Query 042119
Match_columns 286
No_of_seqs 248 out of 1089
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 04:40:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042119.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042119hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fpf_A Mtnas, putative unchara 100.0 1.6E-52 5.4E-57 387.4 21.6 253 17-282 5-264 (298)
2 4gek_A TRNA (CMO5U34)-methyltr 99.7 1.3E-17 4.5E-22 150.8 13.9 126 107-240 51-178 (261)
3 2xvm_A Tellurite resistance pr 99.7 7.9E-16 2.7E-20 130.2 14.7 107 127-240 29-136 (199)
4 3r3h_A O-methyltransferase, SA 99.7 1.1E-16 3.9E-21 142.7 7.6 107 129-241 59-171 (242)
5 3dr5_A Putative O-methyltransf 99.7 4.1E-16 1.4E-20 137.4 10.6 106 130-241 56-164 (221)
6 3ocj_A Putative exported prote 99.6 9E-16 3.1E-20 140.3 12.5 111 127-240 115-227 (305)
7 1pjz_A Thiopurine S-methyltran 99.6 4.6E-16 1.6E-20 134.6 8.9 108 127-238 19-138 (203)
8 3duw_A OMT, O-methyltransferas 99.6 1.7E-15 5.9E-20 131.5 12.5 106 129-241 57-168 (223)
9 3dh0_A SAM dependent methyltra 99.6 4.1E-15 1.4E-19 128.2 14.2 152 125-282 32-193 (219)
10 1xdz_A Methyltransferase GIDB; 99.6 1.8E-15 6.2E-20 133.7 11.1 145 129-282 69-219 (240)
11 3mti_A RRNA methylase; SAM-dep 99.6 6.2E-15 2.1E-19 124.2 13.8 109 127-241 19-136 (185)
12 3e05_A Precorrin-6Y C5,15-meth 99.6 5.2E-15 1.8E-19 127.0 13.5 111 122-240 32-142 (204)
13 3tfw_A Putative O-methyltransf 99.6 4.7E-15 1.6E-19 132.2 13.6 106 129-241 62-171 (248)
14 1jsx_A Glucose-inhibited divis 99.6 7.1E-15 2.4E-19 125.9 13.9 138 130-282 65-205 (207)
15 3ntv_A MW1564 protein; rossman 99.6 2.6E-15 8.8E-20 132.3 11.3 105 129-240 70-176 (232)
16 3njr_A Precorrin-6Y methylase; 99.6 1.1E-14 3.6E-19 126.4 15.0 109 122-241 47-155 (204)
17 1sui_A Caffeoyl-COA O-methyltr 99.6 2.5E-15 8.7E-20 134.3 10.6 105 129-240 78-190 (247)
18 3p9n_A Possible methyltransfer 99.6 2.2E-14 7.6E-19 121.7 15.9 125 113-242 27-155 (189)
19 2gb4_A Thiopurine S-methyltran 99.6 3.9E-15 1.3E-19 133.9 11.8 107 129-239 67-190 (252)
20 3tr6_A O-methyltransferase; ce 99.6 3.5E-15 1.2E-19 129.6 11.1 106 129-241 63-175 (225)
21 3orh_A Guanidinoacetate N-meth 99.6 1.7E-15 5.9E-20 134.2 9.2 110 125-240 55-170 (236)
22 3c3y_A Pfomt, O-methyltransfer 99.6 3.3E-15 1.1E-19 132.5 10.5 107 129-241 69-182 (237)
23 3g89_A Ribosomal RNA small sub 99.6 1E-14 3.5E-19 130.8 13.4 140 129-281 79-228 (249)
24 2o57_A Putative sarcosine dime 99.6 2E-14 6.7E-19 130.1 15.3 109 127-240 79-187 (297)
25 3jwg_A HEN1, methyltransferase 99.6 7.9E-15 2.7E-19 126.8 12.1 109 129-240 28-141 (219)
26 3kkz_A Uncharacterized protein 99.6 1.1E-14 3.9E-19 129.9 13.5 107 128-240 44-150 (267)
27 3lcc_A Putative methyl chlorid 99.6 8.8E-15 3E-19 128.0 12.4 106 129-240 65-171 (235)
28 1nkv_A Hypothetical protein YJ 99.6 5.2E-15 1.8E-19 130.5 10.9 109 126-240 32-140 (256)
29 3hm2_A Precorrin-6Y C5,15-meth 99.6 1.3E-14 4.5E-19 120.7 12.7 108 124-240 19-127 (178)
30 3f4k_A Putative methyltransfer 99.6 8.4E-15 2.9E-19 129.3 12.1 107 128-240 44-150 (257)
31 3c3p_A Methyltransferase; NP_9 99.6 4.6E-15 1.6E-19 128.0 10.1 106 129-241 55-161 (210)
32 3u81_A Catechol O-methyltransf 99.6 5.8E-15 2E-19 128.7 10.7 109 129-241 57-171 (221)
33 3bus_A REBM, methyltransferase 99.6 2.3E-14 7.8E-19 127.7 14.7 114 122-240 53-166 (273)
34 3dlc_A Putative S-adenosyl-L-m 99.6 9.8E-15 3.4E-19 124.8 11.3 108 127-240 41-148 (219)
35 3m70_A Tellurite resistance pr 99.6 4.4E-14 1.5E-18 127.2 16.0 104 129-240 119-223 (286)
36 3eey_A Putative rRNA methylase 99.6 3.1E-14 1.1E-18 121.1 14.1 113 127-241 19-140 (197)
37 3jwh_A HEN1; methyltransferase 99.6 1.6E-14 5.6E-19 124.8 12.2 109 129-240 28-141 (217)
38 3g5t_A Trans-aconitate 3-methy 99.6 1.8E-14 6.1E-19 131.0 12.9 112 123-238 29-147 (299)
39 1y8c_A S-adenosylmethionine-de 99.6 4.6E-14 1.6E-18 122.9 14.9 103 129-239 36-141 (246)
40 1kpg_A CFA synthase;, cyclopro 99.6 2.6E-14 8.8E-19 128.7 13.6 111 123-240 57-168 (287)
41 3cbg_A O-methyltransferase; cy 99.6 9.1E-15 3.1E-19 128.9 10.2 107 129-241 71-183 (232)
42 3hem_A Cyclopropane-fatty-acyl 99.6 4E-14 1.4E-18 128.8 14.5 112 122-240 64-183 (302)
43 1vl5_A Unknown conserved prote 99.6 1.5E-14 5E-19 128.5 11.2 108 126-240 33-140 (260)
44 2p8j_A S-adenosylmethionine-de 99.6 2E-14 6.8E-19 122.9 11.2 106 129-240 22-128 (209)
45 3g2m_A PCZA361.24; SAM-depende 99.5 1.9E-14 6.5E-19 130.8 11.3 106 129-240 81-190 (299)
46 1x19_A CRTF-related protein; m 99.5 1.3E-13 4.5E-18 128.7 17.3 112 123-240 183-295 (359)
47 3dtn_A Putative methyltransfer 99.5 1.8E-14 6E-19 125.6 10.5 106 128-240 42-148 (234)
48 2avd_A Catechol-O-methyltransf 99.5 1.9E-14 6.5E-19 125.2 10.7 106 129-241 68-180 (229)
49 3vc1_A Geranyl diphosphate 2-C 99.5 3E-14 1E-18 130.5 12.0 107 128-240 115-221 (312)
50 1wzn_A SAM-dependent methyltra 99.5 9.2E-14 3.1E-18 122.4 14.4 107 125-239 36-144 (252)
51 3mb5_A SAM-dependent methyltra 99.5 2.4E-14 8.1E-19 126.8 10.4 149 125-282 88-253 (255)
52 3lec_A NADB-rossmann superfami 99.5 5.2E-14 1.8E-18 125.5 12.5 108 128-241 19-126 (230)
53 2fk8_A Methoxy mycolic acid sy 99.5 7.5E-14 2.6E-18 127.7 13.9 111 123-240 83-194 (318)
54 2gpy_A O-methyltransferase; st 99.5 2.9E-14 9.9E-19 124.9 10.4 105 129-240 53-160 (233)
55 3e8s_A Putative SAM dependent 99.5 3.6E-14 1.2E-18 121.9 10.7 99 129-241 51-153 (227)
56 4htf_A S-adenosylmethionine-de 99.5 6.2E-14 2.1E-18 126.2 12.7 107 128-240 66-173 (285)
57 3mgg_A Methyltransferase; NYSG 99.5 7.7E-14 2.6E-18 124.7 13.1 109 128-241 35-143 (276)
58 2a14_A Indolethylamine N-methy 99.5 7.2E-14 2.5E-18 125.3 12.8 110 127-240 52-197 (263)
59 3dp7_A SAM-dependent methyltra 99.5 7.4E-14 2.5E-18 131.1 12.9 107 129-240 178-287 (363)
60 3kr9_A SAM-dependent methyltra 99.5 1.2E-13 4.1E-18 122.8 13.5 109 128-242 13-121 (225)
61 3h2b_A SAM-dependent methyltra 99.5 1.4E-13 4.7E-18 117.4 13.1 99 131-240 42-141 (203)
62 2kw5_A SLR1183 protein; struct 99.5 1.7E-13 6E-18 116.7 13.7 103 129-240 29-131 (202)
63 3ofk_A Nodulation protein S; N 99.5 7.9E-14 2.7E-18 120.0 11.5 105 127-240 48-154 (216)
64 1zx0_A Guanidinoacetate N-meth 99.5 4.1E-14 1.4E-18 124.3 9.8 107 128-240 58-170 (236)
65 3hnr_A Probable methyltransfer 99.5 6.9E-14 2.4E-18 120.6 11.1 101 129-240 44-145 (220)
66 3i53_A O-methyltransferase; CO 99.5 3E-13 1E-17 124.8 16.1 145 128-281 167-331 (332)
67 3ujc_A Phosphoethanolamine N-m 99.5 4.9E-14 1.7E-18 124.4 10.1 111 123-240 48-159 (266)
68 2hnk_A SAM-dependent O-methylt 99.5 5.4E-14 1.8E-18 124.0 10.3 105 129-240 59-181 (239)
69 1xxl_A YCGJ protein; structura 99.5 9.5E-14 3.2E-18 122.2 11.8 108 126-240 17-124 (239)
70 2fca_A TRNA (guanine-N(7)-)-me 99.5 1.6E-13 5.6E-18 119.5 12.8 108 129-240 37-153 (213)
71 1ve3_A Hypothetical protein PH 99.5 3E-13 1E-17 116.7 14.3 105 129-240 37-142 (227)
72 2r3s_A Uncharacterized protein 99.5 1.4E-13 4.6E-18 126.6 12.8 107 129-240 164-271 (335)
73 3pfg_A N-methyltransferase; N, 99.5 2.8E-13 9.7E-18 120.3 14.2 99 129-239 49-150 (263)
74 3g07_A 7SK snRNA methylphospha 99.5 3.3E-14 1.1E-18 129.6 8.2 108 130-240 46-220 (292)
75 1dus_A MJ0882; hypothetical pr 99.5 3.2E-13 1.1E-17 112.9 13.6 112 125-242 47-159 (194)
76 3cgg_A SAM-dependent methyltra 99.5 5.1E-13 1.7E-17 111.8 14.8 138 128-282 44-195 (195)
77 3sm3_A SAM-dependent methyltra 99.5 1.2E-13 4E-18 119.5 10.7 107 129-240 29-141 (235)
78 3dxy_A TRNA (guanine-N(7)-)-me 99.5 9.6E-14 3.3E-18 121.9 10.2 108 129-240 33-150 (218)
79 1l3i_A Precorrin-6Y methyltran 99.5 2.6E-13 8.9E-18 113.3 12.3 106 126-240 29-134 (192)
80 1yzh_A TRNA (guanine-N(7)-)-me 99.5 3.6E-13 1.2E-17 116.5 13.3 109 129-241 40-157 (214)
81 3bxo_A N,N-dimethyltransferase 99.5 4.7E-13 1.6E-17 116.3 14.1 100 129-240 39-141 (239)
82 1nt2_A Fibrillarin-like PRE-rR 99.5 3.2E-13 1.1E-17 117.8 12.8 105 127-240 54-161 (210)
83 4hg2_A Methyltransferase type 99.5 3.6E-14 1.2E-18 128.0 6.6 98 129-240 38-135 (257)
84 1ri5_A MRNA capping enzyme; me 99.5 2.7E-13 9.1E-18 121.7 12.1 109 128-240 62-174 (298)
85 2pxx_A Uncharacterized protein 99.5 2.4E-13 8.3E-18 115.9 10.9 124 105-241 22-160 (215)
86 2ex4_A Adrenal gland protein A 99.5 1.6E-13 5.5E-18 120.6 10.0 106 130-240 79-185 (241)
87 3ou2_A SAM-dependent methyltra 99.5 2.1E-13 7.1E-18 116.8 10.5 102 128-240 44-146 (218)
88 2vdw_A Vaccinia virus capping 99.5 1.8E-13 6.2E-18 126.1 10.8 108 130-241 48-170 (302)
89 3lbf_A Protein-L-isoaspartate 99.5 2.8E-13 9.5E-18 116.3 11.1 105 125-242 72-176 (210)
90 3evz_A Methyltransferase; NYSG 99.5 4.4E-13 1.5E-17 116.6 12.5 148 126-281 51-219 (230)
91 3uwp_A Histone-lysine N-methyl 99.5 9E-13 3.1E-17 126.6 15.7 150 82-240 126-288 (438)
92 2p35_A Trans-aconitate 2-methy 99.5 2.4E-13 8.3E-18 119.8 10.9 109 121-240 24-132 (259)
93 2i62_A Nicotinamide N-methyltr 99.5 4.9E-13 1.7E-17 118.0 12.8 111 127-241 53-199 (265)
94 2ift_A Putative methylase HI07 99.5 2.2E-13 7.4E-18 117.6 10.2 107 130-242 53-165 (201)
95 3g5l_A Putative S-adenosylmeth 99.5 3E-13 1E-17 119.3 11.2 103 128-240 42-145 (253)
96 2ip2_A Probable phenazine-spec 99.5 4.1E-13 1.4E-17 123.8 12.4 107 127-240 165-272 (334)
97 3ggd_A SAM-dependent methyltra 99.5 7.8E-13 2.7E-17 116.1 13.5 104 128-240 54-163 (245)
98 3i9f_A Putative type 11 methyl 99.5 7.7E-13 2.6E-17 109.7 12.7 137 128-281 15-159 (170)
99 3gu3_A Methyltransferase; alph 99.5 2.7E-13 9.1E-18 122.6 10.7 108 128-242 20-128 (284)
100 2yqz_A Hypothetical protein TT 99.4 2.9E-13 9.8E-18 119.4 10.6 105 127-239 36-140 (263)
101 3gnl_A Uncharacterized protein 99.4 5.4E-13 1.8E-17 119.9 12.4 109 128-242 19-127 (244)
102 1tw3_A COMT, carminomycin 4-O- 99.4 9.4E-13 3.2E-17 122.6 14.2 153 126-284 179-358 (360)
103 4df3_A Fibrillarin-like rRNA/T 99.4 3.4E-13 1.1E-17 120.5 10.5 118 114-239 61-181 (233)
104 4fsd_A Arsenic methyltransfera 99.4 2.9E-13 1E-17 128.0 10.7 111 128-240 81-203 (383)
105 3thr_A Glycine N-methyltransfe 99.4 8E-13 2.7E-17 119.0 13.1 108 129-240 56-175 (293)
106 3gjy_A Spermidine synthase; AP 99.4 1.2E-13 4.2E-18 128.5 7.8 145 131-282 90-247 (317)
107 4dzr_A Protein-(glutamine-N5) 99.4 5.4E-14 1.9E-18 119.8 4.9 149 129-284 29-207 (215)
108 2fyt_A Protein arginine N-meth 99.4 7.3E-13 2.5E-17 123.8 12.8 105 128-237 62-168 (340)
109 3r0q_C Probable protein argini 99.4 6.7E-13 2.3E-17 125.6 12.7 106 128-240 61-169 (376)
110 2qe6_A Uncharacterized protein 99.4 8.5E-13 2.9E-17 119.8 12.9 107 130-241 77-197 (274)
111 3cvo_A Methyltransferase-like 99.4 5.7E-13 1.9E-17 116.6 10.7 100 129-240 29-154 (202)
112 3ckk_A TRNA (guanine-N(7)-)-me 99.4 1.1E-12 3.8E-17 116.5 12.8 109 128-240 44-168 (235)
113 3id6_C Fibrillarin-like rRNA/T 99.4 2.8E-12 9.5E-17 114.4 15.4 147 126-282 72-231 (232)
114 3d2l_A SAM-dependent methyltra 99.4 1E-12 3.4E-17 114.6 12.2 102 129-239 32-136 (243)
115 2esr_A Methyltransferase; stru 99.4 6E-13 2.1E-17 111.2 10.2 108 128-241 29-139 (177)
116 3grz_A L11 mtase, ribosomal pr 99.4 7.2E-13 2.5E-17 113.4 10.9 102 128-240 58-159 (205)
117 1xtp_A LMAJ004091AAA; SGPP, st 99.4 1E-12 3.5E-17 115.4 12.2 109 125-240 88-197 (254)
118 3gwz_A MMCR; methyltransferase 99.4 1.9E-12 6.5E-17 121.8 14.7 111 124-240 196-307 (369)
119 3mcz_A O-methyltransferase; ad 99.4 8.1E-13 2.8E-17 122.6 11.8 115 122-240 170-287 (352)
120 2fhp_A Methylase, putative; al 99.4 5.1E-13 1.7E-17 111.9 9.5 108 129-242 43-156 (187)
121 3lpm_A Putative methyltransfer 99.4 2.1E-12 7.2E-17 115.3 13.8 109 127-239 45-175 (259)
122 2yxd_A Probable cobalt-precorr 99.4 2.4E-12 8E-17 106.9 13.2 101 126-240 31-131 (183)
123 3bkx_A SAM-dependent methyltra 99.4 1.3E-12 4.3E-17 116.5 12.2 116 122-240 35-159 (275)
124 3e23_A Uncharacterized protein 99.4 8.5E-13 2.9E-17 113.3 10.6 101 128-241 41-142 (211)
125 2p7i_A Hypothetical protein; p 99.4 6.6E-13 2.3E-17 115.4 10.0 101 129-241 41-142 (250)
126 4a6d_A Hydroxyindole O-methylt 99.4 1.4E-12 4.7E-17 122.3 12.1 147 127-282 176-346 (353)
127 3fzg_A 16S rRNA methylase; met 99.4 2E-13 6.9E-18 118.6 5.9 105 129-240 48-152 (200)
128 2nxc_A L11 mtase, ribosomal pr 99.4 1.7E-12 5.7E-17 116.2 12.1 116 112-240 103-218 (254)
129 1xj5_A Spermidine synthase 1; 99.4 1.3E-12 4.5E-17 122.2 11.7 110 128-240 118-235 (334)
130 2bm8_A Cephalosporin hydroxyla 99.4 3.3E-13 1.1E-17 119.7 7.3 100 129-240 80-187 (236)
131 3l8d_A Methyltransferase; stru 99.4 8.8E-13 3E-17 115.0 9.7 102 129-240 52-153 (242)
132 3dli_A Methyltransferase; PSI- 99.4 3.8E-13 1.3E-17 118.1 7.3 99 129-241 40-141 (240)
133 2fpo_A Methylase YHHF; structu 99.4 1.3E-12 4.6E-17 112.6 10.4 105 130-241 54-161 (202)
134 1qzz_A RDMB, aclacinomycin-10- 99.4 2.9E-12 1E-16 119.7 13.5 111 125-241 177-288 (374)
135 1yb2_A Hypothetical protein TA 99.4 8.2E-13 2.8E-17 119.1 9.4 106 126-241 106-212 (275)
136 1u2z_A Histone-lysine N-methyl 99.4 1.3E-11 4.4E-16 119.4 17.9 113 123-240 235-359 (433)
137 1fbn_A MJ fibrillarin homologu 99.4 6.6E-13 2.3E-17 116.4 8.1 105 125-239 69-177 (230)
138 2pwy_A TRNA (adenine-N(1)-)-me 99.4 1.6E-12 5.3E-17 114.7 10.5 108 125-241 91-199 (258)
139 2ozv_A Hypothetical protein AT 99.4 1.8E-12 6.1E-17 116.4 10.9 110 128-240 34-170 (260)
140 3gdh_A Trimethylguanosine synt 99.4 8.9E-14 3E-18 122.0 2.3 105 129-240 77-181 (241)
141 2pbf_A Protein-L-isoaspartate 99.4 9E-13 3.1E-17 114.6 8.7 106 127-241 77-194 (227)
142 3q7e_A Protein arginine N-meth 99.4 1.4E-12 4.9E-17 122.1 10.6 106 129-239 65-172 (349)
143 2ipx_A RRNA 2'-O-methyltransfe 99.4 2.1E-12 7.1E-17 113.1 11.0 148 125-282 72-232 (233)
144 2g72_A Phenylethanolamine N-me 99.4 2.5E-12 8.6E-17 116.1 11.9 109 129-240 70-215 (289)
145 1nv8_A HEMK protein; class I a 99.4 4.4E-12 1.5E-16 115.7 13.6 106 130-241 123-250 (284)
146 3ccf_A Cyclopropane-fatty-acyl 99.4 1.2E-12 4.2E-17 117.5 9.7 101 127-240 54-154 (279)
147 2b2c_A Spermidine synthase; be 99.4 8.5E-13 2.9E-17 122.5 8.8 110 129-241 107-223 (314)
148 3bkw_A MLL3908 protein, S-aden 99.4 1.2E-12 4.2E-17 114.0 9.4 103 128-240 41-144 (243)
149 1p91_A Ribosomal RNA large sub 99.4 2E-12 6.9E-17 115.2 10.9 119 129-264 84-212 (269)
150 3mq2_A 16S rRNA methyltransfer 99.4 3.6E-13 1.2E-17 116.4 5.8 109 127-240 24-140 (218)
151 1o54_A SAM-dependent O-methylt 99.4 1.3E-12 4.4E-17 117.6 9.7 108 125-241 107-214 (277)
152 3tma_A Methyltransferase; thum 99.4 5.8E-12 2E-16 117.7 14.4 116 124-242 197-319 (354)
153 3m33_A Uncharacterized protein 99.4 1.2E-12 4.1E-17 114.3 9.1 91 129-237 47-139 (226)
154 1ws6_A Methyltransferase; stru 99.4 6.6E-13 2.3E-17 109.4 7.1 102 130-241 41-148 (171)
155 1i1n_A Protein-L-isoaspartate 99.4 1.4E-12 4.7E-17 113.3 9.3 105 128-241 75-183 (226)
156 2yxe_A Protein-L-isoaspartate 99.4 4.7E-12 1.6E-16 109.0 12.5 109 125-243 72-180 (215)
157 2frn_A Hypothetical protein PH 99.4 1.2E-12 4.1E-17 118.8 9.1 104 128-241 123-226 (278)
158 2gs9_A Hypothetical protein TT 99.4 2.5E-12 8.4E-17 110.2 10.6 109 117-241 24-133 (211)
159 3p2e_A 16S rRNA methylase; met 99.4 7.5E-13 2.6E-17 116.7 7.3 105 128-238 22-137 (225)
160 2yvl_A TRMI protein, hypotheti 99.4 3.3E-12 1.1E-16 111.9 11.4 106 125-241 86-191 (248)
161 1i9g_A Hypothetical protein RV 99.4 2.3E-12 7.7E-17 115.5 10.5 110 125-241 94-204 (280)
162 3ege_A Putative methyltransfer 99.4 1.1E-12 3.6E-17 117.1 8.2 100 127-240 31-130 (261)
163 1ixk_A Methyltransferase; open 99.4 4.8E-12 1.6E-16 117.0 12.9 111 127-240 115-246 (315)
164 1mjf_A Spermidine synthase; sp 99.4 1.5E-12 5.2E-17 118.5 9.4 107 129-240 74-193 (281)
165 3adn_A Spermidine synthase; am 99.4 1.3E-12 4.4E-17 120.2 8.9 110 129-240 82-198 (294)
166 3ajd_A Putative methyltransfer 99.4 4.1E-12 1.4E-16 114.9 11.8 110 127-240 80-211 (274)
167 3iv6_A Putative Zn-dependent a 99.4 4.5E-12 1.5E-16 114.9 11.9 107 125-240 40-148 (261)
168 3bgv_A MRNA CAP guanine-N7 met 99.3 6.6E-12 2.3E-16 114.8 12.8 110 129-241 33-156 (313)
169 2vdv_E TRNA (guanine-N(7)-)-me 99.3 4.5E-12 1.5E-16 112.3 11.3 108 129-240 48-173 (246)
170 1dl5_A Protein-L-isoaspartate 99.3 5.4E-12 1.9E-16 116.3 12.0 106 125-240 70-175 (317)
171 1g8a_A Fibrillarin-like PRE-rR 99.3 4E-12 1.4E-16 110.6 10.4 107 126-240 69-178 (227)
172 4dcm_A Ribosomal RNA large sub 99.3 4.6E-12 1.6E-16 120.2 11.2 112 125-240 217-334 (375)
173 2o07_A Spermidine synthase; st 99.3 3.4E-12 1.2E-16 117.8 10.0 109 129-240 94-209 (304)
174 2i7c_A Spermidine synthase; tr 99.3 3.1E-12 1.1E-16 116.6 9.6 112 128-241 76-193 (283)
175 3bwc_A Spermidine synthase; SA 99.3 3.5E-12 1.2E-16 117.3 10.0 111 129-241 94-211 (304)
176 1iy9_A Spermidine synthase; ro 99.3 3.4E-12 1.2E-16 116.0 9.6 111 129-242 74-191 (275)
177 1uir_A Polyamine aminopropyltr 99.3 3.9E-12 1.3E-16 117.6 10.0 150 129-282 76-242 (314)
178 2b3t_A Protein methyltransfera 99.3 7.8E-12 2.7E-16 112.6 11.6 107 129-240 108-238 (276)
179 2igt_A SAM dependent methyltra 99.3 6.7E-12 2.3E-16 117.2 11.4 107 129-240 152-272 (332)
180 2pt6_A Spermidine synthase; tr 99.3 4.8E-12 1.6E-16 117.6 10.2 111 129-242 115-232 (321)
181 2aot_A HMT, histamine N-methyl 99.3 3E-12 1E-16 116.1 8.3 108 129-240 51-172 (292)
182 2y1w_A Histone-arginine methyl 99.3 8.7E-12 3E-16 116.6 11.7 107 127-239 47-154 (348)
183 2avn_A Ubiquinone/menaquinone 99.3 5.2E-12 1.8E-16 112.4 9.6 98 130-240 54-152 (260)
184 1g6q_1 HnRNP arginine N-methyl 99.3 6.8E-12 2.3E-16 116.4 10.6 105 129-238 37-143 (328)
185 1vbf_A 231AA long hypothetical 99.3 1E-11 3.6E-16 107.9 11.0 102 125-241 65-166 (231)
186 1inl_A Spermidine synthase; be 99.3 6.5E-12 2.2E-16 115.2 9.8 110 129-241 89-206 (296)
187 3dmg_A Probable ribosomal RNA 99.3 9.1E-12 3.1E-16 118.4 11.2 105 129-240 232-340 (381)
188 1o9g_A RRNA methyltransferase; 99.3 3.5E-12 1.2E-16 113.0 7.6 109 129-239 50-213 (250)
189 3bzb_A Uncharacterized protein 99.3 2.5E-11 8.5E-16 110.1 13.2 105 129-239 78-204 (281)
190 2b25_A Hypothetical protein; s 99.3 8.1E-12 2.8E-16 115.7 9.1 107 127-240 102-219 (336)
191 3htx_A HEN1; HEN1, small RNA m 99.3 6E-11 2E-15 122.0 16.1 109 129-241 720-835 (950)
192 3a27_A TYW2, uncharacterized p 99.3 1E-11 3.4E-16 112.4 9.1 103 128-240 117-219 (272)
193 3b3j_A Histone-arginine methyl 99.3 1.2E-11 4.3E-16 120.8 10.2 105 128-238 156-261 (480)
194 4hc4_A Protein arginine N-meth 99.3 1.3E-11 4.5E-16 117.3 10.0 103 129-239 82-188 (376)
195 1jg1_A PIMT;, protein-L-isoasp 99.3 2.2E-11 7.6E-16 106.8 10.7 105 126-242 87-191 (235)
196 3lst_A CALO1 methyltransferase 99.3 1E-11 3.5E-16 115.6 8.8 109 123-240 177-286 (348)
197 3sso_A Methyltransferase; macr 99.3 1.2E-11 4E-16 118.5 9.3 99 129-241 215-325 (419)
198 1af7_A Chemotaxis receptor met 99.3 1.9E-11 6.5E-16 111.4 10.4 113 130-243 105-255 (274)
199 2h00_A Methyltransferase 10 do 99.2 6.6E-12 2.2E-16 111.2 6.8 106 130-238 65-190 (254)
200 2qm3_A Predicted methyltransfe 99.2 2E-10 6.9E-15 108.3 16.8 106 127-239 169-277 (373)
201 2b78_A Hypothetical protein SM 99.2 3.6E-11 1.2E-15 114.2 11.3 108 129-241 211-332 (385)
202 2pjd_A Ribosomal RNA small sub 99.2 1.5E-11 5.3E-16 114.5 8.5 107 128-241 194-304 (343)
203 3giw_A Protein of unknown func 99.2 2.5E-11 8.6E-16 110.8 9.5 108 130-240 78-200 (277)
204 3m4x_A NOL1/NOP2/SUN family pr 99.2 4.8E-11 1.6E-15 116.1 11.5 111 127-240 102-234 (456)
205 1r18_A Protein-L-isoaspartate( 99.2 2.2E-11 7.6E-16 106.1 8.1 104 128-241 82-195 (227)
206 2yxl_A PH0851 protein, 450AA l 99.2 1.1E-10 3.6E-15 113.0 12.5 110 127-240 256-389 (450)
207 2cmg_A Spermidine synthase; tr 99.2 1.7E-11 5.7E-16 110.9 6.3 100 129-241 71-172 (262)
208 2frx_A Hypothetical protein YE 99.2 6.6E-11 2.3E-15 115.7 10.8 108 130-240 117-246 (479)
209 1vlm_A SAM-dependent methyltra 99.2 5.3E-11 1.8E-15 103.0 9.1 102 119-240 38-139 (219)
210 4e2x_A TCAB9; kijanose, tetron 99.2 2.4E-11 8.1E-16 115.5 7.3 110 122-241 99-209 (416)
211 3m6w_A RRNA methylase; rRNA me 99.2 8.3E-11 2.8E-15 114.6 11.2 110 127-240 98-229 (464)
212 2yx1_A Hypothetical protein MJ 99.2 5.5E-11 1.9E-15 110.8 9.6 98 129-240 194-291 (336)
213 1wy7_A Hypothetical protein PH 99.2 6.3E-10 2.2E-14 95.0 15.4 104 125-239 44-148 (207)
214 3k6r_A Putative transferase PH 99.2 8.7E-11 3E-15 107.4 10.3 103 128-240 123-225 (278)
215 4dmg_A Putative uncharacterize 99.2 1.3E-10 4.3E-15 111.1 11.6 107 128-241 212-327 (393)
216 2as0_A Hypothetical protein PH 99.2 1.1E-10 3.7E-15 110.8 11.1 109 129-241 216-336 (396)
217 4azs_A Methyltransferase WBDD; 99.2 3.1E-11 1.1E-15 120.1 7.5 103 129-237 65-170 (569)
218 1ej0_A FTSJ; methyltransferase 99.1 8.6E-11 2.9E-15 96.1 8.2 137 128-282 20-178 (180)
219 3tm4_A TRNA (guanine N2-)-meth 99.1 1.9E-10 6.5E-15 108.6 11.7 107 128-238 215-328 (373)
220 1sqg_A SUN protein, FMU protei 99.1 2.4E-10 8.2E-15 109.8 12.5 109 127-240 243-374 (429)
221 3c0k_A UPF0064 protein YCCW; P 99.1 1.8E-10 6E-15 109.4 11.2 109 129-241 219-340 (396)
222 3frh_A 16S rRNA methylase; met 99.1 1.8E-10 6E-15 103.5 10.2 102 129-240 104-206 (253)
223 3cc8_A Putative methyltransfer 99.1 1.1E-10 3.6E-15 100.3 8.5 98 129-240 31-130 (230)
224 3bt7_A TRNA (uracil-5-)-methyl 99.1 1.4E-10 4.7E-15 109.4 9.2 99 130-241 213-327 (369)
225 3reo_A (ISO)eugenol O-methyltr 99.1 1.4E-10 4.8E-15 109.1 9.2 99 128-240 201-300 (368)
226 3p9c_A Caffeic acid O-methyltr 99.1 1.9E-10 6.6E-15 108.1 9.8 99 128-240 199-298 (364)
227 3v97_A Ribosomal RNA large sub 99.1 2.9E-10 1E-14 115.9 11.7 108 129-241 538-658 (703)
228 1zq9_A Probable dimethyladenos 99.1 1.8E-10 6.2E-15 104.9 9.1 78 125-209 23-100 (285)
229 3lcv_B Sisomicin-gentamicin re 99.1 8.7E-11 3E-15 106.6 6.8 105 129-240 131-236 (281)
230 2plw_A Ribosomal RNA methyltra 99.1 4.7E-10 1.6E-14 95.2 11.0 134 128-282 20-196 (201)
231 1wxx_A TT1595, hypothetical pr 99.1 2.3E-10 7.9E-15 108.2 9.8 106 130-241 209-326 (382)
232 1fp1_D Isoliquiritigenin 2'-O- 99.1 2E-10 6.9E-15 107.8 8.7 99 128-240 207-306 (372)
233 3q87_B N6 adenine specific DNA 99.1 1.9E-10 6.5E-15 96.4 7.5 94 129-240 22-123 (170)
234 1fp2_A Isoflavone O-methyltran 99.1 2.4E-10 8.4E-15 106.3 8.7 99 128-240 186-288 (352)
235 2zfu_A Nucleomethylin, cerebra 99.1 3.2E-10 1.1E-14 97.4 8.4 120 129-282 66-191 (215)
236 2qfm_A Spermine synthase; sper 99.1 3.3E-10 1.1E-14 107.1 9.2 110 129-241 187-315 (364)
237 2jjq_A Uncharacterized RNA met 99.0 1.3E-09 4.6E-14 104.9 12.6 99 128-240 288-387 (425)
238 3opn_A Putative hemolysin; str 99.0 3.7E-11 1.3E-15 106.6 1.5 103 123-239 29-136 (232)
239 3o4f_A Spermidine synthase; am 99.0 6.8E-10 2.3E-14 102.2 9.7 111 129-241 82-199 (294)
240 2dul_A N(2),N(2)-dimethylguano 99.0 4.4E-10 1.5E-14 106.7 8.6 102 130-240 47-164 (378)
241 2b9e_A NOL1/NOP2/SUN domain fa 99.0 2.4E-09 8E-14 99.1 13.0 110 127-240 99-234 (309)
242 2h1r_A Dimethyladenosine trans 99.0 1.2E-09 4.1E-14 100.2 10.8 76 126-209 38-113 (299)
243 2ld4_A Anamorsin; methyltransf 99.0 1.7E-10 5.7E-15 96.4 4.3 92 125-240 7-101 (176)
244 1ne2_A Hypothetical protein TA 99.0 1.9E-09 6.5E-14 91.7 10.9 99 127-240 48-147 (200)
245 3axs_A Probable N(2),N(2)-dime 99.0 5.9E-10 2E-14 106.5 8.5 104 129-240 51-158 (392)
246 3dou_A Ribosomal RNA large sub 99.0 1.6E-09 5.4E-14 93.0 9.9 133 128-281 23-180 (191)
247 3hp7_A Hemolysin, putative; st 99.0 6.3E-10 2.2E-14 102.3 6.8 104 122-239 76-184 (291)
248 2xyq_A Putative 2'-O-methyl tr 99.0 2E-09 6.8E-14 98.9 9.8 135 127-281 60-210 (290)
249 2nyu_A Putative ribosomal RNA 99.0 1.6E-09 5.4E-14 91.4 8.3 99 128-241 20-146 (196)
250 2wk1_A NOVP; transferase, O-me 99.0 1.4E-09 4.8E-14 99.5 8.5 108 129-241 105-245 (282)
251 1zg3_A Isoflavanone 4'-O-methy 98.9 1.5E-09 5.2E-14 101.1 8.8 98 129-240 192-293 (358)
252 1uwv_A 23S rRNA (uracil-5-)-me 98.9 5.5E-09 1.9E-13 100.5 12.6 101 127-239 283-388 (433)
253 3ll7_A Putative methyltransfer 98.9 1.7E-09 5.7E-14 103.9 8.5 75 129-209 92-170 (410)
254 1m6y_A S-adenosyl-methyltransf 98.9 6.3E-09 2.2E-13 95.9 10.0 79 127-210 23-106 (301)
255 3gru_A Dimethyladenosine trans 98.8 2.1E-08 7.3E-13 92.2 12.4 80 122-209 42-121 (295)
256 2r6z_A UPF0341 protein in RSP 98.8 1.5E-09 5.2E-14 97.8 4.6 78 128-210 81-169 (258)
257 2qy6_A UPF0209 protein YFCK; s 98.8 7.3E-09 2.5E-13 93.4 9.1 113 129-242 59-215 (257)
258 2oxt_A Nucleoside-2'-O-methylt 98.8 6.2E-10 2.1E-14 100.8 1.2 106 126-240 70-185 (265)
259 2f8l_A Hypothetical protein LM 98.8 8.8E-09 3E-13 95.7 8.5 110 128-243 128-259 (344)
260 3k0b_A Predicted N6-adenine-sp 98.8 6.5E-08 2.2E-12 92.2 14.2 116 123-241 194-351 (393)
261 2wa2_A Non-structural protein 98.8 1.1E-09 3.9E-14 99.6 1.8 105 127-240 79-193 (276)
262 2p41_A Type II methyltransfera 98.8 3.5E-09 1.2E-13 97.7 4.1 104 127-241 79-192 (305)
263 3ldg_A Putative uncharacterize 98.8 7.6E-08 2.6E-12 91.5 13.4 116 123-241 187-344 (384)
264 3ldu_A Putative methylase; str 98.7 4.4E-08 1.5E-12 93.1 11.0 115 123-240 188-344 (385)
265 1qam_A ERMC' methyltransferase 98.7 1.1E-07 3.8E-12 84.4 11.8 67 125-199 25-91 (244)
266 3c6k_A Spermine synthase; sper 98.7 2.9E-08 1E-12 94.2 8.4 109 129-240 204-331 (381)
267 3tqs_A Ribosomal RNA small sub 98.7 5.2E-08 1.8E-12 87.7 9.5 66 125-198 24-89 (255)
268 1yub_A Ermam, rRNA methyltrans 98.6 1.2E-09 4.3E-14 96.7 -2.6 106 125-239 24-144 (245)
269 2ih2_A Modification methylase 98.6 5.2E-08 1.8E-12 92.0 7.8 101 129-242 38-166 (421)
270 3fut_A Dimethyladenosine trans 98.6 1.6E-07 5.6E-12 85.2 10.5 75 124-208 41-116 (271)
271 2okc_A Type I restriction enzy 98.6 7.1E-08 2.4E-12 92.9 6.9 114 127-243 168-310 (445)
272 2oyr_A UPF0341 protein YHIQ; a 98.5 8.9E-08 3E-12 86.4 6.0 81 127-211 83-173 (258)
273 3ua3_A Protein arginine N-meth 98.4 7.6E-07 2.6E-11 90.3 10.8 104 131-237 410-531 (745)
274 3ftd_A Dimethyladenosine trans 98.4 7.5E-07 2.6E-11 79.6 9.6 103 124-239 25-130 (249)
275 3v97_A Ribosomal RNA large sub 98.4 1.2E-06 3.9E-11 89.4 12.0 116 123-240 183-347 (703)
276 4fzv_A Putative methyltransfer 98.4 1.2E-06 4.1E-11 82.6 10.5 112 127-240 145-284 (359)
277 4gqb_A Protein arginine N-meth 98.4 1.1E-06 3.7E-11 88.6 10.3 102 130-237 357-464 (637)
278 1qyr_A KSGA, high level kasuga 98.4 3.7E-07 1.3E-11 81.9 5.8 65 125-197 16-80 (252)
279 3uzu_A Ribosomal RNA small sub 98.4 7.5E-07 2.6E-11 81.1 7.7 68 124-198 36-104 (279)
280 2ar0_A M.ecoki, type I restric 98.2 3.1E-06 1.1E-10 83.7 9.2 115 127-243 166-315 (541)
281 2k4m_A TR8_protein, UPF0146 pr 98.2 1.8E-06 6.2E-11 71.6 6.0 87 129-240 34-121 (153)
282 3s2e_A Zinc-containing alcohol 98.1 5.7E-06 1.9E-10 76.2 7.0 107 120-240 156-263 (340)
283 1pl8_A Human sorbitol dehydrog 98.0 9.8E-06 3.4E-10 75.2 7.5 102 122-240 163-273 (356)
284 1wg8_A Predicted S-adenosylmet 98.0 1E-05 3.6E-10 73.8 7.3 76 127-212 19-99 (285)
285 4ej6_A Putative zinc-binding d 98.0 6.3E-06 2.1E-10 77.2 5.8 105 122-240 174-284 (370)
286 2h6e_A ADH-4, D-arabinose 1-de 98.0 5.9E-06 2E-10 76.3 5.3 100 127-240 168-269 (344)
287 3fpc_A NADP-dependent alcohol 97.9 4.5E-06 1.5E-10 77.3 4.1 105 122-240 158-266 (352)
288 3two_A Mannitol dehydrogenase; 97.9 1.3E-05 4.6E-10 74.0 7.1 100 120-240 166-265 (348)
289 3m6i_A L-arabinitol 4-dehydrog 97.9 3.1E-05 1.1E-09 71.9 9.1 104 122-240 171-283 (363)
290 1kol_A Formaldehyde dehydrogen 97.9 8.2E-06 2.8E-10 76.8 4.7 111 122-240 177-300 (398)
291 3lkd_A Type I restriction-modi 97.9 4.2E-05 1.4E-09 75.7 9.8 129 113-243 203-361 (542)
292 1f8f_A Benzyl alcohol dehydrog 97.9 1.2E-05 4E-10 75.1 5.4 103 124-240 184-289 (371)
293 1uuf_A YAHK, zinc-type alcohol 97.8 9.4E-06 3.2E-10 76.0 4.4 103 121-240 185-288 (369)
294 1rjw_A ADH-HT, alcohol dehydro 97.8 2E-05 7E-10 72.6 6.6 105 121-240 155-261 (339)
295 2dph_A Formaldehyde dismutase; 97.8 6.2E-06 2.1E-10 77.8 2.9 109 122-240 177-299 (398)
296 1e3j_A NADP(H)-dependent ketos 97.8 5.3E-05 1.8E-09 70.1 9.1 103 122-240 160-271 (352)
297 4eez_A Alcohol dehydrogenase 1 97.8 3E-05 1E-09 71.2 6.9 106 122-240 155-263 (348)
298 3khk_A Type I restriction-modi 97.8 1.6E-05 5.3E-10 78.8 4.9 110 132-243 246-398 (544)
299 3jv7_A ADH-A; dehydrogenase, n 97.8 2E-05 6.8E-10 72.6 5.1 108 120-241 159-271 (345)
300 1vj0_A Alcohol dehydrogenase, 97.7 2E-05 6.9E-10 73.9 4.9 103 122-241 186-299 (380)
301 2vhw_A Alanine dehydrogenase; 97.7 1.8E-05 6E-10 74.7 4.1 103 129-240 166-268 (377)
302 3uog_A Alcohol dehydrogenase; 97.7 1.8E-05 6.1E-10 73.7 3.5 99 125-241 184-288 (363)
303 2cf5_A Atccad5, CAD, cinnamyl 97.7 3.4E-05 1.1E-09 71.7 5.2 105 121-240 170-275 (357)
304 1piw_A Hypothetical zinc-type 97.7 9.7E-06 3.3E-10 75.4 1.4 106 121-240 170-276 (360)
305 1e3i_A Alcohol dehydrogenase, 97.7 4.5E-05 1.5E-09 71.2 6.0 100 125-240 190-297 (376)
306 3ip1_A Alcohol dehydrogenase, 97.7 4.2E-05 1.5E-09 72.3 5.6 105 127-240 210-318 (404)
307 1yqd_A Sinapyl alcohol dehydro 97.7 6.4E-05 2.2E-09 70.1 6.8 105 121-240 177-282 (366)
308 3fwz_A Inner membrane protein 97.7 0.00023 7.8E-09 57.2 9.2 95 131-240 7-105 (140)
309 2dpo_A L-gulonate 3-dehydrogen 97.6 0.00023 7.8E-09 65.8 10.3 100 131-239 6-122 (319)
310 3tqh_A Quinone oxidoreductase; 97.6 0.00018 6.3E-09 65.5 9.6 101 121-240 143-245 (321)
311 3goh_A Alcohol dehydrogenase, 97.6 5.4E-05 1.8E-09 68.8 6.0 96 122-240 134-229 (315)
312 3uko_A Alcohol dehydrogenase c 97.6 2.8E-05 9.7E-10 72.7 4.2 103 124-240 187-295 (378)
313 1p0f_A NADP-dependent alcohol 97.6 4.2E-05 1.4E-09 71.3 5.3 100 125-240 186-293 (373)
314 2c0c_A Zinc binding alcohol de 97.6 7.1E-05 2.4E-09 69.7 6.8 98 126-240 159-261 (362)
315 1pqw_A Polyketide synthase; ro 97.6 3.5E-05 1.2E-09 65.1 4.3 99 126-241 34-138 (198)
316 3p2y_A Alanine dehydrogenase/p 97.6 1.8E-05 6.3E-10 75.0 2.7 100 129-240 182-302 (381)
317 4dio_A NAD(P) transhydrogenase 97.6 2.2E-05 7.7E-10 75.0 3.3 100 129-240 188-312 (405)
318 3tos_A CALS11; methyltransfera 97.6 0.00027 9.3E-09 63.6 10.0 140 98-241 36-218 (257)
319 1cdo_A Alcohol dehydrogenase; 97.6 6.1E-05 2.1E-09 70.2 5.9 100 125-240 187-294 (374)
320 4a2c_A Galactitol-1-phosphate 97.6 8E-05 2.7E-09 68.3 6.6 105 122-240 152-260 (346)
321 4dvj_A Putative zinc-dependent 97.6 8.1E-05 2.8E-09 69.4 6.6 95 130-239 171-269 (363)
322 3s1s_A Restriction endonucleas 97.6 0.00013 4.3E-09 75.3 8.4 111 129-243 320-468 (878)
323 2d8a_A PH0655, probable L-thre 97.6 3.6E-05 1.2E-09 71.1 4.0 104 122-240 160-267 (348)
324 3qwb_A Probable quinone oxidor 97.6 5.4E-05 1.8E-09 69.4 5.0 97 127-240 145-247 (334)
325 4auk_A Ribosomal RNA large sub 97.6 0.00012 4.2E-09 69.1 7.3 88 128-233 209-296 (375)
326 4b7c_A Probable oxidoreductase 97.6 6.1E-05 2.1E-09 69.0 5.2 101 124-240 143-248 (336)
327 3jyn_A Quinone oxidoreductase; 97.6 3.8E-05 1.3E-09 70.3 3.7 98 126-240 136-239 (325)
328 2jhf_A Alcohol dehydrogenase E 97.5 8.7E-05 3E-09 69.2 6.0 100 125-240 186-293 (374)
329 4eye_A Probable oxidoreductase 97.5 5.8E-05 2E-09 69.7 4.5 100 124-240 153-257 (342)
330 1pjc_A Protein (L-alanine dehy 97.5 4.7E-05 1.6E-09 71.3 3.8 103 130-241 166-268 (361)
331 2fzw_A Alcohol dehydrogenase c 97.5 8.3E-05 2.8E-09 69.2 5.4 100 125-240 185-292 (373)
332 3gms_A Putative NADPH:quinone 97.5 4.3E-05 1.5E-09 70.3 3.3 100 124-240 138-243 (340)
333 1f0y_A HCDH, L-3-hydroxyacyl-C 97.5 0.00063 2.2E-08 61.5 10.8 99 131-238 15-134 (302)
334 2b5w_A Glucose dehydrogenase; 97.5 6.5E-05 2.2E-09 69.7 4.2 99 127-240 163-273 (357)
335 1iz0_A Quinone oxidoreductase; 97.5 0.00016 5.5E-09 65.3 6.7 95 128-240 123-218 (302)
336 3c85_A Putative glutathione-re 97.4 0.00056 1.9E-08 57.0 9.1 96 130-240 38-139 (183)
337 2hcy_A Alcohol dehydrogenase 1 97.4 0.00025 8.7E-09 65.3 7.5 104 121-240 160-269 (347)
338 2eih_A Alcohol dehydrogenase; 97.4 0.00014 4.7E-09 67.0 5.8 97 127-240 163-265 (343)
339 4dup_A Quinone oxidoreductase; 97.4 0.00011 3.8E-09 68.0 5.1 101 125-240 162-265 (353)
340 3gaz_A Alcohol dehydrogenase s 97.4 0.00014 4.7E-09 67.1 5.7 99 124-240 144-246 (343)
341 3tka_A Ribosomal RNA small sub 97.4 0.00016 5.6E-09 67.5 6.1 77 127-210 54-136 (347)
342 3fbg_A Putative arginate lyase 97.4 0.00018 6.2E-09 66.4 6.3 94 130-239 150-247 (346)
343 2eez_A Alanine dehydrogenase; 97.4 0.00013 4.6E-09 68.3 5.1 103 129-240 164-266 (369)
344 4e12_A Diketoreductase; oxidor 97.4 0.0005 1.7E-08 61.8 8.7 99 132-239 5-120 (283)
345 3nx4_A Putative oxidoreductase 97.4 0.00011 3.9E-09 66.8 4.5 98 125-240 140-241 (324)
346 2vn8_A Reticulon-4-interacting 97.4 0.00016 5.5E-09 67.4 5.5 99 128-240 181-280 (375)
347 2j3h_A NADP-dependent oxidored 97.4 0.00027 9.4E-09 64.8 7.0 100 125-240 150-255 (345)
348 1jvb_A NAD(H)-dependent alcoho 97.4 0.0001 3.5E-09 68.0 4.1 105 121-240 161-271 (347)
349 1v3u_A Leukotriene B4 12- hydr 97.3 0.00016 5.5E-09 66.1 5.1 99 125-240 140-244 (333)
350 3krt_A Crotonyl COA reductase; 97.3 0.00013 4.5E-09 70.0 4.5 100 126-240 224-344 (456)
351 1gu7_A Enoyl-[acyl-carrier-pro 97.3 0.00016 5.5E-09 66.9 4.7 108 122-240 157-275 (364)
352 4a0s_A Octenoyl-COA reductase/ 97.3 0.0003 1E-08 67.1 6.8 100 126-240 216-336 (447)
353 3evf_A RNA-directed RNA polyme 97.3 0.00057 2E-08 62.0 8.2 112 125-242 69-186 (277)
354 1xa0_A Putative NADPH dependen 97.3 0.00014 4.9E-09 66.3 4.2 100 125-240 143-246 (328)
355 2g1u_A Hypothetical protein TM 97.3 0.00042 1.4E-08 56.4 6.6 98 129-240 17-118 (155)
356 2j8z_A Quinone oxidoreductase; 97.3 0.00019 6.6E-09 66.4 4.8 99 125-240 157-261 (354)
357 2dq4_A L-threonine 3-dehydroge 97.3 5.8E-05 2E-09 69.5 1.2 103 122-240 156-262 (343)
358 2zig_A TTHA0409, putative modi 97.3 0.00074 2.5E-08 61.3 8.5 48 129-180 234-281 (297)
359 1wly_A CAAR, 2-haloacrylate re 97.3 0.00022 7.4E-09 65.3 4.9 99 125-240 140-244 (333)
360 3ado_A Lambda-crystallin; L-gu 97.3 0.0017 5.7E-08 60.1 10.8 102 130-240 5-123 (319)
361 1yb5_A Quinone oxidoreductase; 97.2 0.00026 9E-09 65.6 5.1 99 125-240 165-269 (351)
362 1qor_A Quinone oxidoreductase; 97.2 0.00021 7.2E-09 65.1 4.0 99 125-240 135-239 (327)
363 1lss_A TRK system potassium up 97.2 0.0041 1.4E-07 48.6 11.0 95 131-240 4-102 (140)
364 1zcj_A Peroxisomal bifunctiona 97.2 0.0024 8.2E-08 61.7 11.5 98 131-238 37-148 (463)
365 3mog_A Probable 3-hydroxybutyr 97.2 0.0011 3.9E-08 64.5 9.3 99 131-239 5-119 (483)
366 3k6j_A Protein F01G10.3, confi 97.2 0.0031 1.1E-07 61.1 12.2 100 130-239 53-165 (460)
367 1l7d_A Nicotinamide nucleotide 97.2 0.0002 6.7E-09 67.6 3.5 99 130-240 171-294 (384)
368 1ldn_A L-lactate dehydrogenase 97.2 0.0044 1.5E-07 56.8 12.5 105 130-239 5-122 (316)
369 3gcz_A Polyprotein; flavivirus 97.2 0.00024 8.1E-09 64.7 3.8 111 124-242 84-203 (282)
370 3ggo_A Prephenate dehydrogenas 97.1 0.0015 5.3E-08 59.8 9.3 92 131-239 33-127 (314)
371 1x13_A NAD(P) transhydrogenase 97.1 0.00015 5.1E-09 69.1 2.5 99 129-240 170-292 (401)
372 2cdc_A Glucose dehydrogenase g 97.1 0.00047 1.6E-08 64.0 5.8 92 131-240 181-278 (366)
373 2zb4_A Prostaglandin reductase 97.1 0.0004 1.4E-08 64.1 5.3 101 124-240 152-260 (357)
374 3pi7_A NADH oxidoreductase; gr 97.1 0.00016 5.6E-09 66.7 2.6 97 129-240 162-263 (349)
375 1h2b_A Alcohol dehydrogenase; 97.1 0.00022 7.6E-09 66.1 3.5 105 121-240 175-285 (359)
376 1tt7_A YHFP; alcohol dehydroge 97.1 0.00018 6.3E-09 65.6 2.9 99 125-240 144-247 (330)
377 3llv_A Exopolyphosphatase-rela 97.1 0.0028 9.7E-08 50.3 9.5 95 131-241 6-104 (141)
378 1id1_A Putative potassium chan 97.1 0.0031 1.1E-07 51.0 9.7 98 131-240 3-105 (153)
379 1zsy_A Mitochondrial 2-enoyl t 97.1 0.00091 3.1E-08 61.8 7.0 101 126-240 163-270 (357)
380 3ce6_A Adenosylhomocysteinase; 97.1 0.00044 1.5E-08 67.7 4.9 90 128-240 271-361 (494)
381 2uyo_A Hypothetical protein ML 97.0 0.0051 1.7E-07 56.5 11.6 107 130-240 102-218 (310)
382 3gqv_A Enoyl reductase; medium 96.9 0.00095 3.2E-08 62.2 6.0 97 129-240 163-263 (371)
383 3l9w_A Glutathione-regulated p 96.9 0.0031 1.1E-07 60.1 8.9 96 130-240 3-102 (413)
384 2g5c_A Prephenate dehydrogenas 96.8 0.0052 1.8E-07 54.5 9.4 91 132-239 2-95 (281)
385 3lkz_A Non-structural protein 96.8 0.0048 1.6E-07 56.6 9.1 109 124-240 88-204 (321)
386 2v6b_A L-LDH, L-lactate dehydr 96.8 0.0056 1.9E-07 55.8 9.7 100 132-239 1-115 (304)
387 2f1k_A Prephenate dehydrogenas 96.8 0.0071 2.4E-07 53.5 10.0 89 132-238 1-89 (279)
388 3gg2_A Sugar dehydrogenase, UD 96.8 0.004 1.4E-07 60.0 8.9 101 132-240 3-122 (450)
389 1zej_A HBD-9, 3-hydroxyacyl-CO 96.7 0.0022 7.5E-08 58.5 6.6 97 129-239 10-106 (293)
390 2ew2_A 2-dehydropantoate 2-red 96.7 0.011 3.7E-07 52.7 10.9 94 132-239 4-107 (316)
391 3l4b_C TRKA K+ channel protien 96.7 0.008 2.7E-07 51.4 9.5 95 132-240 1-99 (218)
392 3zwc_A Peroxisomal bifunctiona 96.7 0.0077 2.6E-07 61.7 10.8 100 132-240 317-429 (742)
393 3pvc_A TRNA 5-methylaminomethy 96.7 0.0015 5.3E-08 65.7 5.4 129 107-240 27-211 (689)
394 2y0c_A BCEC, UDP-glucose dehyd 96.6 0.0037 1.3E-07 60.7 7.7 104 129-240 6-128 (478)
395 1lld_A L-lactate dehydrogenase 96.6 0.015 5.1E-07 52.6 11.3 103 129-239 5-123 (319)
396 3p8z_A Mtase, non-structural p 96.6 0.016 5.6E-07 51.6 11.0 109 124-240 72-186 (267)
397 3vyw_A MNMC2; tRNA wobble urid 96.6 0.0035 1.2E-07 57.7 7.0 114 129-243 95-229 (308)
398 3c24_A Putative oxidoreductase 96.6 0.0062 2.1E-07 54.4 8.5 86 132-238 12-99 (286)
399 1ez4_A Lactate dehydrogenase; 96.6 0.01 3.4E-07 54.6 10.0 106 130-240 4-121 (318)
400 3g79_A NDP-N-acetyl-D-galactos 96.6 0.0071 2.4E-07 58.9 9.4 104 129-240 16-147 (478)
401 4a7p_A UDP-glucose dehydrogena 96.6 0.0029 9.8E-08 61.1 6.5 103 130-240 7-129 (446)
402 3d0o_A L-LDH 1, L-lactate dehy 96.6 0.019 6.5E-07 52.6 11.6 106 130-240 5-123 (317)
403 2zqz_A L-LDH, L-lactate dehydr 96.6 0.009 3.1E-07 55.2 9.4 108 128-240 6-125 (326)
404 2wtb_A MFP2, fatty acid multif 96.5 0.0074 2.5E-07 61.6 9.5 98 132-239 313-426 (725)
405 3b1f_A Putative prephenate deh 96.5 0.0067 2.3E-07 54.1 8.2 92 131-238 6-99 (290)
406 4e21_A 6-phosphogluconate dehy 96.5 0.0045 1.6E-07 57.9 7.3 94 130-240 21-115 (358)
407 1y6j_A L-lactate dehydrogenase 96.5 0.0046 1.6E-07 56.8 7.2 106 129-240 5-123 (318)
408 2efj_A 3,7-dimethylxanthine me 96.5 0.012 4E-07 55.8 10.1 106 131-240 53-225 (384)
409 4a27_A Synaptic vesicle membra 96.5 0.0011 3.9E-08 61.0 3.0 99 125-240 137-238 (349)
410 1mv8_A GMD, GDP-mannose 6-dehy 96.5 0.009 3.1E-07 57.0 9.3 101 132-240 1-123 (436)
411 1pzg_A LDH, lactate dehydrogen 96.5 0.01 3.4E-07 54.8 9.2 104 129-240 7-132 (331)
412 2rir_A Dipicolinate synthase, 96.5 0.0075 2.6E-07 54.6 8.2 92 129-240 155-246 (300)
413 1i4w_A Mitochondrial replicati 96.5 0.0067 2.3E-07 56.9 8.0 61 130-197 58-118 (353)
414 2xxj_A L-LDH, L-lactate dehydr 96.5 0.017 5.9E-07 52.8 10.7 103 132-240 1-116 (310)
415 3pid_A UDP-glucose 6-dehydroge 96.4 0.008 2.7E-07 57.8 8.5 100 130-240 35-153 (432)
416 2hjr_A Malate dehydrogenase; m 96.4 0.019 6.4E-07 52.9 10.7 101 131-240 14-131 (328)
417 3d4o_A Dipicolinate synthase s 96.4 0.011 3.7E-07 53.4 8.9 92 129-240 153-244 (293)
418 1a5z_A L-lactate dehydrogenase 96.4 0.02 7E-07 52.3 10.5 100 132-239 1-115 (319)
419 2aef_A Calcium-gated potassium 96.4 0.014 4.7E-07 50.4 9.0 95 129-240 7-105 (234)
420 3pqe_A L-LDH, L-lactate dehydr 96.4 0.03 1E-06 51.8 11.6 108 129-240 3-122 (326)
421 3k96_A Glycerol-3-phosphate de 96.3 0.0097 3.3E-07 55.5 8.4 99 130-239 28-132 (356)
422 1t2d_A LDH-P, L-lactate dehydr 96.3 0.024 8.2E-07 52.1 10.9 102 130-240 3-126 (322)
423 3b5i_A S-adenosyl-L-methionine 96.3 0.014 4.8E-07 55.1 9.4 109 131-240 53-225 (374)
424 2i6t_A Ubiquitin-conjugating e 96.3 0.011 3.7E-07 54.1 8.3 101 129-239 12-124 (303)
425 1wdk_A Fatty oxidation complex 96.3 0.0071 2.4E-07 61.6 7.7 101 129-239 312-428 (715)
426 4ezb_A Uncharacterized conserv 96.3 0.0093 3.2E-07 54.5 7.7 92 131-240 24-121 (317)
427 4gwg_A 6-phosphogluconate dehy 96.3 0.0063 2.2E-07 59.3 6.9 99 131-240 4-103 (484)
428 3iup_A Putative NADPH:quinone 96.3 0.0011 3.7E-08 62.0 1.4 75 129-210 169-248 (379)
429 2hmt_A YUAA protein; RCK, KTN, 96.2 0.0071 2.4E-07 47.3 5.8 95 131-240 6-104 (144)
430 3ojo_A CAP5O; rossmann fold, c 96.2 0.02 7E-07 54.9 10.1 100 129-240 9-129 (431)
431 3ic5_A Putative saccharopine d 96.2 0.027 9.3E-07 42.3 8.8 70 130-210 4-77 (118)
432 1bg6_A N-(1-D-carboxylethyl)-L 96.2 0.018 6.2E-07 52.4 9.2 96 131-239 4-108 (359)
433 2ewd_A Lactate dehydrogenase,; 96.2 0.023 7.8E-07 51.8 9.8 102 130-240 3-121 (317)
434 3r24_A NSP16, 2'-O-methyl tran 96.1 0.03 1E-06 51.4 10.1 99 128-243 107-220 (344)
435 1g60_A Adenine-specific methyl 96.1 0.0098 3.4E-07 52.7 6.8 48 129-180 211-258 (260)
436 3lk7_A UDP-N-acetylmuramoylala 96.1 0.03 1E-06 53.5 10.6 75 130-213 8-83 (451)
437 2px2_A Genome polyprotein [con 96.1 0.017 5.7E-07 52.0 8.0 136 125-276 68-233 (269)
438 3tri_A Pyrroline-5-carboxylate 96.0 0.012 4.2E-07 52.8 7.2 93 131-243 3-100 (280)
439 2cvz_A Dehydrogenase, 3-hydrox 96.0 0.015 5E-07 51.5 7.6 88 132-239 2-89 (289)
440 3gvp_A Adenosylhomocysteinase 96.0 0.0067 2.3E-07 58.3 5.6 111 109-243 196-309 (435)
441 3ktd_A Prephenate dehydrogenas 96.0 0.0082 2.8E-07 55.9 6.1 91 131-238 8-99 (341)
442 3vtf_A UDP-glucose 6-dehydroge 96.0 0.0099 3.4E-07 57.3 6.8 101 132-240 22-144 (444)
443 2h78_A Hibadh, 3-hydroxyisobut 96.0 0.014 4.8E-07 52.3 7.5 89 132-239 4-96 (302)
444 3eld_A Methyltransferase; flav 96.0 0.0087 3E-07 54.8 6.0 121 111-242 66-193 (300)
445 1m6e_X S-adenosyl-L-methionnin 96.0 0.0097 3.3E-07 55.9 6.5 110 130-240 51-209 (359)
446 3g0o_A 3-hydroxyisobutyrate de 96.0 0.01 3.5E-07 53.5 6.5 93 130-240 6-102 (303)
447 2o3j_A UDP-glucose 6-dehydroge 96.0 0.021 7.3E-07 55.3 9.2 102 132-240 10-135 (481)
448 3n58_A Adenosylhomocysteinase; 96.0 0.0056 1.9E-07 59.2 4.9 113 108-243 222-336 (464)
449 4dll_A 2-hydroxy-3-oxopropiona 96.0 0.026 8.9E-07 51.4 9.1 92 130-240 30-124 (320)
450 2zyd_A 6-phosphogluconate dehy 95.9 0.014 4.8E-07 56.7 7.5 97 130-238 14-111 (480)
451 1hyh_A L-hicdh, L-2-hydroxyiso 95.9 0.037 1.3E-06 50.2 9.8 100 132-238 2-120 (309)
452 3gt0_A Pyrroline-5-carboxylate 95.9 0.0073 2.5E-07 52.8 4.9 87 132-237 3-94 (247)
453 3d1l_A Putative NADP oxidoredu 95.9 0.022 7.6E-07 50.0 8.0 90 131-239 10-101 (266)
454 1oju_A MDH, malate dehydrogena 95.9 0.057 2E-06 49.1 10.9 104 132-240 1-118 (294)
455 3vku_A L-LDH, L-lactate dehydr 95.9 0.028 9.4E-07 52.0 8.8 106 129-240 7-125 (326)
456 1dlj_A UDP-glucose dehydrogena 95.8 0.025 8.5E-07 53.4 8.6 97 132-240 1-117 (402)
457 3ps9_A TRNA 5-methylaminomethy 95.8 0.034 1.2E-06 55.7 9.9 110 130-240 66-219 (676)
458 3ldh_A Lactate dehydrogenase; 95.8 0.056 1.9E-06 50.1 10.5 105 130-240 20-138 (330)
459 3ufb_A Type I restriction-modi 95.8 0.06 2E-06 52.9 11.3 126 113-243 203-365 (530)
460 3qha_A Putative oxidoreductase 95.8 0.02 6.9E-07 51.5 7.4 90 131-240 15-105 (296)
461 1np3_A Ketol-acid reductoisome 95.8 0.022 7.6E-07 52.5 7.7 94 131-246 16-111 (338)
462 1obb_A Maltase, alpha-glucosid 95.8 0.05 1.7E-06 52.9 10.5 77 131-211 3-86 (480)
463 1rjd_A PPM1P, carboxy methyl t 95.7 0.095 3.3E-06 48.4 11.9 104 130-237 97-229 (334)
464 2q3e_A UDP-glucose 6-dehydroge 95.7 0.018 6.3E-07 55.4 7.3 102 132-240 6-131 (467)
465 1vpd_A Tartronate semialdehyde 95.7 0.018 6.2E-07 51.3 6.7 90 132-239 6-98 (299)
466 3hwr_A 2-dehydropantoate 2-red 95.7 0.027 9.4E-07 51.2 8.0 93 130-239 18-119 (318)
467 3oig_A Enoyl-[acyl-carrier-pro 95.5 0.11 3.7E-06 45.2 10.9 106 130-240 6-147 (266)
468 2iz1_A 6-phosphogluconate dehy 95.5 0.03 1E-06 54.0 7.8 95 132-238 6-101 (474)
469 2pv7_A T-protein [includes: ch 95.4 0.02 6.8E-07 51.7 5.9 76 132-239 22-98 (298)
470 1pgj_A 6PGDH, 6-PGDH, 6-phosph 95.4 0.028 9.4E-07 54.5 7.2 97 132-238 2-101 (478)
471 3pef_A 6-phosphogluconate dehy 95.3 0.021 7E-07 51.0 5.7 90 132-240 2-95 (287)
472 3pxx_A Carveol dehydrogenase; 95.3 0.2 6.8E-06 43.9 12.0 104 130-240 9-153 (287)
473 3hn2_A 2-dehydropantoate 2-red 95.3 0.013 4.5E-07 53.1 4.3 93 132-238 3-101 (312)
474 1x0v_A GPD-C, GPDH-C, glycerol 95.2 0.02 6.8E-07 52.4 5.4 98 131-239 8-123 (354)
475 2d4a_B Malate dehydrogenase; a 95.2 0.034 1.2E-06 50.8 6.9 102 133-240 1-116 (308)
476 1wma_A Carbonyl reductase [NAD 95.2 0.13 4.4E-06 44.3 10.4 106 130-240 3-138 (276)
477 1ur5_A Malate dehydrogenase; o 95.2 0.11 3.7E-06 47.3 10.2 100 132-240 3-119 (309)
478 3pdu_A 3-hydroxyisobutyrate de 95.2 0.022 7.5E-07 50.8 5.4 90 132-240 2-95 (287)
479 1jw9_B Molybdopterin biosynthe 95.2 0.041 1.4E-06 48.6 7.0 91 131-228 31-144 (249)
480 1guz_A Malate dehydrogenase; o 95.2 0.13 4.4E-06 46.7 10.6 101 132-240 1-118 (310)
481 1smk_A Malate dehydrogenase, g 95.1 0.089 3.1E-06 48.3 9.5 104 130-240 7-125 (326)
482 3h9u_A Adenosylhomocysteinase; 95.1 0.015 5E-07 56.0 4.2 111 109-243 187-300 (436)
483 1txg_A Glycerol-3-phosphate de 95.1 0.03 1E-06 50.5 6.2 93 132-239 1-103 (335)
484 3cky_A 2-hydroxymethyl glutara 95.1 0.039 1.3E-06 49.2 6.8 90 131-239 4-97 (301)
485 1u8x_X Maltose-6'-phosphate gl 95.1 0.057 2E-06 52.4 8.4 76 131-212 28-112 (472)
486 2pgd_A 6-phosphogluconate dehy 95.1 0.033 1.1E-06 53.9 6.7 96 132-238 3-99 (482)
487 2vz8_A Fatty acid synthase; tr 95.1 0.017 5.9E-07 66.3 5.2 102 126-239 1663-1769(2512)
488 3o38_A Short chain dehydrogena 95.1 0.18 6.1E-06 43.8 10.9 78 130-212 21-111 (266)
489 3dfz_A SIRC, precorrin-2 dehyd 95.0 0.04 1.4E-06 48.3 6.5 104 130-252 30-134 (223)
490 3qsg_A NAD-binding phosphogluc 95.0 0.051 1.8E-06 49.3 7.4 90 131-240 24-117 (312)
491 1evy_A Glycerol-3-phosphate de 95.0 0.031 1.1E-06 51.5 6.0 96 133-239 17-123 (366)
492 2izz_A Pyrroline-5-carboxylate 95.0 0.049 1.7E-06 49.6 7.2 88 131-238 22-116 (322)
493 2oo3_A Protein involved in cat 94.9 0.015 5E-07 52.9 3.5 93 135-238 98-196 (283)
494 1mld_A Malate dehydrogenase; o 94.9 0.16 5.4E-06 46.4 10.5 102 132-240 1-117 (314)
495 2raf_A Putative dinucleotide-b 94.9 0.039 1.3E-06 47.1 6.0 69 130-237 18-87 (209)
496 3i83_A 2-dehydropantoate 2-red 94.9 0.038 1.3E-06 50.2 6.2 99 132-244 3-108 (320)
497 2p4q_A 6-phosphogluconate dehy 94.9 0.034 1.2E-06 54.2 6.2 99 130-239 9-108 (497)
498 3qiv_A Short-chain dehydrogena 94.9 0.26 8.8E-06 42.4 11.3 75 130-211 8-95 (253)
499 3gvi_A Malate dehydrogenase; N 94.9 0.051 1.7E-06 50.1 7.0 101 131-240 7-124 (324)
500 3c7a_A Octopine dehydrogenase; 94.9 0.028 9.5E-07 52.6 5.3 95 132-238 3-114 (404)
No 1
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=100.00 E-value=1.6e-52 Score=387.45 Aligned_cols=253 Identities=21% Similarity=0.333 Sum_probs=231.7
Q ss_pred HHHHHHHHHHHHhccCCCCCChhhHHHHHHHHHHh---hc----CCcccccccCchhHHHHHHHHHHHHHHHhHhhhHHH
Q 042119 17 LLIASVMQIHASISKLESLKPSKQVNSIFSRLVKL---CT----IPSSIDITALPQEVQKMRESLIVLCGRAEGLLELEF 89 (286)
Q Consensus 17 ~~i~~i~~~~~~i~~l~~l~p~~~vn~lf~~Lv~~---c~----~~~~~~~~~~~~~~~~l~~~l~~l~~~~e~~lE~~~ 89 (286)
....+|.++|+.|+++++|+|++.||+||+.|++| |. .+...+.+..+++++++++.++++|+++++.+|.+|
T Consensus 5 ~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~~~vl~~~~~~~l~~~~~~~y~~~~~~~E~~w 84 (298)
T 3fpf_A 5 IYWDKIKRIASRLEGMNYHFDEMDTSGVMPLLDEIEEIAHDSTIDFESAKHILDDAEMNHALSLIRKFYVNLGMKLEMEK 84 (298)
T ss_dssp HHHHHHHHHHHHHGGGTTCGGGCCTTTTHHHHHHHHHHHTCTTSCHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCccccHHHHHHHHHHHHHhcccCCcCHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35789999999999999999999999999966665 44 222344445678999999999999999999999999
Q ss_pred HHHhcCCCCcccccccCcCccchhhhhHHHHHHHHhcCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHH
Q 042119 90 ATFLTKIPQPLNNLSLFPYYGNYVKLSKLEYTILSENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAAN 169 (286)
Q Consensus 90 A~~l~~~~~p~~~L~~fpy~~ny~~l~~~E~~~l~~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai 169 (286)
|++++++++||++|..||||+||+++++.|+.+ ..++++++||+|||||+|+|++.+|+ .+|++|+|||+|++++
T Consensus 85 a~~l~~~~~p~~~l~~fpy~~~~~~l~~~E~~l---a~l~~g~rVLDIGcG~G~~ta~~lA~--~~ga~V~gIDis~~~l 159 (298)
T 3fpf_A 85 AQEVIESDSPWETLRSFYFYPRYLELLKNEAAL---GRFRRGERAVFIGGGPLPLTGILLSH--VYGMRVNVVEIEPDIA 159 (298)
T ss_dssp HHHHHHCSSHHHHHHTSTTHHHHHHHHHHHHHH---TTCCTTCEEEEECCCSSCHHHHHHHH--TTCCEEEEEESSHHHH
T ss_pred HHHHhccCChHHhhccCCCcccHHHHHHHHHHH---cCCCCcCEEEEECCCccHHHHHHHHH--ccCCEEEEEECCHHHH
Confidence 999999999999999999999999999999874 36789999999999999999999998 5899999999999999
Q ss_pred HHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEeecCcceeeec
Q 042119 170 DVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRSAKGARAFLY 249 (286)
Q Consensus 170 ~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~~~g~r~~ly 249 (286)
+.||+++++.| + ++++|+++|+.+++ .+.||+||+++++ ++|.++++++.+.|||||+|++++.+|+|+++|
T Consensus 160 ~~Ar~~~~~~g-l-~~v~~v~gDa~~l~--d~~FDvV~~~a~~----~d~~~~l~el~r~LkPGG~Lvv~~~~~~r~~l~ 231 (298)
T 3fpf_A 160 ELSRKVIEGLG-V-DGVNVITGDETVID--GLEFDVLMVAALA----EPKRRVFRNIHRYVDTETRIIYRTYTGMRAILY 231 (298)
T ss_dssp HHHHHHHHHHT-C-CSEEEEESCGGGGG--GCCCSEEEECTTC----SCHHHHHHHHHHHCCTTCEEEEEECCGGGGGSS
T ss_pred HHHHHHHHhcC-C-CCeEEEECchhhCC--CCCcCEEEECCCc----cCHHHHHHHHHHHcCCCcEEEEEcCcchhhhcc
Confidence 99999999999 6 89999999998875 3689999988775 689999999999999999999999999999999
Q ss_pred ccCCcccccCcEEEEEecCcccceeeeEEEeec
Q 042119 250 PVVVEHDLLDFEVLSAVHPNDDVINSVVLVRNS 282 (286)
Q Consensus 250 p~v~~~~l~gf~~~~~~~P~~~vinsvi~~r~~ 282 (286)
|.+++.++.||+.+.+.||.++|+||||+|||.
T Consensus 232 ~~v~~~~~~gf~~~~~~~p~~~v~N~vv~a~k~ 264 (298)
T 3fpf_A 232 APVSDDDITGFRRAGVVLPSGKVNNTSVLVFKC 264 (298)
T ss_dssp CCCCTGGGTTEEEEEEECCCTTCCCEEEEEEEC
T ss_pred ccCChhhhhhhhheeEECCCCCcCcEEEEEEcc
Confidence 999999889999999999999999999999994
No 2
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.74 E-value=1.3e-17 Score=150.81 Aligned_cols=126 Identities=14% Similarity=0.192 Sum_probs=99.8
Q ss_pred cCccchhhhhHHHHHHHHhcCCCCCCEEEEeccCCChhhHHHHHhhc-CCCcEEEEEeCChHHHHHHHHHHHhcCCCCCC
Q 042119 107 PYYGNYVKLSKLEYTILSENGVVQPKKVAFVGSGPMPLTSIIMAKHH-LTSTHFDNFDIDEAANDVARSIVASDAEFEGR 185 (286)
Q Consensus 107 py~~ny~~l~~~E~~~l~~~~~~~~~~VL~IG~G~lp~tai~lA~~~-~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~ 185 (286)
|+|++...++.. ++.+ .++++.+|||||||+ |..++.+|++. .+|++|+|||+|++|++.||+.++..| ...+
T Consensus 51 P~Y~~~~~~i~~---l~~~-~~~~~~~vLDlGcGt-G~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~-~~~~ 124 (261)
T 4gek_A 51 PGYSNIISMIGM---LAER-FVQPGTQVYDLGCSL-GAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYK-APTP 124 (261)
T ss_dssp TTHHHHHHHHHH---HHHH-HCCTTCEEEEETCTT-THHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSC-CSSC
T ss_pred CCHHHHHHHHHH---HHHH-hCCCCCEEEEEeCCC-CHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhc-cCce
Confidence 676665554432 2222 357889999999996 66677788742 368999999999999999999999988 6789
Q ss_pred eEEEEccccchhhcCCCcceeehhhhc-cCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 186 MKFLTRDIMEVKEQLGEYDCIFLAALV-GMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 186 i~f~~~D~~~~~~~l~~fD~V~~aalv-g~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
|+|+++|+.+++. ++||+|+..... ..+.+++..+|+++++.|||||++++.+
T Consensus 125 v~~~~~D~~~~~~--~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e 178 (261)
T 4gek_A 125 VDVIEGDIRDIAI--ENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSE 178 (261)
T ss_dssp EEEEESCTTTCCC--CSEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEeecccccccc--cccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEe
Confidence 9999999987653 579998765433 4466788899999999999999999864
No 3
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.67 E-value=7.9e-16 Score=130.19 Aligned_cols=107 Identities=18% Similarity=0.273 Sum_probs=88.9
Q ss_pred CCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCccee
Q 042119 127 GVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCI 206 (286)
Q Consensus 127 ~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V 206 (286)
...++.+||+||||+ |..+..+++ .|.+|+++|+|+.+++.|++.+...+ + .+++++++|+.+.+. .+.||+|
T Consensus 29 ~~~~~~~vLdiG~G~-G~~~~~l~~---~~~~v~~vD~s~~~~~~a~~~~~~~~-~-~~~~~~~~d~~~~~~-~~~~D~v 101 (199)
T 2xvm_A 29 KVVKPGKTLDLGCGN-GRNSLYLAA---NGYDVDAWDKNAMSIANVERIKSIEN-L-DNLHTRVVDLNNLTF-DRQYDFI 101 (199)
T ss_dssp TTSCSCEEEEETCTT-SHHHHHHHH---TTCEEEEEESCHHHHHHHHHHHHHHT-C-TTEEEEECCGGGCCC-CCCEEEE
T ss_pred hccCCCeEEEEcCCC-CHHHHHHHH---CCCeEEEEECCHHHHHHHHHHHHhCC-C-CCcEEEEcchhhCCC-CCCceEE
Confidence 345778999999996 666788888 38899999999999999999999888 3 579999999988665 4679999
Q ss_pred ehhhhc-cCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 207 FLAALV-GMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 207 ~~aalv-g~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
+..... .++.++..++++++.+.|+|||.+++.+
T Consensus 102 ~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 136 (199)
T 2xvm_A 102 LSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVA 136 (199)
T ss_dssp EEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 866443 4455678899999999999999987754
No 4
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.65 E-value=1.1e-16 Score=142.70 Aligned_cols=107 Identities=18% Similarity=0.201 Sum_probs=92.5
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcC------CC
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQL------GE 202 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l------~~ 202 (286)
.++++||+||||+ |.+++++|+...++++|+++|+|+++++.|++.++..| +.++|+|+++|+.+....+ +.
T Consensus 59 ~~~~~VLDiG~G~-G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g-~~~~i~~~~gda~~~l~~~~~~~~~~~ 136 (242)
T 3r3h_A 59 TRAKKVLELGTFT-GYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAK-QEHKIKLRLGPALDTLHSLLNEGGEHQ 136 (242)
T ss_dssp HTCSEEEEEESCC-SHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTT-CTTTEEEEESCHHHHHHHHHHHHCSSC
T ss_pred cCcCEEEEeeCCc-CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC-CCCcEEEEEcCHHHHHHHHhhccCCCC
Confidence 4678999999995 88889999843348999999999999999999999999 7889999999998765543 68
Q ss_pred cceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEeec
Q 042119 203 YDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRSA 241 (286)
Q Consensus 203 fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~~ 241 (286)
||+||+++.. +....+++.+.+.|+|||++++.+.
T Consensus 137 fD~V~~d~~~----~~~~~~l~~~~~~LkpGG~lv~d~~ 171 (242)
T 3r3h_A 137 FDFIFIDADK----TNYLNYYELALKLVTPKGLIAIDNI 171 (242)
T ss_dssp EEEEEEESCG----GGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred EeEEEEcCCh----HHhHHHHHHHHHhcCCCeEEEEECC
Confidence 9999987643 6777899999999999999999763
No 5
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.65 E-value=4.1e-16 Score=137.38 Aligned_cols=106 Identities=14% Similarity=0.271 Sum_probs=91.6
Q ss_pred CCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCC-CCeEEEEccccchhhcC--CCccee
Q 042119 130 QPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFE-GRMKFLTRDIMEVKEQL--GEYDCI 206 (286)
Q Consensus 130 ~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~-~~i~f~~~D~~~~~~~l--~~fD~V 206 (286)
++.+||+|||| .|.+++++|++..++++|+++|+|+++++.|++.++..| +. ++++|+++|+.+....+ +.||+|
T Consensus 56 ~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g-~~~~~i~~~~gda~~~l~~~~~~~fD~V 133 (221)
T 3dr5_A 56 GSTGAIAITPA-AGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAG-YSPSRVRFLLSRPLDVMSRLANDSYQLV 133 (221)
T ss_dssp TCCEEEEESTT-HHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTT-CCGGGEEEECSCHHHHGGGSCTTCEEEE
T ss_pred CCCCEEEEcCC-chHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC-CCcCcEEEEEcCHHHHHHHhcCCCcCeE
Confidence 34599999999 489999999853458999999999999999999999999 67 79999999998876554 579999
Q ss_pred ehhhhccCChhHHHHHHHHHHhhccCCcEEEEeec
Q 042119 207 FLAALVGMSKEEKLTILGHIRKYMKDGGILLVRSA 241 (286)
Q Consensus 207 ~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~~ 241 (286)
|+++.. ....++++.+.+.|+|||++++.+.
T Consensus 134 ~~d~~~----~~~~~~l~~~~~~LkpGG~lv~dn~ 164 (221)
T 3dr5_A 134 FGQVSP----MDLKALVDAAWPLLRRGGALVLADA 164 (221)
T ss_dssp EECCCT----TTHHHHHHHHHHHEEEEEEEEETTT
T ss_pred EEcCcH----HHHHHHHHHHHHHcCCCcEEEEeCC
Confidence 987643 5667899999999999999999763
No 6
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.64 E-value=9e-16 Score=140.28 Aligned_cols=111 Identities=18% Similarity=0.180 Sum_probs=92.3
Q ss_pred CCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCccee
Q 042119 127 GVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCI 206 (286)
Q Consensus 127 ~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V 206 (286)
.+.++.+|||||||+ |..++.+|.+..++++|+|+|+|+.+++.|++.+...| +.++++|+++|+.+++.+ +.||+|
T Consensus 115 ~l~~~~~vLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~~~~-~~fD~v 191 (305)
T 3ocj_A 115 HLRPGCVVASVPCGW-MSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHA-LAGQITLHRQDAWKLDTR-EGYDLL 191 (305)
T ss_dssp HCCTTCEEEETTCTT-CHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTST-TGGGEEEEECCGGGCCCC-SCEEEE
T ss_pred hCCCCCEEEEecCCC-CHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcC-CCCceEEEECchhcCCcc-CCeEEE
Confidence 357889999999996 66677775324689999999999999999999999999 678899999999987766 789999
Q ss_pred ehhhhc-cC-ChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 207 FLAALV-GM-SKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 207 ~~aalv-g~-~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
+..... .. +.+...++++++.+.|+|||++++.+
T Consensus 192 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 227 (305)
T 3ocj_A 192 TSNGLNIYEPDDARVTELYRRFWQALKPGGALVTSF 227 (305)
T ss_dssp ECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred EECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 975533 33 34444568999999999999999976
No 7
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.63 E-value=4.6e-16 Score=134.64 Aligned_cols=108 Identities=13% Similarity=0.160 Sum_probs=85.3
Q ss_pred CCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcC------C----CCCCeEEEEccccch
Q 042119 127 GVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDA------E----FEGRMKFLTRDIMEV 196 (286)
Q Consensus 127 ~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g------~----l~~~i~f~~~D~~~~ 196 (286)
.+.++.+|||+|||+ |..+..||+ .|.+|+|+|+|++|++.|++..+..+ . ...+++|+++|+.++
T Consensus 19 ~~~~~~~vLD~GCG~-G~~~~~la~---~g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l 94 (203)
T 1pjz_A 19 NVVPGARVLVPLCGK-SQDMSWLSG---QGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFAL 94 (203)
T ss_dssp CCCTTCEEEETTTCC-SHHHHHHHH---HCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSS
T ss_pred ccCCCCEEEEeCCCC-cHhHHHHHH---CCCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccC
Confidence 456789999999996 677888998 48899999999999999998754310 0 025899999999887
Q ss_pred hhcC-CCcceeehh-hhccCChhHHHHHHHHHHhhccCCcEEEE
Q 042119 197 KEQL-GEYDCIFLA-ALVGMSKEEKLTILGHIRKYMKDGGILLV 238 (286)
Q Consensus 197 ~~~l-~~fD~V~~a-alvg~~~~~k~~vl~~l~~~l~pgg~lv~ 238 (286)
+... +.||+|+.. ++..++.+++.++++++++.|||||++++
T Consensus 95 ~~~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l 138 (203)
T 1pjz_A 95 TARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLL 138 (203)
T ss_dssp THHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEE
T ss_pred CcccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEE
Confidence 7653 689999853 23345667788899999999999998333
No 8
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.63 E-value=1.7e-15 Score=131.54 Aligned_cols=106 Identities=17% Similarity=0.276 Sum_probs=90.3
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCC-CcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcC-----CC
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLT-STHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQL-----GE 202 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~-g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l-----~~ 202 (286)
.++.+||+||||+ |..++.+|++ ++ +++|+++|+|+++++.|++.++..| +.++++++++|+.+....+ +.
T Consensus 57 ~~~~~vLdiG~G~-G~~~~~la~~-~~~~~~v~~vD~~~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~~~~~~~~~~~~ 133 (223)
T 3duw_A 57 QGARNILEIGTLG-GYSTIWLARG-LSSGGRVVTLEASEKHADIARSNIERAN-LNDRVEVRTGLALDSLQQIENEKYEP 133 (223)
T ss_dssp HTCSEEEEECCTT-SHHHHHHHTT-CCSSCEEEEEESCHHHHHHHHHHHHHTT-CTTTEEEEESCHHHHHHHHHHTTCCC
T ss_pred hCCCEEEEecCCc-cHHHHHHHHh-CCCCCEEEEEECCHHHHHHHHHHHHHcC-CCCcEEEEEcCHHHHHHHHHhcCCCC
Confidence 4689999999996 7788889983 55 8999999999999999999999999 7788999999997754332 46
Q ss_pred cceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEeec
Q 042119 203 YDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRSA 241 (286)
Q Consensus 203 fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~~ 241 (286)
||+||+++.. +....+++++.+.|+|||++++.+.
T Consensus 134 fD~v~~d~~~----~~~~~~l~~~~~~L~pgG~lv~~~~ 168 (223)
T 3duw_A 134 FDFIFIDADK----QNNPAYFEWALKLSRPGTVIIGDNV 168 (223)
T ss_dssp CSEEEECSCG----GGHHHHHHHHHHTCCTTCEEEEESC
T ss_pred cCEEEEcCCc----HHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 9999987543 5667899999999999999999763
No 9
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.63 E-value=4.1e-15 Score=128.24 Aligned_cols=152 Identities=18% Similarity=0.095 Sum_probs=109.3
Q ss_pred hcCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcc
Q 042119 125 ENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYD 204 (286)
Q Consensus 125 ~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD 204 (286)
.....++.+|||||||+ |..+..+++...++.+|+++|+|+++++.|++.+...| + .+++|+++|+.+.+...+.||
T Consensus 32 ~~~~~~~~~vLDiG~G~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~-~~~~~~~~d~~~~~~~~~~fD 108 (219)
T 3dh0_A 32 EFGLKEGMTVLDVGTGA-GFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLG-L-KNVEVLKSEENKIPLPDNTVD 108 (219)
T ss_dssp HHTCCTTCEEEESSCTT-CTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHT-C-TTEEEEECBTTBCSSCSSCEE
T ss_pred HhCCCCCCEEEEEecCC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcC-C-CcEEEEecccccCCCCCCCee
Confidence 44567889999999997 55667777743367899999999999999999999988 4 489999999988765556799
Q ss_pred eeehhhhccCChhHHHHHHHHHHhhccCCcEEEEeecCccee----eecccCCcccc------cCcEEEEEecCccccee
Q 042119 205 CIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRSAKGARA----FLYPVVVEHDL------LDFEVLSAVHPNDDVIN 274 (286)
Q Consensus 205 ~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~~~g~r~----~lyp~v~~~~l------~gf~~~~~~~P~~~vin 274 (286)
+|+....+.. .++...+++++.+.|+|||.+++.+...... ........+++ .||+++....-.+ ..
T Consensus 109 ~v~~~~~l~~-~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~--~~ 185 (219)
T 3dh0_A 109 FIFMAFTFHE-LSEPLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGRVVEVGK--YC 185 (219)
T ss_dssp EEEEESCGGG-CSSHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEEEEETT--TE
T ss_pred EEEeehhhhh-cCCHHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEEEEEeeCC--ce
Confidence 9997654422 2466789999999999999999976321111 11111122221 5999876654332 34
Q ss_pred eeEEEeec
Q 042119 275 SVVLVRNS 282 (286)
Q Consensus 275 svi~~r~~ 282 (286)
-.+++||+
T Consensus 186 ~~~~~~k~ 193 (219)
T 3dh0_A 186 FGVYAMIV 193 (219)
T ss_dssp EEEEEECC
T ss_pred EEEEEEec
Confidence 46777775
No 10
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.62 E-value=1.8e-15 Score=133.69 Aligned_cols=145 Identities=14% Similarity=0.129 Sum_probs=105.0
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhc---CCCcce
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQ---LGEYDC 205 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~---l~~fD~ 205 (286)
.++.+|||||||+ |..++.+|+ ..++++|+++|+|+++++.|++.++..| +. +++|+++|+.+++.. .+.||+
T Consensus 69 ~~~~~vLDiG~G~-G~~~~~la~-~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~-~v~~~~~d~~~~~~~~~~~~~fD~ 144 (240)
T 1xdz_A 69 NQVNTICDVGAGA-GFPSLPIKI-CFPHLHVTIVDSLNKRITFLEKLSEALQ-LE-NTTFCHDRAETFGQRKDVRESYDI 144 (240)
T ss_dssp GGCCEEEEECSSS-CTTHHHHHH-HCTTCEEEEEESCHHHHHHHHHHHHHHT-CS-SEEEEESCHHHHTTCTTTTTCEEE
T ss_pred CCCCEEEEecCCC-CHHHHHHHH-hCCCCEEEEEeCCHHHHHHHHHHHHHcC-CC-CEEEEeccHHHhcccccccCCccE
Confidence 4678999999996 777888886 3588999999999999999999999999 44 699999999887643 357999
Q ss_pred eehhhhccCChhHHHHHHHHHHhhccCCcEEEEeecCcceeeecccCCcccccCcEEEE---EecCcccceeeeEEEeec
Q 042119 206 IFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRSAKGARAFLYPVVVEHDLLDFEVLS---AVHPNDDVINSVVLVRNS 282 (286)
Q Consensus 206 V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~~~g~r~~lyp~v~~~~l~gf~~~~---~~~P~~~vinsvi~~r~~ 282 (286)
|+..+. .+...+++.+.+.|+|||.+++-.+.....-+-.....-.-.||++.. ..+|..+....+++++|+
T Consensus 145 V~~~~~-----~~~~~~l~~~~~~LkpgG~l~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~k~ 219 (240)
T 1xdz_A 145 VTARAV-----ARLSVLSELCLPLVKKNGLFVALKAASAEEELNAGKKAITTLGGELENIHSFKLPIEESDRNIMVIRKI 219 (240)
T ss_dssp EEEECC-----SCHHHHHHHHGGGEEEEEEEEEEECC-CHHHHHHHHHHHHHTTEEEEEEEEEECTTTCCEEEEEEEEEC
T ss_pred EEEecc-----CCHHHHHHHHHHhcCCCCEEEEEeCCCchHHHHHHHHHHHHcCCeEeEEEEEecCCCCCceEEEEEEec
Confidence 997653 466789999999999999998864221100000000000114776653 446776666667777774
No 11
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.62 E-value=6.2e-15 Score=124.24 Aligned_cols=109 Identities=12% Similarity=0.085 Sum_probs=87.3
Q ss_pred CCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhc-CCCcce
Q 042119 127 GVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQ-LGEYDC 205 (286)
Q Consensus 127 ~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~-l~~fD~ 205 (286)
.+.++.+|||||||+ |..++.+|+ .+.+|+|+|+|+++++.|++.++..| + ++++|+++|..++... .+.||+
T Consensus 19 ~~~~~~~vLDiGcG~-G~~~~~la~---~~~~v~~vD~s~~~l~~a~~~~~~~~-~-~~v~~~~~~~~~l~~~~~~~fD~ 92 (185)
T 3mti_A 19 VLDDESIVVDATMGN-GNDTAFLAG---LSKKVYAFDVQEQALGKTSQRLSDLG-I-ENTELILDGHENLDHYVREPIRA 92 (185)
T ss_dssp TCCTTCEEEESCCTT-SHHHHHHHT---TSSEEEEEESCHHHHHHHHHHHHHHT-C-CCEEEEESCGGGGGGTCCSCEEE
T ss_pred hCCCCCEEEEEcCCC-CHHHHHHHH---hCCEEEEEECCHHHHHHHHHHHHHcC-C-CcEEEEeCcHHHHHhhccCCcCE
Confidence 457889999999997 677788988 38999999999999999999999999 5 7899999888775432 246999
Q ss_pred eehhh-hccC-------ChhHHHHHHHHHHhhccCCcEEEEeec
Q 042119 206 IFLAA-LVGM-------SKEEKLTILGHIRKYMKDGGILLVRSA 241 (286)
Q Consensus 206 V~~aa-lvg~-------~~~~k~~vl~~l~~~l~pgg~lv~r~~ 241 (286)
|++.. .+.. ..+...++++++.+.|||||.+++...
T Consensus 93 v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 136 (185)
T 3mti_A 93 AIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIY 136 (185)
T ss_dssp EEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEe
Confidence 98652 2211 335667889999999999999988754
No 12
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.62 E-value=5.2e-15 Score=126.97 Aligned_cols=111 Identities=13% Similarity=0.131 Sum_probs=93.3
Q ss_pred HHHhcCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCC
Q 042119 122 ILSENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLG 201 (286)
Q Consensus 122 ~l~~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~ 201 (286)
.+....+.++.+|||||||+ |..++.+|+ ..++.+|+++|+|+++++.|++.++..| + ++++++++|+.+......
T Consensus 32 ~l~~l~~~~~~~vLDiG~G~-G~~~~~la~-~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~-~~v~~~~~d~~~~~~~~~ 107 (204)
T 3e05_A 32 TLSKLRLQDDLVMWDIGAGS-ASVSIEASN-LMPNGRIFALERNPQYLGFIRDNLKKFV-A-RNVTLVEAFAPEGLDDLP 107 (204)
T ss_dssp HHHHTTCCTTCEEEEETCTT-CHHHHHHHH-HCTTSEEEEEECCHHHHHHHHHHHHHHT-C-TTEEEEECCTTTTCTTSC
T ss_pred HHHHcCCCCCCEEEEECCCC-CHHHHHHHH-HCCCCEEEEEeCCHHHHHHHHHHHHHhC-C-CcEEEEeCChhhhhhcCC
Confidence 34455678889999999997 667788887 3677999999999999999999999999 4 789999999977665557
Q ss_pred CcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 202 EYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 202 ~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
.||+|+..... .+..++++++.+.|+|||++++..
T Consensus 108 ~~D~i~~~~~~----~~~~~~l~~~~~~LkpgG~l~~~~ 142 (204)
T 3e05_A 108 DPDRVFIGGSG----GMLEEIIDAVDRRLKSEGVIVLNA 142 (204)
T ss_dssp CCSEEEESCCT----TCHHHHHHHHHHHCCTTCEEEEEE
T ss_pred CCCEEEECCCC----cCHHHHHHHHHHhcCCCeEEEEEe
Confidence 89999976543 366689999999999999999974
No 13
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.61 E-value=4.7e-15 Score=132.19 Aligned_cols=106 Identities=21% Similarity=0.315 Sum_probs=90.9
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCC-CcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcC---CCcc
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLT-STHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQL---GEYD 204 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~-g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l---~~fD 204 (286)
.++++||+||||+ |.+++.+|+. ++ +++|+++|+|+++++.|++.++..| +.++++|+++|+.+....+ +.||
T Consensus 62 ~~~~~VLdiG~G~-G~~~~~la~~-~~~~~~v~~vD~s~~~~~~a~~~~~~~g-~~~~v~~~~~d~~~~l~~~~~~~~fD 138 (248)
T 3tfw_A 62 TQAKRILEIGTLG-GYSTIWMARE-LPADGQLLTLEADAHHAQVARENLQLAG-VDQRVTLREGPALQSLESLGECPAFD 138 (248)
T ss_dssp HTCSEEEEECCTT-SHHHHHHHTT-SCTTCEEEEEECCHHHHHHHHHHHHHTT-CTTTEEEEESCHHHHHHTCCSCCCCS
T ss_pred cCCCEEEEecCCc-hHHHHHHHHh-CCCCCEEEEEECCHHHHHHHHHHHHHcC-CCCcEEEEEcCHHHHHHhcCCCCCeE
Confidence 4689999999996 7788899983 55 8999999999999999999999999 7789999999998754433 3799
Q ss_pred eeehhhhccCChhHHHHHHHHHHhhccCCcEEEEeec
Q 042119 205 CIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRSA 241 (286)
Q Consensus 205 ~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~~ 241 (286)
+||+++. .+....+++++.+.|+|||++++.+.
T Consensus 139 ~V~~d~~----~~~~~~~l~~~~~~LkpGG~lv~~~~ 171 (248)
T 3tfw_A 139 LIFIDAD----KPNNPHYLRWALRYSRPGTLIIGDNV 171 (248)
T ss_dssp EEEECSC----GGGHHHHHHHHHHTCCTTCEEEEECC
T ss_pred EEEECCc----hHHHHHHHHHHHHhcCCCeEEEEeCC
Confidence 9998754 36777899999999999999999763
No 14
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.61 E-value=7.1e-15 Score=125.85 Aligned_cols=138 Identities=15% Similarity=0.165 Sum_probs=103.5
Q ss_pred CCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeehh
Q 042119 130 QPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFLA 209 (286)
Q Consensus 130 ~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~a 209 (286)
++.+|||||||+ |..++.+++ ..++.+|+++|+|+++++.|++.+...| +. +++|+++|+.+.+ ..+.||+|+..
T Consensus 65 ~~~~vLDiG~G~-G~~~~~l~~-~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~-~v~~~~~d~~~~~-~~~~~D~i~~~ 139 (207)
T 1jsx_A 65 QGERFIDVGTGP-GLPGIPLSI-VRPEAHFTLLDSLGKRVRFLRQVQHELK-LE-NIEPVQSRVEEFP-SEPPFDGVISR 139 (207)
T ss_dssp CSSEEEEETCTT-TTTHHHHHH-HCTTSEEEEEESCHHHHHHHHHHHHHTT-CS-SEEEEECCTTTSC-CCSCEEEEECS
T ss_pred CCCeEEEECCCC-CHHHHHHHH-HCCCCEEEEEeCCHHHHHHHHHHHHHcC-CC-CeEEEecchhhCC-ccCCcCEEEEe
Confidence 478999999996 566677777 4688999999999999999999999998 44 4999999998755 23579999965
Q ss_pred hhccCChhHHHHHHHHHHhhccCCcEEEEeecCcceeeecccCCcccccCcEEEE---EecCcccceeeeEEEeec
Q 042119 210 ALVGMSKEEKLTILGHIRKYMKDGGILLVRSAKGARAFLYPVVVEHDLLDFEVLS---AVHPNDDVINSVVLVRNS 282 (286)
Q Consensus 210 alvg~~~~~k~~vl~~l~~~l~pgg~lv~r~~~g~r~~lyp~v~~~~l~gf~~~~---~~~P~~~vinsvi~~r~~ 282 (286)
.+ ++...+++.+.+.|+|||.+++..+.....- +. .-..||+... ...|...-..++++.+|+
T Consensus 140 ~~-----~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~----~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~k~ 205 (207)
T 1jsx_A 140 AF-----ASLNDMVSWCHHLPGEQGRFYALKGQMPEDE----IA-LLPEEYQVESVVKLQVPALDGERHLVVIKAN 205 (207)
T ss_dssp CS-----SSHHHHHHHHTTSEEEEEEEEEEESSCCHHH----HH-TSCTTEEEEEEEEEECC--CCEEEEEEEEEC
T ss_pred cc-----CCHHHHHHHHHHhcCCCcEEEEEeCCCchHH----HH-HHhcCCceeeeeeeccCCCCCceEEEEEEec
Confidence 43 4567899999999999999998753211000 00 0113888764 367877778888888885
No 15
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.61 E-value=2.6e-15 Score=132.33 Aligned_cols=105 Identities=18% Similarity=0.274 Sum_probs=91.1
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhh-c-CCCccee
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKE-Q-LGEYDCI 206 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~-~-l~~fD~V 206 (286)
.++++|||||||+ |.+++.+|+ ..++.+|+++|+|+++++.|++.++..| +.++++|+++|+.+... . .+.||+|
T Consensus 70 ~~~~~vLDiG~G~-G~~~~~la~-~~~~~~v~~vD~~~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~~~~~~~~~fD~V 146 (232)
T 3ntv_A 70 NNVKNILEIGTAI-GYSSMQFAS-ISDDIHVTTIERNETMIQYAKQNLATYH-FENQVRIIEGNALEQFENVNDKVYDMI 146 (232)
T ss_dssp HTCCEEEEECCSS-SHHHHHHHT-TCTTCEEEEEECCHHHHHHHHHHHHHTT-CTTTEEEEESCGGGCHHHHTTSCEEEE
T ss_pred cCCCEEEEEeCch-hHHHHHHHH-hCCCCEEEEEECCHHHHHHHHHHHHHcC-CCCcEEEEECCHHHHHHhhccCCccEE
Confidence 4688999999995 788899998 5789999999999999999999999999 67799999999987654 3 3579999
Q ss_pred ehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 207 FLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 207 ~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
|+.+.. +....+++.+.+.|+|||++++.+
T Consensus 147 ~~~~~~----~~~~~~l~~~~~~LkpgG~lv~d~ 176 (232)
T 3ntv_A 147 FIDAAK----AQSKKFFEIYTPLLKHQGLVITDN 176 (232)
T ss_dssp EEETTS----SSHHHHHHHHGGGEEEEEEEEEEC
T ss_pred EEcCcH----HHHHHHHHHHHHhcCCCeEEEEee
Confidence 977543 566789999999999999999965
No 16
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.61 E-value=1.1e-14 Score=126.36 Aligned_cols=109 Identities=8% Similarity=0.096 Sum_probs=91.4
Q ss_pred HHHhcCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCC
Q 042119 122 ILSENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLG 201 (286)
Q Consensus 122 ~l~~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~ 201 (286)
.+....+.++.+|||||||+ |..++.+|+ .+.+|+++|+|+++++.|++.++..| +.++++++++|+.+......
T Consensus 47 ~l~~l~~~~~~~vLDlGcG~-G~~~~~la~---~~~~v~~vD~s~~~~~~a~~~~~~~g-~~~~v~~~~~d~~~~~~~~~ 121 (204)
T 3njr_A 47 TLAALAPRRGELLWDIGGGS-GSVSVEWCL---AGGRAITIEPRADRIENIQKNIDTYG-LSPRMRAVQGTAPAALADLP 121 (204)
T ss_dssp HHHHHCCCTTCEEEEETCTT-CHHHHHHHH---TTCEEEEEESCHHHHHHHHHHHHHTT-CTTTEEEEESCTTGGGTTSC
T ss_pred HHHhcCCCCCCEEEEecCCC-CHHHHHHHH---cCCEEEEEeCCHHHHHHHHHHHHHcC-CCCCEEEEeCchhhhcccCC
Confidence 34455678889999999997 777788888 38999999999999999999999999 56689999999988555556
Q ss_pred CcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEeec
Q 042119 202 EYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRSA 241 (286)
Q Consensus 202 ~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~~ 241 (286)
.||+||..... +.. +++++.+.|+|||++++...
T Consensus 122 ~~D~v~~~~~~-----~~~-~l~~~~~~LkpgG~lv~~~~ 155 (204)
T 3njr_A 122 LPEAVFIGGGG-----SQA-LYDRLWEWLAPGTRIVANAV 155 (204)
T ss_dssp CCSEEEECSCC-----CHH-HHHHHHHHSCTTCEEEEEEC
T ss_pred CCCEEEECCcc-----cHH-HHHHHHHhcCCCcEEEEEec
Confidence 89999976522 344 99999999999999999763
No 17
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.60 E-value=2.5e-15 Score=134.34 Aligned_cols=105 Identities=16% Similarity=0.290 Sum_probs=91.1
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCC-CcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhc-------C
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLT-STHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQ-------L 200 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~-g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~-------l 200 (286)
.++++||+||||+ |.+++++|+. ++ +++|+++|+|+++++.|++.++..| +.++++|+++|+.+.... .
T Consensus 78 ~~~~~VLeiG~G~-G~~~~~la~~-~~~~~~v~~iD~s~~~~~~a~~~~~~~g-~~~~i~~~~gda~~~l~~l~~~~~~~ 154 (247)
T 1sui_A 78 INAKNTMEIGVYT-GYSLLATALA-IPEDGKILAMDINKENYELGLPVIKKAG-VDHKIDFREGPALPVLDEMIKDEKNH 154 (247)
T ss_dssp TTCCEEEEECCGG-GHHHHHHHHH-SCTTCEEEEEESCCHHHHHHHHHHHHTT-CGGGEEEEESCHHHHHHHHHHSGGGT
T ss_pred hCcCEEEEeCCCc-CHHHHHHHHh-CCCCCEEEEEECCHHHHHHHHHHHHHcC-CCCCeEEEECCHHHHHHHHHhccCCC
Confidence 4678999999995 8899999984 44 8999999999999999999999999 778999999999875432 3
Q ss_pred CCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 201 GEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 201 ~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
+.||+||+++.. .....+++.+.+.|+|||++++.+
T Consensus 155 ~~fD~V~~d~~~----~~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 155 GSYDFIFVDADK----DNYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp TCBSEEEECSCS----TTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred CCEEEEEEcCch----HHHHHHHHHHHHhCCCCeEEEEec
Confidence 579999987643 567789999999999999999976
No 18
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.60 E-value=2.2e-14 Score=121.72 Aligned_cols=125 Identities=10% Similarity=0.102 Sum_probs=95.0
Q ss_pred hhhhHHHHHHHHhcCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEcc
Q 042119 113 VKLSKLEYTILSENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRD 192 (286)
Q Consensus 113 ~~l~~~E~~~l~~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D 192 (286)
..+.+.=+..+......++.+|||+|||++ ..++.+++ ....+|+++|+|+++++.|++.++..| + ++++|+++|
T Consensus 27 ~~~~~~l~~~l~~~~~~~~~~vLDlgcG~G-~~~~~~~~--~~~~~v~~vD~~~~~~~~a~~~~~~~~-~-~~v~~~~~d 101 (189)
T 3p9n_A 27 DRVRESLFNIVTARRDLTGLAVLDLYAGSG-ALGLEALS--RGAASVLFVESDQRSAAVIARNIEALG-L-SGATLRRGA 101 (189)
T ss_dssp HHHHHHHHHHHHHHSCCTTCEEEEETCTTC-HHHHHHHH--TTCSEEEEEECCHHHHHHHHHHHHHHT-C-SCEEEEESC
T ss_pred HHHHHHHHHHHHhccCCCCCEEEEeCCCcC-HHHHHHHH--CCCCeEEEEECCHHHHHHHHHHHHHcC-C-CceEEEEcc
Confidence 333333334443333357899999999975 45555565 255689999999999999999999999 5 789999999
Q ss_pred ccchhhc--CCCcceeehhhhccCChhHHHHHHHHHHh--hccCCcEEEEeecC
Q 042119 193 IMEVKEQ--LGEYDCIFLAALVGMSKEEKLTILGHIRK--YMKDGGILLVRSAK 242 (286)
Q Consensus 193 ~~~~~~~--l~~fD~V~~aalvg~~~~~k~~vl~~l~~--~l~pgg~lv~r~~~ 242 (286)
+.+.... .+.||+|+.+...+...++..++++.+.+ .|+|||++++....
T Consensus 102 ~~~~~~~~~~~~fD~i~~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~ 155 (189)
T 3p9n_A 102 VAAVVAAGTTSPVDLVLADPPYNVDSADVDAILAALGTNGWTREGTVAVVERAT 155 (189)
T ss_dssp HHHHHHHCCSSCCSEEEECCCTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEET
T ss_pred HHHHHhhccCCCccEEEECCCCCcchhhHHHHHHHHHhcCccCCCeEEEEEecC
Confidence 9887643 35799999764434334677889999999 99999999997654
No 19
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.60 E-value=3.9e-15 Score=133.87 Aligned_cols=107 Identities=16% Similarity=0.133 Sum_probs=85.6
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHh---------cC------CCCCCeEEEEccc
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVAS---------DA------EFEGRMKFLTRDI 193 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~---------~g------~l~~~i~f~~~D~ 193 (286)
.++.+||++|||+ |..+.+||+ .|.+|+|||+|+.|++.|++.... .+ ....+++|+++|+
T Consensus 67 ~~~~~vLD~GCG~-G~~~~~La~---~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~ 142 (252)
T 2gb4_A 67 QSGLRVFFPLCGK-AIEMKWFAD---RGHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSI 142 (252)
T ss_dssp CCSCEEEETTCTT-CTHHHHHHH---TTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCT
T ss_pred CCCCeEEEeCCCC-cHHHHHHHH---CCCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcc
Confidence 5778999999996 777889998 689999999999999999876431 00 0125899999999
Q ss_pred cchhhcC-CCcceeehhh-hccCChhHHHHHHHHHHhhccCCcEEEEe
Q 042119 194 MEVKEQL-GEYDCIFLAA-LVGMSKEEKLTILGHIRKYMKDGGILLVR 239 (286)
Q Consensus 194 ~~~~~~l-~~fD~V~~aa-lvg~~~~~k~~vl~~l~~~l~pgg~lv~r 239 (286)
.+++... +.||+|+... +..++.+++..+++++.+.|||||++++.
T Consensus 143 ~~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~ 190 (252)
T 2gb4_A 143 FDLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVA 190 (252)
T ss_dssp TTGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred ccCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 9987653 6899998543 33456677889999999999999998643
No 20
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.60 E-value=3.5e-15 Score=129.58 Aligned_cols=106 Identities=21% Similarity=0.307 Sum_probs=90.3
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCC-CcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcC------C
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLT-STHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQL------G 201 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~-g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l------~ 201 (286)
.++.+||+||||+ |..++.+|++ ++ +++|+++|+|+++++.|++.++..| +.++++|+++|+.+....+ +
T Consensus 63 ~~~~~vLdiG~G~-G~~~~~la~~-~~~~~~v~~vD~~~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~~~~~~~~~~~~ 139 (225)
T 3tr6_A 63 MQAKKVIDIGTFT-GYSAIAMGLA-LPKDGTLITCDVDEKSTALAKEYWEKAG-LSDKIGLRLSPAKDTLAELIHAGQAW 139 (225)
T ss_dssp HTCSEEEEECCTT-SHHHHHHHTT-CCTTCEEEEEESCHHHHHHHHHHHHHTT-CTTTEEEEESCHHHHHHHHHTTTCTT
T ss_pred hCCCEEEEeCCcc-hHHHHHHHHh-CCCCCEEEEEeCCHHHHHHHHHHHHHCC-CCCceEEEeCCHHHHHHHhhhccCCC
Confidence 4678999999996 7788889983 44 8999999999999999999999999 7788999999997754332 5
Q ss_pred CcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEeec
Q 042119 202 EYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRSA 241 (286)
Q Consensus 202 ~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~~ 241 (286)
.||+||+++. .+....+++.+.+.|+|||++++.+.
T Consensus 140 ~fD~v~~~~~----~~~~~~~l~~~~~~L~pgG~lv~~~~ 175 (225)
T 3tr6_A 140 QYDLIYIDAD----KANTDLYYEESLKLLREGGLIAVDNV 175 (225)
T ss_dssp CEEEEEECSC----GGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred CccEEEECCC----HHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 7999997654 35677899999999999999999763
No 21
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.60 E-value=1.7e-15 Score=134.20 Aligned_cols=110 Identities=16% Similarity=0.177 Sum_probs=90.1
Q ss_pred hcCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcC--CC
Q 042119 125 ENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQL--GE 202 (286)
Q Consensus 125 ~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l--~~ 202 (286)
+....++.|||+|||| .|.++..+++ ..+.+||+||+||++++.|++..+..+ .+++++.+|+.++...+ ..
T Consensus 55 ~~~~~~G~rVLdiG~G-~G~~~~~~~~--~~~~~v~~id~~~~~~~~a~~~~~~~~---~~~~~~~~~a~~~~~~~~~~~ 128 (236)
T 3orh_A 55 AAASSKGGRVLEVGFG-MAIAASKVQE--APIDEHWIIECNDGVFQRLRDWAPRQT---HKVIPLKGLWEDVAPTLPDGH 128 (236)
T ss_dssp HHHTTTCEEEEEECCT-TSHHHHHHTT--SCEEEEEEEECCHHHHHHHHHHGGGCS---SEEEEEESCHHHHGGGSCTTC
T ss_pred HhhccCCCeEEEECCC-ccHHHHHHHH--hCCcEEEEEeCCHHHHHHHHHHHhhCC---CceEEEeehHHhhcccccccC
Confidence 3345788999999999 5888999988 356899999999999999999988877 47899999998765444 46
Q ss_pred cceeehhhhc----cCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 203 YDCIFLAALV----GMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 203 fD~V~~aalv----g~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
||.|+++..+ ..+..++..++++++|+|||||++++-+
T Consensus 129 FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 129 FDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp EEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred CceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence 9999865432 3345688899999999999999998865
No 22
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.59 E-value=3.3e-15 Score=132.47 Aligned_cols=107 Identities=21% Similarity=0.293 Sum_probs=91.6
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhc-------CC
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQ-------LG 201 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~-------l~ 201 (286)
.++++||+||||+ |.+++++|+...++++|+++|+|+++++.|++.+++.| +.++++++++|+.+.... .+
T Consensus 69 ~~~~~VLeiG~G~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g-~~~~i~~~~gda~~~l~~l~~~~~~~~ 146 (237)
T 3c3y_A 69 VNAKKTIEVGVFT-GYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAG-VEHKINFIESDAMLALDNLLQGQESEG 146 (237)
T ss_dssp TTCCEEEEECCTT-SHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTT-CGGGEEEEESCHHHHHHHHHHSTTCTT
T ss_pred hCCCEEEEeCCCC-CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC-CCCcEEEEEcCHHHHHHHHHhccCCCC
Confidence 4678999999995 88899999843338999999999999999999999999 678999999999876432 35
Q ss_pred CcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEeec
Q 042119 202 EYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRSA 241 (286)
Q Consensus 202 ~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~~ 241 (286)
.||+||+++.. +....+++.+.+.|+|||++++.+.
T Consensus 147 ~fD~I~~d~~~----~~~~~~l~~~~~~L~pGG~lv~d~~ 182 (237)
T 3c3y_A 147 SYDFGFVDADK----PNYIKYHERLMKLVKVGGIVAYDNT 182 (237)
T ss_dssp CEEEEEECSCG----GGHHHHHHHHHHHEEEEEEEEEECT
T ss_pred CcCEEEECCch----HHHHHHHHHHHHhcCCCeEEEEecC
Confidence 79999987543 5778899999999999999999873
No 23
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.59 E-value=1e-14 Score=130.76 Aligned_cols=140 Identities=9% Similarity=0.065 Sum_probs=103.8
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhc---CCCcce
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQ---LGEYDC 205 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~---l~~fD~ 205 (286)
.++.+|||||||+ |..++.+|+ ..++++|+++|+|+++++.|+++++..| +. +++|+++|+.++... .+.||+
T Consensus 79 ~~~~~vLDiG~G~-G~~~i~la~-~~~~~~v~~vD~s~~~~~~a~~~~~~~~-l~-~v~~~~~d~~~~~~~~~~~~~fD~ 154 (249)
T 3g89_A 79 QGPLRVLDLGTGA-GFPGLPLKI-VRPELELVLVDATRKKVAFVERAIEVLG-LK-GARALWGRAEVLAREAGHREAYAR 154 (249)
T ss_dssp CSSCEEEEETCTT-TTTHHHHHH-HCTTCEEEEEESCHHHHHHHHHHHHHHT-CS-SEEEEECCHHHHTTSTTTTTCEEE
T ss_pred CCCCEEEEEcCCC-CHHHHHHHH-HCCCCEEEEEECCHHHHHHHHHHHHHhC-CC-ceEEEECcHHHhhcccccCCCceE
Confidence 5678999999996 788888998 4789999999999999999999999999 54 599999999887653 257999
Q ss_pred eehhhhccCChhHHHHHHHHHHhhccCCcEEEEeecCcceeeecccCCcc----cccCcEEEE---EecCcccceeeeEE
Q 042119 206 IFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRSAKGARAFLYPVVVEH----DLLDFEVLS---AVHPNDDVINSVVL 278 (286)
Q Consensus 206 V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~~~g~r~~lyp~v~~~----~l~gf~~~~---~~~P~~~vinsvi~ 278 (286)
|+..+. .+...+++.+.+.|+|||++++-.+... .+.+... ...||++.. ...|..+-.-.+++
T Consensus 155 I~s~a~-----~~~~~ll~~~~~~LkpgG~l~~~~g~~~----~~e~~~~~~~l~~~G~~~~~~~~~~~p~~~~~R~l~~ 225 (249)
T 3g89_A 155 AVARAV-----APLCVLSELLLPFLEVGGAAVAMKGPRV----EEELAPLPPALERLGGRLGEVLALQLPLSGEARHLVV 225 (249)
T ss_dssp EEEESS-----CCHHHHHHHHGGGEEEEEEEEEEECSCC----HHHHTTHHHHHHHHTEEEEEEEEEECTTTCCEEEEEE
T ss_pred EEECCc-----CCHHHHHHHHHHHcCCCeEEEEEeCCCc----HHHHHHHHHHHHHcCCeEEEEEEeeCCCCCCcEEEEE
Confidence 997654 3456899999999999999887543211 0111110 113776543 33576555556777
Q ss_pred Eee
Q 042119 279 VRN 281 (286)
Q Consensus 279 ~r~ 281 (286)
.+|
T Consensus 226 ~~k 228 (249)
T 3g89_A 226 LEK 228 (249)
T ss_dssp EEE
T ss_pred EEe
Confidence 776
No 24
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.59 E-value=2e-14 Score=130.07 Aligned_cols=109 Identities=13% Similarity=0.195 Sum_probs=90.6
Q ss_pred CCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCccee
Q 042119 127 GVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCI 206 (286)
Q Consensus 127 ~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V 206 (286)
...++.+|||||||+ |..+..+++. .|++|+|+|+|+.+++.|++.++..| +.++++|+++|+.+++...+.||+|
T Consensus 79 ~~~~~~~vLDiGcG~-G~~~~~l~~~--~~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~fD~v 154 (297)
T 2o57_A 79 VLQRQAKGLDLGAGY-GGAARFLVRK--FGVSIDCLNIAPVQNKRNEEYNNQAG-LADNITVKYGSFLEIPCEDNSYDFI 154 (297)
T ss_dssp CCCTTCEEEEETCTT-SHHHHHHHHH--HCCEEEEEESCHHHHHHHHHHHHHHT-CTTTEEEEECCTTSCSSCTTCEEEE
T ss_pred CCCCCCEEEEeCCCC-CHHHHHHHHH--hCCEEEEEeCCHHHHHHHHHHHHhcC-CCcceEEEEcCcccCCCCCCCEeEE
Confidence 457889999999996 5566677773 37899999999999999999999999 7789999999998877655689999
Q ss_pred ehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 207 FLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 207 ~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
+....+.+ .+++..+++++.+.|||||.+++.+
T Consensus 155 ~~~~~l~~-~~~~~~~l~~~~~~LkpgG~l~~~~ 187 (297)
T 2o57_A 155 WSQDAFLH-SPDKLKVFQECARVLKPRGVMAITD 187 (297)
T ss_dssp EEESCGGG-CSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred Eecchhhh-cCCHHHHHHHHHHHcCCCeEEEEEE
Confidence 86543321 2457889999999999999999976
No 25
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.59 E-value=7.9e-15 Score=126.82 Aligned_cols=109 Identities=12% Similarity=0.227 Sum_probs=87.9
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCC----CeEEEEccccchhhcCCCcc
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEG----RMKFLTRDIMEVKEQLGEYD 204 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~----~i~f~~~D~~~~~~~l~~fD 204 (286)
.++.+|||||||+ |..+..+++ ..+..+|+|+|+|+++++.|++.+...+ +.+ +++|+++|+...+...+.||
T Consensus 28 ~~~~~vLDiGcG~-G~~~~~l~~-~~~~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~~~~~v~~~~~d~~~~~~~~~~fD 104 (219)
T 3jwg_A 28 VNAKKVIDLGCGE-GNLLSLLLK-DKSFEQITGVDVSYSVLERAKDRLKIDR-LPEMQRKRISLFQSSLVYRDKRFSGYD 104 (219)
T ss_dssp TTCCEEEEETCTT-CHHHHHHHT-STTCCEEEEEESCHHHHHHHHHHHTGGG-SCHHHHTTEEEEECCSSSCCGGGTTCS
T ss_pred cCCCEEEEecCCC-CHHHHHHHh-cCCCCEEEEEECCHHHHHHHHHHHHhhc-cccccCcceEEEeCcccccccccCCCC
Confidence 5678999999997 566677777 3556899999999999999999988877 544 89999999976665556899
Q ss_pred eeehhhhc-cCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 205 CIFLAALV-GMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 205 ~V~~aalv-g~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
+|+....+ ..+.++..++++++.+.|||||+++...
T Consensus 105 ~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~ 141 (219)
T 3jwg_A 105 AATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTP 141 (219)
T ss_dssp EEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred EEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEcc
Confidence 99865544 4455566789999999999999777653
No 26
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.59 E-value=1.1e-14 Score=129.85 Aligned_cols=107 Identities=19% Similarity=0.246 Sum_probs=91.0
Q ss_pred CCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceee
Q 042119 128 VVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIF 207 (286)
Q Consensus 128 ~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~ 207 (286)
..++.+|||||||+ |..++.+++. ++++|+|+|+|+.+++.|++.++..| +.++++|+++|+.+++...+.||+|+
T Consensus 44 ~~~~~~vLDiGcG~-G~~~~~la~~--~~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~~~~~~~fD~i~ 119 (267)
T 3kkz_A 44 LTEKSLIADIGCGT-GGQTMVLAGH--VTGQVTGLDFLSGFIDIFNRNARQSG-LQNRVTGIVGSMDDLPFRNEELDLIW 119 (267)
T ss_dssp CCTTCEEEEETCTT-CHHHHHHHTT--CSSEEEEEESCHHHHHHHHHHHHHTT-CTTTEEEEECCTTSCCCCTTCEEEEE
T ss_pred CCCCCEEEEeCCCC-CHHHHHHHhc--cCCEEEEEeCCHHHHHHHHHHHHHcC-CCcCcEEEEcChhhCCCCCCCEEEEE
Confidence 47889999999996 6677888873 77899999999999999999999999 78889999999988765556899999
Q ss_pred hhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 208 LAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 208 ~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
....+..- +..++++++.+.|||||.+++.+
T Consensus 120 ~~~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~ 150 (267)
T 3kkz_A 120 SEGAIYNI--GFERGLNEWRKYLKKGGYLAVSE 150 (267)
T ss_dssp ESSCGGGT--CHHHHHHHHGGGEEEEEEEEEEE
T ss_pred EcCCceec--CHHHHHHHHHHHcCCCCEEEEEE
Confidence 66544222 46789999999999999999875
No 27
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.59 E-value=8.8e-15 Score=128.04 Aligned_cols=106 Identities=18% Similarity=0.221 Sum_probs=88.0
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeeh
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFL 208 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~ 208 (286)
.++.+|||||||+ |..+..+++ ++.+|+|+|+|+.+++.|++.+...+ ...+++|+++|+.+.+. ...||+|+.
T Consensus 65 ~~~~~vLDiGcG~-G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~~~-~~~fD~v~~ 138 (235)
T 3lcc_A 65 LPLGRALVPGCGG-GHDVVAMAS---PERFVVGLDISESALAKANETYGSSP-KAEYFSFVKEDVFTWRP-TELFDLIFD 138 (235)
T ss_dssp SCCEEEEEETCTT-CHHHHHHCB---TTEEEEEECSCHHHHHHHHHHHTTSG-GGGGEEEECCCTTTCCC-SSCEEEEEE
T ss_pred CCCCCEEEeCCCC-CHHHHHHHh---CCCeEEEEECCHHHHHHHHHHhhccC-CCcceEEEECchhcCCC-CCCeeEEEE
Confidence 3456999999996 666677877 78999999999999999999988766 56789999999988653 347999986
Q ss_pred hhhc-cCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 209 AALV-GMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 209 aalv-g~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
.... .++.++...+++++.+.|+|||.+++..
T Consensus 139 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 171 (235)
T 3lcc_A 139 YVFFCAIEPEMRPAWAKSMYELLKPDGELITLM 171 (235)
T ss_dssp ESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEE
Confidence 5443 4455688899999999999999999865
No 28
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.59 E-value=5.2e-15 Score=130.54 Aligned_cols=109 Identities=14% Similarity=0.098 Sum_probs=90.2
Q ss_pred cCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcce
Q 042119 126 NGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDC 205 (286)
Q Consensus 126 ~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~ 205 (286)
..+.++.+|||||||+ |..+..+|+. .+++|+|+|+|+++++.|++.++..| +.++++|+++|+.+.+. .+.||+
T Consensus 32 ~~~~~~~~VLDiGcG~-G~~~~~la~~--~~~~v~gvD~s~~~l~~a~~~~~~~~-~~~~v~~~~~d~~~~~~-~~~fD~ 106 (256)
T 1nkv_A 32 LRMKPGTRILDLGSGS-GEMLCTWARD--HGITGTGIDMSSLFTAQAKRRAEELG-VSERVHFIHNDAAGYVA-NEKCDV 106 (256)
T ss_dssp TCCCTTCEEEEETCTT-CHHHHHHHHH--TCCEEEEEESCHHHHHHHHHHHHHTT-CTTTEEEEESCCTTCCC-SSCEEE
T ss_pred cCCCCCCEEEEECCCC-CHHHHHHHHh--cCCeEEEEeCCHHHHHHHHHHHHhcC-CCcceEEEECChHhCCc-CCCCCE
Confidence 3567889999999997 5667778773 38899999999999999999999999 67799999999988765 467999
Q ss_pred eehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 206 IFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 206 V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
|+...... ...+..++++++.+.|||||.+++..
T Consensus 107 V~~~~~~~-~~~~~~~~l~~~~r~LkpgG~l~~~~ 140 (256)
T 1nkv_A 107 AACVGATW-IAGGFAGAEELLAQSLKPGGIMLIGE 140 (256)
T ss_dssp EEEESCGG-GTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred EEECCChH-hcCCHHHHHHHHHHHcCCCeEEEEec
Confidence 98643321 22356789999999999999999975
No 29
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.58 E-value=1.3e-14 Score=120.71 Aligned_cols=108 Identities=16% Similarity=0.156 Sum_probs=88.2
Q ss_pred HhcCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcC-CC
Q 042119 124 SENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQL-GE 202 (286)
Q Consensus 124 ~~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l-~~ 202 (286)
....+.++.+|||||||+ |..++.+++ ..++.+|+++|+|+++++.|++.++..| +.+++ ++++|+.+..... +.
T Consensus 19 ~~~~~~~~~~vldiG~G~-G~~~~~l~~-~~~~~~v~~vD~~~~~~~~a~~~~~~~~-~~~~~-~~~~d~~~~~~~~~~~ 94 (178)
T 3hm2_A 19 SALAPKPHETLWDIGGGS-GSIAIEWLR-STPQTTAVCFEISEERRERILSNAINLG-VSDRI-AVQQGAPRAFDDVPDN 94 (178)
T ss_dssp HHHCCCTTEEEEEESTTT-THHHHHHHT-TSSSEEEEEECSCHHHHHHHHHHHHTTT-CTTSE-EEECCTTGGGGGCCSC
T ss_pred HHhcccCCCeEEEeCCCC-CHHHHHHHH-HCCCCeEEEEeCCHHHHHHHHHHHHHhC-CCCCE-EEecchHhhhhccCCC
Confidence 344567889999999997 677777887 4679999999999999999999999999 66689 8899986544333 68
Q ss_pred cceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 203 YDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 203 fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
||+|+....... .++++++.+.|+|||.+++..
T Consensus 95 ~D~i~~~~~~~~-----~~~l~~~~~~L~~gG~l~~~~ 127 (178)
T 3hm2_A 95 PDVIFIGGGLTA-----PGVFAAAWKRLPVGGRLVANA 127 (178)
T ss_dssp CSEEEECC-TTC-----TTHHHHHHHTCCTTCEEEEEE
T ss_pred CCEEEECCcccH-----HHHHHHHHHhcCCCCEEEEEe
Confidence 999997655432 579999999999999999865
No 30
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.58 E-value=8.4e-15 Score=129.27 Aligned_cols=107 Identities=18% Similarity=0.207 Sum_probs=90.2
Q ss_pred CCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceee
Q 042119 128 VVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIF 207 (286)
Q Consensus 128 ~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~ 207 (286)
..++.+|||||||+ |..+..+++. . +.+|+|+|+|+.+++.|++.+...| +.++++|+++|+.+++...+.||+|+
T Consensus 44 ~~~~~~vLDiG~G~-G~~~~~l~~~-~-~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~fD~v~ 119 (257)
T 3f4k_A 44 LTDDAKIADIGCGT-GGQTLFLADY-V-KGQITGIDLFPDFIEIFNENAVKAN-CADRVKGITGSMDNLPFQNEELDLIW 119 (257)
T ss_dssp CCTTCEEEEETCTT-SHHHHHHHHH-C-CSEEEEEESCHHHHHHHHHHHHHTT-CTTTEEEEECCTTSCSSCTTCEEEEE
T ss_pred CCCCCeEEEeCCCC-CHHHHHHHHh-C-CCeEEEEECCHHHHHHHHHHHHHcC-CCCceEEEECChhhCCCCCCCEEEEE
Confidence 46788999999996 6667778873 3 3599999999999999999999999 78889999999988776556899999
Q ss_pred hhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 208 LAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 208 ~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
....+.+- +..++++++.+.|+|||++++.+
T Consensus 120 ~~~~l~~~--~~~~~l~~~~~~L~pgG~l~~~~ 150 (257)
T 3f4k_A 120 SEGAIYNI--GFERGMNEWSKYLKKGGFIAVSE 150 (257)
T ss_dssp EESCSCCC--CHHHHHHHHHTTEEEEEEEEEEE
T ss_pred ecChHhhc--CHHHHHHHHHHHcCCCcEEEEEE
Confidence 76544332 46789999999999999999976
No 31
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.58 E-value=4.6e-15 Score=128.03 Aligned_cols=106 Identities=19% Similarity=0.301 Sum_probs=89.3
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCC-CcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceee
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLT-STHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIF 207 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~-g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~ 207 (286)
.++++||+||||+ |.+++.+|+. .+ +++|+++|+|+++++.|++.++..| +.++++|+++|+.+....+.+||+||
T Consensus 55 ~~~~~vLdiG~G~-G~~~~~la~~-~~~~~~v~~vD~~~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~~~~~~~fD~v~ 131 (210)
T 3c3p_A 55 KQPQLVVVPGDGL-GCASWWFARA-ISISSRVVMIDPDRDNVEHARRMLHDNG-LIDRVELQVGDPLGIAAGQRDIDILF 131 (210)
T ss_dssp HCCSEEEEESCGG-GHHHHHHHTT-SCTTCEEEEEESCHHHHHHHHHHHHHHS-GGGGEEEEESCHHHHHTTCCSEEEEE
T ss_pred hCCCEEEEEcCCc-cHHHHHHHHh-CCCCCEEEEEECCHHHHHHHHHHHHHCC-CCceEEEEEecHHHHhccCCCCCEEE
Confidence 3678999999995 8888999983 45 8999999999999999999999999 67889999999987543332299999
Q ss_pred hhhhccCChhHHHHHHHHHHhhccCCcEEEEeec
Q 042119 208 LAALVGMSKEEKLTILGHIRKYMKDGGILLVRSA 241 (286)
Q Consensus 208 ~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~~ 241 (286)
.++.. .....+++.+.+.|+|||++++.+.
T Consensus 132 ~~~~~----~~~~~~l~~~~~~LkpgG~lv~~~~ 161 (210)
T 3c3p_A 132 MDCDV----FNGADVLERMNRCLAKNALLIAVNA 161 (210)
T ss_dssp EETTT----SCHHHHHHHHGGGEEEEEEEEEESS
T ss_pred EcCCh----hhhHHHHHHHHHhcCCCeEEEEECc
Confidence 87543 5667899999999999999999763
No 32
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.58 E-value=5.8e-15 Score=128.67 Aligned_cols=109 Identities=15% Similarity=0.243 Sum_probs=88.3
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcC------CC
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQL------GE 202 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l------~~ 202 (286)
.++++||+||||+ |.+++.+|+...++++|+++|+|+++++.|++.++..| +.++++|+++|+.+....+ +.
T Consensus 57 ~~~~~vLdiG~G~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~l~~~~~~~~~~~ 134 (221)
T 3u81_A 57 YSPSLVLELGAYC-GYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAG-LQDKVTILNGASQDLIPQLKKKYDVDT 134 (221)
T ss_dssp HCCSEEEEECCTT-SHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHT-CGGGEEEEESCHHHHGGGTTTTSCCCC
T ss_pred cCCCEEEEECCCC-CHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcC-CCCceEEEECCHHHHHHHHHHhcCCCc
Confidence 4678999999996 78889999843358999999999999999999999999 7788999999997754443 47
Q ss_pred cceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEeec
Q 042119 203 YDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRSA 241 (286)
Q Consensus 203 fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~~ 241 (286)
||+||+++.... ..+..++++.+ +.|+|||++++.+.
T Consensus 135 fD~V~~d~~~~~-~~~~~~~~~~~-~~LkpgG~lv~~~~ 171 (221)
T 3u81_A 135 LDMVFLDHWKDR-YLPDTLLLEKC-GLLRKGTVLLADNV 171 (221)
T ss_dssp CSEEEECSCGGG-HHHHHHHHHHT-TCCCTTCEEEESCC
T ss_pred eEEEEEcCCccc-chHHHHHHHhc-cccCCCeEEEEeCC
Confidence 999998764321 13344677777 99999999999763
No 33
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.58 E-value=2.3e-14 Score=127.74 Aligned_cols=114 Identities=14% Similarity=0.249 Sum_probs=93.7
Q ss_pred HHHhcCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCC
Q 042119 122 ILSENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLG 201 (286)
Q Consensus 122 ~l~~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~ 201 (286)
++......++.+|||||||+ |..+..++++ .+++|+|+|+|+++++.|++.+...| +.++++|+++|+.+++...+
T Consensus 53 l~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~--~~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~~~~~~~d~~~~~~~~~ 128 (273)
T 3bus_A 53 MIALLDVRSGDRVLDVGCGI-GKPAVRLATA--RDVRVTGISISRPQVNQANARATAAG-LANRVTFSYADAMDLPFEDA 128 (273)
T ss_dssp HHHHSCCCTTCEEEEESCTT-SHHHHHHHHH--SCCEEEEEESCHHHHHHHHHHHHHTT-CTTTEEEEECCTTSCCSCTT
T ss_pred HHHhcCCCCCCEEEEeCCCC-CHHHHHHHHh--cCCEEEEEeCCHHHHHHHHHHHHhcC-CCcceEEEECccccCCCCCC
Confidence 34455667889999999997 5566777773 48999999999999999999999999 67899999999988766556
Q ss_pred CcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 202 EYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 202 ~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
.||+|+....+. +.+++..+++++.+.|||||.+++.+
T Consensus 129 ~fD~v~~~~~l~-~~~~~~~~l~~~~~~L~pgG~l~i~~ 166 (273)
T 3bus_A 129 SFDAVWALESLH-HMPDRGRALREMARVLRPGGTVAIAD 166 (273)
T ss_dssp CEEEEEEESCTT-TSSCHHHHHHHHHTTEEEEEEEEEEE
T ss_pred CccEEEEechhh-hCCCHHHHHHHHHHHcCCCeEEEEEE
Confidence 899998654432 22466789999999999999999876
No 34
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.57 E-value=9.8e-15 Score=124.79 Aligned_cols=108 Identities=22% Similarity=0.319 Sum_probs=90.0
Q ss_pred CCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCccee
Q 042119 127 GVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCI 206 (286)
Q Consensus 127 ~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V 206 (286)
...++ +|||||||+ |..+..++++ ++.+|+++|+|+++++.|++.+...| +..+++|+++|+.+++...+.||+|
T Consensus 41 ~~~~~-~vLdiG~G~-G~~~~~l~~~--~~~~v~~~D~s~~~~~~a~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~D~v 115 (219)
T 3dlc_A 41 GITAG-TCIDIGSGP-GALSIALAKQ--SDFSIRALDFSKHMNEIALKNIADAN-LNDRIQIVQGDVHNIPIEDNYADLI 115 (219)
T ss_dssp CCCEE-EEEEETCTT-SHHHHHHHHH--SEEEEEEEESCHHHHHHHHHHHHHTT-CTTTEEEEECBTTBCSSCTTCEEEE
T ss_pred CCCCC-EEEEECCCC-CHHHHHHHHc--CCCeEEEEECCHHHHHHHHHHHHhcc-ccCceEEEEcCHHHCCCCcccccEE
Confidence 33444 999999997 6667778773 78999999999999999999999999 6789999999998877655689999
Q ss_pred ehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 207 FLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 207 ~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
+......+ .++..++++++.+.|+|||.+++.+
T Consensus 116 ~~~~~l~~-~~~~~~~l~~~~~~L~pgG~l~~~~ 148 (219)
T 3dlc_A 116 VSRGSVFF-WEDVATAFREIYRILKSGGKTYIGG 148 (219)
T ss_dssp EEESCGGG-CSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EECchHhh-ccCHHHHHHHHHHhCCCCCEEEEEe
Confidence 97654322 2567789999999999999999975
No 35
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.57 E-value=4.4e-14 Score=127.22 Aligned_cols=104 Identities=17% Similarity=0.255 Sum_probs=87.4
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeeh
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFL 208 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~ 208 (286)
.++.+|||||||+ |..+..+++ .|.+|+|+|+|+.+++.|++.+...| + +++|+++|+.+.+. .+.||+|+.
T Consensus 119 ~~~~~vLD~GcG~-G~~~~~l~~---~g~~v~~vD~s~~~~~~a~~~~~~~~-~--~~~~~~~d~~~~~~-~~~fD~i~~ 190 (286)
T 3m70_A 119 ISPCKVLDLGCGQ-GRNSLYLSL---LGYDVTSWDHNENSIAFLNETKEKEN-L--NISTALYDINAANI-QENYDFIVS 190 (286)
T ss_dssp SCSCEEEEESCTT-CHHHHHHHH---TTCEEEEEESCHHHHHHHHHHHHHTT-C--CEEEEECCGGGCCC-CSCEEEEEE
T ss_pred cCCCcEEEECCCC-CHHHHHHHH---CCCeEEEEECCHHHHHHHHHHHHHcC-C--ceEEEEeccccccc-cCCccEEEE
Confidence 4789999999996 666778888 48899999999999999999999988 4 89999999987655 457999987
Q ss_pred hhhc-cCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 209 AALV-GMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 209 aalv-g~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
.... ..+.+....+++++.+.|+|||.+++..
T Consensus 191 ~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 223 (286)
T 3m70_A 191 TVVFMFLNRERVPSIIKNMKEHTNVGGYNLIVA 223 (286)
T ss_dssp CSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ccchhhCCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 6443 3455677799999999999999977654
No 36
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.57 E-value=3.1e-14 Score=121.11 Aligned_cols=113 Identities=13% Similarity=0.119 Sum_probs=90.2
Q ss_pred CCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcC-CCcce
Q 042119 127 GVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQL-GEYDC 205 (286)
Q Consensus 127 ~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l-~~fD~ 205 (286)
...++.+|||+|||+ |..++.++++..++++|+++|+|+++++.|++.++..| +.++++|+++|+.+++... +.||+
T Consensus 19 ~~~~~~~vLDlGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~~~~~~~~fD~ 96 (197)
T 3eey_A 19 FVKEGDTVVDATCGN-GNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLN-LIDRVTLIKDGHQNMDKYIDCPVKA 96 (197)
T ss_dssp HCCTTCEEEESCCTT-SHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTT-CGGGEEEECSCGGGGGGTCCSCEEE
T ss_pred cCCCCCEEEEcCCCC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC-CCCCeEEEECCHHHHhhhccCCceE
Confidence 457789999999997 56667777743366899999999999999999999998 6789999999998876333 57999
Q ss_pred eehhhhc--------cCChhHHHHHHHHHHhhccCCcEEEEeec
Q 042119 206 IFLAALV--------GMSKEEKLTILGHIRKYMKDGGILLVRSA 241 (286)
Q Consensus 206 V~~aalv--------g~~~~~k~~vl~~l~~~l~pgg~lv~r~~ 241 (286)
|+..... ....+...++++++.+.|+|||++++...
T Consensus 97 v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 140 (197)
T 3eey_A 97 VMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIY 140 (197)
T ss_dssp EEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEc
Confidence 9865321 11233556799999999999999998763
No 37
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.57 E-value=1.6e-14 Score=124.81 Aligned_cols=109 Identities=9% Similarity=0.149 Sum_probs=88.1
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCC----CeEEEEccccchhhcCCCcc
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEG----RMKFLTRDIMEVKEQLGEYD 204 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~----~i~f~~~D~~~~~~~l~~fD 204 (286)
.++.+|||||||+ |..+..+++ ..+..+|+|+|+|+++++.|++.+...| +.+ +++|+++|+...+...+.||
T Consensus 28 ~~~~~vLDiGcG~-G~~~~~l~~-~~~~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~~~~~v~~~~~d~~~~~~~~~~fD 104 (217)
T 3jwh_A 28 SNARRVIDLGCGQ-GNLLKILLK-DSFFEQITGVDVSYRSLEIAQERLDRLR-LPRNQWERLQLIQGALTYQDKRFHGYD 104 (217)
T ss_dssp TTCCEEEEETCTT-CHHHHHHHH-CTTCSEEEEEESCHHHHHHHHHHHTTCC-CCHHHHTTEEEEECCTTSCCGGGCSCS
T ss_pred cCCCEEEEeCCCC-CHHHHHHHh-hCCCCEEEEEECCHHHHHHHHHHHHHhc-CCcccCcceEEEeCCcccccccCCCcC
Confidence 5678999999997 556677777 3556899999999999999999998887 554 89999999866555556899
Q ss_pred eeehhhhc-cCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 205 CIFLAALV-GMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 205 ~V~~aalv-g~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
+|+....+ .++.++..++++++.+.|||||+++...
T Consensus 105 ~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 141 (217)
T 3jwh_A 105 AATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTP 141 (217)
T ss_dssp EEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred EEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 99965544 4455566899999999999999877754
No 38
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.57 E-value=1.8e-14 Score=130.96 Aligned_cols=112 Identities=14% Similarity=0.081 Sum_probs=91.5
Q ss_pred HHhcCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhc-CCCCCCeEEEEccccchhhcC-
Q 042119 123 LSENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASD-AEFEGRMKFLTRDIMEVKEQL- 200 (286)
Q Consensus 123 l~~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~-g~l~~~i~f~~~D~~~~~~~l- 200 (286)
+......++.+|||||||+ |..+..+++...++.+|+|+|+|+.+++.|++.++.. | ...+++|+++|+.+++...
T Consensus 29 l~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-~~~~v~~~~~d~~~~~~~~~ 106 (299)
T 3g5t_A 29 IDEYHDGERKLLVDVGCGP-GTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPD-TYKNVSFKISSSDDFKFLGA 106 (299)
T ss_dssp HHHHCCSCCSEEEEETCTT-THHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC--CCTTEEEEECCTTCCGGGCT
T ss_pred HHHHhcCCCCEEEEECCCC-CHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccC-CCCceEEEEcCHHhCCcccc
Confidence 3344456889999999996 6677788862228999999999999999999999987 4 4579999999999877665
Q ss_pred -----CCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEE
Q 042119 201 -----GEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLV 238 (286)
Q Consensus 201 -----~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~ 238 (286)
+.||+|+....+++- +..++++++.+.|+|||.+++
T Consensus 107 ~~~~~~~fD~V~~~~~l~~~--~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 107 DSVDKQKIDMITAVECAHWF--DFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp TTTTSSCEEEEEEESCGGGS--CHHHHHHHHHHHEEEEEEEEE
T ss_pred ccccCCCeeEEeHhhHHHHh--CHHHHHHHHHHhcCCCcEEEE
Confidence 689999976544333 677899999999999999988
No 39
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.57 E-value=4.6e-14 Score=122.88 Aligned_cols=103 Identities=11% Similarity=0.149 Sum_probs=85.8
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeeh
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFL 208 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~ 208 (286)
.++.+||+||||+ |..+..+++ .+.+|+++|+|+.+++.|++.....| + +++|+++|+.+.+.+ +.||+|+.
T Consensus 36 ~~~~~vLdiG~G~-G~~~~~l~~---~~~~~~~~D~s~~~~~~a~~~~~~~~-~--~~~~~~~d~~~~~~~-~~fD~v~~ 107 (246)
T 1y8c_A 36 LVFDDYLDLACGT-GNLTENLCP---KFKNTWAVDLSQEMLSEAENKFRSQG-L--KPRLACQDISNLNIN-RKFDLITC 107 (246)
T ss_dssp CCTTEEEEETCTT-STTHHHHGG---GSSEEEEECSCHHHHHHHHHHHHHTT-C--CCEEECCCGGGCCCS-CCEEEEEE
T ss_pred CCCCeEEEeCCCC-CHHHHHHHH---CCCcEEEEECCHHHHHHHHHHHhhcC-C--CeEEEecccccCCcc-CCceEEEE
Confidence 4778999999997 556677877 47899999999999999999998877 3 799999999886655 68999997
Q ss_pred hh-hc-cC-ChhHHHHHHHHHHhhccCCcEEEEe
Q 042119 209 AA-LV-GM-SKEEKLTILGHIRKYMKDGGILLVR 239 (286)
Q Consensus 209 aa-lv-g~-~~~~k~~vl~~l~~~l~pgg~lv~r 239 (286)
.. .+ .+ +.++..++++++.+.|+|||.+++.
T Consensus 108 ~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 141 (246)
T 1y8c_A 108 CLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFD 141 (246)
T ss_dssp CTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred cCccccccCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 54 33 33 3367789999999999999999984
No 40
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.56 E-value=2.6e-14 Score=128.67 Aligned_cols=111 Identities=13% Similarity=0.154 Sum_probs=91.1
Q ss_pred HHhcCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCC
Q 042119 123 LSENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGE 202 (286)
Q Consensus 123 l~~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~ 202 (286)
+......++.+|||||||+ |..+..+++. .|.+|+|+|+|+++++.|++.+...| +.++++++++|+.+++ +.
T Consensus 57 ~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~--~~~~v~gvd~s~~~~~~a~~~~~~~~-~~~~~~~~~~d~~~~~---~~ 129 (287)
T 1kpg_A 57 LGKLGLQPGMTLLDVGCGW-GATMMRAVEK--YDVNVVGLTLSKNQANHVQQLVANSE-NLRSKRVLLAGWEQFD---EP 129 (287)
T ss_dssp HTTTTCCTTCEEEEETCTT-SHHHHHHHHH--HCCEEEEEESCHHHHHHHHHHHHTCC-CCSCEEEEESCGGGCC---CC
T ss_pred HHHcCCCCcCEEEEECCcc-cHHHHHHHHH--cCCEEEEEECCHHHHHHHHHHHHhcC-CCCCeEEEECChhhCC---CC
Confidence 3344567889999999997 5566777753 46799999999999999999999988 6789999999997654 68
Q ss_pred cceeehhhhc-cCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 203 YDCIFLAALV-GMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 203 fD~V~~aalv-g~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
||+|+....+ .++.++...+++++.+.|||||.+++..
T Consensus 130 fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 168 (287)
T 1kpg_A 130 VDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHT 168 (287)
T ss_dssp CSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred eeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 9999865433 3344677889999999999999999975
No 41
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.56 E-value=9.1e-15 Score=128.95 Aligned_cols=107 Identities=19% Similarity=0.231 Sum_probs=90.5
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcC------CC
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQL------GE 202 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l------~~ 202 (286)
.++++||+|||| .|.+++.+|+...++++|+++|+|+++++.|++.++..| +.++++|+++|+.+....+ +.
T Consensus 71 ~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g-~~~~i~~~~~d~~~~l~~l~~~~~~~~ 148 (232)
T 3cbg_A 71 TGAKQVLEIGVF-RGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAG-VAEKISLRLGPALATLEQLTQGKPLPE 148 (232)
T ss_dssp HTCCEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHT-CGGGEEEEESCHHHHHHHHHTSSSCCC
T ss_pred cCCCEEEEecCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC-CCCcEEEEEcCHHHHHHHHHhcCCCCC
Confidence 467899999999 588999999842237899999999999999999999999 6778999999987643322 57
Q ss_pred cceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEeec
Q 042119 203 YDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRSA 241 (286)
Q Consensus 203 fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~~ 241 (286)
||+||+++. .++...+++.+.+.|+|||++++.+.
T Consensus 149 fD~V~~d~~----~~~~~~~l~~~~~~LkpgG~lv~~~~ 183 (232)
T 3cbg_A 149 FDLIFIDAD----KRNYPRYYEIGLNLLRRGGLMVIDNV 183 (232)
T ss_dssp EEEEEECSC----GGGHHHHHHHHHHTEEEEEEEEEECT
T ss_pred cCEEEECCC----HHHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 999997754 36778899999999999999999863
No 42
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.56 E-value=4e-14 Score=128.82 Aligned_cols=112 Identities=13% Similarity=0.052 Sum_probs=91.7
Q ss_pred HHHhcCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCC
Q 042119 122 ILSENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLG 201 (286)
Q Consensus 122 ~l~~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~ 201 (286)
.+....+.++.+|||||||+ |..++.++++ .|++|+|+|+|+++++.|++.+...| +.++++|+++|+.++ .+
T Consensus 64 ~~~~~~~~~~~~vLDiGcG~-G~~~~~la~~--~~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~---~~ 136 (302)
T 3hem_A 64 ALDKLNLEPGMTLLDIGCGW-GSTMRHAVAE--YDVNVIGLTLSENQYAHDKAMFDEVD-SPRRKEVRIQGWEEF---DE 136 (302)
T ss_dssp HHHTTCCCTTCEEEEETCTT-SHHHHHHHHH--HCCEEEEEECCHHHHHHHHHHHHHSC-CSSCEEEEECCGGGC---CC
T ss_pred HHHHcCCCCcCEEEEeeccC-cHHHHHHHHh--CCCEEEEEECCHHHHHHHHHHHHhcC-CCCceEEEECCHHHc---CC
Confidence 34455568889999999997 5566778773 36999999999999999999999999 778999999999775 36
Q ss_pred Ccceeehhhhc-cC-------ChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 202 EYDCIFLAALV-GM-------SKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 202 ~fD~V~~aalv-g~-------~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
.||+|+....+ .+ ..+....+++++.+.|||||++++.+
T Consensus 137 ~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 183 (302)
T 3hem_A 137 PVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHT 183 (302)
T ss_dssp CCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEE
T ss_pred CccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEE
Confidence 89999865433 33 22556789999999999999999976
No 43
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.56 E-value=1.5e-14 Score=128.46 Aligned_cols=108 Identities=15% Similarity=0.199 Sum_probs=87.7
Q ss_pred cCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcce
Q 042119 126 NGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDC 205 (286)
Q Consensus 126 ~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~ 205 (286)
....++.+|||||||+ |..+..+++ .+.+|+++|+|+++++.|++.++..|. .+++|+++|+.+++...+.||+
T Consensus 33 l~~~~~~~vLDiGcG~-G~~~~~l~~---~~~~v~gvD~s~~~l~~a~~~~~~~~~--~~v~~~~~d~~~l~~~~~~fD~ 106 (260)
T 1vl5_A 33 AALKGNEEVLDVATGG-GHVANAFAP---FVKKVVAFDLTEDILKVARAFIEGNGH--QQVEYVQGDAEQMPFTDERFHI 106 (260)
T ss_dssp HTCCSCCEEEEETCTT-CHHHHHHGG---GSSEEEEEESCHHHHHHHHHHHHHTTC--CSEEEEECCC-CCCSCTTCEEE
T ss_pred hCCCCCCEEEEEeCCC-CHHHHHHHH---hCCEEEEEeCCHHHHHHHHHHHHhcCC--CceEEEEecHHhCCCCCCCEEE
Confidence 3457889999999996 566677877 346999999999999999999998883 5799999999887765568999
Q ss_pred eehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 206 IFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 206 V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
|+....+.+ .++...++.++.+.|||||.+++.+
T Consensus 107 V~~~~~l~~-~~d~~~~l~~~~r~LkpgG~l~~~~ 140 (260)
T 1vl5_A 107 VTCRIAAHH-FPNPASFVSEAYRVLKKGGQLLLVD 140 (260)
T ss_dssp EEEESCGGG-CSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEhhhhHh-cCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 996643322 2466789999999999999999864
No 44
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.55 E-value=2e-14 Score=122.85 Aligned_cols=106 Identities=14% Similarity=0.167 Sum_probs=88.1
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeeh
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFL 208 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~ 208 (286)
.++.+|||||||++..+...+++ +|.+|+++|+|+++++.|++.+...+ .+++++++|+.+.+...+.||+|+.
T Consensus 22 ~~~~~vLDiGcG~G~~~~~~~~~---~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~~d~~~~~~~~~~fD~v~~ 95 (209)
T 2p8j_A 22 NLDKTVLDCGAGGDLPPLSIFVE---DGYKTYGIEISDLQLKKAENFSRENN---FKLNISKGDIRKLPFKDESMSFVYS 95 (209)
T ss_dssp SSCSEEEEESCCSSSCTHHHHHH---TTCEEEEEECCHHHHHHHHHHHHHHT---CCCCEEECCTTSCCSCTTCEEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHh---CCCEEEEEECCHHHHHHHHHHHHhcC---CceEEEECchhhCCCCCCceeEEEE
Confidence 56789999999976555666666 78999999999999999999998877 4799999999886655567999986
Q ss_pred hhhc-cCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 209 AALV-GMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 209 aalv-g~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
.... +++.++..++++++.+.|+|||.+++..
T Consensus 96 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 128 (209)
T 2p8j_A 96 YGTIFHMRKNDVKEAIDEIKRVLKPGGLACINF 128 (209)
T ss_dssp CSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 5332 4455788899999999999999999875
No 45
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.55 E-value=1.9e-14 Score=130.78 Aligned_cols=106 Identities=9% Similarity=0.182 Sum_probs=86.9
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCC--CCeEEEEccccchhhcCCCccee
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFE--GRMKFLTRDIMEVKEQLGEYDCI 206 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~--~~i~f~~~D~~~~~~~l~~fD~V 206 (286)
.++.+|||||||+ |..+..+++ .|.+|+|+|+|+.+++.|++.+...| +. .+++|+++|+.+++. .+.||+|
T Consensus 81 ~~~~~vLDlGcG~-G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~~~v~~~~~d~~~~~~-~~~fD~v 154 (299)
T 3g2m_A 81 PVSGPVLELAAGM-GRLTFPFLD---LGWEVTALELSTSVLAAFRKRLAEAP-ADVRDRCTLVQGDMSAFAL-DKRFGTV 154 (299)
T ss_dssp CCCSCEEEETCTT-TTTHHHHHT---TTCCEEEEESCHHHHHHHHHHHHTSC-HHHHTTEEEEECBTTBCCC-SCCEEEE
T ss_pred CCCCcEEEEeccC-CHHHHHHHH---cCCeEEEEECCHHHHHHHHHHHhhcc-cccccceEEEeCchhcCCc-CCCcCEE
Confidence 4456999999996 667788887 48899999999999999999998876 33 689999999988665 3579988
Q ss_pred ehh-hhc-cCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 207 FLA-ALV-GMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 207 ~~a-alv-g~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
++. ... ..+.++..++++++.+.|+|||++++..
T Consensus 155 ~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 190 (299)
T 3g2m_A 155 VISSGSINELDEADRRGLYASVREHLEPGGKFLLSL 190 (299)
T ss_dssp EECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEe
Confidence 754 323 3355567899999999999999999965
No 46
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.55 E-value=1.3e-13 Score=128.73 Aligned_cols=112 Identities=22% Similarity=0.272 Sum_probs=91.4
Q ss_pred HHhcCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCC
Q 042119 123 LSENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGE 202 (286)
Q Consensus 123 l~~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~ 202 (286)
+......++.+|||||||+ |..+..+++ .+|+.+++++|+ +++++.|++.++..| +.++++|+.+|+.+.+ ..+
T Consensus 183 ~~~~~~~~~~~vLDvG~G~-G~~~~~l~~-~~p~~~~~~~D~-~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~~--~~~ 256 (359)
T 1x19_A 183 LEEAKLDGVKKMIDVGGGI-GDISAAMLK-HFPELDSTILNL-PGAIDLVNENAAEKG-VADRMRGIAVDIYKES--YPE 256 (359)
T ss_dssp HHHCCCTTCCEEEEESCTT-CHHHHHHHH-HCTTCEEEEEEC-GGGHHHHHHHHHHTT-CTTTEEEEECCTTTSC--CCC
T ss_pred HHhcCCCCCCEEEEECCcc-cHHHHHHHH-HCCCCeEEEEec-HHHHHHHHHHHHhcC-CCCCEEEEeCccccCC--CCC
Confidence 3344557889999999997 556677777 478999999999 999999999999988 6788999999997643 345
Q ss_pred cceeehhhhc-cCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 203 YDCIFLAALV-GMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 203 fD~V~~aalv-g~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
+|+|+..... .++.+...++++++.+.|+|||.+++.+
T Consensus 257 ~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e 295 (359)
T 1x19_A 257 ADAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILD 295 (359)
T ss_dssp CSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEE
T ss_pred CCEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 6999876544 4565668899999999999999997765
No 47
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.55 E-value=1.8e-14 Score=125.64 Aligned_cols=106 Identities=17% Similarity=0.321 Sum_probs=87.1
Q ss_pred CCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceee
Q 042119 128 VVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIF 207 (286)
Q Consensus 128 ~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~ 207 (286)
..++.+|||||||+ |..+..+++ ..++.+|+|+|+|+++++.|++.+...+ +++++++|+.+.+.+ +.||+|+
T Consensus 42 ~~~~~~vLDiG~G~-G~~~~~l~~-~~~~~~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~d~~~~~~~-~~fD~v~ 114 (234)
T 3dtn_A 42 DTENPDILDLGAGT-GLLSAFLME-KYPEATFTLVDMSEKMLEIAKNRFRGNL----KVKYIEADYSKYDFE-EKYDMVV 114 (234)
T ss_dssp SCSSCEEEEETCTT-SHHHHHHHH-HCTTCEEEEEESCHHHHHHHHHHTCSCT----TEEEEESCTTTCCCC-SCEEEEE
T ss_pred CCCCCeEEEecCCC-CHHHHHHHH-hCCCCeEEEEECCHHHHHHHHHhhccCC----CEEEEeCchhccCCC-CCceEEE
Confidence 36779999999997 555666776 3679999999999999999999865433 799999999887766 7899999
Q ss_pred hhhhc-cCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 208 LAALV-GMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 208 ~aalv-g~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
....+ ..+.+.+.++++++.+.|+|||.+++.+
T Consensus 115 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 148 (234)
T 3dtn_A 115 SALSIHHLEDEDKKELYKRSYSILKESGIFINAD 148 (234)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 76544 4455566689999999999999999865
No 48
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.55 E-value=1.9e-14 Score=125.20 Aligned_cols=106 Identities=19% Similarity=0.290 Sum_probs=90.2
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCC-CcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcC------C
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLT-STHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQL------G 201 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~-g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l------~ 201 (286)
.++++||+|||| .|.+++.+|+. .+ +++|+++|+|+++++.|++.++..| +.++++|+++|+.+....+ +
T Consensus 68 ~~~~~vLdiG~G-~G~~~~~la~~-~~~~~~v~~vD~~~~~~~~a~~~~~~~g-~~~~i~~~~~d~~~~~~~~~~~~~~~ 144 (229)
T 2avd_A 68 IQAKKALDLGTF-TGYSALALALA-LPADGRVVTCEVDAQPPELGRPLWRQAE-AEHKIDLRLKPALETLDELLAAGEAG 144 (229)
T ss_dssp TTCCEEEEECCT-TSHHHHHHHTT-SCTTCEEEEEESCSHHHHHHHHHHHHTT-CTTTEEEEESCHHHHHHHHHHTTCTT
T ss_pred cCCCEEEEEcCC-ccHHHHHHHHh-CCCCCEEEEEECCHHHHHHHHHHHHHCC-CCCeEEEEEcCHHHHHHHHHhcCCCC
Confidence 467899999999 58888999983 44 8999999999999999999999999 6789999999997654332 5
Q ss_pred CcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEeec
Q 042119 202 EYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRSA 241 (286)
Q Consensus 202 ~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~~ 241 (286)
.||+||++... .....+++.+.+.|+|||++++.+.
T Consensus 145 ~~D~v~~d~~~----~~~~~~l~~~~~~L~pgG~lv~~~~ 180 (229)
T 2avd_A 145 TFDVAVVDADK----ENCSAYYERCLQLLRPGGILAVLRV 180 (229)
T ss_dssp CEEEEEECSCS----TTHHHHHHHHHHHEEEEEEEEEECC
T ss_pred CccEEEECCCH----HHHHHHHHHHHHHcCCCeEEEEECC
Confidence 79999987543 5667899999999999999999763
No 49
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.54 E-value=3e-14 Score=130.50 Aligned_cols=107 Identities=7% Similarity=0.136 Sum_probs=89.6
Q ss_pred CCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceee
Q 042119 128 VVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIF 207 (286)
Q Consensus 128 ~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~ 207 (286)
..++.+|||||||+ |..+..++++ .+++|+|+|+|+++++.|++.++..| +.++++|+++|+.+++...+.||+|+
T Consensus 115 ~~~~~~vLDiGcG~-G~~~~~la~~--~~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~~~~~~~fD~V~ 190 (312)
T 3vc1_A 115 AGPDDTLVDAGCGR-GGSMVMAHRR--FGSRVEGVTLSAAQADFGNRRARELR-IDDHVRSRVCNMLDTPFDKGAVTASW 190 (312)
T ss_dssp CCTTCEEEEESCTT-SHHHHHHHHH--HCCEEEEEESCHHHHHHHHHHHHHTT-CTTTEEEEECCTTSCCCCTTCEEEEE
T ss_pred CCCCCEEEEecCCC-CHHHHHHHHH--cCCEEEEEeCCHHHHHHHHHHHHHcC-CCCceEEEECChhcCCCCCCCEeEEE
Confidence 57789999999997 5566777773 38999999999999999999999999 77899999999988765556899998
Q ss_pred hhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 208 LAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 208 ~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
....+..- +..++++++.+.|||||++++.+
T Consensus 191 ~~~~l~~~--~~~~~l~~~~~~LkpgG~l~~~~ 221 (312)
T 3vc1_A 191 NNESTMYV--DLHDLFSEHSRFLKVGGRYVTIT 221 (312)
T ss_dssp EESCGGGS--CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ECCchhhC--CHHHHHHHHHHHcCCCcEEEEEE
Confidence 65443221 37789999999999999999875
No 50
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.54 E-value=9.2e-14 Score=122.39 Aligned_cols=107 Identities=18% Similarity=0.373 Sum_probs=87.2
Q ss_pred hcCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcc
Q 042119 125 ENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYD 204 (286)
Q Consensus 125 ~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD 204 (286)
.....++.+|||||||+ |..++.+++ .|.+|+|+|+|+++++.|++.+...| .+++|+++|+.+.+.+ +.||
T Consensus 36 ~~~~~~~~~vLDlGcG~-G~~~~~l~~---~~~~v~gvD~s~~~l~~a~~~~~~~~---~~v~~~~~d~~~~~~~-~~fD 107 (252)
T 1wzn_A 36 EDAKREVRRVLDLACGT-GIPTLELAE---RGYEVVGLDLHEEMLRVARRKAKERN---LKIEFLQGDVLEIAFK-NEFD 107 (252)
T ss_dssp HTCSSCCCEEEEETCTT-CHHHHHHHH---TTCEEEEEESCHHHHHHHHHHHHHTT---CCCEEEESCGGGCCCC-SCEE
T ss_pred HhcccCCCEEEEeCCCC-CHHHHHHHH---CCCeEEEEECCHHHHHHHHHHHHhcC---CceEEEECChhhcccC-CCcc
Confidence 33446778999999997 556677887 48899999999999999999998877 3799999999876543 5799
Q ss_pred eeehh--hhccCChhHHHHHHHHHHhhccCCcEEEEe
Q 042119 205 CIFLA--ALVGMSKEEKLTILGHIRKYMKDGGILLVR 239 (286)
Q Consensus 205 ~V~~a--alvg~~~~~k~~vl~~l~~~l~pgg~lv~r 239 (286)
+|+.. .....+.++..++++++.+.|+|||.+++.
T Consensus 108 ~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~ 144 (252)
T 1wzn_A 108 AVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITD 144 (252)
T ss_dssp EEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEe
Confidence 99853 233345567889999999999999999875
No 51
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.53 E-value=2.4e-14 Score=126.77 Aligned_cols=149 Identities=17% Similarity=0.271 Sum_probs=107.9
Q ss_pred hcCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcc
Q 042119 125 ENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYD 204 (286)
Q Consensus 125 ~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD 204 (286)
...+.++++|||+|||+ |..++.+++...++.+|+++|+|+++++.|++.++..| +.++++++++|+.+. .....||
T Consensus 88 ~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~-~~~~~~D 164 (255)
T 3mb5_A 88 YAGISPGDFIVEAGVGS-GALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAG-FDDRVTIKLKDIYEG-IEEENVD 164 (255)
T ss_dssp HTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHT-CTTTEEEECSCGGGC-CCCCSEE
T ss_pred hhCCCCCCEEEEecCCc-hHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcC-CCCceEEEECchhhc-cCCCCcC
Confidence 34567899999999997 56667777743678999999999999999999999999 677899999999764 2334699
Q ss_pred eeehhhhccCChhHHHHHHHHHHhhccCCcEEEEeecC---------cceeee--cccCCccc--ccCcEEE-EEecCcc
Q 042119 205 CIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRSAK---------GARAFL--YPVVVEHD--LLDFEVL-SAVHPND 270 (286)
Q Consensus 205 ~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~~~---------g~r~~l--yp~v~~~~--l~gf~~~-~~~~P~~ 270 (286)
+|+.+. ++...+++++.+.|+|||.+++-... .++..- |..++..+ .+.|++. ...||..
T Consensus 165 ~v~~~~------~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~g~~f~~~~~~e~~~r~~~~~~~~~rp~~ 238 (255)
T 3mb5_A 165 HVILDL------PQPERVVEHAAKALKPGGFFVAYTPCSNQVMRLHEKLREFKDYFMKPRTINVLVFDQEVKKECMRPRT 238 (255)
T ss_dssp EEEECS------SCGGGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHTGGGBSCCEEECCCCCCEEEETTEEEECS
T ss_pred EEEECC------CCHHHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCccccEEEEEeeeeeEecCCccCCCc
Confidence 999742 34457999999999999999986521 111111 22222212 2567765 5567776
Q ss_pred cce-ee--eEEEeec
Q 042119 271 DVI-NS--VVLVRNS 282 (286)
Q Consensus 271 ~vi-ns--vi~~r~~ 282 (286)
..+ ++ +++|||.
T Consensus 239 ~~~~htg~l~~ark~ 253 (255)
T 3mb5_A 239 TALVHTGYITFARRI 253 (255)
T ss_dssp CCCCCSCEEEEEEBC
T ss_pred ccccccEEEEEEEEe
Confidence 533 44 7778873
No 52
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.53 E-value=5.2e-14 Score=125.48 Aligned_cols=108 Identities=12% Similarity=0.090 Sum_probs=90.8
Q ss_pred CCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceee
Q 042119 128 VVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIF 207 (286)
Q Consensus 128 ~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~ 207 (286)
+.++.+|+|||||+ |+-++.+|+ ..+..+|+++|+|+.+++.|+++++..| +.++|++.++|+.+...+...||+|+
T Consensus 19 v~~g~~VlDIGtGs-G~l~i~la~-~~~~~~V~AvDi~~~al~~A~~N~~~~g-l~~~I~~~~gD~l~~~~~~~~~D~Iv 95 (230)
T 3lec_A 19 VPKGARLLDVGSDH-AYLPIFLLQ-MGYCDFAIAGEVVNGPYQSALKNVSEHG-LTSKIDVRLANGLSAFEEADNIDTIT 95 (230)
T ss_dssp SCTTEEEEEETCST-THHHHHHHH-TTCEEEEEEEESSHHHHHHHHHHHHHTT-CTTTEEEEECSGGGGCCGGGCCCEEE
T ss_pred CCCCCEEEEECCch-HHHHHHHHH-hCCCCEEEEEECCHHHHHHHHHHHHHcC-CCCcEEEEECchhhccccccccCEEE
Confidence 46789999999997 667788888 3567899999999999999999999999 78899999999987665433699998
Q ss_pred hhhhccCChhHHHHHHHHHHhhccCCcEEEEeec
Q 042119 208 LAALVGMSKEEKLTILGHIRKYMKDGGILLVRSA 241 (286)
Q Consensus 208 ~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~~ 241 (286)
++.. -.+--.++++...+.++++|.+++..-
T Consensus 96 iaGm---Gg~lI~~IL~~~~~~l~~~~~lIlqp~ 126 (230)
T 3lec_A 96 ICGM---GGRLIADILNNDIDKLQHVKTLVLQPN 126 (230)
T ss_dssp EEEE---CHHHHHHHHHHTGGGGTTCCEEEEEES
T ss_pred EeCC---chHHHHHHHHHHHHHhCcCCEEEEECC
Confidence 7633 335567899999999999999999864
No 53
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.53 E-value=7.5e-14 Score=127.72 Aligned_cols=111 Identities=13% Similarity=0.075 Sum_probs=91.8
Q ss_pred HHhcCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCC
Q 042119 123 LSENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGE 202 (286)
Q Consensus 123 l~~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~ 202 (286)
+......++.+|||||||+ |..+..+++. .|++|+|+|+|+++++.|++.+...| +.++++|+++|+.+++ +.
T Consensus 83 ~~~~~~~~~~~vLDiGcG~-G~~~~~la~~--~~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~~---~~ 155 (318)
T 2fk8_A 83 LDKLDLKPGMTLLDIGCGW-GTTMRRAVER--FDVNVIGLTLSKNQHARCEQVLASID-TNRSRQVLLQGWEDFA---EP 155 (318)
T ss_dssp HTTSCCCTTCEEEEESCTT-SHHHHHHHHH--HCCEEEEEESCHHHHHHHHHHHHTSC-CSSCEEEEESCGGGCC---CC
T ss_pred HHhcCCCCcCEEEEEcccc-hHHHHHHHHH--CCCEEEEEECCHHHHHHHHHHHHhcC-CCCceEEEECChHHCC---CC
Confidence 3344567889999999997 5666778873 28899999999999999999999999 6788999999997754 68
Q ss_pred cceeehhhhc-cCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 203 YDCIFLAALV-GMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 203 fD~V~~aalv-g~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
||+|+....+ .++.++..++++++.+.|+|||.+++..
T Consensus 156 fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 194 (318)
T 2fk8_A 156 VDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQS 194 (318)
T ss_dssp CSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEE
T ss_pred cCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 9999865433 3344678899999999999999999876
No 54
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.53 E-value=2.9e-14 Score=124.88 Aligned_cols=105 Identities=20% Similarity=0.353 Sum_probs=89.5
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhc---CCCcce
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQ---LGEYDC 205 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~---l~~fD~ 205 (286)
.++.+||+||||+ |..++.+|+ ..++.+|+++|+|+++++.|++.++..| +.++++++++|+.+.... .+.||+
T Consensus 53 ~~~~~vLdiG~G~-G~~~~~la~-~~~~~~v~~vD~~~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~~~~~~~~~~fD~ 129 (233)
T 2gpy_A 53 AAPARILEIGTAI-GYSAIRMAQ-ALPEATIVSIERDERRYEEAHKHVKALG-LESRIELLFGDALQLGEKLELYPLFDV 129 (233)
T ss_dssp HCCSEEEEECCTT-SHHHHHHHH-HCTTCEEEEECCCHHHHHHHHHHHHHTT-CTTTEEEECSCGGGSHHHHTTSCCEEE
T ss_pred cCCCEEEEecCCC-cHHHHHHHH-HCCCCEEEEEECCHHHHHHHHHHHHHcC-CCCcEEEEECCHHHHHHhcccCCCccE
Confidence 4678999999995 777788888 4678999999999999999999999999 677899999999875332 257999
Q ss_pred eehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 206 IFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 206 V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
||++... +...++++.+.+.|+|||++++.+
T Consensus 130 I~~~~~~----~~~~~~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 130 LFIDAAK----GQYRRFFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp EEEEGGG----SCHHHHHHHHGGGEEEEEEEEEET
T ss_pred EEECCCH----HHHHHHHHHHHHHcCCCeEEEEEc
Confidence 9987654 466789999999999999999975
No 55
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.53 E-value=3.6e-14 Score=121.93 Aligned_cols=99 Identities=21% Similarity=0.303 Sum_probs=80.3
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccch---hhcCC-Ccc
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEV---KEQLG-EYD 204 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~---~~~l~-~fD 204 (286)
.++.+|||||||+ |..+..+++ .|++|+|+|+|+.+++.|++. + ++++.++|+.++ +...+ .||
T Consensus 51 ~~~~~vLdiG~G~-G~~~~~l~~---~~~~v~~vD~s~~~~~~a~~~----~----~~~~~~~~~~~~~~~~~~~~~~fD 118 (227)
T 3e8s_A 51 RQPERVLDLGCGE-GWLLRALAD---RGIEAVGVDGDRTLVDAARAA----G----AGEVHLASYAQLAEAKVPVGKDYD 118 (227)
T ss_dssp TCCSEEEEETCTT-CHHHHHHHT---TTCEEEEEESCHHHHHHHHHT----C----SSCEEECCHHHHHTTCSCCCCCEE
T ss_pred CCCCEEEEeCCCC-CHHHHHHHH---CCCEEEEEcCCHHHHHHHHHh----c----ccccchhhHHhhcccccccCCCcc
Confidence 5679999999996 666788887 488999999999999999987 3 467899998876 33334 499
Q ss_pred eeehhhhccCChhHHHHHHHHHHhhccCCcEEEEeec
Q 042119 205 CIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRSA 241 (286)
Q Consensus 205 ~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~~ 241 (286)
+|+....+. .++...+++++.+.|+|||.+++...
T Consensus 119 ~v~~~~~l~--~~~~~~~l~~~~~~L~pgG~l~~~~~ 153 (227)
T 3e8s_A 119 LICANFALL--HQDIIELLSAMRTLLVPGGALVIQTL 153 (227)
T ss_dssp EEEEESCCC--SSCCHHHHHHHHHTEEEEEEEEEEEC
T ss_pred EEEECchhh--hhhHHHHHHHHHHHhCCCeEEEEEec
Confidence 998765443 35667899999999999999999763
No 56
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.53 E-value=6.2e-14 Score=126.22 Aligned_cols=107 Identities=20% Similarity=0.243 Sum_probs=88.8
Q ss_pred CCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchh-hcCCCccee
Q 042119 128 VVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVK-EQLGEYDCI 206 (286)
Q Consensus 128 ~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~-~~l~~fD~V 206 (286)
..++.+|||||||+ |..+..+++ .|.+|+|+|+|+++++.|++.+...| +..+++|+++|+.+++ ...+.||+|
T Consensus 66 ~~~~~~vLDiGcG~-G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~~~~~~~~fD~v 140 (285)
T 4htf_A 66 GPQKLRVLDAGGGE-GQTAIKMAE---RGHQVILCDLSAQMIDRAKQAAEAKG-VSDNMQFIHCAAQDVASHLETPVDLI 140 (285)
T ss_dssp CSSCCEEEEETCTT-CHHHHHHHH---TTCEEEEEESCHHHHHHHHHHHHC-C-CGGGEEEEESCGGGTGGGCSSCEEEE
T ss_pred CCCCCEEEEeCCcc-hHHHHHHHH---CCCEEEEEECCHHHHHHHHHHHHhcC-CCcceEEEEcCHHHhhhhcCCCceEE
Confidence 34578999999996 677788888 48999999999999999999999988 6789999999998877 344679999
Q ss_pred ehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 207 FLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 207 ~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
+....+.+ .++..++++++.+.|||||.+++..
T Consensus 141 ~~~~~l~~-~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (285)
T 4htf_A 141 LFHAVLEW-VADPRSVLQTLWSVLRPGGVLSLMF 173 (285)
T ss_dssp EEESCGGG-CSCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EECchhhc-ccCHHHHHHHHHHHcCCCeEEEEEE
Confidence 97654422 2456789999999999999999865
No 57
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.53 E-value=7.7e-14 Score=124.69 Aligned_cols=109 Identities=22% Similarity=0.315 Sum_probs=90.6
Q ss_pred CCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceee
Q 042119 128 VVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIF 207 (286)
Q Consensus 128 ~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~ 207 (286)
..++.+|||||||+ |..+..+++ ..++.+|+++|+|+.+++.|++.+...|. .+++|+++|+.+++.+.+.||+|+
T Consensus 35 ~~~~~~vLDiG~G~-G~~~~~l~~-~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~~d~~~~~~~~~~fD~v~ 110 (276)
T 3mgg_A 35 YPPGAKVLEAGCGI-GAQTVILAK-NNPDAEITSIDISPESLEKARENTEKNGI--KNVKFLQANIFSLPFEDSSFDHIF 110 (276)
T ss_dssp CCTTCEEEETTCTT-SHHHHHHHH-HCTTSEEEEEESCHHHHHHHHHHHHHTTC--CSEEEEECCGGGCCSCTTCEEEEE
T ss_pred CCCCCeEEEecCCC-CHHHHHHHH-hCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEcccccCCCCCCCeeEEE
Confidence 47889999999997 556677777 37799999999999999999999999883 579999999988776667899999
Q ss_pred hhhhccCChhHHHHHHHHHHhhccCCcEEEEeec
Q 042119 208 LAALVGMSKEEKLTILGHIRKYMKDGGILLVRSA 241 (286)
Q Consensus 208 ~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~~ 241 (286)
....... ..+...+++++.+.|+|||.+++...
T Consensus 111 ~~~~l~~-~~~~~~~l~~~~~~L~pgG~l~~~~~ 143 (276)
T 3mgg_A 111 VCFVLEH-LQSPEEALKSLKKVLKPGGTITVIEG 143 (276)
T ss_dssp EESCGGG-CSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred Eechhhh-cCCHHHHHHHHHHHcCCCcEEEEEEc
Confidence 7654322 24556899999999999999999763
No 58
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.52 E-value=7.2e-14 Score=125.26 Aligned_cols=110 Identities=19% Similarity=0.261 Sum_probs=80.5
Q ss_pred CCCCCCEEEEeccCCChhhHHHHHhhcCCCc-EEEEEeCChHHHHHHHHHHHhcCC-C----------------------
Q 042119 127 GVVQPKKVAFVGSGPMPLTSIIMAKHHLTST-HFDNFDIDEAANDVARSIVASDAE-F---------------------- 182 (286)
Q Consensus 127 ~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~-~V~~iDid~~ai~~Ar~~~~~~g~-l---------------------- 182 (286)
+..++.+|||||||+ |..++.+++ .|+ +|+|+|+|+.|++.|++.++..+. +
T Consensus 52 ~~~~g~~vLDiGCG~-G~~~~~~~~---~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~ 127 (263)
T 2a14_A 52 GGLQGDTLIDIGSGP-TIYQVLAAC---DSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEK 127 (263)
T ss_dssp TSCCEEEEEESSCTT-CCGGGTTGG---GTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHH
T ss_pred CCCCCceEEEeCCCc-cHHHHHHHH---hhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhH
Confidence 557789999999998 444455555 555 699999999999999998765320 0
Q ss_pred ----CCCeE-EEEccccch-hh---cCCCcceeehhhhc---cCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 183 ----EGRMK-FLTRDIMEV-KE---QLGEYDCIFLAALV---GMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 183 ----~~~i~-f~~~D~~~~-~~---~l~~fD~V~~aalv---g~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
..+++ ++++|+.+. +. ..+.||+|+..... ..+.++..+++.++++.|||||.+++..
T Consensus 128 ~~~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~ 197 (263)
T 2a14_A 128 EEKLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTV 197 (263)
T ss_dssp HHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred HHHHHhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 01244 899999773 21 23579999864322 2234677889999999999999999986
No 59
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.52 E-value=7.4e-14 Score=131.14 Aligned_cols=107 Identities=12% Similarity=0.193 Sum_probs=90.2
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchh--hcCCCccee
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVK--EQLGEYDCI 206 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~--~~l~~fD~V 206 (286)
..+.+|||||||+ |..++.+++ .+|+.+++++|+ |++++.|++.+...| +.++++|+.+|..+.. .+ ++||+|
T Consensus 178 ~~~~~vlDvG~G~-G~~~~~l~~-~~p~~~~~~~D~-~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~~~~~p-~~~D~v 252 (363)
T 3dp7_A 178 HHPKRLLDIGGNT-GKWATQCVQ-YNKEVEVTIVDL-PQQLEMMRKQTAGLS-GSERIHGHGANLLDRDVPFP-TGFDAV 252 (363)
T ss_dssp GCCSEEEEESCTT-CHHHHHHHH-HSTTCEEEEEEC-HHHHHHHHHHHTTCT-TGGGEEEEECCCCSSSCCCC-CCCSEE
T ss_pred cCCCEEEEeCCCc-CHHHHHHHH-hCCCCEEEEEeC-HHHHHHHHHHHHhcC-cccceEEEEccccccCCCCC-CCcCEE
Confidence 5678999999996 666777877 489999999999 999999999999888 6789999999997631 22 589999
Q ss_pred ehhhhc-cCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 207 FLAALV-GMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 207 ~~aalv-g~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
++...+ .++.++..++++++++.|+|||.|++.+
T Consensus 253 ~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e 287 (363)
T 3dp7_A 253 WMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIME 287 (363)
T ss_dssp EEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred EEechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 976544 4566777899999999999999998865
No 60
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.52 E-value=1.2e-13 Score=122.77 Aligned_cols=109 Identities=15% Similarity=0.077 Sum_probs=88.9
Q ss_pred CCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceee
Q 042119 128 VVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIF 207 (286)
Q Consensus 128 ~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~ 207 (286)
+.++.+|+|||||+ |.-++.+|+ ..+..+|+++|+|+.+++.|+++++..| +.++|++..+|+.+...+-..||+|+
T Consensus 13 v~~g~~VlDIGtGs-G~l~i~la~-~~~~~~V~avDi~~~al~~A~~N~~~~g-l~~~i~~~~~d~l~~l~~~~~~D~Iv 89 (225)
T 3kr9_A 13 VSQGAILLDVGSDH-AYLPIELVE-RGQIKSAIAGEVVEGPYQSAVKNVEAHG-LKEKIQVRLANGLAAFEETDQVSVIT 89 (225)
T ss_dssp SCTTEEEEEETCST-THHHHHHHH-TTSEEEEEEEESSHHHHHHHHHHHHHTT-CTTTEEEEECSGGGGCCGGGCCCEEE
T ss_pred CCCCCEEEEeCCCc-HHHHHHHHH-hCCCCEEEEEECCHHHHHHHHHHHHHcC-CCceEEEEECchhhhcccCcCCCEEE
Confidence 46778999999997 666788888 4677899999999999999999999999 78899999999965332212699998
Q ss_pred hhhhccCChhHHHHHHHHHHhhccCCcEEEEeecC
Q 042119 208 LAALVGMSKEEKLTILGHIRKYMKDGGILLVRSAK 242 (286)
Q Consensus 208 ~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~~~ 242 (286)
++. |..+--.++++...++|+|+|.+++....
T Consensus 90 iaG---~Gg~~i~~Il~~~~~~L~~~~~lVlq~~~ 121 (225)
T 3kr9_A 90 IAG---MGGRLIARILEEGLGKLANVERLILQPNN 121 (225)
T ss_dssp EEE---ECHHHHHHHHHHTGGGCTTCCEEEEEESS
T ss_pred EcC---CChHHHHHHHHHHHHHhCCCCEEEEECCC
Confidence 763 32344568999999999999999997643
No 61
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.51 E-value=1.4e-13 Score=117.43 Aligned_cols=99 Identities=18% Similarity=0.189 Sum_probs=83.4
Q ss_pred CCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeehhh
Q 042119 131 PKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFLAA 210 (286)
Q Consensus 131 ~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~aa 210 (286)
+.+|||||||+ |..+..+++ .|.+|+|+|+|+++++.|++. . .+++|+++|+.+++...+.||+|+...
T Consensus 42 ~~~vLDiGcG~-G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~----~---~~~~~~~~d~~~~~~~~~~fD~v~~~~ 110 (203)
T 3h2b_A 42 DGVILDVGSGT-GRWTGHLAS---LGHQIEGLEPATRLVELARQT----H---PSVTFHHGTITDLSDSPKRWAGLLAWY 110 (203)
T ss_dssp CSCEEEETCTT-CHHHHHHHH---TTCCEEEECCCHHHHHHHHHH----C---TTSEEECCCGGGGGGSCCCEEEEEEES
T ss_pred CCeEEEecCCC-CHHHHHHHh---cCCeEEEEeCCHHHHHHHHHh----C---CCCeEEeCcccccccCCCCeEEEEehh
Confidence 78999999997 566677887 478999999999999999986 2 479999999998776667899999755
Q ss_pred hc-cCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 211 LV-GMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 211 lv-g~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
.+ .++.++...+++++.+.|+|||.+++..
T Consensus 111 ~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~ 141 (203)
T 3h2b_A 111 SLIHMGPGELPDALVALRMAVEDGGGLLMSF 141 (203)
T ss_dssp SSTTCCTTTHHHHHHHHHHTEEEEEEEEEEE
T ss_pred hHhcCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 43 4444678899999999999999999976
No 62
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.51 E-value=1.7e-13 Score=116.69 Aligned_cols=103 Identities=10% Similarity=0.216 Sum_probs=87.1
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeeh
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFL 208 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~ 208 (286)
.++ +||+||||+ |..+..+++ .|.+|+++|+|+++++.|++.+...| . +++|+++|+.+.+...+.||+|+.
T Consensus 29 ~~~-~vLdiGcG~-G~~~~~l~~---~~~~v~~vD~s~~~~~~a~~~~~~~~-~--~~~~~~~d~~~~~~~~~~fD~v~~ 100 (202)
T 2kw5_A 29 PQG-KILCLAEGE-GRNACFLAS---LGYEVTAVDQSSVGLAKAKQLAQEKG-V--KITTVQSNLADFDIVADAWEGIVS 100 (202)
T ss_dssp CSS-EEEECCCSC-THHHHHHHT---TTCEEEEECSSHHHHHHHHHHHHHHT-C--CEEEECCBTTTBSCCTTTCSEEEE
T ss_pred CCC-CEEEECCCC-CHhHHHHHh---CCCeEEEEECCHHHHHHHHHHHHhcC-C--ceEEEEcChhhcCCCcCCccEEEE
Confidence 345 999999997 666788887 47899999999999999999998888 3 799999999877654467999986
Q ss_pred hhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 209 AALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 209 aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
. +..++.++..++++++.+.|+|||.+++..
T Consensus 101 ~-~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 131 (202)
T 2kw5_A 101 I-FCHLPSSLRQQLYPKVYQGLKPGGVFILEG 131 (202)
T ss_dssp E-CCCCCHHHHHHHHHHHHTTCCSSEEEEEEE
T ss_pred E-hhcCCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 3 444566788899999999999999999986
No 63
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.51 E-value=7.9e-14 Score=120.04 Aligned_cols=105 Identities=15% Similarity=0.155 Sum_probs=84.6
Q ss_pred CCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCccee
Q 042119 127 GVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCI 206 (286)
Q Consensus 127 ~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V 206 (286)
...++.+|||||||+ |..+..+++ .+.+|+|+|+|+++++.|++.+... .+++|+++|+.+.+ ..+.||+|
T Consensus 48 ~~~~~~~vLDiGcG~-G~~~~~l~~---~~~~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~d~~~~~-~~~~fD~v 118 (216)
T 3ofk_A 48 SSGAVSNGLEIGCAA-GAFTEKLAP---HCKRLTVIDVMPRAIGRACQRTKRW----SHISWAATDILQFS-TAELFDLI 118 (216)
T ss_dssp TTSSEEEEEEECCTT-SHHHHHHGG---GEEEEEEEESCHHHHHHHHHHTTTC----SSEEEEECCTTTCC-CSCCEEEE
T ss_pred ccCCCCcEEEEcCCC-CHHHHHHHH---cCCEEEEEECCHHHHHHHHHhcccC----CCeEEEEcchhhCC-CCCCccEE
Confidence 346778999999997 566677777 4689999999999999999986653 37999999998876 34689999
Q ss_pred ehhhhc-cCC-hhHHHHHHHHHHhhccCCcEEEEee
Q 042119 207 FLAALV-GMS-KEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 207 ~~aalv-g~~-~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
+....+ .++ .+...++++++.+.|+|||.+++.+
T Consensus 119 ~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 154 (216)
T 3ofk_A 119 VVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGS 154 (216)
T ss_dssp EEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 976443 332 3455689999999999999999965
No 64
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.51 E-value=4.1e-14 Score=124.34 Aligned_cols=107 Identities=15% Similarity=0.130 Sum_probs=84.9
Q ss_pred CCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccch--hhcCCCcce
Q 042119 128 VVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEV--KEQLGEYDC 205 (286)
Q Consensus 128 ~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~--~~~l~~fD~ 205 (286)
+.++.+|||||||+ |..+..+++ ....+|+++|+|+++++.|++..+..| .+++|+++|+.++ +...+.||+
T Consensus 58 ~~~~~~vLDiGcGt-G~~~~~l~~--~~~~~v~gvD~s~~~l~~a~~~~~~~~---~~v~~~~~d~~~~~~~~~~~~fD~ 131 (236)
T 1zx0_A 58 SSKGGRVLEVGFGM-AIAASKVQE--APIDEHWIIECNDGVFQRLRDWAPRQT---HKVIPLKGLWEDVAPTLPDGHFDG 131 (236)
T ss_dssp TTTCEEEEEECCTT-SHHHHHHHT--SCEEEEEEEECCHHHHHHHHHHGGGCS---SEEEEEESCHHHHGGGSCTTCEEE
T ss_pred CCCCCeEEEEeccC-CHHHHHHHh--cCCCeEEEEcCCHHHHHHHHHHHHhcC---CCeEEEecCHHHhhcccCCCceEE
Confidence 46788999999996 566677776 344599999999999999999887766 5799999999887 444467999
Q ss_pred eehhhh---c-cCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 206 IFLAAL---V-GMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 206 V~~aal---v-g~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
|+.+.. . ....+.+..++++++++|||||++++-+
T Consensus 132 V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~ 170 (236)
T 1zx0_A 132 ILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp EEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred EEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEe
Confidence 986111 1 2234566788999999999999999865
No 65
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.51 E-value=6.9e-14 Score=120.55 Aligned_cols=101 Identities=11% Similarity=0.145 Sum_probs=83.8
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeeh
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFL 208 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~ 208 (286)
.++.+|||||||+ |..+..+++ .+.+|+|+|+|+++++.|++.+. .+++|+++|+.+++.. +.||+|+.
T Consensus 44 ~~~~~vLDiGcG~-G~~~~~l~~---~~~~v~~vD~s~~~~~~a~~~~~------~~~~~~~~d~~~~~~~-~~fD~v~~ 112 (220)
T 3hnr_A 44 KSFGNVLEFGVGT-GNLTNKLLL---AGRTVYGIEPSREMRMIAKEKLP------KEFSITEGDFLSFEVP-TSIDTIVS 112 (220)
T ss_dssp TCCSEEEEECCTT-SHHHHHHHH---TTCEEEEECSCHHHHHHHHHHSC------TTCCEESCCSSSCCCC-SCCSEEEE
T ss_pred cCCCeEEEeCCCC-CHHHHHHHh---CCCeEEEEeCCHHHHHHHHHhCC------CceEEEeCChhhcCCC-CCeEEEEE
Confidence 5788999999996 666777887 48999999999999999998733 4789999999887766 78999987
Q ss_pred hhhc-cCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 209 AALV-GMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 209 aalv-g~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
...+ ..+...+..+++++.+.|||||.+++.+
T Consensus 113 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 145 (220)
T 3hnr_A 113 TYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFAD 145 (220)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred CcchhcCChHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 6544 4444555569999999999999999975
No 66
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.51 E-value=3e-13 Score=124.84 Aligned_cols=145 Identities=16% Similarity=0.116 Sum_probs=106.3
Q ss_pred CCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceee
Q 042119 128 VVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIF 207 (286)
Q Consensus 128 ~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~ 207 (286)
..++.+|+|||||+ |..+..+++ .+|+.+++++|+ |++++.|++.+...| +.++|+|+.+|..+ +.+. +||+|+
T Consensus 167 ~~~~~~vlDvG~G~-G~~~~~l~~-~~p~~~~~~~D~-~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~-~~p~-~~D~v~ 240 (332)
T 3i53_A 167 WAALGHVVDVGGGS-GGLLSALLT-AHEDLSGTVLDL-QGPASAAHRRFLDTG-LSGRAQVVVGSFFD-PLPA-GAGGYV 240 (332)
T ss_dssp CGGGSEEEEETCTT-SHHHHHHHH-HCTTCEEEEEEC-HHHHHHHHHHHHHTT-CTTTEEEEECCTTS-CCCC-SCSEEE
T ss_pred CCCCCEEEEeCCCh-hHHHHHHHH-HCCCCeEEEecC-HHHHHHHHHhhhhcC-cCcCeEEecCCCCC-CCCC-CCcEEE
Confidence 35678999999997 566677777 478999999999 999999999999988 78899999999863 2222 799999
Q ss_pred hhhhc-cCChhHHHHHHHHHHhhccCCcEEEEeec---Ccceeee----------cccCCccc---c---cCcEEEEEec
Q 042119 208 LAALV-GMSKEEKLTILGHIRKYMKDGGILLVRSA---KGARAFL----------YPVVVEHD---L---LDFEVLSAVH 267 (286)
Q Consensus 208 ~aalv-g~~~~~k~~vl~~l~~~l~pgg~lv~r~~---~g~r~~l----------yp~v~~~~---l---~gf~~~~~~~ 267 (286)
....+ .++.+...++++++++.|+|||.+++.+. ....... ......++ + .||+...+.
T Consensus 241 ~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~- 319 (332)
T 3i53_A 241 LSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERSLAELGELAAQAGLAVRAAH- 319 (332)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC---CCHHHHHHHHHHHSCCCCCHHHHHHHHHHTTEEEEEEE-
T ss_pred EehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCCHHHHHHHHHHCCCEEEEEE-
Confidence 76544 56666678999999999999999998753 1100000 00111111 1 599987665
Q ss_pred CcccceeeeEEEee
Q 042119 268 PNDDVINSVVLVRN 281 (286)
Q Consensus 268 P~~~vinsvi~~r~ 281 (286)
|.+. -++|.+|+
T Consensus 320 ~~~~--~~vie~r~ 331 (332)
T 3i53_A 320 PISY--VSIVEMTA 331 (332)
T ss_dssp ECSS--SEEEEEEE
T ss_pred ECCC--cEEEEEee
Confidence 4444 78888886
No 67
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.51 E-value=4.9e-14 Score=124.36 Aligned_cols=111 Identities=23% Similarity=0.334 Sum_probs=90.5
Q ss_pred HHhcCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCC
Q 042119 123 LSENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGE 202 (286)
Q Consensus 123 l~~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~ 202 (286)
+......++.+|||||||+ |..+..++++ + +++|+|+|+|+++++.|++..... .+++|+++|+.+.+.+.+.
T Consensus 48 ~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~-~-~~~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~d~~~~~~~~~~ 120 (266)
T 3ujc_A 48 LSDIELNENSKVLDIGSGL-GGGCMYINEK-Y-GAHTHGIDICSNIVNMANERVSGN----NKIIFEANDILTKEFPENN 120 (266)
T ss_dssp TTTCCCCTTCEEEEETCTT-SHHHHHHHHH-H-CCEEEEEESCHHHHHHHHHTCCSC----TTEEEEECCTTTCCCCTTC
T ss_pred HHhcCCCCCCEEEEECCCC-CHHHHHHHHH-c-CCEEEEEeCCHHHHHHHHHHhhcC----CCeEEEECccccCCCCCCc
Confidence 3344567889999999996 6667778773 2 899999999999999999975432 5899999999887665568
Q ss_pred cceeehhhhc-cCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 203 YDCIFLAALV-GMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 203 fD~V~~aalv-g~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
||+|+....+ .++.++...+++++.+.|+|||.+++.+
T Consensus 121 fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 159 (266)
T 3ujc_A 121 FDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITD 159 (266)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 9999976443 4455788899999999999999999976
No 68
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.51 E-value=5.4e-14 Score=123.95 Aligned_cols=105 Identities=23% Similarity=0.289 Sum_probs=88.5
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCC-CcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcC-------
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLT-STHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQL------- 200 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~-g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l------- 200 (286)
.++++||+||||+ |..++.+|+. .+ +++|+++|+|+++++.|++.++..| +.++++|+++|+.+....+
T Consensus 59 ~~~~~VLdiG~G~-G~~~~~la~~-~~~~~~v~~vD~~~~~~~~a~~~~~~~g-~~~~v~~~~~d~~~~~~~~~~~~~~~ 135 (239)
T 2hnk_A 59 SGAKRIIEIGTFT-GYSSLCFASA-LPEDGKILCCDVSEEWTNVARKYWKENG-LENKIFLKLGSALETLQVLIDSKSAP 135 (239)
T ss_dssp HTCSEEEEECCTT-CHHHHHHHHH-SCTTCEEEEEESCHHHHHHHHHHHHHTT-CGGGEEEEESCHHHHHHHHHHCSSCC
T ss_pred hCcCEEEEEeCCC-CHHHHHHHHh-CCCCCEEEEEECCHHHHHHHHHHHHHcC-CCCCEEEEECCHHHHHHHHHhhcccc
Confidence 4678999999995 7788888884 44 7999999999999999999999999 6778999999997643321
Q ss_pred ----------CCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 201 ----------GEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 201 ----------~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
+.||+||+++.. +....+++.+.+.|+|||++++.+
T Consensus 136 ~~~~~f~~~~~~fD~I~~~~~~----~~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 136 SWASDFAFGPSSIDLFFLDADK----ENYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp GGGTTTCCSTTCEEEEEECSCG----GGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred cccccccCCCCCcCEEEEeCCH----HHHHHHHHHHHHHcCCCeEEEEEc
Confidence 579999977533 566789999999999999999976
No 69
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.50 E-value=9.5e-14 Score=122.20 Aligned_cols=108 Identities=13% Similarity=0.140 Sum_probs=89.4
Q ss_pred cCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcce
Q 042119 126 NGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDC 205 (286)
Q Consensus 126 ~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~ 205 (286)
..+.++.+|||||||+ |..+..+++ .+.+|+++|+|+++++.|++.+...|. .+++|+++|+.+++...+.||+
T Consensus 17 ~~~~~~~~vLDiGcG~-G~~~~~l~~---~~~~v~~vD~s~~~~~~a~~~~~~~~~--~~v~~~~~d~~~~~~~~~~fD~ 90 (239)
T 1xxl_A 17 AECRAEHRVLDIGAGA-GHTALAFSP---YVQECIGVDATKEMVEVASSFAQEKGV--ENVRFQQGTAESLPFPDDSFDI 90 (239)
T ss_dssp HTCCTTCEEEEESCTT-SHHHHHHGG---GSSEEEEEESCHHHHHHHHHHHHHHTC--CSEEEEECBTTBCCSCTTCEEE
T ss_pred hCcCCCCEEEEEccCc-CHHHHHHHH---hCCEEEEEECCHHHHHHHHHHHHHcCC--CCeEEEecccccCCCCCCcEEE
Confidence 3568899999999996 666777887 456999999999999999999998883 5899999999887665568999
Q ss_pred eehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 206 IFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 206 V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
|+......+ ..+...++.++.+.|+|||.+++.+
T Consensus 91 v~~~~~l~~-~~~~~~~l~~~~~~LkpgG~l~~~~ 124 (239)
T 1xxl_A 91 ITCRYAAHH-FSDVRKAVREVARVLKQDGRFLLVD 124 (239)
T ss_dssp EEEESCGGG-CSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEECCchhh-ccCHHHHHHHHHHHcCCCcEEEEEE
Confidence 996643321 2466789999999999999999865
No 70
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.50 E-value=1.6e-13 Score=119.46 Aligned_cols=108 Identities=18% Similarity=0.155 Sum_probs=85.4
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhh--cCCCccee
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKE--QLGEYDCI 206 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~--~l~~fD~V 206 (286)
.++.+|||||||+ |..++.+|+ ..++.+|+|||+|+++++.|++.++..| + .+++|+++|+.+++. +.+.||.|
T Consensus 37 ~~~~~vLDiGcG~-G~~~~~la~-~~p~~~v~giD~s~~~l~~a~~~~~~~~-~-~nv~~~~~d~~~l~~~~~~~~~d~v 112 (213)
T 2fca_A 37 NDNPIHIEVGTGK-GQFISGMAK-QNPDINYIGIELFKSVIVTAVQKVKDSE-A-QNVKLLNIDADTLTDVFEPGEVKRV 112 (213)
T ss_dssp SCCCEEEEECCTT-SHHHHHHHH-HCTTSEEEEECSCHHHHHHHHHHHHHSC-C-SSEEEECCCGGGHHHHCCTTSCCEE
T ss_pred CCCceEEEEecCC-CHHHHHHHH-HCCCCCEEEEEechHHHHHHHHHHHHcC-C-CCEEEEeCCHHHHHhhcCcCCcCEE
Confidence 4678999999996 666778887 4789999999999999999999999998 4 679999999988653 33579998
Q ss_pred ehhhhccCChh-------HHHHHHHHHHhhccCCcEEEEee
Q 042119 207 FLAALVGMSKE-------EKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 207 ~~aalvg~~~~-------~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
++...-.+... ....+++++.+.|+|||.+++.+
T Consensus 113 ~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~t 153 (213)
T 2fca_A 113 YLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKT 153 (213)
T ss_dssp EEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEE
T ss_pred EEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEe
Confidence 75421111111 02578999999999999999875
No 71
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.50 E-value=3e-13 Score=116.73 Aligned_cols=105 Identities=16% Similarity=0.197 Sum_probs=85.7
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeeh
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFL 208 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~ 208 (286)
.++.+|||||||++ ..+..+++ .+.+|+++|+|+++++.|++.+...+ .+++++++|+.+.+...+.||+|+.
T Consensus 37 ~~~~~vLDlG~G~G-~~~~~l~~---~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~~d~~~~~~~~~~~D~v~~ 109 (227)
T 1ve3_A 37 KKRGKVLDLACGVG-GFSFLLED---YGFEVVGVDISEDMIRKAREYAKSRE---SNVEFIVGDARKLSFEDKTFDYVIF 109 (227)
T ss_dssp CSCCEEEEETCTTS-HHHHHHHH---TTCEEEEEESCHHHHHHHHHHHHHTT---CCCEEEECCTTSCCSCTTCEEEEEE
T ss_pred CCCCeEEEEeccCC-HHHHHHHH---cCCEEEEEECCHHHHHHHHHHHHhcC---CCceEEECchhcCCCCCCcEEEEEE
Confidence 45889999999974 55577777 34599999999999999999988776 5899999999876544457999986
Q ss_pred hhhc-cCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 209 AALV-GMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 209 aalv-g~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
.... ..+.++..++++++.+.|+|||.+++..
T Consensus 110 ~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 142 (227)
T 1ve3_A 110 IDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYF 142 (227)
T ss_dssp ESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEe
Confidence 5431 3455677889999999999999998865
No 72
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.50 E-value=1.4e-13 Score=126.59 Aligned_cols=107 Identities=19% Similarity=0.268 Sum_probs=88.6
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeeh
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFL 208 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~ 208 (286)
.++.+|||||||+ |..+..+++ .+++.+++++|++ .+++.|++.+...| +.++++|+++|..+.+.+ ++||+|+.
T Consensus 164 ~~~~~vlDvG~G~-G~~~~~l~~-~~p~~~~~~~D~~-~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~~~~-~~~D~v~~ 238 (335)
T 2r3s_A 164 IEPLKVLDISASH-GLFGIAVAQ-HNPNAEIFGVDWA-SVLEVAKENARIQG-VASRYHTIAGSAFEVDYG-NDYDLVLL 238 (335)
T ss_dssp CCCSEEEEETCTT-CHHHHHHHH-HCTTCEEEEEECH-HHHHHHHHHHHHHT-CGGGEEEEESCTTTSCCC-SCEEEEEE
T ss_pred CCCCEEEEECCCc-CHHHHHHHH-HCCCCeEEEEecH-HHHHHHHHHHHhcC-CCcceEEEecccccCCCC-CCCcEEEE
Confidence 6789999999997 556667777 3689999999999 99999999999988 677899999999764332 35999997
Q ss_pred hhhc-cCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 209 AALV-GMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 209 aalv-g~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
.... .++.++..++++++.+.|+|||.+++.+
T Consensus 239 ~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e 271 (335)
T 2r3s_A 239 PNFLHHFDVATCEQLLRKIKTALAVEGKVIVFD 271 (335)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cchhccCCHHHHHHHHHHHHHhCCCCcEEEEEe
Confidence 5433 5566777899999999999999888865
No 73
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.50 E-value=2.8e-13 Score=120.32 Aligned_cols=99 Identities=10% Similarity=0.113 Sum_probs=80.7
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeeh
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFL 208 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~ 208 (286)
.++.+|||||||+ |..+..+++ .+.+|+|+|+|+++++.|++.. .+++|+++|+.+++. .+.||+|+.
T Consensus 49 ~~~~~vLDiGcG~-G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~-------~~~~~~~~d~~~~~~-~~~fD~v~~ 116 (263)
T 3pfg_A 49 PKAASLLDVACGT-GMHLRHLAD---SFGTVEGLELSADMLAIARRRN-------PDAVLHHGDMRDFSL-GRRFSAVTC 116 (263)
T ss_dssp TTCCEEEEETCTT-SHHHHHHTT---TSSEEEEEESCHHHHHHHHHHC-------TTSEEEECCTTTCCC-SCCEEEEEE
T ss_pred CCCCcEEEeCCcC-CHHHHHHHH---cCCeEEEEECCHHHHHHHHhhC-------CCCEEEECChHHCCc-cCCcCEEEE
Confidence 4678999999996 666677777 4789999999999999999872 268999999988665 457999987
Q ss_pred hh-hc-cC-ChhHHHHHHHHHHhhccCCcEEEEe
Q 042119 209 AA-LV-GM-SKEEKLTILGHIRKYMKDGGILLVR 239 (286)
Q Consensus 209 aa-lv-g~-~~~~k~~vl~~l~~~l~pgg~lv~r 239 (286)
.. .+ .+ +.++...+++++.+.|+|||.+++.
T Consensus 117 ~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 117 MFSSIGHLAGQAELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp CTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred cCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 64 33 23 2356778999999999999999995
No 74
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.49 E-value=3.3e-14 Score=129.56 Aligned_cols=108 Identities=20% Similarity=0.273 Sum_probs=82.9
Q ss_pred CCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCC--------------------------
Q 042119 130 QPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFE-------------------------- 183 (286)
Q Consensus 130 ~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~-------------------------- 183 (286)
++++|||||||+ |..++.+|+ .+++.+|+|+|+|+.+++.|++.++..+ ..
T Consensus 46 ~~~~VLDiGCG~-G~~~~~la~-~~~~~~v~gvDis~~~i~~A~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (292)
T 3g07_A 46 RGRDVLDLGCNV-GHLTLSIAC-KWGPSRMVGLDIDSRLIHSARQNIRHYL-SEELRLPPQTLEGDPGAEGEEGTTTVRK 122 (292)
T ss_dssp TTSEEEEESCTT-CHHHHHHHH-HTCCSEEEEEESCHHHHHHHHHTC---------------------------------
T ss_pred CCCcEEEeCCCC-CHHHHHHHH-HcCCCEEEEECCCHHHHHHHHHHHHhhh-hhhccccccccccccccccccccccccc
Confidence 689999999997 666777887 4678999999999999999999877654 22
Q ss_pred -------------------------------CCeEEEEccccchh-----hcCCCcceeehhhhc-c----CChhHHHHH
Q 042119 184 -------------------------------GRMKFLTRDIMEVK-----EQLGEYDCIFLAALV-G----MSKEEKLTI 222 (286)
Q Consensus 184 -------------------------------~~i~f~~~D~~~~~-----~~l~~fD~V~~aalv-g----~~~~~k~~v 222 (286)
.+|+|.++|..+.. ...+.||+|+..... . ++.+...++
T Consensus 123 ~~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~ 202 (292)
T 3g07_A 123 RSCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRM 202 (292)
T ss_dssp -------------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHH
T ss_pred cccccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHH
Confidence 58999999987533 234579999865432 1 134577889
Q ss_pred HHHHHhhccCCcEEEEee
Q 042119 223 LGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 223 l~~l~~~l~pgg~lv~r~ 240 (286)
++++.+.|+|||+|++..
T Consensus 203 l~~~~~~LkpGG~lil~~ 220 (292)
T 3g07_A 203 FRRIYRHLRPGGILVLEP 220 (292)
T ss_dssp HHHHHHHEEEEEEEEEEC
T ss_pred HHHHHHHhCCCcEEEEec
Confidence 999999999999999964
No 75
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.49 E-value=3.2e-13 Score=112.94 Aligned_cols=112 Identities=18% Similarity=0.225 Sum_probs=90.2
Q ss_pred hcCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCC-CeEEEEccccchhhcCCCc
Q 042119 125 ENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEG-RMKFLTRDIMEVKEQLGEY 203 (286)
Q Consensus 125 ~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~-~i~f~~~D~~~~~~~l~~f 203 (286)
.....++.+||+||||+ |..+..+++ .+.+|+++|+|+++++.|++.+...| +.+ +++++++|+.+... .+.|
T Consensus 47 ~~~~~~~~~vLdiG~G~-G~~~~~~~~---~~~~v~~~D~~~~~~~~a~~~~~~~~-~~~~~~~~~~~d~~~~~~-~~~~ 120 (194)
T 1dus_A 47 NVVVDKDDDILDLGCGY-GVIGIALAD---EVKSTTMADINRRAIKLAKENIKLNN-LDNYDIRVVHSDLYENVK-DRKY 120 (194)
T ss_dssp HCCCCTTCEEEEETCTT-SHHHHHHGG---GSSEEEEEESCHHHHHHHHHHHHHTT-CTTSCEEEEECSTTTTCT-TSCE
T ss_pred HcccCCCCeEEEeCCCC-CHHHHHHHH---cCCeEEEEECCHHHHHHHHHHHHHcC-CCccceEEEECchhcccc-cCCc
Confidence 34556889999999996 666677887 28999999999999999999999888 444 59999999976332 3579
Q ss_pred ceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEeecC
Q 042119 204 DCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRSAK 242 (286)
Q Consensus 204 D~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~~~ 242 (286)
|+|+......+..+....+++++.+.|+|||.+++....
T Consensus 121 D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 159 (194)
T 1dus_A 121 NKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQT 159 (194)
T ss_dssp EEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEES
T ss_pred eEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEECC
Confidence 999976543333567778999999999999999997643
No 76
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.49 E-value=5.1e-13 Score=111.85 Aligned_cols=138 Identities=16% Similarity=0.165 Sum_probs=100.5
Q ss_pred CCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceee
Q 042119 128 VVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIF 207 (286)
Q Consensus 128 ~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~ 207 (286)
+.++.+||+||||+ |..+..+++ .+.+|+++|+|+++++.|++.. .+++++++|+.+.+...+.||+|+
T Consensus 44 ~~~~~~vLdiG~G~-G~~~~~l~~---~~~~v~~~D~~~~~~~~a~~~~-------~~~~~~~~d~~~~~~~~~~~D~i~ 112 (195)
T 3cgg_A 44 APRGAKILDAGCGQ-GRIGGYLSK---QGHDVLGTDLDPILIDYAKQDF-------PEARWVVGDLSVDQISETDFDLIV 112 (195)
T ss_dssp SCTTCEEEEETCTT-THHHHHHHH---TTCEEEEEESCHHHHHHHHHHC-------TTSEEEECCTTTSCCCCCCEEEEE
T ss_pred ccCCCeEEEECCCC-CHHHHHHHH---CCCcEEEEcCCHHHHHHHHHhC-------CCCcEEEcccccCCCCCCceeEEE
Confidence 56889999999996 666777887 4789999999999999999862 358999999987655445799999
Q ss_pred hh-hhc-cCChhHHHHHHHHHHhhccCCcEEEEeecCcceeeecccCCccc------ccCcEEEEEecCcc------cce
Q 042119 208 LA-ALV-GMSKEEKLTILGHIRKYMKDGGILLVRSAKGARAFLYPVVVEHD------LLDFEVLSAVHPND------DVI 273 (286)
Q Consensus 208 ~a-alv-g~~~~~k~~vl~~l~~~l~pgg~lv~r~~~g~r~~lyp~v~~~~------l~gf~~~~~~~P~~------~vi 273 (286)
.. ... ..+.++...+++++.+.|+|||.+++....+- . ....+ -.||++........ ..-
T Consensus 113 ~~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~~-~-----~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~~ 186 (195)
T 3cgg_A 113 SAGNVMGFLAEDGREPALANIHRALGADGRAVIGFGAGR-G-----WVFGDFLEVAERVGLELENAFESWDLKPFVQGSE 186 (195)
T ss_dssp ECCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEETTS-S-----CCHHHHHHHHHHHTEEEEEEESSTTCCBCCTTCS
T ss_pred ECCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeCCCC-C-----cCHHHHHHHHHHcCCEEeeeecccccCcCCCCCc
Confidence 75 332 34556778999999999999999998764321 1 11111 14898876654322 233
Q ss_pred eeeEEEeec
Q 042119 274 NSVVLVRNS 282 (286)
Q Consensus 274 nsvi~~r~~ 282 (286)
.-++++||+
T Consensus 187 ~~~~v~~k~ 195 (195)
T 3cgg_A 187 FLVAVFTKK 195 (195)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEecC
Confidence 447777774
No 77
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.49 E-value=1.2e-13 Score=119.53 Aligned_cols=107 Identities=17% Similarity=0.299 Sum_probs=88.0
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCC----CCCeEEEEccccchhhcCCCcc
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEF----EGRMKFLTRDIMEVKEQLGEYD 204 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l----~~~i~f~~~D~~~~~~~l~~fD 204 (286)
.++.+|||||||+ |..+..+++ .+.+|+++|+|+.+++.|++.+...+ + ..+++|.++|+.+++...+.||
T Consensus 29 ~~~~~vLdiG~G~-G~~~~~l~~---~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~d~~~~~~~~~~~D 103 (235)
T 3sm3_A 29 QEDDEILDIGCGS-GKISLELAS---KGYSVTGIDINSEAIRLAETAARSPG-LNQKTGGKAEFKVENASSLSFHDSSFD 103 (235)
T ss_dssp CTTCEEEEETCTT-SHHHHHHHH---TTCEEEEEESCHHHHHHHHHHTTCCS-CCSSSSCEEEEEECCTTSCCSCTTCEE
T ss_pred CCCCeEEEECCCC-CHHHHHHHh---CCCeEEEEECCHHHHHHHHHHHHhcC-CccccCcceEEEEecccccCCCCCcee
Confidence 5789999999997 667778887 48899999999999999999988777 4 3468999999988766556899
Q ss_pred eeehhhhc-cC-ChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 205 CIFLAALV-GM-SKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 205 ~V~~aalv-g~-~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
+|+....+ .+ +.+...++++++.+.|+|||++++.+
T Consensus 104 ~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (235)
T 3sm3_A 104 FAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVE 141 (235)
T ss_dssp EEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence 99876544 33 34455689999999999999999864
No 78
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.49 E-value=9.6e-14 Score=121.94 Aligned_cols=108 Identities=13% Similarity=0.187 Sum_probs=85.8
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhh---cCCCcce
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKE---QLGEYDC 205 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~---~l~~fD~ 205 (286)
..+.+|||||||+ |..++.+|+ ..+++.|+|||+|+++++.|++.++..| + .+++|+++|+.++.. +.+.||.
T Consensus 33 ~~~~~vLDiGcG~-G~~~~~lA~-~~p~~~v~giD~s~~~l~~a~~~~~~~~-l-~nv~~~~~Da~~~l~~~~~~~~~d~ 108 (218)
T 3dxy_A 33 REAPVTLEIGFGM-GASLVAMAK-DRPEQDFLGIEVHSPGVGACLASAHEEG-L-SNLRVMCHDAVEVLHKMIPDNSLRM 108 (218)
T ss_dssp SCCCEEEEESCTT-CHHHHHHHH-HCTTSEEEEECSCHHHHHHHHHHHHHTT-C-SSEEEECSCHHHHHHHHSCTTCEEE
T ss_pred CCCCeEEEEeeeC-hHHHHHHHH-HCCCCeEEEEEecHHHHHHHHHHHHHhC-C-CcEEEEECCHHHHHHHHcCCCChhe
Confidence 3678999999995 777788887 4789999999999999999999999998 4 569999999988532 3457999
Q ss_pred eehhhhccCCh--hHH-----HHHHHHHHhhccCCcEEEEee
Q 042119 206 IFLAALVGMSK--EEK-----LTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 206 V~~aalvg~~~--~~k-----~~vl~~l~~~l~pgg~lv~r~ 240 (286)
|++...-.++. ..| ..+++.+.+.|||||.+++.+
T Consensus 109 v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~t 150 (218)
T 3dxy_A 109 VQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMAT 150 (218)
T ss_dssp EEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEe
Confidence 98642222221 111 259999999999999999976
No 79
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.48 E-value=2.6e-13 Score=113.34 Aligned_cols=106 Identities=16% Similarity=0.168 Sum_probs=88.0
Q ss_pred cCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcce
Q 042119 126 NGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDC 205 (286)
Q Consensus 126 ~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~ 205 (286)
....++.+||++|||+ |..++.+++ .+.+|+++|+|+++++.|++.+...| +.+++++.++|+.+.....+.||+
T Consensus 29 ~~~~~~~~vldiG~G~-G~~~~~l~~---~~~~v~~~D~~~~~~~~a~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~D~ 103 (192)
T 1l3i_A 29 AEPGKNDVAVDVGCGT-GGVTLELAG---RVRRVYAIDRNPEAISTTEMNLQRHG-LGDNVTLMEGDAPEALCKIPDIDI 103 (192)
T ss_dssp HCCCTTCEEEEESCTT-SHHHHHHHT---TSSEEEEEESCHHHHHHHHHHHHHTT-CCTTEEEEESCHHHHHTTSCCEEE
T ss_pred cCCCCCCEEEEECCCC-CHHHHHHHH---hcCEEEEEECCHHHHHHHHHHHHHcC-CCcceEEEecCHHHhcccCCCCCE
Confidence 3567889999999997 666777877 33899999999999999999999988 677999999999773333358999
Q ss_pred eehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 206 IFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 206 V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
|+..... +....+++.+.+.|+|||.+++..
T Consensus 104 v~~~~~~----~~~~~~l~~~~~~l~~gG~l~~~~ 134 (192)
T 1l3i_A 104 AVVGGSG----GELQEILRIIKDKLKPGGRIIVTA 134 (192)
T ss_dssp EEESCCT----TCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEECCch----HHHHHHHHHHHHhcCCCcEEEEEe
Confidence 9976433 355789999999999999999865
No 80
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.48 E-value=3.6e-13 Score=116.54 Aligned_cols=109 Identities=20% Similarity=0.178 Sum_probs=86.7
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchh--hcCCCccee
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVK--EQLGEYDCI 206 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~--~~l~~fD~V 206 (286)
.++.+|||||||+ |..++.+|+ ..|+.+|+|+|+|+++++.|++.+...| + ++++|+++|+.+++ ...+.||+|
T Consensus 40 ~~~~~vLDiGcG~-G~~~~~la~-~~p~~~v~gvD~s~~~l~~a~~~~~~~~-~-~~v~~~~~d~~~~~~~~~~~~~D~i 115 (214)
T 1yzh_A 40 NDNPIHVEVGSGK-GAFVSGMAK-QNPDINYIGIDIQKSVLSYALDKVLEVG-V-PNIKLLWVDGSDLTDYFEDGEIDRL 115 (214)
T ss_dssp SCCCEEEEESCTT-SHHHHHHHH-HCTTSEEEEEESCHHHHHHHHHHHHHHC-C-SSEEEEECCSSCGGGTSCTTCCSEE
T ss_pred CCCCeEEEEccCc-CHHHHHHHH-HCCCCCEEEEEcCHHHHHHHHHHHHHcC-C-CCEEEEeCCHHHHHhhcCCCCCCEE
Confidence 4678999999996 666677887 4688999999999999999999999999 4 78999999998865 233579999
Q ss_pred ehhhhccCChh-------HHHHHHHHHHhhccCCcEEEEeec
Q 042119 207 FLAALVGMSKE-------EKLTILGHIRKYMKDGGILLVRSA 241 (286)
Q Consensus 207 ~~aalvg~~~~-------~k~~vl~~l~~~l~pgg~lv~r~~ 241 (286)
+......+... ....+++.+.+.|+|||.+++.+.
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (214)
T 1yzh_A 116 YLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTD 157 (214)
T ss_dssp EEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEES
T ss_pred EEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeC
Confidence 86532222110 115799999999999999999763
No 81
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.48 E-value=4.7e-13 Score=116.35 Aligned_cols=100 Identities=12% Similarity=0.164 Sum_probs=79.3
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceee-
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIF- 207 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~- 207 (286)
.++.+||+||||+ |..+..+++ .+.+|+++|+|+++++.|++.. .+++++++|+.+.+. .+.||+|+
T Consensus 39 ~~~~~vLdiG~G~-G~~~~~l~~---~~~~v~~~D~s~~~~~~a~~~~-------~~~~~~~~d~~~~~~-~~~~D~v~~ 106 (239)
T 3bxo_A 39 PEASSLLDVACGT-GTHLEHFTK---EFGDTAGLELSEDMLTHARKRL-------PDATLHQGDMRDFRL-GRKFSAVVS 106 (239)
T ss_dssp TTCCEEEEETCTT-SHHHHHHHH---HHSEEEEEESCHHHHHHHHHHC-------TTCEEEECCTTTCCC-SSCEEEEEE
T ss_pred CCCCeEEEecccC-CHHHHHHHH---hCCcEEEEeCCHHHHHHHHHhC-------CCCEEEECCHHHccc-CCCCcEEEE
Confidence 6779999999997 555667777 2459999999999999999862 368999999987654 35799999
Q ss_pred hh-hhccC-ChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 208 LA-ALVGM-SKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 208 ~a-alvg~-~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
.. .+..+ +.++..++++++.+.|+|||.+++..
T Consensus 107 ~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (239)
T 3bxo_A 107 MFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEP 141 (239)
T ss_dssp CTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred cCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 33 22222 34677899999999999999999964
No 82
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.48 E-value=3.2e-13 Score=117.82 Aligned_cols=105 Identities=11% Similarity=0.122 Sum_probs=79.2
Q ss_pred CCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchh---hcCCCc
Q 042119 127 GVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVK---EQLGEY 203 (286)
Q Consensus 127 ~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~---~~l~~f 203 (286)
.+.++.+|||||||+ |..+..+|+. .++++|+|+|+|+++++.+.+.++.. .++.++++|+.+.. ...+.|
T Consensus 54 ~~~~g~~VLDlGcGt-G~~~~~la~~-~~~~~V~gvD~s~~~l~~~~~~a~~~----~~v~~~~~d~~~~~~~~~~~~~f 127 (210)
T 1nt2_A 54 KLRGDERVLYLGAAS-GTTVSHLADI-VDEGIIYAVEYSAKPFEKLLELVRER----NNIIPLLFDASKPWKYSGIVEKV 127 (210)
T ss_dssp CCCSSCEEEEETCTT-SHHHHHHHHH-TTTSEEEEECCCHHHHHHHHHHHHHC----SSEEEECSCTTCGGGTTTTCCCE
T ss_pred CCCCCCEEEEECCcC-CHHHHHHHHH-cCCCEEEEEECCHHHHHHHHHHHhcC----CCeEEEEcCCCCchhhcccccce
Confidence 457889999999997 5566777773 44679999999999988777766643 36899999987641 112579
Q ss_pred ceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 204 DCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 204 D~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
|+|+.... ...+...+++++.+.|||||.+++..
T Consensus 128 D~V~~~~~---~~~~~~~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 128 DLIYQDIA---QKNQIEILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp EEEEECCC---STTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEEEecc---ChhHHHHHHHHHHHHhCCCCEEEEEE
Confidence 99996621 22344456999999999999998874
No 83
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.47 E-value=3.6e-14 Score=128.02 Aligned_cols=98 Identities=13% Similarity=0.091 Sum_probs=80.2
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeeh
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFL 208 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~ 208 (286)
..+.+|||||||+ |..+..|++ .+.+|+|+|+|++|++.|++. .+++|+++|+.+++.+.+.||+|+.
T Consensus 38 ~~~~~vLDvGcGt-G~~~~~l~~---~~~~v~gvD~s~~ml~~a~~~--------~~v~~~~~~~e~~~~~~~sfD~v~~ 105 (257)
T 4hg2_A 38 PARGDALDCGCGS-GQASLGLAE---FFERVHAVDPGEAQIRQALRH--------PRVTYAVAPAEDTGLPPASVDVAIA 105 (257)
T ss_dssp SCSSEEEEESCTT-TTTHHHHHT---TCSEEEEEESCHHHHHTCCCC--------TTEEEEECCTTCCCCCSSCEEEEEE
T ss_pred CCCCCEEEEcCCC-CHHHHHHHH---hCCEEEEEeCcHHhhhhhhhc--------CCceeehhhhhhhcccCCcccEEEE
Confidence 4567999999997 677788887 678999999999999877641 4799999999988777678999987
Q ss_pred hhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 209 AALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 209 aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
+..+++- +..+++.+++|+|||||+|++-.
T Consensus 106 ~~~~h~~--~~~~~~~e~~rvLkpgG~l~~~~ 135 (257)
T 4hg2_A 106 AQAMHWF--DLDRFWAELRRVARPGAVFAAVT 135 (257)
T ss_dssp CSCCTTC--CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eeehhHh--hHHHHHHHHHHHcCCCCEEEEEE
Confidence 6544443 34579999999999999998754
No 84
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.47 E-value=2.7e-13 Score=121.74 Aligned_cols=109 Identities=16% Similarity=0.100 Sum_probs=88.7
Q ss_pred CCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhh-cCCCccee
Q 042119 128 VVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKE-QLGEYDCI 206 (286)
Q Consensus 128 ~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~-~l~~fD~V 206 (286)
+.++.+|||||||++.++ ..+++. +..+|+|+|+|+++++.|++.+...| +..+++|+++|+.+.+. ..+.||+|
T Consensus 62 ~~~~~~vLDiGcG~G~~~-~~l~~~--~~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~~~~~~~~fD~v 137 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDL-LKYERA--GIGEYYGVDIAEVSINDARVRARNMK-RRFKVFFRAQDSYGRHMDLGKEFDVI 137 (298)
T ss_dssp CCTTCEEEEETCTTTTTH-HHHHHH--TCSEEEEEESCHHHHHHHHHHHHTSC-CSSEEEEEESCTTTSCCCCSSCEEEE
T ss_pred CCCCCeEEEECCCCCHHH-HHHHHC--CCCEEEEEECCHHHHHHHHHHHHhcC-CCccEEEEECCccccccCCCCCcCEE
Confidence 467899999999975554 557762 45699999999999999999999888 66789999999987655 34579999
Q ss_pred ehhhhcc---CChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 207 FLAALVG---MSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 207 ~~aalvg---~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
+...... .+.++..++++++.+.|+|||.+++..
T Consensus 138 ~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 174 (298)
T 1ri5_A 138 SSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTV 174 (298)
T ss_dssp EEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 8654332 345778899999999999999999875
No 85
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.46 E-value=2.4e-13 Score=115.94 Aligned_cols=124 Identities=11% Similarity=0.266 Sum_probs=91.8
Q ss_pred cCcCccchhhhhHHHHHHHHhcCCCCCCEEEEeccCCChhhHHHHHhhcCCCc-EEEEEeCChHHHHHHHHHHHhcCCCC
Q 042119 105 LFPYYGNYVKLSKLEYTILSENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTST-HFDNFDIDEAANDVARSIVASDAEFE 183 (286)
Q Consensus 105 ~fpy~~ny~~l~~~E~~~l~~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~-~V~~iDid~~ai~~Ar~~~~~~g~l~ 183 (286)
.|.||..+..+.+. +.+. ..++.+||+||||+ |..+..+++ .+. +|+++|+|+.+++.|++.... .
T Consensus 22 ~~~~~~~~~~~~~~----l~~~-~~~~~~vLdiGcG~-G~~~~~l~~---~~~~~v~~~D~s~~~~~~a~~~~~~----~ 88 (215)
T 2pxx_A 22 PYDWFGDFSSFRAL----LEPE-LRPEDRILVLGCGN-SALSYELFL---GGFPNVTSVDYSSVVVAAMQACYAH----V 88 (215)
T ss_dssp CCCTTCCHHHHHHH----HGGG-CCTTCCEEEETCTT-CSHHHHHHH---TTCCCEEEEESCHHHHHHHHHHTTT----C
T ss_pred CcccccCHHHHHHH----HHHh-cCCCCeEEEECCCC-cHHHHHHHH---cCCCcEEEEeCCHHHHHHHHHhccc----C
Confidence 45666666654332 2222 36789999999997 566677777 233 899999999999999998653 2
Q ss_pred CCeEEEEccccchhhcCCCcceeehhhhc-cC-------------ChhHHHHHHHHHHhhccCCcEEEEeec
Q 042119 184 GRMKFLTRDIMEVKEQLGEYDCIFLAALV-GM-------------SKEEKLTILGHIRKYMKDGGILLVRSA 241 (286)
Q Consensus 184 ~~i~f~~~D~~~~~~~l~~fD~V~~aalv-g~-------------~~~~k~~vl~~l~~~l~pgg~lv~r~~ 241 (286)
.+++++++|+.+++...+.||+|+..... .+ +.++..++++++.+.|+|||.+++.+.
T Consensus 89 ~~i~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 160 (215)
T 2pxx_A 89 PQLRWETMDVRKLDFPSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTS 160 (215)
T ss_dssp TTCEEEECCTTSCCSCSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred CCcEEEEcchhcCCCCCCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeC
Confidence 57999999998865544679999853221 11 134667899999999999999999874
No 86
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.46 E-value=1.6e-13 Score=120.56 Aligned_cols=106 Identities=12% Similarity=0.215 Sum_probs=85.7
Q ss_pred CCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeehh
Q 042119 130 QPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFLA 209 (286)
Q Consensus 130 ~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~a 209 (286)
++.+|||||||+ |..+..++++ .+.+|+++|+|+++++.|++.+...| ..+++|+++|+.+++...+.||+|+..
T Consensus 79 ~~~~vLDiGcG~-G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~~d~~~~~~~~~~fD~v~~~ 153 (241)
T 2ex4_A 79 GTSCALDCGAGI-GRITKRLLLP--LFREVDMVDITEDFLVQAKTYLGEEG--KRVRNYFCCGLQDFTPEPDSYDVIWIQ 153 (241)
T ss_dssp CCSEEEEETCTT-THHHHHTTTT--TCSEEEEEESCHHHHHHHHHHTGGGG--GGEEEEEECCGGGCCCCSSCEEEEEEE
T ss_pred CCCEEEEECCCC-CHHHHHHHHh--cCCEEEEEeCCHHHHHHHHHHhhhcC--CceEEEEEcChhhcCCCCCCEEEEEEc
Confidence 589999999996 6666777762 36799999999999999999987764 257999999998776554579999876
Q ss_pred hhc-cCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 210 ALV-GMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 210 alv-g~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
..+ .++.+...++++++.+.|+|||.+++.+
T Consensus 154 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 185 (241)
T 2ex4_A 154 WVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKD 185 (241)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred chhhhCCHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 543 3344446689999999999999999965
No 87
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.46 E-value=2.1e-13 Score=116.83 Aligned_cols=102 Identities=13% Similarity=0.162 Sum_probs=83.4
Q ss_pred CCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceee
Q 042119 128 VVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIF 207 (286)
Q Consensus 128 ~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~ 207 (286)
..++.+|||||||+ |..+..+++ .+.+|+|+|+|+++++.|++ .|. .+++|+++|+.+. ...+.||+|+
T Consensus 44 ~~~~~~vLdiG~G~-G~~~~~l~~---~~~~v~~~D~s~~~~~~a~~----~~~--~~~~~~~~d~~~~-~~~~~~D~v~ 112 (218)
T 3ou2_A 44 GNIRGDVLELASGT-GYWTRHLSG---LADRVTALDGSAEMIAEAGR----HGL--DNVEFRQQDLFDW-TPDRQWDAVF 112 (218)
T ss_dssp TTSCSEEEEESCTT-SHHHHHHHH---HSSEEEEEESCHHHHHHHGG----GCC--TTEEEEECCTTSC-CCSSCEEEEE
T ss_pred CCCCCeEEEECCCC-CHHHHHHHh---cCCeEEEEeCCHHHHHHHHh----cCC--CCeEEEecccccC-CCCCceeEEE
Confidence 35678999999997 666777887 37899999999999999998 452 6899999999876 4446899999
Q ss_pred hhhhc-cCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 208 LAALV-GMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 208 ~aalv-g~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
....+ ..+.+....+++++.+.|+|||.+++.+
T Consensus 113 ~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 146 (218)
T 3ou2_A 113 FAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVD 146 (218)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 76544 4444446899999999999999999875
No 88
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.46 E-value=1.8e-13 Score=126.05 Aligned_cols=108 Identities=14% Similarity=0.157 Sum_probs=80.0
Q ss_pred CCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCC-----CeEEEEccc------cchhh
Q 042119 130 QPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEG-----RMKFLTRDI------MEVKE 198 (286)
Q Consensus 130 ~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~-----~i~f~~~D~------~~~~~ 198 (286)
++.+|||||||+++.+..+++. .+++|+|+|+|++|++.|++.....+ ... +++|.++|+ .++..
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~---~~~~v~GiD~S~~~l~~A~~~~~~~~-~~~~~~~~~~~f~~~d~~~d~~~~~l~~ 123 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYG---EIALLVATDPDADAIARGNERYNKLN-SGIKTKYYKFDYIQETIRSDTFVSSVRE 123 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHT---TCSEEEEEESCHHHHHHHHHHHHHHC-C----CCCEEEEEECCTTSSSHHHHHHT
T ss_pred CCCeEEEEecCCcHhHHHHHhc---CCCeEEEEECCHHHHHHHHHHHHhcc-ccccccccccchhhhhcccchhhhhhhc
Confidence 4789999999986555544443 56899999999999999999988776 321 278989888 33322
Q ss_pred --cCCCcceeehhhhcc--CChhHHHHHHHHHHhhccCCcEEEEeec
Q 042119 199 --QLGEYDCIFLAALVG--MSKEEKLTILGHIRKYMKDGGILLVRSA 241 (286)
Q Consensus 199 --~l~~fD~V~~aalvg--~~~~~k~~vl~~l~~~l~pgg~lv~r~~ 241 (286)
+.+.||+|+....++ ++.+++..+++++++.|||||++++.+.
T Consensus 124 ~~~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 124 VFYFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTM 170 (302)
T ss_dssp TCCSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cccCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 235799997443221 2335667999999999999999998764
No 89
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.46 E-value=2.8e-13 Score=116.29 Aligned_cols=105 Identities=15% Similarity=0.148 Sum_probs=85.5
Q ss_pred hcCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcc
Q 042119 125 ENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYD 204 (286)
Q Consensus 125 ~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD 204 (286)
.....++.+||+||||+ |..+..+++ .+.+|+++|+|+++++.|++.++..| + .+++|+++|+.+.....+.||
T Consensus 72 ~l~~~~~~~vLdiG~G~-G~~~~~la~---~~~~v~~vD~~~~~~~~a~~~~~~~~-~-~~v~~~~~d~~~~~~~~~~~D 145 (210)
T 3lbf_A 72 LLELTPQSRVLEIGTGS-GYQTAILAH---LVQHVCSVERIKGLQWQARRRLKNLD-L-HNVSTRHGDGWQGWQARAPFD 145 (210)
T ss_dssp HTTCCTTCEEEEECCTT-SHHHHHHHH---HSSEEEEEESCHHHHHHHHHHHHHTT-C-CSEEEEESCGGGCCGGGCCEE
T ss_pred hcCCCCCCEEEEEcCCC-CHHHHHHHH---hCCEEEEEecCHHHHHHHHHHHHHcC-C-CceEEEECCcccCCccCCCcc
Confidence 34567899999999996 667788888 37999999999999999999999998 4 489999999987655556899
Q ss_pred eeehhhhccCChhHHHHHHHHHHhhccCCcEEEEeecC
Q 042119 205 CIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRSAK 242 (286)
Q Consensus 205 ~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~~~ 242 (286)
+|+.......- .+.+.+.|+|||++++.-..
T Consensus 146 ~i~~~~~~~~~-------~~~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 146 AIIVTAAPPEI-------PTALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp EEEESSBCSSC-------CTHHHHTEEEEEEEEEEECS
T ss_pred EEEEccchhhh-------hHHHHHhcccCcEEEEEEcC
Confidence 99987544221 12588999999999997654
No 90
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.46 E-value=4.4e-13 Score=116.59 Aligned_cols=148 Identities=14% Similarity=0.167 Sum_probs=98.8
Q ss_pred cCCCCCCEEEEeccC-CChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhh-cCCCc
Q 042119 126 NGVVQPKKVAFVGSG-PMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKE-QLGEY 203 (286)
Q Consensus 126 ~~~~~~~~VL~IG~G-~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~-~l~~f 203 (286)
....++.+|||+||| + |..++.+|+. .+.+|+++|+|+++++.|++.+...| + +++++++|+..... ..+.|
T Consensus 51 ~~~~~~~~vLDlG~G~~-G~~~~~la~~--~~~~v~~vD~s~~~~~~a~~~~~~~~-~--~v~~~~~d~~~~~~~~~~~f 124 (230)
T 3evz_A 51 TFLRGGEVALEIGTGHT-AMMALMAEKF--FNCKVTATEVDEEFFEYARRNIERNN-S--NVRLVKSNGGIIKGVVEGTF 124 (230)
T ss_dssp TTCCSSCEEEEECCTTT-CHHHHHHHHH--HCCEEEEEECCHHHHHHHHHHHHHTT-C--CCEEEECSSCSSTTTCCSCE
T ss_pred hhcCCCCEEEEcCCCHH-HHHHHHHHHh--cCCEEEEEECCHHHHHHHHHHHHHhC-C--CcEEEeCCchhhhhcccCce
Confidence 345788999999999 7 5667778873 28999999999999999999999998 4 89999999743322 22579
Q ss_pred ceeehhhhc-cC-----------------ChhHHHHHHHHHHhhccCCcEEEEeecCcceeeecccC-CcccccCcEEEE
Q 042119 204 DCIFLAALV-GM-----------------SKEEKLTILGHIRKYMKDGGILLVRSAKGARAFLYPVV-VEHDLLDFEVLS 264 (286)
Q Consensus 204 D~V~~aalv-g~-----------------~~~~k~~vl~~l~~~l~pgg~lv~r~~~g~r~~lyp~v-~~~~l~gf~~~~ 264 (286)
|+|+...-. .. ..+...++++++.+.|+|||.+++-..++.... ..+ ..-.-.||++..
T Consensus 125 D~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~--~~~~~~l~~~g~~~~~ 202 (230)
T 3evz_A 125 DVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKEKLL--NVIKERGIKLGYSVKD 202 (230)
T ss_dssp EEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCHHHH--HHHHHHHHHTTCEEEE
T ss_pred eEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccHhHH--HHHHHHHHHcCCceEE
Confidence 999854211 00 012236899999999999999998654431000 000 000114887765
Q ss_pred EecCcccceeeeEEEee
Q 042119 265 AVHPNDDVINSVVLVRN 281 (286)
Q Consensus 265 ~~~P~~~vinsvi~~r~ 281 (286)
.....+.-+..++...|
T Consensus 203 ~~~~~g~~~~~~l~f~~ 219 (230)
T 3evz_A 203 IKFKVGTRWRHSLIFFK 219 (230)
T ss_dssp EEECCCC-CEEEEEEEC
T ss_pred EEecCCCeEEEEEEEec
Confidence 44445555554555444
No 91
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.46 E-value=9e-13 Score=126.62 Aligned_cols=150 Identities=15% Similarity=0.160 Sum_probs=102.1
Q ss_pred hHhhhHHHHHHhcCCCCcccccccCcCcc--chhhhhHHHH-HHHHhcCCCCCCEEEEeccCCChhhHHHHHhhcCCCcE
Q 042119 82 EGLLELEFATFLTKIPQPLNNLSLFPYYG--NYVKLSKLEY-TILSENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTH 158 (286)
Q Consensus 82 e~~lE~~~A~~l~~~~~p~~~L~~fpy~~--ny~~l~~~E~-~~l~~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~ 158 (286)
...|..-|.+.+. +| ..|+.+.-|. .|-.....-+ ..+....+.++.+|||||||. |..++.+|+. .+..+
T Consensus 126 ~~Il~~~Y~r~V~---~~-~~L~~Ye~Fs~~vYGEt~~~~i~~il~~l~l~~gd~VLDLGCGt-G~l~l~lA~~-~g~~k 199 (438)
T 3uwp_A 126 RHILQQVYNHSVT---DP-EKLNNYEPFSPEVYGETSFDLVAQMIDEIKMTDDDLFVDLGSGV-GQVVLQVAAA-TNCKH 199 (438)
T ss_dssp HHHHHHHHHHHCS---CG-GGSCCCSSSCGGGGGGTHHHHHHHHHHHHCCCTTCEEEEESCTT-SHHHHHHHHH-CCCSE
T ss_pred HHHHHHHHhhcCC---CH-HHhcCcccCCCcccCCCCHHHHHHHHHhcCCCCCCEEEEeCCCC-CHHHHHHHHH-CCCCE
Confidence 4445555555553 22 3444432221 2333332222 234445678999999999996 6667777763 33335
Q ss_pred EEEEeCChHHHHHHHHHH-------HhcCCC-CCCeEEEEccccchhhcC--CCcceeehhhhccCChhHHHHHHHHHHh
Q 042119 159 FDNFDIDEAANDVARSIV-------ASDAEF-EGRMKFLTRDIMEVKEQL--GEYDCIFLAALVGMSKEEKLTILGHIRK 228 (286)
Q Consensus 159 V~~iDid~~ai~~Ar~~~-------~~~g~l-~~~i~f~~~D~~~~~~~l--~~fD~V~~aalvg~~~~~k~~vl~~l~~ 228 (286)
|+|||+++++++.|++.+ +..| + ..+|+|++||+.+.+... ..||+||..... +. +++.+.|.++.+
T Consensus 200 VvGIDiS~~~lelAr~n~e~frkr~~~~G-l~~~rVefi~GD~~~lp~~d~~~~aDVVf~Nn~~-F~-pdl~~aL~Ei~R 276 (438)
T 3uwp_A 200 HYGVEKADIPAKYAETMDREFRKWMKWYG-KKHAEYTLERGDFLSEEWRERIANTSVIFVNNFA-FG-PEVDHQLKERFA 276 (438)
T ss_dssp EEEEECCHHHHHHHHHHHHHHHHHHHHHT-BCCCEEEEEECCTTSHHHHHHHHTCSEEEECCTT-CC-HHHHHHHHHHHT
T ss_pred EEEEeCCHHHHHHHHHHHHHHHHHHHHhC-CCCCCeEEEECcccCCccccccCCccEEEEcccc-cC-chHHHHHHHHHH
Confidence 999999999999999864 3456 4 368999999998876532 479999965432 22 577788999999
Q ss_pred hccCCcEEEEee
Q 042119 229 YMKDGGILLVRS 240 (286)
Q Consensus 229 ~l~pgg~lv~r~ 240 (286)
.|||||+|++-.
T Consensus 277 vLKPGGrIVssE 288 (438)
T 3uwp_A 277 NMKEGGRIVSSK 288 (438)
T ss_dssp TSCTTCEEEESS
T ss_pred cCCCCcEEEEee
Confidence 999999999864
No 92
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.46 E-value=2.4e-13 Score=119.76 Aligned_cols=109 Identities=17% Similarity=0.255 Sum_probs=87.6
Q ss_pred HHHHhcCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcC
Q 042119 121 TILSENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQL 200 (286)
Q Consensus 121 ~~l~~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l 200 (286)
.++......++.+|||||||+ |..+..+++ ..++++|+++|+|+++++.|++. . .+++|+++|+.+.+ ..
T Consensus 24 ~l~~~~~~~~~~~vLdiG~G~-G~~~~~l~~-~~~~~~v~~~D~s~~~~~~a~~~----~---~~~~~~~~d~~~~~-~~ 93 (259)
T 2p35_A 24 DLLAQVPLERVLNGYDLGCGP-GNSTELLTD-RYGVNVITGIDSDDDMLEKAADR----L---PNTNFGKADLATWK-PA 93 (259)
T ss_dssp HHHTTCCCSCCSSEEEETCTT-THHHHHHHH-HHCTTSEEEEESCHHHHHHHHHH----S---TTSEEEECCTTTCC-CS
T ss_pred HHHHhcCCCCCCEEEEecCcC-CHHHHHHHH-hCCCCEEEEEECCHHHHHHHHHh----C---CCcEEEECChhhcC-cc
Confidence 345455567889999999996 556667776 35789999999999999999987 2 47999999998876 44
Q ss_pred CCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 201 GEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 201 ~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
+.||+|+....+.+ .++...+++++.+.|+|||.+++..
T Consensus 94 ~~fD~v~~~~~l~~-~~~~~~~l~~~~~~L~pgG~l~~~~ 132 (259)
T 2p35_A 94 QKADLLYANAVFQW-VPDHLAVLSQLMDQLESGGVLAVQM 132 (259)
T ss_dssp SCEEEEEEESCGGG-STTHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CCcCEEEEeCchhh-CCCHHHHHHHHHHhcCCCeEEEEEe
Confidence 67999997654432 2467789999999999999999975
No 93
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.46 E-value=4.9e-13 Score=118.04 Aligned_cols=111 Identities=18% Similarity=0.239 Sum_probs=83.2
Q ss_pred CCCCCCEEEEeccCCChhhHHHHHhhcCCCc-EEEEEeCChHHHHHHHHHHHhcCC------------------------
Q 042119 127 GVVQPKKVAFVGSGPMPLTSIIMAKHHLTST-HFDNFDIDEAANDVARSIVASDAE------------------------ 181 (286)
Q Consensus 127 ~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~-~V~~iDid~~ai~~Ar~~~~~~g~------------------------ 181 (286)
+..++.+|||||||+ |..++.+++ .+. +|+|+|+|+.+++.|++.+...+.
T Consensus 53 ~~~~~~~vLDlGcG~-G~~~~~l~~---~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (265)
T 2i62_A 53 GAVKGELLIDIGSGP-TIYQLLSAC---ESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEK 128 (265)
T ss_dssp SSCCEEEEEEESCTT-CCGGGTTGG---GTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHH
T ss_pred cccCCCEEEEECCCc-cHHHHHHhh---cccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHH
Confidence 456788999999997 555566776 444 999999999999999998765430
Q ss_pred ---CCCCe-EEEEccccchhh-cC---CCcceeehhhhcc---CChhHHHHHHHHHHhhccCCcEEEEeec
Q 042119 182 ---FEGRM-KFLTRDIMEVKE-QL---GEYDCIFLAALVG---MSKEEKLTILGHIRKYMKDGGILLVRSA 241 (286)
Q Consensus 182 ---l~~~i-~f~~~D~~~~~~-~l---~~fD~V~~aalvg---~~~~~k~~vl~~l~~~l~pgg~lv~r~~ 241 (286)
+..++ +++++|+.+... .. +.||+|+....+. .+.++...+++++.+.|+|||.+++...
T Consensus 129 ~~~l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 199 (265)
T 2i62_A 129 EEKLRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDA 199 (265)
T ss_dssp HHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred HHHhhhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEec
Confidence 00128 999999987543 22 5799998653321 1345788999999999999999999763
No 94
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.46 E-value=2.2e-13 Score=117.56 Aligned_cols=107 Identities=9% Similarity=0.168 Sum_probs=83.6
Q ss_pred CCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCC-CCeEEEEccccchhhc--CCC-cce
Q 042119 130 QPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFE-GRMKFLTRDIMEVKEQ--LGE-YDC 205 (286)
Q Consensus 130 ~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~-~~i~f~~~D~~~~~~~--l~~-fD~ 205 (286)
++.+|||+|||++.+ ++.++++ ...+|+++|+|+++++.|++.++..| +. ++++|+++|+.+.... .+. ||+
T Consensus 53 ~~~~vLDlGcGtG~~-~~~~~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~-~~~~~v~~~~~d~~~~~~~~~~~~~fD~ 128 (201)
T 2ift_A 53 HQSECLDGFAGSGSL-GFEALSR--QAKKVTFLELDKTVANQLKKNLQTLK-CSSEQAEVINQSSLDFLKQPQNQPHFDV 128 (201)
T ss_dssp TTCEEEETTCTTCHH-HHHHHHT--TCSEEEEECSCHHHHHHHHHHHHHTT-CCTTTEEEECSCHHHHTTSCCSSCCEEE
T ss_pred CCCeEEEcCCccCHH-HHHHHHc--cCCEEEEEECCHHHHHHHHHHHHHhC-CCccceEEEECCHHHHHHhhccCCCCCE
Confidence 578999999997555 4554541 33699999999999999999999988 54 6899999999876543 257 999
Q ss_pred eehhhhccCChhHHHHHHHHH--HhhccCCcEEEEeecC
Q 042119 206 IFLAALVGMSKEEKLTILGHI--RKYMKDGGILLVRSAK 242 (286)
Q Consensus 206 V~~aalvg~~~~~k~~vl~~l--~~~l~pgg~lv~r~~~ 242 (286)
|+.+.... .....++++.+ .+.|+|||++++....
T Consensus 129 I~~~~~~~--~~~~~~~l~~~~~~~~LkpgG~l~i~~~~ 165 (201)
T 2ift_A 129 VFLDPPFH--FNLAEQAISLLCENNWLKPNALIYVETEK 165 (201)
T ss_dssp EEECCCSS--SCHHHHHHHHHHHTTCEEEEEEEEEEEES
T ss_pred EEECCCCC--CccHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 99764322 34666788998 6679999999987643
No 95
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.46 E-value=3e-13 Score=119.29 Aligned_cols=103 Identities=14% Similarity=0.146 Sum_probs=83.7
Q ss_pred CCCCCEEEEeccCCChhhHHHHHhhcCCCc-EEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCccee
Q 042119 128 VVQPKKVAFVGSGPMPLTSIIMAKHHLTST-HFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCI 206 (286)
Q Consensus 128 ~~~~~~VL~IG~G~lp~tai~lA~~~~~g~-~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V 206 (286)
..++.+|||||||+ |..+..+++ .+. +|+|+|+|+++++.|++... + .+++|+++|+.+++...+.||+|
T Consensus 42 ~~~~~~vLD~GcG~-G~~~~~l~~---~~~~~v~~vD~s~~~~~~a~~~~~--~---~~~~~~~~d~~~~~~~~~~fD~v 112 (253)
T 3g5l_A 42 DFNQKTVLDLGCGF-GWHCIYAAE---HGAKKVLGIDLSERMLTEAKRKTT--S---PVVCYEQKAIEDIAIEPDAYNVV 112 (253)
T ss_dssp CCTTCEEEEETCTT-CHHHHHHHH---TTCSEEEEEESCHHHHHHHHHHCC--C---TTEEEEECCGGGCCCCTTCEEEE
T ss_pred ccCCCEEEEECCCC-CHHHHHHHH---cCCCEEEEEECCHHHHHHHHHhhc--c---CCeEEEEcchhhCCCCCCCeEEE
Confidence 35789999999997 566677777 344 99999999999999999854 2 68999999998876555689999
Q ss_pred ehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 207 FLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 207 ~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
+....+.. .++..++++++.+.|+|||.+++..
T Consensus 113 ~~~~~l~~-~~~~~~~l~~~~~~LkpgG~l~~~~ 145 (253)
T 3g5l_A 113 LSSLALHY-IASFDDICKKVYINLKSSGSFIFSV 145 (253)
T ss_dssp EEESCGGG-CSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEchhhhh-hhhHHHHHHHHHHHcCCCcEEEEEe
Confidence 97654322 2567789999999999999999963
No 96
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.45 E-value=4.1e-13 Score=123.78 Aligned_cols=107 Identities=20% Similarity=0.249 Sum_probs=88.3
Q ss_pred CCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCccee
Q 042119 127 GVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCI 206 (286)
Q Consensus 127 ~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V 206 (286)
...+ .+|+|||||+ |..+..+++ .+|+.+++++|+ +.+++.|++.+...| +.++++|+.+|..+ +.+ ++||+|
T Consensus 165 ~~~~-~~vlDvG~G~-G~~~~~l~~-~~p~~~~~~~D~-~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~-~~~-~~~D~v 237 (334)
T 2ip2_A 165 DFRG-RSFVDVGGGS-GELTKAILQ-AEPSARGVMLDR-EGSLGVARDNLSSLL-AGERVSLVGGDMLQ-EVP-SNGDIY 237 (334)
T ss_dssp CCTT-CEEEEETCTT-CHHHHHHHH-HCTTCEEEEEEC-TTCTHHHHHHTHHHH-HTTSEEEEESCTTT-CCC-SSCSEE
T ss_pred CCCC-CEEEEeCCCc-hHHHHHHHH-HCCCCEEEEeCc-HHHHHHHHHHHhhcC-CCCcEEEecCCCCC-CCC-CCCCEE
Confidence 3445 8999999997 556667776 378999999999 999999999988888 67899999999876 332 579999
Q ss_pred ehhhhc-cCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 207 FLAALV-GMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 207 ~~aalv-g~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
+..... .++.+...++++++++.|+|||.+++.+
T Consensus 238 ~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e 272 (334)
T 2ip2_A 238 LLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIE 272 (334)
T ss_dssp EEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred EEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 976544 4666677799999999999999998875
No 97
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.45 E-value=7.8e-13 Score=116.10 Aligned_cols=104 Identities=9% Similarity=0.080 Sum_probs=83.0
Q ss_pred CCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcC-----CC
Q 042119 128 VVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQL-----GE 202 (286)
Q Consensus 128 ~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l-----~~ 202 (286)
..++.+|||||||+ |..+..+|+ .+.+|+|+|+|+.+++.|++.. + ..+++|+++|+.+..... ..
T Consensus 54 ~~~~~~vLD~GcG~-G~~~~~la~---~~~~v~gvD~s~~~~~~a~~~~---~--~~~~~~~~~d~~~~~~~~~~~~~~~ 124 (245)
T 3ggd_A 54 FNPELPLIDFACGN-GTQTKFLSQ---FFPRVIGLDVSKSALEIAAKEN---T--AANISYRLLDGLVPEQAAQIHSEIG 124 (245)
T ss_dssp SCTTSCEEEETCTT-SHHHHHHHH---HSSCEEEEESCHHHHHHHHHHS---C--CTTEEEEECCTTCHHHHHHHHHHHC
T ss_pred cCCCCeEEEEcCCC-CHHHHHHHH---hCCCEEEEECCHHHHHHHHHhC---c--ccCceEEECcccccccccccccccC
Confidence 46788999999996 667778887 3449999999999999999975 3 248999999998755422 24
Q ss_pred cceeehhhhc-cCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 203 YDCIFLAALV-GMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 203 fD~V~~aalv-g~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
||+|+..... ..+.++..++++++.+.|||||++++.+
T Consensus 125 ~d~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 163 (245)
T 3ggd_A 125 DANIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIE 163 (245)
T ss_dssp SCEEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEE
T ss_pred ccEEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 8999876554 3455678899999999999999987764
No 98
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.45 E-value=7.7e-13 Score=109.65 Aligned_cols=137 Identities=14% Similarity=0.164 Sum_probs=95.7
Q ss_pred CCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceee
Q 042119 128 VVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIF 207 (286)
Q Consensus 128 ~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~ 207 (286)
..++.+|||||||+ |..+..+++ .+.+|+++|+|+++++.|++. . .++++.++| .+...+.||+|+
T Consensus 15 ~~~~~~vLDiG~G~-G~~~~~l~~---~~~~v~~vD~s~~~~~~a~~~----~---~~v~~~~~d---~~~~~~~~D~v~ 80 (170)
T 3i9f_A 15 EGKKGVIVDYGCGN-GFYCKYLLE---FATKLYCIDINVIALKEVKEK----F---DSVITLSDP---KEIPDNSVDFIL 80 (170)
T ss_dssp SSCCEEEEEETCTT-CTTHHHHHT---TEEEEEEECSCHHHHHHHHHH----C---TTSEEESSG---GGSCTTCEEEEE
T ss_pred cCCCCeEEEECCCC-CHHHHHHHh---hcCeEEEEeCCHHHHHHHHHh----C---CCcEEEeCC---CCCCCCceEEEE
Confidence 46788999999997 566777877 335999999999999999998 2 579999999 344446799999
Q ss_pred hhhhccCChhHHHHHHHHHHhhccCCcEEEEeecCcceeeecc----cCCcc----cccCcEEEEEecCcccceeeeEEE
Q 042119 208 LAALVGMSKEEKLTILGHIRKYMKDGGILLVRSAKGARAFLYP----VVVEH----DLLDFEVLSAVHPNDDVINSVVLV 279 (286)
Q Consensus 208 ~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~~~g~r~~lyp----~v~~~----~l~gf~~~~~~~P~~~vinsvi~~ 279 (286)
...... ..++...+++++.+.|+|||.+++.+...-.....| ..... -+.||++........ .+-.+++
T Consensus 81 ~~~~l~-~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Gf~~~~~~~~~~--~~~~l~~ 157 (170)
T 3i9f_A 81 FANSFH-DMDDKQHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFSNFVVEKRFNPTP--YHFGLVL 157 (170)
T ss_dssp EESCST-TCSCHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTTTEEEEEEECSST--TEEEEEE
T ss_pred Eccchh-cccCHHHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHhCcEEEEccCCCC--ceEEEEE
Confidence 765443 225677899999999999999999763211111111 11222 124999887766553 2235555
Q ss_pred ee
Q 042119 280 RN 281 (286)
Q Consensus 280 r~ 281 (286)
+|
T Consensus 158 ~~ 159 (170)
T 3i9f_A 158 KR 159 (170)
T ss_dssp EE
T ss_pred ec
Confidence 55
No 99
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.45 E-value=2.7e-13 Score=122.59 Aligned_cols=108 Identities=19% Similarity=0.272 Sum_probs=89.1
Q ss_pred CCCCCEEEEeccCCChhhHHHHHhhcCC-CcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCccee
Q 042119 128 VVQPKKVAFVGSGPMPLTSIIMAKHHLT-STHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCI 206 (286)
Q Consensus 128 ~~~~~~VL~IG~G~lp~tai~lA~~~~~-g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V 206 (286)
..++.+|||||||+ |..++.+++ .++ +++|+|+|+|+.+++.|++.+...+ .+++|+++|+.+.+.+ +.||+|
T Consensus 20 ~~~~~~vLDiGcG~-G~~~~~l~~-~~~~~~~v~gvD~s~~~~~~a~~~~~~~~---~~v~~~~~d~~~~~~~-~~fD~v 93 (284)
T 3gu3_A 20 ITKPVHIVDYGCGY-GYLGLVLMP-LLPEGSKYTGIDSGETLLAEARELFRLLP---YDSEFLEGDATEIELN-DKYDIA 93 (284)
T ss_dssp CCSCCEEEEETCTT-THHHHHHTT-TSCTTCEEEEEESCHHHHHHHHHHHHSSS---SEEEEEESCTTTCCCS-SCEEEE
T ss_pred cCCCCeEEEecCCC-CHHHHHHHH-hCCCCCEEEEEECCHHHHHHHHHHHHhcC---CceEEEEcchhhcCcC-CCeeEE
Confidence 46889999999996 667788887 355 6999999999999999999998877 3899999999886653 579999
Q ss_pred ehhhhccCChhHHHHHHHHHHhhccCCcEEEEeecC
Q 042119 207 FLAALVGMSKEEKLTILGHIRKYMKDGGILLVRSAK 242 (286)
Q Consensus 207 ~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~~~ 242 (286)
+.....+. .++..++++++.+.|+|||.+++.+..
T Consensus 94 ~~~~~l~~-~~~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 94 ICHAFLLH-MTTPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp EEESCGGG-CSSHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EECChhhc-CCCHHHHHHHHHHHcCCCCEEEEEecc
Confidence 97654422 245678999999999999999987654
No 100
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.45 E-value=2.9e-13 Score=119.40 Aligned_cols=105 Identities=14% Similarity=0.178 Sum_probs=85.0
Q ss_pred CCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCccee
Q 042119 127 GVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCI 206 (286)
Q Consensus 127 ~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V 206 (286)
...++.+|||||||+ |..+..+++ .+.+|+|+|+|+++++.|++.+ .. ...+++|+++|+.+++...+.||+|
T Consensus 36 ~~~~~~~vLDiG~G~-G~~~~~l~~---~~~~v~~vD~s~~~~~~a~~~~-~~--~~~~~~~~~~d~~~~~~~~~~fD~v 108 (263)
T 2yqz_A 36 PKGEEPVFLELGVGT-GRIALPLIA---RGYRYIALDADAAMLEVFRQKI-AG--VDRKVQVVQADARAIPLPDESVHGV 108 (263)
T ss_dssp CSSSCCEEEEETCTT-STTHHHHHT---TTCEEEEEESCHHHHHHHHHHT-TT--SCTTEEEEESCTTSCCSCTTCEEEE
T ss_pred CCCCCCEEEEeCCcC-CHHHHHHHH---CCCEEEEEECCHHHHHHHHHHh-hc--cCCceEEEEcccccCCCCCCCeeEE
Confidence 346789999999997 556677887 4789999999999999999987 22 2378999999998776555679999
Q ss_pred ehhhhccCChhHHHHHHHHHHhhccCCcEEEEe
Q 042119 207 FLAALVGMSKEEKLTILGHIRKYMKDGGILLVR 239 (286)
Q Consensus 207 ~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r 239 (286)
+.....++ .++..++++++.+.|+|||.+++.
T Consensus 109 ~~~~~l~~-~~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 109 IVVHLWHL-VPDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp EEESCGGG-CTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred EECCchhh-cCCHHHHHHHHHHHCCCCcEEEEE
Confidence 97654432 236678999999999999999886
No 101
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.45 E-value=5.4e-13 Score=119.90 Aligned_cols=109 Identities=17% Similarity=0.153 Sum_probs=90.3
Q ss_pred CCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceee
Q 042119 128 VVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIF 207 (286)
Q Consensus 128 ~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~ 207 (286)
+.++.+|||||||+ |.-++.+|+ ..+..+|+++|+|+.+++.|+++++..| +.++|++.++|+.+...+...||+|+
T Consensus 19 v~~g~~VlDIGtGs-G~l~i~la~-~~~~~~V~avDi~~~al~~A~~N~~~~g-l~~~I~v~~gD~l~~~~~~~~~D~Iv 95 (244)
T 3gnl_A 19 ITKNERIADIGSDH-AYLPCFAVK-NQTASFAIAGEVVDGPFQSAQKQVRSSG-LTEQIDVRKGNGLAVIEKKDAIDTIV 95 (244)
T ss_dssp CCSSEEEEEETCST-THHHHHHHH-TTSEEEEEEEESSHHHHHHHHHHHHHTT-CTTTEEEEECSGGGGCCGGGCCCEEE
T ss_pred CCCCCEEEEECCcc-HHHHHHHHH-hCCCCEEEEEECCHHHHHHHHHHHHHcC-CCceEEEEecchhhccCccccccEEE
Confidence 46779999999997 566788888 3567799999999999999999999999 78899999999987654323599998
Q ss_pred hhhhccCChhHHHHHHHHHHhhccCCcEEEEeecC
Q 042119 208 LAALVGMSKEEKLTILGHIRKYMKDGGILLVRSAK 242 (286)
Q Consensus 208 ~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~~~ 242 (286)
++. |-.+--.++++...+++++++.+|+..-.
T Consensus 96 iag---mGg~lI~~IL~~~~~~L~~~~~lIlq~~~ 127 (244)
T 3gnl_A 96 IAG---MGGTLIRTILEEGAAKLAGVTKLILQPNI 127 (244)
T ss_dssp EEE---ECHHHHHHHHHHTGGGGTTCCEEEEEESS
T ss_pred EeC---CchHHHHHHHHHHHHHhCCCCEEEEEcCC
Confidence 753 33455678999999999999999998643
No 102
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.44 E-value=9.4e-13 Score=122.57 Aligned_cols=153 Identities=14% Similarity=0.168 Sum_probs=107.5
Q ss_pred cCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcce
Q 042119 126 NGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDC 205 (286)
Q Consensus 126 ~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~ 205 (286)
....++.+|||||||+ |..+..+++ ..++.+++++|+ +++++.|++.+...| +.++++|+++|+.+. .+ .+||+
T Consensus 179 ~~~~~~~~vLDvG~G~-G~~~~~l~~-~~~~~~~~~~D~-~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~-~~-~~~D~ 252 (360)
T 1tw3_A 179 YDWTNVRHVLDVGGGK-GGFAAAIAR-RAPHVSATVLEM-AGTVDTARSYLKDEG-LSDRVDVVEGDFFEP-LP-RKADA 252 (360)
T ss_dssp SCCTTCSEEEEETCTT-SHHHHHHHH-HCTTCEEEEEEC-TTHHHHHHHHHHHTT-CTTTEEEEECCTTSC-CS-SCEEE
T ss_pred CCCccCcEEEEeCCcC-cHHHHHHHH-hCCCCEEEEecC-HHHHHHHHHHHHhcC-CCCceEEEeCCCCCC-CC-CCccE
Confidence 3456789999999997 555677777 468899999999 999999999999988 677999999998651 11 25999
Q ss_pred eehhhhc-cCChhHHHHHHHHHHhhccCCcEEEEeecC--c--c----eee---------ecccCCcccc------cCcE
Q 042119 206 IFLAALV-GMSKEEKLTILGHIRKYMKDGGILLVRSAK--G--A----RAF---------LYPVVVEHDL------LDFE 261 (286)
Q Consensus 206 V~~aalv-g~~~~~k~~vl~~l~~~l~pgg~lv~r~~~--g--~----r~~---------lyp~v~~~~l------~gf~ 261 (286)
|+....+ .++.++..++++++.+.|+|||.+++.+.. . . ..+ .......+++ .||+
T Consensus 253 v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~ 332 (360)
T 1tw3_A 253 IILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLRMLVFLGGALRTREKWDGLAASAGLV 332 (360)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEE
T ss_pred EEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhccHHHhhhcCCcCCCHHHHHHHHHHCCCe
Confidence 9876544 455555578999999999999998886532 1 0 000 0011122221 5999
Q ss_pred EEEEecCcc---cceeeeEEEeecCC
Q 042119 262 VLSAVHPND---DVINSVVLVRNSQG 284 (286)
Q Consensus 262 ~~~~~~P~~---~vinsvi~~r~~~~ 284 (286)
+..+....+ ....++|.+||+.|
T Consensus 333 ~~~~~~~~~~~~~~~~~~i~~~~~~~ 358 (360)
T 1tw3_A 333 VEEVRQLPSPTIPYDLSLLVLAPAAT 358 (360)
T ss_dssp EEEEEEEECSSSSCEEEEEEEEEC--
T ss_pred EEEEEeCCCCcccCccEEEEEEeCCC
Confidence 876554322 23468999999754
No 103
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.44 E-value=3.4e-13 Score=120.47 Aligned_cols=118 Identities=14% Similarity=0.164 Sum_probs=92.2
Q ss_pred hhhHHHHHHHHhcCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccc
Q 042119 114 KLSKLEYTILSENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDI 193 (286)
Q Consensus 114 ~l~~~E~~~l~~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~ 193 (286)
+|+..-...+....+++|++||++|||+ |.++..+|+...++++|+++|+++++++.+++.+++.+ ++..+.+|+
T Consensus 61 klaa~i~~gl~~l~ikpG~~VldlG~G~-G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~----ni~~V~~d~ 135 (233)
T 4df3_A 61 KLAAALLKGLIELPVKEGDRILYLGIAS-GTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRR----NIFPILGDA 135 (233)
T ss_dssp HHHHHHHTTCSCCCCCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCT----TEEEEESCT
T ss_pred HHHHHHHhchhhcCCCCCCEEEEecCcC-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhc----CeeEEEEec
Confidence 4444333444455679999999999996 88888999866789999999999999999999876554 689999998
Q ss_pred cchhh---cCCCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEe
Q 042119 194 MEVKE---QLGEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVR 239 (286)
Q Consensus 194 ~~~~~---~l~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r 239 (286)
.+... ....+|+||.+.. ..+++..++.++.+.|||||.+++.
T Consensus 136 ~~p~~~~~~~~~vDvVf~d~~---~~~~~~~~l~~~~r~LKpGG~lvI~ 181 (233)
T 4df3_A 136 RFPEKYRHLVEGVDGLYADVA---QPEQAAIVVRNARFFLRDGGYMLMA 181 (233)
T ss_dssp TCGGGGTTTCCCEEEEEECCC---CTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCccccccccceEEEEEEecc---CChhHHHHHHHHHHhccCCCEEEEE
Confidence 76432 2346999985432 2357788999999999999998875
No 104
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.44 E-value=2.9e-13 Score=128.01 Aligned_cols=111 Identities=18% Similarity=0.239 Sum_probs=89.1
Q ss_pred CCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhc-----C-CCCCCeEEEEccccch-----
Q 042119 128 VVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASD-----A-EFEGRMKFLTRDIMEV----- 196 (286)
Q Consensus 128 ~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~-----g-~l~~~i~f~~~D~~~~----- 196 (286)
..++.+|||||||+ |..++.+++...++++|+|+|+|+++++.|++.++.. | ....+++|+++|+.++
T Consensus 81 ~~~~~~VLDlGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~ 159 (383)
T 4fsd_A 81 SLEGATVLDLGCGT-GRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEP 159 (383)
T ss_dssp GGTTCEEEEESCTT-SHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBS
T ss_pred CCCCCEEEEecCcc-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhccc
Confidence 35789999999996 6677778874347899999999999999999998765 3 1226899999999876
Q ss_pred -hhcCCCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 197 -KEQLGEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 197 -~~~l~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
+...+.||+|+....+.+ .+++..+++++.+.|||||.+++.+
T Consensus 160 ~~~~~~~fD~V~~~~~l~~-~~d~~~~l~~~~r~LkpgG~l~i~~ 203 (383)
T 4fsd_A 160 EGVPDSSVDIVISNCVCNL-STNKLALFKEIHRVLRDGGELYFSD 203 (383)
T ss_dssp CCCCTTCEEEEEEESCGGG-CSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCCCCEEEEEEccchhc-CCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 444457999996654432 2467899999999999999999975
No 105
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.44 E-value=8e-13 Score=119.04 Aligned_cols=108 Identities=13% Similarity=0.178 Sum_probs=85.2
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCC--CCCCeEEEEccccchh---hcCCCc
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAE--FEGRMKFLTRDIMEVK---EQLGEY 203 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~--l~~~i~f~~~D~~~~~---~~l~~f 203 (286)
.++.+|||||||+ |..++.+++ .|.+|+|+|+|+++++.|++.....+. ...++.+..+|+.+++ ...+.|
T Consensus 56 ~~~~~vLDiGcG~-G~~~~~l~~---~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~f 131 (293)
T 3thr_A 56 HGCHRVLDVACGT-GVDSIMLVE---EGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGF 131 (293)
T ss_dssp TTCCEEEETTCTT-SHHHHHHHH---TTCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCE
T ss_pred cCCCEEEEecCCC-CHHHHHHHH---CCCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCCe
Confidence 4678999999996 667788888 478999999999999999998755431 0147899999998877 344689
Q ss_pred ceeehh--hhccCCh-----hHHHHHHHHHHhhccCCcEEEEee
Q 042119 204 DCIFLA--ALVGMSK-----EEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 204 D~V~~a--alvg~~~-----~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
|+|+.. .+..+.. ++..++++++.+.|||||.+++..
T Consensus 132 D~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (293)
T 3thr_A 132 DAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDH 175 (293)
T ss_dssp EEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 999864 2323322 458899999999999999999864
No 106
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.44 E-value=1.2e-13 Score=128.47 Aligned_cols=145 Identities=14% Similarity=0.218 Sum_probs=100.6
Q ss_pred CCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcC--CCcceeeh
Q 042119 131 PKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQL--GEYDCIFL 208 (286)
Q Consensus 131 ~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l--~~fD~V~~ 208 (286)
+.+||+||||. |..+..+++ .+++.+|++||+|+++++.||+.+...+ ..+++++++|+.+..... +.||+|+.
T Consensus 90 ~~rVLdIG~G~-G~la~~la~-~~p~~~v~~VEidp~vi~~Ar~~~~~~~--~~rv~v~~~Da~~~l~~~~~~~fDvIi~ 165 (317)
T 3gjy_A 90 KLRITHLGGGA-CTMARYFAD-VYPQSRNTVVELDAELARLSREWFDIPR--APRVKIRVDDARMVAESFTPASRDVIIR 165 (317)
T ss_dssp GCEEEEESCGG-GHHHHHHHH-HSTTCEEEEEESCHHHHHHHHHHSCCCC--TTTEEEEESCHHHHHHTCCTTCEEEEEE
T ss_pred CCEEEEEECCc-CHHHHHHHH-HCCCcEEEEEECCHHHHHHHHHhccccC--CCceEEEECcHHHHHhhccCCCCCEEEE
Confidence 34999999995 677777877 4689999999999999999999865332 378999999998876543 47999998
Q ss_pred hhhccCChhH---HHHHHHHHHhhccCCcEEEEeecCcceeeecccCC--cccc-cCcEEEEEec-C----cccceeeeE
Q 042119 209 AALVGMSKEE---KLTILGHIRKYMKDGGILLVRSAKGARAFLYPVVV--EHDL-LDFEVLSAVH-P----NDDVINSVV 277 (286)
Q Consensus 209 aalvg~~~~~---k~~vl~~l~~~l~pgg~lv~r~~~g~r~~lyp~v~--~~~l-~gf~~~~~~~-P----~~~vinsvi 277 (286)
+..-+..... ..++++.+++.|+|||++++....+.. ++.+. ...+ .-|..+..++ | ..+--|.|+
T Consensus 166 D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~~~~~---~~~~~~~~~tL~~vF~~v~~~~~~~~~~g~~~gN~Vl 242 (317)
T 3gjy_A 166 DVFAGAITPQNFTTVEFFEHCHRGLAPGGLYVANCGDHSD---LRGAKSELAGMMEVFEHVAVIADPPMLKGRRYGNIIL 242 (317)
T ss_dssp CCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEEECTT---CHHHHHHHHHHHHHCSEEEEEECHHHHTTSSCEEEEE
T ss_pred CCCCccccchhhhHHHHHHHHHHhcCCCcEEEEEecCCcc---hHHHHHHHHHHHHHCCceEEEEecCCCCCCcCceEEE
Confidence 7543221111 257999999999999999988643211 00000 0111 2354443333 2 225669999
Q ss_pred EEeec
Q 042119 278 LVRNS 282 (286)
Q Consensus 278 ~~r~~ 282 (286)
+|.+.
T Consensus 243 ~As~~ 247 (317)
T 3gjy_A 243 MGSDT 247 (317)
T ss_dssp EEESS
T ss_pred EEECC
Confidence 99874
No 107
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.44 E-value=5.4e-14 Score=119.80 Aligned_cols=149 Identities=12% Similarity=0.065 Sum_probs=79.9
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhc----CCCcc
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQ----LGEYD 204 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~----l~~fD 204 (286)
.++.+|||+|||+ |..++.+++ ..++++|+++|+|+++++.|++.+...| . +++|+++|+.+...+ .+.||
T Consensus 29 ~~~~~vLDiG~G~-G~~~~~l~~-~~~~~~v~~vD~~~~~~~~a~~~~~~~~-~--~~~~~~~d~~~~~~~~~~~~~~fD 103 (215)
T 4dzr_A 29 PSGTRVIDVGTGS-GCIAVSIAL-ACPGVSVTAVDLSMDALAVARRNAERFG-A--VVDWAAADGIEWLIERAERGRPWH 103 (215)
T ss_dssp CTTEEEEEEESSB-CHHHHHHHH-HCTTEEEEEEECC----------------------CCHHHHHHHHHHHHHTTCCBS
T ss_pred CCCCEEEEecCCH-hHHHHHHHH-hCCCCeEEEEECCHHHHHHHHHHHHHhC-C--ceEEEEcchHhhhhhhhhccCccc
Confidence 6789999999996 666677777 4678999999999999999999999888 4 899999999873332 26899
Q ss_pred eeehhhh------c-cCChhH------------------HHHHHHHHHhhccCCcE-EEEeecCcceeeecccCCccccc
Q 042119 205 CIFLAAL------V-GMSKEE------------------KLTILGHIRKYMKDGGI-LLVRSAKGARAFLYPVVVEHDLL 258 (286)
Q Consensus 205 ~V~~aal------v-g~~~~~------------------k~~vl~~l~~~l~pgg~-lv~r~~~g~r~~lyp~v~~~~l~ 258 (286)
+|+...- . .++.+. ..++++++.+.|+|||+ +++.....-..-+-.....- -.
T Consensus 104 ~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~l~~~-~~ 182 (215)
T 4dzr_A 104 AIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGHNQADEVARLFAPW-RE 182 (215)
T ss_dssp EEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECTTSCHHHHHHHTGGG-GG
T ss_pred EEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEECCccHHHHHHHHHHh-hc
Confidence 9987310 0 111111 16799999999999999 55543321101000000100 14
Q ss_pred CcEEEEEecCcccceeeeEEEeecCC
Q 042119 259 DFEVLSAVHPNDDVINSVVLVRNSQG 284 (286)
Q Consensus 259 gf~~~~~~~P~~~vinsvi~~r~~~~ 284 (286)
||..+........- ..+++++|+.+
T Consensus 183 gf~~~~~~~~~~~~-~r~~~~~~~~~ 207 (215)
T 4dzr_A 183 RGFRVRKVKDLRGI-DRVIAVTREPG 207 (215)
T ss_dssp GTEECCEEECTTSC-EEEEEEEECC-
T ss_pred CCceEEEEEecCCC-EEEEEEEEcCC
Confidence 67665444433222 56788887543
No 108
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.43 E-value=7.3e-13 Score=123.76 Aligned_cols=105 Identities=22% Similarity=0.250 Sum_probs=84.9
Q ss_pred CCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceee
Q 042119 128 VVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIF 207 (286)
Q Consensus 128 ~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~ 207 (286)
..++++|||||||+ |..++.+|++ ...+|+|+|+|+ +++.|++.++..| +.++++++++|+.+++.+.+.||+|+
T Consensus 62 ~~~~~~VLDiGcGt-G~ls~~la~~--g~~~v~gvD~s~-~~~~a~~~~~~~~-~~~~i~~~~~d~~~~~~~~~~~D~Iv 136 (340)
T 2fyt_A 62 IFKDKVVLDVGCGT-GILSMFAAKA--GAKKVLGVDQSE-ILYQAMDIIRLNK-LEDTITLIKGKIEEVHLPVEKVDVII 136 (340)
T ss_dssp GTTTCEEEEETCTT-SHHHHHHHHT--TCSEEEEEESST-HHHHHHHHHHHTT-CTTTEEEEESCTTTSCCSCSCEEEEE
T ss_pred hcCCCEEEEeeccC-cHHHHHHHHc--CCCEEEEEChHH-HHHHHHHHHHHcC-CCCcEEEEEeeHHHhcCCCCcEEEEE
Confidence 46789999999997 5566778872 345999999997 9999999999999 78899999999988765546799998
Q ss_pred hhhh--ccCChhHHHHHHHHHHhhccCCcEEE
Q 042119 208 LAAL--VGMSKEEKLTILGHIRKYMKDGGILL 237 (286)
Q Consensus 208 ~aal--vg~~~~~k~~vl~~l~~~l~pgg~lv 237 (286)
...+ ..........++..+.+.|||||+++
T Consensus 137 s~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 137 SEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp ECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred EcCchhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 5431 11233456789999999999999998
No 109
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.43 E-value=6.7e-13 Score=125.62 Aligned_cols=106 Identities=14% Similarity=0.227 Sum_probs=87.1
Q ss_pred CCCCCEEEEeccCCChhhHHHHHhhcCCCc-EEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCccee
Q 042119 128 VVQPKKVAFVGSGPMPLTSIIMAKHHLTST-HFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCI 206 (286)
Q Consensus 128 ~~~~~~VL~IG~G~lp~tai~lA~~~~~g~-~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V 206 (286)
..++++|||||||+ |..++.+|+ .|+ +|+|+|+| ++++.|++.++..| +.++++|+++|+.++..+ +.||+|
T Consensus 61 ~~~~~~VLDlGcGt-G~ls~~la~---~g~~~V~gvD~s-~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~~~~-~~~D~I 133 (376)
T 3r0q_C 61 HFEGKTVLDVGTGS-GILAIWSAQ---AGARKVYAVEAT-KMADHARALVKANN-LDHIVEVIEGSVEDISLP-EKVDVI 133 (376)
T ss_dssp TTTTCEEEEESCTT-THHHHHHHH---TTCSEEEEEESS-TTHHHHHHHHHHTT-CTTTEEEEESCGGGCCCS-SCEEEE
T ss_pred cCCCCEEEEeccCc-CHHHHHHHh---cCCCEEEEEccH-HHHHHHHHHHHHcC-CCCeEEEEECchhhcCcC-CcceEE
Confidence 47889999999996 667788888 355 99999999 99999999999999 788999999999887655 689999
Q ss_pred ehhhhc--cCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 207 FLAALV--GMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 207 ~~aalv--g~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
+...+. .........++..+.+.|+|||+++...
T Consensus 134 v~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 134 ISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSH 169 (376)
T ss_dssp EECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSE
T ss_pred EEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEec
Confidence 864321 1122456789999999999999998753
No 110
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.43 E-value=8.5e-13 Score=119.77 Aligned_cols=107 Identities=18% Similarity=0.224 Sum_probs=82.2
Q ss_pred CCCEEEEeccCC--ChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchh----------
Q 042119 130 QPKKVAFVGSGP--MPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVK---------- 197 (286)
Q Consensus 130 ~~~~VL~IG~G~--lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~---------- 197 (286)
...+|||||||+ .|..+..+++ ..++++|+++|+||.+++.|++.+.. ..+++|+++|+.+..
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~-~~p~~~v~~vD~sp~~l~~Ar~~~~~----~~~v~~~~~D~~~~~~~~~~~~~~~ 151 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQS-VNPDARVVYVDIDPMVLTHGRALLAK----DPNTAVFTADVRDPEYILNHPDVRR 151 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHH-HCTTCEEEEEESSHHHHHHHHHHHTT----CTTEEEEECCTTCHHHHHHSHHHHH
T ss_pred CCCEEEEECCCCCCCChHHHHHHH-hCCCCEEEEEECChHHHHHHHHhcCC----CCCeEEEEeeCCCchhhhccchhhc
Confidence 458999999995 0344444444 46899999999999999999998742 258999999997632
Q ss_pred -hcCCCcceeehhhhc-cCChhHHHHHHHHHHhhccCCcEEEEeec
Q 042119 198 -EQLGEYDCIFLAALV-GMSKEEKLTILGHIRKYMKDGGILLVRSA 241 (286)
Q Consensus 198 -~~l~~fD~V~~aalv-g~~~~~k~~vl~~l~~~l~pgg~lv~r~~ 241 (286)
.+++.||+|+....+ .++.++...+++++++.|+|||.|++...
T Consensus 152 ~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~ 197 (274)
T 2qe6_A 152 MIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSL 197 (274)
T ss_dssp HCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred cCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEe
Confidence 233579999866544 34444578999999999999999998763
No 111
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=99.43 E-value=5.7e-13 Score=116.59 Aligned_cols=100 Identities=14% Similarity=0.164 Sum_probs=83.3
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCC--CCCeEEEEccccch----------
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEF--EGRMKFLTRDIMEV---------- 196 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l--~~~i~f~~~D~~~~---------- 196 (286)
.++++||+|||| +|++++|+ .++++|++||.|++..+.|++.+++.| + .++|+++.||+.+.
T Consensus 29 ~~a~~VLEiGtG---ySTl~lA~--~~~g~VvtvE~d~~~~~~ar~~l~~~g-~~~~~~I~~~~gda~~~~~wg~p~~~~ 102 (202)
T 3cvo_A 29 EEAEVILEYGSG---GSTVVAAE--LPGKHVTSVESDRAWARMMKAWLAANP-PAEGTEVNIVWTDIGPTGDWGHPVSDA 102 (202)
T ss_dssp HHCSEEEEESCS---HHHHHHHT--STTCEEEEEESCHHHHHHHHHHHHHSC-CCTTCEEEEEECCCSSBCGGGCBSSST
T ss_pred hCCCEEEEECch---HHHHHHHH--cCCCEEEEEeCCHHHHHHHHHHHHHcC-CCCCCceEEEEeCchhhhcccccccch
Confidence 467999999996 69999998 348999999999999999999999999 7 78999999997543
Q ss_pred -----hh---------cCCCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 197 -----KE---------QLGEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 197 -----~~---------~l~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
+. ..+.||+||+++-. . ...+....+.|+|||+|++.+
T Consensus 103 ~~~~l~~~~~~i~~~~~~~~fDlIfIDg~k----~--~~~~~~~l~~l~~GG~Iv~DN 154 (202)
T 3cvo_A 103 KWRSYPDYPLAVWRTEGFRHPDVVLVDGRF----R--VGCALATAFSITRPVTLLFDD 154 (202)
T ss_dssp TGGGTTHHHHGGGGCTTCCCCSEEEECSSS----H--HHHHHHHHHHCSSCEEEEETT
T ss_pred hhhhHHHHhhhhhccccCCCCCEEEEeCCC----c--hhHHHHHHHhcCCCeEEEEeC
Confidence 10 12469999999642 2 356777889999999999986
No 112
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.43 E-value=1.1e-12 Score=116.45 Aligned_cols=109 Identities=15% Similarity=0.157 Sum_probs=81.5
Q ss_pred CCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHh------cCCCCCCeEEEEccccc-hh--h
Q 042119 128 VVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVAS------DAEFEGRMKFLTRDIME-VK--E 198 (286)
Q Consensus 128 ~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~------~g~l~~~i~f~~~D~~~-~~--~ 198 (286)
..++.+|||||||. |..++.+|+ ..++..|+|||+|+.+++.|++.+++ .+ ..+++|+++|+.+ ++ .
T Consensus 44 ~~~~~~vLDiGcG~-G~~~~~la~-~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~--~~nv~~~~~d~~~~l~~~~ 119 (235)
T 3ckk_A 44 AQAQVEFADIGCGY-GGLLVELSP-LFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGG--FQNIACLRSNAMKHLPNFF 119 (235)
T ss_dssp --CCEEEEEETCTT-CHHHHHHGG-GSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCC--CTTEEEEECCTTTCHHHHC
T ss_pred cCCCCeEEEEccCC-cHHHHHHHH-HCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcC--CCeEEEEECcHHHhhhhhC
Confidence 35678999999996 666778887 47899999999999999999998765 34 2689999999987 44 2
Q ss_pred cCCCcceeehhhhccCCh--hHH-----HHHHHHHHhhccCCcEEEEee
Q 042119 199 QLGEYDCIFLAALVGMSK--EEK-----LTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 199 ~l~~fD~V~~aalvg~~~--~~k-----~~vl~~l~~~l~pgg~lv~r~ 240 (286)
+.+.||.|++...-.+.+ ..| ..+++++.+.|+|||.+++.+
T Consensus 120 ~~~~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~t 168 (235)
T 3ckk_A 120 YKGQLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTIT 168 (235)
T ss_dssp CTTCEEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCcCeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEe
Confidence 345799998542111110 011 369999999999999999875
No 113
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.43 E-value=2.8e-12 Score=114.36 Aligned_cols=147 Identities=14% Similarity=0.149 Sum_probs=95.4
Q ss_pred cCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhh--c-CCC
Q 042119 126 NGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKE--Q-LGE 202 (286)
Q Consensus 126 ~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~--~-l~~ 202 (286)
..++++.+|||+||||++ .+..+|+...++++|+++|+++.+++...+.+++. .++.++++|+.+... . .+.
T Consensus 72 ~~l~~g~~VLDlG~GtG~-~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r----~nv~~i~~Da~~~~~~~~~~~~ 146 (232)
T 3id6_C 72 NPIRKGTKVLYLGAASGT-TISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR----PNIFPLLADARFPQSYKSVVEN 146 (232)
T ss_dssp CSCCTTCEEEEETCTTSH-HHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC----TTEEEEECCTTCGGGTTTTCCC
T ss_pred cCCCCCCEEEEEeecCCH-HHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc----CCeEEEEcccccchhhhccccc
Confidence 346899999999999855 55667764557889999999999976655554442 479999999976432 1 247
Q ss_pred cceeehhhhccCChhHHHHHH-HHHHhhccCCcEEEEeecCcc-eeeeccc--CCc--ccc--cCcEEEEEec--Ccccc
Q 042119 203 YDCIFLAALVGMSKEEKLTIL-GHIRKYMKDGGILLVRSAKGA-RAFLYPV--VVE--HDL--LDFEVLSAVH--PNDDV 272 (286)
Q Consensus 203 fD~V~~aalvg~~~~~k~~vl-~~l~~~l~pgg~lv~r~~~g~-r~~lyp~--v~~--~~l--~gf~~~~~~~--P~~~v 272 (286)
||+||.+... ++..+++ ..+.+.|||||.+++.-..+. ..-..|. ++. ..+ .||+++.+.. |..+
T Consensus 147 ~D~I~~d~a~----~~~~~il~~~~~~~LkpGG~lvisik~~~~d~t~~~~e~~~~~~~~L~~~gf~~~~~~~l~p~~~- 221 (232)
T 3id6_C 147 VDVLYVDIAQ----PDQTDIAIYNAKFFLKVNGDMLLVIKARSIDVTKDPKEIYKTEVEKLENSNFETIQIINLDPYDK- 221 (232)
T ss_dssp EEEEEECCCC----TTHHHHHHHHHHHHEEEEEEEEEEEC-------CCSSSSTTHHHHHHHHTTEEEEEEEECTTTCS-
T ss_pred eEEEEecCCC----hhHHHHHHHHHHHhCCCCeEEEEEEccCCcccCCCHHHHHHHHHHHHHHCCCEEEEEeccCCCcC-
Confidence 9999976432 3333444 555669999999998632211 0011121 111 112 4899987665 5544
Q ss_pred eeeeEEEeec
Q 042119 273 INSVVLVRNS 282 (286)
Q Consensus 273 insvi~~r~~ 282 (286)
....|++|++
T Consensus 222 ~h~~v~~~~~ 231 (232)
T 3id6_C 222 DHAIVLSKYK 231 (232)
T ss_dssp SCEEEEEEEC
T ss_pred ceEEEEEEeC
Confidence 4568888875
No 114
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.42 E-value=1e-12 Score=114.56 Aligned_cols=102 Identities=19% Similarity=0.330 Sum_probs=83.9
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeeh
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFL 208 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~ 208 (286)
.++.+||+||||+ |..+..+++ . .+|+++|+|+++++.|++.+...+ .+++++++|+.+.+.+ +.||+|+.
T Consensus 32 ~~~~~vLdiG~G~-G~~~~~l~~---~-~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~~d~~~~~~~-~~fD~v~~ 102 (243)
T 3d2l_A 32 EPGKRIADIGCGT-GTATLLLAD---H-YEVTGVDLSEEMLEIAQEKAMETN---RHVDFWVQDMRELELP-EPVDAITI 102 (243)
T ss_dssp CTTCEEEEESCTT-CHHHHHHTT---T-SEEEEEESCHHHHHHHHHHHHHTT---CCCEEEECCGGGCCCS-SCEEEEEE
T ss_pred CCCCeEEEecCCC-CHHHHHHhh---C-CeEEEEECCHHHHHHHHHhhhhcC---CceEEEEcChhhcCCC-CCcCEEEE
Confidence 4678999999997 566677777 3 899999999999999999988876 4799999999876554 67999986
Q ss_pred hh--hccC-ChhHHHHHHHHHHhhccCCcEEEEe
Q 042119 209 AA--LVGM-SKEEKLTILGHIRKYMKDGGILLVR 239 (286)
Q Consensus 209 aa--lvg~-~~~~k~~vl~~l~~~l~pgg~lv~r 239 (286)
.. +-.+ +.++..++++++.+.|+|||.+++.
T Consensus 103 ~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 136 (243)
T 3d2l_A 103 LCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFD 136 (243)
T ss_dssp CTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred eCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 43 2222 4567788999999999999999984
No 115
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.42 E-value=6e-13 Score=111.19 Aligned_cols=108 Identities=12% Similarity=0.163 Sum_probs=85.5
Q ss_pred CCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhh-cCCCccee
Q 042119 128 VVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKE-QLGEYDCI 206 (286)
Q Consensus 128 ~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~-~l~~fD~V 206 (286)
..++.+|||+|||+ |..++.++++ +..+|+++|+|+++++.|++.++..| +.++++|+++|+.+... ..+.||+|
T Consensus 29 ~~~~~~vLDlGcG~-G~~~~~l~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~fD~i 104 (177)
T 2esr_A 29 YFNGGRVLDLFAGS-GGLAIEAVSR--GMSAAVLVEKNRKAQAIIQDNIIMTK-AENRFTLLKMEAERAIDCLTGRFDLV 104 (177)
T ss_dssp CCCSCEEEEETCTT-CHHHHHHHHT--TCCEEEEECCCHHHHHHHHHHHHTTT-CGGGEEEECSCHHHHHHHBCSCEEEE
T ss_pred hcCCCeEEEeCCCC-CHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHHHHcC-CCCceEEEECcHHHhHHhhcCCCCEE
Confidence 35788999999996 5666777772 55799999999999999999999998 67789999999987433 23469999
Q ss_pred ehhhhccCChhHHHHHHHHHH--hhccCCcEEEEeec
Q 042119 207 FLAALVGMSKEEKLTILGHIR--KYMKDGGILLVRSA 241 (286)
Q Consensus 207 ~~aalvg~~~~~k~~vl~~l~--~~l~pgg~lv~r~~ 241 (286)
+..... ......++++.+. +.|+|||++++...
T Consensus 105 ~~~~~~--~~~~~~~~~~~l~~~~~L~~gG~l~~~~~ 139 (177)
T 2esr_A 105 FLDPPY--AKETIVATIEALAAKNLLSEQVMVVCETD 139 (177)
T ss_dssp EECCSS--HHHHHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred EECCCC--CcchHHHHHHHHHhCCCcCCCcEEEEEEC
Confidence 975321 1245567788887 99999999999764
No 116
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.42 E-value=7.2e-13 Score=113.44 Aligned_cols=102 Identities=21% Similarity=0.309 Sum_probs=84.3
Q ss_pred CCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceee
Q 042119 128 VVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIF 207 (286)
Q Consensus 128 ~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~ 207 (286)
..++.+|||||||+ |..++.+++ .+..+|+++|+|+++++.|++.+...| +.+ +++.++|+.+.. .+.||+|+
T Consensus 58 ~~~~~~vLDiG~G~-G~~~~~l~~--~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~-v~~~~~d~~~~~--~~~fD~i~ 130 (205)
T 3grz_A 58 MVKPLTVADVGTGS-GILAIAAHK--LGAKSVLATDISDESMTAAEENAALNG-IYD-IALQKTSLLADV--DGKFDLIV 130 (205)
T ss_dssp CSSCCEEEEETCTT-SHHHHHHHH--TTCSEEEEEESCHHHHHHHHHHHHHTT-CCC-CEEEESSTTTTC--CSCEEEEE
T ss_pred ccCCCEEEEECCCC-CHHHHHHHH--CCCCEEEEEECCHHHHHHHHHHHHHcC-CCc-eEEEeccccccC--CCCceEEE
Confidence 46789999999997 566677887 355699999999999999999999988 444 999999997643 26899998
Q ss_pred hhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 208 LAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 208 ~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
..... +...++++++.+.|+|||.+++..
T Consensus 131 ~~~~~----~~~~~~l~~~~~~L~~gG~l~~~~ 159 (205)
T 3grz_A 131 ANILA----EILLDLIPQLDSHLNEDGQVIFSG 159 (205)
T ss_dssp EESCH----HHHHHHGGGSGGGEEEEEEEEEEE
T ss_pred ECCcH----HHHHHHHHHHHHhcCCCCEEEEEe
Confidence 76433 456789999999999999999864
No 117
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.42 E-value=1e-12 Score=115.44 Aligned_cols=109 Identities=11% Similarity=0.091 Sum_probs=86.8
Q ss_pred hcCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcc
Q 042119 125 ENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYD 204 (286)
Q Consensus 125 ~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD 204 (286)
.....++.+|||||||+ |..+..++++ ...+|+++|+|+.+++.|++.+... .+++|+++|+.+++...+.||
T Consensus 88 ~l~~~~~~~vLDiG~G~-G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~d~~~~~~~~~~fD 160 (254)
T 1xtp_A 88 SLPGHGTSRALDCGAGI-GRITKNLLTK--LYATTDLLEPVKHMLEEAKRELAGM----PVGKFILASMETATLPPNTYD 160 (254)
T ss_dssp TSTTCCCSEEEEETCTT-THHHHHTHHH--HCSEEEEEESCHHHHHHHHHHTTTS----SEEEEEESCGGGCCCCSSCEE
T ss_pred hhcccCCCEEEEECCCc-CHHHHHHHHh--hcCEEEEEeCCHHHHHHHHHHhccC----CceEEEEccHHHCCCCCCCeE
Confidence 34456789999999997 5566677763 2568999999999999999985542 479999999988665556899
Q ss_pred eeehhhhc-cCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 205 CIFLAALV-GMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 205 ~V~~aalv-g~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
+|+....+ ..+.++..++++++.+.|+|||.+++..
T Consensus 161 ~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 197 (254)
T 1xtp_A 161 LIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKE 197 (254)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 99876543 4444677899999999999999999976
No 118
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.42 E-value=1.9e-12 Score=121.77 Aligned_cols=111 Identities=15% Similarity=0.204 Sum_probs=91.3
Q ss_pred HhcCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCc
Q 042119 124 SENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEY 203 (286)
Q Consensus 124 ~~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~f 203 (286)
......++.+|+|||||+ |..+..+++ .+|+.+++++|+ |++++.|++.+...| +.++|+|+.+|..+ +.+ .+|
T Consensus 196 ~~~~~~~~~~vlDvG~G~-G~~~~~l~~-~~p~~~~~~~D~-~~~~~~a~~~~~~~~-l~~~v~~~~~d~~~-~~p-~~~ 269 (369)
T 3gwz_A 196 AAYDFSGAATAVDIGGGR-GSLMAAVLD-AFPGLRGTLLER-PPVAEEARELLTGRG-LADRCEILPGDFFE-TIP-DGA 269 (369)
T ss_dssp HHSCCTTCSEEEEETCTT-SHHHHHHHH-HCTTCEEEEEEC-HHHHHHHHHHHHHTT-CTTTEEEEECCTTT-CCC-SSC
T ss_pred HhCCCccCcEEEEeCCCc-cHHHHHHHH-HCCCCeEEEEcC-HHHHHHHHHhhhhcC-cCCceEEeccCCCC-CCC-CCc
Confidence 344457789999999997 566677777 488999999999 999999999999998 78899999999863 222 279
Q ss_pred ceeehhhhc-cCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 204 DCIFLAALV-GMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 204 D~V~~aalv-g~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
|+|++...+ .++.+...++++++++.|+|||.+++.+
T Consensus 270 D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e 307 (369)
T 3gwz_A 270 DVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVID 307 (369)
T ss_dssp SEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEE
T ss_pred eEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 999876544 5566666789999999999999999865
No 119
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.42 E-value=8.1e-13 Score=122.64 Aligned_cols=115 Identities=21% Similarity=0.394 Sum_probs=92.8
Q ss_pred HHHhcCCCC-CCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhh-c
Q 042119 122 ILSENGVVQ-PKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKE-Q 199 (286)
Q Consensus 122 ~l~~~~~~~-~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~-~ 199 (286)
.+......+ +.+|||||||+ |..+..+++ .+|+.+++++|+ |++++.|++.+...| +.++++|+.+|..+.+. .
T Consensus 170 ~l~~~~~~~~~~~vlDvG~G~-G~~~~~l~~-~~p~~~~~~~D~-~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~~~~~ 245 (352)
T 3mcz_A 170 VVSELGVFARARTVIDLAGGH-GTYLAQVLR-RHPQLTGQIWDL-PTTRDAARKTIHAHD-LGGRVEFFEKNLLDARNFE 245 (352)
T ss_dssp HHHTCGGGTTCCEEEEETCTT-CHHHHHHHH-HCTTCEEEEEEC-GGGHHHHHHHHHHTT-CGGGEEEEECCTTCGGGGT
T ss_pred HHHhCCCcCCCCEEEEeCCCc-CHHHHHHHH-hCCCCeEEEEEC-HHHHHHHHHHHHhcC-CCCceEEEeCCcccCcccC
Confidence 333444455 89999999997 556667777 478999999999 899999999999988 77899999999977542 2
Q ss_pred CCCcceeehhhhc-cCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 200 LGEYDCIFLAALV-GMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 200 l~~fD~V~~aalv-g~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
.++||+|+..... .++.++..++++++++.|+|||.+++.+
T Consensus 246 ~~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e 287 (352)
T 3mcz_A 246 GGAADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILT 287 (352)
T ss_dssp TCCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCCccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 2469999976544 5566667899999999999999998865
No 120
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.42 E-value=5.1e-13 Score=111.89 Aligned_cols=108 Identities=16% Similarity=0.122 Sum_probs=83.9
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhc----CCCcc
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQ----LGEYD 204 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~----l~~fD 204 (286)
.++.+|||+|||+ |..++.+++ .+..+|+++|+|+++++.|++.++..| +.++++|+++|+.+.... .+.||
T Consensus 43 ~~~~~vLD~GcG~-G~~~~~~~~--~~~~~v~~vD~~~~~~~~a~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~fD 118 (187)
T 2fhp_A 43 FDGGMALDLYSGS-GGLAIEAVS--RGMDKSICIEKNFAALKVIKENIAITK-EPEKFEVRKMDANRALEQFYEEKLQFD 118 (187)
T ss_dssp CSSCEEEETTCTT-CHHHHHHHH--TTCSEEEEEESCHHHHHHHHHHHHHHT-CGGGEEEEESCHHHHHHHHHHTTCCEE
T ss_pred cCCCCEEEeCCcc-CHHHHHHHH--cCCCEEEEEECCHHHHHHHHHHHHHhC-CCcceEEEECcHHHHHHHHHhcCCCCC
Confidence 5778999999997 555566666 255799999999999999999999988 677899999999875432 45799
Q ss_pred eeehhhhccCChhHHHHHHHHH--HhhccCCcEEEEeecC
Q 042119 205 CIFLAALVGMSKEEKLTILGHI--RKYMKDGGILLVRSAK 242 (286)
Q Consensus 205 ~V~~aalvg~~~~~k~~vl~~l--~~~l~pgg~lv~r~~~ 242 (286)
+|+...... .....+++..+ .+.|+|||.+++....
T Consensus 119 ~i~~~~~~~--~~~~~~~~~~l~~~~~L~~gG~l~~~~~~ 156 (187)
T 2fhp_A 119 LVLLDPPYA--KQEIVSQLEKMLERQLLTNEAVIVCETDK 156 (187)
T ss_dssp EEEECCCGG--GCCHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred EEEECCCCC--chhHHHHHHHHHHhcccCCCCEEEEEeCC
Confidence 999753211 12345677777 8889999999987643
No 121
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.41 E-value=2.1e-12 Score=115.27 Aligned_cols=109 Identities=15% Similarity=0.199 Sum_probs=85.7
Q ss_pred CCC-CCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhc--CCCc
Q 042119 127 GVV-QPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQ--LGEY 203 (286)
Q Consensus 127 ~~~-~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~--l~~f 203 (286)
... ++.+|||+|||+ |..++.+|++ ...+|+++|+|+++++.|++++...| +.++++++++|+.+.... .+.|
T Consensus 45 ~~~~~~~~vLDlG~G~-G~~~~~la~~--~~~~v~gvDi~~~~~~~a~~n~~~~~-~~~~v~~~~~D~~~~~~~~~~~~f 120 (259)
T 3lpm_A 45 YLPIRKGKIIDLCSGN-GIIPLLLSTR--TKAKIVGVEIQERLADMAKRSVAYNQ-LEDQIEIIEYDLKKITDLIPKERA 120 (259)
T ss_dssp CCCSSCCEEEETTCTT-THHHHHHHTT--CCCEEEEECCSHHHHHHHHHHHHHTT-CTTTEEEECSCGGGGGGTSCTTCE
T ss_pred cCCCCCCEEEEcCCch-hHHHHHHHHh--cCCcEEEEECCHHHHHHHHHHHHHCC-CcccEEEEECcHHHhhhhhccCCc
Confidence 345 789999999997 5666778873 33499999999999999999999999 788999999999887643 3579
Q ss_pred ceeehhhhc------cC-------------ChhHHHHHHHHHHhhccCCcEEEEe
Q 042119 204 DCIFLAALV------GM-------------SKEEKLTILGHIRKYMKDGGILLVR 239 (286)
Q Consensus 204 D~V~~aalv------g~-------------~~~~k~~vl~~l~~~l~pgg~lv~r 239 (286)
|+|+...-. +. .......+++.+.+.|+|||++++-
T Consensus 121 D~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 175 (259)
T 3lpm_A 121 DIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFV 175 (259)
T ss_dssp EEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEE
Confidence 999873110 00 0123467999999999999999885
No 122
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.41 E-value=2.4e-12 Score=106.86 Aligned_cols=101 Identities=14% Similarity=0.129 Sum_probs=84.3
Q ss_pred cCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcce
Q 042119 126 NGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDC 205 (286)
Q Consensus 126 ~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~ 205 (286)
....++.+|||+|||+ |..++.+++ ++.+|+++|+|+++++.|++.++..| + ++++++++|+.+ ..+.+.||+
T Consensus 31 ~~~~~~~~vLdiG~G~-G~~~~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~~-~-~~~~~~~~d~~~-~~~~~~~D~ 103 (183)
T 2yxd_A 31 LNLNKDDVVVDVGCGS-GGMTVEIAK---RCKFVYAIDYLDGAIEVTKQNLAKFN-I-KNCQIIKGRAED-VLDKLEFNK 103 (183)
T ss_dssp HCCCTTCEEEEESCCC-SHHHHHHHT---TSSEEEEEECSHHHHHHHHHHHHHTT-C-CSEEEEESCHHH-HGGGCCCSE
T ss_pred cCCCCCCEEEEeCCCC-CHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHHcC-C-CcEEEEECCccc-cccCCCCcE
Confidence 3557889999999997 666677877 88999999999999999999999998 4 689999999987 333358999
Q ss_pred eehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 206 IFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 206 V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
|+.... ....++++.+.+. |||.+++..
T Consensus 104 i~~~~~-----~~~~~~l~~~~~~--~gG~l~~~~ 131 (183)
T 2yxd_A 104 AFIGGT-----KNIEKIIEILDKK--KINHIVANT 131 (183)
T ss_dssp EEECSC-----SCHHHHHHHHHHT--TCCEEEEEE
T ss_pred EEECCc-----ccHHHHHHHHhhC--CCCEEEEEe
Confidence 996643 4566799999988 999999876
No 123
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.41 E-value=1.3e-12 Score=116.50 Aligned_cols=116 Identities=15% Similarity=0.044 Sum_probs=87.5
Q ss_pred HHHhcCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChH------HHHHHHHHHHhcCCCCCCeEEEEcc---
Q 042119 122 ILSENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEA------ANDVARSIVASDAEFEGRMKFLTRD--- 192 (286)
Q Consensus 122 ~l~~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~------ai~~Ar~~~~~~g~l~~~i~f~~~D--- 192 (286)
.+....+.++++|||||||+ |..+..++++..++++|+|+|+|++ +++.|++.+...| +.++++|+++|
T Consensus 35 l~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~ 112 (275)
T 3bkx_A 35 IAEAWQVKPGEKILEIGCGQ-GDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGP-LGDRLTVHFNTNLS 112 (275)
T ss_dssp HHHHHTCCTTCEEEEESCTT-SHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTST-TGGGEEEECSCCTT
T ss_pred HHHHcCCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcC-CCCceEEEECChhh
Confidence 44445678899999999997 5666777773235589999999997 9999999999888 67799999998
Q ss_pred ccchhhcCCCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 193 IMEVKEQLGEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 193 ~~~~~~~l~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
..+++...+.||+|+....+.. .++...+++.+.+.++|||.+++.+
T Consensus 113 ~~~~~~~~~~fD~v~~~~~l~~-~~~~~~~~~~~~~l~~~gG~l~~~~ 159 (275)
T 3bkx_A 113 DDLGPIADQHFDRVVLAHSLWY-FASANALALLFKNMAAVCDHVDVAE 159 (275)
T ss_dssp TCCGGGTTCCCSEEEEESCGGG-SSCHHHHHHHHHHHTTTCSEEEEEE
T ss_pred hccCCCCCCCEEEEEEccchhh-CCCHHHHHHHHHHHhCCCCEEEEEE
Confidence 4444444467999986544321 1334457777777777799999864
No 124
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.41 E-value=8.5e-13 Score=113.31 Aligned_cols=101 Identities=17% Similarity=0.221 Sum_probs=83.3
Q ss_pred CCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceee
Q 042119 128 VVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIF 207 (286)
Q Consensus 128 ~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~ 207 (286)
..++.+|||||||+ |..+..+++ .|.+|+|+|+|+++++.|++.+ + ++++++|+.+++ ..+.||+|+
T Consensus 41 ~~~~~~vLDiGcG~-G~~~~~l~~---~~~~v~~vD~s~~~~~~a~~~~---~-----~~~~~~d~~~~~-~~~~fD~v~ 107 (211)
T 3e23_A 41 LPAGAKILELGCGA-GYQAEAMLA---AGFDVDATDGSPELAAEASRRL---G-----RPVRTMLFHQLD-AIDAYDAVW 107 (211)
T ss_dssp SCTTCEEEESSCTT-SHHHHHHHH---TTCEEEEEESCHHHHHHHHHHH---T-----SCCEECCGGGCC-CCSCEEEEE
T ss_pred cCCCCcEEEECCCC-CHHHHHHHH---cCCeEEEECCCHHHHHHHHHhc---C-----CceEEeeeccCC-CCCcEEEEE
Confidence 35788999999996 566777887 4889999999999999999985 3 578899998876 446899999
Q ss_pred hhhhc-cCChhHHHHHHHHHHhhccCCcEEEEeec
Q 042119 208 LAALV-GMSKEEKLTILGHIRKYMKDGGILLVRSA 241 (286)
Q Consensus 208 ~aalv-g~~~~~k~~vl~~l~~~l~pgg~lv~r~~ 241 (286)
....+ .++.++...+++++.+.|+|||++++...
T Consensus 108 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 142 (211)
T 3e23_A 108 AHACLLHVPRDELADVLKLIWRALKPGGLFYASYK 142 (211)
T ss_dssp ECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEEc
Confidence 76543 44556888999999999999999999753
No 125
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.41 E-value=6.6e-13 Score=115.39 Aligned_cols=101 Identities=15% Similarity=0.260 Sum_probs=80.9
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeeh
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFL 208 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~ 208 (286)
.++.+|||||||+ |..+..+++ .+.+|+|+|+|+++++.|++.+ . .+++|+++|+.+.. ..+.||+|+.
T Consensus 41 ~~~~~vLDiGcG~-G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~---~---~~v~~~~~d~~~~~-~~~~fD~v~~ 109 (250)
T 2p7i_A 41 FRPGNLLELGSFK-GDFTSRLQE---HFNDITCVEASEEAISHAQGRL---K---DGITYIHSRFEDAQ-LPRRYDNIVL 109 (250)
T ss_dssp CCSSCEEEESCTT-SHHHHHHTT---TCSCEEEEESCHHHHHHHHHHS---C---SCEEEEESCGGGCC-CSSCEEEEEE
T ss_pred cCCCcEEEECCCC-CHHHHHHHH---hCCcEEEEeCCHHHHHHHHHhh---h---CCeEEEEccHHHcC-cCCcccEEEE
Confidence 4678999999996 666777877 4669999999999999999873 2 27999999998763 3357999997
Q ss_pred hhhccCChhHHHHHHHHHH-hhccCCcEEEEeec
Q 042119 209 AALVGMSKEEKLTILGHIR-KYMKDGGILLVRSA 241 (286)
Q Consensus 209 aalvg~~~~~k~~vl~~l~-~~l~pgg~lv~r~~ 241 (286)
...+.+ .++..++++++. +.|||||.+++...
T Consensus 110 ~~~l~~-~~~~~~~l~~~~~~~LkpgG~l~i~~~ 142 (250)
T 2p7i_A 110 THVLEH-IDDPVALLKRINDDWLAEGGRLFLVCP 142 (250)
T ss_dssp ESCGGG-CSSHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred hhHHHh-hcCHHHHHHHHHHHhcCCCCEEEEEcC
Confidence 654422 245578999999 99999999999763
No 126
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.40 E-value=1.4e-12 Score=122.33 Aligned_cols=147 Identities=19% Similarity=0.207 Sum_probs=106.0
Q ss_pred CCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCccee
Q 042119 127 GVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCI 206 (286)
Q Consensus 127 ~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V 206 (286)
......+|+|||||+ |..++.+++ .+|+.+++.+|. |++++.|++.+...+ .+||+|+.+|..+ .+..++|+|
T Consensus 176 ~~~~~~~v~DvGgG~-G~~~~~l~~-~~p~~~~~~~dl-p~v~~~a~~~~~~~~--~~rv~~~~gD~~~--~~~~~~D~~ 248 (353)
T 4a6d_A 176 DLSVFPLMCDLGGGA-GALAKECMS-LYPGCKITVFDI-PEVVWTAKQHFSFQE--EEQIDFQEGDFFK--DPLPEADLY 248 (353)
T ss_dssp CGGGCSEEEEETCTT-SHHHHHHHH-HCSSCEEEEEEC-HHHHHHHHHHSCC----CCSEEEEESCTTT--SCCCCCSEE
T ss_pred CcccCCeEEeeCCCC-CHHHHHHHH-hCCCceeEeccC-HHHHHHHHHhhhhcc--cCceeeecCcccc--CCCCCceEE
Confidence 346778999999996 666777777 589999999998 899999999876544 5899999999854 345679999
Q ss_pred ehhhhc-cCChhHHHHHHHHHHhhccCCcEEEEeec----Ccc---eeeecc-----cC---C--cc---cc---cCcEE
Q 042119 207 FLAALV-GMSKEEKLTILGHIRKYMKDGGILLVRSA----KGA---RAFLYP-----VV---V--EH---DL---LDFEV 262 (286)
Q Consensus 207 ~~aalv-g~~~~~k~~vl~~l~~~l~pgg~lv~r~~----~g~---r~~lyp-----~v---~--~~---~l---~gf~~ 262 (286)
++...+ .|+.++..++|+++++.|+|||+|++.+. .+- ...+|. .. + .+ ++ .||+.
T Consensus 249 ~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g~ert~~e~~~ll~~AGf~~ 328 (353)
T 4a6d_A 249 ILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSSAGFRD 328 (353)
T ss_dssp EEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTCEE
T ss_pred EeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHCCCce
Confidence 876544 67777778999999999999999988752 110 001110 00 1 11 12 59987
Q ss_pred EEEecCcccceeeeEEEeec
Q 042119 263 LSAVHPNDDVINSVVLVRNS 282 (286)
Q Consensus 263 ~~~~~P~~~vinsvi~~r~~ 282 (286)
+.+ +|.+. ..++|+|||.
T Consensus 329 v~v-~~~~~-~~~~i~ArKg 346 (353)
T 4a6d_A 329 FQF-KKTGA-IYDAILARKG 346 (353)
T ss_dssp EEE-ECCSS-SCEEEEEECC
T ss_pred EEE-EEcCC-ceEEEEEEec
Confidence 654 55544 4579999994
No 127
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.40 E-value=2e-13 Score=118.63 Aligned_cols=105 Identities=13% Similarity=0.158 Sum_probs=81.7
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeeh
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFL 208 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~ 208 (286)
.++.+|||+|||. |.+|+.++. ..|+++|+++|+|+.|++.|++.++..| +..+++| +|..+. ..-+.||+|+.
T Consensus 48 ~~~~~VLDlGCG~-GplAl~l~~-~~p~a~~~A~Di~~~~leiar~~~~~~g-~~~~v~~--~d~~~~-~~~~~~DvVLa 121 (200)
T 3fzg_A 48 KHVSSILDFGCGF-NPLALYQWN-ENEKIIYHAYDIDRAEIAFLSSIIGKLK-TTIKYRF--LNKESD-VYKGTYDVVFL 121 (200)
T ss_dssp CCCSEEEEETCTT-HHHHHHHHC-SSCCCEEEEECSCHHHHHHHHHHHHHSC-CSSEEEE--ECCHHH-HTTSEEEEEEE
T ss_pred CCCCeEEEecCCC-CHHHHHHHh-cCCCCEEEEEeCCHHHHHHHHHHHHhcC-CCccEEE--eccccc-CCCCCcChhhH
Confidence 5689999999996 556666766 4789999999999999999999999999 5556766 676543 23346999986
Q ss_pred hhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 209 AALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 209 aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
..+++.- ++....+..+.+.|+|||++|--.
T Consensus 122 ~k~LHlL-~~~~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 122 LKMLPVL-KQQDVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp ETCHHHH-HHTTCCHHHHHHTCEEEEEEEEEE
T ss_pred hhHHHhh-hhhHHHHHHHHHHhCCCCEEEEeC
Confidence 6544222 455567779999999999998865
No 128
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.40 E-value=1.7e-12 Score=116.20 Aligned_cols=116 Identities=18% Similarity=0.237 Sum_probs=90.3
Q ss_pred hhhhhHHHHHHHHhcCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEc
Q 042119 112 YVKLSKLEYTILSENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTR 191 (286)
Q Consensus 112 y~~l~~~E~~~l~~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~ 191 (286)
.....+.-...+.+. ..++.+|||+|||+ |..++.+++ .|.+|+++|+|+.+++.|+++++..| +. +++.++
T Consensus 103 ~~~tt~~~~~~l~~~-~~~~~~VLDiGcG~-G~l~~~la~---~g~~v~gvDi~~~~v~~a~~n~~~~~-~~--v~~~~~ 174 (254)
T 2nxc_A 103 HHETTRLALKALARH-LRPGDKVLDLGTGS-GVLAIAAEK---LGGKALGVDIDPMVLPQAEANAKRNG-VR--PRFLEG 174 (254)
T ss_dssp CSHHHHHHHHHHHHH-CCTTCEEEEETCTT-SHHHHHHHH---TTCEEEEEESCGGGHHHHHHHHHHTT-CC--CEEEES
T ss_pred CCHHHHHHHHHHHHh-cCCCCEEEEecCCC-cHHHHHHHH---hCCeEEEEECCHHHHHHHHHHHHHcC-Cc--EEEEEC
Confidence 344444444455444 46789999999997 666778887 46699999999999999999999888 43 999999
Q ss_pred cccchhhcCCCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 192 DIMEVKEQLGEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 192 D~~~~~~~l~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
|+.+.. ..+.||+|+..... .....++..+.+.|+|||.+++..
T Consensus 175 d~~~~~-~~~~fD~Vv~n~~~----~~~~~~l~~~~~~LkpgG~lils~ 218 (254)
T 2nxc_A 175 SLEAAL-PFGPFDLLVANLYA----ELHAALAPRYREALVPGGRALLTG 218 (254)
T ss_dssp CHHHHG-GGCCEEEEEEECCH----HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ChhhcC-cCCCCCEEEECCcH----HHHHHHHHHHHHHcCCCCEEEEEe
Confidence 987632 23579999965332 456689999999999999999864
No 129
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.40 E-value=1.3e-12 Score=122.22 Aligned_cols=110 Identities=18% Similarity=0.380 Sum_probs=86.7
Q ss_pred CCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhc--CCC-CCCeEEEEccccchhhcC--CC
Q 042119 128 VVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASD--AEF-EGRMKFLTRDIMEVKEQL--GE 202 (286)
Q Consensus 128 ~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~--g~l-~~~i~f~~~D~~~~~~~l--~~ 202 (286)
...+++||+||||. |..+..+++ +.++.+|+++|+|+++++.|++.+... | + ..+++++++|+.+..... +.
T Consensus 118 ~~~~~~VLdIG~G~-G~~a~~la~-~~~~~~V~~VDis~~~l~~Ar~~~~~~~~g-l~~~rv~~~~~D~~~~l~~~~~~~ 194 (334)
T 1xj5_A 118 IPNPKKVLVIGGGD-GGVLREVAR-HASIEQIDMCEIDKMVVDVSKQFFPDVAIG-YEDPRVNLVIGDGVAFLKNAAEGS 194 (334)
T ss_dssp SSCCCEEEEETCSS-SHHHHHHTT-CTTCCEEEEEESCHHHHHHHHHHCHHHHGG-GGSTTEEEEESCHHHHHHTSCTTC
T ss_pred CCCCCEEEEECCCc-cHHHHHHHH-cCCCCEEEEEECCHHHHHHHHHHHHhhccc-cCCCcEEEEECCHHHHHHhccCCC
Confidence 35779999999995 777788887 456789999999999999999998753 4 3 368999999998764432 47
Q ss_pred cceeehhhhccCChhH---HHHHHHHHHhhccCCcEEEEee
Q 042119 203 YDCIFLAALVGMSKEE---KLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 203 fD~V~~aalvg~~~~~---k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
||+|+.+..-...... ..++++.+.+.|+|||++++..
T Consensus 195 fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 235 (334)
T 1xj5_A 195 YDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQA 235 (334)
T ss_dssp EEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred ccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 9999976542111112 4689999999999999999974
No 130
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.40 E-value=3.3e-13 Score=119.74 Aligned_cols=100 Identities=9% Similarity=0.128 Sum_probs=79.7
Q ss_pred CCCCEEEEeccCCChhhHHHHHhh---cCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccch---hhcCC-
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKH---HLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEV---KEQLG- 201 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~---~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~---~~~l~- 201 (286)
.++.+|||||||+ |..++.+|+. ..++++|++||+|+++++.|+ + +.++++|+++|+.+. +...+
T Consensus 80 ~~~~~VLDiG~Gt-G~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~------~-~~~~v~~~~gD~~~~~~l~~~~~~ 151 (236)
T 2bm8_A 80 LRPRTIVELGVYN-GGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA------S-DMENITLHQGDCSDLTTFEHLREM 151 (236)
T ss_dssp HCCSEEEEECCTT-SHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG------G-GCTTEEEEECCSSCSGGGGGGSSS
T ss_pred cCCCEEEEEeCCC-CHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh------c-cCCceEEEECcchhHHHHHhhccC
Confidence 3578999999996 6777888873 257899999999999999887 2 346899999999874 32223
Q ss_pred CcceeehhhhccCChhHHHHHHHHHHh-hccCCcEEEEee
Q 042119 202 EYDCIFLAALVGMSKEEKLTILGHIRK-YMKDGGILLVRS 240 (286)
Q Consensus 202 ~fD~V~~aalvg~~~~~k~~vl~~l~~-~l~pgg~lv~r~ 240 (286)
.||+|++++.. .+..+++.++.+ .|||||++++.+
T Consensus 152 ~fD~I~~d~~~----~~~~~~l~~~~r~~LkpGG~lv~~d 187 (236)
T 2bm8_A 152 AHPLIFIDNAH----ANTFNIMKWAVDHLLEEGDYFIIED 187 (236)
T ss_dssp CSSEEEEESSC----SSHHHHHHHHHHHTCCTTCEEEECS
T ss_pred CCCEEEECCch----HhHHHHHHHHHHhhCCCCCEEEEEe
Confidence 69999976543 255679999997 999999999965
No 131
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.39 E-value=8.8e-13 Score=115.01 Aligned_cols=102 Identities=18% Similarity=0.238 Sum_probs=84.4
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeeh
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFL 208 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~ 208 (286)
.++.+|||||||+ |..+..+++ .|++|+|+|+|+++++.|++.. . ..+++|+++|+.+++...+.||+|+.
T Consensus 52 ~~~~~vLDiG~G~-G~~~~~l~~---~~~~v~~vD~s~~~~~~a~~~~---~--~~~~~~~~~d~~~~~~~~~~fD~v~~ 122 (242)
T 3l8d_A 52 KKEAEVLDVGCGD-GYGTYKLSR---TGYKAVGVDISEVMIQKGKERG---E--GPDLSFIKGDLSSLPFENEQFEAIMA 122 (242)
T ss_dssp CTTCEEEEETCTT-SHHHHHHHH---TTCEEEEEESCHHHHHHHHTTT---C--BTTEEEEECBTTBCSSCTTCEEEEEE
T ss_pred CCCCeEEEEcCCC-CHHHHHHHH---cCCeEEEEECCHHHHHHHHhhc---c--cCCceEEEcchhcCCCCCCCccEEEE
Confidence 5788999999996 666778887 4889999999999999999873 2 36899999999887765568999997
Q ss_pred hhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 209 AALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 209 aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
...+. +.++..++++++.+.|+|||.+++..
T Consensus 123 ~~~l~-~~~~~~~~l~~~~~~L~pgG~l~i~~ 153 (242)
T 3l8d_A 123 INSLE-WTEEPLRALNEIKRVLKSDGYACIAI 153 (242)
T ss_dssp ESCTT-SSSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cChHh-hccCHHHHHHHHHHHhCCCeEEEEEE
Confidence 65443 23566789999999999999999975
No 132
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.39 E-value=3.8e-13 Score=118.06 Aligned_cols=99 Identities=15% Similarity=0.156 Sum_probs=80.0
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchh--hcCCCccee
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVK--EQLGEYDCI 206 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~--~~l~~fD~V 206 (286)
+++.+|||||||+ |..+..+++ .|++|+|+|+|+++++.|++. ++++++|+.+.. ...+.||+|
T Consensus 40 ~~~~~vLDiGcG~-G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~----------~~~~~~d~~~~~~~~~~~~fD~i 105 (240)
T 3dli_A 40 KGCRRVLDIGCGR-GEFLELCKE---EGIESIGVDINEDMIKFCEGK----------FNVVKSDAIEYLKSLPDKYLDGV 105 (240)
T ss_dssp TTCSCEEEETCTT-THHHHHHHH---HTCCEEEECSCHHHHHHHHTT----------SEEECSCHHHHHHTSCTTCBSEE
T ss_pred cCCCeEEEEeCCC-CHHHHHHHh---CCCcEEEEECCHHHHHHHHhh----------cceeeccHHHHhhhcCCCCeeEE
Confidence 5779999999997 555677887 478999999999999998875 689999998763 233579999
Q ss_pred ehhhhc-cCChhHHHHHHHHHHhhccCCcEEEEeec
Q 042119 207 FLAALV-GMSKEEKLTILGHIRKYMKDGGILLVRSA 241 (286)
Q Consensus 207 ~~aalv-g~~~~~k~~vl~~l~~~l~pgg~lv~r~~ 241 (286)
+....+ .++.++...+++++.+.|||||.+++...
T Consensus 106 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 141 (240)
T 3dli_A 106 MISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESP 141 (240)
T ss_dssp EEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEE
T ss_pred EECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeC
Confidence 976544 44545668999999999999999999763
No 133
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.39 E-value=1.3e-12 Score=112.63 Aligned_cols=105 Identities=10% Similarity=0.098 Sum_probs=81.4
Q ss_pred CCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhh-cCCCcceeeh
Q 042119 130 QPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKE-QLGEYDCIFL 208 (286)
Q Consensus 130 ~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~-~l~~fD~V~~ 208 (286)
++.+|||+|||+ |..++.++++ ...+|+++|+|+++++.|++.++..| + ++++|+++|+.+... ..+.||+|+.
T Consensus 54 ~~~~vLDlgcG~-G~~~~~l~~~--~~~~V~~vD~s~~~l~~a~~~~~~~~-~-~~v~~~~~D~~~~~~~~~~~fD~V~~ 128 (202)
T 2fpo_A 54 VDAQCLDCFAGS-GALGLEALSR--YAAGATLIEMDRAVSQQLIKNLATLK-A-GNARVVNSNAMSFLAQKGTPHNIVFV 128 (202)
T ss_dssp TTCEEEETTCTT-CHHHHHHHHT--TCSEEEEECSCHHHHHHHHHHHHHTT-C-CSEEEECSCHHHHHSSCCCCEEEEEE
T ss_pred CCCeEEEeCCCc-CHHHHHHHhc--CCCEEEEEECCHHHHHHHHHHHHHcC-C-CcEEEEECCHHHHHhhcCCCCCEEEE
Confidence 578999999997 5555655551 23599999999999999999999998 4 789999999987443 2347999997
Q ss_pred hhhccCChhHHHHHHHHHHh--hccCCcEEEEeec
Q 042119 209 AALVGMSKEEKLTILGHIRK--YMKDGGILLVRSA 241 (286)
Q Consensus 209 aalvg~~~~~k~~vl~~l~~--~l~pgg~lv~r~~ 241 (286)
+.... .....++++.+.+ .|+|||++++...
T Consensus 129 ~~p~~--~~~~~~~l~~l~~~~~L~pgG~l~i~~~ 161 (202)
T 2fpo_A 129 DPPFR--RGLLEETINLLEDNGWLADEALIYVESE 161 (202)
T ss_dssp CCSSS--TTTHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred CCCCC--CCcHHHHHHHHHhcCccCCCcEEEEEEC
Confidence 64311 2455678888876 4999999988753
No 134
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.39 E-value=2.9e-12 Score=119.67 Aligned_cols=111 Identities=21% Similarity=0.212 Sum_probs=89.3
Q ss_pred hcCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcc
Q 042119 125 ENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYD 204 (286)
Q Consensus 125 ~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD 204 (286)
.....++.+|||||||+ |..++.+++ ..++.+++++|+ +++++.|++.+...| +.++++|+++|..+ ..+ ..||
T Consensus 177 ~~~~~~~~~vlDvG~G~-G~~~~~l~~-~~~~~~~~~~D~-~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~-~~~-~~~D 250 (374)
T 1qzz_A 177 AYDWSAVRHVLDVGGGN-GGMLAAIAL-RAPHLRGTLVEL-AGPAERARRRFADAG-LADRVTVAEGDFFK-PLP-VTAD 250 (374)
T ss_dssp TSCCTTCCEEEEETCTT-SHHHHHHHH-HCTTCEEEEEEC-HHHHHHHHHHHHHTT-CTTTEEEEECCTTS-CCS-CCEE
T ss_pred hCCCCCCCEEEEECCCc-CHHHHHHHH-HCCCCEEEEEeC-HHHHHHHHHHHHhcC-CCCceEEEeCCCCC-cCC-CCCC
Confidence 33456789999999997 566677777 368899999999 999999999999998 67799999999865 222 2499
Q ss_pred eeehhhhc-cCChhHHHHHHHHHHhhccCCcEEEEeec
Q 042119 205 CIFLAALV-GMSKEEKLTILGHIRKYMKDGGILLVRSA 241 (286)
Q Consensus 205 ~V~~aalv-g~~~~~k~~vl~~l~~~l~pgg~lv~r~~ 241 (286)
+|+....+ .++.+...++++++.+.|+|||.+++.+.
T Consensus 251 ~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 251 VVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 99876544 45555667899999999999998887654
No 135
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.39 E-value=8.2e-13 Score=119.10 Aligned_cols=106 Identities=16% Similarity=0.107 Sum_probs=85.7
Q ss_pred cCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhc-CCCCCCeEEEEccccchhhcCCCcc
Q 042119 126 NGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASD-AEFEGRMKFLTRDIMEVKEQLGEYD 204 (286)
Q Consensus 126 ~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~-g~l~~~i~f~~~D~~~~~~~l~~fD 204 (286)
....++.+|||+|||+ |..++.+++...++.+|+++|+++++++.|++.++.. |. ++++|+++|+.+ ..+.+.||
T Consensus 106 ~~~~~~~~VLD~G~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~--~~v~~~~~d~~~-~~~~~~fD 181 (275)
T 1yb2_A 106 CGLRPGMDILEVGVGS-GNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDI--GNVRTSRSDIAD-FISDQMYD 181 (275)
T ss_dssp CCCCTTCEEEEECCTT-SHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCC--TTEEEECSCTTT-CCCSCCEE
T ss_pred cCCCCcCEEEEecCCC-CHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCC--CcEEEEECchhc-cCcCCCcc
Confidence 3457889999999997 5555677763357899999999999999999999988 73 689999999976 32335799
Q ss_pred eeehhhhccCChhHHHHHHHHHHhhccCCcEEEEeec
Q 042119 205 CIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRSA 241 (286)
Q Consensus 205 ~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~~ 241 (286)
+|+.+. ++..++++++.+.|+|||.+++...
T Consensus 182 ~Vi~~~------~~~~~~l~~~~~~LkpgG~l~i~~~ 212 (275)
T 1yb2_A 182 AVIADI------PDPWNHVQKIASMMKPGSVATFYLP 212 (275)
T ss_dssp EEEECC------SCGGGSHHHHHHTEEEEEEEEEEES
T ss_pred EEEEcC------cCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 999631 3445799999999999999998763
No 136
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.38 E-value=1.3e-11 Score=119.38 Aligned_cols=113 Identities=13% Similarity=0.125 Sum_probs=87.3
Q ss_pred HHhcCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHH-------HHHHHhcCCCC-CCeEEEEcccc
Q 042119 123 LSENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVA-------RSIVASDAEFE-GRMKFLTRDIM 194 (286)
Q Consensus 123 l~~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~A-------r~~~~~~g~l~-~~i~f~~~D~~ 194 (286)
+....+.++.+|||||||+ |..++.+|+. .+..+|+|||+++++++.| ++.++..| +. .+++|+++|..
T Consensus 235 l~~l~l~~g~~VLDLGCGs-G~la~~LA~~-~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~G-l~~~nV~~i~gD~~ 311 (433)
T 1u2z_A 235 YQQCQLKKGDTFMDLGSGV-GNCVVQAALE-CGCALSFGCEIMDDASDLTILQYEELKKRCKLYG-MRLNNVEFSLKKSF 311 (433)
T ss_dssp HHHTTCCTTCEEEEESCTT-SHHHHHHHHH-HCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTT-BCCCCEEEEESSCS
T ss_pred HHhcCCCCCCEEEEeCCCc-CHHHHHHHHH-CCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcC-CCCCceEEEEcCcc
Confidence 3344668899999999996 6677788873 3446899999999999999 88888888 54 78999998765
Q ss_pred ch----hhcCCCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 195 EV----KEQLGEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 195 ~~----~~~l~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
.. ....+.||+|++.... +. ++...+|.++.+.|||||++++..
T Consensus 312 ~~~~~~~~~~~~FDvIvvn~~l-~~-~d~~~~L~el~r~LKpGG~lVi~d 359 (433)
T 1u2z_A 312 VDNNRVAELIPQCDVILVNNFL-FD-EDLNKKVEKILQTAKVGCKIISLK 359 (433)
T ss_dssp TTCHHHHHHGGGCSEEEECCTT-CC-HHHHHHHHHHHTTCCTTCEEEESS
T ss_pred ccccccccccCCCCEEEEeCcc-cc-ccHHHHHHHHHHhCCCCeEEEEee
Confidence 31 1123579999964332 22 566678999999999999999974
No 137
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.38 E-value=6.6e-13 Score=116.41 Aligned_cols=105 Identities=11% Similarity=0.131 Sum_probs=82.1
Q ss_pred hcCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccc----hhhcC
Q 042119 125 ENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIME----VKEQL 200 (286)
Q Consensus 125 ~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~----~~~~l 200 (286)
.....++.+|||||||+ |..+..+|+. .+..+|+++|+|+++++.|++.++.. .+++++++|+.+ .+..
T Consensus 69 ~~~~~~~~~VLDlGcG~-G~~~~~la~~-~~~~~v~gvD~s~~~~~~a~~~~~~~----~~v~~~~~d~~~~~~~~~~~- 141 (230)
T 1fbn_A 69 VMPIKRDSKILYLGASA-GTTPSHVADI-ADKGIVYAIEYAPRIMRELLDACAER----ENIIPILGDANKPQEYANIV- 141 (230)
T ss_dssp CCCCCTTCEEEEESCCS-SHHHHHHHHH-TTTSEEEEEESCHHHHHHHHHHTTTC----TTEEEEECCTTCGGGGTTTS-
T ss_pred ccCCCCCCEEEEEcccC-CHHHHHHHHH-cCCcEEEEEECCHHHHHHHHHHhhcC----CCeEEEECCCCCcccccccC-
Confidence 33457889999999997 6777888873 44689999999999999999985543 589999999977 4433
Q ss_pred CCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEe
Q 042119 201 GEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVR 239 (286)
Q Consensus 201 ~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r 239 (286)
..||+|+.+ +. +......+++++.+.|+|||.+++.
T Consensus 142 ~~~D~v~~~--~~-~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 142 EKVDVIYED--VA-QPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp CCEEEEEEC--CC-STTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccEEEEEEe--cC-ChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 579999932 21 2233467899999999999999885
No 138
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.38 E-value=1.6e-12 Score=114.68 Aligned_cols=108 Identities=14% Similarity=0.119 Sum_probs=87.8
Q ss_pred hcCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhc-CCCCCCeEEEEccccchhhcCCCc
Q 042119 125 ENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASD-AEFEGRMKFLTRDIMEVKEQLGEY 203 (286)
Q Consensus 125 ~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~-g~l~~~i~f~~~D~~~~~~~l~~f 203 (286)
.....++.+||++|||+ |..++.+++...++.+|+++|+++++++.|++.++.. |. ++++++++|+.+.+.+.+.|
T Consensus 91 ~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~--~~v~~~~~d~~~~~~~~~~~ 167 (258)
T 2pwy_A 91 LLDLAPGMRVLEAGTGS-GGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQV--ENVRFHLGKLEEAELEEAAY 167 (258)
T ss_dssp HTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCC--CCEEEEESCGGGCCCCTTCE
T ss_pred HcCCCCCCEEEEECCCc-CHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCC--CCEEEEECchhhcCCCCCCc
Confidence 34567889999999997 6666777773356899999999999999999999887 73 68999999998763333579
Q ss_pred ceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEeec
Q 042119 204 DCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRSA 241 (286)
Q Consensus 204 D~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~~ 241 (286)
|+|+.+. ++...+++++.+.|+|||.+++-..
T Consensus 168 D~v~~~~------~~~~~~l~~~~~~L~~gG~l~~~~~ 199 (258)
T 2pwy_A 168 DGVALDL------MEPWKVLEKAALALKPDRFLVAYLP 199 (258)
T ss_dssp EEEEEES------SCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred CEEEECC------cCHHHHHHHHHHhCCCCCEEEEEeC
Confidence 9999742 3444799999999999999998763
No 139
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.38 E-value=1.8e-12 Score=116.43 Aligned_cols=110 Identities=16% Similarity=0.225 Sum_probs=85.9
Q ss_pred CCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHh---cCCCCCCeEEEEccccchhh------
Q 042119 128 VVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVAS---DAEFEGRMKFLTRDIMEVKE------ 198 (286)
Q Consensus 128 ~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~---~g~l~~~i~f~~~D~~~~~~------ 198 (286)
..++.+|||+|||+ |..++.+|+ ..++.+|+++|+|+++++.|++++.. .| +.++++++++|+.+...
T Consensus 34 ~~~~~~VLDlG~G~-G~~~l~la~-~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~-l~~~v~~~~~D~~~~~~~~~~~~ 110 (260)
T 2ozv_A 34 DDRACRIADLGAGA-GAAGMAVAA-RLEKAEVTLYERSQEMAEFARRSLELPDNAA-FSARIEVLEADVTLRAKARVEAG 110 (260)
T ss_dssp CCSCEEEEECCSSS-SHHHHHHHH-HCTTEEEEEEESSHHHHHHHHHHTTSGGGTT-TGGGEEEEECCTTCCHHHHHHTT
T ss_pred ccCCCEEEEeCChH-hHHHHHHHH-hCCCCeEEEEECCHHHHHHHHHHHHhhhhCC-CcceEEEEeCCHHHHhhhhhhhc
Confidence 46778999999997 666677887 36789999999999999999999988 88 67789999999987632
Q ss_pred -cCCCcceeehhhh-c----------------cCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 199 -QLGEYDCIFLAAL-V----------------GMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 199 -~l~~fD~V~~aal-v----------------g~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
..+.||+|+..-- . .........+++.+.+.|+|||.+++-.
T Consensus 111 ~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 170 (260)
T 2ozv_A 111 LPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLIS 170 (260)
T ss_dssp CCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 2357999987510 0 0111235679999999999999998754
No 140
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.38 E-value=8.9e-14 Score=122.03 Aligned_cols=105 Identities=20% Similarity=0.191 Sum_probs=85.2
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeeh
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFL 208 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~ 208 (286)
.++.+|||+|||+ |..++.+|+ .|.+|+|+|+|+.+++.|++.++..| +.++++|+++|+.+.+. ...||+|+.
T Consensus 77 ~~~~~vLD~gcG~-G~~~~~la~---~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~~~d~~~~~~-~~~~D~v~~ 150 (241)
T 3gdh_A 77 FKCDVVVDAFCGV-GGNTIQFAL---TGMRVIAIDIDPVKIALARNNAEVYG-IADKIEFICGDFLLLAS-FLKADVVFL 150 (241)
T ss_dssp SCCSEEEETTCTT-SHHHHHHHH---TTCEEEEEESCHHHHHHHHHHHHHTT-CGGGEEEEESCHHHHGG-GCCCSEEEE
T ss_pred cCCCEEEECcccc-CHHHHHHHH---cCCEEEEEECCHHHHHHHHHHHHHcC-CCcCeEEEECChHHhcc-cCCCCEEEE
Confidence 3789999999997 566778887 57999999999999999999999999 66789999999988763 358999997
Q ss_pred hhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 209 AALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 209 aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
....+. .......+.++.+.|+|||.+++..
T Consensus 151 ~~~~~~-~~~~~~~~~~~~~~L~pgG~~i~~~ 181 (241)
T 3gdh_A 151 SPPWGG-PDYATAETFDIRTMMSPDGFEIFRL 181 (241)
T ss_dssp CCCCSS-GGGGGSSSBCTTTSCSSCHHHHHHH
T ss_pred CCCcCC-cchhhhHHHHHHhhcCCcceeHHHH
Confidence 643322 2333346778999999999988764
No 141
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.38 E-value=9e-13 Score=114.58 Aligned_cols=106 Identities=16% Similarity=0.232 Sum_probs=85.0
Q ss_pred CCCCCCEEEEeccCCChhhHHHHHhhcC----CCcEEEEEeCChHHHHHHHHHHHhcCCC----CCCeEEEEccccchh-
Q 042119 127 GVVQPKKVAFVGSGPMPLTSIIMAKHHL----TSTHFDNFDIDEAANDVARSIVASDAEF----EGRMKFLTRDIMEVK- 197 (286)
Q Consensus 127 ~~~~~~~VL~IG~G~lp~tai~lA~~~~----~g~~V~~iDid~~ai~~Ar~~~~~~g~l----~~~i~f~~~D~~~~~- 197 (286)
.+.++.+||+||||+ |..+..+++... ++++|+++|+|+++++.|++.++..| + ..+++|+++|+.+..
T Consensus 77 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~-~~~~~~~~v~~~~~d~~~~~~ 154 (227)
T 2pbf_A 77 VLKPGSRAIDVGSGS-GYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDK-PELLKIDNFKIIHKNIYQVNE 154 (227)
T ss_dssp TSCTTCEEEEESCTT-SHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHC-GGGGSSTTEEEEECCGGGCCH
T ss_pred hCCCCCEEEEECCCC-CHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcC-ccccccCCEEEEECChHhccc
Confidence 357789999999997 666777887422 45799999999999999999999887 3 368999999997743
Q ss_pred ---hcCCCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEeec
Q 042119 198 ---EQLGEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRSA 241 (286)
Q Consensus 198 ---~~l~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~~ 241 (286)
...+.||+|+...... .+++++.+.|+|||++++-..
T Consensus 155 ~~~~~~~~fD~I~~~~~~~-------~~~~~~~~~LkpgG~lv~~~~ 194 (227)
T 2pbf_A 155 EEKKELGLFDAIHVGASAS-------ELPEILVDLLAENGKLIIPIE 194 (227)
T ss_dssp HHHHHHCCEEEEEECSBBS-------SCCHHHHHHEEEEEEEEEEEE
T ss_pred ccCccCCCcCEEEECCchH-------HHHHHHHHhcCCCcEEEEEEc
Confidence 3345799998776542 256788999999999998764
No 142
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.38 E-value=1.4e-12 Score=122.10 Aligned_cols=106 Identities=19% Similarity=0.241 Sum_probs=86.0
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeeh
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFL 208 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~ 208 (286)
.++++|||||||+ |..++.+|++ +..+|+|+|+|+ +++.|++.++..| +.++++|+++|+.+++.+.+.||+|+.
T Consensus 65 ~~~~~VLDvGcG~-G~~~~~la~~--g~~~v~gvD~s~-~l~~a~~~~~~~~-~~~~v~~~~~d~~~~~~~~~~fD~Iis 139 (349)
T 3q7e_A 65 FKDKVVLDVGSGT-GILCMFAAKA--GARKVIGIECSS-ISDYAVKIVKANK-LDHVVTIIKGKVEEVELPVEKVDIIIS 139 (349)
T ss_dssp HTTCEEEEESCTT-SHHHHHHHHT--TCSEEEEEECST-HHHHHHHHHHHTT-CTTTEEEEESCTTTCCCSSSCEEEEEE
T ss_pred CCCCEEEEEeccc-hHHHHHHHHC--CCCEEEEECcHH-HHHHHHHHHHHcC-CCCcEEEEECcHHHccCCCCceEEEEE
Confidence 5789999999997 5667788872 445999999995 9999999999999 788899999999887655568999986
Q ss_pred hhh--ccCChhHHHHHHHHHHhhccCCcEEEEe
Q 042119 209 AAL--VGMSKEEKLTILGHIRKYMKDGGILLVR 239 (286)
Q Consensus 209 aal--vg~~~~~k~~vl~~l~~~l~pgg~lv~r 239 (286)
..+ .....+....++..+.+.|||||+++..
T Consensus 140 ~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 140 EWMGYCLFYESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp CCCBBTBTBTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred ccccccccCchhHHHHHHHHHHhCCCCCEEccc
Confidence 431 1123356778999999999999998753
No 143
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.38 E-value=2.1e-12 Score=113.14 Aligned_cols=148 Identities=9% Similarity=0.117 Sum_probs=99.9
Q ss_pred hcCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccch---hhcCC
Q 042119 125 ENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEV---KEQLG 201 (286)
Q Consensus 125 ~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~---~~~l~ 201 (286)
...+.++.+|||+|||+ |..+..+|+...++.+|+++|+|+++++.+.+.++.. .+++|+++|+.+. +...+
T Consensus 72 ~~~~~~~~~vLDlG~G~-G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~----~~v~~~~~d~~~~~~~~~~~~ 146 (233)
T 2ipx_A 72 QIHIKPGAKVLYLGAAS-GTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR----TNIIPVIEDARHPHKYRMLIA 146 (233)
T ss_dssp CCCCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC----TTEEEECSCTTCGGGGGGGCC
T ss_pred eecCCCCCEEEEEcccC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc----CCeEEEEcccCChhhhcccCC
Confidence 34567889999999997 6667778874336789999999999999888887764 4799999999873 22335
Q ss_pred CcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEeecCcceeee------cccCCcccc--cCcEEEEEe--cCccc
Q 042119 202 EYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRSAKGARAFL------YPVVVEHDL--LDFEVLSAV--HPNDD 271 (286)
Q Consensus 202 ~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~~~g~r~~l------yp~v~~~~l--~gf~~~~~~--~P~~~ 271 (286)
.||+|+.+.. .......++.++.+.|+|||.+++........+. |.. +...+ .||++.... .|...
T Consensus 147 ~~D~V~~~~~---~~~~~~~~~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~-~~~~l~~~Gf~~~~~~~~~~~~~ 222 (233)
T 2ipx_A 147 MVDVIFADVA---QPDQTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFAS-EVKKMQQENMKPQEQLTLEPYER 222 (233)
T ss_dssp CEEEEEECCC---CTTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCSSSCHHHHHHH-HHHTTGGGTEEEEEEEECTTTSS
T ss_pred cEEEEEEcCC---CccHHHHHHHHHHHHcCCCeEEEEEEcccccccCCCHHHHHHH-HHHHHHHCCCceEEEEecCCccC
Confidence 7999997533 2234456788999999999999984321100010 110 01122 489887643 34433
Q ss_pred ceeeeEEEeec
Q 042119 272 VINSVVLVRNS 282 (286)
Q Consensus 272 vinsvi~~r~~ 282 (286)
- ..+++++++
T Consensus 223 ~-~~~v~~~~~ 232 (233)
T 2ipx_A 223 D-HAVVVGVYR 232 (233)
T ss_dssp S-EEEEEEEEC
T ss_pred C-cEEEEEEeC
Confidence 2 347777775
No 144
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.38 E-value=2.5e-12 Score=116.13 Aligned_cols=109 Identities=17% Similarity=0.147 Sum_probs=78.3
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCC----------------CCC--------
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAE----------------FEG-------- 184 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~----------------l~~-------- 184 (286)
.++.+|||||||++. +++.+++ .++.+|+|+|+|++|++.|++.++..+. ...
T Consensus 70 ~~~~~vLDiGcG~G~-~~~l~~~--~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 146 (289)
T 2g72_A 70 VSGRTLIDIGSGPTV-YQLLSAC--SHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQ 146 (289)
T ss_dssp SCCSEEEEETCTTCC-GGGTTGG--GGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHH
T ss_pred CCCCeEEEECCCcCh-HHHHhhc--cCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHH
Confidence 477899999999855 5555554 3578999999999999999986543210 001
Q ss_pred ----CeEEEEccccc-hhhc---C--CCcceeehhhhccC---ChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 185 ----RMKFLTRDIME-VKEQ---L--GEYDCIFLAALVGM---SKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 185 ----~i~f~~~D~~~-~~~~---l--~~fD~V~~aalvg~---~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
.++++++|+.+ .+.. + +.||+|+....+.+ +.++..+++.++.+.|||||.+++..
T Consensus 147 ~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~ 215 (289)
T 2g72_A 147 LRARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIG 215 (289)
T ss_dssp HHHHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred HHhhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 25788889876 4321 1 34999986543211 14578899999999999999999864
No 145
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.38 E-value=4.4e-12 Score=115.69 Aligned_cols=106 Identities=20% Similarity=0.284 Sum_probs=83.6
Q ss_pred CCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCc---cee
Q 042119 130 QPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEY---DCI 206 (286)
Q Consensus 130 ~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~f---D~V 206 (286)
++.+|||||||+ |.-++.+|+. ++++|+++|+|+++++.|+++++..| +.++++|+++|+.+... +.| |+|
T Consensus 123 ~~~~vLDlG~Gs-G~~~~~la~~--~~~~v~~vDis~~al~~A~~n~~~~~-l~~~v~~~~~D~~~~~~--~~f~~~D~I 196 (284)
T 1nv8_A 123 GIKTVADIGTGS-GAIGVSVAKF--SDAIVFATDVSSKAVEIARKNAERHG-VSDRFFVRKGEFLEPFK--EKFASIEMI 196 (284)
T ss_dssp TCCEEEEESCTT-SHHHHHHHHH--SSCEEEEEESCHHHHHHHHHHHHHTT-CTTSEEEEESSTTGGGG--GGTTTCCEE
T ss_pred CCCEEEEEeCch-hHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcC-CCCceEEEECcchhhcc--cccCCCCEE
Confidence 568999999996 6667888883 89999999999999999999999999 67789999999977432 368 999
Q ss_pred ehhh-hcc----------CC-------hhHHHHHHHHHH-hhccCCcEEEEeec
Q 042119 207 FLAA-LVG----------MS-------KEEKLTILGHIR-KYMKDGGILLVRSA 241 (286)
Q Consensus 207 ~~aa-lvg----------~~-------~~~k~~vl~~l~-~~l~pgg~lv~r~~ 241 (286)
+..- .++ +. ..+...+++++. +.++|||.+++...
T Consensus 197 vsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~ 250 (284)
T 1nv8_A 197 LSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIG 250 (284)
T ss_dssp EECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECC
T ss_pred EEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEEC
Confidence 8641 000 00 012237899999 99999999998643
No 146
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.37 E-value=1.2e-12 Score=117.49 Aligned_cols=101 Identities=16% Similarity=0.169 Sum_probs=82.7
Q ss_pred CCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCccee
Q 042119 127 GVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCI 206 (286)
Q Consensus 127 ~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V 206 (286)
...++.+|||||||+ |..+..+++ ++++|+|+|+|+++++.|++.. .+++|+++|+.+++. .+.||+|
T Consensus 54 ~~~~~~~vLDiGcG~-G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~-------~~~~~~~~d~~~~~~-~~~fD~v 121 (279)
T 3ccf_A 54 NPQPGEFILDLGCGT-GQLTEKIAQ---SGAEVLGTDNAATMIEKARQNY-------PHLHFDVADARNFRV-DKPLDAV 121 (279)
T ss_dssp CCCTTCEEEEETCTT-SHHHHHHHH---TTCEEEEEESCHHHHHHHHHHC-------TTSCEEECCTTTCCC-SSCEEEE
T ss_pred CCCCCCEEEEecCCC-CHHHHHHHh---CCCeEEEEECCHHHHHHHHhhC-------CCCEEEECChhhCCc-CCCcCEE
Confidence 456789999999996 666677877 8899999999999999999863 368999999988665 3579999
Q ss_pred ehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 207 FLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 207 ~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
+....+.+ ..+...+++++.+.|+|||.+++..
T Consensus 122 ~~~~~l~~-~~d~~~~l~~~~~~LkpgG~l~~~~ 154 (279)
T 3ccf_A 122 FSNAMLHW-VKEPEAAIASIHQALKSGGRFVAEF 154 (279)
T ss_dssp EEESCGGG-CSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEcchhhh-CcCHHHHHHHHHHhcCCCcEEEEEe
Confidence 87654432 2456689999999999999999865
No 147
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.37 E-value=8.5e-13 Score=122.49 Aligned_cols=110 Identities=23% Similarity=0.329 Sum_probs=83.2
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhc--CCC-CCCeEEEEccccchhh-cCCCcc
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASD--AEF-EGRMKFLTRDIMEVKE-QLGEYD 204 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~--g~l-~~~i~f~~~D~~~~~~-~l~~fD 204 (286)
..+++||+||||. |..+..+++ +.++.+|+++|+|+++++.|++.+... | + .++++++++|+.+... ..+.||
T Consensus 107 ~~~~~VLdIG~G~-G~~~~~l~~-~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~-~~~~rv~~~~~D~~~~l~~~~~~fD 183 (314)
T 2b2c_A 107 PDPKRVLIIGGGD-GGILREVLK-HESVEKVTMCEIDEMVIDVAKKFLPGMSCG-FSHPKLDLFCGDGFEFLKNHKNEFD 183 (314)
T ss_dssp SSCCEEEEESCTT-SHHHHHHTT-CTTCCEEEEECSCHHHHHHHHHHCTTTSGG-GGCTTEEEECSCHHHHHHHCTTCEE
T ss_pred CCCCEEEEEcCCc-CHHHHHHHH-cCCCCEEEEEECCHHHHHHHHHHHHHhccc-cCCCCEEEEEChHHHHHHhcCCCce
Confidence 4678999999995 677788887 456799999999999999999987654 3 3 4789999999987543 235799
Q ss_pred eeehhhhccCChhHH---HHHHHHHHhhccCCcEEEEeec
Q 042119 205 CIFLAALVGMSKEEK---LTILGHIRKYMKDGGILLVRSA 241 (286)
Q Consensus 205 ~V~~aalvg~~~~~k---~~vl~~l~~~l~pgg~lv~r~~ 241 (286)
+|+.+..-....... .++++.+.+.|+|||++++...
T Consensus 184 ~Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~ 223 (314)
T 2b2c_A 184 VIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQGE 223 (314)
T ss_dssp EEEECCC-------------HHHHHHHHEEEEEEEEEECC
T ss_pred EEEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEECC
Confidence 999775421111111 5899999999999999999763
No 148
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.37 E-value=1.2e-12 Score=113.97 Aligned_cols=103 Identities=12% Similarity=0.162 Sum_probs=81.9
Q ss_pred CCCCCEEEEeccCCChhhHHHHHhhcCCCc-EEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCccee
Q 042119 128 VVQPKKVAFVGSGPMPLTSIIMAKHHLTST-HFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCI 206 (286)
Q Consensus 128 ~~~~~~VL~IG~G~lp~tai~lA~~~~~g~-~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V 206 (286)
..++.+|||||||+ |..+..+++ .+. +|+++|+|+++++.|++.... .+++++++|+.+.+...+.||+|
T Consensus 41 ~~~~~~vLdiG~G~-G~~~~~l~~---~~~~~v~~vD~s~~~~~~a~~~~~~-----~~~~~~~~d~~~~~~~~~~fD~v 111 (243)
T 3bkw_A 41 EVGGLRIVDLGCGF-GWFCRWAHE---HGASYVLGLDLSEKMLARARAAGPD-----TGITYERADLDKLHLPQDSFDLA 111 (243)
T ss_dssp CCTTCEEEEETCTT-CHHHHHHHH---TTCSEEEEEESCHHHHHHHHHTSCS-----SSEEEEECCGGGCCCCTTCEEEE
T ss_pred ccCCCEEEEEcCcC-CHHHHHHHH---CCCCeEEEEcCCHHHHHHHHHhccc-----CCceEEEcChhhccCCCCCceEE
Confidence 45789999999997 556677777 355 999999999999999986321 47999999998866544679999
Q ss_pred ehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 207 FLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 207 ~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
+....+.. .++..++++++.+.|+|||.+++..
T Consensus 112 ~~~~~l~~-~~~~~~~l~~~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 112 YSSLALHY-VEDVARLFRTVHQALSPGGHFVFST 144 (243)
T ss_dssp EEESCGGG-CSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEeccccc-cchHHHHHHHHHHhcCcCcEEEEEe
Confidence 86644322 2466789999999999999999865
No 149
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.37 E-value=2e-12 Score=115.16 Aligned_cols=119 Identities=16% Similarity=0.180 Sum_probs=88.4
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeeh
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFL 208 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~ 208 (286)
.++.+||+||||+ |..+..+++ ..++.+|+++|+|+++++.|++. + .+++|.++|+.+++...+.||+|+.
T Consensus 84 ~~~~~vLdiG~G~-G~~~~~l~~-~~~~~~v~~vD~s~~~~~~a~~~----~---~~~~~~~~d~~~~~~~~~~fD~v~~ 154 (269)
T 1p91_A 84 DKATAVLDIGCGE-GYYTHAFAD-ALPEITTFGLDVSKVAIKAAAKR----Y---PQVTFCVASSHRLPFSDTSMDAIIR 154 (269)
T ss_dssp TTCCEEEEETCTT-STTHHHHHH-TCTTSEEEEEESCHHHHHHHHHH----C---TTSEEEECCTTSCSBCTTCEEEEEE
T ss_pred CCCCEEEEECCCC-CHHHHHHHH-hCCCCeEEEEeCCHHHHHHHHHh----C---CCcEEEEcchhhCCCCCCceeEEEE
Confidence 5788999999998 666677777 35789999999999999999886 2 4689999999877655568999984
Q ss_pred hhhccCChhHHHHHHHHHHhhccCCcEEEEeecC-----cceeeecccCCcc-----cccCcEEEE
Q 042119 209 AALVGMSKEEKLTILGHIRKYMKDGGILLVRSAK-----GARAFLYPVVVEH-----DLLDFEVLS 264 (286)
Q Consensus 209 aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~~~-----g~r~~lyp~v~~~-----~l~gf~~~~ 264 (286)
. .+ ...++++.+.|+|||.+++.... .++..+|+..... ...||+++.
T Consensus 155 ~-~~-------~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~~~ 212 (269)
T 1p91_A 155 I-YA-------PCKAEELARVVKPGGWVITATPGPRHLMELKGLIYNEVHLHAPHAEQLEGFTLQQ 212 (269)
T ss_dssp E-SC-------CCCHHHHHHHEEEEEEEEEEEECTTTTHHHHTTTCSSCCCCCCCCCCCTTEEEEE
T ss_pred e-CC-------hhhHHHHHHhcCCCcEEEEEEcCHHHHHHHHHHhhcccccccchhhHhcCCcEEE
Confidence 3 22 13688999999999999987632 2334456543322 125898764
No 150
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.37 E-value=3.6e-13 Score=116.39 Aligned_cols=109 Identities=15% Similarity=0.092 Sum_probs=78.7
Q ss_pred CCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHH----HHHhcCCCCCCeEEEEccccchhhcCCC
Q 042119 127 GVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARS----IVASDAEFEGRMKFLTRDIMEVKEQLGE 202 (286)
Q Consensus 127 ~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~----~~~~~g~l~~~i~f~~~D~~~~~~~l~~ 202 (286)
.+.++.+|||||||+ |..+..+|+ ..|+++|+|+|+|+++++.+.+ .....+ + ++++|+++|+.+++...+.
T Consensus 24 ~~~~~~~vLDiGcG~-G~~~~~la~-~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~-~-~~v~~~~~d~~~l~~~~~~ 99 (218)
T 3mq2_A 24 RSQYDDVVLDVGTGD-GKHPYKVAR-QNPSRLVVALDADKSRMEKISAKAAAKPAKGG-L-PNLLYLWATAERLPPLSGV 99 (218)
T ss_dssp HTTSSEEEEEESCTT-CHHHHHHHH-HCTTEEEEEEESCGGGGHHHHHHHTSCGGGTC-C-TTEEEEECCSTTCCSCCCE
T ss_pred hccCCCEEEEecCCC-CHHHHHHHH-HCCCCEEEEEECCHHHHHHHHHHHHHhhhhcC-C-CceEEEecchhhCCCCCCC
Confidence 357789999999996 666777887 4789999999999998885433 333455 2 5899999999887664444
Q ss_pred cceeehhhhcc----CChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 203 YDCIFLAALVG----MSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 203 fD~V~~aalvg----~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
|.|++....+ ...++..++++++.+.|||||.+++..
T Consensus 100 -d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 140 (218)
T 3mq2_A 100 -GELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVAL 140 (218)
T ss_dssp -EEEEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEE
T ss_pred -CEEEEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEe
Confidence 6665221000 001233689999999999999999854
No 151
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.37 E-value=1.3e-12 Score=117.65 Aligned_cols=108 Identities=18% Similarity=0.198 Sum_probs=88.4
Q ss_pred hcCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcc
Q 042119 125 ENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYD 204 (286)
Q Consensus 125 ~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD 204 (286)
...+.++.+|||+|||+ |..++.++++..++.+|+++|+|+++++.|++.++..| +.++++++++|+.+. .+.+.||
T Consensus 107 ~~~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~-~~~~~~D 183 (277)
T 1o54_A 107 MLDVKEGDRIIDTGVGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWG-LIERVTIKVRDISEG-FDEKDVD 183 (277)
T ss_dssp HTTCCTTCEEEEECCTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTT-CGGGEEEECCCGGGC-CSCCSEE
T ss_pred HhCCCCCCEEEEECCcC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcC-CCCCEEEEECCHHHc-ccCCccC
Confidence 34567889999999997 56667777743568999999999999999999999988 667899999999775 2224799
Q ss_pred eeehhhhccCChhHHHHHHHHHHhhccCCcEEEEeec
Q 042119 205 CIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRSA 241 (286)
Q Consensus 205 ~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~~ 241 (286)
+|+.+. +...++++++.+.|+|||.+++-..
T Consensus 184 ~V~~~~------~~~~~~l~~~~~~L~pgG~l~~~~~ 214 (277)
T 1o54_A 184 ALFLDV------PDPWNYIDKCWEALKGGGRFATVCP 214 (277)
T ss_dssp EEEECC------SCGGGTHHHHHHHEEEEEEEEEEES
T ss_pred EEEECC------cCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 999742 3445799999999999999998764
No 152
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.37 E-value=5.8e-12 Score=117.67 Aligned_cols=116 Identities=16% Similarity=0.118 Sum_probs=92.0
Q ss_pred HhcCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCc
Q 042119 124 SENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEY 203 (286)
Q Consensus 124 ~~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~f 203 (286)
...+..++.+|||+|||+ |.-++.+|....++.+|+|+|+|+.+++.|+++++..| +. +++|.++|+.+++.....|
T Consensus 197 ~~~~~~~~~~vLD~gcGs-G~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g-~~-~i~~~~~D~~~~~~~~~~~ 273 (354)
T 3tma_A 197 RLADARPGMRVLDPFTGS-GTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASG-LS-WIRFLRADARHLPRFFPEV 273 (354)
T ss_dssp HHTTCCTTCCEEESSCTT-SHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTT-CT-TCEEEECCGGGGGGTCCCC
T ss_pred HHhCCCCCCEEEeCCCCc-CHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcC-CC-ceEEEeCChhhCccccCCC
Confidence 344567889999999997 55567777632267999999999999999999999999 56 9999999999987766779
Q ss_pred ceeehhhhccCC-------hhHHHHHHHHHHhhccCCcEEEEeecC
Q 042119 204 DCIFLAALVGMS-------KEEKLTILGHIRKYMKDGGILLVRSAK 242 (286)
Q Consensus 204 D~V~~aalvg~~-------~~~k~~vl~~l~~~l~pgg~lv~r~~~ 242 (286)
|+|+..---|.. ...+.++++.+.+.|+|||.+++-+.+
T Consensus 274 D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~ 319 (354)
T 3tma_A 274 DRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLR 319 (354)
T ss_dssp SEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESC
T ss_pred CEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 999874321211 123468999999999999999998754
No 153
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.37 E-value=1.2e-12 Score=114.31 Aligned_cols=91 Identities=11% Similarity=0.132 Sum_probs=75.8
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEcccc-chhhc-CCCccee
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIM-EVKEQ-LGEYDCI 206 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~-~~~~~-l~~fD~V 206 (286)
.++.+|||||||+ |..+..+++ .+++|+++|+|+.+++.|++. . .+++|+++|+. .++.. .+.||+|
T Consensus 47 ~~~~~vLDiGcG~-G~~~~~l~~---~~~~v~~vD~s~~~~~~a~~~----~---~~~~~~~~d~~~~~~~~~~~~fD~v 115 (226)
T 3m33_A 47 TPQTRVLEAGCGH-GPDAARFGP---QAARWAAYDFSPELLKLARAN----A---PHADVYEWNGKGELPAGLGAPFGLI 115 (226)
T ss_dssp CTTCEEEEESCTT-SHHHHHHGG---GSSEEEEEESCHHHHHHHHHH----C---TTSEEEECCSCSSCCTTCCCCEEEE
T ss_pred CCCCeEEEeCCCC-CHHHHHHHH---cCCEEEEEECCHHHHHHHHHh----C---CCceEEEcchhhccCCcCCCCEEEE
Confidence 6789999999997 667788888 388999999999999999997 2 47999999994 44444 4579999
Q ss_pred ehhhhccCChhHHHHHHHHHHhhccCCcEEE
Q 042119 207 FLAALVGMSKEEKLTILGHIRKYMKDGGILL 237 (286)
Q Consensus 207 ~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv 237 (286)
+.. .+...++.++.+.|||||.++
T Consensus 116 ~~~-------~~~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 116 VSR-------RGPTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp EEE-------SCCSGGGGGHHHHEEEEEEEE
T ss_pred EeC-------CCHHHHHHHHHHHcCCCcEEE
Confidence 865 244578999999999999998
No 154
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.37 E-value=6.6e-13 Score=109.42 Aligned_cols=102 Identities=10% Similarity=0.126 Sum_probs=80.1
Q ss_pred CCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhc----CCCcce
Q 042119 130 QPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQ----LGEYDC 205 (286)
Q Consensus 130 ~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~----l~~fD~ 205 (286)
++.+|||+|||+ |..++.+++ .+.+|+++|+|+++++.|++.+...| + +++|+++|+.+.... .+.||+
T Consensus 41 ~~~~vLD~GcG~-G~~~~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~~-~--~~~~~~~d~~~~~~~~~~~~~~~D~ 113 (171)
T 1ws6_A 41 RRGRFLDPFAGS-GAVGLEAAS---EGWEAVLVEKDPEAVRLLKENVRRTG-L--GARVVALPVEVFLPEAKAQGERFTV 113 (171)
T ss_dssp TCCEEEEETCSS-CHHHHHHHH---TTCEEEEECCCHHHHHHHHHHHHHHT-C--CCEEECSCHHHHHHHHHHTTCCEEE
T ss_pred CCCeEEEeCCCc-CHHHHHHHH---CCCeEEEEeCCHHHHHHHHHHHHHcC-C--ceEEEeccHHHHHHhhhccCCceEE
Confidence 678999999996 666777887 46669999999999999999999988 4 899999999874322 136999
Q ss_pred eehhhhccCChhHHHHHHHHHH--hhccCCcEEEEeec
Q 042119 206 IFLAALVGMSKEEKLTILGHIR--KYMKDGGILLVRSA 241 (286)
Q Consensus 206 V~~aalvg~~~~~k~~vl~~l~--~~l~pgg~lv~r~~ 241 (286)
|+.....+ ....++++.+. +.|+|||.+++...
T Consensus 114 i~~~~~~~---~~~~~~~~~~~~~~~L~~gG~~~~~~~ 148 (171)
T 1ws6_A 114 AFMAPPYA---MDLAALFGELLASGLVEAGGLYVLQHP 148 (171)
T ss_dssp EEECCCTT---SCTTHHHHHHHHHTCEEEEEEEEEEEE
T ss_pred EEECCCCc---hhHHHHHHHHHhhcccCCCcEEEEEeC
Confidence 99764222 23345666676 99999999998763
No 155
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.37 E-value=1.4e-12 Score=113.34 Aligned_cols=105 Identities=20% Similarity=0.192 Sum_probs=82.6
Q ss_pred CCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCC----CCCeEEEEccccchhhcCCCc
Q 042119 128 VVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEF----EGRMKFLTRDIMEVKEQLGEY 203 (286)
Q Consensus 128 ~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l----~~~i~f~~~D~~~~~~~l~~f 203 (286)
+.++.+||+||||+ |..+..+++...+..+|+++|+|+.+++.|++.+...| + .++++++++|+.+.....+.|
T Consensus 75 ~~~~~~vLDiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~v~~~~~d~~~~~~~~~~f 152 (226)
T 1i1n_A 75 LHEGAKALDVGSGS-GILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDD-PTLLSSGRVQLVVGDGRMGYAEEAPY 152 (226)
T ss_dssp SCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHC-THHHHTSSEEEEESCGGGCCGGGCCE
T ss_pred CCCCCEEEEEcCCc-CHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhc-ccccCCCcEEEEECCcccCcccCCCc
Confidence 57889999999997 55556777632355799999999999999999998866 3 368999999997654444579
Q ss_pred ceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEeec
Q 042119 204 DCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRSA 241 (286)
Q Consensus 204 D~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~~ 241 (286)
|+|+...... .+++++.+.|||||++++...
T Consensus 153 D~i~~~~~~~-------~~~~~~~~~LkpgG~lv~~~~ 183 (226)
T 1i1n_A 153 DAIHVGAAAP-------VVPQALIDQLKPGGRLILPVG 183 (226)
T ss_dssp EEEEECSBBS-------SCCHHHHHTEEEEEEEEEEES
T ss_pred CEEEECCchH-------HHHHHHHHhcCCCcEEEEEEe
Confidence 9998765431 245688999999999999753
No 156
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.37 E-value=4.7e-12 Score=108.97 Aligned_cols=109 Identities=18% Similarity=0.138 Sum_probs=84.3
Q ss_pred hcCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcc
Q 042119 125 ENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYD 204 (286)
Q Consensus 125 ~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD 204 (286)
.....++.+||+||||+ |..+..+++...++.+|+++|+|+++++.|++.+...| + ++++++++|+.+.....+.||
T Consensus 72 ~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~-~-~~v~~~~~d~~~~~~~~~~fD 148 (215)
T 2yxe_A 72 LLDLKPGMKVLEIGTGC-GYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLG-Y-DNVIVIVGDGTLGYEPLAPYD 148 (215)
T ss_dssp HTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHT-C-TTEEEEESCGGGCCGGGCCEE
T ss_pred hhCCCCCCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC-C-CCeEEEECCcccCCCCCCCee
Confidence 34567889999999996 66677777743345899999999999999999999888 3 569999999865333235799
Q ss_pred eeehhhhccCChhHHHHHHHHHHhhccCCcEEEEeecCc
Q 042119 205 CIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRSAKG 243 (286)
Q Consensus 205 ~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~~~g 243 (286)
+|+....... +.+++.+.|+|||++++....+
T Consensus 149 ~v~~~~~~~~-------~~~~~~~~L~pgG~lv~~~~~~ 180 (215)
T 2yxe_A 149 RIYTTAAGPK-------IPEPLIRQLKDGGKLLMPVGRY 180 (215)
T ss_dssp EEEESSBBSS-------CCHHHHHTEEEEEEEEEEESSS
T ss_pred EEEECCchHH-------HHHHHHHHcCCCcEEEEEECCC
Confidence 9997755432 1247899999999999876543
No 157
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.37 E-value=1.2e-12 Score=118.77 Aligned_cols=104 Identities=14% Similarity=0.053 Sum_probs=84.8
Q ss_pred CCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceee
Q 042119 128 VVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIF 207 (286)
Q Consensus 128 ~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~ 207 (286)
.+++++|||+|||++ .-++.+|+. .. .+|+|+|+|+++++.|+++++..| +.++++|+++|+.+... ...||+|+
T Consensus 123 ~~~~~~VLDlgcG~G-~~~~~la~~-~~-~~V~~vD~s~~~~~~a~~n~~~n~-~~~~v~~~~~D~~~~~~-~~~fD~Vi 197 (278)
T 2frn_A 123 AKPDELVVDMFAGIG-HLSLPIAVY-GK-AKVIAIEKDPYTFKFLVENIHLNK-VEDRMSAYNMDNRDFPG-ENIADRIL 197 (278)
T ss_dssp CCTTCEEEETTCTTT-TTHHHHHHH-TC-CEEEEECCCHHHHHHHHHHHHHTT-CTTTEEEECSCTTTCCC-CSCEEEEE
T ss_pred CCCCCEEEEecccCC-HHHHHHHHh-CC-CEEEEEECCHHHHHHHHHHHHHcC-CCceEEEEECCHHHhcc-cCCccEEE
Confidence 367899999999975 556777772 22 279999999999999999999999 67789999999988765 35799998
Q ss_pred hhhhccCChhHHHHHHHHHHhhccCCcEEEEeec
Q 042119 208 LAALVGMSKEEKLTILGHIRKYMKDGGILLVRSA 241 (286)
Q Consensus 208 ~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~~ 241 (286)
+... ....++++++.+.|+|||.+++.+.
T Consensus 198 ~~~p-----~~~~~~l~~~~~~LkpgG~l~~~~~ 226 (278)
T 2frn_A 198 MGYV-----VRTHEFIPKALSIAKDGAIIHYHNT 226 (278)
T ss_dssp ECCC-----SSGGGGHHHHHHHEEEEEEEEEEEE
T ss_pred ECCc-----hhHHHHHHHHHHHCCCCeEEEEEEe
Confidence 7532 2335789999999999999998763
No 158
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.37 E-value=2.5e-12 Score=110.25 Aligned_cols=109 Identities=17% Similarity=0.095 Sum_probs=83.6
Q ss_pred HHHHHHHHhcCCCCCCEEEEeccCCChhhHHHHHhhcCCCc-EEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccc
Q 042119 117 KLEYTILSENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTST-HFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIME 195 (286)
Q Consensus 117 ~~E~~~l~~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~-~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~ 195 (286)
+.+...+.+... ++.+|||||||++.++ ..+ +. +|+++|+|+++++.|++.. .+++++++|+.+
T Consensus 24 ~~~~~~l~~~~~-~~~~vLdiG~G~G~~~-~~l------~~~~v~~vD~s~~~~~~a~~~~-------~~~~~~~~d~~~ 88 (211)
T 2gs9_A 24 AEEERALKGLLP-PGESLLEVGAGTGYWL-RRL------PYPQKVGVEPSEAMLAVGRRRA-------PEATWVRAWGEA 88 (211)
T ss_dssp HHHHHHHHTTCC-CCSEEEEETCTTCHHH-HHC------CCSEEEEECCCHHHHHHHHHHC-------TTSEEECCCTTS
T ss_pred HHHHHHHHHhcC-CCCeEEEECCCCCHhH-HhC------CCCeEEEEeCCHHHHHHHHHhC-------CCcEEEEccccc
Confidence 334455655544 8899999999975433 322 56 9999999999999999874 368999999988
Q ss_pred hhhcCCCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEeec
Q 042119 196 VKEQLGEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRSA 241 (286)
Q Consensus 196 ~~~~l~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~~ 241 (286)
++...+.||+|+....+.+ .++..++++++.+.|||||.+++...
T Consensus 89 ~~~~~~~fD~v~~~~~l~~-~~~~~~~l~~~~~~L~pgG~l~i~~~ 133 (211)
T 2gs9_A 89 LPFPGESFDVVLLFTTLEF-VEDVERVLLEARRVLRPGGALVVGVL 133 (211)
T ss_dssp CCSCSSCEEEEEEESCTTT-CSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCCCcEEEEEEcChhhh-cCCHHHHHHHHHHHcCCCCEEEEEec
Confidence 7655567999987654422 24667899999999999999999763
No 159
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.36 E-value=7.5e-13 Score=116.75 Aligned_cols=105 Identities=13% Similarity=0.061 Sum_probs=76.7
Q ss_pred CCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCC-hHHHHHH---HHHHHhcCCCCCCeEEEEccccchhhcC-CC
Q 042119 128 VVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDID-EAANDVA---RSIVASDAEFEGRMKFLTRDIMEVKEQL-GE 202 (286)
Q Consensus 128 ~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid-~~ai~~A---r~~~~~~g~l~~~i~f~~~D~~~~~~~l-~~ 202 (286)
..++.+|||||||+ |..++.+|+ ..++++|+|||+| +.+++.| ++.+.+.|. .+++|+++|+.+++... +.
T Consensus 22 ~~~~~~vLDiGCG~-G~~~~~la~-~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~--~~v~~~~~d~~~l~~~~~d~ 97 (225)
T 3p2e_A 22 GQFDRVHIDLGTGD-GRNIYKLAI-NDQNTFYIGIDPVKENLFDISKKIIKKPSKGGL--SNVVFVIAAAESLPFELKNI 97 (225)
T ss_dssp TTCSEEEEEETCTT-SHHHHHHHH-TCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCC--SSEEEECCBTTBCCGGGTTC
T ss_pred CCCCCEEEEEeccC-cHHHHHHHH-hCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCC--CCeEEEEcCHHHhhhhccCe
Confidence 36788999999996 666778886 3689999999999 5555555 888877883 57999999998875422 23
Q ss_pred cceeehhhhccCCh------hHHHHHHHHHHhhccCCcEEEE
Q 042119 203 YDCIFLAALVGMSK------EEKLTILGHIRKYMKDGGILLV 238 (286)
Q Consensus 203 fD~V~~aalvg~~~------~~k~~vl~~l~~~l~pgg~lv~ 238 (286)
+|.|++.. .++. .+..+++.++++.|||||.+++
T Consensus 98 v~~i~~~~--~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 98 ADSISILF--PWGTLLEYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp EEEEEEES--CCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred EEEEEEeC--CCcHHhhhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 45444321 1100 1124689999999999999998
No 160
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.36 E-value=3.3e-12 Score=111.89 Aligned_cols=106 Identities=15% Similarity=0.204 Sum_probs=87.5
Q ss_pred hcCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcc
Q 042119 125 ENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYD 204 (286)
Q Consensus 125 ~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD 204 (286)
.....++++||++|||+ |..++.++++ +.+|+++|+|+++++.|++..+..| +.+++++..+|+.+.......||
T Consensus 86 ~~~~~~~~~vldiG~G~-G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~D 160 (248)
T 2yvl_A 86 KLNLNKEKRVLEFGTGS-GALLAVLSEV---AGEVWTFEAVEEFYKTAQKNLKKFN-LGKNVKFFNVDFKDAEVPEGIFH 160 (248)
T ss_dssp HTTCCTTCEEEEECCTT-SHHHHHHHHH---SSEEEEECSCHHHHHHHHHHHHHTT-CCTTEEEECSCTTTSCCCTTCBS
T ss_pred hcCCCCCCEEEEeCCCc-cHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcC-CCCcEEEEEcChhhcccCCCccc
Confidence 34557889999999995 7777888882 8899999999999999999999888 67899999999977441234799
Q ss_pred eeehhhhccCChhHHHHHHHHHHhhccCCcEEEEeec
Q 042119 205 CIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRSA 241 (286)
Q Consensus 205 ~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~~ 241 (286)
+|+.+. ++...+++++.+.|+|||.+++-..
T Consensus 161 ~v~~~~------~~~~~~l~~~~~~L~~gG~l~~~~~ 191 (248)
T 2yvl_A 161 AAFVDV------REPWHYLEKVHKSLMEGAPVGFLLP 191 (248)
T ss_dssp EEEECS------SCGGGGHHHHHHHBCTTCEEEEEES
T ss_pred EEEECC------cCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 999642 2445789999999999999998764
No 161
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.36 E-value=2.3e-12 Score=115.48 Aligned_cols=110 Identities=15% Similarity=0.235 Sum_probs=88.1
Q ss_pred hcCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhc-CCCCCCeEEEEccccchhhcCCCc
Q 042119 125 ENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASD-AEFEGRMKFLTRDIMEVKEQLGEY 203 (286)
Q Consensus 125 ~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~-g~l~~~i~f~~~D~~~~~~~l~~f 203 (286)
...+.++.+|||+|||+ |..+..+++...++.+|+++|+|+++++.|++.++.. |.+.++++++++|+.+.+.+.+.|
T Consensus 94 ~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~~~~~~ 172 (280)
T 1i9g_A 94 EGDIFPGARVLEAGAGS-GALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELPDGSV 172 (280)
T ss_dssp HTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCCTTCE
T ss_pred HcCCCCCCEEEEEcccc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCCCCCce
Confidence 34567889999999996 5556677764456899999999999999999999887 413478999999998765444579
Q ss_pred ceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEeec
Q 042119 204 DCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRSA 241 (286)
Q Consensus 204 D~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~~ 241 (286)
|+|+.+. .+..++++++.+.|+|||.+++-..
T Consensus 173 D~v~~~~------~~~~~~l~~~~~~L~pgG~l~~~~~ 204 (280)
T 1i9g_A 173 DRAVLDM------LAPWEVLDAVSRLLVAGGVLMVYVA 204 (280)
T ss_dssp EEEEEES------SCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred eEEEECC------cCHHHHHHHHHHhCCCCCEEEEEeC
Confidence 9999742 2344799999999999999999753
No 162
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.36 E-value=1.1e-12 Score=117.09 Aligned_cols=100 Identities=9% Similarity=0.084 Sum_probs=81.6
Q ss_pred CCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCccee
Q 042119 127 GVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCI 206 (286)
Q Consensus 127 ~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V 206 (286)
...++.+|||||||+ |..+..+++ ++++|+|+|+|+.+++.|++.. +++|+++|+.+++...+.||+|
T Consensus 31 ~~~~~~~vLDiGcG~-G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~--------~~~~~~~d~~~~~~~~~~fD~v 98 (261)
T 3ege_A 31 NLPKGSVIADIGAGT-GGYSVALAN---QGLFVYAVEPSIVMRQQAVVHP--------QVEWFTGYAENLALPDKSVDGV 98 (261)
T ss_dssp CCCTTCEEEEETCTT-SHHHHHHHT---TTCEEEEECSCHHHHHSSCCCT--------TEEEECCCTTSCCSCTTCBSEE
T ss_pred CCCCCCEEEEEcCcc-cHHHHHHHh---CCCEEEEEeCCHHHHHHHHhcc--------CCEEEECchhhCCCCCCCEeEE
Confidence 457889999999996 667788887 8899999999999988876642 6999999998877655689999
Q ss_pred ehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 207 FLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 207 ~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
+....+++ .++..++++++.+.|| ||.+++-+
T Consensus 99 ~~~~~l~~-~~~~~~~l~~~~~~Lk-gG~~~~~~ 130 (261)
T 3ege_A 99 ISILAIHH-FSHLEKSFQEMQRIIR-DGTIVLLT 130 (261)
T ss_dssp EEESCGGG-CSSHHHHHHHHHHHBC-SSCEEEEE
T ss_pred EEcchHhh-ccCHHHHHHHHHHHhC-CcEEEEEE
Confidence 97654422 2577789999999999 99776655
No 163
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.36 E-value=4.8e-12 Score=116.99 Aligned_cols=111 Identities=22% Similarity=0.214 Sum_probs=86.2
Q ss_pred CCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCccee
Q 042119 127 GVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCI 206 (286)
Q Consensus 127 ~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V 206 (286)
.+.++.+|||+||||++.| +.+|+....+++|+++|+|+.+++.+++++++.| + .+++++++|+.+++...+.||+|
T Consensus 115 ~~~~g~~VLDlg~G~G~~t-~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g-~-~~v~~~~~D~~~~~~~~~~fD~I 191 (315)
T 1ixk_A 115 DPKPGEIVADMAAAPGGKT-SYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLG-V-LNVILFHSSSLHIGELNVEFDKI 191 (315)
T ss_dssp CCCTTCEEEECCSSCSHHH-HHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHT-C-CSEEEESSCGGGGGGGCCCEEEE
T ss_pred CCCCCCEEEEeCCCCCHHH-HHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhC-C-CeEEEEECChhhcccccccCCEE
Confidence 5678899999999997665 4566532346899999999999999999999999 4 47999999998876544579999
Q ss_pred ehhhh---ccC---Chh---------------HHHHHHHHHHhhccCCcEEEEee
Q 042119 207 FLAAL---VGM---SKE---------------EKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 207 ~~aal---vg~---~~~---------------~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
++++- .|+ +.+ ...++++++.+.|||||++++.+
T Consensus 192 l~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~st 246 (315)
T 1ixk_A 192 LLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYST 246 (315)
T ss_dssp EEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEe
Confidence 97531 111 111 12589999999999999999964
No 164
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.36 E-value=1.5e-12 Score=118.46 Aligned_cols=107 Identities=17% Similarity=0.227 Sum_probs=83.3
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhc--CCC--------CCCeEEEEccccchhh
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASD--AEF--------EGRMKFLTRDIMEVKE 198 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~--g~l--------~~~i~f~~~D~~~~~~ 198 (286)
..+++||+||||+ |..+..+++ + +..+|+++|+|+++++.|++.+ .. + + ..+++++++|+.+...
T Consensus 74 ~~~~~VLdiG~G~-G~~~~~l~~-~-~~~~v~~vDid~~~i~~ar~~~-~~~~~-l~~~~~~~~~~~v~~~~~D~~~~l~ 148 (281)
T 1mjf_A 74 PKPKRVLVIGGGD-GGTVREVLQ-H-DVDEVIMVEIDEDVIMVSKDLI-KIDNG-LLEAMLNGKHEKAKLTIGDGFEFIK 148 (281)
T ss_dssp SCCCEEEEEECTT-SHHHHHHTT-S-CCSEEEEEESCHHHHHHHHHHT-CTTTT-HHHHHHTTCCSSEEEEESCHHHHHH
T ss_pred CCCCeEEEEcCCc-CHHHHHHHh-C-CCCEEEEEECCHHHHHHHHHHH-hhccc-cccccccCCCCcEEEEECchHHHhc
Confidence 4678999999996 677788887 3 6789999999999999999987 44 3 2 4689999999977543
Q ss_pred cCCCcceeehhhhccCCh-hH--HHHHHHHHHhhccCCcEEEEee
Q 042119 199 QLGEYDCIFLAALVGMSK-EE--KLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 199 ~l~~fD~V~~aalvg~~~-~~--k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
..+.||+|+.+..-.... .. ..++++.+.+.|+|||++++..
T Consensus 149 ~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 193 (281)
T 1mjf_A 149 NNRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA 193 (281)
T ss_dssp HCCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 335799999875421111 11 2579999999999999999975
No 165
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.36 E-value=1.3e-12 Score=120.18 Aligned_cols=110 Identities=16% Similarity=0.292 Sum_probs=81.3
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcC--CC-CCCeEEEEccccchhhc-CCCcc
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDA--EF-EGRMKFLTRDIMEVKEQ-LGEYD 204 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g--~l-~~~i~f~~~D~~~~~~~-l~~fD 204 (286)
..+++||+||||. |..+..+++ +.+..+|+++|+|+++++.|++.+...+ .+ ..+++++++|+.+.... .+.||
T Consensus 82 ~~~~~VLdiG~G~-G~~~~~l~~-~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD 159 (294)
T 3adn_A 82 GHAKHVLIIGGGD-GAMLREVTR-HKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFD 159 (294)
T ss_dssp TTCCEEEEESCTT-CHHHHHHHT-CTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEE
T ss_pred CCCCEEEEEeCCh-hHHHHHHHh-CCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCcc
Confidence 4679999999996 666677777 4567899999999999999999987542 01 35899999999876543 34799
Q ss_pred eeehhhhccCChhHH---HHHHHHHHhhccCCcEEEEee
Q 042119 205 CIFLAALVGMSKEEK---LTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 205 ~V~~aalvg~~~~~k---~~vl~~l~~~l~pgg~lv~r~ 240 (286)
+|+.+..-....... .++++.+.+.|+|||++++..
T Consensus 160 vIi~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 160 VIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp EEEECC----------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEec
Confidence 999865432111111 579999999999999999975
No 166
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.35 E-value=4.1e-12 Score=114.88 Aligned_cols=110 Identities=13% Similarity=0.100 Sum_probs=86.5
Q ss_pred CCCCCCEEEEeccCCChhhHHHHHhhcCCC-cEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhc----CC
Q 042119 127 GVVQPKKVAFVGSGPMPLTSIIMAKHHLTS-THFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQ----LG 201 (286)
Q Consensus 127 ~~~~~~~VL~IG~G~lp~tai~lA~~~~~g-~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~----l~ 201 (286)
.+.++.+|||+||||++.|. .+|+ ..++ ++|+++|+|+.+++.+++++++.| + .+++++++|+.++... .+
T Consensus 80 ~~~~g~~VLDlgaG~G~~t~-~la~-~~~~~~~v~avD~~~~~l~~~~~~~~~~g-~-~~v~~~~~D~~~~~~~~~~~~~ 155 (274)
T 3ajd_A 80 NPREDDFILDMCAAPGGKTT-HLAQ-LMKNKGTIVAVEISKTRTKALKSNINRMG-V-LNTIIINADMRKYKDYLLKNEI 155 (274)
T ss_dssp CCCTTCEEEETTCTTCHHHH-HHHH-HTTTCSEEEEEESCHHHHHHHHHHHHHTT-C-CSEEEEESCHHHHHHHHHHTTC
T ss_pred CCCCcCEEEEeCCCccHHHH-HHHH-HcCCCCEEEEECCCHHHHHHHHHHHHHhC-C-CcEEEEeCChHhcchhhhhccc
Confidence 45788999999999977664 4555 2455 899999999999999999999999 4 4899999999887652 45
Q ss_pred Ccceeehhhhc---cCC--------------hhHHHHHHHHHHhhccCCcEEEEee
Q 042119 202 EYDCIFLAALV---GMS--------------KEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 202 ~fD~V~~aalv---g~~--------------~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
.||.|+.++-- |.- .+...++++++.+.|||||++++.+
T Consensus 156 ~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~st 211 (274)
T 3ajd_A 156 FFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYST 211 (274)
T ss_dssp CEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence 79999976311 110 0234689999999999999999965
No 167
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.35 E-value=4.5e-12 Score=114.91 Aligned_cols=107 Identities=14% Similarity=0.195 Sum_probs=78.7
Q ss_pred hcCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhc-CCCc
Q 042119 125 ENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQ-LGEY 203 (286)
Q Consensus 125 ~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~-l~~f 203 (286)
.....++.+|||||||+ |..++.+|+ .|++|+++|+|++|++.|++.+.... -.+.+...+.. ...+ .+.|
T Consensus 40 ~l~l~~g~~VLDlGcGt-G~~a~~La~---~g~~V~gvD~S~~ml~~Ar~~~~~~~---v~~~~~~~~~~-~~~~~~~~f 111 (261)
T 3iv6_A 40 LENIVPGSTVAVIGAST-RFLIEKALE---RGASVTVFDFSQRMCDDLAEALADRC---VTIDLLDITAE-IPKELAGHF 111 (261)
T ss_dssp TTTCCTTCEEEEECTTC-HHHHHHHHH---TTCEEEEEESCHHHHHHHHHHTSSSC---CEEEECCTTSC-CCGGGTTCC
T ss_pred hcCCCCcCEEEEEeCcc-hHHHHHHHh---cCCEEEEEECCHHHHHHHHHHHHhcc---ceeeeeecccc-cccccCCCc
Confidence 44567889999999996 777888998 68999999999999999999854331 12233222210 0112 2479
Q ss_pred ceeehhhhc-cCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 204 DCIFLAALV-GMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 204 D~V~~aalv-g~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
|+|+....+ .+..++...++.++.+.+ |||++++..
T Consensus 112 D~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~ 148 (261)
T 3iv6_A 112 DFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASV 148 (261)
T ss_dssp SEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEE
T ss_pred cEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEe
Confidence 999976554 346677788999999999 999999864
No 168
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.35 E-value=6.6e-12 Score=114.78 Aligned_cols=110 Identities=14% Similarity=0.053 Sum_probs=83.2
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCC-----CCCCeEEEEccccchh----hc
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAE-----FEGRMKFLTRDIMEVK----EQ 199 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~-----l~~~i~f~~~D~~~~~----~~ 199 (286)
.++.+|||||||++.++ ..+++ .++.+|+++|+|+++++.|++.....+. ...+++|+++|+.+.+ ..
T Consensus 33 ~~~~~VLDlGcG~G~~~-~~l~~--~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 109 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDL-LKWKK--GRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFR 109 (313)
T ss_dssp --CCEEEEETCTTTTTH-HHHHH--TTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCS
T ss_pred CCCCEEEEECCCCcHHH-HHHHh--cCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcc
Confidence 47789999999975554 55665 2688999999999999999998876520 1247999999998764 21
Q ss_pred --CCCcceeehhhhccC---ChhHHHHHHHHHHhhccCCcEEEEeec
Q 042119 200 --LGEYDCIFLAALVGM---SKEEKLTILGHIRKYMKDGGILLVRSA 241 (286)
Q Consensus 200 --l~~fD~V~~aalvg~---~~~~k~~vl~~l~~~l~pgg~lv~r~~ 241 (286)
.+.||+|+....+++ +.++...++.++.+.|+|||.+++...
T Consensus 110 ~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 156 (313)
T 3bgv_A 110 DPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTP 156 (313)
T ss_dssp STTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred cCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 237999986544322 445667999999999999999998753
No 169
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.35 E-value=4.5e-12 Score=112.32 Aligned_cols=108 Identities=15% Similarity=0.205 Sum_probs=81.3
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhc--------CCCCCCeEEEEccccc-hh--
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASD--------AEFEGRMKFLTRDIME-VK-- 197 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~--------g~l~~~i~f~~~D~~~-~~-- 197 (286)
.++.+|||||||+ |..++.+|+ ..++.+|+|+|+|+.+++.|++.++.. | + .+++++++|+.+ ++
T Consensus 48 ~~~~~vLDiGcG~-G~~~~~la~-~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~-~-~nv~~~~~D~~~~l~~~ 123 (246)
T 2vdv_E 48 TKKVTIADIGCGF-GGLMIDLSP-AFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHG-F-QNINVLRGNAMKFLPNF 123 (246)
T ss_dssp SCCEEEEEETCTT-SHHHHHHHH-HSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCST-T-TTEEEEECCTTSCGGGT
T ss_pred CCCCEEEEEcCCC-CHHHHHHHH-hCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccC-C-CcEEEEeccHHHHHHHh
Confidence 5778999999997 555677777 367889999999999999999998876 7 3 589999999987 33
Q ss_pred hcCCCcceeehhhhccCChhH-------HHHHHHHHHhhccCCcEEEEee
Q 042119 198 EQLGEYDCIFLAALVGMSKEE-------KLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 198 ~~l~~fD~V~~aalvg~~~~~-------k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
.+...||.|++..--.+.+.. ..+++..+.+.|+|||.+++.+
T Consensus 124 ~~~~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 124 FEKGQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTIT 173 (246)
T ss_dssp SCTTCEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccccccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEe
Confidence 233568888743210110000 0379999999999999999864
No 170
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.34 E-value=5.4e-12 Score=116.27 Aligned_cols=106 Identities=17% Similarity=0.189 Sum_probs=83.7
Q ss_pred hcCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcc
Q 042119 125 ENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYD 204 (286)
Q Consensus 125 ~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD 204 (286)
...+.++.+|||||||+ |..++.+|+....+.+|+++|+|+++++.|++.++..| + .+++|+++|+.+.....+.||
T Consensus 70 ~l~~~~~~~VLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g-~-~~v~~~~~d~~~~~~~~~~fD 146 (317)
T 1dl5_A 70 WVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLG-I-ENVIFVCGDGYYGVPEFSPYD 146 (317)
T ss_dssp HTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTT-C-CSEEEEESCGGGCCGGGCCEE
T ss_pred hcCCCCcCEEEEecCCc-hHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcC-C-CCeEEEECChhhccccCCCeE
Confidence 44567889999999997 56667788742225789999999999999999999999 4 459999999987544446899
Q ss_pred eeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 205 CIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 205 ~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
+|+.......- .+.+.+.|||||++++..
T Consensus 147 ~Iv~~~~~~~~-------~~~~~~~LkpgG~lvi~~ 175 (317)
T 1dl5_A 147 VIFVTVGVDEV-------PETWFTQLKEGGRVIVPI 175 (317)
T ss_dssp EEEECSBBSCC-------CHHHHHHEEEEEEEEEEB
T ss_pred EEEEcCCHHHH-------HHHHHHhcCCCcEEEEEE
Confidence 99977654221 146888999999999965
No 171
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.34 E-value=4e-12 Score=110.60 Aligned_cols=107 Identities=14% Similarity=0.141 Sum_probs=82.3
Q ss_pred cCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchh--hcC-CC
Q 042119 126 NGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVK--EQL-GE 202 (286)
Q Consensus 126 ~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~--~~l-~~ 202 (286)
..+.++.+|||+|||+ |..++.+|++..++.+|+++|+|+++++.+++.++.. .+++|+++|+.+.. ..+ +.
T Consensus 69 ~~~~~~~~vLDlG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~----~~v~~~~~d~~~~~~~~~~~~~ 143 (227)
T 1g8a_A 69 FPIKPGKSVLYLGIAS-GTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER----RNIVPILGDATKPEEYRALVPK 143 (227)
T ss_dssp CCCCTTCEEEEETTTS-TTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC----TTEEEEECCTTCGGGGTTTCCC
T ss_pred cCCCCCCEEEEEeccC-CHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc----CCCEEEEccCCCcchhhcccCC
Confidence 3357889999999997 6677888874345689999999999999999987643 57999999997732 122 46
Q ss_pred cceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 203 YDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 203 fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
||+|+.+.. .......++.++.+.|+|||.+++..
T Consensus 144 ~D~v~~~~~---~~~~~~~~l~~~~~~LkpgG~l~~~~ 178 (227)
T 1g8a_A 144 VDVIFEDVA---QPTQAKILIDNAEVYLKRGGYGMIAV 178 (227)
T ss_dssp EEEEEECCC---STTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ceEEEECCC---CHhHHHHHHHHHHHhcCCCCEEEEEE
Confidence 999996543 12333455999999999999998863
No 172
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.33 E-value=4.6e-12 Score=120.15 Aligned_cols=112 Identities=13% Similarity=0.164 Sum_probs=86.2
Q ss_pred hcCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCC--CeEEEEccccchhhcCCC
Q 042119 125 ENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEG--RMKFLTRDIMEVKEQLGE 202 (286)
Q Consensus 125 ~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~--~i~f~~~D~~~~~~~l~~ 202 (286)
.....++.+|||+|||+ |..++.+++ ..|+.+|+++|+|+.+++.|++++...| +.+ +++|+++|+.+. ...+.
T Consensus 217 ~l~~~~~~~VLDlGcG~-G~~s~~la~-~~p~~~V~gvD~s~~al~~Ar~n~~~ng-l~~~~~v~~~~~D~~~~-~~~~~ 292 (375)
T 4dcm_A 217 HLPENLEGEIVDLGCGN-GVIGLTLLD-KNPQAKVVFVDESPMAVASSRLNVETNM-PEALDRCEFMINNALSG-VEPFR 292 (375)
T ss_dssp TCCCSCCSEEEEETCTT-CHHHHHHHH-HCTTCEEEEEESCHHHHHHHHHHHHHHC-GGGGGGEEEEECSTTTT-CCTTC
T ss_pred hCcccCCCeEEEEeCcc-hHHHHHHHH-HCCCCEEEEEECcHHHHHHHHHHHHHcC-CCcCceEEEEechhhcc-CCCCC
Confidence 34445668999999996 566677887 4789999999999999999999999988 554 588999999762 23347
Q ss_pred cceeehhhhcc----CChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 203 YDCIFLAALVG----MSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 203 fD~V~~aalvg----~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
||+|+..-..+ .......++++++.+.|+|||.+++..
T Consensus 293 fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~ 334 (375)
T 4dcm_A 293 FNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVA 334 (375)
T ss_dssp EEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 99998643221 112344579999999999999998854
No 173
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.33 E-value=3.4e-12 Score=117.77 Aligned_cols=109 Identities=19% Similarity=0.280 Sum_probs=83.7
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHh--cCCC-CCCeEEEEccccchhhc-CCCcc
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVAS--DAEF-EGRMKFLTRDIMEVKEQ-LGEYD 204 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~--~g~l-~~~i~f~~~D~~~~~~~-l~~fD 204 (286)
..+++||+||||. |..+..+++ +.+..+|+++|+|+++++.|++.+.. .| + ..+++++++|+.+.... .+.||
T Consensus 94 ~~~~~VLdiG~G~-G~~~~~l~~-~~~~~~v~~vDid~~~i~~ar~~~~~~~~~-~~~~rv~v~~~Da~~~l~~~~~~fD 170 (304)
T 2o07_A 94 PNPRKVLIIGGGD-GGVLREVVK-HPSVESVVQCEIDEDVIQVSKKFLPGMAIG-YSSSKLTLHVGDGFEFMKQNQDAFD 170 (304)
T ss_dssp SSCCEEEEEECTT-SHHHHHHTT-CTTCCEEEEEESCHHHHHHHHHHCHHHHGG-GGCTTEEEEESCHHHHHHTCSSCEE
T ss_pred CCCCEEEEECCCc-hHHHHHHHH-cCCCCEEEEEECCHHHHHHHHHHhHHhhcc-cCCCcEEEEECcHHHHHhhCCCCce
Confidence 5679999999996 677788887 35678999999999999999998765 24 3 47899999999875432 35799
Q ss_pred eeehhhhccCCh---hHHHHHHHHHHhhccCCcEEEEee
Q 042119 205 CIFLAALVGMSK---EEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 205 ~V~~aalvg~~~---~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
+|+.+..-.... ....++++++.+.|+|||++++..
T Consensus 171 ~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 171 VIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp EEEEECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence 999875421111 123578999999999999999976
No 174
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.33 E-value=3.1e-12 Score=116.57 Aligned_cols=112 Identities=20% Similarity=0.273 Sum_probs=85.4
Q ss_pred CCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCC-C-CCCeEEEEccccchhhc-CCCcc
Q 042119 128 VVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAE-F-EGRMKFLTRDIMEVKEQ-LGEYD 204 (286)
Q Consensus 128 ~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~-l-~~~i~f~~~D~~~~~~~-l~~fD 204 (286)
...+++||+||||. |..+..+++ +.++.+|+++|+|+++++.|++.+...+. + ..+++++++|+.+.... .+.||
T Consensus 76 ~~~~~~VLdiG~G~-G~~~~~l~~-~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD 153 (283)
T 2i7c_A 76 SKEPKNVLVVGGGD-GGIIRELCK-YKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYD 153 (283)
T ss_dssp SSSCCEEEEEECTT-SHHHHHHTT-CTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEE
T ss_pred CCCCCeEEEEeCCc-CHHHHHHHH-cCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCce
Confidence 35679999999996 666677777 45678999999999999999998764320 1 36899999999875433 35799
Q ss_pred eeehhhhccCChhHH---HHHHHHHHhhccCCcEEEEeec
Q 042119 205 CIFLAALVGMSKEEK---LTILGHIRKYMKDGGILLVRSA 241 (286)
Q Consensus 205 ~V~~aalvg~~~~~k---~~vl~~l~~~l~pgg~lv~r~~ 241 (286)
+|+.+..-....... .++++.+.+.|+|||++++...
T Consensus 154 ~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 193 (283)
T 2i7c_A 154 VIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCE 193 (283)
T ss_dssp EEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECC
T ss_pred EEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECC
Confidence 999865422211222 5899999999999999999753
No 175
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.33 E-value=3.5e-12 Score=117.34 Aligned_cols=111 Identities=17% Similarity=0.195 Sum_probs=83.7
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhc--CCCCCCeEEEEccccchhhc--CCCcc
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASD--AEFEGRMKFLTRDIMEVKEQ--LGEYD 204 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~--g~l~~~i~f~~~D~~~~~~~--l~~fD 204 (286)
..+++||+||||. |..+..+++ +.+..+|+++|+|+++++.|++.+... +....+++++++|+.+.... .+.||
T Consensus 94 ~~~~~VLdiG~G~-G~~~~~l~~-~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD 171 (304)
T 3bwc_A 94 PKPERVLIIGGGD-GGVLREVLR-HGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYD 171 (304)
T ss_dssp SSCCEEEEEECTT-SHHHHHHHT-CTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEE
T ss_pred CCCCeEEEEcCCC-CHHHHHHHh-CCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCcee
Confidence 5779999999996 666777777 356789999999999999999987421 11246899999999887653 35799
Q ss_pred eeehhhhccCChhH-H--HHHHHHHHhhccCCcEEEEeec
Q 042119 205 CIFLAALVGMSKEE-K--LTILGHIRKYMKDGGILLVRSA 241 (286)
Q Consensus 205 ~V~~aalvg~~~~~-k--~~vl~~l~~~l~pgg~lv~r~~ 241 (286)
+|+.+......... . .++++++.+.|+|||++++...
T Consensus 172 vIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 211 (304)
T 3bwc_A 172 VVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGE 211 (304)
T ss_dssp EEEEECC---------CCHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecC
Confidence 99986543211111 1 5799999999999999999754
No 176
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.33 E-value=3.4e-12 Score=115.95 Aligned_cols=111 Identities=19% Similarity=0.243 Sum_probs=84.9
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhc--CCC-CCCeEEEEccccchhhc-CCCcc
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASD--AEF-EGRMKFLTRDIMEVKEQ-LGEYD 204 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~--g~l-~~~i~f~~~D~~~~~~~-l~~fD 204 (286)
..+++||+||||. |..+..+++ +.+..+|+++|+|+++++.|++.+... + + .++++++++|+.+.... -+.||
T Consensus 74 ~~~~~VLdiG~G~-G~~~~~l~~-~~~~~~v~~vEid~~~v~~ar~~~~~~~~~-~~~~rv~v~~~D~~~~l~~~~~~fD 150 (275)
T 1iy9_A 74 PNPEHVLVVGGGD-GGVIREILK-HPSVKKATLVDIDGKVIEYSKKFLPSIAGK-LDDPRVDVQVDDGFMHIAKSENQYD 150 (275)
T ss_dssp SSCCEEEEESCTT-CHHHHHHTT-CTTCSEEEEEESCHHHHHHHHHHCHHHHTT-TTSTTEEEEESCSHHHHHTCCSCEE
T ss_pred CCCCEEEEECCch-HHHHHHHHh-CCCCceEEEEECCHHHHHHHHHHhHhhccc-cCCCceEEEECcHHHHHhhCCCCee
Confidence 4679999999995 667777777 345689999999999999999987542 3 3 46999999999875433 24799
Q ss_pred eeehhhhccCChh---HHHHHHHHHHhhccCCcEEEEeecC
Q 042119 205 CIFLAALVGMSKE---EKLTILGHIRKYMKDGGILLVRSAK 242 (286)
Q Consensus 205 ~V~~aalvg~~~~---~k~~vl~~l~~~l~pgg~lv~r~~~ 242 (286)
+|+.+..-..... -..++++.+.+.|+|||++++....
T Consensus 151 ~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~ 191 (275)
T 1iy9_A 151 VIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDN 191 (275)
T ss_dssp EEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCC
T ss_pred EEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 9998754311111 0257999999999999999998643
No 177
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.32 E-value=3.9e-12 Score=117.62 Aligned_cols=150 Identities=17% Similarity=0.174 Sum_probs=100.5
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhc--CCC-CCCeEEEEccccchhh-cCCCcc
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASD--AEF-EGRMKFLTRDIMEVKE-QLGEYD 204 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~--g~l-~~~i~f~~~D~~~~~~-~l~~fD 204 (286)
..+++||+||||. |..+..+++ +.++.+|+++|+|+++++.|++.+... |.+ ..+++++++|+.+... ..+.||
T Consensus 76 ~~~~~VLdiG~G~-G~~~~~l~~-~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD 153 (314)
T 1uir_A 76 PEPKRVLIVGGGE-GATLREVLK-HPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYD 153 (314)
T ss_dssp SCCCEEEEEECTT-SHHHHHHTT-STTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEE
T ss_pred CCCCeEEEEcCCc-CHHHHHHHh-cCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCcc
Confidence 5678999999996 667777887 456789999999999999999987652 101 3689999999987533 335799
Q ss_pred eeehhhhccC---Ch-hH--HHHHHHHHHhhccCCcEEEEeecCcceeeeccc-CCc--ccc-cCcE---EEEEecCccc
Q 042119 205 CIFLAALVGM---SK-EE--KLTILGHIRKYMKDGGILLVRSAKGARAFLYPV-VVE--HDL-LDFE---VLSAVHPNDD 271 (286)
Q Consensus 205 ~V~~aalvg~---~~-~~--k~~vl~~l~~~l~pgg~lv~r~~~g~r~~lyp~-v~~--~~l-~gf~---~~~~~~P~~~ 271 (286)
+|+.+..... .. +. ..++++.+.+.|+|||++++....... ..+. ... ..+ .-|. ......|..+
T Consensus 154 ~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~--~~~~~~~~~~~~l~~~F~~v~~~~~~vP~~~ 231 (314)
T 1uir_A 154 VVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTGMILL--THHRVHPVVHRTVREAFRYVRSYKNHIPGFF 231 (314)
T ss_dssp EEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEEECC-----CHHHHHHHHHHTTCSEEEEEEEEEGGGT
T ss_pred EEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEccCccc--cCHHHHHHHHHHHHHHCCceEEEEEecCCCC
Confidence 9998754322 11 11 368999999999999999997532110 0010 000 011 1232 2334457766
Q ss_pred ceeeeEEEeec
Q 042119 272 VINSVVLVRNS 282 (286)
Q Consensus 272 vinsvi~~r~~ 282 (286)
-.|.++++.|+
T Consensus 232 g~~~~~~as~~ 242 (314)
T 1uir_A 232 LNFGFLLASDA 242 (314)
T ss_dssp EEEEEEEEESS
T ss_pred CeEEEEEEECC
Confidence 56778888774
No 178
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.32 E-value=7.8e-12 Score=112.57 Aligned_cols=107 Identities=17% Similarity=0.221 Sum_probs=84.6
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeeh
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFL 208 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~ 208 (286)
.++.+|||||||+ |..++.+++ ..++++|+++|+|+++++.|+++++..| + .+++|+++|+.+... .+.||+|+.
T Consensus 108 ~~~~~vLDlG~Gs-G~~~~~la~-~~~~~~v~~vD~s~~~l~~a~~n~~~~~-~-~~v~~~~~d~~~~~~-~~~fD~Iv~ 182 (276)
T 2b3t_A 108 EQPCRILDLGTGT-GAIALALAS-ERPDCEIIAVDRMPDAVSLAQRNAQHLA-I-KNIHILQSDWFSALA-GQQFAMIVS 182 (276)
T ss_dssp SSCCEEEEETCTT-SHHHHHHHH-HCTTSEEEEECSSHHHHHHHHHHHHHHT-C-CSEEEECCSTTGGGT-TCCEEEEEE
T ss_pred cCCCEEEEecCCc-cHHHHHHHH-hCCCCEEEEEECCHHHHHHHHHHHHHcC-C-CceEEEEcchhhhcc-cCCccEEEE
Confidence 5678999999997 556677776 3689999999999999999999999999 4 479999999976432 357999986
Q ss_pred hhh-ccC------------C-----------hhHHHHHHHHHHhhccCCcEEEEee
Q 042119 209 AAL-VGM------------S-----------KEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 209 aal-vg~------------~-----------~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
..- ++. . .....++++++.+.|+|||.+++..
T Consensus 183 npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~ 238 (276)
T 2b3t_A 183 NPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEH 238 (276)
T ss_dssp CCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 410 100 0 0345789999999999999999864
No 179
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.32 E-value=6.7e-12 Score=117.17 Aligned_cols=107 Identities=18% Similarity=0.190 Sum_probs=84.5
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCC-CeEEEEccccchhhc----CCCc
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEG-RMKFLTRDIMEVKEQ----LGEY 203 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~-~i~f~~~D~~~~~~~----l~~f 203 (286)
.++.+|||+|||++ ..++.+|+ .|++|+++|+|+.+++.|+++++..| +.+ +++|+++|+.+.... ...|
T Consensus 152 ~~~~~VLDlgcGtG-~~sl~la~---~ga~V~~VD~s~~al~~a~~n~~~~g-l~~~~v~~i~~D~~~~l~~~~~~~~~f 226 (332)
T 2igt_A 152 DRPLKVLNLFGYTG-VASLVAAA---AGAEVTHVDASKKAIGWAKENQVLAG-LEQAPIRWICEDAMKFIQREERRGSTY 226 (332)
T ss_dssp SSCCEEEEETCTTC-HHHHHHHH---TTCEEEEECSCHHHHHHHHHHHHHHT-CTTSCEEEECSCHHHHHHHHHHHTCCB
T ss_pred CCCCcEEEcccccC-HHHHHHHH---cCCEEEEEECCHHHHHHHHHHHHHcC-CCccceEEEECcHHHHHHHHHhcCCCc
Confidence 46789999999975 55677777 57799999999999999999999999 555 599999999886543 3579
Q ss_pred ceeehhhh-ccC--------ChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 204 DCIFLAAL-VGM--------SKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 204 D~V~~aal-vg~--------~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
|+|+++-- .+. ..++..++++.+.+.|+|||.+++..
T Consensus 227 D~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~ 272 (332)
T 2igt_A 227 DIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLT 272 (332)
T ss_dssp SEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEE
T ss_pred eEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEE
Confidence 99987421 111 12456789999999999999977654
No 180
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.32 E-value=4.8e-12 Score=117.60 Aligned_cols=111 Identities=20% Similarity=0.281 Sum_probs=84.9
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhc--CCC-CCCeEEEEccccchhh-cCCCcc
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASD--AEF-EGRMKFLTRDIMEVKE-QLGEYD 204 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~--g~l-~~~i~f~~~D~~~~~~-~l~~fD 204 (286)
..+++||+||||+ |..+..+++ +.++.+|+++|+|+++++.|++.+... + + .++++++++|+.+... ..+.||
T Consensus 115 ~~~~~VLdiG~G~-G~~~~~l~~-~~~~~~v~~vDis~~~l~~ar~~~~~~~~~-~~~~~v~~~~~D~~~~l~~~~~~fD 191 (321)
T 2pt6_A 115 KEPKNVLVVGGGD-GGIIRELCK-YKSVENIDICEIDETVIEVSKIYFKNISCG-YEDKRVNVFIEDASKFLENVTNTYD 191 (321)
T ss_dssp SSCCEEEEEECTT-CHHHHHHTT-CTTCCEEEEEESCHHHHHHHHHHCTTTSGG-GGSTTEEEEESCHHHHHHHCCSCEE
T ss_pred CCCCEEEEEcCCc-cHHHHHHHH-cCCCCEEEEEECCHHHHHHHHHHHHhhccc-cCCCcEEEEEccHHHHHhhcCCCce
Confidence 4678999999996 666777877 456899999999999999999987652 2 2 3689999999977543 235799
Q ss_pred eeehhhhccCCh-hH--HHHHHHHHHhhccCCcEEEEeecC
Q 042119 205 CIFLAALVGMSK-EE--KLTILGHIRKYMKDGGILLVRSAK 242 (286)
Q Consensus 205 ~V~~aalvg~~~-~~--k~~vl~~l~~~l~pgg~lv~r~~~ 242 (286)
+|+.+..-.... .. ..++++.+.+.|+|||++++....
T Consensus 192 vIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 232 (321)
T 2pt6_A 192 VIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCES 232 (321)
T ss_dssp EEEEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECC
T ss_pred EEEECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 999765321111 11 158999999999999999997543
No 181
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.31 E-value=3e-12 Score=116.07 Aligned_cols=108 Identities=12% Similarity=0.187 Sum_probs=78.2
Q ss_pred CCCCEEEEeccCCChhhHHHH---HhhcCCCcEE--EEEeCChHHHHHHHHHHHhc-CCCCCCeE--EEEccccchhh--
Q 042119 129 VQPKKVAFVGSGPMPLTSIIM---AKHHLTSTHF--DNFDIDEAANDVARSIVASD-AEFEGRMK--FLTRDIMEVKE-- 198 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~l---A~~~~~g~~V--~~iDid~~ai~~Ar~~~~~~-g~l~~~i~--f~~~D~~~~~~-- 198 (286)
.++.+|||||||++.+|...+ +. ..++.+| +++|+|++|++.|++.++.. + + .+++ +..+|+.++..
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~-~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~-~-~~v~~~~~~~~~~~~~~~~ 127 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQA-QYPGVCINNEVVEPSAEQIAKYKELVAKTSN-L-ENVKFAWHKETSSEYQSRM 127 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHH-HSTTCEEEEEEECSCHHHHHHHHHHHHTCSS-C-TTEEEEEECSCHHHHHHHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHh-hCCCceeeEEEEeCCHHHHHHHHHHHHhccC-C-CcceEEEEecchhhhhhhh
Confidence 567899999999865553222 22 2467755 99999999999999998764 4 2 4454 55677765542
Q ss_pred ----cCCCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 199 ----QLGEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 199 ----~l~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
..+.||+|+....++ +.++..+++++++++|||||.+++..
T Consensus 128 ~~~~~~~~fD~V~~~~~l~-~~~d~~~~l~~~~r~LkpgG~l~i~~ 172 (292)
T 2aot_A 128 LEKKELQKWDFIHMIQMLY-YVKDIPATLKFFHSLLGTNAKMLIIV 172 (292)
T ss_dssp HTTTCCCCEEEEEEESCGG-GCSCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ccccCCCceeEEEEeeeee-ecCCHHHHHHHHHHHcCCCcEEEEEE
Confidence 245799998664432 23567789999999999999998854
No 182
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.31 E-value=8.7e-12 Score=116.63 Aligned_cols=107 Identities=21% Similarity=0.249 Sum_probs=84.1
Q ss_pred CCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCccee
Q 042119 127 GVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCI 206 (286)
Q Consensus 127 ~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V 206 (286)
...++++|||||||+ |..++.+|+ .+..+|+++|+|+ +++.|++.++..| +.++++++++|+.+++.+ +.||+|
T Consensus 47 ~~~~~~~VLDiGcGt-G~ls~~la~--~g~~~V~~vD~s~-~~~~a~~~~~~~~-l~~~v~~~~~d~~~~~~~-~~~D~I 120 (348)
T 2y1w_A 47 TDFKDKIVLDVGCGS-GILSFFAAQ--AGARKIYAVEAST-MAQHAEVLVKSNN-LTDRIVVIPGKVEEVSLP-EQVDII 120 (348)
T ss_dssp GGTTTCEEEEETCTT-SHHHHHHHH--TTCSEEEEEECST-HHHHHHHHHHHTT-CTTTEEEEESCTTTCCCS-SCEEEE
T ss_pred ccCCcCEEEEcCCCc-cHHHHHHHh--CCCCEEEEECCHH-HHHHHHHHHHHcC-CCCcEEEEEcchhhCCCC-CceeEE
Confidence 346789999999997 455677777 2456999999996 8899999999999 788999999999876433 479999
Q ss_pred ehhhhc-cCChhHHHHHHHHHHhhccCCcEEEEe
Q 042119 207 FLAALV-GMSKEEKLTILGHIRKYMKDGGILLVR 239 (286)
Q Consensus 207 ~~aalv-g~~~~~k~~vl~~l~~~l~pgg~lv~r 239 (286)
+..... .+..+...+.+.++.+.|+|||++++.
T Consensus 121 vs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 121 ISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp EECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred EEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 865332 223345567888999999999999854
No 183
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.31 E-value=5.2e-12 Score=112.38 Aligned_cols=98 Identities=16% Similarity=0.253 Sum_probs=77.8
Q ss_pred CCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeehh
Q 042119 130 QPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFLA 209 (286)
Q Consensus 130 ~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~a 209 (286)
++.+|||||||+ |..+..+++ .|.+|+|+|+|+++++.|++... . .++++|+.+++...+.||+|+..
T Consensus 54 ~~~~vLDiGcG~-G~~~~~l~~---~~~~v~gvD~s~~~l~~a~~~~~------~--~~~~~d~~~~~~~~~~fD~v~~~ 121 (260)
T 2avn_A 54 NPCRVLDLGGGT-GKWSLFLQE---RGFEVVLVDPSKEMLEVAREKGV------K--NVVEAKAEDLPFPSGAFEAVLAL 121 (260)
T ss_dssp SCCEEEEETCTT-CHHHHHHHT---TTCEEEEEESCHHHHHHHHHHTC------S--CEEECCTTSCCSCTTCEEEEEEC
T ss_pred CCCeEEEeCCCc-CHHHHHHHH---cCCeEEEEeCCHHHHHHHHhhcC------C--CEEECcHHHCCCCCCCEEEEEEc
Confidence 788999999996 566677877 47899999999999999998732 1 28999998876555679999865
Q ss_pred h-hccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 210 A-LVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 210 a-lvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
. +..+. ++..++++++.+.|+|||.+++..
T Consensus 122 ~~~~~~~-~~~~~~l~~~~~~LkpgG~l~~~~ 152 (260)
T 2avn_A 122 GDVLSYV-ENKDKAFSEIRRVLVPDGLLIATV 152 (260)
T ss_dssp SSHHHHC-SCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred chhhhcc-ccHHHHHHHHHHHcCCCeEEEEEe
Confidence 3 22221 347789999999999999999864
No 184
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.31 E-value=6.8e-12 Score=116.43 Aligned_cols=105 Identities=22% Similarity=0.340 Sum_probs=83.6
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeeh
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFL 208 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~ 208 (286)
.++++|||||||+ |..++.+|++ +..+|+++|+| ++++.|++.++..| +.++++++++|+.+++.+.+.||+|+.
T Consensus 37 ~~~~~VLDiGcGt-G~ls~~la~~--g~~~v~~vD~s-~~~~~a~~~~~~~~-~~~~i~~~~~d~~~~~~~~~~~D~Ivs 111 (328)
T 1g6q_1 37 FKDKIVLDVGCGT-GILSMFAAKH--GAKHVIGVDMS-SIIEMAKELVELNG-FSDKITLLRGKLEDVHLPFPKVDIIIS 111 (328)
T ss_dssp HTTCEEEEETCTT-SHHHHHHHHT--CCSEEEEEESS-THHHHHHHHHHHTT-CTTTEEEEESCTTTSCCSSSCEEEEEE
T ss_pred cCCCEEEEecCcc-HHHHHHHHHC--CCCEEEEEChH-HHHHHHHHHHHHcC-CCCCEEEEECchhhccCCCCcccEEEE
Confidence 5678999999997 5566778772 34599999999 59999999999999 788999999999887655467999986
Q ss_pred hhhc--cCChhHHHHHHHHHHhhccCCcEEEE
Q 042119 209 AALV--GMSKEEKLTILGHIRKYMKDGGILLV 238 (286)
Q Consensus 209 aalv--g~~~~~k~~vl~~l~~~l~pgg~lv~ 238 (286)
..+. ....+....++..+.+.|+|||.++.
T Consensus 112 ~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 112 EWMGYFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp CCCBTTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred eCchhhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 4221 11234566799999999999999973
No 185
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.30 E-value=1e-11 Score=107.92 Aligned_cols=102 Identities=20% Similarity=0.260 Sum_probs=79.8
Q ss_pred hcCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcc
Q 042119 125 ENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYD 204 (286)
Q Consensus 125 ~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD 204 (286)
.....++.+||+||||+ |..+..+++ .+.+|+++|+|+++++.|++.+...| +++++++|+.+.....+.||
T Consensus 65 ~~~~~~~~~vLdiG~G~-G~~~~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~~----~v~~~~~d~~~~~~~~~~fD 136 (231)
T 1vbf_A 65 ELDLHKGQKVLEIGTGI-GYYTALIAE---IVDKVVSVEINEKMYNYASKLLSYYN----NIKLILGDGTLGYEEEKPYD 136 (231)
T ss_dssp HTTCCTTCEEEEECCTT-SHHHHHHHH---HSSEEEEEESCHHHHHHHHHHHTTCS----SEEEEESCGGGCCGGGCCEE
T ss_pred hcCCCCCCEEEEEcCCC-CHHHHHHHH---HcCEEEEEeCCHHHHHHHHHHHhhcC----CeEEEECCcccccccCCCcc
Confidence 34567889999999997 666677877 34899999999999999999876654 79999999977333335799
Q ss_pred eeehhhhccCChhHHHHHHHHHHhhccCCcEEEEeec
Q 042119 205 CIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRSA 241 (286)
Q Consensus 205 ~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~~ 241 (286)
+|+....... +.+++.+.|+|||++++...
T Consensus 137 ~v~~~~~~~~-------~~~~~~~~L~pgG~l~~~~~ 166 (231)
T 1vbf_A 137 RVVVWATAPT-------LLCKPYEQLKEGGIMILPIG 166 (231)
T ss_dssp EEEESSBBSS-------CCHHHHHTEEEEEEEEEEEC
T ss_pred EEEECCcHHH-------HHHHHHHHcCCCcEEEEEEc
Confidence 9997765421 22468899999999998764
No 186
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.30 E-value=6.5e-12 Score=115.21 Aligned_cols=110 Identities=18% Similarity=0.214 Sum_probs=82.6
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHh--cCCC-CCCeEEEEccccchhhc-CCCcc
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVAS--DAEF-EGRMKFLTRDIMEVKEQ-LGEYD 204 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~--~g~l-~~~i~f~~~D~~~~~~~-l~~fD 204 (286)
..+++||+||||+ |..+..+++ +.+..+|+++|+|+++++.|++.+.. .+ + .++++++++|+.+.... .+.||
T Consensus 89 ~~~~~VLdiG~G~-G~~~~~l~~-~~~~~~v~~vDid~~~~~~a~~~~~~~~~~-~~~~~v~~~~~D~~~~l~~~~~~fD 165 (296)
T 1inl_A 89 PNPKKVLIIGGGD-GGTLREVLK-HDSVEKAILCEVDGLVIEAARKYLKQTSCG-FDDPRAEIVIANGAEYVRKFKNEFD 165 (296)
T ss_dssp SSCCEEEEEECTT-CHHHHHHTT-STTCSEEEEEESCHHHHHHHHHHCHHHHGG-GGCTTEEEEESCHHHHGGGCSSCEE
T ss_pred CCCCEEEEEcCCc-CHHHHHHHh-cCCCCEEEEEECCHHHHHHHHHHhHhhccc-cCCCceEEEECcHHHHHhhCCCCce
Confidence 4578999999996 666777777 35678999999999999999998764 23 2 36899999999775432 34799
Q ss_pred eeehhhhcc-CChh---HHHHHHHHHHhhccCCcEEEEeec
Q 042119 205 CIFLAALVG-MSKE---EKLTILGHIRKYMKDGGILLVRSA 241 (286)
Q Consensus 205 ~V~~aalvg-~~~~---~k~~vl~~l~~~l~pgg~lv~r~~ 241 (286)
+|+.+..-. .... ...++++.+.+.|+|||++++...
T Consensus 166 ~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 206 (296)
T 1inl_A 166 VIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETE 206 (296)
T ss_dssp EEEEEC----------CCSHHHHHHHHHHEEEEEEEEEECC
T ss_pred EEEEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEcc
Confidence 999764311 0000 125799999999999999999754
No 187
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.30 E-value=9.1e-12 Score=118.41 Aligned_cols=105 Identities=15% Similarity=0.209 Sum_probs=86.5
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeeh
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFL 208 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~ 208 (286)
.++.+|||+|||+ |..++.+++ .+++|+++|+|+.+++.|++++...| + +++|+++|+.+...+.+.||+|+.
T Consensus 232 ~~~~~VLDlGcG~-G~~~~~la~---~g~~V~gvDis~~al~~A~~n~~~~~-~--~v~~~~~D~~~~~~~~~~fD~Ii~ 304 (381)
T 3dmg_A 232 VRGRQVLDLGAGY-GALTLPLAR---MGAEVVGVEDDLASVLSLQKGLEANA-L--KAQALHSDVDEALTEEARFDIIVT 304 (381)
T ss_dssp TTTCEEEEETCTT-STTHHHHHH---TTCEEEEEESBHHHHHHHHHHHHHTT-C--CCEEEECSTTTTSCTTCCEEEEEE
T ss_pred CCCCEEEEEeeeC-CHHHHHHHH---cCCEEEEEECCHHHHHHHHHHHHHcC-C--CeEEEEcchhhccccCCCeEEEEE
Confidence 4678999999996 666778887 47899999999999999999999988 3 499999999886655468999996
Q ss_pred hhhcc----CChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 209 AALVG----MSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 209 aalvg----~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
..... ...+...++++++.+.|+|||.+++..
T Consensus 305 npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~ 340 (381)
T 3dmg_A 305 NPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVS 340 (381)
T ss_dssp CCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEE
Confidence 53221 124667789999999999999999865
No 188
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.29 E-value=3.5e-12 Score=113.02 Aligned_cols=109 Identities=13% Similarity=0.116 Sum_probs=82.4
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhc-CCCcEEEEEeCChHHHHHHHHHHHhc---CCCCCC-------------------
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHH-LTSTHFDNFDIDEAANDVARSIVASD---AEFEGR------------------- 185 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~-~~g~~V~~iDid~~ai~~Ar~~~~~~---g~l~~~------------------- 185 (286)
.++.+|||+|||+ |..++.+++.. .++.+|+|+|+|+++++.|++.+... | +..+
T Consensus 50 ~~~~~vLD~gcGs-G~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 127 (250)
T 1o9g_A 50 DGPVTLWDPCCGS-GYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAG-LTARELERREQSERFGKPSYLEA 127 (250)
T ss_dssp CSCEEEEETTCTT-SHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHH-HHHHHHHHHHHHHHHCCHHHHHH
T ss_pred CCCCeEEECCCCC-CHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhcc-ccccchhhhhhhhhcccccchhh
Confidence 4678999999997 56667777621 35789999999999999999988766 5 3333
Q ss_pred ------eE-------------EEEccccchhh-----cCCCcceeehhhh-ccCC-------hhHHHHHHHHHHhhccCC
Q 042119 186 ------MK-------------FLTRDIMEVKE-----QLGEYDCIFLAAL-VGMS-------KEEKLTILGHIRKYMKDG 233 (286)
Q Consensus 186 ------i~-------------f~~~D~~~~~~-----~l~~fD~V~~aal-vg~~-------~~~k~~vl~~l~~~l~pg 233 (286)
++ |.++|+.+... .-..||+|+.... +... .+....+++++.+.|+||
T Consensus 128 ~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg 207 (250)
T 1o9g_A 128 AQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAH 207 (250)
T ss_dssp HHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTT
T ss_pred hhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCC
Confidence 77 99999977432 2237999986421 1111 356678999999999999
Q ss_pred cEEEEe
Q 042119 234 GILLVR 239 (286)
Q Consensus 234 g~lv~r 239 (286)
|++++.
T Consensus 208 G~l~~~ 213 (250)
T 1o9g_A 208 AVIAVT 213 (250)
T ss_dssp CEEEEE
T ss_pred cEEEEe
Confidence 999984
No 189
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.29 E-value=2.5e-11 Score=110.11 Aligned_cols=105 Identities=19% Similarity=0.252 Sum_probs=76.8
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCc-EEEEEeC-ChHHHHHHHHHH-----HhcCCCC----CCeEEEEccccc--
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTST-HFDNFDI-DEAANDVARSIV-----ASDAEFE----GRMKFLTRDIME-- 195 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~-~V~~iDi-d~~ai~~Ar~~~-----~~~g~l~----~~i~f~~~D~~~-- 195 (286)
.++++|||||||+ |..++.+|+ .|+ +|+++|+ |+++++.|++++ +..| +. +++++...|..+
T Consensus 78 ~~~~~vLDlG~G~-G~~~~~~a~---~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~-~~~~~~~~v~~~~~~~~~~~ 152 (281)
T 3bzb_A 78 IAGKTVCELGAGA-GLVSIVAFL---AGADQVVATDYPDPEILNSLESNIREHTANSCS-SETVKRASPKVVPYRWGDSP 152 (281)
T ss_dssp TTTCEEEETTCTT-SHHHHHHHH---TTCSEEEEEECSCHHHHHHHHHHHHTTCC-----------CCCEEEECCTTSCT
T ss_pred cCCCeEEEecccc-cHHHHHHHH---cCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcc-cccCCCCCeEEEEecCCCcc
Confidence 5778999999996 667788887 345 9999999 899999999999 6666 44 579998666433
Q ss_pred --hhh--cCCCcceeehhhhccCChhHHHHHHHHHHhhcc---C--CcEEEEe
Q 042119 196 --VKE--QLGEYDCIFLAALVGMSKEEKLTILGHIRKYMK---D--GGILLVR 239 (286)
Q Consensus 196 --~~~--~l~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~---p--gg~lv~r 239 (286)
+.. ..+.||+|+.+..+ .+.+....+++.+.+.|+ | ||++++-
T Consensus 153 ~~~~~~~~~~~fD~Ii~~dvl-~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~ 204 (281)
T 3bzb_A 153 DSLQRCTGLQRFQVVLLADLL-SFHQAHDALLRSVKMLLALPANDPTAVALVT 204 (281)
T ss_dssp HHHHHHHSCSSBSEEEEESCC-SCGGGHHHHHHHHHHHBCCTTTCTTCEEEEE
T ss_pred HHHHhhccCCCCCEEEEeCcc-cChHHHHHHHHHHHHHhcccCCCCCCEEEEE
Confidence 221 13579999864333 335677889999999999 9 9987664
No 190
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.27 E-value=8.1e-12 Score=115.68 Aligned_cols=107 Identities=20% Similarity=0.275 Sum_probs=81.4
Q ss_pred CCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcC------C---CCCCeEEEEccccchh
Q 042119 127 GVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDA------E---FEGRMKFLTRDIMEVK 197 (286)
Q Consensus 127 ~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g------~---l~~~i~f~~~D~~~~~ 197 (286)
.+.++++|||||||+ |..++.+|+...+..+|+++|+++++++.|+++++..| . +.++++|+++|+.+..
T Consensus 102 ~~~~g~~VLDiG~G~-G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~ 180 (336)
T 2b25_A 102 DINPGDTVLEAGSGS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGAT 180 (336)
T ss_dssp TCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC
T ss_pred CCCCCCEEEEeCCCc-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcc
Confidence 567899999999997 55667777732456899999999999999999988632 0 2368999999998753
Q ss_pred hcC--CCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 198 EQL--GEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 198 ~~l--~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
.++ +.||+|+.+.. ....+++++.+.|+|||.+++-.
T Consensus 181 ~~~~~~~fD~V~~~~~------~~~~~l~~~~~~LkpgG~lv~~~ 219 (336)
T 2b25_A 181 EDIKSLTFDAVALDML------NPHVTLPVFYPHLKHGGVCAVYV 219 (336)
T ss_dssp -------EEEEEECSS------STTTTHHHHGGGEEEEEEEEEEE
T ss_pred cccCCCCeeEEEECCC------CHHHHHHHHHHhcCCCcEEEEEe
Confidence 222 46999997532 22348999999999999999865
No 191
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.27 E-value=6e-11 Score=121.97 Aligned_cols=109 Identities=11% Similarity=0.104 Sum_probs=87.0
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhc------CCCCCCeEEEEccccchhhcCCC
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASD------AEFEGRMKFLTRDIMEVKEQLGE 202 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~------g~l~~~i~f~~~D~~~~~~~l~~ 202 (286)
.++.+|||||||+ |..++.+|+...+..+|+|||+|+++++.|++.++.. |. .+++|+++|+.+++...+.
T Consensus 720 ~~g~rVLDVGCGT-G~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl--~nVefiqGDa~dLp~~d~s 796 (950)
T 3htx_A 720 SSASTLVDFGCGS-GSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNV--KSATLYDGSILEFDSRLHD 796 (950)
T ss_dssp SCCSEEEEETCSS-SHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSC--SEEEEEESCTTSCCTTSCS
T ss_pred cCCCEEEEECCCC-CHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCC--CceEEEECchHhCCcccCC
Confidence 4789999999996 6677888873114489999999999999999977643 42 5899999999988877678
Q ss_pred cceeehhhhc-cCChhHHHHHHHHHHhhccCCcEEEEeec
Q 042119 203 YDCIFLAALV-GMSKEEKLTILGHIRKYMKDGGILLVRSA 241 (286)
Q Consensus 203 fD~V~~aalv-g~~~~~k~~vl~~l~~~l~pgg~lv~r~~ 241 (286)
||+|+....+ .++.+....+++++.+.|||| .+++.+.
T Consensus 797 FDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTP 835 (950)
T 3htx_A 797 VDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTP 835 (950)
T ss_dssp CCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEEC
T ss_pred eeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEec
Confidence 9999876544 445556667999999999999 7777653
No 192
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.27 E-value=1e-11 Score=112.42 Aligned_cols=103 Identities=14% Similarity=0.105 Sum_probs=84.0
Q ss_pred CCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceee
Q 042119 128 VVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIF 207 (286)
Q Consensus 128 ~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~ 207 (286)
..++++|||+|||++ .-++.+|+. .++++|+++|+++++++.|+++++..| + ++++|+++|+.+. .....||+|+
T Consensus 117 ~~~~~~VLDlgcG~G-~~s~~la~~-~~~~~V~~vD~s~~av~~a~~n~~~n~-l-~~~~~~~~d~~~~-~~~~~~D~Vi 191 (272)
T 3a27_A 117 SNENEVVVDMFAGIG-YFTIPLAKY-SKPKLVYAIEKNPTAYHYLCENIKLNK-L-NNVIPILADNRDV-ELKDVADRVI 191 (272)
T ss_dssp CCTTCEEEETTCTTT-TTHHHHHHH-TCCSEEEEEECCHHHHHHHHHHHHHTT-C-SSEEEEESCGGGC-CCTTCEEEEE
T ss_pred cCCCCEEEEecCcCC-HHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHHHcC-C-CCEEEEECChHHc-CccCCceEEE
Confidence 578899999999975 556777773 457799999999999999999999998 4 5789999999887 3334799998
Q ss_pred hhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 208 LAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 208 ~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
+...- ...+++..+.+.|+|||++++..
T Consensus 192 ~d~p~-----~~~~~l~~~~~~LkpgG~l~~s~ 219 (272)
T 3a27_A 192 MGYVH-----KTHKFLDKTFEFLKDRGVIHYHE 219 (272)
T ss_dssp ECCCS-----SGGGGHHHHHHHEEEEEEEEEEE
T ss_pred ECCcc-----cHHHHHHHHHHHcCCCCEEEEEE
Confidence 76421 34468899999999999998865
No 193
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.26 E-value=1.2e-11 Score=120.84 Aligned_cols=105 Identities=21% Similarity=0.258 Sum_probs=83.6
Q ss_pred CCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceee
Q 042119 128 VVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIF 207 (286)
Q Consensus 128 ~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~ 207 (286)
..++++|||||||+ |..++.+|+ .+..+|+++|+|+ +++.|++.++..| +.++++|+.+|+.+++.+ +.||+|+
T Consensus 156 ~~~~~~VLDiGcGt-G~la~~la~--~~~~~V~gvD~s~-~l~~A~~~~~~~g-l~~~v~~~~~d~~~~~~~-~~fD~Iv 229 (480)
T 3b3j_A 156 DFKDKIVLDVGCGS-GILSFFAAQ--AGARKIYAVEAST-MAQHAEVLVKSNN-LTDRIVVIPGKVEEVSLP-EQVDIII 229 (480)
T ss_dssp GTTTCEEEEESCST-THHHHHHHH--TTCSEEEEEECHH-HHHHHHHHHHHTT-CTTTEEEEESCTTTCCCS-SCEEEEE
T ss_pred hcCCCEEEEecCcc-cHHHHHHHH--cCCCEEEEEEcHH-HHHHHHHHHHHcC-CCCcEEEEECchhhCccC-CCeEEEE
Confidence 35788999999997 556677777 3667999999998 9999999999999 788999999999775432 4799999
Q ss_pred hhhhc-cCChhHHHHHHHHHHhhccCCcEEEE
Q 042119 208 LAALV-GMSKEEKLTILGHIRKYMKDGGILLV 238 (286)
Q Consensus 208 ~aalv-g~~~~~k~~vl~~l~~~l~pgg~lv~ 238 (286)
..... .+..+...+.+.++.+.|+|||.++.
T Consensus 230 s~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 230 SEPMGYMLFNERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp CCCCHHHHTCHHHHHHHHHGGGGEEEEEEEES
T ss_pred EeCchHhcCcHHHHHHHHHHHHhcCCCCEEEE
Confidence 64321 11224556788889999999999985
No 194
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.26 E-value=1.3e-11 Score=117.31 Aligned_cols=103 Identities=23% Similarity=0.321 Sum_probs=81.8
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCC-cEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceee
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTS-THFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIF 207 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g-~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~ 207 (286)
.++++|||||||+ |+-+++.|+ .| .+|++||.|+ +++.|+++++..| ++++|+++.+|+.++..+ ..||+|+
T Consensus 82 ~~~k~VLDvG~Gt-GiLs~~Aa~---aGA~~V~ave~s~-~~~~a~~~~~~n~-~~~~i~~i~~~~~~~~lp-e~~Dviv 154 (376)
T 4hc4_A 82 LRGKTVLDVGAGT-GILSIFCAQ---AGARRVYAVEASA-IWQQAREVVRFNG-LEDRVHVLPGPVETVELP-EQVDAIV 154 (376)
T ss_dssp HTTCEEEEETCTT-SHHHHHHHH---TTCSEEEEEECST-THHHHHHHHHHTT-CTTTEEEEESCTTTCCCS-SCEEEEE
T ss_pred cCCCEEEEeCCCc-cHHHHHHHH---hCCCEEEEEeChH-HHHHHHHHHHHcC-CCceEEEEeeeeeeecCC-ccccEEE
Confidence 4689999999996 566777777 45 4799999996 8899999999999 899999999999886544 5799987
Q ss_pred hh---hhccCChhHHHHHHHHHHhhccCCcEEEEe
Q 042119 208 LA---ALVGMSKEEKLTILGHIRKYMKDGGILLVR 239 (286)
Q Consensus 208 ~a---alvg~~~~~k~~vl~~l~~~l~pgg~lv~r 239 (286)
.. ... .....-..++....+.|+|||+++-.
T Consensus 155 sE~~~~~l-~~e~~l~~~l~a~~r~Lkp~G~~iP~ 188 (376)
T 4hc4_A 155 SEWMGYGL-LHESMLSSVLHARTKWLKEGGLLLPA 188 (376)
T ss_dssp CCCCBTTB-TTTCSHHHHHHHHHHHEEEEEEEESC
T ss_pred eecccccc-cccchhhhHHHHHHhhCCCCceECCc
Confidence 42 211 12234567888889999999998754
No 195
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.26 E-value=2.2e-11 Score=106.83 Aligned_cols=105 Identities=14% Similarity=0.162 Sum_probs=80.4
Q ss_pred cCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcce
Q 042119 126 NGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDC 205 (286)
Q Consensus 126 ~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~ 205 (286)
....++.+||+||||+ |..+..+++. .+ .+|+++|+|+++++.|++.++..| + .++++.++|+..-..+...||+
T Consensus 87 l~~~~~~~vLdiG~G~-G~~~~~la~~-~~-~~v~~vD~~~~~~~~a~~~~~~~~-~-~~v~~~~~d~~~~~~~~~~fD~ 161 (235)
T 1jg1_A 87 ANLKPGMNILEVGTGS-GWNAALISEI-VK-TDVYTIERIPELVEFAKRNLERAG-V-KNVHVILGDGSKGFPPKAPYDV 161 (235)
T ss_dssp HTCCTTCCEEEECCTT-SHHHHHHHHH-HC-SCEEEEESCHHHHHHHHHHHHHTT-C-CSEEEEESCGGGCCGGGCCEEE
T ss_pred cCCCCCCEEEEEeCCc-CHHHHHHHHH-hC-CEEEEEeCCHHHHHHHHHHHHHcC-C-CCcEEEECCcccCCCCCCCccE
Confidence 3567889999999995 6667778873 33 899999999999999999999998 4 4599999997322222235999
Q ss_pred eehhhhccCChhHHHHHHHHHHhhccCCcEEEEeecC
Q 042119 206 IFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRSAK 242 (286)
Q Consensus 206 V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~~~ 242 (286)
|+....... +.+.+.+.|+|||++++....
T Consensus 162 Ii~~~~~~~-------~~~~~~~~L~pgG~lvi~~~~ 191 (235)
T 1jg1_A 162 IIVTAGAPK-------IPEPLIEQLKIGGKLIIPVGS 191 (235)
T ss_dssp EEECSBBSS-------CCHHHHHTEEEEEEEEEEECS
T ss_pred EEECCcHHH-------HHHHHHHhcCCCcEEEEEEec
Confidence 997654421 223688999999999987643
No 196
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.26 E-value=1e-11 Score=115.63 Aligned_cols=109 Identities=19% Similarity=0.206 Sum_probs=83.1
Q ss_pred HHhcCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCC
Q 042119 123 LSENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGE 202 (286)
Q Consensus 123 l~~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~ 202 (286)
+......++.+|||||||+ |..+..+++ .+++.+++++|+ ++++. ++.++..+ +.++++|+.+|..+ +. .+
T Consensus 177 ~~~~~~~~~~~vLDvG~G~-G~~~~~l~~-~~p~~~~~~~D~-~~~~~--~~~~~~~~-~~~~v~~~~~d~~~-~~--p~ 247 (348)
T 3lst_A 177 ARAGDFPATGTVADVGGGR-GGFLLTVLR-EHPGLQGVLLDR-AEVVA--RHRLDAPD-VAGRWKVVEGDFLR-EV--PH 247 (348)
T ss_dssp HHHSCCCSSEEEEEETCTT-SHHHHHHHH-HCTTEEEEEEEC-HHHHT--TCCCCCGG-GTTSEEEEECCTTT-CC--CC
T ss_pred HHhCCccCCceEEEECCcc-CHHHHHHHH-HCCCCEEEEecC-HHHhh--cccccccC-CCCCeEEEecCCCC-CC--CC
Confidence 3344557789999999997 566677777 478999999999 55555 44444456 56899999999852 22 28
Q ss_pred cceeehhhhc-cCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 203 YDCIFLAALV-GMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 203 fD~V~~aalv-g~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
||+|+....+ .++.++..++++++++.|||||++++.+
T Consensus 248 ~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e 286 (348)
T 3lst_A 248 ADVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVID 286 (348)
T ss_dssp CSEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEE
T ss_pred CcEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 9999876544 4565665799999999999999999865
No 197
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.26 E-value=1.2e-11 Score=118.53 Aligned_cols=99 Identities=17% Similarity=0.188 Sum_probs=78.1
Q ss_pred CCCCEEEEeccC------CChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhc---
Q 042119 129 VQPKKVAFVGSG------PMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQ--- 199 (286)
Q Consensus 129 ~~~~~VL~IG~G------~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~--- 199 (286)
.++.+||||||| +.|. ++.++++.+++++|+|+|+|+++. .. ..+++|+++|+.+++..
T Consensus 215 ~~~~rVLDIGCG~~~~~~TGG~-Sl~la~~~fP~a~V~GVDiSp~m~---------~~--~~rI~fv~GDa~dlpf~~~l 282 (419)
T 3sso_A 215 NQQVRVLEIGVGGYKHPEWGGG-SLRMWKSFFPRGQIYGLDIMDKSH---------VD--ELRIRTIQGDQNDAEFLDRI 282 (419)
T ss_dssp TSCCEEEEECCSCTTCSSCCCH-HHHHHHHHCTTCEEEEEESSCCGG---------GC--BTTEEEEECCTTCHHHHHHH
T ss_pred CCCCEEEEEecCCCcCCCCCHH-HHHHHHHhCCCCEEEEEECCHHHh---------hc--CCCcEEEEecccccchhhhh
Confidence 567999999999 5454 455555456899999999999972 12 36899999999886654
Q ss_pred ---CCCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEeec
Q 042119 200 ---LGEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRSA 241 (286)
Q Consensus 200 ---l~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~~ 241 (286)
.+.||+|+.... +..++..+.|+++.++|||||++++.+.
T Consensus 283 ~~~d~sFDlVisdgs--H~~~d~~~aL~el~rvLKPGGvlVi~Dl 325 (419)
T 3sso_A 283 ARRYGPFDIVIDDGS--HINAHVRTSFAALFPHVRPGGLYVIEDM 325 (419)
T ss_dssp HHHHCCEEEEEECSC--CCHHHHHHHHHHHGGGEEEEEEEEEECG
T ss_pred hcccCCccEEEECCc--ccchhHHHHHHHHHHhcCCCeEEEEEec
Confidence 468999996543 2346788999999999999999999763
No 198
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.26 E-value=1.9e-11 Score=111.41 Aligned_cols=113 Identities=20% Similarity=0.267 Sum_probs=83.5
Q ss_pred CCCEEEEeccCCChh---hHHHHHhhcCC----CcEEEEEeCChHHHHHHHHHHHh-----------------------c
Q 042119 130 QPKKVAFVGSGPMPL---TSIIMAKHHLT----STHFDNFDIDEAANDVARSIVAS-----------------------D 179 (286)
Q Consensus 130 ~~~~VL~IG~G~lp~---tai~lA~~~~~----g~~V~~iDid~~ai~~Ar~~~~~-----------------------~ 179 (286)
++.+|+++|||++-. -|+.+++. .+ +.+|+|+|+|++|++.|++.+-. .
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~-~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~ 183 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADA-LGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHE 183 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHH-HCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSC
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHh-cccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCC
Confidence 467999999997431 35566662 22 57999999999999999986410 0
Q ss_pred C------CCCCCeEEEEccccchhhc-CCCcceeehhh-hccCChhHHHHHHHHHHhhccCCcEEEEeecCc
Q 042119 180 A------EFEGRMKFLTRDIMEVKEQ-LGEYDCIFLAA-LVGMSKEEKLTILGHIRKYMKDGGILLVRSAKG 243 (286)
Q Consensus 180 g------~l~~~i~f~~~D~~~~~~~-l~~fD~V~~aa-lvg~~~~~k~~vl~~l~~~l~pgg~lv~r~~~g 243 (286)
| .+.++|+|.++|+.+.+.+ .+.||+|+... ++..+.+.+.++++++++.|+|||.+++-....
T Consensus 184 ~~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg~sE~ 255 (274)
T 1af7_A 184 GLVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAGHSEN 255 (274)
T ss_dssp SEEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEECTTCC
T ss_pred CceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEEeccc
Confidence 0 0114799999999874333 35799999654 335677888999999999999999999965443
No 199
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.25 E-value=6.6e-12 Score=111.19 Aligned_cols=106 Identities=16% Similarity=0.187 Sum_probs=73.3
Q ss_pred CCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccc-hhhcC-----CCc
Q 042119 130 QPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIME-VKEQL-----GEY 203 (286)
Q Consensus 130 ~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~-~~~~l-----~~f 203 (286)
++.+|||+|||++.+ ++.+|++ .++++|+++|+|+++++.|++.++..| +.++++|+++|+.+ +...+ +.|
T Consensus 65 ~~~~vLDlG~G~G~~-~~~la~~-~~~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~~~~~~~~~~~~~f 141 (254)
T 2h00_A 65 TLRRGIDIGTGASCI-YPLLGAT-LNGWYFLATEVDDMCFNYAKKNVEQNN-LSDLIKVVKVPQKTLLMDALKEESEIIY 141 (254)
T ss_dssp CCCEEEEESCTTTTH-HHHHHHH-HHCCEEEEEESCHHHHHHHHHHHHHTT-CTTTEEEEECCTTCSSTTTSTTCCSCCB
T ss_pred CCCEEEEeCCChhHH-HHHHHHh-CCCCeEEEEECCHHHHHHHHHHHHHcC-CCccEEEEEcchhhhhhhhhhcccCCcc
Confidence 578999999997554 4556652 468999999999999999999999999 67789999999866 22222 369
Q ss_pred ceeehhhh-ccCC-------------hhHHHHHHHHHHhhccCCcEEEE
Q 042119 204 DCIFLAAL-VGMS-------------KEEKLTILGHIRKYMKDGGILLV 238 (286)
Q Consensus 204 D~V~~aal-vg~~-------------~~~k~~vl~~l~~~l~pgg~lv~ 238 (286)
|+|+..-- .... .+++..++..+.+.|||||.+.+
T Consensus 142 D~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~ 190 (254)
T 2h00_A 142 DFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEF 190 (254)
T ss_dssp SEEEECCCCC-------------------------CTTTTHHHHTHHHH
T ss_pred cEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEE
Confidence 99986521 1100 12334567788888899887654
No 200
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.24 E-value=2e-10 Score=108.30 Aligned_cols=106 Identities=18% Similarity=0.217 Sum_probs=82.3
Q ss_pred CCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccc-hhhc-CCCcc
Q 042119 127 GVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIME-VKEQ-LGEYD 204 (286)
Q Consensus 127 ~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~-~~~~-l~~fD 204 (286)
...++++||||| |+ |..++.+|+ ..++.+|+++|+|+++++.|+++++..| +. +++|+++|+.+ ++.. .+.||
T Consensus 169 ~~~~~~~VLDlG-G~-G~~~~~la~-~~~~~~v~~vDi~~~~l~~a~~~~~~~g-~~-~v~~~~~D~~~~l~~~~~~~fD 243 (373)
T 2qm3_A 169 GDLENKDIFVLG-DD-DLTSIALML-SGLPKRIAVLDIDERLTKFIEKAANEIG-YE-DIEIFTFDLRKPLPDYALHKFD 243 (373)
T ss_dssp TCSTTCEEEEES-CT-TCHHHHHHH-HTCCSEEEEECSCHHHHHHHHHHHHHHT-CC-CEEEECCCTTSCCCTTTSSCBS
T ss_pred CCCCCCEEEEEC-CC-CHHHHHHHH-hCCCCEEEEEECCHHHHHHHHHHHHHcC-CC-CEEEEEChhhhhchhhccCCcc
Confidence 345689999999 96 566777787 3556799999999999999999999999 55 89999999987 4432 24799
Q ss_pred eeehhhhccCChhHHHHHHHHHHhhccCCcEE-EEe
Q 042119 205 CIFLAALVGMSKEEKLTILGHIRKYMKDGGIL-LVR 239 (286)
Q Consensus 205 ~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~l-v~r 239 (286)
+|+++...+ ......+++++.+.|+|||.+ ++.
T Consensus 244 ~Vi~~~p~~--~~~~~~~l~~~~~~LkpgG~~~~~~ 277 (373)
T 2qm3_A 244 TFITDPPET--LEAIRAFVGRGIATLKGPRCAGYFG 277 (373)
T ss_dssp EEEECCCSS--HHHHHHHHHHHHHTBCSTTCEEEEE
T ss_pred EEEECCCCc--hHHHHHHHHHHHHHcccCCeEEEEE
Confidence 999864221 122468999999999999943 443
No 201
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.23 E-value=3.6e-11 Score=114.16 Aligned_cols=108 Identities=11% Similarity=0.141 Sum_probs=84.1
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCc-EEEEEeCChHHHHHHHHHHHhcCCCCC-CeEEEEccccchhhcC----CC
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTST-HFDNFDIDEAANDVARSIVASDAEFEG-RMKFLTRDIMEVKEQL----GE 202 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~-~V~~iDid~~ai~~Ar~~~~~~g~l~~-~i~f~~~D~~~~~~~l----~~ 202 (286)
.++++|||+|||++ .-++.+|+ .|+ +|+++|+|++|++.|+++++..| +.+ +++|+++|+.+....+ ..
T Consensus 211 ~~~~~VLDl~cGtG-~~sl~la~---~ga~~V~~vD~s~~al~~A~~N~~~n~-~~~~~v~~~~~D~~~~l~~~~~~~~~ 285 (385)
T 2b78_A 211 AAGKTVLNLFSYTA-AFSVAAAM---GGAMATTSVDLAKRSRALSLAHFEANH-LDMANHQLVVMDVFDYFKYARRHHLT 285 (385)
T ss_dssp TBTCEEEEETCTTT-HHHHHHHH---TTBSEEEEEESCTTHHHHHHHHHHHTT-CCCTTEEEEESCHHHHHHHHHHTTCC
T ss_pred cCCCeEEEEeeccC-HHHHHHHH---CCCCEEEEEECCHHHHHHHHHHHHHcC-CCccceEEEECCHHHHHHHHHHhCCC
Confidence 57889999999974 55577777 355 89999999999999999999999 555 8999999998754322 37
Q ss_pred cceeehhhh--------ccCChhHHHHHHHHHHhhccCCcEEEEeec
Q 042119 203 YDCIFLAAL--------VGMSKEEKLTILGHIRKYMKDGGILLVRSA 241 (286)
Q Consensus 203 fD~V~~aal--------vg~~~~~k~~vl~~l~~~l~pgg~lv~r~~ 241 (286)
||+|+++.- +........+++..+.+.|+|||++++...
T Consensus 286 fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~ 332 (385)
T 2b78_A 286 YDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTN 332 (385)
T ss_dssp EEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred ccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 999997421 111123455688889999999999988763
No 202
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.23 E-value=1.5e-11 Score=114.52 Aligned_cols=107 Identities=19% Similarity=0.274 Sum_probs=85.3
Q ss_pred CCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceee
Q 042119 128 VVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIF 207 (286)
Q Consensus 128 ~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~ 207 (286)
..++.+|||||||+ |..++.+++ ..++.+|+++|+|+.+++.|++.+...| + +++++.+|+.+.. .+.||+|+
T Consensus 194 ~~~~~~VLDlGcG~-G~~~~~la~-~~~~~~v~~vD~s~~~l~~a~~~~~~~~-~--~~~~~~~d~~~~~--~~~fD~Iv 266 (343)
T 2pjd_A 194 PHTKGKVLDVGCGA-GVLSVAFAR-HSPKIRLTLCDVSAPAVEASRATLAANG-V--EGEVFASNVFSEV--KGRFDMII 266 (343)
T ss_dssp TTCCSBCCBTTCTT-SHHHHHHHH-HCTTCBCEEEESBHHHHHHHHHHHHHTT-C--CCEEEECSTTTTC--CSCEEEEE
T ss_pred cCCCCeEEEecCcc-CHHHHHHHH-HCCCCEEEEEECCHHHHHHHHHHHHHhC-C--CCEEEEccccccc--cCCeeEEE
Confidence 45678999999996 556677777 3677899999999999999999999888 3 4788999986643 35799998
Q ss_pred hhhhccC----ChhHHHHHHHHHHhhccCCcEEEEeec
Q 042119 208 LAALVGM----SKEEKLTILGHIRKYMKDGGILLVRSA 241 (286)
Q Consensus 208 ~aalvg~----~~~~k~~vl~~l~~~l~pgg~lv~r~~ 241 (286)
.....+. +.+...++++++.+.|+|||.+++...
T Consensus 267 ~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 304 (343)
T 2pjd_A 267 SNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVAN 304 (343)
T ss_dssp ECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred ECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEc
Confidence 7533221 345678899999999999999988653
No 203
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.23 E-value=2.5e-11 Score=110.82 Aligned_cols=108 Identities=18% Similarity=0.267 Sum_probs=78.2
Q ss_pred CCCEEEEeccCC--ChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhh----c--CC
Q 042119 130 QPKKVAFVGSGP--MPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKE----Q--LG 201 (286)
Q Consensus 130 ~~~~VL~IG~G~--lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~----~--l~ 201 (286)
..++|||||||. .+.+ ..+|++..|+++|+++|.||.|+++||+++...+ ..+++|+++|+.+... . -+
T Consensus 78 g~~q~LDLGcG~pT~~~~-~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~--~~~~~~v~aD~~~~~~~l~~~~~~~ 154 (277)
T 3giw_A 78 GIRQFLDIGTGIPTSPNL-HEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTP--EGRTAYVEADMLDPASILDAPELRD 154 (277)
T ss_dssp CCCEEEEESCCSCCSSCH-HHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCS--SSEEEEEECCTTCHHHHHTCHHHHT
T ss_pred CCCEEEEeCCCCCcccHH-HHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCC--CCcEEEEEecccChhhhhccccccc
Confidence 457999999994 3344 3344435789999999999999999999876544 2579999999987531 0 12
Q ss_pred Ccc-----eeehhhhc-cCChhH-HHHHHHHHHhhccCCcEEEEee
Q 042119 202 EYD-----CIFLAALV-GMSKEE-KLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 202 ~fD-----~V~~aalv-g~~~~~-k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
.|| .|+..+.. ..+.++ ...++.++++.|+|||.|++..
T Consensus 155 ~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~ 200 (277)
T 3giw_A 155 TLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSI 200 (277)
T ss_dssp TCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEE
T ss_pred ccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEe
Confidence 354 34444333 334333 4789999999999999999975
No 204
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.22 E-value=4.8e-11 Score=116.07 Aligned_cols=111 Identities=16% Similarity=0.124 Sum_probs=85.9
Q ss_pred CCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhh-cCCCcce
Q 042119 127 GVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKE-QLGEYDC 205 (286)
Q Consensus 127 ~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~-~l~~fD~ 205 (286)
.+.++.+|||+||||++.|. .+|+....+++|+++|+|+.+++.+++++++.| + .++.++++|+.++.. ..+.||.
T Consensus 102 ~~~~g~~VLDlcaGpGgkt~-~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g-~-~nv~v~~~Da~~l~~~~~~~FD~ 178 (456)
T 3m4x_A 102 AAKPGEKVLDLCAAPGGKST-QLAAQMKGKGLLVTNEIFPKRAKILSENIERWG-V-SNAIVTNHAPAELVPHFSGFFDR 178 (456)
T ss_dssp CCCTTCEEEESSCTTCHHHH-HHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHT-C-SSEEEECCCHHHHHHHHTTCEEE
T ss_pred CCCCCCEEEEECCCcCHHHH-HHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcC-C-CceEEEeCCHHHhhhhccccCCE
Confidence 46788999999999977664 555533345899999999999999999999999 4 479999999988763 2357999
Q ss_pred eehhhh---ccC---ChhH---------------HHHHHHHHHhhccCCcEEEEee
Q 042119 206 IFLAAL---VGM---SKEE---------------KLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 206 V~~aal---vg~---~~~~---------------k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
|++++- .|+ +++. ..++|+++.+.|||||+|++.+
T Consensus 179 Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsT 234 (456)
T 3m4x_A 179 IVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYST 234 (456)
T ss_dssp EEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 998542 111 1111 1278999999999999999854
No 205
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.21 E-value=2.2e-11 Score=106.12 Aligned_cols=104 Identities=14% Similarity=0.187 Sum_probs=80.4
Q ss_pred CCCCCEEEEeccCCChhhHHHHHhhcCC------CcEEEEEeCChHHHHHHHHHHHhcCCC----CCCeEEEEccccchh
Q 042119 128 VVQPKKVAFVGSGPMPLTSIIMAKHHLT------STHFDNFDIDEAANDVARSIVASDAEF----EGRMKFLTRDIMEVK 197 (286)
Q Consensus 128 ~~~~~~VL~IG~G~lp~tai~lA~~~~~------g~~V~~iDid~~ai~~Ar~~~~~~g~l----~~~i~f~~~D~~~~~ 197 (286)
+.++.+||+||||+ |..+..+++. .. ..+|+++|+++++++.|++.+...| + ..+++++++|+.+..
T Consensus 82 ~~~~~~VLdiG~G~-G~~~~~la~~-~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~-~~~~~~~~v~~~~~d~~~~~ 158 (227)
T 1r18_A 82 LKPGARILDVGSGS-GYLTACFYRY-IKAKGVDADTRIVGIEHQAELVRRSKANLNTDD-RSMLDSGQLLIVEGDGRKGY 158 (227)
T ss_dssp CCTTCEEEEESCTT-SHHHHHHHHH-HHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHH-HHHHHHTSEEEEESCGGGCC
T ss_pred CCCCCEEEEECCCc-cHHHHHHHHh-cccccCCccCEEEEEEcCHHHHHHHHHHHHhcC-ccccCCCceEEEECCcccCC
Confidence 57789999999997 5666677763 22 2599999999999999999988765 2 268999999997632
Q ss_pred hcCCCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEeec
Q 042119 198 EQLGEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRSA 241 (286)
Q Consensus 198 ~~l~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~~ 241 (286)
.+.+.||+|+...... .+.+++.+.|||||++++-..
T Consensus 159 ~~~~~fD~I~~~~~~~-------~~~~~~~~~LkpgG~lvi~~~ 195 (227)
T 1r18_A 159 PPNAPYNAIHVGAAAP-------DTPTELINQLASGGRLIVPVG 195 (227)
T ss_dssp GGGCSEEEEEECSCBS-------SCCHHHHHTEEEEEEEEEEES
T ss_pred CcCCCccEEEECCchH-------HHHHHHHHHhcCCCEEEEEEe
Confidence 2225799998776542 134678999999999998764
No 206
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.19 E-value=1.1e-10 Score=113.05 Aligned_cols=110 Identities=21% Similarity=0.244 Sum_probs=85.2
Q ss_pred CCCCCCEEEEeccCCChhhHHHHHhhcCCC-cEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcC--CCc
Q 042119 127 GVVQPKKVAFVGSGPMPLTSIIMAKHHLTS-THFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQL--GEY 203 (286)
Q Consensus 127 ~~~~~~~VL~IG~G~lp~tai~lA~~~~~g-~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l--~~f 203 (286)
.+.++.+|||+||||++.|. .+|+ ..++ ++|+++|+|+.+++.+++++++.| + .+++++++|+.+.+..+ +.|
T Consensus 256 ~~~~g~~VLDlgaG~G~~t~-~la~-~~~~~~~v~a~D~s~~~l~~~~~~~~~~g-~-~~v~~~~~D~~~~~~~~~~~~f 331 (450)
T 2yxl_A 256 DPKPGETVVDLAAAPGGKTT-HLAE-LMKNKGKIYAFDVDKMRMKRLKDFVKRMG-I-KIVKPLVKDARKAPEIIGEEVA 331 (450)
T ss_dssp CCCTTCEEEESSCTTCHHHH-HHHH-HTTTCSEEEEECSCHHHHHHHHHHHHHTT-C-CSEEEECSCTTCCSSSSCSSCE
T ss_pred CCCCcCEEEEeCCCccHHHH-HHHH-HcCCCCEEEEEcCCHHHHHHHHHHHHHcC-C-CcEEEEEcChhhcchhhccCCC
Confidence 46788999999999977665 4555 2455 899999999999999999999999 4 57999999998765333 469
Q ss_pred ceeehhh---hccC---ChhH---------------HHHHHHHHHhhccCCcEEEEee
Q 042119 204 DCIFLAA---LVGM---SKEE---------------KLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 204 D~V~~aa---lvg~---~~~~---------------k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
|+|++++ ..|. .++. ..++++++.+.|||||++++.+
T Consensus 332 D~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~t 389 (450)
T 2yxl_A 332 DKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTT 389 (450)
T ss_dssp EEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred CEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 9999742 1111 1111 1578999999999999999865
No 207
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.19 E-value=1.7e-11 Score=110.87 Aligned_cols=100 Identities=17% Similarity=0.149 Sum_probs=79.5
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhc--CCCCCCeEEEEccccchhhcCCCccee
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASD--AEFEGRMKFLTRDIMEVKEQLGEYDCI 206 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~--g~l~~~i~f~~~D~~~~~~~l~~fD~V 206 (286)
..+++||+||||. |.++..+++ + + .+|+++|+|+++++.|++.+... +.-.++++++.+|+.+.. +.||+|
T Consensus 71 ~~~~~VL~iG~G~-G~~~~~ll~-~-~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---~~fD~I 143 (262)
T 2cmg_A 71 KELKEVLIVDGFD-LELAHQLFK-Y-D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---KKYDLI 143 (262)
T ss_dssp SCCCEEEEESSCC-HHHHHHHTT-S-S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---CCEEEE
T ss_pred CCCCEEEEEeCCc-CHHHHHHHh-C-C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH---hhCCEE
Confidence 4678999999995 777777877 3 5 89999999999999999875431 101368999999997754 689999
Q ss_pred ehhhhccCChhHHHHHHHHHHhhccCCcEEEEeec
Q 042119 207 FLAALVGMSKEEKLTILGHIRKYMKDGGILLVRSA 241 (286)
Q Consensus 207 ~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~~ 241 (286)
+.++. +...+++.+.+.|+|||++++...
T Consensus 144 i~d~~------dp~~~~~~~~~~L~pgG~lv~~~~ 172 (262)
T 2cmg_A 144 FCLQE------PDIHRIDGLKRMLKEDGVFISVAK 172 (262)
T ss_dssp EESSC------CCHHHHHHHHTTEEEEEEEEEEEE
T ss_pred EECCC------ChHHHHHHHHHhcCCCcEEEEEcC
Confidence 98742 222499999999999999999753
No 208
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.18 E-value=6.6e-11 Score=115.71 Aligned_cols=108 Identities=14% Similarity=0.171 Sum_probs=84.0
Q ss_pred CCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhh-cCCCcceeeh
Q 042119 130 QPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKE-QLGEYDCIFL 208 (286)
Q Consensus 130 ~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~-~l~~fD~V~~ 208 (286)
++.+|||+||||++.|. .+|+....+++|+++|+|+.+++.+++++++.| + .+++++++|+.++.. ..+.||.|++
T Consensus 117 ~g~~VLDl~aGpG~kt~-~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g-~-~nv~~~~~D~~~~~~~~~~~fD~Il~ 193 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTT-QISARMNNEGAILANEFSASRVKVLHANISRCG-I-SNVALTHFDGRVFGAAVPEMFDAILL 193 (479)
T ss_dssp CCSEEEESSCTTSHHHH-HHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHT-C-CSEEEECCCSTTHHHHSTTCEEEEEE
T ss_pred CCCEEEEeCCCCCHHHH-HHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC-C-CcEEEEeCCHHHhhhhccccCCEEEE
Confidence 88999999999977665 456532345899999999999999999999999 4 579999999988765 3357999997
Q ss_pred hhh---ccC---C--------h-------hHHHHHHHHHHhhccCCcEEEEee
Q 042119 209 AAL---VGM---S--------K-------EEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 209 aal---vg~---~--------~-------~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
++- .|+ + . ....++|+++.+.|||||+|++.+
T Consensus 194 D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysT 246 (479)
T 2frx_A 194 DAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYST 246 (479)
T ss_dssp ECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEec
Confidence 421 111 1 0 113478999999999999999864
No 209
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.18 E-value=5.3e-11 Score=103.02 Aligned_cols=102 Identities=14% Similarity=0.155 Sum_probs=78.2
Q ss_pred HHHHHHhcCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhh
Q 042119 119 EYTILSENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKE 198 (286)
Q Consensus 119 E~~~l~~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~ 198 (286)
+...+.+.. ++.+||+||||+ |..+..+++ . +++|+|+++++.|++. +++++++|+.+++.
T Consensus 38 ~~~~l~~~~--~~~~vLDiG~G~-G~~~~~l~~---~----~~vD~s~~~~~~a~~~---------~~~~~~~d~~~~~~ 98 (219)
T 1vlm_A 38 ELQAVKCLL--PEGRGVEIGVGT-GRFAVPLKI---K----IGVEPSERMAEIARKR---------GVFVLKGTAENLPL 98 (219)
T ss_dssp HHHHHHHHC--CSSCEEEETCTT-STTHHHHTC---C----EEEESCHHHHHHHHHT---------TCEEEECBTTBCCS
T ss_pred HHHHHHHhC--CCCcEEEeCCCC-CHHHHHHHH---H----hccCCCHHHHHHHHhc---------CCEEEEcccccCCC
Confidence 334444444 388999999997 555566765 2 9999999999999886 47899999987665
Q ss_pred cCCCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 199 QLGEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 199 ~l~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
..+.||+|+....+.. .++...+++++.+.|+|||.+++..
T Consensus 99 ~~~~fD~v~~~~~l~~-~~~~~~~l~~~~~~L~pgG~l~i~~ 139 (219)
T 1vlm_A 99 KDESFDFALMVTTICF-VDDPERALKEAYRILKKGGYLIVGI 139 (219)
T ss_dssp CTTCEEEEEEESCGGG-SSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCeeEEEEcchHhh-ccCHHHHHHHHHHHcCCCcEEEEEE
Confidence 5457999987654321 2456789999999999999999875
No 210
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.18 E-value=2.4e-11 Score=115.46 Aligned_cols=110 Identities=12% Similarity=0.145 Sum_probs=81.9
Q ss_pred HHHhcCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCe-EEEEccccchhhcC
Q 042119 122 ILSENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRM-KFLTRDIMEVKEQL 200 (286)
Q Consensus 122 ~l~~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i-~f~~~D~~~~~~~l 200 (286)
.+......++.+|||||||+ |..+..+++ .|.+|+|+|+|+++++.|++. | +.... .|..+++.+++...
T Consensus 99 l~~~~~~~~~~~VLDiGcG~-G~~~~~l~~---~g~~v~gvD~s~~~~~~a~~~----~-~~~~~~~~~~~~~~~l~~~~ 169 (416)
T 4e2x_A 99 FLATELTGPDPFIVEIGCND-GIMLRTIQE---AGVRHLGFEPSSGVAAKAREK----G-IRVRTDFFEKATADDVRRTE 169 (416)
T ss_dssp HHHTTTCSSSCEEEEETCTT-TTTHHHHHH---TTCEEEEECCCHHHHHHHHTT----T-CCEECSCCSHHHHHHHHHHH
T ss_pred HHHHhCCCCCCEEEEecCCC-CHHHHHHHH---cCCcEEEECCCHHHHHHHHHc----C-CCcceeeechhhHhhcccCC
Confidence 33444567889999999997 667777887 578999999999999999876 4 22222 24445555555545
Q ss_pred CCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEeec
Q 042119 201 GEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRSA 241 (286)
Q Consensus 201 ~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~~ 241 (286)
+.||+|+....+.+ .++...+++++++.|||||++++...
T Consensus 170 ~~fD~I~~~~vl~h-~~d~~~~l~~~~r~LkpgG~l~i~~~ 209 (416)
T 4e2x_A 170 GPANVIYAANTLCH-IPYVQSVLEGVDALLAPDGVFVFEDP 209 (416)
T ss_dssp CCEEEEEEESCGGG-CTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCEEEEEECChHHh-cCCHHHHHHHHHHHcCCCeEEEEEeC
Confidence 68999986654422 25778999999999999999999753
No 211
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.18 E-value=8.3e-11 Score=114.63 Aligned_cols=110 Identities=15% Similarity=0.101 Sum_probs=84.9
Q ss_pred CCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhh-cCCCcce
Q 042119 127 GVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKE-QLGEYDC 205 (286)
Q Consensus 127 ~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~-~l~~fD~ 205 (286)
.+.++.+|||+||||++.| +.+|+....+++|+++|+|+.+++.+++++++.| +. ++++++|+.++.. ..+.||+
T Consensus 98 ~~~~g~~VLDlgaGpG~kt-~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G-~~--v~~~~~Da~~l~~~~~~~FD~ 173 (464)
T 3m6w_A 98 DPKPGERVLDLAAAPGGKT-THLAARMGGKGLLLANEVDGKRVRGLLENVERWG-AP--LAVTQAPPRALAEAFGTYFHR 173 (464)
T ss_dssp CCCTTCEEEESSCTTCHHH-HHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHC-CC--CEEECSCHHHHHHHHCSCEEE
T ss_pred CcCCCCEEEEEcCCcCHHH-HHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC-Ce--EEEEECCHHHhhhhccccCCE
Confidence 4678899999999997766 4555532344799999999999999999999999 44 9999999988763 3357999
Q ss_pred eehhhh---ccC---Ch---------------hHHHHHHHHHHhhccCCcEEEEee
Q 042119 206 IFLAAL---VGM---SK---------------EEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 206 V~~aal---vg~---~~---------------~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
|++++- .|+ +. ....++++++.+.|||||+|++.+
T Consensus 174 Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysT 229 (464)
T 3m6w_A 174 VLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYST 229 (464)
T ss_dssp EEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred EEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 996431 111 11 112679999999999999999854
No 212
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.18 E-value=5.5e-11 Score=110.81 Aligned_cols=98 Identities=15% Similarity=0.199 Sum_probs=82.1
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeeh
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFL 208 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~ 208 (286)
.++.+|||+|||++++ ++. |+ .+.+|+++|+|+++++.|+++++..| +.++++|+++|+.+.. ..||+|++
T Consensus 194 ~~~~~VLDlg~G~G~~-~l~-a~---~~~~V~~vD~s~~ai~~a~~n~~~n~-l~~~v~~~~~D~~~~~---~~fD~Vi~ 264 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPF-SIA-CK---NAKKIYAIDINPHAIELLKKNIKLNK-LEHKIIPILSDVREVD---VKGNRVIM 264 (336)
T ss_dssp CTTCEEEETTCTTSHH-HHH-TT---TSSEEEEEESCHHHHHHHHHHHHHTT-CTTTEEEEESCGGGCC---CCEEEEEE
T ss_pred CCCCEEEEccCccCHH-HHh-cc---CCCEEEEEECCHHHHHHHHHHHHHcC-CCCcEEEEECChHHhc---CCCcEEEE
Confidence 5789999999997555 455 76 57899999999999999999999999 6778999999998765 68999997
Q ss_pred hhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 209 AALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 209 aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
+-.- ...++++.+.+.++|||.+++.+
T Consensus 265 dpP~-----~~~~~l~~~~~~L~~gG~l~~~~ 291 (336)
T 2yx1_A 265 NLPK-----FAHKFIDKALDIVEEGGVIHYYT 291 (336)
T ss_dssp CCTT-----TGGGGHHHHHHHEEEEEEEEEEE
T ss_pred CCcH-----hHHHHHHHHHHHcCCCCEEEEEE
Confidence 6221 11278999999999999998875
No 213
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.18 E-value=6.3e-10 Score=94.96 Aligned_cols=104 Identities=17% Similarity=0.150 Sum_probs=78.2
Q ss_pred hcCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcc
Q 042119 125 ENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYD 204 (286)
Q Consensus 125 ~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD 204 (286)
.....++.+|||+|||+ |..++.+++. ...+|+|+|+|+.+++.|++.+...| + +++++++|+.+++ ..||
T Consensus 44 ~~~~~~~~~vlD~g~G~-G~~~~~l~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~-~--~~~~~~~d~~~~~---~~~D 114 (207)
T 1wy7_A 44 SLGDIEGKVVADLGAGT-GVLSYGALLL--GAKEVICVEVDKEAVDVLIENLGEFK-G--KFKVFIGDVSEFN---SRVD 114 (207)
T ss_dssp HTTSSTTCEEEEETCTT-CHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHTGGGT-T--SEEEEESCGGGCC---CCCS
T ss_pred HcCCCCcCEEEEeeCCC-CHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHHHHcC-C--CEEEEECchHHcC---CCCC
Confidence 33456789999999997 5556777772 33489999999999999999998888 4 7999999998753 4799
Q ss_pred eeehhhhccC-ChhHHHHHHHHHHhhccCCcEEEEe
Q 042119 205 CIFLAALVGM-SKEEKLTILGHIRKYMKDGGILLVR 239 (286)
Q Consensus 205 ~V~~aalvg~-~~~~k~~vl~~l~~~l~pgg~lv~r 239 (286)
+|+...-.+. ......++++.+.+.+ |++++..
T Consensus 115 ~v~~~~p~~~~~~~~~~~~l~~~~~~l--~~~~~~~ 148 (207)
T 1wy7_A 115 IVIMNPPFGSQRKHADRPFLLKAFEIS--DVVYSIH 148 (207)
T ss_dssp EEEECCCCSSSSTTTTHHHHHHHHHHC--SEEEEEE
T ss_pred EEEEcCCCccccCCchHHHHHHHHHhc--CcEEEEE
Confidence 9997642211 1133456889999888 6766655
No 214
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.17 E-value=8.7e-11 Score=107.37 Aligned_cols=103 Identities=15% Similarity=0.094 Sum_probs=84.0
Q ss_pred CCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceee
Q 042119 128 VVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIF 207 (286)
Q Consensus 128 ~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~ 207 (286)
.+++++|||+|||.++++ +.+|++ ..++|+++|+||.+++.++++++..| ++++++++++|+.++... ..||.|+
T Consensus 123 ~~~g~~VlD~~aG~G~~~-i~~a~~--g~~~V~avD~np~a~~~~~~N~~~N~-v~~~v~~~~~D~~~~~~~-~~~D~Vi 197 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLS-LPIAVY--GKAKVIAIEKDPYTFKFLVENIHLNK-VEDRMSAYNMDNRDFPGE-NIADRIL 197 (278)
T ss_dssp CCTTCEEEETTCTTTTTT-HHHHHH--TCCEEEEECCCHHHHHHHHHHHHHTT-CTTTEEEECSCTTTCCCC-SCEEEEE
T ss_pred cCCCCEEEEecCcCcHHH-HHHHHh--cCCeEEEEECCHHHHHHHHHHHHHcC-CCCcEEEEeCcHHHhccc-cCCCEEE
Confidence 478999999999987665 666762 55799999999999999999999999 899999999999886643 4799988
Q ss_pred hhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 208 LAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 208 ~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
+.-. ....+++....+.++|||.|.+..
T Consensus 198 ~~~p-----~~~~~~l~~a~~~lk~gG~ih~~~ 225 (278)
T 3k6r_A 198 MGYV-----VRTHEFIPKALSIAKDGAIIHYHN 225 (278)
T ss_dssp ECCC-----SSGGGGHHHHHHHEEEEEEEEEEE
T ss_pred ECCC-----CcHHHHHHHHHHHcCCCCEEEEEe
Confidence 6532 122357888899999999987653
No 215
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.17 E-value=1.3e-10 Score=111.05 Aligned_cols=107 Identities=15% Similarity=0.096 Sum_probs=82.6
Q ss_pred CCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcC-CCccee
Q 042119 128 VVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQL-GEYDCI 206 (286)
Q Consensus 128 ~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l-~~fD~V 206 (286)
..++++|||+|||+++ -++.+|+ .|+.|+++|+|+.+++.|+++++..| +.. ++.++|+.+....+ +.||+|
T Consensus 212 ~~~g~~VLDlg~GtG~-~sl~~a~---~ga~V~avDis~~al~~a~~n~~~ng-~~~--~~~~~D~~~~l~~~~~~fD~I 284 (393)
T 4dmg_A 212 VRPGERVLDVYSYVGG-FALRAAR---KGAYALAVDKDLEALGVLDQAALRLG-LRV--DIRHGEALPTLRGLEGPFHHV 284 (393)
T ss_dssp CCTTCEEEEESCTTTH-HHHHHHH---TTCEEEEEESCHHHHHHHHHHHHHHT-CCC--EEEESCHHHHHHTCCCCEEEE
T ss_pred hcCCCeEEEcccchhH-HHHHHHH---cCCeEEEEECCHHHHHHHHHHHHHhC-CCC--cEEEccHHHHHHHhcCCCCEE
Confidence 3568999999999755 4577777 57889999999999999999999999 543 57799998865443 359999
Q ss_pred ehhhhc-cCC-------hhHHHHHHHHHHhhccCCcEEEEeec
Q 042119 207 FLAALV-GMS-------KEEKLTILGHIRKYMKDGGILLVRSA 241 (286)
Q Consensus 207 ~~aalv-g~~-------~~~k~~vl~~l~~~l~pgg~lv~r~~ 241 (286)
+++.-- ... .....+++..+.+.|+|||.+++-+-
T Consensus 285 i~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~ 327 (393)
T 4dmg_A 285 LLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSC 327 (393)
T ss_dssp EECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred EECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 975321 000 13456899999999999999997653
No 216
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.17 E-value=1.1e-10 Score=110.78 Aligned_cols=109 Identities=21% Similarity=0.150 Sum_probs=85.3
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhc----CCCcc
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQ----LGEYD 204 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~----l~~fD 204 (286)
.++++|||+|||+ |.-++.+|+ ....+|+++|+|+++++.|+++++..| +.++++|+++|+.+.... ...||
T Consensus 216 ~~~~~VLDl~~G~-G~~~~~la~--~g~~~v~~vD~s~~~l~~a~~n~~~n~-~~~~v~~~~~d~~~~~~~~~~~~~~fD 291 (396)
T 2as0_A 216 QPGDRVLDVFTYT-GGFAIHAAI--AGADEVIGIDKSPRAIETAKENAKLNG-VEDRMKFIVGSAFEEMEKLQKKGEKFD 291 (396)
T ss_dssp CTTCEEEETTCTT-THHHHHHHH--TTCSEEEEEESCHHHHHHHHHHHHHTT-CGGGEEEEESCHHHHHHHHHHTTCCEE
T ss_pred hCCCeEEEecCCC-CHHHHHHHH--CCCCEEEEEeCCHHHHHHHHHHHHHcC-CCccceEEECCHHHHHHHHHhhCCCCC
Confidence 4789999999997 455677777 223499999999999999999999999 666899999999876543 34799
Q ss_pred eeehhhhc-cCC-------hhHHHHHHHHHHhhccCCcEEEEeec
Q 042119 205 CIFLAALV-GMS-------KEEKLTILGHIRKYMKDGGILLVRSA 241 (286)
Q Consensus 205 ~V~~aalv-g~~-------~~~k~~vl~~l~~~l~pgg~lv~r~~ 241 (286)
+|+++.-- +.. .....+++..+.+.|+|||.+++.+-
T Consensus 292 ~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 336 (396)
T 2as0_A 292 IVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSC 336 (396)
T ss_dssp EEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEEC
T ss_pred EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEC
Confidence 99975311 111 14456789999999999999888763
No 217
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.16 E-value=3.1e-11 Score=120.05 Aligned_cols=103 Identities=16% Similarity=0.195 Sum_probs=77.0
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhc--CCCccee
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQ--LGEYDCI 206 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~--l~~fD~V 206 (286)
..|.|||||||| +|+-+..||+ .|++|||||+++.+++.|+..+...|. -+|+|.++|+.++... .+.||+|
T Consensus 65 ~~~~~vLDvGCG-~G~~~~~la~---~ga~V~giD~~~~~i~~a~~~a~~~~~--~~~~~~~~~~~~~~~~~~~~~fD~v 138 (569)
T 4azs_A 65 GRPLNVLDLGCA-QGFFSLSLAS---KGATIVGIDFQQENINVCRALAEENPD--FAAEFRVGRIEEVIAALEEGEFDLA 138 (569)
T ss_dssp TSCCEEEEETCT-TSHHHHHHHH---TTCEEEEEESCHHHHHHHHHHHHTSTT--SEEEEEECCHHHHHHHCCTTSCSEE
T ss_pred CCCCeEEEECCC-CcHHHHHHHh---CCCEEEEECCCHHHHHHHHHHHHhcCC--CceEEEECCHHHHhhhccCCCccEE
Confidence 467899999999 6889999999 799999999999999999999988873 4799999999987543 3579999
Q ss_pred ehhhhcc-CChhHHHHHHHHHHhhccCCcEEE
Q 042119 207 FLAALVG-MSKEEKLTILGHIRKYMKDGGILL 237 (286)
Q Consensus 207 ~~aalvg-~~~~~k~~vl~~l~~~l~pgg~lv 237 (286)
+....+. .+.++...-+..+.+.+++++...
T Consensus 139 ~~~e~~ehv~~~~~~~~~~~~~~tl~~~~~~~ 170 (569)
T 4azs_A 139 IGLSVFHHIVHLHGIDEVKRLLSRLADVTQAV 170 (569)
T ss_dssp EEESCHHHHHHHHCHHHHHHHHHHHHHHSSEE
T ss_pred EECcchhcCCCHHHHHHHHHHHHHhcccccee
Confidence 7554431 111222223345666667766443
No 218
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.15 E-value=8.6e-11 Score=96.13 Aligned_cols=137 Identities=12% Similarity=0.108 Sum_probs=88.5
Q ss_pred CCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchh--------hc
Q 042119 128 VVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVK--------EQ 199 (286)
Q Consensus 128 ~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~--------~~ 199 (286)
..++.+|||+|||+ |..+..+++...++.+|+++|+++ +++. .+++++++|+.+.+ ..
T Consensus 20 ~~~~~~vLd~G~G~-G~~~~~l~~~~~~~~~v~~~D~~~-~~~~------------~~~~~~~~d~~~~~~~~~~~~~~~ 85 (180)
T 1ej0_A 20 FKPGMTVVDLGAAP-GGWSQYVVTQIGGKGRIIACDLLP-MDPI------------VGVDFLQGDFRDELVMKALLERVG 85 (180)
T ss_dssp CCTTCEEEEESCTT-CHHHHHHHHHHCTTCEEEEEESSC-CCCC------------TTEEEEESCTTSHHHHHHHHHHHT
T ss_pred CCCCCeEEEeCCCC-CHHHHHHHHHhCCCCeEEEEECcc-cccc------------CcEEEEEcccccchhhhhhhccCC
Confidence 57788999999997 556667777323679999999999 6421 47999999998764 34
Q ss_pred CCCcceeehhhhccC---ChhH-H------HHHHHHHHhhccCCcEEEEeecCcceeeecccCCcccc-cCcEEEEEecC
Q 042119 200 LGEYDCIFLAALVGM---SKEE-K------LTILGHIRKYMKDGGILLVRSAKGARAFLYPVVVEHDL-LDFEVLSAVHP 268 (286)
Q Consensus 200 l~~fD~V~~aalvg~---~~~~-k------~~vl~~l~~~l~pgg~lv~r~~~g~r~~lyp~v~~~~l-~gf~~~~~~~P 268 (286)
.+.||+|+......+ ...+ . ..+++++.+.|+|||.+++.....-.. ..+ ...+ ..|+.+.+.+|
T Consensus 86 ~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~ 161 (180)
T 1ej0_A 86 DSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGF---DEY-LREIRSLFTKVKVRKP 161 (180)
T ss_dssp TCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESSTTH---HHH-HHHHHHHEEEEEEECC
T ss_pred CCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCCcH---HHH-HHHHHHhhhhEEeecC
Confidence 457999997543211 1011 1 589999999999999999865322100 000 0011 24777776666
Q ss_pred ccc---ceeeeEEEeec
Q 042119 269 NDD---VINSVVLVRNS 282 (286)
Q Consensus 269 ~~~---vinsvi~~r~~ 282 (286)
... .-..++++++.
T Consensus 162 ~~~~~~~~~~~~~~~~~ 178 (180)
T 1ej0_A 162 DSSRARSREVYIVATGR 178 (180)
T ss_dssp TTSCTTCCEEEEEEEEE
T ss_pred CcccccCceEEEEEccC
Confidence 542 22335666553
No 219
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.15 E-value=1.9e-10 Score=108.62 Aligned_cols=107 Identities=11% Similarity=0.065 Sum_probs=81.8
Q ss_pred CCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceee
Q 042119 128 VVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIF 207 (286)
Q Consensus 128 ~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~ 207 (286)
..++.+|||+|||+ |..++.+|+ ..+.++|+|+|+|+.+++.|+++++..| +.++++|.++|+.+++...+.||+|+
T Consensus 215 ~~~~~~vLD~gCGs-G~~~i~~a~-~~~~~~v~g~Dis~~~l~~A~~n~~~~g-l~~~i~~~~~D~~~~~~~~~~fD~Ii 291 (373)
T 3tm4_A 215 ELDGGSVLDPMCGS-GTILIELAL-RRYSGEIIGIEKYRKHLIGAEMNALAAG-VLDKIKFIQGDATQLSQYVDSVDFAI 291 (373)
T ss_dssp TCCSCCEEETTCTT-CHHHHHHHH-TTCCSCEEEEESCHHHHHHHHHHHHHTT-CGGGCEEEECCGGGGGGTCSCEEEEE
T ss_pred cCCCCEEEEccCcC-cHHHHHHHH-hCCCCeEEEEeCCHHHHHHHHHHHHHcC-CCCceEEEECChhhCCcccCCcCEEE
Confidence 57889999999997 556677777 2334499999999999999999999999 77899999999999876667899998
Q ss_pred hhhhccC-------ChhHHHHHHHHHHhhccCCcEEEE
Q 042119 208 LAALVGM-------SKEEKLTILGHIRKYMKDGGILLV 238 (286)
Q Consensus 208 ~aalvg~-------~~~~k~~vl~~l~~~l~pgg~lv~ 238 (286)
..---|. ......++++.+.+.+ +|+.+++
T Consensus 292 ~npPyg~r~~~~~~~~~ly~~~~~~l~r~l-~g~~~~i 328 (373)
T 3tm4_A 292 SNLPYGLKIGKKSMIPDLYMKFFNELAKVL-EKRGVFI 328 (373)
T ss_dssp EECCCC------CCHHHHHHHHHHHHHHHE-EEEEEEE
T ss_pred ECCCCCcccCcchhHHHHHHHHHHHHHHHc-CCeEEEE
Confidence 7422111 1123467889999988 3333333
No 220
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.14 E-value=2.4e-10 Score=109.76 Aligned_cols=109 Identities=17% Similarity=0.153 Sum_probs=84.6
Q ss_pred CCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhh--cCCCcc
Q 042119 127 GVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKE--QLGEYD 204 (286)
Q Consensus 127 ~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~--~l~~fD 204 (286)
.+.++.+|||+||||++.|. .+|+ ..++++|+++|+|+.+++.+++.+++.| + +++++++|+.+... ..+.||
T Consensus 243 ~~~~g~~VLDlgaG~G~~t~-~la~-~~~~~~v~a~D~~~~~l~~~~~~~~~~g-~--~~~~~~~D~~~~~~~~~~~~fD 317 (429)
T 1sqg_A 243 APQNGEHILDLCAAPGGKTT-HILE-VAPEAQVVAVDIDEQRLSRVYDNLKRLG-M--KATVKQGDGRYPSQWCGEQQFD 317 (429)
T ss_dssp CCCTTCEEEEESCTTCHHHH-HHHH-HCTTCEEEEEESSTTTHHHHHHHHHHTT-C--CCEEEECCTTCTHHHHTTCCEE
T ss_pred CCCCcCeEEEECCCchHHHH-HHHH-HcCCCEEEEECCCHHHHHHHHHHHHHcC-C--CeEEEeCchhhchhhcccCCCC
Confidence 45788999999999977665 5555 3566899999999999999999999999 4 58999999987653 224799
Q ss_pred eeehhh---hcc---CChhH---------------HHHHHHHHHhhccCCcEEEEee
Q 042119 205 CIFLAA---LVG---MSKEE---------------KLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 205 ~V~~aa---lvg---~~~~~---------------k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
.|++++ ..| ...+. ..++++++.+.|||||++++.+
T Consensus 318 ~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvyst 374 (429)
T 1sqg_A 318 RILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYAT 374 (429)
T ss_dssp EEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred EEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 999743 111 11111 1478999999999999999975
No 221
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.14 E-value=1.8e-10 Score=109.43 Aligned_cols=109 Identities=19% Similarity=0.186 Sum_probs=85.6
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCC-CCCeEEEEccccchhhc----CCCc
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEF-EGRMKFLTRDIMEVKEQ----LGEY 203 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l-~~~i~f~~~D~~~~~~~----l~~f 203 (286)
.++++|||+|||++++ ++.+|+. ...+|+++|+|+++++.|+++++..| + .++++|+++|+.+.... -..|
T Consensus 219 ~~~~~VLDl~cG~G~~-sl~la~~--g~~~V~~vD~s~~al~~a~~n~~~ng-l~~~~v~~~~~D~~~~~~~~~~~~~~f 294 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGF-AVSALMG--GCSQVVSVDTSQEALDIARQNVELNK-LDLSKAEFVRDDVFKLLRTYRDRGEKF 294 (396)
T ss_dssp CTTCEEEEESCTTCSH-HHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHTT-CCGGGEEEEESCHHHHHHHHHHTTCCE
T ss_pred hCCCeEEEeeccCCHH-HHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcC-CCccceEEEECCHHHHHHHHHhcCCCC
Confidence 5788999999997555 5677771 24599999999999999999999988 6 55899999999886543 2479
Q ss_pred ceeehhhhc-c-------CChhHHHHHHHHHHhhccCCcEEEEeec
Q 042119 204 DCIFLAALV-G-------MSKEEKLTILGHIRKYMKDGGILLVRSA 241 (286)
Q Consensus 204 D~V~~aalv-g-------~~~~~k~~vl~~l~~~l~pgg~lv~r~~ 241 (286)
|+|+++.-- + .......+++..+.+.|+|||++++.+.
T Consensus 295 D~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 340 (396)
T 3c0k_A 295 DVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSC 340 (396)
T ss_dssp EEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred CEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 999986311 0 0114566899999999999999998763
No 222
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.13 E-value=1.8e-10 Score=103.47 Aligned_cols=102 Identities=14% Similarity=0.168 Sum_probs=78.6
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeeh
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFL 208 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~ 208 (286)
.+|.+|||||||.+|++.-++ ++.+++++|||+.+++.+++.+...| .+.+|.++|....+.. +.||+|+.
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~-----~~~~y~a~DId~~~i~~ar~~~~~~g---~~~~~~v~D~~~~~~~-~~~DvvLl 174 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER-----GIASVWGCDIHQGLGDVITPFAREKD---WDFTFALQDVLCAPPA-EAGDLALI 174 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT-----TCSEEEEEESBHHHHHHHHHHHHHTT---CEEEEEECCTTTSCCC-CBCSEEEE
T ss_pred CCCCeEEEecCCccHHHHHhc-----cCCeEEEEeCCHHHHHHHHHHHHhcC---CCceEEEeecccCCCC-CCcchHHH
Confidence 568999999999877764433 78999999999999999999988877 4789999998764433 47999975
Q ss_pred hhhc-cCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 209 AALV-GMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 209 aalv-g~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
.-++ .+..++|...+ .+...|++++++|--.
T Consensus 175 lk~lh~LE~q~~~~~~-~ll~aL~~~~vvVsfP 206 (253)
T 3frh_A 175 FKLLPLLEREQAGSAM-ALLQSLNTPRMAVSFP 206 (253)
T ss_dssp ESCHHHHHHHSTTHHH-HHHHHCBCSEEEEEEE
T ss_pred HHHHHHhhhhchhhHH-HHHHHhcCCCEEEEcC
Confidence 5222 22334555555 8888999999888754
No 223
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.13 E-value=1.1e-10 Score=100.27 Aligned_cols=98 Identities=14% Similarity=0.288 Sum_probs=76.2
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccch--hhcCCCccee
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEV--KEQLGEYDCI 206 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~--~~~l~~fD~V 206 (286)
.++.+|||||||+ |..+..+++ .|.+|+++|+|+++++.|++.. .+++++|+.+. +...+.||+|
T Consensus 31 ~~~~~vLdiG~G~-G~~~~~l~~---~~~~~~~~D~~~~~~~~~~~~~---------~~~~~~d~~~~~~~~~~~~fD~v 97 (230)
T 3cc8_A 31 KEWKEVLDIGCSS-GALGAAIKE---NGTRVSGIEAFPEAAEQAKEKL---------DHVVLGDIETMDMPYEEEQFDCV 97 (230)
T ss_dssp TTCSEEEEETCTT-SHHHHHHHT---TTCEEEEEESSHHHHHHHHTTS---------SEEEESCTTTCCCCSCTTCEEEE
T ss_pred cCCCcEEEeCCCC-CHHHHHHHh---cCCeEEEEeCCHHHHHHHHHhC---------CcEEEcchhhcCCCCCCCccCEE
Confidence 6789999999996 566677777 2699999999999999888641 27899998763 2233579999
Q ss_pred ehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 207 FLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 207 ~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
+....... ..+..++++++.+.|+|||.+++..
T Consensus 98 ~~~~~l~~-~~~~~~~l~~~~~~L~~gG~l~~~~ 130 (230)
T 3cc8_A 98 IFGDVLEH-LFDPWAVIEKVKPYIKQNGVILASI 130 (230)
T ss_dssp EEESCGGG-SSCHHHHHHHTGGGEEEEEEEEEEE
T ss_pred EECChhhh-cCCHHHHHHHHHHHcCCCCEEEEEe
Confidence 86544322 2355689999999999999999975
No 224
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.12 E-value=1.4e-10 Score=109.37 Aligned_cols=99 Identities=12% Similarity=0.117 Sum_probs=77.0
Q ss_pred CCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcC---------
Q 042119 130 QPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQL--------- 200 (286)
Q Consensus 130 ~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l--------- 200 (286)
.+.+|||+|||++ .-++.+|+ ...+|+++|+|++|++.|+++++..| + ++++|+++|+.+....+
T Consensus 213 ~~~~vLDl~cG~G-~~~l~la~---~~~~V~gvd~~~~ai~~a~~n~~~ng-~-~~v~~~~~d~~~~~~~~~~~~~~~~l 286 (369)
T 3bt7_A 213 SKGDLLELYCGNG-NFSLALAR---NFDRVLATEIAKPSVAAAQYNIAANH-I-DNVQIIRMAAEEFTQAMNGVREFNRL 286 (369)
T ss_dssp CCSEEEEESCTTS-HHHHHHGG---GSSEEEEECCCHHHHHHHHHHHHHTT-C-CSEEEECCCSHHHHHHHSSCCCCTTG
T ss_pred CCCEEEEccCCCC-HHHHHHHh---cCCEEEEEECCHHHHHHHHHHHHHcC-C-CceEEEECCHHHHHHHHhhccccccc
Confidence 3689999999974 55568887 46799999999999999999999999 4 68999999998764322
Q ss_pred -------CCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEeec
Q 042119 201 -------GEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRSA 241 (286)
Q Consensus 201 -------~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~~ 241 (286)
..||+|+++- ++..+...+.+.++|+|.+++-+-
T Consensus 287 ~~~~~~~~~fD~Vv~dP-------Pr~g~~~~~~~~l~~~g~ivyvsc 327 (369)
T 3bt7_A 287 QGIDLKSYQCETIFVDP-------PRSGLDSETEKMVQAYPRILYISC 327 (369)
T ss_dssp GGSCGGGCCEEEEEECC-------CTTCCCHHHHHHHTTSSEEEEEES
T ss_pred cccccccCCCCEEEECc-------CccccHHHHHHHHhCCCEEEEEEC
Confidence 2699998762 222344556667778999888763
No 225
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.12 E-value=1.4e-10 Score=109.10 Aligned_cols=99 Identities=20% Similarity=0.270 Sum_probs=79.5
Q ss_pred CCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceee
Q 042119 128 VVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIF 207 (286)
Q Consensus 128 ~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~ 207 (286)
..+..+|||||||+ |..+..+++ .+|+.+++++|+ |++++.|++. .+++|+.+|..+ +.+ .. |+|+
T Consensus 201 ~~~~~~vlDvG~G~-G~~~~~l~~-~~p~~~~~~~D~-~~~~~~a~~~--------~~v~~~~~d~~~-~~p-~~-D~v~ 266 (368)
T 3reo_A 201 FEGLTTIVDVGGGT-GAVASMIVA-KYPSINAINFDL-PHVIQDAPAF--------SGVEHLGGDMFD-GVP-KG-DAIF 266 (368)
T ss_dssp TTTCSEEEEETCTT-SHHHHHHHH-HCTTCEEEEEEC-HHHHTTCCCC--------TTEEEEECCTTT-CCC-CC-SEEE
T ss_pred ccCCCEEEEeCCCc-CHHHHHHHH-hCCCCEEEEEeh-HHHHHhhhhc--------CCCEEEecCCCC-CCC-CC-CEEE
Confidence 46678999999996 666777777 479999999999 9998777642 579999999875 333 23 9998
Q ss_pred hhhhc-cCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 208 LAALV-GMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 208 ~aalv-g~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
+...+ .++.++..++|+++++.|+|||+|++.+
T Consensus 267 ~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e 300 (368)
T 3reo_A 267 IKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAE 300 (368)
T ss_dssp EESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred EechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 76544 5676777899999999999999998865
No 226
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.11 E-value=1.9e-10 Score=108.10 Aligned_cols=99 Identities=17% Similarity=0.195 Sum_probs=79.8
Q ss_pred CCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceee
Q 042119 128 VVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIF 207 (286)
Q Consensus 128 ~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~ 207 (286)
..+..+|||||||+ |..+..+++ .+|+.+++++|+ |++++.|++. ++++|+.+|..+ +.+ .. |+|+
T Consensus 199 ~~~~~~vlDvG~G~-G~~~~~l~~-~~p~~~~~~~D~-~~~~~~a~~~--------~~v~~~~~D~~~-~~p-~~-D~v~ 264 (364)
T 3p9c_A 199 FEGLGTLVDVGGGV-GATVAAIAA-HYPTIKGVNFDL-PHVISEAPQF--------PGVTHVGGDMFK-EVP-SG-DTIL 264 (364)
T ss_dssp TTTCSEEEEETCTT-SHHHHHHHH-HCTTCEEEEEEC-HHHHTTCCCC--------TTEEEEECCTTT-CCC-CC-SEEE
T ss_pred ccCCCEEEEeCCCC-CHHHHHHHH-HCCCCeEEEecC-HHHHHhhhhc--------CCeEEEeCCcCC-CCC-CC-CEEE
Confidence 46779999999997 566677776 479999999999 8888776641 589999999876 433 23 9998
Q ss_pred hhhhc-cCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 208 LAALV-GMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 208 ~aalv-g~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
+...+ .++.++..++|+++++.|+|||+|++.+
T Consensus 265 ~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e 298 (364)
T 3p9c_A 265 MKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQ 298 (364)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred ehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 76544 5677778899999999999999998865
No 227
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.10 E-value=2.9e-10 Score=115.90 Aligned_cols=108 Identities=10% Similarity=0.202 Sum_probs=85.4
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCc-EEEEEeCChHHHHHHHHHHHhcCCCC-CCeEEEEccccchhhcC-CCcce
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTST-HFDNFDIDEAANDVARSIVASDAEFE-GRMKFLTRDIMEVKEQL-GEYDC 205 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~-~V~~iDid~~ai~~Ar~~~~~~g~l~-~~i~f~~~D~~~~~~~l-~~fD~ 205 (286)
.++++||++|||++++ ++.+|+ .|+ +|+++|+|+.++++|+++++..| +. ++++|+++|+.+..... +.||+
T Consensus 538 ~~g~~VLDlg~GtG~~-sl~aa~---~ga~~V~aVD~s~~al~~a~~N~~~ng-l~~~~v~~i~~D~~~~l~~~~~~fD~ 612 (703)
T 3v97_A 538 SKGKDFLNLFSYTGSA-TVHAGL---GGARSTTTVDMSRTYLEWAERNLRLNG-LTGRAHRLIQADCLAWLREANEQFDL 612 (703)
T ss_dssp CTTCEEEEESCTTCHH-HHHHHH---TTCSEEEEEESCHHHHHHHHHHHHHTT-CCSTTEEEEESCHHHHHHHCCCCEEE
T ss_pred cCCCcEEEeeechhHH-HHHHHH---CCCCEEEEEeCCHHHHHHHHHHHHHcC-CCccceEEEecCHHHHHHhcCCCccE
Confidence 4689999999998665 466666 444 69999999999999999999999 65 68999999998854433 47999
Q ss_pred eehhhhc-c---------CChhHHHHHHHHHHhhccCCcEEEEeec
Q 042119 206 IFLAALV-G---------MSKEEKLTILGHIRKYMKDGGILLVRSA 241 (286)
Q Consensus 206 V~~aalv-g---------~~~~~k~~vl~~l~~~l~pgg~lv~r~~ 241 (286)
|+++.-- + .......+++..+.+.|+|||+|++...
T Consensus 613 Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~ 658 (703)
T 3v97_A 613 IFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNN 658 (703)
T ss_dssp EEECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEEC
Confidence 9975310 0 0124667899999999999999998763
No 228
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.10 E-value=1.8e-10 Score=104.92 Aligned_cols=78 Identities=13% Similarity=0.200 Sum_probs=63.4
Q ss_pred hcCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcc
Q 042119 125 ENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYD 204 (286)
Q Consensus 125 ~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD 204 (286)
...+.++.+|||||||++. .+..+++ .+.+|+++|+|+.+++.+++.+...| +.++++++++|+.+.+ +..||
T Consensus 23 ~~~~~~~~~VLDiG~G~G~-lt~~L~~---~~~~v~~vD~~~~~~~~a~~~~~~~~-~~~~v~~~~~D~~~~~--~~~fD 95 (285)
T 1zq9_A 23 KAALRPTDVVLEVGPGTGN-MTVKLLE---KAKKVVACELDPRLVAELHKRVQGTP-VASKLQVLVGDVLKTD--LPFFD 95 (285)
T ss_dssp HTCCCTTCEEEEECCTTST-THHHHHH---HSSEEEEEESCHHHHHHHHHHHTTST-TGGGEEEEESCTTTSC--CCCCS
T ss_pred hcCCCCCCEEEEEcCcccH-HHHHHHh---hCCEEEEEECCHHHHHHHHHHHHhcC-CCCceEEEEcceeccc--chhhc
Confidence 4456788999999999755 4566776 36799999999999999999988777 5568999999997653 45799
Q ss_pred eeehh
Q 042119 205 CIFLA 209 (286)
Q Consensus 205 ~V~~a 209 (286)
+|+..
T Consensus 96 ~vv~n 100 (285)
T 1zq9_A 96 TCVAN 100 (285)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 98864
No 229
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.10 E-value=8.7e-11 Score=106.56 Aligned_cols=105 Identities=13% Similarity=0.122 Sum_probs=83.3
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeeh
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFL 208 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~ 208 (286)
.++.+|||||||.+|++..++.. .+.++++++|+|+.+++.+++++..+|. +.++.++|....+ .-+.||+|+.
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~--~p~a~y~a~DId~~~le~a~~~l~~~g~---~~~~~v~D~~~~~-p~~~~DvaL~ 204 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGL--PAETVYIASDIDARLVGFVDEALTRLNV---PHRTNVADLLEDR-LDEPADVTLL 204 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTC--CTTCEEEEEESBHHHHHHHHHHHHHTTC---CEEEEECCTTTSC-CCSCCSEEEE
T ss_pred CCCceeeeeccCccHHHHHHHhh--CCCCEEEEEeCCHHHHHHHHHHHHhcCC---CceEEEeeecccC-CCCCcchHHH
Confidence 45889999999988887665543 5899999999999999999999999993 4899999985433 2357999976
Q ss_pred hhhc-cCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 209 AALV-GMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 209 aalv-g~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
.-++ .+..+.|...+ .+...|+|||++|--.
T Consensus 205 lkti~~Le~q~kg~g~-~ll~aL~~~~vvVSfp 236 (281)
T 3lcv_B 205 LKTLPCLETQQRGSGW-EVIDIVNSPNIVVTFP 236 (281)
T ss_dssp TTCHHHHHHHSTTHHH-HHHHHSSCSEEEEEEE
T ss_pred HHHHHHhhhhhhHHHH-HHHHHhCCCCEEEecc
Confidence 5444 33455666666 8999999999998754
No 230
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.10 E-value=4.7e-10 Score=95.15 Aligned_cols=134 Identities=16% Similarity=0.210 Sum_probs=83.5
Q ss_pred CCCCCEEEEeccCCChhhHHHHHhhcCC--CcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchh--------
Q 042119 128 VVQPKKVAFVGSGPMPLTSIIMAKHHLT--STHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVK-------- 197 (286)
Q Consensus 128 ~~~~~~VL~IG~G~lp~tai~lA~~~~~--g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~-------- 197 (286)
..++.+|||||||++.+| ..++++ .+ +++|+|+|+++.+ . ..+++|+++|+.+..
T Consensus 20 ~~~~~~vLDlGcG~G~~~-~~l~~~-~~~~~~~v~gvD~s~~~-----------~--~~~v~~~~~d~~~~~~~~~~~~~ 84 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWC-QVILER-TKNYKNKIIGIDKKIMD-----------P--IPNVYFIQGEIGKDNMNNIKNIN 84 (201)
T ss_dssp CCTTEEEEEESCTTCHHH-HHHHHH-TTTSCEEEEEEESSCCC-----------C--CTTCEEEECCTTTTSSCCC----
T ss_pred CCCCCEEEEeCCCCCHHH-HHHHHH-cCCCCceEEEEeCCccC-----------C--CCCceEEEccccchhhhhhcccc
Confidence 467889999999986655 556663 45 6999999999832 2 157999999997754
Q ss_pred -----------------hcCCCcceeehhhhccC---ChhHH-------HHHHHHHHhhccCCcEEEEeecCcc--eeee
Q 042119 198 -----------------EQLGEYDCIFLAALVGM---SKEEK-------LTILGHIRKYMKDGGILLVRSAKGA--RAFL 248 (286)
Q Consensus 198 -----------------~~l~~fD~V~~aalvg~---~~~~k-------~~vl~~l~~~l~pgg~lv~r~~~g~--r~~l 248 (286)
.+...||+|+......+ +..+. ..++..+.+.|+|||.+++....+- ..+.
T Consensus 85 ~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~l~ 164 (201)
T 2plw_A 85 YIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLGSQTNNLK 164 (201)
T ss_dssp -------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTTHHHHH
T ss_pred ccccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCCCCHHHHH
Confidence 23347999996532211 11121 2488999999999999998643220 0000
Q ss_pred cccCCcccc-cCcEEEEEecCccccee---eeEEEeec
Q 042119 249 YPVVVEHDL-LDFEVLSAVHPNDDVIN---SVVLVRNS 282 (286)
Q Consensus 249 yp~v~~~~l-~gf~~~~~~~P~~~vin---svi~~r~~ 282 (286)
..+ ..|..+....|...-.. -++++++.
T Consensus 165 ------~~l~~~f~~v~~~~~~~~r~~s~e~y~v~~~~ 196 (201)
T 2plw_A 165 ------TYLKGMFQLVHTTKPKASRNESREIYLVCKNF 196 (201)
T ss_dssp ------HHHHTTEEEEEECCCC-----CCEEEEEEEEE
T ss_pred ------HHHHHHHheEEEECCcccCCcCceEEEEEecC
Confidence 011 24766666666543222 25666554
No 231
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.09 E-value=2.3e-10 Score=108.19 Aligned_cols=106 Identities=15% Similarity=0.100 Sum_probs=84.4
Q ss_pred CCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhc----CCCcce
Q 042119 130 QPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQ----LGEYDC 205 (286)
Q Consensus 130 ~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~----l~~fD~ 205 (286)
++++|||+|||+ |.-++.+|+ .+.+|+++|+|+++++.|+++++..| +. +++|+++|+.+.... -..||+
T Consensus 209 ~~~~VLDlg~G~-G~~~~~la~---~~~~v~~vD~s~~~~~~a~~n~~~n~-~~-~~~~~~~d~~~~~~~~~~~~~~fD~ 282 (382)
T 1wxx_A 209 RGERALDVFSYA-GGFALHLAL---GFREVVAVDSSAEALRRAEENARLNG-LG-NVRVLEANAFDLLRRLEKEGERFDL 282 (382)
T ss_dssp CEEEEEEETCTT-THHHHHHHH---HEEEEEEEESCHHHHHHHHHHHHHTT-CT-TEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred CCCeEEEeeecc-CHHHHHHHH---hCCEEEEEECCHHHHHHHHHHHHHcC-CC-CceEEECCHHHHHHHHHhcCCCeeE
Confidence 678999999997 555677887 27899999999999999999999999 44 499999999886543 247999
Q ss_pred eehhhhc-cCC-------hhHHHHHHHHHHhhccCCcEEEEeec
Q 042119 206 IFLAALV-GMS-------KEEKLTILGHIRKYMKDGGILLVRSA 241 (286)
Q Consensus 206 V~~aalv-g~~-------~~~k~~vl~~l~~~l~pgg~lv~r~~ 241 (286)
|+++.-- +.+ .....+++..+.+.|+|||.+++.+.
T Consensus 283 Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 326 (382)
T 1wxx_A 283 VVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASC 326 (382)
T ss_dssp EEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred EEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 9975311 111 13456799999999999999998763
No 232
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.08 E-value=2e-10 Score=107.78 Aligned_cols=99 Identities=16% Similarity=0.233 Sum_probs=78.6
Q ss_pred CCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceee
Q 042119 128 VVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIF 207 (286)
Q Consensus 128 ~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~ 207 (286)
..++.+|||||||+ |..+..+++ ..++.+++++|+ |++++.|++. .+++|+.+|..+ + +..||+|+
T Consensus 207 ~~~~~~vLDvG~G~-G~~~~~l~~-~~~~~~~~~~D~-~~~~~~a~~~--------~~v~~~~~d~~~-~--~~~~D~v~ 272 (372)
T 1fp1_D 207 FEGISTLVDVGGGS-GRNLELIIS-KYPLIKGINFDL-PQVIENAPPL--------SGIEHVGGDMFA-S--VPQGDAMI 272 (372)
T ss_dssp TTTCSEEEEETCTT-SHHHHHHHH-HCTTCEEEEEEC-HHHHTTCCCC--------TTEEEEECCTTT-C--CCCEEEEE
T ss_pred cCCCCEEEEeCCCC-cHHHHHHHH-HCCCCeEEEeCh-HHHHHhhhhc--------CCCEEEeCCccc-C--CCCCCEEE
Confidence 46779999999997 556677777 478999999999 9999887652 469999999866 3 33499999
Q ss_pred hhhhc-cCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 208 LAALV-GMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 208 ~aalv-g~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
....+ .++.+...++++++++.|+|||.+++.+
T Consensus 273 ~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e 306 (372)
T 1fp1_D 273 LKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVE 306 (372)
T ss_dssp EESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EecccccCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 76544 4555555699999999999999998874
No 233
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.08 E-value=1.9e-10 Score=96.42 Aligned_cols=94 Identities=11% Similarity=0.081 Sum_probs=70.7
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeeh
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFL 208 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~ 208 (286)
.++.+|||||||+ |..++.+++ .+ +|+|+|+|+++++. . .+++|+++|+.+. ...+.||+|+.
T Consensus 22 ~~~~~vLD~GcG~-G~~~~~l~~---~~-~v~gvD~s~~~~~~--------~---~~~~~~~~d~~~~-~~~~~fD~i~~ 84 (170)
T 3q87_B 22 LEMKIVLDLGTST-GVITEQLRK---RN-TVVSTDLNIRALES--------H---RGGNLVRADLLCS-INQESVDVVVF 84 (170)
T ss_dssp CCSCEEEEETCTT-CHHHHHHTT---TS-EEEEEESCHHHHHT--------C---SSSCEEECSTTTT-BCGGGCSEEEE
T ss_pred CCCCeEEEeccCc-cHHHHHHHh---cC-cEEEEECCHHHHhc--------c---cCCeEEECChhhh-cccCCCCEEEE
Confidence 4677999999996 667778887 44 99999999999987 2 4789999999773 32367999986
Q ss_pred hhhccC-Ch-------hHHHHHHHHHHhhccCCcEEEEee
Q 042119 209 AALVGM-SK-------EEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 209 aalvg~-~~-------~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
...... +. ++..+++.++.+.+ |||.+++..
T Consensus 85 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~ 123 (170)
T 3q87_B 85 NPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLV 123 (170)
T ss_dssp CCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEE
T ss_pred CCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEE
Confidence 532211 10 12356888999988 999998865
No 234
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.07 E-value=2.4e-10 Score=106.32 Aligned_cols=99 Identities=14% Similarity=0.248 Sum_probs=78.7
Q ss_pred CCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceee
Q 042119 128 VVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIF 207 (286)
Q Consensus 128 ~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~ 207 (286)
..++.+|||||||+ |..+..+++ .+|+.+++++|+ |++++.|++. .+++|+.+|..+ + +.+||+|+
T Consensus 186 ~~~~~~vlDvG~G~-G~~~~~l~~-~~p~~~~~~~D~-~~~~~~a~~~--------~~v~~~~~d~~~-~--~p~~D~v~ 251 (352)
T 1fp2_A 186 FDGLESIVDVGGGT-GTTAKIICE-TFPKLKCIVFDR-PQVVENLSGS--------NNLTYVGGDMFT-S--IPNADAVL 251 (352)
T ss_dssp HTTCSEEEEETCTT-SHHHHHHHH-HCTTCEEEEEEC-HHHHTTCCCB--------TTEEEEECCTTT-C--CCCCSEEE
T ss_pred cccCceEEEeCCCc-cHHHHHHHH-HCCCCeEEEeeC-HHHHhhcccC--------CCcEEEeccccC-C--CCCccEEE
Confidence 45678999999997 566677777 478999999999 9999888751 359999999865 2 33599998
Q ss_pred hhhhc-cCChhHHHHHHHHHHhhccC---CcEEEEee
Q 042119 208 LAALV-GMSKEEKLTILGHIRKYMKD---GGILLVRS 240 (286)
Q Consensus 208 ~aalv-g~~~~~k~~vl~~l~~~l~p---gg~lv~r~ 240 (286)
....+ .++.++..++++++++.|+| ||++++.+
T Consensus 252 ~~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e 288 (352)
T 1fp2_A 252 LKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIID 288 (352)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEE
T ss_pred eehhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 76544 45555666999999999999 99998865
No 235
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.06 E-value=3.2e-10 Score=97.41 Aligned_cols=120 Identities=16% Similarity=0.164 Sum_probs=83.5
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeeh
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFL 208 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~ 208 (286)
.++.+|||||||++. .+..+ +.+|+++|+|+. +++++++|+.+++...+.||+|+.
T Consensus 66 ~~~~~vLDiG~G~G~-~~~~l------~~~v~~~D~s~~-----------------~~~~~~~d~~~~~~~~~~fD~v~~ 121 (215)
T 2zfu_A 66 PASLVVADFGCGDCR-LASSI------RNPVHCFDLASL-----------------DPRVTVCDMAQVPLEDESVDVAVF 121 (215)
T ss_dssp CTTSCEEEETCTTCH-HHHHC------CSCEEEEESSCS-----------------STTEEESCTTSCSCCTTCEEEEEE
T ss_pred CCCCeEEEECCcCCH-HHHHh------hccEEEEeCCCC-----------------CceEEEeccccCCCCCCCEeEEEE
Confidence 567899999999754 33333 378999999988 357889999886655567999987
Q ss_pred hhhccCChhHHHHHHHHHHhhccCCcEEEEeecCcceeeecccCCcccc------cCcEEEEEecCcccceeeeEEEeec
Q 042119 209 AALVGMSKEEKLTILGHIRKYMKDGGILLVRSAKGARAFLYPVVVEHDL------LDFEVLSAVHPNDDVINSVVLVRNS 282 (286)
Q Consensus 209 aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~~~g~r~~lyp~v~~~~l------~gf~~~~~~~P~~~vinsvi~~r~~ 282 (286)
...+.. ++...+++++.+.|+|||.+++.+... . ++ .+.++ .||++.......+ ...++++||.
T Consensus 122 ~~~l~~--~~~~~~l~~~~~~L~~gG~l~i~~~~~--~--~~--~~~~~~~~l~~~Gf~~~~~~~~~~--~~~~~~~~k~ 191 (215)
T 2zfu_A 122 CLSLMG--TNIRDFLEEANRVLKPGGLLKVAEVSS--R--FE--DVRTFLRAVTKLGFKIVSKDLTNS--HFFLFDFQKT 191 (215)
T ss_dssp ESCCCS--SCHHHHHHHHHHHEEEEEEEEEEECGG--G--CS--CHHHHHHHHHHTTEEEEEEECCST--TCEEEEEEEC
T ss_pred ehhccc--cCHHHHHHHHHHhCCCCeEEEEEEcCC--C--CC--CHHHHHHHHHHCCCEEEEEecCCC--eEEEEEEEec
Confidence 554432 567789999999999999999976332 0 11 22211 5898876543322 2256777774
No 236
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.06 E-value=3.3e-10 Score=107.05 Aligned_cols=110 Identities=18% Similarity=0.215 Sum_probs=80.7
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcC--CCC----CCeEEEEccccchhhc---
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDA--EFE----GRMKFLTRDIMEVKEQ--- 199 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g--~l~----~~i~f~~~D~~~~~~~--- 199 (286)
..|++||+||||. |.++..++++ +..+|+.||+|+++++.|++.+...+ .+. ++++++++|+.+....
T Consensus 187 p~pkrVL~IGgG~-G~~arellk~--~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~ 263 (364)
T 2qfm_A 187 YTGKDVLILGGGD-GGILCEIVKL--KPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAK 263 (364)
T ss_dssp CTTCEEEEEECTT-CHHHHHHHTT--CCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHH
T ss_pred CCCCEEEEEECCh-hHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhc
Confidence 3679999999996 5666666662 34899999999999999999965332 122 2799999999987653
Q ss_pred -CCCcceeehhhhc---cCChh--HHHHHHHHH----HhhccCCcEEEEeec
Q 042119 200 -LGEYDCIFLAALV---GMSKE--EKLTILGHI----RKYMKDGGILLVRSA 241 (286)
Q Consensus 200 -l~~fD~V~~aalv---g~~~~--~k~~vl~~l----~~~l~pgg~lv~r~~ 241 (286)
-+.||+|+++..- +..+. -..++++.+ .++|+|||++++.+.
T Consensus 264 ~~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~ 315 (364)
T 2qfm_A 264 EGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGN 315 (364)
T ss_dssp HTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred cCCCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcC
Confidence 3579999998642 21111 124566666 999999999999864
No 237
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.04 E-value=1.3e-09 Score=104.90 Aligned_cols=99 Identities=23% Similarity=0.290 Sum_probs=78.1
Q ss_pred CCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceee
Q 042119 128 VVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIF 207 (286)
Q Consensus 128 ~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~ 207 (286)
..++.+|||+|||+ |.-++.+|+ .+.+|+|+|+|++|++.|+++++..| + + ++|+++|+.+.... .||+|+
T Consensus 288 ~~~~~~VLDlgcG~-G~~sl~la~---~~~~V~gvD~s~~ai~~A~~n~~~ng-l-~-v~~~~~d~~~~~~~--~fD~Vv 358 (425)
T 2jjq_A 288 LVEGEKILDMYSGV-GTFGIYLAK---RGFNVKGFDSNEFAIEMARRNVEINN-V-D-AEFEVASDREVSVK--GFDTVI 358 (425)
T ss_dssp HCCSSEEEEETCTT-THHHHHHHH---TTCEEEEEESCHHHHHHHHHHHHHHT-C-C-EEEEECCTTTCCCT--TCSEEE
T ss_pred cCCCCEEEEeeccc-hHHHHHHHH---cCCEEEEEECCHHHHHHHHHHHHHcC-C-c-EEEEECChHHcCcc--CCCEEE
Confidence 46788999999996 555677888 47899999999999999999999888 4 3 99999999876543 799999
Q ss_pred hhhhc-cCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 208 LAALV-GMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 208 ~aalv-g~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
++--- |+ ...+++.+. .++|||++.+..
T Consensus 359 ~dPPr~g~----~~~~~~~l~-~l~p~givyvsc 387 (425)
T 2jjq_A 359 VDPPRAGL----HPRLVKRLN-REKPGVIVYVSC 387 (425)
T ss_dssp ECCCTTCS----CHHHHHHHH-HHCCSEEEEEES
T ss_pred EcCCccch----HHHHHHHHH-hcCCCcEEEEEC
Confidence 76321 21 124666665 489999988863
No 238
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.04 E-value=3.7e-11 Score=106.59 Aligned_cols=103 Identities=14% Similarity=0.093 Sum_probs=65.3
Q ss_pred HHhcCC-CCCCEEEEeccCCChhhHHHHHhhcCCC-cEEEEEeCChHHHHHHHHHHHhcCCCC--CCeEEEE-ccccchh
Q 042119 123 LSENGV-VQPKKVAFVGSGPMPLTSIIMAKHHLTS-THFDNFDIDEAANDVARSIVASDAEFE--GRMKFLT-RDIMEVK 197 (286)
Q Consensus 123 l~~~~~-~~~~~VL~IG~G~lp~tai~lA~~~~~g-~~V~~iDid~~ai~~Ar~~~~~~g~l~--~~i~f~~-~D~~~~~ 197 (286)
+..+.+ ..+++|||||||++. .+..+++ .| .+|+|+|+|++|++.|++...+.+ .. .++++.. +|.....
T Consensus 29 L~~~~~~~~g~~VLDiGcGtG~-~t~~la~---~g~~~V~gvDis~~ml~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 103 (232)
T 3opn_A 29 LKEFHLEINGKTCLDIGSSTGG-FTDVMLQ---NGAKLVYALDVGTNQLAWKIRSDERVV-VMEQFNFRNAVLADFEQGR 103 (232)
T ss_dssp HHHTTCCCTTCEEEEETCTTSH-HHHHHHH---TTCSEEEEECSSCCCCCHHHHTCTTEE-EECSCCGGGCCGGGCCSCC
T ss_pred HHHcCCCCCCCEEEEEccCCCH-HHHHHHh---cCCCEEEEEcCCHHHHHHHHHhCcccc-ccccceEEEeCHhHcCcCC
Confidence 334444 456799999999754 5567777 35 499999999999999887533221 11 1233333 2211101
Q ss_pred hcCCCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEe
Q 042119 198 EQLGEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVR 239 (286)
Q Consensus 198 ~~l~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r 239 (286)
.+...||++|.. + ..++.++.+.|||||.+++-
T Consensus 104 ~d~~~~D~v~~~-l--------~~~l~~i~rvLkpgG~lv~~ 136 (232)
T 3opn_A 104 PSFTSIDVSFIS-L--------DLILPPLYEILEKNGEVAAL 136 (232)
T ss_dssp CSEEEECCSSSC-G--------GGTHHHHHHHSCTTCEEEEE
T ss_pred CCEEEEEEEhhh-H--------HHHHHHHHHhccCCCEEEEE
Confidence 122245665533 1 46999999999999998875
No 239
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=99.03 E-value=6.8e-10 Score=102.17 Aligned_cols=111 Identities=16% Similarity=0.296 Sum_probs=85.5
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhc--CCC-CCCeEEEEccccchhhcC-CCcc
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASD--AEF-EGRMKFLTRDIMEVKEQL-GEYD 204 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~--g~l-~~~i~f~~~D~~~~~~~l-~~fD 204 (286)
..|++||.||.|. |.++-.+.+ +.+..+|+.+||||+.++.|++.+... |.+ ..|++++.+|+.+....- +.||
T Consensus 82 p~pk~VLIiGgGd-G~~~revlk-~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yD 159 (294)
T 3o4f_A 82 GHAKHVLIIGGGD-GAMLREVTR-HKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFD 159 (294)
T ss_dssp SCCCEEEEESCTT-SHHHHHHHT-CTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEE
T ss_pred CCCCeEEEECCCc-hHHHHHHHH-cCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCC
Confidence 6789999999995 667777777 466789999999999999999987432 211 379999999998876544 3699
Q ss_pred eeehhhhccCChhH---HHHHHHHHHhhccCCcEEEEeec
Q 042119 205 CIFLAALVGMSKEE---KLTILGHIRKYMKDGGILLVRSA 241 (286)
Q Consensus 205 ~V~~aalvg~~~~~---k~~vl~~l~~~l~pgg~lv~r~~ 241 (286)
+|+++..=...... -.++++.+.+.|+|||++++..+
T Consensus 160 vIi~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~ 199 (294)
T 3o4f_A 160 VIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNG 199 (294)
T ss_dssp EEEESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEEE
T ss_pred EEEEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEecC
Confidence 99988652111111 24689999999999999999763
No 240
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.03 E-value=4.4e-10 Score=106.73 Aligned_cols=102 Identities=21% Similarity=0.160 Sum_probs=82.1
Q ss_pred CCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhc---------------CCCCCCeEEEEcccc
Q 042119 130 QPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASD---------------AEFEGRMKFLTRDIM 194 (286)
Q Consensus 130 ~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~---------------g~l~~~i~f~~~D~~ 194 (286)
++.+|||+|||++ .-++.+|++ .++.+|+++|+|+++++.++++++.. | +.+ ++++++|+.
T Consensus 47 ~~~~VLDl~aGtG-~~~l~~a~~-~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~g-l~~-i~v~~~Da~ 122 (378)
T 2dul_A 47 NPKIVLDALSATG-IRGIRFALE-TPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKG-EKT-IVINHDDAN 122 (378)
T ss_dssp CCSEEEESSCTTS-HHHHHHHHH-SSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEES-SSE-EEEEESCHH
T ss_pred CCCEEEECCCchh-HHHHHHHHh-CCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccC-CCc-eEEEcCcHH
Confidence 6889999999975 555677763 46678999999999999999999998 7 543 999999998
Q ss_pred chhhcC-CCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 195 EVKEQL-GEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 195 ~~~~~l-~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
++.... ..||+|+++.. + ...++++...+.++|||++.+..
T Consensus 123 ~~~~~~~~~fD~I~lDP~-~----~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 123 RLMAERHRYFHFIDLDPF-G----SPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HHHHHSTTCEEEEEECCS-S----CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHhccCCCCEEEeCCC-C----CHHHHHHHHHHhcCCCCEEEEEe
Confidence 876544 36999997643 2 22478999999999999887753
No 241
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.02 E-value=2.4e-09 Score=99.07 Aligned_cols=110 Identities=19% Similarity=0.153 Sum_probs=81.4
Q ss_pred CCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcC---CCc
Q 042119 127 GVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQL---GEY 203 (286)
Q Consensus 127 ~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l---~~f 203 (286)
.+.++.+|||+||||++.|.. +|+....+++|+++|+|+.+++.+++++++.| + .+++++++|+.++.... ..|
T Consensus 99 ~~~~g~~VLDlcaG~G~kt~~-la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g-~-~~v~~~~~D~~~~~~~~~~~~~f 175 (309)
T 2b9e_A 99 DPPPGSHVIDACAAPGNKTSH-LAALLKNQGKIFAFDLDAKRLASMATLLARAG-V-SCCELAEEDFLAVSPSDPRYHEV 175 (309)
T ss_dssp CCCTTCEEEESSCTTCHHHHH-HHHHHTTCSEEEEEESCHHHHHHHHHHHHHTT-C-CSEEEEECCGGGSCTTCGGGTTE
T ss_pred CCCCCCEEEEeCCChhHHHHH-HHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC-C-CeEEEEeCChHhcCccccccCCC
Confidence 467889999999999777654 55523356899999999999999999999999 4 67999999998765432 469
Q ss_pred ceeehhhh---ccC---ChhH-----------------HHHHHHHHHhhccCCcEEEEee
Q 042119 204 DCIFLAAL---VGM---SKEE-----------------KLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 204 D~V~~aal---vg~---~~~~-----------------k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
|.|++++- .|+ .++. ..++|++..+.++ ||+|++.+
T Consensus 176 D~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsT 234 (309)
T 2b9e_A 176 HYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYST 234 (309)
T ss_dssp EEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEE
T ss_pred CEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEEC
Confidence 99997531 121 0010 1257888888776 99999864
No 242
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.02 E-value=1.2e-09 Score=100.21 Aligned_cols=76 Identities=11% Similarity=0.177 Sum_probs=59.2
Q ss_pred cCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcce
Q 042119 126 NGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDC 205 (286)
Q Consensus 126 ~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~ 205 (286)
..+.++.+|||||||++. .+..+++ .+.+|+|+|+|+.+++.|++.+...| + ++++++++|+.+.+ +..||+
T Consensus 38 ~~~~~~~~VLDiG~G~G~-lt~~La~---~~~~v~~vDi~~~~~~~a~~~~~~~~-~-~~v~~~~~D~~~~~--~~~~D~ 109 (299)
T 2h1r_A 38 AKIKSSDIVLEIGCGTGN-LTVKLLP---LAKKVITIDIDSRMISEVKKRCLYEG-Y-NNLEVYEGDAIKTV--FPKFDV 109 (299)
T ss_dssp HCCCTTCEEEEECCTTST-THHHHTT---TSSEEEEECSCHHHHHHHHHHHHHTT-C-CCEEC----CCSSC--CCCCSE
T ss_pred cCCCCcCEEEEEcCcCcH-HHHHHHh---cCCEEEEEECCHHHHHHHHHHHHHcC-C-CceEEEECchhhCC--cccCCE
Confidence 356788999999999754 5567777 47899999999999999999998877 3 68999999997754 358999
Q ss_pred eehh
Q 042119 206 IFLA 209 (286)
Q Consensus 206 V~~a 209 (286)
|+..
T Consensus 110 Vv~n 113 (299)
T 2h1r_A 110 CTAN 113 (299)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 9864
No 243
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.01 E-value=1.7e-10 Score=96.40 Aligned_cols=92 Identities=16% Similarity=0.277 Sum_probs=72.3
Q ss_pred hcCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhh---cCC
Q 042119 125 ENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKE---QLG 201 (286)
Q Consensus 125 ~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~---~l~ 201 (286)
..+.+++.+||+||||. +++|+|++|++.|++.. + .+++|+++|+.+++. ..+
T Consensus 7 ~~g~~~g~~vL~~~~g~------------------v~vD~s~~ml~~a~~~~---~---~~~~~~~~d~~~~~~~~~~~~ 62 (176)
T 2ld4_A 7 DFGISAGQFVAVVWDKS------------------SPVEALKGLVDKLQALT---G---NEGRVSVENIKQLLQSAHKES 62 (176)
T ss_dssp TTTCCTTSEEEEEECTT------------------SCHHHHHHHHHHHHHHT---T---TTSEEEEEEGGGGGGGCCCSS
T ss_pred ccCCCCCCEEEEecCCc------------------eeeeCCHHHHHHHHHhc---c---cCcEEEEechhcCccccCCCC
Confidence 44678999999999994 12799999999999873 2 358999999988776 456
Q ss_pred CcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 202 EYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 202 ~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
.||+|+.....++-.++..++++++++.|||||.+++..
T Consensus 63 ~fD~V~~~~~l~~~~~~~~~~l~~~~r~LkpgG~l~~~~ 101 (176)
T 2ld4_A 63 SFDIILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKE 101 (176)
T ss_dssp CEEEEEECCSTTCCCCCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred CEeEEEECChhhhcccCHHHHHHHHHHHCCCCEEEEEEc
Confidence 799999644333221456789999999999999999964
No 244
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.01 E-value=1.9e-09 Score=91.75 Aligned_cols=99 Identities=20% Similarity=0.283 Sum_probs=72.1
Q ss_pred CCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCccee
Q 042119 127 GVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCI 206 (286)
Q Consensus 127 ~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V 206 (286)
...++.+|||+|||+ |..++.+++ ....+|+|+|+|+++++.|++.+. +++|+++|+.+++ +.||+|
T Consensus 48 ~~~~~~~vlD~gcG~-G~~~~~l~~--~~~~~v~~vD~~~~~~~~a~~~~~-------~~~~~~~d~~~~~---~~~D~v 114 (200)
T 1ne2_A 48 GNIGGRSVIDAGTGN-GILACGSYL--LGAESVTAFDIDPDAIETAKRNCG-------GVNFMVADVSEIS---GKYDTW 114 (200)
T ss_dssp TSSBTSEEEEETCTT-CHHHHHHHH--TTBSEEEEEESCHHHHHHHHHHCT-------TSEEEECCGGGCC---CCEEEE
T ss_pred CCCCCCEEEEEeCCc-cHHHHHHHH--cCCCEEEEEECCHHHHHHHHHhcC-------CCEEEECcHHHCC---CCeeEE
Confidence 456789999999996 556677887 234479999999999999999743 6899999998754 579999
Q ss_pred ehhhhccC-ChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 207 FLAALVGM-SKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 207 ~~aalvg~-~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
+.....+. ......++++.+.+.+ |+++++.+
T Consensus 115 ~~~~p~~~~~~~~~~~~l~~~~~~~--g~~~~~~~ 147 (200)
T 1ne2_A 115 IMNPPFGSVVKHSDRAFIDKAFETS--MWIYSIGN 147 (200)
T ss_dssp EECCCC-------CHHHHHHHHHHE--EEEEEEEE
T ss_pred EECCCchhccCchhHHHHHHHHHhc--CcEEEEEc
Confidence 97643211 1122346899999988 66555544
No 245
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.00 E-value=5.9e-10 Score=106.47 Aligned_cols=104 Identities=17% Similarity=0.134 Sum_probs=83.7
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCC-cEEEEEeCChHHHHHHHHHHHhcCCCCCC-eEEEEccccchhh-cC-CCcc
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTS-THFDNFDIDEAANDVARSIVASDAEFEGR-MKFLTRDIMEVKE-QL-GEYD 204 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g-~~V~~iDid~~ai~~Ar~~~~~~g~l~~~-i~f~~~D~~~~~~-~l-~~fD 204 (286)
.++.+|||++||+++++ +.+|++ ..| .+|+++|+|+++++.++++++..| ++++ ++++++|+.++.. .+ +.||
T Consensus 51 ~~g~~VLDlfaGtG~~s-l~aa~~-~~ga~~V~avDi~~~av~~~~~N~~~Ng-l~~~~v~v~~~Da~~~l~~~~~~~fD 127 (392)
T 3axs_A 51 GRPVKVADPLSASGIRA-IRFLLE-TSCVEKAYANDISSKAIEIMKENFKLNN-IPEDRYEIHGMEANFFLRKEWGFGFD 127 (392)
T ss_dssp CSCEEEEESSCTTSHHH-HHHHHH-CSCEEEEEEECSCHHHHHHHHHHHHHTT-CCGGGEEEECSCHHHHHHSCCSSCEE
T ss_pred CCCCEEEECCCcccHHH-HHHHHh-CCCCCEEEEEECCHHHHHHHHHHHHHhC-CCCceEEEEeCCHHHHHHHhhCCCCc
Confidence 35789999999986665 555552 345 689999999999999999999999 6766 9999999988765 54 3699
Q ss_pred eeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 205 CIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 205 ~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
+|+++.. +. ..++++...+.++|||+|.+..
T Consensus 128 ~V~lDP~-g~----~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 128 YVDLDPF-GT----PVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp EEEECCS-SC----CHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEECCC-cC----HHHHHHHHHHHhCCCCEEEEEe
Confidence 9998862 21 1358999999999999887754
No 246
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.99 E-value=1.6e-09 Score=93.01 Aligned_cols=133 Identities=17% Similarity=0.282 Sum_probs=85.4
Q ss_pred CCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhc------C-
Q 042119 128 VVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQ------L- 200 (286)
Q Consensus 128 ~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~------l- 200 (286)
..++.+|||+||||++.| ..+|+ .+++|+|+|+++.+ . ..+++|+++|+.+.... +
T Consensus 23 ~~~g~~VLDlG~G~G~~s-~~la~---~~~~V~gvD~~~~~-----------~--~~~v~~~~~D~~~~~~~~~~~~~~~ 85 (191)
T 3dou_A 23 VRKGDAVIEIGSSPGGWT-QVLNS---LARKIISIDLQEME-----------E--IAGVRFIRCDIFKETIFDDIDRALR 85 (191)
T ss_dssp SCTTCEEEEESCTTCHHH-HHHTT---TCSEEEEEESSCCC-----------C--CTTCEEEECCTTSSSHHHHHHHHHH
T ss_pred CCCCCEEEEEeecCCHHH-HHHHH---cCCcEEEEeccccc-----------c--CCCeEEEEccccCHHHHHHHHHHhh
Confidence 367899999999997665 56777 38999999999852 2 15799999999764310 1
Q ss_pred ----CCcceeehhhhc---cCCh-------hHHHHHHHHHHhhccCCcEEEEeecCcceeeecccCCcccc-cCcEEEEE
Q 042119 201 ----GEYDCIFLAALV---GMSK-------EEKLTILGHIRKYMKDGGILLVRSAKGARAFLYPVVVEHDL-LDFEVLSA 265 (286)
Q Consensus 201 ----~~fD~V~~aalv---g~~~-------~~k~~vl~~l~~~l~pgg~lv~r~~~g~r~~lyp~v~~~~l-~gf~~~~~ 265 (286)
+.||+|+.+... |... +....+++...+.|||||.+++....|-.. +.+- ..+ ..|+.+..
T Consensus 86 ~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~~---~~~~-~~l~~~F~~v~~ 161 (191)
T 3dou_A 86 EEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDMT---NDFI-AIWRKNFSSYKI 161 (191)
T ss_dssp HHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTHH---HHHH-HHHGGGEEEEEE
T ss_pred cccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCCH---HHHH-HHHHHhcCEEEE
Confidence 379999865311 1111 123568889999999999999876433211 1000 012 35888888
Q ss_pred ecCcccc-eee--eEEEee
Q 042119 266 VHPNDDV-INS--VVLVRN 281 (286)
Q Consensus 266 ~~P~~~v-ins--vi~~r~ 281 (286)
..|...= -++ ++|++.
T Consensus 162 ~kP~asR~~s~E~y~v~~~ 180 (191)
T 3dou_A 162 SKPPASRGSSSEIYIMFFG 180 (191)
T ss_dssp ECC------CCEEEEEEEE
T ss_pred ECCCCccCCCceEEEEEee
Confidence 8886542 232 666665
No 247
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.97 E-value=6.3e-10 Score=102.28 Aligned_cols=104 Identities=14% Similarity=0.089 Sum_probs=69.2
Q ss_pred HHHhcCC-CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeE-EEEccccchhh-
Q 042119 122 ILSENGV-VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMK-FLTRDIMEVKE- 198 (286)
Q Consensus 122 ~l~~~~~-~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~-f~~~D~~~~~~- 198 (286)
++..+.+ .++++|||||||++++| .++++ ....+|+|+|++++|++++.+. . .++. +...|+..+..
T Consensus 76 ~l~~~~~~~~g~~vLDiGcGTG~~t-~~L~~--~ga~~V~aVDvs~~mL~~a~r~---~----~rv~~~~~~ni~~l~~~ 145 (291)
T 3hp7_A 76 ALAVFNLSVEDMITIDIGASTGGFT-DVMLQ--NGAKLVYAVDVGTNQLVWKLRQ---D----DRVRSMEQYNFRYAEPV 145 (291)
T ss_dssp HHHHTTCCCTTCEEEEETCTTSHHH-HHHHH--TTCSEEEEECSSSSCSCHHHHT---C----TTEEEECSCCGGGCCGG
T ss_pred HHHhcCCCccccEEEecCCCccHHH-HHHHh--CCCCEEEEEECCHHHHHHHHHh---C----cccceecccCceecchh
Confidence 3445555 46789999999997776 45665 1446999999999999986542 1 2332 22344443322
Q ss_pred cC--CCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEe
Q 042119 199 QL--GEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVR 239 (286)
Q Consensus 199 ~l--~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r 239 (286)
++ ..||+|+.+.... .-..+|.++++.|+|||.+++-
T Consensus 146 ~l~~~~fD~v~~d~sf~----sl~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 146 DFTEGLPSFASIDVSFI----SLNLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp GCTTCCCSEEEECCSSS----CGGGTHHHHHHHSCTTCEEEEE
T ss_pred hCCCCCCCEEEEEeeHh----hHHHHHHHHHHHcCcCCEEEEE
Confidence 11 2499887653221 2256999999999999998875
No 248
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.96 E-value=2e-09 Score=98.87 Aligned_cols=135 Identities=18% Similarity=0.198 Sum_probs=83.9
Q ss_pred CCCCCCEEEEeccCC----ChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEE-EEccccchhhcCC
Q 042119 127 GVVQPKKVAFVGSGP----MPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKF-LTRDIMEVKEQLG 201 (286)
Q Consensus 127 ~~~~~~~VL~IG~G~----lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f-~~~D~~~~~~~l~ 201 (286)
.+.++.+|||+|||. +|-+ ..+++...++++|+|+|+++. . .+++| +++|+.+.+.+ +
T Consensus 60 ~l~~g~~VLDLGcGsg~~~GpGs-~~~a~~~~~~~~V~gvDis~~-----------v----~~v~~~i~gD~~~~~~~-~ 122 (290)
T 2xyq_A 60 AVPYNMRVIHFGAGSDKGVAPGT-AVLRQWLPTGTLLVDSDLNDF-----------V----SDADSTLIGDCATVHTA-N 122 (290)
T ss_dssp CCCTTCEEEEESCCCTTSBCHHH-HHHHHHSCTTCEEEEEESSCC-----------B----CSSSEEEESCGGGCCCS-S
T ss_pred CCCCCCEEEEeCCCCCCCCCcHH-HHHHHHcCCCCEEEEEECCCC-----------C----CCCEEEEECccccCCcc-C
Confidence 457889999999943 2333 445653333799999999998 1 25789 99999875533 5
Q ss_pred CcceeehhhhccC----------ChhHHHHHHHHHHhhccCCcEEEEeecCcce-eeecccCCcccccCcEEEEEecCcc
Q 042119 202 EYDCIFLAALVGM----------SKEEKLTILGHIRKYMKDGGILLVRSAKGAR-AFLYPVVVEHDLLDFEVLSAVHPND 270 (286)
Q Consensus 202 ~fD~V~~aalvg~----------~~~~k~~vl~~l~~~l~pgg~lv~r~~~g~r-~~lyp~v~~~~l~gf~~~~~~~P~~ 270 (286)
.||+|+....... ..+...++++++.+.|||||.+++....+-. .-+.... .-.||..+...++..
T Consensus 123 ~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~~~~l~~~l---~~~GF~~v~~~asr~ 199 (290)
T 2xyq_A 123 KWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWNADLYKLM---GHFSWWTAFVTNVNA 199 (290)
T ss_dssp CEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCCHHHHHHH---TTEEEEEEEEEGGGT
T ss_pred cccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccCCHHHHHHHH---HHcCCcEEEEEEcCC
Confidence 7999996421110 0122347999999999999999986532211 0000000 113676655555444
Q ss_pred cceeeeEEEee
Q 042119 271 DVINSVVLVRN 281 (286)
Q Consensus 271 ~vinsvi~~r~ 281 (286)
+--..++++|.
T Consensus 200 ~s~e~~lv~~~ 210 (290)
T 2xyq_A 200 SSSEAFLIGAN 210 (290)
T ss_dssp TSSCEEEEEEE
T ss_pred CchheEEecCC
Confidence 44455666665
No 249
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.95 E-value=1.6e-09 Score=91.40 Aligned_cols=99 Identities=17% Similarity=0.245 Sum_probs=70.4
Q ss_pred CCCCCEEEEeccCCChhhHHHHHhhcCCC---------cEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEE-Eccccchh
Q 042119 128 VVQPKKVAFVGSGPMPLTSIIMAKHHLTS---------THFDNFDIDEAANDVARSIVASDAEFEGRMKFL-TRDIMEVK 197 (286)
Q Consensus 128 ~~~~~~VL~IG~G~lp~tai~lA~~~~~g---------~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~-~~D~~~~~ 197 (286)
+.++.+|||||||+ |..++.++++ .+. ++|+++|+|+.+ + + .+++++ .+|+.+..
T Consensus 20 ~~~~~~vLDlGcG~-G~~~~~la~~-~~~~~~~~~~~~~~v~~vD~s~~~-----------~-~-~~~~~~~~~d~~~~~ 84 (196)
T 2nyu_A 20 LRPGLRVLDCGAAP-GAWSQVAVQK-VNAAGTDPSSPVGFVLGVDLLHIF-----------P-L-EGATFLCPADVTDPR 84 (196)
T ss_dssp CCTTCEEEEETCCS-CHHHHHHHHH-TTTTCCCTTSCCCEEEEECSSCCC-----------C-C-TTCEEECSCCTTSHH
T ss_pred CCCCCEEEEeCCCC-CHHHHHHHHH-hccccccccCCCceEEEEechhcc-----------c-C-CCCeEEEeccCCCHH
Confidence 46789999999998 5666777773 333 899999999842 2 1 468999 99986643
Q ss_pred h--------cCCCcceeehhhh---ccCChhHH-------HHHHHHHHhhccCCcEEEEeec
Q 042119 198 E--------QLGEYDCIFLAAL---VGMSKEEK-------LTILGHIRKYMKDGGILLVRSA 241 (286)
Q Consensus 198 ~--------~l~~fD~V~~aal---vg~~~~~k-------~~vl~~l~~~l~pgg~lv~r~~ 241 (286)
. +...||+|+.... .+....+. ..+++++.+.|+|||.+++...
T Consensus 85 ~~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 146 (196)
T 2nyu_A 85 TSQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTW 146 (196)
T ss_dssp HHHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred HHHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEec
Confidence 2 1137999995421 11111222 4789999999999999999764
No 250
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.95 E-value=1.4e-09 Score=99.54 Aligned_cols=108 Identities=12% Similarity=0.079 Sum_probs=88.7
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcC----CCcEEEEEeCCh--------------------------HHHHHHHHHHHh
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHL----TSTHFDNFDIDE--------------------------AANDVARSIVAS 178 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~----~g~~V~~iDid~--------------------------~ai~~Ar~~~~~ 178 (286)
..+.+|+++|+. .|.|+++||.... ++.+|+++|..+ ...+.+++++++
T Consensus 105 ~~pg~IlEiGv~-~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~ 183 (282)
T 2wk1_A 105 NVPGDLVETGVW-RGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRN 183 (282)
T ss_dssp TCCCEEEEECCT-TSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHH
T ss_pred CCCCcEEEeecC-chHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHH
Confidence 568899999998 6999999987321 488999999642 147789999999
Q ss_pred cCCC-CCCeEEEEccccchhhcC--CCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEeec
Q 042119 179 DAEF-EGRMKFLTRDIMEVKEQL--GEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRSA 241 (286)
Q Consensus 179 ~g~l-~~~i~f~~~D~~~~~~~l--~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~~ 241 (286)
.| + .++|+++.||+.+....+ +.||+||+++-. -+.....|+.+.++|+|||+|++.+.
T Consensus 184 ~g-l~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~---y~~~~~~Le~~~p~L~pGGiIv~DD~ 245 (282)
T 2wk1_A 184 YD-LLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDL---YESTWDTLTNLYPKVSVGGYVIVDDY 245 (282)
T ss_dssp TT-CCSTTEEEEESCHHHHSTTCCCCCEEEEEECCCS---HHHHHHHHHHHGGGEEEEEEEEESSC
T ss_pred cC-CCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCc---cccHHHHHHHHHhhcCCCEEEEEcCC
Confidence 99 6 489999999998866554 369999999743 24556899999999999999999985
No 251
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.95 E-value=1.5e-09 Score=101.14 Aligned_cols=98 Identities=14% Similarity=0.261 Sum_probs=77.0
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeeh
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFL 208 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~ 208 (286)
.++.+|||||||+ |..+..+++ .+|+.+++++|+ +.+++.|++ . .+++|+.+|..+ + +..||+|++
T Consensus 192 ~~~~~vlDvG~G~-G~~~~~l~~-~~p~~~~~~~D~-~~~~~~a~~----~----~~v~~~~~d~~~-~--~~~~D~v~~ 257 (358)
T 1zg3_A 192 EGLESLVDVGGGT-GGVTKLIHE-IFPHLKCTVFDQ-PQVVGNLTG----N----ENLNFVGGDMFK-S--IPSADAVLL 257 (358)
T ss_dssp HTCSEEEEETCTT-SHHHHHHHH-HCTTSEEEEEEC-HHHHSSCCC----C----SSEEEEECCTTT-C--CCCCSEEEE
T ss_pred cCCCEEEEECCCc-CHHHHHHHH-HCCCCeEEEecc-HHHHhhccc----C----CCcEEEeCccCC-C--CCCceEEEE
Confidence 4678999999997 566677777 478999999999 788877764 1 359999999866 3 346999997
Q ss_pred hhhc-cCChhHHHHHHHHHHhhccC---CcEEEEee
Q 042119 209 AALV-GMSKEEKLTILGHIRKYMKD---GGILLVRS 240 (286)
Q Consensus 209 aalv-g~~~~~k~~vl~~l~~~l~p---gg~lv~r~ 240 (286)
.... .++.+...++++++++.|+| ||++++.+
T Consensus 258 ~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e 293 (358)
T 1zg3_A 258 KWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIID 293 (358)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEE
T ss_pred cccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 6544 45555556999999999999 99988864
No 252
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.94 E-value=5.5e-09 Score=100.51 Aligned_cols=101 Identities=14% Similarity=0.135 Sum_probs=78.1
Q ss_pred CCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhh----cCCC
Q 042119 127 GVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKE----QLGE 202 (286)
Q Consensus 127 ~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~----~l~~ 202 (286)
...++.+|||+|||+ |.-++.+|+ .+.+|+|+|+|+++++.|+++++..| + .+++|+++|+.+... ..+.
T Consensus 283 ~~~~~~~VLDlgcG~-G~~~~~la~---~~~~V~gvD~s~~al~~A~~n~~~~~-~-~~v~f~~~d~~~~l~~~~~~~~~ 356 (433)
T 1uwv_A 283 DVQPEDRVLDLFCGM-GNFTLPLAT---QAASVVGVEGVPALVEKGQQNARLNG-L-QNVTFYHENLEEDVTKQPWAKNG 356 (433)
T ss_dssp TCCTTCEEEEESCTT-TTTHHHHHT---TSSEEEEEESCHHHHHHHHHHHHHTT-C-CSEEEEECCTTSCCSSSGGGTTC
T ss_pred cCCCCCEEEECCCCC-CHHHHHHHh---hCCEEEEEeCCHHHHHHHHHHHHHcC-C-CceEEEECCHHHHhhhhhhhcCC
Confidence 456788999999995 677788888 37899999999999999999999998 4 489999999987332 2347
Q ss_pred cceeehhhhc-cCChhHHHHHHHHHHhhccCCcEEEEe
Q 042119 203 YDCIFLAALV-GMSKEEKLTILGHIRKYMKDGGILLVR 239 (286)
Q Consensus 203 fD~V~~aalv-g~~~~~k~~vl~~l~~~l~pgg~lv~r 239 (286)
||+|+++--- |. .++++.+.+ ++|++++.+.
T Consensus 357 fD~Vv~dPPr~g~-----~~~~~~l~~-~~p~~ivyvs 388 (433)
T 1uwv_A 357 FDKVLLDPARAGA-----AGVMQQIIK-LEPIRIVYVS 388 (433)
T ss_dssp CSEEEECCCTTCC-----HHHHHHHHH-HCCSEEEEEE
T ss_pred CCEEEECCCCccH-----HHHHHHHHh-cCCCeEEEEE
Confidence 9999976321 21 146666664 6888877664
No 253
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.93 E-value=1.7e-09 Score=103.85 Aligned_cols=75 Identities=16% Similarity=0.104 Sum_probs=64.1
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhc--CCCCCCeEEEEccccchhhcC--CCcc
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASD--AEFEGRMKFLTRDIMEVKEQL--GEYD 204 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~--g~l~~~i~f~~~D~~~~~~~l--~~fD 204 (286)
.++.+|||+|||. |..++.+|+ .+.+|+++|+|+++++.|+++++.. | + ++++|+++|+.+..... +.||
T Consensus 92 ~~g~~VLDLgcG~-G~~al~LA~---~g~~V~~VD~s~~~l~~Ar~N~~~~~~g-l-~~i~~i~~Da~~~L~~~~~~~fD 165 (410)
T 3ll7_A 92 REGTKVVDLTGGL-GIDFIALMS---KASQGIYIERNDETAVAARHNIPLLLNE-G-KDVNILTGDFKEYLPLIKTFHPD 165 (410)
T ss_dssp CTTCEEEESSCSS-SHHHHHHHT---TCSEEEEEESCHHHHHHHHHHHHHHSCT-T-CEEEEEESCGGGSHHHHHHHCCS
T ss_pred CCCCEEEEeCCCc-hHHHHHHHh---cCCEEEEEECCHHHHHHHHHhHHHhccC-C-CcEEEEECcHHHhhhhccCCCce
Confidence 3489999999995 777888988 5789999999999999999999998 8 5 78999999998753322 4799
Q ss_pred eeehh
Q 042119 205 CIFLA 209 (286)
Q Consensus 205 ~V~~a 209 (286)
+||++
T Consensus 166 vV~lD 170 (410)
T 3ll7_A 166 YIYVD 170 (410)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99986
No 254
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.88 E-value=6.3e-09 Score=95.93 Aligned_cols=79 Identities=13% Similarity=0.107 Sum_probs=64.2
Q ss_pred CCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhc-----CC
Q 042119 127 GVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQ-----LG 201 (286)
Q Consensus 127 ~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~-----l~ 201 (286)
.+.++.+|||+|||+++.| +.++++ .++++|+|+|+|++|++.|++.++..| ++++|+++|..+++.. ..
T Consensus 23 ~~~~g~~vLD~g~G~G~~s-~~la~~-~~~~~VigvD~d~~al~~A~~~~~~~g---~~v~~v~~d~~~l~~~l~~~g~~ 97 (301)
T 1m6y_A 23 KPEDEKIILDCTVGEGGHS-RAILEH-CPGCRIIGIDVDSEVLRIAEEKLKEFS---DRVSLFKVSYREADFLLKTLGIE 97 (301)
T ss_dssp CCCTTCEEEETTCTTSHHH-HHHHHH-CTTCEEEEEESCHHHHHHHHHHTGGGT---TTEEEEECCGGGHHHHHHHTTCS
T ss_pred CCCCCCEEEEEeCCcCHHH-HHHHHH-CCCCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEECCHHHHHHHHHhcCCC
Confidence 5678899999999986665 556652 568999999999999999999988776 5899999999876531 14
Q ss_pred Ccceeehhh
Q 042119 202 EYDCIFLAA 210 (286)
Q Consensus 202 ~fD~V~~aa 210 (286)
.||.|+++.
T Consensus 98 ~~D~Vl~D~ 106 (301)
T 1m6y_A 98 KVDGILMDL 106 (301)
T ss_dssp CEEEEEEEC
T ss_pred CCCEEEEcC
Confidence 799998764
No 255
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.85 E-value=2.1e-08 Score=92.15 Aligned_cols=80 Identities=14% Similarity=0.177 Sum_probs=63.1
Q ss_pred HHHhcCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCC
Q 042119 122 ILSENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLG 201 (286)
Q Consensus 122 ~l~~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~ 201 (286)
.+....+.++++|||||||++.+ +..+++ .+.+|++||+|+++++.+++.++.. ++++++++|+.++..+..
T Consensus 42 Iv~~l~~~~~~~VLEIG~G~G~l-T~~La~---~~~~V~aVEid~~li~~a~~~~~~~----~~v~vi~gD~l~~~~~~~ 113 (295)
T 3gru_A 42 AVESANLTKDDVVLEIGLGKGIL-TEELAK---NAKKVYVIEIDKSLEPYANKLKELY----NNIEIIWGDALKVDLNKL 113 (295)
T ss_dssp HHHHTTCCTTCEEEEECCTTSHH-HHHHHH---HSSEEEEEESCGGGHHHHHHHHHHC----SSEEEEESCTTTSCGGGS
T ss_pred HHHhcCCCCcCEEEEECCCchHH-HHHHHh---cCCEEEEEECCHHHHHHHHHHhccC----CCeEEEECchhhCCcccC
Confidence 34445677889999999997554 566776 3789999999999999999998732 479999999987655444
Q ss_pred Ccceeehh
Q 042119 202 EYDCIFLA 209 (286)
Q Consensus 202 ~fD~V~~a 209 (286)
.||.|+..
T Consensus 114 ~fD~Iv~N 121 (295)
T 3gru_A 114 DFNKVVAN 121 (295)
T ss_dssp CCSEEEEE
T ss_pred CccEEEEe
Confidence 69998843
No 256
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.85 E-value=1.5e-09 Score=97.81 Aligned_cols=78 Identities=15% Similarity=0.121 Sum_probs=65.1
Q ss_pred CCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCCh-------HHHHHHHHHHHhcCCCCCCeEEEEccccchhhcC
Q 042119 128 VVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDE-------AANDVARSIVASDAEFEGRMKFLTRDIMEVKEQL 200 (286)
Q Consensus 128 ~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~-------~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l 200 (286)
..++.+|||+|||. |..++.+|+ .|++|+++|+|+ ++++.|+++++..| +.++|+|+++|+.+....+
T Consensus 81 ~~~~~~VLDlgcG~-G~~a~~lA~---~g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~-~~~ri~~~~~d~~~~l~~~ 155 (258)
T 2r6z_A 81 HTAHPTVWDATAGL-GRDSFVLAS---LGLTVTAFEQHPAVACLLSDGIRRALLNPETQD-TAARINLHFGNAAEQMPAL 155 (258)
T ss_dssp GGGCCCEEETTCTT-CHHHHHHHH---TTCCEEEEECCHHHHHHHHHHHHHHHHSHHHHH-HHTTEEEEESCHHHHHHHH
T ss_pred cCCcCeEEEeeCcc-CHHHHHHHH---hCCEEEEEECChhhhHHHHHHHHHHHhHHHhhC-CccCeEEEECCHHHHHHhh
Confidence 35678999999995 777888998 478999999999 99999999988877 5678999999998864322
Q ss_pred ----CCcceeehhh
Q 042119 201 ----GEYDCIFLAA 210 (286)
Q Consensus 201 ----~~fD~V~~aa 210 (286)
..||+|+++-
T Consensus 156 ~~~~~~fD~V~~dP 169 (258)
T 2r6z_A 156 VKTQGKPDIVYLDP 169 (258)
T ss_dssp HHHHCCCSEEEECC
T ss_pred hccCCCccEEEECC
Confidence 4799999853
No 257
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.85 E-value=7.3e-09 Score=93.45 Aligned_cols=113 Identities=20% Similarity=0.194 Sum_probs=81.2
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhc------CCC-----cEEEEEeCCh---H-----------HHHHHHHHHHh-----
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHH------LTS-----THFDNFDIDE---A-----------ANDVARSIVAS----- 178 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~------~~g-----~~V~~iDid~---~-----------ai~~Ar~~~~~----- 178 (286)
.++.+||+||+| +|++++.+++.. .|. .+|+++|.+| + ..++|+++++.
T Consensus 59 ~~~~~ILEiGfG-tG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~ 137 (257)
T 2qy6_A 59 HPLFVVAESGFG-TGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPL 137 (257)
T ss_dssp SSEEEEEESCCT-TSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSC
T ss_pred CCCCEEEEECCC-hHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccc
Confidence 456799999999 699998877632 453 5999999987 3 44478888775
Q ss_pred -------cCCCCCCeEEEEccccchhhcCC-----Ccceeehhhhcc-CChhH-HHHHHHHHHhhccCCcEEEEeecC
Q 042119 179 -------DAEFEGRMKFLTRDIMEVKEQLG-----EYDCIFLAALVG-MSKEE-KLTILGHIRKYMKDGGILLVRSAK 242 (286)
Q Consensus 179 -------~g~l~~~i~f~~~D~~~~~~~l~-----~fD~V~~aalvg-~~~~~-k~~vl~~l~~~l~pgg~lv~r~~~ 242 (286)
+..-..+++++.||+.+....+. .||+||++++.. ..++. ..++++.+++.|+|||+++.=++.
T Consensus 138 ~g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~tysaa 215 (257)
T 2qy6_A 138 PGCHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFTSA 215 (257)
T ss_dssp SEEEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEESCCB
T ss_pred cchhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEEEeCC
Confidence 11001467899999998655542 699999987641 11111 357999999999999999974443
No 258
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.82 E-value=6.2e-10 Score=100.75 Aligned_cols=106 Identities=14% Similarity=0.111 Sum_probs=70.8
Q ss_pred cCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHH-HhcCCCCCCeEEE--EccccchhhcCCC
Q 042119 126 NGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIV-ASDAEFEGRMKFL--TRDIMEVKEQLGE 202 (286)
Q Consensus 126 ~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~-~~~g~l~~~i~f~--~~D~~~~~~~l~~ 202 (286)
..+.++.+||||||||+++| ..+|+ . .+|+|||+++ ++..+++.. .... .+.++.|+ ++|+.+++ ...
T Consensus 70 ~~~~~g~~VLDlGcGtG~~s-~~la~---~-~~V~gvD~s~-m~~~a~~~~~~~~~-~~~~v~~~~~~~D~~~l~--~~~ 140 (265)
T 2oxt_A 70 GYVELTGRVVDLGCGRGGWS-YYAAS---R-PHVMDVRAYT-LGVGGHEVPRITES-YGWNIVKFKSRVDIHTLP--VER 140 (265)
T ss_dssp TSCCCCEEEEEESCTTSHHH-HHHHT---S-TTEEEEEEEC-CCCSSCCCCCCCCB-TTGGGEEEECSCCTTTSC--CCC
T ss_pred CCCCCCCEEEEeCcCCCHHH-HHHHH---c-CcEEEEECch-hhhhhhhhhhhhhc-cCCCeEEEecccCHhHCC--CCC
Confidence 34578899999999997765 66777 2 7899999998 432222110 0001 11268999 99998765 357
Q ss_pred cceeehhhh-c-cCChhH-H--HHHHHHHHhhccCCc--EEEEee
Q 042119 203 YDCIFLAAL-V-GMSKEE-K--LTILGHIRKYMKDGG--ILLVRS 240 (286)
Q Consensus 203 fD~V~~aal-v-g~~~~~-k--~~vl~~l~~~l~pgg--~lv~r~ 240 (286)
||+|+.+.. + +...-+ . ..+|+.+.+.|+||| .+++..
T Consensus 141 fD~V~sd~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv 185 (265)
T 2oxt_A 141 TDVIMCDVGESSPKWSVESERTIKILELLEKWKVKNPSADFVVKV 185 (265)
T ss_dssp CSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred CcEEEEeCcccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEe
Confidence 999986532 1 111111 1 248999999999999 999864
No 259
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.81 E-value=8.8e-09 Score=95.72 Aligned_cols=110 Identities=17% Similarity=0.228 Sum_probs=81.2
Q ss_pred CCCCCEEEEeccCCChhhHHHHHhhcCC-----CcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCC
Q 042119 128 VVQPKKVAFVGSGPMPLTSIIMAKHHLT-----STHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGE 202 (286)
Q Consensus 128 ~~~~~~VL~IG~G~lp~tai~lA~~~~~-----g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~ 202 (286)
..++.+|+|+|||+++++. .++++ .+ +.+|+|+|+|+.+++.|+..+...| + ++++.++|..+.. ....
T Consensus 128 ~~~~~~VlDp~cGsG~~l~-~~~~~-~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g-~--~~~i~~~D~l~~~-~~~~ 201 (344)
T 2f8l_A 128 KKKNVSILDPACGTANLLT-TVINQ-LELKGDVDVHASGVDVDDLLISLALVGADLQR-Q--KMTLLHQDGLANL-LVDP 201 (344)
T ss_dssp TCSEEEEEETTCTTSHHHH-HHHHH-HHTTSSCEEEEEEEESCHHHHHHHHHHHHHHT-C--CCEEEESCTTSCC-CCCC
T ss_pred CCCCCEEEeCCCCccHHHH-HHHHH-HHHhcCCCceEEEEECCHHHHHHHHHHHHhCC-C--CceEEECCCCCcc-ccCC
Confidence 3467899999999876654 44442 22 2899999999999999999998888 4 6899999986532 2357
Q ss_pred cceeehhhhccC-ChhH----------------HHHHHHHHHhhccCCcEEEEeecCc
Q 042119 203 YDCIFLAALVGM-SKEE----------------KLTILGHIRKYMKDGGILLVRSAKG 243 (286)
Q Consensus 203 fD~V~~aalvg~-~~~~----------------k~~vl~~l~~~l~pgg~lv~r~~~g 243 (286)
||+|+..--.|. +..+ ...+++++.+.|+|||++++-.+++
T Consensus 202 fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~ 259 (344)
T 2f8l_A 202 VDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDA 259 (344)
T ss_dssp EEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGG
T ss_pred ccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECch
Confidence 999986532111 1111 1258999999999999998887655
No 260
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.79 E-value=6.5e-08 Score=92.20 Aligned_cols=116 Identities=12% Similarity=0.068 Sum_probs=81.1
Q ss_pred HHhcCCCCCCEEEEeccCCChhhHHHHHhh---cCCC----------------------------------cEEEEEeCC
Q 042119 123 LSENGVVQPKKVAFVGSGPMPLTSIIMAKH---HLTS----------------------------------THFDNFDID 165 (286)
Q Consensus 123 l~~~~~~~~~~VL~IG~G~lp~tai~lA~~---~~~g----------------------------------~~V~~iDid 165 (286)
+...+..++.+|+|.|||++.+ ++..|.. ..|| .+|+|+|+|
T Consensus 194 l~l~~~~~~~~vlDp~CGSGt~-~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid 272 (393)
T 3k0b_A 194 VLLTSWHPDRPFYDPVCGSGTI-PIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDID 272 (393)
T ss_dssp HHHSCCCTTSCEEETTCTTSHH-HHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESC
T ss_pred HHHhCCCCCCeEEEcCCCCCHH-HHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECC
Confidence 3445667889999999997544 3444431 1122 579999999
Q ss_pred hHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeehhhhccCCh---hHHHHHHHHHHhhccC--CcEEEEee
Q 042119 166 EAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFLAALVGMSK---EEKLTILGHIRKYMKD--GGILLVRS 240 (286)
Q Consensus 166 ~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~aalvg~~~---~~k~~vl~~l~~~l~p--gg~lv~r~ 240 (286)
+.|++.|+++++..| +.++++|+++|+.+++.+ ..||+|+..---|... ++..+++..+.+.+++ |+.+.+-+
T Consensus 273 ~~al~~Ar~Na~~~g-l~~~I~~~~~D~~~~~~~-~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit 350 (393)
T 3k0b_A 273 ARLIEIAKQNAVEAG-LGDLITFRQLQVADFQTE-DEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVYVLT 350 (393)
T ss_dssp HHHHHHHHHHHHHTT-CTTCSEEEECCGGGCCCC-CCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEEEEE
T ss_pred HHHHHHHHHHHHHcC-CCCceEEEECChHhCCCC-CCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 999999999999999 778899999999887653 4799998762212111 2334456666666665 77666554
Q ss_pred c
Q 042119 241 A 241 (286)
Q Consensus 241 ~ 241 (286)
+
T Consensus 351 ~ 351 (393)
T 3k0b_A 351 S 351 (393)
T ss_dssp C
T ss_pred C
Confidence 3
No 261
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.79 E-value=1.1e-09 Score=99.61 Aligned_cols=105 Identities=14% Similarity=0.141 Sum_probs=70.5
Q ss_pred CCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHH-HhcCCCCCCeEEE--EccccchhhcCCCc
Q 042119 127 GVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIV-ASDAEFEGRMKFL--TRDIMEVKEQLGEY 203 (286)
Q Consensus 127 ~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~-~~~g~l~~~i~f~--~~D~~~~~~~l~~f 203 (286)
...++.+|||+||||+++| ..+|+ . .+|+|||+++ ++..|++.. .... .+.+++|+ ++|+.+++ .+.|
T Consensus 79 ~~~~g~~VLDlGcGtG~~s-~~la~---~-~~V~gVD~s~-m~~~a~~~~~~~~~-~~~~v~~~~~~~D~~~l~--~~~f 149 (276)
T 2wa2_A 79 GVELKGTVVDLGCGRGSWS-YYAAS---Q-PNVREVKAYT-LGTSGHEKPRLVET-FGWNLITFKSKVDVTKME--PFQA 149 (276)
T ss_dssp SCCCCEEEEEESCTTCHHH-HHHHT---S-TTEEEEEEEC-CCCTTSCCCCCCCC-TTGGGEEEECSCCGGGCC--CCCC
T ss_pred CCCCCCEEEEeccCCCHHH-HHHHH---c-CCEEEEECch-hhhhhhhchhhhhh-cCCCeEEEeccCcHhhCC--CCCc
Confidence 4567899999999997765 66777 2 6899999998 533332210 0011 11278999 99998765 3579
Q ss_pred ceeehhhh-c-cCCh-hHH--HHHHHHHHhhccCCc--EEEEee
Q 042119 204 DCIFLAAL-V-GMSK-EEK--LTILGHIRKYMKDGG--ILLVRS 240 (286)
Q Consensus 204 D~V~~aal-v-g~~~-~~k--~~vl~~l~~~l~pgg--~lv~r~ 240 (286)
|+|+.+.. + +... ... .++++.+.+.|+||| .+++..
T Consensus 150 D~Vvsd~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~ 193 (276)
T 2wa2_A 150 DTVLCDIGESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKV 193 (276)
T ss_dssp SEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEE
T ss_pred CEEEECCCcCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEe
Confidence 99986532 1 1111 111 248999999999999 988854
No 262
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.76 E-value=3.5e-09 Score=97.66 Aligned_cols=104 Identities=11% Similarity=0.102 Sum_probs=70.5
Q ss_pred CCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeC----ChHHHHHHHHHHHhcCCCCCCeEEEEc-cccchhhcCC
Q 042119 127 GVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDI----DEAANDVARSIVASDAEFEGRMKFLTR-DIMEVKEQLG 201 (286)
Q Consensus 127 ~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDi----d~~ai~~Ar~~~~~~g~l~~~i~f~~~-D~~~~~~~l~ 201 (286)
...++.+||||||||++.| ..+|+ . ++|+|+|+ ++.+++..+ .+..| .++++|+++ |+.+++ ..
T Consensus 79 ~~~~g~~VLDlGcG~G~~s-~~la~---~-~~V~gvD~~~~~~~~~~~~~~--~~~~~--~~~v~~~~~~D~~~l~--~~ 147 (305)
T 2p41_A 79 LVTPEGKVVDLGCGRGGWS-YYCGG---L-KNVREVKGLTKGGPGHEEPIP--MSTYG--WNLVRLQSGVDVFFIP--PE 147 (305)
T ss_dssp SSCCCEEEEEETCTTSHHH-HHHHT---S-TTEEEEEEECCCSTTSCCCCC--CCSTT--GGGEEEECSCCTTTSC--CC
T ss_pred CCCCCCEEEEEcCCCCHHH-HHHHh---c-CCEEEEeccccCchhHHHHHH--hhhcC--CCCeEEEeccccccCC--cC
Confidence 3467899999999997775 66777 2 58999999 554432111 11222 157999999 987654 35
Q ss_pred Ccceeehhhhc--cCChhHH---HHHHHHHHhhccCCcEEEEeec
Q 042119 202 EYDCIFLAALV--GMSKEEK---LTILGHIRKYMKDGGILLVRSA 241 (286)
Q Consensus 202 ~fD~V~~aalv--g~~~~~k---~~vl~~l~~~l~pgg~lv~r~~ 241 (286)
.||+|+.+... +....+. ..+|..+.+.|||||.+++...
T Consensus 148 ~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~ 192 (305)
T 2p41_A 148 RCDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVL 192 (305)
T ss_dssp CCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEES
T ss_pred CCCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 79999865321 2211122 2588999999999999998653
No 263
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.76 E-value=7.6e-08 Score=91.53 Aligned_cols=116 Identities=11% Similarity=0.085 Sum_probs=83.6
Q ss_pred HHhcCCCCCCEEEEeccCCChhhHHHHHhh---cCCC----------------------------------cEEEEEeCC
Q 042119 123 LSENGVVQPKKVAFVGSGPMPLTSIIMAKH---HLTS----------------------------------THFDNFDID 165 (286)
Q Consensus 123 l~~~~~~~~~~VL~IG~G~lp~tai~lA~~---~~~g----------------------------------~~V~~iDid 165 (286)
+...+..++..|+|.+||++.+ ++..|.. ..|| .+|+|+|+|
T Consensus 187 l~l~~~~~~~~llDp~CGSGt~-lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid 265 (384)
T 3ldg_A 187 ILLSNWFPDKPFVDPTCGSGTF-CIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFD 265 (384)
T ss_dssp HHHTTCCTTSCEEETTCTTSHH-HHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESC
T ss_pred HHHhCCCCCCeEEEeCCcCCHH-HHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECC
Confidence 4445667889999999997544 3444431 1122 569999999
Q ss_pred hHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeehhhhcc---CChhHHHHHHHHHHhhccC--CcEEEEee
Q 042119 166 EAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFLAALVG---MSKEEKLTILGHIRKYMKD--GGILLVRS 240 (286)
Q Consensus 166 ~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~aalvg---~~~~~k~~vl~~l~~~l~p--gg~lv~r~ 240 (286)
+.|++.|+++++..| +.++++|+++|+.+++.. ..||+|+..---| .+.++..+++..+.+.+++ |+.+.+-+
T Consensus 266 ~~al~~Ar~Na~~~g-l~~~I~~~~~D~~~l~~~-~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit 343 (384)
T 3ldg_A 266 GRMVEIARKNAREVG-LEDVVKLKQMRLQDFKTN-KINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFILT 343 (384)
T ss_dssp HHHHHHHHHHHHHTT-CTTTEEEEECCGGGCCCC-CCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEEEE
T ss_pred HHHHHHHHHHHHHcC-CCCceEEEECChHHCCcc-CCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEEEE
Confidence 999999999999999 788999999999887654 4799998752211 1234556677777777776 77766654
Q ss_pred c
Q 042119 241 A 241 (286)
Q Consensus 241 ~ 241 (286)
+
T Consensus 344 ~ 344 (384)
T 3ldg_A 344 N 344 (384)
T ss_dssp S
T ss_pred C
Confidence 3
No 264
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.73 E-value=4.4e-08 Score=93.06 Aligned_cols=115 Identities=15% Similarity=0.135 Sum_probs=81.6
Q ss_pred HHhcCCCCCCEEEEeccCCChhhHHHHHhhc---CC----------------------------------CcEEEEEeCC
Q 042119 123 LSENGVVQPKKVAFVGSGPMPLTSIIMAKHH---LT----------------------------------STHFDNFDID 165 (286)
Q Consensus 123 l~~~~~~~~~~VL~IG~G~lp~tai~lA~~~---~~----------------------------------g~~V~~iDid 165 (286)
+...+..++.+|+|.|||++.+ ++..|... .| ..+|+|+|+|
T Consensus 188 l~~~~~~~~~~vlDp~CGSGt~-lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid 266 (385)
T 3ldu_A 188 IYLTPWKAGRVLVDPMCGSGTI-LIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDID 266 (385)
T ss_dssp HHTSCCCTTSCEEETTCTTCHH-HHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESC
T ss_pred HHhhCCCCCCeEEEcCCCCCHH-HHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECC
Confidence 3345567889999999997544 44444421 11 2679999999
Q ss_pred hHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeehhhhccCC---hhHHHHHHHHHHhhccC--CcEEEEee
Q 042119 166 EAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFLAALVGMS---KEEKLTILGHIRKYMKD--GGILLVRS 240 (286)
Q Consensus 166 ~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~aalvg~~---~~~k~~vl~~l~~~l~p--gg~lv~r~ 240 (286)
+.+++.|++++...| +.++|+|.++|+.+++.+ ..||+|+..---|.. .++..+++..+.+.+++ |+.+.+-+
T Consensus 267 ~~ai~~Ar~Na~~~g-l~~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit 344 (385)
T 3ldu_A 267 EESIDIARENAEIAG-VDEYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYYLIT 344 (385)
T ss_dssp HHHHHHHHHHHHHHT-CGGGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEEEEE
T ss_pred HHHHHHHHHHHHHcC-CCCceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEEEEE
Confidence 999999999999999 777899999999886653 479999874322211 23345567777777766 76655544
No 265
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.70 E-value=1.1e-07 Score=84.45 Aligned_cols=67 Identities=13% Similarity=0.263 Sum_probs=53.5
Q ss_pred hcCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhc
Q 042119 125 ENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQ 199 (286)
Q Consensus 125 ~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~ 199 (286)
...+.++.+|||||||++.+ +..+++ .+.+|+++|+|+++++.+++.+... ++++++++|+.+++..
T Consensus 25 ~~~~~~~~~VLDiG~G~G~l-t~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~----~~v~~~~~D~~~~~~~ 91 (244)
T 1qam_A 25 NIRLNEHDNIFEIGSGKGHF-TLELVQ---RCNFVTAIEIDHKLCKTTENKLVDH----DNFQVLNKDILQFKFP 91 (244)
T ss_dssp TCCCCTTCEEEEECCTTSHH-HHHHHH---HSSEEEEECSCHHHHHHHHHHTTTC----CSEEEECCCGGGCCCC
T ss_pred hCCCCCCCEEEEEeCCchHH-HHHHHH---cCCeEEEEECCHHHHHHHHHhhccC----CCeEEEEChHHhCCcc
Confidence 44567889999999997554 566676 3589999999999999999986532 5799999999886543
No 266
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.70 E-value=2.9e-08 Score=94.18 Aligned_cols=109 Identities=19% Similarity=0.174 Sum_probs=80.2
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhc-----CC-CCCCeEEEEccccchhh----
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASD-----AE-FEGRMKFLTRDIMEVKE---- 198 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~-----g~-l~~~i~f~~~D~~~~~~---- 198 (286)
.++++||.||.|- |.++-.+.+ .+..+|+.+||||+.+++|++.+... .. -.+|++++.+|+.+...
T Consensus 204 ~~pkrVLIIGgGd-G~~~revlk--h~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~ 280 (381)
T 3c6k_A 204 YTGKDVLILGGGD-GGILCEIVK--LKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAK 280 (381)
T ss_dssp CTTCEEEEEECTT-CHHHHHHHT--TCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHH
T ss_pred CCCCeEEEECCCc-HHHHHHHHh--cCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhh
Confidence 4679999999995 666666666 25689999999999999999985321 10 12579999999987654
Q ss_pred cCCCcceeehhhhc--------cCCh-hHHHHHHHHHHhhccCCcEEEEee
Q 042119 199 QLGEYDCIFLAALV--------GMSK-EEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 199 ~l~~fD~V~~aalv--------g~~~-~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
.-+.||+|+++..- +... .=..++++.+.+.|+|||+++...
T Consensus 281 ~~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~ 331 (381)
T 3c6k_A 281 EGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 331 (381)
T ss_dssp HTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ccCceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEec
Confidence 23479999988531 1010 113578999999999999999875
No 267
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.69 E-value=5.2e-08 Score=87.67 Aligned_cols=66 Identities=8% Similarity=0.082 Sum_probs=54.3
Q ss_pred hcCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhh
Q 042119 125 ENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKE 198 (286)
Q Consensus 125 ~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~ 198 (286)
...+.++.+|||||||++. .+..+++ .+.+|+++|+|+++++.+++.+.. . ++++++++|+.+++.
T Consensus 24 ~~~~~~~~~VLEIG~G~G~-lt~~La~---~~~~V~avEid~~~~~~~~~~~~~-~---~~v~~i~~D~~~~~~ 89 (255)
T 3tqs_A 24 AIHPQKTDTLVEIGPGRGA-LTDYLLT---ECDNLALVEIDRDLVAFLQKKYNQ-Q---KNITIYQNDALQFDF 89 (255)
T ss_dssp HHCCCTTCEEEEECCTTTT-THHHHTT---TSSEEEEEECCHHHHHHHHHHHTT-C---TTEEEEESCTTTCCG
T ss_pred hcCCCCcCEEEEEcccccH-HHHHHHH---hCCEEEEEECCHHHHHHHHHHHhh-C---CCcEEEEcchHhCCH
Confidence 4467788999999999755 4566776 468999999999999999998765 2 589999999988654
No 268
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.64 E-value=1.2e-09 Score=96.72 Aligned_cols=106 Identities=17% Similarity=0.199 Sum_probs=70.1
Q ss_pred hcCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcC-CCc
Q 042119 125 ENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQL-GEY 203 (286)
Q Consensus 125 ~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l-~~f 203 (286)
.....++.+|||||||++.+| ..+++ .+.+|+|+|+|+++++.|++.++ + .++++++++|+.+++... +.|
T Consensus 24 ~~~~~~~~~VLDiG~G~G~~~-~~l~~---~~~~v~~id~~~~~~~~a~~~~~--~--~~~v~~~~~D~~~~~~~~~~~f 95 (245)
T 1yub_A 24 QLNLKETDTVYEIGTGKGHLT-TKLAK---ISKQVTSIELDSHLFNLSSEKLK--L--NTRVTLIHQDILQFQFPNKQRY 95 (245)
T ss_dssp HCCCCSSEEEEECSCCCSSCS-HHHHH---HSSEEEESSSSCSSSSSSSCTTT--T--CSEEEECCSCCTTTTCCCSSEE
T ss_pred hcCCCCCCEEEEEeCCCCHHH-HHHHH---hCCeEEEEECCHHHHHHHHHHhc--c--CCceEEEECChhhcCcccCCCc
Confidence 345678899999999986655 56666 35899999999999999988755 2 268999999998866432 357
Q ss_pred ceeehhhhccCChhHHH----------HHH----HHHHhhccCCcEEEEe
Q 042119 204 DCIFLAALVGMSKEEKL----------TIL----GHIRKYMKDGGILLVR 239 (286)
Q Consensus 204 D~V~~aalvg~~~~~k~----------~vl----~~l~~~l~pgg~lv~r 239 (286)
.|+..---....+.-. .++ +.+.+.|+|||.+.+.
T Consensus 96 -~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~ 144 (245)
T 1yub_A 96 -KIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLL 144 (245)
T ss_dssp -EEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHH
T ss_pred -EEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhh
Confidence 3332100000001111 222 5577888888876554
No 269
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.62 E-value=5.2e-08 Score=92.01 Aligned_cols=101 Identities=20% Similarity=0.182 Sum_probs=72.9
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeeh
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFL 208 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~ 208 (286)
.++.+|||+|||++++ ++.++++..++.+|+|+|+|+++++.| .+++++++|..+... .+.||+|+.
T Consensus 38 ~~~~~vLD~gcGtG~~-~~~~~~~~~~~~~i~gvDi~~~~~~~a-----------~~~~~~~~D~~~~~~-~~~fD~Ii~ 104 (421)
T 2ih2_A 38 PRGGRVLEPACAHGPF-LRAFREAHGTAYRFVGVEIDPKALDLP-----------PWAEGILADFLLWEP-GEAFDLILG 104 (421)
T ss_dssp CTTCEEEEETCTTCHH-HHHHHHHHCSCSEEEEEESCTTTCCCC-----------TTEEEEESCGGGCCC-SSCEEEEEE
T ss_pred CCCCEEEECCCCChHH-HHHHHHHhCCCCeEEEEECCHHHHHhC-----------CCCcEEeCChhhcCc-cCCCCEEEE
Confidence 4567999999998555 455665322678999999999998776 368999999976543 247999986
Q ss_pred hhh-c--c--------CChhHH-----------------HHHHHHHHhhccCCcEEEEeecC
Q 042119 209 AAL-V--G--------MSKEEK-----------------LTILGHIRKYMKDGGILLVRSAK 242 (286)
Q Consensus 209 aal-v--g--------~~~~~k-----------------~~vl~~l~~~l~pgg~lv~r~~~ 242 (286)
.-- . + +..+.+ ..+++++.+.|+|||.+++-...
T Consensus 105 NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~ 166 (421)
T 2ih2_A 105 NPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPA 166 (421)
T ss_dssp CCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEG
T ss_pred CcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEECh
Confidence 310 0 0 112222 26799999999999998887644
No 270
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.62 E-value=1.6e-07 Score=85.24 Aligned_cols=75 Identities=12% Similarity=0.065 Sum_probs=58.0
Q ss_pred HhcCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcC-CC
Q 042119 124 SENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQL-GE 202 (286)
Q Consensus 124 ~~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l-~~ 202 (286)
...++.++ +|||||||++.+| ..+++ .+.+|+++|+|+++++.+++.+. + .+++++++|+.+++.+. ..
T Consensus 41 ~~~~~~~~-~VLEIG~G~G~lt-~~L~~---~~~~V~avEid~~~~~~l~~~~~--~---~~v~vi~~D~l~~~~~~~~~ 110 (271)
T 3fut_A 41 EAARPFTG-PVFEVGPGLGALT-RALLE---AGAEVTAIEKDLRLRPVLEETLS--G---LPVRLVFQDALLYPWEEVPQ 110 (271)
T ss_dssp HHHCCCCS-CEEEECCTTSHHH-HHHHH---TTCCEEEEESCGGGHHHHHHHTT--T---SSEEEEESCGGGSCGGGSCT
T ss_pred HhcCCCCC-eEEEEeCchHHHH-HHHHH---cCCEEEEEECCHHHHHHHHHhcC--C---CCEEEEECChhhCChhhccC
Confidence 34466778 9999999976555 56676 46899999999999999999754 2 57999999998765432 25
Q ss_pred cceeeh
Q 042119 203 YDCIFL 208 (286)
Q Consensus 203 fD~V~~ 208 (286)
||.|+.
T Consensus 111 ~~~iv~ 116 (271)
T 3fut_A 111 GSLLVA 116 (271)
T ss_dssp TEEEEE
T ss_pred ccEEEe
Confidence 787663
No 271
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.56 E-value=7.1e-08 Score=92.91 Aligned_cols=114 Identities=15% Similarity=0.112 Sum_probs=81.6
Q ss_pred CCCCCCEEEEeccCCChhhHHHHHhhc------------CCCcEEEEEeCChHHHHHHHHHHHhcCCCCC-CeEEEEccc
Q 042119 127 GVVQPKKVAFVGSGPMPLTSIIMAKHH------------LTSTHFDNFDIDEAANDVARSIVASDAEFEG-RMKFLTRDI 193 (286)
Q Consensus 127 ~~~~~~~VL~IG~G~lp~tai~lA~~~------------~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~-~i~f~~~D~ 193 (286)
.+.++.+|+|.|||++++. +.++++. ..+.+++|+|+|+.+++.|+..+...| +.. ++++.++|.
T Consensus 168 ~~~~~~~VlDpacGsG~fl-~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g-~~~~~~~i~~gD~ 245 (445)
T 2okc_A 168 NPQMGETVCDPACGTGGFL-LTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHG-IGTDRSPIVCEDS 245 (445)
T ss_dssp CCCTTCCEEETTCTTCHHH-HHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTT-CCSSCCSEEECCT
T ss_pred CCCCCCEEeccCCCcchHH-HHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhC-CCcCCCCEeeCCC
Confidence 4567789999999987765 4444421 135789999999999999999988778 442 788999998
Q ss_pred cchhhcCCCcceeehhhhc-cCChh---------------HHHHHHHHHHhhccCCcEEEEeecCc
Q 042119 194 MEVKEQLGEYDCIFLAALV-GMSKE---------------EKLTILGHIRKYMKDGGILLVRSAKG 243 (286)
Q Consensus 194 ~~~~~~l~~fD~V~~aalv-g~~~~---------------~k~~vl~~l~~~l~pgg~lv~r~~~g 243 (286)
...+.. ..||+|+..--. +.... .-..+++++.+.|+|||++++-.++|
T Consensus 246 l~~~~~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p~~ 310 (445)
T 2okc_A 246 LEKEPS-TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLPDN 310 (445)
T ss_dssp TTSCCS-SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHH
T ss_pred CCCccc-CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEECCc
Confidence 664432 379999854211 11000 11478999999999999988766443
No 272
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.52 E-value=8.9e-08 Score=86.43 Aligned_cols=81 Identities=9% Similarity=0.215 Sum_probs=63.0
Q ss_pred CCCCC--CEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCC-------CCCCeEEEEccccchh
Q 042119 127 GVVQP--KKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAE-------FEGRMKFLTRDIMEVK 197 (286)
Q Consensus 127 ~~~~~--~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~-------l~~~i~f~~~D~~~~~ 197 (286)
+..++ .+|||+||| .|..++.+|+ .|++|++||+++.+.+++++.++..+. +.++|+++++|+.+..
T Consensus 83 ~l~~g~~~~VLDl~~G-~G~dal~lA~---~g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L 158 (258)
T 2oyr_A 83 GIKGDYLPDVVDATAG-LGRDAFVLAS---VGCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTAL 158 (258)
T ss_dssp TCBTTBCCCEEETTCT-TCHHHHHHHH---HTCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHS
T ss_pred cccCCCCCEEEEcCCc-CCHHHHHHHH---cCCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHH
Confidence 34566 899999999 5888899998 478999999999988888877654320 1257999999998865
Q ss_pred hcC-CCcceeehhhh
Q 042119 198 EQL-GEYDCIFLAAL 211 (286)
Q Consensus 198 ~~l-~~fD~V~~aal 211 (286)
..+ +.||+||++-.
T Consensus 159 ~~~~~~fDvV~lDP~ 173 (258)
T 2oyr_A 159 TDITPRPQVVYLDPM 173 (258)
T ss_dssp TTCSSCCSEEEECCC
T ss_pred HhCcccCCEEEEcCC
Confidence 543 36999998753
No 273
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.44 E-value=7.6e-07 Score=90.26 Aligned_cols=104 Identities=14% Similarity=0.224 Sum_probs=76.1
Q ss_pred CCEEEEeccCCChhhHHHH--HhhcC---------CCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhc
Q 042119 131 PKKVAFVGSGPMPLTSIIM--AKHHL---------TSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQ 199 (286)
Q Consensus 131 ~~~VL~IG~G~lp~tai~l--A~~~~---------~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~ 199 (286)
++.|++||||.+|++...+ ++.+. ...+|.+||.++.|+...++... .| ++++|+++.+|+.++..+
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng-~~d~VtVI~gd~eev~lp 487 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RT-WKRRVTIIESDMRSLPGI 487 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HT-TTTCSEEEESCGGGHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cC-CCCeEEEEeCchhhcccc
Confidence 4689999999999984332 22111 23599999999988876666554 77 789999999999988653
Q ss_pred -----CCCcceeehhhhccC--ChhHHHHHHHHHHhhccCCcEEE
Q 042119 200 -----LGEYDCIFLAALVGM--SKEEKLTILGHIRKYMKDGGILL 237 (286)
Q Consensus 200 -----l~~fD~V~~aalvg~--~~~~k~~vl~~l~~~l~pgg~lv 237 (286)
....|+|+-. +.|. +-|--.+.|..+.+.|||||+++
T Consensus 488 ~~~~~~ekVDIIVSE-lmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 488 AKDRGFEQPDIIVSE-LLGSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HHHTTCCCCSEEEEC-CCBTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred cccCCCCcccEEEEe-ccccccchhccHHHHHHHHHhCCCCcEEE
Confidence 4679998733 3332 22444578899999999999875
No 274
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.43 E-value=7.5e-07 Score=79.64 Aligned_cols=103 Identities=15% Similarity=0.198 Sum_probs=67.4
Q ss_pred HhcCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcC-CC
Q 042119 124 SENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQL-GE 202 (286)
Q Consensus 124 ~~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l-~~ 202 (286)
....+.++.+|||||||+ |..+..++++ +..+|+++|+|+.+++.+++. + ..+++++++|+.+++.+. .+
T Consensus 25 ~~~~~~~~~~VLDiG~G~-G~lt~~L~~~--~~~~v~avEid~~~~~~~~~~----~--~~~v~~i~~D~~~~~~~~~~~ 95 (249)
T 3ftd_A 25 EELNIEEGNTVVEVGGGT-GNLTKVLLQH--PLKKLYVIELDREMVENLKSI----G--DERLEVINEDASKFPFCSLGK 95 (249)
T ss_dssp HHTTCCTTCEEEEEESCH-HHHHHHHTTS--CCSEEEEECCCHHHHHHHTTS----C--CTTEEEECSCTTTCCGGGSCS
T ss_pred HhcCCCCcCEEEEEcCch-HHHHHHHHHc--CCCeEEEEECCHHHHHHHHhc----c--CCCeEEEEcchhhCChhHccC
Confidence 344667889999999996 5556677762 358999999999999999987 2 158999999998765432 11
Q ss_pred cceeehhhhccCChhHHHHHHHHHHhhc--cCCcEEEEe
Q 042119 203 YDCIFLAALVGMSKEEKLTILGHIRKYM--KDGGILLVR 239 (286)
Q Consensus 203 fD~V~~aalvg~~~~~k~~vl~~l~~~l--~pgg~lv~r 239 (286)
++++++.+ ... .-..++.++.+.. -+.+++++.
T Consensus 96 -~~~vv~Nl-Py~--i~~~il~~ll~~~~~~~~~~~m~Q 130 (249)
T 3ftd_A 96 -ELKVVGNL-PYN--VASLIIENTVYNKDCVPLAVFMVQ 130 (249)
T ss_dssp -SEEEEEEC-CTT--THHHHHHHHHHTGGGCSEEEEEEE
T ss_pred -CcEEEEEC-chh--ccHHHHHHHHhcCCCCceEEEEEe
Confidence 33343433 111 2234555555543 244555554
No 275
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.43 E-value=1.2e-06 Score=89.42 Aligned_cols=116 Identities=22% Similarity=0.210 Sum_probs=79.3
Q ss_pred HHhcCCCCCCEEEEeccCCChhhHHHHHhhc---C--------------------------------------CCcEEEE
Q 042119 123 LSENGVVQPKKVAFVGSGPMPLTSIIMAKHH---L--------------------------------------TSTHFDN 161 (286)
Q Consensus 123 l~~~~~~~~~~VL~IG~G~lp~tai~lA~~~---~--------------------------------------~g~~V~~ 161 (286)
+...+..++.+|+|.+||++.+ ++..|... . +..+|+|
T Consensus 183 l~~~~~~~~~~llDP~CGSGt~-lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G 261 (703)
T 3v97_A 183 VMRSGWQPGTPLLDPMCGSGTL-LIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYG 261 (703)
T ss_dssp HHHTTCCTTSCEEETTCTTSHH-HHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEE
T ss_pred HHhhCCCCCCeEEecCCCCcHH-HHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEE
Confidence 3344567889999999997554 34443311 1 2368999
Q ss_pred EeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcC--CCcceeehhhhccC---ChhHHHHH---HHHHHhhccCC
Q 042119 162 FDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQL--GEYDCIFLAALVGM---SKEEKLTI---LGHIRKYMKDG 233 (286)
Q Consensus 162 iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l--~~fD~V~~aalvg~---~~~~k~~v---l~~l~~~l~pg 233 (286)
+|+|+.|++.|++++...| +.+.|+|.++|+.++..+. +.||+|+..---|. ..+.-..+ +.++.+.+.||
T Consensus 262 ~Did~~av~~A~~N~~~ag-v~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~~~~g 340 (703)
T 3v97_A 262 SDSDARVIQRARTNARLAG-IGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGG 340 (703)
T ss_dssp EESCHHHHHHHHHHHHHTT-CGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHHHCTT
T ss_pred EECCHHHHHHHHHHHHHcC-CCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHhhCCC
Confidence 9999999999999999999 7888999999998864433 27999986521121 11222233 44445555689
Q ss_pred cEEEEee
Q 042119 234 GILLVRS 240 (286)
Q Consensus 234 g~lv~r~ 240 (286)
|.+.+-+
T Consensus 341 ~~~~ilt 347 (703)
T 3v97_A 341 WNLSLFS 347 (703)
T ss_dssp CEEEEEE
T ss_pred CeEEEEe
Confidence 9877743
No 276
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.39 E-value=1.2e-06 Score=82.61 Aligned_cols=112 Identities=14% Similarity=0.098 Sum_probs=86.8
Q ss_pred CCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCC----CCCCeEEEEccccchhhcC-C
Q 042119 127 GVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAE----FEGRMKFLTRDIMEVKEQL-G 201 (286)
Q Consensus 127 ~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~----l~~~i~f~~~D~~~~~~~l-~ 201 (286)
.+.++.+|||.-+||+|=|+. +|. ...+..|+++|+|+..++..++++++.|. ...++.+.+.|+..+.... +
T Consensus 145 ~~~pg~~VLD~CAaPGGKT~~-la~-~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~ 222 (359)
T 4fzv_A 145 GLQPGDIVLDLCAAPGGKTLA-LLQ-TGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGD 222 (359)
T ss_dssp CCCTTEEEEESSCTTCHHHHH-HHH-TTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTT
T ss_pred CCCCCCEEEEecCCccHHHHH-HHH-hcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccc
Confidence 678999999999999988865 454 35677899999999999999999998872 1257899999998765433 4
Q ss_pred Ccceeehhhh-----ccC---C--------h-------hHHHHHHHHHHhhccCCcEEEEee
Q 042119 202 EYDCIFLAAL-----VGM---S--------K-------EEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 202 ~fD~V~~aal-----vg~---~--------~-------~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
.||.|++++- +|. + . .--.++|++..+.+||||+||+.+
T Consensus 223 ~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsT 284 (359)
T 4fzv_A 223 TYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYST 284 (359)
T ss_dssp CEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEe
Confidence 7999998752 111 0 0 012468999999999999999975
No 277
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.38 E-value=1.1e-06 Score=88.55 Aligned_cols=102 Identities=14% Similarity=0.191 Sum_probs=75.6
Q ss_pred CCCEEEEeccCCChhhHHHHHhh--cCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceee
Q 042119 130 QPKKVAFVGSGPMPLTSIIMAKH--HLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIF 207 (286)
Q Consensus 130 ~~~~VL~IG~G~lp~tai~lA~~--~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~ 207 (286)
.+..|++||||.+|++...+... .....+|.+||.+| +...|++++++.| ++++|+++.||+.++..+ .+.|+|+
T Consensus 357 ~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~-~~dkVtVI~gd~eev~LP-EKVDIIV 433 (637)
T 4gqb_A 357 NVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEE-WGSQVTVVSSDMREWVAP-EKADIIV 433 (637)
T ss_dssp CEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHT-TGGGEEEEESCTTTCCCS-SCEEEEE
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhcc-CCCeEEEEeCcceeccCC-cccCEEE
Confidence 44679999999999854444321 12234789999997 5668999999999 899999999999886544 4799986
Q ss_pred hh---hh-ccCChhHHHHHHHHHHhhccCCcEEE
Q 042119 208 LA---AL-VGMSKEEKLTILGHIRKYMKDGGILL 237 (286)
Q Consensus 208 ~a---al-vg~~~~~k~~vl~~l~~~l~pgg~lv 237 (286)
-. .+ .+ |.-.+++....|.|||||+++
T Consensus 434 SEwMG~fLl~---E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 434 SELLGSFADN---ELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp CCCCBTTBGG---GCHHHHHHHHGGGEEEEEEEE
T ss_pred EEcCcccccc---cCCHHHHHHHHHhcCCCcEEc
Confidence 32 22 22 222368888999999999874
No 278
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.36 E-value=3.7e-07 Score=81.90 Aligned_cols=65 Identities=11% Similarity=0.119 Sum_probs=50.6
Q ss_pred hcCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchh
Q 042119 125 ENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVK 197 (286)
Q Consensus 125 ~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~ 197 (286)
...+.++.+|||||||++.+|. +++ ....+|+++|+|+++++.+++.+... ++++++++|+.+++
T Consensus 16 ~~~~~~~~~VLEIG~G~G~lt~--l~~--~~~~~v~avEid~~~~~~a~~~~~~~----~~v~~i~~D~~~~~ 80 (252)
T 1qyr_A 16 AINPQKGQAMVEIGPGLAALTE--PVG--ERLDQLTVIELDRDLAARLQTHPFLG----PKLTIYQQDAMTFN 80 (252)
T ss_dssp HHCCCTTCCEEEECCTTTTTHH--HHH--TTCSCEEEECCCHHHHHHHHTCTTTG----GGEEEECSCGGGCC
T ss_pred hcCCCCcCEEEEECCCCcHHHH--hhh--CCCCeEEEEECCHHHHHHHHHHhccC----CceEEEECchhhCC
Confidence 3356788999999999877776 554 22233999999999999999875432 47999999998754
No 279
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.35 E-value=7.5e-07 Score=81.10 Aligned_cols=68 Identities=10% Similarity=0.077 Sum_probs=52.1
Q ss_pred HhcCCCCCCEEEEeccCCChhhHHHHHhhcCC-CcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhh
Q 042119 124 SENGVVQPKKVAFVGSGPMPLTSIIMAKHHLT-STHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKE 198 (286)
Q Consensus 124 ~~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~-g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~ 198 (286)
....+.++.+|||||||++.+| ..++++... +++|+++|+|+++++.+++.. . .+++++++|+.+++.
T Consensus 36 ~~~~~~~~~~VLEIG~G~G~lt-~~La~~~~~~~~~V~avDid~~~l~~a~~~~---~---~~v~~i~~D~~~~~~ 104 (279)
T 3uzu_A 36 AAIRPERGERMVEIGPGLGALT-GPVIARLATPGSPLHAVELDRDLIGRLEQRF---G---ELLELHAGDALTFDF 104 (279)
T ss_dssp HHHCCCTTCEEEEECCTTSTTH-HHHHHHHCBTTBCEEEEECCHHHHHHHHHHH---G---GGEEEEESCGGGCCG
T ss_pred HhcCCCCcCEEEEEccccHHHH-HHHHHhCCCcCCeEEEEECCHHHHHHHHHhc---C---CCcEEEECChhcCCh
Confidence 3446678899999999986665 555652222 245999999999999999983 3 479999999987654
No 280
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.21 E-value=3.1e-06 Score=83.72 Aligned_cols=115 Identities=13% Similarity=0.103 Sum_probs=80.9
Q ss_pred CCCCCCEEEEeccCCChhhHHHHHhhc---C--------------CCcEEEEEeCChHHHHHHHHHHHhcCCCCC----C
Q 042119 127 GVVQPKKVAFVGSGPMPLTSIIMAKHH---L--------------TSTHFDNFDIDEAANDVARSIVASDAEFEG----R 185 (286)
Q Consensus 127 ~~~~~~~VL~IG~G~lp~tai~lA~~~---~--------------~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~----~ 185 (286)
.+.++.+|+|.|||++++.... +++. . ...+++|+|+|+.+++.|+..+...| ... +
T Consensus 166 ~p~~~~~VlDPaCGSG~fLi~a-~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~g-i~~~~~~~ 243 (541)
T 2ar0_A 166 KPQPREVVQDPAAGTAGFLIEA-DRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHD-IEGNLDHG 243 (541)
T ss_dssp CCCTTCCEEETTCTTTHHHHHH-HHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTT-CCCBGGGT
T ss_pred ccCCCCeEecCCcccchHHHHH-HHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhC-CCcccccc
Confidence 4567789999999988775433 3311 1 12479999999999999999888777 443 2
Q ss_pred eEEEEccccchh-hcCCCcceeehhhhccCC-------------hhHHHHHHHHHHhhccCCcEEEEeecCc
Q 042119 186 MKFLTRDIMEVK-EQLGEYDCIFLAALVGMS-------------KEEKLTILGHIRKYMKDGGILLVRSAKG 243 (286)
Q Consensus 186 i~f~~~D~~~~~-~~l~~fD~V~~aalvg~~-------------~~~k~~vl~~l~~~l~pgg~lv~r~~~g 243 (286)
+++.++|....+ .....||+|+..--.+.. ......+++++.+.|+|||++++-.++|
T Consensus 244 ~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p~~ 315 (541)
T 2ar0_A 244 GAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVPDN 315 (541)
T ss_dssp BSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHH
T ss_pred CCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEecCc
Confidence 889999986643 234579999854211110 0112469999999999999988766544
No 281
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.20 E-value=1.8e-06 Score=71.61 Aligned_cols=87 Identities=18% Similarity=0.228 Sum_probs=64.8
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcC-CCcceee
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQL-GEYDCIF 207 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l-~~fD~V~ 207 (286)
..+.||++||||+++..|..||+. .|..|+++|++|.+++ |++.|+.+...++ +.||+|+
T Consensus 34 ~~~~rVlEVG~G~g~~vA~~La~~--~g~~V~atDInp~Av~-----------------~v~dDiF~P~~~~Y~~~DLIY 94 (153)
T 2k4m_A 34 GPGTRVVEVGAGRFLYVSDYIRKH--SKVDLVLTDIKPSHGG-----------------IVRDDITSPRMEIYRGAALIY 94 (153)
T ss_dssp CSSSEEEEETCTTCCHHHHHHHHH--SCCEEEEECSSCSSTT-----------------EECCCSSSCCHHHHTTEEEEE
T ss_pred CCCCcEEEEccCCChHHHHHHHHh--CCCeEEEEECCccccc-----------------eEEccCCCCcccccCCcCEEE
Confidence 567899999999876789999963 7899999999998866 8888886633332 4899998
Q ss_pred hhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 208 LAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 208 ~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
.-.- +++-...+..+++.+ |+-++++.
T Consensus 95 sirP----P~El~~~i~~lA~~v--~adliI~p 121 (153)
T 2k4m_A 95 SIRP----PAEIHSSLMRVADAV--GARLIIKP 121 (153)
T ss_dssp EESC----CTTTHHHHHHHHHHH--TCEEEEEC
T ss_pred EcCC----CHHHHHHHHHHHHHc--CCCEEEEc
Confidence 4332 245556666777664 67788874
No 282
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=98.06 E-value=5.7e-06 Score=76.20 Aligned_cols=107 Identities=17% Similarity=0.231 Sum_probs=75.5
Q ss_pred HHHHHhcCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccch-hh
Q 042119 120 YTILSENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEV-KE 198 (286)
Q Consensus 120 ~~~l~~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~-~~ 198 (286)
+.++.+..+.++++||.+|+|++|+.++.+|+. .|++|+++|.+++..+++++ +|. ..-+.....|..+. ..
T Consensus 156 ~~~l~~~~~~~g~~VlV~GaG~vG~~a~qla~~--~Ga~Vi~~~~~~~~~~~~~~----lGa-~~~i~~~~~~~~~~~~~ 228 (340)
T 3s2e_A 156 YKGLKVTDTRPGQWVVISGIGGLGHVAVQYARA--MGLRVAAVDIDDAKLNLARR----LGA-EVAVNARDTDPAAWLQK 228 (340)
T ss_dssp HHHHHTTTCCTTSEEEEECCSTTHHHHHHHHHH--TTCEEEEEESCHHHHHHHHH----TTC-SEEEETTTSCHHHHHHH
T ss_pred HHHHHHcCCCCCCEEEEECCCHHHHHHHHHHHH--CCCeEEEEeCCHHHHHHHHH----cCC-CEEEeCCCcCHHHHHHH
Confidence 345556677899999999999999999999994 68999999999999887765 562 21111111122111 11
Q ss_pred cCCCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 199 QLGEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 199 ~l~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
..+++|+||.+... ...++...+.|+|||+++.-.
T Consensus 229 ~~g~~d~vid~~g~-------~~~~~~~~~~l~~~G~iv~~G 263 (340)
T 3s2e_A 229 EIGGAHGVLVTAVS-------PKAFSQAIGMVRRGGTIALNG 263 (340)
T ss_dssp HHSSEEEEEESSCC-------HHHHHHHHHHEEEEEEEEECS
T ss_pred hCCCCCEEEEeCCC-------HHHHHHHHHHhccCCEEEEeC
Confidence 11379999876432 146778889999999998864
No 283
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=98.00 E-value=9.8e-06 Score=75.22 Aligned_cols=102 Identities=16% Similarity=0.187 Sum_probs=72.3
Q ss_pred HHHhcCCCCCCEEEEeccCCChhhHHHHHhhcCCCc-EEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEc-----ccc-
Q 042119 122 ILSENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTST-HFDNFDIDEAANDVARSIVASDAEFEGRMKFLTR-----DIM- 194 (286)
Q Consensus 122 ~l~~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~-~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~-----D~~- 194 (286)
++.+..+.++++||.+|+|++|+.++.+|+. .|+ +|+++|.+++..+++++ +|. +. .+... |..
T Consensus 163 al~~~~~~~g~~VlV~GaG~vG~~aiqlak~--~Ga~~Vi~~~~~~~~~~~a~~----lGa--~~-vi~~~~~~~~~~~~ 233 (356)
T 1pl8_A 163 ACRRGGVTLGHKVLVCGAGPIGMVTLLVAKA--MGAAQVVVTDLSATRLSKAKE----IGA--DL-VLQISKESPQEIAR 233 (356)
T ss_dssp HHHHHTCCTTCEEEEECCSHHHHHHHHHHHH--TTCSEEEEEESCHHHHHHHHH----TTC--SE-EEECSSCCHHHHHH
T ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHHH--cCCCEEEEECCCHHHHHHHHH----hCC--CE-EEcCcccccchHHH
Confidence 3345567899999999999999999999994 688 99999999998887765 562 21 12111 111
Q ss_pred chhh--cCCCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 195 EVKE--QLGEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 195 ~~~~--~l~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
.+.. . .+||+||.+.-. ...++...+.|+|||+++.-.
T Consensus 234 ~i~~~~~-~g~D~vid~~g~-------~~~~~~~~~~l~~~G~iv~~G 273 (356)
T 1pl8_A 234 KVEGQLG-CKPEVTIECTGA-------EASIQAGIYATRSGGTLVLVG 273 (356)
T ss_dssp HHHHHHT-SCCSEEEECSCC-------HHHHHHHHHHSCTTCEEEECS
T ss_pred HHHHHhC-CCCCEEEECCCC-------hHHHHHHHHHhcCCCEEEEEe
Confidence 1111 2 479999966431 135677889999999998764
No 284
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.00 E-value=1e-05 Score=73.79 Aligned_cols=76 Identities=13% Similarity=0.049 Sum_probs=60.1
Q ss_pred CCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhc-----CC
Q 042119 127 GVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQ-----LG 201 (286)
Q Consensus 127 ~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~-----l~ 201 (286)
.+.++..++|.+||.+|.|. .+++ .+++|+|+|+||+|++.|++ ++. ++++|+++|..++... ++
T Consensus 19 ~~~~gg~~VD~T~G~GGHS~-~il~---~~g~VigiD~Dp~Ai~~A~~-L~~-----~rv~lv~~~f~~l~~~L~~~g~~ 88 (285)
T 1wg8_A 19 AVRPGGVYVDATLGGAGHAR-GILE---RGGRVIGLDQDPEAVARAKG-LHL-----PGLTVVQGNFRHLKRHLAALGVE 88 (285)
T ss_dssp TCCTTCEEEETTCTTSHHHH-HHHH---TTCEEEEEESCHHHHHHHHH-TCC-----TTEEEEESCGGGHHHHHHHTTCS
T ss_pred CCCCCCEEEEeCCCCcHHHH-HHHH---CCCEEEEEeCCHHHHHHHHh-hcc-----CCEEEEECCcchHHHHHHHcCCC
Confidence 56788999999999877765 4555 27899999999999999998 532 4899999999887432 24
Q ss_pred Ccceeehhhhc
Q 042119 202 EYDCIFLAALV 212 (286)
Q Consensus 202 ~fD~V~~aalv 212 (286)
.||.|+++-.+
T Consensus 89 ~vDgIL~DLGv 99 (285)
T 1wg8_A 89 RVDGILADLGV 99 (285)
T ss_dssp CEEEEEEECSC
T ss_pred CcCEEEeCCcc
Confidence 69999876444
No 285
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=97.98 E-value=6.3e-06 Score=77.19 Aligned_cols=105 Identities=17% Similarity=0.220 Sum_probs=75.2
Q ss_pred HHHhcCCCCCCEEEEeccCCChhhHHHHHhhcCCCc-EEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhc-
Q 042119 122 ILSENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTST-HFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQ- 199 (286)
Q Consensus 122 ~l~~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~-~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~- 199 (286)
++.+..+.++++||.+|+|++|+.++.+|+. .|+ +|+++|.+++..+++++ +| ...-+.+...|..+....
T Consensus 174 ~l~~~~~~~g~~VlV~GaG~vG~~aiqlak~--~Ga~~Vi~~~~~~~~~~~a~~----lG-a~~vi~~~~~~~~~~i~~~ 246 (370)
T 4ej6_A 174 GVDLSGIKAGSTVAILGGGVIGLLTVQLARL--AGATTVILSTRQATKRRLAEE----VG-ATATVDPSAGDVVEAIAGP 246 (370)
T ss_dssp HHHHHTCCTTCEEEEECCSHHHHHHHHHHHH--TTCSEEEEECSCHHHHHHHHH----HT-CSEEECTTSSCHHHHHHST
T ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHHH--cCCCEEEEECCCHHHHHHHHH----cC-CCEEECCCCcCHHHHHHhh
Confidence 4455677899999999999999999999994 788 99999999999888776 46 221122222333222222
Q ss_pred --C--CCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 200 --L--GEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 200 --l--~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
+ ++||+||.+.-. ...++...+.|++||++++-.
T Consensus 247 ~~~~~gg~Dvvid~~G~-------~~~~~~~~~~l~~~G~vv~~G 284 (370)
T 4ej6_A 247 VGLVPGGVDVVIECAGV-------AETVKQSTRLAKAGGTVVILG 284 (370)
T ss_dssp TSSSTTCEEEEEECSCC-------HHHHHHHHHHEEEEEEEEECS
T ss_pred hhccCCCCCEEEECCCC-------HHHHHHHHHHhccCCEEEEEe
Confidence 1 369999965421 146778889999999998864
No 286
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=97.97 E-value=5.9e-06 Score=76.30 Aligned_cols=100 Identities=9% Similarity=0.043 Sum_probs=70.1
Q ss_pred CCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCe-EEEE-ccccchhhcCCCcc
Q 042119 127 GVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRM-KFLT-RDIMEVKEQLGEYD 204 (286)
Q Consensus 127 ~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i-~f~~-~D~~~~~~~l~~fD 204 (286)
.+ ++++||.+|+|++|+.++.+|+..++|++|+++|.+++..+++++ +|. +.+ .+.. .|..+....-.+||
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~----lGa--~~vi~~~~~~~~~~~~~~g~g~D 240 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALE----LGA--DYVSEMKDAESLINKLTDGLGAS 240 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHH----HTC--SEEECHHHHHHHHHHHHTTCCEE
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHH----hCC--CEEeccccchHHHHHhhcCCCcc
Confidence 66 899999999999999999999953348999999999999888776 462 211 1111 11111111112699
Q ss_pred eeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 205 CIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 205 ~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
+||.+.-. ...++...+.|+|||+++.-.
T Consensus 241 ~vid~~g~-------~~~~~~~~~~l~~~G~iv~~g 269 (344)
T 2h6e_A 241 IAIDLVGT-------EETTYNLGKLLAQEGAIILVG 269 (344)
T ss_dssp EEEESSCC-------HHHHHHHHHHEEEEEEEEECC
T ss_pred EEEECCCC-------hHHHHHHHHHhhcCCEEEEeC
Confidence 99966431 136778889999999998754
No 287
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=97.95 E-value=4.5e-06 Score=77.34 Aligned_cols=105 Identities=16% Similarity=0.123 Sum_probs=73.5
Q ss_pred HHHhcCCCCCCEEEEeccCCChhhHHHHHhhcCCCc-EEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhc-
Q 042119 122 ILSENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTST-HFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQ- 199 (286)
Q Consensus 122 ~l~~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~-~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~- 199 (286)
++.+..++++++||.+|+|++|+.++.+|+ ..|+ +|+++|.+++..+++++ +|. ..-+.....|..+....
T Consensus 158 al~~~~~~~g~~VlV~GaG~vG~~a~qla~--~~Ga~~Vi~~~~~~~~~~~~~~----lGa-~~vi~~~~~~~~~~v~~~ 230 (352)
T 3fpc_A 158 GAELANIKLGDTVCVIGIGPVGLMSVAGAN--HLGAGRIFAVGSRKHCCDIALE----YGA-TDIINYKNGDIVEQILKA 230 (352)
T ss_dssp HHHHTTCCTTCCEEEECCSHHHHHHHHHHH--TTTCSSEEEECCCHHHHHHHHH----HTC-CEEECGGGSCHHHHHHHH
T ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHH--HcCCcEEEEECCCHHHHHHHHH----hCC-ceEEcCCCcCHHHHHHHH
Confidence 445667789999999999999999999999 4788 89999999998888876 462 11111111222111111
Q ss_pred C--CCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 200 L--GEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 200 l--~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
. .+||+||.+.-. + ..++...+.|+|||+++.-.
T Consensus 231 t~g~g~D~v~d~~g~-----~--~~~~~~~~~l~~~G~~v~~G 266 (352)
T 3fpc_A 231 TDGKGVDKVVIAGGD-----V--HTFAQAVKMIKPGSDIGNVN 266 (352)
T ss_dssp TTTCCEEEEEECSSC-----T--THHHHHHHHEEEEEEEEECC
T ss_pred cCCCCCCEEEECCCC-----h--HHHHHHHHHHhcCCEEEEec
Confidence 1 269999965421 1 36778889999999998865
No 288
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=97.94 E-value=1.3e-05 Score=73.97 Aligned_cols=100 Identities=21% Similarity=0.166 Sum_probs=74.8
Q ss_pred HHHHHhcCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhc
Q 042119 120 YTILSENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQ 199 (286)
Q Consensus 120 ~~~l~~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~ 199 (286)
+.++.+..+.++++||.+|+|++|+.++.+|+. .|++|+++|.+++..+++++ +|. +. .+ .|...+.
T Consensus 166 ~~~l~~~~~~~g~~VlV~GaG~vG~~a~qla~~--~Ga~Vi~~~~~~~~~~~~~~----lGa--~~-v~--~~~~~~~-- 232 (348)
T 3two_A 166 YSPLKFSKVTKGTKVGVAGFGGLGSMAVKYAVA--MGAEVSVFARNEHKKQDALS----MGV--KH-FY--TDPKQCK-- 232 (348)
T ss_dssp HHHHHHTTCCTTCEEEEESCSHHHHHHHHHHHH--TTCEEEEECSSSTTHHHHHH----TTC--SE-EE--SSGGGCC--
T ss_pred HHHHHhcCCCCCCEEEEECCcHHHHHHHHHHHH--CCCeEEEEeCCHHHHHHHHh----cCC--Ce-ec--CCHHHHh--
Confidence 345556677899999999999999999999994 68999999999999887765 662 22 22 4432222
Q ss_pred CCCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 200 LGEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 200 l~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
.++|+||.+.-. . ..++...+.|+|||+++.-.
T Consensus 233 -~~~D~vid~~g~--~-----~~~~~~~~~l~~~G~iv~~G 265 (348)
T 3two_A 233 -EELDFIISTIPT--H-----YDLKDYLKLLTYNGDLALVG 265 (348)
T ss_dssp -SCEEEEEECCCS--C-----CCHHHHHTTEEEEEEEEECC
T ss_pred -cCCCEEEECCCc--H-----HHHHHHHHHHhcCCEEEEEC
Confidence 279999965421 1 25667888999999999875
No 289
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=97.91 E-value=3.1e-05 Score=71.87 Aligned_cols=104 Identities=23% Similarity=0.225 Sum_probs=75.2
Q ss_pred HHHhcCCCCCCEEEEeccCCChhhHHHHHhhcCCCcE-EEEEeCChHHHHHHHHHHHhcCCCCCCeEEEE-----ccccc
Q 042119 122 ILSENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTH-FDNFDIDEAANDVARSIVASDAEFEGRMKFLT-----RDIME 195 (286)
Q Consensus 122 ~l~~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~-V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~-----~D~~~ 195 (286)
++.+..+.++++||.+|+|++|+.++.+|+. .|++ |+++|.+++..++++++ . . .-+.+.. .|..+
T Consensus 171 ~l~~~~~~~g~~VlV~GaG~vG~~aiqlak~--~Ga~~Vi~~~~~~~~~~~a~~l-~-~----~~~~~~~~~~~~~~~~~ 242 (363)
T 3m6i_A 171 GLQRAGVRLGDPVLICGAGPIGLITMLCAKA--AGACPLVITDIDEGRLKFAKEI-C-P----EVVTHKVERLSAEESAK 242 (363)
T ss_dssp HHHHHTCCTTCCEEEECCSHHHHHHHHHHHH--TTCCSEEEEESCHHHHHHHHHH-C-T----TCEEEECCSCCHHHHHH
T ss_pred HHHHcCCCCCCEEEEECCCHHHHHHHHHHHH--cCCCEEEEECCCHHHHHHHHHh-c-h----hcccccccccchHHHHH
Confidence 4455677899999999999999999999994 7887 99999999999999986 2 1 2234331 12211
Q ss_pred -hhhc--CCCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 196 -VKEQ--LGEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 196 -~~~~--l~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
+... -.++|+||.+.-. + ..++...+.|++||++++-.
T Consensus 243 ~v~~~t~g~g~Dvvid~~g~-----~--~~~~~~~~~l~~~G~iv~~G 283 (363)
T 3m6i_A 243 KIVESFGGIEPAVALECTGV-----E--SSIAAAIWAVKFGGKVFVIG 283 (363)
T ss_dssp HHHHHTSSCCCSEEEECSCC-----H--HHHHHHHHHSCTTCEEEECC
T ss_pred HHHHHhCCCCCCEEEECCCC-----h--HHHHHHHHHhcCCCEEEEEc
Confidence 1111 1369999965421 1 36778889999999998864
No 290
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=97.88 E-value=8.2e-06 Score=76.81 Aligned_cols=111 Identities=19% Similarity=0.185 Sum_probs=74.2
Q ss_pred HHHhcCCCCCCEEEEeccCCChhhHHHHHhhcCCCc-EEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEcc-ccc-hhh
Q 042119 122 ILSENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTST-HFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRD-IME-VKE 198 (286)
Q Consensus 122 ~l~~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~-~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D-~~~-~~~ 198 (286)
++.+..++++++||.+|+|++|+.++.+|+. .|+ +|+++|.+++..+++++ +| . +-+.+...| ..+ +..
T Consensus 177 al~~~~~~~g~~VlV~GaG~vG~~aiqlAk~--~Ga~~Vi~~~~~~~~~~~a~~----lG-a-~~i~~~~~~~~~~~v~~ 248 (398)
T 1kol_A 177 GAVTAGVGPGSTVYVAGAGPVGLAAAASARL--LGAAVVIVGDLNPARLAHAKA----QG-F-EIADLSLDTPLHEQIAA 248 (398)
T ss_dssp HHHHTTCCTTCEEEEECCSHHHHHHHHHHHH--TTCSEEEEEESCHHHHHHHHH----TT-C-EEEETTSSSCHHHHHHH
T ss_pred HHHHcCCCCCCEEEEECCcHHHHHHHHHHHH--CCCCeEEEEcCCHHHHHHHHH----cC-C-cEEccCCcchHHHHHHH
Confidence 3445567899999999999999999999994 677 79999999999888865 57 2 212211111 111 111
Q ss_pred --cCCCcceeehhhhcc--------CChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 199 --QLGEYDCIFLAALVG--------MSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 199 --~l~~fD~V~~aalvg--------~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
.-.++|+||.+.-.. +..+.+...++...+.|++||++++-.
T Consensus 249 ~t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G 300 (398)
T 1kol_A 249 LLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPG 300 (398)
T ss_dssp HHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECS
T ss_pred HhCCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEec
Confidence 113699999654310 000112346788899999999998754
No 291
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=97.87 E-value=4.2e-05 Score=75.73 Aligned_cols=129 Identities=12% Similarity=0.105 Sum_probs=86.0
Q ss_pred hhhhHHHHHHHHhcC-CCCCCEEEEeccCCChhhHHHHHhhc--CCCcEEEEEeCChHHHHHHHHHHHhcCCCC-CCeEE
Q 042119 113 VKLSKLEYTILSENG-VVQPKKVAFVGSGPMPLTSIIMAKHH--LTSTHFDNFDIDEAANDVARSIVASDAEFE-GRMKF 188 (286)
Q Consensus 113 ~~l~~~E~~~l~~~~-~~~~~~VL~IG~G~lp~tai~lA~~~--~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~-~~i~f 188 (286)
..+++.=...+.... +.++.+|+|.+||++++.... +++. ....+++|+|+++.+.++|+.++.-.| +. +++++
T Consensus 203 ~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a-~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~g-i~~~~~~I 280 (542)
T 3lkd_A 203 QPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNA-KRYSRQPQTVVYFGQELNTSTYNLARMNMILHG-VPIENQFL 280 (542)
T ss_dssp HHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGH-HHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTT-CCGGGEEE
T ss_pred HHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHH-HHHHHhccCceEEEEECcHHHHHHHHHHHHHcC-CCcCccce
Confidence 334544444442211 357789999999998775433 3321 236899999999999999999988778 44 47899
Q ss_pred EEccccch--hh-cCCCcceeehhhh--ccC------------------Chh--HHHHHHHHHHhhcc-CCcEEEEeecC
Q 042119 189 LTRDIMEV--KE-QLGEYDCIFLAAL--VGM------------------SKE--EKLTILGHIRKYMK-DGGILLVRSAK 242 (286)
Q Consensus 189 ~~~D~~~~--~~-~l~~fD~V~~aal--vg~------------------~~~--~k~~vl~~l~~~l~-pgg~lv~r~~~ 242 (286)
.++|.... +. ....||+|+..-- ..+ +.. .-..+++++.+.|+ |||++.+-.++
T Consensus 281 ~~gDtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~ 360 (542)
T 3lkd_A 281 HNADTLDEDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPH 360 (542)
T ss_dssp EESCTTTSCSCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEET
T ss_pred EecceecccccccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEecc
Confidence 99998654 21 2347999974310 000 000 01248999999999 99998776655
Q ss_pred c
Q 042119 243 G 243 (286)
Q Consensus 243 g 243 (286)
|
T Consensus 361 g 361 (542)
T 3lkd_A 361 G 361 (542)
T ss_dssp H
T ss_pred h
Confidence 4
No 292
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=97.87 E-value=1.2e-05 Score=75.07 Aligned_cols=103 Identities=17% Similarity=0.132 Sum_probs=71.9
Q ss_pred HhcCCCCCCEEEEeccCCChhhHHHHHhhcCCCc-EEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcC--
Q 042119 124 SENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTST-HFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQL-- 200 (286)
Q Consensus 124 ~~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~-~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l-- 200 (286)
.+..++++++||.+|+|++|+.++.+|+. .|+ +|+++|.+++..+++++ +|. ..-+.....|..+....+
T Consensus 184 ~~~~~~~g~~VlV~GaG~vG~~a~qlak~--~Ga~~Vi~~~~~~~~~~~a~~----lGa-~~vi~~~~~~~~~~~~~~~~ 256 (371)
T 1f8f_A 184 NALKVTPASSFVTWGAGAVGLSALLAAKV--CGASIIIAVDIVESRLELAKQ----LGA-THVINSKTQDPVAAIKEITD 256 (371)
T ss_dssp TTTCCCTTCEEEEESCSHHHHHHHHHHHH--HTCSEEEEEESCHHHHHHHHH----HTC-SEEEETTTSCHHHHHHHHTT
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHH--cCCCeEEEECCCHHHHHHHHH----cCC-CEEecCCccCHHHHHHHhcC
Confidence 34567899999999999999999999994 677 79999999999888876 462 111111111221111111
Q ss_pred CCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 201 GEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 201 ~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
++||+||.+.-. ...++...+.|+|||++++-.
T Consensus 257 gg~D~vid~~g~-------~~~~~~~~~~l~~~G~iv~~G 289 (371)
T 1f8f_A 257 GGVNFALESTGS-------PEILKQGVDALGILGKIAVVG 289 (371)
T ss_dssp SCEEEEEECSCC-------HHHHHHHHHTEEEEEEEEECC
T ss_pred CCCcEEEECCCC-------HHHHHHHHHHHhcCCEEEEeC
Confidence 269999965421 146788899999999998864
No 293
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=97.85 E-value=9.4e-06 Score=76.02 Aligned_cols=103 Identities=19% Similarity=0.247 Sum_probs=73.1
Q ss_pred HHHHhcCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcC
Q 042119 121 TILSENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQL 200 (286)
Q Consensus 121 ~~l~~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l 200 (286)
.++.+..++++++||.+|+|++|+.++.+|+. .|++|+++|.+++..+.+++ +|. +.+ +-..+ .+....+
T Consensus 185 ~al~~~~~~~g~~VlV~GaG~vG~~aiqlak~--~Ga~Vi~~~~~~~~~~~a~~----lGa--~~v-i~~~~-~~~~~~~ 254 (369)
T 1uuf_A 185 SPLRHWQAGPGKKVGVVGIGGLGHMGIKLAHA--MGAHVVAFTTSEAKREAAKA----LGA--DEV-VNSRN-ADEMAAH 254 (369)
T ss_dssp HHHHHTTCCTTCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESSGGGHHHHHH----HTC--SEE-EETTC-HHHHHTT
T ss_pred HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHH----cCC--cEE-ecccc-HHHHHHh
Confidence 34555567899999999999999999999994 68999999999999888876 562 211 21111 1111122
Q ss_pred -CCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 201 -GEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 201 -~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
.+||+||.+.-. . ..++...+.|+|||+++.-.
T Consensus 255 ~~g~Dvvid~~g~--~-----~~~~~~~~~l~~~G~iv~~G 288 (369)
T 1uuf_A 255 LKSFDFILNTVAA--P-----HNLDDFTTLLKRDGTMTLVG 288 (369)
T ss_dssp TTCEEEEEECCSS--C-----CCHHHHHTTEEEEEEEEECC
T ss_pred hcCCCEEEECCCC--H-----HHHHHHHHHhccCCEEEEec
Confidence 479999965432 1 24566788999999998754
No 294
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=97.85 E-value=2e-05 Score=72.57 Aligned_cols=105 Identities=16% Similarity=0.215 Sum_probs=72.9
Q ss_pred HHHHhcCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCe-EEEEccccchhhc
Q 042119 121 TILSENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRM-KFLTRDIMEVKEQ 199 (286)
Q Consensus 121 ~~l~~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i-~f~~~D~~~~~~~ 199 (286)
.++.+..+.++++||.+|+|++|+.++.+|+. .|++|+++|.+++..+.+++ +|. +.+ .+...|..+....
T Consensus 155 ~~l~~~~~~~g~~VlV~GaG~vG~~~~~~a~~--~Ga~Vi~~~~~~~~~~~~~~----lGa--~~~~d~~~~~~~~~~~~ 226 (339)
T 1rjw_A 155 KALKVTGAKPGEWVAIYGIGGLGHVAVQYAKA--MGLNVVAVDIGDEKLELAKE----LGA--DLVVNPLKEDAAKFMKE 226 (339)
T ss_dssp HHHHHHTCCTTCEEEEECCSTTHHHHHHHHHH--TTCEEEEECSCHHHHHHHHH----TTC--SEEECTTTSCHHHHHHH
T ss_pred HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHH--cCCEEEEEeCCHHHHHHHHH----CCC--CEEecCCCccHHHHHHH
Confidence 34445567899999999999999999999994 68999999999999888764 562 211 1100111111111
Q ss_pred -CCCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 200 -LGEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 200 -l~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
.+++|+||.++.. ...++...+.|++||+++.-.
T Consensus 227 ~~~~~d~vid~~g~-------~~~~~~~~~~l~~~G~~v~~g 261 (339)
T 1rjw_A 227 KVGGVHAAVVTAVS-------KPAFQSAYNSIRRGGACVLVG 261 (339)
T ss_dssp HHSSEEEEEESSCC-------HHHHHHHHHHEEEEEEEEECC
T ss_pred HhCCCCEEEECCCC-------HHHHHHHHHHhhcCCEEEEec
Confidence 1479999866431 136778889999999998764
No 295
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=97.83 E-value=6.2e-06 Score=77.83 Aligned_cols=109 Identities=16% Similarity=0.122 Sum_probs=73.5
Q ss_pred HHHhcCCCCCCEEEEeccCCChhhHHHHHhhcCCCc-EEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccc-cchhh-
Q 042119 122 ILSENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTST-HFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDI-MEVKE- 198 (286)
Q Consensus 122 ~l~~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~-~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~-~~~~~- 198 (286)
++.+..++++++||.+|+|++|+.++.+|+. .|+ +|+++|.+++..+++++ +| . +-+.+...|. .+...
T Consensus 177 al~~~~~~~g~~VlV~GaG~vG~~aiqlak~--~Ga~~Vi~~~~~~~~~~~a~~----lG-a-~~i~~~~~~~~~~~~~~ 248 (398)
T 2dph_A 177 GCVSAGVKPGSHVYIAGAGPVGRCAAAGARL--LGAACVIVGDQNPERLKLLSD----AG-F-ETIDLRNSAPLRDQIDQ 248 (398)
T ss_dssp HHHHTTCCTTCEEEEECCSHHHHHHHHHHHH--HTCSEEEEEESCHHHHHHHHT----TT-C-EEEETTSSSCHHHHHHH
T ss_pred HHHHcCCCCCCEEEEECCCHHHHHHHHHHHH--cCCCEEEEEcCCHHHHHHHHH----cC-C-cEEcCCCcchHHHHHHH
Confidence 3445567899999999999999999999994 578 99999999999887764 57 2 2222211221 11111
Q ss_pred --cCCCcceeehhhhccCCh---------hHHHHHHHHHHhhccCCcEEEEee
Q 042119 199 --QLGEYDCIFLAALVGMSK---------EEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 199 --~l~~fD~V~~aalvg~~~---------~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
.-.+||+||.+.-. .. .+....++...+.|+|||++++-.
T Consensus 249 ~~~g~g~Dvvid~~g~--~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G 299 (398)
T 2dph_A 249 ILGKPEVDCGVDAVGF--EAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPG 299 (398)
T ss_dssp HHSSSCEEEEEECSCT--TCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCS
T ss_pred HhCCCCCCEEEECCCC--ccccccccccccccHHHHHHHHHHHhcCCEEEEec
Confidence 11269999966431 10 001236788899999999998754
No 296
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=97.83 E-value=5.3e-05 Score=70.07 Aligned_cols=103 Identities=16% Similarity=0.150 Sum_probs=72.7
Q ss_pred HHHhcCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEc---ccc-chh
Q 042119 122 ILSENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTR---DIM-EVK 197 (286)
Q Consensus 122 ~l~~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~---D~~-~~~ 197 (286)
++.+..+.++++||.+|+|++|+.++.+|+. .|++|+++|.+++..+++++ +|. + ..+... |.. ++.
T Consensus 160 al~~~~~~~g~~VlV~GaG~vG~~a~qla~~--~Ga~Vi~~~~~~~~~~~~~~----lGa--~-~~~~~~~~~~~~~~i~ 230 (352)
T 1e3j_A 160 ACRRAGVQLGTTVLVIGAGPIGLVSVLAAKA--YGAFVVCTARSPRRLEVAKN----CGA--D-VTLVVDPAKEEESSII 230 (352)
T ss_dssp HHHHHTCCTTCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHH----TTC--S-EEEECCTTTSCHHHHH
T ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHHH--cCCEEEEEcCCHHHHHHHHH----hCC--C-EEEcCcccccHHHHHH
Confidence 3445567899999999999999999999994 68999999999999888764 562 2 122211 211 111
Q ss_pred hc-----CCCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 198 EQ-----LGEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 198 ~~-----l~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
.. -.++|+||.+.-. ...++...+.|+|||+++.-.
T Consensus 231 ~~~~~~~g~g~D~vid~~g~-------~~~~~~~~~~l~~~G~iv~~G 271 (352)
T 1e3j_A 231 ERIRSAIGDLPNVTIDCSGN-------EKCITIGINITRTGGTLMLVG 271 (352)
T ss_dssp HHHHHHSSSCCSEEEECSCC-------HHHHHHHHHHSCTTCEEEECS
T ss_pred HHhccccCCCCCEEEECCCC-------HHHHHHHHHHHhcCCEEEEEe
Confidence 11 1369999966421 135677888999999998764
No 297
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=97.80 E-value=3e-05 Score=71.22 Aligned_cols=106 Identities=12% Similarity=0.120 Sum_probs=74.9
Q ss_pred HHHhcCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcC-
Q 042119 122 ILSENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQL- 200 (286)
Q Consensus 122 ~l~~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l- 200 (286)
.+...+.+++++||.+|+|++|..++.+|+ ...|++|+++|.+++..+++++ +| ...-+.+...|..+....+
T Consensus 155 ~l~~~~~~~g~~VlV~GaG~~g~~a~~~a~-~~~g~~Vi~~~~~~~r~~~~~~----~G-a~~~i~~~~~~~~~~v~~~t 228 (348)
T 4eez_A 155 AIKVSGVKPGDWQVIFGAGGLGNLAIQYAK-NVFGAKVIAVDINQDKLNLAKK----IG-ADVTINSGDVNPVDEIKKIT 228 (348)
T ss_dssp HHHHHTCCTTCEEEEECCSHHHHHHHHHHH-HTSCCEEEEEESCHHHHHHHHH----TT-CSEEEEC-CCCHHHHHHHHT
T ss_pred eecccCCCCCCEEEEEcCCCccHHHHHHHH-HhCCCEEEEEECcHHHhhhhhh----cC-CeEEEeCCCCCHHHHhhhhc
Confidence 455567789999999999999999998888 4678999999999998877665 56 2223344334433222221
Q ss_pred --CCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 201 --GEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 201 --~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
.++|.++.++.- ...+....+.+++||++++-.
T Consensus 229 ~g~g~d~~~~~~~~-------~~~~~~~~~~l~~~G~~v~~g 263 (348)
T 4eez_A 229 GGLGVQSAIVCAVA-------RIAFEQAVASLKPMGKMVAVA 263 (348)
T ss_dssp TSSCEEEEEECCSC-------HHHHHHHHHTEEEEEEEEECC
T ss_pred CCCCceEEEEeccC-------cchhheeheeecCCceEEEEe
Confidence 257888766432 136777888999999998865
No 298
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=97.78 E-value=1.6e-05 Score=78.83 Aligned_cols=110 Identities=9% Similarity=-0.018 Sum_probs=75.5
Q ss_pred CEEEEeccCCChhhHHHHHhhc---C-----------CCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchh
Q 042119 132 KKVAFVGSGPMPLTSIIMAKHH---L-----------TSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVK 197 (286)
Q Consensus 132 ~~VL~IG~G~lp~tai~lA~~~---~-----------~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~ 197 (286)
.+|+|.+||++++.... ++.. . ...+++|+|+++.++++|+.++.-.| +..++.+.++|....+
T Consensus 246 ~~VlDPaCGSG~fLi~a-~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~g-i~~~i~i~~gDtL~~~ 323 (544)
T 3khk_A 246 GRVYDPAMGSGGFFVSS-DKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRG-IDFNFGKKNADSFLDD 323 (544)
T ss_dssp EEEEESSCTTCHHHHHH-HHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTT-CCCBCCSSSCCTTTSC
T ss_pred CeEeCcccCcCcHHHHH-HHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhC-CCcccceeccchhcCc
Confidence 49999999988765432 2210 0 15789999999999999999988888 5666666899986533
Q ss_pred hc-CCCcceeehhhhcc---C-----------------------Chh--HHHHHHHHHHhhccCCcEEEEeecCc
Q 042119 198 EQ-LGEYDCIFLAALVG---M-----------------------SKE--EKLTILGHIRKYMKDGGILLVRSAKG 243 (286)
Q Consensus 198 ~~-l~~fD~V~~aalvg---~-----------------------~~~--~k~~vl~~l~~~l~pgg~lv~r~~~g 243 (286)
.. ...||+|+..---+ + +.. .-..+++++.+.|+|||++.+-.++|
T Consensus 324 ~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP~g 398 (544)
T 3khk_A 324 QHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLANG 398 (544)
T ss_dssp SCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEETH
T ss_pred ccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEecch
Confidence 22 24799997531111 1 000 01258999999999999987765444
No 299
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=97.76 E-value=2e-05 Score=72.64 Aligned_cols=108 Identities=13% Similarity=0.164 Sum_probs=74.9
Q ss_pred HHHHHhc--CCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchh
Q 042119 120 YTILSEN--GVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVK 197 (286)
Q Consensus 120 ~~~l~~~--~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~ 197 (286)
+.++.+. .+.++++||.+|+|++|+.++.+|+. ..+++|+++|.+++..+++++ +|. ..-+.. ..|..+..
T Consensus 159 ~~~l~~~~~~~~~g~~vlv~GaG~vG~~a~qla~~-~g~~~Vi~~~~~~~~~~~~~~----lGa-~~~i~~-~~~~~~~v 231 (345)
T 3jv7_A 159 YHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRA-VSAARVIAVDLDDDRLALARE----VGA-DAAVKS-GAGAADAI 231 (345)
T ss_dssp HHHHHTTGGGCCTTCEEEEECCSHHHHHHHHHHHH-HCCCEEEEEESCHHHHHHHHH----TTC-SEEEEC-STTHHHHH
T ss_pred HHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHH-cCCCEEEEEcCCHHHHHHHHH----cCC-CEEEcC-CCcHHHHH
Confidence 3345453 56889999999999999999999994 448999999999999888765 562 211111 11211111
Q ss_pred hcC---CCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEeec
Q 042119 198 EQL---GEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRSA 241 (286)
Q Consensus 198 ~~l---~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~~ 241 (286)
..+ .++|+||.+.-- ...++...+.|+|||+++.-..
T Consensus 232 ~~~t~g~g~d~v~d~~G~-------~~~~~~~~~~l~~~G~iv~~G~ 271 (345)
T 3jv7_A 232 RELTGGQGATAVFDFVGA-------QSTIDTAQQVVAVDGHISVVGI 271 (345)
T ss_dssp HHHHGGGCEEEEEESSCC-------HHHHHHHHHHEEEEEEEEECSC
T ss_pred HHHhCCCCCeEEEECCCC-------HHHHHHHHHHHhcCCEEEEECC
Confidence 111 279999965421 1367888999999999998753
No 300
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=97.75 E-value=2e-05 Score=73.91 Aligned_cols=103 Identities=18% Similarity=0.184 Sum_probs=72.6
Q ss_pred HHHhcC-CCCCCEEEEeccCCChhhHHHHHhhcCCC-cEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEc------cc
Q 042119 122 ILSENG-VVQPKKVAFVGSGPMPLTSIIMAKHHLTS-THFDNFDIDEAANDVARSIVASDAEFEGRMKFLTR------DI 193 (286)
Q Consensus 122 ~l~~~~-~~~~~~VL~IG~G~lp~tai~lA~~~~~g-~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~------D~ 193 (286)
++.+.. +.++++||.+|+|++|+.++.+|+. .| ++|+++|.+++..+.+++ +|. +. ++.. |.
T Consensus 186 al~~~~~~~~g~~VlV~GaG~vG~~aiqlak~--~Ga~~Vi~~~~~~~~~~~~~~----lGa--~~--vi~~~~~~~~~~ 255 (380)
T 1vj0_A 186 AFDEYPESFAGKTVVIQGAGPLGLFGVVIARS--LGAENVIVIAGSPNRLKLAEE----IGA--DL--TLNRRETSVEER 255 (380)
T ss_dssp HHHTCSSCCBTCEEEEECCSHHHHHHHHHHHH--TTBSEEEEEESCHHHHHHHHH----TTC--SE--EEETTTSCHHHH
T ss_pred HHHhcCCCCCCCEEEEECcCHHHHHHHHHHHH--cCCceEEEEcCCHHHHHHHHH----cCC--cE--EEeccccCcchH
Confidence 444556 7889999999999999999999994 68 599999999999888764 562 21 2221 11
Q ss_pred cc-hhhcC--CCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEeec
Q 042119 194 ME-VKEQL--GEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRSA 241 (286)
Q Consensus 194 ~~-~~~~l--~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~~ 241 (286)
.+ +.... .++|+||.+.-. . ..++...+.|+|||+++.-..
T Consensus 256 ~~~v~~~~~g~g~Dvvid~~g~--~-----~~~~~~~~~l~~~G~iv~~G~ 299 (380)
T 1vj0_A 256 RKAIMDITHGRGADFILEATGD--S-----RALLEGSELLRRGGFYSVAGV 299 (380)
T ss_dssp HHHHHHHTTTSCEEEEEECSSC--T-----THHHHHHHHEEEEEEEEECCC
T ss_pred HHHHHHHhCCCCCcEEEECCCC--H-----HHHHHHHHHHhcCCEEEEEec
Confidence 11 11111 269999966432 1 256778899999999988653
No 301
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=97.72 E-value=1.8e-05 Score=74.75 Aligned_cols=103 Identities=18% Similarity=0.215 Sum_probs=70.0
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeeh
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFL 208 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~ 208 (286)
-++++|+.+|+|++|..+..+++. .|++|+++|++++..+.+++. .| ..+.....+..++...+.++|+|+.
T Consensus 166 l~g~~V~ViG~G~iG~~~a~~a~~--~Ga~V~~~d~~~~~l~~~~~~---~g---~~~~~~~~~~~~l~~~l~~aDvVi~ 237 (377)
T 2vhw_A 166 VEPADVVVIGAGTAGYNAARIANG--MGATVTVLDINIDKLRQLDAE---FC---GRIHTRYSSAYELEGAVKRADLVIG 237 (377)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHH---TT---TSSEEEECCHHHHHHHHHHCSEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHh--CCCEEEEEeCCHHHHHHHHHh---cC---CeeEeccCCHHHHHHHHcCCCEEEE
Confidence 468999999999999999988884 788999999999988777654 34 2332322222223333346899998
Q ss_pred hhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 209 AALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 209 aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
+..+... +.+.-+.+...+.|+|||+++.-.
T Consensus 238 ~~~~p~~-~t~~li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 238 AVLVPGA-KAPKLVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp CCCCTTS-CCCCCBCHHHHTTSCTTCEEEEGG
T ss_pred CCCcCCC-CCcceecHHHHhcCCCCcEEEEEe
Confidence 6554221 111112456778899999988765
No 302
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=97.69 E-value=1.8e-05 Score=73.73 Aligned_cols=99 Identities=20% Similarity=0.095 Sum_probs=71.4
Q ss_pred hcCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhh------
Q 042119 125 ENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKE------ 198 (286)
Q Consensus 125 ~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~------ 198 (286)
...++++++||.+|+|++|+.++.+|+. .|++|+++|.+++..+++++ +|. + ..+. .+..++..
T Consensus 184 ~~~~~~g~~VlV~G~G~vG~~a~qla~~--~Ga~Vi~~~~~~~~~~~~~~----lGa--~-~vi~-~~~~~~~~~v~~~~ 253 (363)
T 3uog_A 184 KGHLRAGDRVVVQGTGGVALFGLQIAKA--TGAEVIVTSSSREKLDRAFA----LGA--D-HGIN-RLEEDWVERVYALT 253 (363)
T ss_dssp TTCCCTTCEEEEESSBHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHH----HTC--S-EEEE-TTTSCHHHHHHHHH
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHH--cCCEEEEEecCchhHHHHHH----cCC--C-EEEc-CCcccHHHHHHHHh
Confidence 4456899999999999999999999994 78999999999999888766 462 2 1122 22111111
Q ss_pred cCCCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEeec
Q 042119 199 QLGEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRSA 241 (286)
Q Consensus 199 ~l~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~~ 241 (286)
.-.++|+||.++- + ..++...+.|+|||++++-..
T Consensus 254 ~g~g~D~vid~~g-~-------~~~~~~~~~l~~~G~iv~~G~ 288 (363)
T 3uog_A 254 GDRGADHILEIAG-G-------AGLGQSLKAVAPDGRISVIGV 288 (363)
T ss_dssp TTCCEEEEEEETT-S-------SCHHHHHHHEEEEEEEEEECC
T ss_pred CCCCceEEEECCC-h-------HHHHHHHHHhhcCCEEEEEec
Confidence 1126999996643 1 246678889999999988753
No 303
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=97.68 E-value=3.4e-05 Score=71.69 Aligned_cols=105 Identities=16% Similarity=0.164 Sum_probs=72.3
Q ss_pred HHHHhcCCC-CCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhc
Q 042119 121 TILSENGVV-QPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQ 199 (286)
Q Consensus 121 ~~l~~~~~~-~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~ 199 (286)
.++.+.... ++++||.+|+|++|+.++.+|+. .|++|+++|.+++..+.+++ ++|. +.+ +...|...+...
T Consensus 170 ~~l~~~~~~~~g~~VlV~GaG~vG~~a~qlak~--~Ga~Vi~~~~~~~~~~~~~~---~lGa--~~v-i~~~~~~~~~~~ 241 (357)
T 2cf5_A 170 SPLSHFGLKQPGLRGGILGLGGVGHMGVKIAKA--MGHHVTVISSSNKKREEALQ---DLGA--DDY-VIGSDQAKMSEL 241 (357)
T ss_dssp HHHHHTSTTSTTCEEEEECCSHHHHHHHHHHHH--HTCEEEEEESSTTHHHHHHT---TSCC--SCE-EETTCHHHHHHS
T ss_pred HHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHH--CCCeEEEEeCChHHHHHHHH---HcCC--cee-eccccHHHHHHh
Confidence 344455667 89999999999999999999994 68999999999988777652 3662 222 222221112222
Q ss_pred CCCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 200 LGEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 200 l~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
.+++|+||.+.-. . ..++...+.|+|||+++.-.
T Consensus 242 ~~g~D~vid~~g~--~-----~~~~~~~~~l~~~G~iv~~G 275 (357)
T 2cf5_A 242 ADSLDYVIDTVPV--H-----HALEPYLSLLKLDGKLILMG 275 (357)
T ss_dssp TTTEEEEEECCCS--C-----CCSHHHHTTEEEEEEEEECS
T ss_pred cCCCCEEEECCCC--h-----HHHHHHHHHhccCCEEEEeC
Confidence 2479999965431 1 13456778999999998864
No 304
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=97.67 E-value=9.7e-06 Score=75.38 Aligned_cols=106 Identities=21% Similarity=0.169 Sum_probs=73.0
Q ss_pred HHHHhcCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcC
Q 042119 121 TILSENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQL 200 (286)
Q Consensus 121 ~~l~~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l 200 (286)
.++.+..+.++++||.+|+|++|+.++.+|+. .|++|+++|.+++..+.+++ +|. +. .+-..+..++...+
T Consensus 170 ~~l~~~~~~~g~~VlV~GaG~vG~~~~qlak~--~Ga~Vi~~~~~~~~~~~~~~----lGa--~~-v~~~~~~~~~~~~~ 240 (360)
T 1piw_A 170 SPLVRNGCGPGKKVGIVGLGGIGSMGTLISKA--MGAETYVISRSSRKREDAMK----MGA--DH-YIATLEEGDWGEKY 240 (360)
T ss_dssp HHHHHTTCSTTCEEEEECCSHHHHHHHHHHHH--HTCEEEEEESSSTTHHHHHH----HTC--SE-EEEGGGTSCHHHHS
T ss_pred HHHHHcCCCCCCEEEEECCCHHHHHHHHHHHH--CCCEEEEEcCCHHHHHHHHH----cCC--CE-EEcCcCchHHHHHh
Confidence 44555667899999999999999999999994 68999999999999888776 462 21 12111110222222
Q ss_pred -CCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 201 -GEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 201 -~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
++||+||.+.-.. + ...++...+.|+|||+++.-.
T Consensus 241 ~~~~D~vid~~g~~-~----~~~~~~~~~~l~~~G~iv~~g 276 (360)
T 1piw_A 241 FDTFDLIVVCASSL-T----DIDFNIMPKAMKVGGRIVSIS 276 (360)
T ss_dssp CSCEEEEEECCSCS-T----TCCTTTGGGGEEEEEEEEECC
T ss_pred hcCCCEEEECCCCC-c----HHHHHHHHHHhcCCCEEEEec
Confidence 4799999654310 0 124556788999999998765
No 305
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=97.67 E-value=4.5e-05 Score=71.17 Aligned_cols=100 Identities=20% Similarity=0.139 Sum_probs=70.8
Q ss_pred hcCCCCCCEEEEeccCCChhhHHHHHhhcCCCc-EEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEc----cccchhhc
Q 042119 125 ENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTST-HFDNFDIDEAANDVARSIVASDAEFEGRMKFLTR----DIMEVKEQ 199 (286)
Q Consensus 125 ~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~-~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~----D~~~~~~~ 199 (286)
...+.++++||.+|+|++|+.++.+|+. .|+ +|+++|.+++..+.+++ +|. +. .+... |..+....
T Consensus 190 ~~~~~~g~~VlV~GaG~vG~~aiqlak~--~Ga~~Vi~~~~~~~~~~~a~~----lGa--~~-vi~~~~~~~~~~~~v~~ 260 (376)
T 1e3i_A 190 TAKVTPGSTCAVFGLGCVGLSAIIGCKI--AGASRIIAIDINGEKFPKAKA----LGA--TD-CLNPRELDKPVQDVITE 260 (376)
T ss_dssp TSCCCTTCEEEEECCSHHHHHHHHHHHH--TTCSEEEEECSCGGGHHHHHH----TTC--SE-EECGGGCSSCHHHHHHH
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHH--cCCCeEEEEcCCHHHHHHHHH----hCC--cE-EEccccccchHHHHHHH
Confidence 3456889999999999999999999994 688 89999999999887765 562 21 12111 11111111
Q ss_pred --CCCcceeehhhhccCChhHHHHHHHHHHhhccCC-cEEEEee
Q 042119 200 --LGEYDCIFLAALVGMSKEEKLTILGHIRKYMKDG-GILLVRS 240 (286)
Q Consensus 200 --l~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pg-g~lv~r~ 240 (286)
-+++|+||.+.-. ...++...+.+++| |++++-.
T Consensus 261 ~~~~g~Dvvid~~G~-------~~~~~~~~~~l~~~~G~iv~~G 297 (376)
T 1e3i_A 261 LTAGGVDYSLDCAGT-------AQTLKAAVDCTVLGWGSCTVVG 297 (376)
T ss_dssp HHTSCBSEEEESSCC-------HHHHHHHHHTBCTTTCEEEECC
T ss_pred HhCCCccEEEECCCC-------HHHHHHHHHHhhcCCCEEEEEC
Confidence 1379999965421 13677888999999 9998754
No 306
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=97.66 E-value=4.2e-05 Score=72.26 Aligned_cols=105 Identities=14% Similarity=0.136 Sum_probs=67.3
Q ss_pred CCCCCCEEEEeccCCChhhHHHHHhhcCCCc-EEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcC---CC
Q 042119 127 GVVQPKKVAFVGSGPMPLTSIIMAKHHLTST-HFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQL---GE 202 (286)
Q Consensus 127 ~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~-~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l---~~ 202 (286)
.+.++++||.+|+|++|+.++.+|+. .|+ +|+++|.+++..+++++ +|. ..-+.....|..+....+ .+
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~--~Ga~~Vi~~~~~~~~~~~~~~----lGa-~~vi~~~~~~~~~~i~~~t~g~g 282 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKH--AGASKVILSEPSEVRRNLAKE----LGA-DHVIDPTKENFVEAVLDYTNGLG 282 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHH--TTCSEEEEECSCHHHHHHHHH----HTC-SEEECTTTSCHHHHHHHHTTTCC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHH--cCCCEEEEECCCHHHHHHHHH----cCC-CEEEcCCCCCHHHHHHHHhCCCC
Confidence 46889999999999999999999994 688 99999999999988876 462 111111112221111111 26
Q ss_pred cceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 203 YDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 203 fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
+|+||.+.-. ....-..+++.+.+.+++||++++-.
T Consensus 283 ~D~vid~~g~--~~~~~~~~~~~l~~~~~~~G~iv~~G 318 (404)
T 3ip1_A 283 AKLFLEATGV--PQLVWPQIEEVIWRARGINATVAIVA 318 (404)
T ss_dssp CSEEEECSSC--HHHHHHHHHHHHHHCSCCCCEEEECS
T ss_pred CCEEEECCCC--cHHHHHHHHHHHHhccCCCcEEEEeC
Confidence 9999965421 10111223333334449999999865
No 307
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=97.65 E-value=6.4e-05 Score=70.07 Aligned_cols=105 Identities=17% Similarity=0.182 Sum_probs=71.8
Q ss_pred HHHHhcCCC-CCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhc
Q 042119 121 TILSENGVV-QPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQ 199 (286)
Q Consensus 121 ~~l~~~~~~-~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~ 199 (286)
.++.+.+.. ++++||.+|+|++|..++.+|+. .|++|+++|.+++..+.+++ ++|. + ..+...|...+...
T Consensus 177 ~al~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~--~Ga~Vi~~~~~~~~~~~~~~---~lGa--~-~v~~~~~~~~~~~~ 248 (366)
T 1yqd_A 177 SPLKYFGLDEPGKHIGIVGLGGLGHVAVKFAKA--FGSKVTVISTSPSKKEEALK---NFGA--D-SFLVSRDQEQMQAA 248 (366)
T ss_dssp HHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESCGGGHHHHHH---TSCC--S-EEEETTCHHHHHHT
T ss_pred HHHHhcCcCCCCCEEEEECCCHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHH---hcCC--c-eEEeccCHHHHHHh
Confidence 345555667 89999999999999999999994 78999999999988777653 3662 2 22222221112222
Q ss_pred CCCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 200 LGEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 200 l~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
.+++|+||.+.-. . ..++...+.|++||+++.-.
T Consensus 249 ~~~~D~vid~~g~--~-----~~~~~~~~~l~~~G~iv~~g 282 (366)
T 1yqd_A 249 AGTLDGIIDTVSA--V-----HPLLPLFGLLKSHGKLILVG 282 (366)
T ss_dssp TTCEEEEEECCSS--C-----CCSHHHHHHEEEEEEEEECC
T ss_pred hCCCCEEEECCCc--H-----HHHHHHHHHHhcCCEEEEEc
Confidence 2479999966432 1 12345677889999988764
No 308
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=97.65 E-value=0.00023 Score=57.20 Aligned_cols=95 Identities=8% Similarity=-0.001 Sum_probs=66.6
Q ss_pred CCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchh--h--cCCCccee
Q 042119 131 PKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVK--E--QLGEYDCI 206 (286)
Q Consensus 131 ~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~--~--~l~~fD~V 206 (286)
..+|+.+|+|.+|.......+. .|.+|+++|.|++.++.+++ .| +.++.+|+.+.. . ...++|+|
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~--~g~~v~vid~~~~~~~~~~~----~g-----~~~i~gd~~~~~~l~~a~i~~ad~v 75 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLA--SDIPLVVIETSRTRVDELRE----RG-----VRAVLGNAANEEIMQLAHLECAKWL 75 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHH--TTCCEEEEESCHHHHHHHHH----TT-----CEEEESCTTSHHHHHHTTGGGCSEE
T ss_pred CCCEEEECcCHHHHHHHHHHHH--CCCCEEEEECCHHHHHHHHH----cC-----CCEEECCCCCHHHHHhcCcccCCEE
Confidence 4689999999988776555442 68999999999999877654 45 578889986532 1 23468988
Q ss_pred ehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 207 FLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 207 ~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
+++.- - ......+-...+.+.|+..++.|.
T Consensus 76 i~~~~--~--~~~n~~~~~~a~~~~~~~~iiar~ 105 (140)
T 3fwz_A 76 ILTIP--N--GYEAGEIVASARAKNPDIEIIARA 105 (140)
T ss_dssp EECCS--C--HHHHHHHHHHHHHHCSSSEEEEEE
T ss_pred EEECC--C--hHHHHHHHHHHHHHCCCCeEEEEE
Confidence 86532 1 222223445667788999999886
No 309
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=97.65 E-value=0.00023 Score=65.80 Aligned_cols=100 Identities=15% Similarity=0.162 Sum_probs=70.3
Q ss_pred CCEEEEeccCCChhh-HHHHHhhcCCCcEEEEEeCChHHHHHHHHHHH-------hcCCCC---------CCeEEEEccc
Q 042119 131 PKKVAFVGSGPMPLT-SIIMAKHHLTSTHFDNFDIDEAANDVARSIVA-------SDAEFE---------GRMKFLTRDI 193 (286)
Q Consensus 131 ~~~VL~IG~G~lp~t-ai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~-------~~g~l~---------~~i~f~~~D~ 193 (286)
-++|.+||+|.+|.+ +..+++ .|.+|+.+|++++.++.+++.++ +.|.+. .++++. .|.
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~---~G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~-~~~ 81 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFAS---GGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSC-TNL 81 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHH---TTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEE-CCH
T ss_pred CceEEEEeeCHHHHHHHHHHHH---CCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEe-CCH
Confidence 368999999998876 344555 68899999999999999876532 234211 135553 333
Q ss_pred cchhhcCCCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEe
Q 042119 194 MEVKEQLGEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVR 239 (286)
Q Consensus 194 ~~~~~~l~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r 239 (286)
.....+.|+|+.+.. -+.+-|..++.++.+.++||.+|+..
T Consensus 82 ---~eav~~aDlVieavp--e~~~~k~~v~~~l~~~~~~~~Ii~s~ 122 (319)
T 2dpo_A 82 ---AEAVEGVVHIQECVP--ENLDLKRKIFAQLDSIVDDRVVLSSS 122 (319)
T ss_dssp ---HHHTTTEEEEEECCC--SCHHHHHHHHHHHHTTCCSSSEEEEC
T ss_pred ---HHHHhcCCEEEEecc--CCHHHHHHHHHHHHhhCCCCeEEEEe
Confidence 233567899998753 23456889999999999999977643
No 310
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=97.64 E-value=0.00018 Score=65.53 Aligned_cols=101 Identities=13% Similarity=0.074 Sum_probs=70.1
Q ss_pred HHHHhcCCCCCCEEEEec-cCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccc-hhh
Q 042119 121 TILSENGVVQPKKVAFVG-SGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIME-VKE 198 (286)
Q Consensus 121 ~~l~~~~~~~~~~VL~IG-~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~-~~~ 198 (286)
.++.+..++++++||.+| +|++|+.++.+|+. .|++|++++ +++..++++ ++|. .. .+..+-.+ +..
T Consensus 143 ~al~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~--~Ga~vi~~~-~~~~~~~~~----~lGa-~~---~i~~~~~~~~~~ 211 (321)
T 3tqh_A 143 QALNQAEVKQGDVVLIHAGAGGVGHLAIQLAKQ--KGTTVITTA-SKRNHAFLK----ALGA-EQ---CINYHEEDFLLA 211 (321)
T ss_dssp HHHHHTTCCTTCEEEESSTTSHHHHHHHHHHHH--TTCEEEEEE-CHHHHHHHH----HHTC-SE---EEETTTSCHHHH
T ss_pred HHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHH--cCCEEEEEe-ccchHHHHH----HcCC-CE---EEeCCCcchhhh
Confidence 344556779999999997 99999999999994 789999998 455455544 4672 21 22222122 344
Q ss_pred cCCCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 199 QLGEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 199 ~l~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
...++|+||.+.- . ..++...+.|++||+++.-.
T Consensus 212 ~~~g~D~v~d~~g------~--~~~~~~~~~l~~~G~iv~~g 245 (321)
T 3tqh_A 212 ISTPVDAVIDLVG------G--DVGIQSIDCLKETGCIVSVP 245 (321)
T ss_dssp CCSCEEEEEESSC------H--HHHHHHGGGEEEEEEEEECC
T ss_pred hccCCCEEEECCC------c--HHHHHHHHhccCCCEEEEeC
Confidence 4568999996542 1 12377889999999998753
No 311
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=97.64 E-value=5.4e-05 Score=68.84 Aligned_cols=96 Identities=16% Similarity=0.172 Sum_probs=68.3
Q ss_pred HHHhcCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCC
Q 042119 122 ILSENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLG 201 (286)
Q Consensus 122 ~l~~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~ 201 (286)
++.+..++++++||.+|+|++|+.++.+|+. .|++|+++| +++..+++++ +|. +. ++ -|..++ -.
T Consensus 134 al~~~~~~~g~~VlV~GaG~vG~~a~qlak~--~Ga~Vi~~~-~~~~~~~~~~----lGa--~~--v~-~d~~~v---~~ 198 (315)
T 3goh_A 134 AFEKIPLTKQREVLIVGFGAVNNLLTQMLNN--AGYVVDLVS-ASLSQALAAK----RGV--RH--LY-REPSQV---TQ 198 (315)
T ss_dssp HHTTSCCCSCCEEEEECCSHHHHHHHHHHHH--HTCEEEEEC-SSCCHHHHHH----HTE--EE--EE-SSGGGC---CS
T ss_pred HHhhcCCCCCCEEEEECCCHHHHHHHHHHHH--cCCEEEEEE-ChhhHHHHHH----cCC--CE--EE-cCHHHh---CC
Confidence 4445567899999999999999999999994 689999999 9998888766 562 11 11 242222 24
Q ss_pred CcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 202 EYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 202 ~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
+||+||.+.-- + .+....+.|+|||+++.-.
T Consensus 199 g~Dvv~d~~g~-----~---~~~~~~~~l~~~G~~v~~g 229 (315)
T 3goh_A 199 KYFAIFDAVNS-----Q---NAAALVPSLKANGHIICIQ 229 (315)
T ss_dssp CEEEEECC---------------TTGGGEEEEEEEEEEC
T ss_pred CccEEEECCCc-----h---hHHHHHHHhcCCCEEEEEe
Confidence 79999965421 1 2356788999999988763
No 312
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=97.64 E-value=2.8e-05 Score=72.67 Aligned_cols=103 Identities=20% Similarity=0.209 Sum_probs=71.5
Q ss_pred HhcCCCCCCEEEEeccCCChhhHHHHHhhcCCCc-EEEEEeCChHHHHHHHHHHHhcCCCCCCeEEE--EccccchhhcC
Q 042119 124 SENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTST-HFDNFDIDEAANDVARSIVASDAEFEGRMKFL--TRDIMEVKEQL 200 (286)
Q Consensus 124 ~~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~-~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~--~~D~~~~~~~l 200 (286)
.+..+.++++||.+|+|++|+.++.+|+. .|+ +|+++|.+++..++|++ +|. ..-+.+. ..|..+....+
T Consensus 187 ~~~~~~~g~~VlV~GaG~vG~~a~q~a~~--~Ga~~Vi~~~~~~~~~~~a~~----lGa-~~vi~~~~~~~~~~~~i~~~ 259 (378)
T 3uko_A 187 NTAKVEPGSNVAIFGLGTVGLAVAEGAKT--AGASRIIGIDIDSKKYETAKK----FGV-NEFVNPKDHDKPIQEVIVDL 259 (378)
T ss_dssp TTTCCCTTCCEEEECCSHHHHHHHHHHHH--HTCSCEEEECSCTTHHHHHHT----TTC-CEEECGGGCSSCHHHHHHHH
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHH--cCCCeEEEEcCCHHHHHHHHH----cCC-cEEEccccCchhHHHHHHHh
Confidence 34567899999999999999999999994 687 89999999999887764 562 2111111 11111111111
Q ss_pred --CCcceeehhhhccCChhHHHHHHHHHHhhccCC-cEEEEee
Q 042119 201 --GEYDCIFLAALVGMSKEEKLTILGHIRKYMKDG-GILLVRS 240 (286)
Q Consensus 201 --~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pg-g~lv~r~ 240 (286)
++||+||.+.-. ...++...+.+++| |++++-.
T Consensus 260 ~~gg~D~vid~~g~-------~~~~~~~~~~l~~g~G~iv~~G 295 (378)
T 3uko_A 260 TDGGVDYSFECIGN-------VSVMRAALECCHKGWGTSVIVG 295 (378)
T ss_dssp TTSCBSEEEECSCC-------HHHHHHHHHTBCTTTCEEEECS
T ss_pred cCCCCCEEEECCCC-------HHHHHHHHHHhhccCCEEEEEc
Confidence 379999966431 14677888999997 9988865
No 313
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=97.64 E-value=4.2e-05 Score=71.30 Aligned_cols=100 Identities=16% Similarity=0.107 Sum_probs=71.0
Q ss_pred hcCCCCCCEEEEeccCCChhhHHHHHhhcCCCc-EEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEc----cccchhhc
Q 042119 125 ENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTST-HFDNFDIDEAANDVARSIVASDAEFEGRMKFLTR----DIMEVKEQ 199 (286)
Q Consensus 125 ~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~-~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~----D~~~~~~~ 199 (286)
...++++++||.+|+|++|+.++.+|+. .|+ +|+++|.+++..+++++ +|. +. .+... |..+....
T Consensus 186 ~~~~~~g~~VlV~GaG~vG~~aiqlak~--~Ga~~Vi~~~~~~~~~~~a~~----lGa--~~-vi~~~~~~~~~~~~i~~ 256 (373)
T 1p0f_A 186 TAKVTPGSTCAVFGLGGVGFSAIVGCKA--AGASRIIGVGTHKDKFPKAIE----LGA--TE-CLNPKDYDKPIYEVICE 256 (373)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHH--HTCSEEEEECSCGGGHHHHHH----TTC--SE-EECGGGCSSCHHHHHHH
T ss_pred ccCCCCCCEEEEECCCHHHHHHHHHHHH--cCCCeEEEECCCHHHHHHHHH----cCC--cE-EEecccccchHHHHHHH
Confidence 4567889999999999999999999994 577 89999999999888765 562 21 12111 11111111
Q ss_pred C--CCcceeehhhhccCChhHHHHHHHHHHhhccCC-cEEEEee
Q 042119 200 L--GEYDCIFLAALVGMSKEEKLTILGHIRKYMKDG-GILLVRS 240 (286)
Q Consensus 200 l--~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pg-g~lv~r~ 240 (286)
. ++||+||.+.-. ...++...+.|++| |+++.-.
T Consensus 257 ~t~gg~Dvvid~~g~-------~~~~~~~~~~l~~~~G~iv~~G 293 (373)
T 1p0f_A 257 KTNGGVDYAVECAGR-------IETMMNALQSTYCGSGVTVVLG 293 (373)
T ss_dssp HTTSCBSEEEECSCC-------HHHHHHHHHTBCTTTCEEEECC
T ss_pred HhCCCCCEEEECCCC-------HHHHHHHHHHHhcCCCEEEEEc
Confidence 1 379999965421 13677888999999 9998764
No 314
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=97.64 E-value=7.1e-05 Score=69.69 Aligned_cols=98 Identities=15% Similarity=0.158 Sum_probs=70.3
Q ss_pred cCCCCCCEEEEec-cCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEE--ccccchhhc--C
Q 042119 126 NGVVQPKKVAFVG-SGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLT--RDIMEVKEQ--L 200 (286)
Q Consensus 126 ~~~~~~~~VL~IG-~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~--~D~~~~~~~--l 200 (286)
..++++++||.+| +|++|..++.+|+. .|++|+++|.+++..+.+++ +|. + ..+.. .|..+.... -
T Consensus 159 ~~~~~g~~VlV~Ga~G~iG~~~~q~a~~--~Ga~Vi~~~~~~~~~~~~~~----~Ga--~-~~~~~~~~~~~~~~~~~~~ 229 (362)
T 2c0c_A 159 GGLSEGKKVLVTAAAGGTGQFAMQLSKK--AKCHVIGTCSSDEKSAFLKS----LGC--D-RPINYKTEPVGTVLKQEYP 229 (362)
T ss_dssp TCCCTTCEEEETTTTBTTHHHHHHHHHH--TTCEEEEEESSHHHHHHHHH----TTC--S-EEEETTTSCHHHHHHHHCT
T ss_pred cCCCCCCEEEEeCCCcHHHHHHHHHHHh--CCCEEEEEECCHHHHHHHHH----cCC--c-EEEecCChhHHHHHHHhcC
Confidence 3568899999999 79999999999994 68999999999998888765 562 2 11211 121111111 1
Q ss_pred CCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 201 GEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 201 ~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
.++|+||.++ | . ..++...+.|++||++++-.
T Consensus 230 ~g~D~vid~~--g----~--~~~~~~~~~l~~~G~iv~~g 261 (362)
T 2c0c_A 230 EGVDVVYESV--G----G--AMFDLAVDALATKGRLIVIG 261 (362)
T ss_dssp TCEEEEEECS--C----T--HHHHHHHHHEEEEEEEEECC
T ss_pred CCCCEEEECC--C----H--HHHHHHHHHHhcCCEEEEEe
Confidence 3699999654 3 1 36778899999999998864
No 315
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=97.64 E-value=3.5e-05 Score=65.08 Aligned_cols=99 Identities=10% Similarity=0.106 Sum_probs=67.8
Q ss_pred cCCCCCCEEEEec-cCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEcc--ccc-hhhcC-
Q 042119 126 NGVVQPKKVAFVG-SGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRD--IME-VKEQL- 200 (286)
Q Consensus 126 ~~~~~~~~VL~IG-~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D--~~~-~~~~l- 200 (286)
..+.++++|+.+| +|++|..+..+++. .|++|+++|.+++..+.+++ .| . ...+...+ ..+ +....
T Consensus 34 ~~~~~g~~vlV~Ga~ggiG~~~~~~~~~--~G~~V~~~~~~~~~~~~~~~----~g-~--~~~~d~~~~~~~~~~~~~~~ 104 (198)
T 1pqw_A 34 GRLSPGERVLIHSATGGVGMAAVSIAKM--IGARIYTTAGSDAKREMLSR----LG-V--EYVGDSRSVDFADEILELTD 104 (198)
T ss_dssp SCCCTTCEEEETTTTSHHHHHHHHHHHH--HTCEEEEEESSHHHHHHHHT----TC-C--SEEEETTCSTHHHHHHHHTT
T ss_pred hCCCCCCEEEEeeCCChHHHHHHHHHHH--cCCEEEEEeCCHHHHHHHHH----cC-C--CEEeeCCcHHHHHHHHHHhC
Confidence 3567889999999 68889888888874 68999999999988776644 56 2 22221111 111 11111
Q ss_pred -CCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEeec
Q 042119 201 -GEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRSA 241 (286)
Q Consensus 201 -~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~~ 241 (286)
.++|+|+.++ | . ..++...+.|+|||+++.-..
T Consensus 105 ~~~~D~vi~~~--g---~---~~~~~~~~~l~~~G~~v~~g~ 138 (198)
T 1pqw_A 105 GYGVDVVLNSL--A---G---EAIQRGVQILAPGGRFIELGK 138 (198)
T ss_dssp TCCEEEEEECC--C---T---HHHHHHHHTEEEEEEEEECSC
T ss_pred CCCCeEEEECC--c---h---HHHHHHHHHhccCCEEEEEcC
Confidence 3599999654 3 1 367788999999999988653
No 316
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=97.63 E-value=1.8e-05 Score=75.05 Aligned_cols=100 Identities=17% Similarity=0.306 Sum_probs=70.8
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEc-----------------
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTR----------------- 191 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~----------------- 191 (286)
.++.+|+.||+|++|..+..+++. .|++|+++|++++..+.+++ +|. +|...
T Consensus 182 v~~~kV~ViG~G~iG~~aa~~a~~--lGa~V~v~D~~~~~l~~~~~----lGa-----~~~~l~~~~~~~~gya~~~~~~ 250 (381)
T 3p2y_A 182 VKPASALVLGVGVAGLQALATAKR--LGAKTTGYDVRPEVAEQVRS----VGA-----QWLDLGIDAAGEGGYARELSEA 250 (381)
T ss_dssp ECCCEEEEESCSHHHHHHHHHHHH--HTCEEEEECSSGGGHHHHHH----TTC-----EECCCC-------------CHH
T ss_pred cCCCEEEEECchHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHH----cCC-----eEEeccccccccccchhhhhHH
Confidence 478999999999999999999984 68999999999998887766 341 22211
Q ss_pred ----cccchhhcCCCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 192 ----DIMEVKEQLGEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 192 ----D~~~~~~~l~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
+..++...+.++|+|+.+.++.....++ -+-+++.+.||||++|+--.
T Consensus 251 ~~~~~~~~l~e~l~~aDIVI~tv~iPg~~ap~-Lvt~emv~~MkpGsVIVDvA 302 (381)
T 3p2y_A 251 ERAQQQQALEDAITKFDIVITTALVPGRPAPR-LVTAAAATGMQPGSVVVDLA 302 (381)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCCCTTSCCCC-CBCHHHHHTSCTTCEEEETT
T ss_pred HHhhhHHHHHHHHhcCCEEEECCCCCCcccce-eecHHHHhcCCCCcEEEEEe
Confidence 1112333446899999776552211222 14468899999999888765
No 317
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=97.63 E-value=2.2e-05 Score=75.02 Aligned_cols=100 Identities=21% Similarity=0.298 Sum_probs=70.9
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEcc----------------
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRD---------------- 192 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D---------------- 192 (286)
.++.+|+.||+|+.|+.+..+++. .|++|+++|++++..+.+++ +|. +|...+
T Consensus 188 v~~~kV~ViG~G~iG~~aa~~a~~--lGa~V~v~D~~~~~l~~~~~----~G~-----~~~~~~~~~~~d~~~~~~ya~e 256 (405)
T 4dio_A 188 VPAAKIFVMGAGVAGLQAIATARR--LGAVVSATDVRPAAKEQVAS----LGA-----KFIAVEDEEFKAAETAGGYAKE 256 (405)
T ss_dssp ECCCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSTTHHHHHHH----TTC-----EECCCCC---------------
T ss_pred cCCCEEEEECCcHHHHHHHHHHHH--CCCEEEEEcCCHHHHHHHHH----cCC-----ceeecccccccccccccchhhh
Confidence 478999999999999999999984 79999999999998887766 341 121110
Q ss_pred ---------ccchhhcCCCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 193 ---------IMEVKEQLGEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 193 ---------~~~~~~~l~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
...+...+.+.|+|+.+.++.....++ -+-+++.+.||||++|+--+
T Consensus 257 ~s~~~~~~~~~~l~e~l~~aDVVI~tvlipg~~ap~-Lvt~emv~~Mk~GsVIVDvA 312 (405)
T 4dio_A 257 MSGEYQVKQAALVAEHIAKQDIVITTALIPGRPAPR-LVTREMLDSMKPGSVVVDLA 312 (405)
T ss_dssp --CHHHHHHHHHHHHHHHTCSEEEECCCCSSSCCCC-CBCHHHHTTSCTTCEEEETT
T ss_pred cchhhhhhhHhHHHHHhcCCCEEEECCcCCCCCCCE-EecHHHHhcCCCCCEEEEEe
Confidence 112222335799999877663222222 14568899999999988765
No 318
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=97.61 E-value=0.00027 Score=63.58 Aligned_cols=140 Identities=14% Similarity=0.117 Sum_probs=93.7
Q ss_pred CcccccccCcCccchhhhhHHHH-HHHHhcCCCCCCEEEEeccCCChhhHHHHHhh------cCCCcEEEEEe-----CC
Q 042119 98 QPLNNLSLFPYYGNYVKLSKLEY-TILSENGVVQPKKVAFVGSGPMPLTSIIMAKH------HLTSTHFDNFD-----ID 165 (286)
Q Consensus 98 ~p~~~L~~fpy~~ny~~l~~~E~-~~l~~~~~~~~~~VL~IG~G~lp~tai~lA~~------~~~g~~V~~iD-----id 165 (286)
.|...|..||.|-.-..+++.-. ..+-+....-|..|++.|+- -|-|++.+|+. ..+.-+|.++| ..
T Consensus 36 ~~~e~l~~~~~~~~~~~l~~~l~~~~l~~~i~~vpG~ivE~GV~-rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~ 114 (257)
T 3tos_A 36 PTEELVNNLPLFLRRHQMTDLLSMDALYRQVLDVPGVIMEFGVR-FGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPD 114 (257)
T ss_dssp CGGGGGGCGGGGCCHHHHHHHHHHHHHHHHTTTSCSEEEEECCT-TCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCS
T ss_pred ChHHHHHhHHhhhhHHHHHHHHHHHHHHHHhhCCCCeEEEEecc-cCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCC
Confidence 44566778887766555554421 12223334667899999998 57788887752 12568999999 43
Q ss_pred hHH-------------------HHHHHHHH------HhcCCCCCCeEEEEccccchhhcC------CCcceeehhhhccC
Q 042119 166 EAA-------------------NDVARSIV------ASDAEFEGRMKFLTRDIMEVKEQL------GEYDCIFLAALVGM 214 (286)
Q Consensus 166 ~~a-------------------i~~Ar~~~------~~~g~l~~~i~f~~~D~~~~~~~l------~~fD~V~~aalvg~ 214 (286)
+.. .+.-++++ ++.|...++|+++.|++.+....+ ..||+|++++-.
T Consensus 115 ~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~-- 192 (257)
T 3tos_A 115 VNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHECSDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDL-- 192 (257)
T ss_dssp CCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHHTTSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCC--
T ss_pred CccccccccccccCcccccchhHHHHHHHHHHHhhhhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcc--
Confidence 211 11122222 346733589999999998765432 259999999743
Q ss_pred ChhHHHHHHHHHHhhccCCcEEEEeec
Q 042119 215 SKEEKLTILGHIRKYMKDGGILLVRSA 241 (286)
Q Consensus 215 ~~~~k~~vl~~l~~~l~pgg~lv~r~~ 241 (286)
-+.-...++.+.++|+|||++++.+.
T Consensus 193 -Y~~t~~~le~~~p~l~~GGvIv~DD~ 218 (257)
T 3tos_A 193 -YEPTKAVLEAIRPYLTKGSIVAFDEL 218 (257)
T ss_dssp -HHHHHHHHHHHGGGEEEEEEEEESST
T ss_pred -cchHHHHHHHHHHHhCCCcEEEEcCC
Confidence 25566789999999999999999884
No 319
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=97.61 E-value=6.1e-05 Score=70.20 Aligned_cols=100 Identities=13% Similarity=0.135 Sum_probs=70.9
Q ss_pred hcCCCCCCEEEEeccCCChhhHHHHHhhcCCCc-EEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEc----cccchhhc
Q 042119 125 ENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTST-HFDNFDIDEAANDVARSIVASDAEFEGRMKFLTR----DIMEVKEQ 199 (286)
Q Consensus 125 ~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~-~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~----D~~~~~~~ 199 (286)
+..+.++++||.+|+|++|+.++.+|+. .|+ +|+++|.+++..+.+++ +|. +. .+... |..+....
T Consensus 187 ~~~~~~g~~VlV~GaG~vG~~a~qla~~--~Ga~~Vi~~~~~~~~~~~~~~----lGa--~~-vi~~~~~~~~~~~~~~~ 257 (374)
T 1cdo_A 187 TAKVEPGSTCAVFGLGAVGLAAVMGCHS--AGAKRIIAVDLNPDKFEKAKV----FGA--TD-FVNPNDHSEPISQVLSK 257 (374)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHH--TTCSEEEEECSCGGGHHHHHH----TTC--CE-EECGGGCSSCHHHHHHH
T ss_pred ccCCCCCCEEEEECCCHHHHHHHHHHHH--cCCCEEEEEcCCHHHHHHHHH----hCC--ce-EEeccccchhHHHHHHH
Confidence 4457889999999999999999999994 688 89999999999888765 562 21 12111 11111111
Q ss_pred --CCCcceeehhhhccCChhHHHHHHHHHHhhccCC-cEEEEee
Q 042119 200 --LGEYDCIFLAALVGMSKEEKLTILGHIRKYMKDG-GILLVRS 240 (286)
Q Consensus 200 --l~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pg-g~lv~r~ 240 (286)
-+++|+||.+.-. ...++...+.|+|| |+++.-.
T Consensus 258 ~~~~g~D~vid~~g~-------~~~~~~~~~~l~~~~G~iv~~G 294 (374)
T 1cdo_A 258 MTNGGVDFSLECVGN-------VGVMRNALESCLKGWGVSVLVG 294 (374)
T ss_dssp HHTSCBSEEEECSCC-------HHHHHHHHHTBCTTTCEEEECS
T ss_pred HhCCCCCEEEECCCC-------HHHHHHHHHHhhcCCcEEEEEc
Confidence 1369999965421 13677888999999 9998764
No 320
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=97.60 E-value=8e-05 Score=68.32 Aligned_cols=105 Identities=15% Similarity=0.081 Sum_probs=73.0
Q ss_pred HHHhcCCCCCCEEEEeccCCChhhHHHHHhhcCCCc-EEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchh---
Q 042119 122 ILSENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTST-HFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVK--- 197 (286)
Q Consensus 122 ~l~~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~-~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~--- 197 (286)
.+.+....++++||..|+|++|..++.+|+. .|+ .++++|.+++..++|++ +| ...-+.+...|..+..
T Consensus 152 ~~~~~~~~~g~~VlV~GaG~vG~~aiq~ak~--~G~~~vi~~~~~~~k~~~a~~----lG-a~~~i~~~~~~~~~~~~~~ 224 (346)
T 4a2c_A 152 AFHLAQGCENKNVIIIGAGTIGLLAIQCAVA--LGAKSVTAIDISSEKLALAKS----FG-AMQTFNSSEMSAPQMQSVL 224 (346)
T ss_dssp HHHHTTCCTTSEEEEECCSHHHHHHHHHHHH--TTCSEEEEEESCHHHHHHHHH----TT-CSEEEETTTSCHHHHHHHH
T ss_pred HHHHhccCCCCEEEEECCCCcchHHHHHHHH--cCCcEEEEEechHHHHHHHHH----cC-CeEEEeCCCCCHHHHHHhh
Confidence 3445567899999999999999999999994 454 57899999999888776 56 2222222222222221
Q ss_pred hcCCCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 198 EQLGEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 198 ~~l~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
.+...+|+|+.+.-. ...++...+.+++||.+++-.
T Consensus 225 ~~~~g~d~v~d~~G~-------~~~~~~~~~~l~~~G~~v~~g 260 (346)
T 4a2c_A 225 RELRFNQLILETAGV-------PQTVELAVEIAGPHAQLALVG 260 (346)
T ss_dssp GGGCSSEEEEECSCS-------HHHHHHHHHHCCTTCEEEECC
T ss_pred cccCCcccccccccc-------cchhhhhhheecCCeEEEEEe
Confidence 123468998865432 136777888999999999865
No 321
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=97.60 E-value=8.1e-05 Score=69.40 Aligned_cols=95 Identities=12% Similarity=0.118 Sum_probs=68.0
Q ss_pred CCCEEEEec-cCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEE-ccccchhhcC--CCcce
Q 042119 130 QPKKVAFVG-SGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLT-RDIMEVKEQL--GEYDC 205 (286)
Q Consensus 130 ~~~~VL~IG-~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~-~D~~~~~~~l--~~fD~ 205 (286)
++++||.+| +|++|+.++.+|+ +..|++|+++|.+++..+++++ +|. +.+ +-. .|..+....+ +++|+
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak-~~~g~~Vi~~~~~~~~~~~~~~----lGa--d~v-i~~~~~~~~~v~~~~~~g~Dv 242 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIAR-QRTDLTVIATASRPETQEWVKS----LGA--HHV-IDHSKPLAAEVAALGLGAPAF 242 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHH-HHCCSEEEEECSSHHHHHHHHH----TTC--SEE-ECTTSCHHHHHHTTCSCCEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-HhcCCEEEEEeCCHHHHHHHHH----cCC--CEE-EeCCCCHHHHHHHhcCCCceE
Confidence 788999999 9999999999998 3468999999999999888765 562 211 111 1221111122 36999
Q ss_pred eehhhhccCChhHHHHHHHHHHhhccCCcEEEEe
Q 042119 206 IFLAALVGMSKEEKLTILGHIRKYMKDGGILLVR 239 (286)
Q Consensus 206 V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r 239 (286)
||.+... ...++...+.|+|||++++-
T Consensus 243 vid~~g~-------~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 243 VFSTTHT-------DKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp EEECSCH-------HHHHHHHHHHSCTTCEEEEC
T ss_pred EEECCCc-------hhhHHHHHHHhcCCCEEEEE
Confidence 9965421 14677888999999999875
No 322
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=97.60 E-value=0.00013 Score=75.30 Aligned_cols=111 Identities=10% Similarity=0.098 Sum_probs=71.6
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCC---CcEEEEEeCChHHHHHH--HHHHHh----cCCCCCCeEEEEccccchh-h
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLT---STHFDNFDIDEAANDVA--RSIVAS----DAEFEGRMKFLTRDIMEVK-E 198 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~---g~~V~~iDid~~ai~~A--r~~~~~----~g~l~~~i~f~~~D~~~~~-~ 198 (286)
.++.+|+|.|||++++. +.++++ .+ ..+++|+|+|+.+++.| +..+.. .| . ....+...|..+.. .
T Consensus 320 ~~g~rVLDPaCGSG~FL-IaaA~~-l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhG-i-~~~~I~~dD~L~~~~~ 395 (878)
T 3s1s_A 320 TEDEVISDPAAGSGNLL-ATVSAG-FNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSS-N-NAPTITGEDVCSLNPE 395 (878)
T ss_dssp CTTCEEEETTCTTSHHH-HHHHHT-STTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBT-T-BCCEEECCCGGGCCGG
T ss_pred CCCCEEEECCCCccHHH-HHHHHH-hcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcC-C-CcceEEecchhccccc
Confidence 46789999999987665 444542 32 46899999999999999 544333 22 1 22466667765422 1
Q ss_pred cCCCcceeehhhhc----cCChh------------------------HHHHHHHHHHhhccCCcEEEEeecCc
Q 042119 199 QLGEYDCIFLAALV----GMSKE------------------------EKLTILGHIRKYMKDGGILLVRSAKG 243 (286)
Q Consensus 199 ~l~~fD~V~~aalv----g~~~~------------------------~k~~vl~~l~~~l~pgg~lv~r~~~g 243 (286)
....||+|+..--- .++.. ....+++++.+.|+|||++.+-.++|
T Consensus 396 ~~~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~s 468 (878)
T 3s1s_A 396 DFANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQ 468 (878)
T ss_dssp GGTTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEETH
T ss_pred ccCCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEChH
Confidence 33579998743211 11100 12347889999999999988876544
No 323
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=97.59 E-value=3.6e-05 Score=71.11 Aligned_cols=104 Identities=13% Similarity=0.130 Sum_probs=71.4
Q ss_pred HHHhcCCCCCCEEEEeccCCChhhHHHHHhhcCCCc-EEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhc-
Q 042119 122 ILSENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTST-HFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQ- 199 (286)
Q Consensus 122 ~l~~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~-~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~- 199 (286)
++.+..+ ++++||.+|+|++|..++.+|+. .|+ +|+++|.+++..+.+++ +|. ..-+.....|..+....
T Consensus 160 ~l~~~~~-~g~~VlV~GaG~vG~~~~q~a~~--~Ga~~Vi~~~~~~~~~~~~~~----~Ga-~~~~~~~~~~~~~~v~~~ 231 (348)
T 2d8a_A 160 TVLAGPI-SGKSVLITGAGPLGLLGIAVAKA--SGAYPVIVSEPSDFRRELAKK----VGA-DYVINPFEEDVVKEVMDI 231 (348)
T ss_dssp HHTTSCC-TTCCEEEECCSHHHHHHHHHHHH--TTCCSEEEECSCHHHHHHHHH----HTC-SEEECTTTSCHHHHHHHH
T ss_pred HHHhcCC-CCCEEEEECCCHHHHHHHHHHHH--cCCCEEEEECCCHHHHHHHHH----hCC-CEEECCCCcCHHHHHHHH
Confidence 3445567 89999999999999999999994 688 99999999998888775 452 11111111121111111
Q ss_pred --CCCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 200 --LGEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 200 --l~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
-.++|+||.+.-. ...++...+.|++||+++.-.
T Consensus 232 ~~g~g~D~vid~~g~-------~~~~~~~~~~l~~~G~iv~~g 267 (348)
T 2d8a_A 232 TDGNGVDVFLEFSGA-------PKALEQGLQAVTPAGRVSLLG 267 (348)
T ss_dssp TTTSCEEEEEECSCC-------HHHHHHHHHHEEEEEEEEECC
T ss_pred cCCCCCCEEEECCCC-------HHHHHHHHHHHhcCCEEEEEc
Confidence 1269999966431 136778889999999998865
No 324
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=97.58 E-value=5.4e-05 Score=69.42 Aligned_cols=97 Identities=13% Similarity=0.068 Sum_probs=69.6
Q ss_pred CCCCCCEEEEec-cCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEE--ccccchhhc---C
Q 042119 127 GVVQPKKVAFVG-SGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLT--RDIMEVKEQ---L 200 (286)
Q Consensus 127 ~~~~~~~VL~IG-~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~--~D~~~~~~~---l 200 (286)
.+.++++||.+| +|++|..++.+|+. .|++|+++|.+++..+.+++ +|. ...+.. .|..+.... -
T Consensus 145 ~~~~g~~vlV~Ga~g~iG~~~~~~a~~--~Ga~Vi~~~~~~~~~~~~~~----~ga---~~~~~~~~~~~~~~~~~~~~~ 215 (334)
T 3qwb_A 145 HVKKGDYVLLFAAAGGVGLILNQLLKM--KGAHTIAVASTDEKLKIAKE----YGA---EYLINASKEDILRQVLKFTNG 215 (334)
T ss_dssp CCCTTCEEEESSTTBHHHHHHHHHHHH--TTCEEEEEESSHHHHHHHHH----TTC---SEEEETTTSCHHHHHHHHTTT
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHH----cCC---cEEEeCCCchHHHHHHHHhCC
Confidence 568899999999 89999999999984 78999999999998887765 462 222221 111111111 1
Q ss_pred CCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 201 GEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 201 ~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
.++|+||.++-. ..++...+.|+|||+++.-.
T Consensus 216 ~g~D~vid~~g~--------~~~~~~~~~l~~~G~iv~~G 247 (334)
T 3qwb_A 216 KGVDASFDSVGK--------DTFEISLAALKRKGVFVSFG 247 (334)
T ss_dssp SCEEEEEECCGG--------GGHHHHHHHEEEEEEEEECC
T ss_pred CCceEEEECCCh--------HHHHHHHHHhccCCEEEEEc
Confidence 369999966431 35777888999999998864
No 325
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.56 E-value=0.00012 Score=69.11 Aligned_cols=88 Identities=14% Similarity=0.217 Sum_probs=61.8
Q ss_pred CCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceee
Q 042119 128 VVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIF 207 (286)
Q Consensus 128 ~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~ 207 (286)
+.++++|+|+||+|+|.|-. +++ .|++|++||+.+= +..+ ... .+|+++.+|+.+....-+.||+|+
T Consensus 209 l~~G~~vlDLGAaPGGWT~~-l~~---rg~~V~aVD~~~l----~~~l-~~~----~~V~~~~~d~~~~~~~~~~~D~vv 275 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQ-LVK---RNMWVYSVDNGPM----AQSL-MDT----GQVTWLREDGFKFRPTRSNISWMV 275 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHH-HHH---TTCEEEEECSSCC----CHHH-HTT----TCEEEECSCTTTCCCCSSCEEEEE
T ss_pred CCCCCEEEEeCcCCCHHHHH-HHH---CCCEEEEEEhhhc----Chhh-ccC----CCeEEEeCccccccCCCCCcCEEE
Confidence 47899999999999999865 455 5899999998641 1121 222 479999999977655445799998
Q ss_pred hhhhccCChhHHHHHHHHHHhhccCC
Q 042119 208 LAALVGMSKEEKLTILGHIRKYMKDG 233 (286)
Q Consensus 208 ~aalvg~~~~~k~~vl~~l~~~l~pg 233 (286)
.+.. ++..++++.+.+.+..|
T Consensus 276 sDm~-----~~p~~~~~l~~~wl~~~ 296 (375)
T 4auk_A 276 CDMV-----EKPAKVAALMAQWLVNG 296 (375)
T ss_dssp ECCS-----SCHHHHHHHHHHHHHTT
T ss_pred EcCC-----CChHHhHHHHHHHHhcc
Confidence 7643 23345666666655554
No 326
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=97.56 E-value=6.1e-05 Score=69.03 Aligned_cols=101 Identities=10% Similarity=0.023 Sum_probs=71.1
Q ss_pred HhcCCCCCCEEEEecc-CCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEc--cccchhhc-
Q 042119 124 SENGVVQPKKVAFVGS-GPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTR--DIMEVKEQ- 199 (286)
Q Consensus 124 ~~~~~~~~~~VL~IG~-G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~--D~~~~~~~- 199 (286)
....+.++++||.+|+ |++|..++.+|+. .|++|+++|.+++..+.+. +++| . ...+... |..+....
T Consensus 143 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~--~Ga~Vi~~~~~~~~~~~~~---~~~g-~--~~~~~~~~~~~~~~~~~~ 214 (336)
T 4b7c_A 143 DVGQPKNGETVVISGAAGAVGSVAGQIARL--KGCRVVGIAGGAEKCRFLV---EELG-F--DGAIDYKNEDLAAGLKRE 214 (336)
T ss_dssp HTTCCCTTCEEEESSTTSHHHHHHHHHHHH--TTCEEEEEESSHHHHHHHH---HTTC-C--SEEEETTTSCHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHH---HHcC-C--CEEEECCCHHHHHHHHHh
Confidence 4556789999999998 8999999999984 7899999999998877762 2356 2 2222211 11111111
Q ss_pred -CCCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 200 -LGEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 200 -l~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
-+++|+||.++- . ..++...+.|++||+++.-.
T Consensus 215 ~~~~~d~vi~~~g------~--~~~~~~~~~l~~~G~iv~~G 248 (336)
T 4b7c_A 215 CPKGIDVFFDNVG------G--EILDTVLTRIAFKARIVLCG 248 (336)
T ss_dssp CTTCEEEEEESSC------H--HHHHHHHTTEEEEEEEEECC
T ss_pred cCCCceEEEECCC------c--chHHHHHHHHhhCCEEEEEe
Confidence 136999986542 1 36788899999999998854
No 327
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=97.56 E-value=3.8e-05 Score=70.28 Aligned_cols=98 Identities=9% Similarity=-0.024 Sum_probs=70.3
Q ss_pred cCCCCCCEEEEec-cCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEc--cccchh-hcC-
Q 042119 126 NGVVQPKKVAFVG-SGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTR--DIMEVK-EQL- 200 (286)
Q Consensus 126 ~~~~~~~~VL~IG-~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~--D~~~~~-~~l- 200 (286)
..++++++||.+| +|++|..++.+|+. .|++|+++|.+++..+.+++ +|. ...+... |..+.. ...
T Consensus 136 ~~~~~g~~VlV~Ga~g~iG~~~~~~a~~--~Ga~Vi~~~~~~~~~~~~~~----~Ga---~~~~~~~~~~~~~~~~~~~~ 206 (325)
T 3jyn_A 136 YQVKPGEIILFHAAAGGVGSLACQWAKA--LGAKLIGTVSSPEKAAHAKA----LGA---WETIDYSHEDVAKRVLELTD 206 (325)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHH--HTCEEEEEESSHHHHHHHHH----HTC---SEEEETTTSCHHHHHHHHTT
T ss_pred cCCCCCCEEEEEcCCcHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHH----cCC---CEEEeCCCccHHHHHHHHhC
Confidence 3568899999999 89999999999984 78999999999999888875 452 1222211 111111 111
Q ss_pred -CCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 201 -GEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 201 -~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
.++|+||.++.. ..++...+.|+|||+++.-.
T Consensus 207 ~~g~Dvvid~~g~--------~~~~~~~~~l~~~G~iv~~g 239 (325)
T 3jyn_A 207 GKKCPVVYDGVGQ--------DTWLTSLDSVAPRGLVVSFG 239 (325)
T ss_dssp TCCEEEEEESSCG--------GGHHHHHTTEEEEEEEEECC
T ss_pred CCCceEEEECCCh--------HHHHHHHHHhcCCCEEEEEe
Confidence 369999965431 35677889999999999875
No 328
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=97.54 E-value=8.7e-05 Score=69.16 Aligned_cols=100 Identities=19% Similarity=0.194 Sum_probs=70.5
Q ss_pred hcCCCCCCEEEEeccCCChhhHHHHHhhcCCCc-EEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEc----cccchhhc
Q 042119 125 ENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTST-HFDNFDIDEAANDVARSIVASDAEFEGRMKFLTR----DIMEVKEQ 199 (286)
Q Consensus 125 ~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~-~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~----D~~~~~~~ 199 (286)
...+.++++||.+|+|++|..++.+|+. .|+ +|+++|.+++..+++++ +|. +. .+... |..+....
T Consensus 186 ~~~~~~g~~VlV~GaG~vG~~a~qla~~--~Ga~~Vi~~~~~~~~~~~~~~----lGa--~~-vi~~~~~~~~~~~~~~~ 256 (374)
T 2jhf_A 186 VAKVTQGSTCAVFGLGGVGLSVIMGCKA--AGAARIIGVDINKDKFAKAKE----VGA--TE-CVNPQDYKKPIQEVLTE 256 (374)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHH--TTCSEEEEECSCGGGHHHHHH----TTC--SE-EECGGGCSSCHHHHHHH
T ss_pred ccCCCCCCEEEEECCCHHHHHHHHHHHH--cCCCeEEEEcCCHHHHHHHHH----hCC--ce-EecccccchhHHHHHHH
Confidence 3456889999999999999999999994 688 89999999999888764 562 21 12111 11111111
Q ss_pred C--CCcceeehhhhccCChhHHHHHHHHHHhhccCC-cEEEEee
Q 042119 200 L--GEYDCIFLAALVGMSKEEKLTILGHIRKYMKDG-GILLVRS 240 (286)
Q Consensus 200 l--~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pg-g~lv~r~ 240 (286)
. +++|+||.+.-. ...++...+.|++| |++++-.
T Consensus 257 ~~~~g~D~vid~~g~-------~~~~~~~~~~l~~~~G~iv~~G 293 (374)
T 2jhf_A 257 MSNGGVDFSFEVIGR-------LDTMVTALSCCQEAYGVSVIVG 293 (374)
T ss_dssp HTTSCBSEEEECSCC-------HHHHHHHHHHBCTTTCEEEECS
T ss_pred HhCCCCcEEEECCCC-------HHHHHHHHHHhhcCCcEEEEec
Confidence 1 369999966421 13577888999999 9998754
No 329
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=97.53 E-value=5.8e-05 Score=69.68 Aligned_cols=100 Identities=14% Similarity=0.113 Sum_probs=70.4
Q ss_pred HhcCCCCCCEEEEecc-CCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCe-EEEEccccchhhc-C
Q 042119 124 SENGVVQPKKVAFVGS-GPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRM-KFLTRDIMEVKEQ-L 200 (286)
Q Consensus 124 ~~~~~~~~~~VL~IG~-G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i-~f~~~D~~~~~~~-l 200 (286)
....++++++||.+|+ |++|..++.+|+. .|++|+++|.+++..+.+++ +|. +.+ ... .|..+.... .
T Consensus 153 ~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~--~Ga~Vi~~~~~~~~~~~~~~----~ga--~~v~~~~-~~~~~~v~~~~ 223 (342)
T 4eye_A 153 RRGQLRAGETVLVLGAAGGIGTAAIQIAKG--MGAKVIAVVNRTAATEFVKS----VGA--DIVLPLE-EGWAKAVREAT 223 (342)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHH--TTCEEEEEESSGGGHHHHHH----HTC--SEEEESS-TTHHHHHHHHT
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHHH--cCCEEEEEeCCHHHHHHHHh----cCC--cEEecCc-hhHHHHHHHHh
Confidence 3455788999999998 9999999999994 78999999999999888776 462 221 111 222111111 1
Q ss_pred --CCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 201 --GEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 201 --~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
.++|+||.++.. ..++...+.|++||+++.-.
T Consensus 224 ~~~g~Dvvid~~g~--------~~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 224 GGAGVDMVVDPIGG--------PAFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp TTSCEEEEEESCC----------CHHHHHHTEEEEEEEEEC-
T ss_pred CCCCceEEEECCch--------hHHHHHHHhhcCCCEEEEEE
Confidence 269999966431 25677889999999998864
No 330
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=97.52 E-value=4.7e-05 Score=71.31 Aligned_cols=103 Identities=19% Similarity=0.302 Sum_probs=69.5
Q ss_pred CCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeehh
Q 042119 130 QPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFLA 209 (286)
Q Consensus 130 ~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~a 209 (286)
++++|+.+|+|+.|..++.+++. .|++|+.+|++++..+.+++... ..+.....+..++...+.++|+|+.+
T Consensus 166 ~~~~VlViGaGgvG~~aa~~a~~--~Ga~V~v~dr~~~r~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~DvVI~~ 237 (361)
T 1pjc_A 166 KPGKVVILGGGVVGTEAAKMAVG--LGAQVQIFDINVERLSYLETLFG------SRVELLYSNSAEIETAVAEADLLIGA 237 (361)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHG------GGSEEEECCHHHHHHHHHTCSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHh--CCCEEEEEeCCHHHHHHHHHhhC------ceeEeeeCCHHHHHHHHcCCCEEEEC
Confidence 45999999999999999998884 68899999999998888776532 22333322222333334579999977
Q ss_pred hhccCChhHHHHHHHHHHhhccCCcEEEEeec
Q 042119 210 ALVGMSKEEKLTILGHIRKYMKDGGILLVRSA 241 (286)
Q Consensus 210 alvg~~~~~k~~vl~~l~~~l~pgg~lv~r~~ 241 (286)
..+++...++ -+.+...+.|+|||+++.-..
T Consensus 238 ~~~~~~~~~~-li~~~~~~~~~~g~~ivdv~~ 268 (361)
T 1pjc_A 238 VLVPGRRAPI-LVPASLVEQMRTGSVIVDVAV 268 (361)
T ss_dssp CCCTTSSCCC-CBCHHHHTTSCTTCEEEETTC
T ss_pred CCcCCCCCCe-ecCHHHHhhCCCCCEEEEEec
Confidence 6553211111 123456678999998887653
No 331
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=97.51 E-value=8.3e-05 Score=69.19 Aligned_cols=100 Identities=18% Similarity=0.176 Sum_probs=71.0
Q ss_pred hcCCCCCCEEEEeccCCChhhHHHHHhhcCCCc-EEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEc----cccchhhc
Q 042119 125 ENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTST-HFDNFDIDEAANDVARSIVASDAEFEGRMKFLTR----DIMEVKEQ 199 (286)
Q Consensus 125 ~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~-~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~----D~~~~~~~ 199 (286)
...++++++||.+|+|++|+.++.+|+. .|+ +|+++|.+++..+++++ +|. +. .+... |..+....
T Consensus 185 ~~~~~~g~~VlV~GaG~vG~~avqla~~--~Ga~~Vi~~~~~~~~~~~~~~----lGa--~~-vi~~~~~~~~~~~~v~~ 255 (373)
T 2fzw_A 185 TAKLEPGSVCAVFGLGGVGLAVIMGCKV--AGASRIIGVDINKDKFARAKE----FGA--TE-CINPQDFSKPIQEVLIE 255 (373)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHH--HTCSEEEEECSCGGGHHHHHH----HTC--SE-EECGGGCSSCHHHHHHH
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHH--cCCCeEEEEcCCHHHHHHHHH----cCC--ce-EeccccccccHHHHHHH
Confidence 3456889999999999999999999994 688 89999999999888875 462 21 12111 11111111
Q ss_pred C--CCcceeehhhhccCChhHHHHHHHHHHhhccCC-cEEEEee
Q 042119 200 L--GEYDCIFLAALVGMSKEEKLTILGHIRKYMKDG-GILLVRS 240 (286)
Q Consensus 200 l--~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pg-g~lv~r~ 240 (286)
. +++|+||.+.-. ...++...+.|+|| |+++.-.
T Consensus 256 ~~~~g~D~vid~~g~-------~~~~~~~~~~l~~~~G~iv~~G 292 (373)
T 2fzw_A 256 MTDGGVDYSFECIGN-------VKVMRAALEACHKGWGVSVVVG 292 (373)
T ss_dssp HTTSCBSEEEECSCC-------HHHHHHHHHTBCTTTCEEEECS
T ss_pred HhCCCCCEEEECCCc-------HHHHHHHHHhhccCCcEEEEEe
Confidence 1 369999966421 13677888999999 9998764
No 332
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=97.50 E-value=4.3e-05 Score=70.30 Aligned_cols=100 Identities=7% Similarity=-0.079 Sum_probs=68.5
Q ss_pred HhcCCCCCCEEEEeccC-CChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEE--ccccch-hhc
Q 042119 124 SENGVVQPKKVAFVGSG-PMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLT--RDIMEV-KEQ 199 (286)
Q Consensus 124 ~~~~~~~~~~VL~IG~G-~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~--~D~~~~-~~~ 199 (286)
....++++++||.+|+| ++|..++.+|+. .|++|+++|.+++..+.+++ +|. ...+-. .|..+. ...
T Consensus 138 ~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~--~Ga~Vi~~~~~~~~~~~~~~----lga---~~~~~~~~~~~~~~~~~~ 208 (340)
T 3gms_A 138 ETLNLQRNDVLLVNACGSAIGHLFAQLSQI--LNFRLIAVTRNNKHTEELLR----LGA---AYVIDTSTAPLYETVMEL 208 (340)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHH--HTCEEEEEESSSTTHHHHHH----HTC---SEEEETTTSCHHHHHHHH
T ss_pred HhcccCCCCEEEEeCCccHHHHHHHHHHHH--cCCEEEEEeCCHHHHHHHHh----CCC---cEEEeCCcccHHHHHHHH
Confidence 34567899999999997 789999999984 68999999999999888876 462 222211 121111 111
Q ss_pred --CCCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 200 --LGEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 200 --l~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
-.++|+||.++-. + ......+.|+|||+++.-.
T Consensus 209 ~~~~g~Dvvid~~g~-----~---~~~~~~~~l~~~G~iv~~G 243 (340)
T 3gms_A 209 TNGIGADAAIDSIGG-----P---DGNELAFSLRPNGHFLTIG 243 (340)
T ss_dssp TTTSCEEEEEESSCH-----H---HHHHHHHTEEEEEEEEECC
T ss_pred hCCCCCcEEEECCCC-----h---hHHHHHHHhcCCCEEEEEe
Confidence 1369999966432 1 1233458999999998865
No 333
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=97.49 E-value=0.00063 Score=61.53 Aligned_cols=99 Identities=16% Similarity=0.141 Sum_probs=67.8
Q ss_pred CCEEEEeccCCChhh-HHHHHhhcCCCcEEEEEeCChHHHHHHHHHHH-------hcCCCC-------------CCeEEE
Q 042119 131 PKKVAFVGSGPMPLT-SIIMAKHHLTSTHFDNFDIDEAANDVARSIVA-------SDAEFE-------------GRMKFL 189 (286)
Q Consensus 131 ~~~VL~IG~G~lp~t-ai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~-------~~g~l~-------------~~i~f~ 189 (286)
-++|.+||+|.+|.+ +..+++ .|.+|+.+|++++.++.+++.++ +.|.+. .++++.
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~---~G~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~ 91 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAA---TGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATS 91 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH---TTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHh---CCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEEe
Confidence 368999999998874 444555 68899999999999998766433 233111 134442
Q ss_pred EccccchhhcCCCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEE
Q 042119 190 TRDIMEVKEQLGEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLV 238 (286)
Q Consensus 190 ~~D~~~~~~~l~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~ 238 (286)
.|. ...+.+.|+|+.+.- -+.+.|..+++++.+.++|+.+|+.
T Consensus 92 -~~~---~~~~~~aD~Vi~avp--~~~~~~~~v~~~l~~~~~~~~iv~s 134 (302)
T 1f0y_A 92 -TDA---ASVVHSTDLVVEAIV--ENLKVKNELFKRLDKFAAEHTIFAS 134 (302)
T ss_dssp -SCH---HHHTTSCSEEEECCC--SCHHHHHHHHHHHTTTSCTTCEEEE
T ss_pred -cCH---HHhhcCCCEEEEcCc--CcHHHHHHHHHHHHhhCCCCeEEEE
Confidence 333 224567999998742 2334578899999999999886653
No 334
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=97.48 E-value=6.5e-05 Score=69.67 Aligned_cols=99 Identities=9% Similarity=0.075 Sum_probs=68.3
Q ss_pred CCCCC------CEEEEeccCCChhhH-HHHH-hhcCCCcE-EEEEeCChH---HHHHHHHHHHhcCCCCCCeEEEEcccc
Q 042119 127 GVVQP------KKVAFVGSGPMPLTS-IIMA-KHHLTSTH-FDNFDIDEA---ANDVARSIVASDAEFEGRMKFLTRDIM 194 (286)
Q Consensus 127 ~~~~~------~~VL~IG~G~lp~ta-i~lA-~~~~~g~~-V~~iDid~~---ai~~Ar~~~~~~g~l~~~i~f~~~D~~ 194 (286)
.+.++ ++||.+|+|++|+.+ +.+| + ..|++ |+++|.+++ ..+++++ +|. +.+.+...|..
T Consensus 163 ~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k--~~Ga~~Vi~~~~~~~~~~~~~~~~~----lGa--~~v~~~~~~~~ 234 (357)
T 2b5w_A 163 YASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVD--DKGYENLYCLGRRDRPDPTIDIIEE----LDA--TYVDSRQTPVE 234 (357)
T ss_dssp HHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHC--TTCCCEEEEEECCCSSCHHHHHHHH----TTC--EEEETTTSCGG
T ss_pred CCCCCcccCCCCEEEEECCCHHHHHHHHHHHHH--HcCCcEEEEEeCCcccHHHHHHHHH----cCC--cccCCCccCHH
Confidence 34667 999999999999999 9999 8 36887 999999998 8877764 562 22211111221
Q ss_pred chhhcCCCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 195 EVKEQLGEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 195 ~~~~~l~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
++....++||+||.+.-. . ..++...+.|+|||+++.-.
T Consensus 235 ~i~~~~gg~Dvvid~~g~-----~--~~~~~~~~~l~~~G~iv~~g 273 (357)
T 2b5w_A 235 DVPDVYEQMDFIYEATGF-----P--KHAIQSVQALAPNGVGALLG 273 (357)
T ss_dssp GHHHHSCCEEEEEECSCC-----H--HHHHHHHHHEEEEEEEEECC
T ss_pred HHHHhCCCCCEEEECCCC-----h--HHHHHHHHHHhcCCEEEEEe
Confidence 111111269999965421 1 35778889999999998865
No 335
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=97.48 E-value=0.00016 Score=65.27 Aligned_cols=95 Identities=11% Similarity=0.062 Sum_probs=68.6
Q ss_pred CCCCCEEEEecc-CCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCccee
Q 042119 128 VVQPKKVAFVGS-GPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCI 206 (286)
Q Consensus 128 ~~~~~~VL~IG~-G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V 206 (286)
++++++||.+|+ |++|..++.+|+. .|++|+++|.+++..+.+++ +|. +. .+-..+..++...++++|+|
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~--~Ga~Vi~~~~~~~~~~~~~~----~ga--~~-~~~~~~~~~~~~~~~~~d~v 193 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARA--MGLRVLAAASRPEKLALPLA----LGA--EE-AATYAEVPERAKAWGGLDLV 193 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHH--TTCEEEEEESSGGGSHHHHH----TTC--SE-EEEGGGHHHHHHHTTSEEEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHh----cCC--CE-EEECCcchhHHHHhcCceEE
Confidence 788999999998 9999999999984 68999999999998887755 562 21 12111102223334679999
Q ss_pred ehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 207 FLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 207 ~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
|. + |. ..++...+.|++||+++.-.
T Consensus 194 id-~--g~------~~~~~~~~~l~~~G~~v~~g 218 (302)
T 1iz0_A 194 LE-V--RG------KEVEESLGLLAHGGRLVYIG 218 (302)
T ss_dssp EE-C--SC------TTHHHHHTTEEEEEEEEEC-
T ss_pred EE-C--CH------HHHHHHHHhhccCCEEEEEe
Confidence 96 3 32 25678889999999988754
No 336
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.44 E-value=0.00056 Score=57.00 Aligned_cols=96 Identities=14% Similarity=0.111 Sum_probs=63.7
Q ss_pred CCCEEEEeccCCChhhHHHHHhhcCC-CcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccch---hh--cCCCc
Q 042119 130 QPKKVAFVGSGPMPLTSIIMAKHHLT-STHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEV---KE--QLGEY 203 (286)
Q Consensus 130 ~~~~VL~IG~G~lp~tai~lA~~~~~-g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~---~~--~l~~f 203 (286)
.+++|+.+|+|.+|.......+. . |.+|+++|.|++.++.+++ .| +.++.+|..+. .. ...++
T Consensus 38 ~~~~v~IiG~G~~G~~~a~~L~~--~~g~~V~vid~~~~~~~~~~~----~g-----~~~~~gd~~~~~~l~~~~~~~~a 106 (183)
T 3c85_A 38 GHAQVLILGMGRIGTGAYDELRA--RYGKISLGIEIREEAAQQHRS----EG-----RNVISGDATDPDFWERILDTGHV 106 (183)
T ss_dssp TTCSEEEECCSHHHHHHHHHHHH--HHCSCEEEEESCHHHHHHHHH----TT-----CCEEECCTTCHHHHHTBCSCCCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHh--ccCCeEEEEECCHHHHHHHHH----CC-----CCEEEcCCCCHHHHHhccCCCCC
Confidence 35799999999888765554442 5 7899999999988766543 45 34667787542 12 25679
Q ss_pred ceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 204 DCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 204 D~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
|+|+.+.- + ......+-...+.+.|++.++++.
T Consensus 107 d~vi~~~~---~-~~~~~~~~~~~~~~~~~~~ii~~~ 139 (183)
T 3c85_A 107 KLVLLAMP---H-HQGNQTALEQLQRRNYKGQIAAIA 139 (183)
T ss_dssp CEEEECCS---S-HHHHHHHHHHHHHTTCCSEEEEEE
T ss_pred CEEEEeCC---C-hHHHHHHHHHHHHHCCCCEEEEEE
Confidence 99986532 1 122223334566778888888875
No 337
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=97.43 E-value=0.00025 Score=65.30 Aligned_cols=104 Identities=15% Similarity=0.172 Sum_probs=71.9
Q ss_pred HHHHhcCCCCCCEEEEecc-CCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEc---cccch
Q 042119 121 TILSENGVVQPKKVAFVGS-GPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTR---DIMEV 196 (286)
Q Consensus 121 ~~l~~~~~~~~~~VL~IG~-G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~---D~~~~ 196 (286)
.++.+..+.++++||.+|+ |++|..++.+|+. .|++|+++|.+++..+.+++ +|. ...+-.. |..+.
T Consensus 160 ~~l~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~--~Ga~V~~~~~~~~~~~~~~~----~g~---~~~~d~~~~~~~~~~ 230 (347)
T 2hcy_A 160 KALKSANLMAGHWVAISGAAGGLGSLAVQYAKA--MGYRVLGIDGGEGKEELFRS----IGG---EVFIDFTKEKDIVGA 230 (347)
T ss_dssp HHHHTTTCCTTCEEEEETTTSHHHHHHHHHHHH--TTCEEEEEECSTTHHHHHHH----TTC---CEEEETTTCSCHHHH
T ss_pred HHHHhcCCCCCCEEEEECCCchHHHHHHHHHHH--CCCcEEEEcCCHHHHHHHHH----cCC---ceEEecCccHhHHHH
Confidence 4455556788999999999 7889988888884 68999999999998877665 462 2222111 11111
Q ss_pred hhcC--CCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 197 KEQL--GEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 197 ~~~l--~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
.... +++|+|+.++.. ...++...+.|++||+++.-.
T Consensus 231 ~~~~~~~~~D~vi~~~g~-------~~~~~~~~~~l~~~G~iv~~g 269 (347)
T 2hcy_A 231 VLKATDGGAHGVINVSVS-------EAAIEASTRYVRANGTTVLVG 269 (347)
T ss_dssp HHHHHTSCEEEEEECSSC-------HHHHHHHTTSEEEEEEEEECC
T ss_pred HHHHhCCCCCEEEECCCc-------HHHHHHHHHHHhcCCEEEEEe
Confidence 1111 269999866431 146788899999999998765
No 338
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=97.43 E-value=0.00014 Score=66.96 Aligned_cols=97 Identities=14% Similarity=0.067 Sum_probs=68.9
Q ss_pred CCCCCCEEEEecc-CCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEc--cccc-hhhc--C
Q 042119 127 GVVQPKKVAFVGS-GPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTR--DIME-VKEQ--L 200 (286)
Q Consensus 127 ~~~~~~~VL~IG~-G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~--D~~~-~~~~--l 200 (286)
.+.++++||.+|+ |++|..++.+|+. .|++|+++|.+++..+.+++ +|. + ..+-.. |..+ +... -
T Consensus 163 ~~~~g~~vlV~Gasg~iG~~~~~~a~~--~G~~Vi~~~~~~~~~~~~~~----~ga--~-~~~d~~~~~~~~~~~~~~~~ 233 (343)
T 2eih_A 163 GVRPGDDVLVMAAGSGVSVAAIQIAKL--FGARVIATAGSEDKLRRAKA----LGA--D-ETVNYTHPDWPKEVRRLTGG 233 (343)
T ss_dssp CCCTTCEEEECSTTSTTHHHHHHHHHH--TTCEEEEEESSHHHHHHHHH----HTC--S-EEEETTSTTHHHHHHHHTTT
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHh----cCC--C-EEEcCCcccHHHHHHHHhCC
Confidence 5688999999999 9999999999984 68999999999999888865 462 2 112111 1111 1111 1
Q ss_pred CCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 201 GEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 201 ~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
.++|+|+.++- + ..++...+.|++||+++.-.
T Consensus 234 ~~~d~vi~~~g-~-------~~~~~~~~~l~~~G~~v~~g 265 (343)
T 2eih_A 234 KGADKVVDHTG-A-------LYFEGVIKATANGGRIAIAG 265 (343)
T ss_dssp TCEEEEEESSC-S-------SSHHHHHHHEEEEEEEEESS
T ss_pred CCceEEEECCC-H-------HHHHHHHHhhccCCEEEEEe
Confidence 36999996643 2 24667888999999998865
No 339
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=97.43 E-value=0.00011 Score=68.05 Aligned_cols=101 Identities=12% Similarity=0.099 Sum_probs=70.2
Q ss_pred hcCCCCCCEEEEe-ccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhc--CC
Q 042119 125 ENGVVQPKKVAFV-GSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQ--LG 201 (286)
Q Consensus 125 ~~~~~~~~~VL~I-G~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~--l~ 201 (286)
...++++++||.+ |+|++|..++.+|+. .|++|+++|.+++..+.+++ +|. ..-+.....|..+.... -.
T Consensus 162 ~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~--~Ga~Vi~~~~~~~~~~~~~~----lGa-~~~~~~~~~~~~~~~~~~~~~ 234 (353)
T 4dup_A 162 MAGLTEGESVLIHGGTSGIGTTAIQLARA--FGAEVYATAGSTGKCEACER----LGA-KRGINYRSEDFAAVIKAETGQ 234 (353)
T ss_dssp TTCCCTTCEEEESSTTSHHHHHHHHHHHH--TTCEEEEEESSHHHHHHHHH----HTC-SEEEETTTSCHHHHHHHHHSS
T ss_pred hcCCCCCCEEEEEcCCCHHHHHHHHHHHH--cCCEEEEEeCCHHHHHHHHh----cCC-CEEEeCCchHHHHHHHHHhCC
Confidence 4456899999999 689999999999984 79999999999999888876 452 11111111111111111 23
Q ss_pred CcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 202 EYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 202 ~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
++|+||.++-. ..++...+.|++||+++.-.
T Consensus 235 g~Dvvid~~g~--------~~~~~~~~~l~~~G~iv~~g 265 (353)
T 4dup_A 235 GVDIILDMIGA--------AYFERNIASLAKDGCLSIIA 265 (353)
T ss_dssp CEEEEEESCCG--------GGHHHHHHTEEEEEEEEECC
T ss_pred CceEEEECCCH--------HHHHHHHHHhccCCEEEEEE
Confidence 69999966431 15677888999999998865
No 340
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=97.43 E-value=0.00014 Score=67.12 Aligned_cols=99 Identities=13% Similarity=0.101 Sum_probs=69.5
Q ss_pred HhcCCCCCCEEEEec-cCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhh---c
Q 042119 124 SENGVVQPKKVAFVG-SGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKE---Q 199 (286)
Q Consensus 124 ~~~~~~~~~~VL~IG-~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~---~ 199 (286)
.+..+.++++||.+| +|++|+.++.+|+. .|++|+++ .+++..+.+++ +| ... +. ...|..+... .
T Consensus 144 ~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~--~Ga~Vi~~-~~~~~~~~~~~----lG-a~~-i~-~~~~~~~~~~~~~~ 213 (343)
T 3gaz_A 144 DRAQVQDGQTVLIQGGGGGVGHVAIQIALA--RGARVFAT-ARGSDLEYVRD----LG-ATP-ID-ASREPEDYAAEHTA 213 (343)
T ss_dssp TTTCCCTTCEEEEETTTSHHHHHHHHHHHH--TTCEEEEE-ECHHHHHHHHH----HT-SEE-EE-TTSCHHHHHHHHHT
T ss_pred HhcCCCCCCEEEEecCCCHHHHHHHHHHHH--CCCEEEEE-eCHHHHHHHHH----cC-CCE-ec-cCCCHHHHHHHHhc
Confidence 345568899999999 79999999999994 78999999 88888777655 56 222 22 1112111111 1
Q ss_pred CCCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 200 LGEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 200 l~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
-.++|+||.++ | . ..++...+.|+|||.++.-.
T Consensus 214 ~~g~D~vid~~--g----~--~~~~~~~~~l~~~G~iv~~g 246 (343)
T 3gaz_A 214 GQGFDLVYDTL--G----G--PVLDASFSAVKRFGHVVSCL 246 (343)
T ss_dssp TSCEEEEEESS--C----T--HHHHHHHHHEEEEEEEEESC
T ss_pred CCCceEEEECC--C----c--HHHHHHHHHHhcCCeEEEEc
Confidence 13699999654 3 1 36778888999999998754
No 341
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.42 E-value=0.00016 Score=67.47 Aligned_cols=77 Identities=18% Similarity=0.147 Sum_probs=58.8
Q ss_pred CCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhh---c--CC
Q 042119 127 GVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKE---Q--LG 201 (286)
Q Consensus 127 ~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~---~--l~ 201 (286)
.+.++..++|..+|.+|-|...+.+ ..++++|+|+|+||+|++.|+++ . .+|++++.++..++.. . +.
T Consensus 54 ~i~pggiyVD~TlG~GGHS~~iL~~-lg~~GrVig~D~Dp~Al~~A~rL----~--~~Rv~lv~~nF~~l~~~L~~~g~~ 126 (347)
T 3tka_A 54 NIRPDGIYIDGTFGRGGHSRLILSQ-LGEEGRLLAIDRDPQAIAVAKTI----D--DPRFSIIHGPFSALGEYVAERDLI 126 (347)
T ss_dssp CCCTTCEEEESCCTTSHHHHHHHTT-CCTTCEEEEEESCHHHHHHHTTC----C--CTTEEEEESCGGGHHHHHHHTTCT
T ss_pred CCCCCCEEEEeCcCCCHHHHHHHHh-CCCCCEEEEEECCHHHHHHHHhh----c--CCcEEEEeCCHHHHHHHHHhcCCC
Confidence 5688999999999987777655543 55789999999999999999532 2 3799999999877643 2 22
Q ss_pred -Ccceeehhh
Q 042119 202 -EYDCIFLAA 210 (286)
Q Consensus 202 -~fD~V~~aa 210 (286)
.+|.|+++-
T Consensus 127 ~~vDgILfDL 136 (347)
T 3tka_A 127 GKIDGILLDL 136 (347)
T ss_dssp TCEEEEEEEC
T ss_pred CcccEEEECC
Confidence 478876654
No 342
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=97.42 E-value=0.00018 Score=66.36 Aligned_cols=94 Identities=10% Similarity=0.088 Sum_probs=67.0
Q ss_pred CCCEEEEe-ccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEE-ccccchhh--cCCCcce
Q 042119 130 QPKKVAFV-GSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLT-RDIMEVKE--QLGEYDC 205 (286)
Q Consensus 130 ~~~~VL~I-G~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~-~D~~~~~~--~l~~fD~ 205 (286)
++++||.+ |+|++|+.++.+|+. .|++|+++|.+++..+.+++ +|. +.+ +.. .|..+... .-.+||+
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~--~Ga~Vi~~~~~~~~~~~~~~----lGa--~~v-i~~~~~~~~~~~~~~~~g~Dv 220 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKA--YGLRVITTASRNETIEWTKK----MGA--DIV-LNHKESLLNQFKTQGIELVDY 220 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHH--TTCEEEEECCSHHHHHHHHH----HTC--SEE-ECTTSCHHHHHHHHTCCCEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHH--cCCEEEEEeCCHHHHHHHHh----cCC--cEE-EECCccHHHHHHHhCCCCccE
Confidence 78999999 799999999999994 78999999999999888877 452 211 111 11111111 1236999
Q ss_pred eehhhhccCChhHHHHHHHHHHhhccCCcEEEEe
Q 042119 206 IFLAALVGMSKEEKLTILGHIRKYMKDGGILLVR 239 (286)
Q Consensus 206 V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r 239 (286)
||.+.- -...++...+.|+|||+++.-
T Consensus 221 v~d~~g-------~~~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 221 VFCTFN-------TDMYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp EEESSC-------HHHHHHHHHHHEEEEEEEEES
T ss_pred EEECCC-------chHHHHHHHHHhccCCEEEEE
Confidence 996542 124667888999999999764
No 343
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=97.39 E-value=0.00013 Score=68.34 Aligned_cols=103 Identities=18% Similarity=0.266 Sum_probs=68.3
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeeh
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFL 208 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~ 208 (286)
-++++|+.+|+|++|..+..+++. .|++|+++|++++..+.+++. .| ..+.....+..++...+.++|+|+.
T Consensus 164 l~~~~V~ViGaG~iG~~~a~~l~~--~Ga~V~~~d~~~~~~~~~~~~---~g---~~~~~~~~~~~~l~~~~~~~DvVi~ 235 (369)
T 2eez_A 164 VAPASVVILGGGTVGTNAAKIALG--MGAQVTILDVNHKRLQYLDDV---FG---GRVITLTATEANIKKSVQHADLLIG 235 (369)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHH---TT---TSEEEEECCHHHHHHHHHHCSEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHh--CCCEEEEEECCHHHHHHHHHh---cC---ceEEEecCCHHHHHHHHhCCCEEEE
Confidence 356999999999999988888874 789999999999887766543 45 2343333333333333357899987
Q ss_pred hhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 209 AALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 209 aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
++..... ....-+.+...+.|+|||+++.-+
T Consensus 236 ~~g~~~~-~~~~li~~~~l~~mk~gg~iV~v~ 266 (369)
T 2eez_A 236 AVLVPGA-KAPKLVTRDMLSLMKEGAVIVDVA 266 (369)
T ss_dssp CCC--------CCSCHHHHTTSCTTCEEEECC
T ss_pred CCCCCcc-ccchhHHHHHHHhhcCCCEEEEEe
Confidence 6544210 111113567788999999988765
No 344
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=97.38 E-value=0.0005 Score=61.82 Aligned_cols=99 Identities=16% Similarity=0.241 Sum_probs=69.2
Q ss_pred CEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhc---------CCCC--------CCeEEEEcccc
Q 042119 132 KKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASD---------AEFE--------GRMKFLTRDIM 194 (286)
Q Consensus 132 ~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~---------g~l~--------~~i~f~~~D~~ 194 (286)
++|.+||+|.+|........ ..|.+|+.+|++++.++.+++.+.+. + +. .++++ +.|.
T Consensus 5 ~kV~VIGaG~mG~~iA~~la--~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~-~~~~~~~~~~~~i~~-~~~~- 79 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTA--FHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAG-AADGAAQKALGGIRY-SDDL- 79 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHH--HTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTT-CTTTHHHHHHHHCEE-ESCH-
T ss_pred CEEEEECCCHHHHHHHHHHH--hCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhccc-CCHHHHHHHHcCeEE-eCCH-
Confidence 68999999998876443333 26899999999999999888764321 1 11 12343 2333
Q ss_pred chhhcCCCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEe
Q 042119 195 EVKEQLGEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVR 239 (286)
Q Consensus 195 ~~~~~l~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r 239 (286)
...+.+.|+|+.+.. .+.+.|..+++++.+.++|+.+++-.
T Consensus 80 --~~~~~~aDlVi~av~--~~~~~~~~v~~~l~~~~~~~~il~s~ 120 (283)
T 4e12_A 80 --AQAVKDADLVIEAVP--ESLDLKRDIYTKLGELAPAKTIFATN 120 (283)
T ss_dssp --HHHTTTCSEEEECCC--SCHHHHHHHHHHHHHHSCTTCEEEEC
T ss_pred --HHHhccCCEEEEecc--CcHHHHHHHHHHHHhhCCCCcEEEEC
Confidence 223467999998743 34458889999999999999887643
No 345
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=97.38 E-value=0.00011 Score=66.76 Aligned_cols=98 Identities=14% Similarity=0.224 Sum_probs=68.4
Q ss_pred hcCCCCCC-EEEEecc-CCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcC--
Q 042119 125 ENGVVQPK-KVAFVGS-GPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQL-- 200 (286)
Q Consensus 125 ~~~~~~~~-~VL~IG~-G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l-- 200 (286)
+.+..+++ +||.+|+ |++|+.++.+|+. .|++|+++|.+++..+++++ +|. + -.+-..|... ...+
T Consensus 140 ~~~~~~~~g~VlV~Ga~G~vG~~aiqla~~--~Ga~Vi~~~~~~~~~~~~~~----lGa--~-~vi~~~~~~~-~~~~~~ 209 (324)
T 3nx4_A 140 DAGIRPQDGEVVVTGASGGVGSTAVALLHK--LGYQVAAVSGRESTHGYLKS----LGA--N-RILSRDEFAE-SRPLEK 209 (324)
T ss_dssp HTTCCGGGCCEEESSTTSHHHHHHHHHHHH--TTCCEEEEESCGGGHHHHHH----HTC--S-EEEEGGGSSC-CCSSCC
T ss_pred hcccCCCCCeEEEECCCcHHHHHHHHHHHH--cCCEEEEEeCCHHHHHHHHh----cCC--C-EEEecCCHHH-HHhhcC
Confidence 44444422 4999998 9999999999994 78999999999999888876 462 2 1222222111 1111
Q ss_pred CCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 201 GEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 201 ~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
+++|+||.+. | . ..++...+.|+|||+++.-.
T Consensus 210 ~~~d~v~d~~--g----~--~~~~~~~~~l~~~G~iv~~G 241 (324)
T 3nx4_A 210 QLWAGAIDTV--G----D--KVLAKVLAQMNYGGCVAACG 241 (324)
T ss_dssp CCEEEEEESS--C----H--HHHHHHHHTEEEEEEEEECC
T ss_pred CCccEEEECC--C----c--HHHHHHHHHHhcCCEEEEEe
Confidence 3699988653 2 1 27888999999999998865
No 346
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=97.38 E-value=0.00016 Score=67.44 Aligned_cols=99 Identities=15% Similarity=0.128 Sum_probs=65.8
Q ss_pred CCCCCEEEEec-cCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCccee
Q 042119 128 VVQPKKVAFVG-SGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCI 206 (286)
Q Consensus 128 ~~~~~~VL~IG-~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V 206 (286)
+.++++||..| +|++|..++.+|+. .|++|++++ +++..+.++ ++|. ..-+.....|..+......++|+|
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~--~Ga~Vi~~~-~~~~~~~~~----~lGa-~~v~~~~~~~~~~~~~~~~g~D~v 252 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKA--WDAHVTAVC-SQDASELVR----KLGA-DDVIDYKSGSVEEQLKSLKPFDFI 252 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHH--TTCEEEEEE-CGGGHHHHH----HTTC-SEEEETTSSCHHHHHHTSCCBSEE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHh--CCCEEEEEe-ChHHHHHHH----HcCC-CEEEECCchHHHHHHhhcCCCCEE
Confidence 67899999999 79999999999994 689999999 677666554 4672 111111111221112223579999
Q ss_pred ehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 207 FLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 207 ~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
|.++-. . ...++...+.+++||+++.-.
T Consensus 253 id~~g~-----~-~~~~~~~~~~l~~~G~iv~~g 280 (375)
T 2vn8_A 253 LDNVGG-----S-TETWAPDFLKKWSGATYVTLV 280 (375)
T ss_dssp EESSCT-----T-HHHHGGGGBCSSSCCEEEESC
T ss_pred EECCCC-----h-hhhhHHHHHhhcCCcEEEEeC
Confidence 966431 1 124566778899999998754
No 347
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=97.38 E-value=0.00027 Score=64.77 Aligned_cols=100 Identities=13% Similarity=0.028 Sum_probs=69.9
Q ss_pred hcCCCCCCEEEEecc-CCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEc---cccchhhcC
Q 042119 125 ENGVVQPKKVAFVGS-GPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTR---DIMEVKEQL 200 (286)
Q Consensus 125 ~~~~~~~~~VL~IG~-G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~---D~~~~~~~l 200 (286)
...+.++++||.+|+ |++|..++.+|+. .|++|+++|.+++..+.+++ ++|. ...+-.. |..+.....
T Consensus 150 ~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~--~G~~V~~~~~~~~~~~~~~~---~~g~---~~~~d~~~~~~~~~~~~~~ 221 (345)
T 2j3h_A 150 VCSPKEGETVYVSAASGAVGQLVGQLAKM--MGCYVVGSAGSKEKVDLLKT---KFGF---DDAFNYKEESDLTAALKRC 221 (345)
T ss_dssp TSCCCTTCEEEESSTTSHHHHHHHHHHHH--TTCEEEEEESSHHHHHHHHH---TSCC---SEEEETTSCSCSHHHHHHH
T ss_pred HhCCCCCCEEEEECCCcHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHH---HcCC---ceEEecCCHHHHHHHHHHH
Confidence 346788999999996 9899999999984 78999999999988877763 3562 2222111 111111111
Q ss_pred --CCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 201 --GEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 201 --~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
+++|+|+.++- . ..++...+.|+|||++++-.
T Consensus 222 ~~~~~d~vi~~~g------~--~~~~~~~~~l~~~G~~v~~G 255 (345)
T 2j3h_A 222 FPNGIDIYFENVG------G--KMLDAVLVNMNMHGRIAVCG 255 (345)
T ss_dssp CTTCEEEEEESSC------H--HHHHHHHTTEEEEEEEEECC
T ss_pred hCCCCcEEEECCC------H--HHHHHHHHHHhcCCEEEEEc
Confidence 36999986542 1 36788899999999998754
No 348
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=97.38 E-value=0.0001 Score=67.99 Aligned_cols=105 Identities=13% Similarity=0.146 Sum_probs=72.5
Q ss_pred HHHHhcCCCCCCEEEEeccC-CChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEcccc--c-h
Q 042119 121 TILSENGVVQPKKVAFVGSG-PMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIM--E-V 196 (286)
Q Consensus 121 ~~l~~~~~~~~~~VL~IG~G-~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~--~-~ 196 (286)
.++.+..++++++||.+|+| ++|..++.+|+. ..|++|+++|.+++..+.+++ +|. ...+...|.. + +
T Consensus 161 ~~l~~~~~~~g~~vlV~Gagg~iG~~~~~~a~~-~~Ga~Vi~~~~~~~~~~~~~~----~g~---~~~~~~~~~~~~~~~ 232 (347)
T 1jvb_A 161 RAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKA-VSGATIIGVDVREEAVEAAKR----AGA---DYVINASMQDPLAEI 232 (347)
T ss_dssp HHHHHTTCCTTCEEEEETTTSHHHHHHHHHHHH-HTCCEEEEEESSHHHHHHHHH----HTC---SEEEETTTSCHHHHH
T ss_pred HHHHhcCCCCCCEEEEECCCccHHHHHHHHHHH-cCCCeEEEEcCCHHHHHHHHH----hCC---CEEecCCCccHHHHH
Confidence 34455667899999999999 889989999884 228999999999999888765 452 2222222210 0 1
Q ss_pred hhcC--CCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 197 KEQL--GEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 197 ~~~l--~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
.... +.+|+||.++-. ...++...+.|+|||+++.-.
T Consensus 233 ~~~~~~~~~d~vi~~~g~-------~~~~~~~~~~l~~~G~iv~~g 271 (347)
T 1jvb_A 233 RRITESKGVDAVIDLNNS-------EKTLSVYPKALAKQGKYVMVG 271 (347)
T ss_dssp HHHTTTSCEEEEEESCCC-------HHHHTTGGGGEEEEEEEEECC
T ss_pred HHHhcCCCceEEEECCCC-------HHHHHHHHHHHhcCCEEEEEC
Confidence 1111 379999966431 136778889999999998864
No 349
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=97.35 E-value=0.00016 Score=66.08 Aligned_cols=99 Identities=18% Similarity=0.170 Sum_probs=68.8
Q ss_pred hcCCCCCCEEEEecc-CCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEcc---ccchhhc-
Q 042119 125 ENGVVQPKKVAFVGS-GPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRD---IMEVKEQ- 199 (286)
Q Consensus 125 ~~~~~~~~~VL~IG~-G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D---~~~~~~~- 199 (286)
...+.++++||..|+ |++|..++.+++. .|++|+++|.+++..+.+++ +| . ...+-..| ..+....
T Consensus 140 ~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~--~G~~V~~~~~~~~~~~~~~~----~g-~--~~~~d~~~~~~~~~~~~~~ 210 (333)
T 1v3u_A 140 VCGVKGGETVLVSAAAGAVGSVVGQIAKL--KGCKVVGAAGSDEKIAYLKQ----IG-F--DAAFNYKTVNSLEEALKKA 210 (333)
T ss_dssp TSCCCSSCEEEEESTTBHHHHHHHHHHHH--TTCEEEEEESSHHHHHHHHH----TT-C--SEEEETTSCSCHHHHHHHH
T ss_pred hhCCCCCCEEEEecCCCcHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHh----cC-C--cEEEecCCHHHHHHHHHHH
Confidence 346788999999997 8899998888884 78999999999988877743 46 2 22222122 1111111
Q ss_pred -CCCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 200 -LGEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 200 -l~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
-+++|+|+.++- . ..++...+.|+|||++++-.
T Consensus 211 ~~~~~d~vi~~~g------~--~~~~~~~~~l~~~G~~v~~g 244 (333)
T 1v3u_A 211 SPDGYDCYFDNVG------G--EFLNTVLSQMKDFGKIAICG 244 (333)
T ss_dssp CTTCEEEEEESSC------H--HHHHHHHTTEEEEEEEEECC
T ss_pred hCCCCeEEEECCC------h--HHHHHHHHHHhcCCEEEEEe
Confidence 136999986643 1 24778889999999998764
No 350
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=97.33 E-value=0.00013 Score=69.99 Aligned_cols=100 Identities=15% Similarity=0.167 Sum_probs=70.4
Q ss_pred cCCCCCCEEEEecc-CCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccc-----------
Q 042119 126 NGVVQPKKVAFVGS-GPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDI----------- 193 (286)
Q Consensus 126 ~~~~~~~~VL~IG~-G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~----------- 193 (286)
..++++++||.+|+ |++|+.++.+|+. .|++|++++.+++..+.+++ +|. ..-+.+...|.
T Consensus 224 ~~~~~g~~VlV~GasG~vG~~avqlak~--~Ga~vi~~~~~~~~~~~~~~----lGa-~~vi~~~~~d~~~~~~~~~~~~ 296 (456)
T 3krt_A 224 AGMKQGDNVLIWGASGGLGSYATQFALA--GGANPICVVSSPQKAEICRA----MGA-EAIIDRNAEGYRFWKDENTQDP 296 (456)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHH--TTCEEEEEESSHHHHHHHHH----HTC-CEEEETTTTTCCSEEETTEECH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHH--cCCeEEEEECCHHHHHHHHh----hCC-cEEEecCcCcccccccccccch
Confidence 45689999999998 9999999999994 79999999999999888866 462 11111111111
Q ss_pred -------cchhh--cCCCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 194 -------MEVKE--QLGEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 194 -------~~~~~--~l~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
..+.. .-.++|+||.+. | . ..++...+.|+|||+++.-.
T Consensus 297 ~~~~~~~~~i~~~t~g~g~Dvvid~~--G----~--~~~~~~~~~l~~~G~iv~~G 344 (456)
T 3krt_A 297 KEWKRFGKRIRELTGGEDIDIVFEHP--G----R--ETFGASVFVTRKGGTITTCA 344 (456)
T ss_dssp HHHHHHHHHHHHHHTSCCEEEEEECS--C----H--HHHHHHHHHEEEEEEEEESC
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEcC--C----c--hhHHHHHHHhhCCcEEEEEe
Confidence 11111 113799999654 2 2 46778889999999998854
No 351
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=97.32 E-value=0.00016 Score=66.92 Aligned_cols=108 Identities=10% Similarity=0.017 Sum_probs=68.2
Q ss_pred HHHhc-CCCCC-CEEEEecc-CCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEE---ccccc
Q 042119 122 ILSEN-GVVQP-KKVAFVGS-GPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLT---RDIME 195 (286)
Q Consensus 122 ~l~~~-~~~~~-~~VL~IG~-G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~---~D~~~ 195 (286)
++.+. .++++ ++||.+|+ |++|+.++.+|+. .|++|+++..+++..+..++.++++|. ..-+.... .|..+
T Consensus 157 ~l~~~~~~~~g~~~VlV~Ga~G~vG~~aiqlak~--~Ga~vi~~~~~~~~~~~~~~~~~~lGa-~~vi~~~~~~~~~~~~ 233 (364)
T 1gu7_A 157 MLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKL--LNFNSISVIRDRPNLDEVVASLKELGA-TQVITEDQNNSREFGP 233 (364)
T ss_dssp HHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHH--HTCEEEEEECCCTTHHHHHHHHHHHTC-SEEEEHHHHHCGGGHH
T ss_pred HHHHhhccCCCCcEEEECCCCcHHHHHHHHHHHH--CCCEEEEEecCccccHHHHHHHHhcCC-eEEEecCccchHHHHH
Confidence 44443 56788 99999997 9999999999994 689999998776653333344456772 21122111 12211
Q ss_pred hhh-----cCCCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 196 VKE-----QLGEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 196 ~~~-----~l~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
... .-.++|+||.+.- .. ... ...+.|++||+++.-.
T Consensus 234 ~i~~~t~~~~~g~Dvvid~~G-----~~--~~~-~~~~~l~~~G~~v~~g 275 (364)
T 1gu7_A 234 TIKEWIKQSGGEAKLALNCVG-----GK--SST-GIARKLNNNGLMLTYG 275 (364)
T ss_dssp HHHHHHHHHTCCEEEEEESSC-----HH--HHH-HHHHTSCTTCEEEECC
T ss_pred HHHHHhhccCCCceEEEECCC-----ch--hHH-HHHHHhccCCEEEEec
Confidence 111 1237999996642 11 123 5678999999998754
No 352
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=97.32 E-value=0.0003 Score=67.07 Aligned_cols=100 Identities=16% Similarity=0.065 Sum_probs=70.1
Q ss_pred cCCCCCCEEEEecc-CCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccc-----------
Q 042119 126 NGVVQPKKVAFVGS-GPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDI----------- 193 (286)
Q Consensus 126 ~~~~~~~~VL~IG~-G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~----------- 193 (286)
..+.++++||..|+ |++|+.++.+|+. .|++|++++.+++..+.+++ +|. ..-+.....|.
T Consensus 216 ~~~~~g~~VlV~GasG~iG~~a~qla~~--~Ga~vi~~~~~~~~~~~~~~----lGa-~~~i~~~~~~~~~~~~~~~~~~ 288 (447)
T 4a0s_A 216 AQMKQGDIVLIWGASGGLGSYAIQFVKN--GGGIPVAVVSSAQKEAAVRA----LGC-DLVINRAELGITDDIADDPRRV 288 (447)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHH--TTCEEEEEESSHHHHHHHHH----TTC-CCEEEHHHHTCCTTGGGCHHHH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHH--cCCEEEEEeCCHHHHHHHHh----cCC-CEEEeccccccccccccccccc
Confidence 56789999999997 9999999999994 79999999999998888754 562 22111111111
Q ss_pred --------cchhhc-CCCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 194 --------MEVKEQ-LGEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 194 --------~~~~~~-l~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
..+... -.++|+||.++- . ..++...+.|++||+++.-.
T Consensus 289 ~~~~~~~~~~v~~~~g~g~Dvvid~~G------~--~~~~~~~~~l~~~G~iv~~G 336 (447)
T 4a0s_A 289 VETGRKLAKLVVEKAGREPDIVFEHTG------R--VTFGLSVIVARRGGTVVTCG 336 (447)
T ss_dssp HHHHHHHHHHHHHHHSSCCSEEEECSC------H--HHHHHHHHHSCTTCEEEESC
T ss_pred chhhhHHHHHHHHHhCCCceEEEECCC------c--hHHHHHHHHHhcCCEEEEEe
Confidence 011111 136999996542 1 25678888999999998864
No 353
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=97.32 E-value=0.00057 Score=62.01 Aligned_cols=112 Identities=13% Similarity=0.092 Sum_probs=64.3
Q ss_pred hcCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcc
Q 042119 125 ENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYD 204 (286)
Q Consensus 125 ~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD 204 (286)
+....++.+|||+||||+|.|-....+ .+-..|+++|+.-+.....+.. ...| .++.+..+++......-..||
T Consensus 69 k~~l~~~~~VLDLGaAPGGWSQvAa~~--~~~~~v~g~dVGvDl~~~pi~~-~~~g---~~ii~~~~~~dv~~l~~~~~D 142 (277)
T 3evf_A 69 RGYVKLEGRVIDLGCGRGGWCYYAAAQ--KEVSGVKGFTLGRDGHEKPMNV-QSLG---WNIITFKDKTDIHRLEPVKCD 142 (277)
T ss_dssp TTSSCCCEEEEEETCTTCHHHHHHHTS--TTEEEEEEECCCCTTCCCCCCC-CBTT---GGGEEEECSCCTTTSCCCCCS
T ss_pred hCCCCCCCEEEEecCCCCHHHHHHHHh--cCCCcceeEEEeccCccccccc-CcCC---CCeEEEeccceehhcCCCCcc
Confidence 345678889999999999988554433 2345788888874321000000 0012 134445555422222224799
Q ss_pred eeehhhh--ccCChhHH---HHHHHHHHhhccCC-cEEEEeecC
Q 042119 205 CIFLAAL--VGMSKEEK---LTILGHIRKYMKDG-GILLVRSAK 242 (286)
Q Consensus 205 ~V~~aal--vg~~~~~k---~~vl~~l~~~l~pg-g~lv~r~~~ 242 (286)
+|+.+.. .|...-+- ..+++.+.+.|+|| |.+++.-..
T Consensus 143 lVlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~ 186 (277)
T 3evf_A 143 TLLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLA 186 (277)
T ss_dssp EEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred EEEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecC
Confidence 9986532 12211111 23567788999999 999997544
No 354
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=97.31 E-value=0.00014 Score=66.30 Aligned_cols=100 Identities=17% Similarity=0.170 Sum_probs=66.8
Q ss_pred hcCCCCCC-EEEEecc-CCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcC--
Q 042119 125 ENGVVQPK-KVAFVGS-GPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQL-- 200 (286)
Q Consensus 125 ~~~~~~~~-~VL~IG~-G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l-- 200 (286)
+..+.+++ +||.+|+ |++|..++.+|+. .|++|+++|.+++..+.+++ +|. ..-+.....| .+....+
T Consensus 143 ~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~--~Ga~vi~~~~~~~~~~~~~~----lGa-~~~i~~~~~~-~~~~~~~~~ 214 (328)
T 1xa0_A 143 EHGLTPERGPVLVTGATGGVGSLAVSMLAK--RGYTVEASTGKAAEHDYLRV----LGA-KEVLAREDVM-AERIRPLDK 214 (328)
T ss_dssp HTTCCGGGCCEEESSTTSHHHHHHHHHHHH--TTCCEEEEESCTTCHHHHHH----TTC-SEEEECC----------CCS
T ss_pred hcCCCCCCceEEEecCCCHHHHHHHHHHHH--CCCEEEEEECCHHHHHHHHH----cCC-cEEEecCCcH-HHHHHHhcC
Confidence 34566665 8999997 9999999999994 68999999999988887765 562 2111111111 1111111
Q ss_pred CCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 201 GEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 201 ~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
.++|+||.+. |. ..++...+.+++||+++.-.
T Consensus 215 ~~~d~vid~~--g~------~~~~~~~~~l~~~G~~v~~G 246 (328)
T 1xa0_A 215 QRWAAAVDPV--GG------RTLATVLSRMRYGGAVAVSG 246 (328)
T ss_dssp CCEEEEEECS--TT------TTHHHHHHTEEEEEEEEECS
T ss_pred CcccEEEECC--cH------HHHHHHHHhhccCCEEEEEe
Confidence 3699998654 21 14667888999999998764
No 355
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=97.31 E-value=0.00042 Score=56.44 Aligned_cols=98 Identities=15% Similarity=0.114 Sum_probs=63.9
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchh--h--cCCCcc
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVK--E--QLGEYD 204 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~--~--~l~~fD 204 (286)
.++++|+.+|+|++|.......+. .|.+|+.+|.+++.++.+++ ..| ..++.+|..+.. . ...++|
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~--~g~~V~vid~~~~~~~~~~~---~~g-----~~~~~~d~~~~~~l~~~~~~~ad 86 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASS--SGHSVVVVDKNEYAFHRLNS---EFS-----GFTVVGDAAEFETLKECGMEKAD 86 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESCGGGGGGSCT---TCC-----SEEEESCTTSHHHHHTTTGGGCS
T ss_pred cCCCcEEEECCCHHHHHHHHHHHh--CCCeEEEEECCHHHHHHHHh---cCC-----CcEEEecCCCHHHHHHcCcccCC
Confidence 567899999999988776655552 68899999999987544321 223 456677764321 1 134699
Q ss_pred eeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 205 CIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 205 ~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
+|+.+.-- ......+..+.+.+.|...++.+.
T Consensus 87 ~Vi~~~~~----~~~~~~~~~~~~~~~~~~~iv~~~ 118 (155)
T 2g1u_A 87 MVFAFTND----DSTNFFISMNARYMFNVENVIARV 118 (155)
T ss_dssp EEEECSSC----HHHHHHHHHHHHHTSCCSEEEEEC
T ss_pred EEEEEeCC----cHHHHHHHHHHHHHCCCCeEEEEE
Confidence 99876421 233344555666667777777775
No 356
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=97.28 E-value=0.00019 Score=66.42 Aligned_cols=99 Identities=8% Similarity=-0.065 Sum_probs=68.9
Q ss_pred hcCCCCCCEEEEec-cCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEcc--ccc-hhhcC
Q 042119 125 ENGVVQPKKVAFVG-SGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRD--IME-VKEQL 200 (286)
Q Consensus 125 ~~~~~~~~~VL~IG-~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D--~~~-~~~~l 200 (286)
...+.++++||..| +|++|..++.+|+. .|++|+++|.+++..+.+++ +|. ...+-..+ ..+ +....
T Consensus 157 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~--~Ga~Vi~~~~~~~~~~~~~~----~g~---~~~~~~~~~~~~~~~~~~~ 227 (354)
T 2j8z_A 157 VGNVQAGDYVLIHAGLSGVGTAAIQLTRM--AGAIPLVTAGSQKKLQMAEK----LGA---AAGFNYKKEDFSEATLKFT 227 (354)
T ss_dssp TSCCCTTCEEEESSTTSHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHH----HTC---SEEEETTTSCHHHHHHHHT
T ss_pred hcCCCCCCEEEEECCccHHHHHHHHHHHH--cCCEEEEEeCCHHHHHHHHH----cCC---cEEEecCChHHHHHHHHHh
Confidence 44568899999999 79899999999984 78999999999998888754 452 22221111 111 11111
Q ss_pred --CCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 201 --GEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 201 --~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
.++|+||.++.. ..++...+.|++||++++-.
T Consensus 228 ~~~~~d~vi~~~G~--------~~~~~~~~~l~~~G~iv~~G 261 (354)
T 2j8z_A 228 KGAGVNLILDCIGG--------SYWEKNVNCLALDGRWVLYG 261 (354)
T ss_dssp TTSCEEEEEESSCG--------GGHHHHHHHEEEEEEEEECC
T ss_pred cCCCceEEEECCCc--------hHHHHHHHhccCCCEEEEEe
Confidence 369999966532 14667788999999998864
No 357
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=97.27 E-value=5.8e-05 Score=69.54 Aligned_cols=103 Identities=18% Similarity=0.191 Sum_probs=70.9
Q ss_pred HHH-hcCCCCCCEEEEeccCCChhhHHHHHhhcCCCc-EEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhc
Q 042119 122 ILS-ENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTST-HFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQ 199 (286)
Q Consensus 122 ~l~-~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~-~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~ 199 (286)
++. +..+ ++++||.+|+|++|+.++.+|+. .|+ +|+++|.+++..+.++++ . .. -+.....|..+....
T Consensus 156 ~l~~~~~~-~g~~VlV~GaG~vG~~~~q~a~~--~Ga~~Vi~~~~~~~~~~~~~~l-a-~~----v~~~~~~~~~~~~~~ 226 (343)
T 2dq4_A 156 TVYAGSGV-SGKSVLITGAGPIGLMAAMVVRA--SGAGPILVSDPNPYRLAFARPY-A-DR----LVNPLEEDLLEVVRR 226 (343)
T ss_dssp HHHSTTCC-TTSCEEEECCSHHHHHHHHHHHH--TTCCSEEEECSCHHHHGGGTTT-C-SE----EECTTTSCHHHHHHH
T ss_pred HHHHhCCC-CCCEEEEECCCHHHHHHHHHHHH--cCCCEEEEECCCHHHHHHHHHh-H-Hh----ccCcCccCHHHHHHH
Confidence 344 5567 89999999999999999999994 688 999999999998888764 2 11 011101121111111
Q ss_pred --CCCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 200 --LGEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 200 --l~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
-.++|+||.+.-. ...++...+.|++||+++.-.
T Consensus 227 ~~~~g~D~vid~~g~-------~~~~~~~~~~l~~~G~iv~~g 262 (343)
T 2dq4_A 227 VTGSGVEVLLEFSGN-------EAAIHQGLMALIPGGEARILG 262 (343)
T ss_dssp HHSSCEEEEEECSCC-------HHHHHHHHHHEEEEEEEEECC
T ss_pred hcCCCCCEEEECCCC-------HHHHHHHHHHHhcCCEEEEEe
Confidence 1369999966421 135778889999999998865
No 358
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.27 E-value=0.00074 Score=61.27 Aligned_cols=48 Identities=15% Similarity=0.007 Sum_probs=42.9
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcC
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDA 180 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g 180 (286)
.++..|||++||. |.|++..++ .|.+++|+|+++++++.|++.++...
T Consensus 234 ~~~~~vlD~f~Gs-Gt~~~~a~~---~g~~~~g~e~~~~~~~~a~~r~~~~~ 281 (297)
T 2zig_A 234 FVGDVVLDPFAGT-GTTLIAAAR---WGRRALGVELVPRYAQLAKERFAREV 281 (297)
T ss_dssp CTTCEEEETTCTT-THHHHHHHH---TTCEEEEEESCHHHHHHHHHHHHHHS
T ss_pred CCCCEEEECCCCC-CHHHHHHHH---cCCeEEEEeCCHHHHHHHHHHHHHhc
Confidence 5789999999995 888888777 78999999999999999999998764
No 359
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=97.27 E-value=0.00022 Score=65.29 Aligned_cols=99 Identities=17% Similarity=0.132 Sum_probs=69.2
Q ss_pred hcCCCCCCEEEEec-cCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEc--cccc-hhh--
Q 042119 125 ENGVVQPKKVAFVG-SGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTR--DIME-VKE-- 198 (286)
Q Consensus 125 ~~~~~~~~~VL~IG-~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~--D~~~-~~~-- 198 (286)
...+.++++||..| +|++|..++.+++. .|++|+++|.+++..+.+++ +|. ...+... |..+ +..
T Consensus 140 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~--~G~~Vi~~~~~~~~~~~~~~----~g~---~~~~d~~~~~~~~~i~~~~ 210 (333)
T 1wly_A 140 THKVKPGDYVLIHAAAGGMGHIMVPWARH--LGATVIGTVSTEEKAETARK----LGC---HHTINYSTQDFAEVVREIT 210 (333)
T ss_dssp TSCCCTTCEEEETTTTSTTHHHHHHHHHH--TTCEEEEEESSHHHHHHHHH----HTC---SEEEETTTSCHHHHHHHHH
T ss_pred hhCCCCCCEEEEECCccHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHH----cCC---CEEEECCCHHHHHHHHHHh
Confidence 34568899999999 49999999999984 68999999999988888765 452 2222111 1111 111
Q ss_pred cCCCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 199 QLGEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 199 ~l~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
.-.++|+||.++ |. ..++...+.|++||+++.-.
T Consensus 211 ~~~~~d~vi~~~--g~------~~~~~~~~~l~~~G~iv~~g 244 (333)
T 1wly_A 211 GGKGVDVVYDSI--GK------DTLQKSLDCLRPRGMCAAYG 244 (333)
T ss_dssp TTCCEEEEEECS--CT------TTHHHHHHTEEEEEEEEECC
T ss_pred CCCCCeEEEECC--cH------HHHHHHHHhhccCCEEEEEe
Confidence 113699999654 31 35678889999999998765
No 360
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=97.25 E-value=0.0017 Score=60.13 Aligned_cols=102 Identities=16% Similarity=0.150 Sum_probs=72.3
Q ss_pred CCCEEEEeccCCChhhH-HHHHhhcCCCcEEEEEeCChHHHHHHHHHHHh-------cCCCC---------CCeEEEEcc
Q 042119 130 QPKKVAFVGSGPMPLTS-IIMAKHHLTSTHFDNFDIDEAANDVARSIVAS-------DAEFE---------GRMKFLTRD 192 (286)
Q Consensus 130 ~~~~VL~IG~G~lp~ta-i~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~-------~g~l~---------~~i~f~~~D 192 (286)
...+|..||+|.+|-.- ..+|. .|..|+.+|+++++++.+++.+++ .|.+. .++++. .|
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a~---~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~-~~ 80 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFAS---GGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSC-TN 80 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHH---TTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEE-CC
T ss_pred CCCeEEEECCcHHHHHHHHHHHh---CCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccc-cc
Confidence 34799999999988653 33343 799999999999999988776643 12111 134432 22
Q ss_pred ccchhhcCCCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 193 IMEVKEQLGEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 193 ~~~~~~~l~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
+...+.+.|+|+.+. ..+.+-|.+++.++-++++|+.+|...+
T Consensus 81 ---l~~a~~~ad~ViEav--~E~l~iK~~lf~~l~~~~~~~aIlaSNT 123 (319)
T 3ado_A 81 ---LAEAVEGVVHIQECV--PENLDLKRKIFAQLDSIVDDRVVLSSSS 123 (319)
T ss_dssp ---HHHHTTTEEEEEECC--CSCHHHHHHHHHHHHTTCCSSSEEEECC
T ss_pred ---hHhHhccCcEEeecc--ccHHHHHHHHHHHHHHHhhhcceeehhh
Confidence 233466789998663 3456889999999999999999887764
No 361
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=97.23 E-value=0.00026 Score=65.58 Aligned_cols=99 Identities=16% Similarity=0.180 Sum_probs=68.8
Q ss_pred hcCCCCCCEEEEecc-CCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEcc--ccc-hhh--
Q 042119 125 ENGVVQPKKVAFVGS-GPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRD--IME-VKE-- 198 (286)
Q Consensus 125 ~~~~~~~~~VL~IG~-G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D--~~~-~~~-- 198 (286)
...++++++||..|+ |++|..++.+|+. .|++|+++|.+++..+.+++ +|. ...+-..+ ..+ +..
T Consensus 165 ~~~~~~g~~vlV~GasggiG~~~~~~a~~--~Ga~Vi~~~~~~~~~~~~~~----~ga---~~~~d~~~~~~~~~~~~~~ 235 (351)
T 1yb5_A 165 SACVKAGESVLVHGASGGVGLAACQIARA--YGLKILGTAGTEEGQKIVLQ----NGA---HEVFNHREVNYIDKIKKYV 235 (351)
T ss_dssp TSCCCTTCEEEEETCSSHHHHHHHHHHHH--TTCEEEEEESSHHHHHHHHH----TTC---SEEEETTSTTHHHHHHHHH
T ss_pred hhCCCCcCEEEEECCCChHHHHHHHHHHH--CCCEEEEEeCChhHHHHHHH----cCC---CEEEeCCCchHHHHHHHHc
Confidence 345688999999997 8899999999984 78999999999998886654 562 22121111 111 111
Q ss_pred cCCCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 199 QLGEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 199 ~l~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
.-.++|+||.++. . ..++...+.++|||+++.-.
T Consensus 236 ~~~~~D~vi~~~G------~--~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 236 GEKGIDIIIEMLA------N--VNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp CTTCEEEEEESCH------H--HHHHHHHHHEEEEEEEEECC
T ss_pred CCCCcEEEEECCC------h--HHHHHHHHhccCCCEEEEEe
Confidence 1126999986643 1 24677889999999998764
No 362
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=97.19 E-value=0.00021 Score=65.13 Aligned_cols=99 Identities=11% Similarity=0.070 Sum_probs=69.3
Q ss_pred hcCCCCCCEEEEec-cCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEcc--ccc-hhhc-
Q 042119 125 ENGVVQPKKVAFVG-SGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRD--IME-VKEQ- 199 (286)
Q Consensus 125 ~~~~~~~~~VL~IG-~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D--~~~-~~~~- 199 (286)
...+.++++||..| +|++|..++.+++. .|++|+++|.+++..+.+++ +|. ...+-..| ..+ +...
T Consensus 135 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~--~G~~V~~~~~~~~~~~~~~~----~g~---~~~~~~~~~~~~~~~~~~~ 205 (327)
T 1qor_A 135 TYEIKPDEQFLFHAAAGGVGLIACQWAKA--LGAKLIGTVGTAQKAQSALK----AGA---WQVINYREEDLVERLKEIT 205 (327)
T ss_dssp TSCCCTTCEEEESSTTBHHHHHHHHHHHH--HTCEEEEEESSHHHHHHHHH----HTC---SEEEETTTSCHHHHHHHHT
T ss_pred hhCCCCCCEEEEECCCCHHHHHHHHHHHH--cCCEEEEEeCCHHHHHHHHH----cCC---CEEEECCCccHHHHHHHHh
Confidence 34568899999999 78899999999984 68999999999998888766 452 22221111 111 1111
Q ss_pred -CCCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 200 -LGEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 200 -l~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
-.++|+|+.++- ...++...+.|++||+++.-.
T Consensus 206 ~~~~~D~vi~~~g--------~~~~~~~~~~l~~~G~iv~~g 239 (327)
T 1qor_A 206 GGKKVRVVYDSVG--------RDTWERSLDCLQRRGLMVSFG 239 (327)
T ss_dssp TTCCEEEEEECSC--------GGGHHHHHHTEEEEEEEEECC
T ss_pred CCCCceEEEECCc--------hHHHHHHHHHhcCCCEEEEEe
Confidence 126999986642 135678889999999998765
No 363
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=97.18 E-value=0.0041 Score=48.56 Aligned_cols=95 Identities=15% Similarity=0.066 Sum_probs=60.0
Q ss_pred CCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchh----hcCCCccee
Q 042119 131 PKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVK----EQLGEYDCI 206 (286)
Q Consensus 131 ~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~----~~l~~fD~V 206 (286)
+++|+.+|+|.+|........ ..|.+|+.+|.+++..+..++ ..| +.++.+|..+.. ....++|+|
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~--~~g~~v~~~d~~~~~~~~~~~---~~~-----~~~~~~d~~~~~~l~~~~~~~~d~v 73 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLS--EKGHDIVLIDIDKDICKKASA---EID-----ALVINGDCTKIKTLEDAGIEDADMY 73 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHH--HTTCEEEEEESCHHHHHHHHH---HCS-----SEEEESCTTSHHHHHHTTTTTCSEE
T ss_pred CCEEEEECCCHHHHHHHHHHH--hCCCeEEEEECCHHHHHHHHH---hcC-----cEEEEcCCCCHHHHHHcCcccCCEE
Confidence 479999999988766443333 268899999999987654432 234 456778765421 124579999
Q ss_pred ehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 207 FLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 207 ~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
+.+.-. ......+..+.+.++++ .++++.
T Consensus 74 i~~~~~----~~~~~~~~~~~~~~~~~-~ii~~~ 102 (140)
T 1lss_A 74 IAVTGK----EEVNLMSSLLAKSYGIN-KTIARI 102 (140)
T ss_dssp EECCSC----HHHHHHHHHHHHHTTCC-CEEEEC
T ss_pred EEeeCC----chHHHHHHHHHHHcCCC-EEEEEe
Confidence 876321 22334555667778886 455543
No 364
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=97.18 E-value=0.0024 Score=61.72 Aligned_cols=98 Identities=18% Similarity=0.264 Sum_probs=68.2
Q ss_pred CCEEEEeccCCChhhHH-HHHhhcCCCcEEEEEeCChHHHHHHHHHHHh-------cCCC------CCCeEEEEccccch
Q 042119 131 PKKVAFVGSGPMPLTSI-IMAKHHLTSTHFDNFDIDEAANDVARSIVAS-------DAEF------EGRMKFLTRDIMEV 196 (286)
Q Consensus 131 ~~~VL~IG~G~lp~tai-~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~-------~g~l------~~~i~f~~~D~~~~ 196 (286)
-++|.+||+|.+|.... .+++ .|.+|+.+|++++.++.+++.+.. .|.+ ....++ +.|.
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~---~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~--- 109 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFAR---VGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSST--- 109 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT---TTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCG---
T ss_pred CCEEEEECcCHHHHHHHHHHHh---CCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCH---
Confidence 46899999999886533 3343 688999999999999988764321 1100 011233 4453
Q ss_pred hhcCCCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEE
Q 042119 197 KEQLGEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLV 238 (286)
Q Consensus 197 ~~~l~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~ 238 (286)
..+.+.|+|+.+.. .+.+-|..++.++.+.++||.+|+.
T Consensus 110 -~~~~~aDlVIeaVp--e~~~~k~~v~~~l~~~~~~~~ii~s 148 (463)
T 1zcj_A 110 -KELSTVDLVVEAVF--EDMNLKKKVFAELSALCKPGAFLCT 148 (463)
T ss_dssp -GGGTTCSEEEECCC--SCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred -HHHCCCCEEEEcCC--CCHHHHHHHHHHHHhhCCCCeEEEe
Confidence 23467999998753 2445688999999999999988876
No 365
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=97.18 E-value=0.0011 Score=64.48 Aligned_cols=99 Identities=21% Similarity=0.225 Sum_probs=70.1
Q ss_pred CCEEEEeccCCChhh-HHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHh-------cCCCC--------CCeEEEEcccc
Q 042119 131 PKKVAFVGSGPMPLT-SIIMAKHHLTSTHFDNFDIDEAANDVARSIVAS-------DAEFE--------GRMKFLTRDIM 194 (286)
Q Consensus 131 ~~~VL~IG~G~lp~t-ai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~-------~g~l~--------~~i~f~~~D~~ 194 (286)
-++|.+||+|.+|.+ +..+++ .|.+|+.+|+++++++.+++.+++ .|.+. .++++. .|.
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~---aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~-~~~- 79 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAAS---HGHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPV-TDI- 79 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHH---TTCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEE-CCG-
T ss_pred CCEEEEECcCHHHHHHHHHHHH---CCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEe-CCH-
Confidence 358999999998876 445555 688999999999999998875432 12100 134442 332
Q ss_pred chhhcCCCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEe
Q 042119 195 EVKEQLGEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVR 239 (286)
Q Consensus 195 ~~~~~l~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r 239 (286)
..+.+.|+|+.+.. -+.+-|..++.++.+.++||.+|+..
T Consensus 80 ---~~~~~aDlVIeAVp--e~~~vk~~v~~~l~~~~~~~~Ilasn 119 (483)
T 3mog_A 80 ---HALAAADLVIEAAS--ERLEVKKALFAQLAEVCPPQTLLTTN 119 (483)
T ss_dssp ---GGGGGCSEEEECCC--CCHHHHHHHHHHHHHHSCTTCEEEEC
T ss_pred ---HHhcCCCEEEEcCC--CcHHHHHHHHHHHHHhhccCcEEEec
Confidence 23457899998743 24457889999999999999988653
No 366
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=97.18 E-value=0.0031 Score=61.15 Aligned_cols=100 Identities=17% Similarity=0.184 Sum_probs=67.4
Q ss_pred CCCEEEEeccCCChhh-HHHHHhhcCCCcEEEEEeCChHHH-HHHHHHHH---hcCCC--------CCCeEEEEccccch
Q 042119 130 QPKKVAFVGSGPMPLT-SIIMAKHHLTSTHFDNFDIDEAAN-DVARSIVA---SDAEF--------EGRMKFLTRDIMEV 196 (286)
Q Consensus 130 ~~~~VL~IG~G~lp~t-ai~lA~~~~~g~~V~~iDid~~ai-~~Ar~~~~---~~g~l--------~~~i~f~~~D~~~~ 196 (286)
+-++|.+||+|.+|.+ +..+++ .|.+|+.+|++++.. +..++.++ +.|.+ -.++++. .|.
T Consensus 53 ~i~kVaVIGaG~MG~~IA~~la~---aG~~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t-~dl--- 125 (460)
T 3k6j_A 53 DVNSVAIIGGGTMGKAMAICFGL---AGIETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKIT-SDF--- 125 (460)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH---TTCEEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEE-SCG---
T ss_pred cCCEEEEECCCHHHHHHHHHHHH---CCCeEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEe-CCH---
Confidence 3479999999998876 444555 689999999999821 11122221 22311 1355553 332
Q ss_pred hhcCCCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEe
Q 042119 197 KEQLGEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVR 239 (286)
Q Consensus 197 ~~~l~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r 239 (286)
..+.+.|+|+.+.. -+.+-|..++.++.+.++||.+|+..
T Consensus 126 -~al~~aDlVIeAVp--e~~~vk~~v~~~l~~~~~~~aIlasn 165 (460)
T 3k6j_A 126 -HKLSNCDLIVESVI--EDMKLKKELFANLENICKSTCIFGTN 165 (460)
T ss_dssp -GGCTTCSEEEECCC--SCHHHHHHHHHHHHTTSCTTCEEEEC
T ss_pred -HHHccCCEEEEcCC--CCHHHHHHHHHHHHhhCCCCCEEEec
Confidence 24678999998753 24467889999999999999988754
No 367
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=97.16 E-value=0.0002 Score=67.62 Aligned_cols=99 Identities=22% Similarity=0.257 Sum_probs=66.4
Q ss_pred CCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEE---Ec---------------
Q 042119 130 QPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFL---TR--------------- 191 (286)
Q Consensus 130 ~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~---~~--------------- 191 (286)
++++|+.+|+|+.|..++.+++. .|++|+.+|++++..+.+++ +|. ++. ..
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~--~Ga~V~~~d~~~~~~~~~~~----~Ga-----~~~~i~~~~~~~~~~~~~~~~~~ 239 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKR--LGAVVMATDVRAATKEQVES----LGG-----KFITVDDEAMKTAETAGGYAKEM 239 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSCSTTHHHHHH----TTC-----EECCC------------------
T ss_pred CCCEEEEECCCHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHH----cCC-----eEEeecccccccccccccchhhc
Confidence 68999999999999999999984 68999999999988776654 441 111 10
Q ss_pred -------cccchhhcCCCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 192 -------DIMEVKEQLGEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 192 -------D~~~~~~~l~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
+...+...+.++|+|+.+.++.....++ -+.++..+.|+||++++.-.
T Consensus 240 s~~~~~~~~~~l~~~~~~aDvVi~~~~~pg~~~~~-li~~~~l~~mk~g~vivdva 294 (384)
T 1l7d_A 240 GEEFRKKQAEAVLKELVKTDIAITTALIPGKPAPV-LITEEMVTKMKPGSVIIDLA 294 (384)
T ss_dssp -----CCHHHHHHHHHTTCSEEEECCCCTTSCCCC-CSCHHHHTTSCTTCEEEETT
T ss_pred CHHHHhhhHHHHHHHhCCCCEEEECCccCCCCCCe-eeCHHHHhcCCCCCEEEEEe
Confidence 0011222335799999776552111111 12356778899999988765
No 368
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=97.15 E-value=0.0044 Score=56.81 Aligned_cols=105 Identities=12% Similarity=0.083 Sum_probs=69.7
Q ss_pred CCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHH-HHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeeh
Q 042119 130 QPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAAND-VARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFL 208 (286)
Q Consensus 130 ~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~-~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~ 208 (286)
...+|..||+|.+|.+............+|+.+|++++..+ .+..+......+..++++..++ ..++.+.|+|++
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~~~----~~al~~aDvVii 80 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGD----YDDCRDADLVVI 80 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECC----GGGTTTCSEEEE
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEcCc----HHHhCCCCEEEE
Confidence 45799999999999876655542223458999999998555 3566666544222356666543 234678999998
Q ss_pred hhhccCC------------hhHHHHHHHHHHhhccCCcEEEEe
Q 042119 209 AALVGMS------------KEEKLTILGHIRKYMKDGGILLVR 239 (286)
Q Consensus 209 aalvg~~------------~~~k~~vl~~l~~~l~pgg~lv~r 239 (286)
++-++.. .+-+.++.+.+.++ .|++.+++-
T Consensus 81 a~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~~iv~ 122 (316)
T 1ldn_A 81 CAGANQKPGETRLDLVDKNIAIFRSIVESVMAS-GFQGLFLVA 122 (316)
T ss_dssp CCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHH-TCCSEEEEC
T ss_pred cCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHH-CCCCEEEEe
Confidence 8654221 13466677777777 588887774
No 369
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.15 E-value=0.00024 Score=64.66 Aligned_cols=111 Identities=11% Similarity=0.119 Sum_probs=66.6
Q ss_pred HhcCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCC-eEEEEc-cccchhhcCC
Q 042119 124 SENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGR-MKFLTR-DIMEVKEQLG 201 (286)
Q Consensus 124 ~~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~-i~f~~~-D~~~~~~~l~ 201 (286)
.++.+.++.+|||+||||+|.+-....+ .+-..|+|+|+....-..+... ...| .+ +.+.+. |+.++ ...
T Consensus 84 eK~~Lk~~~~VLDLGaAPGGWsQvAa~~--~gv~sV~GvdvG~d~~~~pi~~-~~~g---~~ii~~~~~~dv~~l--~~~ 155 (282)
T 3gcz_A 84 ERGYVKPTGIVVDLGCGRGGWSYYAASL--KNVKKVMAFTLGVQGHEKPIMR-TTLG---WNLIRFKDKTDVFNM--EVI 155 (282)
T ss_dssp HTTSCCCCEEEEEETCTTCHHHHHHHTS--TTEEEEEEECCCCTTSCCCCCC-CBTT---GGGEEEECSCCGGGS--CCC
T ss_pred HhcCCCCCCEEEEeCCCCCHHHHHHHHh--cCCCeeeeEEeccCcccccccc-ccCC---CceEEeeCCcchhhc--CCC
Confidence 3556788899999999999998655544 3455799999986532222110 1122 23 334333 44332 225
Q ss_pred Ccceeehhhh--ccCChhH---HHHHHHHHHhhccCC--cEEEEeecC
Q 042119 202 EYDCIFLAAL--VGMSKEE---KLTILGHIRKYMKDG--GILLVRSAK 242 (286)
Q Consensus 202 ~fD~V~~aal--vg~~~~~---k~~vl~~l~~~l~pg--g~lv~r~~~ 242 (286)
.+|+|+.+.. .|...-+ -..+|+-..+.|+|| |.+++.-..
T Consensus 156 ~~DvVLSDmApnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~ 203 (282)
T 3gcz_A 156 PGDTLLCDIGESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLC 203 (282)
T ss_dssp CCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESC
T ss_pred CcCEEEecCccCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEec
Confidence 7999986532 1221111 123566667899999 999997655
No 370
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=97.14 E-value=0.0015 Score=59.85 Aligned_cols=92 Identities=16% Similarity=0.133 Sum_probs=63.6
Q ss_pred CCEEEEeccCCChhhHH-HHHhhcCCCc--EEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceee
Q 042119 131 PKKVAFVGSGPMPLTSI-IMAKHHLTST--HFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIF 207 (286)
Q Consensus 131 ~~~VL~IG~G~lp~tai-~lA~~~~~g~--~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~ 207 (286)
.++|.+||+|.+|.+-. .+++ .|. +|+++|.+++.++.+++ .| ..+ . ...|..+. ...+.|+|+
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~---~G~~~~V~~~dr~~~~~~~a~~----~G-~~~--~-~~~~~~~~--~~~~aDvVi 99 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRR---SGFKGKIYGYDINPESISKAVD----LG-IID--E-GTTSIAKV--EDFSPDFVM 99 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHH---TTCCSEEEEECSCHHHHHHHHH----TT-SCS--E-EESCTTGG--GGGCCSEEE
T ss_pred CCEEEEEeeCHHHHHHHHHHHh---CCCCCEEEEEECCHHHHHHHHH----CC-Ccc--h-hcCCHHHH--hhccCCEEE
Confidence 37999999999887643 3333 566 99999999998877654 56 221 1 22343220 235789999
Q ss_pred hhhhccCChhHHHHHHHHHHhhccCCcEEEEe
Q 042119 208 LAALVGMSKEEKLTILGHIRKYMKDGGILLVR 239 (286)
Q Consensus 208 ~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r 239 (286)
++.-. ....++++++.+.++||.+|+--
T Consensus 100 lavp~----~~~~~vl~~l~~~l~~~~iv~d~ 127 (314)
T 3ggo_A 100 LSSPV----RTFREIAKKLSYILSEDATVTDQ 127 (314)
T ss_dssp ECSCG----GGHHHHHHHHHHHSCTTCEEEEC
T ss_pred EeCCH----HHHHHHHHHHhhccCCCcEEEEC
Confidence 87543 45677999999999999877643
No 371
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=97.14 E-value=0.00015 Score=69.06 Aligned_cols=99 Identities=27% Similarity=0.353 Sum_probs=66.3
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEcccc--------------
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIM-------------- 194 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~-------------- 194 (286)
-++++|+.+|+|+.|..++.+|+. .|++|+.+|++++..+.+++ +|. ++...|..
T Consensus 170 l~g~~V~ViGaG~iG~~aa~~a~~--~Ga~V~v~D~~~~~~~~~~~----lGa-----~~~~~~~~~~~~~~~g~~~~~~ 238 (401)
T 1x13_A 170 VPPAKVMVIGAGVAGLAAIGAANS--LGAIVRAFDTRPEVKEQVQS----MGA-----EFLELDFKEEAGSGDGYAKVMS 238 (401)
T ss_dssp ECCCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSCGGGHHHHHH----TTC-----EECCC--------CCHHHHHHS
T ss_pred cCCCEEEEECCCHHHHHHHHHHHH--CCCEEEEEcCCHHHHHHHHH----cCC-----EEEEecccccccccccchhhcc
Confidence 368999999999999999999984 68999999999988777643 452 22211110
Q ss_pred ---------chhhcCCCcceeehhhhc-cCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 195 ---------EVKEQLGEYDCIFLAALV-GMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 195 ---------~~~~~l~~fD~V~~aalv-g~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
.+...+.++|+|+.+.++ |.. .++ -+-++..+.|+||++|+.-.
T Consensus 239 ~~~~~~~~~~l~e~~~~aDvVI~~~~~pg~~-ap~-li~~~~l~~mk~g~vIVdva 292 (401)
T 1x13_A 239 DAFIKAEMELFAAQAKEVDIIVTTALIPGKP-APK-LITREMVDSMKAGSVIVDLA 292 (401)
T ss_dssp HHHHHHHHHHHHHHHHHCSEEEECCCCTTSC-CCC-CBCHHHHHTSCTTCEEEETT
T ss_pred HHHHHHHHHHHHHHhCCCCEEEECCccCCCC-CCe-eeCHHHHhcCCCCcEEEEEc
Confidence 122222468999987655 321 111 12246778899999988765
No 372
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=97.13 E-value=0.00047 Score=64.01 Aligned_cols=92 Identities=17% Similarity=0.246 Sum_probs=65.3
Q ss_pred CCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCCh---HHHHHHHHHHHhcCCCCCCeEEEEccccc-hh-hcCCCcce
Q 042119 131 PKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDE---AANDVARSIVASDAEFEGRMKFLTRDIME-VK-EQLGEYDC 205 (286)
Q Consensus 131 ~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~---~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~-~~-~~l~~fD~ 205 (286)
+++||.+|+|++|..++.+|+. .|++|+++|.++ +..+.+++ +|. +.+. .. |..+ +. .. .++|+
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~--~Ga~Vi~~~~~~~~~~~~~~~~~----~ga--~~v~-~~-~~~~~~~~~~-~~~d~ 249 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRT--YGLEVWMANRREPTEVEQTVIEE----TKT--NYYN-SS-NGYDKLKDSV-GKFDV 249 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHH--HTCEEEEEESSCCCHHHHHHHHH----HTC--EEEE-CT-TCSHHHHHHH-CCEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHh--CCCEEEEEeCCccchHHHHHHHH----hCC--ceec-hH-HHHHHHHHhC-CCCCE
Confidence 8999999999999999999984 688999999998 77776655 462 2221 11 1111 11 11 46999
Q ss_pred eehhhhccCChhHHHHHH-HHHHhhccCCcEEEEee
Q 042119 206 IFLAALVGMSKEEKLTIL-GHIRKYMKDGGILLVRS 240 (286)
Q Consensus 206 V~~aalvg~~~~~k~~vl-~~l~~~l~pgg~lv~r~ 240 (286)
||.++-. . ..+ +...+.|++||+++.-.
T Consensus 250 vid~~g~--~-----~~~~~~~~~~l~~~G~iv~~g 278 (366)
T 2cdc_A 250 IIDATGA--D-----VNILGNVIPLLGRNGVLGLFG 278 (366)
T ss_dssp EEECCCC--C-----THHHHHHGGGEEEEEEEEECS
T ss_pred EEECCCC--h-----HHHHHHHHHHHhcCCEEEEEe
Confidence 9966432 1 145 78889999999998865
No 373
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=97.13 E-value=0.0004 Score=64.11 Aligned_cols=101 Identities=9% Similarity=0.020 Sum_probs=69.9
Q ss_pred HhcCCCCC--CEEEEecc-CCChhhHHHHHhhcCCCc-EEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEcc--ccchh
Q 042119 124 SENGVVQP--KKVAFVGS-GPMPLTSIIMAKHHLTST-HFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRD--IMEVK 197 (286)
Q Consensus 124 ~~~~~~~~--~~VL~IG~-G~lp~tai~lA~~~~~g~-~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D--~~~~~ 197 (286)
....++++ ++||..|+ |++|..++.+|+. .|+ +|+++|.+++..+.+++. +|. ...+-..+ ..+..
T Consensus 152 ~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~--~Ga~~Vi~~~~~~~~~~~~~~~---~g~---~~~~d~~~~~~~~~~ 223 (357)
T 2zb4_A 152 EKGHITAGSNKTMVVSGAAGACGSVAGQIGHF--LGCSRVVGICGTHEKCILLTSE---LGF---DAAINYKKDNVAEQL 223 (357)
T ss_dssp HHSCCCTTSCCEEEESSTTBHHHHHHHHHHHH--TTCSEEEEEESCHHHHHHHHHT---SCC---SEEEETTTSCHHHHH
T ss_pred HhcCCCCCCccEEEEECCCcHHHHHHHHHHHH--CCCCeEEEEeCCHHHHHHHHHH---cCC---ceEEecCchHHHHHH
Confidence 34567888 99999998 9999999999984 788 999999999887766542 562 22221111 11111
Q ss_pred hc-C-CCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 198 EQ-L-GEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 198 ~~-l-~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
.. . +++|+|+.++. . ..++...+.|++||+++.-.
T Consensus 224 ~~~~~~~~d~vi~~~G------~--~~~~~~~~~l~~~G~iv~~G 260 (357)
T 2zb4_A 224 RESCPAGVDVYFDNVG------G--NISDTVISQMNENSHIILCG 260 (357)
T ss_dssp HHHCTTCEEEEEESCC------H--HHHHHHHHTEEEEEEEEECC
T ss_pred HHhcCCCCCEEEECCC------H--HHHHHHHHHhccCcEEEEEC
Confidence 11 1 26999986642 1 46788899999999998754
No 374
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=97.13 E-value=0.00016 Score=66.66 Aligned_cols=97 Identities=9% Similarity=-0.020 Sum_probs=64.3
Q ss_pred CCC-CEEEEe-ccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcC---CCc
Q 042119 129 VQP-KKVAFV-GSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQL---GEY 203 (286)
Q Consensus 129 ~~~-~~VL~I-G~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l---~~f 203 (286)
.++ ++|+.. |+|++|+.++.+|+. .|++|+++|.+++..+.+++ +|. ..-+.....|..+..... .++
T Consensus 162 ~~g~~~vli~gg~g~vG~~a~qla~~--~Ga~Vi~~~~~~~~~~~~~~----~Ga-~~~~~~~~~~~~~~v~~~~~~~g~ 234 (349)
T 3pi7_A 162 QEGEKAFVMTAGASQLCKLIIGLAKE--EGFRPIVTVRRDEQIALLKD----IGA-AHVLNEKAPDFEATLREVMKAEQP 234 (349)
T ss_dssp HHCCSEEEESSTTSHHHHHHHHHHHH--HTCEEEEEESCGGGHHHHHH----HTC-SEEEETTSTTHHHHHHHHHHHHCC
T ss_pred hCCCCEEEEeCCCcHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHH----cCC-CEEEECCcHHHHHHHHHHhcCCCC
Confidence 445 566655 999999999999994 68999999999999888875 462 111111111221111111 269
Q ss_pred ceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 204 DCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 204 D~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
|+||.++.. ..++...+.|++||+++.-.
T Consensus 235 D~vid~~g~--------~~~~~~~~~l~~~G~iv~~G 263 (349)
T 3pi7_A 235 RIFLDAVTG--------PLASAIFNAMPKRARWIIYG 263 (349)
T ss_dssp CEEEESSCH--------HHHHHHHHHSCTTCEEEECC
T ss_pred cEEEECCCC--------hhHHHHHhhhcCCCEEEEEe
Confidence 999966431 13467788999999999865
No 375
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=97.13 E-value=0.00022 Score=66.13 Aligned_cols=105 Identities=14% Similarity=0.087 Sum_probs=68.4
Q ss_pred HHHHh--cCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEcc-ccchh
Q 042119 121 TILSE--NGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRD-IMEVK 197 (286)
Q Consensus 121 ~~l~~--~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D-~~~~~ 197 (286)
.++.+ ..++++++||.+|+|++|+.++.+|+. ..|++|+++|.+++..+++++ +|. +. .+-..+ ..+..
T Consensus 175 ~al~~~~~~~~~g~~VlV~GaG~vG~~avqlak~-~~Ga~Vi~~~~~~~~~~~~~~----lGa--~~-vi~~~~~~~~~v 246 (359)
T 1h2b_A 175 RAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKV-MTPATVIALDVKEEKLKLAER----LGA--DH-VVDARRDPVKQV 246 (359)
T ss_dssp HHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHH-HCCCEEEEEESSHHHHHHHHH----TTC--SE-EEETTSCHHHHH
T ss_pred HHHHhhccCCCCCCEEEEECCCHHHHHHHHHHHH-cCCCeEEEEeCCHHHHHHHHH----hCC--CE-EEeccchHHHHH
Confidence 34445 567899999999999999999999994 338999999999998888764 562 21 121111 11111
Q ss_pred hcC--C-CcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 198 EQL--G-EYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 198 ~~l--~-~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
..+ + ++|+||.+.-. +....++...+. +||+++.-.
T Consensus 247 ~~~~~g~g~Dvvid~~G~-----~~~~~~~~~~~~--~~G~~v~~g 285 (359)
T 1h2b_A 247 MELTRGRGVNVAMDFVGS-----QATVDYTPYLLG--RMGRLIIVG 285 (359)
T ss_dssp HHHTTTCCEEEEEESSCC-----HHHHHHGGGGEE--EEEEEEECC
T ss_pred HHHhCCCCCcEEEECCCC-----chHHHHHHHhhc--CCCEEEEEe
Confidence 111 2 69999965421 111145555555 899988764
No 376
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=97.13 E-value=0.00018 Score=65.64 Aligned_cols=99 Identities=16% Similarity=0.200 Sum_probs=68.4
Q ss_pred hcCCCCCC-EEEEecc-CCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccc-cchhhcC-
Q 042119 125 ENGVVQPK-KVAFVGS-GPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDI-MEVKEQL- 200 (286)
Q Consensus 125 ~~~~~~~~-~VL~IG~-G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~-~~~~~~l- 200 (286)
+..+.+++ +||.+|+ |++|..++.+|+. .|++|+++|.+++..+.+++ +|. +.+ +-..|. .+....+
T Consensus 144 ~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~--~Ga~vi~~~~~~~~~~~~~~----lGa--~~v-~~~~~~~~~~~~~~~ 214 (330)
T 1tt7_A 144 QNGLSPEKGSVLVTGATGGVGGIAVSMLNK--RGYDVVASTGNREAADYLKQ----LGA--SEV-ISREDVYDGTLKALS 214 (330)
T ss_dssp HTTCCGGGCCEEEESTTSHHHHHHHHHHHH--HTCCEEEEESSSSTHHHHHH----HTC--SEE-EEHHHHCSSCCCSSC
T ss_pred hcCcCCCCceEEEECCCCHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHH----cCC--cEE-EECCCchHHHHHHhh
Confidence 34566675 8999997 9999999999994 68999999999988887765 462 211 211111 0111111
Q ss_pred -CCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 201 -GEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 201 -~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
..+|+||.+. | . ..++...+.+++||++++-.
T Consensus 215 ~~~~d~vid~~--g----~--~~~~~~~~~l~~~G~iv~~G 247 (330)
T 1tt7_A 215 KQQWQGAVDPV--G----G--KQLASLLSKIQYGGSVAVSG 247 (330)
T ss_dssp CCCEEEEEESC--C----T--HHHHHHHTTEEEEEEEEECC
T ss_pred cCCccEEEECC--c----H--HHHHHHHHhhcCCCEEEEEe
Confidence 3699998654 3 1 25778889999999998764
No 377
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=97.11 E-value=0.0028 Score=50.25 Aligned_cols=95 Identities=8% Similarity=0.066 Sum_probs=63.4
Q ss_pred CCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhh----cCCCccee
Q 042119 131 PKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKE----QLGEYDCI 206 (286)
Q Consensus 131 ~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~----~l~~fD~V 206 (286)
.++|+.+|+|.+|........ ..|.+|+++|.+++.++.+++ .| +.++.+|+.+... ...++|+|
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~--~~g~~V~~id~~~~~~~~~~~----~~-----~~~~~gd~~~~~~l~~~~~~~~d~v 74 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELT--AAGKKVLAVDKSKEKIELLED----EG-----FDAVIADPTDESFYRSLDLEGVSAV 74 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHH--HTTCCEEEEESCHHHHHHHHH----TT-----CEEEECCTTCHHHHHHSCCTTCSEE
T ss_pred CCEEEEECCCHHHHHHHHHHH--HCCCeEEEEECCHHHHHHHHH----CC-----CcEEECCCCCHHHHHhCCcccCCEE
Confidence 468999999988775544433 268999999999998776654 34 5788899876321 23578998
Q ss_pred ehhhhccCChhHHHHHHHHHHhhccCCcEEEEeec
Q 042119 207 FLAALVGMSKEEKLTILGHIRKYMKDGGILLVRSA 241 (286)
Q Consensus 207 ~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~~ 241 (286)
+.+.- +.+.. ..+....+.+. ...++.|..
T Consensus 75 i~~~~---~~~~n-~~~~~~a~~~~-~~~iia~~~ 104 (141)
T 3llv_A 75 LITGS---DDEFN-LKILKALRSVS-DVYAIVRVS 104 (141)
T ss_dssp EECCS---CHHHH-HHHHHHHHHHC-CCCEEEEES
T ss_pred EEecC---CHHHH-HHHHHHHHHhC-CceEEEEEc
Confidence 86532 22333 34445556666 677777753
No 378
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=97.09 E-value=0.0031 Score=50.97 Aligned_cols=98 Identities=6% Similarity=0.014 Sum_probs=65.1
Q ss_pred CCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCCh-HHHHHHHHHHHhcCCCCCCeEEEEccccchh----hcCCCcce
Q 042119 131 PKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDE-AANDVARSIVASDAEFEGRMKFLTRDIMEVK----EQLGEYDC 205 (286)
Q Consensus 131 ~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~-~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~----~~l~~fD~ 205 (286)
..+|+.+|+|.+|........ ..|.+|+.+|.++ +..+..++. .. ..+.++.||+.+.. ..+.++|+
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~--~~g~~V~vid~~~~~~~~~~~~~---~~---~~~~~i~gd~~~~~~l~~a~i~~ad~ 74 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLN--QRGQNVTVISNLPEDDIKQLEQR---LG---DNADVIPGDSNDSSVLKKAGIDRCRA 74 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHH--HTTCCEEEEECCCHHHHHHHHHH---HC---TTCEEEESCTTSHHHHHHHTTTTCSE
T ss_pred CCcEEEECCCHHHHHHHHHHH--HCCCCEEEEECCChHHHHHHHHh---hc---CCCeEEEcCCCCHHHHHHcChhhCCE
Confidence 468999999987765444333 2689999999984 544333332 22 34789999987532 13568999
Q ss_pred eehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 206 IFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 206 V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
|+.+.- + ......+....+.+.|...+++|-
T Consensus 75 vi~~~~---~-d~~n~~~~~~a~~~~~~~~ii~~~ 105 (153)
T 1id1_A 75 ILALSD---N-DADNAFVVLSAKDMSSDVKTVLAV 105 (153)
T ss_dssp EEECSS---C-HHHHHHHHHHHHHHTSSSCEEEEC
T ss_pred EEEecC---C-hHHHHHHHHHHHHHCCCCEEEEEE
Confidence 886532 1 234456667778888888888875
No 379
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=97.07 E-value=0.00091 Score=61.85 Aligned_cols=101 Identities=9% Similarity=0.049 Sum_probs=61.2
Q ss_pred cCCCCCCEEEEecc-CCChhhHHHHHhhcCCCcEEEEE-eCChHHHHHHHHHHHhcCCCCCCeEEEEc-----cccchhh
Q 042119 126 NGVVQPKKVAFVGS-GPMPLTSIIMAKHHLTSTHFDNF-DIDEAANDVARSIVASDAEFEGRMKFLTR-----DIMEVKE 198 (286)
Q Consensus 126 ~~~~~~~~VL~IG~-G~lp~tai~lA~~~~~g~~V~~i-Did~~ai~~Ar~~~~~~g~l~~~i~f~~~-----D~~~~~~ 198 (286)
..+.++++||.+|+ |++|+.++.+|+. .|++++++ +.++.. +.-++.++++|. +.+ +-.. ++.+...
T Consensus 163 ~~~~~g~~VlV~Ga~G~vG~~aiqlak~--~Ga~vi~~~~~~~~~-~~~~~~~~~lGa--~~v-i~~~~~~~~~~~~~~~ 236 (357)
T 1zsy_A 163 EQLQPGDSVIQNASNSGVGQAVIQIAAA--LGLRTINVVRDRPDI-QKLSDRLKSLGA--EHV-ITEEELRRPEMKNFFK 236 (357)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHH--HTCEEEEEECCCSCH-HHHHHHHHHTTC--SEE-EEHHHHHSGGGGGTTS
T ss_pred hccCCCCEEEEeCCcCHHHHHHHHHHHH--cCCEEEEEecCccch-HHHHHHHHhcCC--cEE-EecCcchHHHHHHHHh
Confidence 35688999999997 9999999999994 68876655 444322 111233455772 221 2111 1111111
Q ss_pred cCCCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 199 QLGEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 199 ~l~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
...++|+||.+. | .+. .....+.++|||+++.-.
T Consensus 237 ~~~~~Dvvid~~--g---~~~---~~~~~~~l~~~G~iv~~G 270 (357)
T 1zsy_A 237 DMPQPRLALNCV--G---GKS---STELLRQLARGGTMVTYG 270 (357)
T ss_dssp SSCCCSEEEESS--C---HHH---HHHHHTTSCTTCEEEECC
T ss_pred CCCCceEEEECC--C---cHH---HHHHHHhhCCCCEEEEEe
Confidence 112599999654 2 121 235678999999998764
No 380
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=97.05 E-value=0.00044 Score=67.69 Aligned_cols=90 Identities=24% Similarity=0.211 Sum_probs=64.9
Q ss_pred CCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceee
Q 042119 128 VVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIF 207 (286)
Q Consensus 128 ~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~ 207 (286)
..++++|+.||+|++|......++. .|++|+++|+++...+.|++ .| . ++ .+..+ .+.++|+|+
T Consensus 271 ~l~GktV~IiG~G~IG~~~A~~lka--~Ga~Viv~d~~~~~~~~A~~----~G-a----~~--~~l~e---~l~~aDvVi 334 (494)
T 3ce6_A 271 LIGGKKVLICGYGDVGKGCAEAMKG--QGARVSVTEIDPINALQAMM----EG-F----DV--VTVEE---AIGDADIVV 334 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSCHHHHHHHHH----TT-C----EE--CCHHH---HGGGCSEEE
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHH----cC-C----EE--ecHHH---HHhCCCEEE
Confidence 5789999999999999999888884 68999999999988776654 56 2 22 23322 235789999
Q ss_pred hhhhccCChhHHHHHHH-HHHhhccCCcEEEEee
Q 042119 208 LAALVGMSKEEKLTILG-HIRKYMKDGGILLVRS 240 (286)
Q Consensus 208 ~aalvg~~~~~k~~vl~-~l~~~l~pgg~lv~r~ 240 (286)
.+.-. + .++. ...+.|||||+++.-.
T Consensus 335 ~atgt------~-~~i~~~~l~~mk~ggilvnvG 361 (494)
T 3ce6_A 335 TATGN------K-DIIMLEHIKAMKDHAILGNIG 361 (494)
T ss_dssp ECSSS------S-CSBCHHHHHHSCTTCEEEECS
T ss_pred ECCCC------H-HHHHHHHHHhcCCCcEEEEeC
Confidence 76421 1 1222 5667799999987754
No 381
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=97.03 E-value=0.0051 Score=56.50 Aligned_cols=107 Identities=14% Similarity=0.148 Sum_probs=76.9
Q ss_pred CCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCC-CCCCeEEEEccccc-hhhcC--CCcc-
Q 042119 130 QPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAE-FEGRMKFLTRDIME-VKEQL--GEYD- 204 (286)
Q Consensus 130 ~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~-l~~~i~f~~~D~~~-~~~~l--~~fD- 204 (286)
..+.|+.+||| ++..+..+.. ..+.+|.-|| .|+.+++.++++...|. -..+..++.+|+.+ +...+ ..||
T Consensus 102 g~~QvV~LGaG-lDTra~Rl~~--~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d~~~~~l~~~g~d~ 177 (310)
T 2uyo_A 102 GIRQFVILASG-LDSRAYRLDW--PTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQDWPPALRSAGFDP 177 (310)
T ss_dssp TCCEEEEETCT-TCCHHHHSCC--CTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTSCHHHHHHHTTCCT
T ss_pred CCCeEEEeCCC-CCchhhhccC--CCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHhhHHHHHHhccCCC
Confidence 34689999999 7877666542 2468999999 79999999999986542 14678999999875 11111 2344
Q ss_pred ---eeehh--hhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 205 ---CIFLA--ALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 205 ---~V~~a--alvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
++|++ .+.-++.+.-..+++.+.....||+.|++..
T Consensus 178 ~~Pt~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~ 218 (310)
T 2uyo_A 178 SARTAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVET 218 (310)
T ss_dssp TSCEEEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEC
T ss_pred CCCEEEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEe
Confidence 33333 2335566777889999999999999999874
No 382
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=96.95 E-value=0.00095 Score=62.20 Aligned_cols=97 Identities=10% Similarity=0.063 Sum_probs=65.4
Q ss_pred CCCCEEEEecc-CCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcC--CCcce
Q 042119 129 VQPKKVAFVGS-GPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQL--GEYDC 205 (286)
Q Consensus 129 ~~~~~VL~IG~-G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l--~~fD~ 205 (286)
.++++||.+|+ |++|+.++.+|+. .|++|+++. +++..+++++ +| ...-+.+...|..+....+ +++|+
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~--~Ga~Vi~~~-~~~~~~~~~~----lG-a~~vi~~~~~~~~~~v~~~t~g~~d~ 234 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRL--SGYIPIATC-SPHNFDLAKS----RG-AEEVFDYRAPNLAQTIRTYTKNNLRY 234 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHH--TTCEEEEEE-CGGGHHHHHH----TT-CSEEEETTSTTHHHHHHHHTTTCCCE
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHH--CCCEEEEEe-CHHHHHHHHH----cC-CcEEEECCCchHHHHHHHHccCCccE
Confidence 78899999999 8899999999994 789999985 8887776654 67 2212222222222211111 35999
Q ss_pred eehhhhccCChhHHHHHHHHHHhhc-cCCcEEEEee
Q 042119 206 IFLAALVGMSKEEKLTILGHIRKYM-KDGGILLVRS 240 (286)
Q Consensus 206 V~~aalvg~~~~~k~~vl~~l~~~l-~pgg~lv~r~ 240 (286)
||.+.-- ...++...+.| ++||+++.-.
T Consensus 235 v~d~~g~-------~~~~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 235 ALDCITN-------VESTTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp EEESSCS-------HHHHHHHHHHSCTTCEEEEESS
T ss_pred EEECCCc-------hHHHHHHHHHhhcCCCEEEEEe
Confidence 9965421 13566777888 6999998754
No 383
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=96.86 E-value=0.0031 Score=60.12 Aligned_cols=96 Identities=14% Similarity=0.076 Sum_probs=70.1
Q ss_pred CCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchh----hcCCCcce
Q 042119 130 QPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVK----EQLGEYDC 205 (286)
Q Consensus 130 ~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~----~~l~~fD~ 205 (286)
...+|+.+|+|.+|.......+. .|..|+.||.|++.++.+++ .| +.++.||+.+.. ..+...|+
T Consensus 3 ~~~~viIiG~Gr~G~~va~~L~~--~g~~vvvId~d~~~v~~~~~----~g-----~~vi~GDat~~~~L~~agi~~A~~ 71 (413)
T 3l9w_A 3 HGMRVIIAGFGRFGQITGRLLLS--SGVKMVVLDHDPDHIETLRK----FG-----MKVFYGDATRMDLLESAGAAKAEV 71 (413)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHH--TTCCEEEEECCHHHHHHHHH----TT-----CCCEESCTTCHHHHHHTTTTTCSE
T ss_pred CCCeEEEECCCHHHHHHHHHHHH--CCCCEEEEECCHHHHHHHHh----CC-----CeEEEcCCCCHHHHHhcCCCccCE
Confidence 45789999999988776655542 68999999999999988764 45 457889997642 13457898
Q ss_pred eehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 206 IFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 206 V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
|+++.- .......+-...+.+.|+..+++|.
T Consensus 72 viv~~~----~~~~n~~i~~~ar~~~p~~~Iiara 102 (413)
T 3l9w_A 72 LINAID----DPQTNLQLTEMVKEHFPHLQIIARA 102 (413)
T ss_dssp EEECCS----SHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred EEECCC----ChHHHHHHHHHHHHhCCCCeEEEEE
Confidence 886532 1344455667777889999999985
No 384
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=96.80 E-value=0.0052 Score=54.55 Aligned_cols=91 Identities=15% Similarity=0.126 Sum_probs=60.7
Q ss_pred CEEEEeccCCChhhHHHHHhhcCCCc--EEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCC-Ccceeeh
Q 042119 132 KKVAFVGSGPMPLTSIIMAKHHLTST--HFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLG-EYDCIFL 208 (286)
Q Consensus 132 ~~VL~IG~G~lp~tai~lA~~~~~g~--~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~-~fD~V~~ 208 (286)
++|.+||+|.+|.+....... .|. +|+++|.+++..+.++ ..| ... . ...|..+ ... +.|+|++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~--~g~~~~V~~~d~~~~~~~~~~----~~g-~~~--~-~~~~~~~---~~~~~aDvVil 68 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRR--SGFKGKIYGYDINPESISKAV----DLG-IID--E-GTTSIAK---VEDFSPDFVML 68 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHH--TTCCSEEEEECSCHHHHHHHH----HTT-SCS--E-EESCGGG---GGGTCCSEEEE
T ss_pred cEEEEEecCHHHHHHHHHHHh--cCCCcEEEEEeCCHHHHHHHH----HCC-Ccc--c-ccCCHHH---HhcCCCCEEEE
Confidence 489999999988765443332 455 8999999999877654 356 221 1 1233322 335 7899998
Q ss_pred hhhccCChhHHHHHHHHHHhhccCCcEEEEe
Q 042119 209 AALVGMSKEEKLTILGHIRKYMKDGGILLVR 239 (286)
Q Consensus 209 aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r 239 (286)
+.-. ..-.++++.+.+.++||.+++.-
T Consensus 69 avp~----~~~~~v~~~l~~~l~~~~iv~~~ 95 (281)
T 2g5c_A 69 SSPV----RTFREIAKKLSYILSEDATVTDQ 95 (281)
T ss_dssp CSCH----HHHHHHHHHHHHHSCTTCEEEEC
T ss_pred cCCH----HHHHHHHHHHHhhCCCCcEEEEC
Confidence 7432 34457888888899999876653
No 385
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=96.80 E-value=0.0048 Score=56.58 Aligned_cols=109 Identities=11% Similarity=0.155 Sum_probs=70.3
Q ss_pred HhcCCCCCCEEEEeccCCChhhHHHHHhhcCCCc-EEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEc-cccchhhcCC
Q 042119 124 SENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTST-HFDNFDIDEAANDVARSIVASDAEFEGRMKFLTR-DIMEVKEQLG 201 (286)
Q Consensus 124 ~~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~-~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~-D~~~~~~~l~ 201 (286)
.+..+.++.+|+|+||+|+|.|-.+..+ .|+ .|.|+|+-..--+.= .+++.+| . .-|.|..+ |+..++. .
T Consensus 88 ~~~~l~~~~~VlDLGaapGGwsq~~~~~---~gv~~V~avdvG~~~he~P-~~~~ql~-w-~lV~~~~~~Dv~~l~~--~ 159 (321)
T 3lkz_A 88 ERRFLEPVGKVIDLGCGRGGWCYYMATQ---KRVQEVRGYTKGGPGHEEP-QLVQSYG-W-NIVTMKSGVDVFYRPS--E 159 (321)
T ss_dssp HTTSCCCCEEEEEETCTTCHHHHHHTTC---TTEEEEEEECCCSTTSCCC-CCCCBTT-G-GGEEEECSCCTTSSCC--C
T ss_pred HhcCCCCCCEEEEeCCCCCcHHHHHHhh---cCCCEEEEEEcCCCCccCc-chhhhcC-C-cceEEEeccCHhhCCC--C
Confidence 3556788899999999999998655544 454 599999985511000 0012333 1 34888888 8866554 4
Q ss_pred Ccceeehhhhc--cCChhHH---HHHHHHHHhhccCC-cEEEEee
Q 042119 202 EYDCIFLAALV--GMSKEEK---LTILGHIRKYMKDG-GILLVRS 240 (286)
Q Consensus 202 ~fD~V~~aalv--g~~~~~k---~~vl~~l~~~l~pg-g~lv~r~ 240 (286)
.+|.|+.+..= +-+.-+. .++|+-+.+.|++| |-+++.-
T Consensus 160 ~~D~ivcDigeSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KV 204 (321)
T 3lkz_A 160 CCDTLLCDIGESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKV 204 (321)
T ss_dssp CCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEE
T ss_pred CCCEEEEECccCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEE
Confidence 69999866431 1111122 34777778899998 8888854
No 386
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=96.78 E-value=0.0056 Score=55.75 Aligned_cols=100 Identities=18% Similarity=0.202 Sum_probs=62.3
Q ss_pred CEEEEeccCCChhhHHHHHhhcCCCc--EEEEEeCChHHHHH-HHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeeh
Q 042119 132 KKVAFVGSGPMPLTSIIMAKHHLTST--HFDNFDIDEAANDV-ARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFL 208 (286)
Q Consensus 132 ~~VL~IG~G~lp~tai~lA~~~~~g~--~V~~iDid~~ai~~-Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~ 208 (286)
++|..||+|.+|.+....... .|. +|+.+|++++.++- +.++..... +...+++...|. .++.+.|+|++
T Consensus 1 mkI~VIGaG~vG~~la~~la~--~g~~~eV~L~D~~~~~~~~~~~~l~~~~~-~~~~~~i~~~~~----~a~~~aDvVIi 73 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVL--RGSCSELVLVDRDEDRAQAEAEDIAHAAP-VSHGTRVWHGGH----SELADAQVVIL 73 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCCSEEEEECSSHHHHHHHHHHHTTSCC-TTSCCEEEEECG----GGGTTCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHh--CCCCCEEEEEeCCHHHHHHHHHhhhhhhh-hcCCeEEEECCH----HHhCCCCEEEE
Confidence 489999999998876554442 455 89999999986653 333322222 123445544342 34568999998
Q ss_pred hhhccC------------ChhHHHHHHHHHHhhccCCcEEEEe
Q 042119 209 AALVGM------------SKEEKLTILGHIRKYMKDGGILLVR 239 (286)
Q Consensus 209 aalvg~------------~~~~k~~vl~~l~~~l~pgg~lv~r 239 (286)
++-+.. +.+-+.++.+.+.+. .|++.+++-
T Consensus 74 ~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~~~vi~~ 115 (304)
T 2v6b_A 74 TAGANQKPGESRLDLLEKNADIFRELVPQITRA-APDAVLLVT 115 (304)
T ss_dssp CC------------CHHHHHHHHHHHHHHHHHH-CSSSEEEEC
T ss_pred cCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHh-CCCeEEEEe
Confidence 864311 112346777788877 699988763
No 387
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=96.77 E-value=0.0071 Score=53.53 Aligned_cols=89 Identities=13% Similarity=0.081 Sum_probs=60.2
Q ss_pred CEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeehhhh
Q 042119 132 KKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFLAAL 211 (286)
Q Consensus 132 ~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~aal 211 (286)
++|.+||+|.+|.+...... ..|.+|+++|.+++..+.++ +.| ... + ...|..+ . .+.|+|+++.-
T Consensus 1 m~i~iiG~G~~G~~~a~~l~--~~g~~V~~~~~~~~~~~~~~----~~g-~~~--~-~~~~~~~---~-~~~D~vi~av~ 66 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLR--RRGHYLIGVSRQQSTCEKAV----ERQ-LVD--E-AGQDLSL---L-QTAKIIFLCTP 66 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHH--HTTCEEEEECSCHHHHHHHH----HTT-SCS--E-EESCGGG---G-TTCSEEEECSC
T ss_pred CEEEEEcCcHHHHHHHHHHH--HCCCEEEEEECCHHHHHHHH----hCC-CCc--c-ccCCHHH---h-CCCCEEEEECC
Confidence 47999999988865433222 15779999999998876653 346 221 2 2334333 2 57899998743
Q ss_pred ccCChhHHHHHHHHHHhhccCCcEEEE
Q 042119 212 VGMSKEEKLTILGHIRKYMKDGGILLV 238 (286)
Q Consensus 212 vg~~~~~k~~vl~~l~~~l~pgg~lv~ 238 (286)
......+++.+.+.++||.+++-
T Consensus 67 ----~~~~~~~~~~l~~~~~~~~~vv~ 89 (279)
T 2f1k_A 67 ----IQLILPTLEKLIPHLSPTAIVTD 89 (279)
T ss_dssp ----HHHHHHHHHHHGGGSCTTCEEEE
T ss_pred ----HHHHHHHHHHHHhhCCCCCEEEE
Confidence 24556788899999999887654
No 388
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=96.76 E-value=0.004 Score=60.04 Aligned_cols=101 Identities=24% Similarity=0.267 Sum_probs=66.6
Q ss_pred CEEEEeccCCChhhHH-HHHhhcCCCcEEEEEeCChHHHHHHHHH------------HHhcCCCCCCeEEEEccccchhh
Q 042119 132 KKVAFVGSGPMPLTSI-IMAKHHLTSTHFDNFDIDEAANDVARSI------------VASDAEFEGRMKFLTRDIMEVKE 198 (286)
Q Consensus 132 ~~VL~IG~G~lp~tai-~lA~~~~~g~~V~~iDid~~ai~~Ar~~------------~~~~g~l~~~i~f~~~D~~~~~~ 198 (286)
++|.+||+|.+|.... .|++ .|.+|+++|++++.++..++- +++.- -..++++. .|..+
T Consensus 3 mkI~VIG~G~vG~~lA~~La~---~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~-~~~~l~~t-~d~~e--- 74 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAE---LGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNV-KAGRLRFG-TEIEQ--- 74 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHH---TTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHH-HTTSEEEE-SCHHH---
T ss_pred CEEEEECcCHHHHHHHHHHHh---cCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhc-ccCcEEEE-CCHHH---
Confidence 6899999998887643 4454 689999999999988776551 11000 01345542 34332
Q ss_pred cCCCcceeehhhhccC------ChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 199 QLGEYDCIFLAALVGM------SKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 199 ~l~~fD~V~~aalvg~------~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
...+.|+||++.--.. +...-..+++.+.+.+++|.+++..+
T Consensus 75 a~~~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~S 122 (450)
T 3gg2_A 75 AVPEADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKS 122 (450)
T ss_dssp HGGGCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECS
T ss_pred HHhcCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEee
Confidence 2346899997742210 11256788999999999999888876
No 389
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=96.74 E-value=0.0022 Score=58.55 Aligned_cols=97 Identities=19% Similarity=0.280 Sum_probs=65.1
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeeh
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFL 208 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~ 208 (286)
...++|.+||+|.+|-+ +...- . .|..|+.+|+++++++.+.+.+... .-.++++. .|.. +..+.|+|+.
T Consensus 10 ~~~~~V~vIG~G~MG~~-iA~~l-a-aG~~V~v~d~~~~~~~~~~~~l~~~--~~~~i~~~-~~~~----~~~~aDlVie 79 (293)
T 1zej_A 10 HHHMKVFVIGAGLMGRG-IAIAI-A-SKHEVVLQDVSEKALEAAREQIPEE--LLSKIEFT-TTLE----KVKDCDIVME 79 (293)
T ss_dssp --CCEEEEECCSHHHHH-HHHHH-H-TTSEEEEECSCHHHHHHHHHHSCGG--GGGGEEEE-SSCT----TGGGCSEEEE
T ss_pred cCCCeEEEEeeCHHHHH-HHHHH-H-cCCEEEEEECCHHHHHHHHHHHHHH--HhCCeEEe-CCHH----HHcCCCEEEE
Confidence 45689999999988764 22222 3 5889999999999999888762111 01245543 3332 2457899997
Q ss_pred hhhccCChhHHHHHHHHHHhhccCCcEEEEe
Q 042119 209 AALVGMSKEEKLTILGHIRKYMKDGGILLVR 239 (286)
Q Consensus 209 aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r 239 (286)
+.. -+.+-|..++.++.+. ||.+++..
T Consensus 80 avp--e~~~vk~~l~~~l~~~--~~~Ilasn 106 (293)
T 1zej_A 80 AVF--EDLNTKVEVLREVERL--TNAPLCSN 106 (293)
T ss_dssp CCC--SCHHHHHHHHHHHHTT--CCSCEEEC
T ss_pred cCc--CCHHHHHHHHHHHhcC--CCCEEEEE
Confidence 753 2456688898888766 88888654
No 390
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=96.72 E-value=0.011 Score=52.74 Aligned_cols=94 Identities=17% Similarity=0.149 Sum_probs=59.4
Q ss_pred CEEEEeccCCChhhHHH-HHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEE---------EEccccchhhcCC
Q 042119 132 KKVAFVGSGPMPLTSII-MAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKF---------LTRDIMEVKEQLG 201 (286)
Q Consensus 132 ~~VL~IG~G~lp~tai~-lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f---------~~~D~~~~~~~l~ 201 (286)
++|++||+|.+|..... |++ .|.+|+.+|++++.++..++. | + .+.. ...+..+....+.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~---~g~~V~~~~r~~~~~~~~~~~----g-~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQ---GGNDVTLIDQWPAHIEAIRKN----G-L--IADFNGEEVVANLPIFSPEEIDHQNE 73 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHH---TTCEEEEECSCHHHHHHHHHH----C-E--EEEETTEEEEECCCEECGGGCCTTSC
T ss_pred CeEEEECcCHHHHHHHHHHHh---CCCcEEEEECCHHHHHHHHhC----C-E--EEEeCCCeeEecceeecchhhcccCC
Confidence 58999999988765333 333 678999999999877655432 4 1 1110 0001111122223
Q ss_pred CcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEe
Q 042119 202 EYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVR 239 (286)
Q Consensus 202 ~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r 239 (286)
++|+|+++.- ...-.++++.+.+.++||..++.-
T Consensus 74 ~~d~vi~~v~----~~~~~~v~~~l~~~l~~~~~iv~~ 107 (316)
T 2ew2_A 74 QVDLIIALTK----AQQLDAMFKAIQPMITEKTYVLCL 107 (316)
T ss_dssp CCSEEEECSC----HHHHHHHHHHHGGGCCTTCEEEEC
T ss_pred CCCEEEEEec----cccHHHHHHHHHHhcCCCCEEEEe
Confidence 7999998743 234567888999999888876654
No 391
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=96.69 E-value=0.008 Score=51.40 Aligned_cols=95 Identities=7% Similarity=-0.031 Sum_probs=64.9
Q ss_pred CEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchh----hcCCCcceee
Q 042119 132 KKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVK----EQLGEYDCIF 207 (286)
Q Consensus 132 ~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~----~~l~~fD~V~ 207 (286)
++|+.+|+|.+|........ ..|..|+.+|.|++.++...+ ..| +.++.+|+.+.. ....++|+|+
T Consensus 1 M~iiIiG~G~~G~~la~~L~--~~g~~v~vid~~~~~~~~l~~---~~~-----~~~i~gd~~~~~~l~~a~i~~ad~vi 70 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSML--SRKYGVVIINKDRELCEEFAK---KLK-----ATIIHGDGSHKEILRDAEVSKNDVVV 70 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHH--HTTCCEEEEESCHHHHHHHHH---HSS-----SEEEESCTTSHHHHHHHTCCTTCEEE
T ss_pred CEEEEECCCHHHHHHHHHHH--hCCCeEEEEECCHHHHHHHHH---HcC-----CeEEEcCCCCHHHHHhcCcccCCEEE
Confidence 47999999987766444333 268999999999998765332 234 578999987632 1356799988
Q ss_pred hhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 208 LAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 208 ~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
.+.- + ......+..+.+.+.|...++.|.
T Consensus 71 ~~~~---~-d~~n~~~~~~a~~~~~~~~iia~~ 99 (218)
T 3l4b_C 71 ILTP---R-DEVNLFIAQLVMKDFGVKRVVSLV 99 (218)
T ss_dssp ECCS---C-HHHHHHHHHHHHHTSCCCEEEECC
T ss_pred EecC---C-cHHHHHHHHHHHHHcCCCeEEEEE
Confidence 6532 1 233445666777777888888874
No 392
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=96.68 E-value=0.0077 Score=61.66 Aligned_cols=100 Identities=17% Similarity=0.235 Sum_probs=72.3
Q ss_pred CEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhc-----------CC--CCCCeEEEEccccchhh
Q 042119 132 KKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASD-----------AE--FEGRMKFLTRDIMEVKE 198 (286)
Q Consensus 132 ~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~-----------g~--l~~~i~f~~~D~~~~~~ 198 (286)
++|..||+|.+|-.-...+ +..|..|+-+|+++++++.+++.+++. +. ...++++. .| ..
T Consensus 317 ~~v~ViGaG~MG~gIA~~~--a~aG~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~-~~----~~ 389 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISF--ARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFS-SS----TK 389 (742)
T ss_dssp CEEEEECCSHHHHHHHHHH--HTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEEE-SC----GG
T ss_pred cEEEEEcccHHHHHHHHHH--HhCCCchhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhccc-Cc----HH
Confidence 6999999998875433322 248999999999999999998876431 10 11233332 22 23
Q ss_pred cCCCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 199 QLGEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 199 ~l~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
++.+.|+|+.+.. .+.+-|.+++.++-++++|+.+|...+
T Consensus 390 ~l~~aDlVIEAV~--E~l~iK~~vf~~le~~~~~~aIlASNT 429 (742)
T 3zwc_A 390 ELSTVDLVVEAVF--EDMNLKKKVFAELSALCKPGAFLCTNT 429 (742)
T ss_dssp GGGSCSEEEECCC--SCHHHHHHHHHHHHHHSCTTCEEEECC
T ss_pred HHhhCCEEEEecc--ccHHHHHHHHHHHhhcCCCCceEEecC
Confidence 4567899997643 466899999999999999999888764
No 393
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=96.66 E-value=0.0015 Score=65.74 Aligned_cols=129 Identities=19% Similarity=0.228 Sum_probs=83.0
Q ss_pred cCccchhhhhHHHHHHHHhcC--------CCCCCEEEEeccCCChhhHHHHHhhc---------CC--CcEEEEEeCCh-
Q 042119 107 PYYGNYVKLSKLEYTILSENG--------VVQPKKVAFVGSGPMPLTSIIMAKHH---------LT--STHFDNFDIDE- 166 (286)
Q Consensus 107 py~~ny~~l~~~E~~~l~~~~--------~~~~~~VL~IG~G~lp~tai~lA~~~---------~~--g~~V~~iDid~- 166 (286)
.||.+.-.+.+.++--+...+ ..++-+|+++|-| +|+..+.+.+.. .+ ..+++.++..|
T Consensus 27 ~y~s~~~~~~e~~~~f~~~~~l~~~~~~~~~~~~~i~e~gfG-~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~ 105 (689)
T 3pvc_A 27 IYFSNEDGLEETHHVFLKGNGFPARFASHPQQSCIFAETGFG-TGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPL 105 (689)
T ss_dssp --CCSTTSHHHHHHHTTTTTTTTHHHHHCCSSEEEEEEECCT-TSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCC
T ss_pred cccCCcCHHHhhHhhccccCCHHHHHhhCCCCceEEEEecCc-hHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCC
Confidence 666666666544443221111 2355799999999 689888776631 01 26799999955
Q ss_pred --HHHHH-----------HHHHHHhcCC---------CC---CCeEEEEccccchhhcC-----CCcceeehhhhccCCh
Q 042119 167 --AANDV-----------ARSIVASDAE---------FE---GRMKFLTRDIMEVKEQL-----GEYDCIFLAALVGMSK 216 (286)
Q Consensus 167 --~ai~~-----------Ar~~~~~~g~---------l~---~~i~f~~~D~~~~~~~l-----~~fD~V~~aalvg~~~ 216 (286)
+-+.. ++++++.... +. -++++..||+.+....+ ..||++|++.+-
T Consensus 106 ~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~---- 181 (689)
T 3pvc_A 106 HVADLASAHARWPELASFAEQLRAQWPLPLAGCHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFA---- 181 (689)
T ss_dssp CHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSEEEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSC----
T ss_pred CHHHHHHHHHhCcchhHHHHHHHHhCcccCCCceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCC----
Confidence 33332 2344443320 11 26788999998877665 469999999875
Q ss_pred hHH------HHHHHHHHhhccCCcEEEEee
Q 042119 217 EEK------LTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 217 ~~k------~~vl~~l~~~l~pgg~lv~r~ 240 (286)
+.| .+++..+.+.++|||++...+
T Consensus 182 p~~np~~w~~~~~~~l~~~~~~g~~~~t~~ 211 (689)
T 3pvc_A 182 PAKNPDMWNEQLFNAMARMTRPGGTFSTFT 211 (689)
T ss_dssp C--CCTTCSHHHHHHHHHHEEEEEEEEESC
T ss_pred CCCChhhhhHHHHHHHHHHhCCCCEEEecc
Confidence 455 789999999999999988754
No 394
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=96.64 E-value=0.0037 Score=60.69 Aligned_cols=104 Identities=21% Similarity=0.313 Sum_probs=69.0
Q ss_pred CCCCEEEEeccCCChhh-HHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHh---cCCC---------CCCeEEEEccccc
Q 042119 129 VQPKKVAFVGSGPMPLT-SIIMAKHHLTSTHFDNFDIDEAANDVARSIVAS---DAEF---------EGRMKFLTRDIME 195 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~t-ai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~---~g~l---------~~~i~f~~~D~~~ 195 (286)
....+|.+||+|.+|.. +..||+ .|.+|+++|+|++.++..++-... .| + ..++++ +.|..+
T Consensus 6 ~~~~~I~VIG~G~vG~~lA~~la~---~G~~V~~~d~~~~~v~~l~~~~~~i~e~g-l~~~l~~~~~~~~l~~-ttd~~~ 80 (478)
T 2y0c_A 6 HGSMNLTIIGSGSVGLVTGACLAD---IGHDVFCLDVDQAKIDILNNGGVPIHEPG-LKEVIARNRSAGRLRF-STDIEA 80 (478)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHH---TTCEEEEECSCHHHHHHHHTTCCSSCCTT-HHHHHHHHHHTTCEEE-ECCHHH
T ss_pred CCCceEEEECcCHHHHHHHHHHHh---CCCEEEEEECCHHHHHHHHCCCCCcCCCC-HHHHHHHhcccCCEEE-ECCHHH
Confidence 34689999999988875 456666 688999999999988876652100 01 0 124554 234322
Q ss_pred hhhcCCCcceeehhhhcc------CChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 196 VKEQLGEYDCIFLAALVG------MSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 196 ~~~~l~~fD~V~~aalvg------~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
.....|+||++.--. .+......+++.+.+.++||.+++..+
T Consensus 81 ---a~~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~~S 128 (478)
T 2y0c_A 81 ---AVAHGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDKS 128 (478)
T ss_dssp ---HHHHCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECS
T ss_pred ---HhhcCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEEeC
Confidence 234679999774210 022567789999999999999887765
No 395
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=96.63 E-value=0.015 Score=52.60 Aligned_cols=103 Identities=19% Similarity=0.209 Sum_probs=60.3
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCc--EEEEEeCChHHHH-HHHHHHHhcCCCCCCeEEEEc-cccchhhcCCCcc
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTST--HFDNFDIDEAAND-VARSIVASDAEFEGRMKFLTR-DIMEVKEQLGEYD 204 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~--~V~~iDid~~ai~-~Ar~~~~~~g~l~~~i~f~~~-D~~~~~~~l~~fD 204 (286)
+.+++|+.||+|.+|.+...... ..|. +|+.+|++++.++ .+.++.+... +....++... |. ..+.++|
T Consensus 5 ~~~mkI~IiGaG~vG~~~a~~l~--~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~----~~~~~aD 77 (319)
T 1lld_A 5 VKPTKLAVIGAGAVGSTLAFAAA--QRGIAREIVLEDIAKERVEAEVLDMQHGSS-FYPTVSIDGSDDP----EICRDAD 77 (319)
T ss_dssp --CCEEEEECCSHHHHHHHHHHH--HTTCCSEEEEECSSHHHHHHHHHHHHHTGG-GSTTCEEEEESCG----GGGTTCS
T ss_pred CCCCEEEEECCCHHHHHHHHHHH--hCCCCCEEEEEeCChhHHHHHHHHHHhhhh-hcCCeEEEeCCCH----HHhCCCC
Confidence 34579999999998876544332 1455 8999999987765 2333222222 1123444433 32 2346799
Q ss_pred eeehhhhc----cCCh--------hHHHHHHHHHHhhccCCcEEEEe
Q 042119 205 CIFLAALV----GMSK--------EEKLTILGHIRKYMKDGGILLVR 239 (286)
Q Consensus 205 ~V~~aalv----g~~~--------~~k~~vl~~l~~~l~pgg~lv~r 239 (286)
+|+++.-. |++. +...++++.+.+. .|++.++.-
T Consensus 78 ~Vii~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~-~~~~~vi~~ 123 (319)
T 1lld_A 78 MVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKV-APNAIYMLI 123 (319)
T ss_dssp EEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEEC
T ss_pred EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEe
Confidence 99987632 1111 1233677777775 788877653
No 396
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=96.62 E-value=0.016 Score=51.58 Aligned_cols=109 Identities=11% Similarity=0.161 Sum_probs=70.5
Q ss_pred HhcCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEc-cccchhhcCCC
Q 042119 124 SENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTR-DIMEVKEQLGE 202 (286)
Q Consensus 124 ~~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~-D~~~~~~~l~~ 202 (286)
.++.+.++.+|+|+||+|+|.|-.+..+ ....+|.++|+-+.--+.= .+++..|- ..|+|..+ |+..++. ..
T Consensus 72 ek~~l~~g~~VvDLGaapGGWSq~~a~~--~g~~~V~avdvG~~ghe~P-~~~~s~gw--n~v~fk~gvDv~~~~~--~~ 144 (267)
T 3p8z_A 72 ERNMVIPEGRVIDLGCGRGGWSYYCAGL--KKVTEVRGYTKGGPGHEEP-VPMSTYGW--NIVKLMSGKDVFYLPP--EK 144 (267)
T ss_dssp HTTSSCCCEEEEEESCTTSHHHHHHHTS--TTEEEEEEECCCSTTSCCC-CCCCCTTT--TSEEEECSCCGGGCCC--CC
T ss_pred HhcCCCCCCEEEEcCCCCCcHHHHHHHh--cCCCEEEEEecCCCCccCc-chhhhcCc--CceEEEeccceeecCC--cc
Confidence 4556788999999999999998655544 2334699999975432100 01233442 67999999 9865444 56
Q ss_pred cceeehhhhc--cCChhHH---HHHHHHHHhhccCCcEEEEee
Q 042119 203 YDCIFLAALV--GMSKEEK---LTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 203 fD~V~~aalv--g~~~~~k---~~vl~~l~~~l~pgg~lv~r~ 240 (286)
||.|+.+..= +-+.-+. .++|+-+.+.|++ |-+++.-
T Consensus 145 ~DtllcDIgeSs~~~~vE~~RtlrvLela~~wL~~-~~fc~KV 186 (267)
T 3p8z_A 145 CDTLLCDIGESSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKV 186 (267)
T ss_dssp CSEEEECCCCCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEE
T ss_pred ccEEEEecCCCCCChhhhhhHHHHHHHHHHHhccc-CCEEEEE
Confidence 9999866321 1111122 3477777889998 6666653
No 397
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=96.62 E-value=0.0035 Score=57.71 Aligned_cols=114 Identities=16% Similarity=0.207 Sum_probs=72.0
Q ss_pred CCCCEEEEeccCCChhhHHHHHh---hcCCCc--EEEEEeCCh---------HHHHHHHHHHHhcCCC-CC--CeEEEEc
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAK---HHLTST--HFDNFDIDE---------AANDVARSIVASDAEF-EG--RMKFLTR 191 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~---~~~~g~--~V~~iDid~---------~ai~~Ar~~~~~~g~l-~~--~i~f~~~ 191 (286)
.+.-+||++|-| .|+.++...+ +..+.. +++.+|.+| ..-+..+.+....+.. .. ..++..|
T Consensus 95 ~~~~~IlE~GFG-TGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~G 173 (308)
T 3vyw_A 95 RKVIRILDVGFG-LGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLG 173 (308)
T ss_dssp CSEEEEEEECCT-TSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEES
T ss_pred CCCcEEEEeCCC-ccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEec
Confidence 344689999999 5886543221 123554 456666532 1234455555443200 12 3467889
Q ss_pred cccchhhcCC--CcceeehhhhccC-ChhH-HHHHHHHHHhhccCCcEEEEeecCc
Q 042119 192 DIMEVKEQLG--EYDCIFLAALVGM-SKEE-KLTILGHIRKYMKDGGILLVRSAKG 243 (286)
Q Consensus 192 D~~~~~~~l~--~fD~V~~aalvg~-~~~~-k~~vl~~l~~~l~pgg~lv~r~~~g 243 (286)
|+.+....+. .||++|++++-.- .++. -.++++.|++.++|||+++.=++.|
T Consensus 174 Da~~~l~~l~~~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~~~pgg~laTYtaag 229 (308)
T 3vyw_A 174 DARKRIKEVENFKADAVFHDAFSPYKNPELWTLDFLSLIKERIDEKGYWVSYSSSL 229 (308)
T ss_dssp CHHHHGGGCCSCCEEEEEECCSCTTTSGGGGSHHHHHHHHTTEEEEEEEEESCCCH
T ss_pred hHHHHHhhhcccceeEEEeCCCCcccCcccCCHHHHHHHHHHhCCCcEEEEEeCcH
Confidence 9988776664 5899999987411 1111 1579999999999999999866554
No 398
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=96.62 E-value=0.0062 Score=54.41 Aligned_cols=86 Identities=21% Similarity=0.278 Sum_probs=59.3
Q ss_pred CEEEEecc-CCChhhHHH-HHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeehh
Q 042119 132 KKVAFVGS-GPMPLTSII-MAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFLA 209 (286)
Q Consensus 132 ~~VL~IG~-G~lp~tai~-lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~a 209 (286)
++|.+||+ |.+|..... |++ .|.+|+++|++++..+..++ .| . +. .+. .....+.|+|+++
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~---~g~~V~~~~r~~~~~~~~~~----~g-~--~~----~~~---~~~~~~aDvVi~a 74 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHD---SAHHLAAIEIAPEGRDRLQG----MG-I--PL----TDG---DGWIDEADVVVLA 74 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH---SSSEEEEECCSHHHHHHHHH----TT-C--CC----CCS---SGGGGTCSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHh---CCCEEEEEECCHHHHHHHHh----cC-C--Cc----CCH---HHHhcCCCEEEEc
Confidence 58999999 988765433 333 67899999999988776554 45 2 11 132 2233578999987
Q ss_pred hhccCChhHHHHHHHHHHhhccCCcEEEE
Q 042119 210 ALVGMSKEEKLTILGHIRKYMKDGGILLV 238 (286)
Q Consensus 210 alvg~~~~~k~~vl~~l~~~l~pgg~lv~ 238 (286)
.-. ..-.++++.+.+.++||.+++-
T Consensus 75 v~~----~~~~~v~~~l~~~l~~~~ivv~ 99 (286)
T 3c24_A 75 LPD----NIIEKVAEDIVPRVRPGTIVLI 99 (286)
T ss_dssp SCH----HHHHHHHHHHGGGSCTTCEEEE
T ss_pred CCc----hHHHHHHHHHHHhCCCCCEEEE
Confidence 432 3456788888888888887665
No 399
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=96.59 E-value=0.01 Score=54.63 Aligned_cols=106 Identities=21% Similarity=0.244 Sum_probs=66.9
Q ss_pred CCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHH-HHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeeh
Q 042119 130 QPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAAND-VARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFL 208 (286)
Q Consensus 130 ~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~-~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~ 208 (286)
+..+|..||+|..|.+............+++-+|++++.++ .+..+.+... +..++++..++ ..++.+.|+|++
T Consensus 4 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~-~~~~~~v~~~~----~~a~~~aDvVii 78 (318)
T 1ez4_A 4 NHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQA-FTAPKKIYSGE----YSDCKDADLVVI 78 (318)
T ss_dssp TBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGG-GSCCCEEEECC----GGGGTTCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHH-hcCCeEEEECC----HHHhCCCCEEEE
Confidence 45799999999999887665543222358999999998777 3666655543 33567776533 234578999998
Q ss_pred hhhccCCh----h----HHHHHHHHHHhhc---cCCcEEEEee
Q 042119 209 AALVGMSK----E----EKLTILGHIRKYM---KDGGILLVRS 240 (286)
Q Consensus 209 aalvg~~~----~----~k~~vl~~l~~~l---~pgg~lv~r~ 240 (286)
++.+.... . .-..++..+.+.+ .|+|.+++-+
T Consensus 79 ~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t 121 (318)
T 1ez4_A 79 TAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA 121 (318)
T ss_dssp CCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeC
Confidence 87542111 0 0113444444432 7999988853
No 400
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=96.59 E-value=0.0071 Score=58.86 Aligned_cols=104 Identities=16% Similarity=0.289 Sum_probs=67.4
Q ss_pred CCCCEEEEeccCCChhhH-HHHHhhcCCCc-EEEEEeCChH----HHHHHHH--------------HHHhcCCCCCCeEE
Q 042119 129 VQPKKVAFVGSGPMPLTS-IIMAKHHLTST-HFDNFDIDEA----ANDVARS--------------IVASDAEFEGRMKF 188 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~ta-i~lA~~~~~g~-~V~~iDid~~----ai~~Ar~--------------~~~~~g~l~~~i~f 188 (286)
.+-++|.+||.|.+|... ..||+ .+|. +|+++|++++ .++.-++ ++++.- ...++++
T Consensus 16 ~~~mkIaVIGlG~mG~~lA~~la~--~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~-~~g~l~~ 92 (478)
T 3g79_A 16 GPIKKIGVLGMGYVGIPAAVLFAD--APCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVV-KAGKFEC 92 (478)
T ss_dssp CSCCEEEEECCSTTHHHHHHHHHH--STTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHH-HTTCEEE
T ss_pred CCCCEEEEECcCHHHHHHHHHHHH--hCCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhc-ccCCeEE
Confidence 345799999999999864 45665 1388 9999999999 6655443 111100 0135655
Q ss_pred EEccccchhhcCCCcceeehhhhcc--------CChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 189 LTRDIMEVKEQLGEYDCIFLAALVG--------MSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 189 ~~~D~~~~~~~l~~fD~V~~aalvg--------~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
. .| .+ ...+.|+||++.--. .+.+.-..+.+.+.+.++||.+++..+
T Consensus 93 t-td-~e---a~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~S 147 (478)
T 3g79_A 93 T-PD-FS---RISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLES 147 (478)
T ss_dssp E-SC-GG---GGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEECS
T ss_pred e-Cc-HH---HHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEeC
Confidence 3 34 22 334689999874321 122234567889999999999888876
No 401
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=96.59 E-value=0.0029 Score=61.09 Aligned_cols=103 Identities=19% Similarity=0.302 Sum_probs=68.3
Q ss_pred CCCEEEEeccCCChhh-HHHHHhhcCCCcEEEEEeCChHHHHHHHHH------------HHhcCCCCCCeEEEEccccch
Q 042119 130 QPKKVAFVGSGPMPLT-SIIMAKHHLTSTHFDNFDIDEAANDVARSI------------VASDAEFEGRMKFLTRDIMEV 196 (286)
Q Consensus 130 ~~~~VL~IG~G~lp~t-ai~lA~~~~~g~~V~~iDid~~ai~~Ar~~------------~~~~g~l~~~i~f~~~D~~~~ 196 (286)
..-||.+||.|-+|+. |..||+ .|.+|+++|+|++.++.-++- +++.- ...++++ +.|..+
T Consensus 7 ~~~~~~vIGlG~vG~~~A~~La~---~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~-~~g~l~~-ttd~~e- 80 (446)
T 4a7p_A 7 GSVRIAMIGTGYVGLVSGACFSD---FGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNV-KAGRLSF-TTDLAE- 80 (446)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH---TTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHH-HTTCEEE-ESCHHH-
T ss_pred CceEEEEEcCCHHHHHHHHHHHH---CCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhc-ccCCEEE-ECCHHH-
Confidence 3469999999988876 455666 689999999999987765541 11100 0134555 344322
Q ss_pred hhcCCCcceeehhhhccC-------ChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 197 KEQLGEYDCIFLAALVGM-------SKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 197 ~~~l~~fD~V~~aalvg~-------~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
...+.|+||++.-... +...-..+++.+.+.+++|.+++..+
T Consensus 81 --a~~~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~S 129 (446)
T 4a7p_A 81 --GVKDADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTKS 129 (446)
T ss_dssp --HHTTCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEECS
T ss_pred --HHhcCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEeC
Confidence 3357899998732211 11135678899999999999998876
No 402
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=96.56 E-value=0.019 Score=52.60 Aligned_cols=106 Identities=14% Similarity=0.174 Sum_probs=65.7
Q ss_pred CCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHH-HHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeeh
Q 042119 130 QPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDV-ARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFL 208 (286)
Q Consensus 130 ~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~-Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~ 208 (286)
.+.+|..||+|..|.+............+++.+|++++.++- +..+......+..++++..++ ..++.+.|+|++
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~~~----~~a~~~aDvVvi 80 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKAGE----YSDCHDADLVVI 80 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEECC----GGGGTTCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEeCC----HHHhCCCCEEEE
Confidence 457999999999888766544421223589999999987663 555444333122466666533 234578999998
Q ss_pred hhhccC----Ch--------hHHHHHHHHHHhhccCCcEEEEee
Q 042119 209 AALVGM----SK--------EEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 209 aalvg~----~~--------~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
++.++. +. +.-.++.+.+.+. .|++.+++-+
T Consensus 81 ~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~t 123 (317)
T 3d0o_A 81 CAGAAQKPGETRLDLVSKNLKIFKSIVGEVMAS-KFDGIFLVAT 123 (317)
T ss_dssp CCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHT-TCCSEEEECS
T ss_pred CCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEec
Confidence 875422 11 1112344444445 8999988853
No 403
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=96.56 E-value=0.009 Score=55.17 Aligned_cols=108 Identities=19% Similarity=0.172 Sum_probs=67.5
Q ss_pred CCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHH-HHHHHHhcCCCCCCeEEEEccccchhhcCCCccee
Q 042119 128 VVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDV-ARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCI 206 (286)
Q Consensus 128 ~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~-Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V 206 (286)
.++..||..||+|..|.+...+........+++-+|++++.++- +..+.+... +..++++..++ ..++.+.|+|
T Consensus 6 ~~~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~-~~~~~~i~~~~----~~a~~~aDvV 80 (326)
T 2zqz_A 6 DKDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALP-FTSPKKIYSAE----YSDAKDADLV 80 (326)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGG-GSCCCEEEECC----GGGGGGCSEE
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHH-hcCCeEEEECC----HHHhCCCCEE
Confidence 35668999999999998876655422223589999999987754 555555443 33567776543 2345678999
Q ss_pred ehhhhcc----CChhHH----HHHHHHHHhhc---cCCcEEEEee
Q 042119 207 FLAALVG----MSKEEK----LTILGHIRKYM---KDGGILLVRS 240 (286)
Q Consensus 207 ~~aalvg----~~~~~k----~~vl~~l~~~l---~pgg~lv~r~ 240 (286)
++.+.+. |+..+. ..++..+.+.+ .|+|.+++-+
T Consensus 81 ii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t 125 (326)
T 2zqz_A 81 VITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAA 125 (326)
T ss_dssp EECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeC
Confidence 9887542 211111 13444444332 7999988853
No 404
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=96.54 E-value=0.0074 Score=61.60 Aligned_cols=98 Identities=20% Similarity=0.189 Sum_probs=67.7
Q ss_pred CEEEEeccCCChhhHH-HHHhhcCCCcEEEEEeCChHHHHHHHHHHHhc-------CC--------CCCCeEEEEccccc
Q 042119 132 KKVAFVGSGPMPLTSI-IMAKHHLTSTHFDNFDIDEAANDVARSIVASD-------AE--------FEGRMKFLTRDIME 195 (286)
Q Consensus 132 ~~VL~IG~G~lp~tai-~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~-------g~--------l~~~i~f~~~D~~~ 195 (286)
++|.+||+|.+|.+-. .+++ .|.+|+.+|++++.++.+++.++.. |. ...++++. .|.
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~---aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~-~d~-- 386 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALIL---SNYPVILKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGS-LDY-- 386 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHT---TTCCEEEECSSHHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEE-SSS--
T ss_pred cEEEEEcCCHhhHHHHHHHHh---CCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEe-CCH--
Confidence 5799999999886533 3444 6889999999999998876543221 10 01245543 333
Q ss_pred hhhcCCCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEe
Q 042119 196 VKEQLGEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVR 239 (286)
Q Consensus 196 ~~~~l~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r 239 (286)
..+.+.|+|+.+.. .+.+-|..++.++.+.++||.+++..
T Consensus 387 --~~~~~aDlVIeaVp--e~~~vk~~v~~~l~~~~~~~~Ilasn 426 (725)
T 2wtb_A 387 --ESFRDVDMVIEAVI--ENISLKQQIFADLEKYCPQHCILASN 426 (725)
T ss_dssp --GGGTTCSEEEECCC--SCHHHHHHHHHHHHHHSCTTCEEEEC
T ss_pred --HHHCCCCEEEEcCc--CCHHHHHHHHHHHHhhCCCCcEEEeC
Confidence 24567899998743 24456889999999999999877554
No 405
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=96.53 E-value=0.0067 Score=54.08 Aligned_cols=92 Identities=14% Similarity=0.205 Sum_probs=60.5
Q ss_pred CCEEEEeccCCChhhHHH-HHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeehh
Q 042119 131 PKKVAFVGSGPMPLTSII-MAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFLA 209 (286)
Q Consensus 131 ~~~VL~IG~G~lp~tai~-lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~a 209 (286)
.++|.+||+|.+|.+... +++ ...+.+|+++|++++..+.+++ .| ... ..+.|..+ ...+.|+|+++
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~-~g~~~~V~~~d~~~~~~~~~~~----~g-~~~---~~~~~~~~---~~~~aDvVila 73 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKR-DHPHYKIVGYNRSDRSRDIALE----RG-IVD---EATADFKV---FAALADVIILA 73 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-HCTTSEEEEECSSHHHHHHHHH----TT-SCS---EEESCTTT---TGGGCSEEEEC
T ss_pred cceEEEEeeCHHHHHHHHHHHh-CCCCcEEEEEcCCHHHHHHHHH----cC-Ccc---cccCCHHH---hhcCCCEEEEc
Confidence 368999999988876433 333 2337899999999988776543 46 211 12233322 23468999987
Q ss_pred hhccCChhHHHHHHHHHHhh-ccCCcEEEE
Q 042119 210 ALVGMSKEEKLTILGHIRKY-MKDGGILLV 238 (286)
Q Consensus 210 alvg~~~~~k~~vl~~l~~~-l~pgg~lv~ 238 (286)
.-. ..-.++++.+.+. ++||.+++.
T Consensus 74 vp~----~~~~~v~~~l~~~~l~~~~ivi~ 99 (290)
T 3b1f_A 74 VPI----KKTIDFIKILADLDLKEDVIITD 99 (290)
T ss_dssp SCH----HHHHHHHHHHHTSCCCTTCEEEC
T ss_pred CCH----HHHHHHHHHHHhcCCCCCCEEEE
Confidence 432 3336788888888 888887764
No 406
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=96.53 E-value=0.0045 Score=57.90 Aligned_cols=94 Identities=15% Similarity=0.181 Sum_probs=63.8
Q ss_pred CCCEEEEeccCCChhhH-HHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeeh
Q 042119 130 QPKKVAFVGSGPMPLTS-IIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFL 208 (286)
Q Consensus 130 ~~~~VL~IG~G~lp~ta-i~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~ 208 (286)
..++|.+||+|.+|... ..|++ .|.+|+++|++++.++...+ .|. . .+.|..++.......|+||+
T Consensus 21 ~~mkIgiIGlG~mG~~~A~~L~~---~G~~V~v~dr~~~~~~~l~~----~g~-----~-~~~s~~e~~~~a~~~DvVi~ 87 (358)
T 4e21_A 21 QSMQIGMIGLGRMGADMVRRLRK---GGHECVVYDLNVNAVQALER----EGI-----A-GARSIEEFCAKLVKPRVVWL 87 (358)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHH---TTCEEEEECSCHHHHHHHHT----TTC-----B-CCSSHHHHHHHSCSSCEEEE
T ss_pred cCCEEEEECchHHHHHHHHHHHh---CCCEEEEEeCCHHHHHHHHH----CCC-----E-EeCCHHHHHhcCCCCCEEEE
Confidence 35799999999888753 33444 68999999999988765443 351 1 12444444444445699997
Q ss_pred hhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 209 AALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 209 aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
+.-- ..-..+++.+.+.++||.+|+--+
T Consensus 88 ~vp~----~~v~~vl~~l~~~l~~g~iiId~s 115 (358)
T 4e21_A 88 MVPA----AVVDSMLQRMTPLLAANDIVIDGG 115 (358)
T ss_dssp CSCG----GGHHHHHHHHGGGCCTTCEEEECS
T ss_pred eCCH----HHHHHHHHHHHhhCCCCCEEEeCC
Confidence 6432 245578899999999988877643
No 407
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=96.52 E-value=0.0046 Score=56.83 Aligned_cols=106 Identities=22% Similarity=0.267 Sum_probs=62.5
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHH-HHHHHHhcCCCCCCeEEEEccccchhhcCCCcceee
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDV-ARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIF 207 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~-Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~ 207 (286)
+.+.+|..||+|..|.+............+|+.+|++++.++- +..+.+... +..++++..+| ..++.+.|+|+
T Consensus 5 ~~~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~-~~~~~~i~~~~----~~a~~~aDvVi 79 (318)
T 1y6j_A 5 KSRSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLP-FMGQMSLYAGD----YSDVKDCDVIV 79 (318)
T ss_dssp --CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCC-CTTCEEEC--C----GGGGTTCSEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHH-hcCCeEEEECC----HHHhCCCCEEE
Confidence 3468999999999998876655422223489999999876652 444433332 23466666433 23467899999
Q ss_pred hhhhcc----CChhH--------HHHHHHHHHhhccCCcEEEEee
Q 042119 208 LAALVG----MSKEE--------KLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 208 ~aalvg----~~~~~--------k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
+++-+. ++..+ -.++.+.+.+. .|++.+++-+
T Consensus 80 i~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~t 123 (318)
T 1y6j_A 80 VTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKY-YNHGVILVVS 123 (318)
T ss_dssp ECCCC------CHHHHHHHHHHHHHHHHHHHHHH-CCSCEEEECS
T ss_pred EcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHh-CCCcEEEEec
Confidence 877542 11111 13555666665 6999988853
No 408
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=96.52 E-value=0.012 Score=55.79 Aligned_cols=106 Identities=9% Similarity=-0.084 Sum_probs=69.8
Q ss_pred CCEEEEeccCCChhhHHHHHh-------------h--cCCCcEEEEEeCC-----------hHHHHHHHHHHHhcCCCCC
Q 042119 131 PKKVAFVGSGPMPLTSIIMAK-------------H--HLTSTHFDNFDID-----------EAANDVARSIVASDAEFEG 184 (286)
Q Consensus 131 ~~~VL~IG~G~lp~tai~lA~-------------~--~~~g~~V~~iDid-----------~~ai~~Ar~~~~~~g~l~~ 184 (286)
+.+|+|+|||.+|.|...+.. . ..|..+|..-|+- |...+..++ ..| -..
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~---~~g-~~~ 128 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEK---ENG-RKI 128 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHH---HTC-CCT
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhh---hcc-CCC
Confidence 689999999998887766654 0 1367889999988 655544322 234 123
Q ss_pred CeEEEEccccch---hhcCCCcceeehhhhccCC-hh-------------------------------------HHHHHH
Q 042119 185 RMKFLTRDIMEV---KEQLGEYDCIFLAALVGMS-KE-------------------------------------EKLTIL 223 (286)
Q Consensus 185 ~i~f~~~D~~~~---~~~l~~fD~V~~aalvg~~-~~-------------------------------------~k~~vl 223 (286)
+--|+.|....+ +.+-+.||+||-.+.++|- .. +-..+|
T Consensus 129 ~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL 208 (384)
T 2efj_A 129 GSCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFL 208 (384)
T ss_dssp TSEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 457888877653 3344689999876555551 11 011237
Q ss_pred HHHHhhccCCcEEEEee
Q 042119 224 GHIRKYMKDGGILLVRS 240 (286)
Q Consensus 224 ~~l~~~l~pgg~lv~r~ 240 (286)
+..++.|+|||++++..
T Consensus 209 ~~Ra~eL~pGG~mvl~~ 225 (384)
T 2efj_A 209 RIHSEELISRGRMLLTF 225 (384)
T ss_dssp HHHHHHEEEEEEEEEEE
T ss_pred HHHHHHhccCCeEEEEE
Confidence 77799999999999875
No 409
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=96.50 E-value=0.0011 Score=60.97 Aligned_cols=99 Identities=8% Similarity=0.049 Sum_probs=60.7
Q ss_pred hcCCCCCCEEEEecc-CCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhc--CC
Q 042119 125 ENGVVQPKKVAFVGS-GPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQ--LG 201 (286)
Q Consensus 125 ~~~~~~~~~VL~IG~-G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~--l~ 201 (286)
...++++++||..|+ |++|..++.+|+ ...+.+|++++ +++..+.++ +| ...-+. ...|..+.... -+
T Consensus 137 ~~~~~~g~~VlV~Ga~G~vG~~a~qla~-~~g~~~V~~~~-~~~~~~~~~-----~g-a~~~~~-~~~~~~~~~~~~~~~ 207 (349)
T 4a27_A 137 VANLREGMSVLVHSAGGGVGQAVAQLCS-TVPNVTVFGTA-STFKHEAIK-----DS-VTHLFD-RNADYVQEVKRISAE 207 (349)
T ss_dssp TSCCCTTCEEEESSTTSHHHHHHHHHHT-TSTTCEEEEEE-CGGGHHHHG-----GG-SSEEEE-TTSCHHHHHHHHCTT
T ss_pred hcCCCCCCEEEEEcCCcHHHHHHHHHHH-HcCCcEEEEeC-CHHHHHHHH-----cC-CcEEEc-CCccHHHHHHHhcCC
Confidence 345689999999998 999999999998 34468999998 555444443 56 221111 11122111111 13
Q ss_pred CcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 202 EYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 202 ~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
++|+||.+. |. + .++...+.|++||++++-.
T Consensus 208 g~Dvv~d~~--g~---~---~~~~~~~~l~~~G~~v~~G 238 (349)
T 4a27_A 208 GVDIVLDCL--CG---D---NTGKGLSLLKPLGTYILYG 238 (349)
T ss_dssp CEEEEEEEC--C-------------CTTEEEEEEEEEEC
T ss_pred CceEEEECC--Cc---h---hHHHHHHHhhcCCEEEEEC
Confidence 699999654 21 1 2367889999999998764
No 410
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=96.49 E-value=0.009 Score=57.00 Aligned_cols=101 Identities=15% Similarity=0.150 Sum_probs=63.4
Q ss_pred CEEEEeccCCChhhH-HHHHhhcCCCcEEEEEeCChHHHHHHHHH------------HHhcCCCCCCeEEEEccccchhh
Q 042119 132 KKVAFVGSGPMPLTS-IIMAKHHLTSTHFDNFDIDEAANDVARSI------------VASDAEFEGRMKFLTRDIMEVKE 198 (286)
Q Consensus 132 ~~VL~IG~G~lp~ta-i~lA~~~~~g~~V~~iDid~~ai~~Ar~~------------~~~~g~l~~~i~f~~~D~~~~~~ 198 (286)
++|.+||+|.+|... ..|++ .|.+|+++|++++.++..++- +.+.- -..++++ +.|..+
T Consensus 1 mkI~VIG~G~vG~~~A~~la~---~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~-~~g~l~~-t~~~~~--- 72 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSA---RGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGR-QTGRLSG-TTDFKK--- 72 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHH---TTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHH-HTTCEEE-ESCHHH---
T ss_pred CEEEEECCCHHHHHHHHHHHH---CCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhc-ccCceEE-eCCHHH---
Confidence 479999999998864 44555 688999999999988765541 11100 0124544 334322
Q ss_pred cCCCcceeehhhhccCC------hhHHHHHHHHHHhhccC---CcEEEEee
Q 042119 199 QLGEYDCIFLAALVGMS------KEEKLTILGHIRKYMKD---GGILLVRS 240 (286)
Q Consensus 199 ~l~~fD~V~~aalvg~~------~~~k~~vl~~l~~~l~p---gg~lv~r~ 240 (286)
.+...|+||++.--..+ ...-..+++.+.+.+++ |.+++..+
T Consensus 73 ~~~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~~~~iVV~~S 123 (436)
T 1mv8_A 73 AVLDSDVSFICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTVVVRS 123 (436)
T ss_dssp HHHTCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHTTCCSCCEEEECS
T ss_pred HhccCCEEEEEcCCCcccCCCcchHHHHHHHHHHHHHhcccCCCcEEEEeC
Confidence 23468999987522110 00145688999999999 77777654
No 411
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=96.48 E-value=0.01 Score=54.84 Aligned_cols=104 Identities=19% Similarity=0.194 Sum_probs=67.2
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCc-EEEEEeCChHHHHHH-HHHHH---hcCCCCCCeEEEEccccchhhcCCCc
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTST-HFDNFDIDEAANDVA-RSIVA---SDAEFEGRMKFLTRDIMEVKEQLGEY 203 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~-~V~~iDid~~ai~~A-r~~~~---~~g~l~~~i~f~~~D~~~~~~~l~~f 203 (286)
+.+.+|..||+|..|.+...+... .|. .|+.+|++++.++.. ..+.+ .++ ...++++ +.|.. ..+.+.
T Consensus 7 ~~~~kI~VIGaG~vG~~lA~~la~--~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~-~~~~i~~-t~d~~---ea~~~a 79 (331)
T 1pzg_A 7 QRRKKVAMIGSGMIGGTMGYLCAL--RELADVVLYDVVKGMPEGKALDLSHVTSVVD-TNVSVRA-EYSYE---AALTGA 79 (331)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHH--HTCCEEEEECSSSSHHHHHHHHHHHHHHHTT-CCCCEEE-ECSHH---HHHTTC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHh--CCCCeEEEEECChhHHHHHHHHHHhhhhccC-CCCEEEE-eCCHH---HHhCCC
Confidence 445799999999998875544432 444 799999999887763 32222 233 2345554 25542 245678
Q ss_pred ceeehhhhc----cC-----C--------hhHHHHHHHHHHhhccCCcEEEEee
Q 042119 204 DCIFLAALV----GM-----S--------KEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 204 D~V~~aalv----g~-----~--------~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
|+|++++.+ |+ . .+.+.++.+.+.+.. |++.+++-+
T Consensus 80 DiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~~t 132 (331)
T 1pzg_A 80 DCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYC-PKTFIIVVT 132 (331)
T ss_dssp SEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHC-TTCEEEECC
T ss_pred CEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEEc
Confidence 999988643 22 1 123778888888884 899887643
No 412
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=96.48 E-value=0.0075 Score=54.56 Aligned_cols=92 Identities=13% Similarity=0.057 Sum_probs=61.9
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeeh
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFL 208 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~ 208 (286)
-.+++|+.||+|.+|......++. .|++|+++|.+++..+.+. ..| ++... ..++...+.++|+|+.
T Consensus 155 l~g~~v~IiG~G~iG~~~a~~l~~--~G~~V~~~d~~~~~~~~~~----~~g-----~~~~~--~~~l~~~l~~aDvVi~ 221 (300)
T 2rir_A 155 IHGSQVAVLGLGRTGMTIARTFAA--LGANVKVGARSSAHLARIT----EMG-----LVPFH--TDELKEHVKDIDICIN 221 (300)
T ss_dssp STTSEEEEECCSHHHHHHHHHHHH--TTCEEEEEESSHHHHHHHH----HTT-----CEEEE--GGGHHHHSTTCSEEEE
T ss_pred CCCCEEEEEcccHHHHHHHHHHHH--CCCEEEEEECCHHHHHHHH----HCC-----CeEEc--hhhHHHHhhCCCEEEE
Confidence 468999999999999888777763 6889999999987654433 245 12221 1233444568999998
Q ss_pred hhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 209 AALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 209 aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
+.-.++- .+ ...+.|+||++++--.
T Consensus 222 ~~p~~~i--~~-----~~~~~mk~g~~lin~a 246 (300)
T 2rir_A 222 TIPSMIL--NQ-----TVLSSMTPKTLILDLA 246 (300)
T ss_dssp CCSSCCB--CH-----HHHTTSCTTCEEEECS
T ss_pred CCChhhh--CH-----HHHHhCCCCCEEEEEe
Confidence 7543321 11 2457899998876654
No 413
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=96.47 E-value=0.0067 Score=56.85 Aligned_cols=61 Identities=13% Similarity=0.132 Sum_probs=49.3
Q ss_pred CCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchh
Q 042119 130 QPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVK 197 (286)
Q Consensus 130 ~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~ 197 (286)
++..|++||.|++.+|..++.+ ....+|++||+|+..+..-++.. . .++++++.+|+.++.
T Consensus 58 ~~~~VlEIGPG~G~LT~~Ll~~--~~~~~vvavE~D~~l~~~L~~~~---~--~~~l~ii~~D~l~~~ 118 (353)
T 1i4w_A 58 EELKVLDLYPGVGIQSAIFYNK--YCPRQYSLLEKRSSLYKFLNAKF---E--GSPLQILKRDPYDWS 118 (353)
T ss_dssp TTCEEEEESCTTCHHHHHHHHH--HCCSEEEEECCCHHHHHHHHHHT---T--TSSCEEECSCTTCHH
T ss_pred CCCEEEEECCCCCHHHHHHHhh--CCCCEEEEEecCHHHHHHHHHhc---c--CCCEEEEECCccchh
Confidence 4689999999999998887754 23578999999999988887765 2 158999999997654
No 414
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=96.47 E-value=0.017 Score=52.78 Aligned_cols=103 Identities=19% Similarity=0.219 Sum_probs=66.5
Q ss_pred CEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHH-HHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeehhh
Q 042119 132 KKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDV-ARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFLAA 210 (286)
Q Consensus 132 ~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~-Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~aa 210 (286)
+||..||+|..|.+............+++-+|++++.++- +.++.+... +..++++..+| ..++.+.|+|++++
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~-~~~~~~v~~~~----~~a~~~aD~Vii~a 75 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATP-FAHPVWVWAGS----YGDLEGARAVVLAA 75 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGG-GSCCCEEEECC----GGGGTTEEEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHh-hcCCeEEEECC----HHHhCCCCEEEECC
Confidence 4899999999998876655532334689999999987763 666655443 23566776544 23467899999877
Q ss_pred hc----cCChhH----HHHHHH----HHHhhccCCcEEEEee
Q 042119 211 LV----GMSKEE----KLTILG----HIRKYMKDGGILLVRS 240 (286)
Q Consensus 211 lv----g~~~~~----k~~vl~----~l~~~l~pgg~lv~r~ 240 (286)
.+ |++..+ -..++. .+.+. .|+|.+++-+
T Consensus 76 g~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~iiv~t 116 (310)
T 2xxj_A 76 GVAQRPGETRLQLLDRNAQVFAQVVPRVLEA-APEAVLLVAT 116 (310)
T ss_dssp CCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEECS
T ss_pred CCCCCCCcCHHHHHHhhHHHHHHHHHHHHHH-CCCcEEEEec
Confidence 54 222111 023344 44444 7999988853
No 415
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=96.43 E-value=0.008 Score=57.79 Aligned_cols=100 Identities=13% Similarity=0.236 Sum_probs=65.6
Q ss_pred CCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHH------------HHhcCCCCCCeEEEEccccchh
Q 042119 130 QPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSI------------VASDAEFEGRMKFLTRDIMEVK 197 (286)
Q Consensus 130 ~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~------------~~~~g~l~~~i~f~~~D~~~~~ 197 (286)
.-++|.+||+|.+|.+...... . |.+|+++|++++.++..++- +.+ + ..++++. .|..
T Consensus 35 ~~mkIaVIGlG~mG~~lA~~La--~-G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~-~--~~~l~~t-td~~--- 104 (432)
T 3pid_A 35 EFMKITISGTGYVGLSNGVLIA--Q-NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAE-K--PLNFRAT-TDKH--- 104 (432)
T ss_dssp CCCEEEEECCSHHHHHHHHHHH--T-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHH-S--CCCEEEE-SCHH---
T ss_pred CCCEEEEECcCHHHHHHHHHHH--c-CCeEEEEecCHHHhhHHhccCCccccccHHHHHhh-c--cCCeEEE-cCHH---
Confidence 3469999999999887554443 3 89999999999998876651 111 1 1245542 3432
Q ss_pred hcCCCcceeehhhhccCC-------hhHHHHHHHHHHhhccCCcEEEEee
Q 042119 198 EQLGEYDCIFLAALVGMS-------KEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 198 ~~l~~fD~V~~aalvg~~-------~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
..+.+.|+||++.--..+ ...=..+++.+.+ ++||.+++..+
T Consensus 105 ea~~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~S 153 (432)
T 3pid_A 105 DAYRNADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKS 153 (432)
T ss_dssp HHHTTCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECS
T ss_pred HHHhCCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeC
Confidence 233578999987321110 1123567788999 99999998865
No 416
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=96.43 E-value=0.019 Score=52.93 Aligned_cols=101 Identities=17% Similarity=0.205 Sum_probs=65.3
Q ss_pred CCEEEEeccCCChhhHHHHHhhcCCCc-EEEEEeCChHHHHHHH-HHHH---hcCCCCCCeEEEEccccchhhcCCCcce
Q 042119 131 PKKVAFVGSGPMPLTSIIMAKHHLTST-HFDNFDIDEAANDVAR-SIVA---SDAEFEGRMKFLTRDIMEVKEQLGEYDC 205 (286)
Q Consensus 131 ~~~VL~IG~G~lp~tai~lA~~~~~g~-~V~~iDid~~ai~~Ar-~~~~---~~g~l~~~i~f~~~D~~~~~~~l~~fD~ 205 (286)
+.+|..||+|.+|.+...+... .|. .|+.+|++++.++... .+-+ ..+ ...++++. .|. ..+.+.|+
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~--~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~-~~~~i~~t-~d~----~al~~aD~ 85 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQ--KDLGDVYMFDIIEGVPQGKALDLNHCMALIG-SPAKIFGE-NNY----EYLQNSDV 85 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCCEEEEECSSTTHHHHHHHHHHHHHHHHT-CCCCEEEE-SCG----GGGTTCSE
T ss_pred CCEEEEECCCHHHHHHHHHHHh--CCCCeEEEEECCHHHHHHHHHHHHhHhhccC-CCCEEEEC-CCH----HHHCCCCE
Confidence 4699999999998875544432 455 7999999998887532 2222 222 12455542 443 34568899
Q ss_pred eehhhhc----cC--------ChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 206 IFLAALV----GM--------SKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 206 V~~aalv----g~--------~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
|++++-+ |+ +.+-+.++++.+.+.. |++.+++-+
T Consensus 86 VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~-p~a~viv~t 131 (328)
T 2hjr_A 86 VIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYC-PNAFVICIT 131 (328)
T ss_dssp EEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHC-TTCEEEECC
T ss_pred EEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHC-CCeEEEEec
Confidence 9988632 21 1234777888888875 899877643
No 417
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=96.42 E-value=0.011 Score=53.36 Aligned_cols=92 Identities=10% Similarity=0.044 Sum_probs=61.6
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeeh
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFL 208 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~ 208 (286)
-.+++|+.||+|.+|......++. .|++|+++|.+++..+.+. ..| +++.. ..++...+.++|+|+.
T Consensus 153 l~g~~v~IiG~G~iG~~~a~~l~~--~G~~V~~~dr~~~~~~~~~----~~g-----~~~~~--~~~l~~~l~~aDvVi~ 219 (293)
T 3d4o_A 153 IHGANVAVLGLGRVGMSVARKFAA--LGAKVKVGARESDLLARIA----EMG-----MEPFH--ISKAAQELRDVDVCIN 219 (293)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESSHHHHHHHH----HTT-----SEEEE--GGGHHHHTTTCSEEEE
T ss_pred CCCCEEEEEeeCHHHHHHHHHHHh--CCCEEEEEECCHHHHHHHH----HCC-----CeecC--hhhHHHHhcCCCEEEE
Confidence 568999999999999888777763 6889999999997654432 355 22221 1233344568999998
Q ss_pred hhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 209 AALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 209 aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
+.-.++- .+ ...+.|+||++++--.
T Consensus 220 ~~p~~~i--~~-----~~l~~mk~~~~lin~a 244 (293)
T 3d4o_A 220 TIPALVV--TA-----NVLAEMPSHTFVIDLA 244 (293)
T ss_dssp CCSSCCB--CH-----HHHHHSCTTCEEEECS
T ss_pred CCChHHh--CH-----HHHHhcCCCCEEEEec
Confidence 7543321 12 2345789998877544
No 418
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=96.37 E-value=0.02 Score=52.32 Aligned_cols=100 Identities=19% Similarity=0.235 Sum_probs=61.2
Q ss_pred CEEEEeccCCChhhHHHHHhhcCCCc--EEEEEeCChHHHHHHHHHHH-hcCCCCCCeEEEEccccchhhcCCCcceeeh
Q 042119 132 KKVAFVGSGPMPLTSIIMAKHHLTST--HFDNFDIDEAANDVARSIVA-SDAEFEGRMKFLTRDIMEVKEQLGEYDCIFL 208 (286)
Q Consensus 132 ~~VL~IG~G~lp~tai~lA~~~~~g~--~V~~iDid~~ai~~Ar~~~~-~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~ 208 (286)
++|..||+|.+|.+....... .|. +|+.+|++++.++.....+. ... +....++...|. ..+.+.|+|++
T Consensus 1 mkI~VIGaG~~G~~la~~l~~--~g~~~~V~l~D~~~~~~~~~~~~l~~~~~-~~~~~~i~~~d~----~~~~~aDvVii 73 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLM--KGFAREMVLIDVDKKRAEGDALDLIHGTP-FTRRANIYAGDY----ADLKGSDVVIV 73 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--HTCCSEEEEECSSHHHHHHHHHHHHHHGG-GSCCCEEEECCG----GGGTTCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHh--CCCCCeEEEEeCChHHHHHHHHHHHhhhh-hcCCcEEEeCCH----HHhCCCCEEEE
Confidence 479999999988765443321 445 89999999987776433222 221 112334443442 23567999998
Q ss_pred hhhccCC----h--------hHHHHHHHHHHhhccCCcEEEEe
Q 042119 209 AALVGMS----K--------EEKLTILGHIRKYMKDGGILLVR 239 (286)
Q Consensus 209 aalvg~~----~--------~~k~~vl~~l~~~l~pgg~lv~r 239 (286)
+.-.+.. . +-+.++++.+.+. .|++.+++-
T Consensus 74 av~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~~~~~ii~~ 115 (319)
T 1a5z_A 74 AAGVPQKPGETRLQLLGRNARVMKEIARNVSKY-APDSIVIVV 115 (319)
T ss_dssp CCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEEC
T ss_pred ccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEe
Confidence 7654221 1 1245677777777 588877664
No 419
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=96.37 E-value=0.014 Score=50.38 Aligned_cols=95 Identities=11% Similarity=0.114 Sum_probs=62.3
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchh----hcCCCcc
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVK----EQLGEYD 204 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~----~~l~~fD 204 (286)
...++|+.+|+|.+|........ ..|. |+.+|.|++.++.++ .| +.++.+|+.+.. ..+.++|
T Consensus 7 ~~~~~viI~G~G~~G~~la~~L~--~~g~-v~vid~~~~~~~~~~-----~~-----~~~i~gd~~~~~~l~~a~i~~ad 73 (234)
T 2aef_A 7 AKSRHVVICGWSESTLECLRELR--GSEV-FVLAEDENVRKKVLR-----SG-----ANFVHGDPTRVSDLEKANVRGAR 73 (234)
T ss_dssp ---CEEEEESCCHHHHHHHHHST--TSEE-EEEESCGGGHHHHHH-----TT-----CEEEESCTTCHHHHHHTTCTTCS
T ss_pred CCCCEEEEECCChHHHHHHHHHH--hCCe-EEEEECCHHHHHHHh-----cC-----CeEEEcCCCCHHHHHhcCcchhc
Confidence 34579999999976654333222 2467 999999999876543 33 688999987532 1356799
Q ss_pred eeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 205 CIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 205 ~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
.|+.+.- + ......+....+.+.|+..+++|.
T Consensus 74 ~vi~~~~---~-d~~n~~~~~~a~~~~~~~~iia~~ 105 (234)
T 2aef_A 74 AVIVDLE---S-DSETIHCILGIRKIDESVRIIAEA 105 (234)
T ss_dssp EEEECCS---C-HHHHHHHHHHHHHHCSSSEEEEEC
T ss_pred EEEEcCC---C-cHHHHHHHHHHHHHCCCCeEEEEE
Confidence 9886532 1 233345556677789988888874
No 420
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=96.36 E-value=0.03 Score=51.77 Aligned_cols=108 Identities=19% Similarity=0.166 Sum_probs=65.8
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHH-HHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceee
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAAND-VARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIF 207 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~-~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~ 207 (286)
+++.+|..||+|.+|.+............+++.+|++++.++ .+..+-.....+..++++..+|. .++.+.|+|+
T Consensus 3 ~~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~----~a~~~aDvVv 78 (326)
T 3pqe_A 3 KHVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGTY----EDCKDADIVC 78 (326)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEECG----GGGTTCSEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCcH----HHhCCCCEEE
Confidence 457899999999988876654332122248999999988655 35555554442224567666653 2456789999
Q ss_pred hhhhc----cCChhH----HHHHHHHHHhhc---cCCcEEEEee
Q 042119 208 LAALV----GMSKEE----KLTILGHIRKYM---KDGGILLVRS 240 (286)
Q Consensus 208 ~aalv----g~~~~~----k~~vl~~l~~~l---~pgg~lv~r~ 240 (286)
+++-+ ||+..+ -..++..+.+.+ .|++.+++-+
T Consensus 79 i~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvt 122 (326)
T 3pqe_A 79 ICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVAT 122 (326)
T ss_dssp ECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred EecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcC
Confidence 87643 343222 113334333332 6888887754
No 421
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=96.35 E-value=0.0097 Score=55.53 Aligned_cols=99 Identities=10% Similarity=0.143 Sum_probs=64.3
Q ss_pred CCCEEEEeccCCChhhH-HHHHhhcCCCcEEEEEeCChHHHHHHHHHHHh---cCC--CCCCeEEEEccccchhhcCCCc
Q 042119 130 QPKKVAFVGSGPMPLTS-IIMAKHHLTSTHFDNFDIDEAANDVARSIVAS---DAE--FEGRMKFLTRDIMEVKEQLGEY 203 (286)
Q Consensus 130 ~~~~VL~IG~G~lp~ta-i~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~---~g~--l~~~i~f~~~D~~~~~~~l~~f 203 (286)
..++|.+||+|.+|.+. ..|++ .|.+|+.+|++++.++..++.-.. ++. +..++++ +.|..+ ...+.
T Consensus 28 ~~mkI~VIGaG~mG~alA~~La~---~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~-t~d~~e---a~~~a 100 (356)
T 3k96_A 28 FKHPIAILGAGSWGTALALVLAR---KGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKA-YCDLKA---SLEGV 100 (356)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHT---TTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEE-ESCHHH---HHTTC
T ss_pred cCCeEEEECccHHHHHHHHHHHH---CCCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEE-ECCHHH---HHhcC
Confidence 35799999999988653 33444 678999999999887665543100 110 1123443 234322 33578
Q ss_pred ceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEe
Q 042119 204 DCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVR 239 (286)
Q Consensus 204 D~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r 239 (286)
|+|+++. +.....++++.+.+.++|+.+++.-
T Consensus 101 DvVilaV----p~~~~~~vl~~i~~~l~~~~ivvs~ 132 (356)
T 3k96_A 101 TDILIVV----PSFAFHEVITRMKPLIDAKTRIAWG 132 (356)
T ss_dssp CEEEECC----CHHHHHHHHHHHGGGCCTTCEEEEC
T ss_pred CEEEECC----CHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 9999763 2356778999999999988876543
No 422
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=96.34 E-value=0.024 Score=52.10 Aligned_cols=102 Identities=19% Similarity=0.193 Sum_probs=66.2
Q ss_pred CCCEEEEeccCCChhhHHHHHhhcCCCc-EEEEEeCChHHHHHHHHHHHh----cCCCCCCeEEEEccccchhhcCCCcc
Q 042119 130 QPKKVAFVGSGPMPLTSIIMAKHHLTST-HFDNFDIDEAANDVARSIVAS----DAEFEGRMKFLTRDIMEVKEQLGEYD 204 (286)
Q Consensus 130 ~~~~VL~IG~G~lp~tai~lA~~~~~g~-~V~~iDid~~ai~~Ar~~~~~----~g~l~~~i~f~~~D~~~~~~~l~~fD 204 (286)
+..+|..||+|.+|.+...+... .|. .|+.+|++++.++.....+.. .+ ...++++. .|. .++.+.|
T Consensus 3 ~~~kI~VIGaG~vG~~ia~~la~--~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~-~~~~i~~t-~d~----~al~~aD 74 (322)
T 1t2d_A 3 PKAKIVLVGSGMIGGVMATLIVQ--KNLGDVVLFDIVKNMPHGKALDTSHTNVMAY-SNCKVSGS-NTY----DDLAGAD 74 (322)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH--TTCCEEEEECSSSSHHHHHHHHHHTHHHHHT-CCCCEEEE-CCG----GGGTTCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHh--CCCCeEEEEeCCHHHHHHHHHHHHhhhhhcC-CCcEEEEC-CCH----HHhCCCC
Confidence 45699999999999875554442 444 799999999887754333332 23 22344432 443 3456889
Q ss_pred eeehhhhc----cCC-------------hhHHHHHHHHHHhhccCCcEEEEee
Q 042119 205 CIFLAALV----GMS-------------KEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 205 ~V~~aalv----g~~-------------~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
+|++++-+ |+. .+-+.++.+.+.+.. |++.+++-+
T Consensus 75 ~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~t 126 (322)
T 1t2d_A 75 VVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNC-PNAFIIVVT 126 (322)
T ss_dssp EEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECS
T ss_pred EEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEec
Confidence 99988633 222 134777888888885 999887643
No 423
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=96.34 E-value=0.014 Score=55.06 Aligned_cols=109 Identities=13% Similarity=-0.001 Sum_probs=63.3
Q ss_pred CCEEEEeccCCChhhHHHHHh-------h------cCCCcEEEEEeCChHH-HHHHHHHHHhcCC----------CCCCe
Q 042119 131 PKKVAFVGSGPMPLTSIIMAK-------H------HLTSTHFDNFDIDEAA-NDVARSIVASDAE----------FEGRM 186 (286)
Q Consensus 131 ~~~VL~IG~G~lp~tai~lA~-------~------~~~g~~V~~iDid~~a-i~~Ar~~~~~~g~----------l~~~i 186 (286)
+.+|+|+|||.+|.|...+.. + ..|..+|..-|+-..- +.+-+.+ ..... ...+-
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L-~~~~~~~~~~~~~~~~~~~~ 131 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLL-PPLVSNTCMEECLAADGNRS 131 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHS-CCBCCCC--CCC---CCCBC
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhh-hhhhhhcchhhhccccCCCc
Confidence 589999999998877665221 0 0256777777765533 2222221 11000 00112
Q ss_pred EEEEccccc---hhhcCCCcceeehhhhccCCh-------------------------------------hHHHHHHHHH
Q 042119 187 KFLTRDIME---VKEQLGEYDCIFLAALVGMSK-------------------------------------EEKLTILGHI 226 (286)
Q Consensus 187 ~f~~~D~~~---~~~~l~~fD~V~~aalvg~~~-------------------------------------~~k~~vl~~l 226 (286)
.|..|.... ...+-+.||+|+-+..++|-. .+-..+|+..
T Consensus 132 ~f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~r 211 (374)
T 3b5i_A 132 YFVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRAR 211 (374)
T ss_dssp SEEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 355555443 223346799998665444511 1334578999
Q ss_pred HhhccCCcEEEEee
Q 042119 227 RKYMKDGGILLVRS 240 (286)
Q Consensus 227 ~~~l~pgg~lv~r~ 240 (286)
++.|+|||++++..
T Consensus 212 a~eL~pGG~mvl~~ 225 (374)
T 3b5i_A 212 AAEVKRGGAMFLVC 225 (374)
T ss_dssp HHHEEEEEEEEEEE
T ss_pred HHHhCCCCEEEEEE
Confidence 99999999998864
No 424
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=96.31 E-value=0.011 Score=54.09 Aligned_cols=101 Identities=11% Similarity=0.225 Sum_probs=62.5
Q ss_pred CCCCEEEEeccCCChhh-HHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceee
Q 042119 129 VQPKKVAFVGSGPMPLT-SIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIF 207 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~t-ai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~ 207 (286)
.+..+|..||+|.+|.+ +..++.. ....+|+-+|+++++...+.++..... .+++. ++|. .++.+.|+|+
T Consensus 12 ~~~~kV~ViGaG~vG~~~a~~l~~~-g~~~ev~L~Di~~~~~g~a~dl~~~~~---~~i~~-t~d~----~~l~~aD~Vi 82 (303)
T 2i6t_A 12 KTVNKITVVGGGELGIACTLAISAK-GIADRLVLLDLSEGTKGATMDLEIFNL---PNVEI-SKDL----SASAHSKVVI 82 (303)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHH-TCCSEEEEECCC-----CHHHHHHHTC---TTEEE-ESCG----GGGTTCSEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhc-CCCCEEEEEcCCcchHHHHHHHhhhcC---CCeEE-eCCH----HHHCCCCEEE
Confidence 45589999999976643 3334441 233489999999987777777775322 47766 3553 4567899999
Q ss_pred hhhhcc---C--------ChhHHHHHHHHHHhhccCCcEEEEe
Q 042119 208 LAALVG---M--------SKEEKLTILGHIRKYMKDGGILLVR 239 (286)
Q Consensus 208 ~aalvg---~--------~~~~k~~vl~~l~~~l~pgg~lv~r 239 (286)
+++-++ | +.+-+.++++.+.++. |++.+++-
T Consensus 83 ~aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~ 124 (303)
T 2i6t_A 83 FTVNSLGSSQSYLDVVQSNVDMFRALVPALGHYS-QHSVLLVA 124 (303)
T ss_dssp ECCCC----CCHHHHHHHHHHHHHHHHHHHHHHT-TTCEEEEC
T ss_pred EcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEc
Confidence 886331 1 1234677888888875 99987664
No 425
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=96.31 E-value=0.0071 Score=61.60 Aligned_cols=101 Identities=18% Similarity=0.201 Sum_probs=68.4
Q ss_pred CCCCEEEEeccCCChhh-HHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHh-------cCCCC--------CCeEEEEcc
Q 042119 129 VQPKKVAFVGSGPMPLT-SIIMAKHHLTSTHFDNFDIDEAANDVARSIVAS-------DAEFE--------GRMKFLTRD 192 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~t-ai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~-------~g~l~--------~~i~f~~~D 192 (286)
.+-++|.+||+|.+|.. +..+++ .|.+|+.+|++++.++.+++.++. .|.+. .++++. .|
T Consensus 312 ~~i~kV~VIGaG~MG~~iA~~la~---aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~-~d 387 (715)
T 1wdk_A 312 KDVKQAAVLGAGIMGGGIAYQSAS---KGTPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPT-LS 387 (715)
T ss_dssp CCCSSEEEECCHHHHHHHHHHHHH---TTCCEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEEE-SS
T ss_pred ccCCEEEEECCChhhHHHHHHHHh---CCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCeEEE-CC
Confidence 34568999999998865 334454 688999999999999887554321 22110 124432 33
Q ss_pred ccchhhcCCCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEe
Q 042119 193 IMEVKEQLGEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVR 239 (286)
Q Consensus 193 ~~~~~~~l~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r 239 (286)
. ..+.+.|+|+.+.. .+.+-|..++.++.+.++|+.+|+..
T Consensus 388 ~----~~~~~aDlVIeaV~--e~~~vk~~v~~~l~~~~~~~~Ilasn 428 (715)
T 1wdk_A 388 Y----GDFGNVDLVVEAVV--ENPKVKQAVLAEVENHVREDAILASN 428 (715)
T ss_dssp S----TTGGGCSEEEECCC--SCHHHHHHHHHHHHTTSCTTCEEEEC
T ss_pred H----HHHCCCCEEEEcCC--CCHHHHHHHHHHHHhhCCCCeEEEeC
Confidence 2 23457899998743 23456889999999999999877643
No 426
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=96.28 E-value=0.0093 Score=54.52 Aligned_cols=92 Identities=10% Similarity=0.134 Sum_probs=58.7
Q ss_pred CCEEEEeccCCChhhHHH-HHhhcCCC-cEEEEEeCChHHHHHHH---HHHHhcCCCCCCeEEEEc-cccchhhcCCCcc
Q 042119 131 PKKVAFVGSGPMPLTSII-MAKHHLTS-THFDNFDIDEAANDVAR---SIVASDAEFEGRMKFLTR-DIMEVKEQLGEYD 204 (286)
Q Consensus 131 ~~~VL~IG~G~lp~tai~-lA~~~~~g-~~V~~iDid~~ai~~Ar---~~~~~~g~l~~~i~f~~~-D~~~~~~~l~~fD 204 (286)
.++|.+||+|.+|..... |++ .| .+|+++|++++..+.++ +.+...| + .. +..+. ..+.|
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~---~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g-----~---~~~s~~e~---~~~aD 89 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGG---RNAARLAAYDLRFNDPAASGALRARAAELG-----V---EPLDDVAG---IACAD 89 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT---TTCSEEEEECGGGGCTTTHHHHHHHHHHTT-----C---EEESSGGG---GGGCS
T ss_pred CCeEEEECccHHHHHHHHHHHH---cCCCeEEEEeCCCccccchHHHHHHHHHCC-----C---CCCCHHHH---HhcCC
Confidence 468999999988865433 333 67 89999999984222222 2223345 2 33 43332 34679
Q ss_pred eeehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 205 CIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 205 ~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
+||++.-- ..-.+.++.+.+.++||.+++-.+
T Consensus 90 vVi~avp~----~~~~~~~~~i~~~l~~~~ivv~~s 121 (317)
T 4ezb_A 90 VVLSLVVG----AATKAVAASAAPHLSDEAVFIDLN 121 (317)
T ss_dssp EEEECCCG----GGHHHHHHHHGGGCCTTCEEEECC
T ss_pred EEEEecCC----HHHHHHHHHHHhhcCCCCEEEECC
Confidence 99976432 333456789999999998887654
No 427
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=96.27 E-value=0.0063 Score=59.31 Aligned_cols=99 Identities=13% Similarity=0.128 Sum_probs=66.2
Q ss_pred CCEEEEeccCCChhhH-HHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeehh
Q 042119 131 PKKVAFVGSGPMPLTS-IIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFLA 209 (286)
Q Consensus 131 ~~~VL~IG~G~lp~ta-i~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~a 209 (286)
.++|.+||.|.+|... ..|++ .|.+|+++|++++.++...+. +..+.++.. +.+..++...+...|+||++
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~---~G~~V~v~dr~~~~~~~l~~~----g~~g~~i~~-~~s~~e~v~~l~~aDvVil~ 75 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMND---HGFVVCAFNRTVSKVDDFLAN----EAKGTKVVG-AQSLKEMVSKLKKPRRIILL 75 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHH---TTCCEEEECSSTHHHHHHHHT----TTTTSSCEE-CSSHHHHHHTBCSSCEEEEC
T ss_pred CCEEEEEChhHHHHHHHHHHHH---CCCEEEEEeCCHHHHHHHHhc----ccCCCceec-cCCHHHHHhhccCCCEEEEe
Confidence 3689999999988763 33444 688999999999887654442 211123322 34555555555578999976
Q ss_pred hhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 210 ALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 210 alvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
.-.+ +.-..+++.+.+.|+||.+|+--+
T Consensus 76 Vp~~---~~v~~vl~~l~~~L~~g~iIId~s 103 (484)
T 4gwg_A 76 VKAG---QAVDDFIEKLVPLLDTGDIIIDGG 103 (484)
T ss_dssp SCSS---HHHHHHHHHHGGGCCTTCEEEECS
T ss_pred cCCh---HHHHHHHHHHHHhcCCCCEEEEcC
Confidence 4321 234568899999999998777643
No 428
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=96.27 E-value=0.0011 Score=62.00 Aligned_cols=75 Identities=7% Similarity=-0.009 Sum_probs=52.3
Q ss_pred CCCCEEEEe--ccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcC---CCc
Q 042119 129 VQPKKVAFV--GSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQL---GEY 203 (286)
Q Consensus 129 ~~~~~VL~I--G~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l---~~f 203 (286)
.++++||.+ |+|++|+.++.+|+. .|++|+++|.+++..+++++ +| ...-+.....|..+..... .++
T Consensus 169 ~~g~~vlV~gag~G~vG~~a~q~a~~--~Ga~Vi~~~~~~~~~~~~~~----lG-a~~~~~~~~~~~~~~v~~~t~~~g~ 241 (379)
T 3iup_A 169 LEGHSALVHTAAASNLGQMLNQICLK--DGIKLVNIVRKQEQADLLKA----QG-AVHVCNAASPTFMQDLTEALVSTGA 241 (379)
T ss_dssp HTTCSCEEESSTTSHHHHHHHHHHHH--HTCCEEEEESSHHHHHHHHH----TT-CSCEEETTSTTHHHHHHHHHHHHCC
T ss_pred cCCCEEEEECCCCCHHHHHHHHHHHH--CCCEEEEEECCHHHHHHHHh----CC-CcEEEeCCChHHHHHHHHHhcCCCc
Confidence 678999999 899999999999994 68999999999999888875 67 2222222222221111111 269
Q ss_pred ceeehhh
Q 042119 204 DCIFLAA 210 (286)
Q Consensus 204 D~V~~aa 210 (286)
|+||.+.
T Consensus 242 d~v~d~~ 248 (379)
T 3iup_A 242 TIAFDAT 248 (379)
T ss_dssp CEEEESC
T ss_pred eEEEECC
Confidence 9999654
No 429
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=96.23 E-value=0.0071 Score=47.26 Aligned_cols=95 Identities=15% Similarity=0.139 Sum_probs=59.2
Q ss_pred CCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchh--hc--CCCccee
Q 042119 131 PKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVK--EQ--LGEYDCI 206 (286)
Q Consensus 131 ~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~--~~--l~~fD~V 206 (286)
.++|+.+|+|.+|......... .|.+|+.+|.+++..+.++ ..| ..++.+|..+.. .. ..++|+|
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~--~g~~v~~~d~~~~~~~~~~----~~~-----~~~~~~d~~~~~~l~~~~~~~~d~v 74 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHR--MGHEVLAVDINEEKVNAYA----SYA-----THAVIANATEENELLSLGIRNFEYV 74 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH--TTCCCEEEESCHHHHHTTT----TTC-----SEEEECCTTCHHHHHTTTGGGCSEE
T ss_pred CCcEEEECCCHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHH----HhC-----CEEEEeCCCCHHHHHhcCCCCCCEE
Confidence 4689999999888765554442 6789999999987654332 123 356778875421 11 3468998
Q ss_pred ehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 207 FLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 207 ~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
+.+.- .+. .....+....+.+.++ .++.+.
T Consensus 75 i~~~~--~~~-~~~~~~~~~~~~~~~~-~ii~~~ 104 (144)
T 2hmt_A 75 IVAIG--ANI-QASTLTTLLLKELDIP-NIWVKA 104 (144)
T ss_dssp EECCC--SCH-HHHHHHHHHHHHTTCS-EEEEEC
T ss_pred EECCC--Cch-HHHHHHHHHHHHcCCC-eEEEEe
Confidence 86542 221 2223445556667776 666654
No 430
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=96.23 E-value=0.02 Score=54.91 Aligned_cols=100 Identities=22% Similarity=0.293 Sum_probs=65.6
Q ss_pred CCCCEEEEeccCCChhh-HHHHHhhcCCCcEEEEEeCChHHHHHHHH------------HHHhcCCCCCCeEEEEccccc
Q 042119 129 VQPKKVAFVGSGPMPLT-SIIMAKHHLTSTHFDNFDIDEAANDVARS------------IVASDAEFEGRMKFLTRDIME 195 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~t-ai~lA~~~~~g~~V~~iDid~~ai~~Ar~------------~~~~~g~l~~~i~f~~~D~~~ 195 (286)
..+++.-.||.|-+|+. +..||+ .|.+|+++|+|++.++.-++ ++++.- ...+++|. .|
T Consensus 9 ~~~~~~~ViGlGyvGlp~A~~La~---~G~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~-~~g~l~~t-td--- 80 (431)
T 3ojo_A 9 HHGSKLTVVGLGYIGLPTSIMFAK---HGVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVL-SSGKLKVS-TT--- 80 (431)
T ss_dssp ---CEEEEECCSTTHHHHHHHHHH---TTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHH-HTTCEEEE-SS---
T ss_pred ccCCccEEEeeCHHHHHHHHHHHH---CCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhc-ccCceEEe-Cc---
Confidence 56899999999999986 455666 78999999999999887654 222110 01345553 23
Q ss_pred hhhcCCCcceeehhhhccC--------ChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 196 VKEQLGEYDCIFLAALVGM--------SKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 196 ~~~~l~~fD~V~~aalvg~--------~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
..+.|+||++---.. +...=....+.+.+.|+||.+++..+
T Consensus 81 ----~~~aDvvii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~S 129 (431)
T 3ojo_A 81 ----PEASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVES 129 (431)
T ss_dssp ----CCCCSEEEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECS
T ss_pred ----hhhCCEEEEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEec
Confidence 236899987642211 11123456788999999999888876
No 431
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=96.19 E-value=0.027 Score=42.31 Aligned_cols=70 Identities=23% Similarity=0.207 Sum_probs=49.4
Q ss_pred CCCEEEEeccCCChhhHHHHHhhcCCC-cEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccch---hhcCCCcce
Q 042119 130 QPKKVAFVGSGPMPLTSIIMAKHHLTS-THFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEV---KEQLGEYDC 205 (286)
Q Consensus 130 ~~~~VL~IG~G~lp~tai~lA~~~~~g-~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~---~~~l~~fD~ 205 (286)
..++|+.+|+|.+|......... .| .+|+.+|++++..+... .. .+.+...|..+. ...+.++|+
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~--~g~~~v~~~~r~~~~~~~~~----~~-----~~~~~~~d~~~~~~~~~~~~~~d~ 72 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKT--SSNYSVTVADHDLAALAVLN----RM-----GVATKQVDAKDEAGLAKALGGFDA 72 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHH--CSSEEEEEEESCHHHHHHHH----TT-----TCEEEECCTTCHHHHHHHTTTCSE
T ss_pred CcCeEEEECCCHHHHHHHHHHHh--CCCceEEEEeCCHHHHHHHH----hC-----CCcEEEecCCCHHHHHHHHcCCCE
Confidence 35799999999887765544432 56 89999999998766554 22 467777887642 233468999
Q ss_pred eehhh
Q 042119 206 IFLAA 210 (286)
Q Consensus 206 V~~aa 210 (286)
|+.++
T Consensus 73 vi~~~ 77 (118)
T 3ic5_A 73 VISAA 77 (118)
T ss_dssp EEECS
T ss_pred EEECC
Confidence 99765
No 432
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=96.18 E-value=0.018 Score=52.43 Aligned_cols=96 Identities=20% Similarity=0.242 Sum_probs=60.7
Q ss_pred CCEEEEeccCCChhhHH-HHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCC-C-CC------CeEEEEccccchhhcCC
Q 042119 131 PKKVAFVGSGPMPLTSI-IMAKHHLTSTHFDNFDIDEAANDVARSIVASDAE-F-EG------RMKFLTRDIMEVKEQLG 201 (286)
Q Consensus 131 ~~~VL~IG~G~lp~tai-~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~-l-~~------~i~f~~~D~~~~~~~l~ 201 (286)
.++|+.||+|.+|.... .|++ .|.+|+.+|.+++.++..++. .|. + +. ++.....|..+ ...
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~---~g~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 74 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLAL---KGQSVLAWDIDAQRIKEIQDR---GAIIAEGPGLAGTAHPDLLTSDIGL---AVK 74 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH---TTCEEEEECSCHHHHHHHHHH---TSEEEESSSCCEEECCSEEESCHHH---HHT
T ss_pred cCeEEEECCCHHHHHHHHHHHh---CCCEEEEEeCCHHHHHHHHhc---CCeEEeccccccccccceecCCHHH---HHh
Confidence 36999999998875433 3444 678999999999887655443 120 0 00 01012223222 235
Q ss_pred CcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEe
Q 042119 202 EYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVR 239 (286)
Q Consensus 202 ~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r 239 (286)
.+|+|+++.-. ..-.++++.+.+.+++|..++.-
T Consensus 75 ~~D~vi~~v~~----~~~~~~~~~l~~~l~~~~~vv~~ 108 (359)
T 1bg6_A 75 DADVILIVVPA----IHHASIAANIASYISEGQLIILN 108 (359)
T ss_dssp TCSEEEECSCG----GGHHHHHHHHGGGCCTTCEEEES
T ss_pred cCCEEEEeCCc----hHHHHHHHHHHHhCCCCCEEEEc
Confidence 79999987432 23357889999999999877665
No 433
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=96.18 E-value=0.023 Score=51.78 Aligned_cols=102 Identities=16% Similarity=0.189 Sum_probs=64.0
Q ss_pred CCCEEEEeccCCChhhHHHHHhhcCCCc-EEEEEeCChHHHHHH-HHHHHh---cCCCCCCeEEEEccccchhhcCCCcc
Q 042119 130 QPKKVAFVGSGPMPLTSIIMAKHHLTST-HFDNFDIDEAANDVA-RSIVAS---DAEFEGRMKFLTRDIMEVKEQLGEYD 204 (286)
Q Consensus 130 ~~~~VL~IG~G~lp~tai~lA~~~~~g~-~V~~iDid~~ai~~A-r~~~~~---~g~l~~~i~f~~~D~~~~~~~l~~fD 204 (286)
.+.+|..||+|.+|.+....... .|. +|+.+|++++.++.. ..+... .+ ...+++.. .|. ..+.+.|
T Consensus 3 ~~~kI~VIGaG~~G~~ia~~la~--~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~-~~~~i~~t-~d~----~a~~~aD 74 (317)
T 2ewd_A 3 ERRKIAVIGSGQIGGNIAYIVGK--DNLADVVLFDIAEGIPQGKALDITHSMVMFG-STSKVIGT-DDY----ADISGSD 74 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH--HTCCEEEEECSSSSHHHHHHHHHHHHHHHHT-CCCCEEEE-SCG----GGGTTCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHh--CCCceEEEEeCCchHHHHHHHHHHhhhhhcC-CCcEEEEC-CCH----HHhCCCC
Confidence 45799999999988764443331 455 899999999877752 222221 22 12345432 343 3456789
Q ss_pred eeehhhhc----cC--------ChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 205 CIFLAALV----GM--------SKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 205 ~V~~aalv----g~--------~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
+|+++.-+ |+ +.+.+.++++.+.++ .|++.+++-+
T Consensus 75 iVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~-~~~~iii~~s 121 (317)
T 2ewd_A 75 VVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKY-CPNAFVICIT 121 (317)
T ss_dssp EEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHH-CTTSEEEECC
T ss_pred EEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHH-CCCcEEEEeC
Confidence 99988632 11 124477888888887 5788776643
No 434
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=96.14 E-value=0.03 Score=51.40 Aligned_cols=99 Identities=20% Similarity=0.261 Sum_probs=65.2
Q ss_pred CCCCCEEEEecc----CCChhhHHHHHhhcCC-CcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCC
Q 042119 128 VVQPKKVAFVGS----GPMPLTSIIMAKHHLT-STHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGE 202 (286)
Q Consensus 128 ~~~~~~VL~IG~----G~lp~tai~lA~~~~~-g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~ 202 (286)
+..+++||++|+ |.-|-| ..+.+. .+ |+.|+++|+.|-.. . .. .+++||..++.. -+.
T Consensus 107 vp~gmrVLDLGA~s~kg~APGS-~VLr~~-~p~g~~VVavDL~~~~s---------d----a~-~~IqGD~~~~~~-~~k 169 (344)
T 3r24_A 107 VPYNMRVIHFGAGSDKGVAPGT-AVLRQW-LPTGTLLVDSDLNDFVS---------D----AD-STLIGDCATVHT-ANK 169 (344)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH-HHHHHH-SCTTCEEEEEESSCCBC---------S----SS-EEEESCGGGEEE-SSC
T ss_pred ecCCCEEEeCCCCCCCCCCCcH-HHHHHh-CCCCcEEEEeeCccccc---------C----CC-eEEEcccccccc-CCC
Confidence 478899999996 334555 455553 56 47999999986321 1 12 569999765443 257
Q ss_pred cceeehhh---hccCChh-------HHHHHHHHHHhhccCCcEEEEeecCc
Q 042119 203 YDCIFLAA---LVGMSKE-------EKLTILGHIRKYMKDGGILLVRSAKG 243 (286)
Q Consensus 203 fD~V~~aa---lvg~~~~-------~k~~vl~~l~~~l~pgg~lv~r~~~g 243 (286)
||+|+-+. +-|.... -=+.+++-..++|+|||.+++.-..|
T Consensus 170 ~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQG 220 (344)
T 3r24_A 170 WDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEH 220 (344)
T ss_dssp EEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSS
T ss_pred CCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecC
Confidence 99998543 2233111 13445666777999999999987554
No 435
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=96.12 E-value=0.0098 Score=52.69 Aligned_cols=48 Identities=17% Similarity=0.088 Sum_probs=41.1
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcC
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDA 180 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g 180 (286)
.++..|||..||. |.|++..++ .|.+++|+|+++.+++.|++.++..+
T Consensus 211 ~~~~~vlD~f~Gs-Gtt~~~a~~---~gr~~ig~e~~~~~~~~~~~r~~~~~ 258 (260)
T 1g60_A 211 NPNDLVLDCFMGS-GTTAIVAKK---LGRNFIGCDMNAEYVNQANFVLNQLE 258 (260)
T ss_dssp CTTCEEEESSCTT-CHHHHHHHH---TTCEEEEEESCHHHHHHHHHHHHC--
T ss_pred CCCCEEEECCCCC-CHHHHHHHH---cCCeEEEEeCCHHHHHHHHHHHHhcc
Confidence 6789999999995 778777666 78999999999999999999988765
No 436
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=96.10 E-value=0.03 Score=53.52 Aligned_cols=75 Identities=12% Similarity=0.057 Sum_probs=50.8
Q ss_pred CCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCC-cceeeh
Q 042119 130 QPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGE-YDCIFL 208 (286)
Q Consensus 130 ~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~-fD~V~~ 208 (286)
.+++|++||-|..|+++..+..+ .|.+|++.|..+.......+.+++.| +++..+...+ ..+.+ +|+|+.
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~--~G~~V~~~D~~~~~~~~~~~~L~~~g-----i~~~~g~~~~--~~~~~~~d~vv~ 78 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAK--LGAIVTVNDGKPFDENPTAQSLLEEG-----IKVVCGSHPL--ELLDEDFCYMIK 78 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHH--TTCEEEEEESSCGGGCHHHHHHHHTT-----CEEEESCCCG--GGGGSCEEEEEE
T ss_pred CCCEEEEEeeCHHHHHHHHHHHh--CCCEEEEEeCCcccCChHHHHHHhCC-----CEEEECCChH--HhhcCCCCEEEE
Confidence 57899999999999987766653 89999999996532111223455566 5677665422 12234 999998
Q ss_pred hhhcc
Q 042119 209 AALVG 213 (286)
Q Consensus 209 aalvg 213 (286)
+..+.
T Consensus 79 spgi~ 83 (451)
T 3lk7_A 79 NPGIP 83 (451)
T ss_dssp CTTSC
T ss_pred CCcCC
Confidence 76663
No 437
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=96.07 E-value=0.017 Score=51.96 Aligned_cols=136 Identities=11% Similarity=0.096 Sum_probs=76.7
Q ss_pred hcCCCCCCEEEEeccCCChhhHHHHHhhcCCC-cEEEEEeCChHHHHHHHHHHHhcCCCC---CCe---EEEEc-cccch
Q 042119 125 ENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTS-THFDNFDIDEAANDVARSIVASDAEFE---GRM---KFLTR-DIMEV 196 (286)
Q Consensus 125 ~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g-~~V~~iDid~~ai~~Ar~~~~~~g~l~---~~i---~f~~~-D~~~~ 196 (286)
+..++++.+|+|+||+|+|-|-. .++ ..+ ..|.|.++..+- ...+ .. ..+ +|..+ |+.++
T Consensus 68 K~likpg~~VVDLGaAPGGWSQv-Aa~--~~~vg~V~G~vig~D~--------~~~P-~~~~~~Gv~~i~~~~G~Df~~~ 135 (269)
T 2px2_A 68 RRFVQPIGKVVDLGCGRGGWSYY-AAT--MKNVQEVRGYTKGGPG--------HEEP-MLMQSYGWNIVTMKSGVDVFYK 135 (269)
T ss_dssp TTSCCCCEEEEEETCTTSHHHHH-HTT--STTEEEEEEECCCSTT--------SCCC-CCCCSTTGGGEEEECSCCGGGS
T ss_pred cCCCCCCCEEEEcCCCCCHHHHH-Hhh--hcCCCCceeEEEcccc--------ccCC-CcccCCCceEEEeeccCCccCC
Confidence 44568999999999999998744 333 222 233444443320 0011 11 233 55557 98763
Q ss_pred hhcCCCcceeehhhh--ccCChhHH---HHHHHHHHhhccCCc-EEEEeecCccee-e---------------ecccCCc
Q 042119 197 KEQLGEYDCIFLAAL--VGMSKEEK---LTILGHIRKYMKDGG-ILLVRSAKGARA-F---------------LYPVVVE 254 (286)
Q Consensus 197 ~~~l~~fD~V~~aal--vg~~~~~k---~~vl~~l~~~l~pgg-~lv~r~~~g~r~-~---------------lyp~v~~ 254 (286)
. -..+|+|+.+.. -|...-+- ..+|+-..+.|+||| -+++.--+|... | .-|+...
T Consensus 136 ~--~~~~DvVLSDMAPnSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFqg~~~~~~~~l~~lk~~F~~vkvk~paSR 213 (269)
T 2px2_A 136 P--SEISDTLLCDIGESSPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILCPYMPKVIEKLESLQRRFGGGLVRVPLSR 213 (269)
T ss_dssp C--CCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCTTSHHHHHHHHHHHHHHCCEEECCTTSC
T ss_pred C--CCCCCEEEeCCCCCCCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECCCCchHHHHHHHHHHHHcCCEEEECCCCC
Confidence 2 236999996542 12211121 135666778999999 898875444111 1 1222111
Q ss_pred ccccCcEEEEEecCcccceeee
Q 042119 255 HDLLDFEVLSAVHPNDDVINSV 276 (286)
Q Consensus 255 ~~l~gf~~~~~~~P~~~vinsv 276 (286)
+ ...|++.+....+.++|+|
T Consensus 214 ~--~S~E~YlVa~~~~n~~~~v 233 (269)
T 2px2_A 214 N--SNHEMYWVSGASGNIVHAV 233 (269)
T ss_dssp T--TCCCEEEETTCCSCHHHHH
T ss_pred C--CCccEEEEecccCcHHHHH
Confidence 1 2467777777777777776
No 438
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=96.05 E-value=0.012 Score=52.75 Aligned_cols=93 Identities=13% Similarity=0.175 Sum_probs=61.4
Q ss_pred CCEEEEeccCCChhhHHH-HHhhcCCCc---EEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCccee
Q 042119 131 PKKVAFVGSGPMPLTSII-MAKHHLTST---HFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCI 206 (286)
Q Consensus 131 ~~~VL~IG~G~lp~tai~-lA~~~~~g~---~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V 206 (286)
.++|.+||+|.+|.+-.. +++ .|. +|+.+|++++..+..++ ..| +++ +.|..+ ...+.|+|
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~---~g~~~~~V~v~dr~~~~~~~l~~---~~g-----i~~-~~~~~~---~~~~aDvV 67 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIA---NGYDPNRICVTNRSLDKLDFFKE---KCG-----VHT-TQDNRQ---GALNADVV 67 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHH---TTCCGGGEEEECSSSHHHHHHHH---TTC-----CEE-ESCHHH---HHSSCSEE
T ss_pred CCEEEEEcccHHHHHHHHHHHH---CCCCCCeEEEEeCCHHHHHHHHH---HcC-----CEE-eCChHH---HHhcCCeE
Confidence 368999999988865333 333 344 89999999987665544 245 233 234322 33578999
Q ss_pred ehhhhccCChhHHHHHHHHHHhh-ccCCcEEEEeecCc
Q 042119 207 FLAALVGMSKEEKLTILGHIRKY-MKDGGILLVRSAKG 243 (286)
Q Consensus 207 ~~aalvg~~~~~k~~vl~~l~~~-l~pgg~lv~r~~~g 243 (286)
+++. +.....++++++.+. ++++.+++ ....|
T Consensus 68 ilav----~p~~~~~vl~~l~~~~l~~~~iii-S~~ag 100 (280)
T 3tri_A 68 VLAV----KPHQIKMVCEELKDILSETKILVI-SLAVG 100 (280)
T ss_dssp EECS----CGGGHHHHHHHHHHHHHTTTCEEE-ECCTT
T ss_pred EEEe----CHHHHHHHHHHHHhhccCCCeEEE-EecCC
Confidence 9875 236778899999998 87775554 33344
No 439
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=96.05 E-value=0.015 Score=51.51 Aligned_cols=88 Identities=16% Similarity=0.106 Sum_probs=57.9
Q ss_pred CEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeehhhh
Q 042119 132 KKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFLAAL 211 (286)
Q Consensus 132 ~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~aal 211 (286)
++|.+||+|.+|........ . |.+|+.+|++++..+..++. |. . .. +..+ ...++|+|+++.-
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~--~-g~~V~~~~~~~~~~~~~~~~----g~---~--~~--~~~~---~~~~~D~vi~~v~ 64 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLA--R-RFPTLVWNRTFEKALRHQEE----FG---S--EA--VPLE---RVAEARVIFTCLP 64 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHH--T-TSCEEEECSSTHHHHHHHHH----HC---C--EE--CCGG---GGGGCSEEEECCS
T ss_pred CeEEEEcccHHHHHHHHHHh--C-CCeEEEEeCCHHHHHHHHHC----CC---c--cc--CHHH---HHhCCCEEEEeCC
Confidence 47999999999876443333 4 78999999999887665442 52 1 11 1212 2346899997643
Q ss_pred ccCChhHHHHHHHHHHhhccCCcEEEEe
Q 042119 212 VGMSKEEKLTILGHIRKYMKDGGILLVR 239 (286)
Q Consensus 212 vg~~~~~k~~vl~~l~~~l~pgg~lv~r 239 (286)
- ...-..+++.+.+.+++|..++.-
T Consensus 65 ~---~~~~~~v~~~l~~~l~~~~~vv~~ 89 (289)
T 2cvz_A 65 T---TREVYEVAEALYPYLREGTYWVDA 89 (289)
T ss_dssp S---HHHHHHHHHHHTTTCCTTEEEEEC
T ss_pred C---hHHHHHHHHHHHhhCCCCCEEEEC
Confidence 1 122445778888889998877754
No 440
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=96.04 E-value=0.0067 Score=58.31 Aligned_cols=111 Identities=16% Similarity=0.134 Sum_probs=71.3
Q ss_pred ccchhhhhHHHHHHHHhcC--CCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCe
Q 042119 109 YGNYVKLSKLEYTILSENG--VVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRM 186 (286)
Q Consensus 109 ~~ny~~l~~~E~~~l~~~~--~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i 186 (286)
|+|...+.+--...+.+.. .-.+++|+.+|.|++|......++. .|++|+++|++|.....|. ..| .
T Consensus 196 fDn~yGt~~s~~~gi~rat~~~L~GktV~ViG~G~IGk~vA~~Lra--~Ga~Viv~D~dp~ra~~A~----~~G-~---- 264 (435)
T 3gvp_A 196 FDNLYCCRESILDGLKRTTDMMFGGKQVVVCGYGEVGKGCCAALKA--MGSIVYVTEIDPICALQAC----MDG-F---- 264 (435)
T ss_dssp HHTHHHHHHHHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSCHHHHHHHH----HTT-C----
T ss_pred hhhhhhhHHHHHHHHHHhhCceecCCEEEEEeeCHHHHHHHHHHHH--CCCEEEEEeCChhhhHHHH----HcC-C----
Confidence 3554444444444554442 3578999999999999998888884 6999999999997544433 345 1
Q ss_pred EEEEccccchhhcCCCcceeehhhhccCChhHHHHHH-HHHHhhccCCcEEEEeecCc
Q 042119 187 KFLTRDIMEVKEQLGEYDCIFLAALVGMSKEEKLTIL-GHIRKYMKDGGILLVRSAKG 243 (286)
Q Consensus 187 ~f~~~D~~~~~~~l~~fD~V~~aalvg~~~~~k~~vl-~~l~~~l~pgg~lv~r~~~g 243 (286)
+ ..+ +...+...|+|+.+.- .+ .++ .+..+.||||++|+-- ++|
T Consensus 265 ~--v~~---Leeal~~ADIVi~atg------t~-~lI~~e~l~~MK~gailINv-grg 309 (435)
T 3gvp_A 265 R--LVK---LNEVIRQVDIVITCTG------NK-NVVTREHLDRMKNSCIVCNM-GHS 309 (435)
T ss_dssp E--ECC---HHHHTTTCSEEEECSS------CS-CSBCHHHHHHSCTTEEEEEC-SST
T ss_pred E--ecc---HHHHHhcCCEEEECCC------Cc-ccCCHHHHHhcCCCcEEEEe-cCC
Confidence 2 223 3344567899988521 11 122 2566788999876654 444
No 441
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=96.04 E-value=0.0082 Score=55.87 Aligned_cols=91 Identities=12% Similarity=0.133 Sum_probs=60.5
Q ss_pred CCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhc-CCCcceeehh
Q 042119 131 PKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQ-LGEYDCIFLA 209 (286)
Q Consensus 131 ~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~-l~~fD~V~~a 209 (286)
.++|.+||+|.+|.+-....+ ..|.+|+++|.+++..+.+++ .| . . . +.|..+.... ..+.|+|+++
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~--~~G~~V~~~dr~~~~~~~a~~----~G-~--~--~-~~~~~e~~~~a~~~aDlVila 75 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLH--AANHSVFGYNRSRSGAKSAVD----EG-F--D--V-SADLEATLQRAAAEDALIVLA 75 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHH--HTTCCEEEECSCHHHHHHHHH----TT-C--C--E-ESCHHHHHHHHHHTTCEEEEC
T ss_pred CCEEEEEeecHHHHHHHHHHH--HCCCEEEEEeCCHHHHHHHHH----cC-C--e--e-eCCHHHHHHhcccCCCEEEEe
Confidence 468999999998876433333 257899999999998877654 56 2 1 1 3444332221 1247999987
Q ss_pred hhccCChhHHHHHHHHHHhhccCCcEEEE
Q 042119 210 ALVGMSKEEKLTILGHIRKYMKDGGILLV 238 (286)
Q Consensus 210 alvg~~~~~k~~vl~~l~~~l~pgg~lv~ 238 (286)
.-. .....+++++... +||.+|+-
T Consensus 76 vP~----~~~~~vl~~l~~~-~~~~iv~D 99 (341)
T 3ktd_A 76 VPM----TAIDSLLDAVHTH-APNNGFTD 99 (341)
T ss_dssp SCH----HHHHHHHHHHHHH-CTTCCEEE
T ss_pred CCH----HHHHHHHHHHHcc-CCCCEEEE
Confidence 533 4566788888875 88866543
No 442
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=96.03 E-value=0.0099 Score=57.35 Aligned_cols=101 Identities=14% Similarity=0.211 Sum_probs=64.6
Q ss_pred CEEEEeccCCChh-hHHHHHhhcCCCcEEEEEeCChHHHHHHHH------------HHHhcCCCCCCeEEEEccccchhh
Q 042119 132 KKVAFVGSGPMPL-TSIIMAKHHLTSTHFDNFDIDEAANDVARS------------IVASDAEFEGRMKFLTRDIMEVKE 198 (286)
Q Consensus 132 ~~VL~IG~G~lp~-tai~lA~~~~~g~~V~~iDid~~ai~~Ar~------------~~~~~g~l~~~i~f~~~D~~~~~~ 198 (286)
.+|..||.|=.|+ ++.+||+ .|.+|+|+|+|++.++.-++ ++++.- -+.+.+|. .|.. .
T Consensus 22 ~~IaViGlGYVGLp~A~~~A~---~G~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~-~~g~l~~t-t~~~---~ 93 (444)
T 3vtf_A 22 ASLSVLGLGYVGVVHAVGFAL---LGHRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRAL-SSGRLSFA-ESAE---E 93 (444)
T ss_dssp CEEEEECCSHHHHHHHHHHHH---HTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHH-HTTCEEEC-SSHH---H
T ss_pred CEEEEEccCHHHHHHHHHHHh---CCCcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHH-HcCCeeEE-cCHH---H
Confidence 5899999998887 4567776 68999999999999876532 222210 12356663 3332 2
Q ss_pred cCCCcceeehhhhcc------CChhHHHHHHHHHHhhccC---CcEEEEee
Q 042119 199 QLGEYDCIFLAALVG------MSKEEKLTILGHIRKYMKD---GGILLVRS 240 (286)
Q Consensus 199 ~l~~fD~V~~aalvg------~~~~~k~~vl~~l~~~l~p---gg~lv~r~ 240 (286)
.+...|++|++.-.. .+...-..+.+.+.+.|++ |.+++++|
T Consensus 94 ai~~ad~~~I~VpTP~~~d~~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~eS 144 (444)
T 3vtf_A 94 AVAATDATFIAVGTPPAPDGSADLRYVEAAARAVGRGIRAKGRWHLVVVKS 144 (444)
T ss_dssp HHHTSSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHHHHCSCCEEEECS
T ss_pred HHhcCCceEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhhcCCCeEEEEeC
Confidence 234678888764211 1122345677888888875 55777776
No 443
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=96.03 E-value=0.014 Score=52.32 Aligned_cols=89 Identities=17% Similarity=0.202 Sum_probs=59.4
Q ss_pred CEEEEeccCCChhhHHH-HHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeehhh
Q 042119 132 KKVAFVGSGPMPLTSII-MAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFLAA 210 (286)
Q Consensus 132 ~~VL~IG~G~lp~tai~-lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~aa 210 (286)
++|.+||+|.+|..... |++ .|.+|+++|++++..+..++ .| +.+ +.|..+ .....|+|+++.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~---~G~~V~~~d~~~~~~~~~~~----~g-----~~~-~~~~~~---~~~~aDvvi~~v 67 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLK---AGYLLNVFDLVQSAVDGLVA----AG-----ASA-ARSARD---AVQGADVVISML 67 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHH---TTCEEEEECSSHHHHHHHHH----TT-----CEE-CSSHHH---HHTTCSEEEECC
T ss_pred CEEEEEeecHHHHHHHHHHHh---CCCeEEEEcCCHHHHHHHHH----CC-----CeE-cCCHHH---HHhCCCeEEEEC
Confidence 68999999999876443 333 68899999999988765544 35 222 233322 234689999774
Q ss_pred hccCChhHHHHHHH---HHHhhccCCcEEEEe
Q 042119 211 LVGMSKEEKLTILG---HIRKYMKDGGILLVR 239 (286)
Q Consensus 211 lvg~~~~~k~~vl~---~l~~~l~pgg~lv~r 239 (286)
-. ...-..++. .+.+.++||.+++..
T Consensus 68 p~---~~~~~~v~~~~~~~~~~l~~~~~vi~~ 96 (302)
T 2h78_A 68 PA---SQHVEGLYLDDDGLLAHIAPGTLVLEC 96 (302)
T ss_dssp SC---HHHHHHHHHSSSCGGGSSCSSCEEEEC
T ss_pred CC---HHHHHHHHcCchhHHhcCCCCcEEEEC
Confidence 21 123345666 777889999887764
No 444
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=96.03 E-value=0.0087 Score=54.76 Aligned_cols=121 Identities=10% Similarity=0.100 Sum_probs=67.0
Q ss_pred chhhhhHHHHHHHHhcCCCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEE
Q 042119 111 NYVKLSKLEYTILSENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLT 190 (286)
Q Consensus 111 ny~~l~~~E~~~l~~~~~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~ 190 (286)
-+.+|.+.. .+....++++|+|+||+|+|.|-..+.+ .+-..|+|+|+........+. +...+. +-+.+.+
T Consensus 66 aa~KL~ei~----ek~l~~~g~~vlDLGaaPGgWsqva~~~--~gv~sV~Gvdlg~~~~~~P~~-~~~~~~--~iv~~~~ 136 (300)
T 3eld_A 66 GAAKIRWLH----ERGYLRITGRVLDLGCGRGGWSYYAAAQ--KEVMSVKGYTLGIEGHEKPIH-MQTLGW--NIVKFKD 136 (300)
T ss_dssp THHHHHHHH----HHTSCCCCEEEEEETCTTCHHHHHHHTS--TTEEEEEEECCCCTTSCCCCC-CCBTTG--GGEEEEC
T ss_pred HHHHHHHHH----HhCCCCCCCEEEEcCCCCCHHHHHHHHh--cCCceeeeEEecccccccccc-ccccCC--ceEEeec
Confidence 344555543 2223478899999999999998665543 244579999997532100000 001110 2233332
Q ss_pred c-cccchhhcCCCcceeehhhh--ccCChhH---HHHHHHHHHhhccCC-cEEEEeecC
Q 042119 191 R-DIMEVKEQLGEYDCIFLAAL--VGMSKEE---KLTILGHIRKYMKDG-GILLVRSAK 242 (286)
Q Consensus 191 ~-D~~~~~~~l~~fD~V~~aal--vg~~~~~---k~~vl~~l~~~l~pg-g~lv~r~~~ 242 (286)
+ |+..+. -..||+|+.+.. .|...-+ -..+|+-..+.|+|| |.+++.-..
T Consensus 137 ~~di~~l~--~~~~DlVlsD~APnsG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~ 193 (300)
T 3eld_A 137 KSNVFTMP--TEPSDTLLCDIGESSSNPLVERDRTMKVLENFERWKHVNTENFCVKVLA 193 (300)
T ss_dssp SCCTTTSC--CCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESS
T ss_pred CceeeecC--CCCcCEEeecCcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecc
Confidence 2 332221 246999986532 1221111 134566678899999 999997644
No 445
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=96.02 E-value=0.0097 Score=55.86 Aligned_cols=110 Identities=9% Similarity=-0.016 Sum_probs=73.2
Q ss_pred CCCEEEEeccCCChhhHHHHHh-------------h-cCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccc
Q 042119 130 QPKKVAFVGSGPMPLTSIIMAK-------------H-HLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIME 195 (286)
Q Consensus 130 ~~~~VL~IG~G~lp~tai~lA~-------------~-~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~ 195 (286)
.+-+|+|+||+.+|-|...+.. + ..|..+|..-|.-...-...-+.+.... -..+--|+.|....
T Consensus 51 ~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~-~~~~~~f~~gvpgS 129 (359)
T 1m6e_X 51 TRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIEN-DVDGVCFINGVPGS 129 (359)
T ss_dssp SEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSC-SCTTCEEEEEEESC
T ss_pred CceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhc-ccCCCEEEEecchh
Confidence 4578999999988877654443 0 2467889999988776665555433211 01245788887665
Q ss_pred ---hhhcCCCcceeehhhhccCCh--------------------------------hHHHHHHHHHHhhccCCcEEEEee
Q 042119 196 ---VKEQLGEYDCIFLAALVGMSK--------------------------------EEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 196 ---~~~~l~~fD~V~~aalvg~~~--------------------------------~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
.+.+-+.+|+||-.+.++|-. .+-..+|+..++.|+|||++++..
T Consensus 130 Fy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~ 209 (359)
T 1m6e_X 130 FYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTI 209 (359)
T ss_dssp SSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEE
T ss_pred hhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEE
Confidence 344456899998665444411 123456999999999999998864
No 446
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=96.01 E-value=0.01 Score=53.54 Aligned_cols=93 Identities=17% Similarity=0.180 Sum_probs=60.3
Q ss_pred CCCEEEEeccCCChhhHH-HHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeeh
Q 042119 130 QPKKVAFVGSGPMPLTSI-IMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFL 208 (286)
Q Consensus 130 ~~~~VL~IG~G~lp~tai-~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~ 208 (286)
..++|.+||+|.+|.... .|++ .|.+|+++|++++.++...+ .|. . ..+.|..+ .....|+|++
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~---~G~~V~~~dr~~~~~~~~~~----~g~---~--~~~~~~~e---~~~~aDvvi~ 70 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLR---AGLSTWGADLNPQACANLLA----EGA---C--GAAASARE---FAGVVDALVI 70 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHH---TTCEEEEECSCHHHHHHHHH----TTC---S--EEESSSTT---TTTTCSEEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHH---CCCeEEEEECCHHHHHHHHH----cCC---c--cccCCHHH---HHhcCCEEEE
Confidence 347899999999887533 3344 68899999999988776544 352 1 12334322 2356899997
Q ss_pred hhhccCChhHHHHHH---HHHHhhccCCcEEEEee
Q 042119 209 AALVGMSKEEKLTIL---GHIRKYMKDGGILLVRS 240 (286)
Q Consensus 209 aalvg~~~~~k~~vl---~~l~~~l~pgg~lv~r~ 240 (286)
+.-- ...-..++ +.+.+.++||.+++..+
T Consensus 71 ~vp~---~~~~~~v~~~~~~l~~~l~~g~ivv~~s 102 (303)
T 3g0o_A 71 LVVN---AAQVRQVLFGEDGVAHLMKPGSAVMVSS 102 (303)
T ss_dssp CCSS---HHHHHHHHC--CCCGGGSCTTCEEEECS
T ss_pred ECCC---HHHHHHHHhChhhHHhhCCCCCEEEecC
Confidence 6421 12233455 66778899998887654
No 447
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=96.01 E-value=0.021 Score=55.26 Aligned_cols=102 Identities=21% Similarity=0.218 Sum_probs=65.5
Q ss_pred CEEEEeccCCChhh-HHHHHhhcCCCcEEEEEeCChHHHHHHHHH------------HHhcCCCCCCeEEEEccccchhh
Q 042119 132 KKVAFVGSGPMPLT-SIIMAKHHLTSTHFDNFDIDEAANDVARSI------------VASDAEFEGRMKFLTRDIMEVKE 198 (286)
Q Consensus 132 ~~VL~IG~G~lp~t-ai~lA~~~~~g~~V~~iDid~~ai~~Ar~~------------~~~~g~l~~~i~f~~~D~~~~~~ 198 (286)
++|.+||+|.+|.+ +..|++ ..+|.+|+++|++++.++..++- +.... ..++++ +.|..+
T Consensus 10 mkI~VIG~G~vG~~~A~~La~-~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~--~~~l~~-t~~~~~--- 82 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAH-KCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAAR--GRNLFF-SSDIPK--- 82 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHH-HCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHB--TTTEEE-ESCHHH---
T ss_pred CEEEEECCCHHHHHHHHHHHh-cCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhh--cCCEEE-ECCHHH---
Confidence 69999999999976 455666 23478999999999988765431 11100 123444 233322
Q ss_pred cCCCcceeehhhhccC-----------ChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 199 QLGEYDCIFLAALVGM-----------SKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 199 ~l~~fD~V~~aalvg~-----------~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
.....|+||++.--.. +...-..+++.+.+.++||.+++..+
T Consensus 83 ~~~~aDvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~S 135 (481)
T 2o3j_A 83 AIAEADLIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVEKS 135 (481)
T ss_dssp HHHHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEECS
T ss_pred HhhcCCEEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEECC
Confidence 2235799998742110 11235678899999999998888754
No 448
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=96.00 E-value=0.0056 Score=59.18 Aligned_cols=113 Identities=14% Similarity=0.050 Sum_probs=74.0
Q ss_pred CccchhhhhHHHHHHHHhcC--CCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCC
Q 042119 108 YYGNYVKLSKLEYTILSENG--VVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGR 185 (286)
Q Consensus 108 y~~ny~~l~~~E~~~l~~~~--~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~ 185 (286)
.|+|+..+.+--...+.+.. .-.+++|+.||.|.+|......++. .|++|+.+|+||.....|. ..|
T Consensus 222 ~fDn~yG~~eslvdgI~Ratg~~L~GKTVgVIG~G~IGr~vA~~lra--fGa~Viv~d~dp~~a~~A~----~~G----- 290 (464)
T 3n58_A 222 KFDNKYGCKESLVDGIRRGTDVMMAGKVAVVCGYGDVGKGSAQSLAG--AGARVKVTEVDPICALQAA----MDG----- 290 (464)
T ss_dssp TTHHHHHHHHHHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSHHHHHHHH----HTT-----
T ss_pred hhhhhhcchHHHHHHHHHhcCCcccCCEEEEECcCHHHHHHHHHHHH--CCCEEEEEeCCcchhhHHH----hcC-----
Confidence 35777766665556555543 3688999999999999998888874 7999999999997543332 345
Q ss_pred eEEEEccccchhhcCCCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEeecCc
Q 042119 186 MKFLTRDIMEVKEQLGEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRSAKG 243 (286)
Q Consensus 186 i~f~~~D~~~~~~~l~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~~~g 243 (286)
+++ .+.. ..+...|+|+.+. + .+.-+-.+..+.||||++|+-- ++|
T Consensus 291 ~~v--v~Le---ElL~~ADIVv~at--g----t~~lI~~e~l~~MK~GAILINv-GRg 336 (464)
T 3n58_A 291 FEV--VTLD---DAASTADIVVTTT--G----NKDVITIDHMRKMKDMCIVGNI-GHF 336 (464)
T ss_dssp CEE--CCHH---HHGGGCSEEEECC--S----SSSSBCHHHHHHSCTTEEEEEC-SSS
T ss_pred cee--ccHH---HHHhhCCEEEECC--C----CccccCHHHHhcCCCCeEEEEc-CCC
Confidence 222 2332 2345789988653 1 1111224566788999987643 343
No 449
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=95.98 E-value=0.026 Score=51.42 Aligned_cols=92 Identities=14% Similarity=0.165 Sum_probs=60.8
Q ss_pred CCCEEEEeccCCChhhHHH-HHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeeh
Q 042119 130 QPKKVAFVGSGPMPLTSII-MAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFL 208 (286)
Q Consensus 130 ~~~~VL~IG~G~lp~tai~-lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~ 208 (286)
..++|.+||+|.+|..... |++ .|.+|+++|++++..+...+ .| +++ +.|..+. ..+.|+|++
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~---~G~~V~~~dr~~~~~~~l~~----~g-----~~~-~~~~~e~---~~~aDvVi~ 93 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCE---AGYALQVWNRTPARAASLAA----LG-----ATI-HEQARAA---ARDADIVVS 93 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHH---TTCEEEEECSCHHHHHHHHT----TT-----CEE-ESSHHHH---HTTCSEEEE
T ss_pred CCCEEEEECccHHHHHHHHHHHh---CCCeEEEEcCCHHHHHHHHH----CC-----CEe-eCCHHHH---HhcCCEEEE
Confidence 4579999999999875433 344 68899999999987655433 25 232 2343332 346899997
Q ss_pred hhhccCChhHHHHHHH--HHHhhccCCcEEEEee
Q 042119 209 AALVGMSKEEKLTILG--HIRKYMKDGGILLVRS 240 (286)
Q Consensus 209 aalvg~~~~~k~~vl~--~l~~~l~pgg~lv~r~ 240 (286)
+.-- ...-..++. .+.+.++||.+++..+
T Consensus 94 ~vp~---~~~~~~v~~~~~~~~~l~~~~~vi~~s 124 (320)
T 4dll_A 94 MLEN---GAVVQDVLFAQGVAAAMKPGSLFLDMA 124 (320)
T ss_dssp CCSS---HHHHHHHHTTTCHHHHCCTTCEEEECS
T ss_pred ECCC---HHHHHHHHcchhHHhhCCCCCEEEecC
Confidence 6421 123345665 6778889998887654
No 450
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=95.95 E-value=0.014 Score=56.66 Aligned_cols=97 Identities=13% Similarity=0.193 Sum_probs=63.5
Q ss_pred CCCEEEEeccCCChhhHH-HHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeeh
Q 042119 130 QPKKVAFVGSGPMPLTSI-IMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFL 208 (286)
Q Consensus 130 ~~~~VL~IG~G~lp~tai-~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~ 208 (286)
..++|.+||+|.+|.... .|++ .|.+|+++|++++.++...+. .+ +..+.. +.|..++...++..|+|++
T Consensus 14 ~~~~IgvIGlG~MG~~lA~~La~---~G~~V~v~~r~~~~~~~l~~~---~~--~~gi~~-~~s~~e~v~~l~~aDvVil 84 (480)
T 2zyd_A 14 SKQQIGVVGMAVMGRNLALNIES---RGYTVSIFNRSREKTEEVIAE---NP--GKKLVP-YYTVKEFVESLETPRRILL 84 (480)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHT---TTCCEEEECSSHHHHHHHHHH---ST--TSCEEE-CSSHHHHHHTBCSSCEEEE
T ss_pred CCCeEEEEccHHHHHHHHHHHHh---CCCeEEEEeCCHHHHHHHHhh---CC--CCCeEE-eCCHHHHHhCCCCCCEEEE
Confidence 457899999999887633 3443 688999999999887655442 21 023332 3455454444445899997
Q ss_pred hhhccCChhHHHHHHHHHHhhccCCcEEEE
Q 042119 209 AALVGMSKEEKLTILGHIRKYMKDGGILLV 238 (286)
Q Consensus 209 aalvg~~~~~k~~vl~~l~~~l~pgg~lv~ 238 (286)
+.--+ ..-..+++.+.+.++||.+|+-
T Consensus 85 ~Vp~~---~~v~~vl~~l~~~l~~g~iIId 111 (480)
T 2zyd_A 85 MVKAG---AGTDAAIDSLKPYLDKGDIIID 111 (480)
T ss_dssp CSCSS---SHHHHHHHHHGGGCCTTCEEEE
T ss_pred ECCCH---HHHHHHHHHHHhhcCCCCEEEE
Confidence 64221 2345788999999999886664
No 451
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=95.92 E-value=0.037 Score=50.16 Aligned_cols=100 Identities=14% Similarity=0.136 Sum_probs=59.8
Q ss_pred CEEEEeccCCChhhHHHHHhhcCCC--cEEEEEeCChHHHHHHHH-HHHhcCCCCCCeEEEEccccchhhcCCCcceeeh
Q 042119 132 KKVAFVGSGPMPLTSIIMAKHHLTS--THFDNFDIDEAANDVARS-IVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFL 208 (286)
Q Consensus 132 ~~VL~IG~G~lp~tai~lA~~~~~g--~~V~~iDid~~ai~~Ar~-~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~ 208 (286)
++|..||+|.+|.+....... .| .+|+.+|++++.++.... +-.....+..++++...|. ..+.+.|+|++
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~--~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~----~~~~~aDvVii 75 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIA--QGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW----AALADADVVIS 75 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--HTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG----GGGTTCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHh--CCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCCH----HHhCCCCEEEE
Confidence 489999999988764432221 34 689999999987754433 2222211123455544553 34567999998
Q ss_pred hhhccCC----------------hhHHHHHHHHHHhhccCCcEEEE
Q 042119 209 AALVGMS----------------KEEKLTILGHIRKYMKDGGILLV 238 (286)
Q Consensus 209 aalvg~~----------------~~~k~~vl~~l~~~l~pgg~lv~ 238 (286)
+.-.... .+...++++.+.+. .|++.+++
T Consensus 76 av~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~-~~~~~ii~ 120 (309)
T 1hyh_A 76 TLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKES-GFHGVLVV 120 (309)
T ss_dssp CCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHT-TCCSEEEE
T ss_pred ecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCcEEEE
Confidence 7543110 01135667777665 47887766
No 452
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=95.92 E-value=0.0073 Score=52.81 Aligned_cols=87 Identities=23% Similarity=0.339 Sum_probs=56.0
Q ss_pred CEEEEeccCCChhhHHH-HHhhcCCCc----EEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCccee
Q 042119 132 KKVAFVGSGPMPLTSII-MAKHHLTST----HFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCI 206 (286)
Q Consensus 132 ~~VL~IG~G~lp~tai~-lA~~~~~g~----~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V 206 (286)
++|.+||+|.+|.+-.. |++ .|. +|+.+|++++..+...+ ..| +++ ..|..+. ..+.|+|
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~---~g~~~~~~V~~~~r~~~~~~~~~~---~~g-----~~~-~~~~~e~---~~~aDvV 67 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMIN---KNIVSSNQIICSDLNTANLKNASE---KYG-----LTT-TTDNNEV---AKNADIL 67 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHH---TTSSCGGGEEEECSCHHHHHHHHH---HHC-----CEE-CSCHHHH---HHHCSEE
T ss_pred CeEEEECccHHHHHHHHHHHh---CCCCCCCeEEEEeCCHHHHHHHHH---HhC-----CEE-eCChHHH---HHhCCEE
Confidence 58999999988865332 333 454 89999999987665543 245 222 2333332 2358999
Q ss_pred ehhhhccCChhHHHHHHHHHHhhccCCcEEE
Q 042119 207 FLAALVGMSKEEKLTILGHIRKYMKDGGILL 237 (286)
Q Consensus 207 ~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv 237 (286)
+++. +.....++++++.+.++||.+++
T Consensus 68 ilav----~~~~~~~v~~~l~~~l~~~~~vv 94 (247)
T 3gt0_A 68 ILSI----KPDLYASIINEIKEIIKNDAIIV 94 (247)
T ss_dssp EECS----CTTTHHHHC---CCSSCTTCEEE
T ss_pred EEEe----CHHHHHHHHHHHHhhcCCCCEEE
Confidence 9875 23567788999999998888666
No 453
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=95.89 E-value=0.022 Score=49.98 Aligned_cols=90 Identities=9% Similarity=0.118 Sum_probs=58.3
Q ss_pred CCEEEEeccCCChhhHHH-HHhhcCCCcE-EEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeeh
Q 042119 131 PKKVAFVGSGPMPLTSII-MAKHHLTSTH-FDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFL 208 (286)
Q Consensus 131 ~~~VL~IG~G~lp~tai~-lA~~~~~g~~-V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~ 208 (286)
+.+|.+||+|.+|..-.. +++ .|.+ |+.+|++++..+...+ ..| +.+ ..|..+ .+.+.|+|++
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~---~g~~~v~~~~~~~~~~~~~~~---~~g-----~~~-~~~~~~---~~~~~Dvvi~ 74 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYR---KGFRIVQVYSRTEESARELAQ---KVE-----AEY-TTDLAE---VNPYAKLYIV 74 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHH---HTCCEEEEECSSHHHHHHHHH---HTT-----CEE-ESCGGG---SCSCCSEEEE
T ss_pred CCeEEEEcCCHHHHHHHHHHHH---CCCeEEEEEeCCHHHHHHHHH---HcC-----Cce-eCCHHH---HhcCCCEEEE
Confidence 468999999988765332 333 4666 8999999987765443 345 222 234322 3357899998
Q ss_pred hhhccCChhHHHHHHHHHHhhccCCcEEEEe
Q 042119 209 AALVGMSKEEKLTILGHIRKYMKDGGILLVR 239 (286)
Q Consensus 209 aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r 239 (286)
+.-- ..-.++++.+.+.+++|.+++--
T Consensus 75 av~~----~~~~~v~~~l~~~~~~~~ivv~~ 101 (266)
T 3d1l_A 75 SLKD----SAFAELLQGIVEGKREEALMVHT 101 (266)
T ss_dssp CCCH----HHHHHHHHHHHTTCCTTCEEEEC
T ss_pred ecCH----HHHHHHHHHHHhhcCCCcEEEEC
Confidence 7432 23357888888888888766554
No 454
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=95.88 E-value=0.057 Score=49.07 Aligned_cols=104 Identities=23% Similarity=0.251 Sum_probs=60.9
Q ss_pred CEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHH-HHHHHHHhcCCCCCCeEEE-EccccchhhcCCCcceeehh
Q 042119 132 KKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAAND-VARSIVASDAEFEGRMKFL-TRDIMEVKEQLGEYDCIFLA 209 (286)
Q Consensus 132 ~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~-~Ar~~~~~~g~l~~~i~f~-~~D~~~~~~~l~~fD~V~~a 209 (286)
++|..||+|..|.+...+........+|+.+|++++.++ .+.++-+....+....++. +.| . ..+.+.|+|+++
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~---~a~~~aDiVVia 76 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-Y---SLLKGSEIIVVT 76 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-G---GGGTTCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCC-H---HHhCCCCEEEEC
Confidence 489999999988876554332122238999999998765 3333332221011234444 335 2 345688999987
Q ss_pred hhc----cCChhH----H----HHHHHHHHhhccCCcEEEEee
Q 042119 210 ALV----GMSKEE----K----LTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 210 alv----g~~~~~----k----~~vl~~l~~~l~pgg~lv~r~ 240 (286)
+-+ ||+..+ - ..+.+.+.+. .|++.+++-+
T Consensus 77 ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~iivvs 118 (294)
T 1oju_A 77 AGLARKPGMTRLDLAHKNAGIIKDIAKKIVEN-APESKILVVT 118 (294)
T ss_dssp CCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTT-STTCEEEECS
T ss_pred CCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEeC
Confidence 654 333222 1 2333445555 7899988865
No 455
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=95.87 E-value=0.028 Score=52.01 Aligned_cols=106 Identities=18% Similarity=0.188 Sum_probs=63.8
Q ss_pred CCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHH-HHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceee
Q 042119 129 VQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAAND-VARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIF 207 (286)
Q Consensus 129 ~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~-~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~ 207 (286)
+.+.+|..||+|.+|.+............+++.+|++++.++ .+..+..... +...+++..+|- .++.+.|+|+
T Consensus 7 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~-~~~~~~i~~~~~----~a~~~aDiVv 81 (326)
T 3vku_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALP-FTSPKKIYSAEY----SDAKDADLVV 81 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGG-GSCCCEEEECCG----GGGTTCSEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhh-hcCCcEEEECcH----HHhcCCCEEE
Confidence 567899999999988876654432222348999999987554 4455544333 224567665553 3456889998
Q ss_pred hhhhc----cCChhH--------HHHHHHHHHhhccCCcEEEEee
Q 042119 208 LAALV----GMSKEE--------KLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 208 ~aalv----g~~~~~--------k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
+++-+ ||+..+ -.++.+.+.+. .|++.+++-+
T Consensus 82 i~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~-~p~a~ilvvt 125 (326)
T 3vku_A 82 ITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDS-GFNGIFLVAA 125 (326)
T ss_dssp ECCCCC----------------CHHHHHHHHHTT-TCCSEEEECS
T ss_pred ECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhc-CCceEEEEcc
Confidence 87643 332222 12334444443 6889887754
No 456
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=95.84 E-value=0.025 Score=53.44 Aligned_cols=97 Identities=19% Similarity=0.231 Sum_probs=60.3
Q ss_pred CEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCC-C------------CCCeEEEEccccchhh
Q 042119 132 KKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAE-F------------EGRMKFLTRDIMEVKE 198 (286)
Q Consensus 132 ~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~-l------------~~~i~f~~~D~~~~~~ 198 (286)
++|.+||+|.+|........ . |.+|+++|++++.++..++ .+. . ..++++ +.|..+
T Consensus 1 MkI~VIG~G~vG~~~A~~La--~-G~~V~~~d~~~~~~~~l~~----~~~~i~e~~l~~~~~~~~~~l~~-t~~~~~--- 69 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLS--L-QNEVTIVDILPSKVDKINN----GLSPIQDEYIEYYLKSKQLSIKA-TLDSKA--- 69 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHT--T-TSEEEEECSCHHHHHHHHT----TCCSSCCHHHHHHHHHSCCCEEE-ESCHHH---
T ss_pred CEEEEECCCHHHHHHHHHHh--C-CCEEEEEECCHHHHHHHHc----CCCCcCCCCHHHHHHhccCcEEE-eCCHHH---
Confidence 47999999988876443332 3 7899999999988765432 220 0 013333 233222
Q ss_pred cCCCcceeehhhhccC-------ChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 199 QLGEYDCIFLAALVGM-------SKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 199 ~l~~fD~V~~aalvg~-------~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
.....|+||++.--.. +...-..+++.+.+ ++||.+++..+
T Consensus 70 ~~~~aDvviiavpt~~~~~~~~~dl~~v~~v~~~i~~-l~~~~iVV~~S 117 (402)
T 1dlj_A 70 AYKEAELVIIATPTNYNSRINYFDTQHVETVIKEVLS-VNSHATLIIKS 117 (402)
T ss_dssp HHHHCSEEEECCCCCEETTTTEECCHHHHHHHHHHHH-HCSSCEEEECS
T ss_pred HhcCCCEEEEecCCCcccCCCCccHHHHHHHHHHHHh-hCCCCEEEEeC
Confidence 2235799998732110 11135678889999 99999888754
No 457
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=95.81 E-value=0.034 Score=55.66 Aligned_cols=110 Identities=21% Similarity=0.252 Sum_probs=73.5
Q ss_pred CCCEEEEeccCCChhhHHHHHhhc-----------CCCcEEEEEeC---ChHHHHH-----------HHHHHHhcCC---
Q 042119 130 QPKKVAFVGSGPMPLTSIIMAKHH-----------LTSTHFDNFDI---DEAANDV-----------ARSIVASDAE--- 181 (286)
Q Consensus 130 ~~~~VL~IG~G~lp~tai~lA~~~-----------~~g~~V~~iDi---d~~ai~~-----------Ar~~~~~~g~--- 181 (286)
+.-+|+++|-| +|+..+...+.. ....++++++. +++-+.. ++++.+....
T Consensus 66 ~~~~i~e~gfG-~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~ 144 (676)
T 3ps9_A 66 PLFVVAESGFG-TGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLP 144 (676)
T ss_dssp SEEEEEEECCT-TSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCS
T ss_pred CceEEEEeCCc-hHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCC
Confidence 34599999999 588877665521 11256999999 7776653 3344443321
Q ss_pred ------C---CCCeEEEEccccchhhcC-----CCcceeehhhhcc-CChhH-HHHHHHHHHhhccCCcEEEEee
Q 042119 182 ------F---EGRMKFLTRDIMEVKEQL-----GEYDCIFLAALVG-MSKEE-KLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 182 ------l---~~~i~f~~~D~~~~~~~l-----~~fD~V~~aalvg-~~~~~-k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
+ .-++++..||+.+....+ ..||++|++.+-. .+++. -.+++..+++.++|||++..-+
T Consensus 145 ~~~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~ 219 (676)
T 3ps9_A 145 GCHRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFT 219 (676)
T ss_dssp EEEEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEEEEESC
T ss_pred CceEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCEEEecc
Confidence 0 124567889998776654 4699999987641 01111 2579999999999999998754
No 458
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=95.79 E-value=0.056 Score=50.10 Aligned_cols=105 Identities=14% Similarity=0.090 Sum_probs=65.7
Q ss_pred CCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHH-HHHHHHHhcCCCCCCeEEE-EccccchhhcCCCcceee
Q 042119 130 QPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAAND-VARSIVASDAEFEGRMKFL-TRDIMEVKEQLGEYDCIF 207 (286)
Q Consensus 130 ~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~-~Ar~~~~~~g~l~~~i~f~-~~D~~~~~~~l~~fD~V~ 207 (286)
+..+|..||+|.+|.+..........-.+++.+|++++.++ .+..+..... .....++. +.|. .++.+.|+|+
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~-~~~~~~i~~t~d~----~~~~daDiVI 94 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSL-FLHTAKIVSGKDY----SVSAGSKLVV 94 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGG-GSCCSEEEEESSS----CSCSSCSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhh-cccCCeEEEcCCH----HHhCCCCEEE
Confidence 56899999999988876654432122238999999998654 3444444322 11222333 3443 2467899999
Q ss_pred hhhhc----cCC--------hhHHHHHHHHHHhhccCCcEEEEee
Q 042119 208 LAALV----GMS--------KEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 208 ~aalv----g~~--------~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
+++-+ ||+ .+-..++.+.+.+. .|++.+++-+
T Consensus 95 itaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~-~P~a~ilvvt 138 (330)
T 3ldh_A 95 ITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKH-SPDCLKELHP 138 (330)
T ss_dssp ECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHH-CTTCEEEECS
T ss_pred EeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhh-CCCceEEeCC
Confidence 77533 332 13356777788887 8999887754
No 459
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=95.79 E-value=0.06 Score=52.86 Aligned_cols=126 Identities=10% Similarity=0.059 Sum_probs=80.1
Q ss_pred hhhhHHHHHHHHhcCCCCCCEEEEeccCCChhhHHHHHh--hcC---------CCcEEEEEeCChHHHHHHHHHHHhcCC
Q 042119 113 VKLSKLEYTILSENGVVQPKKVAFVGSGPMPLTSIIMAK--HHL---------TSTHFDNFDIDEAANDVARSIVASDAE 181 (286)
Q Consensus 113 ~~l~~~E~~~l~~~~~~~~~~VL~IG~G~lp~tai~lA~--~~~---------~g~~V~~iDid~~ai~~Ar~~~~~~g~ 181 (286)
..+++.=...+ .+.++.+|+|-.||++|+-....-. ... ....+.|+|+++.+..+|+-++--.|.
T Consensus 203 ~~Vv~lmv~l~---~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~ 279 (530)
T 3ufb_A 203 RPVVRFMVEVM---DPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGL 279 (530)
T ss_dssp HHHHHHHHHHH---CCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHhh---ccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCC
Confidence 34555444433 5677889999999998875433211 011 135699999999999999987766673
Q ss_pred CCCCeEEEEccccchhhc----CCCcceeehhhhccCC---------------hhHHHHHHHHHHhhcc-------CCcE
Q 042119 182 FEGRMKFLTRDIMEVKEQ----LGEYDCIFLAALVGMS---------------KEEKLTILGHIRKYMK-------DGGI 235 (286)
Q Consensus 182 l~~~i~f~~~D~~~~~~~----l~~fD~V~~aalvg~~---------------~~~k~~vl~~l~~~l~-------pgg~ 235 (286)
+.-++.++|....+.. ...||+|+..--.+.. ...-..+++++.+.|+ |||+
T Consensus 280 --~~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr 357 (530)
T 3ufb_A 280 --EYPRIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGR 357 (530)
T ss_dssp --SCCEEECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCE
T ss_pred --ccccccccccccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCce
Confidence 3457888887543321 2369999743211110 0112347889999887 6998
Q ss_pred EEEeecCc
Q 042119 236 LLVRSAKG 243 (286)
Q Consensus 236 lv~r~~~g 243 (286)
+.+--++|
T Consensus 358 ~avVlP~g 365 (530)
T 3ufb_A 358 AAVVVPNG 365 (530)
T ss_dssp EEEEEEHH
T ss_pred EEEEecch
Confidence 87765544
No 460
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=95.78 E-value=0.02 Score=51.53 Aligned_cols=90 Identities=17% Similarity=0.247 Sum_probs=61.4
Q ss_pred CCEEEEeccCCChhhHH-HHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeehh
Q 042119 131 PKKVAFVGSGPMPLTSI-IMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFLA 209 (286)
Q Consensus 131 ~~~VL~IG~G~lp~tai-~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~a 209 (286)
.++|.+||+|.+|.... .|++ .|.+|+++|++++.++..++ .| +++ +.|..+ ... .|+||++
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~---~G~~V~~~dr~~~~~~~~~~----~g-----~~~-~~~~~~---~~~-aDvvi~~ 77 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTE---WPGGVTVYDIRIEAMTPLAE----AG-----ATL-ADSVAD---VAA-ADLIHIT 77 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTT---STTCEEEECSSTTTSHHHHH----TT-----CEE-CSSHHH---HTT-SSEEEEC
T ss_pred CCeEEEECcCHHHHHHHHHHHH---CCCeEEEEeCCHHHHHHHHH----CC-----CEE-cCCHHH---HHh-CCEEEEE
Confidence 46899999999987533 3333 68899999999988766544 35 222 234332 234 8999976
Q ss_pred hhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 210 ALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 210 alvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
.-- ...-..+++.+.+.++||.+++..+
T Consensus 78 vp~---~~~~~~v~~~l~~~l~~g~ivv~~s 105 (296)
T 3qha_A 78 VLD---DAQVREVVGELAGHAKPGTVIAIHS 105 (296)
T ss_dssp CSS---HHHHHHHHHHHHTTCCTTCEEEECS
T ss_pred CCC---hHHHHHHHHHHHHhcCCCCEEEEeC
Confidence 421 2233467899999999998887654
No 461
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=95.76 E-value=0.022 Score=52.49 Aligned_cols=94 Identities=20% Similarity=0.189 Sum_probs=61.4
Q ss_pred CCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHH-HHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeehh
Q 042119 131 PKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAA-NDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFLA 209 (286)
Q Consensus 131 ~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~a-i~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~a 209 (286)
+++|.+||+|.+|.+-....+. .|.+|+.+|.+++. .+.+ ...| + ++. |..+. +...|+|+++
T Consensus 16 ~~~I~IIG~G~mG~alA~~L~~--~G~~V~~~~~~~~~~~~~a----~~~G-~----~~~--~~~e~---~~~aDvVila 79 (338)
T 1np3_A 16 GKKVAIIGYGSQGHAHACNLKD--SGVDVTVGLRSGSATVAKA----EAHG-L----KVA--DVKTA---VAAADVVMIL 79 (338)
T ss_dssp TSCEEEECCSHHHHHHHHHHHH--TTCCEEEECCTTCHHHHHH----HHTT-C----EEE--CHHHH---HHTCSEEEEC
T ss_pred CCEEEEECchHHHHHHHHHHHH--CcCEEEEEECChHHHHHHH----HHCC-C----EEc--cHHHH---HhcCCEEEEe
Confidence 4689999999988765433332 57889999999764 4444 3456 2 222 43332 3468999987
Q ss_pred hhccCChhHHHHHHH-HHHhhccCCcEEEEeecCccee
Q 042119 210 ALVGMSKEEKLTILG-HIRKYMKDGGILLVRSAKGARA 246 (286)
Q Consensus 210 alvg~~~~~k~~vl~-~l~~~l~pgg~lv~r~~~g~r~ 246 (286)
.-. ..-..+++ ++.+.++||.+|+. .+|...
T Consensus 80 vp~----~~~~~v~~~~i~~~l~~~~ivi~--~~gv~~ 111 (338)
T 1np3_A 80 TPD----EFQGRLYKEEIEPNLKKGATLAF--AHGFSI 111 (338)
T ss_dssp SCH----HHHHHHHHHHTGGGCCTTCEEEE--SCCHHH
T ss_pred CCc----HHHHHHHHHHHHhhCCCCCEEEE--cCCchh
Confidence 432 33357887 88889999987773 355443
No 462
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=95.75 E-value=0.05 Score=52.91 Aligned_cols=77 Identities=19% Similarity=0.302 Sum_probs=49.6
Q ss_pred CCEEEEeccCCChhhH---HHHHh-hcCCCcEEEEEeCChHHHHHHHHHHHhc--CCCCCCeEEEE-ccccchhhcCCCc
Q 042119 131 PKKVAFVGSGPMPLTS---IIMAK-HHLTSTHFDNFDIDEAANDVARSIVASD--AEFEGRMKFLT-RDIMEVKEQLGEY 203 (286)
Q Consensus 131 ~~~VL~IG~G~lp~ta---i~lA~-~~~~g~~V~~iDid~~ai~~Ar~~~~~~--g~l~~~i~f~~-~D~~~~~~~l~~f 203 (286)
..+|..||+|.+|.+. ..+++ ..+++.+|+-+|++++.++.+....... + .....++.. .|. ..++.+.
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l~~~~~~~~~~l~~-~~~~~~I~~ttD~---~eal~dA 78 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEE-VGADLKFEKTMNL---DDVIIDA 78 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHH-TTCCCEEEEESCH---HHHHTTC
T ss_pred CCEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHHHHHHHHHHHHhcc-CCCCcEEEEECCH---HHHhCCC
Confidence 4699999999766543 24543 1234889999999999888776665432 1 112344443 343 2345678
Q ss_pred ceeehhhh
Q 042119 204 DCIFLAAL 211 (286)
Q Consensus 204 D~V~~aal 211 (286)
|+|++++-
T Consensus 79 D~VIiaag 86 (480)
T 1obb_A 79 DFVINTAM 86 (480)
T ss_dssp SEEEECCC
T ss_pred CEEEECCC
Confidence 99998873
No 463
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=95.74 E-value=0.095 Score=48.44 Aligned_cols=104 Identities=16% Similarity=0.251 Sum_probs=72.1
Q ss_pred CCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCC-------------------CCCCeEEEE
Q 042119 130 QPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAE-------------------FEGRMKFLT 190 (286)
Q Consensus 130 ~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~-------------------l~~~i~f~~ 190 (286)
+...|+.+||| +-..+..+.. ..++.++.-||. |+.+++-++++...+. ..++.+++.
T Consensus 97 ~~~qVV~LGaG-lDTr~~RL~~-~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~ 173 (334)
T 1rjd_A 97 EKVQVVNLGCG-SDLRMLPLLQ-MFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAA 173 (334)
T ss_dssp SSEEEEEETCT-TCCTHHHHHH-HCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEE
T ss_pred CCcEEEEeCCC-CccHHHHhcC-cCCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEe
Confidence 56899999999 5666676765 245777777777 9999999999887521 136899999
Q ss_pred ccccchhh------cC---CCcceeehh-hhccCChhHHHHHHHHHHhhccCCcEEE
Q 042119 191 RDIMEVKE------QL---GEYDCIFLA-ALVGMSKEEKLTILGHIRKYMKDGGILL 237 (286)
Q Consensus 191 ~D~~~~~~------~l---~~fD~V~~a-alvg~~~~~k~~vl~~l~~~l~pgg~lv 237 (286)
+|+.+... .. +...+++.. .+.-++.+.-.++++.+.+.. |||.++
T Consensus 174 ~DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v 229 (334)
T 1rjd_A 174 CDLNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWI 229 (334)
T ss_dssp CCTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEE
T ss_pred cCCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEE
Confidence 99987422 12 123343332 233567777788999999887 666654
No 464
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=95.73 E-value=0.018 Score=55.40 Aligned_cols=102 Identities=18% Similarity=0.194 Sum_probs=63.5
Q ss_pred CEEEEeccCCChhhH-HHHHhhcCCCcEEEEEeCChHHHHHHHH------------HHHhcCCCCCCeEEEEccccchhh
Q 042119 132 KKVAFVGSGPMPLTS-IIMAKHHLTSTHFDNFDIDEAANDVARS------------IVASDAEFEGRMKFLTRDIMEVKE 198 (286)
Q Consensus 132 ~~VL~IG~G~lp~ta-i~lA~~~~~g~~V~~iDid~~ai~~Ar~------------~~~~~g~l~~~i~f~~~D~~~~~~ 198 (286)
++|.+||+|.+|... ..|++ ..+|.+|+++|++++.++..++ .+.+. ...++++ +.|..+
T Consensus 6 mkI~VIG~G~mG~~lA~~La~-~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~--~~~~~~~-t~~~~e--- 78 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAH-MCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESC--RGKNLFF-STNIDD--- 78 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHH-HCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHH--BTTTEEE-ESCHHH---
T ss_pred cEEEEECCCHHHHHHHHHHHh-cCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHh--hcCCEEE-ECCHHH---
Confidence 689999999999753 44555 2348899999999998876432 22211 0124544 334322
Q ss_pred cCCCcceeehhhhccC-----------ChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 199 QLGEYDCIFLAALVGM-----------SKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 199 ~l~~fD~V~~aalvg~-----------~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
...+.|+||++.--.. +...-..+++.+.+.++||.+++..+
T Consensus 79 ~~~~aDvViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~S 131 (467)
T 2q3e_A 79 AIKEADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKS 131 (467)
T ss_dssp HHHHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECS
T ss_pred HHhcCCEEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECC
Confidence 2235799997742111 01113467888999999988877654
No 465
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=95.70 E-value=0.018 Score=51.32 Aligned_cols=90 Identities=16% Similarity=0.053 Sum_probs=57.8
Q ss_pred CEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeehhhh
Q 042119 132 KKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFLAAL 211 (286)
Q Consensus 132 ~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~aal 211 (286)
.+|.+||+|.+|........ ..|.+|+.+|++++..+..++ .| +.+ ..|..+. +.++|+|+++.-
T Consensus 6 m~i~iiG~G~~G~~~a~~l~--~~g~~V~~~~~~~~~~~~~~~----~g-----~~~-~~~~~~~---~~~~D~vi~~v~ 70 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLL--KAGYSLVVSDRNPEAIADVIA----AG-----AET-ASTAKAI---AEQCDVIITMLP 70 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHH--HTTCEEEEECSCHHHHHHHHH----TT-----CEE-CSSHHHH---HHHCSEEEECCS
T ss_pred ceEEEECchHHHHHHHHHHH--hCCCEEEEEeCCHHHHHHHHH----CC-----Cee-cCCHHHH---HhCCCEEEEECC
Confidence 58999999999876443322 157899999999987765443 25 222 2333222 235899997742
Q ss_pred ccCChhHHHHHH---HHHHhhccCCcEEEEe
Q 042119 212 VGMSKEEKLTIL---GHIRKYMKDGGILLVR 239 (286)
Q Consensus 212 vg~~~~~k~~vl---~~l~~~l~pgg~lv~r 239 (286)
. ...-..++ +.+.+.++||.+++.-
T Consensus 71 ~---~~~~~~~~~~~~~l~~~l~~~~~vv~~ 98 (299)
T 1vpd_A 71 N---SPHVKEVALGENGIIEGAKPGTVLIDM 98 (299)
T ss_dssp S---HHHHHHHHHSTTCHHHHCCTTCEEEEC
T ss_pred C---HHHHHHHHhCcchHhhcCCCCCEEEEC
Confidence 1 12334566 5777889999877654
No 466
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=95.70 E-value=0.027 Score=51.22 Aligned_cols=93 Identities=11% Similarity=0.119 Sum_probs=59.0
Q ss_pred CCCEEEEeccCCChhhHH-HHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCC---CCeEEE-----EccccchhhcC
Q 042119 130 QPKKVAFVGSGPMPLTSI-IMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFE---GRMKFL-----TRDIMEVKEQL 200 (286)
Q Consensus 130 ~~~~VL~IG~G~lp~tai-~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~---~~i~f~-----~~D~~~~~~~l 200 (286)
...+|+.||+|.+|.... .|++ .|.+|+.+ .+++.++..++. | +. ....+. +.|. ...
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~---~G~~V~l~-~~~~~~~~i~~~----g-~~~~~~~~~~~~~~~~~~~~----~~~ 84 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLAR---AGHEVILI-ARPQHVQAIEAT----G-LRLETQSFDEQVKVSASSDP----SAV 84 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHH---TTCEEEEE-CCHHHHHHHHHH----C-EEEECSSCEEEECCEEESCG----GGG
T ss_pred cCCcEEEECcCHHHHHHHHHHHH---CCCeEEEE-EcHhHHHHHHhC----C-eEEEcCCCcEEEeeeeeCCH----HHc
Confidence 457999999998885433 3444 67899999 998877665542 3 10 011111 1222 223
Q ss_pred CCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEe
Q 042119 201 GEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVR 239 (286)
Q Consensus 201 ~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r 239 (286)
..+|+|+++.-. ..-.++++.+.+.++|+..++.-
T Consensus 85 ~~~D~vilavk~----~~~~~~l~~l~~~l~~~~~iv~~ 119 (318)
T 3hwr_A 85 QGADLVLFCVKS----TDTQSAALAMKPALAKSALVLSL 119 (318)
T ss_dssp TTCSEEEECCCG----GGHHHHHHHHTTTSCTTCEEEEE
T ss_pred CCCCEEEEEccc----ccHHHHHHHHHHhcCCCCEEEEe
Confidence 579999987422 34567899999999998766543
No 467
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=95.50 E-value=0.11 Score=45.24 Aligned_cols=106 Identities=12% Similarity=0.189 Sum_probs=72.3
Q ss_pred CCCEEEEeccCC---Chh-hHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhh-------
Q 042119 130 QPKKVAFVGSGP---MPL-TSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKE------- 198 (286)
Q Consensus 130 ~~~~VL~IG~G~---lp~-tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~------- 198 (286)
.+++|+..|++. +|. .+..|++ .|++|+.+|.++...+...++.+..+. .++.++.+|+.+...
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~---~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~ 80 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHE---AGARLIFTYAGERLEKSVHELAGTLDR--NDSIILPCDVTNDAEIETCFAS 80 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHH---TTCEEEEEESSGGGHHHHHHHHHTSSS--CCCEEEECCCSSSHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHH---CCCEEEEecCchHHHHHHHHHHHhcCC--CCceEEeCCCCCHHHHHHHHHH
Confidence 468999999642 333 3445555 799999999998888888888777662 489999999976321
Q ss_pred ---cCCCcceeehhhhcc-----------CChhHHH-----------HHHHHHHhhccCCcEEEEee
Q 042119 199 ---QLGEYDCIFLAALVG-----------MSKEEKL-----------TILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 199 ---~l~~fD~V~~aalvg-----------~~~~~k~-----------~vl~~l~~~l~pgg~lv~r~ 240 (286)
..+..|+++..+.+. .+.++.. .+++.+.+.|+++|.++.-+
T Consensus 81 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 147 (266)
T 3oig_A 81 IKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLT 147 (266)
T ss_dssp HHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEE
T ss_pred HHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEe
Confidence 224688887655331 1222222 25667788888888887765
No 468
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=95.48 E-value=0.03 Score=54.05 Aligned_cols=95 Identities=13% Similarity=0.138 Sum_probs=62.5
Q ss_pred CEEEEeccCCChhhHH-HHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeehhh
Q 042119 132 KKVAFVGSGPMPLTSI-IMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFLAA 210 (286)
Q Consensus 132 ~~VL~IG~G~lp~tai-~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~aa 210 (286)
.+|.+||+|.+|.... .|++ .|.+|+.+|++++.++...+. .+ +..+. .+.|..++...++..|+|+++.
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~---~G~~V~v~dr~~~~~~~l~~~---~~--~~gi~-~~~s~~e~v~~l~~aDvVilav 76 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVES---RGYTVAIYNRTTSKTEEVFKE---HQ--DKNLV-FTKTLEEFVGSLEKPRRIMLMV 76 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHH---TTCCEEEECSSHHHHHHHHHH---TT--TSCEE-ECSSHHHHHHTBCSSCEEEECC
T ss_pred CcEEEEeeHHHHHHHHHHHHh---CCCEEEEEcCCHHHHHHHHHh---Cc--CCCeE-EeCCHHHHHhhccCCCEEEEEc
Confidence 5899999998886533 3444 578999999999887665542 21 12343 2345545444444689999764
Q ss_pred hccCChhHHHHHHHHHHhhccCCcEEEE
Q 042119 211 LVGMSKEEKLTILGHIRKYMKDGGILLV 238 (286)
Q Consensus 211 lvg~~~~~k~~vl~~l~~~l~pgg~lv~ 238 (286)
-.+ ..-..+++.+.+.++||.+|+-
T Consensus 77 p~~---~~v~~vl~~l~~~l~~g~iiId 101 (474)
T 2iz1_A 77 QAG---AATDATIKSLLPLLDIGDILID 101 (474)
T ss_dssp CTT---HHHHHHHHHHGGGCCTTCEEEE
T ss_pred cCc---hHHHHHHHHHHhhCCCCCEEEE
Confidence 211 2345688889999999886664
No 469
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=95.41 E-value=0.02 Score=51.67 Aligned_cols=76 Identities=14% Similarity=0.218 Sum_probs=53.6
Q ss_pred CEEEEec-cCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeehhh
Q 042119 132 KKVAFVG-SGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFLAA 210 (286)
Q Consensus 132 ~~VL~IG-~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~aa 210 (286)
++|.+|| +|.+|.+.....+ ..|.+|+++|++++. |. .......|+|+++.
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~--~~G~~V~~~~~~~~~-----------------------~~---~~~~~~aDvVilav 73 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLR--ASGYPISILDREDWA-----------------------VA---ESILANADVVIVSV 73 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHH--TTTCCEEEECTTCGG-----------------------GH---HHHHTTCSEEEECS
T ss_pred CEEEEEcCCCHHHHHHHHHHH--hCCCeEEEEECCccc-----------------------CH---HHHhcCCCEEEEeC
Confidence 5899999 9988866443332 267899999998751 11 12235689999875
Q ss_pred hccCChhHHHHHHHHHHhhccCCcEEEEe
Q 042119 211 LVGMSKEEKLTILGHIRKYMKDGGILLVR 239 (286)
Q Consensus 211 lvg~~~~~k~~vl~~l~~~l~pgg~lv~r 239 (286)
-. ....++++++.+.++||.+|+.-
T Consensus 74 p~----~~~~~vl~~l~~~l~~~~iv~~~ 98 (298)
T 2pv7_A 74 PI----NLTLETIERLKPYLTENMLLADL 98 (298)
T ss_dssp CG----GGHHHHHHHHGGGCCTTSEEEEC
T ss_pred CH----HHHHHHHHHHHhhcCCCcEEEEC
Confidence 33 45678899999899998866653
No 470
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=95.40 E-value=0.028 Score=54.47 Aligned_cols=97 Identities=18% Similarity=0.240 Sum_probs=62.3
Q ss_pred CEEEEeccCCChhhHH-HHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCC--CCCCeEEEEccccchhhcCCCcceeeh
Q 042119 132 KKVAFVGSGPMPLTSI-IMAKHHLTSTHFDNFDIDEAANDVARSIVASDAE--FEGRMKFLTRDIMEVKEQLGEYDCIFL 208 (286)
Q Consensus 132 ~~VL~IG~G~lp~tai-~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~--l~~~i~f~~~D~~~~~~~l~~fD~V~~ 208 (286)
++|.+||+|.+|.... .|++ .|.+|+.+|++++.++...+. .|. ...++. .+.|..++...+...|+|++
T Consensus 2 MkIgVIG~G~mG~~lA~~La~---~G~~V~v~dr~~~~~~~l~~~---~g~~~~~~~i~-~~~~~~e~v~~l~~aDvVil 74 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAE---KGFKVAVFNRTYSKSEEFMKA---NASAPFAGNLK-AFETMEAFAASLKKPRKALI 74 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHH---TTCCEEEECSSHHHHHHHHHH---TTTSTTGGGEE-ECSCHHHHHHHBCSSCEEEE
T ss_pred CEEEEEChHHHHHHHHHHHHH---CCCEEEEEeCCHHHHHHHHHh---cCCCCCCCCeE-EECCHHHHHhcccCCCEEEE
Confidence 4799999998886533 3444 578999999999887655442 230 012232 23454444444446899997
Q ss_pred hhhccCChhHHHHHHHHHHhhccCCcEEEE
Q 042119 209 AALVGMSKEEKLTILGHIRKYMKDGGILLV 238 (286)
Q Consensus 209 aalvg~~~~~k~~vl~~l~~~l~pgg~lv~ 238 (286)
+.--+ ..-..+++.+.+.++||.+|+-
T Consensus 75 aVp~~---~~v~~vl~~l~~~l~~g~iIId 101 (478)
T 1pgj_A 75 LVQAG---AATDSTIEQLKKVFEKGDILVD 101 (478)
T ss_dssp CCCCS---HHHHHHHHHHHHHCCTTCEEEE
T ss_pred ecCCh---HHHHHHHHHHHhhCCCCCEEEE
Confidence 64221 2345688899999999886664
No 471
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=95.34 E-value=0.021 Score=50.97 Aligned_cols=90 Identities=12% Similarity=0.074 Sum_probs=59.9
Q ss_pred CEEEEeccCCChhhH-HHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeehhh
Q 042119 132 KKVAFVGSGPMPLTS-IIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFLAA 210 (286)
Q Consensus 132 ~~VL~IG~G~lp~ta-i~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~aa 210 (286)
++|.+||+|.+|... ..|++ .|.+|+++|++++..+..++ .| +++ +.|..+.. .+.|+|+++.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~---~G~~V~~~dr~~~~~~~~~~----~g-----~~~-~~~~~~~~---~~aDvvi~~v 65 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVK---AGCSVTIWNRSPEKAEELAA----LG-----AER-AATPCEVV---ESCPVTFAML 65 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHH---TTCEEEEECSSGGGGHHHHH----TT-----CEE-CSSHHHHH---HHCSEEEECC
T ss_pred CEEEEEeecHHHHHHHHHHHH---CCCeEEEEcCCHHHHHHHHH----CC-----Cee-cCCHHHHH---hcCCEEEEEc
Confidence 689999999988753 33444 68899999999998766544 35 222 23433322 3579999763
Q ss_pred hccCChhHHHHHH---HHHHhhccCCcEEEEee
Q 042119 211 LVGMSKEEKLTIL---GHIRKYMKDGGILLVRS 240 (286)
Q Consensus 211 lvg~~~~~k~~vl---~~l~~~l~pgg~lv~r~ 240 (286)
- +...-..++ +.+.+.++||.+++..+
T Consensus 66 p---~~~~~~~v~~~~~~l~~~l~~~~~vi~~s 95 (287)
T 3pef_A 66 A---DPAAAEEVCFGKHGVLEGIGEGRGYVDMS 95 (287)
T ss_dssp S---SHHHHHHHHHSTTCHHHHCCTTCEEEECS
T ss_pred C---CHHHHHHHHcCcchHhhcCCCCCEEEeCC
Confidence 2 112334566 77888999998877654
No 472
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=95.31 E-value=0.2 Score=43.90 Aligned_cols=104 Identities=15% Similarity=0.175 Sum_probs=70.6
Q ss_pred CCCEEEEeccCCChhhH---HHHHhhcCCCcEEEEEeCC------------hHHHHHHHHHHHhcCCCCCCeEEEEcccc
Q 042119 130 QPKKVAFVGSGPMPLTS---IIMAKHHLTSTHFDNFDID------------EAANDVARSIVASDAEFEGRMKFLTRDIM 194 (286)
Q Consensus 130 ~~~~VL~IG~G~lp~ta---i~lA~~~~~g~~V~~iDid------------~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~ 194 (286)
.+++||..|++ .|+.. ..|++ .|++|+.+|++ .+.++...+.+...| .++.++.+|+.
T Consensus 9 ~gk~vlVTGas-~gIG~~ia~~l~~---~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~~ 81 (287)
T 3pxx_A 9 QDKVVLVTGGA-RGQGRSHAVKLAE---EGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG---RKAYTAEVDVR 81 (287)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHH---TTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTT---SCEEEEECCTT
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHH---CCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcC---CceEEEEccCC
Confidence 46899999986 45543 33444 79999999998 777777776666666 58999999997
Q ss_pred chhh----------cCCCcceeehhhhcc-----CChhHHH-----------HHHHHHHhhccCCcEEEEee
Q 042119 195 EVKE----------QLGEYDCIFLAALVG-----MSKEEKL-----------TILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 195 ~~~~----------~l~~fD~V~~aalvg-----~~~~~k~-----------~vl~~l~~~l~pgg~lv~r~ 240 (286)
+... .++..|+++..+-+. .+.++.. .+++.+.+.|+.+|.++.-+
T Consensus 82 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 153 (287)
T 3pxx_A 82 DRAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTG 153 (287)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEec
Confidence 6432 224789888665431 1223222 34567788888888887765
No 473
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=95.29 E-value=0.013 Score=53.07 Aligned_cols=93 Identities=15% Similarity=0.248 Sum_probs=55.3
Q ss_pred CEEEEeccCCChhhHHH-HHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCC-----CCeEEEEccccchhhcCCCcce
Q 042119 132 KKVAFVGSGPMPLTSII-MAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFE-----GRMKFLTRDIMEVKEQLGEYDC 205 (286)
Q Consensus 132 ~~VL~IG~G~lp~tai~-lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~-----~~i~f~~~D~~~~~~~l~~fD~ 205 (286)
++|+.||+|.+|..-.. |++ .|.+|+.++.++ . +.+++.| +. ...++..-.+.+-......+|+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~---~g~~V~~~~r~~--~----~~i~~~g-~~~~~~~g~~~~~~~~~~~~~~~~~~~D~ 72 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQR---SGEDVHFLLRRD--Y----EAIAGNG-LKVFSINGDFTLPHVKGYRAPEEIGPMDL 72 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHH---TSCCEEEECSTT--H----HHHHHTC-EEEEETTCCEEESCCCEESCHHHHCCCSE
T ss_pred CEEEEECcCHHHHHHHHHHHH---CCCeEEEEEcCc--H----HHHHhCC-CEEEcCCCeEEEeeceeecCHHHcCCCCE
Confidence 58999999999876433 444 578999999986 2 2334445 21 1122100011111122357999
Q ss_pred eehhhhccCChhHHHHHHHHHHhhccCCcEEEE
Q 042119 206 IFLAALVGMSKEEKLTILGHIRKYMKDGGILLV 238 (286)
Q Consensus 206 V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~ 238 (286)
|+++.=. ..-.++++.+.+.++|+..++.
T Consensus 73 vilavk~----~~~~~~l~~l~~~l~~~~~iv~ 101 (312)
T 3hn2_A 73 VLVGLKT----FANSRYEELIRPLVEEGTQILT 101 (312)
T ss_dssp EEECCCG----GGGGGHHHHHGGGCCTTCEEEE
T ss_pred EEEecCC----CCcHHHHHHHHhhcCCCCEEEE
Confidence 9987321 2333688999999999876554
No 474
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=95.24 E-value=0.02 Score=52.38 Aligned_cols=98 Identities=13% Similarity=0.158 Sum_probs=59.9
Q ss_pred CCEEEEeccCCChhhHH-HHHhhcCCC-------cEEEEEeCChH-----HHHHHHHHHH---hc-CC-CCCCeEEEEcc
Q 042119 131 PKKVAFVGSGPMPLTSI-IMAKHHLTS-------THFDNFDIDEA-----ANDVARSIVA---SD-AE-FEGRMKFLTRD 192 (286)
Q Consensus 131 ~~~VL~IG~G~lp~tai-~lA~~~~~g-------~~V~~iDid~~-----ai~~Ar~~~~---~~-g~-l~~~i~f~~~D 192 (286)
.++|.+||+|.+|.+.. .|++ .| .+|+.+|++++ ..+..++.-. .. |. +..++.+ +.|
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~---~g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~ 83 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGG---NAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVA-VPD 83 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH---HHHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEE-ESS
T ss_pred CCeEEEECCCHHHHHHHHHHHh---cCCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEE-EcC
Confidence 35899999998876543 3444 45 78999999987 5544332100 00 10 1123333 233
Q ss_pred ccchhhcCCCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEe
Q 042119 193 IMEVKEQLGEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVR 239 (286)
Q Consensus 193 ~~~~~~~l~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r 239 (286)
..+ ....+|+|+++.- .....++++.+.+.++||.+++.-
T Consensus 84 ~~~---~~~~aD~Vilav~----~~~~~~v~~~i~~~l~~~~ivv~~ 123 (354)
T 1x0v_A 84 VVQ---AAEDADILIFVVP----HQFIGKICDQLKGHLKANATGISL 123 (354)
T ss_dssp HHH---HHTTCSEEEECCC----GGGHHHHHHHHTTCSCTTCEEEEC
T ss_pred HHH---HHcCCCEEEEeCC----HHHHHHHHHHHHhhCCCCCEEEEE
Confidence 322 2357899998742 256678999999999888766543
No 475
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=95.24 E-value=0.034 Score=50.79 Aligned_cols=102 Identities=14% Similarity=0.247 Sum_probs=62.9
Q ss_pred EEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHH-HHHHHHhcCCCCCCeEEEE-ccccchhhcCCCcceeehhh
Q 042119 133 KVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDV-ARSIVASDAEFEGRMKFLT-RDIMEVKEQLGEYDCIFLAA 210 (286)
Q Consensus 133 ~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~-Ar~~~~~~g~l~~~i~f~~-~D~~~~~~~l~~fD~V~~aa 210 (286)
||..||+|.+|.+.......... .+++-+|++++.++- +.++......+...+++.. .|. .++.+.|+|++++
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l-~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~----~a~~~aD~Vi~~a 75 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGY-DDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGSNSY----EDMRGSDIVLVTA 75 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTC-SCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG----GGGTTCSEEEECC
T ss_pred CEEEECcCHHHHHHHHHHHhCCC-CEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEECCCH----HHhCCCCEEEEeC
Confidence 58899999998876554432112 379999999987754 5555443110112334443 453 3567899999886
Q ss_pred hcc----CC--------hhHHHHHHHHHHhhccCCcEEEEee
Q 042119 211 LVG----MS--------KEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 211 lvg----~~--------~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
-+. |+ .+.+.++.+.+.+. .|++.+++-+
T Consensus 76 g~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~iiv~t 116 (308)
T 2d4a_B 76 GIGRKPGMTREQLLEANANTMADLAEKIKAY-AKDAIVVITT 116 (308)
T ss_dssp SCCCCSSCCTHHHHHHHHHHHHHHHHHHHHH-CTTCEEEECC
T ss_pred CCCCCCCCcHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEeC
Confidence 442 21 12266777777776 5999887753
No 476
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=95.22 E-value=0.13 Score=44.32 Aligned_cols=106 Identities=12% Similarity=0.098 Sum_probs=69.0
Q ss_pred CCCEEEEeccCCChhhHHHHHhh-cC-CCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhh---------
Q 042119 130 QPKKVAFVGSGPMPLTSIIMAKH-HL-TSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKE--------- 198 (286)
Q Consensus 130 ~~~~VL~IG~G~lp~tai~lA~~-~~-~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~--------- 198 (286)
.+++|+..|++ .++..- +|++ +. .|++|+.++.+++..+...+.+...| .++.++.+|+.+...
T Consensus 3 ~~k~vlITGas-ggIG~~-~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~ 77 (276)
T 1wma_A 3 GIHVALVTGGN-KGIGLA-IVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEG---LSPRFHQLDIDDLQSIRALRDFLR 77 (276)
T ss_dssp CCCEEEESSCS-SHHHHH-HHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTT---CCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHH-HHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcC---CeeEEEECCCCCHHHHHHHHHHHH
Confidence 46789998875 455433 3332 23 68999999999988777666666655 578999999876321
Q ss_pred -cCCCcceeehhhhccCC-------hhHH-----------HHHHHHHHhhccCCcEEEEee
Q 042119 199 -QLGEYDCIFLAALVGMS-------KEEK-----------LTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 199 -~l~~fD~V~~aalvg~~-------~~~k-----------~~vl~~l~~~l~pgg~lv~r~ 240 (286)
..+.+|+|+..+.+... .++. ..+++.+.+.|+++|.++.-+
T Consensus 78 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~s 138 (276)
T 1wma_A 78 KEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVS 138 (276)
T ss_dssp HHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred HhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEEC
Confidence 12368988865543211 1221 235566777887778877765
No 477
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=95.21 E-value=0.11 Score=47.28 Aligned_cols=100 Identities=14% Similarity=0.181 Sum_probs=60.6
Q ss_pred CEEEEeccCCChhhHHHHHhhcCCCc-EEEEEeCChHHHHH-HHHHHHh---cCCCCCCeEEEEccccchhhcCCCccee
Q 042119 132 KKVAFVGSGPMPLTSIIMAKHHLTST-HFDNFDIDEAANDV-ARSIVAS---DAEFEGRMKFLTRDIMEVKEQLGEYDCI 206 (286)
Q Consensus 132 ~~VL~IG~G~lp~tai~lA~~~~~g~-~V~~iDid~~ai~~-Ar~~~~~---~g~l~~~i~f~~~D~~~~~~~l~~fD~V 206 (286)
.+|..||+|.+|.+....... .|. .|+.+|++++.++- +.++.+. .+ ...++++. .|. .++.+.|+|
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~--~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~-~~~~i~~t-~d~----~a~~~aD~V 74 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAA--KELGDIVLLDIVEGVPQGKALDLYEASPIEG-FDVRVTGT-NNY----ADTANSDVI 74 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCSEEEEECSSSSHHHHHHHHHHTTHHHHT-CCCCEEEE-SCG----GGGTTCSEE
T ss_pred CEEEEECCCHHHHHHHHHHHH--CCCCeEEEEeCCccHHHHHHHhHHHhHhhcC-CCeEEEEC-CCH----HHHCCCCEE
Confidence 589999999999876554432 343 69999999987753 2332221 12 12334432 443 345688999
Q ss_pred ehhhhccC----C--------hhHHHHHHHHHHhhccCCcEEEEee
Q 042119 207 FLAALVGM----S--------KEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 207 ~~aalvg~----~--------~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
++++-++. + .+-+.++.+.+.+. .|++.+++-+
T Consensus 75 i~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~vi~~t 119 (309)
T 1ur5_A 75 VVTSGAPRKPGMSREDLIKVNADITRACISQAAPL-SPNAVIIMVN 119 (309)
T ss_dssp EECCCC--------CHHHHHHHHHHHHHHHHHGGG-CTTCEEEECC
T ss_pred EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEcC
Confidence 98864321 1 13344666666666 4899887753
No 478
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=95.19 E-value=0.022 Score=50.79 Aligned_cols=90 Identities=11% Similarity=0.028 Sum_probs=58.8
Q ss_pred CEEEEeccCCChhhH-HHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeehhh
Q 042119 132 KKVAFVGSGPMPLTS-IIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFLAA 210 (286)
Q Consensus 132 ~~VL~IG~G~lp~ta-i~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~aa 210 (286)
++|.+||+|.+|... ..|++ .|.+|+++|++++..+...+ .| +++ +.|..+.. ...|+|+++.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~---~G~~V~~~dr~~~~~~~~~~----~g-----~~~-~~~~~~~~---~~advvi~~v 65 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVR---AGFDVTVWNRNPAKCAPLVA----LG-----ARQ-ASSPAEVC---AACDITIAML 65 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHH---HTCCEEEECSSGGGGHHHHH----HT-----CEE-CSCHHHHH---HHCSEEEECC
T ss_pred CeEEEEccCHHHHHHHHHHHH---CCCeEEEEcCCHHHHHHHHH----CC-----Cee-cCCHHHHH---HcCCEEEEEc
Confidence 479999999999753 33444 57899999999998766554 25 222 23433322 3579999764
Q ss_pred hccCChhHHHHHH---HHHHhhccCCcEEEEee
Q 042119 211 LVGMSKEEKLTIL---GHIRKYMKDGGILLVRS 240 (286)
Q Consensus 211 lvg~~~~~k~~vl---~~l~~~l~pgg~lv~r~ 240 (286)
-- ...-..++ +.+.+.+++|.+++..+
T Consensus 66 ~~---~~~~~~v~~~~~~l~~~l~~g~~vv~~s 95 (287)
T 3pdu_A 66 AD---PAAAREVCFGANGVLEGIGGGRGYIDMS 95 (287)
T ss_dssp SS---HHHHHHHHHSTTCGGGTCCTTCEEEECS
T ss_pred CC---HHHHHHHHcCchhhhhcccCCCEEEECC
Confidence 21 12334556 67778888988877654
No 479
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=95.16 E-value=0.041 Score=48.56 Aligned_cols=91 Identities=12% Similarity=0.096 Sum_probs=54.2
Q ss_pred CCEEEEeccCCChhhHHH-HHhhcCCC-cEEEEEeCCh-------------------HHHHHHHHHHHhcCCCCCCeEEE
Q 042119 131 PKKVAFVGSGPMPLTSII-MAKHHLTS-THFDNFDIDE-------------------AANDVARSIVASDAEFEGRMKFL 189 (286)
Q Consensus 131 ~~~VL~IG~G~lp~tai~-lA~~~~~g-~~V~~iDid~-------------------~ai~~Ar~~~~~~g~l~~~i~f~ 189 (286)
+++|+.||+|.+|..... |++ .| .+++.+|.|. ...+.+.+.+.+.. -.-+++.+
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~---~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~n-p~~~v~~~ 106 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLAS---AGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRIN-PHIAITPV 106 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHH---HTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHC-TTSEEEEE
T ss_pred CCeEEEEeeCHHHHHHHHHHHH---cCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHC-CCcEEEEE
Confidence 579999999977655433 444 46 4899999997 55566666666554 12345555
Q ss_pred Eccccc--hhhcCCCcceeehhhhccCChhHHHHHHHHHHh
Q 042119 190 TRDIME--VKEQLGEYDCIFLAALVGMSKEEKLTILGHIRK 228 (286)
Q Consensus 190 ~~D~~~--~~~~l~~fD~V~~aalvg~~~~~k~~vl~~l~~ 228 (286)
..+..+ +...+++||+|+.+.- +.+.+..+.+...+
T Consensus 107 ~~~~~~~~~~~~~~~~DvVi~~~d---~~~~~~~l~~~~~~ 144 (249)
T 1jw9_B 107 NALLDDAELAALIAEHDLVLDCTD---NVAVRNQLNAGCFA 144 (249)
T ss_dssp CSCCCHHHHHHHHHTSSEEEECCS---SHHHHHHHHHHHHH
T ss_pred eccCCHhHHHHHHhCCCEEEEeCC---CHHHHHHHHHHHHH
Confidence 554432 2223457999996532 23455444444433
No 480
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=95.16 E-value=0.13 Score=46.68 Aligned_cols=101 Identities=19% Similarity=0.239 Sum_probs=59.2
Q ss_pred CEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHH-HHHHh---cCCCCCCeEEEE-ccccchhhcCCCccee
Q 042119 132 KKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVAR-SIVAS---DAEFEGRMKFLT-RDIMEVKEQLGEYDCI 206 (286)
Q Consensus 132 ~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar-~~~~~---~g~l~~~i~f~~-~D~~~~~~~l~~fD~V 206 (286)
++|..||+|.+|.+..........+.+|+.+|++++.++--. .+.+. .+ ...++.. .|. .++.+.|+|
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~---~~~~i~~t~d~----~~l~~aDvV 73 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGL---FDTKVTGSNDY----ADTANSDIV 73 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHT---CCCEEEEESCG----GGGTTCSEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhccc---CCcEEEECCCH----HHHCCCCEE
Confidence 479999999988875554432223789999999998776322 11111 12 1223322 443 235689999
Q ss_pred ehhhhc----cCChhH--------HHHHHHHHHhhccCCcEEEEee
Q 042119 207 FLAALV----GMSKEE--------KLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 207 ~~aalv----g~~~~~--------k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
+++.-. ++...+ ..++.+.+.+. .|++.+++-+
T Consensus 74 iiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~~~~~viv~t 118 (310)
T 1guz_A 74 IITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKH-SKNPIIIVVS 118 (310)
T ss_dssp EECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CSSCEEEECC
T ss_pred EEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEEc
Confidence 987643 222111 23555666666 5888776643
No 481
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=95.15 E-value=0.089 Score=48.26 Aligned_cols=104 Identities=20% Similarity=0.194 Sum_probs=58.9
Q ss_pred CCCEEEEec-cCCChhhHHHHHhhcCCC--cEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCccee
Q 042119 130 QPKKVAFVG-SGPMPLTSIIMAKHHLTS--THFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCI 206 (286)
Q Consensus 130 ~~~~VL~IG-~G~lp~tai~lA~~~~~g--~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V 206 (286)
.+.+|+.+| +|..|.+....... .| .+|+.+|++++ ...+.++... . ...++..+.+ ..+....+.+.|+|
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~--~g~~~ev~l~Di~~~-~~~~~dL~~~-~-~~~~v~~~~~-t~d~~~al~gaDvV 80 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKM--NPLVSVLHLYDVVNA-PGVTADISHM-D-TGAVVRGFLG-QQQLEAALTGMDLI 80 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHH--CTTEEEEEEEESSSH-HHHHHHHHTS-C-SSCEEEEEES-HHHHHHHHTTCSEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHh--CCCCCEEEEEeCCCc-HhHHHHhhcc-c-ccceEEEEeC-CCCHHHHcCCCCEE
Confidence 467999999 89888886654432 44 78999999987 3334443321 1 1123444323 12233345689999
Q ss_pred ehhhhcc----CChh--------HHHHHHHHHHhhccCCcEEEEee
Q 042119 207 FLAALVG----MSKE--------EKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 207 ~~aalvg----~~~~--------~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
|.++-+. ++.. --..+.+.+.+. .|++.+++.+
T Consensus 81 i~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~-~p~~~viv~S 125 (326)
T 1smk_A 81 IVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKC-CPRAIVNLIS 125 (326)
T ss_dssp EECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH-CTTSEEEECC
T ss_pred EEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEEC
Confidence 9876542 2111 112333444433 5788888754
No 482
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=95.13 E-value=0.015 Score=56.03 Aligned_cols=111 Identities=11% Similarity=0.045 Sum_probs=71.3
Q ss_pred ccchhhhhHHHHHHHHhcC--CCCCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCe
Q 042119 109 YGNYVKLSKLEYTILSENG--VVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRM 186 (286)
Q Consensus 109 ~~ny~~l~~~E~~~l~~~~--~~~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i 186 (286)
++|+..+.+.-...+.+.. .-.+++|..||.|.+|......++. .|++|+++|+++.....|. ..| .
T Consensus 187 ~Dn~~Gt~~slldgi~ratg~~L~GktVgIiG~G~IG~~vA~~Lka--~Ga~Viv~D~~p~~a~~A~----~~G-----~ 255 (436)
T 3h9u_A 187 FDNLYGCRESLVDGIKRATDVMIAGKTACVCGYGDVGKGCAAALRG--FGARVVVTEVDPINALQAA----MEG-----Y 255 (436)
T ss_dssp THHHHHHHHHHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSCHHHHHHHH----HTT-----C
T ss_pred hhccccchHHHHHHHHHhcCCcccCCEEEEEeeCHHHHHHHHHHHH--CCCEEEEECCChhhhHHHH----HhC-----C
Confidence 4666665555455554432 2468999999999999988888874 6899999999987654443 345 1
Q ss_pred EEEEccccchhhcCCCcceeehhhhccCChhHHHHHH-HHHHhhccCCcEEEEeecCc
Q 042119 187 KFLTRDIMEVKEQLGEYDCIFLAALVGMSKEEKLTIL-GHIRKYMKDGGILLVRSAKG 243 (286)
Q Consensus 187 ~f~~~D~~~~~~~l~~fD~V~~aalvg~~~~~k~~vl-~~l~~~l~pgg~lv~r~~~g 243 (286)
++ .+ +...+...|+|+.+.-- + .++ .+..+.||||++|+-- ++|
T Consensus 256 ~~--~s---L~eal~~ADVVilt~gt------~-~iI~~e~l~~MK~gAIVINv-gRg 300 (436)
T 3h9u_A 256 QV--LL---VEDVVEEAHIFVTTTGN------D-DIITSEHFPRMRDDAIVCNI-GHF 300 (436)
T ss_dssp EE--CC---HHHHTTTCSEEEECSSC------S-CSBCTTTGGGCCTTEEEEEC-SSS
T ss_pred ee--cC---HHHHHhhCCEEEECCCC------c-CccCHHHHhhcCCCcEEEEe-CCC
Confidence 22 23 33445678999864311 1 111 2456788999876654 455
No 483
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=95.11 E-value=0.03 Score=50.51 Aligned_cols=93 Identities=10% Similarity=0.142 Sum_probs=57.6
Q ss_pred CEEEEeccCCChhhHH-HHHhhcCCCcEEEEEeC--ChHHHHHHHHHHHhcCCCC-------CCeEEEEccccchhhcCC
Q 042119 132 KKVAFVGSGPMPLTSI-IMAKHHLTSTHFDNFDI--DEAANDVARSIVASDAEFE-------GRMKFLTRDIMEVKEQLG 201 (286)
Q Consensus 132 ~~VL~IG~G~lp~tai-~lA~~~~~g~~V~~iDi--d~~ai~~Ar~~~~~~g~l~-------~~i~f~~~D~~~~~~~l~ 201 (286)
++|.+||+|.+|.... .|++ .|.+|+.+|+ +++.++..++ .| .. .+++.. +..+......
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~---~g~~V~~~~r~~~~~~~~~~~~----~~-~~~~~g~~~~~~~~~--~~~~~~~~~~ 70 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVD---NGNEVRIWGTEFDTEILKSISA----GR-EHPRLGVKLNGVEIF--WPEQLEKCLE 70 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHH---HCCEEEEECCGGGHHHHHHHHT----TC-CBTTTTBCCCSEEEE--CGGGHHHHHT
T ss_pred CEEEEECcCHHHHHHHHHHHh---CCCeEEEEEccCCHHHHHHHHH----hC-cCcccCccccceEEe--cHHhHHHHHh
Confidence 4799999998876533 3444 5789999999 8887654433 33 10 112221 1101222235
Q ss_pred CcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEe
Q 042119 202 EYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVR 239 (286)
Q Consensus 202 ~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r 239 (286)
.+|+|+++.-- .....+++.+.+ ++||.+++.-
T Consensus 71 ~~D~vi~~v~~----~~~~~v~~~i~~-l~~~~~vv~~ 103 (335)
T 1txg_A 71 NAEVVLLGVST----DGVLPVMSRILP-YLKDQYIVLI 103 (335)
T ss_dssp TCSEEEECSCG----GGHHHHHHHHTT-TCCSCEEEEC
T ss_pred cCCEEEEcCCh----HHHHHHHHHHhc-CCCCCEEEEE
Confidence 78999986432 355678888988 8888766543
No 484
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=95.10 E-value=0.039 Score=49.17 Aligned_cols=90 Identities=20% Similarity=0.232 Sum_probs=57.1
Q ss_pred CCEEEEeccCCChhhHHH-HHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeehh
Q 042119 131 PKKVAFVGSGPMPLTSII-MAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFLA 209 (286)
Q Consensus 131 ~~~VL~IG~G~lp~tai~-lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~a 209 (286)
..+|.+||+|.+|..-.. +++ .|.+|+.+|++++..+..++ .| +.. ..|..+. +...|+|+++
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~---~g~~V~~~~~~~~~~~~~~~----~g-----~~~-~~~~~~~---~~~~D~vi~~ 67 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLK---EGVTVYAFDLMEANVAAVVA----QG-----AQA-CENNQKV---AAASDIIFTS 67 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHH---TTCEEEEECSSHHHHHHHHT----TT-----CEE-CSSHHHH---HHHCSEEEEC
T ss_pred CCEEEEECccHHHHHHHHHHHH---CCCeEEEEeCCHHHHHHHHH----CC-----Cee-cCCHHHH---HhCCCEEEEE
Confidence 479999999998875433 333 57899999999987664432 25 222 2333232 2358999987
Q ss_pred hhccCChhHHHHHHH---HHHhhccCCcEEEEe
Q 042119 210 ALVGMSKEEKLTILG---HIRKYMKDGGILLVR 239 (286)
Q Consensus 210 alvg~~~~~k~~vl~---~l~~~l~pgg~lv~r 239 (286)
.-. ...-..++. .+.+.++||.+++.-
T Consensus 68 vp~---~~~~~~v~~~~~~l~~~l~~~~~vv~~ 97 (301)
T 3cky_A 68 LPN---AGIVETVMNGPGGVLSACKAGTVIVDM 97 (301)
T ss_dssp CSS---HHHHHHHHHSTTCHHHHSCTTCEEEEC
T ss_pred CCC---HHHHHHHHcCcchHhhcCCCCCEEEEC
Confidence 422 122345554 677888888876653
No 485
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=95.09 E-value=0.057 Score=52.36 Aligned_cols=76 Identities=17% Similarity=0.288 Sum_probs=49.0
Q ss_pred CCEEEEeccCCChhhHH--HHHhh--cCCCcEEEEEeCChHHHHHHHHHHHh----cCCCCCCeEEEE-ccccchhhcCC
Q 042119 131 PKKVAFVGSGPMPLTSI--IMAKH--HLTSTHFDNFDIDEAANDVARSIVAS----DAEFEGRMKFLT-RDIMEVKEQLG 201 (286)
Q Consensus 131 ~~~VL~IG~G~lp~tai--~lA~~--~~~g~~V~~iDid~~ai~~Ar~~~~~----~g~l~~~i~f~~-~D~~~~~~~l~ 201 (286)
..+|..||+|....+++ .|+++ .+++.+|+-+|++++.++......+. .+ ...++.. .|. ...+.
T Consensus 28 ~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~~~~~~~l~~~~---~~~~I~~t~D~---~eal~ 101 (472)
T 1u8x_X 28 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKA---PDIEFAATTDP---EEAFT 101 (472)
T ss_dssp CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHC---TTSEEEEESCH---HHHHS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHHHHHHHHhccCC---CCCEEEEECCH---HHHHc
Confidence 45999999998633323 46653 23478899999999987765544432 34 2344443 453 23456
Q ss_pred Ccceeehhhhc
Q 042119 202 EYDCIFLAALV 212 (286)
Q Consensus 202 ~fD~V~~aalv 212 (286)
+.|+|++++-+
T Consensus 102 ~AD~VViaag~ 112 (472)
T 1u8x_X 102 DVDFVMAHIRV 112 (472)
T ss_dssp SCSEEEECCCT
T ss_pred CCCEEEEcCCC
Confidence 78999988754
No 486
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=95.09 E-value=0.033 Score=53.92 Aligned_cols=96 Identities=14% Similarity=0.119 Sum_probs=61.8
Q ss_pred CEEEEeccCCChhhHH-HHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeehhh
Q 042119 132 KKVAFVGSGPMPLTSI-IMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFLAA 210 (286)
Q Consensus 132 ~~VL~IG~G~lp~tai-~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~aa 210 (286)
++|.+||+|.+|.... .|++ .|.+|+++|++++.++...+. +..| ..+. .+.|..++...+...|+|+++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~---~G~~V~v~dr~~~~~~~l~~~-~~~g---~gi~-~~~~~~e~v~~l~~aDvVilaV 74 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMND---HGFVVCAFNRTVSKVDDFLAN-EAKG---TKVL-GAHSLEEMVSKLKKPRRIILLV 74 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHH---TTCCEEEECSSTHHHHHHHHT-TTTT---SSCE-ECSSHHHHHHHBCSSCEEEECS
T ss_pred CeEEEEChHHHHHHHHHHHHH---CCCeEEEEeCCHHHHHHHHhc-cccC---CCeE-EeCCHHHHHhhccCCCEEEEeC
Confidence 5799999998887533 3444 678999999999887655441 0011 2233 2345444433345789999763
Q ss_pred hccCChhHHHHHHHHHHhhccCCcEEEE
Q 042119 211 LVGMSKEEKLTILGHIRKYMKDGGILLV 238 (286)
Q Consensus 211 lvg~~~~~k~~vl~~l~~~l~pgg~lv~ 238 (286)
-- ...-..+++.+.+.++||.+|+-
T Consensus 75 p~---~~~v~~vl~~l~~~l~~g~iII~ 99 (482)
T 2pgd_A 75 KA---GQAVDNFIEKLVPLLDIGDIIID 99 (482)
T ss_dssp CT---THHHHHHHHHHHHHCCTTCEEEE
T ss_pred CC---hHHHHHHHHHHHhhcCCCCEEEE
Confidence 21 12345688899999999886664
No 487
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=95.05 E-value=0.017 Score=66.31 Aligned_cols=102 Identities=12% Similarity=0.027 Sum_probs=70.4
Q ss_pred cCCCCCCEEEEec-cCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCe-EEEEccccc-hhhcC--
Q 042119 126 NGVVQPKKVAFVG-SGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRM-KFLTRDIME-VKEQL-- 200 (286)
Q Consensus 126 ~~~~~~~~VL~IG-~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i-~f~~~D~~~-~~~~l-- 200 (286)
..++++++||..| +|++|+.++.+|+. .|++|++.+.+++..+.+++....+|. +.+ .....|..+ +....
T Consensus 1663 a~l~~Ge~VLI~gaaGgVG~aAiqlAk~--~Ga~Viat~~s~~k~~~l~~~~~~lga--~~v~~~~~~~~~~~i~~~t~g 1738 (2512)
T 2vz8_A 1663 GRMQPGESVLIHSGSGGVGQAAIAIALS--RGCRVFTTVGSAEKRAYLQARFPQLDE--TCFANSRDTSFEQHVLRHTAG 1738 (2512)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHCTTCCS--TTEEESSSSHHHHHHHHTTTS
T ss_pred hcCCCCCEEEEEeCChHHHHHHHHHHHH--cCCEEEEEeCChhhhHHHHhhcCCCCc--eEEecCCCHHHHHHHHHhcCC
Confidence 3468999999997 59999999999994 799999999999988887765433451 222 111111111 11111
Q ss_pred CCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEEe
Q 042119 201 GEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVR 239 (286)
Q Consensus 201 ~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r 239 (286)
.++|+|+.+. + . +.++...+.++|||+++.-
T Consensus 1739 ~GvDvVld~~--g---~---~~l~~~l~~L~~~Gr~V~i 1769 (2512)
T 2vz8_A 1739 KGVDLVLNSL--A---E---EKLQASVRCLAQHGRFLEI 1769 (2512)
T ss_dssp CCEEEEEECC--C---H---HHHHHHHTTEEEEEEEEEC
T ss_pred CCceEEEECC--C---c---hHHHHHHHhcCCCcEEEEe
Confidence 3699999642 2 1 4578889999999998874
No 488
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=95.05 E-value=0.18 Score=43.82 Aligned_cols=78 Identities=18% Similarity=0.141 Sum_probs=56.5
Q ss_pred CCCEEEEecc-C-CChhh-HHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhh--------
Q 042119 130 QPKKVAFVGS-G-PMPLT-SIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKE-------- 198 (286)
Q Consensus 130 ~~~~VL~IG~-G-~lp~t-ai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~-------- 198 (286)
.+++|+..|+ | .+|.. +..|++ .|++|+.+|.+++..+...+.++..+ ..++.++.+|+.+...
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~---~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~ 95 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALL---EGADVVISDYHERRLGETRDQLADLG--LGRVEAVVCDVTSTEAVDALITQT 95 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHH---TTCEEEEEESCHHHHHHHHHHHHTTC--SSCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHH---CCCEEEEecCCHHHHHHHHHHHHhcC--CCceEEEEeCCCCHHHHHHHHHHH
Confidence 5789999998 6 35543 334555 79999999999998888777776655 2689999999976321
Q ss_pred --cCCCcceeehhhhc
Q 042119 199 --QLGEYDCIFLAALV 212 (286)
Q Consensus 199 --~l~~fD~V~~aalv 212 (286)
.++..|+++..+.+
T Consensus 96 ~~~~g~id~li~~Ag~ 111 (266)
T 3o38_A 96 VEKAGRLDVLVNNAGL 111 (266)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHhCCCcEEEECCCc
Confidence 22468988866543
No 489
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=95.04 E-value=0.04 Score=48.26 Aligned_cols=104 Identities=13% Similarity=0.116 Sum_probs=61.2
Q ss_pred CCCEEEEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeehh
Q 042119 130 QPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFLA 209 (286)
Q Consensus 130 ~~~~VL~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~a 209 (286)
.+++||.||+|..+...+.... ..|+.|+.|+.+... ..+++.+ .| +++++..+-. +.++.++|+||.+
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll--~~GA~VtVvap~~~~--~l~~l~~-~~----~i~~i~~~~~--~~dL~~adLVIaA 98 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFL--QEGAAITVVAPTVSA--EINEWEA-KG----QLRVKRKKVG--EEDLLNVFFIVVA 98 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHG--GGCCCEEEECSSCCH--HHHHHHH-TT----SCEEECSCCC--GGGSSSCSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHH--HCCCEEEEECCCCCH--HHHHHHH-cC----CcEEEECCCC--HhHhCCCCEEEEC
Confidence 5789999999987766554433 268999999876431 1233332 23 5788876653 4567789999965
Q ss_pred hhccCChhHHHHHHHHHHhhccCCcEEEEeec-CcceeeecccC
Q 042119 210 ALVGMSKEEKLTILGHIRKYMKDGGILLVRSA-KGARAFLYPVV 252 (286)
Q Consensus 210 alvg~~~~~k~~vl~~l~~~l~pgg~lv~r~~-~g~r~~lyp~v 252 (286)
.-. .+ +=..+....+ -|+++-+-. .....|..|.+
T Consensus 99 T~d---~~----~N~~I~~~ak-~gi~VNvvD~p~~~~f~~Pai 134 (223)
T 3dfz_A 99 TND---QA----VNKFVKQHIK-NDQLVNMASSFSDGNIQIPAQ 134 (223)
T ss_dssp CCC---TH----HHHHHHHHSC-TTCEEEC-----CCSEECCEE
T ss_pred CCC---HH----HHHHHHHHHh-CCCEEEEeCCcccCeEEEeeE
Confidence 321 12 2233444444 566655532 33456888854
No 490
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=95.02 E-value=0.051 Score=49.29 Aligned_cols=90 Identities=18% Similarity=0.256 Sum_probs=58.0
Q ss_pred CCEEEEeccCCChhhHH-HHHhhcCCCc-EEEEEeCC--hHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCccee
Q 042119 131 PKKVAFVGSGPMPLTSI-IMAKHHLTST-HFDNFDID--EAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCI 206 (286)
Q Consensus 131 ~~~VL~IG~G~lp~tai-~lA~~~~~g~-~V~~iDid--~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V 206 (286)
.++|.+||+|.+|.... .|++ .|. +|+++|++ ++..+.++ ..| +.+ +.+..+. ....|+|
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~---~G~~~V~~~dr~~~~~~~~~~~----~~g-----~~~-~~~~~e~---~~~aDvV 87 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQ---AGAIDMAAYDAASAESWRPRAE----ELG-----VSC-KASVAEV---AGECDVI 87 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHH---HSCCEEEEECSSCHHHHHHHHH----HTT-----CEE-CSCHHHH---HHHCSEE
T ss_pred CCEEEEECccHHHHHHHHHHHH---CCCCeEEEEcCCCCHHHHHHHH----HCC-----CEE-eCCHHHH---HhcCCEE
Confidence 46999999998886532 3444 467 99999997 46555443 345 222 2333332 2357999
Q ss_pred ehhhhccCChhHHHHHHHHHHhhccCCcEEEEee
Q 042119 207 FLAALVGMSKEEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 207 ~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
|++.-- ..-.++++.+.+.+++|.+++-.+
T Consensus 88 i~~vp~----~~~~~~~~~l~~~l~~~~ivvd~s 117 (312)
T 3qsg_A 88 FSLVTA----QAALEVAQQAGPHLCEGALYADFT 117 (312)
T ss_dssp EECSCT----TTHHHHHHHHGGGCCTTCEEEECC
T ss_pred EEecCc----hhHHHHHHhhHhhcCCCCEEEEcC
Confidence 976432 233457899999999998877543
No 491
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=95.00 E-value=0.031 Score=51.53 Aligned_cols=96 Identities=15% Similarity=0.203 Sum_probs=58.8
Q ss_pred EEEEeccCCChhhHHH-HHhhcCCCcEEEEEeCChHHHHHHHHHHHh---c-CC-CCCCeEEEEccccchhhcCCCccee
Q 042119 133 KVAFVGSGPMPLTSII-MAKHHLTSTHFDNFDIDEAANDVARSIVAS---D-AE-FEGRMKFLTRDIMEVKEQLGEYDCI 206 (286)
Q Consensus 133 ~VL~IG~G~lp~tai~-lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~---~-g~-l~~~i~f~~~D~~~~~~~l~~fD~V 206 (286)
+|.+||+|.+|..... |++ .|.+|+.+|++++.++..++.-.. . |. +..++.+ +.|..+ ....+|+|
T Consensus 17 kI~iIG~G~mG~~la~~L~~---~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~aDvV 89 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSK---KCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITF-TSDVEK---AYNGAEII 89 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTT---TEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEE-ESCHHH---HHTTCSSE
T ss_pred eEEEECCCHHHHHHHHHHHh---CCCEEEEEECCHHHHHHHHHcCcccccccccccccceee-eCCHHH---HHcCCCEE
Confidence 8999999988765322 333 578999999999887665543100 0 10 0112332 233322 23478999
Q ss_pred ehhhhccCChhHHHHHHHH----HHhhccC-CcEEEEe
Q 042119 207 FLAALVGMSKEEKLTILGH----IRKYMKD-GGILLVR 239 (286)
Q Consensus 207 ~~aalvg~~~~~k~~vl~~----l~~~l~p-gg~lv~r 239 (286)
|++.- .....+++.. +...++| |.+++.-
T Consensus 90 ilav~----~~~~~~v~~~~~~gl~~~l~~~~~ivv~~ 123 (366)
T 1evy_A 90 LFVIP----TQFLRGFFEKSGGNLIAYAKEKQVPVLVC 123 (366)
T ss_dssp EECCC----HHHHHHHHHHHCHHHHHHHHHHTCCEEEC
T ss_pred EECCC----hHHHHHHHHHhHHHHHHhcCccCCEEEEE
Confidence 97732 2455678888 8888888 7765543
No 492
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=94.98 E-value=0.049 Score=49.60 Aligned_cols=88 Identities=20% Similarity=0.235 Sum_probs=58.1
Q ss_pred CCEEEEeccCCChhhHH-HHHhhcCCC----cEEEEEeCChH--HHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCc
Q 042119 131 PKKVAFVGSGPMPLTSI-IMAKHHLTS----THFDNFDIDEA--ANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEY 203 (286)
Q Consensus 131 ~~~VL~IG~G~lp~tai-~lA~~~~~g----~~V~~iDid~~--ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~f 203 (286)
.++|.+||+|.+|..-. .|++ .| .+|+.+|++++ ..+..+ ..| +++ +.|..+. ....
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~---~G~~~~~~V~v~~r~~~~~~~~~l~----~~G-----~~~-~~~~~e~---~~~a 85 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTA---AGVLAAHKIMASSPDMDLATVSALR----KMG-----VKL-TPHNKET---VQHS 85 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHH---TTSSCGGGEEEECSCTTSHHHHHHH----HHT-----CEE-ESCHHHH---HHHC
T ss_pred CCEEEEECCCHHHHHHHHHHHH---CCCCCcceEEEECCCccHHHHHHHH----HcC-----CEE-eCChHHH---hccC
Confidence 46899999998876533 2333 45 68999999985 544443 346 232 2343222 2368
Q ss_pred ceeehhhhccCChhHHHHHHHHHHhhccCCcEEEE
Q 042119 204 DCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLV 238 (286)
Q Consensus 204 D~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~ 238 (286)
|+||++.- .....++++.+.+.++||.+++-
T Consensus 86 DvVilav~----~~~~~~vl~~l~~~l~~~~ivvs 116 (322)
T 2izz_A 86 DVLFLAVK----PHIIPFILDEIGADIEDRHIVVS 116 (322)
T ss_dssp SEEEECSC----GGGHHHHHHHHGGGCCTTCEEEE
T ss_pred CEEEEEeC----HHHHHHHHHHHHhhcCCCCEEEE
Confidence 99998743 25667888999888888876554
No 493
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=94.95 E-value=0.015 Score=52.92 Aligned_cols=93 Identities=13% Similarity=0.095 Sum_probs=63.9
Q ss_pred EEeccCCChhhHHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhc----CCCcceeehhh
Q 042119 135 AFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQ----LGEYDCIFLAA 210 (286)
Q Consensus 135 L~IG~G~lp~tai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~----l~~fD~V~~aa 210 (286)
++-|||.+++-+ .+ .+.+++.+|.++++.+.-+++++. .++++++.+|+...... -..||+||++-
T Consensus 98 lfaGSGaLgiEa---LS---~~d~~vfvE~~~~a~~~L~~Nl~~----~~~~~V~~~D~~~~L~~l~~~~~~fdLVfiDP 167 (283)
T 2oo3_A 98 YYPGSPYFAINQ---LR---SQDRLYLCELHPTEYNFLLKLPHF----NKKVYVNHTDGVSKLNALLPPPEKRGLIFIDP 167 (283)
T ss_dssp EEECHHHHHHHH---SC---TTSEEEEECCSHHHHHHHTTSCCT----TSCEEEECSCHHHHHHHHCSCTTSCEEEEECC
T ss_pred EeCCcHHHHHHH---cC---CCCeEEEEeCCHHHHHHHHHHhCc----CCcEEEEeCcHHHHHHHhcCCCCCccEEEECC
Confidence 677887554432 22 568999999999999999988764 36899999998764432 12599999985
Q ss_pred hccCChhHHHHHHHHHHh--hccCCcEEEE
Q 042119 211 LVGMSKEEKLTILGHIRK--YMKDGGILLV 238 (286)
Q Consensus 211 lvg~~~~~k~~vl~~l~~--~l~pgg~lv~ 238 (286)
--+. +.+..++++.+.+ ...|+|++++
T Consensus 168 PYe~-k~~~~~vl~~L~~~~~r~~~Gi~v~ 196 (283)
T 2oo3_A 168 SYER-KEEYKEIPYAIKNAYSKFSTGLYCV 196 (283)
T ss_dssp CCCS-TTHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred CCCC-CcHHHHHHHHHHHhCccCCCeEEEE
Confidence 3221 2355666766665 3456776665
No 494
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=94.93 E-value=0.16 Score=46.37 Aligned_cols=102 Identities=19% Similarity=0.257 Sum_probs=58.4
Q ss_pred CEEEEecc-CCChhhHHHHHhhcCCC--cEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeeh
Q 042119 132 KKVAFVGS-GPMPLTSIIMAKHHLTS--THFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFL 208 (286)
Q Consensus 132 ~~VL~IG~-G~lp~tai~lA~~~~~g--~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~ 208 (286)
.||+.||+ |..|.+...... ..+ .+++.+|+++ +-..+..+.+... ..++++..+. .+....+.+.|+||+
T Consensus 1 mKI~IiGa~G~VG~~la~~L~--~~~~~~ev~L~Di~~-~~~~a~dL~~~~~--~~~l~~~~~t-~d~~~a~~~aDvVvi 74 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLK--NSPLVSRLTLYDIAH-TPGVAADLSHIET--RATVKGYLGP-EQLPDCLKGCDVVVI 74 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHH--TCTTCSEEEEEESSS-HHHHHHHHTTSSS--SCEEEEEESG-GGHHHHHTTCSEEEE
T ss_pred CEEEEECCCChHHHHHHHHHH--hCCCCcEEEEEeCCc-cHHHHHHHhccCc--CceEEEecCC-CCHHHHhCCCCEEEE
Confidence 48999998 999988665543 244 6899999998 4444444422211 1234444331 122233568899998
Q ss_pred hhhc----cCChh--------HHHHHHHHHHhhccCCcEEEEee
Q 042119 209 AALV----GMSKE--------EKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 209 aalv----g~~~~--------~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
++.+ |++.. --.++.+.+.+. .|++.+++-+
T Consensus 75 ~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~s 117 (314)
T 1mld_A 75 PAGVPRKPGMTRDDLFNTNATIVATLTAACAQH-CPDAMICIIS 117 (314)
T ss_dssp CCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH-CTTSEEEECS
T ss_pred CCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEEC
Confidence 8754 22211 122334444444 5889888854
No 495
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=94.92 E-value=0.039 Score=47.14 Aligned_cols=69 Identities=12% Similarity=0.142 Sum_probs=45.1
Q ss_pred CCCEEEEeccCCChhhHHH-HHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeeh
Q 042119 130 QPKKVAFVGSGPMPLTSII-MAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFL 208 (286)
Q Consensus 130 ~~~~VL~IG~G~lp~tai~-lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~ 208 (286)
..++|.+||+|.+|.+... |++ .|.+|+.+|++++ ...+.|+|++
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~~---~g~~V~~~~~~~~-------------------------------~~~~aD~vi~ 63 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFEI---AGHEVTYYGSKDQ-------------------------------ATTLGEIVIM 63 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHHH---TTCEEEEECTTCC-------------------------------CSSCCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHH---CCCEEEEEcCCHH-------------------------------HhccCCEEEE
Confidence 3579999999988866433 333 6789999999876 2245688776
Q ss_pred hhhccCChhHHHHHHHHHHhhccCCcEEE
Q 042119 209 AALVGMSKEEKLTILGHIRKYMKDGGILL 237 (286)
Q Consensus 209 aalvg~~~~~k~~vl~~l~~~l~pgg~lv 237 (286)
+.- ...-.++++.+.+.++ |.+++
T Consensus 64 av~----~~~~~~v~~~l~~~~~-~~~vi 87 (209)
T 2raf_A 64 AVP----YPALAALAKQYATQLK-GKIVV 87 (209)
T ss_dssp CSC----HHHHHHHHHHTHHHHT-TSEEE
T ss_pred cCC----cHHHHHHHHHHHHhcC-CCEEE
Confidence 532 2344567777777776 54443
No 496
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=94.90 E-value=0.038 Score=50.20 Aligned_cols=99 Identities=16% Similarity=0.228 Sum_probs=57.1
Q ss_pred CEEEEeccCCChhhHHH-HHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCC-----CCCCeEEEEccccchhhcCC-Ccc
Q 042119 132 KKVAFVGSGPMPLTSII-MAKHHLTSTHFDNFDIDEAANDVARSIVASDAE-----FEGRMKFLTRDIMEVKEQLG-EYD 204 (286)
Q Consensus 132 ~~VL~IG~G~lp~tai~-lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~-----l~~~i~f~~~D~~~~~~~l~-~fD 204 (286)
++|+.||+|.+|..... |++ .|.+|+.+|.++. + .+++.|. .....++....+.+-+.+.. .+|
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~---~g~~V~~~~r~~~--~----~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~~D 73 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAK---TGHCVSVVSRSDY--E----TVKAKGIRIRSATLGDYTFRPAAVVRSAAELETKPD 73 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHH---TTCEEEEECSTTH--H----HHHHHCEEEEETTTCCEEECCSCEESCGGGCSSCCS
T ss_pred CEEEEECcCHHHHHHHHHHHh---CCCeEEEEeCChH--H----HHHhCCcEEeecCCCcEEEeeeeeECCHHHcCCCCC
Confidence 68999999988865333 344 6789999999872 2 2333341 01123321011111122333 799
Q ss_pred eeehhhhccCChhHHHHHHHHHHhhccCCcEEEEeecCcc
Q 042119 205 CIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRSAKGA 244 (286)
Q Consensus 205 ~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r~~~g~ 244 (286)
+|+++.= .. .-..+++.+.+.++|+..++.- .+|+
T Consensus 74 lVilavK-~~---~~~~~l~~l~~~l~~~t~Iv~~-~nGi 108 (320)
T 3i83_A 74 CTLLCIK-VV---EGADRVGLLRDAVAPDTGIVLI-SNGI 108 (320)
T ss_dssp EEEECCC-CC---TTCCHHHHHTTSCCTTCEEEEE-CSSS
T ss_pred EEEEecC-CC---ChHHHHHHHHhhcCCCCEEEEe-CCCC
Confidence 9998732 21 2225888999999998766543 3443
No 497
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=94.88 E-value=0.034 Score=54.19 Aligned_cols=99 Identities=11% Similarity=0.113 Sum_probs=64.4
Q ss_pred CCCEEEEeccCCChhhH-HHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhhcCCCcceeeh
Q 042119 130 QPKKVAFVGSGPMPLTS-IIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFL 208 (286)
Q Consensus 130 ~~~~VL~IG~G~lp~ta-i~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~~l~~fD~V~~ 208 (286)
-..+|.+||.|.+|... ..|++ .|.+|+++|++++.++...+. ..+ +..+.. +.|..++...+...|+||+
T Consensus 9 ~~~~IgvIGlG~MG~~lA~~La~---~G~~V~v~dr~~~~~~~l~~~--~~~--~~gi~~-~~s~~e~v~~l~~aDvVil 80 (497)
T 2p4q_A 9 MSADFGLIGLAVMGQNLILNAAD---HGFTVCAYNRTQSKVDHFLAN--EAK--GKSIIG-ATSIEDFISKLKRPRKVML 80 (497)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHH---TTCCEEEECSSSHHHHHHHHT--TTT--TSSEEC-CSSHHHHHHTSCSSCEEEE
T ss_pred CCCCEEEEeeHHHHHHHHHHHHH---CCCEEEEEeCCHHHHHHHHcc--ccc--CCCeEE-eCCHHHHHhcCCCCCEEEE
Confidence 34689999999988753 33444 688999999999887655441 111 012332 3454454444455899997
Q ss_pred hhhccCChhHHHHHHHHHHhhccCCcEEEEe
Q 042119 209 AALVGMSKEEKLTILGHIRKYMKDGGILLVR 239 (286)
Q Consensus 209 aalvg~~~~~k~~vl~~l~~~l~pgg~lv~r 239 (286)
+.--+ ..-.++++.+.+.++||.+|+--
T Consensus 81 ~Vp~~---~~v~~vl~~l~~~l~~g~iIId~ 108 (497)
T 2p4q_A 81 LVKAG---APVDALINQIVPLLEKGDIIIDG 108 (497)
T ss_dssp CCCSS---HHHHHHHHHHGGGCCTTCEEEEC
T ss_pred EcCCh---HHHHHHHHHHHHhCCCCCEEEEC
Confidence 64211 23456888999999998877653
No 498
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=94.87 E-value=0.26 Score=42.40 Aligned_cols=75 Identities=19% Similarity=0.248 Sum_probs=54.7
Q ss_pred CCCEEEEeccCCChhh---HHHHHhhcCCCcEEEEEeCChHHHHHHHHHHHhcCCCCCCeEEEEccccchhh--------
Q 042119 130 QPKKVAFVGSGPMPLT---SIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKE-------- 198 (286)
Q Consensus 130 ~~~~VL~IG~G~lp~t---ai~lA~~~~~g~~V~~iDid~~ai~~Ar~~~~~~g~l~~~i~f~~~D~~~~~~-------- 198 (286)
.+++||..|++ .|+. +..|++ .|++|+.+|.+++..+...+.+...+ .++.++.+|+.+...
T Consensus 8 ~~k~vlITGas-~giG~~~a~~l~~---~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~ 80 (253)
T 3qiv_A 8 ENKVGIVTGSG-GGIGQAYAEALAR---EGAAVVVADINAEAAEAVAKQIVADG---GTAISVAVDVSDPESAKAMADRT 80 (253)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHH---TTCEEEEEESCHHHHHHHHHHHHHTT---CEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHH---CCCEEEEEcCCHHHHHHHHHHHHhcC---CcEEEEEccCCCHHHHHHHHHHH
Confidence 46889999985 4543 333444 79999999999999888777777666 579999999986421
Q ss_pred --cCCCcceeehhhh
Q 042119 199 --QLGEYDCIFLAAL 211 (286)
Q Consensus 199 --~l~~fD~V~~aal 211 (286)
.++..|+++..+.
T Consensus 81 ~~~~g~id~li~~Ag 95 (253)
T 3qiv_A 81 LAEFGGIDYLVNNAA 95 (253)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 2247898886653
No 499
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=94.87 E-value=0.051 Score=50.11 Aligned_cols=101 Identities=25% Similarity=0.333 Sum_probs=60.0
Q ss_pred CCEEEEeccCCChhhHHHHHhhcCCCc-EEEEEeCChHHHH-HHHHHHHh---cCCCCCCeEEEEccccchhhcCCCcce
Q 042119 131 PKKVAFVGSGPMPLTSIIMAKHHLTST-HFDNFDIDEAAND-VARSIVAS---DAEFEGRMKFLTRDIMEVKEQLGEYDC 205 (286)
Q Consensus 131 ~~~VL~IG~G~lp~tai~lA~~~~~g~-~V~~iDid~~ai~-~Ar~~~~~---~g~l~~~i~f~~~D~~~~~~~l~~fD~ 205 (286)
..+|..||+|.+|.+...+... .|. +|+.+|++++.++ .+.++.+. .+ ...++.. +.|. .++.+.|+
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~--~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~-~~~~v~~-t~d~----~a~~~aDi 78 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGL--KELGDVVLFDIAEGTPQGKGLDIAESSPVDG-FDAKFTG-ANDY----AAIEGADV 78 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCCEEEEECSSSSHHHHHHHHHHHHHHHHT-CCCCEEE-ESSG----GGGTTCSE
T ss_pred CCEEEEECCCHHHHHHHHHHHh--CCCCeEEEEeCCchhHHHHHHHHhchhhhcC-CCCEEEE-eCCH----HHHCCCCE
Confidence 4699999999988875554332 344 9999999998654 34444332 22 1233332 3453 35568999
Q ss_pred eehhhhc----cCCh--------hHHHHHHHHHHhhccCCcEEEEee
Q 042119 206 IFLAALV----GMSK--------EEKLTILGHIRKYMKDGGILLVRS 240 (286)
Q Consensus 206 V~~aalv----g~~~--------~~k~~vl~~l~~~l~pgg~lv~r~ 240 (286)
|++++-+ ||+. +.-.++.+.+.+. .|++.+++-+
T Consensus 79 VIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~iivvt 124 (324)
T 3gvi_A 79 VIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKY-APEAFVICIT 124 (324)
T ss_dssp EEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHH-CTTCEEEECC
T ss_pred EEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHH-CCCeEEEecC
Confidence 9987643 2221 1123444555555 5899888754
No 500
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=94.86 E-value=0.028 Score=52.64 Aligned_cols=95 Identities=18% Similarity=0.163 Sum_probs=58.7
Q ss_pred CEEEEeccCCChhhHHH-HHhhcCCCcEEEEEe---CChHHHHHHHHHHHhcCC------CCC-------CeEEEEcccc
Q 042119 132 KKVAFVGSGPMPLTSII-MAKHHLTSTHFDNFD---IDEAANDVARSIVASDAE------FEG-------RMKFLTRDIM 194 (286)
Q Consensus 132 ~~VL~IG~G~lp~tai~-lA~~~~~g~~V~~iD---id~~ai~~Ar~~~~~~g~------l~~-------~i~f~~~D~~ 194 (286)
++|++||+|.+|..... |++ ..|.+|+.+| .+++.++.+. +..|. ... ++...+.|..
T Consensus 3 mkI~ViGaG~~G~~~a~~La~--~~G~~V~~~~~~~r~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAAS--RDGVEVRVLTLFADEAERWTKAL---GADELTVIVNEKDGTQTEVKSRPKVITKDPE 77 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTT--STTEEEEEECCSTTHHHHHHHHH---TTSCEEEEEECSSSCEEEEEECCSEEESCHH
T ss_pred ceEEEECCCHHHHHHHHHHHh--CCCCEEEEEeCCCCcHHHHHHHH---hhccceeeeecCCCccceeeccceEEeCCHH
Confidence 58999999988765433 222 1488999999 7777665432 22220 000 1111222322
Q ss_pred chhhcCCCcceeehhhhccCChhHHHHHHHHHHhhccCCcEEEE
Q 042119 195 EVKEQLGEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLV 238 (286)
Q Consensus 195 ~~~~~l~~fD~V~~aalvg~~~~~k~~vl~~l~~~l~pgg~lv~ 238 (286)
.....+|+|+++.- ......+++.+.+.++|+.+|+.
T Consensus 78 ---~a~~~aD~Vilav~----~~~~~~v~~~l~~~l~~~~ivv~ 114 (404)
T 3c7a_A 78 ---IAISGADVVILTVP----AFAHEGYFQAMAPYVQDSALIVG 114 (404)
T ss_dssp ---HHHTTCSEEEECSC----GGGHHHHHHHHTTTCCTTCEEEE
T ss_pred ---HHhCCCCEEEEeCc----hHHHHHHHHHHHhhCCCCcEEEE
Confidence 22357999998742 24567899999999999877665
Done!