Query 042123
Match_columns 849
No_of_seqs 743 out of 5680
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 04:44:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042123.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042123hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 1.7E-63 5.9E-68 599.5 33.6 510 1-514 47-752 (768)
2 3rgz_A Protein brassinosteroid 100.0 3.8E-57 1.3E-61 544.2 26.6 464 7-481 202-744 (768)
3 3t6q_A CD180 antigen; protein- 100.0 4E-55 1.4E-59 515.1 36.0 468 6-482 34-565 (606)
4 3t6q_A CD180 antigen; protein- 100.0 5.1E-54 1.7E-58 505.6 32.6 482 9-502 16-562 (606)
5 1ziw_A TOLL-like receptor 3; i 100.0 1.2E-53 4.1E-58 509.3 35.8 490 6-502 26-624 (680)
6 1ziw_A TOLL-like receptor 3; i 100.0 5.5E-53 1.9E-57 503.6 33.4 470 6-482 50-627 (680)
7 3vq2_A TLR4, TOLL-like recepto 100.0 7.3E-53 2.5E-57 495.8 31.4 461 6-483 33-564 (606)
8 3j0a_A TOLL-like receptor 5; m 100.0 7.9E-52 2.7E-56 503.1 36.9 460 1-482 2-565 (844)
9 3j0a_A TOLL-like receptor 5; m 100.0 2.9E-52 1E-56 506.9 32.0 436 6-457 25-564 (844)
10 3vq2_A TLR4, TOLL-like recepto 100.0 9.3E-52 3.2E-56 486.4 31.2 475 9-503 15-561 (606)
11 2z63_A TOLL-like receptor 4, v 100.0 9.4E-52 3.2E-56 482.9 29.6 458 9-484 11-538 (570)
12 4eco_A Uncharacterized protein 100.0 1.1E-51 3.8E-56 485.3 17.6 449 1-481 77-604 (636)
13 2z81_A CD282 antigen, TOLL-lik 100.0 4.5E-50 1.5E-54 466.3 23.0 458 1-482 4-515 (549)
14 4ecn_A Leucine-rich repeat pro 100.0 3.8E-49 1.3E-53 470.3 25.7 445 1-478 319-841 (876)
15 2z7x_B TOLL-like receptor 1, v 100.0 2.6E-49 8.9E-54 456.4 17.8 451 9-482 4-486 (520)
16 2z63_A TOLL-like receptor 4, v 100.0 1.1E-47 3.8E-52 448.4 28.4 438 6-458 29-536 (570)
17 4ecn_A Leucine-rich repeat pro 100.0 7.2E-47 2.5E-51 450.7 23.9 440 30-499 323-839 (876)
18 4gt4_A Tyrosine-protein kinase 100.0 2.4E-47 8.2E-52 402.6 15.4 244 588-848 26-302 (308)
19 3omv_A RAF proto-oncogene seri 100.0 1.3E-46 4.6E-51 394.8 18.9 246 587-848 35-296 (307)
20 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 7.7E-47 2.6E-51 439.5 18.8 453 8-483 34-516 (562)
21 4g8a_A TOLL-like receptor 4; l 100.0 7.3E-46 2.5E-50 439.1 27.4 460 10-482 36-585 (635)
22 4asz_A BDNF/NT-3 growth factor 100.0 3.4E-47 1.2E-51 399.7 14.1 243 588-848 13-285 (299)
23 4aoj_A High affinity nerve gro 100.0 1.5E-46 5.2E-51 400.4 19.1 242 588-848 41-315 (329)
24 4fih_A Serine/threonine-protei 100.0 7.2E-47 2.5E-51 401.6 15.2 239 588-846 74-324 (346)
25 4b9d_A Serine/threonine-protei 100.0 8.5E-47 2.9E-51 401.7 14.4 242 588-846 24-277 (350)
26 4eco_A Uncharacterized protein 100.0 1.3E-46 4.5E-51 442.2 17.1 448 30-503 81-603 (636)
27 2z81_A CD282 antigen, TOLL-lik 100.0 6.8E-46 2.3E-50 431.1 20.0 452 32-501 7-511 (549)
28 2z7x_B TOLL-like receptor 1, v 100.0 3.2E-45 1.1E-49 422.3 21.6 446 33-501 3-482 (520)
29 4fie_A Serine/threonine-protei 100.0 1E-45 3.5E-50 402.5 15.8 239 588-846 151-401 (423)
30 4aw0_A HPDK1, 3-phosphoinositi 100.0 8.1E-46 2.8E-50 387.5 13.7 238 588-844 32-283 (311)
31 4ase_A Vascular endothelial gr 100.0 8.7E-46 3E-50 397.6 13.9 251 581-848 57-343 (353)
32 4g3f_A NF-kappa-beta-inducing 100.0 3E-46 1E-50 395.8 9.4 243 588-848 58-312 (336)
33 3hyh_A Carbon catabolite-derep 100.0 6.2E-45 2.1E-49 375.9 17.8 238 588-846 13-263 (275)
34 3ubd_A Ribosomal protein S6 ki 100.0 1.6E-45 5.5E-50 385.6 12.9 239 588-846 24-282 (304)
35 3hmm_A TGF-beta receptor type- 100.0 6.5E-45 2.2E-49 385.4 17.8 250 588-848 3-293 (303)
36 3fpq_A Serine/threonine-protei 100.0 9.1E-45 3.1E-49 378.2 17.9 238 591-846 29-283 (290)
37 3v47_A TOLL-like receptor 5B a 100.0 3.7E-43 1.3E-47 398.1 26.2 383 56-484 12-415 (455)
38 3v47_A TOLL-like receptor 5B a 100.0 7E-43 2.4E-47 395.8 26.2 380 10-412 15-412 (455)
39 4g31_A Eukaryotic translation 100.0 2.6E-43 9E-48 371.0 15.9 240 588-846 5-280 (299)
40 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 2.7E-42 9.4E-47 401.1 22.4 450 27-501 28-511 (562)
41 4g8a_A TOLL-like receptor 4; l 100.0 1E-40 3.5E-45 394.9 29.1 436 6-454 53-581 (635)
42 4f9c_A Cell division cycle 7-r 100.0 2.5E-41 8.5E-46 365.9 15.4 186 585-785 18-249 (361)
43 4b99_A Mitogen-activated prote 100.0 2.5E-40 8.5E-45 361.7 20.5 250 588-846 54-345 (398)
44 1jl5_A Outer protein YOPM; leu 100.0 5.9E-40 2E-44 368.6 23.7 344 7-409 13-371 (454)
45 2id5_A Lingo-1, leucine rich r 100.0 9.2E-40 3.1E-44 372.3 22.5 324 88-482 15-338 (477)
46 3v5w_A G-protein coupled recep 100.0 2.3E-40 7.7E-45 376.1 16.4 242 588-846 189-450 (689)
47 1jl5_A Outer protein YOPM; leu 100.0 4.4E-39 1.5E-43 361.5 23.9 387 29-482 10-416 (454)
48 3uto_A Twitchin; kinase, muscl 100.0 1.3E-39 4.3E-44 374.2 18.5 241 588-846 157-411 (573)
49 1o6v_A Internalin A; bacterial 100.0 2E-38 6.9E-43 359.5 27.2 350 27-414 43-393 (466)
50 1o6v_A Internalin A; bacterial 100.0 4.2E-38 1.4E-42 356.9 25.7 348 51-479 43-390 (466)
51 3uim_A Brassinosteroid insensi 100.0 1.6E-38 5.4E-43 343.1 20.2 268 576-848 18-307 (326)
52 3bz5_A Internalin-J, INLJ; leu 100.0 9.6E-38 3.3E-42 350.9 26.4 356 25-483 37-393 (457)
53 2id5_A Lingo-1, leucine rich r 100.0 1.4E-37 4.8E-42 354.2 26.0 321 33-385 14-334 (477)
54 3fxz_A Serine/threonine-protei 100.0 2.5E-38 8.5E-43 336.2 17.1 239 588-846 20-270 (297)
55 2qkw_B Protein kinase; three-h 100.0 4.8E-38 1.6E-42 338.4 18.9 259 581-848 32-311 (321)
56 3o6n_A APL1; leucine-rich repe 100.0 1E-37 3.6E-42 345.4 21.5 334 83-503 44-377 (390)
57 3p86_A Serine/threonine-protei 100.0 2.6E-38 9E-43 337.8 15.5 246 585-848 34-294 (309)
58 2c30_A Serine/threonine-protei 100.0 1E-37 3.5E-42 335.3 19.6 251 576-846 23-295 (321)
59 2nru_A Interleukin-1 receptor- 100.0 6.9E-37 2.4E-41 327.3 24.4 264 577-848 14-302 (307)
60 3fe3_A MAP/microtubule affinit 100.0 1.4E-37 4.7E-42 334.5 18.3 239 587-846 14-265 (328)
61 1o6l_A RAC-beta serine/threoni 100.0 1.8E-37 6.3E-42 334.3 18.9 240 588-846 5-261 (337)
62 3oja_B Anopheles plasmodium-re 100.0 4E-37 1.4E-41 359.6 22.9 335 83-504 50-384 (597)
63 3bz5_A Internalin-J, INLJ; leu 100.0 2.1E-36 7.1E-41 340.0 27.7 345 6-416 43-395 (457)
64 3s95_A LIMK-1, LIM domain kina 100.0 7.3E-37 2.5E-41 327.5 22.1 243 588-848 10-278 (310)
65 3txo_A PKC-L, NPKC-ETA, protei 100.0 7E-38 2.4E-42 339.9 14.1 242 586-846 21-281 (353)
66 4dc2_A Protein kinase C IOTA t 100.0 1.8E-37 6E-42 340.4 17.4 250 587-846 51-319 (396)
67 3zgw_A Maternal embryonic leuc 100.0 2.3E-37 8E-42 334.4 18.0 239 587-846 9-261 (347)
68 2yab_A Death-associated protei 100.0 4E-37 1.4E-41 334.7 19.6 245 587-846 11-273 (361)
69 2psq_A Fibroblast growth facto 100.0 7.3E-37 2.5E-41 335.0 20.3 244 588-848 81-360 (370)
70 3soa_A Calcium/calmodulin-depe 100.0 4.9E-37 1.7E-41 342.9 19.1 245 586-846 9-268 (444)
71 3q4u_A Activin receptor type-1 100.0 1.5E-37 5.1E-42 331.5 13.5 249 587-848 7-298 (301)
72 1tki_A Titin; serine kinase, m 100.0 4.3E-37 1.5E-41 330.2 16.9 241 587-846 4-258 (321)
73 1xjd_A Protein kinase C, theta 100.0 1.7E-37 5.7E-42 335.5 13.9 243 585-846 14-270 (345)
74 3a8x_A Protein kinase C IOTA t 100.0 8.4E-37 2.9E-41 330.8 19.2 248 588-846 9-276 (345)
75 3c0i_A Peripheral plasma membr 100.0 3E-37 1E-41 335.9 15.5 248 587-846 23-287 (351)
76 2i0e_A Protein kinase C-beta I 100.0 4.2E-37 1.4E-41 333.5 16.3 242 586-846 18-277 (353)
77 4euu_A Serine/threonine-protei 100.0 1.5E-36 5.3E-41 326.3 20.5 253 588-847 9-304 (319)
78 2y0a_A Death-associated protei 100.0 1E-36 3.5E-41 328.3 18.1 244 588-846 11-272 (326)
79 3kul_A Ephrin type-A receptor 100.0 1.2E-36 4.2E-41 327.5 18.5 241 588-848 49-309 (325)
80 3a62_A Ribosomal protein S6 ki 100.0 8.6E-37 2.9E-41 329.0 16.8 242 587-846 16-277 (327)
81 4eqm_A Protein kinase; transfe 100.0 6.2E-37 2.1E-41 325.1 15.3 246 588-848 11-271 (294)
82 3kn6_A Ribosomal protein S6 ki 100.0 1.9E-37 6.4E-42 333.7 11.2 246 593-846 16-271 (325)
83 2izr_A Casein kinase I isoform 100.0 5.2E-37 1.8E-41 331.7 14.6 250 588-848 9-277 (330)
84 3sxs_A Cytoplasmic tyrosine-pr 100.0 1.4E-36 4.7E-41 318.1 17.2 240 587-848 7-260 (268)
85 2bdw_A Hypothetical protein K1 100.0 1.4E-36 4.9E-41 331.5 17.7 244 586-846 27-285 (362)
86 2r5t_A Serine/threonine-protei 100.0 8.9E-37 3.1E-41 333.3 16.1 235 588-841 38-285 (373)
87 1csn_A Casein kinase-1; phosph 100.0 1E-36 3.6E-41 324.4 16.2 250 588-848 10-279 (298)
88 3niz_A Rhodanese family protei 100.0 6.1E-36 2.1E-40 320.1 22.1 252 587-846 20-301 (311)
89 3soc_A Activin receptor type-2 100.0 1.1E-36 3.8E-41 327.6 16.3 252 587-848 23-314 (322)
90 3h4j_B AMPK kdaid, SNF1-like p 100.0 1.4E-36 4.9E-41 327.0 17.1 238 588-846 9-259 (336)
91 4hgt_A Casein kinase I isoform 100.0 1.9E-36 6.4E-41 322.1 17.4 252 586-848 7-276 (296)
92 2zv2_A Calcium/calmodulin-depe 100.0 1.5E-36 5.2E-41 323.1 16.7 240 588-846 13-293 (298)
93 2qr7_A Ribosomal protein S6 ki 100.0 2.6E-37 8.9E-42 334.3 11.0 248 586-846 20-278 (342)
94 3p1a_A MYT1 kinase, membrane-a 100.0 2.3E-36 8E-41 323.4 17.6 236 588-846 57-305 (311)
95 4hcu_A Tyrosine-protein kinase 100.0 1.4E-36 4.7E-41 318.3 15.3 239 588-848 10-262 (269)
96 2qol_A Ephrin receptor; recept 100.0 1.6E-36 5.5E-41 332.5 16.3 241 588-848 45-305 (373)
97 3cbl_A C-FES, proto-oncogene t 100.0 8.5E-37 2.9E-41 335.8 14.1 242 587-848 113-370 (377)
98 2w4o_A Calcium/calmodulin-depe 100.0 1.2E-36 4.2E-41 330.7 15.1 240 587-846 52-306 (349)
99 1fot_A TPK1 delta, CAMP-depend 100.0 3E-36 1E-40 322.6 17.9 237 588-846 6-259 (318)
100 3o6n_A APL1; leucine-rich repe 100.0 2.4E-35 8.2E-40 326.5 25.6 311 28-409 43-353 (390)
101 3dtc_A Mitogen-activated prote 100.0 9.2E-37 3.1E-41 320.1 13.5 243 587-848 6-269 (271)
102 1kob_A Twitchin; kinase, intra 100.0 3.9E-36 1.3E-40 330.0 18.7 241 588-846 51-305 (387)
103 3qd2_B Eukaryotic translation 100.0 2.6E-36 9E-41 326.7 17.1 241 587-846 5-326 (332)
104 1rdq_E PKA C-alpha, CAMP-depen 100.0 2.9E-36 1E-40 327.0 17.1 237 588-846 41-294 (350)
105 3uzp_A CKI-delta, CKID, casein 100.0 3.7E-36 1.3E-40 319.9 17.2 251 587-848 8-276 (296)
106 3tki_A Serine/threonine-protei 100.0 3.3E-36 1.1E-40 323.7 16.9 243 587-847 6-263 (323)
107 1nxk_A MAP kinase-activated pr 100.0 2.2E-36 7.4E-41 334.6 15.7 247 588-846 61-322 (400)
108 3gen_A Tyrosine-protein kinase 100.0 3.4E-36 1.2E-40 317.8 16.3 241 587-848 23-276 (283)
109 4ejn_A RAC-alpha serine/threon 100.0 1.9E-36 6.4E-41 340.9 15.1 241 587-846 147-405 (446)
110 3lb7_A RAF proto-oncogene seri 100.0 8E-36 2.7E-40 318.4 19.1 245 588-848 36-296 (307)
111 3v8s_A RHO-associated protein 100.0 4.9E-37 1.7E-41 338.9 9.9 247 581-846 62-330 (410)
112 3vhe_A Vascular endothelial gr 100.0 1.3E-36 4.5E-41 332.9 12.9 252 580-848 14-351 (359)
113 4fr4_A YANK1, serine/threonine 100.0 6.4E-36 2.2E-40 327.0 18.3 242 588-846 15-272 (384)
114 3cok_A Serine/threonine-protei 100.0 6.1E-36 2.1E-40 315.0 17.5 242 587-846 10-263 (278)
115 3o0g_A Cell division protein k 100.0 9.9E-36 3.4E-40 315.8 19.2 251 588-846 2-283 (292)
116 3mdy_A Bone morphogenetic prot 100.0 1E-35 3.5E-40 322.7 19.5 258 581-848 30-327 (337)
117 3pfq_A PKC-B, PKC-beta, protei 100.0 4.6E-36 1.6E-40 352.5 18.0 242 586-846 339-598 (674)
118 2x4f_A Myosin light chain kina 100.0 5.7E-36 1.9E-40 327.9 17.5 237 592-846 93-343 (373)
119 3tt0_A Basic fibroblast growth 100.0 8.1E-36 2.8E-40 328.8 18.7 244 587-848 68-348 (382)
120 2a2a_A Death-associated protei 100.0 8E-36 2.7E-40 321.0 18.0 245 587-846 11-273 (321)
121 3l9p_A Anaplastic lymphoma kin 100.0 3.1E-36 1.1E-40 329.8 15.0 244 588-848 71-341 (367)
122 1ob3_A PFPK5, cell division co 100.0 4E-36 1.4E-40 318.1 15.1 251 588-846 2-281 (288)
123 3lm5_A Serine/threonine-protei 100.0 3E-36 1E-40 325.0 14.1 255 577-846 17-288 (327)
124 2pmi_A Negative RE, cyclin-dep 100.0 1.3E-35 4.5E-40 318.5 18.9 253 587-846 4-294 (317)
125 2y94_A 5'-AMP-activated protei 100.0 1.2E-35 4.2E-40 333.6 19.4 239 588-846 16-267 (476)
126 4aw2_A Serine/threonine-protei 100.0 4.2E-36 1.4E-40 334.0 14.9 255 580-846 66-339 (437)
127 1qcf_A Haematopoetic cell kina 100.0 4.5E-36 1.5E-40 338.3 15.2 241 586-848 186-440 (454)
128 3dbq_A Dual specificity protei 100.0 6.1E-36 2.1E-40 324.9 15.5 238 588-846 9-274 (343)
129 3hko_A Calcium/calmodulin-depe 100.0 5.1E-36 1.7E-40 326.3 15.0 253 583-846 21-331 (345)
130 3dls_A PAS domain-containing s 100.0 1.6E-35 5.5E-40 319.9 18.6 236 586-846 22-275 (335)
131 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.1E-35 3.6E-40 337.6 17.9 247 588-846 185-449 (543)
132 3kk8_A Calcium/calmodulin depe 100.0 1.5E-35 5E-40 313.2 17.8 243 587-846 5-262 (284)
133 2rku_A Serine/threonine-protei 100.0 2.1E-35 7.2E-40 313.6 19.0 240 588-846 15-266 (294)
134 3ugc_A Tyrosine-protein kinase 100.0 5.8E-36 2E-40 318.1 14.5 248 588-848 10-287 (295)
135 1k9a_A Carboxyl-terminal SRC k 100.0 1.2E-35 4.1E-40 334.1 17.7 236 587-848 192-441 (450)
136 2zmd_A Dual specificity protei 100.0 1.3E-35 4.5E-40 327.3 17.7 238 588-846 56-321 (390)
137 3ork_A Serine/threonine protei 100.0 2.2E-36 7.4E-41 323.9 10.9 244 588-846 12-274 (311)
138 2eue_A Carbon catabolite derep 100.0 1.4E-35 4.9E-40 311.7 16.8 238 588-846 13-263 (275)
139 4f0f_A Serine/threonine-protei 100.0 5.3E-35 1.8E-39 309.4 21.2 243 588-848 19-285 (287)
140 3sv0_A Casein kinase I-like; t 100.0 9.8E-36 3.4E-40 335.0 16.4 250 588-848 7-274 (483)
141 3f3z_A Calcium/calmodulin-depe 100.0 1.5E-35 5.1E-40 311.9 16.7 240 587-846 8-262 (277)
142 1luf_A Muscle-specific tyrosin 100.0 7.9E-36 2.7E-40 324.5 15.0 247 585-848 44-331 (343)
143 3uc3_A Serine/threonine-protei 100.0 1.8E-35 6.2E-40 322.8 17.6 242 587-846 19-275 (361)
144 2ivs_A Proto-oncogene tyrosine 100.0 1.7E-35 5.8E-40 317.6 17.1 245 587-848 22-307 (314)
145 3oja_B Anopheles plasmodium-re 100.0 1.5E-34 5.2E-39 337.7 26.5 311 29-410 50-360 (597)
146 2y7j_A Phosphorylase B kinase 100.0 2.8E-35 9.5E-40 322.1 19.0 252 580-846 86-360 (365)
147 1rjb_A FL cytokine receptor; k 100.0 6.9E-36 2.3E-40 325.1 13.9 245 586-848 43-330 (344)
148 3fdn_A Serine/threonine-protei 100.0 1.1E-35 3.6E-40 313.4 14.9 239 587-846 8-258 (279)
149 3op5_A Serine/threonine-protei 100.0 3.8E-36 1.3E-40 329.4 11.9 249 587-848 34-325 (364)
150 2owb_A Serine/threonine-protei 100.0 2.4E-35 8.2E-40 319.1 17.8 240 588-846 41-292 (335)
151 3qup_A Tyrosine-protein kinase 100.0 2.2E-35 7.6E-40 318.0 17.4 246 586-848 21-294 (323)
152 3gxj_A TGF-beta receptor type- 100.0 4.2E-37 1.4E-41 328.4 3.9 242 588-848 3-293 (303)
153 3poz_A Epidermal growth factor 100.0 1.1E-35 3.7E-40 320.7 14.9 240 588-848 15-274 (327)
154 2i1m_A Macrophage colony-stimu 100.0 3.5E-36 1.2E-40 325.8 11.0 247 586-848 44-322 (333)
155 4agu_A Cyclin-dependent kinase 100.0 1.9E-35 6.5E-40 316.8 16.6 251 588-846 3-285 (311)
156 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1.2E-35 4.1E-40 325.6 15.3 241 587-847 64-334 (365)
157 1t46_A HOMO sapiens V-KIT hard 100.0 1E-35 3.5E-40 319.2 14.3 246 587-848 22-303 (313)
158 3llt_A Serine/threonine kinase 100.0 3.4E-35 1.2E-39 321.6 18.7 257 582-846 29-356 (360)
159 2vd5_A DMPK protein; serine/th 100.0 3.4E-36 1.1E-40 332.4 10.7 250 580-846 53-328 (412)
160 3gni_B Strad alpha; kinase fol 100.0 2E-35 6.8E-40 326.9 16.9 253 588-846 25-334 (389)
161 3i6u_A CDS1, serine/threonine- 100.0 2.1E-35 7.1E-40 329.0 17.1 247 585-846 132-400 (419)
162 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 1.4E-35 4.7E-40 333.9 15.7 241 586-848 182-436 (452)
163 2acx_A G protein-coupled recep 100.0 1.8E-35 6.2E-40 336.2 16.7 245 588-846 184-445 (576)
164 2eva_A TAK1 kinase - TAB1 chim 100.0 1.6E-35 5.5E-40 316.3 15.4 240 588-848 8-259 (307)
165 1opk_A P150, C-ABL, proto-onco 100.0 1.4E-35 4.8E-40 337.3 15.8 241 587-848 219-474 (495)
166 2pvf_A Fibroblast growth facto 100.0 3.3E-35 1.1E-39 318.0 18.0 244 587-848 34-314 (334)
167 3g33_A Cell division protein k 100.0 2.7E-35 9.3E-40 315.0 17.1 255 586-846 7-297 (308)
168 1mp8_A Focal adhesion kinase 1 100.0 2.3E-35 7.9E-40 311.1 16.3 241 587-848 14-272 (281)
169 2ac3_A MAP kinase-interacting 100.0 1.8E-35 6.1E-40 317.8 15.7 249 588-846 12-296 (316)
170 1u5q_A Serine/threonine protei 100.0 1.5E-35 5E-40 321.7 15.0 238 588-847 54-307 (348)
171 3bhy_A Death-associated protei 100.0 3E-35 1E-39 310.6 16.7 244 588-846 5-266 (283)
172 3g2f_A Bone morphogenetic prot 100.0 2E-35 6.8E-40 320.3 15.8 250 587-848 12-314 (336)
173 3kmu_A ILK, integrin-linked ki 100.0 2.2E-35 7.4E-40 309.5 15.5 239 588-848 10-266 (271)
174 3kex_A Receptor tyrosine-prote 100.0 2.2E-35 7.5E-40 318.1 15.9 243 588-848 13-272 (325)
175 4eut_A Serine/threonine-protei 100.0 1.7E-35 5.7E-40 327.8 15.2 254 588-848 9-305 (396)
176 1vzo_A Ribosomal protein S6 ki 100.0 6.1E-36 2.1E-40 326.1 11.6 246 588-847 54-323 (355)
177 3a7i_A MST3 kinase, serine/thr 100.0 6.1E-35 2.1E-39 311.5 19.0 239 588-847 22-272 (303)
178 3oz6_A Mitogen-activated prote 100.0 1.6E-35 5.4E-40 327.5 14.7 252 585-846 6-329 (388)
179 3t9t_A Tyrosine-protein kinase 100.0 1.9E-35 6.3E-40 309.4 14.1 240 587-848 7-260 (267)
180 3is5_A Calcium-dependent prote 100.0 2.2E-35 7.4E-40 311.8 14.6 242 588-846 22-279 (285)
181 3q60_A ROP5B; pseudokinase, tr 100.0 1.3E-35 4.5E-40 326.0 13.4 246 588-846 62-353 (371)
182 1p4o_A Insulin-like growth fac 100.0 1.1E-35 3.9E-40 320.2 12.6 250 582-848 19-295 (322)
183 2v62_A Serine/threonine-protei 100.0 1.1E-35 3.8E-40 323.2 12.5 248 588-848 37-324 (345)
184 1b6c_B TGF-B superfamily recep 100.0 4.8E-35 1.6E-39 318.2 17.5 250 580-848 34-332 (342)
185 3c1x_A Hepatocyte growth facto 100.0 4.6E-35 1.6E-39 320.5 17.4 240 589-848 90-351 (373)
186 4fmz_A Internalin; leucine ric 100.0 2.1E-34 7.2E-39 313.7 22.5 306 50-407 40-345 (347)
187 2h34_A Serine/threonine-protei 100.0 2.5E-35 8.5E-40 315.2 14.8 247 586-848 32-292 (309)
188 4e5w_A Tyrosine-protein kinase 100.0 3.3E-35 1.1E-39 313.5 15.5 249 588-848 21-298 (302)
189 3com_A Serine/threonine-protei 100.0 3.1E-35 1.1E-39 315.6 15.3 241 586-846 27-279 (314)
190 1mqb_A Ephrin type-A receptor 100.0 8.6E-35 3E-39 314.3 18.4 241 588-848 44-305 (333)
191 2wqm_A Serine/threonine-protei 100.0 9.5E-35 3.2E-39 311.1 18.5 250 587-848 31-293 (310)
192 3kfa_A Tyrosine-protein kinase 100.0 1.7E-35 5.7E-40 313.5 12.4 242 586-848 11-267 (288)
193 2vgo_A Serine/threonine-protei 100.0 5.7E-35 2E-39 308.6 16.4 238 588-846 14-263 (284)
194 3og7_A AKAP9-BRAF fusion prote 100.0 3.5E-35 1.2E-39 311.0 14.7 246 587-848 23-284 (289)
195 2w5a_A Serine/threonine-protei 100.0 2E-35 6.7E-40 311.4 12.7 246 587-848 5-270 (279)
196 3ttj_A Mitogen-activated prote 100.0 1.2E-34 4.1E-39 326.4 19.8 248 587-846 61-356 (464)
197 2yex_A Serine/threonine-protei 100.0 9.2E-35 3.1E-39 305.7 17.7 244 586-847 5-263 (276)
198 4fmz_A Internalin; leucine ric 100.0 4.4E-34 1.5E-38 311.2 23.6 308 25-384 39-346 (347)
199 2clq_A Mitogen-activated prote 100.0 1.1E-34 3.8E-39 308.3 18.5 243 588-846 22-279 (295)
200 2xir_A Vascular endothelial gr 100.0 2.5E-35 8.6E-40 316.6 13.4 252 580-848 19-306 (316)
201 1u59_A Tyrosine-protein kinase 100.0 1.2E-34 4.1E-39 306.6 18.3 240 588-848 9-268 (287)
202 3kvw_A DYRK2, dual specificity 100.0 1.9E-34 6.4E-39 322.1 20.6 191 588-786 97-302 (429)
203 2jam_A Calcium/calmodulin-depe 100.0 6.3E-35 2.2E-39 311.5 15.9 240 587-846 8-262 (304)
204 1qpc_A LCK kinase; alpha beta 100.0 8.6E-35 3E-39 306.4 16.6 240 587-848 12-265 (279)
205 3lxl_A Tyrosine-protein kinase 100.0 5E-35 1.7E-39 315.7 15.1 248 588-848 23-299 (327)
206 4aaa_A Cyclin-dependent kinase 100.0 3.2E-35 1.1E-39 317.8 13.5 251 588-846 25-307 (331)
207 3byv_A Rhoptry kinase; malaria 100.0 2.7E-35 9.2E-40 324.1 13.2 235 587-846 72-360 (377)
208 3cc6_A Protein tyrosine kinase 100.0 1.3E-34 4.4E-39 305.4 17.5 241 587-848 11-269 (281)
209 2jii_A Serine/threonine-protei 100.0 1.8E-35 6.3E-40 322.5 11.4 250 588-848 42-332 (352)
210 2ft3_A Biglycan; proteoglycan, 100.0 1.7E-33 5.8E-38 304.2 26.7 288 85-406 34-331 (332)
211 3lzb_A Epidermal growth factor 100.0 9.4E-35 3.2E-39 313.1 16.7 240 588-848 15-274 (327)
212 3mwu_A Calmodulin-domain prote 100.0 8.8E-35 3E-39 331.1 17.2 242 587-846 21-277 (486)
213 4fvq_A Tyrosine-protein kinase 100.0 3E-35 1E-39 311.7 12.4 234 588-848 8-271 (289)
214 3mtl_A Cell division protein k 100.0 2.4E-35 8.3E-40 317.5 11.4 253 588-846 2-282 (324)
215 2h6d_A 5'-AMP-activated protei 100.0 1.1E-34 3.6E-39 305.2 16.0 239 588-846 11-262 (276)
216 3q5i_A Protein kinase; CDPK, m 100.0 1.4E-34 4.6E-39 330.9 18.2 244 587-846 35-302 (504)
217 3lij_A Calcium/calmodulin depe 100.0 1.2E-34 4E-39 330.6 17.4 242 587-846 36-292 (494)
218 1x8b_A WEE1HU, WEE1-like prote 100.0 1.9E-34 6.5E-39 305.4 17.7 239 586-847 9-281 (289)
219 3brb_A Proto-oncogene tyrosine 100.0 2.1E-34 7.2E-39 308.9 18.2 247 586-848 32-304 (313)
220 3fhr_A MAP kinase-activated pr 100.0 1.2E-34 4.3E-39 313.4 16.5 245 587-846 27-288 (336)
221 3f66_A Hepatocyte growth facto 100.0 2.3E-34 8E-39 306.3 18.2 241 588-848 25-287 (298)
222 3nyv_A Calmodulin-domain prote 100.0 5.3E-35 1.8E-39 333.1 13.9 243 587-846 25-282 (484)
223 1phk_A Phosphorylase kinase; g 100.0 1.6E-34 5.3E-39 307.6 16.6 245 587-846 16-284 (298)
224 1ua2_A CAK, cell division prot 100.0 4.8E-35 1.6E-39 318.3 12.9 257 585-847 7-293 (346)
225 3lxp_A Non-receptor tyrosine-p 100.0 1.2E-34 4.1E-39 311.3 15.8 245 590-848 33-306 (318)
226 3gbz_A Kinase, CMGC CDK; ssgci 100.0 9.5E-35 3.3E-39 313.6 15.0 252 585-846 31-319 (329)
227 1xku_A Decorin; proteoglycan, 100.0 3.4E-33 1.2E-37 301.7 27.2 289 85-406 32-330 (330)
228 2h8h_A Proto-oncogene tyrosine 100.0 4.9E-35 1.7E-39 336.0 13.3 241 586-848 265-519 (535)
229 2a19_B Interferon-induced, dou 100.0 1.6E-34 5.6E-39 305.2 16.2 240 586-848 9-270 (284)
230 2x7f_A TRAF2 and NCK-interacti 100.0 8.8E-35 3E-39 313.8 14.3 243 585-846 21-287 (326)
231 3n9x_A Phosphotransferase; mal 100.0 2.3E-34 7.7E-39 322.2 18.0 189 587-784 25-253 (432)
232 1fvr_A Tyrosine-protein kinase 100.0 1.7E-34 5.8E-39 311.6 16.4 242 588-848 25-296 (327)
233 3ll6_A Cyclin G-associated kin 100.0 2.3E-34 7.8E-39 312.1 17.4 239 588-848 28-304 (337)
234 2ozo_A Tyrosine-protein kinase 100.0 2.3E-34 7.8E-39 335.0 18.6 233 595-848 343-594 (613)
235 2pml_X PFPK7, Ser/Thr protein 100.0 2.3E-34 7.8E-39 313.6 17.1 246 587-846 30-323 (348)
236 1xbb_A Tyrosine-protein kinase 100.0 2.1E-34 7.2E-39 305.4 16.4 241 587-848 15-275 (291)
237 1t4h_A Serine/threonine-protei 100.0 3.9E-34 1.3E-38 303.2 18.3 238 589-846 27-283 (290)
238 2ycf_A Serine/threonine-protei 100.0 9.6E-35 3.3E-39 312.8 13.8 246 586-846 8-275 (322)
239 2wtk_C Serine/threonine-protei 100.0 3.3E-34 1.1E-38 306.2 17.8 243 587-846 4-264 (305)
240 2yfx_A Tyrosine-protein kinase 100.0 1.4E-34 4.9E-39 312.2 15.1 245 587-848 29-300 (327)
241 2ft3_A Biglycan; proteoglycan, 100.0 2.1E-33 7.2E-38 303.5 24.1 290 108-429 33-330 (332)
242 2vx3_A Dual specificity tyrosi 100.0 5E-34 1.7E-38 314.6 19.5 195 586-786 52-261 (382)
243 3eqc_A Dual specificity mitoge 100.0 1E-34 3.5E-39 317.8 14.0 247 588-846 33-325 (360)
244 3rp9_A Mitogen-activated prote 100.0 2.9E-34 1E-38 324.5 18.1 183 588-779 53-280 (458)
245 3fme_A Dual specificity mitoge 100.0 8.3E-35 2.9E-39 308.4 12.8 244 587-846 6-267 (290)
246 3mi9_A Cell division protein k 100.0 1.9E-34 6.5E-39 314.5 15.7 251 588-846 17-312 (351)
247 1z57_A Dual specificity protei 100.0 5.9E-34 2E-38 309.1 19.5 246 588-846 14-329 (339)
248 1cm8_A Phosphorylated MAP kina 100.0 2.1E-34 7.3E-39 315.1 16.0 247 587-846 24-308 (367)
249 1byg_A CSK, protein (C-termina 100.0 8.4E-35 2.9E-39 306.3 12.2 236 587-848 20-269 (278)
250 2j7t_A Serine/threonine-protei 100.0 5.6E-35 1.9E-39 311.7 10.9 242 587-846 18-276 (302)
251 2xrw_A Mitogen-activated prote 100.0 6.1E-34 2.1E-38 312.4 19.3 247 588-846 25-319 (371)
252 3pls_A Macrophage-stimulating 100.0 9.2E-34 3.1E-38 301.7 19.4 240 589-848 22-283 (298)
253 3an0_A Dual specificity mitoge 100.0 1.3E-34 4.6E-39 314.3 13.1 244 587-846 50-311 (340)
254 2buj_A Serine/threonine-protei 100.0 2.9E-34 1E-38 308.4 15.3 245 588-848 29-302 (317)
255 1wak_A Serine/threonine-protei 100.0 4.1E-34 1.4E-38 317.7 16.7 247 588-846 37-392 (397)
256 3e3p_A Protein kinase, putativ 100.0 2.1E-34 7.2E-39 315.4 13.3 259 581-846 16-315 (360)
257 3cek_A Dual specificity protei 100.0 7.8E-34 2.7E-38 304.4 17.3 240 586-846 26-293 (313)
258 3a99_A Proto-oncogene serine/t 100.0 5.4E-34 1.8E-38 306.4 16.1 236 585-846 40-294 (320)
259 2vwi_A Serine/threonine-protei 100.0 2.9E-34 1E-38 306.3 13.9 249 586-846 13-288 (303)
260 3nsz_A CK II alpha, casein kin 100.0 9.3E-34 3.2E-38 306.4 17.9 242 588-846 36-320 (330)
261 2r3i_A Cell division protein k 100.0 1.3E-33 4.6E-38 300.6 18.8 252 588-846 3-284 (299)
262 3pg1_A Mitogen-activated prote 100.0 2.6E-34 9E-39 314.8 13.6 261 579-846 13-317 (362)
263 1zy4_A Serine/threonine-protei 100.0 4.2E-34 1.4E-38 305.0 14.8 241 586-846 4-284 (303)
264 2w1i_A JAK2; chromosomal rearr 100.0 3.9E-34 1.3E-38 308.5 14.6 248 588-848 41-318 (326)
265 4fl3_A Tyrosine-protein kinase 100.0 5.4E-34 1.8E-38 332.6 16.5 234 594-848 375-627 (635)
266 1u46_A ACK-1, activated CDC42 100.0 3E-34 1E-38 304.3 13.0 242 588-848 18-280 (291)
267 2fst_X Mitogen-activated prote 100.0 3.3E-34 1.1E-38 313.2 13.8 247 587-846 28-312 (367)
268 4e7w_A Glycogen synthase kinas 100.0 3.1E-34 1.1E-38 317.0 13.7 253 588-846 40-322 (394)
269 3eb0_A Putative uncharacterize 100.0 5.7E-34 2E-38 314.2 15.2 256 584-846 3-322 (383)
270 3rgf_A Cyclin-dependent kinase 100.0 2.9E-34 9.9E-39 319.1 12.6 194 588-785 20-238 (405)
271 3qyz_A Mitogen-activated prote 100.0 6.7E-34 2.3E-38 311.5 15.2 249 587-846 26-314 (364)
272 1blx_A Cyclin-dependent kinase 100.0 1.7E-33 5.7E-38 303.8 18.1 255 586-846 9-297 (326)
273 2eu9_A Dual specificity protei 100.0 2.2E-33 7.4E-38 306.8 19.1 246 588-846 19-334 (355)
274 3aln_A Dual specificity mitoge 100.0 1.5E-33 5.2E-38 304.2 17.6 245 588-846 22-286 (327)
275 2wei_A Calmodulin-domain prote 100.0 7.9E-34 2.7E-38 300.3 14.3 244 585-846 19-277 (287)
276 2y4i_B KSR2, HKSR2, kinase sup 100.0 6.4E-34 2.2E-38 306.1 13.5 243 586-848 31-298 (319)
277 4exu_A Mitogen-activated prote 100.0 1.5E-33 5E-38 309.4 16.1 246 587-846 41-324 (371)
278 1q8y_A SR protein kinase; tran 100.0 2.2E-33 7.7E-38 308.9 16.3 247 588-846 19-334 (373)
279 1j1b_A Glycogen synthase kinas 100.0 1.1E-33 3.9E-38 315.0 14.0 252 588-846 54-337 (420)
280 3qa8_A MGC80376 protein; kinas 100.0 1.4E-33 4.8E-38 323.5 14.9 253 587-846 13-298 (676)
281 2b9h_A MAP kinase FUS3, mitoge 100.0 1.7E-33 5.9E-38 307.3 14.9 249 587-846 10-306 (353)
282 2i6l_A Mitogen-activated prote 100.0 2.3E-33 7.8E-38 301.9 15.4 247 588-846 11-306 (320)
283 1xku_A Decorin; proteoglycan, 100.0 4.6E-32 1.6E-36 292.9 25.4 294 26-358 27-330 (330)
284 2j0j_A Focal adhesion kinase 1 100.0 3.2E-33 1.1E-37 327.3 17.4 241 587-848 389-647 (656)
285 2iwi_A Serine/threonine-protei 100.0 2.6E-33 9E-38 300.2 14.9 237 584-846 27-284 (312)
286 2rio_A Serine/threonine-protei 100.0 1.9E-33 6.5E-38 314.7 14.3 246 589-846 16-296 (434)
287 2dyl_A Dual specificity mitoge 100.0 5E-33 1.7E-37 298.9 16.8 240 587-846 24-284 (318)
288 1ogq_A PGIP-2, polygalacturona 100.0 3.7E-33 1.3E-37 298.3 15.3 249 5-262 50-302 (313)
289 3p23_A Serine/threonine-protei 100.0 3.1E-33 1.1E-37 311.8 15.2 243 588-846 24-284 (432)
290 3coi_A Mitogen-activated prote 100.0 4.3E-33 1.5E-37 303.9 15.8 245 588-846 24-306 (353)
291 3dzo_A Rhoptry kinase domain; 100.0 3.8E-33 1.3E-37 310.1 13.4 234 588-846 78-364 (413)
292 1z7x_W Ribonuclease inhibitor; 100.0 1.6E-36 5.5E-41 344.2 -16.7 360 30-409 3-412 (461)
293 1ogq_A PGIP-2, polygalacturona 100.0 1.7E-32 5.8E-37 293.2 14.9 251 254-505 53-309 (313)
294 3m2w_A MAP kinase-activated pr 100.0 2.6E-32 8.9E-37 290.4 13.3 226 588-846 17-257 (299)
295 1z7x_W Ribonuclease inhibitor; 100.0 1.2E-35 3.9E-40 337.1 -15.9 386 6-415 4-447 (461)
296 3uqc_A Probable conserved tran 100.0 1.7E-31 5.8E-36 281.4 15.8 219 588-848 31-261 (286)
297 2vuw_A Serine/threonine-protei 100.0 1.8E-31 6.1E-36 289.0 12.4 237 587-846 19-332 (336)
298 2pzi_A Probable serine/threoni 100.0 4.2E-31 1.4E-35 312.8 16.0 222 588-844 80-319 (681)
299 1ozn_A Reticulon 4 receptor; N 100.0 1.1E-29 3.9E-34 267.9 20.5 254 8-271 14-268 (285)
300 2z80_A TOLL-like receptor 2, v 100.0 4E-30 1.4E-34 280.3 16.9 276 109-410 32-316 (353)
301 2z80_A TOLL-like receptor 2, v 100.0 5.8E-30 2E-34 279.0 16.1 280 50-361 27-315 (353)
302 2z66_A Variable lymphocyte rec 100.0 2E-29 6.7E-34 269.2 18.7 247 88-360 11-261 (306)
303 2z66_A Variable lymphocyte rec 100.0 1.3E-29 4.3E-34 270.6 16.2 247 111-384 10-261 (306)
304 1ozn_A Reticulon 4 receptor; N 100.0 5.2E-29 1.8E-33 262.9 18.8 207 108-337 32-239 (285)
305 3zyj_A Leucine-rich repeat-con 100.0 1E-28 3.5E-33 277.6 21.9 245 88-360 47-292 (440)
306 3zyi_A Leucine-rich repeat-con 100.0 1.2E-28 4.1E-33 278.0 21.9 245 88-360 58-303 (452)
307 3zyj_A Leucine-rich repeat-con 100.0 3.1E-28 1.1E-32 273.6 22.4 249 109-408 44-292 (440)
308 3zyi_A Leucine-rich repeat-con 100.0 3.3E-28 1.1E-32 274.4 21.3 228 30-288 75-303 (452)
309 3g06_A SSPH2 (leucine-rich rep 100.0 2.1E-27 7.3E-32 274.3 25.7 248 108-419 61-308 (622)
310 4fcg_A Uncharacterized protein 100.0 6.7E-28 2.3E-32 259.1 17.4 234 156-408 81-314 (328)
311 1wwl_A Monocyte differentiatio 100.0 4.7E-29 1.6E-33 266.6 7.5 248 224-479 39-311 (312)
312 3g06_A SSPH2 (leucine-rich rep 99.9 6.9E-27 2.3E-31 270.1 25.3 269 30-395 40-308 (622)
313 4fcg_A Uncharacterized protein 99.9 7.2E-28 2.5E-32 258.8 15.7 224 108-383 81-313 (328)
314 3o53_A Protein LRIM1, AGAP0063 99.9 4E-29 1.4E-33 267.8 5.8 257 87-379 13-270 (317)
315 1wwl_A Monocyte differentiatio 99.9 2.3E-29 8E-34 268.9 3.2 251 104-409 39-310 (312)
316 3o53_A Protein LRIM1, AGAP0063 99.9 9.9E-30 3.4E-34 272.5 0.3 150 275-428 120-271 (317)
317 3ogk_B Coronatine-insensitive 99.9 1.4E-30 4.6E-35 305.3 -8.5 419 26-473 69-547 (592)
318 3ogk_B Coronatine-insensitive 99.9 5.8E-30 2E-34 299.9 -11.0 374 28-409 110-527 (592)
319 2z62_A TOLL-like receptor 4, v 99.9 1.8E-26 6.1E-31 242.2 16.6 226 9-245 11-241 (276)
320 2z62_A TOLL-like receptor 4, v 99.9 4.9E-26 1.7E-30 238.8 17.6 208 276-483 29-243 (276)
321 3oja_A Leucine-rich immune mol 99.9 1.5E-27 5.3E-32 270.3 5.8 236 83-355 33-270 (487)
322 3oja_A Leucine-rich immune mol 99.9 5.2E-27 1.8E-31 266.0 9.4 233 157-426 35-269 (487)
323 2o6q_A Variable lymphocyte rec 99.9 7.7E-25 2.6E-29 228.7 23.2 207 30-245 16-222 (270)
324 2o6q_A Variable lymphocyte rec 99.9 4.5E-25 1.6E-29 230.5 21.4 206 4-219 15-220 (270)
325 3rfs_A Internalin B, repeat mo 99.9 3.3E-26 1.1E-30 239.4 12.7 208 26-250 37-244 (272)
326 3rfs_A Internalin B, repeat mo 99.9 4E-25 1.4E-29 231.1 20.3 231 28-276 17-247 (272)
327 1p9a_G Platelet glycoprotein I 99.9 1.9E-24 6.4E-29 227.7 20.3 205 26-243 6-210 (290)
328 2p1m_B Transport inhibitor res 99.9 4.3E-28 1.5E-32 284.2 -12.7 398 26-476 62-518 (594)
329 4azs_A Methyltransferase WBDD; 99.9 3.1E-26 1E-30 263.1 1.4 178 595-782 241-437 (569)
330 1p9a_G Platelet glycoprotein I 99.9 1.3E-23 4.5E-28 221.3 20.8 200 5-218 10-209 (290)
331 2xwt_C Thyrotropin receptor; s 99.9 2.7E-24 9.2E-29 220.3 13.7 197 30-238 31-236 (239)
332 2p1m_B Transport inhibitor res 99.9 3.3E-28 1.1E-32 285.2 -18.3 393 27-452 102-543 (594)
333 3m19_A Variable lymphocyte rec 99.9 2.6E-23 9E-28 214.5 19.0 179 31-242 15-193 (251)
334 2xwt_C Thyrotropin receptor; s 99.9 2.2E-23 7.5E-28 213.5 14.6 132 108-241 31-169 (239)
335 3goz_A Leucine-rich repeat-con 99.9 4.1E-25 1.4E-29 241.3 1.6 154 88-241 2-180 (362)
336 4glp_A Monocyte differentiatio 99.9 1.2E-23 4E-28 224.5 11.7 203 54-264 91-307 (310)
337 3m19_A Variable lymphocyte rec 99.9 2.4E-22 8.3E-27 207.3 20.6 177 8-218 17-193 (251)
338 3goz_A Leucine-rich repeat-con 99.9 5.6E-25 1.9E-29 240.2 0.3 262 112-416 2-305 (362)
339 4glp_A Monocyte differentiatio 99.9 9.8E-24 3.3E-28 225.2 9.9 227 55-313 65-308 (310)
340 4ay9_X Follicle-stimulating ho 99.9 1.2E-22 4.1E-27 220.5 17.8 216 10-235 14-233 (350)
341 1h6u_A Internalin H; cell adhe 99.9 5.1E-23 1.7E-27 219.0 14.2 195 25-241 36-230 (308)
342 4ay9_X Follicle-stimulating ho 99.9 8.2E-23 2.8E-27 221.9 14.3 150 89-241 14-167 (350)
343 1h6u_A Internalin H; cell adhe 99.9 1.2E-22 4.2E-27 216.1 11.6 125 106-240 39-163 (308)
344 2ast_B S-phase kinase-associat 99.9 8.3E-24 2.8E-28 228.8 2.1 149 86-238 49-205 (336)
345 2ca6_A RAN GTPase-activating p 99.9 5.6E-25 1.9E-29 242.7 -7.4 283 110-427 11-338 (386)
346 2ast_B S-phase kinase-associat 99.9 1.1E-23 3.7E-28 227.9 -0.6 198 181-405 48-257 (336)
347 2ca6_A RAN GTPase-activating p 99.9 3.5E-24 1.2E-28 236.4 -5.0 150 91-241 16-200 (386)
348 2o6s_A Variable lymphocyte rec 99.9 3.6E-21 1.2E-25 192.4 17.4 178 57-250 10-187 (208)
349 2o6s_A Variable lymphocyte rec 99.9 1E-20 3.6E-25 189.0 19.9 180 33-228 10-189 (208)
350 3en9_A Glycoprotease, O-sialog 99.8 1.3E-21 4.5E-26 223.4 10.5 177 591-784 339-539 (540)
351 3cvr_A Invasion plasmid antige 99.8 3E-20 1E-24 211.9 17.4 187 31-251 60-253 (571)
352 2v9t_B SLIT homolog 2 protein 99.8 4.1E-20 1.4E-24 186.0 16.2 134 108-241 32-165 (220)
353 2v70_A SLIT-2, SLIT homolog 2 99.8 4.3E-20 1.5E-24 185.9 14.4 152 57-217 14-166 (220)
354 2xot_A Amphoterin-induced prot 99.8 3.6E-20 1.2E-24 201.8 14.6 158 85-242 40-203 (361)
355 1h6t_A Internalin B; cell adhe 99.8 2.5E-20 8.7E-25 196.3 12.0 172 26-217 42-213 (291)
356 3cvr_A Invasion plasmid antige 99.8 6.3E-20 2.2E-24 209.2 16.0 189 157-420 60-255 (571)
357 1h6t_A Internalin B; cell adhe 99.8 2.4E-20 8.2E-25 196.5 11.2 190 30-241 24-213 (291)
358 2xot_A Amphoterin-induced prot 99.8 8E-20 2.7E-24 199.1 15.2 177 33-218 21-203 (361)
359 1m9s_A Internalin B; cell inva 99.8 5.1E-20 1.7E-24 212.5 13.8 188 32-241 23-210 (605)
360 2v70_A SLIT-2, SLIT homolog 2 99.8 2E-19 6.8E-24 181.0 16.0 155 33-195 14-168 (220)
361 3e6j_A Variable lymphocyte rec 99.8 1.2E-19 4.3E-24 183.8 14.5 157 301-482 21-177 (229)
362 3e6j_A Variable lymphocyte rec 99.8 2.7E-19 9.4E-24 181.3 16.6 156 86-245 21-176 (229)
363 2v9t_B SLIT homolog 2 protein 99.8 3.6E-19 1.2E-23 179.2 17.2 135 84-218 32-166 (220)
364 1m9s_A Internalin B; cell inva 99.8 8E-20 2.7E-24 210.9 14.1 187 26-232 39-225 (605)
365 1zar_A RIO2 kinase; serine kin 99.8 8.7E-20 3E-24 190.7 10.6 147 582-756 84-252 (282)
366 1xeu_A Internalin C; cellular 99.8 1.1E-19 3.9E-24 188.2 6.1 169 29-218 18-186 (263)
367 1dce_A Protein (RAB geranylger 99.8 4.1E-21 1.4E-25 220.4 -5.5 203 177-425 346-566 (567)
368 1xeu_A Internalin C; cellular 99.8 1.2E-19 4.2E-24 187.9 5.9 171 52-243 17-187 (263)
369 3sb4_A Hypothetical leucine ri 99.8 3.3E-19 1.1E-23 191.7 8.6 118 107-231 48-179 (329)
370 3sb4_A Hypothetical leucine ri 99.8 1.5E-19 5.2E-24 194.3 5.9 290 107-425 24-327 (329)
371 4b8c_D Glucose-repressible alc 99.8 2.1E-19 7.1E-24 212.9 7.4 188 29-247 172-360 (727)
372 4ezg_A Putative uncharacterize 99.8 5E-19 1.7E-23 175.0 8.9 132 81-218 63-195 (197)
373 1dce_A Protein (RAB geranylger 99.8 1.8E-20 6.3E-25 215.0 -3.3 214 201-447 346-567 (567)
374 4ezg_A Putative uncharacterize 99.8 1.7E-18 5.8E-23 171.2 11.0 153 81-241 41-194 (197)
375 1w8a_A SLIT protein; signaling 99.7 1.3E-17 4.3E-22 164.0 14.1 129 87-218 11-140 (192)
376 4fdw_A Leucine rich hypothetic 99.7 9.2E-17 3.1E-21 176.2 22.4 253 77-383 129-382 (401)
377 1w8a_A SLIT protein; signaling 99.7 1.4E-17 4.9E-22 163.6 14.1 109 85-193 30-139 (192)
378 4fdw_A Leucine rich hypothetic 99.7 1.1E-16 3.9E-21 175.4 22.8 195 26-236 109-308 (401)
379 4b8c_D Glucose-repressible alc 99.7 2.4E-18 8.1E-23 203.8 7.9 230 54-336 173-404 (727)
380 4fs7_A Uncharacterized protein 99.7 2.6E-16 9E-21 173.4 22.9 327 78-422 65-391 (394)
381 4fs7_A Uncharacterized protein 99.7 8.4E-16 2.9E-20 169.4 24.0 333 20-400 61-393 (394)
382 2ell_A Acidic leucine-rich nuc 99.7 7.6E-17 2.6E-21 154.8 10.2 131 85-217 25-160 (168)
383 2wfh_A SLIT homolog 2 protein 99.7 4E-16 1.4E-20 153.1 14.3 126 88-217 14-139 (193)
384 2wfh_A SLIT homolog 2 protein 99.7 3.2E-16 1.1E-20 153.9 13.3 130 111-244 13-142 (193)
385 2ell_A Acidic leucine-rich nuc 99.7 1.1E-16 3.8E-21 153.7 9.6 137 107-246 23-164 (168)
386 2je0_A Acidic leucine-rich nuc 99.6 1.9E-16 6.5E-21 148.7 8.5 128 83-212 16-148 (149)
387 2o6r_A Variable lymphocyte rec 99.6 1.9E-15 6.4E-20 146.4 15.6 129 87-218 10-138 (177)
388 2o6r_A Variable lymphocyte rec 99.6 9.6E-16 3.3E-20 148.5 13.0 134 109-245 8-141 (177)
389 2je0_A Acidic leucine-rich nuc 99.6 2.1E-16 7.1E-21 148.5 6.7 129 107-237 16-149 (149)
390 1zth_A RIO1 serine protein kin 99.6 5.6E-16 1.9E-20 159.8 10.3 133 590-733 49-219 (258)
391 1a9n_A U2A', U2A'; complex (nu 99.6 1.1E-15 3.9E-20 147.8 7.2 133 103-241 14-153 (176)
392 1a9n_A U2A', U2A'; complex (nu 99.6 1.9E-15 6.7E-20 146.1 6.2 106 109-217 43-153 (176)
393 4gyi_A RIO2 kinase; protein ki 99.6 4.6E-15 1.6E-19 158.4 9.3 134 589-734 96-266 (397)
394 4gt6_A Cell surface protein; l 99.5 5E-13 1.7E-17 147.1 23.6 290 99-408 78-370 (394)
395 1ds9_A Outer arm dynein; leuci 99.5 5E-17 1.7E-21 160.7 -10.0 89 103-194 65-154 (198)
396 4gt6_A Cell surface protein; l 99.5 6.5E-13 2.2E-17 146.2 21.7 337 21-408 54-391 (394)
397 3g39_A Variable lymphocyte rec 99.5 1.3E-13 4.4E-18 132.2 12.7 104 111-217 12-115 (170)
398 3g39_A Variable lymphocyte rec 99.5 1.5E-13 5.1E-18 131.7 12.7 105 86-193 11-115 (170)
399 1ds9_A Outer arm dynein; leuci 99.5 3.3E-16 1.1E-20 154.7 -7.0 133 276-413 19-158 (198)
400 2r9u_A Variable lymphocyte rec 99.5 2.3E-13 7.9E-18 130.8 12.8 104 111-217 15-118 (174)
401 2r9u_A Variable lymphocyte rec 99.5 2.7E-13 9.1E-18 130.4 12.7 104 87-193 15-118 (174)
402 3un9_A NLR family member X1; l 99.4 6.9E-15 2.4E-19 159.7 -7.1 86 132-217 155-252 (372)
403 2ifg_A High affinity nerve gro 99.3 4E-12 1.4E-16 137.5 9.2 102 89-193 13-116 (347)
404 4h09_A Hypothetical leucine ri 99.3 4.4E-10 1.5E-14 123.0 25.1 106 271-379 236-341 (379)
405 4h09_A Hypothetical leucine ri 99.3 1.7E-10 5.8E-15 126.2 21.1 129 293-425 211-339 (379)
406 2ifg_A High affinity nerve gro 99.3 7E-12 2.4E-16 135.5 9.5 105 111-218 11-117 (347)
407 3un9_A NLR family member X1; l 99.2 7.4E-14 2.5E-18 151.5 -8.5 158 84-241 72-252 (372)
408 3tm0_A Aminoglycoside 3'-phosp 98.9 6.8E-09 2.3E-13 107.1 12.7 139 584-731 10-212 (263)
409 2ra8_A Uncharacterized protein 98.9 1.3E-10 4.5E-15 124.8 -1.0 63 155-217 251-320 (362)
410 2ra8_A Uncharacterized protein 98.8 6.6E-10 2.3E-14 119.3 0.2 135 102-241 166-320 (362)
411 1nd4_A Aminoglycoside 3'-phosp 98.8 2.5E-08 8.7E-13 102.6 11.7 131 589-731 21-213 (264)
412 3dxp_A Putative acyl-COA dehyd 98.5 2.7E-07 9.2E-12 99.8 11.3 135 592-732 42-248 (359)
413 3sg8_A APH(2'')-ID; antibiotic 98.5 1.6E-08 5.6E-13 106.6 0.8 175 593-784 25-288 (304)
414 1io0_A Tropomodulin; LRR prote 98.4 1.4E-08 4.8E-13 98.2 -1.7 25 45-69 27-52 (185)
415 1io0_A Tropomodulin; LRR prote 98.4 4.7E-08 1.6E-12 94.6 0.1 114 295-408 32-164 (185)
416 3rw6_A Nuclear RNA export fact 98.3 5.5E-08 1.9E-12 98.8 0.0 84 320-427 167-259 (267)
417 3rw6_A Nuclear RNA export fact 98.3 3.4E-08 1.2E-12 100.3 -3.5 63 154-218 168-234 (267)
418 3r70_A Aminoglycoside phosphot 98.0 1.4E-05 4.6E-10 84.7 9.5 129 589-733 38-238 (320)
419 3e4g_A ATP synthase subunit S, 97.9 2.9E-06 9.9E-11 79.7 1.4 82 133-214 62-149 (176)
420 3e4g_A ATP synthase subunit S, 97.8 1E-05 3.5E-10 75.9 3.4 82 276-357 62-149 (176)
421 3rfe_A Platelet glycoprotein I 97.7 2.8E-05 9.5E-10 69.7 5.7 43 440-482 31-73 (130)
422 3tdw_A Gentamicin resistance p 97.7 9.7E-05 3.3E-09 77.4 9.5 125 593-732 24-224 (306)
423 3ats_A Putative uncharacterize 97.6 0.00018 6.2E-09 77.3 11.1 31 702-732 222-252 (357)
424 4gkh_A Aminoglycoside 3'-phosp 97.6 0.00011 3.7E-09 75.6 8.6 123 595-731 31-222 (272)
425 3ovc_A Hygromycin-B 4-O-kinase 97.5 0.00018 6.2E-09 77.2 9.4 141 589-733 42-244 (362)
426 3d1u_A Putative fructosamine-3 97.4 0.00041 1.4E-08 71.7 9.4 69 591-664 18-97 (288)
427 2q83_A YTAA protein; 2635576, 97.4 0.00051 1.8E-08 73.2 10.0 30 702-731 222-251 (346)
428 1pgv_A TMD-1, tropomodulin TMD 97.3 3E-05 1E-09 74.2 -0.0 112 105-216 38-169 (197)
429 1pgv_A TMD-1, tropomodulin TMD 97.3 3.1E-05 1E-09 74.2 -0.8 121 46-192 33-169 (197)
430 2olc_A MTR kinase, methylthior 97.1 0.0018 6.2E-08 70.5 11.0 30 702-732 227-256 (397)
431 3rfe_A Platelet glycoprotein I 96.9 0.0012 4.1E-08 58.9 6.4 36 109-144 32-67 (130)
432 3jr1_A Putative fructosamine-3 96.7 0.0067 2.3E-07 63.1 10.9 134 592-728 40-232 (312)
433 2pyw_A Uncharacterized protein 96.7 0.0079 2.7E-07 65.9 11.9 76 702-779 232-312 (420)
434 2ppq_A HSK, HK, homoserine kin 96.5 0.019 6.3E-07 60.3 12.7 153 578-731 7-216 (322)
435 2yle_A Protein spire homolog 1 96.5 0.0096 3.3E-07 57.1 9.0 98 663-778 34-131 (229)
436 3f7w_A Putative fructosamine-3 96.3 0.0089 3E-07 61.7 8.6 76 589-664 16-97 (288)
437 3csv_A Aminoglycoside phosphot 96.2 0.025 8.5E-07 59.7 11.5 32 702-733 183-218 (333)
438 3dxq_A Choline/ethanolamine ki 96.1 0.041 1.4E-06 57.0 12.6 30 702-732 173-202 (301)
439 1zyl_A Hypothetical protein YI 95.8 0.068 2.3E-06 56.1 12.8 29 702-732 195-223 (328)
440 3i1a_A Spectinomycin phosphotr 95.2 0.13 4.4E-06 54.2 12.5 31 702-732 206-236 (339)
441 1nw1_A Choline kinase (49.2 KD 95.0 0.047 1.6E-06 59.7 8.4 30 593-622 78-115 (429)
442 3feg_A Choline/ethanolamine ki 94.7 0.088 3E-06 56.3 9.5 135 593-731 55-253 (379)
443 2qg7_A Ethanolamine kinase PV0 94.3 0.18 6E-06 55.5 10.9 68 593-664 113-188 (458)
444 3c5i_A Choline kinase; choline 93.5 0.19 6.5E-06 53.7 9.1 28 703-731 213-240 (369)
445 3f2s_A CK, chetk-alpha, cholin 91.5 0.54 1.8E-05 50.4 9.3 29 703-731 245-279 (401)
446 2ks1_B Epidermal growth factor 91.1 0.21 7.1E-06 34.1 3.5 28 527-554 13-41 (44)
447 3mes_A Choline kinase; malaria 89.8 1.9 6.4E-05 46.6 11.7 29 703-732 263-291 (424)
448 3g15_A CK, chetk-alpha, cholin 88.6 0.46 1.6E-05 51.3 5.9 30 703-732 245-280 (401)
449 2l2t_A Receptor tyrosine-prote 88.6 0.3 1E-05 33.2 2.6 28 527-554 12-40 (44)
450 2jwa_A Receptor tyrosine-prote 87.4 0.33 1.1E-05 32.9 2.3 28 527-554 14-41 (44)
451 4ann_A ESSB; membrane protein, 84.4 1.2 4.2E-05 42.6 5.6 83 676-785 77-159 (215)
452 4ano_A ESSB; membrane protein, 77.9 2.8 9.5E-05 40.3 5.5 83 676-785 81-164 (219)
453 2lz0_A Uncharacterized protein 68.1 13 0.00045 30.6 6.7 15 173-187 36-50 (100)
454 2lz0_A Uncharacterized protein 68.1 11 0.00036 31.2 6.2 46 167-213 7-52 (100)
455 1iij_A ERBB-2 receptor protein 62.3 1.9 6.4E-05 27.6 0.3 25 527-551 10-34 (35)
456 2k1k_A Ephrin type-A receptor 58.7 5.1 0.00018 26.3 1.9 9 542-550 29-37 (38)
457 2knc_A Integrin alpha-IIB; tra 51.6 12 0.00043 26.6 3.1 25 521-545 10-34 (54)
458 2l8s_A Integrin alpha-1; trans 44.2 16 0.00054 26.0 2.6 24 522-545 8-31 (54)
459 2l6w_A Beta-type platelet-deri 39.6 8.9 0.00031 25.0 0.0 22 532-553 15-36 (39)
460 2k1a_A Integrin alpha-IIB; sin 31.1 26 0.00089 23.5 2.0 24 522-545 9-32 (42)
461 2ks1_B Epidermal growth factor 24.8 59 0.002 22.1 2.8 37 518-554 8-44 (44)
462 2l2t_A Receptor tyrosine-prote 24.4 60 0.002 22.0 2.8 33 522-554 11-43 (44)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.7e-63 Score=599.46 Aligned_cols=510 Identities=31% Similarity=0.489 Sum_probs=337.2
Q ss_pred CCCCCcEEEEecCCCceeee---eCC----------------------ccCCCCCCCCEEeCcCCccccCCCc--cccCC
Q 042123 1 CNDAGRVINISLPNIGVNGT---LHD----------------------FSFSSFPHLAYLDLTWNGFFGTIPP--QISNL 53 (849)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~---l~~----------------------~~~~~l~~L~~L~L~~n~i~~~~~~--~~~~l 53 (849)
|+ +|+||.++++..++.|. +++ ..|..+++|++|||++|.+.+.+|. .++++
T Consensus 47 C~-~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l 125 (768)
T 3rgz_A 47 CR-DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSC 125 (768)
T ss_dssp EE-TTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGC
T ss_pred EC-CCcEEEEECCCCCcCCccCccChhHhccCcccccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCC
Confidence 66 79999999999999997 432 3688899999999999999888888 88888
Q ss_pred CCCCEeeCCCCcCccccccccc--------------------------------------------ccCCCCCccccCeE
Q 042123 54 SNLRYLYLGSNQFSGNILAEVS--------------------------------------------SESSGGNLRYMSRL 89 (849)
Q Consensus 54 ~~L~~L~L~~N~l~~~~~~~~~--------------------------------------------~~~~~~~l~~L~~L 89 (849)
++|++|+|++|++++.++..+. ....+..+++|++|
T Consensus 126 ~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L 205 (768)
T 3rgz_A 126 SGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFL 205 (768)
T ss_dssp TTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEE
T ss_pred CCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEE
Confidence 8899999888887755443210 00112334445555
Q ss_pred eccCCcccccCCccCCCCCCCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccc----------------------
Q 042123 90 VINDNSLSGFIPPHIGNLKFLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGS---------------------- 147 (849)
Q Consensus 90 ~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~---------------------- 147 (849)
+|++|.+.+.+|. ++++++|++|+|++|++++..|.+|.++++|++|+|++|.+++.
T Consensus 206 ~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~L~~n~l~~~ 284 (768)
T 3rgz_A 206 DVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGE 284 (768)
T ss_dssp ECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCCCCTTCCEEECCSSEEEES
T ss_pred ECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECCCCcccCccCccccCCCCEEECcCCccCCc
Confidence 5555555544443 55555555555555555555555555555555555555544432
Q ss_pred cccccCCC-CCCCEEEcCCCcccccCCcCCCCCCCCCEEEccCCCCcCcCccc-ccCCCCCCEEeccCCcCccCCCcCcc
Q 042123 148 ILSSLGKL-KSLFDLQLNDNQLIGYIPRPFSNLTSVSTLRLSRNDLFGSIPDE-IGKMRSLSVLDLNQNQFKGVLPPSIS 225 (849)
Q Consensus 148 ~~~~~~~l-~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~~~ 225 (849)
+|..+.++ ++|++|+|++|++.+..|..|..+++|++|+|++|++.+.+|.. +.++++|++|++++|++++.+|..+.
T Consensus 285 ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~ 364 (768)
T 3rgz_A 285 IPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLT 364 (768)
T ss_dssp CCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHH
T ss_pred cCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHH
Confidence 22222222 34444444444444444444444444444444444444333332 44444444444444444444444443
Q ss_pred Ccc-ccchhhhcccccc--------------------------CCCCcchhhh-hhhhhhccCcCCCCCCCcccCCCCCc
Q 042123 226 NLT-NLKELALLYNHLS--------------------------GSIPPSLGNL-ILRQLLLSGNHFTGYLPYNICRGGAL 277 (849)
Q Consensus 226 ~l~-~L~~L~L~~N~l~--------------------------~~~p~~~~~~-~L~~L~L~~n~i~~~~~~~~~~~~~L 277 (849)
.++ +|++|++++|.++ +.+|..+... .|+.|++++|++++.+|..+..+++|
T Consensus 365 ~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L 444 (768)
T 3rgz_A 365 NLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKL 444 (768)
T ss_dssp HHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTC
T ss_pred hhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCC
Confidence 333 3333333333322 2223333222 24555555555555555555555555
Q ss_pred ceeeecccccccccCCCCCCcccccEEEccCccccCchhhhhCCCCCCCEEeccCccccCcccccCCCCCCCcEEeccCC
Q 042123 278 EIFTVSENHFQGTIPTSLRNCTSLIRVRLNGNNLTGNISEALGIYPNLTFIDLSRNNFYGEISSNWGKFPKLGTLNVSMN 357 (849)
Q Consensus 278 ~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 357 (849)
+.|++++|.+.+.+|..+..+++|++|++++|++++..|..+..+++|++|+|++|++.+.+|..++.+++|++|+|++|
T Consensus 445 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 524 (768)
T 3rgz_A 445 RDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNN 524 (768)
T ss_dssp CEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSS
T ss_pred CEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCC
Confidence 66666666665556666666666666666666666666666777777777777777777777777777777777777777
Q ss_pred ccccCCCCCccccccccccccccccccccCchhh----------------------------------------------
Q 042123 358 NITGGLPREIGNSSQLQAFDLSLNHIVGEIPKEL---------------------------------------------- 391 (849)
Q Consensus 358 ~i~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~---------------------------------------------- 391 (849)
.+++.+|..+.++++|+.|+|++|++++.+|..+
T Consensus 525 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 604 (768)
T 3rgz_A 525 SFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQL 604 (768)
T ss_dssp CCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGG
T ss_pred cccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhh
Confidence 7777777777777777777777777776665433
Q ss_pred ------------------------cCCCCCcEEEccCccccccCccccccccccccccccc---CCCCChhhhcccccce
Q 042123 392 ------------------------GKLNPLTKLILRGNQITGRLPKEIGSLTKLEYLDFSA---IGELPSQICNMKSLEK 444 (849)
Q Consensus 392 ------------------------~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~---l~~lp~~~~~l~~L~~ 444 (849)
..+++|+.|+|++|+++|.+|.+|+++++|+.|+++. .+.+|..++++++|+.
T Consensus 605 ~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~ 684 (768)
T 3rgz_A 605 NRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNI 684 (768)
T ss_dssp GGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCE
T ss_pred hccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCE
Confidence 2346678888888888889999999999999999986 3589999999999999
Q ss_pred eccCCcccccCCCccccccCCCcEEeccCCccccCCCCCcccccCcccccccCCCccCCCCCCCCCCCCc
Q 042123 445 LNLSHNNLSGSIPSCFEGMHGLSFIDMSYNELQCPVPNSTTFRGASVEALKGNKGLCGSAKGLQPCKPLR 514 (849)
Q Consensus 445 L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~ 514 (849)
|||++|+++|.+|..+..+++|++||+++|+++|.+|....|.......|.||+++||.+. .+|.+..
T Consensus 685 LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l--~~C~~~~ 752 (768)
T 3rgz_A 685 LDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPL--PRCDPSN 752 (768)
T ss_dssp EECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTS--CCCCSCC
T ss_pred EECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCCC--cCCCCCc
Confidence 9999999999999999999999999999999999999999998888899999999999874 3787544
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=3.8e-57 Score=544.21 Aligned_cols=464 Identities=34% Similarity=0.512 Sum_probs=380.5
Q ss_pred EEEEecCCCceeeeeCCccCCCCCCCCEEeCcCCccccCCCccccCCCCCCEeeCCCCcCcccccccccccCCCCCcccc
Q 042123 7 VINISLPNIGVNGTLHDFSFSSFPHLAYLDLTWNGFFGTIPPQISNLSNLRYLYLGSNQFSGNILAEVSSESSGGNLRYM 86 (849)
Q Consensus 7 ~~~~~~~~~~~~~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L 86 (849)
.+.|+++.+.+.+.++. |..+++|++|+|++|++++..|..|+++++|++|+|++|++++.++. ..+++|
T Consensus 202 L~~L~Ls~n~l~~~~~~--l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~--------~~l~~L 271 (768)
T 3rgz_A 202 LEFLDVSSNNFSTGIPF--LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPP--------LPLKSL 271 (768)
T ss_dssp CCEEECCSSCCCSCCCB--CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCC--------CCCTTC
T ss_pred CCEEECcCCcCCCCCcc--cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECCCCcccCccCc--------cccCCC
Confidence 34455555555554443 55556666666666666555566666666666666666665532211 156777
Q ss_pred CeEeccCCcccccCCccCCCC-CCCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccc-cCCCCCCCEEEcC
Q 042123 87 SRLVINDNSLSGFIPPHIGNL-KFLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSS-LGKLKSLFDLQLN 164 (849)
Q Consensus 87 ~~L~l~~n~l~~~~~~~~~~l-~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~-~~~l~~L~~L~L~ 164 (849)
++|+|++|.+++.+|..+.++ ++|++|+|++|++++..|..|.++++|++|+|++|.+++.+|.. |.++++|++|+|+
T Consensus 272 ~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls 351 (768)
T 3rgz_A 272 QYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLS 351 (768)
T ss_dssp CEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECC
T ss_pred CEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCc
Confidence 777777777777777776664 77888888888887777777888888888888888877555544 7788888888888
Q ss_pred CCcccccCCcCCCCCC-CCCEEEccCCCCcCcCcccccC--CCCCCEEeccCCcCccCCCcCccCccccchhhhcccccc
Q 042123 165 DNQLIGYIPRPFSNLT-SVSTLRLSRNDLFGSIPDEIGK--MRSLSVLDLNQNQFKGVLPPSISNLTNLKELALLYNHLS 241 (849)
Q Consensus 165 ~N~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~--l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 241 (849)
+|++.+..|..+..++ +|++|+|++|++++.+|..+.. +++|++|++++|++++.+|..+..+++|++|+|++|.++
T Consensus 352 ~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 431 (768)
T 3rgz_A 352 FNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLS 431 (768)
T ss_dssp SSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEE
T ss_pred CCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCccc
Confidence 8888777777777776 7888888888887777776666 788999999999998889999999999999999999999
Q ss_pred CCCCcchhhhh-hhhhhccCcCCCCCCCcccCCCCCcceeeecccccccccCCCCCCcccccEEEccCccccCchhhhhC
Q 042123 242 GSIPPSLGNLI-LRQLLLSGNHFTGYLPYNICRGGALEIFTVSENHFQGTIPTSLRNCTSLIRVRLNGNNLTGNISEALG 320 (849)
Q Consensus 242 ~~~p~~~~~~~-L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 320 (849)
+.+|..+..+. |+.|++++|++++.+|..+..+++|+.|++++|++++.+|..+.++++|+.|++++|++++..|..++
T Consensus 432 ~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~ 511 (768)
T 3rgz_A 432 GTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIG 511 (768)
T ss_dssp SCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGG
T ss_pred CcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHh
Confidence 99999888774 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCEEeccCccccCcccccCCCCCCCcEEeccCCccccCCCCC----------------------------------
Q 042123 321 IYPNLTFIDLSRNNFYGEISSNWGKFPKLGTLNVSMNNITGGLPRE---------------------------------- 366 (849)
Q Consensus 321 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~---------------------------------- 366 (849)
.+++|++|+|++|++.+.+|..+..+++|+.|++++|.+++.+|..
T Consensus 512 ~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 591 (768)
T 3rgz_A 512 RLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAG 591 (768)
T ss_dssp GCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSE
T ss_pred cCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccc
Confidence 9999999999999999999999999999999999999998776653
Q ss_pred ------------------------------------ccccccccccccccccccccCchhhcCCCCCcEEEccCcccccc
Q 042123 367 ------------------------------------IGNSSQLQAFDLSLNHIVGEIPKELGKLNPLTKLILRGNQITGR 410 (849)
Q Consensus 367 ------------------------------------~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~ 410 (849)
+..+++|+.|||++|++++.+|..|+.+++|+.|+|++|+++|.
T Consensus 592 ~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ 671 (768)
T 3rgz_A 592 NLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGS 671 (768)
T ss_dssp EEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSC
T ss_pred cccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCC
Confidence 34467899999999999999999999999999999999999999
Q ss_pred Cccccccccccccccccc---CCCCChhhhcccccceeccCCcccccCCCccccccCCCcEEeccCCccccCCC
Q 042123 411 LPKEIGSLTKLEYLDFSA---IGELPSQICNMKSLEKLNLSHNNLSGSIPSCFEGMHGLSFIDMSYNELQCPVP 481 (849)
Q Consensus 411 ~p~~~~~l~~L~~L~l~~---l~~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~ 481 (849)
+|..|+++++|++||++. .+.+|..+.++++|+.|||++|+++|.+|.. ..+.++....+.+|+.-|-.|
T Consensus 672 ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~-~~~~~~~~~~~~gN~~Lcg~~ 744 (768)
T 3rgz_A 672 IPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEM-GQFETFPPAKFLNNPGLCGYP 744 (768)
T ss_dssp CCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSS-SSGGGSCGGGGCSCTEEESTT
T ss_pred CChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCc-hhhccCCHHHhcCCchhcCCC
Confidence 999999999999999997 3589999999999999999999999999975 345556666788999777544
No 3
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=4e-55 Score=515.08 Aligned_cols=468 Identities=21% Similarity=0.226 Sum_probs=387.1
Q ss_pred cEEEEecCCCceeeeeCCccCCCCCCCCEEeCcCCccccCCCccccCCCCCCEeeCCCCcCcccccccccccCCCCCccc
Q 042123 6 RVINISLPNIGVNGTLHDFSFSSFPHLAYLDLTWNGFFGTIPPQISNLSNLRYLYLGSNQFSGNILAEVSSESSGGNLRY 85 (849)
Q Consensus 6 ~~~~~~~~~~~~~~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~ 85 (849)
.++.|+++.+.+.+... .+|..+++|++|+|++|++.++.|.+|+++++|++|+|++|++++. .+..|+++++
T Consensus 34 ~l~~L~Ls~n~i~~~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~------~~~~~~~l~~ 106 (606)
T 3t6q_A 34 STECLEFSFNVLPTIQN-TTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFM------AETALSGPKA 106 (606)
T ss_dssp TCCEEECTTCCCSEECT-TTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEE------CTTTTSSCTT
T ss_pred cCcEEEccCCccCcCCh-hHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCccccc------Chhhhccccc
Confidence 56788888888776543 4788888888888888888888888888888888888888888742 3445678888
Q ss_pred cCeEeccCCcccccCCccCCCCCCCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCC--EEEc
Q 042123 86 MSRLVINDNSLSGFIPPHIGNLKFLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLF--DLQL 163 (849)
Q Consensus 86 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~--~L~L 163 (849)
|++|++++|.+++..+..|+++++|++|++++|+++++....+..+++|++|++++|.+++..+..|+.+++|+ .|++
T Consensus 107 L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l 186 (606)
T 3t6q_A 107 LKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNL 186 (606)
T ss_dssp CCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEEC
T ss_pred ccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEec
Confidence 88888888888877677888888888888888888876655666688888888888888877778888888888 8888
Q ss_pred CCCcccccCCcCCCCC---------------------------------------------------CCCCEEEccCCCC
Q 042123 164 NDNQLIGYIPRPFSNL---------------------------------------------------TSVSTLRLSRNDL 192 (849)
Q Consensus 164 ~~N~l~~~~~~~~~~l---------------------------------------------------~~L~~L~Ls~N~l 192 (849)
++|.+.++.|..|... .+|++|++++|++
T Consensus 187 ~~n~l~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l 266 (606)
T 3t6q_A 187 NGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYF 266 (606)
T ss_dssp TTCCCCEECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCC
T ss_pred CCCccCccChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCcc
Confidence 8888888777766432 1677888888888
Q ss_pred cCcCcccccCCCCCCEEeccCCcCccCCCcCccCccccchhhhccccccCCCCcchhhh-hhhhhhccCcCCCCCCCc-c
Q 042123 193 FGSIPDEIGKMRSLSVLDLNQNQFKGVLPPSISNLTNLKELALLYNHLSGSIPPSLGNL-ILRQLLLSGNHFTGYLPY-N 270 (849)
Q Consensus 193 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~-~L~~L~L~~n~i~~~~~~-~ 270 (849)
++..+..|.++++|++|++++|+++ .+|..+..+++|++|++++|.+.+..|..+... .|++|++++|.+.+.++. .
T Consensus 267 ~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~ 345 (606)
T 3t6q_A 267 FNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGC 345 (606)
T ss_dssp SSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSST
T ss_pred CccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhh
Confidence 8777777888899999999999988 567788888999999999999886667666665 488999999988865544 4
Q ss_pred cCCCCCcceeeeccccccccc--CCCCCCcccccEEEccCccccCchhhhhCCCCCCCEEeccCccccCcccc-cCCCCC
Q 042123 271 ICRGGALEIFTVSENHFQGTI--PTSLRNCTSLIRVRLNGNNLTGNISEALGIYPNLTFIDLSRNNFYGEISS-NWGKFP 347 (849)
Q Consensus 271 ~~~~~~L~~L~l~~N~l~~~~--~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~ 347 (849)
+..+++|+.|++++|.+++.. +..+.++++|+.|++++|++++..+..+..+++|+.|++++|++.+..+. .+..++
T Consensus 346 ~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~ 425 (606)
T 3t6q_A 346 LENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLH 425 (606)
T ss_dssp TTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCT
T ss_pred hhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcc
Confidence 888899999999999988766 77888899999999999999888888888899999999999998876554 488889
Q ss_pred CCcEEeccCCccccCCCCCcccccccccccccccccccc---CchhhcCCCCCcEEEccCccccccCccccccccccccc
Q 042123 348 KLGTLNVSMNNITGGLPREIGNSSQLQAFDLSLNHIVGE---IPKELGKLNPLTKLILRGNQITGRLPKEIGSLTKLEYL 424 (849)
Q Consensus 348 ~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~N~i~~~---~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 424 (849)
+|++|++++|.+++..|..+..+++|++|++++|++++. .+..+..+++|+.|++++|++++..|..|+.+++|++|
T Consensus 426 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 505 (606)
T 3t6q_A 426 LLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHV 505 (606)
T ss_dssp TCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred cCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEE
Confidence 999999999999888888888899999999999998762 33668888999999999999998888889999999999
Q ss_pred cccc--C-CCCChhhhcccccceeccCCcccccCCCccccccCCCcEEeccCCccccCCCC
Q 042123 425 DFSA--I-GELPSQICNMKSLEKLNLSHNNLSGSIPSCFEGMHGLSFIDMSYNELQCPVPN 482 (849)
Q Consensus 425 ~l~~--l-~~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~ 482 (849)
++++ + +..|..+.++++| .|+|++|++++.+|..|..+++|+.|++++|||.|+|+.
T Consensus 506 ~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~ 565 (606)
T 3t6q_A 506 DLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCSN 565 (606)
T ss_dssp ECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGGG
T ss_pred ECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCCc
Confidence 9886 3 3446788888899 999999999988888888999999999999999998874
No 4
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=5.1e-54 Score=505.62 Aligned_cols=482 Identities=21% Similarity=0.269 Sum_probs=425.3
Q ss_pred EEecCCCceeeeeCCccCCCCCCCCEEeCcCCccccCCCccccCCCCCCEeeCCCCcCcccccccccccCCCCCccccCe
Q 042123 9 NISLPNIGVNGTLHDFSFSSFPHLAYLDLTWNGFFGTIPPQISNLSNLRYLYLGSNQFSGNILAEVSSESSGGNLRYMSR 88 (849)
Q Consensus 9 ~~~~~~~~~~~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~ 88 (849)
.+++...++...... + -+++++|||++|+|+++.|.+|+++++|++|+|++|++++ ..+.+|+++++|++
T Consensus 16 ~~~c~~~~l~~iP~~--l--~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~------~~~~~~~~l~~L~~ 85 (606)
T 3t6q_A 16 TYNCENLGLNEIPGT--L--PNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYW------IHEDTFQSQHRLDT 85 (606)
T ss_dssp EEECTTSCCSSCCTT--S--CTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCE------ECTTTTTTCTTCCE
T ss_pred eEECCCCCcccCcCC--C--CCcCcEEEccCCccCcCChhHhccCccceEEECCCCccce------eChhhccCccccCe
Confidence 467777776544332 2 2479999999999999999999999999999999999974 34567889999999
Q ss_pred EeccCCcccccCCccCCCCCCCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEEcCCCcc
Q 042123 89 LVINDNSLSGFIPPHIGNLKFLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLNDNQL 168 (849)
Q Consensus 89 L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 168 (849)
|+|++|.+.+..|..|+++++|++|++++|+|+++.+..|.++++|++|+|++|++++.....+.++++|++|+|++|.+
T Consensus 86 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 165 (606)
T 3t6q_A 86 LVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAI 165 (606)
T ss_dssp EECTTCCCSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCC
T ss_pred eeCCCCcccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcc
Confidence 99999999999999999999999999999999988889999999999999999999976656666799999999999999
Q ss_pred cccCCcCCCCCCCCC--EEEccCCCCcCcCcccccCC-------------------------------------------
Q 042123 169 IGYIPRPFSNLTSVS--TLRLSRNDLFGSIPDEIGKM------------------------------------------- 203 (849)
Q Consensus 169 ~~~~~~~~~~l~~L~--~L~Ls~N~l~~~~~~~~~~l------------------------------------------- 203 (849)
.++.+..|..+++|+ +|++++|++.+..|..|...
T Consensus 166 ~~~~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~ 245 (606)
T 3t6q_A 166 HYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISP 245 (606)
T ss_dssp CEECHHHHHTTTTCCSEEEECTTCCCCEECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCG
T ss_pred cccChhhhhhhcccceeEEecCCCccCccChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccCh
Confidence 999999999999999 99999999997777655431
Q ss_pred --------CCCCEEeccCCcCccCCCcCccCccccchhhhccccccCCCCcchhhh-hhhhhhccCcCCCCCCCcccCCC
Q 042123 204 --------RSLSVLDLNQNQFKGVLPPSISNLTNLKELALLYNHLSGSIPPSLGNL-ILRQLLLSGNHFTGYLPYNICRG 274 (849)
Q Consensus 204 --------~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~-~L~~L~L~~n~i~~~~~~~~~~~ 274 (849)
.+|+.|++++|.++++.+..|..+++|++|++++|.++ .+|..+..+ .|++|++++|++++..|..+..+
T Consensus 246 ~~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l 324 (606)
T 3t6q_A 246 AVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNF 324 (606)
T ss_dssp GGGGGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGC
T ss_pred hHhchhhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhcc
Confidence 16889999999999888888999999999999999998 788877665 49999999999999989999999
Q ss_pred CCcceeeecccccccccCC-CCCCcccccEEEccCccccCch--hhhhCCCCCCCEEeccCccccCcccccCCCCCCCcE
Q 042123 275 GALEIFTVSENHFQGTIPT-SLRNCTSLIRVRLNGNNLTGNI--SEALGIYPNLTFIDLSRNNFYGEISSNWGKFPKLGT 351 (849)
Q Consensus 275 ~~L~~L~l~~N~l~~~~~~-~~~~l~~L~~L~L~~n~l~~~~--~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 351 (849)
++|+.|++++|.+.+.+|. .+..+++|+.|++++|.+++.. +..+..+++|++|++++|++.+..+..|..+++|++
T Consensus 325 ~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 404 (606)
T 3t6q_A 325 PSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLEL 404 (606)
T ss_dssp TTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSE
T ss_pred CcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCe
Confidence 9999999999999866554 5899999999999999999776 778999999999999999999888999999999999
Q ss_pred EeccCCccccCCCCC-ccccccccccccccccccccCchhhcCCCCCcEEEccCcccccc---Ccccccccccccccccc
Q 042123 352 LNVSMNNITGGLPRE-IGNSSQLQAFDLSLNHIVGEIPKELGKLNPLTKLILRGNQITGR---LPKEIGSLTKLEYLDFS 427 (849)
Q Consensus 352 L~Ls~N~i~~~~p~~-~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~---~p~~~~~l~~L~~L~l~ 427 (849)
|++++|.+++..|.. +..+++|+.|++++|.+++..|..|..+++|++|++++|++++. .+..+..+++|++|+++
T Consensus 405 L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls 484 (606)
T 3t6q_A 405 LDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLS 484 (606)
T ss_dssp EECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECT
T ss_pred EECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECC
Confidence 999999999776654 89999999999999999998999999999999999999999863 34679999999999998
Q ss_pred c--CCCC-ChhhhcccccceeccCCcccccCCCccccccCCCcEEeccCCccccCCCCC-cccccCcccccccCCCccC
Q 042123 428 A--IGEL-PSQICNMKSLEKLNLSHNNLSGSIPSCFEGMHGLSFIDMSYNELQCPVPNS-TTFRGASVEALKGNKGLCG 502 (849)
Q Consensus 428 ~--l~~l-p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~-~~~~~~~~~~~~~~~~~c~ 502 (849)
. +..+ |..+..+++|+.|+|++|++++..|..|..+++| .|++++|++++..|.. ..+.......+.+|+..|.
T Consensus 485 ~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 562 (606)
T 3t6q_A 485 FCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCT 562 (606)
T ss_dssp TSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECS
T ss_pred CCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCcccc
Confidence 6 4444 6789999999999999999999999999999999 9999999999877653 2334455566778887663
No 5
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=1.2e-53 Score=509.34 Aligned_cols=490 Identities=22% Similarity=0.231 Sum_probs=350.5
Q ss_pred cEEEEecCCCceeeeeCCccCCCCCCCCEEeCcCCccccCCCccccCCCCCCEeeCCCCcCcccccccccccCCCCCccc
Q 042123 6 RVINISLPNIGVNGTLHDFSFSSFPHLAYLDLTWNGFFGTIPPQISNLSNLRYLYLGSNQFSGNILAEVSSESSGGNLRY 85 (849)
Q Consensus 6 ~~~~~~~~~~~~~~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~ 85 (849)
+++.|+++.+++.+.. ...|..+++|++|+|++|++.++.|.+|+++++|++|+|++|++++ ....+|+++++
T Consensus 26 ~l~~L~Ls~n~l~~~~-~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~------l~~~~~~~l~~ 98 (680)
T 1ziw_A 26 NITVLNLTHNQLRRLP-AANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQ------LSDKTFAFCTN 98 (680)
T ss_dssp TCSEEECCSSCCCCCC-GGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCC------CCTTTTTTCTT
T ss_pred CCcEEECCCCCCCCcC-HHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCc------cChhhhccCCC
Confidence 6778888888877653 3368888999999999999988888889999999999999998873 23346788899
Q ss_pred cCeEeccCCcccccCCccCCCCCCCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccC--CCCCCCEEEc
Q 042123 86 MSRLVINDNSLSGFIPPHIGNLKFLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLG--KLKSLFDLQL 163 (849)
Q Consensus 86 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~L 163 (849)
|++|+|++|.++++.|..|+++++|++|+|++|++++..|..|.++++|++|++++|.+++..+..+. .+++|++|++
T Consensus 99 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L 178 (680)
T 1ziw_A 99 LTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLEL 178 (680)
T ss_dssp CSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEEC
T ss_pred CCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEEC
Confidence 99999999999887778889999999999999999888888888889999999999888876665543 4567777777
Q ss_pred CCCcccccCCcCCCCC---------------------------CCCCEEEccCCCCcCcCcccccCCCC--CCEEeccCC
Q 042123 164 NDNQLIGYIPRPFSNL---------------------------TSVSTLRLSRNDLFGSIPDEIGKMRS--LSVLDLNQN 214 (849)
Q Consensus 164 ~~N~l~~~~~~~~~~l---------------------------~~L~~L~Ls~N~l~~~~~~~~~~l~~--L~~L~L~~N 214 (849)
++|++.++.|..|..+ ++|++|++++|++.+..|..|.+++. |++|++++|
T Consensus 179 ~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n 258 (680)
T 1ziw_A 179 SSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYN 258 (680)
T ss_dssp TTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTS
T ss_pred CCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCC
Confidence 7777776666544432 23344444444444444444444432 555555555
Q ss_pred cCccCCCcCccCccccchhhhccccccCCCCcc---------------------------------hhhh-hhhhhhccC
Q 042123 215 QFKGVLPPSISNLTNLKELALLYNHLSGSIPPS---------------------------------LGNL-ILRQLLLSG 260 (849)
Q Consensus 215 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~---------------------------------~~~~-~L~~L~L~~ 260 (849)
++++..|..|..+++|++|+|++|.+.+..|.. +... .|++|++++
T Consensus 259 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~ 338 (680)
T 1ziw_A 259 NLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMED 338 (680)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCS
T ss_pred CcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCC
Confidence 554444444555555555555555444333322 2222 377777777
Q ss_pred cCCCCCCCcccCCCCCcceeeecc----------------------------cccccccCCCCCCcccccEEEccCcccc
Q 042123 261 NHFTGYLPYNICRGGALEIFTVSE----------------------------NHFQGTIPTSLRNCTSLIRVRLNGNNLT 312 (849)
Q Consensus 261 n~i~~~~~~~~~~~~~L~~L~l~~----------------------------N~l~~~~~~~~~~l~~L~~L~L~~n~l~ 312 (849)
|++++..+..|..+++|+.|++++ |++++..|..|..+++|+.|++++|.++
T Consensus 339 n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 418 (680)
T 1ziw_A 339 NDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIG 418 (680)
T ss_dssp CCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCE
T ss_pred CccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCc
Confidence 777777777676666665555544 4455555666667777777777777776
Q ss_pred Cchh-hhhCCCCCCCEEeccCccccCcccccCCCCCCCcEEeccCCccc--cCCCCCccccccccccccccccccccCch
Q 042123 313 GNIS-EALGIYPNLTFIDLSRNNFYGEISSNWGKFPKLGTLNVSMNNIT--GGLPREIGNSSQLQAFDLSLNHIVGEIPK 389 (849)
Q Consensus 313 ~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~--~~~p~~~~~l~~L~~L~L~~N~i~~~~~~ 389 (849)
+..+ ..+..+++|++|++++|++.+..+..|..+++|+.|++++|.++ +..|..|.++++|+.|+|++|++++..+.
T Consensus 419 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~ 498 (680)
T 1ziw_A 419 QELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDD 498 (680)
T ss_dssp EECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTT
T ss_pred cccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChh
Confidence 5333 56677777777777777777666667777777777777777765 45677888888888888888888877777
Q ss_pred hhcCCCCCcEEEccCccccccCc--------cccccccccccccccc--CCCCCh-hhhcccccceeccCCcccccCCCc
Q 042123 390 ELGKLNPLTKLILRGNQITGRLP--------KEIGSLTKLEYLDFSA--IGELPS-QICNMKSLEKLNLSHNNLSGSIPS 458 (849)
Q Consensus 390 ~~~~l~~L~~L~L~~N~l~~~~p--------~~~~~l~~L~~L~l~~--l~~lp~-~~~~l~~L~~L~L~~N~l~~~~p~ 458 (849)
.|..+++|++|+|++|++++..+ ..|.++++|++|+++. +..+|. .+.++++|+.|+|++|+|++..+.
T Consensus 499 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~ 578 (680)
T 1ziw_A 499 MLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPAS 578 (680)
T ss_dssp TTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTT
T ss_pred hhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHh
Confidence 88888888888888888875422 2377888888888875 677776 478888999999999999888888
Q ss_pred cccccCCCcEEeccCCccccCCCCCc--ccccCcccccccCCCccC
Q 042123 459 CFEGMHGLSFIDMSYNELQCPVPNST--TFRGASVEALKGNKGLCG 502 (849)
Q Consensus 459 ~~~~l~~L~~l~l~~N~l~~~~~~~~--~~~~~~~~~~~~~~~~c~ 502 (849)
.|..+++|+.|+|++|.+++..+... .+.......+.+|+..|.
T Consensus 579 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~ 624 (680)
T 1ziw_A 579 VFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCT 624 (680)
T ss_dssp TTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBC
T ss_pred HhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccC
Confidence 88888899999999998887665432 344555666778888775
No 6
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=5.5e-53 Score=503.61 Aligned_cols=470 Identities=21% Similarity=0.216 Sum_probs=362.5
Q ss_pred cEEEEecCCCceeeeeCCccCCCCCCCCEEeCcCCccccCCCccccCCCCCCEeeCCCCcCcccccccccccCCCCCccc
Q 042123 6 RVINISLPNIGVNGTLHDFSFSSFPHLAYLDLTWNGFFGTIPPQISNLSNLRYLYLGSNQFSGNILAEVSSESSGGNLRY 85 (849)
Q Consensus 6 ~~~~~~~~~~~~~~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~ 85 (849)
.++.|+++.+.+.+... .+|..+++|++|+|++|++.++.+.+|+++++|++|+|++|++++. ....|+++++
T Consensus 50 ~L~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~------~~~~~~~l~~ 122 (680)
T 1ziw_A 50 QLTSLDVGFNTISKLEP-ELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKI------KNNPFVKQKN 122 (680)
T ss_dssp TCSEEECCSSCCCCCCT-THHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCC------CSCTTTTCTT
T ss_pred cCcEEECCCCccCccCH-HHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCcc------ChhHccccCC
Confidence 45677777777665543 3677778888888888888777777788888888888888877632 2345677777
Q ss_pred cCeEeccCCcccccCCccCCCCCCCCEEEccCCcccCCCCCCCc--CCCCCceeeccCcccccccc--------------
Q 042123 86 MSRLVINDNSLSGFIPPHIGNLKFLSQLDLTNNKFSGPIPLSFD--NLSNLIFLYLYGNLLSGSIL-------------- 149 (849)
Q Consensus 86 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~--~l~~L~~L~L~~N~l~~~~~-------------- 149 (849)
|++|+|++|.+++..|..|.++++|++|++++|++++..+..|. .+++|++|++++|.+++..+
T Consensus 123 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 202 (680)
T 1ziw_A 123 LITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFL 202 (680)
T ss_dssp CCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEEC
T ss_pred CCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhc
Confidence 78888888877777777777777777777777777765554433 34566666666665554443
Q ss_pred -------------------------------------cccCCCCC--CCEEEcCCCcccccCCcCCCCCCCCCEEEccCC
Q 042123 150 -------------------------------------SSLGKLKS--LFDLQLNDNQLIGYIPRPFSNLTSVSTLRLSRN 190 (849)
Q Consensus 150 -------------------------------------~~~~~l~~--L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 190 (849)
..|.+++. |++|+|++|++.++.+..|..+++|++|+|++|
T Consensus 203 ~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 282 (680)
T 1ziw_A 203 NNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYN 282 (680)
T ss_dssp TTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred cccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCC
Confidence 34444433 788888888887777777888888888888888
Q ss_pred CCcCcCcccccCC---------------------------------CCCCEEeccCCcCccCCCcCccCccccchhhhcc
Q 042123 191 DLFGSIPDEIGKM---------------------------------RSLSVLDLNQNQFKGVLPPSISNLTNLKELALLY 237 (849)
Q Consensus 191 ~l~~~~~~~~~~l---------------------------------~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 237 (849)
++.+..|..|.++ ++|++|++++|+++++.+..|.++++|++|++++
T Consensus 283 ~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~ 362 (680)
T 1ziw_A 283 NIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSN 362 (680)
T ss_dssp CBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTT
T ss_pred ccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCC
Confidence 7776655544443 4444444444555544445555555555555555
Q ss_pred ccccCC-CC-cchhh---hhhhhhhccCcCCCCCCCcccCCCCCcceeeecccccccccC-CCCCCcccccEEEccCccc
Q 042123 238 NHLSGS-IP-PSLGN---LILRQLLLSGNHFTGYLPYNICRGGALEIFTVSENHFQGTIP-TSLRNCTSLIRVRLNGNNL 311 (849)
Q Consensus 238 N~l~~~-~p-~~~~~---~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~-~~~~~l~~L~~L~L~~n~l 311 (849)
|.+... ++ ..+.. ..|+.|++++|+++++.|..+..+++|+.|++++|.+.+.+| ..|.++++|++|++++|++
T Consensus 363 n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l 442 (680)
T 1ziw_A 363 SFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKY 442 (680)
T ss_dssp CBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSE
T ss_pred CchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCc
Confidence 543211 11 11111 247778888899999999999999999999999999987665 6899999999999999999
Q ss_pred cCchhhhhCCCCCCCEEeccCcccc--CcccccCCCCCCCcEEeccCCccccCCCCCccccccccccccccccccccCc-
Q 042123 312 TGNISEALGIYPNLTFIDLSRNNFY--GEISSNWGKFPKLGTLNVSMNNITGGLPREIGNSSQLQAFDLSLNHIVGEIP- 388 (849)
Q Consensus 312 ~~~~~~~~~~l~~L~~L~Ls~N~l~--~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~N~i~~~~~- 388 (849)
++..+..|..+++|+.|++++|.+. +..|..|..+++|+.|++++|.+++..+..|.++++|++|+|++|++++..+
T Consensus 443 ~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 522 (680)
T 1ziw_A 443 LQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKH 522 (680)
T ss_dssp EECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGST
T ss_pred ceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchh
Confidence 9999999999999999999999987 5678899999999999999999998888889999999999999999986532
Q ss_pred -------hhhcCCCCCcEEEccCccccccCccccccccccccccccc--CCCCChh-hhcccccceeccCCcccccCCCc
Q 042123 389 -------KELGKLNPLTKLILRGNQITGRLPKEIGSLTKLEYLDFSA--IGELPSQ-ICNMKSLEKLNLSHNNLSGSIPS 458 (849)
Q Consensus 389 -------~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~--l~~lp~~-~~~l~~L~~L~L~~N~l~~~~p~ 458 (849)
..|..+++|+.|+|++|+++...+..|.++++|++|+++. +..+|.. +.++++|+.|+|++|+|++..|.
T Consensus 523 ~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~ 602 (680)
T 1ziw_A 523 ANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKK 602 (680)
T ss_dssp TSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHH
T ss_pred hccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChh
Confidence 2488999999999999999965556799999999999985 7788875 68999999999999999999888
Q ss_pred ccc-ccCCCcEEeccCCccccCCCC
Q 042123 459 CFE-GMHGLSFIDMSYNELQCPVPN 482 (849)
Q Consensus 459 ~~~-~l~~L~~l~l~~N~l~~~~~~ 482 (849)
.|. .+++|+.+++++|||.|+|+.
T Consensus 603 ~~~~~~~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 603 VFGPAFRNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp HHHHHHTTCSEEECTTCCCCBCCCC
T ss_pred HhcccccccCEEEccCCCcccCCcc
Confidence 888 899999999999999999985
No 7
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=7.3e-53 Score=495.77 Aligned_cols=461 Identities=21% Similarity=0.205 Sum_probs=319.1
Q ss_pred cEEEEecCCCceeeeeCCccCCCCCCCCEEeCcCCccccCCCccccCCCCCCEeeCCCCcCcccccccccccCCCCCccc
Q 042123 6 RVINISLPNIGVNGTLHDFSFSSFPHLAYLDLTWNGFFGTIPPQISNLSNLRYLYLGSNQFSGNILAEVSSESSGGNLRY 85 (849)
Q Consensus 6 ~~~~~~~~~~~~~~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~ 85 (849)
.++.++++.+.+.+... .+|.++++|++|+|++|+++++.|.+|+++++|++|+|++|++++. .+..|+++++
T Consensus 33 ~l~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~------~p~~~~~l~~ 105 (606)
T 3vq2_A 33 STKNIDLSFNPLKILKS-YSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSF------SPGSFSGLTS 105 (606)
T ss_dssp TCCEEECTTSCCCEECT-TTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCC------CTTSSTTCTT
T ss_pred CcCEEECCCCCcCEeCh-hhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCccccc------ChhhcCCccc
Confidence 34555555555544333 2455555555555555555555555555555555555555555431 2233455555
Q ss_pred cCeEeccCCcccccCCccCCCCCCCCEEEccCCcccC-CCCCCCcCCCCCceeeccCcccccccccccCCCCCCC----E
Q 042123 86 MSRLVINDNSLSGFIPPHIGNLKFLSQLDLTNNKFSG-PIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLF----D 160 (849)
Q Consensus 86 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~----~ 160 (849)
|++|+|++|.+.+..+..|+++++|++|++++|++++ ..|..|.++++|++|++++|++++..+..|+.+++|+ .
T Consensus 106 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~ 185 (606)
T 3vq2_A 106 LENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLS 185 (606)
T ss_dssp CCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCE
T ss_pred CCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccce
Confidence 5555555555555544555555555555555555554 2355555555555555555555555555554444433 4
Q ss_pred EEcCCCcccccCCcCCCCCCCCCEEEccCCCCc-----------------------------------------------
Q 042123 161 LQLNDNQLIGYIPRPFSNLTSVSTLRLSRNDLF----------------------------------------------- 193 (849)
Q Consensus 161 L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~----------------------------------------------- 193 (849)
|++++|.+.++.+..|... +|++|++++|.+.
T Consensus 186 L~l~~n~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~ 264 (606)
T 3vq2_A 186 LDMSLNPIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTID 264 (606)
T ss_dssp EECTTCCCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEE
T ss_pred eeccCCCcceeCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHh
Confidence 5555555555555544444 5666666665442
Q ss_pred -----------CcCcccccCCCCCCEEeccCCcCccCCCcCccCccccchhhhccccccCCCCcchhhhhhhhhhccCcC
Q 042123 194 -----------GSIPDEIGKMRSLSVLDLNQNQFKGVLPPSISNLTNLKELALLYNHLSGSIPPSLGNLILRQLLLSGNH 262 (849)
Q Consensus 194 -----------~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~L~~n~ 262 (849)
+..|. +..+++|+.|++++|.+.. +| .+..+++|++|++++|.+ +.+|.. ....|+.|++++|+
T Consensus 265 ~l~l~~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~~-l~-~l~~~~~L~~L~l~~n~l-~~lp~~-~l~~L~~L~l~~n~ 339 (606)
T 3vq2_A 265 EFRLTYTNDFSDDIVK-FHCLANVSAMSLAGVSIKY-LE-DVPKHFKWQSLSIIRCQL-KQFPTL-DLPFLKSLTLTMNK 339 (606)
T ss_dssp EEEECCCTTCCGGGGS-CGGGTTCSEEEEESCCCCC-CC-CCCTTCCCSEEEEESCCC-SSCCCC-CCSSCCEEEEESCS
T ss_pred heeccccccccccccc-cccCCCCCEEEecCccchh-hh-hccccccCCEEEcccccC-cccccC-CCCccceeeccCCc
Confidence 11222 4455667777777777653 34 677777888888888887 467744 44458888888885
Q ss_pred CCCCCCcccCCCCCcceeeeccccccccc--CCCCCCcccccEEEccCccccCchhhhhCCCCCCCEEeccCccccCccc
Q 042123 263 FTGYLPYNICRGGALEIFTVSENHFQGTI--PTSLRNCTSLIRVRLNGNNLTGNISEALGIYPNLTFIDLSRNNFYGEIS 340 (849)
Q Consensus 263 i~~~~~~~~~~~~~L~~L~l~~N~l~~~~--~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 340 (849)
..+.. .+..+++|+.|++++|++++.. |..+..+++|+.|++++|.+++. +..+..+++|+.|++++|++.+..+
T Consensus 340 ~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~-~~~~~~l~~L~~L~l~~n~l~~~~~ 416 (606)
T 3vq2_A 340 GSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAIIM-SANFMGLEELQHLDFQHSTLKRVTE 416 (606)
T ss_dssp SCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEEE-CCCCTTCTTCCEEECTTSEEESTTT
T ss_pred Cccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCccccc-hhhccCCCCCCeeECCCCccCCccC
Confidence 54433 5667888888888888887653 67778888888999988888854 4778888899999999999887776
Q ss_pred -ccCCCCCCCcEEeccCCccccCCCCCccccccccccccccccccc-cCchhhcCCCCCcEEEccCccccccCccccccc
Q 042123 341 -SNWGKFPKLGTLNVSMNNITGGLPREIGNSSQLQAFDLSLNHIVG-EIPKELGKLNPLTKLILRGNQITGRLPKEIGSL 418 (849)
Q Consensus 341 -~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~N~i~~-~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 418 (849)
..|..+++|++|++++|.+++..|..+.++++|+.|++++|++++ .+|..|..+++|+.|+|++|++++..|..|+.+
T Consensus 417 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 496 (606)
T 3vq2_A 417 FSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTL 496 (606)
T ss_dssp TTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTC
T ss_pred hhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhccc
Confidence 678888999999999999988888889999999999999999987 478888999999999999999998888889999
Q ss_pred cccccccccc--CCCC-ChhhhcccccceeccCCcccccCCCccccccC-CCcEEeccCCccccCCCCC
Q 042123 419 TKLEYLDFSA--IGEL-PSQICNMKSLEKLNLSHNNLSGSIPSCFEGMH-GLSFIDMSYNELQCPVPNS 483 (849)
Q Consensus 419 ~~L~~L~l~~--l~~l-p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~l~l~~N~l~~~~~~~ 483 (849)
++|++|++++ +..+ |..+.++++|+.|+|++|+|+ .+|..+..++ +|+.|++++|+|.|+|+..
T Consensus 497 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~~~ 564 (606)
T 3vq2_A 497 HRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICEHQ 564 (606)
T ss_dssp TTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSSTTH
T ss_pred ccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCccH
Confidence 9999999886 4444 778888999999999999998 5666688887 5999999999999988763
No 8
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=7.9e-52 Score=503.13 Aligned_cols=460 Identities=23% Similarity=0.239 Sum_probs=275.2
Q ss_pred CCCCCcEEEEecCCCceeeeeCCccCCCCCCCCEEeCcCCccccCCCccccCCCCCCEeeCCCCcCcccccccccccCCC
Q 042123 1 CNDAGRVINISLPNIGVNGTLHDFSFSSFPHLAYLDLTWNGFFGTIPPQISNLSNLRYLYLGSNQFSGNILAEVSSESSG 80 (849)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~ 80 (849)
|.-.|+++ ++..+++..... -.++|++|||++|.|+++.+..|.++++|++|+|++|.+.+. ..+.+|
T Consensus 2 C~~~~~~~--dcs~~~L~~vP~-----lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~-----i~~~~f 69 (844)
T 3j0a_A 2 CSFDGRIA--FYRFCNLTQVPQ-----VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLT-----IDKEAF 69 (844)
T ss_dssp CBTTTEEE--EESCCCSSCCCS-----SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCE-----ECTTTT
T ss_pred ceEeceEE--EccCCCCCCCCC-----CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccc-----cCHHHh
Confidence 55555443 334555444322 235666666666666666666666666666666666644321 233455
Q ss_pred CCccccCeEeccCCcccccCCccCCCCCCCCEEEccCCcccCCCCCC--CcCCCCCceeeccCcccccccc-cccCCCCC
Q 042123 81 GNLRYMSRLVINDNSLSGFIPPHIGNLKFLSQLDLTNNKFSGPIPLS--FDNLSNLIFLYLYGNLLSGSIL-SSLGKLKS 157 (849)
Q Consensus 81 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~--~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~ 157 (849)
+++++|+.|+|++|.|.+..|..|.++++|++|+|++|++++..|.. |.++++|++|+|++|.+++..+ ..|+++++
T Consensus 70 ~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~ 149 (844)
T 3j0a_A 70 RNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNS 149 (844)
T ss_dssp SSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSS
T ss_pred cCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCC
Confidence 66666666666666666666666666666666666666666544333 6666666666666666665433 35666666
Q ss_pred CCEEEcCCCcccccCCcCCCCC--CCCCEEEccCCCCcCcCcccccCC--------------------------------
Q 042123 158 LFDLQLNDNQLIGYIPRPFSNL--TSVSTLRLSRNDLFGSIPDEIGKM-------------------------------- 203 (849)
Q Consensus 158 L~~L~L~~N~l~~~~~~~~~~l--~~L~~L~Ls~N~l~~~~~~~~~~l-------------------------------- 203 (849)
|++|+|++|.+.++.+..|..+ ++|++|+|+.|.+.+..|..+..+
T Consensus 150 L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~ 229 (844)
T 3j0a_A 150 LKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAIS 229 (844)
T ss_dssp CCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSC
T ss_pred CCEEECCCCcCCeeCHHHcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcC
Confidence 6666666666666555555544 445555555554444443333333
Q ss_pred ------------------------------------CCCCEEeccCCcCccCCCcCccCccccchhhhccccccCCCCcc
Q 042123 204 ------------------------------------RSLSVLDLNQNQFKGVLPPSISNLTNLKELALLYNHLSGSIPPS 247 (849)
Q Consensus 204 ------------------------------------~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~ 247 (849)
++|+.|++++|.+.+..+..|..+++|+.|+|++|.+++..|..
T Consensus 230 ~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~ 309 (844)
T 3j0a_A 230 KSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEA 309 (844)
T ss_dssp SCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTT
T ss_pred cccccceecccccccccccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHH
Confidence 34555555555555444555555555555555555555444444
Q ss_pred hhhh-hhhhhhccCcCCCCCCCcccCCCCCcceeeecccccccccCCCCCCcccccEEEccCccccCchhhhhCCCCCCC
Q 042123 248 LGNL-ILRQLLLSGNHFTGYLPYNICRGGALEIFTVSENHFQGTIPTSLRNCTSLIRVRLNGNNLTGNISEALGIYPNLT 326 (849)
Q Consensus 248 ~~~~-~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 326 (849)
+..+ .|++|+|++|++++..|..|..+++|+.|++++|++.+..+..|.++++|+.|+|++|.+++.. .+++|+
T Consensus 310 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~-----~~~~L~ 384 (844)
T 3j0a_A 310 FYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIH-----FIPSIP 384 (844)
T ss_dssp TTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCS-----SCCSCS
T ss_pred hcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCccc-----CCCCcc
Confidence 4433 2555555555555555555555555555555555555444445555555555555555554321 134444
Q ss_pred EEeccCccccCcccc----------------------cCCCCCCCcEEeccCCccccCCCC-Cccccccccccccccccc
Q 042123 327 FIDLSRNNFYGEISS----------------------NWGKFPKLGTLNVSMNNITGGLPR-EIGNSSQLQAFDLSLNHI 383 (849)
Q Consensus 327 ~L~Ls~N~l~~~~~~----------------------~~~~l~~L~~L~Ls~N~i~~~~p~-~~~~l~~L~~L~L~~N~i 383 (849)
.|++++|++... |. .+..+++|+.|+|++|++++..+. .+..+++|+.|+|++|.+
T Consensus 385 ~L~l~~N~l~~l-~~~~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l 463 (844)
T 3j0a_A 385 DIFLSGNKLVTL-PKINLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENML 463 (844)
T ss_dssp EEEEESCCCCCC-CCCCTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCC
T ss_pred hhccCCCCcccc-cccccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCcc
Confidence 444444444321 11 123567777777777777744332 345567778888888877
Q ss_pred c-----ccCchhhcCCCCCcEEEccCccccccCccccccccccccccccc--CCCCChhhhcccccceeccCCcccccCC
Q 042123 384 V-----GEIPKELGKLNPLTKLILRGNQITGRLPKEIGSLTKLEYLDFSA--IGELPSQICNMKSLEKLNLSHNNLSGSI 456 (849)
Q Consensus 384 ~-----~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~--l~~lp~~~~~l~~L~~L~L~~N~l~~~~ 456 (849)
+ +..+..|..+++|+.|+|++|++++..|..|..+++|++|+++. +..+|..... ++|+.|+|++|+|++..
T Consensus 464 ~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~-~~L~~L~Ls~N~l~~~~ 542 (844)
T 3j0a_A 464 QLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP-ANLEILDISRNQLLAPN 542 (844)
T ss_dssp SSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC-SCCCEEEEEEECCCCCC
T ss_pred ccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh-ccccEEECCCCcCCCCC
Confidence 6 33445677788888888888888877777788888888888875 5566554333 77888888888888887
Q ss_pred CccccccCCCcEEeccCCccccCCCC
Q 042123 457 PSCFEGMHGLSFIDMSYNELQCPVPN 482 (849)
Q Consensus 457 p~~~~~l~~L~~l~l~~N~l~~~~~~ 482 (849)
|..|. +|+.+++++|||.|+|+.
T Consensus 543 ~~~~~---~L~~l~l~~Np~~C~c~~ 565 (844)
T 3j0a_A 543 PDVFV---SLSVLDITHNKFICECEL 565 (844)
T ss_dssp SCCCS---SCCEEEEEEECCCCSSSC
T ss_pred hhHhC---CcCEEEecCCCccccccc
Confidence 77654 678888888888888875
No 9
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=2.9e-52 Score=506.92 Aligned_cols=436 Identities=23% Similarity=0.194 Sum_probs=316.5
Q ss_pred cEEEEecCCCceeeeeCCccCCCCCCCCEEeCcCCcc-ccCCCccccCCCCCCEeeCCCCcCcccccccccccCCCCCcc
Q 042123 6 RVINISLPNIGVNGTLHDFSFSSFPHLAYLDLTWNGF-FGTIPPQISNLSNLRYLYLGSNQFSGNILAEVSSESSGGNLR 84 (849)
Q Consensus 6 ~~~~~~~~~~~~~~~l~~~~~~~l~~L~~L~L~~n~i-~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~ 84 (849)
.++.|+++.+.+.+... .+|..+++|++|||++|.+ ..+.|.+|+++++|++|+|++|++++. .+..|++++
T Consensus 25 ~l~~LdLs~N~i~~i~~-~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~------~p~~~~~l~ 97 (844)
T 3j0a_A 25 TTERLLLSFNYIRTVTA-SSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFL------HPDAFQGLF 97 (844)
T ss_dssp TCCEEEEESCCCCEECS-SSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEE------CTTSSCSCS
T ss_pred CcCEEECCCCcCCccCh-hHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCccc------CHhHccCCc
Confidence 45566666666554432 2456666666666666533 233355566666666666666665421 233445555
Q ss_pred ccCeEeccCCcccccCCcc--CCCCCCCCEEEccCCcccCCCC-CCCcCCCCCceeeccCcccccccc------------
Q 042123 85 YMSRLVINDNSLSGFIPPH--IGNLKFLSQLDLTNNKFSGPIP-LSFDNLSNLIFLYLYGNLLSGSIL------------ 149 (849)
Q Consensus 85 ~L~~L~l~~n~l~~~~~~~--~~~l~~L~~L~Ls~n~i~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~------------ 149 (849)
+|++|+|++|.+++..|.. |+++++|++|+|++|++++..+ ..|.++++|++|+|++|.+++..+
T Consensus 98 ~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~ 177 (844)
T 3j0a_A 98 HLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLS 177 (844)
T ss_dssp SCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSC
T ss_pred ccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccc
Confidence 5666666666555433332 5555556666666665554433 345555555555555555544433
Q ss_pred --------------cccCCCCC------CCEEEcCCCcccccCCcCC---------------------------------
Q 042123 150 --------------SSLGKLKS------LFDLQLNDNQLIGYIPRPF--------------------------------- 176 (849)
Q Consensus 150 --------------~~~~~l~~------L~~L~L~~N~l~~~~~~~~--------------------------------- 176 (849)
..+..+.+ |+.|+|++|.+.+..+..+
T Consensus 178 ~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~ 257 (844)
T 3j0a_A 178 FFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQ 257 (844)
T ss_dssp CCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGG
T ss_pred eEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCCh
Confidence 33333333 7888888876654333222
Q ss_pred ---CC--CCCCCEEEccCCCCcCcCcccccCCCCCCEEeccCCcCccCCCcCccCccccchhhhccccccCCCCcchhhh
Q 042123 177 ---SN--LTSVSTLRLSRNDLFGSIPDEIGKMRSLSVLDLNQNQFKGVLPPSISNLTNLKELALLYNHLSGSIPPSLGNL 251 (849)
Q Consensus 177 ---~~--l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~ 251 (849)
.+ .++|++|+|++|.+.+..+..|..+++|+.|+|++|++++..|..|.++++|++|+|++|.+++..|..+..+
T Consensus 258 ~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 337 (844)
T 3j0a_A 258 NTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGL 337 (844)
T ss_dssp TTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSC
T ss_pred hhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCC
Confidence 22 2679999999999998889999999999999999999999999999999999999999999997778888766
Q ss_pred -hhhhhhccCcCCCCCCCcccCCCCCcceeeecccccccccCCCCCCcccccEEEccCccccCch---------------
Q 042123 252 -ILRQLLLSGNHFTGYLPYNICRGGALEIFTVSENHFQGTIPTSLRNCTSLIRVRLNGNNLTGNI--------------- 315 (849)
Q Consensus 252 -~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~--------------- 315 (849)
.|+.|++++|++.++.+..|..+++|+.|++++|.+++.. .+++|+.|++++|+++..+
T Consensus 338 ~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~-----~~~~L~~L~l~~N~l~~l~~~~~~l~~L~ls~N~ 412 (844)
T 3j0a_A 338 PKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIH-----FIPSIPDIFLSGNKLVTLPKINLTANLIHLSENR 412 (844)
T ss_dssp TTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCS-----SCCSCSEEEEESCCCCCCCCCCTTCCEEECCSCC
T ss_pred CCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCccc-----CCCCcchhccCCCCcccccccccccceeecccCc
Confidence 4999999999999999999999999999999999998532 2556666666666555321
Q ss_pred ------hhhhCCCCCCCEEeccCccccCcccc-cCCCCCCCcEEeccCCccc-----cCCCCCccccccccccccccccc
Q 042123 316 ------SEALGIYPNLTFIDLSRNNFYGEISS-NWGKFPKLGTLNVSMNNIT-----GGLPREIGNSSQLQAFDLSLNHI 383 (849)
Q Consensus 316 ------~~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~Ls~N~i~-----~~~p~~~~~l~~L~~L~L~~N~i 383 (849)
+..+..+++|+.|+|++|++.+..+. .+..+++|+.|+|++|.++ +..+..|.++++|+.|+|++|++
T Consensus 413 l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l 492 (844)
T 3j0a_A 413 LENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYL 492 (844)
T ss_dssp CCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHH
T ss_pred cccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcc
Confidence 22355889999999999999865443 4567899999999999997 34456789999999999999999
Q ss_pred cccCchhhcCCCCCcEEEccCccccccCccccccccccccccccc--CCCCChhhhcccccceeccCCcccccCCC
Q 042123 384 VGEIPKELGKLNPLTKLILRGNQITGRLPKEIGSLTKLEYLDFSA--IGELPSQICNMKSLEKLNLSHNNLSGSIP 457 (849)
Q Consensus 384 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~--l~~lp~~~~~l~~L~~L~L~~N~l~~~~p 457 (849)
++..|..|..+++|+.|+|++|+|++..|..+. ++|+.||++. +..+++. .+.+|+.|++++|.+....+
T Consensus 493 ~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~--~~~~L~~l~l~~Np~~C~c~ 564 (844)
T 3j0a_A 493 NSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPD--VFVSLSVLDITHNKFICECE 564 (844)
T ss_dssp TTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSC--CCSSCCEEEEEEECCCCSSS
T ss_pred cccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChh--HhCCcCEEEecCCCcccccc
Confidence 999999999999999999999999987777776 8999999986 4444332 24589999999999986443
No 10
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=9.3e-52 Score=486.39 Aligned_cols=475 Identities=19% Similarity=0.190 Sum_probs=408.8
Q ss_pred EEecCCCceeeeeCCccCCCCCCCCEEeCcCCccccCCCccccCCCCCCEeeCCCCcCcccccccccccCCCCCccccCe
Q 042123 9 NISLPNIGVNGTLHDFSFSSFPHLAYLDLTWNGFFGTIPPQISNLSNLRYLYLGSNQFSGNILAEVSSESSGGNLRYMSR 88 (849)
Q Consensus 9 ~~~~~~~~~~~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~ 88 (849)
.+++.+.++.....+ + .+++++|+|++|+++++.+..|.++++|++|+|++|++++ ..+.+|+++++|++
T Consensus 15 ~~~c~~~~l~~ip~~--~--~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~------i~~~~~~~l~~L~~ 84 (606)
T 3vq2_A 15 TYQCMDQKLSKVPDD--I--PSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIET------IEDKAWHGLHHLSN 84 (606)
T ss_dssp EEECTTSCCSSCCTT--S--CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCE------ECTTTTTTCTTCCE
T ss_pred ceEccCCCcccCCCC--C--CCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccc------cCHHHhhchhhcCE
Confidence 477888887554333 2 3789999999999999999999999999999999999974 34556789999999
Q ss_pred EeccCCcccccCCccCCCCCCCCEEEccCCcccCCCCCCCcCCCCCceeeccCccccc-ccccccCCCCCCCEEEcCCCc
Q 042123 89 LVINDNSLSGFIPPHIGNLKFLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSG-SILSSLGKLKSLFDLQLNDNQ 167 (849)
Q Consensus 89 L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~N~ 167 (849)
|+|++|.+++..|..|+++++|++|+|++|+++++.+..|.++++|++|++++|.+++ .+|..|+++++|++|+|++|+
T Consensus 85 L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~ 164 (606)
T 3vq2_A 85 LILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNY 164 (606)
T ss_dssp EECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSC
T ss_pred eECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCc
Confidence 9999999999889999999999999999999998888999999999999999999986 468999999999999999999
Q ss_pred ccccCCcCCCCCCCCC----EEEccCCCCcCcCcccccCCCCCCEEeccCCcCc--------------------------
Q 042123 168 LIGYIPRPFSNLTSVS----TLRLSRNDLFGSIPDEIGKMRSLSVLDLNQNQFK-------------------------- 217 (849)
Q Consensus 168 l~~~~~~~~~~l~~L~----~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-------------------------- 217 (849)
++++.+..|..+++|+ +|++++|++++..+..+... +|+.|++++|.+.
T Consensus 165 l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~ 243 (606)
T 3vq2_A 165 IQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKD 243 (606)
T ss_dssp CCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTT
T ss_pred ceecChhhhhhhhccccccceeeccCCCcceeCcccccCc-eeeeeeccCCccchhHHHHHhcccccccccccccccccc
Confidence 9999999998887776 89999999996666666554 8999999998764
Q ss_pred --------------------------------cCCCcCccCccccchhhhccccccCCCCcchhhh-hhhhhhccCcCCC
Q 042123 218 --------------------------------GVLPPSISNLTNLKELALLYNHLSGSIPPSLGNL-ILRQLLLSGNHFT 264 (849)
Q Consensus 218 --------------------------------~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~-~L~~L~L~~n~i~ 264 (849)
+..|. +..+++|+.|++++|.+. .+| .+... .|+.|++++|.+
T Consensus 244 ~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~-~l~-~l~~~~~L~~L~l~~n~l- 319 (606)
T 3vq2_A 244 ERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVK-FHCLANVSAMSLAGVSIK-YLE-DVPKHFKWQSLSIIRCQL- 319 (606)
T ss_dssp SCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGS-CGGGTTCSEEEEESCCCC-CCC-CCCTTCCCSEEEEESCCC-
T ss_pred CCcccccChHHhhhhhhccHhheeccccccccccccc-cccCCCCCEEEecCccch-hhh-hccccccCCEEEcccccC-
Confidence 12232 677888999999999986 566 44444 599999999999
Q ss_pred CCCCcccCCCCCcceeeecccccccccCCCCCCcccccEEEccCccccCch--hhhhCCCCCCCEEeccCccccCccccc
Q 042123 265 GYLPYNICRGGALEIFTVSENHFQGTIPTSLRNCTSLIRVRLNGNNLTGNI--SEALGIYPNLTFIDLSRNNFYGEISSN 342 (849)
Q Consensus 265 ~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~--~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 342 (849)
+.+| .+ .+++|+.|++++|+..+.. .+..+++|++|++++|++++.. +..+..+++|++|+|++|.+.+ +|..
T Consensus 320 ~~lp-~~-~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~ 394 (606)
T 3vq2_A 320 KQFP-TL-DLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSAN 394 (606)
T ss_dssp SSCC-CC-CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCC
T ss_pred cccc-cC-CCCccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhh
Confidence 5666 45 8899999999999665433 6778999999999999999764 7889999999999999999985 5688
Q ss_pred CCCCCCCcEEeccCCccccCCC-CCccccccccccccccccccccCchhhcCCCCCcEEEccCccccc-cCccccccccc
Q 042123 343 WGKFPKLGTLNVSMNNITGGLP-REIGNSSQLQAFDLSLNHIVGEIPKELGKLNPLTKLILRGNQITG-RLPKEIGSLTK 420 (849)
Q Consensus 343 ~~~l~~L~~L~Ls~N~i~~~~p-~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~ 420 (849)
|..+++|+.|++++|.+++..| ..+.++++|+.|++++|.+++..|..|..+++|++|++++|++++ .+|..|+.+++
T Consensus 395 ~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~ 474 (606)
T 3vq2_A 395 FMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTN 474 (606)
T ss_dssp CTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTT
T ss_pred ccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCC
Confidence 9999999999999999998877 689999999999999999999999999999999999999999997 47999999999
Q ss_pred cccccccc--CCCC-ChhhhcccccceeccCCcccccCCCccccccCCCcEEeccCCccccCCCCCcccc-cCccccccc
Q 042123 421 LEYLDFSA--IGEL-PSQICNMKSLEKLNLSHNNLSGSIPSCFEGMHGLSFIDMSYNELQCPVPNSTTFR-GASVEALKG 496 (849)
Q Consensus 421 L~~L~l~~--l~~l-p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~-~~~~~~~~~ 496 (849)
|++|++++ +..+ |..+..+++|+.|+|++|++++..|..|..+++|+.|++++|+++...+.-..+. ......+.+
T Consensus 475 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~p~~~~~l~~~L~~l~l~~ 554 (606)
T 3vq2_A 475 LTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTN 554 (606)
T ss_dssp CCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCCEESCGGGSCTTCCEEECCS
T ss_pred CCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCcccCHhHhhhcccCcEEEccC
Confidence 99999987 4444 6779999999999999999999999999999999999999999995433322222 244556778
Q ss_pred CCCccCC
Q 042123 497 NKGLCGS 503 (849)
Q Consensus 497 ~~~~c~~ 503 (849)
|+..|.-
T Consensus 555 N~~~c~c 561 (606)
T 3vq2_A 555 NSVACIC 561 (606)
T ss_dssp CCCCCSS
T ss_pred CCcccCC
Confidence 8877743
No 11
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=9.4e-52 Score=482.92 Aligned_cols=458 Identities=20% Similarity=0.220 Sum_probs=398.5
Q ss_pred EEecCCCceeeeeCCccCCCCCCCCEEeCcCCccccCCCccccCCCCCCEeeCCCCcCcccccccccccCCCCCccccCe
Q 042123 9 NISLPNIGVNGTLHDFSFSSFPHLAYLDLTWNGFFGTIPPQISNLSNLRYLYLGSNQFSGNILAEVSSESSGGNLRYMSR 88 (849)
Q Consensus 9 ~~~~~~~~~~~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~ 88 (849)
.+++.+.++...... + .+++++|||++|+++++.+.+|.++++|++|+|++|++++ ....+|+++++|++
T Consensus 11 ~~~c~~~~l~~ip~~--l--~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~------i~~~~~~~l~~L~~ 80 (570)
T 2z63_A 11 TYQCMELNFYKIPDN--L--PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQT------IEDGAYQSLSHLST 80 (570)
T ss_dssp EEECCSSCCSSCCSS--S--CSSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCE------ECTTTTTTCTTCCE
T ss_pred EEEeCCCCccccCCC--c--cccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCc------cCcccccCchhCCE
Confidence 366677776544332 2 3579999999999998888899999999999999999874 34456788999999
Q ss_pred EeccCCcccccCCccCCCCCCCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccc-cccccCCCCCCCEEEcCCCc
Q 042123 89 LVINDNSLSGFIPPHIGNLKFLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGS-ILSSLGKLKSLFDLQLNDNQ 167 (849)
Q Consensus 89 L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~L~~N~ 167 (849)
|+|++|.+++..|..|.++++|++|++++|+++++.+..|.++++|++|++++|.+++. .|..|+++++|++|++++|+
T Consensus 81 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~ 160 (570)
T 2z63_A 81 LILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNK 160 (570)
T ss_dssp EECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSC
T ss_pred EeCcCCcCCccCHhhhcCccccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCc
Confidence 99999999988888999999999999999999987777899999999999999999863 58889999999999999999
Q ss_pred ccccCCcCCCCCCCC----CEEEccCCCCcCcCcccccCCCCCCEEeccCC-----------------------------
Q 042123 168 LIGYIPRPFSNLTSV----STLRLSRNDLFGSIPDEIGKMRSLSVLDLNQN----------------------------- 214 (849)
Q Consensus 168 l~~~~~~~~~~l~~L----~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N----------------------------- 214 (849)
+.++.+..|..+++| ++|++++|.+.+..|..|..+ +|+.|++++|
T Consensus 161 l~~~~~~~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~ 239 (570)
T 2z63_A 161 IQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRN 239 (570)
T ss_dssp CCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCC
T ss_pred cceecHHHccchhccchhhhhcccCCCCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccC
Confidence 999888888888888 899999999987777777655 7888888876
Q ss_pred -----------------------------cCccCCCcCccCccccchhhhccccccCCCCcchhhhhhhhhhccCcCCCC
Q 042123 215 -----------------------------QFKGVLPPSISNLTNLKELALLYNHLSGSIPPSLGNLILRQLLLSGNHFTG 265 (849)
Q Consensus 215 -----------------------------~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~L~~n~i~~ 265 (849)
.+.+..|..+..+++|++|++++|.+. .+|..+....|+.|++++|.+..
T Consensus 240 ~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~~L~~L~l~~n~~~~ 318 (570)
T 2z63_A 240 EGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNFGWQHLELVNCKFGQ 318 (570)
T ss_dssp CSSCEECCTTTTGGGGGSEEEEEEEEETTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCCCCSEEEEESCBCSS
T ss_pred chhhhhcchhhhccccccchhhhhhhcchhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccCCccEEeeccCcccc
Confidence 344556778888999999999999998 68887776689999999999984
Q ss_pred CCCcccCCCCCcceeeecccccccccCCCCCCcccccEEEccCccccCch--hhhhCCCCCCCEEeccCccccCcccccC
Q 042123 266 YLPYNICRGGALEIFTVSENHFQGTIPTSLRNCTSLIRVRLNGNNLTGNI--SEALGIYPNLTFIDLSRNNFYGEISSNW 343 (849)
Q Consensus 266 ~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~--~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 343 (849)
+|. ..+++|+.|++++|.+.+..+. ..+++|+.|++++|++++.. +..+..+++|++|++++|.+.+..+. +
T Consensus 319 -l~~--~~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~ 392 (570)
T 2z63_A 319 -FPT--LKLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-F 392 (570)
T ss_dssp -CCB--CBCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-E
T ss_pred -cCc--ccccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-c
Confidence 443 4678999999999999876655 78899999999999998665 77899999999999999999976555 9
Q ss_pred CCCCCCcEEeccCCccccCCC-CCccccccccccccccccccccCchhhcCCCCCcEEEccCcccc-ccCcccccccccc
Q 042123 344 GKFPKLGTLNVSMNNITGGLP-REIGNSSQLQAFDLSLNHIVGEIPKELGKLNPLTKLILRGNQIT-GRLPKEIGSLTKL 421 (849)
Q Consensus 344 ~~l~~L~~L~Ls~N~i~~~~p-~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L 421 (849)
..+++|++|++++|.+++..| ..+.++++|++|++++|.+.+..|..|..+++|++|+|++|+++ +.+|..+..+++|
T Consensus 393 ~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L 472 (570)
T 2z63_A 393 LGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNL 472 (570)
T ss_dssp ETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTC
T ss_pred cccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCC
Confidence 999999999999999997766 57899999999999999999999999999999999999999998 6799999999999
Q ss_pred ccccccc--CCCC-ChhhhcccccceeccCCcccccCCCccccccCCCcEEeccCCccccCCCCCc
Q 042123 422 EYLDFSA--IGEL-PSQICNMKSLEKLNLSHNNLSGSIPSCFEGMHGLSFIDMSYNELQCPVPNST 484 (849)
Q Consensus 422 ~~L~l~~--l~~l-p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~ 484 (849)
++|+++. +..+ |..+..+++|+.|+|++|++++..|..|..+++|+.|++++|+|+|.||...
T Consensus 473 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~ 538 (570)
T 2z63_A 473 TFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRID 538 (570)
T ss_dssp CEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTH
T ss_pred CEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcchH
Confidence 9999986 5555 7789999999999999999999999999999999999999999999999753
No 12
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=1.1e-51 Score=485.25 Aligned_cols=449 Identities=19% Similarity=0.268 Sum_probs=306.5
Q ss_pred CCCCCcEEEEecCCCceeeeeCCccCCCCCCCCEEeCcCCcc------cc------CCCccccCCCCCCEeeCCCCcCcc
Q 042123 1 CNDAGRVINISLPNIGVNGTLHDFSFSSFPHLAYLDLTWNGF------FG------TIPPQISNLSNLRYLYLGSNQFSG 68 (849)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~L~~L~L~~n~i------~~------~~~~~~~~l~~L~~L~L~~N~l~~ 68 (849)
|+..|+|++|+++.+++.|++++ +|..+++|++|||++|.+ .+ .+|... +..|+ +++++|.+.+
T Consensus 77 C~~~~~V~~L~L~~~~l~g~lp~-~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~ 152 (636)
T 4eco_A 77 LNSNGRVTGLSLEGFGASGRVPD-AIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDY 152 (636)
T ss_dssp ECTTCCEEEEECTTSCCEEEECG-GGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCC
T ss_pred EcCCCCEEEEEecCcccCCcCCh-HHhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhcc
Confidence 77779999999999999999995 899999999999999976 22 223222 44566 7777777766
Q ss_pred ccccccccc-------------CCCCCccccCeEecc--CCcccccCCccCCCCCCCCEEEccCCcccCC----------
Q 042123 69 NILAEVSSE-------------SSGGNLRYMSRLVIN--DNSLSGFIPPHIGNLKFLSQLDLTNNKFSGP---------- 123 (849)
Q Consensus 69 ~~~~~~~~~-------------~~~~~l~~L~~L~l~--~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~---------- 123 (849)
.++..+... ........++.+.+. .|.+++ +|..|+++++|++|+|++|++++.
T Consensus 153 ~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~ 231 (636)
T 4eco_A 153 DPREDFSDLIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENEN 231 (636)
T ss_dssp CGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTT
T ss_pred CchhhHHHHHHHHhhcCccccccccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccc
Confidence 554433210 000111122222222 577877 777888888888888888888864
Q ss_pred -------CCCCCc--CCCCCceeeccCcccccccccccCCCCCCCEEEcCCCc-ccc-cCCcCCCCC------CCCCEEE
Q 042123 124 -------IPLSFD--NLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLNDNQ-LIG-YIPRPFSNL------TSVSTLR 186 (849)
Q Consensus 124 -------~~~~~~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~-l~~-~~~~~~~~l------~~L~~L~ 186 (849)
+|..+. ++++|++|+|++|.+.+.+|..|+++++|++|+|++|+ +++ ..|..+..+ ++|++|+
T Consensus 232 ~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~ 311 (636)
T 4eco_A 232 SEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIY 311 (636)
T ss_dssp SHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEE
T ss_pred cchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEE
Confidence 777777 88888888888888887888888888888888888887 776 566666655 7888888
Q ss_pred ccCCCCcCcCcc--cccCCCCCCEEeccCCcCccCCCcCccCccccchhhhccccccCCCCcchhhh-h-hhhhhccCcC
Q 042123 187 LSRNDLFGSIPD--EIGKMRSLSVLDLNQNQFKGVLPPSISNLTNLKELALLYNHLSGSIPPSLGNL-I-LRQLLLSGNH 262 (849)
Q Consensus 187 Ls~N~l~~~~~~--~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~-~-L~~L~L~~n~ 262 (849)
|++|+++ .+|. .+.++++|++|++++|++++.+| .|..+++|++|+|++|.++ .+|..+..+ . |++|++++|+
T Consensus 312 L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~ 388 (636)
T 4eco_A 312 IGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNK 388 (636)
T ss_dssp CCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSC
T ss_pred CCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCc
Confidence 8888887 6777 78888888888888888886677 7888888888888888887 666655544 3 6666666666
Q ss_pred CCCCCCcccCCCC--CcceeeecccccccccCCCCC-------CcccccEEEccCccccCchhhhhCCCCCCCEEeccCc
Q 042123 263 FTGYLPYNICRGG--ALEIFTVSENHFQGTIPTSLR-------NCTSLIRVRLNGNNLTGNISEALGIYPNLTFIDLSRN 333 (849)
Q Consensus 263 i~~~~~~~~~~~~--~L~~L~l~~N~l~~~~~~~~~-------~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N 333 (849)
++ .+|..+.... +|+.|++++|++++..|..+. .+++|+.|++++|++++.++..+..+++|++|+|++|
T Consensus 389 l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N 467 (636)
T 4eco_A 389 LK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGN 467 (636)
T ss_dssp CS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSS
T ss_pred Cc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCC
Confidence 66 4555555443 666666666666666666665 5556666666666666555555555666666666666
Q ss_pred cccCcccccCCCCC-------CCcEEeccCCccccCCCCCcc--ccccccccccccccccccCchhhcCCCCCcEEEccC
Q 042123 334 NFYGEISSNWGKFP-------KLGTLNVSMNNITGGLPREIG--NSSQLQAFDLSLNHIVGEIPKELGKLNPLTKLILRG 404 (849)
Q Consensus 334 ~l~~~~~~~~~~l~-------~L~~L~Ls~N~i~~~~p~~~~--~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~ 404 (849)
++....+..+.... +|+.|+|++|.++ .+|..+. .+++|+.|+|++|++++ +|..+..+++|+.|+|++
T Consensus 468 ~l~~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~ 545 (636)
T 4eco_A 468 MLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRN 545 (636)
T ss_dssp CCSBCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCS
T ss_pred CCCCcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCC
Confidence 66633322222221 5555555555555 4454444 55555555555555554 455555555555555543
Q ss_pred ccccccCccccccccccccccccc---CCCCChhhhcccccceeccCCcccccCCCccccccCCCcEEeccCCccccCCC
Q 042123 405 NQITGRLPKEIGSLTKLEYLDFSA---IGELPSQICNMKSLEKLNLSHNNLSGSIPSCFEGMHGLSFIDMSYNELQCPVP 481 (849)
Q Consensus 405 N~l~~~~p~~~~~l~~L~~L~l~~---l~~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~ 481 (849)
|+. ++. .+.+|..+.++++|+.|+|++|+| +.+|..+. ++|+.|++++|++.|...
T Consensus 546 N~~------------------ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~--~~L~~L~Ls~N~l~~~~~ 604 (636)
T 4eco_A 546 QRD------------------AQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKIT--PNISVLDIKDNPNISIDL 604 (636)
T ss_dssp CBC------------------TTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--TTCCEEECCSCTTCEEEC
T ss_pred Ccc------------------cccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhHh--CcCCEEECcCCCCccccH
Confidence 320 011 456777888888999999999999 57787766 899999999999987543
No 13
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=4.5e-50 Score=466.29 Aligned_cols=458 Identities=20% Similarity=0.230 Sum_probs=374.6
Q ss_pred CCCCCcEEEEecCCCceeeeeCCccCCCCCCCCEEeCcCCccccCCCccccCCCCCCEeeCCCCcCcccccccccccCCC
Q 042123 1 CNDAGRVINISLPNIGVNGTLHDFSFSSFPHLAYLDLTWNGFFGTIPPQISNLSNLRYLYLGSNQFSGNILAEVSSESSG 80 (849)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~ 80 (849)
|...|+ ++++.+++...... + .++|++|||++|+++++.|..|.++++|++|+|++|++++ ....+|
T Consensus 4 C~~~~~---c~~~~~~l~~ip~~--~--~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~------~~~~~~ 70 (549)
T 2z81_A 4 CDASGV---CDGRSRSFTSIPSG--L--TAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINT------IEGDAF 70 (549)
T ss_dssp ECTTSE---EECTTSCCSSCCSC--C--CTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCE------ECTTTT
T ss_pred CCCCce---EECCCCcccccccc--C--CCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCc------cChhhc
Confidence 555564 67788887644332 2 3789999999999999999999999999999999999984 234567
Q ss_pred CCccccCeEeccCCcccccCCccCCCCCCCCEEEccCCcccCC-CCCCCcCCCCCceeeccCcc-cccccccccCCCCCC
Q 042123 81 GNLRYMSRLVINDNSLSGFIPPHIGNLKFLSQLDLTNNKFSGP-IPLSFDNLSNLIFLYLYGNL-LSGSILSSLGKLKSL 158 (849)
Q Consensus 81 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~-~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L 158 (849)
+++++|++|+|++|.+++..|..|+++++|++|+|++|++++. .|..|.++++|++|++++|. +....+..|.++++|
T Consensus 71 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L 150 (549)
T 2z81_A 71 YSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSL 150 (549)
T ss_dssp TTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEE
T ss_pred cccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhccccc
Confidence 8999999999999999988888899999999999999999974 46789999999999999998 554555789999999
Q ss_pred CEEEcCCCcccccCCcCCCCCCCCCEEEccCCCCcCcCccc-ccCCCCCCEEeccCCcCccCC--C-cCccCccccchhh
Q 042123 159 FDLQLNDNQLIGYIPRPFSNLTSVSTLRLSRNDLFGSIPDE-IGKMRSLSVLDLNQNQFKGVL--P-PSISNLTNLKELA 234 (849)
Q Consensus 159 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~-~~~l~~L~~L~L~~N~l~~~~--~-~~~~~l~~L~~L~ 234 (849)
++|++++|++.+..|..|..+++|++|+++.|.+. .+|.. +..+++|++|++++|++++.. | .....+++|+.|+
T Consensus 151 ~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~ 229 (549)
T 2z81_A 151 NELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESA-FLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLA 229 (549)
T ss_dssp EEEEEEETTCCEECTTTTTTCSEEEEEEEECSBST-THHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEE
T ss_pred CeeeccCCcccccChhhhhccccCceEecccCccc-ccchhhHhhcccccEEEccCCccccccccccchhhhhhccccee
Confidence 99999999999999999999999999999999987 44444 467999999999999998642 2 2344577888888
Q ss_pred hccccccCCCCcchhh----h-hhhhhhccCcCCCCCCC-----------------------------------cccCCC
Q 042123 235 LLYNHLSGSIPPSLGN----L-ILRQLLLSGNHFTGYLP-----------------------------------YNICRG 274 (849)
Q Consensus 235 L~~N~l~~~~p~~~~~----~-~L~~L~L~~n~i~~~~~-----------------------------------~~~~~~ 274 (849)
+++|.+.+..+..+.. . .++.+++++|.+.+... ..+...
T Consensus 230 l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~ 309 (549)
T 2z81_A 230 FRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLL 309 (549)
T ss_dssp EESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHS
T ss_pred ccccccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhc
Confidence 8888876544433321 1 26666777766554211 011223
Q ss_pred CCcceeeecccccccccCCCC-CCcccccEEEccCccccCchhh---hhCCCCCCCEEeccCccccCccc--ccCCCCCC
Q 042123 275 GALEIFTVSENHFQGTIPTSL-RNCTSLIRVRLNGNNLTGNISE---ALGIYPNLTFIDLSRNNFYGEIS--SNWGKFPK 348 (849)
Q Consensus 275 ~~L~~L~l~~N~l~~~~~~~~-~~l~~L~~L~L~~n~l~~~~~~---~~~~l~~L~~L~Ls~N~l~~~~~--~~~~~l~~ 348 (849)
++|+.|++++|.+. .+|..+ .++++|+.|++++|++++..+. .++.+++|++|+|++|++++..+ ..+..+++
T Consensus 310 ~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~ 388 (549)
T 2z81_A 310 EKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKN 388 (549)
T ss_dssp TTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTT
T ss_pred ccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCC
Confidence 56888888888887 455554 5789999999999999976643 37788999999999999986543 45888999
Q ss_pred CcEEeccCCccccCCCCCccccccccccccccccccccCchhhcCCCCCcEEEccCccccccCccccccccccccccccc
Q 042123 349 LGTLNVSMNNITGGLPREIGNSSQLQAFDLSLNHIVGEIPKELGKLNPLTKLILRGNQITGRLPKEIGSLTKLEYLDFSA 428 (849)
Q Consensus 349 L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~ 428 (849)
|++|++++|+++ .+|..+..+++|++|++++|+++. +|..+ .++|+.|+|++|++++.. +.+++|++|++++
T Consensus 389 L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~-l~~~~--~~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~ 460 (549)
T 2z81_A 389 LTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRV-VKTCI--PQTLEVLDVSNNNLDSFS----LFLPRLQELYISR 460 (549)
T ss_dssp CCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSC-CCTTS--CTTCSEEECCSSCCSCCC----CCCTTCCEEECCS
T ss_pred CCEEECCCCCCc-cCChhhcccccccEEECCCCCccc-ccchh--cCCceEEECCCCChhhhc----ccCChhcEEECCC
Confidence 999999999999 688889999999999999999984 44433 268999999999998643 5789999999986
Q ss_pred --CCCCChhhhcccccceeccCCcccccCCCccccccCCCcEEeccCCccccCCCC
Q 042123 429 --IGELPSQICNMKSLEKLNLSHNNLSGSIPSCFEGMHGLSFIDMSYNELQCPVPN 482 (849)
Q Consensus 429 --l~~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~ 482 (849)
+..+|. ...+++|+.|+|++|+|++.+|..|..+++|+.|++++|+|.|+||.
T Consensus 461 N~l~~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 515 (549)
T 2z81_A 461 NKLKTLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 515 (549)
T ss_dssp SCCSSCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHHH
T ss_pred CccCcCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCcc
Confidence 778887 57899999999999999999999999999999999999999999984
No 14
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=3.8e-49 Score=470.32 Aligned_cols=445 Identities=20% Similarity=0.221 Sum_probs=291.6
Q ss_pred CCCCCcEEEEecCCCceeeeeCCccCCCCCCCCEEeC-cCCccccCCCccccCCC-CCCE--------------eeC-CC
Q 042123 1 CNDAGRVINISLPNIGVNGTLHDFSFSSFPHLAYLDL-TWNGFFGTIPPQISNLS-NLRY--------------LYL-GS 63 (849)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~L~~L~L-~~n~i~~~~~~~~~~l~-~L~~--------------L~L-~~ 63 (849)
|+.+|+|++|+|+.+++.|++++ +|..+++|++||| ++|.+.+..+....... .+.. +.. ..
T Consensus 319 C~~~~~V~~L~Ls~~~L~G~ip~-~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~ 397 (876)
T 4ecn_A 319 LDNNGRVTGLSLAGFGAKGRVPD-AIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQR 397 (876)
T ss_dssp ECTTSCEEEEECTTTCCEEEECG-GGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGG
T ss_pred ecCCCCEEEEECccCCCCCcCch-HHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcc
Confidence 66678899999999888888885 7888888999998 88887766442211110 0000 000 00
Q ss_pred CcCcccccccc-----cccCCCCCccccCeEeccC--CcccccCCccCCCCCCCCEEEccCCcccC--------------
Q 042123 64 NQFSGNILAEV-----SSESSGGNLRYMSRLVIND--NSLSGFIPPHIGNLKFLSQLDLTNNKFSG-------------- 122 (849)
Q Consensus 64 N~l~~~~~~~~-----~~~~~~~~l~~L~~L~l~~--n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~-------------- 122 (849)
..+++.....+ ...........++.+.+.. |.+++ +|..|+++++|++|+|++|+|++
T Consensus 398 ~~~s~l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~ 476 (876)
T 4ecn_A 398 LNLSDLLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDY 476 (876)
T ss_dssp GGSCHHHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHH
T ss_pred hhhhHHHHHHhhhCccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCccccccccccccc
Confidence 00000000000 0000112223344444443 77776 67778888888888888888876
Q ss_pred ---CCCCCCc--CCCCCceeeccCcccccccccccCCCCCCCEEEcCCCc-ccc-cCCcC-------CCCCCCCCEEEcc
Q 042123 123 ---PIPLSFD--NLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLNDNQ-LIG-YIPRP-------FSNLTSVSTLRLS 188 (849)
Q Consensus 123 ---~~~~~~~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~-l~~-~~~~~-------~~~l~~L~~L~Ls 188 (849)
.+|..+. ++++|++|+|++|.+.+.+|..|+++++|+.|+|++|+ +++ ..|.. +..+++|++|+|+
T Consensus 477 ~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls 556 (876)
T 4ecn_A 477 AKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMG 556 (876)
T ss_dssp HHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECC
T ss_pred ccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEee
Confidence 2666665 78888888888888777777778888888888888887 765 44443 3344588888888
Q ss_pred CCCCcCcCcc--cccCCCCCCEEeccCCcCccCCCcCccCccccchhhhccccccCCCCcchhhh-h-hhhhhccCcCCC
Q 042123 189 RNDLFGSIPD--EIGKMRSLSVLDLNQNQFKGVLPPSISNLTNLKELALLYNHLSGSIPPSLGNL-I-LRQLLLSGNHFT 264 (849)
Q Consensus 189 ~N~l~~~~~~--~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~-~-L~~L~L~~n~i~ 264 (849)
+|+++ .+|. .|.++++|++|+|++|+++ .+| .|..+++|++|+|++|.++ .+|..+..+ . |+.|+|++|+++
T Consensus 557 ~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~ 632 (876)
T 4ecn_A 557 YNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK 632 (876)
T ss_dssp SSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC
T ss_pred CCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC
Confidence 88887 6776 7888888888888888887 556 7788888888888888887 677666554 3 777777777777
Q ss_pred CCCCcccCCCCC--cceeeecccccccccCCCC---C--CcccccEEEccCccccCchhhhhCCCCCCCEEeccCccccC
Q 042123 265 GYLPYNICRGGA--LEIFTVSENHFQGTIPTSL---R--NCTSLIRVRLNGNNLTGNISEALGIYPNLTFIDLSRNNFYG 337 (849)
Q Consensus 265 ~~~~~~~~~~~~--L~~L~l~~N~l~~~~~~~~---~--~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 337 (849)
.+|..+..... |+.|++++|++.+.+|... . .+++|+.|+|++|+++..++..+..+++|+.|+|++|++..
T Consensus 633 -~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~~ 711 (876)
T 4ecn_A 633 -YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMTS 711 (876)
T ss_dssp -SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCSC
T ss_pred -cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCCc
Confidence 55666665543 8888888888877655332 2 33478888888888887666666788888888888888884
Q ss_pred cccccCCCC-------CCCcEEeccCCccccCCCCCcc--ccccccccccccccccccCchhhcCCCCCcEEEccC----
Q 042123 338 EISSNWGKF-------PKLGTLNVSMNNITGGLPREIG--NSSQLQAFDLSLNHIVGEIPKELGKLNPLTKLILRG---- 404 (849)
Q Consensus 338 ~~~~~~~~l-------~~L~~L~Ls~N~i~~~~p~~~~--~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~---- 404 (849)
..+..+... ++|+.|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|..+..+++|+.|+|++
T Consensus 712 ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~l 789 (876)
T 4ecn_A 712 IPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDA 789 (876)
T ss_dssp CCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCT
T ss_pred cChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCc
Confidence 333333322 27888888888887 6677766 77788888888888875 677777788888887766
Q ss_pred --ccccccCcccccccccccccccccCCCCChhhhcccccceeccCCcccccCCCccccccCCCcEEeccCCcccc
Q 042123 405 --NQITGRLPKEIGSLTKLEYLDFSAIGELPSQICNMKSLEKLNLSHNNLSGSIPSCFEGMHGLSFIDMSYNELQC 478 (849)
Q Consensus 405 --N~l~~~~p~~~~~l~~L~~L~l~~l~~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~ 478 (849)
|++.+.+|.. +.++++|+.|+|++|+| +.+|..+. ++|+.|||++|++..
T Consensus 790 s~N~l~~~ip~~---------------------l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~ 841 (876)
T 4ecn_A 790 EGNRILRQWPTG---------------------ITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNIS 841 (876)
T ss_dssp TCCBCCCCCCTT---------------------GGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCE
T ss_pred ccccccccChHH---------------------HhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCc
Confidence 4444444444 44445555555555555 34444433 355555555555543
No 15
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=2.6e-49 Score=456.44 Aligned_cols=451 Identities=21% Similarity=0.250 Sum_probs=385.7
Q ss_pred EEecCCCceeeeeCCccCCCCCCCCEEeCcCCccccCCCccccCCCCCCEeeCCCCcCcccccccccccCCCCCccccCe
Q 042123 9 NISLPNIGVNGTLHDFSFSSFPHLAYLDLTWNGFFGTIPPQISNLSNLRYLYLGSNQFSGNILAEVSSESSGGNLRYMSR 88 (849)
Q Consensus 9 ~~~~~~~~~~~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~ 88 (849)
.++++.+++.+. +. .+. ++|++|+|++|++.++.|..|.++++|++|+|++|++++. .+..|+++++|++
T Consensus 4 ~l~ls~n~l~~i-p~-~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~------~~~~~~~l~~L~~ 73 (520)
T 2z7x_B 4 LVDRSKNGLIHV-PK-DLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYL------DISVFKFNQELEY 73 (520)
T ss_dssp EEECTTSCCSSC-CC-SCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEE------EGGGGTTCTTCCE
T ss_pred eEecCCCCcccc-cc-ccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCc------ChHHhhcccCCCE
Confidence 578899998854 33 232 8999999999999999999999999999999999999853 3456788999999
Q ss_pred EeccCCcccccCCccCCCCCCCCEEEccCCcccCC-CCCCCcCCCCCceeeccCcccccccccccCCCCCC--CEEEcCC
Q 042123 89 LVINDNSLSGFIPPHIGNLKFLSQLDLTNNKFSGP-IPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSL--FDLQLND 165 (849)
Q Consensus 89 L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L--~~L~L~~ 165 (849)
|+|++|.|+. +|.. .+++|++|+|++|+++++ .|..|.++++|++|++++|.+++ ..|..+++| +.|+|++
T Consensus 74 L~Ls~N~l~~-lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~ 147 (520)
T 2z7x_B 74 LDLSHNKLVK-ISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVL 147 (520)
T ss_dssp EECCSSCCCE-EECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEE
T ss_pred EecCCCceee-cCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeec
Confidence 9999999995 4544 899999999999999974 68899999999999999999985 457777888 9999999
Q ss_pred Ccc--cccCCcCCCCCC-CCCEEEccCCCCcCcCcc-cccCCCCCCEEeccCCc-------CccCCCcCccCccccchhh
Q 042123 166 NQL--IGYIPRPFSNLT-SVSTLRLSRNDLFGSIPD-EIGKMRSLSVLDLNQNQ-------FKGVLPPSISNLTNLKELA 234 (849)
Q Consensus 166 N~l--~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~L~~N~-------l~~~~~~~~~~l~~L~~L~ 234 (849)
|.+ .+..|..|..+. +...+++++|++.+.+++ .+.++++|+.|++++|. +.+.+| .+..+++|+.|+
T Consensus 148 n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~ 226 (520)
T 2z7x_B 148 GETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLT 226 (520)
T ss_dssp CTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEE
T ss_pred ccccccccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhcc
Confidence 999 778888888776 355678899998765554 67889999999999998 665555 789999999999
Q ss_pred hccccccCCCCcchh----hhhhhhhhccCcCCCCCCCccc-----CCCCCcceeeecccccccccC-CCCCCc---ccc
Q 042123 235 LLYNHLSGSIPPSLG----NLILRQLLLSGNHFTGYLPYNI-----CRGGALEIFTVSENHFQGTIP-TSLRNC---TSL 301 (849)
Q Consensus 235 L~~N~l~~~~p~~~~----~~~L~~L~L~~n~i~~~~~~~~-----~~~~~L~~L~l~~N~l~~~~~-~~~~~l---~~L 301 (849)
+++|.+++..+..+. ...|++|++++|++++.+|..+ ..+++|+.++++.|.+ .+| ..+..+ .+|
T Consensus 227 l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L 304 (520)
T 2z7x_B 227 LNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNI 304 (520)
T ss_dssp EEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCC
T ss_pred ccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCce
Confidence 999998754333222 2259999999999999999988 8999999999999999 444 444444 679
Q ss_pred cEEEccCccccCchhhhhCCCCCCCEEeccCccccCcccccCCCCCCCcEEeccCCcccc--CCCCCccccccccccccc
Q 042123 302 IRVRLNGNNLTGNISEALGIYPNLTFIDLSRNNFYGEISSNWGKFPKLGTLNVSMNNITG--GLPREIGNSSQLQAFDLS 379 (849)
Q Consensus 302 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~--~~p~~~~~l~~L~~L~L~ 379 (849)
+.|++++|.+.... .+..+++|++|++++|++.+..|..+..+++|++|++++|++++ .+|..+..+++|+.|+++
T Consensus 305 ~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls 382 (520)
T 2z7x_B 305 KNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDIS 382 (520)
T ss_dssp SEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECC
T ss_pred eEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECC
Confidence 99999999987543 23688999999999999999899999999999999999999996 456778999999999999
Q ss_pred cccccccCch-hhcCCCCCcEEEccCccccccCccccccccccccccccc--CCCCChhhhcccccceeccCCcccccCC
Q 042123 380 LNHIVGEIPK-ELGKLNPLTKLILRGNQITGRLPKEIGSLTKLEYLDFSA--IGELPSQICNMKSLEKLNLSHNNLSGSI 456 (849)
Q Consensus 380 ~N~i~~~~~~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~--l~~lp~~~~~l~~L~~L~L~~N~l~~~~ 456 (849)
+|.+++.+|. .+..+++|++|++++|++++..|..+. ++|++|+++. +..+|..+..+++|+.|+|++|+|++..
T Consensus 383 ~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~L~~N~l~~l~ 460 (520)
T 2z7x_B 383 QNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIKSIPKQVVKLEALQELNVASNQLKSVP 460 (520)
T ss_dssp SSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCCCCC
T ss_pred CCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCcccccchhhhcCCCCCEEECCCCcCCccC
Confidence 9999985665 588999999999999999988887775 7899999986 7899999999999999999999999655
Q ss_pred CccccccCCCcEEeccCCccccCCCC
Q 042123 457 PSCFEGMHGLSFIDMSYNELQCPVPN 482 (849)
Q Consensus 457 p~~~~~l~~L~~l~l~~N~l~~~~~~ 482 (849)
+..|..+++|+.|++++|+|+|+|+.
T Consensus 461 ~~~~~~l~~L~~L~l~~N~~~c~c~~ 486 (520)
T 2z7x_B 461 DGIFDRLTSLQKIWLHTNPWDCSCPR 486 (520)
T ss_dssp TTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred HHHhccCCcccEEECcCCCCcccCCc
Confidence 55599999999999999999999874
No 16
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.1e-47 Score=448.43 Aligned_cols=438 Identities=23% Similarity=0.241 Sum_probs=392.0
Q ss_pred cEEEEecCCCceeeeeCCccCCCCCCCCEEeCcCCccccCCCccccCCCCCCEeeCCCCcCcccccccccccCCCCCccc
Q 042123 6 RVINISLPNIGVNGTLHDFSFSSFPHLAYLDLTWNGFFGTIPPQISNLSNLRYLYLGSNQFSGNILAEVSSESSGGNLRY 85 (849)
Q Consensus 6 ~~~~~~~~~~~~~~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~ 85 (849)
.++.++++.+.+.+... .+|.++++|++|||++|++.++.+.+|+++++|++|+|++|++++ ..+..|+++++
T Consensus 29 ~l~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~------~~~~~~~~l~~ 101 (570)
T 2z63_A 29 STKNLDLSFNPLRHLGS-YSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQS------LALGAFSGLSS 101 (570)
T ss_dssp SCCEEECCSCCCCEECT-TTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCE------ECTTTTTTCTT
T ss_pred cccEEEccCCccCccCh-hHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCc------cCHhhhcCccc
Confidence 57889999999877644 489999999999999999999999999999999999999999974 23467889999
Q ss_pred cCeEeccCCcccccCCccCCCCCCCCEEEccCCcccCC-CCCCCcCCCCCceeeccCcccccccccccCCCCCC----CE
Q 042123 86 MSRLVINDNSLSGFIPPHIGNLKFLSQLDLTNNKFSGP-IPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSL----FD 160 (849)
Q Consensus 86 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L----~~ 160 (849)
|++|++++|.+++..+..|+++++|++|++++|+++++ .|..|.++++|++|++++|++++..+..|+.+++| +.
T Consensus 102 L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~ 181 (570)
T 2z63_A 102 LQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLS 181 (570)
T ss_dssp CCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCE
T ss_pred cccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhh
Confidence 99999999999987777899999999999999999974 58999999999999999999998888889888888 89
Q ss_pred EEcCCCcccccCCcCCCCCCCCCEEEccCC--------------------------------------------------
Q 042123 161 LQLNDNQLIGYIPRPFSNLTSVSTLRLSRN-------------------------------------------------- 190 (849)
Q Consensus 161 L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N-------------------------------------------------- 190 (849)
|++++|.+.++.+..|..+ +|++|++++|
T Consensus 182 L~l~~n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~ 260 (570)
T 2z63_A 182 LDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIE 260 (570)
T ss_dssp EECTTCCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEE
T ss_pred cccCCCCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchh
Confidence 9999999999999988876 7999999887
Q ss_pred --------CCcCcCcccccCCCCCCEEeccCCcCccCCCcCccCccccchhhhccccccCCCCcchhhhhhhhhhccCcC
Q 042123 191 --------DLFGSIPDEIGKMRSLSVLDLNQNQFKGVLPPSISNLTNLKELALLYNHLSGSIPPSLGNLILRQLLLSGNH 262 (849)
Q Consensus 191 --------~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~L~~n~ 262 (849)
.+.+..|+.+..+++|++|++++|.++ .+|..+..+ +|++|++++|.+. .+|.. ....|+.|++++|.
T Consensus 261 ~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~-~l~~~-~l~~L~~L~l~~n~ 336 (570)
T 2z63_A 261 EFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFG-QFPTL-KLKSLKRLTFTSNK 336 (570)
T ss_dssp EEEEEETTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCS-SCCBC-BCSSCCEEEEESCB
T ss_pred hhhhhcchhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCccc-ccCcc-cccccCEEeCcCCc
Confidence 333455677888999999999999998 578888888 9999999999998 66662 33359999999999
Q ss_pred CCCCCCcccCCCCCcceeeeccccccccc--CCCCCCcccccEEEccCccccCchhhhhCCCCCCCEEeccCccccCccc
Q 042123 263 FTGYLPYNICRGGALEIFTVSENHFQGTI--PTSLRNCTSLIRVRLNGNNLTGNISEALGIYPNLTFIDLSRNNFYGEIS 340 (849)
Q Consensus 263 i~~~~~~~~~~~~~L~~L~l~~N~l~~~~--~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 340 (849)
+.+..+. ..+++|+.|++++|++++.. |..+.++++|+.|++++|.+++.++. +..+++|+.|++++|.+.+..+
T Consensus 337 ~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~ 413 (570)
T 2z63_A 337 GGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSE 413 (570)
T ss_dssp SCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTT
T ss_pred ccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccc
Confidence 9877765 77899999999999998654 67788999999999999999977666 9999999999999999997766
Q ss_pred -ccCCCCCCCcEEeccCCccccCCCCCcccccccccccccccccc-ccCchhhcCCCCCcEEEccCccccccCccccccc
Q 042123 341 -SNWGKFPKLGTLNVSMNNITGGLPREIGNSSQLQAFDLSLNHIV-GEIPKELGKLNPLTKLILRGNQITGRLPKEIGSL 418 (849)
Q Consensus 341 -~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~N~i~-~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 418 (849)
..+..+++|++|++++|.+++..|..+.++++|+.|++++|.++ +.+|..|..+++|++|+|++|++++..|..|..+
T Consensus 414 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 493 (570)
T 2z63_A 414 FSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSL 493 (570)
T ss_dssp SCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTC
T ss_pred hhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcc
Confidence 57899999999999999999999999999999999999999997 5789999999999999999999999889999999
Q ss_pred cccccccccc--CCCCC-hhhhcccccceeccCCcccccCCCc
Q 042123 419 TKLEYLDFSA--IGELP-SQICNMKSLEKLNLSHNNLSGSIPS 458 (849)
Q Consensus 419 ~~L~~L~l~~--l~~lp-~~~~~l~~L~~L~L~~N~l~~~~p~ 458 (849)
++|++|++++ +..+| ..+.++++|+.|++++|++++..|.
T Consensus 494 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 536 (570)
T 2z63_A 494 SSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 536 (570)
T ss_dssp TTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred cCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcc
Confidence 9999999986 56665 4689999999999999999987774
No 17
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=7.2e-47 Score=450.73 Aligned_cols=440 Identities=17% Similarity=0.224 Sum_probs=341.6
Q ss_pred CCCCEEeCcCCccccCCCccccCCCCCCEeeC-CCCcCcccccccccccCCCCCccc-----c-----------------
Q 042123 30 PHLAYLDLTWNGFFGTIPPQISNLSNLRYLYL-GSNQFSGNILAEVSSESSGGNLRY-----M----------------- 86 (849)
Q Consensus 30 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L-~~N~l~~~~~~~~~~~~~~~~l~~-----L----------------- 86 (849)
.+++.|+|++|++.+.+|++|++|++|++|+| ++|.++|..+..... ....+.. +
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~--~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~ 400 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEE--LTPDMSEERKHRIRMHYKKMFLDYDQRLNL 400 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBC--CCSSCCHHHHHHHHTHHHHHHTCCCGGGGS
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccc--cccccchhHHHHHHHhhhhhhhccCcchhh
Confidence 57999999999999999999999999999999 999988753322100 0000000 0
Q ss_pred ---CeEeccCCcccccCCccCCCCCCCCEEEccC--CcccCCCCCCCcCCCCCceeeccCccccc---------------
Q 042123 87 ---SRLVINDNSLSGFIPPHIGNLKFLSQLDLTN--NKFSGPIPLSFDNLSNLIFLYLYGNLLSG--------------- 146 (849)
Q Consensus 87 ---~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~--n~i~~~~~~~~~~l~~L~~L~L~~N~l~~--------------- 146 (849)
..-.+..+.. ..+-.......++.+.+.. |++++ +|..|.++++|++|+|++|++++
T Consensus 401 s~l~~~~l~~~~~--~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~ 477 (876)
T 4ecn_A 401 SDLLQDAINRNPE--MKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYA 477 (876)
T ss_dssp CHHHHHHHHTCTT--SCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHH
T ss_pred hHHHHHHhhhCcc--ccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccc
Confidence 0000000100 0111112334455555554 89997 78899999999999999999998
Q ss_pred --ccccccC--CCCCCCEEEcCCCcccccCCcCCCCCCCCCEEEccCCC-CcC-cCcccccCCC-------CCCEEeccC
Q 042123 147 --SILSSLG--KLKSLFDLQLNDNQLIGYIPRPFSNLTSVSTLRLSRND-LFG-SIPDEIGKMR-------SLSVLDLNQ 213 (849)
Q Consensus 147 --~~~~~~~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~-~~~~~~~~l~-------~L~~L~L~~ 213 (849)
.+|..++ ++++|+.|+|++|.+.+..|..|.++++|++|+|++|+ +++ .+|..+..++ +|++|+|++
T Consensus 478 ~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~ 557 (876)
T 4ecn_A 478 KQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGY 557 (876)
T ss_dssp HHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCS
T ss_pred cccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeC
Confidence 3788877 99999999999999999999999999999999999998 887 7887666655 999999999
Q ss_pred CcCccCCCc--CccCccccchhhhccccccCCCCcchhhh-hhhhhhccCcCCCCCCCcccCCCCC-cceeeeccccccc
Q 042123 214 NQFKGVLPP--SISNLTNLKELALLYNHLSGSIPPSLGNL-ILRQLLLSGNHFTGYLPYNICRGGA-LEIFTVSENHFQG 289 (849)
Q Consensus 214 N~l~~~~~~--~~~~l~~L~~L~L~~N~l~~~~p~~~~~~-~L~~L~L~~n~i~~~~~~~~~~~~~-L~~L~l~~N~l~~ 289 (849)
|+++ .+|. .|.++++|++|+|++|.++ .+| .++.+ .|+.|+|++|+++ .+|..+..+++ |+.|++++|+++
T Consensus 558 N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~- 632 (876)
T 4ecn_A 558 NNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK- 632 (876)
T ss_dssp SCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-
T ss_pred CcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-
Confidence 9999 7788 8999999999999999998 888 56555 4999999999998 77888888888 999999999988
Q ss_pred ccCCCCCCccc--ccEEEccCccccCchhhhh---C--CCCCCCEEeccCccccCcccccCCCCCCCcEEeccCCccccC
Q 042123 290 TIPTSLRNCTS--LIRVRLNGNNLTGNISEAL---G--IYPNLTFIDLSRNNFYGEISSNWGKFPKLGTLNVSMNNITGG 362 (849)
Q Consensus 290 ~~~~~~~~l~~--L~~L~L~~n~l~~~~~~~~---~--~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~ 362 (849)
.+|..+..++. |+.|++++|++++.+|... . ..++|+.|+|++|++...++..+..+++|+.|+|++|.++ .
T Consensus 633 ~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~-~ 711 (876)
T 4ecn_A 633 YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMT-S 711 (876)
T ss_dssp SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCS-C
T ss_pred cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCC-c
Confidence 67888777654 9999999999987655322 2 3458899999999998554444557889999999999998 5
Q ss_pred CCCCccc--------cccccccccccccccccCchhhc--CCCCCcEEEccCccccccCcccccccccccccccccCCCC
Q 042123 363 LPREIGN--------SSQLQAFDLSLNHIVGEIPKELG--KLNPLTKLILRGNQITGRLPKEIGSLTKLEYLDFSAIGEL 432 (849)
Q Consensus 363 ~p~~~~~--------l~~L~~L~L~~N~i~~~~~~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~l~~l 432 (849)
+|..+.. +++|+.|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|..++.+++|+.|+++...
T Consensus 712 ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~-- 787 (876)
T 4ecn_A 712 IPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQR-- 787 (876)
T ss_dssp CCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCB--
T ss_pred cChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCC--
Confidence 5554433 338899999999988 6777776 88899999999998885 67777777777777766422
Q ss_pred ChhhhcccccceeccCCcccccCCCccccccCCCcEEeccCCccccCCCCCcccccCcccccccCCC
Q 042123 433 PSQICNMKSLEKLNLSHNNLSGSIPSCFEGMHGLSFIDMSYNELQCPVPNSTTFRGASVEALKGNKG 499 (849)
Q Consensus 433 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~ 499 (849)
++++|++.+.+|..|..+++|+.|+|++|++ +.+|... ++......+.+|+.
T Consensus 788 -------------~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l-~~~L~~LdLs~N~l 839 (876)
T 4ecn_A 788 -------------DAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKL-TPQLYILDIADNPN 839 (876)
T ss_dssp -------------CTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCC-CSSSCEEECCSCTT
T ss_pred -------------CcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhh-cCCCCEEECCCCCC
Confidence 5677999999999999999999999999999 7777652 23344444556653
No 18
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=2.4e-47 Score=402.64 Aligned_cols=244 Identities=20% Similarity=0.363 Sum_probs=193.7
Q ss_pred cCCCcCceecCCccceEEEEEec------CCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCC
Q 042123 588 NDFDAKYCIGNGGHASVYRAELP------SGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHAR 650 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~ 650 (849)
.+++..+.||+|+||+||+|++. +++.||||+++.... ....++|.+|+. +++|+|.+++
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~---~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~ 102 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAE---GPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQ 102 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CC---C-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccC---hHHHHHHHHHHHHHHhCCCCCCCCcceEEEECC
Confidence 35566789999999999999762 467899999875422 223456777755 4789999999
Q ss_pred eeEEEEEeccCCChhhhhcccc-------------cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeec
Q 042123 651 HSFLLYEFLERGSLAAILNTDA-------------AAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLD 717 (849)
Q Consensus 651 ~~~lV~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~ 717 (849)
..++|||||++|+|.+++.... ....++|.++.+|+.|||.||+|||+. +|+||||||+|||++
T Consensus 103 ~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~ 179 (308)
T 4gt4_A 103 PLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVY 179 (308)
T ss_dssp SCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEC
T ss_pred EEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEEC
Confidence 9999999999999999996432 124589999999999999999999999 999999999999999
Q ss_pred CCCcEEEeeecCCcccCCCC--CCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCcccccccccc
Q 042123 718 LEYEAHVADFGIAKSLKPDS--SNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIK-GKHPRDFLSSISSSSL 794 (849)
Q Consensus 718 ~~~~~kl~DfG~a~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~t-g~~Pf~~~~~~~~~~~ 794 (849)
+++.+||+|||+|+.....+ .......||+.|||||++.++.|+.++|||||||++|||+| |+.||.....
T Consensus 180 ~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~------ 253 (308)
T 4gt4_A 180 DKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN------ 253 (308)
T ss_dssp GGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH------
T ss_pred CCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH------
Confidence 99999999999998764332 22345678999999999999999999999999999999998 8999975432
Q ss_pred ccccccccccCCCCCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 795 NTDVALDQMLDPRLPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
......+..+..++.+.. .+..+.+++.+||+.||++||||+||+++|+
T Consensus 254 --~~~~~~i~~~~~~~~p~~---~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~ 302 (308)
T 4gt4_A 254 --QDVVEMIRNRQVLPCPDD---CPAWVYALMIECWNEFPSRRPRFKDIHSRLR 302 (308)
T ss_dssp --HHHHHHHHTTCCCCCCTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred --HHHHHHHHcCCCCCCccc---chHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 122222333332222222 2234788999999999999999999999986
No 19
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1.3e-46 Score=394.84 Aligned_cols=246 Identities=22% Similarity=0.372 Sum_probs=186.5
Q ss_pred hcCCCcCceecCCccceEEEEEecCCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeEEE
Q 042123 587 TNDFDAKYCIGNGGHASVYRAELPSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSFLL 655 (849)
Q Consensus 587 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~lV 655 (849)
.++|...+.||+|+||+||+|++. ..||||+++... ......+.|.+|+. +++|++.+ +..++|
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~--~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iV 109 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVD--PTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIV 109 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSS--CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecC--CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEE
Confidence 467788899999999999999875 359999986432 22334567888866 36787755 568999
Q ss_pred EEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccCC
Q 042123 656 YEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLKP 735 (849)
Q Consensus 656 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~~ 735 (849)
||||++|+|.++++... ..++|.++..|+.|||.||+|||++ +|+||||||+|||+++++.+||+|||+|+....
T Consensus 110 mEy~~gGsL~~~l~~~~--~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~ 184 (307)
T 3omv_A 110 TQWCEGSSLYKHLHVQE--TKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSR 184 (307)
T ss_dssp EECCSSCBHHHHHHTSC--CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC---
T ss_pred EEcCCCCCHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceeccc
Confidence 99999999999997543 3599999999999999999999998 999999999999999999999999999987643
Q ss_pred CC--CCeeeccCCccccccccccC---CCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCC
Q 042123 736 DS--SNWTEFAGTCGYIAPELAYT---MKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPA 810 (849)
Q Consensus 736 ~~--~~~~~~~g~~~y~aPE~~~~---~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (849)
.. .......||+.|||||++.+ +.|+.++|||||||++|||+||+.||........ ...........+..+.
T Consensus 185 ~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~---~~~~~~~~~~~p~~~~ 261 (307)
T 3omv_A 185 WSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQ---IIFMVGRGYASPDLSK 261 (307)
T ss_dssp ---------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH---HHHHHHTTCCCCCSTT
T ss_pred CCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHH---HHHHHhcCCCCCCccc
Confidence 22 23455689999999999864 4589999999999999999999999975432110 0001111112222221
Q ss_pred CChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 811 PSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 811 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
.. ......+.+++.+||+.||++||||.||+++|+
T Consensus 262 ~~---~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le 296 (307)
T 3omv_A 262 LY---KNCPKAMKRLVADCVKKVKEERPLFPQILSSIE 296 (307)
T ss_dssp SC---TTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHH
T ss_pred cc---ccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence 11 122345788999999999999999999998875
No 20
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=7.7e-47 Score=439.46 Aligned_cols=453 Identities=19% Similarity=0.208 Sum_probs=330.3
Q ss_pred EEEecCCCceeeeeCCccCCCCCCCCEEeCcCCccccCCCccccCCCCCCEeeCCCCcCcccccccccccCCCCCccccC
Q 042123 8 INISLPNIGVNGTLHDFSFSSFPHLAYLDLTWNGFFGTIPPQISNLSNLRYLYLGSNQFSGNILAEVSSESSGGNLRYMS 87 (849)
Q Consensus 8 ~~~~~~~~~~~~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~ 87 (849)
..++++.+++.+.... + .++|++|+|++|+|.++.+.+|.++++|++|+|++|++++ ..+.+|+++++|+
T Consensus 34 ~~l~ls~~~L~~ip~~--~--~~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~------~~~~~~~~l~~L~ 103 (562)
T 3a79_B 34 SMVDYSNRNLTHVPKD--L--PPRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRS------LDFHVFLFNQDLE 103 (562)
T ss_dssp CEEECTTSCCCSCCTT--S--CTTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCE------ECTTTTTTCTTCC
T ss_pred cEEEcCCCCCccCCCC--C--CCCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCc------CCHHHhCCCCCCC
Confidence 5566677776653222 2 2667777777777777776777777777777777777763 2334566677777
Q ss_pred eEeccCCcccccCCccCCCCCCCCEEEccCCcccCCC-CCCCcCCCCCceeeccCcccccccccccCCCCCC--CEEEcC
Q 042123 88 RLVINDNSLSGFIPPHIGNLKFLSQLDLTNNKFSGPI-PLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSL--FDLQLN 164 (849)
Q Consensus 88 ~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~-~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L--~~L~L~ 164 (849)
+|+|++|.|+. +|.. .+++|++|+|++|+++++. |..|.++++|++|+|++|+++.. .+.++++| ++|+|+
T Consensus 104 ~L~Ls~N~l~~-lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~ 177 (562)
T 3a79_B 104 YLDVSHNRLQN-ISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLD 177 (562)
T ss_dssp EEECTTSCCCE-ECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEE
T ss_pred EEECCCCcCCc-cCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEee
Confidence 77777777774 3433 6777777777777777533 46677777777777777777642 34444444 777777
Q ss_pred CCcc--cccCCcCCCCCC--CCCEEEccCCCCcCcCcc-cccCCCCCCEEeccCCcCc----cCCCcCccCccccchhhh
Q 042123 165 DNQL--IGYIPRPFSNLT--SVSTLRLSRNDLFGSIPD-EIGKMRSLSVLDLNQNQFK----GVLPPSISNLTNLKELAL 235 (849)
Q Consensus 165 ~N~l--~~~~~~~~~~l~--~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~L~~N~l~----~~~~~~~~~l~~L~~L~L 235 (849)
+|++ .+..|..|..+. .| .++++.|.+.+.+++ .+..+++|+.|++++|+.. ......+..+++|+.|++
T Consensus 178 ~n~l~~~~~~~~~l~~l~~~~l-~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L 256 (562)
T 3a79_B 178 LVSYHIKGGETESLQIPNTTVL-HLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTL 256 (562)
T ss_dssp ESSCCCCSSSCCEEEECCEEEE-EEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEE
T ss_pred cccccccccCcccccccCcceE-EEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEe
Confidence 7777 666666666554 22 456667766654443 4556777788888777521 011234666777777777
Q ss_pred ccccccCCC----CcchhhhhhhhhhccCcCCCCCCCccc-----CCCCCcceeeecccccccccC-CCCCCc---cccc
Q 042123 236 LYNHLSGSI----PPSLGNLILRQLLLSGNHFTGYLPYNI-----CRGGALEIFTVSENHFQGTIP-TSLRNC---TSLI 302 (849)
Q Consensus 236 ~~N~l~~~~----p~~~~~~~L~~L~L~~n~i~~~~~~~~-----~~~~~L~~L~l~~N~l~~~~~-~~~~~l---~~L~ 302 (849)
+++.+.+.. +.......|++|++++|.+++.+|..+ ..++.|+.++++.|.+ .+| ..+..+ .+|+
T Consensus 257 ~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~--~~p~~~~~~~~~~~~L~ 334 (562)
T 3a79_B 257 QHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF--LFSKEALYSVFAEMNIK 334 (562)
T ss_dssp EEEEECHHHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC--SSCHHHHHHHHHTCCCS
T ss_pred cCCcCcHHHHHHHHHhhhcccccEEEEeccEeeccccchhhhcccccchheehhhccccee--ecChhhhhhhhccCcce
Confidence 777665321 122222358899999999998888877 6677777777777776 233 222222 5699
Q ss_pred EEEccCccccCchhhhhCCCCCCCEEeccCccccCcccccCCCCCCCcEEeccCCccccC--CCCCcccccccccccccc
Q 042123 303 RVRLNGNNLTGNISEALGIYPNLTFIDLSRNNFYGEISSNWGKFPKLGTLNVSMNNITGG--LPREIGNSSQLQAFDLSL 380 (849)
Q Consensus 303 ~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~--~p~~~~~l~~L~~L~L~~ 380 (849)
.|++++|.+.... ....+++|++|++++|++.+..|..+..+++|++|++++|++++. .|..+.++++|+.|++++
T Consensus 335 ~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~ 412 (562)
T 3a79_B 335 MLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSL 412 (562)
T ss_dssp EEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTT
T ss_pred EEEccCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCC
Confidence 9999999987432 126889999999999999998999999999999999999999963 346789999999999999
Q ss_pred ccccccCc-hhhcCCCCCcEEEccCccccccCccccccccccccccccc--CCCCChhhhcccccceeccCCcccccCCC
Q 042123 381 NHIVGEIP-KELGKLNPLTKLILRGNQITGRLPKEIGSLTKLEYLDFSA--IGELPSQICNMKSLEKLNLSHNNLSGSIP 457 (849)
Q Consensus 381 N~i~~~~~-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~--l~~lp~~~~~l~~L~~L~L~~N~l~~~~p 457 (849)
|++++.+| ..+..+++|++|+|++|++++..|..+. ++|++|+++. +..+|..+..+++|+.|+|++|+|++..+
T Consensus 413 N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~l~~ 490 (562)
T 3a79_B 413 NSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIMSIPKDVTHLQALQELNVASNQLKSVPD 490 (562)
T ss_dssp SCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCCCCCTTTTSSCCCSEEECCSSCCCCCCT
T ss_pred CcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCcccChhhcCCCCCCEEECCCCCCCCCCH
Confidence 99998455 4688999999999999999988777665 7899999986 78999999999999999999999996555
Q ss_pred ccccccCCCcEEeccCCccccCCCCC
Q 042123 458 SCFEGMHGLSFIDMSYNELQCPVPNS 483 (849)
Q Consensus 458 ~~~~~l~~L~~l~l~~N~l~~~~~~~ 483 (849)
..|..+++|+.|++++|+|+|+|+..
T Consensus 491 ~~~~~l~~L~~L~l~~N~~~c~c~~~ 516 (562)
T 3a79_B 491 GVFDRLTSLQYIWLHDNPWDCTCPGI 516 (562)
T ss_dssp TSTTTCTTCCCEECCSCCBCCCHHHH
T ss_pred HHHhcCCCCCEEEecCCCcCCCcchH
Confidence 55999999999999999999999753
No 21
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=7.3e-46 Score=439.06 Aligned_cols=460 Identities=19% Similarity=0.181 Sum_probs=350.7
Q ss_pred EecCCCceeeeeCCccCCCCCCCCEEeCcCCccccCCCccccCCCCCCEeeCCCCcCcccccccccccCCCCCccccCeE
Q 042123 10 ISLPNIGVNGTLHDFSFSSFPHLAYLDLTWNGFFGTIPPQISNLSNLRYLYLGSNQFSGNILAEVSSESSGGNLRYMSRL 89 (849)
Q Consensus 10 ~~~~~~~~~~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L 89 (849)
++|...++.......+ +++++|||++|+|+++.+.+|.++++|++|+|++|+|++ .++.+|.++++|++|
T Consensus 36 ~~c~~~~l~~vP~~lp----~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~------i~~~~f~~L~~L~~L 105 (635)
T 4g8a_A 36 YQCMELNFYKIPDNLP----FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQT------IEDGAYQSLSHLSTL 105 (635)
T ss_dssp EECTTSCCSSCCSSSC----TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCE------ECTTTTTTCTTCCEE
T ss_pred EECCCCCcCccCCCCC----cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCC------cChhHhcCCCCCCEE
Confidence 5788888765543321 479999999999999999999999999999999999973 456678999999999
Q ss_pred eccCCcccccCCccCCCCCCCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccc-cccccCCCCCCCEEEcCCCcc
Q 042123 90 VINDNSLSGFIPPHIGNLKFLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGS-ILSSLGKLKSLFDLQLNDNQL 168 (849)
Q Consensus 90 ~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~L~~N~l 168 (849)
+|++|+|++..+.+|.++++|++|+|++|+|+++.+..|.++++|++|+|++|.++.. .|..++.+++|++|+|++|++
T Consensus 106 ~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l 185 (635)
T 4g8a_A 106 ILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI 185 (635)
T ss_dssp ECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCC
T ss_pred EccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccc
Confidence 9999999988888999999999999999999998888999999999999999999754 577889999999999999999
Q ss_pred cccCCcCCCCCCCCC----EEEccCCCCcCcCcccccCCCCCCEEeccCCcCcc--------------------------
Q 042123 169 IGYIPRPFSNLTSVS----TLRLSRNDLFGSIPDEIGKMRSLSVLDLNQNQFKG-------------------------- 218 (849)
Q Consensus 169 ~~~~~~~~~~l~~L~----~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~-------------------------- 218 (849)
.++.+..|..+.+++ .++++.|.+....+..+ ....++.|++.+|....
T Consensus 186 ~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~-~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~ 264 (635)
T 4g8a_A 186 QSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAF-KEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNE 264 (635)
T ss_dssp CEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTT-TTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTS
T ss_pred cccccccccchhhhhhhhhhhhcccCcccccCcccc-cchhhhhhhhhcccccccccchhhcCCcccccccccccccccc
Confidence 999888887665544 68888888875444333 23344455555443210
Q ss_pred -----CC---------------------------CcCccCccccchhhhccccccCCCCcchhhhhhhhhhccCcCCCCC
Q 042123 219 -----VL---------------------------PPSISNLTNLKELALLYNHLSGSIPPSLGNLILRQLLLSGNHFTGY 266 (849)
Q Consensus 219 -----~~---------------------------~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~L~~n~i~~~ 266 (849)
.. +..+..+.+++.+.+.+|.+.. ++.......++.|++++|.+...
T Consensus 265 ~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~-~~~~~~~~~L~~L~l~~~~~~~~ 343 (635)
T 4g8a_A 265 GNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIER-VKDFSYNFGWQHLELVNCKFGQF 343 (635)
T ss_dssp CCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEE-CGGGGSCCCCSEEEEESCEESSC
T ss_pred cccccccccccccccchhhhhhhhhhhcccccchhhhhhhhccccccccccccccc-ccccccchhhhhhhcccccccCc
Confidence 00 0111122222233333332221 11111111244444444444332
Q ss_pred CCc-------------------ccCCCCCcceeeeccccccc--ccCCCCCCcccccEEEccCccccCchhhhhCCCCCC
Q 042123 267 LPY-------------------NICRGGALEIFTVSENHFQG--TIPTSLRNCTSLIRVRLNGNNLTGNISEALGIYPNL 325 (849)
Q Consensus 267 ~~~-------------------~~~~~~~L~~L~l~~N~l~~--~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 325 (849)
.+. ....+++|+.++++.|.+.. ..+..+..+.+|+.|++..|.+.. .+..+..+++|
T Consensus 344 ~~~~l~~L~~l~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~-~~~~~~~l~~L 422 (635)
T 4g8a_A 344 PTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVIT-MSSNFLGLEQL 422 (635)
T ss_dssp CCCBCTTCCEEEEESCCSCCBCCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEE-ECSCCTTCTTC
T ss_pred CcccchhhhhcccccccCCCCcccccccccccchhhccccccccccccchhhhhhhhhhhcccccccc-ccccccccccc
Confidence 221 22345667777777776643 233344556677777777777663 34567778899
Q ss_pred CEEeccCccccCcc-cccCCCCCCCcEEeccCCccccCCCCCcccccccccccccccccc-ccCchhhcCCCCCcEEEcc
Q 042123 326 TFIDLSRNNFYGEI-SSNWGKFPKLGTLNVSMNNITGGLPREIGNSSQLQAFDLSLNHIV-GEIPKELGKLNPLTKLILR 403 (849)
Q Consensus 326 ~~L~Ls~N~l~~~~-~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~N~i~-~~~~~~~~~l~~L~~L~L~ 403 (849)
+.+++++|...... +..|..+++++.++++.|.+.+..+..+..++.|+.|+|++|.+. +..|..|..+++|++|+|+
T Consensus 423 ~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls 502 (635)
T 4g8a_A 423 EHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLS 502 (635)
T ss_dssp CEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECT
T ss_pred cchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECC
Confidence 99999888776544 456788999999999999999999999999999999999999854 4678899999999999999
Q ss_pred CccccccCccccccccccccccccc--CCCCC-hhhhcccccceeccCCcccccCCCcccccc-CCCcEEeccCCccccC
Q 042123 404 GNQITGRLPKEIGSLTKLEYLDFSA--IGELP-SQICNMKSLEKLNLSHNNLSGSIPSCFEGM-HGLSFIDMSYNELQCP 479 (849)
Q Consensus 404 ~N~l~~~~p~~~~~l~~L~~L~l~~--l~~lp-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l-~~L~~l~l~~N~l~~~ 479 (849)
+|+|++..|..|+++++|++|++++ +..+| ..+..+++|+.|+|++|+|++..|..|..+ ++|+.|+|++|||+|+
T Consensus 503 ~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~ 582 (635)
T 4g8a_A 503 QCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 582 (635)
T ss_dssp TSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCS
T ss_pred CCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCccc
Confidence 9999999999999999999999986 66665 568999999999999999999999999998 6899999999999999
Q ss_pred CCC
Q 042123 480 VPN 482 (849)
Q Consensus 480 ~~~ 482 (849)
|..
T Consensus 583 C~~ 585 (635)
T 4g8a_A 583 CEH 585 (635)
T ss_dssp GGG
T ss_pred CCc
Confidence 974
No 22
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=3.4e-47 Score=399.73 Aligned_cols=243 Identities=26% Similarity=0.483 Sum_probs=193.3
Q ss_pred cCCCcCceecCCccceEEEEEec------CCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCC
Q 042123 588 NDFDAKYCIGNGGHASVYRAELP------SGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHAR 650 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~ 650 (849)
++|.+.+.||+|+||+||+|++. ++..||||+++.. .....++|.+|+. +++|+|.+++
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~----~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~ 88 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA----SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGD 88 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC----CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC----ChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCC
Confidence 56788899999999999999763 4788999998753 2334567888866 4789999999
Q ss_pred eeEEEEEeccCCChhhhhcccc----------cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCC
Q 042123 651 HSFLLYEFLERGSLAAILNTDA----------AAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEY 720 (849)
Q Consensus 651 ~~~lV~e~~~~gsL~~~l~~~~----------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~ 720 (849)
..++|||||++|+|.++++... ....++|.++.+|+.|||.||+|||++ +|+||||||+|||+++++
T Consensus 89 ~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~ 165 (299)
T 4asz_A 89 PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENL 165 (299)
T ss_dssp SEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGG
T ss_pred EEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCC
Confidence 9999999999999999997532 234699999999999999999999998 999999999999999999
Q ss_pred cEEEeeecCCcccCCCCCCe--eeccCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccccccccc
Q 042123 721 EAHVADFGIAKSLKPDSSNW--TEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIK-GKHPRDFLSSISSSSLNTD 797 (849)
Q Consensus 721 ~~kl~DfG~a~~~~~~~~~~--~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~t-g~~Pf~~~~~~~~~~~~~~ 797 (849)
.+||+|||+|+......... ....||+.|||||++.+..|+.++|||||||++|||+| |+.||..... .
T Consensus 166 ~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~--------~ 237 (299)
T 4asz_A 166 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN--------N 237 (299)
T ss_dssp CEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH--------H
T ss_pred cEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH--------H
Confidence 99999999998765433221 22468999999999999999999999999999999998 8999975432 1
Q ss_pred cccccccCCCCCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 798 VALDQMLDPRLPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
+....+..+..+..+... +.++.+++.+||+.||++||||+||++.|+
T Consensus 238 ~~~~~i~~~~~~~~p~~~---~~~~~~li~~cl~~dP~~RPs~~~i~~~L~ 285 (299)
T 4asz_A 238 EVIECITQGRVLQRPRTC---PQEVYELMLGCWQREPHMRKNIKGIHTLLQ 285 (299)
T ss_dssp HHHHHHHHTCCCCCCTTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHcCCCCCCCccc---hHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 222223333222222222 234788999999999999999999988774
No 23
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1.5e-46 Score=400.43 Aligned_cols=242 Identities=27% Similarity=0.504 Sum_probs=187.9
Q ss_pred cCCCcCceecCCccceEEEEEec------CCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCC
Q 042123 588 NDFDAKYCIGNGGHASVYRAELP------SGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHAR 650 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~ 650 (849)
++|...++||+|+||+||+|++. +++.||||+++.. .....++|.+|+. +++|+|.+.+
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~----~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~ 116 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA----SESARQDFQREAELLTMLQHQHIVRFFGVCTEGR 116 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC----SHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC----CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC
Confidence 46777889999999999999764 4788999998753 2334567888866 4789999999
Q ss_pred eeEEEEEeccCCChhhhhcccc------------cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecC
Q 042123 651 HSFLLYEFLERGSLAAILNTDA------------AAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDL 718 (849)
Q Consensus 651 ~~~lV~e~~~~gsL~~~l~~~~------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~ 718 (849)
..++|||||++|+|.++++... ....++|.++.+|+.|||.||+|||+. +|+||||||+|||+++
T Consensus 117 ~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~ 193 (329)
T 4aoj_A 117 PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQ 193 (329)
T ss_dssp SEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEET
T ss_pred EEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECC
Confidence 9999999999999999996532 124599999999999999999999998 9999999999999999
Q ss_pred CCcEEEeeecCCcccCCCCC--CeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccccccc
Q 042123 719 EYEAHVADFGIAKSLKPDSS--NWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIK-GKHPRDFLSSISSSSLN 795 (849)
Q Consensus 719 ~~~~kl~DfG~a~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~t-g~~Pf~~~~~~~~~~~~ 795 (849)
++.+||+|||+|+....... ......||+.|||||++.+..|+.++|||||||++|||+| |+.||......
T Consensus 194 ~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~------ 267 (329)
T 4aoj_A 194 GLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT------ 267 (329)
T ss_dssp TTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHH------
T ss_pred CCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHH------
Confidence 99999999999987654322 2344679999999999999999999999999999999999 89999754321
Q ss_pred cccccccccCC-CCCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 796 TDVALDQMLDP-RLPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 796 ~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
.....+..+ +.+.+... ..++.+++.+||+.||++||||+||+++|+
T Consensus 268 --~~~~~i~~g~~~~~p~~~----~~~~~~li~~cl~~dP~~RPs~~ei~~~L~ 315 (329)
T 4aoj_A 268 --EAIDCITQGRELERPRAC----PPEVYAIMRGCWQREPQQRHSIKDVHARLQ 315 (329)
T ss_dssp --HHHHHHHHTCCCCCCTTC----CHHHHHHHHHHCCSSTTTSCCHHHHHHHHH
T ss_pred --HHHHHHHcCCCCCCcccc----cHHHHHHHHHHcCcChhHCcCHHHHHHHHH
Confidence 122222222 22222222 234788999999999999999999999885
No 24
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=7.2e-47 Score=401.61 Aligned_cols=239 Identities=26% Similarity=0.379 Sum_probs=192.9
Q ss_pred cCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHHH-----------HHhhceeecCCeeEEE
Q 042123 588 NDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTEV-----------EAFYGFCSHARHSFLL 655 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~ei-----------~~~~~~~~~~~~~~lV 655 (849)
..|+..+.||+|+||+||+|+. .+|+.||||++....... .+.+.+|+ .++++++.+++..|+|
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~----~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iv 149 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR----RELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVV 149 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSS----GGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhH----HHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 4688899999999999999965 579999999986532222 12233343 3578889999999999
Q ss_pred EEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccCC
Q 042123 656 YEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLKP 735 (849)
Q Consensus 656 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~~ 735 (849)
||||++|+|.+++.. ..+++.++..++.||+.||+|||++ +|+||||||+|||++.+|.+||+|||+|+.+..
T Consensus 150 mEy~~gg~L~~~l~~----~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 222 (346)
T 4fih_A 150 MEFLEGGALTDIVTH----TRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK 222 (346)
T ss_dssp ECCCTTEEHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred EeCCCCCcHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCC
Confidence 999999999999864 3499999999999999999999999 999999999999999999999999999998776
Q ss_pred CCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCChhh
Q 042123 736 DSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPAPSRSA 815 (849)
Q Consensus 736 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 815 (849)
........+||+.|||||++.+..|+.++||||+||++|||++|+.||...... .....+.+. .+......
T Consensus 223 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~--------~~~~~i~~~-~~~~~~~~ 293 (346)
T 4fih_A 223 EVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL--------KAMKMIRDN-LPPRLKNL 293 (346)
T ss_dssp SSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--------HHHHHHHHS-SCCCCSCG
T ss_pred CCCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH--------HHHHHHHcC-CCCCCCcc
Confidence 655567789999999999999999999999999999999999999999743321 111111111 11111112
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 816 QEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 816 ~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
......+.+++.+||++||++|||++|+++|
T Consensus 294 ~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 294 HKVSPSLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp GGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 2233458899999999999999999999886
No 25
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=8.5e-47 Score=401.70 Aligned_cols=242 Identities=20% Similarity=0.319 Sum_probs=190.2
Q ss_pred cCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeEEE
Q 042123 588 NDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSFLL 655 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~lV 655 (849)
++|++.+.||+|+||+||+|+. .+|+.||||++..... .....+.+.+|+. ++++++.+++..|+|
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~--~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiV 101 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRM--SSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIV 101 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTS--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHC--CHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEE
Confidence 6899999999999999999965 5799999999975432 2233456677755 378888899999999
Q ss_pred EEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccCC
Q 042123 656 YEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLKP 735 (849)
Q Consensus 656 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~~ 735 (849)
||||++|+|.+++.... ...+++.+++.|+.||+.||+|||++ +|+||||||+|||++.+|.+||+|||+|+....
T Consensus 102 mEy~~gg~L~~~i~~~~-~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 177 (350)
T 4b9d_A 102 MDYCEGGDLFKRINAQK-GVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS 177 (350)
T ss_dssp EECCTTCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCH
T ss_pred EeCCCCCcHHHHHHHcC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecC
Confidence 99999999999996543 24578999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCChhh
Q 042123 736 DSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPAPSRSA 815 (849)
Q Consensus 736 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 815 (849)
........+||+.|||||++.+..|+.++||||+||++|||++|+.||...+. ......+.....+....
T Consensus 178 ~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~--------~~~~~~i~~~~~~~~~~-- 247 (350)
T 4b9d_A 178 TVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSM--------KNLVLKIISGSFPPVSL-- 247 (350)
T ss_dssp HHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH--------HHHHHHHHHTCCCCCCT--
T ss_pred CcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--------HHHHHHHHcCCCCCCCc--
Confidence 33334456899999999999999999999999999999999999999974332 12223333333322211
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 816 QEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 816 ~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
.....+.+++.+||++||++|||++|+++|
T Consensus 248 -~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 248 -HYSYDLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp -TSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred -cCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 122347889999999999999999999875
No 26
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=1.3e-46 Score=442.16 Aligned_cols=448 Identities=19% Similarity=0.269 Sum_probs=337.5
Q ss_pred CCCCEEeCcCCccccCCCccccCCCCCCEeeCCCCcCcccc--cc--cccccCCCCCccccCeEeccCCcccccCCccCC
Q 042123 30 PHLAYLDLTWNGFFGTIPPQISNLSNLRYLYLGSNQFSGNI--LA--EVSSESSGGNLRYMSRLVINDNSLSGFIPPHIG 105 (849)
Q Consensus 30 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~--~~--~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 105 (849)
.+++.|+|++|++.+.+|++|+++++|++|+|++|.+.... .. ......+...+..|+ +++++|.+.+.+|..+.
T Consensus 81 ~~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~-l~l~~~~l~~~~~~~~~ 159 (636)
T 4eco_A 81 GRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMR-MHYQKTFVDYDPREDFS 159 (636)
T ss_dssp CCEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHH-THHHHHHTCCCGGGGSC
T ss_pred CCEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHHHHHHH-hhHHHhhhccCchhhHH
Confidence 57999999999999999999999999999999999762110 00 000000001145566 77777777766665554
Q ss_pred CC-------------------CCCCEEEcc--CCcccCCCCCCCcCCCCCceeeccCcccccc-----------------
Q 042123 106 NL-------------------KFLSQLDLT--NNKFSGPIPLSFDNLSNLIFLYLYGNLLSGS----------------- 147 (849)
Q Consensus 106 ~l-------------------~~L~~L~Ls--~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~----------------- 147 (849)
.+ ..++.+.+. +|++++ +|.+|.++++|++|+|++|.+++.
T Consensus 160 ~~~~~l~~~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ 238 (636)
T 4eco_A 160 DLIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQY 238 (636)
T ss_dssp HHHHHHHHHCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHH
T ss_pred HHHHHHhhcCccccccccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhccc
Confidence 11 122222332 578887 788899999999999999998875
Q ss_pred cccccC--CCCCCCEEEcCCCcccccCCcCCCCCCCCCEEEccCCC-CcC-cCcccccCC------CCCCEEeccCCcCc
Q 042123 148 ILSSLG--KLKSLFDLQLNDNQLIGYIPRPFSNLTSVSTLRLSRND-LFG-SIPDEIGKM------RSLSVLDLNQNQFK 217 (849)
Q Consensus 148 ~~~~~~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~-~~~~~~~~l------~~L~~L~L~~N~l~ 217 (849)
+|..++ ++++|++|+|++|++.+..|..|.++++|++|+|++|+ +++ .+|..+..+ ++|++|++++|+++
T Consensus 239 ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~ 318 (636)
T 4eco_A 239 KTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK 318 (636)
T ss_dssp TTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS
T ss_pred CchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC
Confidence 788888 89999999999999888888889999999999999998 887 788877776 88999999999998
Q ss_pred cCCCc--CccCccccchhhhccccccCCCCcchhhh-hhhhhhccCcCCCCCCCcccCCCCC-cceeeecccccccccCC
Q 042123 218 GVLPP--SISNLTNLKELALLYNHLSGSIPPSLGNL-ILRQLLLSGNHFTGYLPYNICRGGA-LEIFTVSENHFQGTIPT 293 (849)
Q Consensus 218 ~~~~~--~~~~l~~L~~L~L~~N~l~~~~p~~~~~~-~L~~L~L~~n~i~~~~~~~~~~~~~-L~~L~l~~N~l~~~~~~ 293 (849)
.+|. .++.+++|++|++++|.++|.+| .+..+ .|+.|++++|+++ .+|..+..+++ |+.|++++|.++ .+|.
T Consensus 319 -~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~ 394 (636)
T 4eco_A 319 -TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPN 394 (636)
T ss_dssp -SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCS
T ss_pred -ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccch
Confidence 6777 88889999999999999887888 55554 4888888888888 66777788877 888888888888 6677
Q ss_pred CCCCcc--cccEEEccCccccCchhhhhC-------CCCCCCEEeccCccccCcccccCCCCCCCcEEeccCCccccCCC
Q 042123 294 SLRNCT--SLIRVRLNGNNLTGNISEALG-------IYPNLTFIDLSRNNFYGEISSNWGKFPKLGTLNVSMNNITGGLP 364 (849)
Q Consensus 294 ~~~~l~--~L~~L~L~~n~l~~~~~~~~~-------~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p 364 (849)
.+..++ +|+.|++++|.+++..|..+. .+++|++|+|++|++.+..+..+..+++|++|+|++|.++ .+|
T Consensus 395 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~ 473 (636)
T 4eco_A 395 IFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT-EIP 473 (636)
T ss_dssp CCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCC
T ss_pred hhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC-CcC
Confidence 776654 788888888888877777777 6778888888888888555555556788888888888888 444
Q ss_pred CC-cccc-------ccccccccccccccccCchhhc--CCCCCcEEEccCccccccCcccccccccccccccccCCCCCh
Q 042123 365 RE-IGNS-------SQLQAFDLSLNHIVGEIPKELG--KLNPLTKLILRGNQITGRLPKEIGSLTKLEYLDFSAIGELPS 434 (849)
Q Consensus 365 ~~-~~~l-------~~L~~L~L~~N~i~~~~~~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~l~~lp~ 434 (849)
.. +..+ ++|+.|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|..+..+++|++|+++...
T Consensus 474 ~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~---- 547 (636)
T 4eco_A 474 KNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQR---- 547 (636)
T ss_dssp SSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCB----
T ss_pred HHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCc----
Confidence 43 3322 27888888888887 5666666 78888888888888875 66666666666665555421
Q ss_pred hhhcccccceeccCCcccccCCCccccccCCCcEEeccCCccccCCCCCcccccCcccccccCCCccCC
Q 042123 435 QICNMKSLEKLNLSHNNLSGSIPSCFEGMHGLSFIDMSYNELQCPVPNSTTFRGASVEALKGNKGLCGS 503 (849)
Q Consensus 435 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~c~~ 503 (849)
++++|++.+.+|..+..+++|+.|+|++|++ +.+|... ++......+.+|+..|..
T Consensus 548 -----------~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~-~~~L~~L~Ls~N~l~~~~ 603 (636)
T 4eco_A 548 -----------DAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKI-TPNISVLDIKDNPNISID 603 (636)
T ss_dssp -----------CTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCC-CTTCCEEECCSCTTCEEE
T ss_pred -----------ccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhH-hCcCCEEECcCCCCcccc
Confidence 4578999999999999999999999999999 6677642 244555566777766543
No 27
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=6.8e-46 Score=431.09 Aligned_cols=452 Identities=19% Similarity=0.190 Sum_probs=357.6
Q ss_pred CCEEeCcCCccccCCCccccCCCCCCEeeCCCCcCcccccccccccCCCCCccccCeEeccCCcccccCCccCCCCCCCC
Q 042123 32 LAYLDLTWNGFFGTIPPQISNLSNLRYLYLGSNQFSGNILAEVSSESSGGNLRYMSRLVINDNSLSGFIPPHIGNLKFLS 111 (849)
Q Consensus 32 L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 111 (849)
....|+++|+++.+++ .+. ++|++|+|++|++++. ....|+++++|++|+|++|.+++..|.+|.++++|+
T Consensus 7 ~~~c~~~~~~l~~ip~-~~~--~~L~~L~Ls~n~l~~~------~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~ 77 (549)
T 2z81_A 7 SGVCDGRSRSFTSIPS-GLT--AAMKSLDLSFNKITYI------GHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLE 77 (549)
T ss_dssp TSEEECTTSCCSSCCS-CCC--TTCCEEECCSSCCCEE------CSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred CceEECCCCccccccc-cCC--CCccEEECcCCccCcc------ChhhhhcCCcccEEECCCCCcCccChhhccccccCC
Confidence 3446888999976555 343 7899999999999843 345678999999999999999999999999999999
Q ss_pred EEEccCCcccCCCCCCCcCCCCCceeeccCcccccc-cccccCCCCCCCEEEcCCCc-ccccCCcCCCCCCCCCEEEccC
Q 042123 112 QLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGS-ILSSLGKLKSLFDLQLNDNQ-LIGYIPRPFSNLTSVSTLRLSR 189 (849)
Q Consensus 112 ~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~Ls~ 189 (849)
+|+|++|++++..|.+|.++++|++|+|++|.+++. .+..|+++++|++|++++|. +..+.+..|.++++|++|++++
T Consensus 78 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~ 157 (549)
T 2z81_A 78 HLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKA 157 (549)
T ss_dssp EEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEE
T ss_pred EEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccC
Confidence 999999999988888899999999999999999863 56789999999999999998 6777778999999999999999
Q ss_pred CCCcCcCcccccCCCCCCEEeccCCcCccCCCcCccCccccchhhhccccccCCC--Ccchh--hhhhhhhhccCcCCCC
Q 042123 190 NDLFGSIPDEIGKMRSLSVLDLNQNQFKGVLPPSISNLTNLKELALLYNHLSGSI--PPSLG--NLILRQLLLSGNHFTG 265 (849)
Q Consensus 190 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~--p~~~~--~~~L~~L~L~~n~i~~ 265 (849)
|++++..|..+..+++|++|++++|.+....+..+..+++|++|++++|++++.. |..+. ...|+.|++++|.+++
T Consensus 158 n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~ 237 (549)
T 2z81_A 158 LSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTD 237 (549)
T ss_dssp TTCCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEH
T ss_pred CcccccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccch
Confidence 9999889999999999999999999987443333467899999999999998632 22221 2348999999998876
Q ss_pred CCCc----ccCCCCCcceeeecccccccccC------CCC-----------------------------CCcccccEEEc
Q 042123 266 YLPY----NICRGGALEIFTVSENHFQGTIP------TSL-----------------------------RNCTSLIRVRL 306 (849)
Q Consensus 266 ~~~~----~~~~~~~L~~L~l~~N~l~~~~~------~~~-----------------------------~~l~~L~~L~L 306 (849)
..+. .+..+.+|+.+++++|.+.+... ..+ ....+|+.|++
T Consensus 238 ~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l 317 (549)
T 2z81_A 238 ESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITV 317 (549)
T ss_dssp HHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEE
T ss_pred hHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEe
Confidence 4433 34556788889998888765311 011 11246778888
Q ss_pred cCccccCchhhhhCCCCCCCEEeccCccccCccc---ccCCCCCCCcEEeccCCccccCCC--CCccccccccccccccc
Q 042123 307 NGNNLTGNISEALGIYPNLTFIDLSRNNFYGEIS---SNWGKFPKLGTLNVSMNNITGGLP--REIGNSSQLQAFDLSLN 381 (849)
Q Consensus 307 ~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~---~~~~~l~~L~~L~Ls~N~i~~~~p--~~~~~l~~L~~L~L~~N 381 (849)
++|.++..+...+..+++|++|+|++|++.+..| ..+..+++|++|++++|++++..+ ..+..+++|++|++++|
T Consensus 318 ~~n~l~~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N 397 (549)
T 2z81_A 318 ENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRN 397 (549)
T ss_dssp ESSCCCCCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTC
T ss_pred ccCccccCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCC
Confidence 8888876555555678899999999999887653 347788899999999998885432 45788889999999999
Q ss_pred cccccCchhhcCCCCCcEEEccCccccccCccccccccccccccccc--CCCCChhhhcccccceeccCCcccccCCCcc
Q 042123 382 HIVGEIPKELGKLNPLTKLILRGNQITGRLPKEIGSLTKLEYLDFSA--IGELPSQICNMKSLEKLNLSHNNLSGSIPSC 459 (849)
Q Consensus 382 ~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~--l~~lp~~~~~l~~L~~L~L~~N~l~~~~p~~ 459 (849)
+++ .+|..+..+++|++|++++|+++ .+|..+. ++|++|++++ +..++ ..+++|+.|+|++|+|+ .+|.
T Consensus 398 ~l~-~lp~~~~~~~~L~~L~Ls~N~l~-~l~~~~~--~~L~~L~Ls~N~l~~~~---~~l~~L~~L~Ls~N~l~-~ip~- 468 (549)
T 2z81_A 398 TFH-PMPDSCQWPEKMRFLNLSSTGIR-VVKTCIP--QTLEVLDVSNNNLDSFS---LFLPRLQELYISRNKLK-TLPD- 468 (549)
T ss_dssp CCC-CCCSCCCCCTTCCEEECTTSCCS-CCCTTSC--TTCSEEECCSSCCSCCC---CCCTTCCEEECCSSCCS-SCCC-
T ss_pred CCc-cCChhhcccccccEEECCCCCcc-cccchhc--CCceEEECCCCChhhhc---ccCChhcEEECCCCccC-cCCC-
Confidence 988 67888888889999999999887 4454443 5788888876 34433 57889999999999998 5665
Q ss_pred ccccCCCcEEeccCCccccCCCCC-cccccCcccccccCCCcc
Q 042123 460 FEGMHGLSFIDMSYNELQCPVPNS-TTFRGASVEALKGNKGLC 501 (849)
Q Consensus 460 ~~~l~~L~~l~l~~N~l~~~~~~~-~~~~~~~~~~~~~~~~~c 501 (849)
...+++|+.|+|++|++++.+|.. ..+.......+.+|+..|
T Consensus 469 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 511 (549)
T 2z81_A 469 ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 511 (549)
T ss_dssp GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCC
T ss_pred cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccC
Confidence 467899999999999999877653 233444555566776544
No 28
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=3.2e-45 Score=422.30 Aligned_cols=446 Identities=18% Similarity=0.167 Sum_probs=366.8
Q ss_pred CEEeCcCCccccCCCccccCCCCCCEeeCCCCcCcccccccccccCCCCCccccCeEeccCCcccccCCccCCCCCCCCE
Q 042123 33 AYLDLTWNGFFGTIPPQISNLSNLRYLYLGSNQFSGNILAEVSSESSGGNLRYMSRLVINDNSLSGFIPPHIGNLKFLSQ 112 (849)
Q Consensus 33 ~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 112 (849)
++||+++|++++ +|..+. ++|++|+|++|++++.. ...|.++++|++|+|++|.|++..|..|+++++|++
T Consensus 3 ~~l~ls~n~l~~-ip~~~~--~~L~~L~Ls~n~i~~~~------~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 73 (520)
T 2z7x_B 3 FLVDRSKNGLIH-VPKDLS--QKTTILNISQNYISELW------TSDILSLSKLRILIISHNRIQYLDISVFKFNQELEY 73 (520)
T ss_dssp CEEECTTSCCSS-CCCSCC--TTCSEEECCSSCCCCCC------HHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCE
T ss_pred ceEecCCCCccc-cccccc--ccccEEECCCCcccccC------hhhccccccccEEecCCCccCCcChHHhhcccCCCE
Confidence 689999999985 455554 89999999999998533 234678999999999999999988999999999999
Q ss_pred EEccCCcccCCCCCCCcCCCCCceeeccCccccc-ccccccCCCCCCCEEEcCCCcccccCCcCCCCCCCC--CEEEccC
Q 042123 113 LDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSG-SILSSLGKLKSLFDLQLNDNQLIGYIPRPFSNLTSV--STLRLSR 189 (849)
Q Consensus 113 L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L--~~L~Ls~ 189 (849)
|+|++|+|+++ |.. .+++|++|+|++|++++ ..|..|+++++|++|+|++|++.+ ..|..+++| ++|++++
T Consensus 74 L~Ls~N~l~~l-p~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~ 147 (520)
T 2z7x_B 74 LDLSHNKLVKI-SCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVL 147 (520)
T ss_dssp EECCSSCCCEE-ECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEE
T ss_pred EecCCCceeec-Ccc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeec
Confidence 99999999954 444 89999999999999987 367899999999999999999986 467888888 9999999
Q ss_pred CCC--cCcCcccccCCC-CCCEEeccCCcCccCCC-cCccCccccchhhhcccc-------ccCCCCcchhhh-hhhhhh
Q 042123 190 NDL--FGSIPDEIGKMR-SLSVLDLNQNQFKGVLP-PSISNLTNLKELALLYNH-------LSGSIPPSLGNL-ILRQLL 257 (849)
Q Consensus 190 N~l--~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~-------l~~~~p~~~~~~-~L~~L~ 257 (849)
|++ .+..|..+..+. +...+++++|.+.+..+ ..+..+++|+.|++++|. +.+.+| .+... .|+.|+
T Consensus 148 n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~ 226 (520)
T 2z7x_B 148 GETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLT 226 (520)
T ss_dssp CTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEE
T ss_pred ccccccccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhcc
Confidence 999 778888887766 35567899999876544 468899999999999997 555555 33333 499999
Q ss_pred ccCcCCCCCCCcccC---CCCCcceeeecccccccccCCCC-----CCcccccEEEccCccccCchhhhhCCC---CCCC
Q 042123 258 LSGNHFTGYLPYNIC---RGGALEIFTVSENHFQGTIPTSL-----RNCTSLIRVRLNGNNLTGNISEALGIY---PNLT 326 (849)
Q Consensus 258 L~~n~i~~~~~~~~~---~~~~L~~L~l~~N~l~~~~~~~~-----~~l~~L~~L~L~~n~l~~~~~~~~~~l---~~L~ 326 (849)
+++|.+++..+..+. ..++|+.|++++|++++.+|..+ ..+++|+.+++++|.+ ..+...+..+ .+|+
T Consensus 227 l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~-~~p~~~~~~~~~~~~L~ 305 (520)
T 2z7x_B 227 LNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF-GFPQSYIYEIFSNMNIK 305 (520)
T ss_dssp EEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC-CSCTHHHHHHHHTCCCS
T ss_pred ccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce-ecchhhhhcccccCcee
Confidence 999987753222211 13589999999999999999998 8999999999999999 4443555444 6899
Q ss_pred EEeccCccccCcccccCCCCCCCcEEeccCCccccCCCCCccccccccccccccccccc--cCchhhcCCCCCcEEEccC
Q 042123 327 FIDLSRNNFYGEISSNWGKFPKLGTLNVSMNNITGGLPREIGNSSQLQAFDLSLNHIVG--EIPKELGKLNPLTKLILRG 404 (849)
Q Consensus 327 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~N~i~~--~~~~~~~~l~~L~~L~L~~ 404 (849)
.|++++|.+.... .+..+++|++|++++|.+++..|..+..+++|++|+|++|++++ .+|..+..+++|++|+|++
T Consensus 306 ~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~ 383 (520)
T 2z7x_B 306 NFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQ 383 (520)
T ss_dssp EEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCS
T ss_pred EEEcCCCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCC
Confidence 9999999987432 13688999999999999998899999999999999999999997 5668899999999999999
Q ss_pred ccccccCcc-cccccccccccccccC---CCCChhhhcccccceeccCCcccccCCCccccccCCCcEEeccCCccccCC
Q 042123 405 NQITGRLPK-EIGSLTKLEYLDFSAI---GELPSQICNMKSLEKLNLSHNNLSGSIPSCFEGMHGLSFIDMSYNELQCPV 480 (849)
Q Consensus 405 N~l~~~~p~-~~~~l~~L~~L~l~~l---~~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~ 480 (849)
|++++.+|. .+..+++|++|++++. +.+|..+. ++|+.|+|++|+|+ .+|..+..+++|+.|++++|+++. +
T Consensus 384 N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~-l 459 (520)
T 2z7x_B 384 NSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKS-V 459 (520)
T ss_dssp SCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-C
T ss_pred CcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCc-c
Confidence 999985665 4889999999999873 34444443 79999999999999 778777799999999999999995 4
Q ss_pred CCC--cccccCcccccccCCCcc
Q 042123 481 PNS--TTFRGASVEALKGNKGLC 501 (849)
Q Consensus 481 ~~~--~~~~~~~~~~~~~~~~~c 501 (849)
|.. ..+.......+.+|+..|
T Consensus 460 ~~~~~~~l~~L~~L~l~~N~~~c 482 (520)
T 2z7x_B 460 PDGIFDRLTSLQKIWLHTNPWDC 482 (520)
T ss_dssp CTTTTTTCTTCCEEECCSSCBCC
T ss_pred CHHHhccCCcccEEECcCCCCcc
Confidence 443 223334445566776555
No 29
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1e-45 Score=402.47 Aligned_cols=239 Identities=26% Similarity=0.372 Sum_probs=193.0
Q ss_pred cCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeEEE
Q 042123 588 NDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSFLL 655 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~lV 655 (849)
+.|+..+.||+|+||.||+|+. .+|+.||||++....... .+.+.+|+. ++++++..++..|+|
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~----~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iV 226 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR----RELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVV 226 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSS----GGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhH----HHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEE
Confidence 5689999999999999999965 579999999986542222 123444433 478888999999999
Q ss_pred EEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccCC
Q 042123 656 YEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLKP 735 (849)
Q Consensus 656 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~~ 735 (849)
||||++|+|.+++.. ..+++.++..++.||+.||+|||++ +|+||||||+|||++.+|.+||+|||+|+.+..
T Consensus 227 mEy~~gG~L~~~i~~----~~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~ 299 (423)
T 4fie_A 227 MEFLEGGALTDIVTH----TRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK 299 (423)
T ss_dssp EECCTTEEHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCS
T ss_pred EeCCCCCcHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCC
Confidence 999999999999854 3499999999999999999999999 999999999999999999999999999998776
Q ss_pred CCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCChhh
Q 042123 736 DSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPAPSRSA 815 (849)
Q Consensus 736 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 815 (849)
........+||+.|||||++.+..|+.++||||+||++|||++|+.||......... ........+......
T Consensus 300 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~-----~~i~~~~~~~~~~~~--- 371 (423)
T 4fie_A 300 EVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM-----KMIRDNLPPRLKNLH--- 371 (423)
T ss_dssp SCCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH-----HHHHHSCCCCCSCTT---
T ss_pred CCccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHH-----HHHHcCCCCCCcccc---
Confidence 655567789999999999999999999999999999999999999999744321110 011111111222211
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 816 QEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 816 ~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
.....+.+|+.+||++||++|||++|+++|
T Consensus 372 -~~s~~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 372 -KVSPSLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp -SSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred -cCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 122347889999999999999999999886
No 30
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=8.1e-46 Score=387.53 Aligned_cols=238 Identities=19% Similarity=0.314 Sum_probs=191.9
Q ss_pred cCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeEEE
Q 042123 588 NDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSFLL 655 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~lV 655 (849)
++|++.+.||+|+||+||+|+. .+|+.||||++.+... ......+.+.+|+. ++++++.+++..|+|
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~-~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yiv 110 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI-IKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG 110 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHH-HHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHC-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 5799999999999999999954 5799999999864311 01122345566654 477888889999999
Q ss_pred EEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccCC
Q 042123 656 YEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLKP 735 (849)
Q Consensus 656 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~~ 735 (849)
||||++|+|.+++.+. ..+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.+..
T Consensus 111 mEy~~gG~L~~~i~~~---~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~ 184 (311)
T 4aw0_A 111 LSYAKNGELLKYIRKI---GSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSP 184 (311)
T ss_dssp ECCCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCC
Confidence 9999999999999653 3599999999999999999999999 999999999999999999999999999997754
Q ss_pred CC--CCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCh
Q 042123 736 DS--SNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPAPSR 813 (849)
Q Consensus 736 ~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 813 (849)
.. ......+||+.|||||++.+..|+.++||||+||++|||++|+.||...+. ......+.......+..
T Consensus 185 ~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~--------~~~~~~i~~~~~~~p~~ 256 (311)
T 4aw0_A 185 ESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE--------GLIFAKIIKLEYDFPEK 256 (311)
T ss_dssp TTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHTCCCCCTT
T ss_pred CCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHcCCCCCCcc
Confidence 32 234567899999999999999999999999999999999999999974321 12222333333322222
Q ss_pred hhHHHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 042123 814 SAQEKLISIMEVAFSCFNESPESRPTMKIIS 844 (849)
Q Consensus 814 ~~~~~~~~l~~li~~cl~~dP~~RPt~~eil 844 (849)
. ..++.+++.+|+++||++|||++|+.
T Consensus 257 ~----s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 257 F----FPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp C----CHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred c----CHHHHHHHHHHccCCHhHCcChHHHc
Confidence 2 23478899999999999999999864
No 31
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=8.7e-46 Score=397.63 Aligned_cols=251 Identities=22% Similarity=0.402 Sum_probs=196.0
Q ss_pred HHHHHHhcCCCcCceecCCccceEEEEEec------CCcEEEEEEecccCCCCchhhHHHHHHHHH------------Hh
Q 042123 581 DEIVKATNDFDAKYCIGNGGHASVYRAELP------SGEVVAVKKFHSLLPCDQTVDQKEFLTEVE------------AF 642 (849)
Q Consensus 581 ~~~~~~~~~f~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~ei~------------~~ 642 (849)
++++...++|++.+.||+|+||+||+|++. .++.||||++.... .....+.+.+|+. ++
T Consensus 57 ~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~---~~~~~~~~~~E~~il~~l~hhpnIV~l 133 (353)
T 4ase_A 57 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA---THSEHRALMSELKILIHIGHHLNVVNL 133 (353)
T ss_dssp HHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred cccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEcccc---ChHHHHHHHHHHHHHHHcCCCCcEEEE
Confidence 455666789999999999999999999753 24679999987542 2223455666654 36
Q ss_pred hceeec-CCeeEEEEEeccCCChhhhhccccc-------------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecC
Q 042123 643 YGFCSH-ARHSFLLYEFLERGSLAAILNTDAA-------------AQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRD 708 (849)
Q Consensus 643 ~~~~~~-~~~~~lV~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~d 708 (849)
+|+|.+ +...++|||||++|+|.++++.... ...+++.++..++.|||.||+|||++ +|+|||
T Consensus 134 ~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRD 210 (353)
T 4ase_A 134 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRD 210 (353)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSC
T ss_pred EEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCc
Confidence 777765 4578999999999999999965332 23489999999999999999999999 999999
Q ss_pred CCCCCeeecCCCcEEEeeecCCcccCCCCCC--eeeccCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCc
Q 042123 709 ISSKNLLLDLEYEAHVADFGIAKSLKPDSSN--WTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIK-GKHPRDF 785 (849)
Q Consensus 709 lk~~Nill~~~~~~kl~DfG~a~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~t-g~~Pf~~ 785 (849)
|||+|||+++++.+||+|||+|+....+... .....||+.|||||++.+..|+.++|||||||++|||+| |+.||..
T Consensus 211 LK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~ 290 (353)
T 4ase_A 211 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 290 (353)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTT
T ss_pred cCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCC
Confidence 9999999999999999999999977654332 234578999999999999999999999999999999998 9999974
Q ss_pred cccccccccccccccccccCC-CCCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 786 LSSISSSSLNTDVALDQMLDP-RLPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 786 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
.... +.....+.++ +.+.+...+ .++.+++.+||+.||++||||+||+++|+
T Consensus 291 ~~~~-------~~~~~~i~~g~~~~~p~~~~----~~~~~li~~c~~~dP~~RPt~~eil~~L~ 343 (353)
T 4ase_A 291 VKID-------EEFCRRLKEGTRMRAPDYTT----PEMYQTMLDCWHGEPSQRPTFSELVEHLG 343 (353)
T ss_dssp CCCS-------HHHHHHHHHTCCCCCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCHH-------HHHHHHHHcCCCCCCCccCC----HHHHHHHHHHcCcChhHCcCHHHHHHHHH
Confidence 3311 1111112121 222222222 34788999999999999999999999874
No 32
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=3e-46 Score=395.76 Aligned_cols=243 Identities=21% Similarity=0.267 Sum_probs=187.3
Q ss_pred cCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHH-----HHHHHhhceeecCCeeEEEEEeccC
Q 042123 588 NDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFL-----TEVEAFYGFCSHARHSFLLYEFLER 661 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~-----~ei~~~~~~~~~~~~~~lV~e~~~~ 661 (849)
+.|+..++||+|+||+||+|++ .+|+.||||+++..... ..+...+ .+|.++++++.+++..|+|||||++
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~~---~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~g 134 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR---VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEG 134 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC---THHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTT
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHhH---HHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCC
Confidence 4677888999999999999965 57999999998754221 1111122 2345688999999999999999999
Q ss_pred CChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCC-cEEEeeecCCcccCCCCCC-
Q 042123 662 GSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEY-EAHVADFGIAKSLKPDSSN- 739 (849)
Q Consensus 662 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~-~~kl~DfG~a~~~~~~~~~- 739 (849)
|+|.+++++. ..+++.++..++.||+.||+|||++ +|+||||||+|||++.+| .+||+|||+|+....+...
T Consensus 135 g~L~~~l~~~---~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~ 208 (336)
T 4g3f_A 135 GSLGQLIKQM---GCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGK 208 (336)
T ss_dssp CBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC-------
T ss_pred CcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCccc
Confidence 9999999653 3599999999999999999999999 999999999999999998 6999999999977543221
Q ss_pred ----eeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCChhh
Q 042123 740 ----WTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPAPSRSA 815 (849)
Q Consensus 740 ----~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 815 (849)
....+||+.|||||++.+..|+.++||||+||++|||++|+.||....... ....+.....+. ...+
T Consensus 209 ~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~--------~~~~i~~~~~~~-~~~~ 279 (336)
T 4g3f_A 209 SLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP--------LCLKIASEPPPI-REIP 279 (336)
T ss_dssp -----CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSC--------CHHHHHHSCCGG-GGSC
T ss_pred ceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH--------HHHHHHcCCCCc-hhcC
Confidence 233579999999999999999999999999999999999999997433211 111111111100 0011
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 816 QEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 816 ~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
......+.+++.+||++||++|||+.|++++|.
T Consensus 280 ~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~ 312 (336)
T 4g3f_A 280 PSCAPLTAQAIQEGLRKEPVHRASAMELRRKVG 312 (336)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHH
Confidence 122334788999999999999999999998763
No 33
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=6.2e-45 Score=375.90 Aligned_cols=238 Identities=21% Similarity=0.302 Sum_probs=176.4
Q ss_pred cCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeEEE
Q 042123 588 NDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSFLL 655 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~lV 655 (849)
++|++.+.||+|+||+||+|+. .+|+.||||++.+..... ......+.+|+. ++++++..++..|+|
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv 91 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAK-SDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCC-HHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 6899999999999999999965 579999999987543221 222345666654 477888889999999
Q ss_pred EEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccCC
Q 042123 656 YEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLKP 735 (849)
Q Consensus 656 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~~ 735 (849)
|||+ +|+|.+++.+. ..+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+....
T Consensus 92 mEy~-~g~L~~~l~~~---~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~ 164 (275)
T 3hyh_A 92 IEYA-GNELFDYIVQR---DKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 164 (275)
T ss_dssp EECC-CEEHHHHHHHS---CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC-----
T ss_pred EeCC-CCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCC
Confidence 9999 67999998653 3599999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCeeeccCCccccccccccCCCC-CccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCChh
Q 042123 736 DSSNWTEFAGTCGYIAPELAYTMKI-TEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPAPSRS 814 (849)
Q Consensus 736 ~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 814 (849)
. ......+||+.|||||++.+..| +.++||||+||++|||++|+.||..... ......+.......+...
T Consensus 165 ~-~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~--------~~~~~~i~~~~~~~p~~~ 235 (275)
T 3hyh_A 165 G-NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI--------PVLFKNISNGVYTLPKFL 235 (275)
T ss_dssp -----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHTCCCCCTTS
T ss_pred C-CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCH--------HHHHHHHHcCCCCCCCCC
Confidence 3 33456789999999999998876 5799999999999999999999974321 112222222222222222
Q ss_pred hHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 815 AQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 815 ~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
...+.+++.+||++||++|||++|+++|
T Consensus 236 ----s~~~~~li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 236 ----SPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp ----CHHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred ----CHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 2347789999999999999999999885
No 34
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=1.6e-45 Score=385.60 Aligned_cols=239 Identities=23% Similarity=0.328 Sum_probs=187.1
Q ss_pred cCCCcCceecCCccceEEEEEe----cCCcEEEEEEecccCCCCchhhHHHHHHH-----------HHHhhceeecCCee
Q 042123 588 NDFDAKYCIGNGGHASVYRAEL----PSGEVVAVKKFHSLLPCDQTVDQKEFLTE-----------VEAFYGFCSHARHS 652 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~e-----------i~~~~~~~~~~~~~ 652 (849)
++|++.+.||+|+||+||+|+. .+++.||||+++....... ....+.+| |.++++++.+++..
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~--~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 101 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVR--DRVRTKMERDILVEVNHPFIVKLHYAFQTEGKL 101 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEE--ECC------CCCCCCCCTTEECEEEEEEETTEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChH--HHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEE
Confidence 6799999999999999999965 2478999999865321111 11234445 34578889999999
Q ss_pred EEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcc
Q 042123 653 FLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKS 732 (849)
Q Consensus 653 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~ 732 (849)
|+|||||+||+|.+++.+. ..+++.++..++.||+.||+|||++ +|+||||||+|||++.+|.+||+|||+|+.
T Consensus 102 ~ivmEy~~gg~L~~~l~~~---~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~ 175 (304)
T 3ubd_A 102 YLILDFLRGGDLFTRLSKE---VMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKE 175 (304)
T ss_dssp EEEECCCTTCEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC
T ss_pred EEEEEcCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEeccccccee
Confidence 9999999999999999654 3599999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCC
Q 042123 733 LKPDSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPAPS 812 (849)
Q Consensus 733 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (849)
...........+||+.|||||++.+..|+.++||||+||++|||+||+.||...+. ......+.......+.
T Consensus 176 ~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~--------~~~~~~i~~~~~~~p~ 247 (304)
T 3ubd_A 176 SIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR--------KETMTMILKAKLGMPQ 247 (304)
T ss_dssp -----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHCCCCCCT
T ss_pred ccCCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCH--------HHHHHHHHcCCCCCCC
Confidence 65554555667899999999999999999999999999999999999999974332 1222223333333222
Q ss_pred hhhHHHHHHHHHHHhhccCCCCCCCCCH-----HHHHhh
Q 042123 813 RSAQEKLISIMEVAFSCFNESPESRPTM-----KIISQQ 846 (849)
Q Consensus 813 ~~~~~~~~~l~~li~~cl~~dP~~RPt~-----~eil~~ 846 (849)
.. ..++.+++.+||++||++|||+ +|+++|
T Consensus 248 ~~----s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~H 282 (304)
T 3ubd_A 248 FL----SPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRH 282 (304)
T ss_dssp TS----CHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTS
T ss_pred cC----CHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcC
Confidence 22 2347889999999999999984 688765
No 35
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=6.5e-45 Score=385.44 Aligned_cols=250 Identities=24% Similarity=0.342 Sum_probs=184.1
Q ss_pred cCCCcCceecCCccceEEEEEecCCcEEEEEEecccCCCCchhhHHHHHHHH-----------HHhhceeecCC----ee
Q 042123 588 NDFDAKYCIGNGGHASVYRAELPSGEVVAVKKFHSLLPCDQTVDQKEFLTEV-----------EAFYGFCSHAR----HS 652 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~ei-----------~~~~~~~~~~~----~~ 652 (849)
++|.+.+.||+|+||+||+|++ +|+.||||++.... .....+..|+ .++++++.+++ ..
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~-----~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~ 76 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE-----ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL 76 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGG-----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc-----hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEE
Confidence 4577888999999999999988 58999999986431 1111122233 24677776543 57
Q ss_pred EEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcC-----CCCeEecCCCCCCeeecCCCcEEEeee
Q 042123 653 FLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDC-----FPPIVHRDISSKNLLLDLEYEAHVADF 727 (849)
Q Consensus 653 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~-----~~~ivH~dlk~~Nill~~~~~~kl~Df 727 (849)
|+|||||++|+|.++++.. .++|+++.+++.|+|.||+|||+++ .++|+||||||+|||++.++.+||+||
T Consensus 77 ~lV~Ey~~~gsL~~~l~~~----~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DF 152 (303)
T 3hmm_A 77 WLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 152 (303)
T ss_dssp EEEEECCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCC
T ss_pred EEEecCCCCCcHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeC
Confidence 9999999999999999643 4899999999999999999999752 358999999999999999999999999
Q ss_pred cCCcccCCCCC----CeeeccCCccccccccccCC------CCCccchHHHHHHHHHHHHhCCCCCCcccccccccc---
Q 042123 728 GIAKSLKPDSS----NWTEFAGTCGYIAPELAYTM------KITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSL--- 794 (849)
Q Consensus 728 G~a~~~~~~~~----~~~~~~g~~~y~aPE~~~~~------~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~--- 794 (849)
|+|+....... .....+||+.|||||++.+. .++.++|||||||++|||+||+.||........+..
T Consensus 153 Gla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~ 232 (303)
T 3hmm_A 153 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 232 (303)
T ss_dssp TTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTS
T ss_pred CCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcc
Confidence 99987654332 12345799999999998754 467899999999999999999988764332211110
Q ss_pred ----ccccccccc----cCCCCCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 795 ----NTDVALDQM----LDPRLPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 795 ----~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
........+ .++.++... ...+....+.+++.+||+.||++||||.||++.|+
T Consensus 233 ~~~~~~~~~~~~~~~~~~rp~~p~~~-~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~ 293 (303)
T 3hmm_A 233 PSDPSVEEMRKVVCEQKLRPNIPNRW-QSCEALRVMAKIMRECWYANGAARLTALRIKKTLS 293 (303)
T ss_dssp CSSCCHHHHHHHHTTSCCCCCCCGGG-GSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHH
T ss_pred cccchHHHHHHHHhcccCCCCCCccc-cchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHH
Confidence 011111112 222332211 12345567889999999999999999999999874
No 36
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=9.1e-45 Score=378.15 Aligned_cols=238 Identities=22% Similarity=0.341 Sum_probs=182.4
Q ss_pred CcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHHHHH-----------hhceeec----CCeeEE
Q 042123 591 DAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVEA-----------FYGFCSH----ARHSFL 654 (849)
Q Consensus 591 ~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~~-----------~~~~~~~----~~~~~l 654 (849)
+..+.||+|+||+||+|.+ .+++.||||++..... .....+.+.+|+.. +++++.. +...|+
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~--~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~l 106 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL--TKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhC--CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEE
Confidence 4566899999999999965 5789999999875422 22334567777653 5666543 356899
Q ss_pred EEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecC-CCcEEEeeecCCccc
Q 042123 655 LYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDL-EYEAHVADFGIAKSL 733 (849)
Q Consensus 655 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~-~~~~kl~DfG~a~~~ 733 (849)
|||||++|+|.+++.+. ..+++.++..|+.||+.||+|||++. ++|+||||||+|||++. ++.+||+|||+|+..
T Consensus 107 vmEy~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~ylH~~~-~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~ 182 (290)
T 3fpq_A 107 VTELMTSGTLKTYLKRF---KVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182 (290)
T ss_dssp EEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCCCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred EEeCCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC-CCEEecccChhheeEECCCCCEEEEeCcCCEeC
Confidence 99999999999999653 35899999999999999999999981 13999999999999974 799999999999864
Q ss_pred CCCCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCh
Q 042123 734 KPDSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPAPSR 813 (849)
Q Consensus 734 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 813 (849)
.. ......+||+.|||||++.+ .|+.++|||||||++|||+||+.||...... ......+.....+. .
T Consensus 183 ~~--~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~-------~~~~~~i~~~~~~~--~ 250 (290)
T 3fpq_A 183 RA--SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNA-------AQIYRRVTSGVKPA--S 250 (290)
T ss_dssp CT--TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH-------HHHHHHHTTTCCCG--G
T ss_pred CC--CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcH-------HHHHHHHHcCCCCC--C
Confidence 32 34566789999999998865 6999999999999999999999999643211 11111222221111 1
Q ss_pred hhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 814 SAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 814 ~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
.......++.+++.+||++||++|||++|+++|
T Consensus 251 ~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 251 FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp GGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 111122347889999999999999999999986
No 37
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=3.7e-43 Score=398.11 Aligned_cols=383 Identities=21% Similarity=0.195 Sum_probs=264.1
Q ss_pred CCEeeCCCCcCcccccccccccCCCCCccccCeEeccCCcccccCCccCCCCCCCCEEEccCCccc-CCCCCCCcCCCCC
Q 042123 56 LRYLYLGSNQFSGNILAEVSSESSGGNLRYMSRLVINDNSLSGFIPPHIGNLKFLSQLDLTNNKFS-GPIPLSFDNLSNL 134 (849)
Q Consensus 56 L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~-~~~~~~~~~l~~L 134 (849)
-+.++.++++++. ++. -.++|++|+|++|.|++..|..|.++++|++|+|++|++. .+.+..|.++++|
T Consensus 12 ~~~~~c~~~~l~~-----lp~-----l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L 81 (455)
T 3v47_A 12 GYNAICINRGLHQ-----VPE-----LPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSL 81 (455)
T ss_dssp TTEEECCSSCCSS-----CCC-----CCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTC
T ss_pred ccccCcCCCCccc-----CCC-----CCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccC
Confidence 3467777777762 111 1267788888888888777777888888888888888776 3446677888888
Q ss_pred ceeeccCcccccccccccCCCCCCCEEEcCCCcccccC--CcCCCCCCCCCEEEccCCCCcCcCccc-ccCCCCCCEEec
Q 042123 135 IFLYLYGNLLSGSILSSLGKLKSLFDLQLNDNQLIGYI--PRPFSNLTSVSTLRLSRNDLFGSIPDE-IGKMRSLSVLDL 211 (849)
Q Consensus 135 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~Ls~N~l~~~~~~~-~~~l~~L~~L~L 211 (849)
++|+|++|++++..|..|+++++|++|+|++|++++.. +..|..+++|++|+|++|++++..|.. +.++++|++|++
T Consensus 82 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L 161 (455)
T 3v47_A 82 IILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDL 161 (455)
T ss_dssp CEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEEC
T ss_pred CEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeC
Confidence 88888888887777777888888888888888877633 334777888888888888887666665 677888888888
Q ss_pred cCCcCccCCCcCccCc--cccchhhhccccccCCCCcchhhhhhhhhhccCcCCCCCCCcccCCCCCcceeeeccccccc
Q 042123 212 NQNQFKGVLPPSISNL--TNLKELALLYNHLSGSIPPSLGNLILRQLLLSGNHFTGYLPYNICRGGALEIFTVSENHFQG 289 (849)
Q Consensus 212 ~~N~l~~~~~~~~~~l--~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~N~l~~ 289 (849)
++|++++..+..+..+ .+|+.|++++|.+.+..+..+.... ...+..+++|+.|++++|++++
T Consensus 162 ~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~---------------~~~~~~~~~L~~L~Ls~n~l~~ 226 (455)
T 3v47_A 162 TFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEK---------------CGNPFKNTSITTLDLSGNGFKE 226 (455)
T ss_dssp TTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHH---------------HCCTTTTCEEEEEECTTSCCCH
T ss_pred CCCcccccChhhhhccccccccccccccCcccccchhhccccc---------------cccccccceeeeEecCCCcccc
Confidence 8888877777777665 5677777777777643333221100 0112233456666666666655
Q ss_pred ccCCCCCCc---ccccEEEccCccccCc----------hhhhhC--CCCCCCEEeccCccccCcccccCCCCCCCcEEec
Q 042123 290 TIPTSLRNC---TSLIRVRLNGNNLTGN----------ISEALG--IYPNLTFIDLSRNNFYGEISSNWGKFPKLGTLNV 354 (849)
Q Consensus 290 ~~~~~~~~l---~~L~~L~L~~n~l~~~----------~~~~~~--~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 354 (849)
..|..+... ++|+.|++++|.+.+. .+..+. ..++|+.|++++|++.+..|..|..+++|++|+|
T Consensus 227 ~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 306 (455)
T 3v47_A 227 SMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTL 306 (455)
T ss_dssp HHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred cchhhhhccccccceeeEeeccccccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEEC
Confidence 555444333 5566666665544321 111111 1256777777777777666777777777777777
Q ss_pred cCCccccCCCCCccccccccccccccccccccCchhhcCCCCCcEEEccCccccccCcccccccccccccccccCCCCCh
Q 042123 355 SMNNITGGLPREIGNSSQLQAFDLSLNHIVGEIPKELGKLNPLTKLILRGNQITGRLPKEIGSLTKLEYLDFSAIGELPS 434 (849)
Q Consensus 355 s~N~i~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~l~~lp~ 434 (849)
++|.+++..|..|.++++|+.|+|++|.+++..|..|..+++|++|+|++|++++..|.
T Consensus 307 s~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~--------------------- 365 (455)
T 3v47_A 307 AQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQ--------------------- 365 (455)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTT---------------------
T ss_pred CCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChh---------------------
Confidence 77777766666777777777777777777766667777777777777777777654444
Q ss_pred hhhcccccceeccCCcccccCCCccccccCCCcEEeccCCccccCCCCCc
Q 042123 435 QICNMKSLEKLNLSHNNLSGSIPSCFEGMHGLSFIDMSYNELQCPVPNST 484 (849)
Q Consensus 435 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~ 484 (849)
.+..+++|+.|+|++|+|++..+..|..+++|+.|++++|+|+|+||...
T Consensus 366 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~ 415 (455)
T 3v47_A 366 SFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRID 415 (455)
T ss_dssp TTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTH
T ss_pred hccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCCcch
Confidence 44556678888899999998888889999999999999999999999643
No 38
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=7e-43 Score=395.79 Aligned_cols=380 Identities=20% Similarity=0.191 Sum_probs=305.4
Q ss_pred EecCCCceeeeeCCccCCCCCCCCEEeCcCCccccCCCccccCCCCCCEeeCCCCcCcccccccccccCCCCCccccCeE
Q 042123 10 ISLPNIGVNGTLHDFSFSSFPHLAYLDLTWNGFFGTIPPQISNLSNLRYLYLGSNQFSGNILAEVSSESSGGNLRYMSRL 89 (849)
Q Consensus 10 ~~~~~~~~~~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L 89 (849)
+++.+.++..... -.++|++|||++|+|+++.|..|+++++|++|+|++|++.+. .....|.++++|++|
T Consensus 15 ~~c~~~~l~~lp~-----l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~-----i~~~~~~~l~~L~~L 84 (455)
T 3v47_A 15 AICINRGLHQVPE-----LPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLV-----IRNNTFRGLSSLIIL 84 (455)
T ss_dssp EECCSSCCSSCCC-----CCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCE-----ECTTTTTTCTTCCEE
T ss_pred cCcCCCCcccCCC-----CCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccce-----ECcccccccccCCEE
Confidence 5566666533321 127799999999999988899999999999999999988632 334567788888888
Q ss_pred eccCCcccccCCccCCCCCCCCEEEccCCcccCCCCC--CCcCCCCCceeeccCcccccccccc-cCCCCCCCEEEcCCC
Q 042123 90 VINDNSLSGFIPPHIGNLKFLSQLDLTNNKFSGPIPL--SFDNLSNLIFLYLYGNLLSGSILSS-LGKLKSLFDLQLNDN 166 (849)
Q Consensus 90 ~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~--~~~~l~~L~~L~L~~N~l~~~~~~~-~~~l~~L~~L~L~~N 166 (849)
+|++|.+++..|..|+++++|++|+|++|++++..+. .|.++++|++|+|++|.+++..|.. |.++++|++|+|++|
T Consensus 85 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n 164 (455)
T 3v47_A 85 KLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFN 164 (455)
T ss_dssp ECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTC
T ss_pred eCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCC
Confidence 8888888888888888888888888888888864433 4888888888888888888776665 788888888888888
Q ss_pred cccccCCcCCCCC--CCCCEEEccCCCCcCcCccc--------ccCCCCCCEEeccCCcCccCCCcCccCc---cccchh
Q 042123 167 QLIGYIPRPFSNL--TSVSTLRLSRNDLFGSIPDE--------IGKMRSLSVLDLNQNQFKGVLPPSISNL---TNLKEL 233 (849)
Q Consensus 167 ~l~~~~~~~~~~l--~~L~~L~Ls~N~l~~~~~~~--------~~~l~~L~~L~L~~N~l~~~~~~~~~~l---~~L~~L 233 (849)
++.++.+..+..+ .+|+.|++++|.+....+.. +..+++|++|++++|++++..|..+..+ ++|+.|
T Consensus 165 ~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L 244 (455)
T 3v47_A 165 KVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSL 244 (455)
T ss_dssp CBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEE
T ss_pred cccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeE
Confidence 8888888877766 67888888888887544433 3356788888888888877666666554 678888
Q ss_pred hhccccccCCCCcchhhhhhhhhhccCcCCCCCCCcccCC--CCCcceeeecccccccccCCCCCCcccccEEEccCccc
Q 042123 234 ALLYNHLSGSIPPSLGNLILRQLLLSGNHFTGYLPYNICR--GGALEIFTVSENHFQGTIPTSLRNCTSLIRVRLNGNNL 311 (849)
Q Consensus 234 ~L~~N~l~~~~p~~~~~~~L~~L~L~~n~i~~~~~~~~~~--~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l 311 (849)
++++|.+.+.. +..+.+....+..+.. .++|+.|++++|.+.+..|..+..+++|+.|++++|++
T Consensus 245 ~l~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l 311 (455)
T 3v47_A 245 ILSNSYNMGSS-------------FGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEI 311 (455)
T ss_dssp ECTTCTTTSCC-------------TTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCC
T ss_pred eeccccccccc-------------cchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcc
Confidence 88887765321 1222333333333332 36899999999999999999999999999999999999
Q ss_pred cCchhhhhCCCCCCCEEeccCccccCcccccCCCCCCCcEEeccCCccccCCCCCccccccccccccccccccccCchhh
Q 042123 312 TGNISEALGIYPNLTFIDLSRNNFYGEISSNWGKFPKLGTLNVSMNNITGGLPREIGNSSQLQAFDLSLNHIVGEIPKEL 391 (849)
Q Consensus 312 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~ 391 (849)
++..+..|..+++|++|+|++|++.+..+..|..+++|++|+|++|.+++..|..|.++++|++|+|++|++++..+..|
T Consensus 312 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 391 (455)
T 3v47_A 312 NKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIF 391 (455)
T ss_dssp CEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTT
T ss_pred cccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHh
Confidence 99889999999999999999999998888899999999999999999998889999999999999999999998777788
Q ss_pred cCCCCCcEEEccCccccccCc
Q 042123 392 GKLNPLTKLILRGNQITGRLP 412 (849)
Q Consensus 392 ~~l~~L~~L~L~~N~l~~~~p 412 (849)
..+++|++|+|++|++++..|
T Consensus 392 ~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 392 DRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp TTCTTCCEEECCSSCBCCCTT
T ss_pred ccCCcccEEEccCCCcccCCC
Confidence 999999999999999986655
No 39
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=2.6e-43 Score=370.96 Aligned_cols=240 Identities=21% Similarity=0.386 Sum_probs=177.6
Q ss_pred cCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHHHHH-----------hhceeecCC-----
Q 042123 588 NDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVEA-----------FYGFCSHAR----- 650 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~~-----------~~~~~~~~~----- 650 (849)
++|+..+.||+|+||+||+|+. .+|+.||||++.... .....+.+.+|+.. +++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~---~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~ 81 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN---RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKL 81 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS---SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-----
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC---CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccc
Confidence 4689999999999999999965 579999999986532 23334567777663 455554322
Q ss_pred -------eeEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEE
Q 042123 651 -------HSFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAH 723 (849)
Q Consensus 651 -------~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~k 723 (849)
..|+|||||++|+|.+++.........++..++.++.||+.||+|||++ +|+||||||+|||++.++.+|
T Consensus 82 ~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vK 158 (299)
T 4g31_A 82 QPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVK 158 (299)
T ss_dssp -----CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEE
T ss_pred cccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEE
Confidence 4689999999999999997665444567788999999999999999999 999999999999999999999
Q ss_pred EeeecCCcccCCCCC------------CeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccc
Q 042123 724 VADFGIAKSLKPDSS------------NWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISS 791 (849)
Q Consensus 724 l~DfG~a~~~~~~~~------------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~ 791 (849)
|+|||+|+....... .....+||+.|||||++.+..|+.++||||+||++|||++ ||....
T Consensus 159 l~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~---- 231 (299)
T 4g31_A 159 VGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM---- 231 (299)
T ss_dssp ECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH----
T ss_pred EccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc----
Confidence 999999987654321 1234579999999999999999999999999999999996 775221
Q ss_pred cccccccccccccCCCCCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 792 SSLNTDVALDQMLDPRLPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
..............+ ...........+++.+||++||++|||+.|+++|
T Consensus 232 ---~~~~~~~~~~~~~~p---~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 280 (299)
T 4g31_A 232 ---ERVRTLTDVRNLKFP---PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280 (299)
T ss_dssp ---HHHHHHHHHHTTCCC---HHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ---HHHHHHHHHhcCCCC---CCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 011112222222222 2223334456789999999999999999999885
No 40
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=2.7e-42 Score=401.11 Aligned_cols=450 Identities=17% Similarity=0.120 Sum_probs=350.0
Q ss_pred CCCCCCCEEeCcCCccccCCCccccCCCCCCEeeCCCCcCcccccccccccCCCCCccccCeEeccCCcccccCCccCCC
Q 042123 27 SSFPHLAYLDLTWNGFFGTIPPQISNLSNLRYLYLGSNQFSGNILAEVSSESSGGNLRYMSRLVINDNSLSGFIPPHIGN 106 (849)
Q Consensus 27 ~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 106 (849)
+.....+++|+++|+++++ |..+. ++|++|+|++|++++. ....|+++++|++|+|++|.|++..|.+|.+
T Consensus 28 ~~~~~~~~l~ls~~~L~~i-p~~~~--~~L~~L~Ls~N~i~~~------~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 98 (562)
T 3a79_B 28 FSNELESMVDYSNRNLTHV-PKDLP--PRTKALSLSQNSISEL------RMPDISFLSELRVLRLSHNRIRSLDFHVFLF 98 (562)
T ss_dssp -----CCEEECTTSCCCSC-CTTSC--TTCCEEECCSSCCCCC------CGGGTTTCTTCCEEECCSCCCCEECTTTTTT
T ss_pred cccCCCcEEEcCCCCCccC-CCCCC--CCcCEEECCCCCcccc------ChhhhccCCCccEEECCCCCCCcCCHHHhCC
Confidence 3344568999999999864 44443 8999999999999853 3356788999999999999999999999999
Q ss_pred CCCCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccc-cccccCCCCCCCEEEcCCCcccccCCcCCCCCCCC--C
Q 042123 107 LKFLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGS-ILSSLGKLKSLFDLQLNDNQLIGYIPRPFSNLTSV--S 183 (849)
Q Consensus 107 l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L--~ 183 (849)
+++|++|+|++|+|+. +|.. .+++|++|+|++|++++. .|..|+++++|++|+|++|++... .|..+++| +
T Consensus 99 l~~L~~L~Ls~N~l~~-lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~ 172 (562)
T 3a79_B 99 NQDLEYLDVSHNRLQN-ISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLS 172 (562)
T ss_dssp CTTCCEEECTTSCCCE-ECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEE
T ss_pred CCCCCEEECCCCcCCc-cCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceee
Confidence 9999999999999995 4444 899999999999999874 358999999999999999999864 56666666 9
Q ss_pred EEEccCCCC--cCcCcccccCCC--CCCEEeccCCcCccCCCc-CccCccccchhhhccccc-----cCCCCcchhh-hh
Q 042123 184 TLRLSRNDL--FGSIPDEIGKMR--SLSVLDLNQNQFKGVLPP-SISNLTNLKELALLYNHL-----SGSIPPSLGN-LI 252 (849)
Q Consensus 184 ~L~Ls~N~l--~~~~~~~~~~l~--~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~L~~N~l-----~~~~p~~~~~-~~ 252 (849)
+|+|++|++ ++..|..+..+. .| .+++++|.+.+..+. .+..+++|+.|++++|.. .+.++ .+.. ..
T Consensus 173 ~L~L~~n~l~~~~~~~~~l~~l~~~~l-~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~-~l~~l~~ 250 (562)
T 3a79_B 173 CILLDLVSYHIKGGETESLQIPNTTVL-HLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLS-ELTRGPT 250 (562)
T ss_dssp EEEEEESSCCCCSSSCCEEEECCEEEE-EEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHH-HHHSCSS
T ss_pred EEEeecccccccccCcccccccCcceE-EEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHH-HHhccCc
Confidence 999999999 888888888765 34 668899998865553 577899999999999852 11111 1111 23
Q ss_pred hhhhhccCcCCCCCC----CcccCCCCCcceeeecccccccccCCCC-----CCcccccEEEccCccccCchhhhhCC--
Q 042123 253 LRQLLLSGNHFTGYL----PYNICRGGALEIFTVSENHFQGTIPTSL-----RNCTSLIRVRLNGNNLTGNISEALGI-- 321 (849)
Q Consensus 253 L~~L~L~~n~i~~~~----~~~~~~~~~L~~L~l~~N~l~~~~~~~~-----~~l~~L~~L~L~~n~l~~~~~~~~~~-- 321 (849)
++.++++++.+.+.. +..+ ...+|+.|++++|.+++.+|..+ ..++.|+.++++.|.+ ..+...+..
T Consensus 251 L~~L~L~~~~l~~~~~~~~~~~~-~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~-~~p~~~~~~~~ 328 (562)
T 3a79_B 251 LLNVTLQHIETTWKCSVKLFQFF-WPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF-LFSKEALYSVF 328 (562)
T ss_dssp CEEEEEEEEEECHHHHHHHHHHH-TTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC-SSCHHHHHHHH
T ss_pred ceEEEecCCcCcHHHHHHHHHhh-hcccccEEEEeccEeeccccchhhhcccccchheehhhccccee-ecChhhhhhhh
Confidence 666666666654321 1111 23489999999999998889887 7788888888888877 233233322
Q ss_pred -CCCCCEEeccCccccCcccccCCCCCCCcEEeccCCccccCCCCCcccccccccccccccccccc--CchhhcCCCCCc
Q 042123 322 -YPNLTFIDLSRNNFYGEISSNWGKFPKLGTLNVSMNNITGGLPREIGNSSQLQAFDLSLNHIVGE--IPKELGKLNPLT 398 (849)
Q Consensus 322 -l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~N~i~~~--~~~~~~~l~~L~ 398 (849)
..+|+.|++++|.+.... ....+++|++|++++|.+++..|..+.++++|+.|+|++|++++. +|..|..+++|+
T Consensus 329 ~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~ 406 (562)
T 3a79_B 329 AEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLE 406 (562)
T ss_dssp HTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCC
T ss_pred ccCcceEEEccCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCC
Confidence 368999999999986432 126889999999999999998999999999999999999999973 357799999999
Q ss_pred EEEccCccccccCcc-cccccccccccccccCC---CCChhhhcccccceeccCCcccccCCCccccccCCCcEEeccCC
Q 042123 399 KLILRGNQITGRLPK-EIGSLTKLEYLDFSAIG---ELPSQICNMKSLEKLNLSHNNLSGSIPSCFEGMHGLSFIDMSYN 474 (849)
Q Consensus 399 ~L~L~~N~l~~~~p~-~~~~l~~L~~L~l~~l~---~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N 474 (849)
+|+|++|++++.+|. .+..+++|++|++++.. .+|..+. ++|+.|+|++|+|+ .+|..+..+++|+.|+|++|
T Consensus 407 ~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N 483 (562)
T 3a79_B 407 TLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASN 483 (562)
T ss_dssp EEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSS
T ss_pred EEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCC
Confidence 999999999984554 58899999999998743 3333332 69999999999999 56666669999999999999
Q ss_pred ccccCCCCC--cccccCcccccccCCCcc
Q 042123 475 ELQCPVPNS--TTFRGASVEALKGNKGLC 501 (849)
Q Consensus 475 ~l~~~~~~~--~~~~~~~~~~~~~~~~~c 501 (849)
+++. +|.. ..+.......+.+|+..|
T Consensus 484 ~l~~-l~~~~~~~l~~L~~L~l~~N~~~c 511 (562)
T 3a79_B 484 QLKS-VPDGVFDRLTSLQYIWLHDNPWDC 511 (562)
T ss_dssp CCCC-CCTTSTTTCTTCCCEECCSCCBCC
T ss_pred CCCC-CCHHHHhcCCCCCEEEecCCCcCC
Confidence 9995 4443 233344445566776655
No 41
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=1e-40 Score=394.93 Aligned_cols=436 Identities=22% Similarity=0.226 Sum_probs=346.4
Q ss_pred cEEEEecCCCceeeeeCCccCCCCCCCCEEeCcCCccccCCCccccCCCCCCEeeCCCCcCcccccccccccCCCCCccc
Q 042123 6 RVINISLPNIGVNGTLHDFSFSSFPHLAYLDLTWNGFFGTIPPQISNLSNLRYLYLGSNQFSGNILAEVSSESSGGNLRY 85 (849)
Q Consensus 6 ~~~~~~~~~~~~~~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~ 85 (849)
.++.|+|+.+.+.+. ...+|.++++|++|||++|+|+++.+.+|.++++|++|+|++|+|++ .....|.++++
T Consensus 53 ~~~~LdLs~N~i~~l-~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~------l~~~~f~~L~~ 125 (635)
T 4g8a_A 53 STKNLDLSFNPLRHL-GSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQS------LALGAFSGLSS 125 (635)
T ss_dssp TCCEEECTTSCCCEE-CTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCE------ECGGGGTTCTT
T ss_pred CCCEEEeeCCCCCCC-CHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCC------CCHHHhcCCCC
Confidence 578999999998765 44589999999999999999999999999999999999999999974 23456789999
Q ss_pred cCeEeccCCcccccCCccCCCCCCCCEEEccCCcccCC-CCCCCcCCCCCceeeccCcccccccccccCCCCCC----CE
Q 042123 86 MSRLVINDNSLSGFIPPHIGNLKFLSQLDLTNNKFSGP-IPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSL----FD 160 (849)
Q Consensus 86 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L----~~ 160 (849)
|++|+|++|.|+++.+..|+++++|++|+|++|+++++ .|..+..+++|++|+|++|+|++..+..|..+.++ ..
T Consensus 126 L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~ 205 (635)
T 4g8a_A 126 LQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLS 205 (635)
T ss_dssp CCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCE
T ss_pred CCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhh
Confidence 99999999999988888899999999999999999864 57788999999999999999998888887665544 46
Q ss_pred EEcCCCcccccCCcCCCCCCCCCEEEccCCCCcCc---------------------------------------------
Q 042123 161 LQLNDNQLIGYIPRPFSNLTSVSTLRLSRNDLFGS--------------------------------------------- 195 (849)
Q Consensus 161 L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~--------------------------------------------- 195 (849)
++++.|.+..+.+..+..+ .+..|++++|.....
T Consensus 206 ~~ls~n~l~~i~~~~~~~~-~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~ 284 (635)
T 4g8a_A 206 LDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIE 284 (635)
T ss_dssp EECTTCCCCEECTTTTTTC-EEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEE
T ss_pred hhcccCcccccCcccccch-hhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhh
Confidence 8888888887766554432 344455544422100
Q ss_pred -------------Cccc----------------------ccCCCCCCEEeccCCcCccCCCcCccCccccchhhhccccc
Q 042123 196 -------------IPDE----------------------IGKMRSLSVLDLNQNQFKGVLPPSISNLTNLKELALLYNHL 240 (849)
Q Consensus 196 -------------~~~~----------------------~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 240 (849)
.+.. +....+|+.|++.+|.+....+ ..+..|+.+++..|.+
T Consensus 285 ~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~---~~l~~L~~l~l~~n~~ 361 (635)
T 4g8a_A 285 EFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPT---LKLKSLKRLTFTSNKG 361 (635)
T ss_dssp EEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEECGGGGSCCCCSEEEEESCEESSCCC---CBCTTCCEEEEESCCS
T ss_pred hhhhhhhcccccchhhhhhhhcccccccccccccccccccccchhhhhhhcccccccCcCc---ccchhhhhcccccccC
Confidence 0011 2223344555555555443322 2234455555555554
Q ss_pred cCCCCcchhhhhhhhhhccCcCCCC--CCCcccCCCCCcceeeecccccccccCCCCCCcccccEEEccCccccCchh-h
Q 042123 241 SGSIPPSLGNLILRQLLLSGNHFTG--YLPYNICRGGALEIFTVSENHFQGTIPTSLRNCTSLIRVRLNGNNLTGNIS-E 317 (849)
Q Consensus 241 ~~~~p~~~~~~~L~~L~L~~n~i~~--~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~ 317 (849)
. ..+.......|+.+++++|.+.. ..+..+..+.+|+.++++.|.+.. .+..+..+++|+.+++..|+.....+ .
T Consensus 362 ~-~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~-~~~~~~~l~~L~~l~l~~~~~~~~~~~~ 439 (635)
T 4g8a_A 362 G-NAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFS 439 (635)
T ss_dssp C-CBCCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEE-ECSCCTTCTTCCEEECTTSEEESTTSSC
T ss_pred C-CCcccccccccccchhhccccccccccccchhhhhhhhhhhcccccccc-ccccccccccccchhhhhcccccccccc
Confidence 3 22222233358899999998863 456667778899999999999874 56678889999999999888765544 5
Q ss_pred hhCCCCCCCEEeccCccccCcccccCCCCCCCcEEeccCCcc-ccCCCCCccccccccccccccccccccCchhhcCCCC
Q 042123 318 ALGIYPNLTFIDLSRNNFYGEISSNWGKFPKLGTLNVSMNNI-TGGLPREIGNSSQLQAFDLSLNHIVGEIPKELGKLNP 396 (849)
Q Consensus 318 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i-~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~ 396 (849)
.+..+++++.++++.|.+.+..+..+..++.|+.|+|++|.+ .+..|..|..+++|++|+|++|++++..|..|.++++
T Consensus 440 ~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~ 519 (635)
T 4g8a_A 440 VFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSS 519 (635)
T ss_dssp TTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTT
T ss_pred ccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCC
Confidence 688899999999999999999999999999999999999975 4467889999999999999999999999999999999
Q ss_pred CcEEEccCccccccCccccccccccccccccc--CCCC-Chhhhcc-cccceeccCCccccc
Q 042123 397 LTKLILRGNQITGRLPKEIGSLTKLEYLDFSA--IGEL-PSQICNM-KSLEKLNLSHNNLSG 454 (849)
Q Consensus 397 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~--l~~l-p~~~~~l-~~L~~L~L~~N~l~~ 454 (849)
|++|+|++|+|++..|..|..+++|++||++. +..+ |..+..+ ++|+.|+|++|+++.
T Consensus 520 L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C 581 (635)
T 4g8a_A 520 LQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFAC 581 (635)
T ss_dssp CCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCC
T ss_pred CCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcc
Confidence 99999999999988899999999999999986 4444 5677777 689999999999984
No 42
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=2.5e-41 Score=365.87 Aligned_cols=186 Identities=26% Similarity=0.366 Sum_probs=153.2
Q ss_pred HHhcCCCcCceecCCccceEEEEEec----CCcEEEEEEecccCCCCchhhHHHHHHHH------------HHhhceeec
Q 042123 585 KATNDFDAKYCIGNGGHASVYRAELP----SGEVVAVKKFHSLLPCDQTVDQKEFLTEV------------EAFYGFCSH 648 (849)
Q Consensus 585 ~~~~~f~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~ei------------~~~~~~~~~ 648 (849)
...+.|++.+.||+|+||+||+|+.+ +++.||||++..... ...+.+|+ .++++++.+
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~------~~~~~~E~~~l~~~~~h~nIv~l~~~~~~ 91 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSH------PIRIAAELQCLTVAGGQDNVMGVKYCFRK 91 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSC------HHHHHHHHHHHHHTCSBTTBCCCSEEEEE
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccC------HHHHHHHHHHHHHhcCCCCCceEEEEEEE
Confidence 34578999999999999999999642 478899999865321 12233333 246778888
Q ss_pred CCeeEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCC-CcEEEeee
Q 042123 649 ARHSFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLE-YEAHVADF 727 (849)
Q Consensus 649 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~-~~~kl~Df 727 (849)
.++.|+||||+++|+|.+++. .+++.++..++.|++.||+|||++ +|+||||||+|||++.+ +.+||+||
T Consensus 92 ~~~~~lvmE~~~g~~L~~~~~------~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DF 162 (361)
T 4f9c_A 92 NDHVVIAMPYLEHESFLDILN------SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDF 162 (361)
T ss_dssp TTEEEEEEECCCCCCHHHHHT------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCC
T ss_pred CCEEEEEEeCCCcccHHHHHc------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcC
Confidence 899999999999999999983 389999999999999999999999 99999999999999887 89999999
Q ss_pred cCCcccCCCC----------------------------CCeeeccCCccccccccccCC-CCCccchHHHHHHHHHHHHh
Q 042123 728 GIAKSLKPDS----------------------------SNWTEFAGTCGYIAPELAYTM-KITEKCDVYSFGVLMWEVIK 778 (849)
Q Consensus 728 G~a~~~~~~~----------------------------~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~SlGvil~el~t 778 (849)
|+|+...... ......+||+.|+|||++.+. .|+.++||||+||++|||++
T Consensus 163 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~ 242 (361)
T 4f9c_A 163 GLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLS 242 (361)
T ss_dssp TTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHH
T ss_pred CCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHH
Confidence 9998654321 112345799999999998775 48999999999999999999
Q ss_pred CCCCCCc
Q 042123 779 GKHPRDF 785 (849)
Q Consensus 779 g~~Pf~~ 785 (849)
|+.||..
T Consensus 243 G~~Pf~~ 249 (361)
T 4f9c_A 243 GRYPFYK 249 (361)
T ss_dssp TCSSSSC
T ss_pred CCCCCCC
Confidence 9999953
No 43
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.5e-40 Score=361.69 Aligned_cols=250 Identities=22% Similarity=0.340 Sum_probs=183.7
Q ss_pred cCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHHHHH-----------hhceee------cC
Q 042123 588 NDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVEA-----------FYGFCS------HA 649 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~~-----------~~~~~~------~~ 649 (849)
++|++.+.||+|+||+||+|+. .+|+.||||++..... .....+.+.+|+.. +++++. +.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~--~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~ 131 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFD--VVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEF 131 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTS--SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECcccc--chHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccC
Confidence 5799999999999999999965 5799999999975432 22334556677653 344432 34
Q ss_pred CeeEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecC
Q 042123 650 RHSFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGI 729 (849)
Q Consensus 650 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~ 729 (849)
+..|+|||||+ |+|.+++... +.+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+
T Consensus 132 ~~~~ivmE~~~-g~L~~~i~~~---~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGl 204 (398)
T 4b99_A 132 KSVYVVLDLME-SDLHQIIHSS---QPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGM 204 (398)
T ss_dssp CCEEEEEECCS-EEHHHHHTSS---SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTT
T ss_pred CEEEEEEeCCC-CCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecce
Confidence 67899999996 6899998654 3599999999999999999999999 999999999999999999999999999
Q ss_pred CcccCCC----CCCeeeccCCccccccccccCC-CCCccchHHHHHHHHHHHHhCCCCCCccccccccc-------cc--
Q 042123 730 AKSLKPD----SSNWTEFAGTCGYIAPELAYTM-KITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSS-------LN-- 795 (849)
Q Consensus 730 a~~~~~~----~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~-------~~-- 795 (849)
|+.+... .......+||+.|+|||++.+. .++.++||||+||++|||++|+.||...+...... ..
T Consensus 205 a~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~ 284 (398)
T 4b99_A 205 ARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSP 284 (398)
T ss_dssp CBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCG
T ss_pred eeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCh
Confidence 9876432 2234567899999999998875 46899999999999999999999997533211000 00
Q ss_pred ------cccccccc---cCCCCCCCCh-hhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 796 ------TDVALDQM---LDPRLPAPSR-SAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 796 ------~~~~~~~~---~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
........ ..+..+.+.. ........+.+|+.+||+.||++|||++|+++|
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 285 AVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp GGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred HHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 00000000 0011111000 000112357899999999999999999999886
No 44
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=5.9e-40 Score=368.56 Aligned_cols=344 Identities=22% Similarity=0.268 Sum_probs=135.0
Q ss_pred EEEEecCCCceeeeeCCccCCCCCCCCEEeCcCCccccCCCccccCCCCC-------------CEeeCCCCcCccccccc
Q 042123 7 VINISLPNIGVNGTLHDFSFSSFPHLAYLDLTWNGFFGTIPPQISNLSNL-------------RYLYLGSNQFSGNILAE 73 (849)
Q Consensus 7 ~~~~~~~~~~~~~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L-------------~~L~L~~N~l~~~~~~~ 73 (849)
+..++++.+++ |.+++ ++..+++|++|++++|++.+..|..++++++| ++|++++|++++.+
T Consensus 13 L~~L~l~~n~l-~~iP~-~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~lp--- 87 (454)
T 1jl5_A 13 LQEPLRHSSNL-TEMPV-EAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSSLP--- 87 (454)
T ss_dssp -----------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSCCC---
T ss_pred chhhhcccCch-hhCCh-hHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCccccCC---
Confidence 34444444444 44443 34555555555555555544555555544432 44444444444210
Q ss_pred ccccCCCCCccccCeEeccCCcccccCCccCCCCCCCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccC
Q 042123 74 VSSESSGGNLRYMSRLVINDNSLSGFIPPHIGNLKFLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLG 153 (849)
Q Consensus 74 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 153 (849)
. -.++|+.|++++|.+++ +|.. +++|++|++++|+++++.. . .++|++|++++|++++ +| .|+
T Consensus 88 --~-----~~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~l~~-~---~~~L~~L~L~~n~l~~-lp-~~~ 150 (454)
T 1jl5_A 88 --E-----LPPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKALSD-L---PPLLEYLGVSNNQLEK-LP-ELQ 150 (454)
T ss_dssp --S-----CCTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSCCCS-C---CTTCCEEECCSSCCSS-CC-CCT
T ss_pred --C-----CcCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCcccC-C---CCCCCEEECcCCCCCC-Cc-ccC
Confidence 0 01344444444444443 2322 2344444444444443211 0 1344444444444443 22 344
Q ss_pred CCCCCCEEEcCCCcccccCCcCCCCCCCCCEEEccCCCCcCcCcccccCCCCCCEEeccCCcCccCCCcCccCccccchh
Q 042123 154 KLKSLFDLQLNDNQLIGYIPRPFSNLTSVSTLRLSRNDLFGSIPDEIGKMRSLSVLDLNQNQFKGVLPPSISNLTNLKEL 233 (849)
Q Consensus 154 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 233 (849)
++++|++|++++|+++++ |.. ..+|++|++++|++++ +| .+.++++|++|++++|++++ +|... ++|++|
T Consensus 151 ~l~~L~~L~l~~N~l~~l-p~~---~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~---~~L~~L 220 (454)
T 1jl5_A 151 NSSFLKIIDVDNNSLKKL-PDL---PPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP---LSLESI 220 (454)
T ss_dssp TCTTCCEEECCSSCCSCC-CCC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC---TTCCEE
T ss_pred CCCCCCEEECCCCcCccc-CCC---cccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc---CcccEE
Confidence 444444444444444442 111 1244444444444442 23 24444444444444444443 22211 244444
Q ss_pred hhccccccCCCCcchhhh-hhhhhhccCcCCCCCCCcccCCCCCcceeeecccccccccCCCCCCcccccEEEccCcccc
Q 042123 234 ALLYNHLSGSIPPSLGNL-ILRQLLLSGNHFTGYLPYNICRGGALEIFTVSENHFQGTIPTSLRNCTSLIRVRLNGNNLT 312 (849)
Q Consensus 234 ~L~~N~l~~~~p~~~~~~-~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~ 312 (849)
++++|.++ .+|. ++.+ .|++|++++|++++. |.. .++|+.|++++|++++ +|.. +++|+.|++++|+++
T Consensus 221 ~l~~n~l~-~lp~-~~~l~~L~~L~l~~N~l~~l-~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~ 290 (454)
T 1jl5_A 221 VAGNNILE-ELPE-LQNLPFLTTIYADNNLLKTL-PDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFS 290 (454)
T ss_dssp ECCSSCCS-SCCC-CTTCTTCCEEECCSSCCSSC-CSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS
T ss_pred ECcCCcCC-cccc-cCCCCCCCEEECCCCcCCcc-ccc---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccC
Confidence 44444444 3342 2222 244444444444432 111 1344444444444443 2222 134444444444444
Q ss_pred CchhhhhCCCCCCCEEeccCccccCcccccCCCC-CCCcEEeccCCccccCCCCCccccccccccccccccccccCchhh
Q 042123 313 GNISEALGIYPNLTFIDLSRNNFYGEISSNWGKF-PKLGTLNVSMNNITGGLPREIGNSSQLQAFDLSLNHIVGEIPKEL 391 (849)
Q Consensus 313 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l-~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~ 391 (849)
+... ..++|+.|++++|++.+. + .+ ++|++|++++|++++ +|.. +++|+.|++++|++++ +|.
T Consensus 291 ~l~~----~~~~L~~L~l~~N~l~~i-~----~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~~-lp~-- 354 (454)
T 1jl5_A 291 GLSE----LPPNLYYLNASSNEIRSL-C----DLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLAE-VPE-- 354 (454)
T ss_dssp EESC----CCTTCCEEECCSSCCSEE-C----CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC--
T ss_pred cccC----cCCcCCEEECcCCcCCcc-c----CCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCcccc-ccc--
Confidence 3210 113444444444444421 1 11 244444444444442 3322 2344444444444442 332
Q ss_pred cCCCCCcEEEccCccccc
Q 042123 392 GKLNPLTKLILRGNQITG 409 (849)
Q Consensus 392 ~~l~~L~~L~L~~N~l~~ 409 (849)
.+++|++|++++|++++
T Consensus 355 -~l~~L~~L~L~~N~l~~ 371 (454)
T 1jl5_A 355 -LPQNLKQLHVEYNPLRE 371 (454)
T ss_dssp -CCTTCCEEECCSSCCSS
T ss_pred -hhhhccEEECCCCCCCc
Confidence 23444444444444443
No 45
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=9.2e-40 Score=372.29 Aligned_cols=324 Identities=20% Similarity=0.215 Sum_probs=195.5
Q ss_pred eEeccCCcccccCCccCCCCCCCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEEcCCCc
Q 042123 88 RLVINDNSLSGFIPPHIGNLKFLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLNDNQ 167 (849)
Q Consensus 88 ~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 167 (849)
.++++++.++ .+|..+. +++++|+|++|+|+++.+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|+
T Consensus 15 ~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 91 (477)
T 2id5_A 15 AVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 91 (477)
T ss_dssp EEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCc
Confidence 3445555554 3344433 466777777777776666677777777777777777776666677777777777777777
Q ss_pred ccccCCcCCCCCCCCCEEEccCCCCcCcCcccccCCCCCCEEeccCCcCccCCCcCccCccccchhhhccccccCCCCcc
Q 042123 168 LIGYIPRPFSNLTSVSTLRLSRNDLFGSIPDEIGKMRSLSVLDLNQNQFKGVLPPSISNLTNLKELALLYNHLSGSIPPS 247 (849)
Q Consensus 168 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~ 247 (849)
+..+++..|.++++|++|+|++|++.+..+..|.++++|++|++++|.+..+.+..|.++++|++|+|++|.+++ +|
T Consensus 92 l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~-- 168 (477)
T 2id5_A 92 LKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTS-IP-- 168 (477)
T ss_dssp CCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSS-CC--
T ss_pred CCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcc-cC--
Confidence 777666667777777777777777766666667777777777777777766666666666666666666665542 11
Q ss_pred hhhhhhhhhhccCcCCCCCCCcccCCCCCcceeeecccccccccCCCCCCcccccEEEccCccccCchhhhhCCCCCCCE
Q 042123 248 LGNLILRQLLLSGNHFTGYLPYNICRGGALEIFTVSENHFQGTIPTSLRNCTSLIRVRLNGNNLTGNISEALGIYPNLTF 327 (849)
Q Consensus 248 ~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 327 (849)
+..+..+++|+.|++++|.+.+..+..|..+++|+.|++++|.
T Consensus 169 --------------------~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~----------------- 211 (477)
T 2id5_A 169 --------------------TEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWP----------------- 211 (477)
T ss_dssp --------------------HHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCT-----------------
T ss_pred --------------------hhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCc-----------------
Confidence 1122233344444444444444444444444445555554444
Q ss_pred EeccCccccCcccccCCCCCCCcEEeccCCccccCCCCCccccccccccccccccccccCchhhcCCCCCcEEEccCccc
Q 042123 328 IDLSRNNFYGEISSNWGKFPKLGTLNVSMNNITGGLPREIGNSSQLQAFDLSLNHIVGEIPKELGKLNPLTKLILRGNQI 407 (849)
Q Consensus 328 L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l 407 (849)
..+.++..+....+|+.|++++|.++...+..|..+++|+.|+|++|.+++..+..|..+++|++|+|++|++
T Consensus 212 -------~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l 284 (477)
T 2id5_A 212 -------YLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQL 284 (477)
T ss_dssp -------TCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCC
T ss_pred -------cccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCcc
Confidence 4333333333344555555555555533323455555566666666666555555566666666666666666
Q ss_pred cccCcccccccccccccccccCCCCChhhhcccccceeccCCcccccCCCccccccCCCcEEeccCCccccCCCC
Q 042123 408 TGRLPKEIGSLTKLEYLDFSAIGELPSQICNMKSLEKLNLSHNNLSGSIPSCFEGMHGLSFIDMSYNELQCPVPN 482 (849)
Q Consensus 408 ~~~~p~~~~~l~~L~~L~l~~l~~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~ 482 (849)
++..|..|. .+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|.|+|+.
T Consensus 285 ~~~~~~~~~---------------------~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~ 338 (477)
T 2id5_A 285 AVVEPYAFR---------------------GLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRL 338 (477)
T ss_dssp SEECTTTBT---------------------TCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGGG
T ss_pred ceECHHHhc---------------------CcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCccch
Confidence 654444333 334455666666777766666777777777777777777777654
No 46
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=2.3e-40 Score=376.05 Aligned_cols=242 Identities=18% Similarity=0.262 Sum_probs=186.9
Q ss_pred cCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCC--Cchhh---HHHHHH--------HHHHhhceeecCCeeE
Q 042123 588 NDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPC--DQTVD---QKEFLT--------EVEAFYGFCSHARHSF 653 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~---~~~~~~--------ei~~~~~~~~~~~~~~ 653 (849)
++|++.++||+|+||+||+|+. .+|+.||||++.+.... ..... .+..++ .|..+++++.+.+..|
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly 268 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 268 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence 6799999999999999999965 57999999998643110 01110 111111 1334677888899999
Q ss_pred EEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCccc
Q 042123 654 LLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSL 733 (849)
Q Consensus 654 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~ 733 (849)
+|||||+||+|.+++.+. ..+++.++..++.||+.||+|||++ +|+||||||+|||++.+|.+||+|||+|+.+
T Consensus 269 lVmEy~~GGdL~~~l~~~---~~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~~~ 342 (689)
T 3v5w_A 269 FILDLMNGGDLHYHLSQH---GVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDF 342 (689)
T ss_dssp EEECCCCSCBHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceeeec
Confidence 999999999999999653 3599999999999999999999999 9999999999999999999999999999877
Q ss_pred CCCCCCeeeccCCccccccccccC-CCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCC
Q 042123 734 KPDSSNWTEFAGTCGYIAPELAYT-MKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPAPS 812 (849)
Q Consensus 734 ~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (849)
... .....+||+.|||||++.+ ..|+.++||||+||++|||++|+.||....... ...............+.
T Consensus 343 ~~~--~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~-----~~~i~~~i~~~~~~~p~ 415 (689)
T 3v5w_A 343 SKK--KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD-----KHEIDRMTLTMAVELPD 415 (689)
T ss_dssp SSC--CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCC-----HHHHHHHHHHCCCCCCT
T ss_pred CCC--CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-----HHHHHHhhcCCCCCCCc
Confidence 543 2345789999999999964 579999999999999999999999997432111 11112222222222222
Q ss_pred hhhHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHhh
Q 042123 813 RSAQEKLISIMEVAFSCFNESPESRPT-----MKIISQQ 846 (849)
Q Consensus 813 ~~~~~~~~~l~~li~~cl~~dP~~RPt-----~~eil~~ 846 (849)
.. ...+.+++.+||++||++|++ ++||++|
T Consensus 416 ~~----S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~H 450 (689)
T 3v5w_A 416 SF----SPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES 450 (689)
T ss_dssp TS----CHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTS
T ss_pred cC----CHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcC
Confidence 22 234789999999999999998 6888775
No 47
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=4.4e-39 Score=361.53 Aligned_cols=387 Identities=24% Similarity=0.296 Sum_probs=242.9
Q ss_pred CCCCCEEeCcCCccccCCCccccCCCCCCEeeCCCCcCcccccccccccCCCCCcccc-------------CeEeccCCc
Q 042123 29 FPHLAYLDLTWNGFFGTIPPQISNLSNLRYLYLGSNQFSGNILAEVSSESSGGNLRYM-------------SRLVINDNS 95 (849)
Q Consensus 29 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L-------------~~L~l~~n~ 95 (849)
.++|++|++++|++ +.+|.+|+++++|++|+|++|++++..+. .++.+++| ++|++++|.
T Consensus 10 ~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~------~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~ 82 (454)
T 1jl5_A 10 NTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPP------GNGEQREMAVSRLRDCLDRQAHELELNNLG 82 (454)
T ss_dssp -------------------------CCHHHHHHHHHHHHHTSCT------TSCCCHHHHHHHHHHHHHHTCSEEECTTSC
T ss_pred cccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCc------ccccchhcchhhhhhhhccCCCEEEecCCc
Confidence 57899999999999 78899999999999999999999875544 34667765 999999999
Q ss_pred ccccCCccCCCCCCCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEEcCCCcccccCCcC
Q 042123 96 LSGFIPPHIGNLKFLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLNDNQLIGYIPRP 175 (849)
Q Consensus 96 l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 175 (849)
+++. |.. .++|++|++++|++++ +|.. .++|++|++++|++++. +.. .++|++|++++|+++++ | .
T Consensus 83 l~~l-p~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~l-~~~---~~~L~~L~L~~n~l~~l-p-~ 148 (454)
T 1jl5_A 83 LSSL-PEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKAL-SDL---PPLLEYLGVSNNQLEKL-P-E 148 (454)
T ss_dssp CSCC-CSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSCC-CSC---CTTCCEEECCSSCCSSC-C-C
T ss_pred cccC-CCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCcc-cCC---CCCCCEEECcCCCCCCC-c-c
Confidence 9864 432 3789999999999997 5543 47899999999999853 221 26899999999999985 4 5
Q ss_pred CCCCCCCCEEEccCCCCcCcCcccccCCCCCCEEeccCCcCccCCCcCccCccccchhhhccccccCCCCcchhhhhhhh
Q 042123 176 FSNLTSVSTLRLSRNDLFGSIPDEIGKMRSLSVLDLNQNQFKGVLPPSISNLTNLKELALLYNHLSGSIPPSLGNLILRQ 255 (849)
Q Consensus 176 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~ 255 (849)
|.++++|++|++++|++++ +|..+ .+|++|++++|++++ +| .+.++++|++|++++|.+++ +|... ..|++
T Consensus 149 ~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~--~~L~~ 219 (454)
T 1jl5_A 149 LQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP--LSLES 219 (454)
T ss_dssp CTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC--TTCCE
T ss_pred cCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc--CcccE
Confidence 9999999999999999984 56543 589999999999996 45 69999999999999999984 55433 25788
Q ss_pred hhccCcCCCCCCCcccCCCCCcceeeecccccccccCCCCCCcccccEEEccCccccCchhhhhCCCCCCCEEeccCccc
Q 042123 256 LLLSGNHFTGYLPYNICRGGALEIFTVSENHFQGTIPTSLRNCTSLIRVRLNGNNLTGNISEALGIYPNLTFIDLSRNNF 335 (849)
Q Consensus 256 L~L~~n~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l 335 (849)
|++++|+++ .+| .+..+++|+.|++++|++++ +|.. +++|+.|++++|++++.+ . ..++|+.|++++|++
T Consensus 220 L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~l~-~---~~~~L~~L~ls~N~l 289 (454)
T 1jl5_A 220 IVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTDLP-E---LPQSLTFLDVSENIF 289 (454)
T ss_dssp EECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSCCC-C---CCTTCCEEECCSSCC
T ss_pred EECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccccC-c---ccCcCCEEECcCCcc
Confidence 888888888 445 37788888888888888875 3432 367888888888887633 2 236788888888888
Q ss_pred cCcccccCCCCCCCcEEeccCCccccCCCCCccccccccccccccccccccCchhhcCCCCCcEEEccCccccccCcccc
Q 042123 336 YGEISSNWGKFPKLGTLNVSMNNITGGLPREIGNSSQLQAFDLSLNHIVGEIPKELGKLNPLTKLILRGNQITGRLPKEI 415 (849)
Q Consensus 336 ~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~ 415 (849)
++. +.. .++|+.|++++|.+++ ++.. .++|+.|++++|++++ +|.. +++|+.|++++|+++ .+|.
T Consensus 290 ~~l-~~~---~~~L~~L~l~~N~l~~-i~~~---~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~-~lp~-- 354 (454)
T 1jl5_A 290 SGL-SEL---PPNLYYLNASSNEIRS-LCDL---PPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLA-EVPE-- 354 (454)
T ss_dssp SEE-SCC---CTTCCEEECCSSCCSE-ECCC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-CCCC--
T ss_pred Ccc-cCc---CCcCCEEECcCCcCCc-ccCC---cCcCCEEECCCCcccc-cccc---CCcCCEEECCCCccc-cccc--
Confidence 752 211 2578888888888874 2211 1477888888888875 4443 577888888888877 3444
Q ss_pred ccccccccccccc--CC---CCChhhhcccccceeccCCcccccCCCccccccCCCcEEeccCCcccc--CCCC
Q 042123 416 GSLTKLEYLDFSA--IG---ELPSQICNMKSLEKLNLSHNNLSGSIPSCFEGMHGLSFIDMSYNELQC--PVPN 482 (849)
Q Consensus 416 ~~l~~L~~L~l~~--l~---~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~--~~~~ 482 (849)
.+++|++|+++. +. .+|..+..+ +.|++.+.+|.. +++|+.|++++|++++ .+|.
T Consensus 355 -~l~~L~~L~L~~N~l~~l~~ip~~l~~L--------~~n~~~~~i~~~---~~~L~~L~ls~N~l~~~~~iP~ 416 (454)
T 1jl5_A 355 -LPQNLKQLHVEYNPLREFPDIPESVEDL--------RMNSHLAEVPEL---PQNLKQLHVETNPLREFPDIPE 416 (454)
T ss_dssp -CCTTCCEEECCSSCCSSCCCCCTTCCEE--------ECCC---------------------------------
T ss_pred -hhhhccEEECCCCCCCcCCCChHHHHhh--------hhcccccccccc---cCcCCEEECCCCcCCccccchh
Confidence 345555555543 11 233333332 112222222221 2667777777777776 4443
No 48
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=1.3e-39 Score=374.19 Aligned_cols=241 Identities=19% Similarity=0.301 Sum_probs=194.2
Q ss_pred cCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeEEE
Q 042123 588 NDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSFLL 655 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~lV 655 (849)
++|++.+.||+|+||+||+|+. .+|+.||||++.... ......+.+|+. ++++++.+....|+|
T Consensus 157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~----~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv 232 (573)
T 3uto_A 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH----ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMI 232 (573)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS----HHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccc----hhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEE
Confidence 6899999999999999999955 579999999986532 223344555644 477888899999999
Q ss_pred EEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCC--CcEEEeeecCCccc
Q 042123 656 YEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLE--YEAHVADFGIAKSL 733 (849)
Q Consensus 656 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~--~~~kl~DfG~a~~~ 733 (849)
||||++|+|.+++.... ..+++.++..++.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||+|+.+
T Consensus 233 ~E~~~gg~L~~~i~~~~--~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~ 307 (573)
T 3uto_A 233 YEFMSGGELFEKVADEH--NKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL 307 (573)
T ss_dssp EECCCCCBHHHHHTCTT--SCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEEC
T ss_pred EeecCCCcHHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEc
Confidence 99999999999986433 3589999999999999999999999 99999999999999865 89999999999987
Q ss_pred CCCCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCh
Q 042123 734 KPDSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPAPSR 813 (849)
Q Consensus 734 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 813 (849)
... ......+||+.|||||++.+..|+.++||||+||++|||++|+.||..... ......+.......+..
T Consensus 308 ~~~-~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~--------~~~~~~i~~~~~~~~~~ 378 (573)
T 3uto_A 308 DPK-QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND--------DETLRNVKSCDWNMDDS 378 (573)
T ss_dssp CTT-SEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH--------HHHHHHHHTTCCCCCSG
T ss_pred cCC-CceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--------HHHHHHHHhCCCCCCcc
Confidence 643 344567899999999999999999999999999999999999999974332 12222222222222222
Q ss_pred hhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 814 SAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 814 ~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
........+.+|+.+||+.||++|||+.|+++|
T Consensus 379 ~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 379 AFSGISEDGKDFIRKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp GGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred cccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 222233457899999999999999999999986
No 49
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=2e-38 Score=359.52 Aligned_cols=350 Identities=28% Similarity=0.363 Sum_probs=290.3
Q ss_pred CCCCCCCEEeCcCCccccCCCccccCCCCCCEeeCCCCcCcccccccccccCCCCCccccCeEeccCCcccccCCccCCC
Q 042123 27 SSFPHLAYLDLTWNGFFGTIPPQISNLSNLRYLYLGSNQFSGNILAEVSSESSGGNLRYMSRLVINDNSLSGFIPPHIGN 106 (849)
Q Consensus 27 ~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 106 (849)
..+++++.|++++|++..+. .+..+++|++|+|++|++++.. .+.++++|++|++++|.+.+..+ +.+
T Consensus 43 ~~l~~l~~L~l~~~~i~~l~--~~~~l~~L~~L~Ls~n~l~~~~--------~~~~l~~L~~L~l~~n~l~~~~~--~~~ 110 (466)
T 1o6v_A 43 TDLDQVTTLQADRLGIKSID--GVEYLNNLTQINFSNNQLTDIT--------PLKNLTKLVDILMNNNQIADITP--LAN 110 (466)
T ss_dssp HHHHTCCEEECCSSCCCCCT--TGGGCTTCCEEECCSSCCCCCG--------GGTTCTTCCEEECCSSCCCCCGG--GTT
T ss_pred hHhccccEEecCCCCCccCc--chhhhcCCCEEECCCCccCCch--------hhhccccCCEEECCCCccccChh--hcC
Confidence 44678999999999997643 3889999999999999987432 16789999999999999986654 899
Q ss_pred CCCCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEEcCCCcccccCCcCCCCCCCCCEEE
Q 042123 107 LKFLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLNDNQLIGYIPRPFSNLTSVSTLR 186 (849)
Q Consensus 107 l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 186 (849)
+++|++|++++|+++++.+ |.++++|++|++++|.+++. ..+.++++|+.|+++ |.+.++. .+.++++|++|+
T Consensus 111 l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~ 183 (466)
T 1o6v_A 111 LTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDI--SALSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLD 183 (466)
T ss_dssp CTTCCEEECCSSCCCCCGG--GTTCTTCSEEEEEEEEECCC--GGGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEE
T ss_pred CCCCCEEECCCCCCCCChH--HcCCCCCCEEECCCCccCCC--hhhccCCcccEeecC-CcccCch--hhccCCCCCEEE
Confidence 9999999999999997644 89999999999999999853 358999999999997 5555543 488999999999
Q ss_pred ccCCCCcCcCcccccCCCCCCEEeccCCcCccCCCcCccCccccchhhhccccccCCCCcchhhh-hhhhhhccCcCCCC
Q 042123 187 LSRNDLFGSIPDEIGKMRSLSVLDLNQNQFKGVLPPSISNLTNLKELALLYNHLSGSIPPSLGNL-ILRQLLLSGNHFTG 265 (849)
Q Consensus 187 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~-~L~~L~L~~n~i~~ 265 (849)
+++|++... ..+..+++|++|++++|.+.+..| ++.+++|++|++++|.+++ ++ .+..+ .|+.|++++|.+++
T Consensus 184 l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~l~~n~l~~ 257 (466)
T 1o6v_A 184 ISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD-IG-TLASLTNLTDLDLANNQISN 257 (466)
T ss_dssp CCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-CG-GGGGCTTCSEEECCSSCCCC
T ss_pred CcCCcCCCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCccc-ch-hhhcCCCCCEEECCCCcccc
Confidence 999998743 348889999999999999986644 7889999999999999874 43 33333 48889999998887
Q ss_pred CCCcccCCCCCcceeeecccccccccCCCCCCcccccEEEccCccccCchhhhhCCCCCCCEEeccCccccCcccccCCC
Q 042123 266 YLPYNICRGGALEIFTVSENHFQGTIPTSLRNCTSLIRVRLNGNNLTGNISEALGIYPNLTFIDLSRNNFYGEISSNWGK 345 (849)
Q Consensus 266 ~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 345 (849)
..+ +..+++|+.|++++|.+++..+ +..+++|+.|++++|++++..+ +..+++|+.|+|++|++.+..+ +..
T Consensus 258 ~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~ 329 (466)
T 1o6v_A 258 LAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSS 329 (466)
T ss_dssp CGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGG
T ss_pred chh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hcc
Confidence 655 7888899999999999886555 7888999999999999987665 7788999999999999987665 678
Q ss_pred CCCCcEEeccCCccccCCCCCccccccccccccccccccccCchhhcCCCCCcEEEccCccccccCccc
Q 042123 346 FPKLGTLNVSMNNITGGLPREIGNSSQLQAFDLSLNHIVGEIPKELGKLNPLTKLILRGNQITGRLPKE 414 (849)
Q Consensus 346 l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~ 414 (849)
+++|+.|++++|.+++. ..+..+++|+.|++++|++++..| +..+++|+.|++++|++++ .|..
T Consensus 330 l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~-~p~~ 393 (466)
T 1o6v_A 330 LTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTN-APVN 393 (466)
T ss_dssp CTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEEC-CCBC
T ss_pred CccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCcccC-Cchh
Confidence 88999999999998854 468888999999999999987776 8889999999999999885 3443
No 50
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=4.2e-38 Score=356.87 Aligned_cols=348 Identities=22% Similarity=0.344 Sum_probs=234.3
Q ss_pred cCCCCCCEeeCCCCcCcccccccccccCCCCCccccCeEeccCCcccccCCccCCCCCCCCEEEccCCcccCCCCCCCcC
Q 042123 51 SNLSNLRYLYLGSNQFSGNILAEVSSESSGGNLRYMSRLVINDNSLSGFIPPHIGNLKFLSQLDLTNNKFSGPIPLSFDN 130 (849)
Q Consensus 51 ~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~ 130 (849)
..+++|+.|++++|.++. + ..+..+++|++|+|++|.+++..+ +.++++|++|++++|++++..+ |.+
T Consensus 43 ~~l~~l~~L~l~~~~i~~-----l---~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~ 110 (466)
T 1o6v_A 43 TDLDQVTTLQADRLGIKS-----I---DGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LAN 110 (466)
T ss_dssp HHHHTCCEEECCSSCCCC-----C---TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTT
T ss_pred hHhccccEEecCCCCCcc-----C---cchhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcC
Confidence 345677777777777652 1 124556777777777777765433 6777777777777777775544 677
Q ss_pred CCCCceeeccCcccccccccccCCCCCCCEEEcCCCcccccCCcCCCCCCCCCEEEccCCCCcCcCcccccCCCCCCEEe
Q 042123 131 LSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLNDNQLIGYIPRPFSNLTSVSTLRLSRNDLFGSIPDEIGKMRSLSVLD 210 (849)
Q Consensus 131 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 210 (849)
+++|++|++++|.+++..+ +.++++|++|++++|.+.++. .+..+++|++|+++ |.+.+. + .+.++++|++|+
T Consensus 111 l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~l~-~~~~~~-~-~~~~l~~L~~L~ 183 (466)
T 1o6v_A 111 LTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDIS--ALSGLTSLQQLSFG-NQVTDL-K-PLANLTTLERLD 183 (466)
T ss_dssp CTTCCEEECCSSCCCCCGG--GTTCTTCSEEEEEEEEECCCG--GGTTCTTCSEEEEE-ESCCCC-G-GGTTCTTCCEEE
T ss_pred CCCCCEEECCCCCCCCChH--HcCCCCCCEEECCCCccCCCh--hhccCCcccEeecC-CcccCc-h-hhccCCCCCEEE
Confidence 7777777777777765432 667777777777777766542 46677777777775 344422 2 266677777777
Q ss_pred ccCCcCccCCCcCccCccccchhhhccccccCCCCcchhhhhhhhhhccCcCCCCCCCcccCCCCCcceeeecccccccc
Q 042123 211 LNQNQFKGVLPPSISNLTNLKELALLYNHLSGSIPPSLGNLILRQLLLSGNHFTGYLPYNICRGGALEIFTVSENHFQGT 290 (849)
Q Consensus 211 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~N~l~~~ 290 (849)
+++|.++.. ..+..+++|++|++++|.+.+.. + +..+++|+.|++++|++++.
T Consensus 184 l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~-----------------------~--~~~l~~L~~L~l~~n~l~~~ 236 (466)
T 1o6v_A 184 ISSNKVSDI--SVLAKLTNLESLIATNNQISDIT-----------------------P--LGILTNLDELSLNGNQLKDI 236 (466)
T ss_dssp CCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCG-----------------------G--GGGCTTCCEEECCSSCCCCC
T ss_pred CcCCcCCCC--hhhccCCCCCEEEecCCcccccc-----------------------c--ccccCCCCEEECCCCCcccc
Confidence 777776643 33566666666666666655322 1 33345666666666666643
Q ss_pred cCCCCCCcccccEEEccCccccCchhhhhCCCCCCCEEeccCccccCcccccCCCCCCCcEEeccCCccccCCCCCcccc
Q 042123 291 IPTSLRNCTSLIRVRLNGNNLTGNISEALGIYPNLTFIDLSRNNFYGEISSNWGKFPKLGTLNVSMNNITGGLPREIGNS 370 (849)
Q Consensus 291 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l 370 (849)
..+..+++|+.|++++|.+++..+ +..+++|+.|++++|++.+..+ +..+++|+.|++++|.+++..+ +..+
T Consensus 237 --~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l 308 (466)
T 1o6v_A 237 --GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNL 308 (466)
T ss_dssp --GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGC
T ss_pred --hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCC
Confidence 246667777777777777776554 6677777777777777775444 6677777777777777775433 6677
Q ss_pred ccccccccccccccccCchhhcCCCCCcEEEccCccccccCcccccccccccccccccCCCCChhhhcccccceeccCCc
Q 042123 371 SQLQAFDLSLNHIVGEIPKELGKLNPLTKLILRGNQITGRLPKEIGSLTKLEYLDFSAIGELPSQICNMKSLEKLNLSHN 450 (849)
Q Consensus 371 ~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~l~~lp~~~~~l~~L~~L~L~~N 450 (849)
++|+.|+|++|++++..| +..+++|++|++++|++++. ..+.++++|+.|++++|
T Consensus 309 ~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-----------------------~~l~~l~~L~~L~l~~n 363 (466)
T 1o6v_A 309 KNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV-----------------------SSLANLTNINWLSAGHN 363 (466)
T ss_dssp TTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC-----------------------GGGTTCTTCCEEECCSS
T ss_pred CCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc-----------------------hhhccCCCCCEEeCCCC
Confidence 777777777777776554 66777777777777777632 23456678889999999
Q ss_pred ccccCCCccccccCCCcEEeccCCccccC
Q 042123 451 NLSGSIPSCFEGMHGLSFIDMSYNELQCP 479 (849)
Q Consensus 451 ~l~~~~p~~~~~l~~L~~l~l~~N~l~~~ 479 (849)
++++..| +..+++|+.|++++|+|++.
T Consensus 364 ~l~~~~~--~~~l~~L~~L~l~~n~~~~~ 390 (466)
T 1o6v_A 364 QISDLTP--LANLTRITQLGLNDQAWTNA 390 (466)
T ss_dssp CCCBCGG--GTTCTTCCEEECCCEEEECC
T ss_pred ccCccch--hhcCCCCCEEeccCCcccCC
Confidence 9998877 88999999999999999984
No 51
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=1.6e-38 Score=343.14 Aligned_cols=268 Identities=34% Similarity=0.597 Sum_probs=210.5
Q ss_pred ccccHHHHHHHhcCCCcCceecCCccceEEEEEecCCcEEEEEEecccCCCCchhhHHHHHHHHH-----------Hhhc
Q 042123 576 GKILYDEIVKATNDFDAKYCIGNGGHASVYRAELPSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYG 644 (849)
Q Consensus 576 ~~~~~~~~~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~ 644 (849)
..+++.++..+.++|+..+.||+|+||.||+|+..+++.||||++........ ...+.+|+. .+++
T Consensus 18 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~---~~~~~~e~~~l~~l~h~~iv~~~~ 94 (326)
T 3uim_A 18 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGG---ELQFQTEVEMISMAVHRNLLRLRG 94 (326)
T ss_dssp EECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----C---CCHHHHHHHGGGTCCCTTBCCCCE
T ss_pred ceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchH---HHHHHHHHHHHHhccCCCccceEE
Confidence 35678899999999999999999999999999888899999999875432211 113445543 4778
Q ss_pred eeecCCeeEEEEEeccCCChhhhhcccc-cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEE
Q 042123 645 FCSHARHSFLLYEFLERGSLAAILNTDA-AAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAH 723 (849)
Q Consensus 645 ~~~~~~~~~lV~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~k 723 (849)
++......++||||+++|+|.+++.... ....+++.++..++.|++.||+|||+.+.++|+||||||+||+++.++.+|
T Consensus 95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~k 174 (326)
T 3uim_A 95 FCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV 174 (326)
T ss_dssp EECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEE
T ss_pred EEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEE
Confidence 8888889999999999999999997643 234589999999999999999999998666899999999999999999999
Q ss_pred EeeecCCcccCCCCCC-eeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCcccccccc---------c
Q 042123 724 VADFGIAKSLKPDSSN-WTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSS---------S 793 (849)
Q Consensus 724 l~DfG~a~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~---------~ 793 (849)
|+|||+++........ .....||+.|+|||.+.+..++.++||||+|+++|||++|+.||+........ .
T Consensus 175 l~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 254 (326)
T 3uim_A 175 VGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 254 (326)
T ss_dssp ECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTT
T ss_pred eccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHH
Confidence 9999999876543332 33456899999999998888999999999999999999999999632211110 0
Q ss_pred cccccccccccCCCCCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 794 LNTDVALDQMLDPRLPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
...........+..... ....+....+.+++.+||+.||++|||++||+++|+
T Consensus 255 ~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~ 307 (326)
T 3uim_A 255 LLKEKKLEALVDVDLQG--NYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307 (326)
T ss_dssp TTSSCCSTTSSCTTCTT--SCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHH
T ss_pred HhhchhhhhhcChhhcc--ccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhc
Confidence 11112222333333322 234556677999999999999999999999999985
No 52
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=9.6e-38 Score=350.92 Aligned_cols=356 Identities=18% Similarity=0.175 Sum_probs=240.3
Q ss_pred cCCCCCCCCEEeCcCCccccCCCccccCCCCCCEeeCCCCcCcccccccccccCCCCCccccCeEeccCCcccccCCccC
Q 042123 25 SFSSFPHLAYLDLTWNGFFGTIPPQISNLSNLRYLYLGSNQFSGNILAEVSSESSGGNLRYMSRLVINDNSLSGFIPPHI 104 (849)
Q Consensus 25 ~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 104 (849)
++..+++|++|+|++|+++++ | .|+.+++|++|+|++|++++. .++.+++|++|++++|.+++. + +
T Consensus 37 ~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~---------~~~~l~~L~~L~Ls~N~l~~~-~--~ 102 (457)
T 3bz5_A 37 SEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL---------DLSQNTNLTYLACDSNKLTNL-D--V 102 (457)
T ss_dssp EHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC---------CCTTCTTCSEEECCSSCCSCC-C--C
T ss_pred ChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE---------ccccCCCCCEEECcCCCCcee-e--c
Confidence 577789999999999999876 3 689999999999999998752 267889999999999999865 3 8
Q ss_pred CCCCCCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEEcCCCcccccCCcCCCCCCCCCE
Q 042123 105 GNLKFLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLNDNQLIGYIPRPFSNLTSVST 184 (849)
Q Consensus 105 ~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 184 (849)
+++++|++|++++|+++++ | +..+++|++|++++|++++. .++.+++|++|++++|+..+.. .+..+++|++
T Consensus 103 ~~l~~L~~L~L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~ 174 (457)
T 3bz5_A 103 TPLTKLTYLNCDTNKLTKL-D--VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKL--DVTPQTQLTT 174 (457)
T ss_dssp TTCTTCCEEECCSSCCSCC-C--CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCC--CCTTCTTCCE
T ss_pred CCCCcCCEEECCCCcCCee-c--CCCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCccccc--ccccCCcCCE
Confidence 8899999999999999864 3 88889999999999999864 3788899999999999543322 5788899999
Q ss_pred EEccCCCCcCcCcccccCCCCCCEEeccCCcCccCCCcCccCccccchhhhccccccCCCCcchhhh-hhhhhhccCcCC
Q 042123 185 LRLSRNDLFGSIPDEIGKMRSLSVLDLNQNQFKGVLPPSISNLTNLKELALLYNHLSGSIPPSLGNL-ILRQLLLSGNHF 263 (849)
Q Consensus 185 L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~-~L~~L~L~~n~i 263 (849)
|++++|++++ +| +..+++|+.|++++|++++. .+..+++|++|++++|++++ +| +... .|+.|++++|++
T Consensus 175 L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l 245 (457)
T 3bz5_A 175 LDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPL 245 (457)
T ss_dssp EECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCC
T ss_pred EECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcC
Confidence 9999999885 44 78888999999999998865 37888888888888888874 44 2222 255555555555
Q ss_pred CCCCCcccCCCCCcceeeecccccccccCCCCCCcccccEEEccCccccCchhhhhCCCCCCCEEeccCccccCcccccC
Q 042123 264 TGYLPYNICRGGALEIFTVSENHFQGTIPTSLRNCTSLIRVRLNGNNLTGNISEALGIYPNLTFIDLSRNNFYGEISSNW 343 (849)
Q Consensus 264 ~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 343 (849)
++.. +..+++|+.|+++.| +|+.|++++|.+.+..| ++.+++|+.|+|++|...+.+|.
T Consensus 246 ~~~~---~~~l~~L~~L~l~~n--------------~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~-- 304 (457)
T 3bz5_A 246 TELD---VSTLSKLTTLHCIQT--------------DLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDC-- 304 (457)
T ss_dssp SCCC---CTTCTTCCEEECTTC--------------CCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEEC--
T ss_pred CCcC---HHHCCCCCEEeccCC--------------CCCEEECCCCccCCccc--ccccccCCEEECCCCcccceecc--
Confidence 5432 223334444444333 23334445554443333 33445555555555554444432
Q ss_pred CCCCCCcEEeccCCccccCCCCCccccccccccccccccccccCchhhcCCCCCcEEEccCccccccCcccccccccccc
Q 042123 344 GKFPKLGTLNVSMNNITGGLPREIGNSSQLQAFDLSLNHIVGEIPKELGKLNPLTKLILRGNQITGRLPKEIGSLTKLEY 423 (849)
Q Consensus 344 ~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 423 (849)
..++|+.|++++| ++|+.|++++|++++. + ++.+++|+.|++++|++++
T Consensus 305 -~~~~L~~L~l~~~-------------~~L~~L~L~~N~l~~l-~--l~~l~~L~~L~l~~N~l~~-------------- 353 (457)
T 3bz5_A 305 -QAAGITELDLSQN-------------PKLVYLYLNNTELTEL-D--VSHNTKLKSLSCVNAHIQD-------------- 353 (457)
T ss_dssp -TTCCCSCCCCTTC-------------TTCCEEECTTCCCSCC-C--CTTCTTCSEEECCSSCCCB--------------
T ss_pred -CCCcceEechhhc-------------ccCCEEECCCCccccc-c--cccCCcCcEEECCCCCCCC--------------
Confidence 2233333333333 3556666666666543 2 5556666666666666553
Q ss_pred cccccCCCCChhhhcccccceeccCCcccccCCCccccccCCCcEEeccCCccccCCCCC
Q 042123 424 LDFSAIGELPSQICNMKSLEKLNLSHNNLSGSIPSCFEGMHGLSFIDMSYNELQCPVPNS 483 (849)
Q Consensus 424 L~l~~l~~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~ 483 (849)
++.|..|++++|.++|. ..+..|..+++++|.++|.+|..
T Consensus 354 ---------------l~~L~~L~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g~ip~~ 393 (457)
T 3bz5_A 354 ---------------FSSVGKIPALNNNFEAE-----GQTITMPKETLTNNSLTIAVSPD 393 (457)
T ss_dssp ---------------CTTGGGSSGGGTSEEEE-----EEEEECCCBCCBTTBEEEECCTT
T ss_pred ---------------ccccccccccCCcEEec-----ceeeecCccccccCcEEEEcChh
Confidence 23455566677777655 24455666777777777777653
No 53
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.4e-37 Score=354.20 Aligned_cols=321 Identities=22% Similarity=0.202 Sum_probs=215.9
Q ss_pred CEEeCcCCccccCCCccccCCCCCCEeeCCCCcCcccccccccccCCCCCccccCeEeccCCcccccCCccCCCCCCCCE
Q 042123 33 AYLDLTWNGFFGTIPPQISNLSNLRYLYLGSNQFSGNILAEVSSESSGGNLRYMSRLVINDNSLSGFIPPHIGNLKFLSQ 112 (849)
Q Consensus 33 ~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 112 (849)
+.++.++++++.+ |..+. ++|+.|+|++|+|++. ....|.++++|++|+|++|.+++..|..|.++++|++
T Consensus 14 ~~v~c~~~~l~~i-p~~~~--~~l~~L~L~~n~l~~~------~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~ 84 (477)
T 2id5_A 14 RAVLCHRKRFVAV-PEGIP--TETRLLDLGKNRIKTL------NQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRT 84 (477)
T ss_dssp TEEECCSCCCSSC-CSCCC--TTCSEEECCSSCCCEE------CTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred CEEEeCCCCcCcC-CCCCC--CCCcEEECCCCccceE------CHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCE
Confidence 4555555555433 22221 3566666666666531 2334555666666666666666666777778888888
Q ss_pred EEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEEcCCCcccccCCcCCCCCCCCCEEEccCCCC
Q 042123 113 LDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLNDNQLIGYIPRPFSNLTSVSTLRLSRNDL 192 (849)
Q Consensus 113 L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 192 (849)
|+|++|+++++.+..|.++++|++|+|++|++++..+..|.++++|++|+|++|.+.++.+..|..+++|++|+|++|++
T Consensus 85 L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 164 (477)
T 2id5_A 85 LGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNL 164 (477)
T ss_dssp EECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCC
T ss_pred EECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcC
Confidence 88888888877667777888888888888888777777788888888888888888887777888888888888888888
Q ss_pred cCcCcccccCCCCCCEEeccCCcCccCCCcCccCccccchhhhccccccCCCCcchhhhhhhhhhccCcCCCCCCCcccC
Q 042123 193 FGSIPDEIGKMRSLSVLDLNQNQFKGVLPPSISNLTNLKELALLYNHLSGSIPPSLGNLILRQLLLSGNHFTGYLPYNIC 272 (849)
Q Consensus 193 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~L~~n~i~~~~~~~~~ 272 (849)
++..+..|.++++|+.|+|++|.+.+..+..|..+++|++|++++|...+.+|....
T Consensus 165 ~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~----------------------- 221 (477)
T 2id5_A 165 TSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCL----------------------- 221 (477)
T ss_dssp SSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTT-----------------------
T ss_pred cccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccc-----------------------
Confidence 766666778888888888888888877777788888888888887766544443221
Q ss_pred CCCCcceeeecccccccccCCCCCCcccccEEEccCccccCchhhhhCCCCCCCEEeccCccccCcccccCCCCCCCcEE
Q 042123 273 RGGALEIFTVSENHFQGTIPTSLRNCTSLIRVRLNGNNLTGNISEALGIYPNLTFIDLSRNNFYGEISSNWGKFPKLGTL 352 (849)
Q Consensus 273 ~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 352 (849)
...+|+.|++++|+++...+..|.++++|+.|+|++|.+++..+..|..+++|+.|+|++|++.+..+..|..+++|+.|
T Consensus 222 ~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 301 (477)
T 2id5_A 222 YGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVL 301 (477)
T ss_dssp TTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEE
T ss_pred cCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEE
Confidence 12245555555555554333455556666666666666666555566666666666666666666666666666666666
Q ss_pred eccCCccccCCCCCccccccccccccccccccc
Q 042123 353 NVSMNNITGGLPREIGNSSQLQAFDLSLNHIVG 385 (849)
Q Consensus 353 ~Ls~N~i~~~~p~~~~~l~~L~~L~L~~N~i~~ 385 (849)
+|++|.+++..+..|..+++|+.|+|++|.+..
T Consensus 302 ~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c 334 (477)
T 2id5_A 302 NVSGNQLTTLEESVFHSVGNLETLILDSNPLAC 334 (477)
T ss_dssp ECCSSCCSCCCGGGBSCGGGCCEEECCSSCEEC
T ss_pred ECCCCcCceeCHhHcCCCcccCEEEccCCCccC
Confidence 666666665555556666666666666666653
No 54
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=2.5e-38 Score=336.23 Aligned_cols=239 Identities=23% Similarity=0.397 Sum_probs=190.8
Q ss_pred cCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeEEE
Q 042123 588 NDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSFLL 655 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~lV 655 (849)
++|+..+.||+|+||+||+|.. .+++.||||++...... ....+.+|+. ++++++...+..++|
T Consensus 20 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 95 (297)
T 3fxz_A 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP----KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVV 95 (297)
T ss_dssp GTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCS----CHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeeccccc----HHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEE
Confidence 6899999999999999999964 57999999998653221 2333444443 367788888999999
Q ss_pred EEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccCC
Q 042123 656 YEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLKP 735 (849)
Q Consensus 656 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~~ 735 (849)
|||+++|+|.+++... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 96 ~e~~~~~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 168 (297)
T 3fxz_A 96 MEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP 168 (297)
T ss_dssp EECCTTCBHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred EECCCCCCHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCC
Confidence 9999999999998643 489999999999999999999999 999999999999999999999999999987766
Q ss_pred CCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCChhh
Q 042123 736 DSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPAPSRSA 815 (849)
Q Consensus 736 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 815 (849)
.........||+.|+|||.+.+..++.++||||+|+++|||++|+.||.......... .......+....+
T Consensus 169 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~-----~~~~~~~~~~~~~---- 239 (297)
T 3fxz_A 169 EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-----LIATNGTPELQNP---- 239 (297)
T ss_dssp TTCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH-----HHHHHCSCCCSCG----
T ss_pred cccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH-----HHHhCCCCCCCCc----
Confidence 5555566789999999999999999999999999999999999999997433211100 0000011111111
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 816 QEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 816 ~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
......+.+++.+||+.||++|||++|++++
T Consensus 240 ~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 240 EKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp GGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred cccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 1222347889999999999999999999886
No 55
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=4.8e-38 Score=338.43 Aligned_cols=259 Identities=34% Similarity=0.561 Sum_probs=203.0
Q ss_pred HHHHHHhcCCCcCceecCCccceEEEEEecCCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecC
Q 042123 581 DEIVKATNDFDAKYCIGNGGHASVYRAELPSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHA 649 (849)
Q Consensus 581 ~~~~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~ 649 (849)
.++..++++|+..+.||+|+||.||+|+..+++.||||++.... ....+.+.+|+. ++++++.+.
T Consensus 32 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 107 (321)
T 2qkw_B 32 VDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPES----SQGIEEFETEIETLSFCRHPHLVSLIGFCDER 107 (321)
T ss_dssp SCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCC----SSHHHHHHHHHHGGGSCCCTTBCCEEEECCCT
T ss_pred HHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccC----hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCC
Confidence 34455678999999999999999999998889999999876532 223445666655 367788888
Q ss_pred CeeEEEEEeccCCChhhhhccccc-ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeec
Q 042123 650 RHSFLLYEFLERGSLAAILNTDAA-AQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFG 728 (849)
Q Consensus 650 ~~~~lV~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG 728 (849)
+..++||||+++|+|.+++..... ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 108 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg 184 (321)
T 2qkw_B 108 NEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFG 184 (321)
T ss_dssp TCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCT
T ss_pred CeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeecc
Confidence 899999999999999999975432 23589999999999999999999998 99999999999999999999999999
Q ss_pred CCcccCCCC--CCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCcccccccccc-------ccccc
Q 042123 729 IAKSLKPDS--SNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSL-------NTDVA 799 (849)
Q Consensus 729 ~a~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~-------~~~~~ 799 (849)
+++...... .......||+.|+|||.+.+..++.++||||||+++|||++|+.||........... .....
T Consensus 185 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 264 (321)
T 2qkw_B 185 ISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQ 264 (321)
T ss_dssp TCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTC
T ss_pred cccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhcccccc
Confidence 998654322 122345689999999999988999999999999999999999999974332111000 00111
Q ss_pred cccccCCCCCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 800 LDQMLDPRLPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
....+++.... ....+....+.+++.+||+.||++|||++|++++|+
T Consensus 265 ~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 311 (321)
T 2qkw_B 265 LEQIVDPNLAD--KIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311 (321)
T ss_dssp CCSSSSSSCTT--CSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHhcChhhcc--ccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 22333333322 223456677899999999999999999999999885
No 56
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1e-37 Score=345.45 Aligned_cols=334 Identities=19% Similarity=0.222 Sum_probs=188.5
Q ss_pred ccccCeEeccCCcccccCCccCCCCCCCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEE
Q 042123 83 LRYMSRLVINDNSLSGFIPPHIGNLKFLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQ 162 (849)
Q Consensus 83 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 162 (849)
+++++.|++++|.+..+.+..|.++++|++|+|++|+++++.+.+|..+++|++|+|++|.+++..+..|+++++|++|+
T Consensus 44 l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 123 (390)
T 3o6n_A 44 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 123 (390)
T ss_dssp GCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEE
Confidence 34555555555555544444455566666666666666655555666666666666666666655555566666666666
Q ss_pred cCCCcccccCCcCCCCCCCCCEEEccCCCCcCcCcccccCCCCCCEEeccCCcCccCCCcCccCccccchhhhccccccC
Q 042123 163 LNDNQLIGYIPRPFSNLTSVSTLRLSRNDLFGSIPDEIGKMRSLSVLDLNQNQFKGVLPPSISNLTNLKELALLYNHLSG 242 (849)
Q Consensus 163 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 242 (849)
|++|++..+++..|..+++|++|+|++|++.+..+..|.++++|++|++++|++++. .+..+++|++|++++|.++
T Consensus 124 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~- 199 (390)
T 3o6n_A 124 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLS- 199 (390)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCS-
T ss_pred CCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeeccccccc-
Confidence 666666655555556666666666666666555555555666666666666665533 1333444444444444433
Q ss_pred CCCcchhhhhhhhhhccCcCCCCCCCcccCCCCCcceeeecccccccccCCCCCCcccccEEEccCccccCchhhhhCCC
Q 042123 243 SIPPSLGNLILRQLLLSGNHFTGYLPYNICRGGALEIFTVSENHFQGTIPTSLRNCTSLIRVRLNGNNLTGNISEALGIY 322 (849)
Q Consensus 243 ~~p~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 322 (849)
+. ...++|+.|++++|.++..+. ...
T Consensus 200 ----------------------------------------------~~-----~~~~~L~~L~l~~n~l~~~~~---~~~ 225 (390)
T 3o6n_A 200 ----------------------------------------------TL-----AIPIAVEELDASHNSINVVRG---PVN 225 (390)
T ss_dssp ----------------------------------------------EE-----ECCSSCSEEECCSSCCCEEEC---CCC
T ss_pred ----------------------------------------------cc-----CCCCcceEEECCCCeeeeccc---ccc
Confidence 10 111234444444444443211 112
Q ss_pred CCCCEEeccCccccCcccccCCCCCCCcEEeccCCccccCCCCCccccccccccccccccccccCchhhcCCCCCcEEEc
Q 042123 323 PNLTFIDLSRNNFYGEISSNWGKFPKLGTLNVSMNNITGGLPREIGNSSQLQAFDLSLNHIVGEIPKELGKLNPLTKLIL 402 (849)
Q Consensus 323 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L 402 (849)
++|+.|++++|.+.+. ..+..+++|++|++++|.+++..|..|..+++|+.|+|++|++++ +|..+..+++|++|+|
T Consensus 226 ~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L 302 (390)
T 3o6n_A 226 VELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDL 302 (390)
T ss_dssp SSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEEC
T ss_pred ccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEEC
Confidence 4455555555555432 234455555555555555555555555555555555555555553 3444556667777777
Q ss_pred cCccccccCcccccccccccccccccCCCCChhhhcccccceeccCCcccccCCCccccccCCCcEEeccCCccccCCCC
Q 042123 403 RGNQITGRLPKEIGSLTKLEYLDFSAIGELPSQICNMKSLEKLNLSHNNLSGSIPSCFEGMHGLSFIDMSYNELQCPVPN 482 (849)
Q Consensus 403 ~~N~l~~~~p~~~~~l~~L~~L~l~~l~~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~ 482 (849)
++|+++ .+|..+..+++|+.|+|++|++++. | +..+++|+.|++++|+|.|.+..
T Consensus 303 ~~n~l~----------------------~~~~~~~~l~~L~~L~L~~N~i~~~-~--~~~~~~L~~L~l~~N~~~~~~~~ 357 (390)
T 3o6n_A 303 SHNHLL----------------------HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCNSLR 357 (390)
T ss_dssp CSSCCC----------------------CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHHHHH
T ss_pred CCCcce----------------------ecCccccccCcCCEEECCCCcccee-C--chhhccCCEEEcCCCCccchhHH
Confidence 777665 3344455667788888888998855 3 67788999999999999997643
Q ss_pred CcccccCcccccccCCCccCC
Q 042123 483 STTFRGASVEALKGNKGLCGS 503 (849)
Q Consensus 483 ~~~~~~~~~~~~~~~~~~c~~ 503 (849)
. .+.......+.++...|..
T Consensus 358 ~-~~~~~~~~~~~~~~~~c~~ 377 (390)
T 3o6n_A 358 A-LFRNVARPAVDDADQHCKI 377 (390)
T ss_dssp H-HTTTCCTTTBCCCCSCCCT
T ss_pred H-HHHHHHhhcccccCceecc
Confidence 2 2232333344455555543
No 57
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=2.6e-38 Score=337.79 Aligned_cols=246 Identities=32% Similarity=0.484 Sum_probs=185.4
Q ss_pred HHhcCCCcCceecCCccceEEEEEecCCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeE
Q 042123 585 KATNDFDAKYCIGNGGHASVYRAELPSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSF 653 (849)
Q Consensus 585 ~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~ 653 (849)
...++|++.+.||+|+||+||+|+. +|+.||||++..... .......+.+|+. .+++++......+
T Consensus 34 i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 110 (309)
T 3p86_A 34 IPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDF--HAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLS 110 (309)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCC--SHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCE
T ss_pred CChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceE
Confidence 3456888999999999999999987 588999999875422 2223345666654 3677888888999
Q ss_pred EEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCCeeecCCCcEEEeeecCCc
Q 042123 654 LLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPP--IVHRDISSKNLLLDLEYEAHVADFGIAK 731 (849)
Q Consensus 654 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~--ivH~dlk~~Nill~~~~~~kl~DfG~a~ 731 (849)
+||||+++|+|.+++........+++.++..++.|++.||+|||+. + |+||||||+||+++.++.+||+|||+++
T Consensus 111 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~ 187 (309)
T 3p86_A 111 IVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSR 187 (309)
T ss_dssp EEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC---
T ss_pred EEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCCCc
Confidence 9999999999999997655444589999999999999999999998 7 9999999999999999999999999998
Q ss_pred ccCCCCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccc--cCCCCC
Q 042123 732 SLKPDSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQM--LDPRLP 809 (849)
Q Consensus 732 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~--~~~~~~ 809 (849)
.............||+.|+|||.+.+..++.++||||||+++|||++|+.||....... ..... ......
T Consensus 188 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~--------~~~~~~~~~~~~~ 259 (309)
T 3p86_A 188 LKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQ--------VVAAVGFKCKRLE 259 (309)
T ss_dssp --------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHH--------HHHHHHHSCCCCC
T ss_pred cccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--------HHHHHHhcCCCCC
Confidence 65544333455679999999999999999999999999999999999999997543211 11111 111111
Q ss_pred CCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 810 APSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 810 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
.+... ...+.+++.+||+.||++|||++++++.|+
T Consensus 260 ~~~~~----~~~l~~li~~~l~~dP~~Rps~~~ll~~L~ 294 (309)
T 3p86_A 260 IPRNL----NPQVAAIIEGCWTNEPWKRPSFATIMDLLR 294 (309)
T ss_dssp CCTTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCccC----CHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 11122 224788999999999999999999999874
No 58
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=1e-37 Score=335.32 Aligned_cols=251 Identities=25% Similarity=0.373 Sum_probs=197.4
Q ss_pred ccccHHHHHHHhcC----------CCcCceecCCccceEEEEEec-CCcEEEEEEecccCCCCchhhHHHHHHHHH----
Q 042123 576 GKILYDEIVKATND----------FDAKYCIGNGGHASVYRAELP-SGEVVAVKKFHSLLPCDQTVDQKEFLTEVE---- 640 (849)
Q Consensus 576 ~~~~~~~~~~~~~~----------f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~ei~---- 640 (849)
+.++++++..+++. |+..+.||+|+||.||+|+.. +|+.||||++..... .....+.+|+.
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~----~~~~~~~~E~~~l~~ 98 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQ----QRRELLFNEVVIMRD 98 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC----CSHHHHHHHHHHHTT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccch----hHHHHHHHHHHHHHh
Confidence 45677888877764 666779999999999999765 799999999865322 22344555654
Q ss_pred -------HhhceeecCCeeEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCC
Q 042123 641 -------AFYGFCSHARHSFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKN 713 (849)
Q Consensus 641 -------~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~N 713 (849)
.+++++...+..++||||+++|+|.+++... .+++.++..++.|++.||+|||+. +|+||||||+|
T Consensus 99 l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~----~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~N 171 (321)
T 2c30_A 99 YQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV----RLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDS 171 (321)
T ss_dssp CCCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGG
T ss_pred CCCCCcceEEEEEEECCEEEEEEecCCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHH
Confidence 3677888888999999999999999998643 489999999999999999999998 99999999999
Q ss_pred eeecCCCcEEEeeecCCcccCCCCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccc
Q 042123 714 LLLDLEYEAHVADFGIAKSLKPDSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSS 793 (849)
Q Consensus 714 ill~~~~~~kl~DfG~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~ 793 (849)
|+++.++.+||+|||++..............||+.|+|||++.+..++.++||||||+++|||++|+.||........
T Consensus 172 Ill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~-- 249 (321)
T 2c30_A 172 ILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQA-- 249 (321)
T ss_dssp EEECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH--
T ss_pred EEECCCCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--
Confidence 999999999999999998776554444567899999999999999999999999999999999999999974322110
Q ss_pred cccccccccccCCCCCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 794 LNTDVALDQMLDPRLPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
.........+.... .......+.+++.+||+.||++|||++|++++
T Consensus 250 ---~~~~~~~~~~~~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 250 ---MKRLRDSPPPKLKN----SHKVSPVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp ---HHHHHHSSCCCCTT----GGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ---HHHHhcCCCCCcCc----cccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00111111111111 11222347889999999999999999999986
No 59
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=6.9e-37 Score=327.32 Aligned_cols=264 Identities=28% Similarity=0.518 Sum_probs=208.0
Q ss_pred cccHHHHHHHhcCCCcC------ceecCCccceEEEEEecCCcEEEEEEecccCCCCchhhHHHHHHHHH----------
Q 042123 577 KILYDEIVKATNDFDAK------YCIGNGGHASVYRAELPSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE---------- 640 (849)
Q Consensus 577 ~~~~~~~~~~~~~f~~~------~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~---------- 640 (849)
.+.+.++..++++|... +.||+|+||.||+|.. +++.||||++..............+.+|+.
T Consensus 14 ~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 92 (307)
T 2nru_A 14 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENL 92 (307)
T ss_dssp ECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTB
T ss_pred cccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCe
Confidence 56789999999999887 8999999999999987 588999999876433333334455666654
Q ss_pred -HhhceeecCCeeEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCC
Q 042123 641 -AFYGFCSHARHSFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLE 719 (849)
Q Consensus 641 -~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~ 719 (849)
.+++++...+..++||||+++|+|.+++........+++.++..++.|++.||+|||+. +|+||||||+||+++.+
T Consensus 93 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~ 169 (307)
T 2nru_A 93 VELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEA 169 (307)
T ss_dssp CCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTT
T ss_pred EEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEcCC
Confidence 36778888889999999999999999997655556699999999999999999999999 99999999999999999
Q ss_pred CcEEEeeecCCcccCCCCCC--eeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCcccccccccc---
Q 042123 720 YEAHVADFGIAKSLKPDSSN--WTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSL--- 794 (849)
Q Consensus 720 ~~~kl~DfG~a~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~--- 794 (849)
+.+||+|||+++........ .....|++.|+|||.+.+ .++.++||||||+++|+|++|+.||...........
T Consensus 170 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~ 248 (307)
T 2nru_A 170 FTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKE 248 (307)
T ss_dssp CCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHH
T ss_pred CcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHH
Confidence 99999999999876543222 223568999999998765 588999999999999999999999975432211000
Q ss_pred ---ccccccccccCCCCCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 795 ---NTDVALDQMLDPRLPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 795 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
.........+++..... .......+.+++.+||+.||++|||+++++++|+
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~ 302 (307)
T 2nru_A 249 EIEDEEKTIEDYIDKKMNDA---DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302 (307)
T ss_dssp HHHTTSCCHHHHSCSSCSCC---CHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred Hhhhhhhhhhhhcccccccc---chHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 01111223344443322 3344566889999999999999999999999875
No 60
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=1.4e-37 Score=334.47 Aligned_cols=239 Identities=23% Similarity=0.378 Sum_probs=192.0
Q ss_pred hcCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeEE
Q 042123 587 TNDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSFL 654 (849)
Q Consensus 587 ~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~l 654 (849)
.++|+..+.||+|+||.||+|++ .+|+.||||++..... .....+.+.+|+. ++++++...+..++
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 91 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL--NPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYL 91 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEE
Confidence 36899999999999999999965 6899999999865422 2223345556654 36778888899999
Q ss_pred EEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccC
Q 042123 655 LYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLK 734 (849)
Q Consensus 655 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~ 734 (849)
||||+++|+|.+++... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 92 v~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 165 (328)
T 3fe3_A 92 IMEYASGGEVFDYLVAH---GRMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFT 165 (328)
T ss_dssp EECCCTTCBHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGS
T ss_pred EEECCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecC
Confidence 99999999999998653 3589999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCeeeccCCccccccccccCCCCC-ccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCh
Q 042123 735 PDSSNWTEFAGTCGYIAPELAYTMKIT-EKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPAPSR 813 (849)
Q Consensus 735 ~~~~~~~~~~g~~~y~aPE~~~~~~~~-~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 813 (849)
.. .......||+.|+|||.+.+..+. .++||||+||++|||++|+.||+.... ......+.......+..
T Consensus 166 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--------~~~~~~i~~~~~~~p~~ 236 (328)
T 3fe3_A 166 VG-GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL--------KELRERVLRGKYRIPFY 236 (328)
T ss_dssp SS-CGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHCCCCCCTT
T ss_pred CC-CccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhCCCCCCCC
Confidence 43 234556899999999999888775 789999999999999999999974321 11222222333332222
Q ss_pred hhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 814 SAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 814 ~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
.. ..+.+++.+||+.||.+|||++|+++|
T Consensus 237 ~s----~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 237 MS----TDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp SC----HHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred CC----HHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 22 237789999999999999999999886
No 61
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=1.8e-37 Score=334.33 Aligned_cols=240 Identities=23% Similarity=0.305 Sum_probs=190.0
Q ss_pred cCCCcCceecCCccceEEEEEec-CCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeEEE
Q 042123 588 NDFDAKYCIGNGGHASVYRAELP-SGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSFLL 655 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~lV 655 (849)
++|+..+.||+|+||.||+|+.. +|+.||+|.+.+.... .......+.+|+. .+++++...+..++|
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVII-AKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhh-hhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 67899999999999999999654 7999999998653110 1112233444433 366778888899999
Q ss_pred EEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccCC
Q 042123 656 YEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLKP 735 (849)
Q Consensus 656 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~~ 735 (849)
|||+++|+|.+++.+. ..+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 84 ~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 157 (337)
T 1o6l_A 84 MEYANGGELFFHLSRE---RVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS 157 (337)
T ss_dssp EECCTTCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred EeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhccc
Confidence 9999999999998653 3589999999999999999999999 999999999999999999999999999987554
Q ss_pred CCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCChhh
Q 042123 736 DSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPAPSRSA 815 (849)
Q Consensus 736 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 815 (849)
.........||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+.......+...
T Consensus 158 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--------~~~~~~i~~~~~~~p~~~- 228 (337)
T 1o6l_A 158 DGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--------ERLFELILMEEIRFPRTL- 228 (337)
T ss_dssp TTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHCCCCCCTTS-
T ss_pred CCCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCH--------HHHHHHHHcCCCCCCCCC-
Confidence 44455667899999999999999999999999999999999999999974321 111122222222222222
Q ss_pred HHHHHHHHHHHhhccCCCCCCCC-----CHHHHHhh
Q 042123 816 QEKLISIMEVAFSCFNESPESRP-----TMKIISQQ 846 (849)
Q Consensus 816 ~~~~~~l~~li~~cl~~dP~~RP-----t~~eil~~ 846 (849)
...+.+++.+||+.||++|| +++|+++|
T Consensus 229 ---s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 229 ---SPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp ---CHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred ---CHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 23478899999999999999 89999876
No 62
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=4e-37 Score=359.56 Aligned_cols=335 Identities=20% Similarity=0.225 Sum_probs=204.8
Q ss_pred ccccCeEeccCCcccccCCccCCCCCCCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEE
Q 042123 83 LRYMSRLVINDNSLSGFIPPHIGNLKFLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQ 162 (849)
Q Consensus 83 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 162 (849)
+.+++.|++++|.+..+++..|.++++|++|+|++|+|+++.|..|..+++|++|+|++|.+++..+..|+++++|++|+
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 129 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 129 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEE
Confidence 45556666666666655555566666666666666666666666666666666666666666666666666666666666
Q ss_pred cCCCcccccCCcCCCCCCCCCEEEccCCCCcCcCcccccCCCCCCEEeccCCcCccCCCcCccCccccchhhhccccccC
Q 042123 163 LNDNQLIGYIPRPFSNLTSVSTLRLSRNDLFGSIPDEIGKMRSLSVLDLNQNQFKGVLPPSISNLTNLKELALLYNHLSG 242 (849)
Q Consensus 163 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 242 (849)
|++|.++++++..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.+++. .+..+++|+.|++++|.++
T Consensus 130 L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~---~~~~l~~L~~L~l~~n~l~- 205 (597)
T 3oja_B 130 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLS- 205 (597)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC---CGGGCTTCSEEECCSSCCS-
T ss_pred eeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCc---ChhhhhhhhhhhcccCccc-
Confidence 666666666666666666666666666666665566666666666666666666543 1333444555555444443
Q ss_pred CCCcchhhhhhhhhhccCcCCCCCCCcccCCCCCcceeeecccccccccCCCCCCcccccEEEccCccccCchhhhhCCC
Q 042123 243 SIPPSLGNLILRQLLLSGNHFTGYLPYNICRGGALEIFTVSENHFQGTIPTSLRNCTSLIRVRLNGNNLTGNISEALGIY 322 (849)
Q Consensus 243 ~~p~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 322 (849)
+ +....+|+.|++++|.++...+.. .
T Consensus 206 ----------------------------------------------~-----l~~~~~L~~L~ls~n~l~~~~~~~---~ 231 (597)
T 3oja_B 206 ----------------------------------------------T-----LAIPIAVEELDASHNSINVVRGPV---N 231 (597)
T ss_dssp ----------------------------------------------E-----EECCTTCSEEECCSSCCCEEECSC---C
T ss_pred ----------------------------------------------c-----ccCCchhheeeccCCccccccccc---C
Confidence 1 111123444444444444222211 1
Q ss_pred CCCCEEeccCccccCcccccCCCCCCCcEEeccCCccccCCCCCccccccccccccccccccccCchhhcCCCCCcEEEc
Q 042123 323 PNLTFIDLSRNNFYGEISSNWGKFPKLGTLNVSMNNITGGLPREIGNSSQLQAFDLSLNHIVGEIPKELGKLNPLTKLIL 402 (849)
Q Consensus 323 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L 402 (849)
++|+.|+|++|.+++ +..+..+++|+.|+|++|.+++..|..|.++++|+.|+|++|.+++ +|..+..+++|+.|+|
T Consensus 232 ~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L 308 (597)
T 3oja_B 232 VELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDL 308 (597)
T ss_dssp SCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEEC
T ss_pred CCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEEC
Confidence 345555555555543 2345555556666666666555555555566666666666666653 3455556677777777
Q ss_pred cCccccccCcccccccccccccccccCCCCChhhhcccccceeccCCcccccCCCccccccCCCcEEeccCCccccCCCC
Q 042123 403 RGNQITGRLPKEIGSLTKLEYLDFSAIGELPSQICNMKSLEKLNLSHNNLSGSIPSCFEGMHGLSFIDMSYNELQCPVPN 482 (849)
Q Consensus 403 ~~N~l~~~~p~~~~~l~~L~~L~l~~l~~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~ 482 (849)
++|+++ .+|..+..+++|+.|+|++|+|++.. +..+++|+.|++++|+|.|.+..
T Consensus 309 s~N~l~----------------------~i~~~~~~l~~L~~L~L~~N~l~~~~---~~~~~~L~~L~l~~N~~~~~~~~ 363 (597)
T 3oja_B 309 SHNHLL----------------------HVERNQPQFDRLENLYLDHNSIVTLK---LSTHHTLKNLTLSHNDWDCNSLR 363 (597)
T ss_dssp CSSCCC----------------------CCGGGHHHHTTCSEEECCSSCCCCCC---CCTTCCCSEEECCSSCEEHHHHH
T ss_pred CCCCCC----------------------ccCcccccCCCCCEEECCCCCCCCcC---hhhcCCCCEEEeeCCCCCChhHH
Confidence 777665 34455566778888889999998653 66788999999999999998643
Q ss_pred CcccccCcccccccCCCccCCC
Q 042123 483 STTFRGASVEALKGNKGLCGSA 504 (849)
Q Consensus 483 ~~~~~~~~~~~~~~~~~~c~~~ 504 (849)
. .+.......+.++...|+.+
T Consensus 364 ~-~~~~~~~~~~~~~~~~C~~~ 384 (597)
T 3oja_B 364 A-LFRNVARPAVDDADQHCKID 384 (597)
T ss_dssp H-HTTTCCTTTBCCCCCCCCTT
T ss_pred H-HHHHHhhhccccccccCCcc
Confidence 2 34444444566777777653
No 63
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=2.1e-36 Score=340.05 Aligned_cols=345 Identities=18% Similarity=0.176 Sum_probs=271.0
Q ss_pred cEEEEecCCCceeeeeCCccCCCCCCCCEEeCcCCccccCCCccccCCCCCCEeeCCCCcCcccccccccccCCCCCccc
Q 042123 6 RVINISLPNIGVNGTLHDFSFSSFPHLAYLDLTWNGFFGTIPPQISNLSNLRYLYLGSNQFSGNILAEVSSESSGGNLRY 85 (849)
Q Consensus 6 ~~~~~~~~~~~~~~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~ 85 (849)
+++.++++.+++.+. + +|..+++|++|+|++|+++++ | ++.+++|++|+|++|++++. .++++++
T Consensus 43 ~L~~L~Ls~n~l~~~-~--~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~---------~~~~l~~ 107 (457)
T 3bz5_A 43 TLTSLDCHNSSITDM-T--GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL---------DVTPLTK 107 (457)
T ss_dssp TCCEEECCSSCCCCC-T--TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC---------CCTTCTT
T ss_pred CCCEEEccCCCcccC-h--hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee---------ecCCCCc
Confidence 578899999999875 3 589999999999999999876 3 99999999999999999852 2788999
Q ss_pred cCeEeccCCcccccCCccCCCCCCCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEEcCC
Q 042123 86 MSRLVINDNSLSGFIPPHIGNLKFLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLND 165 (849)
Q Consensus 86 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 165 (849)
|++|++++|.+++. | ++++++|++|++++|+++++ .+..+++|++|++++|...+.. .+..+++|+.|++++
T Consensus 108 L~~L~L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~ 179 (457)
T 3bz5_A 108 LTYLNCDTNKLTKL-D--VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSF 179 (457)
T ss_dssp CCEEECCSSCCSCC-C--CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCS
T ss_pred CCEEECCCCcCCee-c--CCCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCccccc--ccccCCcCCEEECCC
Confidence 99999999999974 4 89999999999999999975 3889999999999999654444 588999999999999
Q ss_pred CcccccCCcCCCCCCCCCEEEccCCCCcCcCcccccCCCCCCEEeccCCcCccCCCcCccCccccchhhhccccccCCCC
Q 042123 166 NQLIGYIPRPFSNLTSVSTLRLSRNDLFGSIPDEIGKMRSLSVLDLNQNQFKGVLPPSISNLTNLKELALLYNHLSGSIP 245 (849)
Q Consensus 166 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p 245 (849)
|++++++ +..+++|++|++++|++++. .+..+++|++|++++|++++ +| +..+++|++|++++|++++..+
T Consensus 180 n~l~~l~---l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~ 250 (457)
T 3bz5_A 180 NKITELD---VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDV 250 (457)
T ss_dssp SCCCCCC---CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCC
T ss_pred Cccceec---cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCH
Confidence 9999963 88999999999999999864 38899999999999999997 45 8899999999999999996544
Q ss_pred cchhhh--------hhhhhhccCcCCCCCCCcccCCCCCcceeeecccccccccCCCCCCcccccEEEccCccccCchhh
Q 042123 246 PSLGNL--------ILRQLLLSGNHFTGYLPYNICRGGALEIFTVSENHFQGTIPTSLRNCTSLIRVRLNGNNLTGNISE 317 (849)
Q Consensus 246 ~~~~~~--------~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 317 (849)
..+..+ .|+.|++++|.+.+.+| +..+++|+.|++++|...+.+|.. ..+|+.|+++
T Consensus 251 ~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~~---~~~L~~L~l~---------- 315 (457)
T 3bz5_A 251 STLSKLTTLHCIQTDLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDCQ---AAGITELDLS---------- 315 (457)
T ss_dssp TTCTTCCEEECTTCCCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEECT---TCCCSCCCCT----------
T ss_pred HHCCCCCEEeccCCCCCEEECCCCccCCccc--ccccccCCEEECCCCcccceeccC---CCcceEechh----------
Confidence 443332 13444444444443333 234455555555555544444421 2333333333
Q ss_pred hhCCCCCCCEEeccCccccCcccccCCCCCCCcEEeccCCccccCCCCCccccccccccccccccccccCchhhcCCCCC
Q 042123 318 ALGIYPNLTFIDLSRNNFYGEISSNWGKFPKLGTLNVSMNNITGGLPREIGNSSQLQAFDLSLNHIVGEIPKELGKLNPL 397 (849)
Q Consensus 318 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L 397 (849)
.+++|+.|+|++|++++. .+..+++|+.|++++|++++ ++.|..|++++|.+.|. ..+..|
T Consensus 316 ---~~~~L~~L~L~~N~l~~l---~l~~l~~L~~L~l~~N~l~~--------l~~L~~L~l~~n~l~g~-----~~~~~l 376 (457)
T 3bz5_A 316 ---QNPKLVYLYLNNTELTEL---DVSHNTKLKSLSCVNAHIQD--------FSSVGKIPALNNNFEAE-----GQTITM 376 (457)
T ss_dssp ---TCTTCCEEECTTCCCSCC---CCTTCTTCSEEECCSSCCCB--------CTTGGGSSGGGTSEEEE-----EEEEEC
T ss_pred ---hcccCCEEECCCCccccc---ccccCCcCcEEECCCCCCCC--------ccccccccccCCcEEec-----ceeeec
Confidence 346888999999998874 27888899999999998884 35677888888888865 345667
Q ss_pred cEEEccCccccccCccccc
Q 042123 398 TKLILRGNQITGRLPKEIG 416 (849)
Q Consensus 398 ~~L~L~~N~l~~~~p~~~~ 416 (849)
+.+++++|+++|.+|..+.
T Consensus 377 ~~l~l~~N~l~g~ip~~~~ 395 (457)
T 3bz5_A 377 PKETLTNNSLTIAVSPDLL 395 (457)
T ss_dssp CCBCCBTTBEEEECCTTCB
T ss_pred CccccccCcEEEEcChhHh
Confidence 8889999999988887654
No 64
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=7.3e-37 Score=327.52 Aligned_cols=243 Identities=26% Similarity=0.458 Sum_probs=189.5
Q ss_pred cCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeEEE
Q 042123 588 NDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSFLL 655 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~lV 655 (849)
++|...+.||+|+||+||+|.. .+++.||+|++... .....+.+.+|+. .+++++.+++..++|
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~----~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 85 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRF----DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFI 85 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCC----CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccC----CHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEE
Confidence 6788899999999999999965 46999999988542 2334556667755 367788888999999
Q ss_pred EEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccCC
Q 042123 656 YEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLKP 735 (849)
Q Consensus 656 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~~ 735 (849)
|||+++|+|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 86 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 160 (310)
T 3s95_A 86 TEYIKGGTLRGIIKSMD--SQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVD 160 (310)
T ss_dssp EECCTTCBHHHHHHHCC--TTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC-
T ss_pred EEecCCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceeccc
Confidence 99999999999997533 3589999999999999999999999 999999999999999999999999999987644
Q ss_pred CCCC--------------eeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccc
Q 042123 736 DSSN--------------WTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALD 801 (849)
Q Consensus 736 ~~~~--------------~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~ 801 (849)
.... .....||+.|+|||.+.+..++.++||||||+++|||++|..||......... ......
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~---~~~~~~ 237 (310)
T 3s95_A 161 EKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMD---FGLNVR 237 (310)
T ss_dssp -------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTT---SSBCHH
T ss_pred ccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHH---Hhhhhh
Confidence 3221 11457899999999999999999999999999999999999998643221110 001111
Q ss_pred cccCCCCCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 802 QMLDPRLPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
...+...+.. . ...+.+++.+||+.||++|||++++++.|+
T Consensus 238 ~~~~~~~~~~--~----~~~l~~li~~~l~~dP~~Rps~~~l~~~L~ 278 (310)
T 3s95_A 238 GFLDRYCPPN--C----PPSFFPITVRCCDLDPEKRPSFVKLEHWLE 278 (310)
T ss_dssp HHHHHTCCTT--C----CTTHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ccccccCCCC--C----CHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 1111111111 1 113778999999999999999999998874
No 65
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=7e-38 Score=339.88 Aligned_cols=242 Identities=24% Similarity=0.368 Sum_probs=184.7
Q ss_pred HhcCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHH------------HHHhhceeecCCee
Q 042123 586 ATNDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTE------------VEAFYGFCSHARHS 652 (849)
Q Consensus 586 ~~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e------------i~~~~~~~~~~~~~ 652 (849)
..++|+..+.||+|+||+||+|+. .+++.||||++...... .......+..| +..+++++...+..
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~-~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~ 99 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVIL-QDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRL 99 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHH-HHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhc-chhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEE
Confidence 347899999999999999999965 46899999998653110 11111222222 22467788888999
Q ss_pred EEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcc
Q 042123 653 FLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKS 732 (849)
Q Consensus 653 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~ 732 (849)
|+||||+++|+|.+++... ..+++.++..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 100 ~lv~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~ 173 (353)
T 3txo_A 100 FFVMEFVNGGDLMFHIQKS---RRFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKE 173 (353)
T ss_dssp EEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceee
Confidence 9999999999999998654 3589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCC
Q 042123 733 LKPDSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPAPS 812 (849)
Q Consensus 733 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (849)
...........+||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+.......+.
T Consensus 174 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~--------~~~~~~i~~~~~~~p~ 245 (353)
T 3txo_A 174 GICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENE--------DDLFEAILNDEVVYPT 245 (353)
T ss_dssp SCC---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHCCCCCCT
T ss_pred cccCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCH--------HHHHHHHHcCCCCCCC
Confidence 55444455667899999999999988899999999999999999999999974321 1222333333333222
Q ss_pred hhhHHHHHHHHHHHhhccCCCCCCCCCH------HHHHhh
Q 042123 813 RSAQEKLISIMEVAFSCFNESPESRPTM------KIISQQ 846 (849)
Q Consensus 813 ~~~~~~~~~l~~li~~cl~~dP~~RPt~------~eil~~ 846 (849)
... ..+.+++.+||++||++||++ +|+++|
T Consensus 246 ~~~----~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~h 281 (353)
T 3txo_A 246 WLH----EDATGILKSFMTKNPTMRLGSLTQGGEHAILRH 281 (353)
T ss_dssp TSC----HHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTS
T ss_pred CCC----HHHHHHHHHHhhhCHHHccCCcccCCHHHHhhC
Confidence 222 237789999999999999998 778765
No 66
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=1.8e-37 Score=340.42 Aligned_cols=250 Identities=25% Similarity=0.382 Sum_probs=190.8
Q ss_pred hcCCCcCceecCCccceEEEEEec-CCcEEEEEEecccCCCCc-----hhhHHHHHHH------HHHhhceeecCCeeEE
Q 042123 587 TNDFDAKYCIGNGGHASVYRAELP-SGEVVAVKKFHSLLPCDQ-----TVDQKEFLTE------VEAFYGFCSHARHSFL 654 (849)
Q Consensus 587 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~-----~~~~~~~~~e------i~~~~~~~~~~~~~~l 654 (849)
.++|+..+.||+|+||+||+|+.. +++.||||++.+...... ...+...+.. +..+++++......++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 368999999999999999999654 688999999875422111 1112222222 3347788888999999
Q ss_pred EEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccC
Q 042123 655 LYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLK 734 (849)
Q Consensus 655 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~ 734 (849)
||||+++|+|.+++.+. ..+++.++..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 131 V~E~~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~~ 204 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 204 (396)
T ss_dssp EEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEEcCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeecc
Confidence 99999999999998653 3599999999999999999999999 99999999999999999999999999998755
Q ss_pred CCCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccc-cccccccccCCCCCCCCh
Q 042123 735 PDSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLN-TDVALDQMLDPRLPAPSR 813 (849)
Q Consensus 735 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 813 (849)
.........+||+.|+|||++.+..++.++||||+||++|||++|+.||............ .......+.......+..
T Consensus 205 ~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~ 284 (396)
T 4dc2_A 205 RPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRS 284 (396)
T ss_dssp CTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCCCCTT
T ss_pred cCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccCCCCc
Confidence 4445556678999999999999999999999999999999999999999743322111111 111222233333332222
Q ss_pred hhHHHHHHHHHHHhhccCCCCCCCCCH------HHHHhh
Q 042123 814 SAQEKLISIMEVAFSCFNESPESRPTM------KIISQQ 846 (849)
Q Consensus 814 ~~~~~~~~l~~li~~cl~~dP~~RPt~------~eil~~ 846 (849)
.. ..+.+++.+||+.||++||++ +||++|
T Consensus 285 ~s----~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~H 319 (396)
T 4dc2_A 285 LS----VKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 319 (396)
T ss_dssp SC----HHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHS
T ss_pred CC----HHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcC
Confidence 22 347789999999999999995 677765
No 67
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.3e-37 Score=334.42 Aligned_cols=239 Identities=24% Similarity=0.367 Sum_probs=181.4
Q ss_pred hcCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeEE
Q 042123 587 TNDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSFL 654 (849)
Q Consensus 587 ~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~l 654 (849)
.++|+..+.||+|+||+||+|+. .+|+.||||++........ ...+.+|+. .+++++...+..++
T Consensus 9 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~---~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~l 85 (347)
T 3zgw_A 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSD---LPRIKTEIEALKNLRHQHICQLYHVLETANKIFM 85 (347)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC------CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred hcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchH---HHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEE
Confidence 47899999999999999999964 5799999999865432211 123344433 47788888899999
Q ss_pred EEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccC
Q 042123 655 LYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLK 734 (849)
Q Consensus 655 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~ 734 (849)
||||+++|+|.+++... ..+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 86 v~E~~~gg~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~~~ 159 (347)
T 3zgw_A 86 VLEYCPGGELFDYIISQ---DRLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPK 159 (347)
T ss_dssp EEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC--
T ss_pred EEeCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCccccc
Confidence 99999999999998653 3589999999999999999999999 99999999999999999999999999988665
Q ss_pred CCC-CCeeeccCCccccccccccCCCC-CccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCC
Q 042123 735 PDS-SNWTEFAGTCGYIAPELAYTMKI-TEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPAPS 812 (849)
Q Consensus 735 ~~~-~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (849)
... .......||+.|+|||.+.+..+ +.++||||+||++|+|++|+.||+..... .....+.......+.
T Consensus 160 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~--------~~~~~i~~~~~~~p~ 231 (347)
T 3zgw_A 160 GNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVM--------ALYKKIMRGKYDVPK 231 (347)
T ss_dssp ------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHTCCCCCT
T ss_pred CCCCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHH--------HHHHHHHcCCCCCCC
Confidence 332 23455679999999999988776 88999999999999999999999743211 122222222322222
Q ss_pred hhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 813 RSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 813 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
... ..+.+++.+||+.||++|||++|++++
T Consensus 232 ~~s----~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 232 WLS----PSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp TCC----HHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred CCC----HHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 222 236789999999999999999999976
No 68
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=4e-37 Score=334.75 Aligned_cols=245 Identities=19% Similarity=0.263 Sum_probs=194.1
Q ss_pred hcCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCc--hhhHHHHHHHHH-----------HhhceeecCCee
Q 042123 587 TNDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQ--TVDQKEFLTEVE-----------AFYGFCSHARHS 652 (849)
Q Consensus 587 ~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~--~~~~~~~~~ei~-----------~~~~~~~~~~~~ 652 (849)
.+.|++.+.||+|+||.||+|+. .+|+.||||.+........ ......+.+|+. .+++++......
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 36799999999999999999965 4799999999876432211 112345556654 367788888999
Q ss_pred EEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCC----cEEEeeec
Q 042123 653 FLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEY----EAHVADFG 728 (849)
Q Consensus 653 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~----~~kl~DfG 728 (849)
++||||+++|+|.+++... ..+++.++..++.||+.||+|||+. +|+||||||+||+++.++ .+||+|||
T Consensus 91 ~lv~e~~~gg~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DFG 164 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQK---ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFG 164 (361)
T ss_dssp EEEEECCCSCBHHHHHTTC---SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCS
T ss_pred EEEEEcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEecC
Confidence 9999999999999999653 3589999999999999999999999 999999999999998877 79999999
Q ss_pred CCcccCCCCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCC
Q 042123 729 IAKSLKPDSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRL 808 (849)
Q Consensus 729 ~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 808 (849)
++...... .......||+.|+|||++.+..++.++||||+||++|+|++|..||..... ......+.....
T Consensus 165 ~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~--------~~~~~~i~~~~~ 235 (361)
T 2yab_A 165 LAHEIEDG-VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK--------QETLANITAVSY 235 (361)
T ss_dssp SCEECCTT-CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH--------HHHHHHHHTTCC
T ss_pred CceEcCCC-CccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhcCC
Confidence 99876543 233456799999999999998999999999999999999999999974321 122222333332
Q ss_pred CCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 809 PAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 809 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
..+...+......+.+++.+||+.||++|||++|+++|
T Consensus 236 ~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 273 (361)
T 2yab_A 236 DFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (361)
T ss_dssp CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred CCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 22222222233458899999999999999999999976
No 69
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=7.3e-37 Score=335.03 Aligned_cols=244 Identities=23% Similarity=0.405 Sum_probs=189.1
Q ss_pred cCCCcCceecCCccceEEEEEe--------cCCcEEEEEEecccCCCCchhhHHHHHHHHH------------Hhhceee
Q 042123 588 NDFDAKYCIGNGGHASVYRAEL--------PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE------------AFYGFCS 647 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~------------~~~~~~~ 647 (849)
++|+..+.||+|+||.||+|+. .++..||||++.... .....+.+.+|+. .+++++.
T Consensus 81 ~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~ 157 (370)
T 2psq_A 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA---TEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 157 (370)
T ss_dssp GGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTC---BHHHHHHHHHHHHHHHHSCCCTTBCCEEEEEC
T ss_pred HHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCc---CHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEc
Confidence 6788899999999999999965 245679999986542 2223344555544 3667788
Q ss_pred cCCeeEEEEEeccCCChhhhhccccc-------------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCe
Q 042123 648 HARHSFLLYEFLERGSLAAILNTDAA-------------AQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNL 714 (849)
Q Consensus 648 ~~~~~~lV~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Ni 714 (849)
..+..|+||||+++|+|.+++..... ...+++.++..++.||+.||+|||+. +|+||||||+||
T Consensus 158 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NI 234 (370)
T 2psq_A 158 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNV 234 (370)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGE
T ss_pred cCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhE
Confidence 88899999999999999999975431 23589999999999999999999999 999999999999
Q ss_pred eecCCCcEEEeeecCCcccCCCCC--CeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccc
Q 042123 715 LLDLEYEAHVADFGIAKSLKPDSS--NWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIK-GKHPRDFLSSISS 791 (849)
Q Consensus 715 ll~~~~~~kl~DfG~a~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~t-g~~Pf~~~~~~~~ 791 (849)
+++.++.+||+|||+++....... ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||......
T Consensus 235 ll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~-- 312 (370)
T 2psq_A 235 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE-- 312 (370)
T ss_dssp EECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--
T ss_pred EECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH--
Confidence 999999999999999986654322 1233456789999999999999999999999999999999 99998743211
Q ss_pred cccccccccccccCCCCCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 792 SSLNTDVALDQMLDPRLPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
.....+........+. .....+.+++.+||+.||++|||+.|++++|+
T Consensus 313 ------~~~~~~~~~~~~~~~~---~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~ 360 (370)
T 2psq_A 313 ------ELFKLLKEGHRMDKPA---NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 360 (370)
T ss_dssp ------GHHHHHHTTCCCCCCT---TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ------HHHHHHhcCCCCCCCC---CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 1111111211111111 11234788999999999999999999999875
No 70
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=4.9e-37 Score=342.86 Aligned_cols=245 Identities=20% Similarity=0.289 Sum_probs=192.4
Q ss_pred HhcCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeE
Q 042123 586 ATNDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSF 653 (849)
Q Consensus 586 ~~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~ 653 (849)
..++|+..+.||+|+||.||+|.. .+|+.||+|.+..... .......+.+|+. ++++++.+.+..+
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 86 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKL--SARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHY 86 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSC--HHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEE
Confidence 457899999999999999999954 5799999999875422 2223344555644 3678888899999
Q ss_pred EEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeec---CCCcEEEeeecCC
Q 042123 654 LLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLD---LEYEAHVADFGIA 730 (849)
Q Consensus 654 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~---~~~~~kl~DfG~a 730 (849)
+||||+++|+|.+.+... ..+++.++..++.||+.||+|||+. +|+||||||+||+++ .++.+||+|||++
T Consensus 87 lv~E~~~gg~L~~~i~~~---~~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a 160 (444)
T 3soa_A 87 LIFDLVTGGELFEDIVAR---EYYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLA 160 (444)
T ss_dssp EEECCCBCCBHHHHHHHC---SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSC
T ss_pred EEEEeCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCcee
Confidence 999999999999998654 3489999999999999999999999 999999999999998 4578999999999
Q ss_pred cccCCCCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCC
Q 042123 731 KSLKPDSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPA 810 (849)
Q Consensus 731 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (849)
..............||+.|+|||++.+..++.++||||+||++|+|++|+.||..... ......+.......
T Consensus 161 ~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~--------~~~~~~i~~~~~~~ 232 (444)
T 3soa_A 161 IEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ--------HRLYQQIKAGAYDF 232 (444)
T ss_dssp BCCCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSH--------HHHHHHHHHTCCCC
T ss_pred EEecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccH--------HHHHHHHHhCCCCC
Confidence 8776555555567899999999999999999999999999999999999999964321 11122222222211
Q ss_pred CChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 811 PSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 811 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
+..........+.+++.+||+.||++|||++|+++|
T Consensus 233 ~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 233 PSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp CTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 111111223457899999999999999999999986
No 71
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=1.5e-37 Score=331.50 Aligned_cols=249 Identities=26% Similarity=0.402 Sum_probs=181.7
Q ss_pred hcCCCcCceecCCccceEEEEEecCCcEEEEEEecccCCCCchhhHHHHHHH-------HHHhhceeec----CCeeEEE
Q 042123 587 TNDFDAKYCIGNGGHASVYRAELPSGEVVAVKKFHSLLPCDQTVDQKEFLTE-------VEAFYGFCSH----ARHSFLL 655 (849)
Q Consensus 587 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e-------i~~~~~~~~~----~~~~~lV 655 (849)
.++|+..+.||+|+||+||+|+. +++.||||++..... .....+.+.... +.++++++.. ....++|
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~-~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv 84 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRDE-KSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLI 84 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGGGH-HHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccccc-hhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEe
Confidence 46899999999999999999988 689999999864311 000111111111 1124444322 3568999
Q ss_pred EEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCeEecCCCCCCeeecCCCcEEEeee
Q 042123 656 YEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLH--------HDCFPPIVHRDISSKNLLLDLEYEAHVADF 727 (849)
Q Consensus 656 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH--------~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 727 (849)
|||+++|+|.++++.. .+++.++.+++.|++.||+||| +. +|+||||||+||+++.++.+||+||
T Consensus 85 ~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~kl~Df 157 (301)
T 3q4u_A 85 THYHEMGSLYDYLQLT----TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQCCIADL 157 (301)
T ss_dssp ECCCTTCBHHHHHTTC----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCEEECCC
T ss_pred hhhccCCCHHHHHhhc----ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCEEEeeC
Confidence 9999999999999543 4899999999999999999999 76 9999999999999999999999999
Q ss_pred cCCcccCCCCCC----eeeccCCccccccccccCC------CCCccchHHHHHHHHHHHHhC----------CCCCCccc
Q 042123 728 GIAKSLKPDSSN----WTEFAGTCGYIAPELAYTM------KITEKCDVYSFGVLMWEVIKG----------KHPRDFLS 787 (849)
Q Consensus 728 G~a~~~~~~~~~----~~~~~g~~~y~aPE~~~~~------~~~~~~Dv~SlGvil~el~tg----------~~Pf~~~~ 787 (849)
|+++........ .....||+.|+|||.+.+. .++.++||||||+++|||++| +.||....
T Consensus 158 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~ 237 (301)
T 3q4u_A 158 GLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVV 237 (301)
T ss_dssp TTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTS
T ss_pred CCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccC
Confidence 999765443222 2234789999999998876 456799999999999999999 67765322
Q ss_pred cccccccccccccccc--cCCCCCCCC--hhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 788 SISSSSLNTDVALDQM--LDPRLPAPS--RSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 788 ~~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
..... ....... .+...+..+ .........+.+++.+||+.||++|||++||++.|+
T Consensus 238 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~ 298 (301)
T 3q4u_A 238 PNDPS----FEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLT 298 (301)
T ss_dssp CSSCC----HHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHH
T ss_pred CCCcc----hhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHh
Confidence 11100 0111111 111111111 122345567899999999999999999999999875
No 72
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.3e-37 Score=330.15 Aligned_cols=241 Identities=21% Similarity=0.282 Sum_probs=192.6
Q ss_pred hcCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeEE
Q 042123 587 TNDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSFL 654 (849)
Q Consensus 587 ~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~l 654 (849)
.++|+..+.||+|+||.||+|.. .+++.||+|.+... ......+.+|+. ++++++.+.+..++
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-----~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 78 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-----GTDQVLVKKEISILNIARHRNILHLHESFESMEELVM 78 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-----THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEE
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC-----cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEE
Confidence 36889999999999999999965 46889999998643 122334445544 36788888899999
Q ss_pred EEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecC--CCcEEEeeecCCcc
Q 042123 655 LYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDL--EYEAHVADFGIAKS 732 (849)
Q Consensus 655 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~--~~~~kl~DfG~a~~ 732 (849)
||||+++|+|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+++.
T Consensus 79 v~e~~~g~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~ 153 (321)
T 1tki_A 79 IFEFISGLDIFERINTSA--FELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQ 153 (321)
T ss_dssp EECCCCCCBHHHHHTSSS--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEE
T ss_pred EEEeCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeE
Confidence 999999999999996543 3589999999999999999999999 9999999999999987 78999999999987
Q ss_pred cCCCCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCC
Q 042123 733 LKPDSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPAPS 812 (849)
Q Consensus 733 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (849)
.... .......||+.|+|||.+.+..++.++||||+|+++|+|++|+.||..... ......+.......+.
T Consensus 154 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--------~~~~~~i~~~~~~~~~ 224 (321)
T 1tki_A 154 LKPG-DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN--------QQIIENIMNAEYTFDE 224 (321)
T ss_dssp CCTT-CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSH--------HHHHHHHHHTCCCCCH
T ss_pred CCCC-CccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCH--------HHHHHHHHcCCCCCCh
Confidence 7543 334556799999999999988899999999999999999999999974321 1222223333332222
Q ss_pred hhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 813 RSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 813 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
.........+.+++.+||+.||++|||+.|+++|
T Consensus 225 ~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 225 EAFKEISIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp HHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred hhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 2222234458899999999999999999999986
No 73
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=1.7e-37 Score=335.54 Aligned_cols=243 Identities=24% Similarity=0.353 Sum_probs=188.5
Q ss_pred HHhcCCCcCceecCCccceEEEEEec-CCcEEEEEEecccCCCCchhhHHHHHHH------------HHHhhceeecCCe
Q 042123 585 KATNDFDAKYCIGNGGHASVYRAELP-SGEVVAVKKFHSLLPCDQTVDQKEFLTE------------VEAFYGFCSHARH 651 (849)
Q Consensus 585 ~~~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e------------i~~~~~~~~~~~~ 651 (849)
...++|...+.||+|+||.||+|+.. +|+.||||+++...... .........| +.++++++.....
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~ 92 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLM-DDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN 92 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHH-TTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhh-hhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence 34578999999999999999999764 68999999986531100 0011122222 2246778888899
Q ss_pred eEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCc
Q 042123 652 SFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAK 731 (849)
Q Consensus 652 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~ 731 (849)
.|+||||+++|+|.+++... ..+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 93 ~~lv~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~ 166 (345)
T 1xjd_A 93 LFFVMEYLNGGDLMYHIQSC---HKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCK 166 (345)
T ss_dssp EEEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred EEEEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhh
Confidence 99999999999999998653 3589999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCC
Q 042123 732 SLKPDSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPAP 811 (849)
Q Consensus 732 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (849)
.............||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+.......+
T Consensus 167 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--------~~~~~~i~~~~~~~p 238 (345)
T 1xjd_A 167 ENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE--------EELFHSIRMDNPFYP 238 (345)
T ss_dssp CCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHCCCCCC
T ss_pred hcccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCH--------HHHHHHHHhCCCCCC
Confidence 755444445667899999999999999999999999999999999999999974321 111122222222111
Q ss_pred ChhhHHHHHHHHHHHhhccCCCCCCCCCHH-HHHhh
Q 042123 812 SRSAQEKLISIMEVAFSCFNESPESRPTMK-IISQQ 846 (849)
Q Consensus 812 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~-eil~~ 846 (849)
... ...+.+++.+||+.||++||++. +|++|
T Consensus 239 ~~~----s~~~~~li~~lL~~dp~~R~~~~~~i~~h 270 (345)
T 1xjd_A 239 RWL----EKEAKDLLVKLFVREPEKRLGVRGDIRQH 270 (345)
T ss_dssp TTS----CHHHHHHHHHHSCSSGGGSBTTBSCGGGS
T ss_pred ccc----CHHHHHHHHHHhcCCHhHcCCChHHHHcC
Confidence 111 23477899999999999999998 77764
No 74
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=8.4e-37 Score=330.76 Aligned_cols=248 Identities=26% Similarity=0.367 Sum_probs=189.5
Q ss_pred cCCCcCceecCCccceEEEEEec-CCcEEEEEEecccCCCCchhhHHHHHHHH------------HHhhceeecCCeeEE
Q 042123 588 NDFDAKYCIGNGGHASVYRAELP-SGEVVAVKKFHSLLPCDQTVDQKEFLTEV------------EAFYGFCSHARHSFL 654 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~ei------------~~~~~~~~~~~~~~l 654 (849)
++|+..+.||+|+||.||+|+.. +++.||+|++........ .....+.+|. ..+++++......++
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~-~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 87 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDD-EDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 87 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSH-HHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcch-HHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence 57889999999999999999664 689999999976432211 1122233332 236677888899999
Q ss_pred EEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccC
Q 042123 655 LYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLK 734 (849)
Q Consensus 655 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~ 734 (849)
||||+++|+|.+++.+. ..+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 88 v~e~~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~ 161 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 161 (345)
T ss_dssp EECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCSC
T ss_pred EEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEecccccccc
Confidence 99999999999998653 3589999999999999999999999 99999999999999999999999999998754
Q ss_pred CCCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCcccccccccc-ccccccccccCCCCCCCCh
Q 042123 735 PDSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSL-NTDVALDQMLDPRLPAPSR 813 (849)
Q Consensus 735 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 813 (849)
..........||+.|+|||++.+..++.++||||+||++|||++|+.||........... ........+.......+..
T Consensus 162 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~ 241 (345)
T 3a8x_A 162 RPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRS 241 (345)
T ss_dssp CTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCCCCTT
T ss_pred CCCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCCCCCC
Confidence 444445667899999999999999999999999999999999999999974332111111 1111112222222222222
Q ss_pred hhHHHHHHHHHHHhhccCCCCCCCCCH------HHHHhh
Q 042123 814 SAQEKLISIMEVAFSCFNESPESRPTM------KIISQQ 846 (849)
Q Consensus 814 ~~~~~~~~l~~li~~cl~~dP~~RPt~------~eil~~ 846 (849)
. ...+.+++.+||+.||++||++ +|+++|
T Consensus 242 ~----s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~h 276 (345)
T 3a8x_A 242 L----SVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 276 (345)
T ss_dssp S----CHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTS
T ss_pred C----CHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcC
Confidence 2 2347789999999999999995 677765
No 75
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=3e-37 Score=335.89 Aligned_cols=248 Identities=19% Similarity=0.252 Sum_probs=192.2
Q ss_pred hcCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCC-CCchhhHHHHHHHHH-----------HhhceeecCCeeE
Q 042123 587 TNDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLP-CDQTVDQKEFLTEVE-----------AFYGFCSHARHSF 653 (849)
Q Consensus 587 ~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~ 653 (849)
.+.|+..+.||+|+||.||+|.. .+++.||||++..... .........+.+|+. ++++++...+..+
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 35799999999999999999965 5799999999853211 011112344555544 3677888889999
Q ss_pred EEEEeccCCChhhhhcccc-cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCc---EEEeeecC
Q 042123 654 LLYEFLERGSLAAILNTDA-AAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYE---AHVADFGI 729 (849)
Q Consensus 654 lV~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~---~kl~DfG~ 729 (849)
+||||+++|+|.+++.... ....+++.++..++.||+.||+|||+. +|+||||||+||+++.++. +||+|||+
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 9999999999988876443 233589999999999999999999999 9999999999999987654 99999999
Q ss_pred CcccCCCCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCC
Q 042123 730 AKSLKPDSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLP 809 (849)
Q Consensus 730 a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 (849)
++.............||+.|+|||++.+..++.++||||+||++|+|++|+.||.... ......+......
T Consensus 180 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~---------~~~~~~i~~~~~~ 250 (351)
T 3c0i_A 180 AIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK---------ERLFEGIIKGKYK 250 (351)
T ss_dssp CEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH---------HHHHHHHHHTCCC
T ss_pred eeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH---------HHHHHHHHcCCCC
Confidence 9887654444455689999999999999999999999999999999999999997422 1122222222222
Q ss_pred CCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 810 APSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 810 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
.....+......+.+++.+||+.||++|||+.|+++|
T Consensus 251 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 287 (351)
T 3c0i_A 251 MNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNH 287 (351)
T ss_dssp CCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 2221222233458899999999999999999999875
No 76
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=4.2e-37 Score=333.52 Aligned_cols=242 Identities=22% Similarity=0.328 Sum_probs=189.4
Q ss_pred HhcCCCcCceecCCccceEEEEEec-CCcEEEEEEecccCCCCchhhHHHHHHHHH------------HhhceeecCCee
Q 042123 586 ATNDFDAKYCIGNGGHASVYRAELP-SGEVVAVKKFHSLLPCDQTVDQKEFLTEVE------------AFYGFCSHARHS 652 (849)
Q Consensus 586 ~~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~ei~------------~~~~~~~~~~~~ 652 (849)
..++|+..+.||+|+||.||+|+.. +++.||||++...... .......+..|.. .+++++...+..
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~-~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~ 96 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVI-QDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL 96 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHH-HTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh-cchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEE
Confidence 3478999999999999999999765 5889999998653110 0111223333322 356677788899
Q ss_pred EEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcc
Q 042123 653 FLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKS 732 (849)
Q Consensus 653 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~ 732 (849)
|+||||+++|+|.+++... ..+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 97 ~lv~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~ 170 (353)
T 2i0e_A 97 YFVMEYVNGGDLMYHIQQV---GRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKE 170 (353)
T ss_dssp EEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEEeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCcccc
Confidence 9999999999999998653 3589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCC
Q 042123 733 LKPDSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPAPS 812 (849)
Q Consensus 733 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (849)
............||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+.......+.
T Consensus 171 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~--------~~~~~~i~~~~~~~p~ 242 (353)
T 2i0e_A 171 NIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE--------DELFQSIMEHNVAYPK 242 (353)
T ss_dssp CCCTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHCCCCCCT
T ss_pred cccCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCH--------HHHHHHHHhCCCCCCC
Confidence 55444445667899999999999999999999999999999999999999974321 1222223333332222
Q ss_pred hhhHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHhh
Q 042123 813 RSAQEKLISIMEVAFSCFNESPESRPT-----MKIISQQ 846 (849)
Q Consensus 813 ~~~~~~~~~l~~li~~cl~~dP~~RPt-----~~eil~~ 846 (849)
.. ...+.+++.+||+.||++||+ +++|++|
T Consensus 243 ~~----s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 243 SM----SKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp TS----CHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred CC----CHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 22 234788999999999999995 5888765
No 77
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.5e-36 Score=326.34 Aligned_cols=253 Identities=21% Similarity=0.301 Sum_probs=192.1
Q ss_pred cCCCcCceecCCccceEEEEEec-CCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCC--eeE
Q 042123 588 NDFDAKYCIGNGGHASVYRAELP-SGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHAR--HSF 653 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~--~~~ 653 (849)
++|.+.+.||+|+||+||+|+.. +++.||||++..... ......+.+|+. .+++++.... ..+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 85 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF---LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKV 85 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG---GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccc---cchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEE
Confidence 57889999999999999999664 589999999875321 112334445544 3556665544 779
Q ss_pred EEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeee----cCCCcEEEeeecC
Q 042123 654 LLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLL----DLEYEAHVADFGI 729 (849)
Q Consensus 654 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill----~~~~~~kl~DfG~ 729 (849)
+||||+++|+|.+++........+++.++..++.||+.||+|||+. +|+||||||+||++ +.++.+||+|||+
T Consensus 86 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~ 162 (319)
T 4euu_A 86 LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGA 162 (319)
T ss_dssp EEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCC
Confidence 9999999999999998766555599999999999999999999999 99999999999999 7788899999999
Q ss_pred CcccCCCCCCeeeccCCcccccccccc--------CCCCCccchHHHHHHHHHHHHhCCCCCCcccccccccccccccc-
Q 042123 730 AKSLKPDSSNWTEFAGTCGYIAPELAY--------TMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVAL- 800 (849)
Q Consensus 730 a~~~~~~~~~~~~~~g~~~y~aPE~~~--------~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~- 800 (849)
++...... ......||+.|+|||++. +..++.++|||||||++|||++|+.||.................
T Consensus 163 a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 241 (319)
T 4euu_A 163 ARELEDDE-QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT 241 (319)
T ss_dssp CEECCTTC-CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHH
T ss_pred ceecCCCC-ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhc
Confidence 98775443 334567999999999876 57789999999999999999999999964322111000000000
Q ss_pred ----------c------cccCCCCCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhh
Q 042123 801 ----------D------QMLDPRLPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQL 847 (849)
Q Consensus 801 ----------~------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L 847 (849)
. ....+..+............+.+++.+||+.||++|||++|++++.
T Consensus 242 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~ 304 (319)
T 4euu_A 242 GKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAET 304 (319)
T ss_dssp HCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHH
T ss_pred CCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhcc
Confidence 0 0011122332334455666788999999999999999999999875
No 78
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=1e-36 Score=328.27 Aligned_cols=244 Identities=19% Similarity=0.267 Sum_probs=190.8
Q ss_pred cCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCc--hhhHHHHHHHHH-----------HhhceeecCCeeE
Q 042123 588 NDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQ--TVDQKEFLTEVE-----------AFYGFCSHARHSF 653 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~--~~~~~~~~~ei~-----------~~~~~~~~~~~~~ 653 (849)
+.|+..+.||+|+||.||+|.. .+|+.||||.+........ ......+.+|+. .+++++......+
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 90 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 90 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 5788999999999999999965 4699999999875432211 112344555544 3677888889999
Q ss_pred EEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCC----cEEEeeecC
Q 042123 654 LLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEY----EAHVADFGI 729 (849)
Q Consensus 654 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~----~~kl~DfG~ 729 (849)
+||||+++|+|.+++... ..+++.++..++.||+.||+|||+. +|+||||||+||+++.++ .+||+|||+
T Consensus 91 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~ 164 (326)
T 2y0a_A 91 LILELVAGGELFDFLAEK---ESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164 (326)
T ss_dssp EEEECCCSCBHHHHHTTS---SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCCTT
T ss_pred EEEEcCCCCCHHHHHHhc---CCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEECCC
Confidence 999999999999999653 3589999999999999999999999 999999999999999887 899999999
Q ss_pred CcccCCCCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCC
Q 042123 730 AKSLKPDSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLP 809 (849)
Q Consensus 730 a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 (849)
++...... ......||+.|+|||++.+..++.++||||+||++|+|++|+.||...... .....+......
T Consensus 165 a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--------~~~~~~~~~~~~ 235 (326)
T 2y0a_A 165 AHKIDFGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ--------ETLANVSAVNYE 235 (326)
T ss_dssp CEECCTTS-CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH--------HHHHHHHHTCCC
T ss_pred CeECCCCC-ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH--------HHHHHHHhcCCC
Confidence 98765432 234567999999999999889999999999999999999999999643211 111111111111
Q ss_pred CCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 810 APSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 810 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
.+..........+.+++.+||+.||++|||++|+++|
T Consensus 236 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp CCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred cCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 1111111223457899999999999999999999986
No 79
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=1.2e-36 Score=327.50 Aligned_cols=241 Identities=26% Similarity=0.463 Sum_probs=187.0
Q ss_pred cCCCcCceecCCccceEEEEEec----CCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCee
Q 042123 588 NDFDAKYCIGNGGHASVYRAELP----SGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHS 652 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~ 652 (849)
++|++.+.||+|+||.||+|... .+..||||++.... .....+.+.+|+. .+++++...+..
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 125 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY---TERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLA 125 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCC
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCC---CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCcc
Confidence 56788899999999999999763 35569999987532 2333456677755 367788888899
Q ss_pred EEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcc
Q 042123 653 FLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKS 732 (849)
Q Consensus 653 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~ 732 (849)
++||||+++|+|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 126 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 200 (325)
T 3kul_A 126 MIVTEYMENGSLDTFLRTHD--GQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRV 200 (325)
T ss_dssp EEEEECCTTCBHHHHHHTTT--TCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEE
T ss_pred EEEeeCCCCCcHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCcccc
Confidence 99999999999999996543 3589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCC---eeeccCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCC-C
Q 042123 733 LKPDSSN---WTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIK-GKHPRDFLSSISSSSLNTDVALDQMLDP-R 807 (849)
Q Consensus 733 ~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~-~ 807 (849)
....... .....+|+.|+|||++.+..++.++||||||+++|||++ |+.||...... .....+... .
T Consensus 201 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--------~~~~~~~~~~~ 272 (325)
T 3kul_A 201 LEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR--------DVISSVEEGYR 272 (325)
T ss_dssp CC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH--------HHHHHHHTTCC
T ss_pred cccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH--------HHHHHHHcCCC
Confidence 7544322 122345778999999998899999999999999999999 99999743321 111111111 1
Q ss_pred CCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 808 LPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 808 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
.+.+... ...+.+++.+||+.||++|||+++|++.|+
T Consensus 273 ~~~~~~~----~~~l~~li~~~l~~dp~~Rps~~eil~~L~ 309 (325)
T 3kul_A 273 LPAPMGC----PHALHQLMLDCWHKDRAQRPRFSQIVSVLD 309 (325)
T ss_dssp CCCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCCCc----CHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 1222222 234788999999999999999999999875
No 80
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=8.6e-37 Score=328.99 Aligned_cols=242 Identities=21% Similarity=0.330 Sum_probs=181.4
Q ss_pred hcCCCcCceecCCccceEEEEEe----cCCcEEEEEEecccCCCCchhhHHHHHHHH-----------HHhhceeecCCe
Q 042123 587 TNDFDAKYCIGNGGHASVYRAEL----PSGEVVAVKKFHSLLPCDQTVDQKEFLTEV-----------EAFYGFCSHARH 651 (849)
Q Consensus 587 ~~~f~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~ei-----------~~~~~~~~~~~~ 651 (849)
.++|+..+.||+|+||.||+|+. .+++.||+|++..............+.+|+ .++++++...+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 36899999999999999999976 478999999987542211111122233332 246788888899
Q ss_pred eEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCc
Q 042123 652 SFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAK 731 (849)
Q Consensus 652 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~ 731 (849)
.++||||+++|+|.+++... ..+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~ 169 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLERE---GIFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCK 169 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC-
T ss_pred EEEEEeCCCCCcHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCccc
Confidence 99999999999999998653 3589999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCC
Q 042123 732 SLKPDSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPAP 811 (849)
Q Consensus 732 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (849)
.............||+.|+|||.+.+..++.++||||||+++|||++|+.||..... ......+.......+
T Consensus 170 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--------~~~~~~i~~~~~~~p 241 (327)
T 3a62_A 170 ESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENR--------KKTIDKILKCKLNLP 241 (327)
T ss_dssp ---------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--------HHHHHHHHHTCCCCC
T ss_pred ccccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCH--------HHHHHHHHhCCCCCC
Confidence 654443344556799999999999998999999999999999999999999974321 112222222222222
Q ss_pred ChhhHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHhh
Q 042123 812 SRSAQEKLISIMEVAFSCFNESPESRP-----TMKIISQQ 846 (849)
Q Consensus 812 ~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~eil~~ 846 (849)
.... ..+.+++.+||+.||++|| +++|+++|
T Consensus 242 ~~~~----~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h 277 (327)
T 3a62_A 242 PYLT----QEARDLLKKLLKRNAASRLGAGPGDAGEVQAH 277 (327)
T ss_dssp TTSC----HHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred CCCC----HHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence 2222 3478899999999999999 78888875
No 81
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=6.2e-37 Score=325.05 Aligned_cols=246 Identities=24% Similarity=0.364 Sum_probs=186.3
Q ss_pred cCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeEEE
Q 042123 588 NDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSFLL 655 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~lV 655 (849)
++|+..+.||+|+||.||+|+. .+++.||+|.+..... ......+.+.+|+. .+++++...+..++|
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPR-EKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSS-CCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCcc-ccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 6799999999999999999964 5789999999865432 22333455666654 367788888999999
Q ss_pred EEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccCC
Q 042123 656 YEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLKP 735 (849)
Q Consensus 656 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~~ 735 (849)
|||+++|+|.+++... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 90 ~e~~~g~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 163 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESH---GPLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSE 163 (294)
T ss_dssp EECCCSCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC--
T ss_pred EeCCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCcccccc
Confidence 9999999999999654 3589999999999999999999999 999999999999999999999999999987654
Q ss_pred CCC-CeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCC-Ch
Q 042123 736 DSS-NWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPAP-SR 813 (849)
Q Consensus 736 ~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 813 (849)
... ......||+.|+|||.+.+..++.++||||+|+++|||++|+.||....... .....+....+.. ..
T Consensus 164 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~--------~~~~~~~~~~~~~~~~ 235 (294)
T 4eqm_A 164 TSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVS--------IAIKHIQDSVPNVTTD 235 (294)
T ss_dssp -----------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHH--------HHHHHHSSCCCCHHHH
T ss_pred ccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH--------HHHHHhhccCCCcchh
Confidence 322 2334578999999999999999999999999999999999999997433211 1111111111110 00
Q ss_pred hhHHHHHHHHHHHhhccCCCCCCCC-CHHHHHhhhc
Q 042123 814 SAQEKLISIMEVAFSCFNESPESRP-TMKIISQQLR 848 (849)
Q Consensus 814 ~~~~~~~~l~~li~~cl~~dP~~RP-t~~eil~~L~ 848 (849)
........+.+++.+||++||++|| +++++.+.|+
T Consensus 236 ~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~ 271 (294)
T 4eqm_A 236 VRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLS 271 (294)
T ss_dssp SCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHH
T ss_pred cccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHH
Confidence 1111223588899999999999998 8888887764
No 82
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=1.9e-37 Score=333.71 Aligned_cols=246 Identities=20% Similarity=0.311 Sum_probs=169.5
Q ss_pred CceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHH------HHHHhhceeecCCeeEEEEEeccCCChh
Q 042123 593 KYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLT------EVEAFYGFCSHARHSFLLYEFLERGSLA 665 (849)
Q Consensus 593 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~------ei~~~~~~~~~~~~~~lV~e~~~~gsL~ 665 (849)
.+.||+|+||.||+|.. .+++.||||++..... .....+...++ .|..+++++.+....++||||+++|+|.
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 94 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKRME-ANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELF 94 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGGGH-HHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHH
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChhhh-hhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcHH
Confidence 47899999999999965 4689999999865311 01111111111 1334778888889999999999999999
Q ss_pred hhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCC---cEEEeeecCCcccCCCCCCeee
Q 042123 666 AILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEY---EAHVADFGIAKSLKPDSSNWTE 742 (849)
Q Consensus 666 ~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~---~~kl~DfG~a~~~~~~~~~~~~ 742 (849)
+++... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||+++...........
T Consensus 95 ~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~ 168 (325)
T 3kn6_A 95 ERIKKK---KHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKT 168 (325)
T ss_dssp HHHHHC---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-------
T ss_pred HHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCcccc
Confidence 999654 3589999999999999999999999 999999999999998765 8999999999877655555566
Q ss_pred ccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCChhhHHHHHHH
Q 042123 743 FAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPAPSRSAQEKLISI 822 (849)
Q Consensus 743 ~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 822 (849)
..+|+.|+|||.+.+..++.++||||+|+++|+|++|+.||........ ..........+..+....+...+......+
T Consensus 169 ~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~ 247 (325)
T 3kn6_A 169 PCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLT-CTSAVEIMKKIKKGDFSFEGEAWKNVSQEA 247 (325)
T ss_dssp ---------------CCCCHHHHHHHHHHHHHHHHHSSCTTC--------CCCHHHHHHHHTTTCCCCCSHHHHTSCHHH
T ss_pred cCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccc-cccHHHHHHHHHcCCCCCCcccccCCCHHH
Confidence 7789999999999999999999999999999999999999975332110 111122333344444444433333445568
Q ss_pred HHHHhhccCCCCCCCCCHHHHHhh
Q 042123 823 MEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 823 ~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
.+++.+||+.||++|||++|++++
T Consensus 248 ~~li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 248 KDLIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp HHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred HHHHHHHCCCChhHCCCHHHHhcC
Confidence 899999999999999999999875
No 83
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=5.2e-37 Score=331.67 Aligned_cols=250 Identities=16% Similarity=0.225 Sum_probs=189.6
Q ss_pred cCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHHH------HHhhceeecCCeeEEEEEecc
Q 042123 588 NDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTEV------EAFYGFCSHARHSFLLYEFLE 660 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~ei------~~~~~~~~~~~~~~lV~e~~~ 660 (849)
++|+..+.||+|+||.||+|+. .+++.||||.+...........+..+++.+ ..+++++......++||||+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~- 87 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL- 87 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCSSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-
Confidence 5789999999999999999964 679999999987543333233333344443 24677888888999999999
Q ss_pred CCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCc-----EEEeeecCCcccCC
Q 042123 661 RGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYE-----AHVADFGIAKSLKP 735 (849)
Q Consensus 661 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~-----~kl~DfG~a~~~~~ 735 (849)
+|+|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||+++.+..
T Consensus 88 ~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~ 162 (330)
T 2izr_A 88 GPSLEDLFDLCD--RTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYID 162 (330)
T ss_dssp CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBC
T ss_pred CCCHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeec
Confidence 999999997542 4699999999999999999999999 9999999999999999887 99999999987644
Q ss_pred CCCC-------eeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCC
Q 042123 736 DSSN-------WTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRL 808 (849)
Q Consensus 736 ~~~~-------~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 808 (849)
.... .....||+.|+|||++.+..++.++||||||+++|||++|+.||....... .......+.....
T Consensus 163 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~-----~~~~~~~i~~~~~ 237 (330)
T 2izr_A 163 PETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADT-----LKERYQKIGDTKR 237 (330)
T ss_dssp TTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSS-----HHHHHHHHHHHHH
T ss_pred CCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCcccccccc-----HHHHHHHHHhhhc
Confidence 3221 245679999999999999999999999999999999999999997542111 0111111111111
Q ss_pred CCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 809 PAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 809 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
..+..........+.+++..||+.||.+||++++|.+.|+
T Consensus 238 ~~~~~~~~~~~p~~~~li~~~l~~~p~~RP~~~~l~~~l~ 277 (330)
T 2izr_A 238 ATPIEVLCENFPEMATYLRYVRRLDFFEKPDYDYLRKLFT 277 (330)
T ss_dssp HSCHHHHTTTCHHHHHHHHHHHHCCTTCCCCHHHHHHHHH
T ss_pred cCCHHHHhccChHHHHHHHHHHhCCCCCCCCHHHHHHHHH
Confidence 1111100000115889999999999999999999998764
No 84
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=1.4e-36 Score=318.14 Aligned_cols=240 Identities=27% Similarity=0.466 Sum_probs=189.5
Q ss_pred hcCCCcCceecCCccceEEEEEecCCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeEEE
Q 042123 587 TNDFDAKYCIGNGGHASVYRAELPSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSFLL 655 (849)
Q Consensus 587 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~lV 655 (849)
.++|+..+.||+|+||.||+|+..++..||||++..... ....+.+|+. ++++++......++|
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 81 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-----SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIV 81 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-----CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEE
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-----cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEE
Confidence 367889999999999999999988888999999875422 1234455544 367788888899999
Q ss_pred EEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccCC
Q 042123 656 YEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLKP 735 (849)
Q Consensus 656 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~~ 735 (849)
|||+++|+|.+++.... ..+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.+.....
T Consensus 82 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~ 156 (268)
T 3sxs_A 82 TEYISNGCLLNYLRSHG--KGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLD 156 (268)
T ss_dssp EECCTTCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCT
T ss_pred EEccCCCcHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecch
Confidence 99999999999996543 3589999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCC-eeeccCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCC-CCCCC
Q 042123 736 DSSN-WTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIK-GKHPRDFLSSISSSSLNTDVALDQMLDPR-LPAPS 812 (849)
Q Consensus 736 ~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 812 (849)
.... .....+++.|+|||.+.+..++.++||||+|+++|||++ |+.||+..... .......... ...+.
T Consensus 157 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~~ 228 (268)
T 3sxs_A 157 DQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS--------EVVLKVSQGHRLYRPH 228 (268)
T ss_dssp TCEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHH--------HHHHHHHTTCCCCCCT
T ss_pred hhhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChH--------HHHHHHHcCCCCCCCC
Confidence 3221 122345678999999998889999999999999999999 99999743321 1111111111 11111
Q ss_pred hhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 813 RSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 813 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
.. ...+.+++.+||+.||++|||++|++++|+
T Consensus 229 ~~----~~~l~~li~~~l~~~p~~Rps~~~ll~~L~ 260 (268)
T 3sxs_A 229 LA----SDTIYQIMYSCWHELPEKRPTFQQLLSSIE 260 (268)
T ss_dssp TS----CHHHHHHHHHTTCSSGGGSCCHHHHHHHHG
T ss_pred cC----hHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 11 124778999999999999999999999985
No 85
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=1.4e-36 Score=331.51 Aligned_cols=244 Identities=21% Similarity=0.323 Sum_probs=191.8
Q ss_pred HhcCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeE
Q 042123 586 ATNDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSF 653 (849)
Q Consensus 586 ~~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~ 653 (849)
..++|+..+.||+|+||.||+|.. .+++.||||.+..... .......+.+|+. ++++++.+.+..+
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ 104 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL--SARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHY 104 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEE
Confidence 456899999999999999999965 4689999999875422 1222344555544 3677888889999
Q ss_pred EEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCC---CcEEEeeecCC
Q 042123 654 LLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLE---YEAHVADFGIA 730 (849)
Q Consensus 654 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~---~~~kl~DfG~a 730 (849)
+||||+++|+|.+++... ..+++.++..++.||+.||+|||+. +|+||||||+||+++.+ +.+||+|||++
T Consensus 105 lv~e~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a 178 (362)
T 2bdw_A 105 LVFDLVTGGELFEDIVAR---EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA 178 (362)
T ss_dssp EEECCCCSCBHHHHHTTC---SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred EEEecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcc
Confidence 999999999999998654 3589999999999999999999999 99999999999999865 45999999999
Q ss_pred cccCCCCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCC
Q 042123 731 KSLKPDSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPA 810 (849)
Q Consensus 731 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (849)
...... .......||+.|+|||++.+..++.++||||+||++|+|++|+.||..... ......+.......
T Consensus 179 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~--------~~~~~~i~~~~~~~ 249 (362)
T 2bdw_A 179 IEVNDS-EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ--------HRLYAQIKAGAYDY 249 (362)
T ss_dssp BCCTTC-CSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHTCCCC
T ss_pred eEecCC-cccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--------HHHHHHHHhCCCCC
Confidence 876543 233456899999999999998999999999999999999999999974321 11112222222222
Q ss_pred CChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 811 PSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 811 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
+...+......+.+++.+||+.||++|||++|++++
T Consensus 250 ~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 250 PSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp CTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred CcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 222222233458899999999999999999999876
No 86
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=8.9e-37 Score=333.29 Aligned_cols=235 Identities=23% Similarity=0.291 Sum_probs=182.4
Q ss_pred cCCCcCceecCCccceEEEEEec-CCcEEEEEEecccCCCCchhhHHHHHHHH------------HHhhceeecCCeeEE
Q 042123 588 NDFDAKYCIGNGGHASVYRAELP-SGEVVAVKKFHSLLPCDQTVDQKEFLTEV------------EAFYGFCSHARHSFL 654 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~ei------------~~~~~~~~~~~~~~l 654 (849)
++|+..+.||+|+||.||+|+.. +++.||||++.+..... ......+..|. ..+++++...+..|+
T Consensus 38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~-~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILK-KKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC--------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhh-hHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 67999999999999999999664 68899999987542211 11122333332 236677888899999
Q ss_pred EEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccC
Q 042123 655 LYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLK 734 (849)
Q Consensus 655 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~ 734 (849)
||||+++|+|.+++.+. ..+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 117 v~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~~ 190 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRE---RCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENI 190 (373)
T ss_dssp EEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGGB
T ss_pred EEeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCccccccc
Confidence 99999999999998653 3589999999999999999999999 99999999999999999999999999998754
Q ss_pred CCCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCChh
Q 042123 735 PDSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPAPSRS 814 (849)
Q Consensus 735 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 814 (849)
.........+||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+.......+...
T Consensus 191 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~--------~~~~~~i~~~~~~~~~~~ 262 (373)
T 2r5t_A 191 EHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT--------AEMYDNILNKPLQLKPNI 262 (373)
T ss_dssp CCCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBH--------HHHHHHHHHSCCCCCSSS
T ss_pred cCCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH--------HHHHHHHHhcccCCCCCC
Confidence 444445667899999999999999999999999999999999999999974321 122222222222222222
Q ss_pred hHHHHHHHHHHHhhccCCCCCCCCCHH
Q 042123 815 AQEKLISIMEVAFSCFNESPESRPTMK 841 (849)
Q Consensus 815 ~~~~~~~l~~li~~cl~~dP~~RPt~~ 841 (849)
. ..+.+++.+||+.||++||++.
T Consensus 263 ~----~~~~~li~~lL~~dp~~R~~~~ 285 (373)
T 2r5t_A 263 T----NSARHLLEGLLQKDRTKRLGAK 285 (373)
T ss_dssp C----HHHHHHHHHHTCSSGGGSTTTT
T ss_pred C----HHHHHHHHHHcccCHHhCCCCC
Confidence 2 2377899999999999999974
No 87
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=1e-36 Score=324.43 Aligned_cols=250 Identities=16% Similarity=0.231 Sum_probs=188.6
Q ss_pred cCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHHH------HHhhceeecCCeeEEEEEecc
Q 042123 588 NDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTEV------EAFYGFCSHARHSFLLYEFLE 660 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~ei------~~~~~~~~~~~~~~lV~e~~~ 660 (849)
++|+..+.||+|+||.||+|.. .+++.||||++...........+....+.+ ..+++++......++||||+
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~- 88 (298)
T 1csn_A 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL- 88 (298)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec-
Confidence 5799999999999999999964 679999999986543322222222222222 23667788888999999999
Q ss_pred CCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCc-----EEEeeecCCcccCC
Q 042123 661 RGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYE-----AHVADFGIAKSLKP 735 (849)
Q Consensus 661 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~-----~kl~DfG~a~~~~~ 735 (849)
+++|.+++.... ..+++.++..++.||+.||+|||+. +|+||||||+||+++.++. +||+|||+++....
T Consensus 89 ~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~ 163 (298)
T 1csn_A 89 GPSLEDLLDLCG--RKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRD 163 (298)
T ss_dssp CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBC
T ss_pred CCCHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECcccccccc
Confidence 999999997543 3589999999999999999999998 9999999999999987776 99999999987654
Q ss_pred CCC-------CeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCC
Q 042123 736 DSS-------NWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRL 808 (849)
Q Consensus 736 ~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 808 (849)
... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||........ ......+.....
T Consensus 164 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~-----~~~~~~~~~~~~ 238 (298)
T 1csn_A 164 PVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATN-----KQKYERIGEKKQ 238 (298)
T ss_dssp TTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCH-----HHHHHHHHHHHH
T ss_pred ccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhcccc-----HHHHHHHHhhcc
Confidence 322 13445789999999999999999999999999999999999999975432111 011111100000
Q ss_pred CCC-ChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 809 PAP-SRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 809 ~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
..+ ..........+.+++.+||+.||++|||+++|++.|+
T Consensus 239 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~ 279 (298)
T 1csn_A 239 STPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFS 279 (298)
T ss_dssp HSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHH
T ss_pred CccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHH
Confidence 000 0000112235889999999999999999999998874
No 88
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=6.1e-36 Score=320.07 Aligned_cols=252 Identities=19% Similarity=0.258 Sum_probs=185.8
Q ss_pred hcCCCcCceecCCccceEEEEEecCCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeEEE
Q 042123 587 TNDFDAKYCIGNGGHASVYRAELPSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSFLL 655 (849)
Q Consensus 587 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~lV 655 (849)
.++|+..+.||+|+||+||+|+..+|+.||||++..... .......+.+|+. ++++++......++|
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 97 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAE--DEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLV 97 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC--------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccc--cchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEE
Confidence 368999999999999999999888899999999865422 1222344455544 367788888899999
Q ss_pred EEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccCC
Q 042123 656 YEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLKP 735 (849)
Q Consensus 656 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~~ 735 (849)
|||+++ +|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 98 ~e~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~ 171 (311)
T 3niz_A 98 FEFMEK-DLKKVLDENK--TGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGI 171 (311)
T ss_dssp EECCSE-EHHHHHHTCT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETTS
T ss_pred EcCCCC-CHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecCC
Confidence 999985 8888876543 3589999999999999999999999 999999999999999999999999999987765
Q ss_pred CCCCeeeccCCccccccccccC-CCCCccchHHHHHHHHHHHHhCCCCCCccccccccc-------------cccccccc
Q 042123 736 DSSNWTEFAGTCGYIAPELAYT-MKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSS-------------LNTDVALD 801 (849)
Q Consensus 736 ~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~-------------~~~~~~~~ 801 (849)
.........+|+.|+|||.+.+ ..++.++||||+||++|+|++|+.||.......... ........
T Consensus 172 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 251 (311)
T 3niz_A 172 PVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELP 251 (311)
T ss_dssp CCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSH
T ss_pred CcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccc
Confidence 5444556678999999999876 568999999999999999999999997533211100 00000000
Q ss_pred cccCCCCCCCCh-----hhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 802 QMLDPRLPAPSR-----SAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 802 ~~~~~~~~~~~~-----~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
.+.+........ .......++.+++.+||+.||++|||++|+++|
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 301 (311)
T 3niz_A 252 LWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301 (311)
T ss_dssp HHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 000000000000 001112357899999999999999999999986
No 89
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=1.1e-36 Score=327.64 Aligned_cols=252 Identities=25% Similarity=0.382 Sum_probs=185.8
Q ss_pred hcCCCcCceecCCccceEEEEEecCCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCC----e
Q 042123 587 TNDFDAKYCIGNGGHASVYRAELPSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHAR----H 651 (849)
Q Consensus 587 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~----~ 651 (849)
.++|+..+.||+|+||+||+|+.. ++.||||++... .........|+. ++++++.... .
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~-----~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 96 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQ-----DKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVD 96 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGG-----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecC-----chHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCce
Confidence 368899999999999999999875 899999998643 112223333443 3566665533 4
Q ss_pred eEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcC-------CCCeEecCCCCCCeeecCCCcEEE
Q 042123 652 SFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDC-------FPPIVHRDISSKNLLLDLEYEAHV 724 (849)
Q Consensus 652 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~-------~~~ivH~dlk~~Nill~~~~~~kl 724 (849)
.++||||+++|+|.+++... .+++.++..++.|++.||+|||+.. .++|+||||||+||+++.++.+||
T Consensus 97 ~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL 172 (322)
T 3soc_A 97 LWLITAFHEKGSLSDFLKAN----VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACI 172 (322)
T ss_dssp EEEEEECCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEE
T ss_pred EEEEEecCCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEE
Confidence 69999999999999999643 4899999999999999999999851 237999999999999999999999
Q ss_pred eeecCCcccCCCCCC--eeeccCCccccccccccC-----CCCCccchHHHHHHHHHHHHhCCCCCCcccccccccc---
Q 042123 725 ADFGIAKSLKPDSSN--WTEFAGTCGYIAPELAYT-----MKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSL--- 794 (849)
Q Consensus 725 ~DfG~a~~~~~~~~~--~~~~~g~~~y~aPE~~~~-----~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~--- 794 (849)
+|||+++........ .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||...........
T Consensus 173 ~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~ 252 (322)
T 3soc_A 173 ADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEE 252 (322)
T ss_dssp CCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHH
T ss_pred ccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhh
Confidence 999999876543321 233578999999999876 3566789999999999999999999975332111000
Q ss_pred -----ccccccccccCCCCCCC-Ch--hhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 795 -----NTDVALDQMLDPRLPAP-SR--SAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 795 -----~~~~~~~~~~~~~~~~~-~~--~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
...............+. .. ........+.+++.+||+.||++|||++||++.|+
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~ 314 (322)
T 3soc_A 253 IGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERIT 314 (322)
T ss_dssp HCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred hccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 00111111111111111 11 11234456889999999999999999999999875
No 90
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.4e-36 Score=326.96 Aligned_cols=238 Identities=20% Similarity=0.281 Sum_probs=185.9
Q ss_pred cCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeEEE
Q 042123 588 NDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSFLL 655 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~lV 655 (849)
++|.+.+.||+|+||.||+|.. .+++.||||++...... .......+.+|+. .+++++......++|
T Consensus 9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLK-KSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHH-HTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHcc-chhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 6899999999999999999965 67999999998642111 1111233445543 467888888999999
Q ss_pred EEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccCC
Q 042123 656 YEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLKP 735 (849)
Q Consensus 656 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~~ 735 (849)
|||+ +|+|.+++... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 88 ~E~~-~g~l~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~ 160 (336)
T 3h4j_B 88 IEYA-GGELFDYIVEK---KRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTD 160 (336)
T ss_dssp ECCC-CEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTT
T ss_pred EECC-CCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceeccC
Confidence 9999 67898888643 3589999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCeeeccCCccccccccccCCCC-CccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCChh
Q 042123 736 DSSNWTEFAGTCGYIAPELAYTMKI-TEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPAPSRS 814 (849)
Q Consensus 736 ~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 814 (849)
.. ......||+.|+|||.+.+..+ ++++||||+||++|+|++|+.||+..... .....+.......+...
T Consensus 161 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~--------~~~~~i~~~~~~~p~~~ 231 (336)
T 3h4j_B 161 GN-FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIP--------NLFKKVNSCVYVMPDFL 231 (336)
T ss_dssp SB-TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSST--------TCBCCCCSSCCCCCTTS
T ss_pred Cc-ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHH--------HHHHHHHcCCCCCcccC
Confidence 32 3345679999999999988776 68999999999999999999999743211 11111111111112112
Q ss_pred hHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 815 AQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 815 ~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
...+.+++.+||+.||.+|||++|++++
T Consensus 232 ----s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 232 ----SPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp ----CHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred ----CHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 2247789999999999999999999875
No 91
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=1.9e-36 Score=322.15 Aligned_cols=252 Identities=17% Similarity=0.261 Sum_probs=184.4
Q ss_pred HhcCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHHHH------HhhceeecCCeeEEEEEe
Q 042123 586 ATNDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE------AFYGFCSHARHSFLLYEF 658 (849)
Q Consensus 586 ~~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~------~~~~~~~~~~~~~lV~e~ 658 (849)
..++|+..+.||+|+||.||+|+. .+++.||||.+...........+....+.+. .+..++......++||||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 86 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL 86 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEc
Confidence 457899999999999999999965 6789999998765433332222333333322 133445677888999999
Q ss_pred ccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeee---cCCCcEEEeeecCCcccCC
Q 042123 659 LERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLL---DLEYEAHVADFGIAKSLKP 735 (849)
Q Consensus 659 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~DfG~a~~~~~ 735 (849)
+ +|+|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++....
T Consensus 87 ~-~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~ 160 (296)
T 4hgt_A 87 L-GPSLEDLFNFCS--RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp C-CCBHHHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred c-CCCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccceeccC
Confidence 9 999999986432 3589999999999999999999999 99999999999999 7889999999999987654
Q ss_pred CCC-------CeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCC
Q 042123 736 DSS-------NWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRL 808 (849)
Q Consensus 736 ~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 808 (849)
... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||.......... ..........
T Consensus 161 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~-----~~~~~~~~~~ 235 (296)
T 4hgt_A 161 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQ-----KYERISEKKM 235 (296)
T ss_dssp TTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSS-----HHHHHHHHHH
T ss_pred cccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhh-----hhhhhhcccc
Confidence 322 1234578999999999999999999999999999999999999997543221111 1111111010
Q ss_pred CCCC-hhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 809 PAPS-RSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 809 ~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
..+. .........+.+++.+||+.||++|||+++|++.|+
T Consensus 236 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (296)
T 4hgt_A 236 STPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFR 276 (296)
T ss_dssp HSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHH
T ss_pred cchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHH
Confidence 0000 000011235889999999999999999999998874
No 92
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.5e-36 Score=323.11 Aligned_cols=240 Identities=20% Similarity=0.313 Sum_probs=180.7
Q ss_pred cCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCc----------------------hhhHHHHHHHHH----
Q 042123 588 NDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQ----------------------TVDQKEFLTEVE---- 640 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~----------------------~~~~~~~~~ei~---- 640 (849)
++|+..+.||+|+||.||+|.. .+++.||||++........ ......+.+|+.
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 92 (298)
T 2zv2_A 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKK 92 (298)
T ss_dssp TTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHT
T ss_pred cceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHh
Confidence 6899999999999999999965 5789999999865321110 011233455544
Q ss_pred -------Hhhceeec--CCeeEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCC
Q 042123 641 -------AFYGFCSH--ARHSFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISS 711 (849)
Q Consensus 641 -------~~~~~~~~--~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~ 711 (849)
++++++.. ....++||||+++|+|.+++.. ..+++.++..++.||+.||+|||+. +|+||||||
T Consensus 93 l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp 165 (298)
T 2zv2_A 93 LDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL----KPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKP 165 (298)
T ss_dssp CCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCG
T ss_pred CCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCH
Confidence 35666655 5688999999999999887643 3589999999999999999999999 999999999
Q ss_pred CCeeecCCCcEEEeeecCCcccCCCCCCeeeccCCccccccccccCCC---CCccchHHHHHHHHHHHHhCCCCCCcccc
Q 042123 712 KNLLLDLEYEAHVADFGIAKSLKPDSSNWTEFAGTCGYIAPELAYTMK---ITEKCDVYSFGVLMWEVIKGKHPRDFLSS 788 (849)
Q Consensus 712 ~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~---~~~~~Dv~SlGvil~el~tg~~Pf~~~~~ 788 (849)
+||+++.++.+||+|||+++.............||+.|+|||.+.+.. ++.++||||||+++|||++|+.||.....
T Consensus 166 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~ 245 (298)
T 2zv2_A 166 SNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERI 245 (298)
T ss_dssp GGEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred HHEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccH
Confidence 999999999999999999987765444445568999999999987655 37789999999999999999999974321
Q ss_pred ccccccccccccccccCCC--CCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 789 ISSSSLNTDVALDQMLDPR--LPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
.. ....+.... .+..... ...+.+++.+||+.||++|||++|+++|
T Consensus 246 ~~--------~~~~~~~~~~~~~~~~~~----~~~l~~li~~~l~~dp~~R~s~~e~l~h 293 (298)
T 2zv2_A 246 MC--------LHSKIKSQALEFPDQPDI----AEDLKDLITRMLDKNPESRIVVPEIKLH 293 (298)
T ss_dssp HH--------HHHHHHHCCCCCCSSSCC----CHHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred HH--------HHHHHhcccCCCCCcccc----CHHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence 11 111111111 1111111 2247889999999999999999999876
No 93
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=2.6e-37 Score=334.33 Aligned_cols=248 Identities=19% Similarity=0.293 Sum_probs=191.4
Q ss_pred HhcCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHH------HHHhhceeecCCeeEEEEEe
Q 042123 586 ATNDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTE------VEAFYGFCSHARHSFLLYEF 658 (849)
Q Consensus 586 ~~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e------i~~~~~~~~~~~~~~lV~e~ 658 (849)
..++|+..+.||+|+||.||+|.. .+++.||||.+....... ..+.+.+.. +..+++++.+....|+||||
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~--~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~ 97 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDP--TEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTEL 97 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCCC--HHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECC
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCCh--HHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeC
Confidence 346799999999999999999965 468999999997643221 122222222 34578888899999999999
Q ss_pred ccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCC----CcEEEeeecCCcccC
Q 042123 659 LERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLE----YEAHVADFGIAKSLK 734 (849)
Q Consensus 659 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~----~~~kl~DfG~a~~~~ 734 (849)
+++|+|.+++... ..+++.++..++.||+.||+|||+. +|+||||||+||++..+ +.+||+|||+++...
T Consensus 98 ~~gg~L~~~i~~~---~~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~ 171 (342)
T 2qr7_A 98 MKGGELLDKILRQ---KFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLR 171 (342)
T ss_dssp CCSCBHHHHHHTC---TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECB
T ss_pred CCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCc
Confidence 9999999998654 3489999999999999999999999 99999999999998543 359999999998776
Q ss_pred CCCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCChh
Q 042123 735 PDSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPAPSRS 814 (849)
Q Consensus 735 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 814 (849)
..........||+.|+|||++.+..++.++||||+||++|||++|+.||...... ........+..+....+...
T Consensus 172 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-----~~~~~~~~i~~~~~~~~~~~ 246 (342)
T 2qr7_A 172 AENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDD-----TPEEILARIGSGKFSLSGGY 246 (342)
T ss_dssp CTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTS-----CHHHHHHHHHHCCCCCCSTT
T ss_pred CCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcC-----CHHHHHHHHccCCcccCccc
Confidence 5544455678999999999998888999999999999999999999999743211 11122222222222222212
Q ss_pred hHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 815 AQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 815 ~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
+......+.+++.+||+.||++|||++++++|
T Consensus 247 ~~~~s~~~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 247 WNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp TTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred cccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 22233457889999999999999999999876
No 94
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.3e-36 Score=323.42 Aligned_cols=236 Identities=22% Similarity=0.243 Sum_probs=181.7
Q ss_pred cCCCcCceecCCccceEEEEEec-CCcEEEEEEecccCCCCchhhHHHHHHHHH------------HhhceeecCCeeEE
Q 042123 588 NDFDAKYCIGNGGHASVYRAELP-SGEVVAVKKFHSLLPCDQTVDQKEFLTEVE------------AFYGFCSHARHSFL 654 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~ei~------------~~~~~~~~~~~~~l 654 (849)
++|+..++||+|+||+||+|+.. +++.||||++..... ..........|+. .+++++.+.+..++
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~l 134 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFR--GPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYL 134 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCC--SHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEeccccc--ChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEE
Confidence 57999999999999999999665 799999999765322 1222233333322 36788888999999
Q ss_pred EEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccC
Q 042123 655 LYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLK 734 (849)
Q Consensus 655 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~ 734 (849)
||||+ +++|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 135 v~e~~-~~~L~~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~ 208 (311)
T 3p1a_A 135 QTELC-GPSLQQHCEAWG--ASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELG 208 (311)
T ss_dssp EEECC-CCBHHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEECC
T ss_pred EEecc-CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeecc
Confidence 99999 669999886543 4599999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCChh
Q 042123 735 PDSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPAPSRS 814 (849)
Q Consensus 735 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 814 (849)
... ......||+.|+|||++.+ .++.++|||||||++|||++|..|+..... ...+.....+ ...
T Consensus 209 ~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~-----------~~~~~~~~~~--~~~ 273 (311)
T 3p1a_A 209 TAG-AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEG-----------WQQLRQGYLP--PEF 273 (311)
T ss_dssp -------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHH-----------HHHHTTTCCC--HHH
T ss_pred cCC-CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccH-----------HHHHhccCCC--ccc
Confidence 432 2344568999999998876 789999999999999999999776542211 1111111111 111
Q ss_pred hHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 815 AQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 815 ~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
.......+.+++.+||+.||++|||++|++++
T Consensus 274 ~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 305 (311)
T 3p1a_A 274 TAGLSSELRSVLVMMLEPDPKLRATAEALLAL 305 (311)
T ss_dssp HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ccCCCHHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence 11223458899999999999999999999986
No 95
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.4e-36 Score=318.32 Aligned_cols=239 Identities=27% Similarity=0.456 Sum_probs=189.4
Q ss_pred cCCCcCceecCCccceEEEEEecCCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeEEEE
Q 042123 588 NDFDAKYCIGNGGHASVYRAELPSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSFLLY 656 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~lV~ 656 (849)
++|+..+.||+|+||.||+|...+++.||||++..... ..+.+.+|+. ++++++.+....++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 84 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-----SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVF 84 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-----CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEE
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc-----CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEE
Confidence 67888999999999999999888899999999875422 1234555544 3677888888999999
Q ss_pred EeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccCCC
Q 042123 657 EFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLKPD 736 (849)
Q Consensus 657 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~ 736 (849)
||+++|+|.+++.... ..+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 85 e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 159 (269)
T 4hcu_A 85 EFMEHGCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 159 (269)
T ss_dssp ECCTTCBHHHHHHTTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCH
T ss_pred EeCCCCcHHHHHHhcC--cccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEecccccccccccc
Confidence 9999999999996543 3589999999999999999999999 9999999999999999999999999999866432
Q ss_pred C-CCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCC-CCCCCCh
Q 042123 737 S-SNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIK-GKHPRDFLSSISSSSLNTDVALDQMLDP-RLPAPSR 813 (849)
Q Consensus 737 ~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 813 (849)
. .......+++.|+|||.+.+..++.++||||+|+++|+|++ |+.||...... .....+... ....+..
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~~~ 231 (269)
T 4hcu_A 160 QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS--------EVVEDISTGFRLYKPRL 231 (269)
T ss_dssp HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--------HHHHHHHTTCCCCCCTT
T ss_pred ccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH--------HHHHHHhcCccCCCCCc
Confidence 1 11223456778999999998999999999999999999999 99999743321 111111111 1111111
Q ss_pred hhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 814 SAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 814 ~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
. ...+.+++.+||+.||++|||+++++++|+
T Consensus 232 ~----~~~~~~li~~~l~~~p~~Rps~~~ll~~l~ 262 (269)
T 4hcu_A 232 A----STHVYQIMNHCWRERPEDRPAFSRLLRQLA 262 (269)
T ss_dssp S----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred C----CHHHHHHHHHHccCCcccCcCHHHHHHHHH
Confidence 1 234788999999999999999999999885
No 96
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=1.6e-36 Score=332.52 Aligned_cols=241 Identities=23% Similarity=0.454 Sum_probs=178.4
Q ss_pred cCCCcCceecCCccceEEEEEec----CCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCee
Q 042123 588 NDFDAKYCIGNGGHASVYRAELP----SGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHS 652 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~ 652 (849)
++|+..+.||+|+||.||+|+.. ++..||||++.... .....+.+.+|+. ++++++......
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 121 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY---TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV 121 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc---CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCce
Confidence 57889999999999999999764 57789999986532 2233456777755 367888888899
Q ss_pred EEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcc
Q 042123 653 FLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKS 732 (849)
Q Consensus 653 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~ 732 (849)
++||||+++|+|.+++.... ..+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 122 ~lv~e~~~~~sL~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 196 (373)
T 2qol_A 122 MIVTEYMENGSLDSFLRKHD--AQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRV 196 (373)
T ss_dssp EEEEECCTTCBHHHHHHTTT--TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-----
T ss_pred EEEEeCCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCccccc
Confidence 99999999999999997543 3589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCC---eeeccCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCC-C
Q 042123 733 LKPDSSN---WTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIK-GKHPRDFLSSISSSSLNTDVALDQMLDP-R 807 (849)
Q Consensus 733 ~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~-~ 807 (849)
....... .....+++.|+|||++.+..++.++||||||+++|||++ |+.||...... .....+... +
T Consensus 197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~--------~~~~~i~~~~~ 268 (373)
T 2qol_A 197 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ--------DVIKAVDEGYR 268 (373)
T ss_dssp -----------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH--------HHHHHHHTTEE
T ss_pred cccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHcCCC
Confidence 6543221 112234678999999999999999999999999999998 99999743321 111111111 1
Q ss_pred CCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 808 LPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 808 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
.+.+... ...+.+++.+||+.||++|||+++|++.|+
T Consensus 269 ~~~~~~~----~~~l~~li~~cl~~dp~~RPs~~~i~~~L~ 305 (373)
T 2qol_A 269 LPPPMDC----PAALYQLMLDCWQKDRNNRPKFEQIVSILD 305 (373)
T ss_dssp CCCCTTC----BHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCccc----cHHHHHHHHHHhCcChhhCcCHHHHHHHHH
Confidence 1111122 234788999999999999999999998874
No 97
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=8.5e-37 Score=335.78 Aligned_cols=242 Identities=24% Similarity=0.446 Sum_probs=187.7
Q ss_pred hcCCCcCceecCCccceEEEEEec-CCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeEE
Q 042123 587 TNDFDAKYCIGNGGHASVYRAELP-SGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSFL 654 (849)
Q Consensus 587 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~l 654 (849)
.++|...+.||+|+||.||+|++. +++.||||.+..... ......+.+|+. ++++++...+..++
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 189 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLP---PDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYI 189 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSC---HHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCC---HHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEE
Confidence 467888999999999999999775 789999999865321 122233444443 47788888889999
Q ss_pred EEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccC
Q 042123 655 LYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLK 734 (849)
Q Consensus 655 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~ 734 (849)
||||+++|+|.+++.... ..+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 190 v~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~ 264 (377)
T 3cbl_A 190 VMELVQGGDFLTFLRTEG--ARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEA 264 (377)
T ss_dssp EEECCTTCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECT
T ss_pred EEEcCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecC
Confidence 999999999999996533 3589999999999999999999999 99999999999999999999999999998654
Q ss_pred CCCCC--eeeccCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccC-CCCCC
Q 042123 735 PDSSN--WTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIK-GKHPRDFLSSISSSSLNTDVALDQMLD-PRLPA 810 (849)
Q Consensus 735 ~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 810 (849)
..... .....+++.|+|||.+.+..++.++|||||||++|||++ |..||....... ....+.. .+.+.
T Consensus 265 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~--------~~~~~~~~~~~~~ 336 (377)
T 3cbl_A 265 DGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQ--------TREFVEKGGRLPC 336 (377)
T ss_dssp TSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHH--------HHHHHHTTCCCCC
T ss_pred CCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--------HHHHHHcCCCCCC
Confidence 32111 111234678999999998899999999999999999998 999987543211 1111111 12222
Q ss_pred CChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 811 PSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 811 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
+...+ ..+.+++.+||+.||++|||+++|++.|+
T Consensus 337 ~~~~~----~~l~~li~~cl~~dP~~Rps~~~i~~~L~ 370 (377)
T 3cbl_A 337 PELCP----DAVFRLMEQCWAYEPGQRPSFSTIYQELQ 370 (377)
T ss_dssp CTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCC----HHHHHHHHHHcCCCchhCcCHHHHHHHHH
Confidence 22222 24778999999999999999999999874
No 98
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=1.2e-36 Score=330.67 Aligned_cols=240 Identities=22% Similarity=0.292 Sum_probs=176.3
Q ss_pred hcCCCcCceecCCccceEEEEEec-CCcEEEEEEecccCCCCchhhHHHHHHH-----------HHHhhceeecCCeeEE
Q 042123 587 TNDFDAKYCIGNGGHASVYRAELP-SGEVVAVKKFHSLLPCDQTVDQKEFLTE-----------VEAFYGFCSHARHSFL 654 (849)
Q Consensus 587 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e-----------i~~~~~~~~~~~~~~l 654 (849)
.+.|+..+.||+|+||.||+|+.. +++.||||++..... .+.+.+| +.++++++......++
T Consensus 52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 125 (349)
T 2w4o_A 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVD------KKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISL 125 (349)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC----------------CHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccchh------HHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEE
Confidence 467899999999999999999665 688999999875421 1223333 3347788888899999
Q ss_pred EEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecC---CCcEEEeeecCCc
Q 042123 655 LYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDL---EYEAHVADFGIAK 731 (849)
Q Consensus 655 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~DfG~a~ 731 (849)
||||+++|+|.+++... ..+++.++..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+++
T Consensus 126 v~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~ 199 (349)
T 2w4o_A 126 VLELVTGGELFDRIVEK---GYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSK 199 (349)
T ss_dssp EECCCCSCBHHHHHTTC---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC---
T ss_pred EEEeCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCcccc
Confidence 99999999999998654 3489999999999999999999999 9999999999999975 7899999999998
Q ss_pred ccCCCCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCC
Q 042123 732 SLKPDSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPAP 811 (849)
Q Consensus 732 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (849)
..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ......+........
T Consensus 200 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-------~~~~~~i~~~~~~~~ 271 (349)
T 2w4o_A 200 IVEHQ-VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGD-------QFMFRRILNCEYYFI 271 (349)
T ss_dssp --------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCH-------HHHHHHHHTTCCCCC
T ss_pred ccCcc-cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCccc-------HHHHHHHHhCCCccC
Confidence 66433 2234567899999999999999999999999999999999999999643211 111222222222111
Q ss_pred ChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 812 SRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 812 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
..........+.+++.+||+.||++|||++|++++
T Consensus 272 ~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 272 SPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp TTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred CchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 11112223457899999999999999999999986
No 99
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=3e-36 Score=322.56 Aligned_cols=237 Identities=23% Similarity=0.345 Sum_probs=187.5
Q ss_pred cCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHHH-----------HHhhceeecCCeeEEE
Q 042123 588 NDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTEV-----------EAFYGFCSHARHSFLL 655 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~ei-----------~~~~~~~~~~~~~~lV 655 (849)
++|+..+.||+|+||.||+|+. .+|+.||+|.+...... .......+.+|+ .++++++.+....++|
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVV-RLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 6789999999999999999965 47999999998653110 011122333333 2467788888999999
Q ss_pred EEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccCC
Q 042123 656 YEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLKP 735 (849)
Q Consensus 656 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~~ 735 (849)
|||+++|+|.+++... ..+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 85 ~e~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~ 158 (318)
T 1fot_A 85 MDYIEGGELFSLLRKS---QRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPD 158 (318)
T ss_dssp ECCCCSCBHHHHHHHT---SSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSS
T ss_pred EeCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecCC
Confidence 9999999999999653 3589999999999999999999999 999999999999999999999999999987543
Q ss_pred CCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCChhh
Q 042123 736 DSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPAPSRSA 815 (849)
Q Consensus 736 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 815 (849)
. .....||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+.......+....
T Consensus 159 ~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--------~~~~~~i~~~~~~~p~~~~ 227 (318)
T 1fot_A 159 V---TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT--------MKTYEKILNAELRFPPFFN 227 (318)
T ss_dssp C---BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH--------HHHHHHHHHCCCCCCTTSC
T ss_pred c---cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhCCCCCCCCCC
Confidence 2 2346799999999999999999999999999999999999999974321 1122222222222222222
Q ss_pred HHHHHHHHHHHhhccCCCCCCCC-----CHHHHHhh
Q 042123 816 QEKLISIMEVAFSCFNESPESRP-----TMKIISQQ 846 (849)
Q Consensus 816 ~~~~~~l~~li~~cl~~dP~~RP-----t~~eil~~ 846 (849)
..+.+++.+|++.||++|| +++|+++|
T Consensus 228 ----~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h 259 (318)
T 1fot_A 228 ----EDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 259 (318)
T ss_dssp ----HHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred ----HHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence 2477899999999999999 89999875
No 100
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=2.4e-35 Score=326.48 Aligned_cols=311 Identities=21% Similarity=0.193 Sum_probs=202.1
Q ss_pred CCCCCCEEeCcCCccccCCCccccCCCCCCEeeCCCCcCcccccccccccCCCCCccccCeEeccCCcccccCCccCCCC
Q 042123 28 SFPHLAYLDLTWNGFFGTIPPQISNLSNLRYLYLGSNQFSGNILAEVSSESSGGNLRYMSRLVINDNSLSGFIPPHIGNL 107 (849)
Q Consensus 28 ~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 107 (849)
.++++++|++++|.+..+++..|..+++|++|+|++|++++ .....|+.+++|++|+|++|.+++..|..|+++
T Consensus 43 ~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~------~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 116 (390)
T 3o6n_A 43 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEE------IDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNV 116 (390)
T ss_dssp GGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCE------ECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred ccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccc------cChhhccCCCCcCEEECCCCCCCcCCHHHhcCC
Confidence 35788888898888888877778888888888888888763 122344555555555555555555555555555
Q ss_pred CCCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEEcCCCcccccCCcCCCCCCCCCEEEc
Q 042123 108 KFLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLNDNQLIGYIPRPFSNLTSVSTLRL 187 (849)
Q Consensus 108 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 187 (849)
++|++|+|++|+++++.+..|.++++|++|++++|.+++..+..|.++++|++|++++|+++++ .+..+++|++|++
T Consensus 117 ~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l 193 (390)
T 3o6n_A 117 PLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANV 193 (390)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEEC
T ss_pred CCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeec
Confidence 5555555555555544444455555555555555555544444455555555555555555443 1333444455555
Q ss_pred cCCCCcCcCcccccCCCCCCEEeccCCcCccCCCcCccCccccchhhhccccccCCCCcchhhhhhhhhhccCcCCCCCC
Q 042123 188 SRNDLFGSIPDEIGKMRSLSVLDLNQNQFKGVLPPSISNLTNLKELALLYNHLSGSIPPSLGNLILRQLLLSGNHFTGYL 267 (849)
Q Consensus 188 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~L~~n~i~~~~ 267 (849)
++|.+.+ +...++|++|++++|.+... |..
T Consensus 194 ~~n~l~~-----~~~~~~L~~L~l~~n~l~~~-~~~-------------------------------------------- 223 (390)
T 3o6n_A 194 SYNLLST-----LAIPIAVEELDASHNSINVV-RGP-------------------------------------------- 223 (390)
T ss_dssp CSSCCSE-----EECCSSCSEEECCSSCCCEE-ECC--------------------------------------------
T ss_pred ccccccc-----cCCCCcceEEECCCCeeeec-ccc--------------------------------------------
Confidence 5544431 12223444444444444322 110
Q ss_pred CcccCCCCCcceeeecccccccccCCCCCCcccccEEEccCccccCchhhhhCCCCCCCEEeccCccccCcccccCCCCC
Q 042123 268 PYNICRGGALEIFTVSENHFQGTIPTSLRNCTSLIRVRLNGNNLTGNISEALGIYPNLTFIDLSRNNFYGEISSNWGKFP 347 (849)
Q Consensus 268 ~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 347 (849)
..++|+.|++++|.+++. ..+..+++|++|++++|.+++..+..+..+++|+.|+|++|++.+ ++..+..++
T Consensus 224 -----~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~ 295 (390)
T 3o6n_A 224 -----VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIP 295 (390)
T ss_dssp -----CCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCT
T ss_pred -----ccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCC
Confidence 013455555555555532 356677888888888888888778888888888888888888874 455667788
Q ss_pred CCcEEeccCCccccCCCCCccccccccccccccccccccCchhhcCCCCCcEEEccCccccc
Q 042123 348 KLGTLNVSMNNITGGLPREIGNSSQLQAFDLSLNHIVGEIPKELGKLNPLTKLILRGNQITG 409 (849)
Q Consensus 348 ~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~ 409 (849)
+|++|++++|.++ .+|..+..+++|+.|+|++|+++.. + +..+++|+.|++++|++..
T Consensus 296 ~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~-~--~~~~~~L~~L~l~~N~~~~ 353 (390)
T 3o6n_A 296 TLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDC 353 (390)
T ss_dssp TCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEH
T ss_pred CCCEEECCCCcce-ecCccccccCcCCEEECCCCcccee-C--chhhccCCEEEcCCCCccc
Confidence 8999999999888 5677788888999999999998754 3 7788899999999999874
No 101
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=9.2e-37 Score=320.06 Aligned_cols=243 Identities=28% Similarity=0.470 Sum_probs=176.8
Q ss_pred hcCCCcCceecCCccceEEEEEecCCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeEEE
Q 042123 587 TNDFDAKYCIGNGGHASVYRAELPSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSFLL 655 (849)
Q Consensus 587 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~lV 655 (849)
.++|+..+.||+|+||.||+|.+. ++.||||.+............+.+.+|+. .+++++...+..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 367889999999999999999875 89999999865433222222344555544 367788888899999
Q ss_pred EEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecC--------CCcEEEeee
Q 042123 656 YEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDL--------EYEAHVADF 727 (849)
Q Consensus 656 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~--------~~~~kl~Df 727 (849)
|||+++++|.+++.. ..+++.++..++.|++.|++|||+...++|+||||||+||+++. ++.+||+||
T Consensus 85 ~e~~~~~~L~~~~~~----~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Df 160 (271)
T 3dtc_A 85 MEFARGGPLNRVLSG----KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDF 160 (271)
T ss_dssp EECCTTEEHHHHHTS----SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCC
T ss_pred EEcCCCCCHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccC
Confidence 999999999999853 35899999999999999999999982222999999999999986 678999999
Q ss_pred cCCcccCCCCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCC
Q 042123 728 GIAKSLKPDSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPR 807 (849)
Q Consensus 728 G~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 807 (849)
|++....... .....|++.|+|||.+.+..++.++||||+|+++|+|++|+.||....... .........
T Consensus 161 g~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--------~~~~~~~~~ 230 (271)
T 3dtc_A 161 GLAREWHRTT--KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLA--------VAYGVAMNK 230 (271)
T ss_dssp CC---------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHH--------HHHHHHTSC
T ss_pred Cccccccccc--ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--------HHHhhhcCC
Confidence 9998665432 234578999999999999899999999999999999999999997433211 111111111
Q ss_pred --CCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 808 --LPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 808 --~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
.+.+... ...+.+++.+||+.||++|||+.|++++|+
T Consensus 231 ~~~~~~~~~----~~~~~~li~~~l~~~p~~Rps~~e~l~~L~ 269 (271)
T 3dtc_A 231 LALPIPSTC----PEPFAKLMEDCWNPDPHSRPSFTNILDQLT 269 (271)
T ss_dssp CCCCCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCCCccc----CHHHHHHHHHHhcCCcccCcCHHHHHHHHh
Confidence 1111111 234788999999999999999999999985
No 102
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=3.9e-36 Score=329.95 Aligned_cols=241 Identities=19% Similarity=0.288 Sum_probs=189.6
Q ss_pred cCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeEEE
Q 042123 588 NDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSFLL 655 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~lV 655 (849)
+.|+..+.||+|+||.||+|.. .+|+.||+|.+.... ......+.+|+. .+++++......++|
T Consensus 51 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~----~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 126 (387)
T 1kob_A 51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY----PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLI 126 (387)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS----HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEE
T ss_pred cceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccc----hhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEE
Confidence 6799999999999999999965 478999999986532 222345556654 367788888999999
Q ss_pred EEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecC--CCcEEEeeecCCccc
Q 042123 656 YEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDL--EYEAHVADFGIAKSL 733 (849)
Q Consensus 656 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~--~~~~kl~DfG~a~~~ 733 (849)
|||+++|+|.+++.... ..+++.++..++.||+.||+|||+. +|+||||||+||+++. ++.+||+|||+++..
T Consensus 127 ~E~~~gg~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~ 201 (387)
T 1kob_A 127 LEFLSGGELFDRIAAED--YKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKL 201 (387)
T ss_dssp EECCCCCBHHHHTTCTT--CCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEEC
T ss_pred EEcCCCCcHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceec
Confidence 99999999999986543 3589999999999999999999999 9999999999999974 478999999999877
Q ss_pred CCCCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCh
Q 042123 734 KPDSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPAPSR 813 (849)
Q Consensus 734 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 813 (849)
... .......||+.|+|||++.+..++.++||||+||++|||++|+.||....... ....+.......+..
T Consensus 202 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~--------~~~~i~~~~~~~~~~ 272 (387)
T 1kob_A 202 NPD-EIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLE--------TLQNVKRCDWEFDED 272 (387)
T ss_dssp CTT-SCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH--------HHHHHHHCCCCCCSS
T ss_pred CCC-cceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHH--------HHHHHHhCCCCCCcc
Confidence 543 33455689999999999999999999999999999999999999997433211 111111111111111
Q ss_pred hhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 814 SAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 814 ~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
........+.+++.+||+.||++|||++|++++
T Consensus 273 ~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 273 AFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred ccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 111223347899999999999999999999986
No 103
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=2.6e-36 Score=326.68 Aligned_cols=241 Identities=19% Similarity=0.357 Sum_probs=186.7
Q ss_pred hcCCCcCceecCCccceEEEEEec-CCcEEEEEEecccCCCCchhhHHHHHHHHHH-----------hhceeecC-----
Q 042123 587 TNDFDAKYCIGNGGHASVYRAELP-SGEVVAVKKFHSLLPCDQTVDQKEFLTEVEA-----------FYGFCSHA----- 649 (849)
Q Consensus 587 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~ei~~-----------~~~~~~~~----- 649 (849)
.++|+..+.||+|+||.||+|+.. +|+.||||++.... .....+.+.+|+.. +++++.+.
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 81 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN---RELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKW 81 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS---TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC---chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchh
Confidence 467899999999999999999765 79999999986532 22334566677653 44444322
Q ss_pred ----------------------------------------------------CeeEEEEEeccCCChhhhhcccccccCC
Q 042123 650 ----------------------------------------------------RHSFLLYEFLERGSLAAILNTDAAAQEL 677 (849)
Q Consensus 650 ----------------------------------------------------~~~~lV~e~~~~gsL~~~l~~~~~~~~l 677 (849)
...++||||+++|+|.+++.........
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~ 161 (332)
T 3qd2_B 82 QEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDR 161 (332)
T ss_dssp HHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGS
T ss_pred hhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccch
Confidence 2379999999999999999876655567
Q ss_pred CHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccCCCCC------------CeeeccC
Q 042123 678 GWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLKPDSS------------NWTEFAG 745 (849)
Q Consensus 678 ~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~------------~~~~~~g 745 (849)
++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++....... ......|
T Consensus 162 ~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~g 238 (332)
T 3qd2_B 162 EHGVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVG 238 (332)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-
T ss_pred hhHHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCC
Confidence 8888999999999999999999 999999999999999999999999999987754421 1233568
Q ss_pred CccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCChhhHHHHHHHHHH
Q 042123 746 TCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPAPSRSAQEKLISIMEV 825 (849)
Q Consensus 746 ~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 825 (849)
|+.|+|||.+.+..++.++||||+|+++|||++|..|+.... ........... +.........+.++
T Consensus 239 t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~----------~~~~~~~~~~~---~~~~~~~~~~~~~l 305 (332)
T 3qd2_B 239 TKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERV----------RIITDVRNLKF---PLLFTQKYPQEHMM 305 (332)
T ss_dssp CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHH----------HHHHHHHTTCC---CHHHHHHCHHHHHH
T ss_pred CcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHH----------HHHHHhhccCC---CcccccCChhHHHH
Confidence 999999999999999999999999999999999988753211 11111122222 22233444567899
Q ss_pred HhhccCCCCCCCCCHHHHHhh
Q 042123 826 AFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 826 i~~cl~~dP~~RPt~~eil~~ 846 (849)
+.+||+.||++|||++|++++
T Consensus 306 i~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 306 VQDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp HHHHHCSSGGGSCCHHHHHHS
T ss_pred HHHHccCCCCcCCCHHHHhhc
Confidence 999999999999999999986
No 104
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=2.9e-36 Score=326.99 Aligned_cols=237 Identities=19% Similarity=0.264 Sum_probs=188.3
Q ss_pred cCCCcCceecCCccceEEEEEec-CCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeEEE
Q 042123 588 NDFDAKYCIGNGGHASVYRAELP-SGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSFLL 655 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~lV 655 (849)
++|+..+.||+|+||.||+|+.. +|+.||||++...... .......+.+|+. .+++++.+....|+|
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhc-cHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 57889999999999999999654 7999999998643110 1112334445543 356777888899999
Q ss_pred EEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccCC
Q 042123 656 YEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLKP 735 (849)
Q Consensus 656 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~~ 735 (849)
|||+++|+|.+++.+. ..+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 120 ~e~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~ 193 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193 (350)
T ss_dssp EECCTTCBHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred EcCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceeccC
Confidence 9999999999999653 3589999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCChhh
Q 042123 736 DSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPAPSRSA 815 (849)
Q Consensus 736 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 815 (849)
. .....||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+.......+....
T Consensus 194 ~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--------~~~~~~i~~~~~~~p~~~~ 262 (350)
T 1rdq_E 194 R---TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP--------IQIYEKIVSGKVRFPSHFS 262 (350)
T ss_dssp C---BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHCCCCCCTTCC
T ss_pred C---cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCH--------HHHHHHHHcCCCCCCCCCC
Confidence 2 2346799999999999999999999999999999999999999974321 1222223333332222222
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCC-----HHHHHhh
Q 042123 816 QEKLISIMEVAFSCFNESPESRPT-----MKIISQQ 846 (849)
Q Consensus 816 ~~~~~~l~~li~~cl~~dP~~RPt-----~~eil~~ 846 (849)
..+.+++.+||+.||++||+ ++||++|
T Consensus 263 ----~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h 294 (350)
T 1rdq_E 263 ----SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp ----HHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred ----HHHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence 34788999999999999998 8998875
No 105
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=3.7e-36 Score=319.90 Aligned_cols=251 Identities=17% Similarity=0.262 Sum_probs=186.4
Q ss_pred hcCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHHHH------HhhceeecCCeeEEEEEec
Q 042123 587 TNDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE------AFYGFCSHARHSFLLYEFL 659 (849)
Q Consensus 587 ~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~------~~~~~~~~~~~~~lV~e~~ 659 (849)
.++|+..+.||+|+||.||+|+. .+++.||||++...........+....+.+. .+..+.......++||||+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~ 87 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL 87 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcchhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec
Confidence 36899999999999999999965 6799999999865433222222222333222 1333445677889999999
Q ss_pred cCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeec---CCCcEEEeeecCCcccCCC
Q 042123 660 ERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLD---LEYEAHVADFGIAKSLKPD 736 (849)
Q Consensus 660 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~---~~~~~kl~DfG~a~~~~~~ 736 (849)
+++|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||+++ .++.+||+|||+++.....
T Consensus 88 -~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (296)
T 3uzp_A 88 -GPSLEDLFNFCS--RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA 161 (296)
T ss_dssp -CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred -CCCHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccc
Confidence 899999996433 3589999999999999999999999 999999999999994 7899999999999876543
Q ss_pred CC-------CeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCC
Q 042123 737 SS-------NWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLP 809 (849)
Q Consensus 737 ~~-------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 (849)
.. ......||+.|+|||.+.+..++.++||||||+++|||++|+.||......... .....+......
T Consensus 162 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-----~~~~~~~~~~~~ 236 (296)
T 3uzp_A 162 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKR-----QKYERISEKKMS 236 (296)
T ss_dssp TTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSS-----SHHHHHHHHHHH
T ss_pred ccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhh-----hhhhhhcccccC
Confidence 22 124457899999999999999999999999999999999999999754321111 011111110000
Q ss_pred CC-ChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 810 AP-SRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 810 ~~-~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
.+ ..........+.+++.+||+.||++|||+++|++.|+
T Consensus 237 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~ 276 (296)
T 3uzp_A 237 TPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFR 276 (296)
T ss_dssp SCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHH
T ss_pred CchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHH
Confidence 00 0000111234888999999999999999999998874
No 106
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=3.3e-36 Score=323.69 Aligned_cols=243 Identities=24% Similarity=0.348 Sum_probs=185.8
Q ss_pred hcCCCcCceecCCccceEEEEEec-CCcEEEEEEecccCCCCchhhHHHHHHHH-----------HHhhceeecCCeeEE
Q 042123 587 TNDFDAKYCIGNGGHASVYRAELP-SGEVVAVKKFHSLLPCDQTVDQKEFLTEV-----------EAFYGFCSHARHSFL 654 (849)
Q Consensus 587 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~ei-----------~~~~~~~~~~~~~~l 654 (849)
.++|++.+.||+|+||+||+|... +++.||||++....... ..+.+.+|+ ..+++++...+..++
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 82 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD---CPENIKKEICINKMLNHENVVKFYGHRREGNIQYL 82 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC----------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccc---hHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence 368999999999999999999654 79999999986432211 112233332 347888888999999
Q ss_pred EEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccC
Q 042123 655 LYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLK 734 (849)
Q Consensus 655 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~ 734 (849)
||||+++|+|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.+.
T Consensus 83 v~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 156 (323)
T 3tki_A 83 FLEYCSGGELFDRIEPDI---GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFR 156 (323)
T ss_dssp EEECCTTEEGGGGSBTTT---BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECE
T ss_pred EEEcCCCCcHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceec
Confidence 999999999999986543 489999999999999999999998 99999999999999999999999999998654
Q ss_pred CCC--CCeeeccCCccccccccccCCCC-CccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCC
Q 042123 735 PDS--SNWTEFAGTCGYIAPELAYTMKI-TEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPAP 811 (849)
Q Consensus 735 ~~~--~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (849)
... .......||+.|+|||++.+..+ +.++||||+||++|+|++|+.||....... ..............
T Consensus 157 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-------~~~~~~~~~~~~~~ 229 (323)
T 3tki_A 157 YNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-------QEYSDWKEKKTYLN 229 (323)
T ss_dssp ETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTS-------HHHHHHHTTCTTST
T ss_pred cCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHH-------HHHHHHhcccccCC
Confidence 221 22345679999999999987776 778999999999999999999997433211 11111111111111
Q ss_pred ChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhh
Q 042123 812 SRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQL 847 (849)
Q Consensus 812 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L 847 (849)
........+.+++.+||+.||++|||++|++++-
T Consensus 230 --~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~ 263 (323)
T 3tki_A 230 --PWKKIDSAPLALLHKILVENPSARITIPDIKKDR 263 (323)
T ss_dssp --TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCT
T ss_pred --ccccCCHHHHHHHHHHccCChhhCcCHHHHhhCh
Confidence 1112233477899999999999999999998863
No 107
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=2.2e-36 Score=334.56 Aligned_cols=247 Identities=21% Similarity=0.286 Sum_probs=176.3
Q ss_pred cCCCcC-ceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHH------HHHHhhceeec----CCeeEEE
Q 042123 588 NDFDAK-YCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLT------EVEAFYGFCSH----ARHSFLL 655 (849)
Q Consensus 588 ~~f~~~-~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~------ei~~~~~~~~~----~~~~~lV 655 (849)
++|... +.||+|+||+||+|.. .+++.||||++.... ....+...+. .+..+++++.. ....|+|
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv 137 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCP---KARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIV 137 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSH---HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcch---hHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEE
Confidence 566665 6899999999999965 478999999986421 1111111111 12335555543 5678999
Q ss_pred EEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecC---CCcEEEeeecCCcc
Q 042123 656 YEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDL---EYEAHVADFGIAKS 732 (849)
Q Consensus 656 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~DfG~a~~ 732 (849)
|||+++|+|.+++.... ...+++.++..++.||+.||+|||+. +|+||||||+||+++. ++.+||+|||+++.
T Consensus 138 ~E~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~ 213 (400)
T 1nxk_A 138 MECLDGGELFSRIQDRG-DQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE 213 (400)
T ss_dssp EECCCSEEHHHHHHCC----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred EEeCCCCcHHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEecccccc
Confidence 99999999999997543 24589999999999999999999998 9999999999999998 78999999999987
Q ss_pred cCCCCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCC
Q 042123 733 LKPDSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPAPS 812 (849)
Q Consensus 733 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (849)
.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.......... .....+.......+.
T Consensus 214 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~----~~~~~i~~~~~~~~~ 288 (400)
T 1nxk_A 214 TTSH-NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP----GMKTRIRMGQYEFPN 288 (400)
T ss_dssp CC------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCC----SHHHHHHHTCCCCCT
T ss_pred cCCC-CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccH----HHHHHHHcCcccCCC
Confidence 6533 23345678999999999999999999999999999999999999997543221110 011111111111111
Q ss_pred hhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 813 RSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 813 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
..+......+.+++.+||+.||++|||++|+++|
T Consensus 289 ~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 289 PEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp TTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred cccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 1111223357899999999999999999999986
No 108
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=3.4e-36 Score=317.84 Aligned_cols=241 Identities=24% Similarity=0.440 Sum_probs=187.1
Q ss_pred hcCCCcCceecCCccceEEEEEecCCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeEEE
Q 042123 587 TNDFDAKYCIGNGGHASVYRAELPSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSFLL 655 (849)
Q Consensus 587 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~lV 655 (849)
.++|+..+.||+|+||.||+|++.++..||||++..... ....+.+|+. .+++++......++|
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 97 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-----SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII 97 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-----CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEE
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-----CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEE
Confidence 468889999999999999999988888999999875422 1234555544 367788888899999
Q ss_pred EEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccCC
Q 042123 656 YEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLKP 735 (849)
Q Consensus 656 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~~ 735 (849)
|||+++|+|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 98 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 172 (283)
T 3gen_A 98 TEYMANGCLLNYLREMR--HRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD 172 (283)
T ss_dssp ECCCTTCBHHHHHHCGG--GCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCC
T ss_pred EeccCCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEccccccccccc
Confidence 99999999999997643 3589999999999999999999999 999999999999999999999999999986643
Q ss_pred CC-CCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCCCCCh
Q 042123 736 DS-SNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIK-GKHPRDFLSSISSSSLNTDVALDQMLDPRLPAPSR 813 (849)
Q Consensus 736 ~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 813 (849)
.. .......+|+.|+|||.+.+..++.++||||+|+++|||++ |+.||...... .....+........+.
T Consensus 173 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~--------~~~~~~~~~~~~~~~~ 244 (283)
T 3gen_A 173 DEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS--------ETAEHIAQGLRLYRPH 244 (283)
T ss_dssp HHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--------HHHHHHHTTCCCCCCT
T ss_pred cccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh--------HHHHHHhcccCCCCCC
Confidence 21 11223346778999999998899999999999999999998 99999743321 1111111111111111
Q ss_pred hhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 814 SAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 814 ~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
.. ...+.+++.+||+.||++|||+++++++|+
T Consensus 245 ~~---~~~l~~li~~~l~~~p~~Rps~~~ll~~L~ 276 (283)
T 3gen_A 245 LA---SEKVYTIMYSCWHEKADERPTFKILLSNIL 276 (283)
T ss_dssp TC---CHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred cC---CHHHHHHHHHHccCChhHCcCHHHHHHHHH
Confidence 11 124778999999999999999999999874
No 109
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=1.9e-36 Score=340.94 Aligned_cols=241 Identities=22% Similarity=0.300 Sum_probs=184.8
Q ss_pred hcCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHHH-----------HHhhceeecCCeeEE
Q 042123 587 TNDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTEV-----------EAFYGFCSHARHSFL 654 (849)
Q Consensus 587 ~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~ei-----------~~~~~~~~~~~~~~l 654 (849)
.++|+..+.||+|+||.||+|+. .+|+.||||++...... .......+.+|+ ..+++++...+..++
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 225 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIV-AKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCF 225 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC--------------CCCCCSCTTSCCEEEEEEETTEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhh-hhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEE
Confidence 36799999999999999999964 57999999998643111 111122334443 346788888899999
Q ss_pred EEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeEecCCCCCCeeecCCCcEEEeeecCCccc
Q 042123 655 LYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHH-DCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSL 733 (849)
Q Consensus 655 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~-~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~ 733 (849)
||||+++|+|.+++... ..+++.++..++.||+.||+|||+ . +|+||||||+|||++.++.+||+|||+++..
T Consensus 226 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~ 299 (446)
T 4ejn_A 226 VMEYANGGELFFHLSRE---RVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEG 299 (446)
T ss_dssp EECCCSSCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTT
T ss_pred EEeeCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceec
Confidence 99999999999998653 358999999999999999999998 7 8999999999999999999999999999875
Q ss_pred CCCCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCh
Q 042123 734 KPDSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPAPSR 813 (849)
Q Consensus 734 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 813 (849)
...........||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+.......+..
T Consensus 300 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--------~~~~~i~~~~~~~p~~ 371 (446)
T 4ejn_A 300 IKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--------KLFELILMEEIRFPRT 371 (446)
T ss_dssp CC-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCCCCCCTT
T ss_pred cCCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH--------HHHHHHHhCCCCCCcc
Confidence 55444556678999999999999999999999999999999999999999743221 1112222222222222
Q ss_pred hhHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHhh
Q 042123 814 SAQEKLISIMEVAFSCFNESPESRP-----TMKIISQQ 846 (849)
Q Consensus 814 ~~~~~~~~l~~li~~cl~~dP~~RP-----t~~eil~~ 846 (849)
.. ..+.+++.+||+.||++|| |++|+++|
T Consensus 372 ~~----~~~~~li~~~L~~dP~~R~~~~~~t~~ell~h 405 (446)
T 4ejn_A 372 LG----PEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 405 (446)
T ss_dssp SC----HHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred CC----HHHHHHHHHHcccCHHHhCCCCCCCHHHHHhC
Confidence 22 3478899999999999999 99999876
No 110
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=8e-36 Score=318.36 Aligned_cols=245 Identities=22% Similarity=0.389 Sum_probs=181.9
Q ss_pred cCCCcCceecCCccceEEEEEecCCcEEEEEEecccCCCCchhhHHHHHHHHHH-----------hhceeecCCeeEEEE
Q 042123 588 NDFDAKYCIGNGGHASVYRAELPSGEVVAVKKFHSLLPCDQTVDQKEFLTEVEA-----------FYGFCSHARHSFLLY 656 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~~-----------~~~~~~~~~~~~lV~ 656 (849)
++|...+.||+|+||.||+|+.. ..+|||.++.... .....+.+.+|+.. +++++. .+..++||
T Consensus 36 ~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~ 110 (307)
T 3lb7_A 36 SEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDP--TPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVT 110 (307)
T ss_dssp TSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred cceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCC--CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEE
Confidence 68889999999999999999874 3589998765322 23334566677653 455543 45678999
Q ss_pred EeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccCCC
Q 042123 657 EFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLKPD 736 (849)
Q Consensus 657 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~ 736 (849)
||+++|+|.+++.... ..+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 111 e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~ 185 (307)
T 3lb7_A 111 QWCEGSSLYKHLHVQE--TKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW 185 (307)
T ss_dssp ECCSSCBHHHHHHTSC--CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC----
T ss_pred ecCCCCcHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceecccc
Confidence 9999999999996443 4589999999999999999999999 9999999999999999999999999999865421
Q ss_pred --CCCeeeccCCcccccccccc---CCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCC
Q 042123 737 --SSNWTEFAGTCGYIAPELAY---TMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPAP 811 (849)
Q Consensus 737 --~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (849)
........||+.|+|||.+. +..++.++||||||+++|||++|+.||......... ..........+.....
T Consensus 186 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~---~~~~~~~~~~~~~~~~ 262 (307)
T 3lb7_A 186 SGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQI---IFMVGRGYASPDLSKL 262 (307)
T ss_dssp --------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHH---HHHHHHTCCCCCSTTS
T ss_pred cccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHH---HHHHhcCCCCcchhhh
Confidence 22234567999999999986 667889999999999999999999999743321100 0000011111111111
Q ss_pred ChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 812 SRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 812 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
.. .....+.+++.+||+.+|++|||+.||+++|+
T Consensus 263 ~~---~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~ 296 (307)
T 3lb7_A 263 YK---NCPKAMKRLVADCVKKVKEERPLFPQILSSIE 296 (307)
T ss_dssp CS---SSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHH
T ss_pred hc---CCcHHHHHHHHHHhhCChhhCcCHHHHHHHHH
Confidence 11 12234788999999999999999999999875
No 111
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=4.9e-37 Score=338.87 Aligned_cols=247 Identities=19% Similarity=0.317 Sum_probs=189.5
Q ss_pred HHHHHHhcCCCcCceecCCccceEEEEEec-CCcEEEEEEecccCC-----CCchhhHHHHHHH-----HHHhhceeecC
Q 042123 581 DEIVKATNDFDAKYCIGNGGHASVYRAELP-SGEVVAVKKFHSLLP-----CDQTVDQKEFLTE-----VEAFYGFCSHA 649 (849)
Q Consensus 581 ~~~~~~~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~~~~~e-----i~~~~~~~~~~ 649 (849)
.++....++|+..+.||+|+||+||+|+.. +++.||+|++.+... ......+...++. +.++++++.+.
T Consensus 62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 141 (410)
T 3v8s_A 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 141 (410)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred HhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence 344455689999999999999999999664 689999999864210 0111112222222 33578888899
Q ss_pred CeeEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecC
Q 042123 650 RHSFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGI 729 (849)
Q Consensus 650 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~ 729 (849)
...|+||||+++|+|.+++... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 142 ~~~~lV~E~~~gg~L~~~l~~~----~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG~ 214 (410)
T 3v8s_A 142 RYLYMVMEYMPGGDLVNLMSNY----DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGT 214 (410)
T ss_dssp SEEEEEECCCTTEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CEEEEEEeCCCCCcHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEeccce
Confidence 9999999999999999998642 489999999999999999999999 999999999999999999999999999
Q ss_pred CcccCCCCC-CeeeccCCccccccccccCCC----CCccchHHHHHHHHHHHHhCCCCCCcccccccccccccccccccc
Q 042123 730 AKSLKPDSS-NWTEFAGTCGYIAPELAYTMK----ITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQML 804 (849)
Q Consensus 730 a~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~----~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~ 804 (849)
++....... .....+||+.|+|||++.+.. ++.++|||||||++|||++|+.||...... .....+.
T Consensus 215 a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~--------~~~~~i~ 286 (410)
T 3v8s_A 215 CMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV--------GTYSKIM 286 (410)
T ss_dssp CEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHHHH
T ss_pred eEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChh--------hHHHHHH
Confidence 987654322 233568999999999997665 789999999999999999999999743221 1111121
Q ss_pred C----CCCCCCChhhHHHHHHHHHHHhhccCCCCCC--CCCHHHHHhh
Q 042123 805 D----PRLPAPSRSAQEKLISIMEVAFSCFNESPES--RPTMKIISQQ 846 (849)
Q Consensus 805 ~----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPt~~eil~~ 846 (849)
. ...+...... ..+.+++.+|++.+|.+ ||+++||++|
T Consensus 287 ~~~~~~~~p~~~~~s----~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 287 NHKNSLTFPDDNDIS----KEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp THHHHCCCCTTCCCC----HHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred hccccccCCCccccc----HHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 1 1222211112 24778899999999988 9999999987
No 112
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=1.3e-36 Score=332.90 Aligned_cols=252 Identities=22% Similarity=0.399 Sum_probs=190.8
Q ss_pred HHHHHHHhcCCCcCceecCCccceEEEEEe------cCCcEEEEEEecccCCCCchhhHHHHHHHHH------------H
Q 042123 580 YDEIVKATNDFDAKYCIGNGGHASVYRAEL------PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE------------A 641 (849)
Q Consensus 580 ~~~~~~~~~~f~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~------------~ 641 (849)
..++....++|+..+.||+|+||.||+|++ .+++.||||++.... .....+.+.+|+. .
T Consensus 14 ~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~hpniv~ 90 (359)
T 3vhe_A 14 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA---THSEHRALMSELKILIHIGHHLNVVN 90 (359)
T ss_dssp HHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred cccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcC---CHHHHHHHHHHHHHHHhhcCCcceee
Confidence 345555668999999999999999999963 356889999987542 2223345555544 2
Q ss_pred hhceeecC-CeeEEEEEeccCCChhhhhccccc-----------------------------------------------
Q 042123 642 FYGFCSHA-RHSFLLYEFLERGSLAAILNTDAA----------------------------------------------- 673 (849)
Q Consensus 642 ~~~~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~----------------------------------------------- 673 (849)
+++++... ...++||||+++|+|.+++.....
T Consensus 91 ~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (359)
T 3vhe_A 91 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEE 170 (359)
T ss_dssp EEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------------
T ss_pred eeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccc
Confidence 55666554 458999999999999999975432
Q ss_pred ----------------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccCCCC
Q 042123 674 ----------------AQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLKPDS 737 (849)
Q Consensus 674 ----------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 737 (849)
...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 171 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~ 247 (359)
T 3vhe_A 171 KSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 247 (359)
T ss_dssp -------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCT
T ss_pred cccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeecccc
Confidence 11289999999999999999999999 99999999999999999999999999998764433
Q ss_pred C--CeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCC-CCCCCCh
Q 042123 738 S--NWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIK-GKHPRDFLSSISSSSLNTDVALDQMLDP-RLPAPSR 813 (849)
Q Consensus 738 ~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 813 (849)
. ......+|+.|+|||++.+..++.++||||||+++|||++ |+.||....... .....+... ....+..
T Consensus 248 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-------~~~~~~~~~~~~~~~~~ 320 (359)
T 3vhe_A 248 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-------EFCRRLKEGTRMRAPDY 320 (359)
T ss_dssp TCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH-------HHHHHHHHTCCCCCCTT
T ss_pred cchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH-------HHHHHHHcCCCCCCCCC
Confidence 2 2334567889999999999999999999999999999998 999997432111 111111111 1111111
Q ss_pred hhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 814 SAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 814 ~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
. ...+.+++.+||+.||++|||++|++++|+
T Consensus 321 ~----~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 351 (359)
T 3vhe_A 321 T----TPEMYQTMLDCWHGEPSQRPTFSELVEHLG 351 (359)
T ss_dssp C----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred C----CHHHHHHHHHHccCChhhCCCHHHHHHHHH
Confidence 1 224788999999999999999999999985
No 113
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=6.4e-36 Score=326.95 Aligned_cols=242 Identities=22% Similarity=0.348 Sum_probs=186.9
Q ss_pred cCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeEEE
Q 042123 588 NDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSFLL 655 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~lV 655 (849)
++|++.+.||+|+||.||+|+. .+++.||+|.+..... ......+.+.+|+. .+++++......++|
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~-~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv 93 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKC-VERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV 93 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHH-HHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhc-ccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 6789999999999999999965 4688999999864311 11112344555544 367788888899999
Q ss_pred EEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccCC
Q 042123 656 YEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLKP 735 (849)
Q Consensus 656 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~~ 735 (849)
|||+++|+|.+++... ..+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 94 ~e~~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 167 (384)
T 4fr4_A 94 VDLLLGGDLRYHLQQN---VHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR 167 (384)
T ss_dssp ECCCTTEEHHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeeccC
Confidence 9999999999999653 3589999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCeeeccCCccccccccccC---CCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCC
Q 042123 736 DSSNWTEFAGTCGYIAPELAYT---MKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPAPS 812 (849)
Q Consensus 736 ~~~~~~~~~g~~~y~aPE~~~~---~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (849)
. .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||....... .......+.......+.
T Consensus 168 ~-~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~-----~~~~~~~~~~~~~~~p~ 241 (384)
T 4fr4_A 168 E-TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTS-----SKEIVHTFETTVVTYPS 241 (384)
T ss_dssp T-CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSC-----HHHHHHHHHHCCCCCCT
T ss_pred C-CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCcc-----HHHHHHHHhhcccCCCC
Confidence 3 33456789999999999863 458999999999999999999999997432211 11111111112222222
Q ss_pred hhhHHHHHHHHHHHhhccCCCCCCCCC-HHHHHhh
Q 042123 813 RSAQEKLISIMEVAFSCFNESPESRPT-MKIISQQ 846 (849)
Q Consensus 813 ~~~~~~~~~l~~li~~cl~~dP~~RPt-~~eil~~ 846 (849)
.. ...+.+++.+||+.||++||+ ++++.++
T Consensus 242 ~~----s~~~~~li~~lL~~dP~~R~s~~~~l~~h 272 (384)
T 4fr4_A 242 AW----SQEMVSLLKKLLEPNPDQRFSQLSDVQNF 272 (384)
T ss_dssp TS----CHHHHHHHHHHSCSSGGGSCCSHHHHHTS
T ss_pred cC----CHHHHHHHHHHhcCCHhHhcccHHHHHcC
Confidence 22 234788999999999999998 7777654
No 114
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=6.1e-36 Score=315.05 Aligned_cols=242 Identities=24% Similarity=0.417 Sum_probs=167.6
Q ss_pred hcCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeEE
Q 042123 587 TNDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSFL 654 (849)
Q Consensus 587 ~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~l 654 (849)
.++|+..+.||+|+||.||+|+. .+++.||||.+...... .......+.+|+. ++++++.+.+..++
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 88 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMY-KAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYL 88 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhh-hhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEE
Confidence 36789999999999999999965 57999999998643110 1111234555544 36778888889999
Q ss_pred EEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccC
Q 042123 655 LYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLK 734 (849)
Q Consensus 655 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~ 734 (849)
||||+++++|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+....
T Consensus 89 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~ 163 (278)
T 3cok_A 89 VLEMCHNGEMNRYLKNRV--KPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLK 163 (278)
T ss_dssp EEECCTTEEHHHHHHTCS--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEecCCCCcHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeecc
Confidence 999999999999987542 4589999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCChh
Q 042123 735 PDSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPAPSRS 814 (849)
Q Consensus 735 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 814 (849)
..........|++.|+|||.+.+..++.++||||+|+++|||++|+.||....... ............+...
T Consensus 164 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--------~~~~~~~~~~~~~~~~ 235 (278)
T 3cok_A 164 MPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKN--------TLNKVVLADYEMPSFL 235 (278)
T ss_dssp ----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-------------CCSSCCCCCTTS
T ss_pred CCCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHH--------HHHHHhhcccCCcccc
Confidence 44333445678999999999998889999999999999999999999997433211 1111111111111111
Q ss_pred hHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 815 AQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 815 ~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
...+.+++.+||+.||++|||+++++++
T Consensus 236 ----~~~~~~li~~~l~~dp~~Rps~~~~l~h 263 (278)
T 3cok_A 236 ----SIEAKDLIHQLLRRNPADRLSLSSVLDH 263 (278)
T ss_dssp ----CHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred ----CHHHHHHHHHHcccCHhhCCCHHHHhcC
Confidence 2347789999999999999999999875
No 115
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=9.9e-36 Score=315.79 Aligned_cols=251 Identities=17% Similarity=0.232 Sum_probs=184.9
Q ss_pred cCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeEEE
Q 042123 588 NDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSFLL 655 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~lV 655 (849)
++|+..+.||+|+||+||+|+. .+++.||||++..... .......+.+|+. ++++++..+...++|
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 79 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD--DEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLV 79 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCS--STTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCC--cCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEE
Confidence 5788999999999999999965 4689999999875432 2222345556654 367788888999999
Q ss_pred EEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccCC
Q 042123 656 YEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLKP 735 (849)
Q Consensus 656 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~~ 735 (849)
|||+++ ++.+.+.... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 80 ~e~~~~-~l~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 153 (292)
T 3o0g_A 80 FEFCDQ-DLKKYFDSCN--GDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGI 153 (292)
T ss_dssp EECCSE-EHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCS
T ss_pred EecCCC-CHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCC
Confidence 999986 5555554322 4589999999999999999999999 999999999999999999999999999987765
Q ss_pred CCCCeeeccCCccccccccccCCC-CCccchHHHHHHHHHHHHhCCCCCCccccccc-----------cccccccccccc
Q 042123 736 DSSNWTEFAGTCGYIAPELAYTMK-ITEKCDVYSFGVLMWEVIKGKHPRDFLSSISS-----------SSLNTDVALDQM 803 (849)
Q Consensus 736 ~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~-----------~~~~~~~~~~~~ 803 (849)
.........+|+.|+|||.+.+.. ++.++||||+||++|||++|..||........ ............
T Consensus 154 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 233 (292)
T 3o0g_A 154 PVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKL 233 (292)
T ss_dssp CCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGS
T ss_pred ccccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhccc
Confidence 544455668899999999988766 79999999999999999999888642221100 000000000000
Q ss_pred cCC-------CCCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 804 LDP-------RLPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 804 ~~~-------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
.+. ...............+.+++.+||+.||++|||++|+++|
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 234 PDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp TTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 000 0000000111122347789999999999999999999986
No 116
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1e-35 Score=322.73 Aligned_cols=258 Identities=25% Similarity=0.374 Sum_probs=184.1
Q ss_pred HHHHHHhcCCCcCceecCCccceEEEEEecCCcEEEEEEecccCCCCchhhHHHHHH-------HHHHhhceeecC----
Q 042123 581 DEIVKATNDFDAKYCIGNGGHASVYRAELPSGEVVAVKKFHSLLPCDQTVDQKEFLT-------EVEAFYGFCSHA---- 649 (849)
Q Consensus 581 ~~~~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~-------ei~~~~~~~~~~---- 649 (849)
.......++|+..+.||+|+||.||+|+.. ++.||||++..... .....+.+... .+..+++++...
T Consensus 30 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~-~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~ 107 (337)
T 3mdy_A 30 LVQRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTEE-ASWFRETEIYQTVLMRHENILGFIAADIKGTGSW 107 (337)
T ss_dssp HHHTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGG
T ss_pred ccccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecccc-chhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCC
Confidence 333445678999999999999999999885 89999999854311 00000111110 122355666555
Q ss_pred CeeEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcC-----CCCeEecCCCCCCeeecCCCcEEE
Q 042123 650 RHSFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDC-----FPPIVHRDISSKNLLLDLEYEAHV 724 (849)
Q Consensus 650 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~-----~~~ivH~dlk~~Nill~~~~~~kl 724 (849)
...++||||+++|+|.+++... .+++.++..++.|++.||+|||+.. .++|+||||||+||+++.++.+||
T Consensus 108 ~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl 183 (337)
T 3mdy_A 108 TQLYLITDYHENGSLYDYLKST----TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCI 183 (337)
T ss_dssp CEEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEE
T ss_pred CceEEEEeccCCCcHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEE
Confidence 6789999999999999999543 4899999999999999999999752 238999999999999999999999
Q ss_pred eeecCCcccCCCCCC----eeeccCCccccccccccCCCCCcc------chHHHHHHHHHHHHhC----------CCCCC
Q 042123 725 ADFGIAKSLKPDSSN----WTEFAGTCGYIAPELAYTMKITEK------CDVYSFGVLMWEVIKG----------KHPRD 784 (849)
Q Consensus 725 ~DfG~a~~~~~~~~~----~~~~~g~~~y~aPE~~~~~~~~~~------~Dv~SlGvil~el~tg----------~~Pf~ 784 (849)
+|||+++.+...... .....||+.|+|||++.+..++.+ +|||||||++|||++| +.||.
T Consensus 184 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~ 263 (337)
T 3mdy_A 184 ADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYH 263 (337)
T ss_dssp CCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTT
T ss_pred EeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHh
Confidence 999999876543322 124578999999999987766654 9999999999999999 44544
Q ss_pred ccccccccccccccccccc----cCCCCCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 785 FLSSISSSSLNTDVALDQM----LDPRLPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 785 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
....... ......... ..+..+. ..........+.+++.+||+.||++|||+.||+++|+
T Consensus 264 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 327 (337)
T 3mdy_A 264 DLVPSDP---SYEDMREIVCIKKLRPSFPN-RWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLA 327 (337)
T ss_dssp TTSCSSC---CHHHHHHHHTTSCCCCCCCG-GGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred hhcCCCC---chhhhHHHHhhhccCccccc-cchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHH
Confidence 2211110 000011111 1111111 1112355667899999999999999999999999985
No 117
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=4.6e-36 Score=352.46 Aligned_cols=242 Identities=22% Similarity=0.332 Sum_probs=191.6
Q ss_pred HhcCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHHHH------------HhhceeecCCee
Q 042123 586 ATNDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE------------AFYGFCSHARHS 652 (849)
Q Consensus 586 ~~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~------------~~~~~~~~~~~~ 652 (849)
..++|+..+.||+|+||.||+|+. .+++.||||++...... .......+..|.. .+++++...+..
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~-~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~ 417 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVI-QDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL 417 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHH-HTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccc-cHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEE
Confidence 457899999999999999999965 46889999998653110 0111222333322 356677778899
Q ss_pred EEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcc
Q 042123 653 FLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKS 732 (849)
Q Consensus 653 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~ 732 (849)
|+||||+++|+|.+++... ..+++.++..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+|+.
T Consensus 418 ~lV~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~ 491 (674)
T 3pfq_A 418 YFVMEYVNGGDLMYHIQQV---GRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKE 491 (674)
T ss_dssp EEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEE
T ss_pred EEEEeCcCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeec
Confidence 9999999999999999754 3599999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCC
Q 042123 733 LKPDSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPAPS 812 (849)
Q Consensus 733 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (849)
............||+.|+|||++.+..|+.++|||||||++|||++|+.||...+ .......+.......+.
T Consensus 492 ~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~--------~~~~~~~i~~~~~~~p~ 563 (674)
T 3pfq_A 492 NIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED--------EDELFQSIMEHNVAYPK 563 (674)
T ss_dssp CCCTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHSSCCCCCT
T ss_pred cccCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCC--------HHHHHHHHHhCCCCCCc
Confidence 5544455566789999999999999999999999999999999999999997432 12233334444433332
Q ss_pred hhhHHHHHHHHHHHhhccCCCCCCCCCH-----HHHHhh
Q 042123 813 RSAQEKLISIMEVAFSCFNESPESRPTM-----KIISQQ 846 (849)
Q Consensus 813 ~~~~~~~~~l~~li~~cl~~dP~~RPt~-----~eil~~ 846 (849)
... ..+.+++.+||++||++||++ +||++|
T Consensus 564 ~~s----~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h 598 (674)
T 3pfq_A 564 SMS----KEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 598 (674)
T ss_dssp TSC----HHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSS
T ss_pred cCC----HHHHHHHHHHccCCHHHCCCCCCCcHHHHhcC
Confidence 222 347889999999999999998 788765
No 118
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=5.7e-36 Score=327.94 Aligned_cols=237 Identities=19% Similarity=0.258 Sum_probs=182.1
Q ss_pred cCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeEEEEEec
Q 042123 592 AKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSFLLYEFL 659 (849)
Q Consensus 592 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~lV~e~~ 659 (849)
..+.||+|+||.||+|.. .+|+.||||++.... ......+.+|+. ++++++...+..++||||+
T Consensus 93 ~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~ 168 (373)
T 2x4f_A 93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRG----MKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYV 168 (373)
T ss_dssp EEEECC-----CEEEEEETTTCCEEEEEEEECCS----HHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred cceEEecCcCEEEEEEEEcCCCcEEEEEEEcccc----cccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCC
Confidence 356899999999999965 579999999987532 233455666655 3677888889999999999
Q ss_pred cCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeee--cCCCcEEEeeecCCcccCCCC
Q 042123 660 ERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLL--DLEYEAHVADFGIAKSLKPDS 737 (849)
Q Consensus 660 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill--~~~~~~kl~DfG~a~~~~~~~ 737 (849)
++|+|.+++.... ..+++.++..++.||+.||+|||+. +|+||||||+||++ +.++.+||+|||+++......
T Consensus 169 ~~~~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~ 243 (373)
T 2x4f_A 169 DGGELFDRIIDES--YNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE 243 (373)
T ss_dssp TTCEEHHHHHHTG--GGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC
T ss_pred CCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc
Confidence 9999999886433 3589999999999999999999999 99999999999999 567899999999998775432
Q ss_pred CCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCChhhHH
Q 042123 738 SNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPAPSRSAQE 817 (849)
Q Consensus 738 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 817 (849)
......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+.......+......
T Consensus 244 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~--------~~~~~i~~~~~~~~~~~~~~ 314 (373)
T 2x4f_A 244 -KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDA--------ETLNNILACRWDLEDEEFQD 314 (373)
T ss_dssp -BCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHHHHHTCCCSCSGGGTT
T ss_pred -ccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhccCCCChhhhcc
Confidence 234457999999999999889999999999999999999999999743321 12222222222222222222
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 818 KLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 818 ~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
....+.+++.+||+.||++|||++|++++
T Consensus 315 ~~~~~~~li~~~L~~dp~~Rps~~e~l~h 343 (373)
T 2x4f_A 315 ISEEAKEFISKLLIKEKSWRISASEALKH 343 (373)
T ss_dssp SCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred CCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 33458899999999999999999999985
No 119
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=8.1e-36 Score=328.78 Aligned_cols=244 Identities=24% Similarity=0.410 Sum_probs=189.3
Q ss_pred hcCCCcCceecCCccceEEEEEec--------CCcEEEEEEecccCCCCchhhHHHHHHHHH------------Hhhcee
Q 042123 587 TNDFDAKYCIGNGGHASVYRAELP--------SGEVVAVKKFHSLLPCDQTVDQKEFLTEVE------------AFYGFC 646 (849)
Q Consensus 587 ~~~f~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~~ei~------------~~~~~~ 646 (849)
.++|.+.+.||+|+||+||+|+.. .+..||||++.... .......+.+|+. ++++++
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~ 144 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA---TEKDLSDLISEMEMMKMIGKHKNIINLLGAC 144 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeecccc---CHHHHHHHHHHHHHHHHhcCCchhhhheeee
Confidence 367888999999999999999642 34579999987542 2222344555543 367788
Q ss_pred ecCCeeEEEEEeccCCChhhhhccccc-------------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCC
Q 042123 647 SHARHSFLLYEFLERGSLAAILNTDAA-------------AQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKN 713 (849)
Q Consensus 647 ~~~~~~~lV~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~N 713 (849)
...+..++||||+++|+|.+++..... ...+++.++..++.||+.||+|||+. +|+||||||+|
T Consensus 145 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~N 221 (382)
T 3tt0_A 145 TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARN 221 (382)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGG
T ss_pred ccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcce
Confidence 888899999999999999999975431 23589999999999999999999999 99999999999
Q ss_pred eeecCCCcEEEeeecCCcccCCCCC--CeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCcccccc
Q 042123 714 LLLDLEYEAHVADFGIAKSLKPDSS--NWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIK-GKHPRDFLSSIS 790 (849)
Q Consensus 714 ill~~~~~~kl~DfG~a~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~t-g~~Pf~~~~~~~ 790 (849)
|+++.++.+||+|||+++....... ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||......
T Consensus 222 Ill~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~- 300 (382)
T 3tt0_A 222 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE- 300 (382)
T ss_dssp EEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-
T ss_pred EEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH-
Confidence 9999999999999999987654322 2233456789999999999999999999999999999999 99998743211
Q ss_pred ccccccccccccccCCCCC-CCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 791 SSSLNTDVALDQMLDPRLP-APSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
.....+...... .+... ...+.+++.+||+.||++|||++||+++|+
T Consensus 301 -------~~~~~~~~~~~~~~~~~~----~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 348 (382)
T 3tt0_A 301 -------ELFKLLKEGHRMDKPSNC----TNELYMMMRDCWHAVPSQRPTFKQLVEDLD 348 (382)
T ss_dssp -------HHHHHHHTTCCCCCCSSC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -------HHHHHHHcCCCCCCCccC----CHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 111111111111 11111 234788999999999999999999999875
No 120
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=8e-36 Score=321.00 Aligned_cols=245 Identities=19% Similarity=0.262 Sum_probs=191.6
Q ss_pred hcCCCcCceecCCccceEEEEEec-CCcEEEEEEecccCCCCc--hhhHHHHHHHHH-----------HhhceeecCCee
Q 042123 587 TNDFDAKYCIGNGGHASVYRAELP-SGEVVAVKKFHSLLPCDQ--TVDQKEFLTEVE-----------AFYGFCSHARHS 652 (849)
Q Consensus 587 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~--~~~~~~~~~ei~-----------~~~~~~~~~~~~ 652 (849)
.+.|+..+.||+|+||.||+|+.. +|+.||||.+........ ......+.+|+. .+++++......
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 367899999999999999999654 689999999875432221 112445555544 367788888899
Q ss_pred EEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCC----cEEEeeec
Q 042123 653 FLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEY----EAHVADFG 728 (849)
Q Consensus 653 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~----~~kl~DfG 728 (849)
++||||+++++|.+++... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||
T Consensus 91 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg 164 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQK---ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFG 164 (321)
T ss_dssp EEEECCCCSCBHHHHHHTC---SCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCT
T ss_pred EEEEEcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccCc
Confidence 9999999999999999653 3589999999999999999999999 999999999999999887 79999999
Q ss_pred CCcccCCCCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCC
Q 042123 729 IAKSLKPDSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRL 808 (849)
Q Consensus 729 ~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 808 (849)
++....... ......||+.|+|||.+.+..++.++||||||+++|+|++|+.||...... .....+.....
T Consensus 165 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------~~~~~i~~~~~ 235 (321)
T 2a2a_A 165 LAHEIEDGV-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ--------ETLANITSVSY 235 (321)
T ss_dssp TCEECCTTC-CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH--------HHHHHHHTTCC
T ss_pred cceecCccc-cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHH--------HHHHHHHhccc
Confidence 998765432 234567899999999999999999999999999999999999999643211 11122222222
Q ss_pred CCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 809 PAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 809 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
..+..........+.+++.+||+.||++|||++|++++
T Consensus 236 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 236 DFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp CCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred ccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 21111111223457899999999999999999999986
No 121
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=3.1e-36 Score=329.84 Aligned_cols=244 Identities=25% Similarity=0.418 Sum_probs=187.8
Q ss_pred cCCCcCceecCCccceEEEEEec------CCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCC
Q 042123 588 NDFDAKYCIGNGGHASVYRAELP------SGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHAR 650 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~ 650 (849)
++|+..+.||+|+||+||+|++. +++.||||++.... .......+.+|+. .+++++....
T Consensus 71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~ 147 (367)
T 3l9p_A 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC---SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL 147 (367)
T ss_dssp GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSC---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEeccccc---ChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCC
Confidence 67888999999999999999742 46789999986432 2233344555544 3677888888
Q ss_pred eeEEEEEeccCCChhhhhcccc----cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCC---cEE
Q 042123 651 HSFLLYEFLERGSLAAILNTDA----AAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEY---EAH 723 (849)
Q Consensus 651 ~~~lV~e~~~~gsL~~~l~~~~----~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~---~~k 723 (849)
..++||||+++|+|.+++.... ....+++.+++.++.||+.||+|||+. +|+||||||+||+++.++ .+|
T Consensus 148 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~k 224 (367)
T 3l9p_A 148 PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAK 224 (367)
T ss_dssp SCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEE
T ss_pred CCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEE
Confidence 8999999999999999997543 123589999999999999999999999 999999999999999655 599
Q ss_pred EeeecCCcccCCC--CCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCcccccccccccccccc
Q 042123 724 VADFGIAKSLKPD--SSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIK-GKHPRDFLSSISSSSLNTDVAL 800 (849)
Q Consensus 724 l~DfG~a~~~~~~--~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~t-g~~Pf~~~~~~~~~~~~~~~~~ 800 (849)
|+|||+++..... ........+|+.|+|||.+.+..++.++|||||||++|||++ |+.||..... ....
T Consensus 225 L~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~--------~~~~ 296 (367)
T 3l9p_A 225 IGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--------QEVL 296 (367)
T ss_dssp ECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--------HHHH
T ss_pred ECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH--------HHHH
Confidence 9999999754221 122334567899999999999999999999999999999998 9999974322 1112
Q ss_pred ccccCCCCCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 801 DQMLDPRLPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
..+........... ....+.+++.+||+.||++|||+++|+++|+
T Consensus 297 ~~i~~~~~~~~~~~---~~~~l~~li~~~l~~dP~~Rps~~eil~~l~ 341 (367)
T 3l9p_A 297 EFVTSGGRMDPPKN---CPGPVYRIMTQCWQHQPEDRPNFAIILERIE 341 (367)
T ss_dssp HHHHTTCCCCCCTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHcCCCCCCCcc---CCHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence 22222221111111 1224778999999999999999999999875
No 122
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=4e-36 Score=318.06 Aligned_cols=251 Identities=22% Similarity=0.297 Sum_probs=183.1
Q ss_pred cCCCcCceecCCccceEEEEEecCCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeEEEE
Q 042123 588 NDFDAKYCIGNGGHASVYRAELPSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSFLLY 656 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~lV~ 656 (849)
++|+..+.||+|+||+||+|+..+++.||||++..... .......+.+|+. ++++++...+..++||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKE--DEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVF 79 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSG--GGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEE
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEecccc--ccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEE
Confidence 57889999999999999999888899999999865422 1112234555544 3677888888999999
Q ss_pred EeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccCCC
Q 042123 657 EFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLKPD 736 (849)
Q Consensus 657 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~ 736 (849)
||+++ +|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 80 e~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 153 (288)
T 1ob3_A 80 EHLDQ-DLKKLLDVCE--GGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIP 153 (288)
T ss_dssp ECCSE-EHHHHHHTST--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-
T ss_pred EecCC-CHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCcc
Confidence 99986 8998886543 3589999999999999999999999 9999999999999999999999999999876544
Q ss_pred CCCeeeccCCccccccccccC-CCCCccchHHHHHHHHHHHHhCCCCCCccccccccc------------cccccccccc
Q 042123 737 SSNWTEFAGTCGYIAPELAYT-MKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSS------------LNTDVALDQM 803 (849)
Q Consensus 737 ~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~------------~~~~~~~~~~ 803 (849)
........+|+.|+|||.+.+ ..++.++||||+||++|||++|+.||.......... ..........
T Consensus 154 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (288)
T 1ob3_A 154 VRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPK 233 (288)
T ss_dssp --------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTT
T ss_pred ccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccc
Confidence 344455678999999999876 458999999999999999999999997533211000 0000000000
Q ss_pred cCCCCCC----CC-hhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 804 LDPRLPA----PS-RSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 804 ~~~~~~~----~~-~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
.++.... +. .........+.+++.+||+.||++|||++|+++|
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 234 YDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp CCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 1111100 00 0001122347789999999999999999999986
No 123
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=3e-36 Score=325.00 Aligned_cols=255 Identities=19% Similarity=0.291 Sum_probs=190.6
Q ss_pred cccHHHHHHHhcCCCcC-ceecCCccceEEEEEec-CCcEEEEEEecccCCCCchhhHHHHHHHHH------------Hh
Q 042123 577 KILYDEIVKATNDFDAK-YCIGNGGHASVYRAELP-SGEVVAVKKFHSLLPCDQTVDQKEFLTEVE------------AF 642 (849)
Q Consensus 577 ~~~~~~~~~~~~~f~~~-~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~ei~------------~~ 642 (849)
.+.+.......+.|... +.||+|+||.||+|... +++.||||++....... .....+.+|+. .+
T Consensus 17 n~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~~e~~~l~~l~~~~~iv~~ 94 (327)
T 3lm5_A 17 NLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQ--DCRAEILHEIAVLELAKSCPRVINL 94 (327)
T ss_dssp CCCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTE--ECHHHHHHHHHHHHHTTTCTTBCCE
T ss_pred hhHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcch--HHHHHHHHHHHHHHhccCCCCEEEE
Confidence 44445555666788877 88999999999999654 69999999987543221 22334444433 36
Q ss_pred hceeecCCeeEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecC---C
Q 042123 643 YGFCSHARHSFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDL---E 719 (849)
Q Consensus 643 ~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~---~ 719 (849)
++++......++||||+++|+|.+++.... ...+++.++..++.|++.||+|||+. +|+||||||+||+++. +
T Consensus 95 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~ 170 (327)
T 3lm5_A 95 HEVYENTSEIILILEYAAGGEIFSLCLPEL-AEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPL 170 (327)
T ss_dssp EEEEECSSEEEEEEECCTTEEGGGGGSSCC--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTB
T ss_pred EEEEEeCCeEEEEEEecCCCcHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCC
Confidence 777888889999999999999999986542 34589999999999999999999999 9999999999999988 7
Q ss_pred CcEEEeeecCCcccCCCCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccc
Q 042123 720 YEAHVADFGIAKSLKPDSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVA 799 (849)
Q Consensus 720 ~~~kl~DfG~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~ 799 (849)
+.+||+|||+++...... ......||+.|+|||++.+..++.++||||+|+++|||++|+.||....... .
T Consensus 171 ~~~kL~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--------~ 241 (327)
T 3lm5_A 171 GDIKIVDFGMSRKIGHAC-ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQE--------T 241 (327)
T ss_dssp CCEEECCGGGCEEC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--------H
T ss_pred CcEEEeeCccccccCCcc-ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchH--------H
Confidence 899999999998765432 2344679999999999999999999999999999999999999997433211 1
Q ss_pred cccccCCCCCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 800 LDQMLDPRLPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
...+.......+..........+.+++.+||+.||++|||+++++++
T Consensus 242 ~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 242 YLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp HHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred HHHHHhcccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 11111111111111111223347789999999999999999999886
No 124
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=1.3e-35 Score=318.46 Aligned_cols=253 Identities=19% Similarity=0.293 Sum_probs=173.7
Q ss_pred hcCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeEE
Q 042123 587 TNDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSFL 654 (849)
Q Consensus 587 ~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~l 654 (849)
.++|+..+.||+|+||.||+|.. .+|+.||||++....... ....+.+|+. ++++++..++..++
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~---~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 80 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEG---TPSTAIREISLMKELKHENIVRLYDVIHTENKLTL 80 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTC---SCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccc---cHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEE
Confidence 46899999999999999999965 468999999986542211 1233444543 46788888889999
Q ss_pred EEEeccCCChhhhhcccc---cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCc
Q 042123 655 LYEFLERGSLAAILNTDA---AAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAK 731 (849)
Q Consensus 655 V~e~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~ 731 (849)
||||++ |+|.+++.... ....+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 81 v~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~ 156 (317)
T 2pmi_A 81 VFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLAR 156 (317)
T ss_dssp EEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCE
T ss_pred EEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccce
Confidence 999998 59999886432 123589999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCCeeeccCCccccccccccC-CCCCccchHHHHHHHHHHHHhCCCCCCccccccccc----------ccccccc
Q 042123 732 SLKPDSSNWTEFAGTCGYIAPELAYT-MKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSS----------LNTDVAL 800 (849)
Q Consensus 732 ~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~----------~~~~~~~ 800 (849)
.............+|+.|+|||++.+ ..++.++||||+||++|||++|+.||.......... .......
T Consensus 157 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 236 (317)
T 2pmi_A 157 AFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSV 236 (317)
T ss_dssp ETTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGG
T ss_pred ecCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhh
Confidence 77544444455678999999999876 468999999999999999999999997533211000 0000000
Q ss_pred cc--ccCCCCCCC-Chhh---------HHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 801 DQ--MLDPRLPAP-SRSA---------QEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 801 ~~--~~~~~~~~~-~~~~---------~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
.. ...+.+... .... ......+.+++.+||+.||++|||++|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 237 TKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp GGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 00 000000000 0000 0112358899999999999999999999875
No 125
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=1.2e-35 Score=333.56 Aligned_cols=239 Identities=21% Similarity=0.330 Sum_probs=190.3
Q ss_pred cCCCcCceecCCccceEEEEEec-CCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeEEE
Q 042123 588 NDFDAKYCIGNGGHASVYRAELP-SGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSFLL 655 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~lV 655 (849)
++|...+.||+|+||.||+|+.. +|+.||||++...... .......+.+|+. ++++++......++|
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv 94 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIR-SLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV 94 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHH-HTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhcc-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 67889999999999999999664 7999999998643110 1112334555554 367788888999999
Q ss_pred EEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccCC
Q 042123 656 YEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLKP 735 (849)
Q Consensus 656 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~~ 735 (849)
|||+++|+|.+++... ..+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 95 ~E~~~gg~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~ 168 (476)
T 2y94_A 95 MEYVSGGELFDYICKN---GRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 168 (476)
T ss_dssp EECCSSEEHHHHTTSS---SSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECCT
T ss_pred EeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhccc
Confidence 9999999999999653 3589999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCeeeccCCccccccccccCCCC-CccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCChh
Q 042123 736 DSSNWTEFAGTCGYIAPELAYTMKI-TEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPAPSRS 814 (849)
Q Consensus 736 ~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 814 (849)
. .......||+.|+|||.+.+..+ +.++||||+||++|||++|+.||+.... ......+.+.....+...
T Consensus 169 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~--------~~~~~~i~~~~~~~p~~~ 239 (476)
T 2y94_A 169 G-EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHV--------PTLFKKICDGIFYTPQYL 239 (476)
T ss_dssp T-CCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSS--------HHHHHHHHTTCCCCCTTC
T ss_pred c-ccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCH--------HHHHHHHhcCCcCCCccC
Confidence 3 33455689999999999988766 6899999999999999999999974321 112222333333222222
Q ss_pred hHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 815 AQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 815 ~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
. ..+.+++.+||+.||++|||++|+++|
T Consensus 240 s----~~~~~Li~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 240 N----PSVISLLKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp C----HHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred C----HHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence 2 247889999999999999999999875
No 126
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=4.2e-36 Score=333.98 Aligned_cols=255 Identities=19% Similarity=0.285 Sum_probs=190.4
Q ss_pred HHHHHHHhcCCCcCceecCCccceEEEEEec-CCcEEEEEEecccCC-----CCchhhHHHHHHH-----HHHhhceeec
Q 042123 580 YDEIVKATNDFDAKYCIGNGGHASVYRAELP-SGEVVAVKKFHSLLP-----CDQTVDQKEFLTE-----VEAFYGFCSH 648 (849)
Q Consensus 580 ~~~~~~~~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~~~~~e-----i~~~~~~~~~ 648 (849)
+.++....++|+..++||+|+||+||+|+.. +++.||||++.+... ......+...+.. +..+++++.+
T Consensus 66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 145 (437)
T 4aw2_A 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD 145 (437)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence 3445556789999999999999999999765 588999999864210 0011112222221 3347788889
Q ss_pred CCeeEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeec
Q 042123 649 ARHSFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFG 728 (849)
Q Consensus 649 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG 728 (849)
.+..|+||||+++|+|.+++.+.. ..+++.++..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 146 ~~~~~lV~Ey~~gg~L~~~l~~~~--~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DFG 220 (437)
T 4aw2_A 146 DNNLYLVMDYYVGGDLLTLLSKFE--DRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFG 220 (437)
T ss_dssp SSEEEEEECCCTTCBHHHHHHTTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred CCEEEEEEecCCCCcHHHHHHHcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcchh
Confidence 999999999999999999997532 3589999999999999999999999 99999999999999999999999999
Q ss_pred CCcccCCCCCC-eeeccCCcccccccccc-----CCCCCccchHHHHHHHHHHHHhCCCCCCcccccccccccccccccc
Q 042123 729 IAKSLKPDSSN-WTEFAGTCGYIAPELAY-----TMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQ 802 (849)
Q Consensus 729 ~a~~~~~~~~~-~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~ 802 (849)
+|+........ ....+||+.|+|||++. ...++.++|||||||++|||++|+.||........ .......
T Consensus 221 la~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~----~~~i~~~ 296 (437)
T 4aw2_A 221 SCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET----YGKIMNH 296 (437)
T ss_dssp TCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH----HHHHHTH
T ss_pred hhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHH----HHhhhhc
Confidence 99876544332 23467999999999987 56789999999999999999999999974332110 0011110
Q ss_pred ccCCCCCCCChhhHHHHHHHHHHHhhccCCCCCC--CCCHHHHHhh
Q 042123 803 MLDPRLPAPSRSAQEKLISIMEVAFSCFNESPES--RPTMKIISQQ 846 (849)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPt~~eil~~ 846 (849)
......+.... .....+.+++.+|+..+|++ ||+++|+++|
T Consensus 297 ~~~~~~p~~~~---~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 297 KERFQFPTQVT---DVSENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp HHHCCCCSSCC---CSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred cccccCCcccc---cCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 00111121100 11224778899999888888 9999999876
No 127
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=4.5e-36 Score=338.26 Aligned_cols=241 Identities=23% Similarity=0.427 Sum_probs=189.7
Q ss_pred HhcCCCcCceecCCccceEEEEEecCCcEEEEEEecccCCCCchhhHHHHHHHHHH-----------hhceeecCCeeEE
Q 042123 586 ATNDFDAKYCIGNGGHASVYRAELPSGEVVAVKKFHSLLPCDQTVDQKEFLTEVEA-----------FYGFCSHARHSFL 654 (849)
Q Consensus 586 ~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~~-----------~~~~~~~~~~~~l 654 (849)
..++|+..+.||+|+||.||+|.+.++..||||++.... ...+.+.+|+.. +++++. ....++
T Consensus 186 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~l 259 (454)
T 1qcf_A 186 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-----MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYI 259 (454)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-----BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEE
T ss_pred chHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-----ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEE
Confidence 446788899999999999999998888999999987532 224566777553 556665 567899
Q ss_pred EEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccC
Q 042123 655 LYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLK 734 (849)
Q Consensus 655 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~ 734 (849)
||||+++|+|.+++.... ...+++.++..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 260 v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~ 335 (454)
T 1qcf_A 260 ITEFMAKGSLLDFLKSDE-GSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIE 335 (454)
T ss_dssp EECCCTTCBHHHHHHSHH-HHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBC
T ss_pred EEeecCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcC
Confidence 999999999999997543 23589999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCC-CeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccC-CCCCCC
Q 042123 735 PDSS-NWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIK-GKHPRDFLSSISSSSLNTDVALDQMLD-PRLPAP 811 (849)
Q Consensus 735 ~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 811 (849)
.... ......++..|+|||.+....++.++|||||||++|||++ |+.||...... .....+.. .+.+.+
T Consensus 336 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~--------~~~~~i~~~~~~~~~ 407 (454)
T 1qcf_A 336 DNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP--------EVIRALERGYRMPRP 407 (454)
T ss_dssp CHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--------HHHHHHHHTCCCCCC
T ss_pred CCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHcCCCCCCC
Confidence 3211 1123346778999999998899999999999999999999 99999743321 11111111 122222
Q ss_pred ChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 812 SRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 812 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
... ...+.+++.+||+.||++|||+++|++.|+
T Consensus 408 ~~~----~~~l~~li~~cl~~dp~~RPt~~~i~~~L~ 440 (454)
T 1qcf_A 408 ENC----PEELYNIMMRCWKNRPEERPTFEYIQSVLD 440 (454)
T ss_dssp TTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCC----CHHHHHHHHHHccCChhHCcCHHHHHHHHH
Confidence 222 234788999999999999999999998875
No 128
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=6.1e-36 Score=324.93 Aligned_cols=238 Identities=22% Similarity=0.371 Sum_probs=179.1
Q ss_pred cCCCcCceecCCccceEEEEEecCCcEEEEEEecccCCCCchhhHHHHHHHHH-------------HhhceeecCCeeEE
Q 042123 588 NDFDAKYCIGNGGHASVYRAELPSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-------------AFYGFCSHARHSFL 654 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-------------~~~~~~~~~~~~~l 654 (849)
+.|++.+.||+|+||.||+|...+++.||||++..... .......+.+|+. .+++++......++
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l 86 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA--DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 86 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred CEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeecccc--chHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEE
Confidence 56889999999999999999888899999999865422 2222334444433 36677788889999
Q ss_pred EEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccC
Q 042123 655 LYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLK 734 (849)
Q Consensus 655 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~ 734 (849)
||| +.+|+|.+++... ..+++.++..++.||+.||+|||+. +|+||||||+||+++ ++.+||+|||+++...
T Consensus 87 v~e-~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~ 158 (343)
T 3dbq_A 87 VME-CGNIDLNSWLKKK---KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 158 (343)
T ss_dssp EEC-CCSEEHHHHHHHS---CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-
T ss_pred EEe-CCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccccC
Confidence 999 5678999999753 3589999999999999999999999 999999999999997 6889999999998765
Q ss_pred CCCC--CeeeccCCccccccccccC-----------CCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccc
Q 042123 735 PDSS--NWTEFAGTCGYIAPELAYT-----------MKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALD 801 (849)
Q Consensus 735 ~~~~--~~~~~~g~~~y~aPE~~~~-----------~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~ 801 (849)
.... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... ......
T Consensus 159 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-------~~~~~~ 231 (343)
T 3dbq_A 159 PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-------QISKLH 231 (343)
T ss_dssp -----------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCS-------HHHHHH
T ss_pred cccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhh-------HHHHHH
Confidence 4332 2345679999999999864 6789999999999999999999999974221 111122
Q ss_pred cccCCCCC--CCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 802 QMLDPRLP--APSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 802 ~~~~~~~~--~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
..+++... .+... ...+.+++.+||+.||++|||+.|++++
T Consensus 232 ~~~~~~~~~~~~~~~----~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 232 AIIDPNHEIEFPDIP----EKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp HHHCTTSCCCCCCCS----CHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHhcCCcccCCcccC----CHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 22222211 11111 1247789999999999999999999986
No 129
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=5.1e-36 Score=326.26 Aligned_cols=253 Identities=24% Similarity=0.276 Sum_probs=188.1
Q ss_pred HHHHhcCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCC-CCchhhHHHHHHHHH-----------HhhceeecC
Q 042123 583 IVKATNDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLP-CDQTVDQKEFLTEVE-----------AFYGFCSHA 649 (849)
Q Consensus 583 ~~~~~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~~~ei~-----------~~~~~~~~~ 649 (849)
+....++|+..+.||+|+||.||+|.. .+++.||+|++..... .......+.+.+|+. ++++++.+.
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 345668999999999999999999965 5788999999864311 111223345555544 377888888
Q ss_pred CeeEEEEEeccCCChhhhhccccc-------------------------------------ccCCCHHHHHHHHHHHHHH
Q 042123 650 RHSFLLYEFLERGSLAAILNTDAA-------------------------------------AQELGWSQRMNVIKAVAHA 692 (849)
Q Consensus 650 ~~~~lV~e~~~~gsL~~~l~~~~~-------------------------------------~~~l~~~~~~~i~~~ia~~ 692 (849)
+..++||||+++|+|.+++..... ...+++..+..++.||+.|
T Consensus 101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~ 180 (345)
T 3hko_A 101 QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA 180 (345)
T ss_dssp SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence 999999999999999999852110 1124577888999999999
Q ss_pred HHHHHhcCCCCeEecCCCCCCeeecCCC--cEEEeeecCCcccCCCCC----CeeeccCCccccccccccC--CCCCccc
Q 042123 693 LSYLHHDCFPPIVHRDISSKNLLLDLEY--EAHVADFGIAKSLKPDSS----NWTEFAGTCGYIAPELAYT--MKITEKC 764 (849)
Q Consensus 693 l~~LH~~~~~~ivH~dlk~~Nill~~~~--~~kl~DfG~a~~~~~~~~----~~~~~~g~~~y~aPE~~~~--~~~~~~~ 764 (849)
|+|||+. +|+||||||+||+++.++ .+||+|||+++.+..... ......||+.|+|||.+.+ ..++.++
T Consensus 181 l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 257 (345)
T 3hko_A 181 LHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKC 257 (345)
T ss_dssp HHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHH
T ss_pred HHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHH
Confidence 9999999 999999999999998776 899999999986533211 2345678999999999865 6788999
Q ss_pred hHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 042123 765 DVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIIS 844 (849)
Q Consensus 765 Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil 844 (849)
||||||+++|||++|+.||...... .....+.......+..........+.+++.+||+.||++|||+.|++
T Consensus 258 DiwslG~il~el~~g~~pf~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l 329 (345)
T 3hko_A 258 DAWSAGVLLHLLLMGAVPFPGVNDA--------DTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRAL 329 (345)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCCCCChH--------HHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHh
Confidence 9999999999999999999743321 12222222232222222222334588999999999999999999998
Q ss_pred hh
Q 042123 845 QQ 846 (849)
Q Consensus 845 ~~ 846 (849)
++
T Consensus 330 ~h 331 (345)
T 3hko_A 330 QH 331 (345)
T ss_dssp HS
T ss_pred cC
Confidence 86
No 130
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.6e-35 Score=319.90 Aligned_cols=236 Identities=19% Similarity=0.319 Sum_probs=187.4
Q ss_pred HhcCCCcCceecCCccceEEEEE-ecCCcEEEEEEecccCCCCc----------hhhHHHHHH-----HHHHhhceeecC
Q 042123 586 ATNDFDAKYCIGNGGHASVYRAE-LPSGEVVAVKKFHSLLPCDQ----------TVDQKEFLT-----EVEAFYGFCSHA 649 (849)
Q Consensus 586 ~~~~f~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~----------~~~~~~~~~-----ei~~~~~~~~~~ 649 (849)
..++|+..+.||+|+||.||+|. ..+++.||||++........ ...+...++ .+.++++++...
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 45789999999999999999996 45789999999875432111 111222222 234578888899
Q ss_pred CeeEEEEEeccCC-ChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeec
Q 042123 650 RHSFLLYEFLERG-SLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFG 728 (849)
Q Consensus 650 ~~~~lV~e~~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG 728 (849)
+..++||||+.+| +|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~~---~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg 175 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRHP---RLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFG 175 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTCC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCT
T ss_pred CEEEEEEEeCCCCccHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeecc
Confidence 9999999999877 9999986543 489999999999999999999999 99999999999999999999999999
Q ss_pred CCcccCCCCCCeeeccCCccccccccccCCCC-CccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCC
Q 042123 729 IAKSLKPDSSNWTEFAGTCGYIAPELAYTMKI-TEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPR 807 (849)
Q Consensus 729 ~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 807 (849)
+++...... ......||+.|+|||++.+..+ +.++||||||+++|||++|+.||..... .....
T Consensus 176 ~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--------------~~~~~ 240 (335)
T 3dls_A 176 SAAYLERGK-LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE--------------TVEAA 240 (335)
T ss_dssp TCEECCTTC-CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG--------------GTTTC
T ss_pred cceECCCCC-ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH--------------HHhhc
Confidence 998775443 3345679999999999988877 7899999999999999999999974221 11111
Q ss_pred CCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 808 LPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 808 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
...+.... ..+.+++.+||+.||++|||+++++++
T Consensus 241 ~~~~~~~~----~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 241 IHPPYLVS----KELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp CCCSSCCC----HHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred cCCCcccC----HHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 11111112 237889999999999999999999986
No 131
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=1.1e-35 Score=337.63 Aligned_cols=247 Identities=19% Similarity=0.297 Sum_probs=190.3
Q ss_pred cCCCcCceecCCccceEEEEEec-CCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeEEE
Q 042123 588 NDFDAKYCIGNGGHASVYRAELP-SGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSFLL 655 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~lV 655 (849)
++|...+.||+|+||.||+|+.. +|+.||+|++...... .......+..|+. .+++++......|+|
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~-~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLK-KRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhh-hhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 67888899999999999999764 6999999998643111 1111233444433 366777888899999
Q ss_pred EEeccCCChhhhhccccc-ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccC
Q 042123 656 YEFLERGSLAAILNTDAA-AQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLK 734 (849)
Q Consensus 656 ~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~ 734 (849)
|||+++|+|.+++..... ...+++.++..++.||+.||+|||+. +|+||||||+||+++.+|.+||+|||+++...
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 999999999999865432 34589999999999999999999999 99999999999999999999999999998876
Q ss_pred CCCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCChh
Q 042123 735 PDSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPAPSRS 814 (849)
Q Consensus 735 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 814 (849)
..........||+.|+|||++.+..++.++||||+||++|||++|+.||...... .........+.......+...
T Consensus 341 ~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~----~~~~~~~~~i~~~~~~~p~~~ 416 (543)
T 3c4z_A 341 AGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEK----VENKELKQRVLEQAVTYPDKF 416 (543)
T ss_dssp TTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCC----CCHHHHHHHHHHCCCCCCTTS
T ss_pred CCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccc----hhHHHHHHHHhhcccCCCccc
Confidence 5544445568999999999999999999999999999999999999999743211 011112222222222222222
Q ss_pred hHHHHHHHHHHHhhccCCCCCCCCCH-----HHHHhh
Q 042123 815 AQEKLISIMEVAFSCFNESPESRPTM-----KIISQQ 846 (849)
Q Consensus 815 ~~~~~~~l~~li~~cl~~dP~~RPt~-----~eil~~ 846 (849)
...+.+++.+||++||++||++ ++|++|
T Consensus 417 ----s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~H 449 (543)
T 3c4z_A 417 ----SPASKDFCEALLQKDPEKRLGFRDGSCDGLRTH 449 (543)
T ss_dssp ----CHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTS
T ss_pred ----CHHHHHHHHHhccCCHhHCCCCcccCHHHHHcC
Confidence 2347789999999999999965 677654
No 132
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=1.5e-35 Score=313.19 Aligned_cols=243 Identities=21% Similarity=0.325 Sum_probs=188.4
Q ss_pred hcCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeEE
Q 042123 587 TNDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSFL 654 (849)
Q Consensus 587 ~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~l 654 (849)
.++|+..+.||+|+||.||+|.. .+++.||+|++..... .......+.+|+. .+++++......++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 82 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL--SARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL 82 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccC--CHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEE
Confidence 46899999999999999999965 4689999999865422 2222344455543 36778888889999
Q ss_pred EEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCc---EEEeeecCCc
Q 042123 655 LYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYE---AHVADFGIAK 731 (849)
Q Consensus 655 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~---~kl~DfG~a~ 731 (849)
||||+++|+|.+.+... ..+++.++..++.|++.|++|||+. +|+||||||+||+++.++. +||+|||.+.
T Consensus 83 v~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~ 156 (284)
T 3kk8_A 83 VFDLVTGGELFEDIVAR---EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAI 156 (284)
T ss_dssp EECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeE
Confidence 99999999999888653 3589999999999999999999999 9999999999999987655 9999999998
Q ss_pred ccCCCCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCC
Q 042123 732 SLKPDSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPAP 811 (849)
Q Consensus 732 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (849)
..... .......|++.|+|||.+.+..++.++||||+|+++|+|++|+.||...... .....+.......+
T Consensus 157 ~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~--------~~~~~~~~~~~~~~ 227 (284)
T 3kk8_A 157 EVNDS-EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH--------RLYAQIKAGAYDYP 227 (284)
T ss_dssp ECCSS-CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHTCCCCC
T ss_pred EcccC-ccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh--------HHHHHHHhccccCC
Confidence 76543 2334567999999999999999999999999999999999999999643321 11111111111111
Q ss_pred ChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 812 SRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 812 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
..........+.+++.+||+.||++|||++|++++
T Consensus 228 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 228 SPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp TTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred chhhcccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 11111122347889999999999999999999886
No 133
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=2.1e-35 Score=313.65 Aligned_cols=240 Identities=23% Similarity=0.375 Sum_probs=191.4
Q ss_pred cCCCcCceecCCccceEEEEEec-CCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeEEE
Q 042123 588 NDFDAKYCIGNGGHASVYRAELP-SGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSFLL 655 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~lV 655 (849)
++|...+.||+|+||.||+|... +++.||+|.+...... .......+.+|+. ++++++.+.+..++|
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLL-KPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCC-SHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhcc-CHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 67889999999999999999664 6889999998654222 1223345555544 367888888999999
Q ss_pred EEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccCC
Q 042123 656 YEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLKP 735 (849)
Q Consensus 656 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~~ 735 (849)
|||+++++|.+++... ..+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.+.....
T Consensus 94 ~e~~~~~~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~ 167 (294)
T 2rku_A 94 LELCRRRSLLELHKRR---KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY 167 (294)
T ss_dssp EECCTTCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred EecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceeccc
Confidence 9999999999988643 3589999999999999999999999 999999999999999999999999999987764
Q ss_pred CCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCChhh
Q 042123 736 DSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPAPSRSA 815 (849)
Q Consensus 736 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 815 (849)
.........|++.|+|||.+.+..++.++||||+|+++|+|++|+.||...... .....+.......+....
T Consensus 168 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~~~~ 239 (294)
T 2rku_A 168 DGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK--------ETYLRIKKNEYSIPKHIN 239 (294)
T ss_dssp TTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHHHHTTCCCCCTTSC
T ss_pred CccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHhhccCCCccccC
Confidence 444455567899999999999888999999999999999999999999743211 111112222222222222
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 816 QEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 816 ~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
..+.+++.+||+.||++|||++|++++
T Consensus 240 ----~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 240 ----PVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp ----HHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ----HHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 247788999999999999999999986
No 134
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=5.8e-36 Score=318.12 Aligned_cols=248 Identities=24% Similarity=0.396 Sum_probs=182.8
Q ss_pred cCCCcCceecCCccceEEEEEe-----cCCcEEEEEEecccCCCCchhhHHHHHHHHHH-----------hhceeec--C
Q 042123 588 NDFDAKYCIGNGGHASVYRAEL-----PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVEA-----------FYGFCSH--A 649 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~~-----------~~~~~~~--~ 649 (849)
++|+..+.||+|+||+||+|++ .+++.||||++... .....+.+.+|+.. +++++.. .
T Consensus 10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 85 (295)
T 3ugc_A 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS----TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR 85 (295)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCC----CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHH
T ss_pred HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccC----CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCC
Confidence 6788999999999999999974 36889999998653 22334456666553 4455533 3
Q ss_pred CeeEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecC
Q 042123 650 RHSFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGI 729 (849)
Q Consensus 650 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~ 729 (849)
...++||||+++|+|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 86 ~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~ 160 (295)
T 3ugc_A 86 RNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGL 160 (295)
T ss_dssp TSCEEEEECCTTCBHHHHHHHCG--GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCS
T ss_pred CceEEEEEeCCCCCHHHHHHhcc--cccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCcc
Confidence 45899999999999999997543 3489999999999999999999998 999999999999999999999999999
Q ss_pred CcccCCCCC---CeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccc----cccc----ccc
Q 042123 730 AKSLKPDSS---NWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISS----SSLN----TDV 798 (849)
Q Consensus 730 a~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~----~~~~----~~~ 798 (849)
++....... ......++..|+|||.+.+..++.++||||||+++|||++|..||........ .... ...
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (295)
T 3ugc_A 161 TKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 240 (295)
T ss_dssp CC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHH
T ss_pred cccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHH
Confidence 987654322 12234567789999999999999999999999999999999999864321100 0000 000
Q ss_pred ccccccC-CCCCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 799 ALDQMLD-PRLPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 799 ~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
....... .+.+.+... ...+.+++.+||+.||++|||++|+++.|+
T Consensus 241 ~~~~~~~~~~~~~~~~~----~~~l~~li~~~l~~dp~~Rps~~el~~~L~ 287 (295)
T 3ugc_A 241 LIELLKNNGRLPRPDGC----PDEIYMIMTECWNNNVNQRPSFRDLALRVD 287 (295)
T ss_dssp HHHHHHTTCCCCCCTTC----CHHHHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHhccCcCCCCcCc----CHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 1111111 122222222 234888999999999999999999999874
No 135
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=1.2e-35 Score=334.13 Aligned_cols=236 Identities=25% Similarity=0.443 Sum_probs=184.7
Q ss_pred hcCCCcCceecCCccceEEEEEecCCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCC-eeEE
Q 042123 587 TNDFDAKYCIGNGGHASVYRAELPSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHAR-HSFL 654 (849)
Q Consensus 587 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~-~~~l 654 (849)
.++|+..+.||+|+||.||+|++. ++.||||.++... ..+.+.+|+. ++++++.... ..++
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~i 264 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA------TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI 264 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT------TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEE
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch------HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEE
Confidence 467888999999999999999885 7899999987542 2234555544 3566665544 7899
Q ss_pred EEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccC
Q 042123 655 LYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLK 734 (849)
Q Consensus 655 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~ 734 (849)
||||+++|+|.+++.... ...+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 265 v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 340 (450)
T 1k9a_A 265 VTEYMAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 340 (450)
T ss_dssp EEECCTTCBHHHHHHHHC-TTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEEecCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCccccc
Confidence 999999999999997543 23479999999999999999999999 99999999999999999999999999998653
Q ss_pred CCCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCC-CCCCCC
Q 042123 735 PDSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIK-GKHPRDFLSSISSSSLNTDVALDQMLDP-RLPAPS 812 (849)
Q Consensus 735 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 812 (849)
.. .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||...... .....+..+ +...+.
T Consensus 341 ~~---~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~--------~~~~~i~~~~~~~~p~ 409 (450)
T 1k9a_A 341 ST---QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--------DVVPRVEKGYKMDAPD 409 (450)
T ss_dssp ---------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTT--------THHHHHHTTCCCCCCT
T ss_pred cc---ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHcCCCCCCCC
Confidence 22 123367889999999999999999999999999999998 99999744321 111111111 122222
Q ss_pred hhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 813 RSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 813 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
.. ...+.+++.+||+.||++|||+.++++.|+
T Consensus 410 ~~----~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~ 441 (450)
T 1k9a_A 410 GC----PPAVYDVMKNCWHLDAATRPTFLQLREQLE 441 (450)
T ss_dssp TC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred cC----CHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 22 234788999999999999999999998874
No 136
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=1.3e-35 Score=327.29 Aligned_cols=238 Identities=21% Similarity=0.367 Sum_probs=180.5
Q ss_pred cCCCcCceecCCccceEEEEEecCCcEEEEEEecccCCCCchhhHHHHHHHHH-------------HhhceeecCCeeEE
Q 042123 588 NDFDAKYCIGNGGHASVYRAELPSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-------------AFYGFCSHARHSFL 654 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-------------~~~~~~~~~~~~~l 654 (849)
..|++.+.||+|+||.||+|...+++.||||++..... .......+.+|+. .+++++...+..++
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~l 133 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA--DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 133 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccc--cHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEE
Confidence 45899999999999999999888899999999865322 2222344445543 35667778888999
Q ss_pred EEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccC
Q 042123 655 LYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLK 734 (849)
Q Consensus 655 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~ 734 (849)
||| +.+++|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+|||++ ++.+||+|||+++.+.
T Consensus 134 v~E-~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~ 205 (390)
T 2zmd_A 134 VME-CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 205 (390)
T ss_dssp EEE-CCSEEHHHHHHHCS---SCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC-
T ss_pred EEe-cCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCcccccc
Confidence 999 66889999987543 589999999999999999999999 999999999999995 5899999999998765
Q ss_pred CCCC--CeeeccCCccccccccccC-----------CCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccc
Q 042123 735 PDSS--NWTEFAGTCGYIAPELAYT-----------MKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALD 801 (849)
Q Consensus 735 ~~~~--~~~~~~g~~~y~aPE~~~~-----------~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~ 801 (849)
.... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... ......
T Consensus 206 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~-------~~~~~~ 278 (390)
T 2zmd_A 206 PDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-------QISKLH 278 (390)
T ss_dssp --------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCC-------HHHHHH
T ss_pred CCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhH-------HHHHHH
Confidence 4322 2345679999999999865 4688999999999999999999999974321 111222
Q ss_pred cccCCCCCC--CChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 802 QMLDPRLPA--PSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 802 ~~~~~~~~~--~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
.++++.... +... ...+.+++.+||+.||++|||+.|++++
T Consensus 279 ~~~~~~~~~~~~~~~----~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 279 AIIDPNHEIEFPDIP----EKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp HHHCTTSCCCCCCCS----CHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHhCccccCCCCccc----hHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 233322211 1111 2247789999999999999999999976
No 137
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=2.2e-36 Score=323.86 Aligned_cols=244 Identities=23% Similarity=0.365 Sum_probs=178.7
Q ss_pred cCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHHHHH-----------hhceeecCC----e
Q 042123 588 NDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVEA-----------FYGFCSHAR----H 651 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~~-----------~~~~~~~~~----~ 651 (849)
++|++.+.||+|+||.||+|+. .+++.||||++...... .......+.+|+.. +++++.... .
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLAR-DPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTT-SHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred CcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccC-CHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 6899999999999999999965 67899999998764322 22334456666553 455554433 3
Q ss_pred eEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCc
Q 042123 652 SFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAK 731 (849)
Q Consensus 652 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~ 731 (849)
.++||||+++|+|.+++... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~ 164 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTE---GPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIAR 164 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC-
T ss_pred cEEEEecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCcc
Confidence 49999999999999999653 3589999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCC---CeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCC
Q 042123 732 SLKPDSS---NWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRL 808 (849)
Q Consensus 732 ~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 808 (849)
....... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||....... ..........
T Consensus 165 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~--------~~~~~~~~~~ 236 (311)
T 3ork_A 165 AIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS--------VAYQHVREDP 236 (311)
T ss_dssp -----------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH--------HHHHHHHCCC
T ss_pred cccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH--------HHHHHhcCCC
Confidence 7654322 1233568999999999999999999999999999999999999997433211 1111111111
Q ss_pred CCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 809 PAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 809 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
..+..........+.+++.+||+.||++||++.+++++
T Consensus 237 ~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~ 274 (311)
T 3ork_A 237 IPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRA 274 (311)
T ss_dssp CCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHH
T ss_pred CCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHH
Confidence 11111111123458889999999999999988877654
No 138
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.4e-35 Score=311.67 Aligned_cols=238 Identities=21% Similarity=0.306 Sum_probs=164.3
Q ss_pred cCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeEEE
Q 042123 588 NDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSFLL 655 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~lV 655 (849)
++|++.+.||+|+||.||+|.. .+++.||+|++....... ......+.+|+. ++++++.+.+..++|
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAK-SDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcch-HHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEE
Confidence 6899999999999999999965 578999999987543211 122334445543 367888888899999
Q ss_pred EEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccCC
Q 042123 656 YEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLKP 735 (849)
Q Consensus 656 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~~ 735 (849)
|||+ ++++.+++... ..+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 92 ~e~~-~~~l~~~~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 164 (275)
T 2eue_A 92 IEYA-GNELFDYIVQR---DKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 164 (275)
T ss_dssp EECC-CEEHHHHHHTS---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC-----
T ss_pred ehhc-CCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccceeccC
Confidence 9999 66888877543 3489999999999999999999999 999999999999999999999999999986654
Q ss_pred CCCCeeeccCCccccccccccCCCC-CccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCChh
Q 042123 736 DSSNWTEFAGTCGYIAPELAYTMKI-TEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPAPSRS 814 (849)
Q Consensus 736 ~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 814 (849)
.. ......||+.|+|||.+.+..+ +.++||||+|+++|||++|+.||...... .....+.......+...
T Consensus 165 ~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------~~~~~~~~~~~~~~~~~ 235 (275)
T 2eue_A 165 GN-FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP--------VLFKNISNGVYTLPKFL 235 (275)
T ss_dssp -----------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHTCCCCCTTS
T ss_pred cc-cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCCCCCCccC
Confidence 32 2344578999999999987765 78999999999999999999999743211 11111222222222222
Q ss_pred hHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 815 AQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 815 ~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
. ..+.+++.+||+.||++|||++|++++
T Consensus 236 ~----~~~~~li~~~l~~dP~~Rps~~e~l~h 263 (275)
T 2eue_A 236 S----PGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp C----HHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred C----HHHHHHHHHHhhcCHhHCCCHHHHhhC
Confidence 2 237789999999999999999999875
No 139
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=5.3e-35 Score=309.42 Aligned_cols=243 Identities=28% Similarity=0.446 Sum_probs=182.5
Q ss_pred cCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhh---HHHHHHHHHH-----------hhceeecCCee
Q 042123 588 NDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVD---QKEFLTEVEA-----------FYGFCSHARHS 652 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~---~~~~~~ei~~-----------~~~~~~~~~~~ 652 (849)
++|+..+.||+|+||+||+|+. .+++.||||++........... .+.+.+|+.. +++++....
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-- 96 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-- 96 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--
Confidence 6788999999999999999965 5799999999865432222111 1456666553 455554433
Q ss_pred EEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCCeeecCCCc-----EEEe
Q 042123 653 FLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPP--IVHRDISSKNLLLDLEYE-----AHVA 725 (849)
Q Consensus 653 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~--ivH~dlk~~Nill~~~~~-----~kl~ 725 (849)
++||||+++|+|.+++.... ..+++.++..++.|++.|++|||+. + |+||||||+||+++.++. +||+
T Consensus 97 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~kl~ 171 (287)
T 4f0f_A 97 RMVMEFVPCGDLYHRLLDKA--HPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAKVA 171 (287)
T ss_dssp EEEEECCTTCBHHHHHHCTT--SCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEEEC
T ss_pred eEEEEecCCCCHHHHHhccc--CCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEEeC
Confidence 79999999999999886543 4589999999999999999999998 7 999999999999988876 9999
Q ss_pred eecCCcccCCCCCCeeeccCCcccccccccc--CCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccc
Q 042123 726 DFGIAKSLKPDSSNWTEFAGTCGYIAPELAY--TMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQM 803 (849)
Q Consensus 726 DfG~a~~~~~~~~~~~~~~g~~~y~aPE~~~--~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~ 803 (849)
|||+++.... ......||+.|+|||.+. ...++.++||||+|+++|||++|+.||.......... ........
T Consensus 172 Dfg~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~--~~~~~~~~ 246 (287)
T 4f0f_A 172 DFGLSQQSVH---SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKF--INMIREEG 246 (287)
T ss_dssp CCTTCBCCSS---CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHH--HHHHHHSC
T ss_pred CCCccccccc---cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHH--HHHHhccC
Confidence 9999985432 345567999999999983 4567899999999999999999999997433211000 00000111
Q ss_pred cCCCCCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 804 LDPRLPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 804 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
..+..+ .. ....+.+++.+||+.||++|||++|+++.|+
T Consensus 247 ~~~~~~--~~----~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~ 285 (287)
T 4f0f_A 247 LRPTIP--ED----CPPRLRNVIELCWSGDPKKRPHFSYIVKELS 285 (287)
T ss_dssp CCCCCC--TT----SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCCC--cc----cCHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 111111 11 1234788999999999999999999999875
No 140
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=9.8e-36 Score=335.01 Aligned_cols=250 Identities=17% Similarity=0.291 Sum_probs=188.2
Q ss_pred cCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHHHH------HhhceeecCCeeEEEEEecc
Q 042123 588 NDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE------AFYGFCSHARHSFLLYEFLE 660 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~------~~~~~~~~~~~~~lV~e~~~ 660 (849)
++|++.+.||+|+||.||+|.. .+++.||||++...........+.+.++.+. .+..++......++||||+
T Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~- 85 (483)
T 3sv0_A 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL- 85 (483)
T ss_dssp TTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC-
T ss_pred CcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC-
Confidence 6899999999999999999965 6799999998765433333333333333322 2445666778899999999
Q ss_pred CCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeee---cCCCcEEEeeecCCcccCCCC
Q 042123 661 RGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLL---DLEYEAHVADFGIAKSLKPDS 737 (849)
Q Consensus 661 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~DfG~a~~~~~~~ 737 (849)
+++|.+++.... ..+++.+++.++.||+.||+|||+. +|+||||||+|||+ +.++.+||+|||+++.+....
T Consensus 86 g~sL~~ll~~~~--~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (483)
T 3sv0_A 86 GPSLEDLFNFCS--RKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTS 160 (483)
T ss_dssp CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTT
T ss_pred CCCHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCc
Confidence 999999996432 3599999999999999999999999 99999999999999 588999999999998765432
Q ss_pred CC-------eeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCC
Q 042123 738 SN-------WTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPA 810 (849)
Q Consensus 738 ~~-------~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (849)
.. .....||+.|+|||++.+..++.++|||||||++|||++|+.||......... .....+.......
T Consensus 161 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~-----~~~~~i~~~~~~~ 235 (483)
T 3sv0_A 161 THQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKK-----QKYEKISEKKVAT 235 (483)
T ss_dssp TCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHH-----HHHHHHHHHHHHS
T ss_pred cccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHH-----HHHHHHhhccccc
Confidence 21 22567999999999999999999999999999999999999999754321110 0011110000000
Q ss_pred C-ChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 811 P-SRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 811 ~-~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
. ...+.....++.+++..||+.+|++||++++|++.|+
T Consensus 236 ~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~ 274 (483)
T 3sv0_A 236 SIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFR 274 (483)
T ss_dssp CHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHH
T ss_pred cHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 0 0000111235889999999999999999999998774
No 141
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=1.5e-35 Score=311.88 Aligned_cols=240 Identities=21% Similarity=0.307 Sum_probs=189.2
Q ss_pred hcCCCcCceecCCccceEEEEEec-CCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeEE
Q 042123 587 TNDFDAKYCIGNGGHASVYRAELP-SGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSFL 654 (849)
Q Consensus 587 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~l 654 (849)
.++|+..+.||+|+||.||+|... ++..||+|++...... ....+.+|+. .+++++......++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVE----DVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYL 83 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCS----CHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccc----hHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEE
Confidence 467999999999999999999654 5789999998754322 2344555544 36778888899999
Q ss_pred EEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeee---cCCCcEEEeeecCCc
Q 042123 655 LYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLL---DLEYEAHVADFGIAK 731 (849)
Q Consensus 655 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~DfG~a~ 731 (849)
||||+++++|.+++... ..+++.++..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||++.
T Consensus 84 v~e~~~~~~L~~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~ 157 (277)
T 3f3z_A 84 VMELCTGGELFERVVHK---RVFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAA 157 (277)
T ss_dssp EEECCCSCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEeccCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccce
Confidence 99999999999988653 3489999999999999999999999 99999999999999 788999999999998
Q ss_pred ccCCCCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCC
Q 042123 732 SLKPDSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPAP 811 (849)
Q Consensus 732 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (849)
...... ......+|+.|+|||.+.+. ++.++||||+|+++|||++|+.||..... ......+.......+
T Consensus 158 ~~~~~~-~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~--------~~~~~~~~~~~~~~~ 227 (277)
T 3f3z_A 158 RFKPGK-MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTD--------SEVMLKIREGTFTFP 227 (277)
T ss_dssp ECCTTS-CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHCCCCCC
T ss_pred eccCcc-chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCH--------HHHHHHHHhCCCCCC
Confidence 765432 33456799999999987654 89999999999999999999999974321 112222222232222
Q ss_pred ChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 812 SRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 812 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
..........+.+++.+||+.||++|||+.+++++
T Consensus 228 ~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 262 (277)
T 3f3z_A 228 EKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEH 262 (277)
T ss_dssp HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred chhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 22111233458899999999999999999999875
No 142
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=7.9e-36 Score=324.53 Aligned_cols=247 Identities=23% Similarity=0.436 Sum_probs=191.5
Q ss_pred HHhcCCCcCceecCCccceEEEEEec------CCcEEEEEEecccCCCCchhhHHHHHHHHH-----------Hhhceee
Q 042123 585 KATNDFDAKYCIGNGGHASVYRAELP------SGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCS 647 (849)
Q Consensus 585 ~~~~~f~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~ 647 (849)
...++|+..+.||+|+||.||+|+.. +++.||||.+.... .......+.+|+. .+++++.
T Consensus 44 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~ 120 (343)
T 1luf_A 44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA---SADMQADFQREAALMAEFDNPNIVKLLGVCA 120 (343)
T ss_dssp CCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC---CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred ecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc---CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc
Confidence 34578999999999999999999764 34889999987542 2233445666655 3677888
Q ss_pred cCCeeEEEEEeccCCChhhhhccccc---------------------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEe
Q 042123 648 HARHSFLLYEFLERGSLAAILNTDAA---------------------AQELGWSQRMNVIKAVAHALSYLHHDCFPPIVH 706 (849)
Q Consensus 648 ~~~~~~lV~e~~~~gsL~~~l~~~~~---------------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH 706 (849)
..+..++||||+++|+|.+++..... ...+++.+++.++.||+.||+|||+. +|+|
T Consensus 121 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH 197 (343)
T 1luf_A 121 VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVH 197 (343)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCC
T ss_pred cCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---Ceec
Confidence 88899999999999999999965321 14689999999999999999999999 9999
Q ss_pred cCCCCCCeeecCCCcEEEeeecCCcccCCCC--CCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCC
Q 042123 707 RDISSKNLLLDLEYEAHVADFGIAKSLKPDS--SNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIK-GKHPR 783 (849)
Q Consensus 707 ~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~t-g~~Pf 783 (849)
|||||+||+++.++.+||+|||+++...... .......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||
T Consensus 198 ~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~ 277 (343)
T 1luf_A 198 RDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPY 277 (343)
T ss_dssp SCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred CCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcC
Confidence 9999999999999999999999997654322 12234567889999999998899999999999999999999 99998
Q ss_pred CccccccccccccccccccccCCCCCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 784 DFLSSISSSSLNTDVALDQMLDPRLPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 784 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
..... ......+.+......+.. ....+.+++.+||+.||++|||+.+++++|+
T Consensus 278 ~~~~~--------~~~~~~~~~~~~~~~~~~---~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~ 331 (343)
T 1luf_A 278 YGMAH--------EEVIYYVRDGNILACPEN---CPLELYNLMRLCWSKLPADRPSFCSIHRILQ 331 (343)
T ss_dssp TTSCH--------HHHHHHHHTTCCCCCCTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCh--------HHHHHHHhCCCcCCCCCC---CCHHHHHHHHHHcccCcccCCCHHHHHHHHH
Confidence 74322 111222222222211111 1234788999999999999999999999875
No 143
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=1.8e-35 Score=322.83 Aligned_cols=242 Identities=22% Similarity=0.288 Sum_probs=176.4
Q ss_pred hcCCCcCceecCCccceEEEEEec-CCcEEEEEEecccCCCCchhhHHHHHHHH-----------HHhhceeecCCeeEE
Q 042123 587 TNDFDAKYCIGNGGHASVYRAELP-SGEVVAVKKFHSLLPCDQTVDQKEFLTEV-----------EAFYGFCSHARHSFL 654 (849)
Q Consensus 587 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~ei-----------~~~~~~~~~~~~~~l 654 (849)
.++|+..+.||+|+||+||+|+.. +++.||||++....... ..+.+|+ .++++++......++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-----~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 93 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAID-----ENVQREIINHRSLRHPNIVRFKEVILTPTHLAI 93 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSC-----HHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcccc-----HHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEE
Confidence 368999999999999999999664 79999999987542221 2233333 347788888899999
Q ss_pred EEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCc--EEEeeecCCcc
Q 042123 655 LYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYE--AHVADFGIAKS 732 (849)
Q Consensus 655 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~--~kl~DfG~a~~ 732 (849)
||||+++|+|.+++... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||+++.
T Consensus 94 v~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~ 167 (361)
T 3uc3_A 94 IMEYASGGELYERICNA---GRFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKS 167 (361)
T ss_dssp EEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC--
T ss_pred EEEeCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCcccc
Confidence 99999999999998643 3589999999999999999999999 9999999999999987765 99999999975
Q ss_pred cCCCCCCeeeccCCccccccccccCCCCCcc-chHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCC
Q 042123 733 LKPDSSNWTEFAGTCGYIAPELAYTMKITEK-CDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPAP 811 (849)
Q Consensus 733 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~-~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (849)
.... .......||+.|+|||++.+..++.+ +||||+||++|+|++|+.||....... ........+.......+
T Consensus 168 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~----~~~~~~~~~~~~~~~~~ 242 (361)
T 3uc3_A 168 SVLH-SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR----DYRKTIQRILSVKYSIP 242 (361)
T ss_dssp --------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CC----CHHHHHHHHHTTCCCCC
T ss_pred cccc-CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHH----HHHHHHHHHhcCCCCCC
Confidence 4332 22344679999999999988887655 899999999999999999997433211 11111222222222111
Q ss_pred ChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 812 SRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 812 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
... .....+.+++.+||+.||++|||++|+++|
T Consensus 243 ~~~--~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 243 DDI--RISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp TTS--CCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred CcC--CCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 100 112347789999999999999999999986
No 144
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=1.7e-35 Score=317.64 Aligned_cols=245 Identities=22% Similarity=0.415 Sum_probs=189.7
Q ss_pred hcCCCcCceecCCccceEEEEEe------cCCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecC
Q 042123 587 TNDFDAKYCIGNGGHASVYRAEL------PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHA 649 (849)
Q Consensus 587 ~~~f~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~ 649 (849)
.++|...+.||+|+||.||+|.. .+++.||||.+.... .....+.+.+|+. ++++++.+.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 98 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA---SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQD 98 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCC---CHHHHHHHHHHHHHHhhCCCCceeeEEEEEecC
Confidence 36788899999999999999964 345889999987532 2233455666655 367788888
Q ss_pred CeeEEEEEeccCCChhhhhccccc---------------------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecC
Q 042123 650 RHSFLLYEFLERGSLAAILNTDAA---------------------AQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRD 708 (849)
Q Consensus 650 ~~~~lV~e~~~~gsL~~~l~~~~~---------------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~d 708 (849)
+..++||||+++|+|.+++..... ...+++.++..++.||+.||+|||+. +|+|||
T Consensus 99 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~d 175 (314)
T 2ivs_A 99 GPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRD 175 (314)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCC
T ss_pred CceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccc
Confidence 899999999999999999975432 12488999999999999999999999 999999
Q ss_pred CCCCCeeecCCCcEEEeeecCCcccCCCCCC--eeeccCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCc
Q 042123 709 ISSKNLLLDLEYEAHVADFGIAKSLKPDSSN--WTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIK-GKHPRDF 785 (849)
Q Consensus 709 lk~~Nill~~~~~~kl~DfG~a~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~t-g~~Pf~~ 785 (849)
|||+||+++.++.+||+|||+++........ .....+++.|+|||.+.+..++.++||||+|+++|||++ |+.||..
T Consensus 176 ikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~ 255 (314)
T 2ivs_A 176 LAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPG 255 (314)
T ss_dssp CSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred cchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 9999999999999999999999876543321 223456788999999998889999999999999999999 9999974
Q ss_pred cccccccccccccccccccCCCCCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 786 LSSISSSSLNTDVALDQMLDPRLPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 786 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
.... .....+.......... .....+.+++.+||+.||++|||++|++++|+
T Consensus 256 ~~~~--------~~~~~~~~~~~~~~~~---~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~ 307 (314)
T 2ivs_A 256 IPPE--------RLFNLLKTGHRMERPD---NCSEEMYRLMLQCWKQEPDKRPVFADISKDLE 307 (314)
T ss_dssp CCGG--------GHHHHHHTTCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCHH--------HHHHHhhcCCcCCCCc---cCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 3321 1111111111111111 11234788999999999999999999999875
No 145
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=1.5e-34 Score=337.67 Aligned_cols=311 Identities=19% Similarity=0.191 Sum_probs=196.8
Q ss_pred CCCCCEEeCcCCccccCCCccccCCCCCCEeeCCCCcCcccccccccccCCCCCccccCeEeccCCcccccCCccCCCCC
Q 042123 29 FPHLAYLDLTWNGFFGTIPPQISNLSNLRYLYLGSNQFSGNILAEVSSESSGGNLRYMSRLVINDNSLSGFIPPHIGNLK 108 (849)
Q Consensus 29 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 108 (849)
+++++.|++++|.+..+++..|.++++|++|+|++|++++. ....|+.+++|+.|+|++|.|++..|..|++++
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~------~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 123 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEI------DTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVP 123 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEE------CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred CCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCC------ChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCC
Confidence 46677777777777777777777777777777777776531 222344445555555555555444444444445
Q ss_pred CCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEEcCCCcccccCCcCCCCCCCCCEEEcc
Q 042123 109 FLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLNDNQLIGYIPRPFSNLTSVSTLRLS 188 (849)
Q Consensus 109 ~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 188 (849)
+|++|+|++|+|+++++..| +++++|++|+|++|.+.++.|..|..+++|++|+|+
T Consensus 124 ~L~~L~L~~n~l~~l~~~~~------------------------~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 179 (597)
T 3oja_B 124 LLTVLVLERNDLSSLPRGIF------------------------HNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLS 179 (597)
T ss_dssp TCCEEECCSSCCCCCCTTTT------------------------TTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECT
T ss_pred CCCEEEeeCCCCCCCCHHHh------------------------ccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECc
Confidence 55555555554444444444 445555555555555554444455555555555555
Q ss_pred CCCCcCcCcccccCCCCCCEEeccCCcCccCCCcCccCccccchhhhccccccCCCCcchhhhhhhhhhccCcCCCCCCC
Q 042123 189 RNDLFGSIPDEIGKMRSLSVLDLNQNQFKGVLPPSISNLTNLKELALLYNHLSGSIPPSLGNLILRQLLLSGNHFTGYLP 268 (849)
Q Consensus 189 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~L~~n~i~~~~~ 268 (849)
+|++++.. +..+++|+.|++++|.+++. ...++|++|++++|.+.. +|..
T Consensus 180 ~N~l~~~~---~~~l~~L~~L~l~~n~l~~l-----~~~~~L~~L~ls~n~l~~-~~~~--------------------- 229 (597)
T 3oja_B 180 SNRLTHVD---LSLIPSLFHANVSYNLLSTL-----AIPIAVEELDASHNSINV-VRGP--------------------- 229 (597)
T ss_dssp TSCCSBCC---GGGCTTCSEEECCSSCCSEE-----ECCTTCSEEECCSSCCCE-EECS---------------------
T ss_pred CCCCCCcC---hhhhhhhhhhhcccCccccc-----cCCchhheeeccCCcccc-cccc---------------------
Confidence 55554321 33344555555555555421 222344455555554431 1100
Q ss_pred cccCCCCCcceeeecccccccccCCCCCCcccccEEEccCccccCchhhhhCCCCCCCEEeccCccccCcccccCCCCCC
Q 042123 269 YNICRGGALEIFTVSENHFQGTIPTSLRNCTSLIRVRLNGNNLTGNISEALGIYPNLTFIDLSRNNFYGEISSNWGKFPK 348 (849)
Q Consensus 269 ~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 348 (849)
..++|+.|++++|.+++ +..+..+++|+.|+|++|.+++..|..|..+++|+.|+|++|.+.+ +|..+..+++
T Consensus 230 ----~~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~ 302 (597)
T 3oja_B 230 ----VNVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPT 302 (597)
T ss_dssp ----CCSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTT
T ss_pred ----cCCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCC
Confidence 01245666666666654 3567778888888888888888888888888888888888888885 4666777889
Q ss_pred CcEEeccCCccccCCCCCccccccccccccccccccccCchhhcCCCCCcEEEccCcccccc
Q 042123 349 LGTLNVSMNNITGGLPREIGNSSQLQAFDLSLNHIVGEIPKELGKLNPLTKLILRGNQITGR 410 (849)
Q Consensus 349 L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~ 410 (849)
|+.|+|++|.++ .+|..+..+++|+.|+|++|.+++. + +..+++|+.|+|++|++.+.
T Consensus 303 L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~-~--~~~~~~L~~L~l~~N~~~~~ 360 (597)
T 3oja_B 303 LKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCN 360 (597)
T ss_dssp CCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHH
T ss_pred CcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCc-C--hhhcCCCCEEEeeCCCCCCh
Confidence 999999999998 6777888899999999999999854 3 67788999999999998753
No 146
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=2.8e-35 Score=322.06 Aligned_cols=252 Identities=23% Similarity=0.382 Sum_probs=191.8
Q ss_pred HHHHHHHhcCCCcCceecCCccceEEEEEec-CCcEEEEEEecccCCCCch----hhHHHHHHHHH------------Hh
Q 042123 580 YDEIVKATNDFDAKYCIGNGGHASVYRAELP-SGEVVAVKKFHSLLPCDQT----VDQKEFLTEVE------------AF 642 (849)
Q Consensus 580 ~~~~~~~~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~----~~~~~~~~ei~------------~~ 642 (849)
........++|+..+.||+|+||.||+|... +|+.||||++......... ...+.+.+|+. .+
T Consensus 86 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 165 (365)
T 2y7j_A 86 WAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITL 165 (365)
T ss_dssp HHHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCE
T ss_pred chhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence 3444555678999999999999999999764 7999999998654321111 11223333332 35
Q ss_pred hceeecCCeeEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcE
Q 042123 643 YGFCSHARHSFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEA 722 (849)
Q Consensus 643 ~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~ 722 (849)
++++......++||||+++|+|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+
T Consensus 166 ~~~~~~~~~~~lv~e~~~g~~L~~~l~~~---~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~i 239 (365)
T 2y7j_A 166 IDSYESSSFMFLVFDLMRKGELFDYLTEK---VALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQI 239 (365)
T ss_dssp EEEEEBSSEEEEEECCCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCE
T ss_pred EEEEeeCCEEEEEEEeCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCE
Confidence 67788888999999999999999998643 3589999999999999999999998 99999999999999999999
Q ss_pred EEeeecCCcccCCCCCCeeeccCCccccccccccC------CCCCccchHHHHHHHHHHHHhCCCCCCcccccccccccc
Q 042123 723 HVADFGIAKSLKPDSSNWTEFAGTCGYIAPELAYT------MKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNT 796 (849)
Q Consensus 723 kl~DfG~a~~~~~~~~~~~~~~g~~~y~aPE~~~~------~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~ 796 (849)
|++|||++....... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......
T Consensus 240 kl~DfG~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~------- 311 (365)
T 2y7j_A 240 RLSDFGFSCHLEPGE-KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQI------- 311 (365)
T ss_dssp EECCCTTCEECCTTC-CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-------
T ss_pred EEEecCcccccCCCc-ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHH-------
Confidence 999999998765432 3345689999999998863 35888999999999999999999999743211
Q ss_pred ccccccccCCCCCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 797 DVALDQMLDPRLPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
.....+...........+......+.+++.+||+.||++|||++|++++
T Consensus 312 -~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 312 -LMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp -HHHHHHHHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred -HHHHHHHhCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1111111222211111111223458889999999999999999999986
No 147
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.9e-36 Score=325.06 Aligned_cols=245 Identities=22% Similarity=0.404 Sum_probs=186.1
Q ss_pred HhcCCCcCceecCCccceEEEEEe------cCCcEEEEEEecccCCCCchhhHHHHHHHHH------------Hhhceee
Q 042123 586 ATNDFDAKYCIGNGGHASVYRAEL------PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE------------AFYGFCS 647 (849)
Q Consensus 586 ~~~~f~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~------------~~~~~~~ 647 (849)
..++|+..+.||+|+||.||+|+. .++..||||.+...... .....+.+|+. .+++++.
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 119 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADS---SEREALMSELKMMTQLGSHENIVNLLGACT 119 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC---------CHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCH---HHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence 457889999999999999999975 24668999998753211 11223334433 3677788
Q ss_pred cCCeeEEEEEeccCCChhhhhccccc--------------------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEec
Q 042123 648 HARHSFLLYEFLERGSLAAILNTDAA--------------------AQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHR 707 (849)
Q Consensus 648 ~~~~~~lV~e~~~~gsL~~~l~~~~~--------------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~ 707 (849)
..+..++||||+++|+|.+++..... ...+++.++..++.||+.||+|||+. +|+||
T Consensus 120 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~ 196 (344)
T 1rjb_A 120 LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHR 196 (344)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEET
T ss_pred eCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccC
Confidence 88899999999999999999975432 13479999999999999999999999 99999
Q ss_pred CCCCCCeeecCCCcEEEeeecCCcccCCCCCC--eeeccCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCC
Q 042123 708 DISSKNLLLDLEYEAHVADFGIAKSLKPDSSN--WTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIK-GKHPRD 784 (849)
Q Consensus 708 dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~t-g~~Pf~ 784 (849)
||||+||+++.++.+||+|||++......... .....+|+.|+|||.+.+..++.++||||||+++|||+| |..||.
T Consensus 197 Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~ 276 (344)
T 1rjb_A 197 DLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYP 276 (344)
T ss_dssp TCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSST
T ss_pred CCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcc
Confidence 99999999999999999999999876543322 223456789999999998899999999999999999998 999997
Q ss_pred ccccccccccccccccccccCCC--CCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 785 FLSSISSSSLNTDVALDQMLDPR--LPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 785 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
...... .....+... ...+... ...+.+++.+||+.||++|||+.+++++|+
T Consensus 277 ~~~~~~--------~~~~~~~~~~~~~~~~~~----~~~l~~li~~~l~~dp~~Rps~~~l~~~l~ 330 (344)
T 1rjb_A 277 GIPVDA--------NFYKLIQNGFKMDQPFYA----TEEIYIIMQSCWAFDSRKRPSFPNLTSFLG 330 (344)
T ss_dssp TCCCSH--------HHHHHHHTTCCCCCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred cCCcHH--------HHHHHHhcCCCCCCCCCC----CHHHHHHHHHHcCCCchhCcCHHHHHHHHH
Confidence 433211 111111111 1111111 234788999999999999999999999885
No 148
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=1.1e-35 Score=313.39 Aligned_cols=239 Identities=26% Similarity=0.411 Sum_probs=184.1
Q ss_pred hcCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeEE
Q 042123 587 TNDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSFL 654 (849)
Q Consensus 587 ~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~l 654 (849)
.++|+..+.||+|+||.||+|.. .+++.||||++..... ........+.+|+. .+++++......++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 86 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL-EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 86 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHH-HHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEecccc-chhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence 46789999999999999999955 4678999999854211 11112334455544 36788888899999
Q ss_pred EEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccC
Q 042123 655 LYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLK 734 (849)
Q Consensus 655 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~ 734 (849)
||||+++|+|.+++... ..+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 87 v~e~~~~~~l~~~l~~~---~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~ 160 (279)
T 3fdn_A 87 ILEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP 160 (279)
T ss_dssp EECCCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC-
T ss_pred EEecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccCC
Confidence 99999999999998653 3589999999999999999999998 99999999999999999999999999986544
Q ss_pred CCCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCChh
Q 042123 735 PDSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPAPSRS 814 (849)
Q Consensus 735 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 814 (849)
.. ......|++.|+|||.+.+..++.++||||+|+++|+|++|+.||...... .....+.......+...
T Consensus 161 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~~~ 230 (279)
T 3fdn_A 161 SS--RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ--------ETYKRISRVEFTFPDFV 230 (279)
T ss_dssp ---------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHHHHHTCCCCCTTS
T ss_pred cc--cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHH--------HHHHHHHhCCCCCCCcC
Confidence 32 234567899999999999999999999999999999999999999743211 11111111122211111
Q ss_pred hHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 815 AQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 815 ~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
. ..+.+++.+||+.||++|||++|+++|
T Consensus 231 ~----~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 231 T----EGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp C----HHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred C----HHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 2 237789999999999999999999986
No 149
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=3.8e-36 Score=329.36 Aligned_cols=249 Identities=18% Similarity=0.259 Sum_probs=181.5
Q ss_pred hcCCCcCceecCCccceEEEEEecC------CcEEEEEEecccCCCCchhhHHHHHH---------H-----------HH
Q 042123 587 TNDFDAKYCIGNGGHASVYRAELPS------GEVVAVKKFHSLLPCDQTVDQKEFLT---------E-----------VE 640 (849)
Q Consensus 587 ~~~f~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~~~---------e-----------i~ 640 (849)
.++|++.+.||+|+||.||+|.+.. ++.||||.+..... ....+..+.+ + +.
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv 111 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNG--PLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVP 111 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCH--HHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSC
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccch--hHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCC
Confidence 4589999999999999999997654 47899999865421 1111112221 1 11
Q ss_pred HhhceeecC----CeeEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeee
Q 042123 641 AFYGFCSHA----RHSFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLL 716 (849)
Q Consensus 641 ~~~~~~~~~----~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill 716 (849)
.+++++... ...++||||+ +|+|.+++.... ..+++.++..++.||+.||+|||+. +|+||||||+||++
T Consensus 112 ~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~--~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill 185 (364)
T 3op5_A 112 KYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANA--KRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLL 185 (364)
T ss_dssp CEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEE
T ss_pred eEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEE
Confidence 245555443 4589999999 999999996532 4599999999999999999999999 99999999999999
Q ss_pred c--CCCcEEEeeecCCcccCCCCC-------CeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccc
Q 042123 717 D--LEYEAHVADFGIAKSLKPDSS-------NWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLS 787 (849)
Q Consensus 717 ~--~~~~~kl~DfG~a~~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~ 787 (849)
+ .++.+||+|||+++.+..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 186 ~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~ 265 (364)
T 3op5_A 186 NYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNL 265 (364)
T ss_dssp ESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGT
T ss_pred ecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccc
Confidence 9 889999999999976643221 1233459999999999999999999999999999999999999997432
Q ss_pred cccccc----cccccccccccCCCCCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 788 SISSSS----LNTDVALDQMLDPRLPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 788 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
...... .........++++.++. .. ....+.+++..||+.+|++|||+++|++.|+
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~ 325 (364)
T 3op5_A 266 KDPKYVRDSKIRYRENIASLMDKCFPA-AN----APGEIAKYMETVKLLDYTEKPLYENLRDILL 325 (364)
T ss_dssp TCHHHHHHHHHHHHHCHHHHHHHHSCT-TC----CCHHHHHHHHHHHTCCTTCCCCHHHHHHHHH
T ss_pred cCHHHHHHHHHHhhhhHHHHHHHhccc-cc----CHHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence 111000 00001111111111110 01 1234788999999999999999999998774
No 150
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=2.4e-35 Score=319.12 Aligned_cols=240 Identities=23% Similarity=0.375 Sum_probs=190.8
Q ss_pred cCCCcCceecCCccceEEEEEec-CCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeEEE
Q 042123 588 NDFDAKYCIGNGGHASVYRAELP-SGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSFLL 655 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~lV 655 (849)
++|...+.||+|+||.||+|... +++.||+|.+...... .......+.+|+. ++++++.+.+..++|
T Consensus 41 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 41 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLL-KPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCC-SHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhc-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 67888999999999999999654 6889999998654221 1223444555544 367888888999999
Q ss_pred EEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccCC
Q 042123 656 YEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLKP 735 (849)
Q Consensus 656 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~~ 735 (849)
|||+++++|.+++... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 120 ~e~~~~~~L~~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 193 (335)
T 2owb_A 120 LELCRRRSLLELHKRR---KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY 193 (335)
T ss_dssp ECCCTTCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred EecCCCCCHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceeccc
Confidence 9999999999988643 3589999999999999999999999 999999999999999999999999999987765
Q ss_pred CCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCChhh
Q 042123 736 DSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPAPSRSA 815 (849)
Q Consensus 736 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 815 (849)
.........|++.|+|||.+.+..++.++||||||+++|||++|+.||...... .....+.......+....
T Consensus 194 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------~~~~~~~~~~~~~~~~~~ 265 (335)
T 2owb_A 194 DGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK--------ETYLRIKKNEYSIPKHIN 265 (335)
T ss_dssp TTCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHHHHHTCCCCCTTSC
T ss_pred CcccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHH--------HHHHHHhcCCCCCCccCC
Confidence 444455567999999999999988999999999999999999999999743211 111111111111111111
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 816 QEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 816 ~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
..+.+++.+||+.||++|||++|++++
T Consensus 266 ----~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 266 ----PVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp ----HHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ----HHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 237788999999999999999999875
No 151
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=2.2e-35 Score=318.03 Aligned_cols=246 Identities=23% Similarity=0.434 Sum_probs=173.9
Q ss_pred HhcCCCcCceecCCccceEEEEEecC-C---cEEEEEEecccCCCCchhhHHHHHHHHHH-----------hhceeecCC
Q 042123 586 ATNDFDAKYCIGNGGHASVYRAELPS-G---EVVAVKKFHSLLPCDQTVDQKEFLTEVEA-----------FYGFCSHAR 650 (849)
Q Consensus 586 ~~~~f~~~~~lG~G~~g~Vy~~~~~~-~---~~vavK~~~~~~~~~~~~~~~~~~~ei~~-----------~~~~~~~~~ 650 (849)
..++|+..+.||+|+||.||+|+... + ..||||.+..... .....+.+.+|+.. +++++....
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 98 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADII--ASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSR 98 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC--------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEeccccc--CHHHHHHHHHHHHHHHHCCCCceehhhceeeccc
Confidence 34689999999999999999997653 3 2799999865422 12234566666553 556665554
Q ss_pred ee------EEEEEeccCCChhhhhccccc---ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCc
Q 042123 651 HS------FLLYEFLERGSLAAILNTDAA---AQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYE 721 (849)
Q Consensus 651 ~~------~lV~e~~~~gsL~~~l~~~~~---~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~ 721 (849)
.. ++||||+++|+|.+++..... ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.
T Consensus 99 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~ 175 (323)
T 3qup_A 99 AKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMT 175 (323)
T ss_dssp ------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSC
T ss_pred cccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCC
Confidence 44 899999999999999965432 12589999999999999999999999 9999999999999999999
Q ss_pred EEEeeecCCcccCCCCC--CeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCcccccccccccccc
Q 042123 722 AHVADFGIAKSLKPDSS--NWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIK-GKHPRDFLSSISSSSLNTDV 798 (849)
Q Consensus 722 ~kl~DfG~a~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~t-g~~Pf~~~~~~~~~~~~~~~ 798 (849)
+||+|||+++....... ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||...... .
T Consensus 176 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--------~ 247 (323)
T 3qup_A 176 VCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENA--------E 247 (323)
T ss_dssp EEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--------G
T ss_pred EEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChH--------H
Confidence 99999999987654322 1223456788999999999999999999999999999999 99998743321 1
Q ss_pred ccccccCCC-CCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 799 ALDQMLDPR-LPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 799 ~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
....+.... ...+... ...+.+++.+||+.||++|||+.++++.|+
T Consensus 248 ~~~~~~~~~~~~~~~~~----~~~l~~li~~~l~~dp~~Rps~~~l~~~l~ 294 (323)
T 3qup_A 248 IYNYLIGGNRLKQPPEC----MEEVYDLMYQCWSADPKQRPSFTCLRMELE 294 (323)
T ss_dssp HHHHHHTTCCCCCCTTC----CHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHhcCCCCCCCCcc----CHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 112222221 1111222 234788999999999999999999888764
No 152
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=4.2e-37 Score=328.35 Aligned_cols=242 Identities=25% Similarity=0.394 Sum_probs=169.1
Q ss_pred cCCCcCceecCCccceEEEEEecCCcEEEEEEecccCCCCchhhHHHHHHHHH-------------HhhceeecCC----
Q 042123 588 NDFDAKYCIGNGGHASVYRAELPSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-------------AFYGFCSHAR---- 650 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-------------~~~~~~~~~~---- 650 (849)
++|...+.||+|+||.||+|+.. ++.||||++.... ...+.+|.+ .+++++....
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~-------~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 74 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSRE-------ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWT 74 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-TT-------HHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSE
T ss_pred ceeeehhhccCCCCeEEEEEEEc-CcceEEEEecccc-------hhhHHHHHHHHHHHhccCcceeeeeeecccCCCccc
Confidence 67999999999999999999875 8999999986431 122333322 3556665554
Q ss_pred eeEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCeEecCCCCCCeeecCCCcE
Q 042123 651 HSFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLH--------HDCFPPIVHRDISSKNLLLDLEYEA 722 (849)
Q Consensus 651 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH--------~~~~~~ivH~dlk~~Nill~~~~~~ 722 (849)
..++||||+++|+|.+++... .+++.++..++.|++.|++||| +. +|+||||||+||+++.++.+
T Consensus 75 ~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~~ 147 (303)
T 3gxj_A 75 QLWLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTC 147 (303)
T ss_dssp EEEEEEECCTTCCHHHHHHHC----CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC
T ss_pred eeEEEEeccCCCCHHHHHhcc----CcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCCE
Confidence 789999999999999999543 4788899999999999999999 76 99999999999999999999
Q ss_pred EEeeecCCcccCCCCCC----eeeccCCccccccccccCC------CCCccchHHHHHHHHHHHHhC----------CCC
Q 042123 723 HVADFGIAKSLKPDSSN----WTEFAGTCGYIAPELAYTM------KITEKCDVYSFGVLMWEVIKG----------KHP 782 (849)
Q Consensus 723 kl~DfG~a~~~~~~~~~----~~~~~g~~~y~aPE~~~~~------~~~~~~Dv~SlGvil~el~tg----------~~P 782 (849)
||+|||+++........ .....||+.|+|||++.+. .++.++|||||||++|||++| +.|
T Consensus 148 kl~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p 227 (303)
T 3gxj_A 148 CIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP 227 (303)
T ss_dssp -BCCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCT
T ss_pred EEeecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeecc
Confidence 99999999766443322 2334789999999998766 445789999999999999999 555
Q ss_pred CCcccccccccccccccccccc----CCCCCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 783 RDFLSSISSSSLNTDVALDQML----DPRLPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 783 f~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
|........ .......... .+..+... ...+....+.+++.+||+.||++|||+++|++.|+
T Consensus 228 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~ 293 (303)
T 3gxj_A 228 YYDLVPSDP---SVEEMRKVVCEQKLRPNIPNRW-QSCEALRVMAKIMRECWYANGAARLTALRIKKTLS 293 (303)
T ss_dssp TTTTCC-CC---CCC-CHHHHTTSCCCCCCCGGG-GSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHH
T ss_pred ccccCCCCc---cHHHHHHHHHHhhcCCCccccc-cchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHH
Confidence 543221110 1111111122 22222111 12245567899999999999999999999999885
No 153
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=1.1e-35 Score=320.67 Aligned_cols=240 Identities=24% Similarity=0.441 Sum_probs=178.6
Q ss_pred cCCCcCceecCCccceEEEEEec-CCcE----EEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCe
Q 042123 588 NDFDAKYCIGNGGHASVYRAELP-SGEV----VAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARH 651 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~ 651 (849)
++|+..+.||+|+||+||+|++. +++. ||+|.+.... .....+.+.+|+. .+++++... .
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~ 90 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMASVDNPHVCRLLGICLTS-T 90 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC----------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS-S
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeeccccc---CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-C
Confidence 57889999999999999999653 4444 5778765432 2223445666654 356676654 4
Q ss_pred eEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCc
Q 042123 652 SFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAK 731 (849)
Q Consensus 652 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~ 731 (849)
.++|+||+++|+|.+++.... ..+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 91 ~~~v~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 165 (327)
T 3poz_A 91 VQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 165 (327)
T ss_dssp EEEEEECCTTCBHHHHHHHST--TSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHH
T ss_pred eEEEEEecCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCccee
Confidence 789999999999999997543 3589999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCC--eeeccCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCC-C
Q 042123 732 SLKPDSSN--WTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIK-GKHPRDFLSSISSSSLNTDVALDQMLDP-R 807 (849)
Q Consensus 732 ~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~-~ 807 (849)
........ .....+|+.|+|||++.+..++.++|||||||++|||++ |+.||+...... ....+... .
T Consensus 166 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--------~~~~~~~~~~ 237 (327)
T 3poz_A 166 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--------ISSILEKGER 237 (327)
T ss_dssp HHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--------HHHHHHTTCC
T ss_pred EccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH--------HHHHHHcCCC
Confidence 76543322 233456789999999999999999999999999999999 999997433211 11111111 1
Q ss_pred CCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 808 LPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 808 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
.+.+... ...+.+++.+||+.||++|||+.+++++|+
T Consensus 238 ~~~~~~~----~~~~~~li~~~l~~~p~~Rps~~ell~~l~ 274 (327)
T 3poz_A 238 LPQPPIC----TIDVYMIMVKCWMIDADSRPKFRELIIEFS 274 (327)
T ss_dssp CCCCTTB----CHHHHHHHHHHTCSCGGGSCCHHHHHHHHH
T ss_pred CCCCccC----CHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 1222222 234788999999999999999999998874
No 154
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=3.5e-36 Score=325.78 Aligned_cols=247 Identities=23% Similarity=0.393 Sum_probs=187.4
Q ss_pred HhcCCCcCceecCCccceEEEEEec-C-----CcEEEEEEecccCCCCchhhHHHHHHHHH------------Hhhceee
Q 042123 586 ATNDFDAKYCIGNGGHASVYRAELP-S-----GEVVAVKKFHSLLPCDQTVDQKEFLTEVE------------AFYGFCS 647 (849)
Q Consensus 586 ~~~~f~~~~~lG~G~~g~Vy~~~~~-~-----~~~vavK~~~~~~~~~~~~~~~~~~~ei~------------~~~~~~~ 647 (849)
..++|+..+.||+|+||.||+|... + ...||||.+.... .......+.+|+. .+++++.
T Consensus 44 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 120 (333)
T 2i1m_A 44 PRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA---HADEKEALMSELKIMSHLGQHENIVNLLGACT 120 (333)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred CHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc---ChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence 4578999999999999999999653 2 2479999987542 1222344445543 3667788
Q ss_pred cCCeeEEEEEeccCCChhhhhccccc-----------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeee
Q 042123 648 HARHSFLLYEFLERGSLAAILNTDAA-----------AQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLL 716 (849)
Q Consensus 648 ~~~~~~lV~e~~~~gsL~~~l~~~~~-----------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill 716 (849)
+.+..++||||+++|+|.+++..... ...+++.++..++.|++.||+|||+. +|+||||||+||++
T Consensus 121 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~ 197 (333)
T 2i1m_A 121 HGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLL 197 (333)
T ss_dssp SSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEE
T ss_pred cCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEE
Confidence 88899999999999999999965431 23579999999999999999999999 99999999999999
Q ss_pred cCCCcEEEeeecCCcccCCCCCC--eeeccCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccccc
Q 042123 717 DLEYEAHVADFGIAKSLKPDSSN--WTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIK-GKHPRDFLSSISSSS 793 (849)
Q Consensus 717 ~~~~~~kl~DfG~a~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~t-g~~Pf~~~~~~~~~~ 793 (849)
+.++.+||+|||+++........ .....+++.|+|||.+.+..++.++||||||+++|||++ |..||........
T Consensus 198 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~-- 275 (333)
T 2i1m_A 198 TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK-- 275 (333)
T ss_dssp EGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHH--
T ss_pred CCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHH--
Confidence 99999999999999866433222 223456788999999998899999999999999999998 9999874321110
Q ss_pred cccccccccccCCCCCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 794 LNTDVALDQMLDPRLPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
.......... ...+... ...+.+++.+||+.||++|||+.|++++|+
T Consensus 276 --~~~~~~~~~~--~~~~~~~----~~~l~~li~~~l~~~p~~Rps~~~l~~~L~ 322 (333)
T 2i1m_A 276 --FYKLVKDGYQ--MAQPAFA----PKNIYSIMQACWALEPTHRPTFQQICSFLQ 322 (333)
T ss_dssp --HHHHHHHTCC--CCCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred --HHHHHhcCCC--CCCCCCC----CHHHHHHHHHHhccChhhCcCHHHHHHHHH
Confidence 0001111111 1111111 234788999999999999999999999874
No 155
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.9e-35 Score=316.76 Aligned_cols=251 Identities=20% Similarity=0.318 Sum_probs=182.2
Q ss_pred cCCCcCceecCCccceEEEEEec-CCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeEEE
Q 042123 588 NDFDAKYCIGNGGHASVYRAELP-SGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSFLL 655 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~lV 655 (849)
++|+..+.||+|+||+||+|+.. +|+.||||++.... ......+.+.+|+. .+++++...+..++|
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESE--DDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLV 80 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCC--C-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccc--cchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEE
Confidence 67899999999999999999664 69999999986542 22223344555544 367788888999999
Q ss_pred EEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccCC
Q 042123 656 YEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLKP 735 (849)
Q Consensus 656 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~~ 735 (849)
|||+++++|.+++... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+.....
T Consensus 81 ~e~~~~~~l~~~~~~~---~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 154 (311)
T 4agu_A 81 FEYCDHTVLHELDRYQ---RGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTG 154 (311)
T ss_dssp EECCSEEHHHHHHHTS---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC-
T ss_pred EEeCCCchHHHHHhhh---cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccC
Confidence 9999999999987643 3489999999999999999999999 999999999999999999999999999987765
Q ss_pred CCCCeeeccCCccccccccccC-CCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccc------------ccccc
Q 042123 736 DSSNWTEFAGTCGYIAPELAYT-MKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTD------------VALDQ 802 (849)
Q Consensus 736 ~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~------------~~~~~ 802 (849)
.........+|+.|+|||.+.+ ..++.++||||+|+++|+|++|+.||.............. .....
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (311)
T 4agu_A 155 PSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQ 234 (311)
T ss_dssp -----------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCG
T ss_pred cccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccccccccc
Confidence 4444556688999999999876 5679999999999999999999999975432111000000 00000
Q ss_pred c-cCCCCCCCCh------hhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 803 M-LDPRLPAPSR------SAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 803 ~-~~~~~~~~~~------~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
. .....+.+.. ........+.+++.+||+.||++|||++|+++|
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 235 YFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp GGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred ccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 0 0011111100 001122347889999999999999999999976
No 156
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=1.2e-35 Score=325.64 Aligned_cols=241 Identities=16% Similarity=0.180 Sum_probs=181.1
Q ss_pred hcCCCcCceecCCccceEEEEE------ecCCcEEEEEEecccCCCCchhhHHHHHHH--------HHHhhceeecCCee
Q 042123 587 TNDFDAKYCIGNGGHASVYRAE------LPSGEVVAVKKFHSLLPCDQTVDQKEFLTE--------VEAFYGFCSHARHS 652 (849)
Q Consensus 587 ~~~f~~~~~lG~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~~~~~e--------i~~~~~~~~~~~~~ 652 (849)
.++|...+.||+|+||+||+|. ..+++.||||++...... .........+. +..+++++...+..
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~ 142 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPW-EFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGS 142 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCCHH-HHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCE
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCChh-HHHHHHHHHHHhhhhhhhhhhhhheeeecCCCc
Confidence 3678899999999999999993 456899999998653211 11111111111 22356777788899
Q ss_pred EEEEEeccCCChhhhhcccc--cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecC-----------C
Q 042123 653 FLLYEFLERGSLAAILNTDA--AAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDL-----------E 719 (849)
Q Consensus 653 ~lV~e~~~~gsL~~~l~~~~--~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~-----------~ 719 (849)
++||||+++|+|.+++.... ....+++.++..++.||+.||+|||+. +|+||||||+|||++. +
T Consensus 143 ~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~~~~~~~ 219 (365)
T 3e7e_A 143 VLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDDEDDLS 219 (365)
T ss_dssp EEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC------C
T ss_pred EEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCcccccccc
Confidence 99999999999999997532 234699999999999999999999998 9999999999999998 8
Q ss_pred CcEEEeeecCCcccCC--CCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccc
Q 042123 720 YEAHVADFGIAKSLKP--DSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTD 797 (849)
Q Consensus 720 ~~~kl~DfG~a~~~~~--~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~ 797 (849)
+.+||+|||+|+.+.. .........||+.|+|||++.+..++.++|||||||++|||++|+.||...... .
T Consensus 220 ~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~-------~ 292 (365)
T 3e7e_A 220 AGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGG-------E 292 (365)
T ss_dssp TTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETT-------E
T ss_pred CCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCC-------c
Confidence 9999999999975432 222345567999999999999999999999999999999999999998632211 0
Q ss_pred cccccccCCCCCCCChhhHHHHHHHHHHHhhccCCCCCCC-CCHHHHHhhh
Q 042123 798 VALDQMLDPRLPAPSRSAQEKLISIMEVAFSCFNESPESR-PTMKIISQQL 847 (849)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R-Pt~~eil~~L 847 (849)
.. +........ . ...+.+++..|++.+|.+| |+++++.+.|
T Consensus 293 ~~----~~~~~~~~~--~---~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l 334 (365)
T 3e7e_A 293 CK----PEGLFRRLP--H---LDMWNEFFHVMLNIPDCHHLPSLDLLRQKL 334 (365)
T ss_dssp EE----ECSCCTTCS--S---HHHHHHHHHHHHCCCCTTCCCCHHHHHHHH
T ss_pred ee----echhccccC--c---HHHHHHHHHHHcCCCCCCcchHHHHHHHHH
Confidence 01 111111111 1 2236678889999999998 6777776655
No 157
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=1e-35 Score=319.21 Aligned_cols=246 Identities=22% Similarity=0.410 Sum_probs=189.1
Q ss_pred hcCCCcCceecCCccceEEEEEe------cCCcEEEEEEecccCCCCchhhHHHHHHHHH------------Hhhceeec
Q 042123 587 TNDFDAKYCIGNGGHASVYRAEL------PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE------------AFYGFCSH 648 (849)
Q Consensus 587 ~~~f~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~------------~~~~~~~~ 648 (849)
.++|+..+.||+|+||.||+|+. .+++.||||.+.... .....+.+.+|+. ++++++..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 98 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA---HLTEREALMSELKVLSYLGNHMNIVNLLGACTI 98 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcch---hHHHHHHHHHHHHHHhhcccCCCeeeEEEEEec
Confidence 36788999999999999999964 357889999987542 1222344555543 35677788
Q ss_pred CCeeEEEEEeccCCChhhhhccccc---------------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCC
Q 042123 649 ARHSFLLYEFLERGSLAAILNTDAA---------------AQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKN 713 (849)
Q Consensus 649 ~~~~~lV~e~~~~gsL~~~l~~~~~---------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~N 713 (849)
.+..++||||+++|+|.+++..... ...+++.++..++.|++.||+|||+. +|+||||||+|
T Consensus 99 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~N 175 (313)
T 1t46_A 99 GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARN 175 (313)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGG
T ss_pred CCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccce
Confidence 8899999999999999999975432 12489999999999999999999999 99999999999
Q ss_pred eeecCCCcEEEeeecCCcccCCCCCC--eeeccCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCcccccc
Q 042123 714 LLLDLEYEAHVADFGIAKSLKPDSSN--WTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIK-GKHPRDFLSSIS 790 (849)
Q Consensus 714 ill~~~~~~kl~DfG~a~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~t-g~~Pf~~~~~~~ 790 (849)
|+++.++.+||+|||+++........ .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||.......
T Consensus 176 il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~ 255 (313)
T 1t46_A 176 ILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS 255 (313)
T ss_dssp EEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH
T ss_pred EEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh
Confidence 99999999999999999877654332 223456788999999999899999999999999999999 999987433211
Q ss_pred ccccccccccccccCCCCCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 791 SSSLNTDVALDQMLDPRLPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
. ............ .+... ...+.+++.+||+.||++|||++|++++|+
T Consensus 256 ~----~~~~~~~~~~~~--~~~~~----~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 303 (313)
T 1t46_A 256 K----FYKMIKEGFRML--SPEHA----PAEMYDIMKTCWDADPLKRPTFKQIVQLIE 303 (313)
T ss_dssp H----HHHHHHHTCCCC--CCTTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred H----HHHHhccCCCCC--CcccC----CHHHHHHHHHHcCCCchhCcCHHHHHHHHH
Confidence 0 000111111111 11111 234788999999999999999999999875
No 158
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=3.4e-35 Score=321.64 Aligned_cols=257 Identities=19% Similarity=0.224 Sum_probs=186.3
Q ss_pred HHHHHhcCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCc-hhhHHHHHHH----------HHHhhceeecC
Q 042123 582 EIVKATNDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQ-TVDQKEFLTE----------VEAFYGFCSHA 649 (849)
Q Consensus 582 ~~~~~~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~-~~~~~~~~~e----------i~~~~~~~~~~ 649 (849)
+.....++|++.+.||+|+||+||+|+. .+++.||||++........ ...+...++. +..+++++...
T Consensus 29 ~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~ 108 (360)
T 3llt_A 29 KGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYY 108 (360)
T ss_dssp TTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEET
T ss_pred cceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeEC
Confidence 3334457899999999999999999965 5789999999864211000 0111122222 22467778888
Q ss_pred CeeEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecC-----------
Q 042123 650 RHSFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDL----------- 718 (849)
Q Consensus 650 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~----------- 718 (849)
+..++||||+ +++|.+++.... ...+++.++..++.||+.||+|||+. +|+||||||+||+++.
T Consensus 109 ~~~~lv~e~~-~~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~~~~~ 183 (360)
T 3llt_A 109 DHMCLIFEPL-GPSLYEIITRNN-YNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYFEKSLITVR 183 (360)
T ss_dssp TEEEEEECCC-CCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTCCEEEEEEE
T ss_pred CeeEEEEcCC-CCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccccccccccchh
Confidence 8999999999 899999997543 23589999999999999999999999 9999999999999975
Q ss_pred --------------CCcEEEeeecCCcccCCCCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCC
Q 042123 719 --------------EYEAHVADFGIAKSLKPDSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRD 784 (849)
Q Consensus 719 --------------~~~~kl~DfG~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~ 784 (849)
++.+||+|||+++..... .....||+.|+|||++.+..++.++||||+||++|||++|+.||.
T Consensus 184 ~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~ 260 (360)
T 3llt_A 184 RVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY---HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFR 260 (360)
T ss_dssp CTTTCCEEEEEEESCCCEEECCCTTCEETTSC---CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCC
T ss_pred cccccccccccccCCCCEEEEeccCceecCCC---CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCC
Confidence 789999999999865432 234678999999999999999999999999999999999999997
Q ss_pred cccccccc-------ccccccc--------cccc-----cCCCCCCCChhhH--------------HHHHHHHHHHhhcc
Q 042123 785 FLSSISSS-------SLNTDVA--------LDQM-----LDPRLPAPSRSAQ--------------EKLISIMEVAFSCF 830 (849)
Q Consensus 785 ~~~~~~~~-------~~~~~~~--------~~~~-----~~~~~~~~~~~~~--------------~~~~~l~~li~~cl 830 (849)
........ ....... .... .....+....... .....+.+++.+||
T Consensus 261 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L 340 (360)
T 3llt_A 261 THEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSIL 340 (360)
T ss_dssp CSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHC
T ss_pred CCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHh
Confidence 43311100 0000000 0000 0000111100000 01145779999999
Q ss_pred CCCCCCCCCHHHHHhh
Q 042123 831 NESPESRPTMKIISQQ 846 (849)
Q Consensus 831 ~~dP~~RPt~~eil~~ 846 (849)
+.||++|||++|+++|
T Consensus 341 ~~dP~~Rpta~elL~h 356 (360)
T 3llt_A 341 QIDPTLRPSPAELLKH 356 (360)
T ss_dssp CSSGGGSCCHHHHTTS
T ss_pred cCChhhCCCHHHHhcC
Confidence 9999999999999986
No 159
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.4e-36 Score=332.41 Aligned_cols=250 Identities=21% Similarity=0.298 Sum_probs=188.0
Q ss_pred HHHHHHHhcCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCC-----CchhhHHHHHHH-----HHHhhceeec
Q 042123 580 YDEIVKATNDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPC-----DQTVDQKEFLTE-----VEAFYGFCSH 648 (849)
Q Consensus 580 ~~~~~~~~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-----~~~~~~~~~~~e-----i~~~~~~~~~ 648 (849)
+.+.....++|+..+.||+|+||+||+|+. .+|+.||||++.+.... .....+...+.. +..+++++.+
T Consensus 53 ~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 132 (412)
T 2vd5_A 53 LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQD 132 (412)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEee
Confidence 344445568999999999999999999966 47999999998642100 001111222221 2346778888
Q ss_pred CCeeEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeec
Q 042123 649 ARHSFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFG 728 (849)
Q Consensus 649 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG 728 (849)
.+..|+||||+++|+|.+++.+.. ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 133 ~~~~~lVmE~~~gg~L~~~l~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~DFG 207 (412)
T 2vd5_A 133 ENYLYLVMEYYVGGDLLTLLSKFG--ERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLADFG 207 (412)
T ss_dssp SSEEEEEECCCCSCBHHHHHHHHS--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred CCEEEEEEcCCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEeech
Confidence 899999999999999999996532 3589999999999999999999998 99999999999999999999999999
Q ss_pred CCcccCCCCCC-eeeccCCcccccccccc-------CCCCCccchHHHHHHHHHHHHhCCCCCCcccccccccccccccc
Q 042123 729 IAKSLKPDSSN-WTEFAGTCGYIAPELAY-------TMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVAL 800 (849)
Q Consensus 729 ~a~~~~~~~~~-~~~~~g~~~y~aPE~~~-------~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~ 800 (849)
+++........ ....+||+.|+|||++. ...++.++|||||||++|||++|+.||...... ...
T Consensus 208 la~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~--------~~~ 279 (412)
T 2vd5_A 208 SCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTA--------ETY 279 (412)
T ss_dssp TCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHH
T ss_pred hheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHH--------HHH
Confidence 99877544322 23457999999999987 356899999999999999999999999743321 111
Q ss_pred ccccC----CCCCCCChhhHHHHHHHHHHHhhccCCCCCCC---CCHHHHHhh
Q 042123 801 DQMLD----PRLPAPSRSAQEKLISIMEVAFSCFNESPESR---PTMKIISQQ 846 (849)
Q Consensus 801 ~~~~~----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R---Pt~~eil~~ 846 (849)
..+.. ...+.. .......+.+++.+||. +|++| |+++||++|
T Consensus 280 ~~i~~~~~~~~~p~~---~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 280 GKIVHYKEHLSLPLV---DEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp HHHHTHHHHCCCC-------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred HHHHhcccCcCCCcc---ccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 11111 111110 01122347889999999 99998 699999876
No 160
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=2e-35 Score=326.90 Aligned_cols=253 Identities=16% Similarity=0.242 Sum_probs=186.1
Q ss_pred cCCCcCceecCC--ccceEEEEEec-CCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeE
Q 042123 588 NDFDAKYCIGNG--GHASVYRAELP-SGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSF 653 (849)
Q Consensus 588 ~~f~~~~~lG~G--~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~ 653 (849)
++|++.+.||+| +||.||+|+.. +++.||||++..... .......+.+|+. ++++++...+..+
T Consensus 25 ~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 102 (389)
T 3gni_B 25 GCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEAC--SNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELW 102 (389)
T ss_dssp GGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGS--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred CcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEeccccc--ChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEE
Confidence 678999999999 99999999664 799999999875422 1223344555544 3678888899999
Q ss_pred EEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCccc
Q 042123 654 LLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSL 733 (849)
Q Consensus 654 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~ 733 (849)
+||||+++|+|.+++.... ...+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||.+...
T Consensus 103 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~ 178 (389)
T 3gni_B 103 VVTSFMAYGSAKDLICTHF-MDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSM 178 (389)
T ss_dssp EEEECCTTCBHHHHHHHTC-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEEEccCCCCHHHHHhhhc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccceee
Confidence 9999999999999986543 23589999999999999999999999 9999999999999999999999999988654
Q ss_pred CCCC-------CCeeeccCCccccccccccC--CCCCccchHHHHHHHHHHHHhCCCCCCcccccccccccccccccccc
Q 042123 734 KPDS-------SNWTEFAGTCGYIAPELAYT--MKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQML 804 (849)
Q Consensus 734 ~~~~-------~~~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~ 804 (849)
.... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.....................
T Consensus 179 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 258 (389)
T 3gni_B 179 ISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLL 258 (389)
T ss_dssp EETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC---------
T ss_pred ccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccc
Confidence 2211 11122468899999999987 67899999999999999999999999753322110000000000000
Q ss_pred CCC---------------------------C-------CCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 805 DPR---------------------------L-------PAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 805 ~~~---------------------------~-------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
+.. . .............+.+++.+||+.||++|||++|+++|
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 259 DTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp -----------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred cccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 000 0 00000111223458899999999999999999999876
No 161
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=2.1e-35 Score=328.99 Aligned_cols=247 Identities=21% Similarity=0.259 Sum_probs=178.3
Q ss_pred HHhcCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCC----chhhHHHHHHHHH-----------Hhhceeec
Q 042123 585 KATNDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCD----QTVDQKEFLTEVE-----------AFYGFCSH 648 (849)
Q Consensus 585 ~~~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~----~~~~~~~~~~ei~-----------~~~~~~~~ 648 (849)
...++|...+.||+|+||.||+|.. .+++.||||++....... .......+.+|+. ++++++.
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~- 210 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD- 210 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-
Confidence 3457999999999999999999954 578999999986532110 0111112334433 3666664
Q ss_pred CCeeEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCC---cEEEe
Q 042123 649 ARHSFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEY---EAHVA 725 (849)
Q Consensus 649 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~---~~kl~ 725 (849)
.+..++||||+++|+|.+++... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++ .+||+
T Consensus 211 ~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~ 284 (419)
T 3i6u_A 211 AEDYYIVLELMEGGELFDKVVGN---KRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKIT 284 (419)
T ss_dssp SSEEEEEEECCTTCBGGGGTSSS---CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEEC
T ss_pred cCceEEEEEcCCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEe
Confidence 45679999999999999998654 3589999999999999999999999 999999999999997544 59999
Q ss_pred eecCCcccCCCCCCeeeccCCccccccccccC---CCCCccchHHHHHHHHHHHHhCCCCCCcccccccccccccccccc
Q 042123 726 DFGIAKSLKPDSSNWTEFAGTCGYIAPELAYT---MKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQ 802 (849)
Q Consensus 726 DfG~a~~~~~~~~~~~~~~g~~~y~aPE~~~~---~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~ 802 (849)
|||+++..... .......||+.|+|||++.+ ..++.++||||+||++|+|++|+.||...... ......
T Consensus 285 DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~-------~~~~~~ 356 (419)
T 3i6u_A 285 DFGHSKILGET-SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ-------VSLKDQ 356 (419)
T ss_dssp CSSTTTSCC------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSS-------CCHHHH
T ss_pred ecccceecCCC-ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcch-------HHHHHH
Confidence 99999876543 23345679999999999853 66888999999999999999999999743211 111112
Q ss_pred ccCCCCCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 803 MLDPRLPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
+........+.........+.+++.+||+.||++|||++|+++|
T Consensus 357 i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 357 ITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp HHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HhcCCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 22222222222222234568899999999999999999999986
No 162
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=1.4e-35 Score=333.90 Aligned_cols=241 Identities=25% Similarity=0.439 Sum_probs=184.1
Q ss_pred HhcCCCcCceecCCccceEEEEEecCCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeEE
Q 042123 586 ATNDFDAKYCIGNGGHASVYRAELPSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSFL 654 (849)
Q Consensus 586 ~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~l 654 (849)
..++|+..+.||+|+||.||+|.+.++..||||+++.... ..+.+.+|+. ++++++.+ +..++
T Consensus 182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-----~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~i 255 (452)
T 1fmk_A 182 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-----SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYI 255 (452)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSS-----CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEE
T ss_pred ChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCC-----CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEE
Confidence 3467888999999999999999988788899999875321 2345566654 35667655 67899
Q ss_pred EEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccC
Q 042123 655 LYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLK 734 (849)
Q Consensus 655 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~ 734 (849)
||||+++|+|.+++.... ...+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 256 v~e~~~~gsL~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 331 (452)
T 1fmk_A 256 VTEYMSKGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIE 331 (452)
T ss_dssp EECCCTTCBHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC---
T ss_pred EehhhcCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecC
Confidence 999999999999997533 24589999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCC-CeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCC-CCCCC
Q 042123 735 PDSS-NWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIK-GKHPRDFLSSISSSSLNTDVALDQMLDP-RLPAP 811 (849)
Q Consensus 735 ~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 811 (849)
.... ......++..|+|||.+.+..++.++||||||+++|||++ |+.||...... .....+... +.+.+
T Consensus 332 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~--------~~~~~i~~~~~~~~~ 403 (452)
T 1fmk_A 332 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--------EVLDQVERGYRMPCP 403 (452)
T ss_dssp -----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--------HHHHHHHTTCCCCCC
T ss_pred CCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHcCCCCCCC
Confidence 3321 1233456788999999998899999999999999999999 99998743221 111111111 22222
Q ss_pred ChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 812 SRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 812 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
... ...+.+++.+||+.||++|||+++|++.|+
T Consensus 404 ~~~----~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~ 436 (452)
T 1fmk_A 404 PEC----PESLHDLMCQCWRKEPEERPTFEYLQAFLE 436 (452)
T ss_dssp TTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCC----CHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 222 234788999999999999999999998875
No 163
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=1.8e-35 Score=336.21 Aligned_cols=245 Identities=19% Similarity=0.266 Sum_probs=188.9
Q ss_pred cCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeEEE
Q 042123 588 NDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSFLL 655 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~lV 655 (849)
++|+..+.||+|+||.||+|+. .+|+.||||++...... .......+.+|+. .+++++...+..++|
T Consensus 184 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~-~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIK-KRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred cceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhh-hhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 5788899999999999999966 47999999998642110 1111233444433 366778888899999
Q ss_pred EEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccCC
Q 042123 656 YEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLKP 735 (849)
Q Consensus 656 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~~ 735 (849)
|||+++|+|.+++.... ...+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 263 mEy~~gg~L~~~l~~~~-~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~ 338 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMG-QAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPE 338 (576)
T ss_dssp ECCCCSCBHHHHHHSSS-SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEcCCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceeccc
Confidence 99999999999986543 23489999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCChhh
Q 042123 736 DSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPAPSRSA 815 (849)
Q Consensus 736 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 815 (849)
. .......||+.|+|||++.+..++.++||||+||++|||++|+.||....... ........+.......+..
T Consensus 339 ~-~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~----~~~~i~~~i~~~~~~~p~~-- 411 (576)
T 2acx_A 339 G-QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI----KREEVERLVKEVPEEYSER-- 411 (576)
T ss_dssp T-CCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCC----CHHHHHHHHHHCCCCCCTT--
T ss_pred C-ccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccch----hHHHHHHHhhcccccCCcc--
Confidence 3 23455689999999999999899999999999999999999999997432111 1111111111111111111
Q ss_pred HHHHHHHHHHHhhccCCCCCCCC-----CHHHHHhh
Q 042123 816 QEKLISIMEVAFSCFNESPESRP-----TMKIISQQ 846 (849)
Q Consensus 816 ~~~~~~l~~li~~cl~~dP~~RP-----t~~eil~~ 846 (849)
....+.+++.+||+.||++|| +++||++|
T Consensus 412 --~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 412 --FSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp --SCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred --CCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 123478899999999999999 78999876
No 164
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.6e-35 Score=316.31 Aligned_cols=240 Identities=26% Similarity=0.460 Sum_probs=177.5
Q ss_pred cCCCcCceecCCccceEEEEEecCCcEEEEEEecccCCCCchhhHHHHHHHHHH-----------hhceeecCCeeEEEE
Q 042123 588 NDFDAKYCIGNGGHASVYRAELPSGEVVAVKKFHSLLPCDQTVDQKEFLTEVEA-----------FYGFCSHARHSFLLY 656 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~~-----------~~~~~~~~~~~~lV~ 656 (849)
++|+..+.||+|+||.||+|++. ++.||||++... ...+.+.+|+.. +++++. +..++||
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~------~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~ 78 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE------SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVM 78 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST------THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEE
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh------hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEE
Confidence 57888999999999999999885 789999998642 223455666543 444444 3478999
Q ss_pred EeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCc-EEEeeecCCcccCC
Q 042123 657 EFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYE-AHVADFGIAKSLKP 735 (849)
Q Consensus 657 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~-~kl~DfG~a~~~~~ 735 (849)
||+++|+|.+++........+++.+++.++.|+++||+|||+....+|+||||||+||+++.++. +||+|||++.....
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~ 158 (307)
T 2eva_A 79 EYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT 158 (307)
T ss_dssp ECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------
T ss_pred EcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccc
Confidence 99999999999976654456899999999999999999999932128999999999999998886 79999999976543
Q ss_pred CCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCChhh
Q 042123 736 DSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPAPSRSA 815 (849)
Q Consensus 736 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 815 (849)
. .....||+.|+|||.+.+..++.++||||||+++|||++|+.||....... ............+....
T Consensus 159 ~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~~~-- 227 (307)
T 2eva_A 159 H---MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPA------FRIMWAVHNGTRPPLIK-- 227 (307)
T ss_dssp ---------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSH------HHHHHHHHTTCCCCCBT--
T ss_pred c---cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccH------HHHHHHHhcCCCCCccc--
Confidence 2 234568999999999999999999999999999999999999997432211 00111111111111111
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 816 QEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 816 ~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
.....+.+++.+||+.||++|||+++++++|+
T Consensus 228 -~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 259 (307)
T 2eva_A 228 -NLPKPIESLMTRCWSKDPSQRPSMEEIVKIMT 259 (307)
T ss_dssp -TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -ccCHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 11234778999999999999999999999874
No 165
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=1.4e-35 Score=337.35 Aligned_cols=241 Identities=25% Similarity=0.418 Sum_probs=189.5
Q ss_pred hcCCCcCceecCCccceEEEEEec-CCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeEE
Q 042123 587 TNDFDAKYCIGNGGHASVYRAELP-SGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSFL 654 (849)
Q Consensus 587 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~l 654 (849)
.++|+..+.||+|+||.||+|.+. ++..||||.+..... ..+.+.+|+. ++++++......++
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 293 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-----EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 293 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS-----CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc-----chHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEE
Confidence 467888999999999999999765 488999999875321 2345666644 36788888889999
Q ss_pred EEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccC
Q 042123 655 LYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLK 734 (849)
Q Consensus 655 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~ 734 (849)
||||+++|+|.+++.... ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 294 v~E~~~~g~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 369 (495)
T 1opk_A 294 ITEFMTYGNLLDYLRECN-RQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMT 369 (495)
T ss_dssp EEECCTTCBHHHHHHHSC-TTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCT
T ss_pred EEEccCCCCHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceecc
Confidence 999999999999996533 24589999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCC-CeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCC-CCCCC
Q 042123 735 PDSS-NWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIK-GKHPRDFLSSISSSSLNTDVALDQMLDP-RLPAP 811 (849)
Q Consensus 735 ~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 811 (849)
.... ......++..|+|||.+.+..++.++|||||||++|||++ |+.||...... .....+... +...+
T Consensus 370 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~--------~~~~~~~~~~~~~~~ 441 (495)
T 1opk_A 370 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--------QVYELLEKDYRMERP 441 (495)
T ss_dssp TCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--------GHHHHHHTTCCCCCC
T ss_pred CCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHcCCCCCCC
Confidence 3321 1122345678999999998899999999999999999999 99998743321 111111111 11112
Q ss_pred ChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 812 SRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 812 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
... ...+.+++.+||+.||++|||+++|++.|+
T Consensus 442 ~~~----~~~l~~li~~cl~~dP~~RPs~~el~~~L~ 474 (495)
T 1opk_A 442 EGC----PEKVYELMRACWQWNPSDRPSFAEIHQAFE 474 (495)
T ss_dssp TTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCC----CHHHHHHHHHHcCcChhHCcCHHHHHHHHH
Confidence 222 234788999999999999999999999875
No 166
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=3.3e-35 Score=318.03 Aligned_cols=244 Identities=23% Similarity=0.430 Sum_probs=186.5
Q ss_pred hcCCCcCceecCCccceEEEEEe--------cCCcEEEEEEecccCCCCchhhHHHHHHHHH------------Hhhcee
Q 042123 587 TNDFDAKYCIGNGGHASVYRAEL--------PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE------------AFYGFC 646 (849)
Q Consensus 587 ~~~f~~~~~lG~G~~g~Vy~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~------------~~~~~~ 646 (849)
.++|+..+.||+|+||.||+|+. .++..||||++.... .......+.+|+. .+++++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~ 110 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA---TEKDLSDLVSEMEMMKMIGKHKNIINLLGAC 110 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCC---cHHHHHHHHHHHHHHHHhhcCCCEeeEEEEE
Confidence 36888999999999999999975 357789999987542 2222334444433 367788
Q ss_pred ecCCeeEEEEEeccCCChhhhhccccc-------------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCC
Q 042123 647 SHARHSFLLYEFLERGSLAAILNTDAA-------------AQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKN 713 (849)
Q Consensus 647 ~~~~~~~lV~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~N 713 (849)
...+..++||||+++|+|.+++..... ...+++.++..++.||+.||+|||+. +|+||||||+|
T Consensus 111 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~N 187 (334)
T 2pvf_A 111 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARN 187 (334)
T ss_dssp CSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGG
T ss_pred ccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccce
Confidence 888899999999999999999975432 23489999999999999999999999 99999999999
Q ss_pred eeecCCCcEEEeeecCCcccCCCCCC--eeeccCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCcccccc
Q 042123 714 LLLDLEYEAHVADFGIAKSLKPDSSN--WTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIK-GKHPRDFLSSIS 790 (849)
Q Consensus 714 ill~~~~~~kl~DfG~a~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~t-g~~Pf~~~~~~~ 790 (849)
|+++.++.+||+|||+++........ .....+++.|+|||++.+..++.++||||||+++|||++ |+.||......
T Consensus 188 Ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~- 266 (334)
T 2pvf_A 188 VLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE- 266 (334)
T ss_dssp EEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-
T ss_pred EEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHH-
Confidence 99999999999999999876543221 223356788999999988889999999999999999999 99998743211
Q ss_pred ccccccccccccccCCC-CCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 791 SSSLNTDVALDQMLDPR-LPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 791 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
.....+.... ...+... ...+.+++.+||+.||++|||++|++++|+
T Consensus 267 -------~~~~~~~~~~~~~~~~~~----~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 314 (334)
T 2pvf_A 267 -------ELFKLLKEGHRMDKPANC----TNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314 (334)
T ss_dssp -------HHHHHHHHTCCCCCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -------HHHHHHhcCCCCCCCccC----CHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 1111111111 1111111 234788999999999999999999999874
No 167
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=2.7e-35 Score=315.00 Aligned_cols=255 Identities=25% Similarity=0.321 Sum_probs=183.1
Q ss_pred HhcCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCC-------chhhHHHHHHH--------HHHhhceeecC
Q 042123 586 ATNDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCD-------QTVDQKEFLTE--------VEAFYGFCSHA 649 (849)
Q Consensus 586 ~~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-------~~~~~~~~~~e--------i~~~~~~~~~~ 649 (849)
..++|+..+.||+|+||+||+|+. .+++.||||++....... ....+...++. +.++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 457999999999999999999975 578999999986432110 11111122222 22356666554
Q ss_pred C-----eeEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEE
Q 042123 650 R-----HSFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHV 724 (849)
Q Consensus 650 ~-----~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl 724 (849)
. ..++||||++ |+|.+++..... ..+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~-~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl 161 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPP-PGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKL 161 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCT-TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEEE
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEE
Confidence 3 5799999997 599999876542 3489999999999999999999999 9999999999999999999999
Q ss_pred eeecCCcccCCCCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccc-----------
Q 042123 725 ADFGIAKSLKPDSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSS----------- 793 (849)
Q Consensus 725 ~DfG~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~----------- 793 (849)
+|||+++...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||..........
T Consensus 162 ~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~ 240 (308)
T 3g33_A 162 ADFGLARIYSYQM-ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE 240 (308)
T ss_dssp CSCSCTTTSTTCC-CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCT
T ss_pred eeCccccccCCCc-ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCh
Confidence 9999998765432 3355678999999999999999999999999999999999999997433211000
Q ss_pred --ccccccc-ccccCCCCCCC-ChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 794 --LNTDVAL-DQMLDPRLPAP-SRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 794 --~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
....... .....+..+.+ .....+....+.+++.+||+.||++|||++|+++|
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 241 DDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp TTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 0000000 00000000000 00001122457889999999999999999999986
No 168
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=2.3e-35 Score=311.06 Aligned_cols=241 Identities=22% Similarity=0.397 Sum_probs=175.4
Q ss_pred hcCCCcCceecCCccceEEEEEec----CCcEEEEEEecccCCCCchhhHHHHHHHHHH-----------hhceeecCCe
Q 042123 587 TNDFDAKYCIGNGGHASVYRAELP----SGEVVAVKKFHSLLPCDQTVDQKEFLTEVEA-----------FYGFCSHARH 651 (849)
Q Consensus 587 ~~~f~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~ei~~-----------~~~~~~~~~~ 651 (849)
.++|+..+.||+|+||.||+|... .+..||+|.+.... .....+.+.+|+.. +++++ ..+.
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-~~~~ 89 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT---SDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENP 89 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTT---SHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-CSSS
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccC---CHHHHHHHHHHHHHHHhCCCCccceEEEEE-ccCc
Confidence 367888999999999999999653 24579999876532 22334556666553 55665 3467
Q ss_pred eEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCc
Q 042123 652 SFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAK 731 (849)
Q Consensus 652 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~ 731 (849)
.++||||+++|+|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 164 (281)
T 1mp8_A 90 VWIIMELCTLGELRSFLQVRK--YSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 164 (281)
T ss_dssp CEEEEECCTTEEHHHHHHHTT--TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC-----
T ss_pred cEEEEecCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECcccccc
Confidence 889999999999999996432 3589999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCC-CeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCC-C
Q 042123 732 SLKPDSS-NWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIK-GKHPRDFLSSISSSSLNTDVALDQMLDPR-L 808 (849)
Q Consensus 732 ~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~-~ 808 (849)
....... ......+++.|+|||.+.+..++.++||||||+++|||++ |..||...... .....+.... .
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~--------~~~~~i~~~~~~ 236 (281)
T 1mp8_A 165 YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--------DVIGRIENGERL 236 (281)
T ss_dssp --------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--------GHHHHHHTTCCC
T ss_pred ccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHH--------HHHHHHHcCCCC
Confidence 7654322 1233456788999999998899999999999999999996 99999743321 1111121211 1
Q ss_pred CCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 809 PAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 809 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
+.+... ...+.+++.+||+.||++|||+.|++++|+
T Consensus 237 ~~~~~~----~~~l~~li~~~l~~~p~~Rps~~~l~~~l~ 272 (281)
T 1mp8_A 237 PMPPNC----PPTLYSLMTKCWAYDPSRRPRFTELKAQLS 272 (281)
T ss_dssp CCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCCC----CHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 111112 234778999999999999999999999875
No 169
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=1.8e-35 Score=317.77 Aligned_cols=249 Identities=19% Similarity=0.330 Sum_probs=181.3
Q ss_pred cCCCcC-ceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHHHH------------HhhceeecCCeeE
Q 042123 588 NDFDAK-YCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE------------AFYGFCSHARHSF 653 (849)
Q Consensus 588 ~~f~~~-~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~------------~~~~~~~~~~~~~ 653 (849)
+.|++. +.||+|+||.||+|.. .+++.||||++..... .....+.+|+. .+++++...+..+
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~ 87 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPG----HIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFY 87 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSS----CCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcc----hhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEE
Confidence 567774 7899999999999965 4799999999865422 12333444433 3667788889999
Q ss_pred EEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCc---EEEeeecCC
Q 042123 654 LLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYE---AHVADFGIA 730 (849)
Q Consensus 654 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~---~kl~DfG~a 730 (849)
+||||+++|+|.+++... ..+++.++..++.||+.||+|||+. +|+||||||+||+++.++. +||+|||++
T Consensus 88 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~ 161 (316)
T 2ac3_A 88 LVFEKMRGGSILSHIHKR---RHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLG 161 (316)
T ss_dssp EEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCC
T ss_pred EEEEcCCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCc
Confidence 999999999999999653 3589999999999999999999999 9999999999999998876 999999999
Q ss_pred cccCCCC-------CCeeeccCCccccccccccC-----CCCCccchHHHHHHHHHHHHhCCCCCCccccccccccc---
Q 042123 731 KSLKPDS-------SNWTEFAGTCGYIAPELAYT-----MKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLN--- 795 (849)
Q Consensus 731 ~~~~~~~-------~~~~~~~g~~~y~aPE~~~~-----~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~--- 795 (849)
....... .......||+.|+|||.+.+ ..++.++||||+||++|||++|+.||............
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~ 241 (316)
T 2ac3_A 162 SGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEA 241 (316)
T ss_dssp C-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----C
T ss_pred cccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccccccccccccccc
Confidence 8654221 11233568999999999875 45789999999999999999999999754321100000
Q ss_pred ----cccccccccCCCCCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 796 ----TDVALDQMLDPRLPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 796 ----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
.......+.......+..........+.+++.+||+.||++|||++|++++
T Consensus 242 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 242 CPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp CHHHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred chhHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 001112222222222211111223458899999999999999999999986
No 170
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=1.5e-35 Score=321.67 Aligned_cols=238 Identities=26% Similarity=0.396 Sum_probs=184.2
Q ss_pred cCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeEEE
Q 042123 588 NDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSFLL 655 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~lV 655 (849)
+.|+..+.||+|+||.||+|+. .+++.||||++..... ......+.+.+|+. .+++++......++|
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 132 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGK-QSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 132 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSS-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccc-cchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence 4588889999999999999964 5799999999865422 22223345666654 367788888999999
Q ss_pred EEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccCC
Q 042123 656 YEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLKP 735 (849)
Q Consensus 656 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~~ 735 (849)
|||++ |++.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 133 ~e~~~-g~l~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~ 206 (348)
T 1u5q_A 133 MEYCL-GSASDLLEVHK--KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 206 (348)
T ss_dssp EECCS-EEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS
T ss_pred EecCC-CCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCC
Confidence 99998 58888875432 4589999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCCeeeccCCcccccccccc---CCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCC-CC
Q 042123 736 DSSNWTEFAGTCGYIAPELAY---TMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLP-AP 811 (849)
Q Consensus 736 ~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 811 (849)
. ....||+.|+|||++. ...++.++|||||||++|||++|+.||....... ....+.....+ ..
T Consensus 207 ~----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~--------~~~~~~~~~~~~~~ 274 (348)
T 1u5q_A 207 A----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS--------ALYHIAQNESPALQ 274 (348)
T ss_dssp B----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--------HHHHHHHSCCCCCC
T ss_pred C----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH--------HHHHHHhcCCCCCC
Confidence 2 3457999999999884 5678999999999999999999999987433211 01111111111 01
Q ss_pred ChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhh
Q 042123 812 SRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQL 847 (849)
Q Consensus 812 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L 847 (849)
... ....+.+++.+||+.||++|||+++++++-
T Consensus 275 ~~~---~~~~l~~li~~~l~~dP~~Rps~~~ll~h~ 307 (348)
T 1u5q_A 275 SGH---WSEYFRNFVDSCLQKIPQDRPTSEVLLKHR 307 (348)
T ss_dssp CTT---SCHHHHHHHHHHTCSSGGGSCCHHHHTTCH
T ss_pred CCC---CCHHHHHHHHHHcccChhhCcCHHHHhhCh
Confidence 111 123477889999999999999999998763
No 171
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=3e-35 Score=310.63 Aligned_cols=244 Identities=19% Similarity=0.287 Sum_probs=187.0
Q ss_pred cCCCcCceecCCccceEEEEEec-CCcEEEEEEecccCCCCc--hhhHHHHHHHHH-----------HhhceeecCCeeE
Q 042123 588 NDFDAKYCIGNGGHASVYRAELP-SGEVVAVKKFHSLLPCDQ--TVDQKEFLTEVE-----------AFYGFCSHARHSF 653 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~--~~~~~~~~~ei~-----------~~~~~~~~~~~~~ 653 (849)
++|+..+.||+|+||.||+|+.. +++.||||.+........ ......+.+|+. .+++++......+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 56889999999999999999665 699999999875432211 112445555544 3677888888999
Q ss_pred EEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCC----cEEEeeecC
Q 042123 654 LLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEY----EAHVADFGI 729 (849)
Q Consensus 654 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~----~~kl~DfG~ 729 (849)
+||||+++++|.+++... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||.
T Consensus 85 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~ 158 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEK---ESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGI 158 (283)
T ss_dssp EEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCTT
T ss_pred EEEeecCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEeccc
Confidence 999999999999998643 3589999999999999999999999 999999999999998877 899999999
Q ss_pred CcccCCCCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCC
Q 042123 730 AKSLKPDSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLP 809 (849)
Q Consensus 730 a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 (849)
+....... ......+++.|+|||.+.+..++.++||||||+++|+|++|+.||...... .....+......
T Consensus 159 ~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~ 229 (283)
T 3bhy_A 159 AHKIEAGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQ--------ETLTNISAVNYD 229 (283)
T ss_dssp CEECC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHHHHTTCCC
T ss_pred ceeccCCC-cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchH--------HHHHHhHhcccC
Confidence 98765432 234457899999999999889999999999999999999999999743211 111111111211
Q ss_pred CCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 810 APSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 810 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
.+..........+.+++.+||+.||++|||++|++++
T Consensus 230 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 266 (283)
T 3bhy_A 230 FDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEH 266 (283)
T ss_dssp CCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHC
T ss_pred CcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhC
Confidence 1111111223457889999999999999999999875
No 172
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=2e-35 Score=320.31 Aligned_cols=250 Identities=23% Similarity=0.383 Sum_probs=179.7
Q ss_pred hcCCCcCceecCCccceEEEEEecCCcEEEEEEecccCCCCchhhHHHHH--HHHH-----------Hhhcee-----ec
Q 042123 587 TNDFDAKYCIGNGGHASVYRAELPSGEVVAVKKFHSLLPCDQTVDQKEFL--TEVE-----------AFYGFC-----SH 648 (849)
Q Consensus 587 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~--~ei~-----------~~~~~~-----~~ 648 (849)
.++|+..+.||+|+||.||+|+. +++.||||++.... ...+. .++. ++++++ ..
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~-------~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~ 83 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN-------RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADG 83 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG-------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTS
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc-------hhhHHHHHHHHHHHhccCcchhhheecccccccCC
Confidence 36889999999999999999977 58999999986431 11122 2221 233321 12
Q ss_pred CCeeEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcC------CCCeEecCCCCCCeeecCCCcE
Q 042123 649 ARHSFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDC------FPPIVHRDISSKNLLLDLEYEA 722 (849)
Q Consensus 649 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~------~~~ivH~dlk~~Nill~~~~~~ 722 (849)
....++||||+++|+|.+++.... .++.++..++.||+.||+|||+.. .++|+||||||+||+++.++.+
T Consensus 84 ~~~~~lv~e~~~~g~L~~~l~~~~----~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~ 159 (336)
T 3g2f_A 84 RMEYLLVMEYYPNGSLXKYLSLHT----SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTC 159 (336)
T ss_dssp CEEEEEEECCCTTCBHHHHHHHCC----BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCE
T ss_pred CceEEEEEecCCCCcHHHHHhhcc----cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcE
Confidence 336789999999999999996433 589999999999999999999862 2389999999999999999999
Q ss_pred EEeeecCCcccCCCC--------CCeeeccCCccccccccccC-------CCCCccchHHHHHHHHHHHHhCCCCCCccc
Q 042123 723 HVADFGIAKSLKPDS--------SNWTEFAGTCGYIAPELAYT-------MKITEKCDVYSFGVLMWEVIKGKHPRDFLS 787 (849)
Q Consensus 723 kl~DfG~a~~~~~~~--------~~~~~~~g~~~y~aPE~~~~-------~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~ 787 (849)
||+|||+++.+.... .......||+.|+|||++.+ ..++.++|||||||++|||++|..||....
T Consensus 160 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~ 239 (336)
T 3g2f_A 160 VISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGE 239 (336)
T ss_dssp EECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTS
T ss_pred EEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCcc
Confidence 999999998764321 11234568999999999876 456778999999999999999988765332
Q ss_pred cccccccc---------cccc-----cccccCCCCCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 788 SISSSSLN---------TDVA-----LDQMLDPRLPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 788 ~~~~~~~~---------~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
........ .... ......+.++............+.+++.+||+.||++|||++|+++.|+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~ 314 (336)
T 3g2f_A 240 SVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMA 314 (336)
T ss_dssp CCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred chhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHH
Confidence 21110000 0000 0011122222222222334556889999999999999999999999874
No 173
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=2.2e-35 Score=309.54 Aligned_cols=239 Identities=20% Similarity=0.327 Sum_probs=185.6
Q ss_pred cCCCcCceecCCccceEEEEEecCCcEEEEEEecccCCCCchhhHHHHHHHHHH-----------hhceeecC--CeeEE
Q 042123 588 NDFDAKYCIGNGGHASVYRAELPSGEVVAVKKFHSLLPCDQTVDQKEFLTEVEA-----------FYGFCSHA--RHSFL 654 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~~-----------~~~~~~~~--~~~~l 654 (849)
++|+..+.||+|+||.||+|+.. ++.||||++.... ......+.+.+|+.. +++++... ...++
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 86 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRD--WSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTL 86 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTT--CCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEE
T ss_pred HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccc--cCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEe
Confidence 57889999999999999999885 8999999987542 223334567777653 56676665 77899
Q ss_pred EEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCCeeecCCCcEEEeeecCCcc
Q 042123 655 LYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPP--IVHRDISSKNLLLDLEYEAHVADFGIAKS 732 (849)
Q Consensus 655 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~--ivH~dlk~~Nill~~~~~~kl~DfG~a~~ 732 (849)
||||+++|+|.+++.... ...+++.++..++.|++.||+|||+. + |+||||||+||+++.++.++++|||++..
T Consensus 87 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~ 162 (271)
T 3kmu_A 87 ITHWMPYGSLYNVLHEGT-NFVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVKFS 162 (271)
T ss_dssp EEECCTTCBHHHHHHSCS-SCCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCT
T ss_pred eecccCCCcHHHHHhhcc-cCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEeccceee
Confidence 999999999999997643 23589999999999999999999998 7 99999999999999999999999998765
Q ss_pred cCCCCCCeeeccCCccccccccccCCCCCc---cchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCC
Q 042123 733 LKPDSSNWTEFAGTCGYIAPELAYTMKITE---KCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLP 809 (849)
Q Consensus 733 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~---~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 (849)
.... ...+|+.|+|||.+.+..++. ++||||||+++|||++|+.||........ ..........+..+
T Consensus 163 ~~~~-----~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~ 233 (271)
T 3kmu_A 163 FQSP-----GRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEI----GMKVALEGLRPTIP 233 (271)
T ss_dssp TSCT-----TCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHH----HHHHHHSCCCCCCC
T ss_pred eccc-----CccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHH----HHHHHhcCCCCCCC
Confidence 4332 246899999999998765544 79999999999999999999974332110 00001111111111
Q ss_pred CCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 810 APSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 810 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
... ...+.+++.+||+.||++|||++++++.|+
T Consensus 234 --~~~----~~~~~~li~~~l~~~p~~Rps~~~il~~L~ 266 (271)
T 3kmu_A 234 --PGI----SPHVSKLMKICMNEDPAKRPKFDMIVPILE 266 (271)
T ss_dssp --TTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred --CCC----CHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 111 234788999999999999999999999875
No 174
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=2.2e-35 Score=318.07 Aligned_cols=243 Identities=26% Similarity=0.407 Sum_probs=180.3
Q ss_pred cCCCcCceecCCccceEEEEEec-CCcE----EEEEEecccCCCCc---hhhHHHHHH-----HHHHhhceeecCCeeEE
Q 042123 588 NDFDAKYCIGNGGHASVYRAELP-SGEV----VAVKKFHSLLPCDQ---TVDQKEFLT-----EVEAFYGFCSHARHSFL 654 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~----vavK~~~~~~~~~~---~~~~~~~~~-----ei~~~~~~~~~~~~~~l 654 (849)
++|+..+.||+|+||+||+|.+. +++. ||+|.+........ ...+...++ .+..+++++. ....++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence 57888999999999999999653 4544 78887754321111 111112221 2445777775 467889
Q ss_pred EEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccC
Q 042123 655 LYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLK 734 (849)
Q Consensus 655 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~ 734 (849)
||||+++|+|.+++.... ..+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 92 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~ 166 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQHR--GALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLP 166 (325)
T ss_dssp EEECCTTCBSHHHHHSSG--GGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGGSC
T ss_pred EEEeCCCCCHHHHHHHcc--ccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCcccccC
Confidence 999999999999997543 3589999999999999999999999 99999999999999999999999999998775
Q ss_pred CCCC--CeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCC-CCCC
Q 042123 735 PDSS--NWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIK-GKHPRDFLSSISSSSLNTDVALDQMLDP-RLPA 810 (849)
Q Consensus 735 ~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 810 (849)
.... ......++..|+|||.+.+..++.++||||||+++|||++ |+.||....... ....+... ....
T Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--------~~~~~~~~~~~~~ 238 (325)
T 3kex_A 167 PDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE--------VPDLLEKGERLAQ 238 (325)
T ss_dssp CCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTH--------HHHHHHTTCBCCC
T ss_pred cccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHH--------HHHHHHcCCCCCC
Confidence 4432 2344567889999999998999999999999999999999 999997533211 11111111 1111
Q ss_pred CChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 811 PSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 811 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
+.... ..+.+++.+||+.||++|||+.+++++|+
T Consensus 239 ~~~~~----~~~~~li~~~l~~dp~~Rps~~el~~~l~ 272 (325)
T 3kex_A 239 PQICT----IDVYMVMVKCWMIDENIRPTFKELANEFT 272 (325)
T ss_dssp CTTBC----TTTTHHHHHHTCSCTTTSCCHHHHHHHHH
T ss_pred CCcCc----HHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 11111 13678899999999999999999999874
No 175
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.7e-35 Score=327.78 Aligned_cols=254 Identities=20% Similarity=0.302 Sum_probs=190.8
Q ss_pred cCCCcCceecCCccceEEEEEec-CCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCC--eeE
Q 042123 588 NDFDAKYCIGNGGHASVYRAELP-SGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHAR--HSF 653 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~--~~~ 653 (849)
++|.+.+.||+|+||+||+|+.. +|+.||||++..... ......+.+|+. .+++++.... ..+
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 85 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF---LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKV 85 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG---GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccc---cchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeE
Confidence 57889999999999999999664 599999999875321 112334445544 3556665544 779
Q ss_pred EEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeee----cCCCcEEEeeecC
Q 042123 654 LLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLL----DLEYEAHVADFGI 729 (849)
Q Consensus 654 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill----~~~~~~kl~DfG~ 729 (849)
+||||+++|+|.+++........+++.++..++.||+.||+|||+. +|+||||||+||++ +.++.+||+|||+
T Consensus 86 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~ 162 (396)
T 4eut_A 86 LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGA 162 (396)
T ss_dssp EEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGG
T ss_pred EEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCC
Confidence 9999999999999998766555599999999999999999999999 99999999999999 7778899999999
Q ss_pred CcccCCCCCCeeeccCCccccccccccC--------CCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccc--
Q 042123 730 AKSLKPDSSNWTEFAGTCGYIAPELAYT--------MKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVA-- 799 (849)
Q Consensus 730 a~~~~~~~~~~~~~~g~~~y~aPE~~~~--------~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~-- 799 (849)
++...... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||................
T Consensus 163 a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~ 241 (396)
T 4eut_A 163 ARELEDDE-QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT 241 (396)
T ss_dssp CEECCCGG-GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHH
T ss_pred ceEccCCC-ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhc
Confidence 98765432 2344679999999998864 567889999999999999999999996432211000000000
Q ss_pred ---------ccc------ccCCCCCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 800 ---------LDQ------MLDPRLPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 800 ---------~~~------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
... ......+............+.+++.+||+.||++|||++|+++.++
T Consensus 242 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~ 305 (396)
T 4eut_A 242 GKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETS 305 (396)
T ss_dssp SCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHH
T ss_pred CCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHH
Confidence 000 0111222223334556667889999999999999999999988763
No 176
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.1e-36 Score=326.11 Aligned_cols=246 Identities=21% Similarity=0.341 Sum_probs=185.5
Q ss_pred cCCCcCceecCCccceEEEEEe----cCCcEEEEEEecccCC------CCchhhHHHHHHH------HHHhhceeecCCe
Q 042123 588 NDFDAKYCIGNGGHASVYRAEL----PSGEVVAVKKFHSLLP------CDQTVDQKEFLTE------VEAFYGFCSHARH 651 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~------~~~~~~~~~~~~e------i~~~~~~~~~~~~ 651 (849)
++|+..+.||+|+||.||+|+. .+++.||||++..... ......+...++. +..+++++.....
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 133 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 133 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence 6799999999999999999976 4789999999864211 1111223333333 3346778888889
Q ss_pred eEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCc
Q 042123 652 SFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAK 731 (849)
Q Consensus 652 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~ 731 (849)
.++||||+++|+|.+++... ..+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 134 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 207 (355)
T 1vzo_A 134 LHLILDYINGGELFTHLSQR---ERFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSK 207 (355)
T ss_dssp EEEEECCCCSCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEEE
T ss_pred EEEEeecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCCCe
Confidence 99999999999999999653 3589999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCC-CCeeeccCCccccccccccC--CCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCC
Q 042123 732 SLKPDS-SNWTEFAGTCGYIAPELAYT--MKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRL 808 (849)
Q Consensus 732 ~~~~~~-~~~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 808 (849)
.+.... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... ..............
T Consensus 208 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~----~~~~~~~~~~~~~~ 283 (355)
T 1vzo_A 208 EFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN----SQAEISRRILKSEP 283 (355)
T ss_dssp ECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCC----CHHHHHHHHHHCCC
T ss_pred ecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccc----hHHHHHHHHhccCC
Confidence 664322 22334679999999999885 347889999999999999999999997432111 11111112222222
Q ss_pred CCCChhhHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHhhh
Q 042123 809 PAPSRSAQEKLISIMEVAFSCFNESPESRP-----TMKIISQQL 847 (849)
Q Consensus 809 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~eil~~L 847 (849)
..+... ...+.+++.+||+.||++|| |++|++++.
T Consensus 284 ~~~~~~----~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 284 PYPQEM----SALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp CCCTTS----CHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred CCCccc----CHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 211112 23477899999999999999 999999875
No 177
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=6.1e-35 Score=311.53 Aligned_cols=239 Identities=26% Similarity=0.411 Sum_probs=189.0
Q ss_pred cCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeEEE
Q 042123 588 NDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSFLL 655 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~lV 655 (849)
+.|+..+.||+|+||.||+|.. .+++.||||.+...... .....+.+|+. .+++++......++|
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 98 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE---DEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWII 98 (303)
T ss_dssp GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCS---TTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccH---HHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEE
Confidence 5788999999999999999964 57899999998654321 22344555543 367778888899999
Q ss_pred EEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccCC
Q 042123 656 YEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLKP 735 (849)
Q Consensus 656 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~~ 735 (849)
|||+++++|.+++.. ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+.....
T Consensus 99 ~e~~~~~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~ 171 (303)
T 3a7i_A 99 MEYLGGGSALDLLEP----GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD 171 (303)
T ss_dssp EECCTTEEHHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBT
T ss_pred EEeCCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCc
Confidence 999999999999864 3489999999999999999999999 999999999999999999999999999987655
Q ss_pred CCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCChhh
Q 042123 736 DSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPAPSRSA 815 (849)
Q Consensus 736 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 815 (849)
.........|++.|+|||.+.+..++.++||||||+++|+|++|+.||......... ........+... ...
T Consensus 172 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-----~~~~~~~~~~~~--~~~- 243 (303)
T 3a7i_A 172 TQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVL-----FLIPKNNPPTLE--GNY- 243 (303)
T ss_dssp TBCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH-----HHHHHSCCCCCC--SSC-
T ss_pred cccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHH-----HHhhcCCCCCCc--ccc-
Confidence 443445567899999999999999999999999999999999999999743321100 000000011111 111
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHhhh
Q 042123 816 QEKLISIMEVAFSCFNESPESRPTMKIISQQL 847 (849)
Q Consensus 816 ~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L 847 (849)
...+.+++.+||+.||++|||+++++++.
T Consensus 244 ---~~~l~~li~~~l~~dp~~Rps~~~ll~~~ 272 (303)
T 3a7i_A 244 ---SKPLKEFVEACLNKEPSFRPTAKELLKHK 272 (303)
T ss_dssp ---CHHHHHHHHHHCCSSGGGSCCHHHHTTCH
T ss_pred ---CHHHHHHHHHHcCCChhhCcCHHHHhhCh
Confidence 22378899999999999999999998863
No 178
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.6e-35 Score=327.47 Aligned_cols=252 Identities=21% Similarity=0.349 Sum_probs=173.4
Q ss_pred HHhcCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHHHH------------HhhceeecC--
Q 042123 585 KATNDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE------------AFYGFCSHA-- 649 (849)
Q Consensus 585 ~~~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~------------~~~~~~~~~-- 649 (849)
...++|+..+.||+|+||.||+|.. .+|+.||||++..... .......+.+|+. .+++++...
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~ 83 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQ--NSTDAQRTFREIMILTELSGHENIVNLLNVLRADND 83 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--C--CHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTS
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEeccccc--ChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCC
Confidence 3457899999999999999999954 5799999999865322 2233344445543 245555433
Q ss_pred CeeEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecC
Q 042123 650 RHSFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGI 729 (849)
Q Consensus 650 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~ 729 (849)
...|+||||++ |+|.+++.. ..+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 84 ~~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~ 155 (388)
T 3oz6_A 84 RDVYLVFDYME-TDLHAVIRA----NILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGL 155 (388)
T ss_dssp SCEEEEEECCS-EEHHHHHHH----TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred CEEEEEecccC-cCHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCcc
Confidence 37899999998 589988864 3589999999999999999999999 999999999999999999999999999
Q ss_pred CcccCCC---------------------CCCeeeccCCccccccccccC-CCCCccchHHHHHHHHHHHHhCCCCCCccc
Q 042123 730 AKSLKPD---------------------SSNWTEFAGTCGYIAPELAYT-MKITEKCDVYSFGVLMWEVIKGKHPRDFLS 787 (849)
Q Consensus 730 a~~~~~~---------------------~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~ 787 (849)
|+.+... .......+||+.|+|||++.+ ..++.++||||+||++|||++|+.||...+
T Consensus 156 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~ 235 (388)
T 3oz6_A 156 SRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSS 235 (388)
T ss_dssp CEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 9865321 112344679999999999876 678999999999999999999999997543
Q ss_pred cccccc-------cccccccccc---------------c---CCCCCCCChhhH----------HHHHHHHHHHhhccCC
Q 042123 788 SISSSS-------LNTDVALDQM---------------L---DPRLPAPSRSAQ----------EKLISIMEVAFSCFNE 832 (849)
Q Consensus 788 ~~~~~~-------~~~~~~~~~~---------------~---~~~~~~~~~~~~----------~~~~~l~~li~~cl~~ 832 (849)
...... .......... . ............ .....+.+++.+||+.
T Consensus 236 ~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~ 315 (388)
T 3oz6_A 236 TMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQF 315 (388)
T ss_dssp HHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCS
T ss_pred HHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhcc
Confidence 211000 0000000000 0 000000000000 1123578999999999
Q ss_pred CCCCCCCHHHHHhh
Q 042123 833 SPESRPTMKIISQQ 846 (849)
Q Consensus 833 dP~~RPt~~eil~~ 846 (849)
||++|||++|+++|
T Consensus 316 dP~~R~t~~e~l~H 329 (388)
T 3oz6_A 316 NPNKRISANDALKH 329 (388)
T ss_dssp SGGGSCCHHHHTTS
T ss_pred CcccCCCHHHHhCC
Confidence 99999999999987
No 179
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.9e-35 Score=309.37 Aligned_cols=240 Identities=26% Similarity=0.434 Sum_probs=188.8
Q ss_pred hcCCCcCceecCCccceEEEEEecCCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeEEE
Q 042123 587 TNDFDAKYCIGNGGHASVYRAELPSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSFLL 655 (849)
Q Consensus 587 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~lV 655 (849)
.++|+..+.||+|+||.||+|...+++.||+|.+..... ..+.+.+|+. ++++++...+..++|
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 81 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-----SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLV 81 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-----CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEE
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-----CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEE
Confidence 367888999999999999999888889999999876422 1234555544 367778888899999
Q ss_pred EEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccCC
Q 042123 656 YEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLKP 735 (849)
Q Consensus 656 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~~ 735 (849)
|||+++|+|.+++.... ..+++.++..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++.....
T Consensus 82 ~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~ 156 (267)
T 3t9t_A 82 TEFMEHGCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD 156 (267)
T ss_dssp ECCCTTCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCC
T ss_pred EeCCCCCcHHHHHhhCc--ccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEccccccccccc
Confidence 99999999999996543 3589999999999999999999999 999999999999999999999999999986643
Q ss_pred CC-CCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCC-CCCCC
Q 042123 736 DS-SNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIK-GKHPRDFLSSISSSSLNTDVALDQMLDPR-LPAPS 812 (849)
Q Consensus 736 ~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 812 (849)
.. .......+++.|+|||.+.+..++.++||||+|+++|+|++ |+.||...... .....+.... ...+.
T Consensus 157 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--------~~~~~i~~~~~~~~~~ 228 (267)
T 3t9t_A 157 DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS--------EVVEDISTGFRLYKPR 228 (267)
T ss_dssp HHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--------HHHHHHHTTCCCCCCT
T ss_pred ccccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHH--------HHHHHHhcCCcCCCCc
Confidence 21 11223456778999999998899999999999999999999 89998743211 1111111111 11111
Q ss_pred hhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 813 RSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 813 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
.. ...+.+++.+||+.||++|||+++++++|+
T Consensus 229 ~~----~~~l~~li~~~l~~~p~~Rps~~~ll~~L~ 260 (267)
T 3t9t_A 229 LA----STHVYQIMNHCWRERPEDRPAFSRLLRQLA 260 (267)
T ss_dssp TS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred cC----cHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 11 234778999999999999999999999875
No 180
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=2.2e-35 Score=311.84 Aligned_cols=242 Identities=24% Similarity=0.362 Sum_probs=180.7
Q ss_pred cCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeEEE
Q 042123 588 NDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSFLL 655 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~lV 655 (849)
+.|...+.||+|+||.||+|+. .++..||+|++...... .....+.+|+. .+++++......++|
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~---~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 98 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQ---VPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIV 98 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCC---SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccc---hhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEE
Confidence 6789999999999999999965 57899999998764321 12344555544 367888888999999
Q ss_pred EEeccCCChhhhhcccc-cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeee---cCCCcEEEeeecCCc
Q 042123 656 YEFLERGSLAAILNTDA-AAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLL---DLEYEAHVADFGIAK 731 (849)
Q Consensus 656 ~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~DfG~a~ 731 (849)
|||+++|+|.+++.... ....+++.++..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||++.
T Consensus 99 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~ 175 (285)
T 3is5_A 99 METCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAE 175 (285)
T ss_dssp ECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCCC
T ss_pred EEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecce
Confidence 99999999999986542 235689999999999999999999999 99999999999999 456889999999998
Q ss_pred ccCCCCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCC
Q 042123 732 SLKPDSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPAP 811 (849)
Q Consensus 732 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (849)
...... ......|++.|+|||.+. ..++.++||||+|+++|||++|+.||......... .......+.....
T Consensus 176 ~~~~~~-~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~------~~~~~~~~~~~~~ 247 (285)
T 3is5_A 176 LFKSDE-HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQ------QKATYKEPNYAVE 247 (285)
T ss_dssp C-----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH------HHHHHCCCCCCC-
T ss_pred ecCCcc-cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHH------hhhccCCcccccc
Confidence 765432 234567899999999875 56899999999999999999999999743311100 0000011111110
Q ss_pred ChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 812 SRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 812 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
.. .....+.+++.+||+.||++|||++|++++
T Consensus 248 ~~---~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 279 (285)
T 3is5_A 248 CR---PLTPQAVDLLKQMLTKDPERRPSAAQVLHH 279 (285)
T ss_dssp -C---CCCHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred cC---cCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00 012347789999999999999999999976
No 181
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=1.3e-35 Score=325.97 Aligned_cols=246 Identities=11% Similarity=0.035 Sum_probs=176.3
Q ss_pred cCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHHH---HHhh-----------------cee
Q 042123 588 NDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTEV---EAFY-----------------GFC 646 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~ei---~~~~-----------------~~~ 646 (849)
.+|...+.||+|+||.||+|++ .+++.||||++...... .......+.+|+ ..+. +++
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAEN-SRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTT-HHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccc-cccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 4588899999999999999975 47899999999764321 222233333331 1111 222
Q ss_pred ecC-----------------CeeEEEEEeccCCChhhhhcccccccCCCHHHH------HHHHHHHHHHHHHHHhcCCCC
Q 042123 647 SHA-----------------RHSFLLYEFLERGSLAAILNTDAAAQELGWSQR------MNVIKAVAHALSYLHHDCFPP 703 (849)
Q Consensus 647 ~~~-----------------~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~------~~i~~~ia~~l~~LH~~~~~~ 703 (849)
... ...++||||++ |+|.+++.... ..+++..+ ..++.||+.||+|||+. +
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~--~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~ 214 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD--FVYVFRGDEGILALHILTAQLIRLAANLQSK---G 214 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH--HSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc--cccchhhhhhhhhHHHHHHHHHHHHHHHHHC---C
Confidence 111 34799999999 89999997643 23455566 78889999999999999 9
Q ss_pred eEecCCCCCCeeecCCCcEEEeeecCCcccCCCCCCeeeccCCccccccccccC--CCCCccchHHHHHHHHHHHHhCCC
Q 042123 704 IVHRDISSKNLLLDLEYEAHVADFGIAKSLKPDSSNWTEFAGTCGYIAPELAYT--MKITEKCDVYSFGVLMWEVIKGKH 781 (849)
Q Consensus 704 ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~SlGvil~el~tg~~ 781 (849)
|+||||||+|||++.++.+||+|||+++.... ......+|+.|+|||++.+ ..++.++|||||||++|||++|+.
T Consensus 215 ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~ 291 (371)
T 3q60_A 215 LVHGHFTPDNLFIMPDGRLMLGDVSALWKVGT---RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFL 291 (371)
T ss_dssp EEETTCSGGGEEECTTSCEEECCGGGEEETTC---EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSC
T ss_pred CccCcCCHHHEEECCCCCEEEEecceeeecCC---CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999986542 2224567799999999987 678999999999999999999999
Q ss_pred CCCccccccccccccccccccccCCCCCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 782 PRDFLSSISSSSLNTDVALDQMLDPRLPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 782 Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
||.............. ............+ ........+.+++.+||+.||++|||++++++|
T Consensus 292 Pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 353 (371)
T 3q60_A 292 PFGLVTPGIKGSWKRP-SLRVPGTDSLAFG--SCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMET 353 (371)
T ss_dssp STTBCCTTCTTCCCBC-CTTSCCCCSCCCT--TSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTS
T ss_pred CCCCcCcccccchhhh-hhhhccccccchh--hccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 9985432211111100 0000011111111 011122347889999999999999999999875
No 182
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=1.1e-35 Score=320.17 Aligned_cols=250 Identities=22% Similarity=0.385 Sum_probs=192.6
Q ss_pred HHHHHhcCCCcCceecCCccceEEEEEec------CCcEEEEEEecccCCCCchhhHHHHHHHHH-----------Hhhc
Q 042123 582 EIVKATNDFDAKYCIGNGGHASVYRAELP------SGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYG 644 (849)
Q Consensus 582 ~~~~~~~~f~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~ 644 (849)
++....++|+..+.||+|+||.||+|... +++.||||.+.... .......+.+|+. ++++
T Consensus 19 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~ 95 (322)
T 1p4o_A 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA---SMRERIEFLNEASVMKEFNCHHVVRLLG 95 (322)
T ss_dssp TTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS---CHHHHHHHHHHHHHGGGCCCTTBCCEEE
T ss_pred hhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEeccccc---CHHHHHHHHHHHHHHHhcCCCCEeeeEE
Confidence 34445678999999999999999999653 47889999986532 2233445666655 3667
Q ss_pred eeecCCeeEEEEEeccCCChhhhhcccccc-------cCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeec
Q 042123 645 FCSHARHSFLLYEFLERGSLAAILNTDAAA-------QELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLD 717 (849)
Q Consensus 645 ~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~-------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~ 717 (849)
++.+....++||||+++|+|.+++...... ..+++.++..++.|++.||+|||+. +|+||||||+||+++
T Consensus 96 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~ 172 (322)
T 1p4o_A 96 VVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVA 172 (322)
T ss_dssp EECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEEC
T ss_pred EEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEc
Confidence 788888999999999999999999754321 3578999999999999999999999 999999999999999
Q ss_pred CCCcEEEeeecCCcccCCCCCC--eeeccCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCcccccccccc
Q 042123 718 LEYEAHVADFGIAKSLKPDSSN--WTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIK-GKHPRDFLSSISSSSL 794 (849)
Q Consensus 718 ~~~~~kl~DfG~a~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~t-g~~Pf~~~~~~~~~~~ 794 (849)
.++.+||+|||+++........ .....+++.|+|||.+.+..++.++||||+|+++|||++ |+.||......
T Consensus 173 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~----- 247 (322)
T 1p4o_A 173 EDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE----- 247 (322)
T ss_dssp TTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHH-----
T ss_pred CCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHH-----
Confidence 9999999999999865432211 122346788999999998899999999999999999999 89998743211
Q ss_pred ccccccccccCCCCCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 795 NTDVALDQMLDPRLPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
.....+.......... .....+.+++.+||+.||++|||+.|++++|+
T Consensus 248 ---~~~~~~~~~~~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~ 295 (322)
T 1p4o_A 248 ---QVLRFVMEGGLLDKPD---NCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 295 (322)
T ss_dssp ---HHHHHHHTTCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHG
T ss_pred ---HHHHHHHcCCcCCCCC---CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 1112222222211111 11234778999999999999999999999885
No 183
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=1.1e-35 Score=323.16 Aligned_cols=248 Identities=19% Similarity=0.238 Sum_probs=177.3
Q ss_pred cCCCcCceecCCccceEEEEEec----CCcEEEEEEecccCCCCchhhHH---------HHHHHHH-----------Hhh
Q 042123 588 NDFDAKYCIGNGGHASVYRAELP----SGEVVAVKKFHSLLPCDQTVDQK---------EFLTEVE-----------AFY 643 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~---------~~~~ei~-----------~~~ 643 (849)
++|...+.||+|+||.||+|... ++..+|||++..... ...... .+.+|+. .++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~--~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~ 114 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENG--PLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFY 114 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-C--HHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCc--chHHHHHHHHHHhhhHHHHHHHhhccccccCcceee
Confidence 57899999999999999999764 578899999875421 111111 2223322 355
Q ss_pred ceeec----CCeeEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCC
Q 042123 644 GFCSH----ARHSFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLE 719 (849)
Q Consensus 644 ~~~~~----~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~ 719 (849)
+++.. ....++||||+ +++|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+||+++.+
T Consensus 115 ~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~ 187 (345)
T 2v62_A 115 GSGLTEFKGRSYRFMVMERL-GIDLQKISGQNG---TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYK 187 (345)
T ss_dssp EEEEEESSSCEEEEEEEECE-EEEHHHHCBGGG---BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESS
T ss_pred cccccccCCCcEEEEEEecc-CCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccC
Confidence 66655 67899999999 999999997543 589999999999999999999999 99999999999999988
Q ss_pred C--cEEEeeecCCcccCCCCC-------CeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCcccccc
Q 042123 720 Y--EAHVADFGIAKSLKPDSS-------NWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSIS 790 (849)
Q Consensus 720 ~--~~kl~DfG~a~~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~ 790 (849)
+ .+||+|||+++.+..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus 188 ~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~ 267 (345)
T 2v62_A 188 NPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDP 267 (345)
T ss_dssp STTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCH
T ss_pred CCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcccccccc
Confidence 7 999999999986643211 1244578999999999999999999999999999999999999996321110
Q ss_pred ccccccccccccccCCCCCCCChh---hHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 791 SSSLNTDVALDQMLDPRLPAPSRS---AQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
.. ...........++..... .......+.+++.+||+.||++|||+++|++.|+
T Consensus 268 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~ 324 (345)
T 2v62_A 268 VA----VQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILN 324 (345)
T ss_dssp HH----HHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHC
T ss_pred HH----HHHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHh
Confidence 00 000000001111100000 0011235889999999999999999999999885
No 184
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=4.8e-35 Score=318.20 Aligned_cols=250 Identities=24% Similarity=0.364 Sum_probs=187.3
Q ss_pred HHHHHHHhcCCCcCceecCCccceEEEEEecCCcEEEEEEecccCCCCchhhHHHHHHHH-------------HHhhcee
Q 042123 580 YDEIVKATNDFDAKYCIGNGGHASVYRAELPSGEVVAVKKFHSLLPCDQTVDQKEFLTEV-------------EAFYGFC 646 (849)
Q Consensus 580 ~~~~~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~ei-------------~~~~~~~ 646 (849)
........++|+..+.||+|+||.||+|+. +++.||||.+.... ...+.+|+ ..+++++
T Consensus 34 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~-------~~~~~~e~~~~~~~~l~h~ni~~~~~~~ 105 (342)
T 1b6c_B 34 LLVQRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE-------ERSWFREAEIYQTVMLRHENILGFIAAD 105 (342)
T ss_dssp HHHHHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGGG-------HHHHHHHHHHHHHSCCCCTTBCCEEEEE
T ss_pred eeecccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCchh-------HHHHHHHHHHHHHhhcCCCcEEEEEeee
Confidence 333445668999999999999999999988 48999999986431 12222332 2356666
Q ss_pred ecCC----eeEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCeEecCCCCCCe
Q 042123 647 SHAR----HSFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLH--------HDCFPPIVHRDISSKNL 714 (849)
Q Consensus 647 ~~~~----~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH--------~~~~~~ivH~dlk~~Ni 714 (849)
.... ..++||||+++|+|.+++.+. .+++.+++.++.|++.||+||| +. +|+||||||+||
T Consensus 106 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NI 178 (342)
T 1b6c_B 106 NKDNGTWTQLWLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNI 178 (342)
T ss_dssp ECCCSSCCCEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGE
T ss_pred cccCCccceeEEEEeecCCCcHHHHHhcc----CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHE
Confidence 6554 789999999999999999643 4899999999999999999999 66 999999999999
Q ss_pred eecCCCcEEEeeecCCcccCCCCCC----eeeccCCccccccccccCC------CCCccchHHHHHHHHHHHHhC-----
Q 042123 715 LLDLEYEAHVADFGIAKSLKPDSSN----WTEFAGTCGYIAPELAYTM------KITEKCDVYSFGVLMWEVIKG----- 779 (849)
Q Consensus 715 ll~~~~~~kl~DfG~a~~~~~~~~~----~~~~~g~~~y~aPE~~~~~------~~~~~~Dv~SlGvil~el~tg----- 779 (849)
+++.++.+||+|||++......... .....||+.|+|||.+.+. .++.++||||||+++|||++|
T Consensus 179 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~ 258 (342)
T 1b6c_B 179 LVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGG 258 (342)
T ss_dssp EECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTT
T ss_pred EECCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCC
Confidence 9999999999999999876543321 2345789999999998765 334789999999999999999
Q ss_pred -----CCCCCccccccccccccccccccc----cCCCCCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 780 -----KHPRDFLSSISSSSLNTDVALDQM----LDPRLPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 780 -----~~Pf~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
+.||....... .........+ ..+.++... ...+....+.+++.+||+.||++|||+++|+++|+
T Consensus 259 ~~~~~~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~ 332 (342)
T 1b6c_B 259 IHEDYQLPYYDLVPSD---PSVEEMRKVVCEQKLRPNIPNRW-QSCEALRVMAKIMRECWYANGAARLTALRIKKTLS 332 (342)
T ss_dssp BCCCCCCTTTTTSCSS---CCHHHHHHHHTTSCCCCCCCGGG-GTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHH
T ss_pred cccccccCccccCcCc---ccHHHHHHHHHHHHhCCCCcccc-cchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHH
Confidence 67775332111 0111111111 122222111 12345567889999999999999999999999885
No 185
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.6e-35 Score=320.46 Aligned_cols=240 Identities=25% Similarity=0.433 Sum_probs=174.0
Q ss_pred CCCcCceecCCccceEEEEEec--C--CcEEEEEEecccCCCCchhhHHHHHHHHH-----------Hhhceee-cCCee
Q 042123 589 DFDAKYCIGNGGHASVYRAELP--S--GEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCS-HARHS 652 (849)
Q Consensus 589 ~f~~~~~lG~G~~g~Vy~~~~~--~--~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~-~~~~~ 652 (849)
.|...+.||+|+||.||+|.+. + +..||||.+... ......+.+.+|+. ++++++. .++..
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ 166 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI---TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP 166 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSC---SCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCC
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCC---CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCe
Confidence 4566789999999999999653 2 236899987643 22234556777755 3566654 45678
Q ss_pred EEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcc
Q 042123 653 FLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKS 732 (849)
Q Consensus 653 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~ 732 (849)
++||||+++|+|.+++.... ..+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 167 ~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~ 241 (373)
T 3c1x_A 167 LVVLPYMKHGDLRNFIRNET--HNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARD 241 (373)
T ss_dssp EEEEECCTTCBHHHHHHCTT--CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-----
T ss_pred EEEEECCCCCCHHHHHhhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeecccccc
Confidence 99999999999999996543 3588999999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCC----CeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCC
Q 042123 733 LKPDSS----NWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIK-GKHPRDFLSSISSSSLNTDVALDQMLDPR 807 (849)
Q Consensus 733 ~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 807 (849)
...... ......+++.|+|||.+.+..++.++||||||+++|||++ |..||....... ....+....
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~--------~~~~~~~~~ 313 (373)
T 3c1x_A 242 MYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD--------ITVYLLQGR 313 (373)
T ss_dssp ----------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC--------HHHHHHTTC
T ss_pred ccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH--------HHHHHHcCC
Confidence 643221 1233456788999999999999999999999999999999 677776432211 111111111
Q ss_pred C-CCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 808 L-PAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 808 ~-~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
. ..+... ...+.+++.+||+.||++|||++|++++|+
T Consensus 314 ~~~~p~~~----~~~l~~li~~cl~~dp~~RPs~~ell~~L~ 351 (373)
T 3c1x_A 314 RLLQPEYC----PDPLYEVMLKCWHPKAEMRPSFSELVSRIS 351 (373)
T ss_dssp CCCCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCCCCC----CHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 1 111112 224788999999999999999999999874
No 186
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=2.1e-34 Score=313.72 Aligned_cols=306 Identities=23% Similarity=0.353 Sum_probs=142.4
Q ss_pred ccCCCCCCEeeCCCCcCcccccccccccCCCCCccccCeEeccCCcccccCCccCCCCCCCCEEEccCCcccCCCCCCCc
Q 042123 50 ISNLSNLRYLYLGSNQFSGNILAEVSSESSGGNLRYMSRLVINDNSLSGFIPPHIGNLKFLSQLDLTNNKFSGPIPLSFD 129 (849)
Q Consensus 50 ~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~ 129 (849)
+..+++|++|++++|.++.. ..+..+++|++|++++|.+++..+ +.++++|++|++++|+++++ .+|.
T Consensus 40 ~~~l~~L~~L~l~~~~i~~~--------~~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~~--~~~~ 107 (347)
T 4fmz_A 40 QEELESITKLVVAGEKVASI--------QGIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITDI--SALQ 107 (347)
T ss_dssp HHHHTTCSEEECCSSCCCCC--------TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGT
T ss_pred chhcccccEEEEeCCccccc--------hhhhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccCc--hHHc
Confidence 44566666666666665421 123445555555555555553322 55555555555555555532 2355
Q ss_pred CCCCCceeeccCcccccccccccCCCCCCCEEEcCCCcccccCCcCCCCCCCCCEEEccCCCCcCcCcccccCCCCCCEE
Q 042123 130 NLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLNDNQLIGYIPRPFSNLTSVSTLRLSRNDLFGSIPDEIGKMRSLSVL 209 (849)
Q Consensus 130 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 209 (849)
++++|++|++++|.+++..+ +..+++|+.|++++|...... ..+..+++|++|++++|++....+ +..+++|++|
T Consensus 108 ~l~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~-~~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L 182 (347)
T 4fmz_A 108 NLTNLRELYLNEDNISDISP--LANLTKMYSLNLGANHNLSDL-SPLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSL 182 (347)
T ss_dssp TCTTCSEEECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCC-GGGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEE
T ss_pred CCCcCCEEECcCCcccCchh--hccCCceeEEECCCCCCcccc-cchhhCCCCcEEEecCCCcCCchh--hccCCCCCEE
Confidence 55555555555555543222 455555555555555333222 224555555555555555542221 4445555555
Q ss_pred eccCCcCccCCCcCccCccccchhhhccccccCCCCcchhhhhhhhhhccCcCCCCCCCcccCCCCCcceeeeccccccc
Q 042123 210 DLNQNQFKGVLPPSISNLTNLKELALLYNHLSGSIPPSLGNLILRQLLLSGNHFTGYLPYNICRGGALEIFTVSENHFQG 289 (849)
Q Consensus 210 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~N~l~~ 289 (849)
++++|.+.+..+ +..+++|+.|++++|.+. +..+ +..+++|+.|++++|++++
T Consensus 183 ~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~-----------------------~~~~--~~~~~~L~~L~l~~n~l~~ 235 (347)
T 4fmz_A 183 SLNYNQIEDISP--LASLTSLHYFTAYVNQIT-----------------------DITP--VANMTRLNSLKIGNNKITD 235 (347)
T ss_dssp ECTTSCCCCCGG--GGGCTTCCEEECCSSCCC-----------------------CCGG--GGGCTTCCEEECCSSCCCC
T ss_pred EccCCccccccc--ccCCCccceeecccCCCC-----------------------CCch--hhcCCcCCEEEccCCccCC
Confidence 555555543211 444444444444444443 1111 2333444444444444443
Q ss_pred ccCCCCCCcccccEEEccCccccCchhhhhCCCCCCCEEeccCccccCcccccCCCCCCCcEEeccCCccccCCCCCccc
Q 042123 290 TIPTSLRNCTSLIRVRLNGNNLTGNISEALGIYPNLTFIDLSRNNFYGEISSNWGKFPKLGTLNVSMNNITGGLPREIGN 369 (849)
Q Consensus 290 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~ 369 (849)
..+ +..+++|++|++++|.+++. ..+..+++|++|++++|++.+. ..+..+++|+.|++++|.+++..|..+..
T Consensus 236 ~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~ 309 (347)
T 4fmz_A 236 LSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGG 309 (347)
T ss_dssp CGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHT
T ss_pred Ccc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhc
Confidence 322 44444555555555554432 2344444555555555544432 22444444555555555444444444444
Q ss_pred cccccccccccccccccCchhhcCCCCCcEEEccCccc
Q 042123 370 SSQLQAFDLSLNHIVGEIPKELGKLNPLTKLILRGNQI 407 (849)
Q Consensus 370 l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l 407 (849)
+++|+.|++++|++++..| +..+++|++|++++|+|
T Consensus 310 l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i 345 (347)
T 4fmz_A 310 LTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVI 345 (347)
T ss_dssp CTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC--
T ss_pred cccCCEEEccCCccccccC--hhhhhccceeehhhhcc
Confidence 4444444454444443333 44444455555555444
No 187
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.5e-35 Score=315.23 Aligned_cols=247 Identities=22% Similarity=0.332 Sum_probs=180.0
Q ss_pred HhcCCCcCceecCCccceEEEEEec-CCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeE
Q 042123 586 ATNDFDAKYCIGNGGHASVYRAELP-SGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSF 653 (849)
Q Consensus 586 ~~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~ 653 (849)
..++|+..+.||+|+||.||+|... +++.||||.+...... .......+.+|+. .+++++...+..+
T Consensus 32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~ 110 (309)
T 2h34_A 32 QFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSS-DPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLY 110 (309)
T ss_dssp --CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGG-SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEE
T ss_pred EeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCccccc-CHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEE
Confidence 3478999999999999999999654 7899999998754221 1222345556654 3677888889999
Q ss_pred EEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCccc
Q 042123 654 LLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSL 733 (849)
Q Consensus 654 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~ 733 (849)
+||||+++++|.+++... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 111 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 184 (309)
T 2h34_A 111 VDMRLINGVDLAAMLRRQ---GPLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASAT 184 (309)
T ss_dssp EEEECCCCEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC----
T ss_pred EEEEecCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCccc
Confidence 999999999999999653 3589999999999999999999999 9999999999999999999999999999866
Q ss_pred CCCC-CCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCC
Q 042123 734 KPDS-SNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPAPS 812 (849)
Q Consensus 734 ~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (849)
.... .......+++.|+|||.+.+..++.++||||||+++|||++|+.||...... .....+....+.+.
T Consensus 185 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---------~~~~~~~~~~~~~~ 255 (309)
T 2h34_A 185 TDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS---------VMGAHINQAIPRPS 255 (309)
T ss_dssp ------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH---------HHHHHHHSCCCCGG
T ss_pred cccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH---------HHHHHhccCCCCcc
Confidence 5432 2233457899999999999989999999999999999999999999743321 01111111111111
Q ss_pred hhhHHHHHHHHHHHhhccCCCCCCCC-CHHHHHhhhc
Q 042123 813 RSAQEKLISIMEVAFSCFNESPESRP-TMKIISQQLR 848 (849)
Q Consensus 813 ~~~~~~~~~l~~li~~cl~~dP~~RP-t~~eil~~L~ 848 (849)
.........+.+++.+||+.||++|| |++++++.|+
T Consensus 256 ~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~ 292 (309)
T 2h34_A 256 TVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAH 292 (309)
T ss_dssp GTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred ccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHH
Confidence 11111222477899999999999999 9999998874
No 188
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=3.3e-35 Score=313.48 Aligned_cols=249 Identities=22% Similarity=0.382 Sum_probs=185.4
Q ss_pred cCCCcCceecCCccceEEEEEe-----cCCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecC--
Q 042123 588 NDFDAKYCIGNGGHASVYRAEL-----PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHA-- 649 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~-- 649 (849)
+.|+..+.||+|+||.||+|++ .+++.||||++..... ......+.+|+. .+++++...
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 97 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG---GNHIADLKKEIEILRNLYHENIVKYKGICTEDGG 97 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC--------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEeccccc---chhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCC
Confidence 4688889999999999999973 4689999999875422 122344555554 256666655
Q ss_pred CeeEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecC
Q 042123 650 RHSFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGI 729 (849)
Q Consensus 650 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~ 729 (849)
...++||||+++|+|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 98 ~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~ 172 (302)
T 4e5w_A 98 NGIKLIMEFLPSGSLKEYLPKNK--NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGL 172 (302)
T ss_dssp CCEEEEEECCTTCBHHHHHHHHT--TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTT
T ss_pred ceEEEEEEeCCCCcHHHHHHhcc--ccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECcccc
Confidence 56899999999999999996443 3589999999999999999999999 999999999999999999999999999
Q ss_pred CcccCCCCC---CeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCcccccc------c-cccccccc
Q 042123 730 AKSLKPDSS---NWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSIS------S-SSLNTDVA 799 (849)
Q Consensus 730 a~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~------~-~~~~~~~~ 799 (849)
+........ ......+|..|+|||.+.+..++.++||||+|+++|||++|+.|+....... . ........
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 252 (302)
T 4e5w_A 173 TKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRL 252 (302)
T ss_dssp CEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHH
T ss_pred cccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHH
Confidence 987765432 2234567888999999999999999999999999999999999865321100 0 00000111
Q ss_pred cccccCC-CCCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 800 LDQMLDP-RLPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 800 ~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
....... ..+.+... ...+.+++.+||+.||++|||++++++.|+
T Consensus 253 ~~~~~~~~~~~~~~~~----~~~l~~li~~~l~~dp~~Rps~~~ll~~L~ 298 (302)
T 4e5w_A 253 VNTLKEGKRLPCPPNC----PDEVYQLMRKCWEFQPSNRTSFQNLIEGFE 298 (302)
T ss_dssp HHHHHTTCCCCCCTTC----CHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHhccCCCCCCCCC----CHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Confidence 1111111 11111112 234889999999999999999999999875
No 189
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=3.1e-35 Score=315.57 Aligned_cols=241 Identities=25% Similarity=0.413 Sum_probs=183.5
Q ss_pred HhcCCCcCceecCCccceEEEEEec-CCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeE
Q 042123 586 ATNDFDAKYCIGNGGHASVYRAELP-SGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSF 653 (849)
Q Consensus 586 ~~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~ 653 (849)
..++|+..+.||+|+||.||+|... +|+.||||.+..... ...+.+|+. .+++++......+
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~------~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 100 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD------LQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLW 100 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTSC------CHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchHH------HHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEE
Confidence 4578999999999999999999664 689999999875321 123344433 4677888888999
Q ss_pred EEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCccc
Q 042123 654 LLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSL 733 (849)
Q Consensus 654 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~ 733 (849)
+||||+++|+|.+++... ...+++.++..++.|++.||+|||+. +++||||||+||+++.++.+||+|||.+...
T Consensus 101 lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 175 (314)
T 3com_A 101 IVMEYCGAGSVSDIIRLR--NKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQL 175 (314)
T ss_dssp EEEECCTTEEHHHHHHHH--TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEeecCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhh
Confidence 999999999999998632 24589999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCh
Q 042123 734 KPDSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPAPSR 813 (849)
Q Consensus 734 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 813 (849)
...........|++.|+|||.+.+..++.++||||||+++|+|++|+.||......... ........+....+
T Consensus 176 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~~-- 248 (314)
T 3com_A 176 TDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAI-----FMIPTNPPPTFRKP-- 248 (314)
T ss_dssp BTTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHH-----HHHHHSCCCCCSSG--
T ss_pred hhhccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHH-----HHHhcCCCcccCCc--
Confidence 54433445567899999999999989999999999999999999999999743321100 00000011111111
Q ss_pred hhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 814 SAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 814 ~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
......+.+++.+||+.||++|||+.+++++
T Consensus 249 --~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~ 279 (314)
T 3com_A 249 --ELWSDNFTDFVKQCLVKSPEQRATATQLLQH 279 (314)
T ss_dssp --GGSCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred --ccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 1122347889999999999999999999875
No 190
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.6e-35 Score=314.33 Aligned_cols=241 Identities=27% Similarity=0.462 Sum_probs=180.8
Q ss_pred cCCCcCceecCCccceEEEEEecC-----CcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCe
Q 042123 588 NDFDAKYCIGNGGHASVYRAELPS-----GEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARH 651 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~ 651 (849)
.+|+..+.||+|+||.||+|.... +..||||.+.... .......+.+|+. ++++++...+.
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 120 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY---TEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKP 120 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC---CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCC
Confidence 456678899999999999996542 2459999987532 2233445666654 36778888889
Q ss_pred eEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCc
Q 042123 652 SFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAK 731 (849)
Q Consensus 652 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~ 731 (849)
.++||||+++|+|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 121 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~ 195 (333)
T 1mqb_A 121 MMIITEYMENGALDKFLREKD--GEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSR 195 (333)
T ss_dssp EEEEEECCTTEEHHHHHHHTT--TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC--
T ss_pred cEEEEeCCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcch
Confidence 999999999999999986532 4589999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCC---eeeccCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCC-
Q 042123 732 SLKPDSSN---WTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIK-GKHPRDFLSSISSSSLNTDVALDQMLDP- 806 (849)
Q Consensus 732 ~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~- 806 (849)
........ .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||...... .....+.+.
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~--------~~~~~~~~~~ 267 (333)
T 1mqb_A 196 VLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH--------EVMKAINDGF 267 (333)
T ss_dssp ---------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--------HHHHHHHTTC
T ss_pred hhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH--------HHHHHHHCCC
Confidence 76543221 122345778999999999999999999999999999999 99999643221 111222222
Q ss_pred CCCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 807 RLPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 807 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
+.+.+... ...+.+++.+||+.||++|||+.+++++|+
T Consensus 268 ~~~~~~~~----~~~l~~li~~~l~~~p~~Rps~~~l~~~L~ 305 (333)
T 1mqb_A 268 RLPTPMDC----PSAIYQLMMQCWQQERARRPKFADIVSILD 305 (333)
T ss_dssp CCCCCTTC----BHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred cCCCcccC----CHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 12222222 234788999999999999999999999874
No 191
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=9.5e-35 Score=311.13 Aligned_cols=250 Identities=19% Similarity=0.290 Sum_probs=179.5
Q ss_pred hcCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeEE
Q 042123 587 TNDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSFL 654 (849)
Q Consensus 587 ~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~l 654 (849)
.++|++.+.||+|+||.||+|.. .+|+.||||++..... ........+.+|+. ++++++...+..++
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 109 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDL-MDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNI 109 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSS-CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhc-cCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEE
Confidence 35799999999999999999965 5799999999875322 12233455666654 35678888889999
Q ss_pred EEEeccCCChhhhhcccc-cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCccc
Q 042123 655 LYEFLERGSLAAILNTDA-AAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSL 733 (849)
Q Consensus 655 V~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~ 733 (849)
||||+++|+|.+++.... ....+++.+++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||++...
T Consensus 110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~ 186 (310)
T 2wqm_A 110 VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFF 186 (310)
T ss_dssp EEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC------
T ss_pred EEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeee
Confidence 999999999999986532 234589999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCh
Q 042123 734 KPDSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPAPSR 813 (849)
Q Consensus 734 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 813 (849)
...........+++.|+|||.+.+..++.++||||||+++|+|++|+.||...... .......+.....+...
T Consensus 187 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~------~~~~~~~~~~~~~~~~~- 259 (310)
T 2wqm_A 187 SSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN------LYSLCKKIEQCDYPPLP- 259 (310)
T ss_dssp ------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CC------HHHHHHHHHTTCSCCCC-
T ss_pred cCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchh------HHHHHHHhhcccCCCCc-
Confidence 54443344567899999999999999999999999999999999999998643211 01111111111111111
Q ss_pred hhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 814 SAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 814 ~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
.......+.+++.+||+.||++|||+++|++.|+
T Consensus 260 -~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~ 293 (310)
T 2wqm_A 260 -SDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAK 293 (310)
T ss_dssp -TTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -ccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 0111234788999999999999999999998874
No 192
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1.7e-35 Score=313.47 Aligned_cols=242 Identities=25% Similarity=0.429 Sum_probs=189.7
Q ss_pred HhcCCCcCceecCCccceEEEEEec-CCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeE
Q 042123 586 ATNDFDAKYCIGNGGHASVYRAELP-SGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSF 653 (849)
Q Consensus 586 ~~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~ 653 (849)
..++|+..+.||+|+||.||+|... ++..||||.+.... ...+.+.+|+. .+++++......+
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 85 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-----MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 85 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-----THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-----HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEE
Confidence 4578889999999999999999665 58899999986532 22344555544 3677888888999
Q ss_pred EEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCccc
Q 042123 654 LLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSL 733 (849)
Q Consensus 654 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~ 733 (849)
+||||+++|+|.+++.... ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+...
T Consensus 86 ~v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~ 161 (288)
T 3kfa_A 86 IITEFMTYGNLLDYLRECN-RQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM 161 (288)
T ss_dssp EEEECCTTEEHHHHHHHCC-TTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTS
T ss_pred EEEEcCCCCcHHHHHHhcc-cCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceec
Confidence 9999999999999996543 24589999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCC-eeeccCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCC-CCCC
Q 042123 734 KPDSSN-WTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIK-GKHPRDFLSSISSSSLNTDVALDQMLDP-RLPA 810 (849)
Q Consensus 734 ~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 810 (849)
...... .....+++.|+|||.+.+..++.++||||+|+++|+|++ |..||....... ....+... ....
T Consensus 162 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~--------~~~~~~~~~~~~~ 233 (288)
T 3kfa_A 162 TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--------VYELLEKDYRMER 233 (288)
T ss_dssp CSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG--------HHHHHHTTCCCCC
T ss_pred cCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--------HHHHHhccCCCCC
Confidence 543321 223346778999999998899999999999999999999 999987433211 11111111 1111
Q ss_pred CChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 811 PSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 811 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
+... ...+.+++.+||+.||++|||++++++.|+
T Consensus 234 ~~~~----~~~l~~li~~~l~~dp~~Rps~~~~~~~l~ 267 (288)
T 3kfa_A 234 PEGC----PEKVYELMRACWQWNPSDRPSFAEIHQAFE 267 (288)
T ss_dssp CTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCC----CHHHHHHHHHHhCCChhhCcCHHHHHHHHH
Confidence 1111 234788999999999999999999999874
No 193
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=5.7e-35 Score=308.60 Aligned_cols=238 Identities=24% Similarity=0.374 Sum_probs=187.3
Q ss_pred cCCCcCceecCCccceEEEEEec-CCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeEEE
Q 042123 588 NDFDAKYCIGNGGHASVYRAELP-SGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSFLL 655 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~lV 655 (849)
++|+..+.||+|+||.||+|+.. +++.||||.+...... .......+.+|+. ++++++.+.+..++|
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLE-KEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccc-hHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 67889999999999999999654 6889999998642110 1111234455543 367788888999999
Q ss_pred EEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccCC
Q 042123 656 YEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLKP 735 (849)
Q Consensus 656 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~~ 735 (849)
|||+++|+|.+++... ..+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 93 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~ 166 (284)
T 2vgo_A 93 LEFAPRGELYKELQKH---GRFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPS 166 (284)
T ss_dssp ECCCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECSS
T ss_pred EEeCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCcc
Confidence 9999999999998654 3589999999999999999999998 999999999999999999999999999876543
Q ss_pred CCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCChhh
Q 042123 736 DSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPAPSRSA 815 (849)
Q Consensus 736 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 815 (849)
. ......|++.|+|||.+.+..++.++||||+|+++|+|++|+.||...... .....+.......+....
T Consensus 167 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------~~~~~~~~~~~~~~~~~~ 236 (284)
T 2vgo_A 167 L--RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT--------ETHRRIVNVDLKFPPFLS 236 (284)
T ss_dssp S--CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHHHHTTCCCCCTTSC
T ss_pred c--ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHh--------HHHHHHhccccCCCCcCC
Confidence 2 234467899999999999999999999999999999999999999743211 111222222222222222
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 816 QEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 816 ~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
..+.+++.+||+.||++|||+++++++
T Consensus 237 ----~~~~~li~~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 237 ----DGSKDLISKLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp ----HHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred ----HHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence 247789999999999999999999875
No 194
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=3.5e-35 Score=311.02 Aligned_cols=246 Identities=22% Similarity=0.431 Sum_probs=176.0
Q ss_pred hcCCCcCceecCCccceEEEEEecCCcEEEEEEecccCCCCchhhHHHHHHHHHH-----------hhceeecCCeeEEE
Q 042123 587 TNDFDAKYCIGNGGHASVYRAELPSGEVVAVKKFHSLLPCDQTVDQKEFLTEVEA-----------FYGFCSHARHSFLL 655 (849)
Q Consensus 587 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~~-----------~~~~~~~~~~~~lV 655 (849)
.++|+..+.||+|+||+||+|+.. ..||||++..... .....+.+.+|+.. +++++ .....++|
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv 97 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAP--TPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIV 97 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCC--CHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEE
Confidence 468999999999999999999874 3599999865432 23334566677653 44443 45668999
Q ss_pred EEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccCC
Q 042123 656 YEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLKP 735 (849)
Q Consensus 656 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~~ 735 (849)
|||+++++|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 98 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 172 (289)
T 3og7_A 98 TQWCEGSSLYHHLHASE--TKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSR 172 (289)
T ss_dssp EECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC-------
T ss_pred EEecCCCcHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceecccccc
Confidence 99999999999996543 4589999999999999999999999 999999999999999999999999999986543
Q ss_pred C--CCCeeeccCCcccccccccc---CCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCC
Q 042123 736 D--SSNWTEFAGTCGYIAPELAY---TMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPA 810 (849)
Q Consensus 736 ~--~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (849)
. ........||+.|+|||.+. +..++.++||||+|+++|||++|+.||........ ...........+....
T Consensus 173 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~~ 249 (289)
T 3og7_A 173 WSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ---IIEMVGRGSLSPDLSK 249 (289)
T ss_dssp -----------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHH---HHHHHHHTSCCCCTTS
T ss_pred ccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHH---HHHHhcccccCcchhh
Confidence 2 22234457899999999986 56788899999999999999999999974332110 0000000011111111
Q ss_pred CChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 811 PSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 811 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
........+.+++.+||+.||++|||++++++.|+
T Consensus 250 ---~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~ 284 (289)
T 3og7_A 250 ---VRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIE 284 (289)
T ss_dssp ---SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ---ccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHH
Confidence 11112234888999999999999999999999875
No 195
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=2e-35 Score=311.37 Aligned_cols=246 Identities=22% Similarity=0.360 Sum_probs=187.3
Q ss_pred hcCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHHHHH-----------hhcee--ecCCee
Q 042123 587 TNDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVEA-----------FYGFC--SHARHS 652 (849)
Q Consensus 587 ~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~~-----------~~~~~--~~~~~~ 652 (849)
.++|+..+.||+|+||.||+|+. .+++.||+|.+..... .....+.+.+|+.. +++++ ......
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 82 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM--TEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTL 82 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccC--CHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceE
Confidence 36788999999999999999965 4789999999875322 22334456666543 45554 345688
Q ss_pred EEEEEeccCCChhhhhccccc-ccCCCHHHHHHHHHHHHHHHHHHHhcCCCC-----eEecCCCCCCeeecCCCcEEEee
Q 042123 653 FLLYEFLERGSLAAILNTDAA-AQELGWSQRMNVIKAVAHALSYLHHDCFPP-----IVHRDISSKNLLLDLEYEAHVAD 726 (849)
Q Consensus 653 ~lV~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~-----ivH~dlk~~Nill~~~~~~kl~D 726 (849)
++||||+++|+|.+++..... ...+++.+++.++.|++.||+|||+. + |+||||||+||+++.++.+||+|
T Consensus 83 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~d 159 (279)
T 2w5a_A 83 YIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGD 159 (279)
T ss_dssp EEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECC
T ss_pred EEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEec
Confidence 999999999999999975432 23489999999999999999999998 7 99999999999999999999999
Q ss_pred ecCCcccCCCCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCC
Q 042123 727 FGIAKSLKPDSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDP 806 (849)
Q Consensus 727 fG~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 806 (849)
||.++.............|++.|+|||.+.+..++.++||||||+++|+|++|+.||...... .....+...
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--------~~~~~i~~~ 231 (279)
T 2w5a_A 160 FGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK--------ELAGKIREG 231 (279)
T ss_dssp CCHHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHT
T ss_pred CchheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHH--------HHHHHHhhc
Confidence 999987654333233457899999999999989999999999999999999999999744321 111111122
Q ss_pred CCCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 807 RLPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 807 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
..+.... .....+.+++.+||+.||++|||++||++++.
T Consensus 232 ~~~~~~~---~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~ 270 (279)
T 2w5a_A 232 KFRRIPY---RYSDELNEIITRMLNLKDYHRPSVEEILENPL 270 (279)
T ss_dssp CCCCCCT---TSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred ccccCCc---ccCHHHHHHHHHHcCCCcccCCCHHHHHhChh
Confidence 2111111 11234788999999999999999999999875
No 196
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=1.2e-34 Score=326.39 Aligned_cols=248 Identities=20% Similarity=0.292 Sum_probs=178.6
Q ss_pred hcCCCcCceecCCccceEEEEE-ecCCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecC-----
Q 042123 587 TNDFDAKYCIGNGGHASVYRAE-LPSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHA----- 649 (849)
Q Consensus 587 ~~~f~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~----- 649 (849)
.++|+..+.||+|+||.||+|. ..+++.||||++.... ......+.+.+|+. ++++++...
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~ 138 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF--QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEE 138 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGG--GSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTT
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccc--cChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCcccc
Confidence 4689999999999999999995 4578999999987542 12233445556654 355665433
Q ss_pred -CeeEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeec
Q 042123 650 -RHSFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFG 728 (849)
Q Consensus 650 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG 728 (849)
...|+||||++++ +.+.+.. .+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 139 ~~~~~lv~E~~~~~-l~~~~~~-----~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG 209 (464)
T 3ttj_A 139 FQDVYLVMELMDAN-LCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 209 (464)
T ss_dssp CCEEEEEEECCSEE-HHHHHTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCC
T ss_pred CCeEEEEEeCCCCC-HHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEE
Confidence 4679999999874 6565532 389999999999999999999999 99999999999999999999999999
Q ss_pred CCcccCCCCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccc--------------c
Q 042123 729 IAKSLKPDSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSS--------------L 794 (849)
Q Consensus 729 ~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~--------------~ 794 (849)
+++..... .......||+.|+|||++.+..|+.++||||+||++|||++|+.||...+...... .
T Consensus 210 ~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~ 288 (464)
T 3ttj_A 210 LARTAGTS-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMK 288 (464)
T ss_dssp CC-----C-CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHT
T ss_pred eeeecCCC-cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence 99876543 23455789999999999999999999999999999999999999997543111000 0
Q ss_pred ccccccccccCCC----------------CCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 795 NTDVALDQMLDPR----------------LPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 795 ~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
.........+... .+............+.+++.+||+.||++|||++|+++|
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 289 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp TSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000000011100 111111122234568899999999999999999999986
No 197
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=9.2e-35 Score=305.69 Aligned_cols=244 Identities=24% Similarity=0.330 Sum_probs=187.6
Q ss_pred HhcCCCcCceecCCccceEEEEEec-CCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeE
Q 042123 586 ATNDFDAKYCIGNGGHASVYRAELP-SGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSF 653 (849)
Q Consensus 586 ~~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~ 653 (849)
..++|+..+.||+|+||.||+|... +++.||||.+..... ......+.+|+. ++++++.+.+..+
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 81 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA---VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQY 81 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGC---TTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccc---hhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEE
Confidence 3468999999999999999999654 789999999864322 122344455543 3677888888999
Q ss_pred EEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCccc
Q 042123 654 LLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSL 733 (849)
Q Consensus 654 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~ 733 (849)
+||||+++++|.+++... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+...
T Consensus 82 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 155 (276)
T 2yex_A 82 LFLEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVF 155 (276)
T ss_dssp EEEECCTTEEGGGGSBTT---TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEecCCCcHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCcccc
Confidence 999999999999998653 3489999999999999999999999 9999999999999999999999999999865
Q ss_pred CCCC--CCeeeccCCccccccccccCCCC-CccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCC
Q 042123 734 KPDS--SNWTEFAGTCGYIAPELAYTMKI-TEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPA 810 (849)
Q Consensus 734 ~~~~--~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (849)
.... .......|++.|+|||.+.+..+ +.++||||+|+++|||++|+.||....... .....+.......
T Consensus 156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-------~~~~~~~~~~~~~ 228 (276)
T 2yex_A 156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-------QEYSDWKEKKTYL 228 (276)
T ss_dssp EETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTS-------HHHHHHHTTCTTS
T ss_pred CCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHH-------HHHHHhhhccccc
Confidence 4221 22344578999999999987765 778999999999999999999997433210 0111111111110
Q ss_pred CChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhh
Q 042123 811 PSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQL 847 (849)
Q Consensus 811 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L 847 (849)
. ........+.+++.+||+.||++|||++|++++-
T Consensus 229 ~--~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~ 263 (276)
T 2yex_A 229 N--PWKKIDSAPLALLHKILVENPSARITIPDIKKDR 263 (276)
T ss_dssp T--TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCT
T ss_pred C--chhhcCHHHHHHHHHHCCCCchhCCCHHHHhcCc
Confidence 0 1112233477899999999999999999998863
No 198
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=4.4e-34 Score=311.23 Aligned_cols=308 Identities=23% Similarity=0.319 Sum_probs=244.3
Q ss_pred cCCCCCCCCEEeCcCCccccCCCccccCCCCCCEeeCCCCcCcccccccccccCCCCCccccCeEeccCCcccccCCccC
Q 042123 25 SFSSFPHLAYLDLTWNGFFGTIPPQISNLSNLRYLYLGSNQFSGNILAEVSSESSGGNLRYMSRLVINDNSLSGFIPPHI 104 (849)
Q Consensus 25 ~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 104 (849)
.+..+++|++|++++|++..+. .+..+++|++|+|++|++++.. .+..+++|++|++++|.+++. +.|
T Consensus 39 ~~~~l~~L~~L~l~~~~i~~~~--~~~~~~~L~~L~l~~n~i~~~~--------~~~~l~~L~~L~L~~n~i~~~--~~~ 106 (347)
T 4fmz_A 39 TQEELESITKLVVAGEKVASIQ--GIEYLTNLEYLNLNGNQITDIS--------PLSNLVKLTNLYIGTNKITDI--SAL 106 (347)
T ss_dssp CHHHHTTCSEEECCSSCCCCCT--TGGGCTTCCEEECCSSCCCCCG--------GGTTCTTCCEEECCSSCCCCC--GGG
T ss_pred cchhcccccEEEEeCCccccch--hhhhcCCccEEEccCCccccch--------hhhcCCcCCEEEccCCcccCc--hHH
Confidence 3567899999999999997653 3999999999999999997421 167899999999999999864 479
Q ss_pred CCCCCCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEEcCCCcccccCCcCCCCCCCCCE
Q 042123 105 GNLKFLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLNDNQLIGYIPRPFSNLTSVST 184 (849)
Q Consensus 105 ~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 184 (849)
.++++|++|++++|++++..+ +..+++|++|++++|..... +..+..+++|++|++++|.+.++.+ +..+++|++
T Consensus 107 ~~l~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~-~~~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~ 181 (347)
T 4fmz_A 107 QNLTNLRELYLNEDNISDISP--LANLTKMYSLNLGANHNLSD-LSPLSNMTGLNYLTVTESKVKDVTP--IANLTDLYS 181 (347)
T ss_dssp TTCTTCSEEECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCC-CGGGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSE
T ss_pred cCCCcCCEEECcCCcccCchh--hccCCceeEEECCCCCCccc-ccchhhCCCCcEEEecCCCcCCchh--hccCCCCCE
Confidence 999999999999999996544 89999999999999966544 3459999999999999999988654 889999999
Q ss_pred EEccCCCCcCcCcccccCCCCCCEEeccCCcCccCCCcCccCccccchhhhccccccCCCCcchhhhhhhhhhccCcCCC
Q 042123 185 LRLSRNDLFGSIPDEIGKMRSLSVLDLNQNQFKGVLPPSISNLTNLKELALLYNHLSGSIPPSLGNLILRQLLLSGNHFT 264 (849)
Q Consensus 185 L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~L~~n~i~ 264 (849)
|++++|++.+. +. +..+++|+.|++++|.+.+..+ +..+++|++|++++|.+++ ++.
T Consensus 182 L~l~~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~-~~~------------------ 238 (347)
T 4fmz_A 182 LSLNYNQIEDI-SP-LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITD-LSP------------------ 238 (347)
T ss_dssp EECTTSCCCCC-GG-GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-CGG------------------
T ss_pred EEccCCccccc-cc-ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCC-Ccc------------------
Confidence 99999999844 43 8899999999999999986544 8889999999999998873 222
Q ss_pred CCCCcccCCCCCcceeeecccccccccCCCCCCcccccEEEccCccccCchhhhhCCCCCCCEEeccCccccCcccccCC
Q 042123 265 GYLPYNICRGGALEIFTVSENHFQGTIPTSLRNCTSLIRVRLNGNNLTGNISEALGIYPNLTFIDLSRNNFYGEISSNWG 344 (849)
Q Consensus 265 ~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 344 (849)
+..+++|+.|++++|.+++. ..+..+++|+.|++++|++++. ..+..+++|+.|++++|++.+..+..+.
T Consensus 239 ------~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~ 308 (347)
T 4fmz_A 239 ------LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIG 308 (347)
T ss_dssp ------GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHH
T ss_pred ------hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhh
Confidence 34455666677777666643 3466677777777777777754 3466777777777777777777777777
Q ss_pred CCCCCcEEeccCCccccCCCCCcccccccccccccccccc
Q 042123 345 KFPKLGTLNVSMNNITGGLPREIGNSSQLQAFDLSLNHIV 384 (849)
Q Consensus 345 ~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~N~i~ 384 (849)
.+++|++|++++|.+++..| +..+++|+.|++++|.|+
T Consensus 309 ~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 309 GLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp TCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred ccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 77777777777777775544 677777778888777764
No 199
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=1.1e-34 Score=308.28 Aligned_cols=243 Identities=22% Similarity=0.313 Sum_probs=182.7
Q ss_pred cCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeEEE
Q 042123 588 NDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSFLL 655 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~lV 655 (849)
++|.....||+|+||.||+|.. .+++.||||.+..... .....+.+|+. .+++++...+..++|
T Consensus 22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 97 (295)
T 2clq_A 22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDS----RYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIF 97 (295)
T ss_dssp CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC-------HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCch----HHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEE
Confidence 3455666999999999999965 5788999999865421 22334445543 367788888899999
Q ss_pred EEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecC-CCcEEEeeecCCcccC
Q 042123 656 YEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDL-EYEAHVADFGIAKSLK 734 (849)
Q Consensus 656 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~-~~~~kl~DfG~a~~~~ 734 (849)
|||+++++|.+++........+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||.+....
T Consensus 98 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~ 174 (295)
T 2clq_A 98 MEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA 174 (295)
T ss_dssp EECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESC
T ss_pred EEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccC
Confidence 99999999999997654444577899999999999999999999 9999999999999987 8999999999998765
Q ss_pred CCCCCeeeccCCccccccccccCCC--CCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCC
Q 042123 735 PDSSNWTEFAGTCGYIAPELAYTMK--ITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPAPS 812 (849)
Q Consensus 735 ~~~~~~~~~~g~~~y~aPE~~~~~~--~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (849)
..........|++.|+|||.+.+.. ++.++||||||+++|+|++|+.||......... ..........+.++ .
T Consensus 175 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~---~~~~~~~~~~~~~~--~ 249 (295)
T 2clq_A 175 GINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAA---MFKVGMFKVHPEIP--E 249 (295)
T ss_dssp C-----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHH---HHHHHHHCCCCCCC--T
T ss_pred CCCCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHH---HHhhcccccccccc--c
Confidence 4433344567899999999987643 789999999999999999999999643211100 00000001111221 1
Q ss_pred hhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 813 RSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 813 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
.. ...+.+++.+||+.||++|||+++++++
T Consensus 250 ~~----~~~~~~li~~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 250 SM----SAEAKAFILKCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp TS----CHHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred cC----CHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 11 2347788999999999999999999875
No 200
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=2.5e-35 Score=316.60 Aligned_cols=252 Identities=22% Similarity=0.396 Sum_probs=190.2
Q ss_pred HHHHHHHhcCCCcCceecCCccceEEEEEe------cCCcEEEEEEecccCCCCchhhHHHHHHHHHH------------
Q 042123 580 YDEIVKATNDFDAKYCIGNGGHASVYRAEL------PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVEA------------ 641 (849)
Q Consensus 580 ~~~~~~~~~~f~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~~------------ 641 (849)
..++....++|+..+.||+|+||.||+|+. .+++.||||.+.... .....+.+.+|+..
T Consensus 19 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~hp~iv~ 95 (316)
T 2xir_A 19 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA---THSEHRALMSELKILIHIGHHLNVVN 95 (316)
T ss_dssp HHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred ccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCC---CcHHHHHHHHHHHHHHhcccCCCeee
Confidence 344444567899999999999999999963 356889999987542 22233445555442
Q ss_pred hhceeecC-CeeEEEEEeccCCChhhhhccccc-------------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEec
Q 042123 642 FYGFCSHA-RHSFLLYEFLERGSLAAILNTDAA-------------AQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHR 707 (849)
Q Consensus 642 ~~~~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~ 707 (849)
+++++... ...++||||+++|+|.+++..... ...+++.++..++.|++.||+|||+. +|+||
T Consensus 96 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~ 172 (316)
T 2xir_A 96 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHR 172 (316)
T ss_dssp EEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCS
T ss_pred EEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---Ccccc
Confidence 45555544 458999999999999999975432 12278999999999999999999999 99999
Q ss_pred CCCCCCeeecCCCcEEEeeecCCcccCCCCCC--eeeccCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCC
Q 042123 708 DISSKNLLLDLEYEAHVADFGIAKSLKPDSSN--WTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIK-GKHPRD 784 (849)
Q Consensus 708 dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~t-g~~Pf~ 784 (849)
||||+||+++.++.+||+|||+++........ .....+|+.|+|||.+.+..++.++||||||+++|||++ |+.||.
T Consensus 173 dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~ 252 (316)
T 2xir_A 173 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 252 (316)
T ss_dssp CCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred cCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCc
Confidence 99999999999999999999999876544332 223457889999999999999999999999999999998 999987
Q ss_pred ccccccccccccccccccccCC-CCCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 785 FLSSISSSSLNTDVALDQMLDP-RLPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 785 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
...... .....+... ....+... ...+.+++.+||+.||++|||++|++++|+
T Consensus 253 ~~~~~~-------~~~~~~~~~~~~~~~~~~----~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 306 (316)
T 2xir_A 253 GVKIDE-------EFCRRLKEGTRMRAPDYT----TPEMYQTMLDCWHGEPSQRPTFSELVEHLG 306 (316)
T ss_dssp TCCCSH-------HHHHHHHHTCCCCCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ccchhH-------HHHHHhccCccCCCCCCC----CHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 432110 111111111 11111111 224788999999999999999999999885
No 201
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-34 Score=306.61 Aligned_cols=240 Identities=25% Similarity=0.408 Sum_probs=185.0
Q ss_pred cCCCcCc-eecCCccceEEEEEec---CCcEEEEEEecccCCCCchhhHHHHHHHHHH-----------hhceeecCCee
Q 042123 588 NDFDAKY-CIGNGGHASVYRAELP---SGEVVAVKKFHSLLPCDQTVDQKEFLTEVEA-----------FYGFCSHARHS 652 (849)
Q Consensus 588 ~~f~~~~-~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~ei~~-----------~~~~~~~~~~~ 652 (849)
++|.+.. .||+|+||.||+|... ++..||||.+.... .....+.+.+|+.. +++++ ..+..
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~ 84 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT---EKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEAL 84 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCcc---chhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCc
Confidence 4555555 8999999999999653 57889999987642 22334556666543 56666 45678
Q ss_pred EEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcc
Q 042123 653 FLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKS 732 (849)
Q Consensus 653 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~ 732 (849)
++||||+++|+|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 85 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~ 159 (287)
T 1u59_A 85 MLVMEMAGGGPLHKFLVGKR--EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKA 159 (287)
T ss_dssp EEEEECCTTEEHHHHHTTCT--TTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred EEEEEeCCCCCHHHHHHhCC--ccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceee
Confidence 99999999999999996433 4589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCC---eeeccCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCC-
Q 042123 733 LKPDSSN---WTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIK-GKHPRDFLSSISSSSLNTDVALDQMLDPR- 807 (849)
Q Consensus 733 ~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~- 807 (849)
....... .....+|+.|+|||.+.+..++.++||||||+++|||++ |+.||...... .....+....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--------~~~~~i~~~~~ 231 (287)
T 1u59_A 160 LGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--------EVMAFIEQGKR 231 (287)
T ss_dssp CTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH--------HHHHHHHTTCC
T ss_pred eccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH--------HHHHHHhcCCc
Confidence 7543321 122346789999999988889999999999999999998 99999743321 1111111111
Q ss_pred CCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 808 LPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 808 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
...+... ...+.+++.+||+.||++|||+.+++++|+
T Consensus 232 ~~~~~~~----~~~l~~li~~~l~~~p~~Rps~~~l~~~l~ 268 (287)
T 1u59_A 232 MECPPEC----PPELYALMSDCWIYKWEDRPDFLTVEQRMR 268 (287)
T ss_dssp CCCCTTC----CHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCCCc----CHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 1111112 234888999999999999999999999875
No 202
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=1.9e-34 Score=322.09 Aligned_cols=191 Identities=19% Similarity=0.261 Sum_probs=154.5
Q ss_pred cCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCC-chhhHHHHHHHH-----------HHhhceeecCCeeEE
Q 042123 588 NDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCD-QTVDQKEFLTEV-----------EAFYGFCSHARHSFL 654 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-~~~~~~~~~~ei-----------~~~~~~~~~~~~~~l 654 (849)
.+|++.+.||+|+||.||+|.. .+++.||||++....... ....+..+++++ ..+++++......++
T Consensus 97 ~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~l 176 (429)
T 3kvw_A 97 YRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICM 176 (429)
T ss_dssp TTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEE
T ss_pred CcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEE
Confidence 5799999999999999999954 568999999986531100 001111222222 135667777889999
Q ss_pred EEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCc--EEEeeecCCcc
Q 042123 655 LYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYE--AHVADFGIAKS 732 (849)
Q Consensus 655 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~--~kl~DfG~a~~ 732 (849)
||||++ ++|.+++.... ...+++.++..++.||+.||+|||+. +|+||||||+|||++.++. +||+|||++..
T Consensus 177 v~e~~~-~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~ 251 (429)
T 3kvw_A 177 TFELLS-MNLYELIKKNK-FQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGSSCY 251 (429)
T ss_dssp EECCCC-CBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCCTTCEE
T ss_pred EEeccC-CCHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeeccccee
Confidence 999996 59999886543 23489999999999999999999999 9999999999999999987 99999999976
Q ss_pred cCCCCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCcc
Q 042123 733 LKPDSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFL 786 (849)
Q Consensus 733 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~ 786 (849)
.... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 252 ~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 252 EHQR---VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp TTCC---CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cCCc---ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 5432 23467899999999999999999999999999999999999999754
No 203
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=6.3e-35 Score=311.53 Aligned_cols=240 Identities=20% Similarity=0.296 Sum_probs=185.3
Q ss_pred hcCCCcCceecCCccceEEEEEec-CCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeEE
Q 042123 587 TNDFDAKYCIGNGGHASVYRAELP-SGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSFL 654 (849)
Q Consensus 587 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~l 654 (849)
.++|...+.||+|+||.||+|+.. +|+.||||.+...... ....+.+|+. .+++++......++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAF----RDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYL 83 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC----------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEeccccc----chHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEE
Confidence 467899999999999999999654 7999999998753211 1223444433 36778888899999
Q ss_pred EEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeee---cCCCcEEEeeecCCc
Q 042123 655 LYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLL---DLEYEAHVADFGIAK 731 (849)
Q Consensus 655 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~DfG~a~ 731 (849)
||||+++|+|.+++... ..+++.++..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||++.
T Consensus 84 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~ 157 (304)
T 2jam_A 84 VMQLVSGGELFDRILER---GVYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSK 157 (304)
T ss_dssp EECCCCSCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTC
T ss_pred EEEcCCCccHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcce
Confidence 99999999999998643 3589999999999999999999999 99999999999999 778999999999997
Q ss_pred ccCCCCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCC
Q 042123 732 SLKPDSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPAP 811 (849)
Q Consensus 732 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (849)
..... ......|++.|+|||.+.+..++.++||||+|+++|+|++|+.||...... .....+.......+
T Consensus 158 ~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------~~~~~i~~~~~~~~ 227 (304)
T 2jam_A 158 MEQNG--IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETES--------KLFEKIKEGYYEFE 227 (304)
T ss_dssp CCCCB--TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHH--------HHHHHHHHCCCCCC
T ss_pred ecCCC--ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH--------HHHHHHHcCCCCCC
Confidence 65432 234456899999999999999999999999999999999999999743211 11111111111111
Q ss_pred ChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 812 SRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 812 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
..........+.+++.+||+.||++|||++|++++
T Consensus 228 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 228 SPFWDDISESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp TTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred ccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 11111222347889999999999999999999875
No 204
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=8.6e-35 Score=306.41 Aligned_cols=240 Identities=23% Similarity=0.408 Sum_probs=185.8
Q ss_pred hcCCCcCceecCCccceEEEEEecCCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeEEE
Q 042123 587 TNDFDAKYCIGNGGHASVYRAELPSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSFLL 655 (849)
Q Consensus 587 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~lV 655 (849)
.++|+..+.||+|+||.||+|...++..||||.+..... ....+.+|+. ++++++. .+..++|
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-----~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v 85 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-----SPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYII 85 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSS-----CHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEE
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcc-----cHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEE
Confidence 367888999999999999999988888999999865321 1334555544 2556654 4568899
Q ss_pred EEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccCC
Q 042123 656 YEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLKP 735 (849)
Q Consensus 656 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~~ 735 (849)
|||+++|+|.+++.... ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+.....
T Consensus 86 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 161 (279)
T 1qpc_A 86 TEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIED 161 (279)
T ss_dssp EECCTTCBHHHHTTSHH-HHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred EecCCCCCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccC
Confidence 99999999999997543 23589999999999999999999999 999999999999999999999999999987654
Q ss_pred CCC-CeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCC-CCCCCC
Q 042123 736 DSS-NWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIK-GKHPRDFLSSISSSSLNTDVALDQMLDP-RLPAPS 812 (849)
Q Consensus 736 ~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 812 (849)
... ......++..|+|||.+.+..++.++||||||+++|||++ |+.||...... .....+... ....+.
T Consensus 162 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~~ 233 (279)
T 1qpc_A 162 NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP--------EVIQNLERGYRMVRPD 233 (279)
T ss_dssp SCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--------HHHHHHHTTCCCCCCT
T ss_pred cccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH--------HHHHHHhcccCCCCcc
Confidence 321 1122346778999999988889999999999999999999 99998743221 111111111 111111
Q ss_pred hhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 813 RSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 813 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
.. ...+.+++.+||+.||++|||++++++.|+
T Consensus 234 ~~----~~~l~~li~~~l~~~p~~Rps~~~l~~~l~ 265 (279)
T 1qpc_A 234 NC----PEELYQLMRLCWKERPEDRPTFDYLRSVLE 265 (279)
T ss_dssp TC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred cc----cHHHHHHHHHHhccChhhCCCHHHHHHHHH
Confidence 11 234788999999999999999999998874
No 205
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=5e-35 Score=315.71 Aligned_cols=248 Identities=25% Similarity=0.378 Sum_probs=187.9
Q ss_pred cCCCcCceecCCccceEEEEEe-----cCCcEEEEEEecccCCCCchhhHHHHHHHHHH-----------hhceee--cC
Q 042123 588 NDFDAKYCIGNGGHASVYRAEL-----PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVEA-----------FYGFCS--HA 649 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~~-----------~~~~~~--~~ 649 (849)
++|+..+.||+|+||.||+|++ .+++.||||++... .....+.+.+|+.. +++++. ..
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 98 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS----GPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGR 98 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSC----CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSS
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccC----CHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCC
Confidence 5788899999999999999973 46889999998753 22334456666553 445543 45
Q ss_pred CeeEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecC
Q 042123 650 RHSFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGI 729 (849)
Q Consensus 650 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~ 729 (849)
...++||||+++|+|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 99 ~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 173 (327)
T 3lxl_A 99 QSLRLVMEYLPSGCLRDFLQRHR--ARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGL 173 (327)
T ss_dssp CEEEEEEECCTTCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGG
T ss_pred ceEEEEEeecCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEccccc
Confidence 67899999999999999997543 3489999999999999999999999 999999999999999999999999999
Q ss_pred CcccCCCCCC---eeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCcccccccc------cc-ccccc
Q 042123 730 AKSLKPDSSN---WTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSS------SL-NTDVA 799 (849)
Q Consensus 730 a~~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~------~~-~~~~~ 799 (849)
++........ .....+++.|+|||.+.+..++.++||||||+++|+|++|+.||......... .. .....
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 253 (327)
T 3lxl_A 174 AKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRL 253 (327)
T ss_dssp CEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHH
T ss_pred ceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHH
Confidence 9876544321 22345788899999999988999999999999999999999998643221000 00 00011
Q ss_pred cccccCCC-CCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 800 LDQMLDPR-LPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 800 ~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
........ .+.+.. ....+.+++.+||+.||++|||++|++++|+
T Consensus 254 ~~~~~~~~~~~~~~~----~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 299 (327)
T 3lxl_A 254 LELLEEGQRLPAPPA----CPAEVHELMKLCWAPSPQDRPSFSALGPQLD 299 (327)
T ss_dssp HHHHHTTCCCCCCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHhhcccCCCCCCc----ccHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 11111111 111111 2234788999999999999999999999885
No 206
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=3.2e-35 Score=317.80 Aligned_cols=251 Identities=21% Similarity=0.350 Sum_probs=182.7
Q ss_pred cCCCcCceecCCccceEEEEEec-CCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeEEE
Q 042123 588 NDFDAKYCIGNGGHASVYRAELP-SGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSFLL 655 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~lV 655 (849)
++|+..+.||+|+||.||+|+.. +++.||||++.... ......+.+.+|+. .+++++...+..++|
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 102 (331)
T 4aaa_A 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESD--DDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLV 102 (331)
T ss_dssp GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCS--SCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCC--CchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEE
Confidence 67889999999999999999664 68999999986542 22223344555544 367888888999999
Q ss_pred EEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccCC
Q 042123 656 YEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLKP 735 (849)
Q Consensus 656 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~~ 735 (849)
|||+++++|.++.... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 103 ~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 176 (331)
T 4aaa_A 103 FEFVDHTILDDLELFP---NGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAA 176 (331)
T ss_dssp EECCSEEHHHHHHHST---TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred EecCCcchHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeecC
Confidence 9999999998886543 3489999999999999999999999 999999999999999999999999999987665
Q ss_pred CCCCeeeccCCccccccccccCC-CCCccchHHHHHHHHHHHHhCCCCCCcccccccccc----------------cccc
Q 042123 736 DSSNWTEFAGTCGYIAPELAYTM-KITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSL----------------NTDV 798 (849)
Q Consensus 736 ~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~----------------~~~~ 798 (849)
.........+++.|+|||.+.+. .++.++||||+|+++|+|++|+.||........... ....
T Consensus 177 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (331)
T 4aaa_A 177 PGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNP 256 (331)
T ss_dssp -------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCG
T ss_pred CccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhcc
Confidence 44445566799999999998775 689999999999999999999999975432110000 0000
Q ss_pred ccccccCCCCCCCCh---hhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 799 ALDQMLDPRLPAPSR---SAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 799 ~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
.......+....... ........+.+++.+||+.||++|||++|++++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 257 VFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp GGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 000000111111000 001123458899999999999999999999876
No 207
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=2.7e-35 Score=324.13 Aligned_cols=235 Identities=14% Similarity=0.141 Sum_probs=175.2
Q ss_pred hcCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHHH--------------HHhh-------c
Q 042123 587 TNDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTEV--------------EAFY-------G 644 (849)
Q Consensus 587 ~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~ei--------------~~~~-------~ 644 (849)
.++|+..+.||+|+||.||+|+. .+|+.||||++...... .....+.+.+|+ .+++ +
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~ 150 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERP-PSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD 150 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-C-CTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeecccc-chHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhh
Confidence 36788899999999999999975 56999999998743221 122234455554 2344 3
Q ss_pred eeecCC-----------------eeEEEEEeccCCChhhhhccccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCC
Q 042123 645 FCSHAR-----------------HSFLLYEFLERGSLAAILNTDAA----AQELGWSQRMNVIKAVAHALSYLHHDCFPP 703 (849)
Q Consensus 645 ~~~~~~-----------------~~~lV~e~~~~gsL~~~l~~~~~----~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ 703 (849)
++...+ ..++||||+ +|+|.+++..... ...+++..+..++.||+.||+|||+. +
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ 226 (377)
T 3byv_A 151 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---G 226 (377)
T ss_dssp EEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred hhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---C
Confidence 433332 378999999 6799999975431 11244588889999999999999999 9
Q ss_pred eEecCCCCCCeeecCCCcEEEeeecCCcccCCCCCCeeeccCCccccccccccCC-----------CCCccchHHHHHHH
Q 042123 704 IVHRDISSKNLLLDLEYEAHVADFGIAKSLKPDSSNWTEFAGTCGYIAPELAYTM-----------KITEKCDVYSFGVL 772 (849)
Q Consensus 704 ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~-----------~~~~~~Dv~SlGvi 772 (849)
|+||||||+|||++.++.+||+|||+++... .......| +.|+|||++.+. .++.++|||||||+
T Consensus 227 ivHrDikp~NIll~~~~~~kL~DFG~a~~~~---~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~i 302 (377)
T 3byv_A 227 LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDG---ARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLV 302 (377)
T ss_dssp EECSCCCGGGEEECTTCCEEECCGGGCEETT---CEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHH
T ss_pred eecCCCCHHHEEEcCCCCEEEEechhheecC---CcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHH
Confidence 9999999999999999999999999998643 23345567 999999999887 89999999999999
Q ss_pred HHHHHhCCCCCCccccccccccccccccccccCCCCCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 773 MWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 773 l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
+|||++|+.||....... ....... ... .. ...+.+++.+||+.||++|||+.|++++
T Consensus 303 l~elltg~~Pf~~~~~~~--------~~~~~~~-~~~---~~----~~~~~~li~~~L~~dp~~Rpt~~e~l~h 360 (377)
T 3byv_A 303 IYWIWCADLPITKDAALG--------GSEWIFR-SCK---NI----PQPVRALLEGFLRYPKEDRLLPLQAMET 360 (377)
T ss_dssp HHHHHHSSCCC------C--------CSGGGGS-SCC---CC----CHHHHHHHHHHTCSSGGGCCCHHHHHTS
T ss_pred HHHHHHCCCCCccccccc--------chhhhhh-hcc---CC----CHHHHHHHHHHcCCCchhCCCHHHHhhC
Confidence 999999999997433211 1111111 111 11 1247889999999999999999999875
No 208
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=1.3e-34 Score=305.40 Aligned_cols=241 Identities=22% Similarity=0.374 Sum_probs=182.0
Q ss_pred hcCCCcCceecCCccceEEEEEecC----CcEEEEEEecccCCCCchhhHHHHHHHHHH-----------hhceeecCCe
Q 042123 587 TNDFDAKYCIGNGGHASVYRAELPS----GEVVAVKKFHSLLPCDQTVDQKEFLTEVEA-----------FYGFCSHARH 651 (849)
Q Consensus 587 ~~~f~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~ei~~-----------~~~~~~~~~~ 651 (849)
.++|...+.||+|+||.||+|.... +..||||.+.... .....+.+.+|+.. +++++.+ +.
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~ 86 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC---TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EP 86 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS---CHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SS
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc---CchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CC
Confidence 3678899999999999999996532 3469999987542 22234455666542 5566544 45
Q ss_pred eEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCc
Q 042123 652 SFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAK 731 (849)
Q Consensus 652 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~ 731 (849)
.++||||+++++|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 87 ~~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 161 (281)
T 3cc6_A 87 TWIIMELYPYGELGHYLERNK--NSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSR 161 (281)
T ss_dssp CEEEEECCTTCBHHHHHHHHT--TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGG
T ss_pred CEEEEecCCCCCHHHHHHhcc--ccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCc
Confidence 689999999999999996533 4589999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCC-CeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccC-CCC
Q 042123 732 SLKPDSS-NWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIK-GKHPRDFLSSISSSSLNTDVALDQMLD-PRL 808 (849)
Q Consensus 732 ~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~-~~~ 808 (849)
....... ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||....... ....+.. ...
T Consensus 162 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~--------~~~~~~~~~~~ 233 (281)
T 3cc6_A 162 YIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD--------VIGVLEKGDRL 233 (281)
T ss_dssp CC---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG--------HHHHHHHTCCC
T ss_pred ccccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH--------HHHHHhcCCCC
Confidence 7654322 2233456789999999998899999999999999999998 999996432211 1111111 111
Q ss_pred CCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 809 PAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 809 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
+.+... ...+.+++.+||+.||++|||+.|++++|+
T Consensus 234 ~~~~~~----~~~l~~li~~~l~~~p~~Rps~~ell~~L~ 269 (281)
T 3cc6_A 234 PKPDLC----PPVLYTLMTRCWDYDPSDRPRFTELVCSLS 269 (281)
T ss_dssp CCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCCC----CHHHHHHHHHHccCCchhCcCHHHHHHHHH
Confidence 111111 234788999999999999999999999875
No 209
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.8e-35 Score=322.47 Aligned_cols=250 Identities=17% Similarity=0.249 Sum_probs=182.5
Q ss_pred cCCCcCceecCCccceEEEEEec---------CCcEEEEEEecccCCCCchhhHHHHHHH-----HHH------------
Q 042123 588 NDFDAKYCIGNGGHASVYRAELP---------SGEVVAVKKFHSLLPCDQTVDQKEFLTE-----VEA------------ 641 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~~---------~~~~vavK~~~~~~~~~~~~~~~~~~~e-----i~~------------ 641 (849)
++|+..+.||+|+||.||+|+.. +++.||||.+... .....+..+++. +..
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 118 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD---GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLA 118 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT---STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCS
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc---chHHHHHHHHHHhcccchhhhhhhhccCCccC
Confidence 67899999999999999999765 3789999998754 112222223322 222
Q ss_pred ---hhceeec-CCeeEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeec
Q 042123 642 ---FYGFCSH-ARHSFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLD 717 (849)
Q Consensus 642 ---~~~~~~~-~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~ 717 (849)
+++++.. ....++||||+ +|+|.+++.... ...+++.++..++.||+.||+|||+. +|+||||||+||+++
T Consensus 119 i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIl~~ 193 (352)
T 2jii_A 119 IPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP-KHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAENIFVD 193 (352)
T ss_dssp CCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGGGEEEE
T ss_pred ccchhhccccCCcEEEEEecCC-CcCHHHHHHhCC-cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEEc
Confidence 3455554 67889999999 999999997542 34699999999999999999999999 999999999999999
Q ss_pred CCC--cEEEeeecCCcccCCCCC-------CeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCcccc
Q 042123 718 LEY--EAHVADFGIAKSLKPDSS-------NWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSS 788 (849)
Q Consensus 718 ~~~--~~kl~DfG~a~~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~ 788 (849)
.++ .+||+|||+++.+..... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||.....
T Consensus 194 ~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~ 273 (352)
T 2jii_A 194 PEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLP 273 (352)
T ss_dssp TTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTT
T ss_pred CCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCc
Confidence 998 899999999986643221 12345789999999999999999999999999999999999999975431
Q ss_pred ccccccccccccccccC--CCCCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 789 ISSSSLNTDVALDQMLD--PRLPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 789 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
.... .......... ..+.............+.+++.+||+.||++|||+++|++.|+
T Consensus 274 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~ 332 (352)
T 2jii_A 274 NTED---IMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLE 332 (352)
T ss_dssp CHHH---HHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHH
T ss_pred CHHH---HHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHH
Confidence 1100 0000000000 0000000000011234888999999999999999999998874
No 210
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=1.7e-33 Score=304.25 Aligned_cols=288 Identities=20% Similarity=0.254 Sum_probs=186.1
Q ss_pred ccCeEeccCCcccccCCccCCCCCCCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEEcC
Q 042123 85 YMSRLVINDNSLSGFIPPHIGNLKFLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLN 164 (849)
Q Consensus 85 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 164 (849)
+++.+++++|.++ .+|..+. ++|++|+|++|+|+++.|.+|.++++|++|+|++|++++..+..|.++++|++|+|+
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred cCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 3444455555444 3344432 567777777777776666677777777777777777776666777777777777777
Q ss_pred CCcccccCCcCCCCCCCCCEEEccCCCCcCcCcccccCCCCCCEEeccCCcCc--cCCCcCccCccccchhhhccccccC
Q 042123 165 DNQLIGYIPRPFSNLTSVSTLRLSRNDLFGSIPDEIGKMRSLSVLDLNQNQFK--GVLPPSISNLTNLKELALLYNHLSG 242 (849)
Q Consensus 165 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~--~~~~~~~~~l~~L~~L~L~~N~l~~ 242 (849)
+|++..+++..+ ++|++|++++|+++...+..|.++++|++|++++|.++ +..+..+..+ +|++|++++|.++
T Consensus 111 ~n~l~~l~~~~~---~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~- 185 (332)
T 2ft3_A 111 KNHLVEIPPNLP---SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLT- 185 (332)
T ss_dssp SSCCCSCCSSCC---TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCS-
T ss_pred CCcCCccCcccc---ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCC-
Confidence 777776544433 67777777777777655566777777777777777775 2556666666 7777777777776
Q ss_pred CCCcchhhhhhhhhhccCcCCCCCCCcccCCCCCcceeeecccccccccCCCCCCcccccEEEccCccccCchhhhhCCC
Q 042123 243 SIPPSLGNLILRQLLLSGNHFTGYLPYNICRGGALEIFTVSENHFQGTIPTSLRNCTSLIRVRLNGNNLTGNISEALGIY 322 (849)
Q Consensus 243 ~~p~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 322 (849)
.+|..+. ++|+.|++++|.+++..+..|..+++|+.|++++|++++..+..+..+
T Consensus 186 ~l~~~~~-------------------------~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l 240 (332)
T 2ft3_A 186 GIPKDLP-------------------------ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFL 240 (332)
T ss_dssp SCCSSSC-------------------------SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGC
T ss_pred ccCcccc-------------------------CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCC
Confidence 2333221 345555555555555555566666666666666666666666666666
Q ss_pred CCCCEEeccCccccCcccccCCCCCCCcEEeccCCccccCCCCCcccc------cccccccccccccc--ccCchhhcCC
Q 042123 323 PNLTFIDLSRNNFYGEISSNWGKFPKLGTLNVSMNNITGGLPREIGNS------SQLQAFDLSLNHIV--GEIPKELGKL 394 (849)
Q Consensus 323 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l------~~L~~L~L~~N~i~--~~~~~~~~~l 394 (849)
++|+.|+|++|++. .+|..+..+++|++|++++|.+++..+..|... .+|+.|++++|.+. +..|..|..+
T Consensus 241 ~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l 319 (332)
T 2ft3_A 241 PTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCV 319 (332)
T ss_dssp TTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTB
T ss_pred CCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCccccccc
Confidence 66666666666666 455556666677777777777765555555442 55777788888776 5667778888
Q ss_pred CCCcEEEccCcc
Q 042123 395 NPLTKLILRGNQ 406 (849)
Q Consensus 395 ~~L~~L~L~~N~ 406 (849)
++|+.|++++|+
T Consensus 320 ~~L~~l~l~~n~ 331 (332)
T 2ft3_A 320 TDRLAIQFGNYK 331 (332)
T ss_dssp CCSTTEEC----
T ss_pred chhhhhhccccc
Confidence 888888888774
No 211
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=9.4e-35 Score=313.07 Aligned_cols=240 Identities=25% Similarity=0.454 Sum_probs=177.3
Q ss_pred cCCCcCceecCCccceEEEEEe-cCCcE----EEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCe
Q 042123 588 NDFDAKYCIGNGGHASVYRAEL-PSGEV----VAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARH 651 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~----vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~ 651 (849)
++|+..+.||+|+||.||+|.+ .+++. ||+|.+.... .....+.+.+|+. .+++++... .
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-~ 90 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMASVDNPHVCRLLGICLTS-T 90 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCS---SCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESS-S
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeecccc---CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecC-C
Confidence 6799999999999999999965 34554 5777765432 2223455666654 356666554 4
Q ss_pred eEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCc
Q 042123 652 SFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAK 731 (849)
Q Consensus 652 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~ 731 (849)
.++|+||+++|+|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 91 ~~~v~~~~~~g~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~ 165 (327)
T 3lzb_A 91 VQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 165 (327)
T ss_dssp EEEEECCCSSCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC--
T ss_pred ceEEEEecCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCccee
Confidence 789999999999999996543 3589999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCC--CeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCC-C
Q 042123 732 SLKPDSS--NWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIK-GKHPRDFLSSISSSSLNTDVALDQMLDP-R 807 (849)
Q Consensus 732 ~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~-~ 807 (849)
....... ......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||....... ....+... .
T Consensus 166 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~--------~~~~~~~~~~ 237 (327)
T 3lzb_A 166 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--------ISSILEKGER 237 (327)
T ss_dssp --------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--------HHHHHHTTCC
T ss_pred EccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH--------HHHHHHcCCC
Confidence 7644322 2233456778999999999999999999999999999999 999997433211 11111111 1
Q ss_pred CCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 808 LPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 808 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
.+.+.... ..+.+++.+||+.||++|||+.|+++.|+
T Consensus 238 ~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~ell~~L~ 274 (327)
T 3lzb_A 238 LPQPPICT----IDVYMIMRKCWMIDADSRPKFRELIIEFS 274 (327)
T ss_dssp CCCCTTBC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCccCC----HHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 22222222 24788999999999999999999999874
No 212
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=8.8e-35 Score=331.09 Aligned_cols=242 Identities=21% Similarity=0.337 Sum_probs=187.9
Q ss_pred hcCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeEE
Q 042123 587 TNDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSFL 654 (849)
Q Consensus 587 ~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~l 654 (849)
.++|++.+.||+|+||+||+|.. .+++.||||++...... ......+.+|+. ++++++......++
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 98 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK--NKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI 98 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHB--CSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEeccccc--chHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEE
Confidence 46799999999999999999965 47999999998643211 112344555544 36788888899999
Q ss_pred EEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeec---CCCcEEEeeecCCc
Q 042123 655 LYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLD---LEYEAHVADFGIAK 731 (849)
Q Consensus 655 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~---~~~~~kl~DfG~a~ 731 (849)
||||+++|+|.+.+... ..+++.++..++.||+.||+|||+. +|+||||||+||+++ .++.+||+|||+++
T Consensus 99 v~e~~~~~~L~~~~~~~---~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 172 (486)
T 3mwu_A 99 VGELYTGGELFDEIIKR---KRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLST 172 (486)
T ss_dssp EECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTT
T ss_pred EEEcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCe
Confidence 99999999999988653 3589999999999999999999999 999999999999995 45679999999998
Q ss_pred ccCCCCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCC
Q 042123 732 SLKPDSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPAP 811 (849)
Q Consensus 732 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (849)
..... .......||+.|+|||++.+ .++.++||||+||++|+|++|+.||..... ......+........
T Consensus 173 ~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~--------~~~~~~i~~~~~~~~ 242 (486)
T 3mwu_A 173 CFQQN-TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE--------YDILKRVETGKYAFD 242 (486)
T ss_dssp TBCCC-----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHTCCCSC
T ss_pred ECCCC-CccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhCCCCCC
Confidence 76543 23345679999999999876 599999999999999999999999974321 112222222222222
Q ss_pred ChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 812 SRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 812 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
...+......+.+++.+||+.||++|||+.|+++|
T Consensus 243 ~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 243 LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp SGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred CcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 22222334458899999999999999999999986
No 213
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=3e-35 Score=311.65 Aligned_cols=234 Identities=23% Similarity=0.434 Sum_probs=181.0
Q ss_pred cCCCcCceecCCccceEEEEEec-CC-------cEEEEEEecccCCCCchhhHHHHHHHHH-----------Hhhceeec
Q 042123 588 NDFDAKYCIGNGGHASVYRAELP-SG-------EVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSH 648 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~~-~~-------~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~ 648 (849)
++|...+.||+|+||.||+|... ++ ..||+|.+... .....+.+.+|+. ++++++..
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 83 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKA----HRNYSESFFEAASMMSKLSHKHLVLNYGVCVC 83 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGG----GGGGHHHHHHHHHHHHTSCCTTBCCEEEEECC
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccc----cHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEe
Confidence 57888999999999999999554 33 47999998653 2233445666654 36778888
Q ss_pred CCeeEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCc-------
Q 042123 649 ARHSFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYE------- 721 (849)
Q Consensus 649 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~------- 721 (849)
.+..++||||+++|+|.+++.... ..+++.++..++.||+.||+|||+. +|+||||||+||+++.++.
T Consensus 84 ~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~ 158 (289)
T 4fvq_A 84 GDENILVQEFVKFGSLDTYLKKNK--NCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPP 158 (289)
T ss_dssp TTCCEEEEECCTTCBHHHHHHHTG--GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCC
T ss_pred CCCCEEEEECCCCCCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccc
Confidence 889999999999999999997543 3489999999999999999999999 9999999999999998887
Q ss_pred -EEEeeecCCcccCCCCCCeeeccCCccccccccccC-CCCCccchHHHHHHHHHHHHhCCCC-CCcccccccccccccc
Q 042123 722 -AHVADFGIAKSLKPDSSNWTEFAGTCGYIAPELAYT-MKITEKCDVYSFGVLMWEVIKGKHP-RDFLSSISSSSLNTDV 798 (849)
Q Consensus 722 -~kl~DfG~a~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~SlGvil~el~tg~~P-f~~~~~~~~~~~~~~~ 798 (849)
+||+|||.+...... ....+++.|+|||.+.+ ..++.++||||||+++|||++|..| |...... .
T Consensus 159 ~~kl~Dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~--------~ 226 (289)
T 4fvq_A 159 FIKLSDPGISITVLPK----DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQ--------R 226 (289)
T ss_dssp EEEECCCCSCTTTSCH----HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--------H
T ss_pred eeeeccCcccccccCc----cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchH--------H
Confidence 999999998765322 33567899999999987 6789999999999999999995544 4322111 0
Q ss_pred cccccc-CCCCCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 799 ALDQML-DPRLPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 799 ~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
...... ....+... ...+.+++.+||+.||++|||++|++++|+
T Consensus 227 ~~~~~~~~~~~~~~~------~~~l~~li~~~l~~dp~~Rps~~~ll~~l~ 271 (289)
T 4fvq_A 227 KLQFYEDRHQLPAPK------AAELANLINNCMDYEPDHRPSFRAIIRDLN 271 (289)
T ss_dssp HHHHHHTTCCCCCCS------SCTTHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred HHHHhhccCCCCCCC------CHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 001111 11111111 113778899999999999999999999885
No 214
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.4e-35 Score=317.49 Aligned_cols=253 Identities=16% Similarity=0.252 Sum_probs=177.3
Q ss_pred cCCCcCceecCCccceEEEEEec-CCcEEEEEEecccCCCCc---hhhHHHHH-----HHHHHhhceeecCCeeEEEEEe
Q 042123 588 NDFDAKYCIGNGGHASVYRAELP-SGEVVAVKKFHSLLPCDQ---TVDQKEFL-----TEVEAFYGFCSHARHSFLLYEF 658 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~---~~~~~~~~-----~ei~~~~~~~~~~~~~~lV~e~ 658 (849)
++|...+.||+|+||+||+|+.. +++.||||++........ ...+...+ ..+..+++++...+..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 57889999999999999999664 789999999864321111 01111122 1244578888889999999999
Q ss_pred ccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccCCCCC
Q 042123 659 LERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLKPDSS 738 (849)
Q Consensus 659 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 738 (849)
+++ +|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 82 ~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~ 155 (324)
T 3mtl_A 82 LDK-DLKQYLDDCG--NIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK 155 (324)
T ss_dssp CSE-EHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC-----
T ss_pred ccc-CHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCCcc
Confidence 985 8988886543 3589999999999999999999999 999999999999999999999999999987654444
Q ss_pred CeeeccCCccccccccccC-CCCCccchHHHHHHHHHHHHhCCCCCCccccccccc-------------cc---cccccc
Q 042123 739 NWTEFAGTCGYIAPELAYT-MKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSS-------------LN---TDVALD 801 (849)
Q Consensus 739 ~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~-------------~~---~~~~~~ 801 (849)
......+|+.|+|||.+.+ ..++.++||||+||++|||++|+.||.......... .. ......
T Consensus 156 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 235 (324)
T 3mtl_A 156 TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFK 235 (324)
T ss_dssp -------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHH
T ss_pred ccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhc
Confidence 4555678999999999876 568999999999999999999999997543211000 00 000000
Q ss_pred cccCCCCCCCC--hhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 802 QMLDPRLPAPS--RSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 802 ~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
....+...... .........+.+++.+||+.||++|||++|++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 282 (324)
T 3mtl_A 236 TYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH 282 (324)
T ss_dssp HTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred ccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 00000000000 0001112347899999999999999999999875
No 215
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=1.1e-34 Score=305.21 Aligned_cols=239 Identities=21% Similarity=0.324 Sum_probs=178.4
Q ss_pred cCCCcCceecCCccceEEEEEec-CCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeEEE
Q 042123 588 NDFDAKYCIGNGGHASVYRAELP-SGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSFLL 655 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~lV 655 (849)
++|.+.+.||+|+||.||+|... +++.||||.+..... ........+.+|+. .+++++...+..++|
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKI-RSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHH-HHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccc-cchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 67899999999999999999765 799999999864311 01112334455543 367788888999999
Q ss_pred EEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccCC
Q 042123 656 YEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLKP 735 (849)
Q Consensus 656 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~~ 735 (849)
|||+++++|.+++... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 90 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~ 163 (276)
T 2h6d_A 90 MEYVSGGELFDYICKH---GRVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 163 (276)
T ss_dssp EECCCSCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC
T ss_pred EeccCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccCC
Confidence 9999999999998653 3589999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCeeeccCCccccccccccCCCC-CccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCChh
Q 042123 736 DSSNWTEFAGTCGYIAPELAYTMKI-TEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPAPSRS 814 (849)
Q Consensus 736 ~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 814 (849)
.. ......+++.|+|||.+.+..+ +.++||||+|+++|+|++|+.||...... .....+.......+...
T Consensus 164 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~~~ 234 (276)
T 2h6d_A 164 GE-FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVP--------TLFKKIRGGVFYIPEYL 234 (276)
T ss_dssp --------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCCCCCCTTS
T ss_pred Cc-ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHH--------HHHHHhhcCcccCchhc
Confidence 32 2344578999999999987765 68999999999999999999999743211 11111111111111111
Q ss_pred hHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 815 AQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 815 ~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
. ..+.+++.+||+.||++|||++|++++
T Consensus 235 ~----~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 235 N----RSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp C----HHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred C----HHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 2 247789999999999999999999986
No 216
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=1.4e-34 Score=330.92 Aligned_cols=244 Identities=22% Similarity=0.292 Sum_probs=188.0
Q ss_pred hcCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCc---------hhhHHHHHHHHH-----------Hhhce
Q 042123 587 TNDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQ---------TVDQKEFLTEVE-----------AFYGF 645 (849)
Q Consensus 587 ~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~---------~~~~~~~~~ei~-----------~~~~~ 645 (849)
.++|...+.||+|+||+||+|.. .+++.||||++........ ....+.+.+|+. .++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 47899999999999999999965 4688999999875421110 122345555654 36788
Q ss_pred eecCCeeEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCC---cE
Q 042123 646 CSHARHSFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEY---EA 722 (849)
Q Consensus 646 ~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~---~~ 722 (849)
+......++||||+++|+|.+++... ..+++.++..++.||+.||+|||+. +|+||||||+||+++.++ .+
T Consensus 115 ~~~~~~~~lv~e~~~gg~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~ 188 (504)
T 3q5i_A 115 FEDKKYFYLVTEFYEGGELFEQIINR---HKFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNI 188 (504)
T ss_dssp EECSSEEEEEEECCTTCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCSSE
T ss_pred EEcCCEEEEEEecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCccE
Confidence 88889999999999999999988653 3589999999999999999999999 999999999999998776 69
Q ss_pred EEeeecCCcccCCCCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCcccccccccccccccccc
Q 042123 723 HVADFGIAKSLKPDSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQ 802 (849)
Q Consensus 723 kl~DfG~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~ 802 (849)
||+|||++...... .......||+.|+|||++. +.++.++||||+||++|+|++|+.||..... ......
T Consensus 189 kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--------~~~~~~ 258 (504)
T 3q5i_A 189 KIVDFGLSSFFSKD-YKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQND--------QDIIKK 258 (504)
T ss_dssp EECCCTTCEECCTT-SCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHH
T ss_pred EEEECCCCEEcCCC-CccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHH
Confidence 99999999876543 2345567999999999876 4699999999999999999999999974322 122222
Q ss_pred ccCCCCCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 803 MLDPRLPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
+.......+...+......+.+++.+||+.||.+|||++|+++|
T Consensus 259 i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 259 VEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp HHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHcCCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 22333222222222233458899999999999999999999876
No 217
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=1.2e-34 Score=330.60 Aligned_cols=242 Identities=23% Similarity=0.334 Sum_probs=184.6
Q ss_pred hcCCCcCceecCCccceEEEEEec-CCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeEE
Q 042123 587 TNDFDAKYCIGNGGHASVYRAELP-SGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSFL 654 (849)
Q Consensus 587 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~l 654 (849)
.+.|+..+.||+|+||+||+|+.. ++..||||++....... .....+.+|+. ++++++......++
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 113 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVST--SSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYL 113 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-------CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCc--hHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 357999999999999999999654 78999999987543211 12334555544 47788888999999
Q ss_pred EEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCC---CcEEEeeecCCc
Q 042123 655 LYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLE---YEAHVADFGIAK 731 (849)
Q Consensus 655 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~---~~~kl~DfG~a~ 731 (849)
||||+++|+|.+++... ..+++.++..++.||+.||+|||+. +|+||||||+||+++.. +.+||+|||+++
T Consensus 114 v~e~~~~g~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~ 187 (494)
T 3lij_A 114 VMECYKGGELFDEIIHR---MKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSA 187 (494)
T ss_dssp EEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred EEecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCe
Confidence 99999999999988643 3589999999999999999999999 99999999999999764 559999999998
Q ss_pred ccCCCCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCC
Q 042123 732 SLKPDSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPAP 811 (849)
Q Consensus 732 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (849)
...... ......||+.|+|||++. ..++.++||||+||++|+|++|+.||..... ......+........
T Consensus 188 ~~~~~~-~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--------~~~~~~i~~~~~~~~ 257 (494)
T 3lij_A 188 VFENQK-KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTD--------QEILRKVEKGKYTFD 257 (494)
T ss_dssp ECBTTB-CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHTCCCCC
T ss_pred ECCCCc-cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhCCCCCC
Confidence 765432 334567999999999876 5699999999999999999999999974332 112222222222222
Q ss_pred ChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 812 SRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 812 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
...+......+.+++.+||+.||++|||+.|+++|
T Consensus 258 ~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 258 SPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp SGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred chhcccCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 22222233457899999999999999999999876
No 218
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=1.9e-34 Score=305.37 Aligned_cols=239 Identities=19% Similarity=0.295 Sum_probs=184.3
Q ss_pred HhcCCCcCceecCCccceEEEEEec-CCcEEEEEEecccCCCCchhhHHHHHHHHH------------HhhceeecCCee
Q 042123 586 ATNDFDAKYCIGNGGHASVYRAELP-SGEVVAVKKFHSLLPCDQTVDQKEFLTEVE------------AFYGFCSHARHS 652 (849)
Q Consensus 586 ~~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~ei~------------~~~~~~~~~~~~ 652 (849)
..++|+..+.||+|+||.||+|... +++.||||++...... ......+.+|+. ++++++.+.+..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~ 86 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAG--SVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHM 86 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTT--SHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccc--cHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeE
Confidence 3468999999999999999999664 7999999998754322 222344555543 367788888999
Q ss_pred EEEEEeccCCChhhhhccccc-ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCC------------
Q 042123 653 FLLYEFLERGSLAAILNTDAA-AQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLE------------ 719 (849)
Q Consensus 653 ~lV~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~------------ 719 (849)
++||||+++|+|.+++..... ...+++.++..++.||+.||+|||+. +|+||||||+||+++.+
T Consensus 87 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~ 163 (289)
T 1x8b_A 87 LIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDE 163 (289)
T ss_dssp EEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC--------------
T ss_pred EEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCccccccccc
Confidence 999999999999999975432 24589999999999999999999999 99999999999999844
Q ss_pred -------CcEEEeeecCCcccCCCCCCeeeccCCccccccccccCC-CCCccchHHHHHHHHHHHHhCCCCCCccccccc
Q 042123 720 -------YEAHVADFGIAKSLKPDSSNWTEFAGTCGYIAPELAYTM-KITEKCDVYSFGVLMWEVIKGKHPRDFLSSISS 791 (849)
Q Consensus 720 -------~~~kl~DfG~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~ 791 (849)
..+|++|||.+....... ...||+.|+|||.+.+. .+++++||||||+++|+|++|..|+.....
T Consensus 164 ~~~~~~~~~~kl~Dfg~~~~~~~~~----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~--- 236 (289)
T 1x8b_A 164 DDWASNKVMFKIGDLGHVTRISSPQ----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ--- 236 (289)
T ss_dssp ------CCCEEECCCTTCEETTCSC----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHH---
T ss_pred ccccCCceEEEEcccccccccCCcc----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhH---
Confidence 479999999998765432 24689999999998765 567899999999999999999887643211
Q ss_pred cccccccccccccCCCCCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhh
Q 042123 792 SSLNTDVALDQMLDPRLPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQL 847 (849)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L 847 (849)
...+.....+..+.. ....+.+++.+||+.||++|||++|++++-
T Consensus 237 --------~~~~~~~~~~~~~~~---~~~~~~~li~~~l~~dp~~Rps~~~ll~h~ 281 (289)
T 1x8b_A 237 --------WHEIRQGRLPRIPQV---LSQEFTELLKVMIHPDPERRPSAMALVKHS 281 (289)
T ss_dssp --------HHHHHTTCCCCCSSC---CCHHHHHHHHHHTCSSGGGSCCHHHHHTCT
T ss_pred --------HHHHHcCCCCCCCcc---cCHHHHHHHHHHhCCCcccCCCHHHHhhCh
Confidence 111112222111111 122478899999999999999999999873
No 219
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=2.1e-34 Score=308.91 Aligned_cols=247 Identities=25% Similarity=0.399 Sum_probs=177.4
Q ss_pred HhcCCCcCceecCCccceEEEEEec----CCcEEEEEEecccCCCCchhhHHHHHHHHHH-----------hhceeecCC
Q 042123 586 ATNDFDAKYCIGNGGHASVYRAELP----SGEVVAVKKFHSLLPCDQTVDQKEFLTEVEA-----------FYGFCSHAR 650 (849)
Q Consensus 586 ~~~~f~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~ei~~-----------~~~~~~~~~ 650 (849)
..++|...+.||+|+||.||+|... ++..||||.+..... .....+.+.+|+.. +++++....
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 109 (313)
T 3brb_A 32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNS--SQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMS 109 (313)
T ss_dssp CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CC--CHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC--
T ss_pred CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEecccc--chhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecc
Confidence 4467888999999999999999653 345899999865322 22234456666553 556665543
Q ss_pred -----eeEEEEEeccCCChhhhhccc---ccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcE
Q 042123 651 -----HSFLLYEFLERGSLAAILNTD---AAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEA 722 (849)
Q Consensus 651 -----~~~lV~e~~~~gsL~~~l~~~---~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~ 722 (849)
..++||||+++|+|.+++... .....+++.+++.++.||+.||+|||+. +|+||||||+||+++.++.+
T Consensus 110 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~ 186 (313)
T 3brb_A 110 SQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTV 186 (313)
T ss_dssp -----CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCE
T ss_pred ccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcE
Confidence 359999999999999998432 1234689999999999999999999999 99999999999999999999
Q ss_pred EEeeecCCcccCCCCC--CeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccccccccccc
Q 042123 723 HVADFGIAKSLKPDSS--NWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIK-GKHPRDFLSSISSSSLNTDVA 799 (849)
Q Consensus 723 kl~DfG~a~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~t-g~~Pf~~~~~~~~~~~~~~~~ 799 (849)
||+|||+++....... ......+++.|+|||.+.+..++.++||||||+++|+|++ |..||...... ..
T Consensus 187 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--------~~ 258 (313)
T 3brb_A 187 CVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH--------EM 258 (313)
T ss_dssp EECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--------GH
T ss_pred EEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHH--------HH
Confidence 9999999987654321 1233456889999999999999999999999999999999 88998743321 11
Q ss_pred cccccCCCCCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 800 LDQMLDPRLPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
.............. .....+.+++.+||+.||++|||+++++++|+
T Consensus 259 ~~~~~~~~~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~ 304 (313)
T 3brb_A 259 YDYLLHGHRLKQPE---DCLDELYEIMYSCWRTDPLDRPTFSVLRLQLE 304 (313)
T ss_dssp HHHHHTTCCCCCBT---TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHcCCCCCCCc---cccHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 11122221111111 12234888999999999999999999999875
No 220
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=1.2e-34 Score=313.37 Aligned_cols=245 Identities=20% Similarity=0.292 Sum_probs=160.7
Q ss_pred hcCCCcCc-eecCCccceEEEEEec-CCcEEEEEEecccCCCCchhhHHHHHHH--------HHHhhceeec----CCee
Q 042123 587 TNDFDAKY-CIGNGGHASVYRAELP-SGEVVAVKKFHSLLPCDQTVDQKEFLTE--------VEAFYGFCSH----ARHS 652 (849)
Q Consensus 587 ~~~f~~~~-~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e--------i~~~~~~~~~----~~~~ 652 (849)
.++|.+.+ .||+|+||.||+|... +++.||||++... ....+++..+ +..+++++.. ....
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 101 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS-----PKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCL 101 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc-----HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceE
Confidence 36788854 6999999999999664 7999999998642 1112222222 2235566544 4568
Q ss_pred EEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecC---CCcEEEeeecC
Q 042123 653 FLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDL---EYEAHVADFGI 729 (849)
Q Consensus 653 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~DfG~ 729 (849)
++||||+++|+|.+++.... ...+++.++..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+
T Consensus 102 ~lv~e~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~ 177 (336)
T 3fhr_A 102 LIIMECMEGGELFSRIQERG-DQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGF 177 (336)
T ss_dssp EEEEECCTTEEHHHHHHTC--CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTT
T ss_pred EEEEeccCCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEecccc
Confidence 99999999999999997543 24589999999999999999999999 9999999999999976 45599999999
Q ss_pred CcccCCCCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCC
Q 042123 730 AKSLKPDSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLP 809 (849)
Q Consensus 730 a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 (849)
++..... ......+|+.|+|||.+.+..++.++||||||+++|+|++|+.||.......... ............
T Consensus 178 ~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~----~~~~~~~~~~~~ 251 (336)
T 3fhr_A 178 AKETTQN--ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISP----GMKRRIRLGQYG 251 (336)
T ss_dssp CEEC------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-------------------------C
T ss_pred ceecccc--ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhh----hHHHhhhccccc
Confidence 9866532 2344678999999999988889999999999999999999999997443211100 000111111111
Q ss_pred CCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 810 APSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 810 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
.+..........+.+++.+||+.||++|||++|++++
T Consensus 252 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 288 (336)
T 3fhr_A 252 FPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNH 288 (336)
T ss_dssp CCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred cCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 1111111223347889999999999999999999986
No 221
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=2.3e-34 Score=306.25 Aligned_cols=241 Identities=26% Similarity=0.433 Sum_probs=180.6
Q ss_pred cCCCcCceecCCccceEEEEEecC----CcEEEEEEecccCCCCchhhHHHHHHHHH-----------Hhhcee-ecCCe
Q 042123 588 NDFDAKYCIGNGGHASVYRAELPS----GEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFC-SHARH 651 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~-~~~~~ 651 (849)
.+|+..+.||+|+||.||+|...+ ...||||.+.... .......+.+|+. .+++++ ..++.
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 101 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT---DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGS 101 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCC---SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSC
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCC---CHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCc
Confidence 467788999999999999997532 2358999887532 2233445666654 355654 45568
Q ss_pred eEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCc
Q 042123 652 SFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAK 731 (849)
Q Consensus 652 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~ 731 (849)
.++||||+++|+|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 102 ~~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~ 176 (298)
T 3f66_A 102 PLVVLPYMKHGDLRNFIRNET--HNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLAR 176 (298)
T ss_dssp CEEEEECCTTCBHHHHHHCTT--CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGC
T ss_pred eEEEEeCCCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECcccccc
Confidence 899999999999999996533 4589999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCC----CCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCC
Q 042123 732 SLKPDS----SNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIK-GKHPRDFLSSISSSSLNTDVALDQMLDP 806 (849)
Q Consensus 732 ~~~~~~----~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 806 (849)
...... .......+|+.|+|||.+.+..++.++||||+|+++|||++ |..||...... .........
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~--------~~~~~~~~~ 248 (298)
T 3f66_A 177 DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--------DITVYLLQG 248 (298)
T ss_dssp CCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTT--------THHHHHHTT
T ss_pred cccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHH--------HHHHHHhcC
Confidence 664322 12234457789999999999999999999999999999999 55565532211 111111111
Q ss_pred CCCC-CChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 807 RLPA-PSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 807 ~~~~-~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
.... +...+ ..+.+++.+||+.||++|||++|+++.|+
T Consensus 249 ~~~~~~~~~~----~~l~~li~~~l~~~p~~Rps~~ell~~L~ 287 (298)
T 3f66_A 249 RRLLQPEYCP----DPLYEVMLKCWHPKAEMRPSFSELVSRIS 287 (298)
T ss_dssp CCCCCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCCCccCC----HHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 1111 11112 24788999999999999999999999874
No 222
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=5.3e-35 Score=333.11 Aligned_cols=243 Identities=23% Similarity=0.365 Sum_probs=192.0
Q ss_pred hcCCCcCceecCCccceEEEEEec-CCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeEE
Q 042123 587 TNDFDAKYCIGNGGHASVYRAELP-SGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSFL 654 (849)
Q Consensus 587 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~l 654 (849)
.++|+..+.||+|+||.||+|+.. +++.||||++...... .......+.+|+. ++++++...+..++
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 103 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVK-QKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYL 103 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC-BSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcc-cchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 367999999999999999999654 7999999998654221 1223455666654 36788888899999
Q ss_pred EEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeee---cCCCcEEEeeecCCc
Q 042123 655 LYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLL---DLEYEAHVADFGIAK 731 (849)
Q Consensus 655 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~DfG~a~ 731 (849)
||||+++|+|.+++... ..+++.++..++.||+.||+|||+. +|+||||||+||++ +.++.+||+|||+++
T Consensus 104 v~e~~~~~~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 177 (484)
T 3nyv_A 104 VGEVYTGGELFDEIISR---KRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLST 177 (484)
T ss_dssp EECCCCSCBHHHHHHTC---SCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHH
T ss_pred EEecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeE
Confidence 99999999999988654 3489999999999999999999999 99999999999999 567899999999998
Q ss_pred ccCCCCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCC
Q 042123 732 SLKPDSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPAP 811 (849)
Q Consensus 732 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (849)
.+.... ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||...... .....+.......+
T Consensus 178 ~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--------~~~~~i~~~~~~~~ 247 (484)
T 3nyv_A 178 HFEASK-KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEY--------DILKKVEKGKYTFE 247 (484)
T ss_dssp HBCCCC-SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCCCCCC
T ss_pred Eccccc-ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHH--------HHHHHHHcCCCCCC
Confidence 765432 3455679999999999876 6999999999999999999999999743321 12222222222222
Q ss_pred ChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 812 SRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 812 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
...+......+.+++.+||+.||++|||++|+++|
T Consensus 248 ~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 248 LPQWKKVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp SGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 22222334458899999999999999999999976
No 223
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=1.6e-34 Score=307.62 Aligned_cols=245 Identities=22% Similarity=0.337 Sum_probs=188.0
Q ss_pred hcCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCC-----chhhHHHHHHHHH------------Hhhceeec
Q 042123 587 TNDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCD-----QTVDQKEFLTEVE------------AFYGFCSH 648 (849)
Q Consensus 587 ~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-----~~~~~~~~~~ei~------------~~~~~~~~ 648 (849)
.++|+..+.||+|+||.||+|.. .+++.||||.+....... .....+.+.+|+. .+++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 95 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence 47899999999999999999966 468999999986532111 0112233444433 35677888
Q ss_pred CCeeEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeec
Q 042123 649 ARHSFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFG 728 (849)
Q Consensus 649 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG 728 (849)
....++||||+++|+|.+++... ..+++.++..++.||+.||+|||+. +++||||||+||+++.++.+||+|||
T Consensus 96 ~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg 169 (298)
T 1phk_A 96 NTFFFLVFDLMKKGELFDYLTEK---VTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFG 169 (298)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCT
T ss_pred CCeEEEEEeccCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEeccc
Confidence 88999999999999999999643 3589999999999999999999999 99999999999999999999999999
Q ss_pred CCcccCCCCCCeeeccCCcccccccccc------CCCCCccchHHHHHHHHHHHHhCCCCCCcccccccccccccccccc
Q 042123 729 IAKSLKPDSSNWTEFAGTCGYIAPELAY------TMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQ 802 (849)
Q Consensus 729 ~a~~~~~~~~~~~~~~g~~~y~aPE~~~------~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~ 802 (849)
.+....... ......+++.|+|||.+. ...++.++||||||+++|+|++|+.||...... .....
T Consensus 170 ~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--------~~~~~ 240 (298)
T 1phk_A 170 FSCQLDPGE-KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQM--------LMLRM 240 (298)
T ss_dssp TCEECCTTC-CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHH
T ss_pred chhhcCCCc-ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHH--------HHHHH
Confidence 998765432 334567899999999875 456889999999999999999999998643211 11111
Q ss_pred ccCCCCCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 803 MLDPRLPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
+.......+..........+.+++.+||+.||++|||++|++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (298)
T 1phk_A 241 IMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH 284 (298)
T ss_dssp HHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred HhcCCcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHhC
Confidence 11112111111111223458899999999999999999999875
No 224
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.8e-35 Score=318.27 Aligned_cols=257 Identities=22% Similarity=0.287 Sum_probs=182.0
Q ss_pred HHhcCCCcCceecCCccceEEEEEec-CCcEEEEEEecccCCCCc-hhhHHHHHHHHH-----------HhhceeecCCe
Q 042123 585 KATNDFDAKYCIGNGGHASVYRAELP-SGEVVAVKKFHSLLPCDQ-TVDQKEFLTEVE-----------AFYGFCSHARH 651 (849)
Q Consensus 585 ~~~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~-~~~~~~~~~ei~-----------~~~~~~~~~~~ 651 (849)
...++|+..+.||+|+||.||+|+.. +|+.||||++........ ....+.+.+|+. .+++++.+...
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence 34578999999999999999999764 689999999864322111 111123344433 36778888889
Q ss_pred eEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCc
Q 042123 652 SFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAK 731 (849)
Q Consensus 652 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~ 731 (849)
.++||||+++ +|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 87 ~~lv~e~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~ 160 (346)
T 1ua2_A 87 ISLVFDFMET-DLEVIIKDNS--LVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAK 160 (346)
T ss_dssp CEEEEECCSE-EHHHHHTTCC--SSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGS
T ss_pred eEEEEEcCCC-CHHHHHHhcC--cCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccce
Confidence 9999999986 8888886543 3588999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCCeeeccCCccccccccccCC-CCCccchHHHHHHHHHHHHhCCCCCCccccccccc-------------cccc
Q 042123 732 SLKPDSSNWTEFAGTCGYIAPELAYTM-KITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSS-------------LNTD 797 (849)
Q Consensus 732 ~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~-------------~~~~ 797 (849)
.............+|+.|+|||.+.+. .++.++||||+||++|||++|..||.......... ....
T Consensus 161 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 240 (346)
T 1ua2_A 161 SFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDM 240 (346)
T ss_dssp TTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSST
T ss_pred eccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhh
Confidence 776554455567889999999998764 48899999999999999999999987543211000 0000
Q ss_pred cccccccC-CCCCCCC--hhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhh
Q 042123 798 VALDQMLD-PRLPAPS--RSAQEKLISIMEVAFSCFNESPESRPTMKIISQQL 847 (849)
Q Consensus 798 ~~~~~~~~-~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L 847 (849)
....+.+. ...+... .........+.+++.+||+.||++|||++|++++-
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~ 293 (346)
T 1ua2_A 241 CSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMK 293 (346)
T ss_dssp TSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSG
T ss_pred ccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcCh
Confidence 00000000 0001000 00011224588999999999999999999999863
No 225
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=1.2e-34 Score=311.28 Aligned_cols=245 Identities=24% Similarity=0.392 Sum_probs=184.7
Q ss_pred CCcCceecCCccceEEEEEec-----CCcEEEEEEecccCCCCchhhHHHHHHHHHH-----------hhceeec--CCe
Q 042123 590 FDAKYCIGNGGHASVYRAELP-----SGEVVAVKKFHSLLPCDQTVDQKEFLTEVEA-----------FYGFCSH--ARH 651 (849)
Q Consensus 590 f~~~~~lG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~~ei~~-----------~~~~~~~--~~~ 651 (849)
|+..+.||+|+||+||+|.+. +++.||||++.... .......+.+|+.. +++++.. ...
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 109 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADA---GPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAAS 109 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTC---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEecccc---ChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCce
Confidence 488899999999999888542 68899999987542 22334556666543 5666665 467
Q ss_pred eEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCc
Q 042123 652 SFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAK 731 (849)
Q Consensus 652 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~ 731 (849)
.++||||+++|+|.+++... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 110 ~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~ 182 (318)
T 3lxp_A 110 LQLVMEYVPLGSLRDYLPRH----SIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAK 182 (318)
T ss_dssp EEEEECCCTTCBHHHHGGGS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCE
T ss_pred EEEEEecccCCcHHHHHhhC----CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCccccc
Confidence 89999999999999999653 389999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCC---CeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccc-----c-cccccccccc
Q 042123 732 SLKPDSS---NWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISS-----S-SLNTDVALDQ 802 (849)
Q Consensus 732 ~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~-----~-~~~~~~~~~~ 802 (849)
....... ......+++.|+|||.+.+..++.++||||+|+++|||++|+.||........ . .........+
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (318)
T 3lxp_A 183 AVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTE 262 (318)
T ss_dssp ECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHH
T ss_pred cccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHH
Confidence 7764432 12334578889999999998999999999999999999999999874321100 0 0000001111
Q ss_pred ccCCC--CCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 803 MLDPR--LPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 803 ~~~~~--~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
.+... .+.+.. ....+.+++.+||+.||++|||++|+++.|+
T Consensus 263 ~~~~~~~~~~~~~----~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 306 (318)
T 3lxp_A 263 LLERGERLPRPDK----CPAEVYHLMKNCWETEASFRPTFENLIPILK 306 (318)
T ss_dssp HHHTTCCCCCCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHhcccCCCCCcc----ccHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 11111 111111 1234888999999999999999999998875
No 226
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=9.5e-35 Score=313.55 Aligned_cols=252 Identities=17% Similarity=0.225 Sum_probs=177.0
Q ss_pred HHhcCCCcCceecCCccceEEEEE-ecCCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCee
Q 042123 585 KATNDFDAKYCIGNGGHASVYRAE-LPSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHS 652 (849)
Q Consensus 585 ~~~~~f~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~ 652 (849)
...++|+..+.||+|+||+||+|. ..+++.||||++..... .......+.+|+. .+++++.+....
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHE--EEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRL 108 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC----------CHHHHHHGGGCCCTTBCCEEEEEEETTEE
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEccccc--ccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEE
Confidence 345789999999999999999995 45799999999865422 1112233444443 467788888999
Q ss_pred EEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeec-----CCCcEEEeee
Q 042123 653 FLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLD-----LEYEAHVADF 727 (849)
Q Consensus 653 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~-----~~~~~kl~Df 727 (849)
++||||+++ +|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+||+++ .++.+||+||
T Consensus 109 ~lv~e~~~~-~L~~~~~~~~---~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Df 181 (329)
T 3gbz_A 109 HLIFEYAEN-DLKKYMDKNP---DVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDF 181 (329)
T ss_dssp EEEEECCSE-EHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCT
T ss_pred EEEEecCCC-CHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcC
Confidence 999999985 9999986543 489999999999999999999999 999999999999994 4556999999
Q ss_pred cCCcccCCCCCCeeeccCCccccccccccCC-CCCccchHHHHHHHHHHHHhCCCCCCccccccccc-------------
Q 042123 728 GIAKSLKPDSSNWTEFAGTCGYIAPELAYTM-KITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSS------------- 793 (849)
Q Consensus 728 G~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~------------- 793 (849)
|+++.............+|+.|+|||++.+. .++.++||||+||++|||++|+.||..........
T Consensus 182 g~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 261 (329)
T 3gbz_A 182 GLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTT 261 (329)
T ss_dssp THHHHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTT
T ss_pred CCccccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhh
Confidence 9998776444445556789999999998874 48999999999999999999999997533211000
Q ss_pred cccccccccccCCCCCCCCh-hhH-----HHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 794 LNTDVALDQMLDPRLPAPSR-SAQ-----EKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~-~~~-----~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
.........+ ....+.... ... .....+.+++.+||+.||++|||++|+++|
T Consensus 262 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 319 (329)
T 3gbz_A 262 WPGVTALPDW-KQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH 319 (329)
T ss_dssp STTGGGSTTC-CTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred hhhhhhhhhh-hhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCC
Confidence 0000000000 000000000 000 012457899999999999999999999986
No 227
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=3.4e-33 Score=301.66 Aligned_cols=289 Identities=19% Similarity=0.225 Sum_probs=172.6
Q ss_pred ccCeEeccCCcccccCCccCCCCCCCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEEcC
Q 042123 85 YMSRLVINDNSLSGFIPPHIGNLKFLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLN 164 (849)
Q Consensus 85 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 164 (849)
+++.++++++.++ .+|..+. ++|++|+|++|+|+++.+..|.++++|++|+|++|.+++..|..|.++++|++|+|+
T Consensus 32 ~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (330)
T 1xku_A 32 HLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 108 (330)
T ss_dssp ETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECC
Confidence 4455555555554 3344333 466677777777776666667777777777777777766666667777777777777
Q ss_pred CCcccccCCcCCCCCCCCCEEEccCCCCcCcCcccccCCCCCCEEeccCCcCcc--CCCcCccCccccchhhhccccccC
Q 042123 165 DNQLIGYIPRPFSNLTSVSTLRLSRNDLFGSIPDEIGKMRSLSVLDLNQNQFKG--VLPPSISNLTNLKELALLYNHLSG 242 (849)
Q Consensus 165 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~L~~N~l~~ 242 (849)
+|+++.++...+ ++|++|++++|++++..+..|.++++|++|++++|.++. ..+..|..+++|++|++++|.++
T Consensus 109 ~n~l~~l~~~~~---~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~- 184 (330)
T 1xku_A 109 KNQLKELPEKMP---KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT- 184 (330)
T ss_dssp SSCCSBCCSSCC---TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-
T ss_pred CCcCCccChhhc---ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc-
Confidence 777665443332 567777777777776666667777777777777777753 55666677777777777776665
Q ss_pred CCCcchhhhhhhhhhccCcCCCCCCCcccCCCCCcceeeecccccccccCCCCCCcccccEEEccCccccCchhhhhCCC
Q 042123 243 SIPPSLGNLILRQLLLSGNHFTGYLPYNICRGGALEIFTVSENHFQGTIPTSLRNCTSLIRVRLNGNNLTGNISEALGIY 322 (849)
Q Consensus 243 ~~p~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 322 (849)
.+|..+. ++|+.|++++|++++..|..|..+++|+.|++++|.+++..+..+..+
T Consensus 185 ~l~~~~~-------------------------~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 239 (330)
T 1xku_A 185 TIPQGLP-------------------------PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANT 239 (330)
T ss_dssp SCCSSCC-------------------------TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGS
T ss_pred cCCcccc-------------------------ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCC
Confidence 2332111 345555555555555555555556666666666666665555556666
Q ss_pred CCCCEEeccCccccCcccccCCCCCCCcEEeccCCccccCCCCCcccc------ccccccccccccccc--cCchhhcCC
Q 042123 323 PNLTFIDLSRNNFYGEISSNWGKFPKLGTLNVSMNNITGGLPREIGNS------SQLQAFDLSLNHIVG--EIPKELGKL 394 (849)
Q Consensus 323 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l------~~L~~L~L~~N~i~~--~~~~~~~~l 394 (849)
++|+.|+|++|++. .+|..+..+++|++|++++|.|++..+..|... ..|+.|++++|.+.. ..|..|..+
T Consensus 240 ~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~ 318 (330)
T 1xku_A 240 PHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCV 318 (330)
T ss_dssp TTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTC
T ss_pred CCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccc
Confidence 66666666666665 445555666666666666666665444444332 445555566655542 344556666
Q ss_pred CCCcEEEccCcc
Q 042123 395 NPLTKLILRGNQ 406 (849)
Q Consensus 395 ~~L~~L~L~~N~ 406 (849)
++|+.++|++|+
T Consensus 319 ~~l~~l~L~~N~ 330 (330)
T 1xku_A 319 YVRAAVQLGNYK 330 (330)
T ss_dssp CCGGGEEC----
T ss_pred cceeEEEecccC
Confidence 666666666653
No 228
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=4.9e-35 Score=335.95 Aligned_cols=241 Identities=25% Similarity=0.439 Sum_probs=188.5
Q ss_pred HhcCCCcCceecCCccceEEEEEecCCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeEE
Q 042123 586 ATNDFDAKYCIGNGGHASVYRAELPSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSFL 654 (849)
Q Consensus 586 ~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~l 654 (849)
..++|+..+.||+|+||.||+|.+.++..||||++..... ..+.+.+|+. ++++++.+ ...++
T Consensus 265 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-----~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~l 338 (535)
T 2h8h_A 265 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-----SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYI 338 (535)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSS-----CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEE
T ss_pred chhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCC-----CHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceE
Confidence 3467888999999999999999988788899999875321 2345566654 35667655 67899
Q ss_pred EEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccC
Q 042123 655 LYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLK 734 (849)
Q Consensus 655 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~ 734 (849)
||||+++|+|.+++.... ...+++.++..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 339 v~e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 414 (535)
T 2h8h_A 339 VTEYMSKGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIE 414 (535)
T ss_dssp EECCCTTEEHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCC
T ss_pred eeehhcCCcHHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecC
Confidence 999999999999997533 24589999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCC-CeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCC-CCCCC
Q 042123 735 PDSS-NWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIK-GKHPRDFLSSISSSSLNTDVALDQMLDP-RLPAP 811 (849)
Q Consensus 735 ~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 811 (849)
.... ......++..|+|||.+.+..++.++|||||||++|||++ |+.||...... .....+... +.+.+
T Consensus 415 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~--------~~~~~i~~~~~~~~~ 486 (535)
T 2h8h_A 415 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--------EVLDQVERGYRMPCP 486 (535)
T ss_dssp CHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHH--------HHHHHHHTTCCCCCC
T ss_pred CCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHcCCCCCCC
Confidence 3211 1123346788999999998899999999999999999999 99999743221 111111111 12222
Q ss_pred ChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 812 SRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 812 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
... ...+.+++.+||+.||++|||+++|++.|+
T Consensus 487 ~~~----~~~l~~li~~cl~~dP~~RPt~~~l~~~L~ 519 (535)
T 2h8h_A 487 PEC----PESLHDLMCQCWRKEPEERPTFEYLQAFLE 519 (535)
T ss_dssp TTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCC----CHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 222 234788999999999999999999999875
No 229
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1.6e-34 Score=305.17 Aligned_cols=240 Identities=20% Similarity=0.363 Sum_probs=185.4
Q ss_pred HhcCCCcCceecCCccceEEEEEec-CCcEEEEEEecccCCCCchhhHHHHHHH-----HHHhhceeec-----------
Q 042123 586 ATNDFDAKYCIGNGGHASVYRAELP-SGEVVAVKKFHSLLPCDQTVDQKEFLTE-----VEAFYGFCSH----------- 648 (849)
Q Consensus 586 ~~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e-----i~~~~~~~~~----------- 648 (849)
...+|+..+.||+|+||.||+|... +++.||||++.... .....+...++. +..+++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 86 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN--EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKN 86 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS--GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-------
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc--HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccccc
Confidence 3467999999999999999999765 79999999986532 111112222222 2235555532
Q ss_pred -----CCeeEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEE
Q 042123 649 -----ARHSFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAH 723 (849)
Q Consensus 649 -----~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~k 723 (849)
....++||||+++|+|.+++.... ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~k 162 (284)
T 2a19_B 87 SSRSKTKCLFIQMEFCDKGTLEQWIEKRR-GEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVK 162 (284)
T ss_dssp --CCEEEEEEEEECCCCSCBHHHHHHHGG-GSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEE
T ss_pred ccccCcceEEEEEeccCCCCHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCCCCEE
Confidence 445799999999999999997543 34689999999999999999999999 999999999999999999999
Q ss_pred EeeecCCcccCCCCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccc
Q 042123 724 VADFGIAKSLKPDSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQM 803 (849)
Q Consensus 724 l~DfG~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~ 803 (849)
|+|||++....... ......+++.|+|||.+.+..++.++||||||+++|||++|..||..... .....
T Consensus 163 l~Dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~----------~~~~~ 231 (284)
T 2a19_B 163 IGDFGLVTSLKNDG-KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSK----------FFTDL 231 (284)
T ss_dssp ECCCTTCEESSCCS-CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHH----------HHHHH
T ss_pred ECcchhheeccccc-cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHH----------HHHHh
Confidence 99999998765432 23445789999999999998999999999999999999999999752211 11111
Q ss_pred cCCCCCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 804 LDPRLPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 804 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
....++.. . ...+.+++.+||+.||++|||+.|++++|+
T Consensus 232 ~~~~~~~~--~----~~~~~~li~~~l~~dp~~Rps~~e~l~~l~ 270 (284)
T 2a19_B 232 RDGIISDI--F----DKKEKTLLQKLLSKKPEDRPNTSEILRTLT 270 (284)
T ss_dssp HTTCCCTT--S----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred hccccccc--C----CHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 22222211 1 123778899999999999999999999875
No 230
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=8.8e-35 Score=313.80 Aligned_cols=243 Identities=23% Similarity=0.382 Sum_probs=176.8
Q ss_pred HHhcCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHHHH------------Hhhceeec---
Q 042123 585 KATNDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE------------AFYGFCSH--- 648 (849)
Q Consensus 585 ~~~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~------------~~~~~~~~--- 648 (849)
...++|+..+.||+|+||.||+|+. .+++.||||++...... ...+.+|+. .+++++..
T Consensus 21 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-----~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~ 95 (326)
T 2x7f_A 21 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE-----EEEIKQEINMLKKYSHHRNIATYYGAFIKKNP 95 (326)
T ss_dssp CCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSST-----THHHHHHHHHHHHHCCSTTBCCEEEEEEECC-
T ss_pred CCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCccc-----HHHHHHHHHHHHhccCCCCeeeeeeEEeeccC
Confidence 3457899999999999999999966 57899999998653221 122333322 35566554
Q ss_pred ---CCeeEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEe
Q 042123 649 ---ARHSFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVA 725 (849)
Q Consensus 649 ---~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~ 725 (849)
....++||||+++|+|.+++.... ...+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 96 ~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~kl~ 171 (326)
T 2x7f_A 96 PGMDDQLWLVMEFCGAGSVTDLIKNTK-GNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLV 171 (326)
T ss_dssp -CCCCEEEEEEECCTTEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEEC
T ss_pred ccccceEEEEEEcCCCCcHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEEEe
Confidence 467899999999999999997543 34689999999999999999999999 99999999999999999999999
Q ss_pred eecCCcccCCCCCCeeeccCCcccccccccc-----CCCCCccchHHHHHHHHHHHHhCCCCCCcccccccccccccccc
Q 042123 726 DFGIAKSLKPDSSNWTEFAGTCGYIAPELAY-----TMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVAL 800 (849)
Q Consensus 726 DfG~a~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~ 800 (849)
|||++..............|++.|+|||.+. +..++.++||||||+++|+|++|+.||.......... ..
T Consensus 172 Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-----~~ 246 (326)
T 2x7f_A 172 DFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALF-----LI 246 (326)
T ss_dssp CCTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH-----HH
T ss_pred eCcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHH-----Hh
Confidence 9999987654433344567899999999986 5678899999999999999999999997433211100 00
Q ss_pred ccccCCCCCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 801 DQMLDPRLPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
.....+.... ... ...+.+++.+||+.||++|||+++++++
T Consensus 247 ~~~~~~~~~~-~~~----~~~l~~li~~~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 247 PRNPAPRLKS-KKW----SKKFQSFIESCLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp HHSCCCCCSC-SCS----CHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred hcCccccCCc-ccc----CHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0000111111 111 2347889999999999999999999875
No 231
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=2.3e-34 Score=322.19 Aligned_cols=189 Identities=24% Similarity=0.390 Sum_probs=151.5
Q ss_pred hcCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHHHHH-----------hhceeecC-----
Q 042123 587 TNDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVEA-----------FYGFCSHA----- 649 (849)
Q Consensus 587 ~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~~-----------~~~~~~~~----- 649 (849)
.++|+..+.||+|+||.||+|.. .+++.||||++.... ......+.+.+|+.. +++++...
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~ 102 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMF--EDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKF 102 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTT--TSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchh--cChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcC
Confidence 36899999999999999999965 568899999997542 233344566677553 45555444
Q ss_pred CeeEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecC
Q 042123 650 RHSFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGI 729 (849)
Q Consensus 650 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~ 729 (849)
...|+||||+++ +|.+++... ..+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 103 ~~~~lv~e~~~~-~L~~~~~~~---~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGl 175 (432)
T 3n9x_A 103 DELYIVLEIADS-DLKKLFKTP---IFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGL 175 (432)
T ss_dssp CCEEEEEECCSE-EHHHHHHSS---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred CeEEEEEecCCc-CHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCC
Confidence 578999999974 999998653 3589999999999999999999999 999999999999999999999999999
Q ss_pred CcccCCCCC----------------------CeeeccCCccccccccc-cCCCCCccchHHHHHHHHHHHHhCCCCCC
Q 042123 730 AKSLKPDSS----------------------NWTEFAGTCGYIAPELA-YTMKITEKCDVYSFGVLMWEVIKGKHPRD 784 (849)
Q Consensus 730 a~~~~~~~~----------------------~~~~~~g~~~y~aPE~~-~~~~~~~~~Dv~SlGvil~el~tg~~Pf~ 784 (849)
|+....... .....+||+.|+|||++ ....++.++||||+||++|||++|..||.
T Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 176 ARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp CEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred cccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 987654321 23567899999999986 56679999999999999999999776664
No 232
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=1.7e-34 Score=311.57 Aligned_cols=242 Identities=26% Similarity=0.461 Sum_probs=182.8
Q ss_pred cCCCcCceecCCccceEEEEEec-CCcEE--EEEEecccCCCCchhhHHHHHHHHH------------HhhceeecCCee
Q 042123 588 NDFDAKYCIGNGGHASVYRAELP-SGEVV--AVKKFHSLLPCDQTVDQKEFLTEVE------------AFYGFCSHARHS 652 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~v--avK~~~~~~~~~~~~~~~~~~~ei~------------~~~~~~~~~~~~ 652 (849)
++|+..+.||+|+||.||+|+.. ++..+ |||.+...... ...+.+.+|+. ++++++.+.+..
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~---~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~ 101 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASK---DDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYL 101 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC---------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccch---HHHHHHHHHHHHHHhccCCCchhhhceeeeeCCce
Confidence 68889999999999999999653 56644 99988653221 12233444433 367778888899
Q ss_pred EEEEEeccCCChhhhhcccc-------------cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCC
Q 042123 653 FLLYEFLERGSLAAILNTDA-------------AAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLE 719 (849)
Q Consensus 653 ~lV~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~ 719 (849)
++||||+++|+|.+++.... ....+++.+++.++.||+.||+|||+. +|+||||||+||+++.+
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~ 178 (327)
T 1fvr_A 102 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGEN 178 (327)
T ss_dssp EEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGG
T ss_pred EEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCC
Confidence 99999999999999997543 124689999999999999999999999 99999999999999999
Q ss_pred CcEEEeeecCCcccCCCCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCcccccccccccccc
Q 042123 720 YEAHVADFGIAKSLKPDSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIK-GKHPRDFLSSISSSSLNTDV 798 (849)
Q Consensus 720 ~~~kl~DfG~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~t-g~~Pf~~~~~~~~~~~~~~~ 798 (849)
+.+||+|||+++..... .......+++.|+|||.+.+..++.++||||||+++|||++ |+.||.......
T Consensus 179 ~~~kL~Dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~-------- 249 (327)
T 1fvr_A 179 YVAKIADFGLSRGQEVY-VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE-------- 249 (327)
T ss_dssp GCEEECCTTCEESSCEE-CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--------
T ss_pred CeEEEcccCcCcccccc-ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHH--------
Confidence 99999999998754322 12233456889999999988889999999999999999998 999997433211
Q ss_pred ccccccCC-CCCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 799 ALDQMLDP-RLPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 799 ~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
....+... ....+... ...+.+++.+||+.||++|||+++++++|+
T Consensus 250 ~~~~~~~~~~~~~~~~~----~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 296 (327)
T 1fvr_A 250 LYEKLPQGYRLEKPLNC----DDEVYDLMRQCWREKPYERPSFAQILVSLN 296 (327)
T ss_dssp HHHHGGGTCCCCCCTTB----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHhhcCCCCCCCCCC----CHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 11111111 11111112 234788999999999999999999999874
No 233
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=2.3e-34 Score=312.13 Aligned_cols=239 Identities=22% Similarity=0.335 Sum_probs=166.3
Q ss_pred cCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHHHH------------Hhhcee--------
Q 042123 588 NDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE------------AFYGFC-------- 646 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~------------~~~~~~-------- 646 (849)
.+|+..+.||+|+||.||+|+. .+++.||||++... .....+.+.+|+. .+++++
T Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~ 103 (337)
T 3ll6_A 28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN----EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESD 103 (337)
T ss_dssp EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEES----SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTST
T ss_pred ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCC----chHHHHHHHHHHHHHHHhccCCChhhccccccccccccc
Confidence 5788999999999999999965 47899999988543 1222334444443 244444
Q ss_pred ecCCeeEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCCeeecCCCcEEE
Q 042123 647 SHARHSFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPP--IVHRDISSKNLLLDLEYEAHV 724 (849)
Q Consensus 647 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~--ivH~dlk~~Nill~~~~~~kl 724 (849)
......++||||++ |+|.+++........+++.++..++.||+.||+|||+. + |+||||||+||+++.++.+||
T Consensus 104 ~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl 179 (337)
T 3ll6_A 104 TGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKL 179 (337)
T ss_dssp TSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEB
T ss_pred cCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEE
Confidence 33446899999996 69999987644445699999999999999999999998 7 999999999999999999999
Q ss_pred eeecCCcccCCCCCC------------eeeccCCccccccccc---cCCCCCccchHHHHHHHHHHHHhCCCCCCccccc
Q 042123 725 ADFGIAKSLKPDSSN------------WTEFAGTCGYIAPELA---YTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSI 789 (849)
Q Consensus 725 ~DfG~a~~~~~~~~~------------~~~~~g~~~y~aPE~~---~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~ 789 (849)
+|||+++........ .....+|+.|+|||.+ .+..++.++||||||+++|||++|+.||......
T Consensus 180 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~ 259 (337)
T 3ll6_A 180 CDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL 259 (337)
T ss_dssp CCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC------
T ss_pred ecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH
Confidence 999999876543221 1134589999999998 5667899999999999999999999999743221
Q ss_pred cccccccccccccccCCCCCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 790 SSSSLNTDVALDQMLDPRLPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
. ....... .+...... ..+.+++.+||+.||++|||++|++++|+
T Consensus 260 ~--------~~~~~~~--~~~~~~~~----~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 304 (337)
T 3ll6_A 260 R--------IVNGKYS--IPPHDTQY----TVFHSLIRAMLQVNPEERLSIAEVVHQLQ 304 (337)
T ss_dssp --------------CC--CCTTCCSS----GGGHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred H--------hhcCccc--CCcccccc----hHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 1 0111111 11111111 12678899999999999999999999875
No 234
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.3e-34 Score=335.04 Aligned_cols=233 Identities=24% Similarity=0.413 Sum_probs=178.4
Q ss_pred eecCCccceEEEEEec---CCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeEEEEEecc
Q 042123 595 CIGNGGHASVYRAELP---SGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSFLLYEFLE 660 (849)
Q Consensus 595 ~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~lV~e~~~ 660 (849)
.||+|+||.||+|.+. ++..||||+++... .....+.+.+|+. ++++++.. +..++||||++
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~ 418 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT---EKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAG 418 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCC---SSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCT
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCC---ChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCC
Confidence 7999999999999653 46679999987542 2223456667755 35677765 56899999999
Q ss_pred CCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccCCCCCC-
Q 042123 661 RGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLKPDSSN- 739 (849)
Q Consensus 661 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~- 739 (849)
+|+|.+++.... ..+++.++..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 419 ~g~L~~~l~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 493 (613)
T 2ozo_A 419 GGPLHKFLVGKR--EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYY 493 (613)
T ss_dssp TCBHHHHHTTCT--TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC------
T ss_pred CCcHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCcee
Confidence 999999996543 4589999999999999999999999 9999999999999999999999999999876543221
Q ss_pred --eeeccCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCC-CCCCChhh
Q 042123 740 --WTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIK-GKHPRDFLSSISSSSLNTDVALDQMLDPR-LPAPSRSA 815 (849)
Q Consensus 740 --~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 815 (849)
.....+++.|+|||++.+..++.++|||||||++|||++ |+.||...... .....+.... ...+...
T Consensus 494 ~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~--------~~~~~i~~~~~~~~p~~~- 564 (613)
T 2ozo_A 494 TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--------EVMAFIEQGKRMECPPEC- 564 (613)
T ss_dssp --------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH--------HHHHHHHTTCCCCCCTTC-
T ss_pred eeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH--------HHHHHHHcCCCCCCCCcC-
Confidence 122335678999999998999999999999999999998 99999754321 1111222221 2222222
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 816 QEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 816 ~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
...+.+++.+||+.||++|||+++|++.|+
T Consensus 565 ---~~~l~~li~~cl~~dP~~RPs~~~l~~~L~ 594 (613)
T 2ozo_A 565 ---PPELYALMSDCWIYKWEDRPDFLTVEQRMR 594 (613)
T ss_dssp ---CHHHHHHHHHTTCSSTTTSCCHHHHHHHHH
T ss_pred ---CHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 234888999999999999999999998874
No 235
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=2.3e-34 Score=313.62 Aligned_cols=246 Identities=19% Similarity=0.317 Sum_probs=187.9
Q ss_pred hcCCCcCceecCCccceEEEEEecCCcEEEEEEecccCCCCch-------------hhHHHHHHHHH-----------Hh
Q 042123 587 TNDFDAKYCIGNGGHASVYRAELPSGEVVAVKKFHSLLPCDQT-------------VDQKEFLTEVE-----------AF 642 (849)
Q Consensus 587 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~-------------~~~~~~~~ei~-----------~~ 642 (849)
.++|+..+.||+|+||.||+|.. +++.||||.+......... .....+.+|+. .+
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 36899999999999999999988 8999999998643211110 11145566654 36
Q ss_pred hceeecCCeeEEEEEeccCCChhhh------hcccccccCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeEecCCCCCCee
Q 042123 643 YGFCSHARHSFLLYEFLERGSLAAI------LNTDAAAQELGWSQRMNVIKAVAHALSYLHH-DCFPPIVHRDISSKNLL 715 (849)
Q Consensus 643 ~~~~~~~~~~~lV~e~~~~gsL~~~------l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~-~~~~~ivH~dlk~~Nil 715 (849)
++++.+.+..++||||+++|+|.++ +.... ...+++.++..++.|++.||+|||+ . +|+||||||+||+
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Nil 184 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNY-TCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNIL 184 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSS-CCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhcc-ccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhEE
Confidence 7888888999999999999999998 54321 3568999999999999999999999 7 9999999999999
Q ss_pred ecCCCcEEEeeecCCcccCCCCCCeeeccCCccccccccccCC-CCCc-cchHHHHHHHHHHHHhCCCCCCccccccccc
Q 042123 716 LDLEYEAHVADFGIAKSLKPDSSNWTEFAGTCGYIAPELAYTM-KITE-KCDVYSFGVLMWEVIKGKHPRDFLSSISSSS 793 (849)
Q Consensus 716 l~~~~~~kl~DfG~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~-~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~ 793 (849)
++.++.+||+|||.+...... ......+++.|+|||.+.+. .++. ++||||||+++|||++|+.||......
T Consensus 185 ~~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---- 258 (348)
T 2pml_X 185 MDKNGRVKLSDFGESEYMVDK--KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL---- 258 (348)
T ss_dssp ECTTSCEEECCCTTCEECBTT--EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS----
T ss_pred EcCCCcEEEeccccccccccc--cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH----
Confidence 999999999999999876433 33456789999999999877 6666 899999999999999999999744321
Q ss_pred cccccccccccCCCCCCCC---------------hhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 794 LNTDVALDQMLDPRLPAPS---------------RSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
......+.......+. .........+.+++.+||+.||++|||++|++++
T Consensus 259 ---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h 323 (348)
T 2pml_X 259 ---VELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH 323 (348)
T ss_dssp ---HHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred ---HHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0111111111111000 0001123358899999999999999999999986
No 236
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=2.1e-34 Score=305.38 Aligned_cols=241 Identities=25% Similarity=0.417 Sum_probs=182.9
Q ss_pred hcCCCcCc-eecCCccceEEEEEe---cCCcEEEEEEecccCCCCchhhHHHHHHHHHH-----------hhceeecCCe
Q 042123 587 TNDFDAKY-CIGNGGHASVYRAEL---PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVEA-----------FYGFCSHARH 651 (849)
Q Consensus 587 ~~~f~~~~-~lG~G~~g~Vy~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~~-----------~~~~~~~~~~ 651 (849)
.++|...+ .||+|+||.||+|.. .+++.||||.+..... .....+.+.+|+.. +++++ ..+.
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~ 91 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN--DPALKDELLAEANVMQQLDNPYIVRMIGIC-EAES 91 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-------CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSS
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeeccccc--CHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCC
Confidence 35677777 999999999999943 3478899999875422 22224456666553 56666 5567
Q ss_pred eEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCc
Q 042123 652 SFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAK 731 (849)
Q Consensus 652 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~ 731 (849)
.++||||+++++|.+++... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 92 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 165 (291)
T 1xbb_A 92 WMLVMEMAELGPLNKYLQQN---RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSK 165 (291)
T ss_dssp EEEEEECCTTEEHHHHHHHC---TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred cEEEEEeCCCCCHHHHHHhC---cCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCcce
Confidence 89999999999999999653 3489999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCC---eeeccCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCC
Q 042123 732 SLKPDSSN---WTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIK-GKHPRDFLSSISSSSLNTDVALDQMLDPR 807 (849)
Q Consensus 732 ~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 807 (849)
........ .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||...... .....+....
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--------~~~~~~~~~~ 237 (291)
T 1xbb_A 166 ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--------EVTAMLEKGE 237 (291)
T ss_dssp ECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--------HHHHHHHTTC
T ss_pred eeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH--------HHHHHHHcCC
Confidence 76544322 122345688999999998889999999999999999999 99999743321 1111111111
Q ss_pred -CCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 808 -LPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 808 -~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
...+.. ....+.+++.+||+.||++|||+.++++.|+
T Consensus 238 ~~~~~~~----~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~ 275 (291)
T 1xbb_A 238 RMGCPAG----CPREMYDLMNLCWTYDVENRPGFAAVELRLR 275 (291)
T ss_dssp CCCCCTT----CCHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred CCCCCCC----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 111111 1234888999999999999999999999874
No 237
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=3.9e-34 Score=303.21 Aligned_cols=238 Identities=21% Similarity=0.318 Sum_probs=180.9
Q ss_pred CCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHHHHH-----------hhceeec----CCee
Q 042123 589 DFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVEA-----------FYGFCSH----ARHS 652 (849)
Q Consensus 589 ~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~~-----------~~~~~~~----~~~~ 652 (849)
.|...+.||+|+||.||+|.. .++..||+|.+..... .......+.+|+.. +++++.. ....
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 104 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL--TKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCI 104 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhh--CHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceE
Confidence 467778899999999999955 5688999999875322 22334556666553 4444433 4568
Q ss_pred EEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCCeeec-CCCcEEEeeecC
Q 042123 653 FLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPP--IVHRDISSKNLLLD-LEYEAHVADFGI 729 (849)
Q Consensus 653 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~--ivH~dlk~~Nill~-~~~~~kl~DfG~ 729 (849)
++||||+++|+|.+++... ..+++.++..++.|++.||+|||+. + |+||||||+||+++ .++.+||+|||+
T Consensus 105 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~ 178 (290)
T 1t4h_A 105 VLVTELMTSGTLKTYLKRF---KVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGL 178 (290)
T ss_dssp EEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTG
T ss_pred EEEEEecCCCCHHHHHHHc---cCCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCCC
Confidence 9999999999999999653 3589999999999999999999998 7 99999999999997 789999999999
Q ss_pred CcccCCCCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCC
Q 042123 730 AKSLKPDSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLP 809 (849)
Q Consensus 730 a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 (849)
+..... .......|++.|+|||.+.+ .++.++||||+|+++|+|++|+.||...... ............+
T Consensus 179 ~~~~~~--~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-------~~~~~~~~~~~~~ 248 (290)
T 1t4h_A 179 ATLKRA--SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNA-------AQIYRRVTSGVKP 248 (290)
T ss_dssp GGGCCT--TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH-------HHHHHHHTTTCCC
T ss_pred cccccc--cccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcH-------HHHHHHHhccCCc
Confidence 976543 23455679999999998764 5899999999999999999999999743221 1111111111111
Q ss_pred CCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 810 APSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 810 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
..........+.+++.+||+.||++|||++|++++
T Consensus 249 --~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 249 --ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp --GGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred --cccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 11111112348899999999999999999999986
No 238
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=9.6e-35 Score=312.78 Aligned_cols=246 Identities=22% Similarity=0.273 Sum_probs=180.6
Q ss_pred HhcCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCC----CchhhHHHHHHHHH-----------HhhceeecC
Q 042123 586 ATNDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPC----DQTVDQKEFLTEVE-----------AFYGFCSHA 649 (849)
Q Consensus 586 ~~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~----~~~~~~~~~~~ei~-----------~~~~~~~~~ 649 (849)
..++|...+.||+|+||.||+|.. .+++.||||.+...... ........+.+|+. .+++++...
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 346899999999999999999965 46899999998653211 01111122344433 356666554
Q ss_pred CeeEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCc---EEEee
Q 042123 650 RHSFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYE---AHVAD 726 (849)
Q Consensus 650 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~---~kl~D 726 (849)
..++||||+++|+|.+++... ..+++.++..++.||+.||+|||+. +|+||||||+||+++.++. +||+|
T Consensus 88 -~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~D 160 (322)
T 2ycf_A 88 -DYYIVLELMEGGELFDKVVGN---KRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITD 160 (322)
T ss_dssp -SEEEEEECCTTEETHHHHSTT---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEECC
T ss_pred -ceEEEEecCCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEcc
Confidence 489999999999999998653 3589999999999999999999999 9999999999999987654 99999
Q ss_pred ecCCcccCCCCCCeeeccCCcccccccccc---CCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccc
Q 042123 727 FGIAKSLKPDSSNWTEFAGTCGYIAPELAY---TMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQM 803 (849)
Q Consensus 727 fG~a~~~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~ 803 (849)
||+++..... .......||+.|+|||++. ...++.++||||||+++|+|++|+.||....... .....+
T Consensus 161 fg~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-------~~~~~~ 232 (322)
T 2ycf_A 161 FGHSKILGET-SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV-------SLKDQI 232 (322)
T ss_dssp CTTCEECCCC-HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS-------CHHHHH
T ss_pred Cccceecccc-cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH-------HHHHHH
Confidence 9999876432 1223456899999999874 5678899999999999999999999997432110 011111
Q ss_pred cCCCCCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 804 LDPRLPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 804 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
..................+.+++.+||+.||++|||+++++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h 275 (322)
T 2ycf_A 233 TSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 275 (322)
T ss_dssp HHTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HhCccccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhC
Confidence 1122221111112233458899999999999999999999876
No 239
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=3.3e-34 Score=306.16 Aligned_cols=243 Identities=18% Similarity=0.261 Sum_probs=182.2
Q ss_pred hcCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHHHHH-----------hhcee--ecCCee
Q 042123 587 TNDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVEA-----------FYGFC--SHARHS 652 (849)
Q Consensus 587 ~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~~-----------~~~~~--~~~~~~ 652 (849)
.++|++.+.||+|+||.||+|.. .+++.||||.+..............+.+|+.. +++++ .+....
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 47899999999999999999966 46899999998653211112234556666553 55665 345678
Q ss_pred EEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcc
Q 042123 653 FLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKS 732 (849)
Q Consensus 653 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~ 732 (849)
++||||+++| +.+++.... ...+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||.+..
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~ 158 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVP-EKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEA 158 (305)
T ss_dssp EEEEECCSEE-HHHHHHHST-TCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEehhccCC-HHHHHHhCc-ccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeeccccccc
Confidence 9999999986 777765433 34689999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCC--CCeeeccCCccccccccccCCC--CCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCC
Q 042123 733 LKPDS--SNWTEFAGTCGYIAPELAYTMK--ITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRL 808 (849)
Q Consensus 733 ~~~~~--~~~~~~~g~~~y~aPE~~~~~~--~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 808 (849)
..... .......|++.|+|||.+.+.. ++.++||||+|+++|||++|+.||...... .....+.....
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--------~~~~~i~~~~~ 230 (305)
T 2wtk_C 159 LHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIY--------KLFENIGKGSY 230 (305)
T ss_dssp CCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHH--------HHHHHHHHCCC
T ss_pred cCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHH--------HHHHHHhcCCC
Confidence 65322 2234456899999999987644 377999999999999999999999743211 11111112222
Q ss_pred CCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 809 PAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 809 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
..+.... ..+.+++.+||+.||++|||++|++++
T Consensus 231 ~~~~~~~----~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 231 AIPGDCG----PPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp CCCSSSC----HHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred CCCCccC----HHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 2222222 247789999999999999999999976
No 240
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=1.4e-34 Score=312.15 Aligned_cols=245 Identities=26% Similarity=0.431 Sum_probs=184.1
Q ss_pred hcCCCcCceecCCccceEEEEEe------cCCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecC
Q 042123 587 TNDFDAKYCIGNGGHASVYRAEL------PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHA 649 (849)
Q Consensus 587 ~~~f~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~ 649 (849)
.++|+..+.||+|+||.||+|++ .+++.||||.+.... .......+.+|+. .+++++...
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 105 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC---SEQDELDFLMEALIISKFNHQNIVRCIGVSLQS 105 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSC---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEecccc---chhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCC
Confidence 36899999999999999999974 357789999986432 2233445666654 367788888
Q ss_pred CeeEEEEEeccCCChhhhhccccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCC---CcE
Q 042123 650 RHSFLLYEFLERGSLAAILNTDAA----AQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLE---YEA 722 (849)
Q Consensus 650 ~~~~lV~e~~~~gsL~~~l~~~~~----~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~---~~~ 722 (849)
...++||||+++|+|.+++..... ...+++.+++.++.|++.||+|||+. +|+||||||+||+++.+ ..+
T Consensus 106 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~ 182 (327)
T 2yfx_A 106 LPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVA 182 (327)
T ss_dssp SSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCE
T ss_pred CCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceE
Confidence 889999999999999999975431 13589999999999999999999999 99999999999999854 469
Q ss_pred EEeeecCCcccCCCC--CCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccccccccccc
Q 042123 723 HVADFGIAKSLKPDS--SNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIK-GKHPRDFLSSISSSSLNTDVA 799 (849)
Q Consensus 723 kl~DfG~a~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~t-g~~Pf~~~~~~~~~~~~~~~~ 799 (849)
||+|||+++...... .......+++.|+|||.+.+..++.++||||||+++|||++ |+.||...... ..
T Consensus 183 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--------~~ 254 (327)
T 2yfx_A 183 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ--------EV 254 (327)
T ss_dssp EECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--------HH
T ss_pred EECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH--------HH
Confidence 999999987553322 12234567889999999998899999999999999999998 99998743211 11
Q ss_pred cccccCCCCCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 800 LDQMLDPRLPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
...+........... ....+.+++.+||+.||++|||+.+++++|+
T Consensus 255 ~~~~~~~~~~~~~~~---~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~ 300 (327)
T 2yfx_A 255 LEFVTSGGRMDPPKN---CPGPVYRIMTQCWQHQPEDRPNFAIILERIE 300 (327)
T ss_dssp HHHHHTTCCCCCCTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHhcCCCCCCCCC---CCHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 111111111111111 1234788999999999999999999999875
No 241
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=2.1e-33 Score=303.53 Aligned_cols=290 Identities=22% Similarity=0.287 Sum_probs=250.7
Q ss_pred CCCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEEcCCCcccccCCcCCCCCCCCCEEEc
Q 042123 108 KFLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLNDNQLIGYIPRPFSNLTSVSTLRL 187 (849)
Q Consensus 108 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 187 (849)
.+++.+++++|.++. +|..+. ++|+.|+|++|.+++..+..|.++++|++|+|++|+++++.|.+|.++++|++|+|
T Consensus 33 c~l~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 109 (332)
T 2ft3_A 33 CHLRVVQCSDLGLKA-VPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYI 109 (332)
T ss_dssp EETTEEECCSSCCSS-CCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEEC
T ss_pred ccCCEEECCCCCccc-cCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEEC
Confidence 479999999999994 555553 68999999999999888889999999999999999999999999999999999999
Q ss_pred cCCCCcCcCcccccCCCCCCEEeccCCcCccCCCcCccCccccchhhhccccccCCCCcchhhhhhhhhhccCcCCCCCC
Q 042123 188 SRNDLFGSIPDEIGKMRSLSVLDLNQNQFKGVLPPSISNLTNLKELALLYNHLSGSIPPSLGNLILRQLLLSGNHFTGYL 267 (849)
Q Consensus 188 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~L~~n~i~~~~ 267 (849)
++|+++ .+|..+. ++|++|++++|+++.+.+..|.++++|++|++++|.++.. +..
T Consensus 110 ~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~---------------------~~~ 165 (332)
T 2ft3_A 110 SKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENS---------------------GFE 165 (332)
T ss_dssp CSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGG---------------------GSC
T ss_pred CCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccC---------------------CCC
Confidence 999998 5565554 8999999999999987777899999999999999988520 123
Q ss_pred CcccCCCCCcceeeecccccccccCCCCCCcccccEEEccCccccCchhhhhCCCCCCCEEeccCccccCcccccCCCCC
Q 042123 268 PYNICRGGALEIFTVSENHFQGTIPTSLRNCTSLIRVRLNGNNLTGNISEALGIYPNLTFIDLSRNNFYGEISSNWGKFP 347 (849)
Q Consensus 268 ~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 347 (849)
+..+..+ +|+.|++++|++++ +|..+. ++|+.|++++|.+++..+..+..+++|+.|+|++|++.+..+..|..++
T Consensus 166 ~~~~~~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 241 (332)
T 2ft3_A 166 PGAFDGL-KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLP 241 (332)
T ss_dssp TTSSCSC-CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCT
T ss_pred cccccCC-ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCC
Confidence 3444455 77888888888875 455443 7899999999999999989999999999999999999988888999999
Q ss_pred CCcEEeccCCccccCCCCCccccccccccccccccccccCchhhcCC------CCCcEEEccCcccc--ccCcccccccc
Q 042123 348 KLGTLNVSMNNITGGLPREIGNSSQLQAFDLSLNHIVGEIPKELGKL------NPLTKLILRGNQIT--GRLPKEIGSLT 419 (849)
Q Consensus 348 ~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l------~~L~~L~L~~N~l~--~~~p~~~~~l~ 419 (849)
+|++|++++|.++ .+|..+..+++|+.|++++|++++..+..|... ++|+.|++++|++. +..|..|..++
T Consensus 242 ~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~ 320 (332)
T 2ft3_A 242 TLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVT 320 (332)
T ss_dssp TCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBC
T ss_pred CCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccc
Confidence 9999999999999 788899999999999999999998877777654 67999999999998 67889999999
Q ss_pred cccccccccC
Q 042123 420 KLEYLDFSAI 429 (849)
Q Consensus 420 ~L~~L~l~~l 429 (849)
+|+.+++++.
T Consensus 321 ~L~~l~l~~n 330 (332)
T 2ft3_A 321 DRLAIQFGNY 330 (332)
T ss_dssp CSTTEEC---
T ss_pred hhhhhhcccc
Confidence 9999998753
No 242
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=5e-34 Score=314.62 Aligned_cols=195 Identities=19% Similarity=0.234 Sum_probs=153.8
Q ss_pred HhcCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCc-hhhHHHHHHHH-----------HHhhceeecCCee
Q 042123 586 ATNDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQ-TVDQKEFLTEV-----------EAFYGFCSHARHS 652 (849)
Q Consensus 586 ~~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~-~~~~~~~~~ei-----------~~~~~~~~~~~~~ 652 (849)
..++|+..+.||+|+||+||+|.. .+++.||||++........ ...+...++.+ ..+.+++...+..
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 131 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHL 131 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEE
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCce
Confidence 357899999999999999999965 4688999999864311000 00111122222 1245667778899
Q ss_pred EEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeec--CCCcEEEeeecCC
Q 042123 653 FLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLD--LEYEAHVADFGIA 730 (849)
Q Consensus 653 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~--~~~~~kl~DfG~a 730 (849)
++||||++ |+|.+++.... ...+++.++..++.|++.||+|||+. ..+|+||||||+||+++ .++.+||+|||++
T Consensus 132 ~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a 208 (382)
T 2vx3_A 132 CLVFEMLS-YNLYDLLRNTN-FRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGSS 208 (382)
T ss_dssp EEEEECCC-CBHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred EEEEecCC-CCHHHHHhhcC-cCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEeccCc
Confidence 99999996 49999987543 23589999999999999999999952 11899999999999995 4688999999999
Q ss_pred cccCCCCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCcc
Q 042123 731 KSLKPDSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFL 786 (849)
Q Consensus 731 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~ 786 (849)
+..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 209 ~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 209 CQLGQR---IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp EETTCC---CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred eecccc---cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 876432 23467899999999999999999999999999999999999999753
No 243
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=1e-34 Score=317.76 Aligned_cols=247 Identities=23% Similarity=0.360 Sum_probs=186.1
Q ss_pred cCCCcCceecCCccceEEEEEec-CCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeEEE
Q 042123 588 NDFDAKYCIGNGGHASVYRAELP-SGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSFLL 655 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~lV 655 (849)
++|+..+.||+|+||.||+|... +++.||+|++.... .......+.+|+. .+++++...+..++|
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 109 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI---KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC 109 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC---CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEecccc---CHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEE
Confidence 57889999999999999999654 78999999987542 2233455666655 367778888899999
Q ss_pred EEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccCC
Q 042123 656 YEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLKP 735 (849)
Q Consensus 656 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~~ 735 (849)
|||+++|+|.+++... ..+++..+..++.|++.||+|||+.. +|+||||||+||+++.++.+||+|||++.....
T Consensus 110 ~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 184 (360)
T 3eqc_A 110 MEHMDGGSLDQVLKKA---GRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 184 (360)
T ss_dssp ECCCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHH
T ss_pred EECCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCccccc
Confidence 9999999999999653 35899999999999999999999842 799999999999999999999999999875532
Q ss_pred CCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccc----------------------
Q 042123 736 DSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSS---------------------- 793 (849)
Q Consensus 736 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~---------------------- 793 (849)
. ......||+.|+|||++.+..++.++||||||+++|+|++|+.||..........
T Consensus 185 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (360)
T 3eqc_A 185 S--MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGR 262 (360)
T ss_dssp H--C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC-------------------
T ss_pred c--cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCC
Confidence 2 2234578999999999999999999999999999999999999997433111000
Q ss_pred ------------cccccccccccCCCCCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 794 ------------LNTDVALDQMLDPRLPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 794 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
...............+... .......+.+++.+||+.||++|||++|+++|
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 325 (360)
T 3eqc_A 263 PLNKFGMDSRPPMAIFELLDYIVNEPPPKLP--SGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 325 (360)
T ss_dssp -----------CCCHHHHHHHHHHSCCCCCC--TTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred cccccccCCCCcccchhhhhHHhccCCCCCC--cccccHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 0000000001111111000 00112348899999999999999999999986
No 244
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=2.9e-34 Score=324.51 Aligned_cols=183 Identities=24% Similarity=0.373 Sum_probs=137.7
Q ss_pred cCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHHHHH-----------hhceee-----cCC
Q 042123 588 NDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVEA-----------FYGFCS-----HAR 650 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~~-----------~~~~~~-----~~~ 650 (849)
++|++.+.||+|+||.||+|.. .+++.||||++.... ......+.+.+|+.. +++++. ...
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 130 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVF--EDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFD 130 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTT--SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhh--cCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCc
Confidence 6899999999999999999954 479999999986532 233344566667553 455552 235
Q ss_pred eeEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCC
Q 042123 651 HSFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIA 730 (849)
Q Consensus 651 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a 730 (849)
..|+||||++ |+|.+++... ..+++.++..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+|
T Consensus 131 ~~~lv~e~~~-~~L~~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla 203 (458)
T 3rp9_A 131 ELYVVLEIAD-SDFKKLFRTP---VYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLA 203 (458)
T ss_dssp CEEEEECCCS-EEHHHHHHSS---CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred eEEEEEeccc-cchhhhcccC---CCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccc
Confidence 7899999985 6899988643 3589999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCC---------------------------CCeeeccCCccccccccc-cCCCCCccchHHHHHHHHHHHHhC
Q 042123 731 KSLKPDS---------------------------SNWTEFAGTCGYIAPELA-YTMKITEKCDVYSFGVLMWEVIKG 779 (849)
Q Consensus 731 ~~~~~~~---------------------------~~~~~~~g~~~y~aPE~~-~~~~~~~~~Dv~SlGvil~el~tg 779 (849)
+...... ......+||+.|+|||++ .+..++.++|||||||++|||++|
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 204 RTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp BCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred hhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 8764321 123445789999999976 566799999999999999999994
No 245
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=8.3e-35 Score=308.41 Aligned_cols=244 Identities=24% Similarity=0.377 Sum_probs=172.3
Q ss_pred hcCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHH------------HHHhhceeecCCeeE
Q 042123 587 TNDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTE------------VEAFYGFCSHARHSF 653 (849)
Q Consensus 587 ~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e------------i~~~~~~~~~~~~~~ 653 (849)
.++|+..+.||+|+||+||+|+. .+++.||||++..... .....+...+ +..+++++.+.+..+
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~ 82 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVN---SQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVW 82 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---C---HHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccC---cHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEE
Confidence 46889999999999999999965 5799999999865421 1122222222 223677888888999
Q ss_pred EEEEeccCCChhhhhccc-ccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcc
Q 042123 654 LLYEFLERGSLAAILNTD-AAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKS 732 (849)
Q Consensus 654 lV~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~ 732 (849)
+||||+++ +|.+++... .....+++.++..++.|++.||+|||+.. +|+||||||+||+++.++.+||+|||+++.
T Consensus 83 lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 159 (290)
T 3fme_A 83 ICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGY 159 (290)
T ss_dssp EEEECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC-----
T ss_pred EEEehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCccc
Confidence 99999985 888877542 22346999999999999999999999853 899999999999999999999999999987
Q ss_pred cCCCCCCeeeccCCccccccccc----cCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCC
Q 042123 733 LKPDSSNWTEFAGTCGYIAPELA----YTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRL 808 (849)
Q Consensus 733 ~~~~~~~~~~~~g~~~y~aPE~~----~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 808 (849)
..... ......||+.|+|||.+ .+..++.++||||+|+++|||++|+.||...... ............
T Consensus 160 ~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-------~~~~~~~~~~~~ 231 (290)
T 3fme_A 160 LVDDV-AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP-------FQQLKQVVEEPS 231 (290)
T ss_dssp -----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCH-------HHHHHHHHHSCC
T ss_pred ccccc-cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCch-------HHHHHHHhccCC
Confidence 65432 23345789999999995 5667899999999999999999999999742211 111111111111
Q ss_pred CCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 809 PAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 809 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
+... .......+.+++.+||+.||++|||++|++++
T Consensus 232 ~~~~--~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~h 267 (290)
T 3fme_A 232 PQLP--ADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 267 (290)
T ss_dssp CCCC--TTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CCcc--cccCCHHHHHHHHHHhhcChhhCcCHHHHHhC
Confidence 1110 01112347889999999999999999999875
No 246
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=1.9e-34 Score=314.49 Aligned_cols=251 Identities=20% Similarity=0.290 Sum_probs=180.2
Q ss_pred cCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHHHH-----------Hhhceeec-------
Q 042123 588 NDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSH------- 648 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~------- 648 (849)
++|+..+.||+|+||.||+|+. .+|+.||||++....... .....+.+|+. .+++++..
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 94 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKE--GFPITALREIKILQLLKHENVVNLIEICRTKASPYNR 94 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSS--SSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccc--cchHHHHHHHHHHHhccCCCcccHhheeecccccccc
Confidence 6899999999999999999966 579999999986543222 11223444443 35555544
Q ss_pred -CCeeEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeee
Q 042123 649 -ARHSFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADF 727 (849)
Q Consensus 649 -~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 727 (849)
.+..++||||+++ ++.+.+.... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 95 ~~~~~~lv~e~~~~-~l~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Df 168 (351)
T 3mi9_A 95 CKGSIYLVFDFCEH-DLAGLLSNVL--VKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADF 168 (351)
T ss_dssp --CEEEEEEECCSE-EHHHHHHCTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred CCceEEEEEeccCC-CHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccc
Confidence 4568999999986 7777765433 3589999999999999999999999 9999999999999999999999999
Q ss_pred cCCcccCCC----CCCeeeccCCccccccccccC-CCCCccchHHHHHHHHHHHHhCCCCCCccccccc-----------
Q 042123 728 GIAKSLKPD----SSNWTEFAGTCGYIAPELAYT-MKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISS----------- 791 (849)
Q Consensus 728 G~a~~~~~~----~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~----------- 791 (849)
|+++.+... ........||+.|+|||.+.+ ..++.++||||+||++|||++|+.||........
T Consensus 169 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~ 248 (351)
T 3mi9_A 169 GLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSI 248 (351)
T ss_dssp TTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCC
T ss_pred hhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCC
Confidence 999876432 122345678999999998876 4579999999999999999999999975332100
Q ss_pred -cccccccccccccC-CCC-CCCChhhHHH------HHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 792 -SSLNTDVALDQMLD-PRL-PAPSRSAQEK------LISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 792 -~~~~~~~~~~~~~~-~~~-~~~~~~~~~~------~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
.............+ ... ........+. ...+.+++.+||+.||++|||++|+++|
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 249 TPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp CTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 00000000000000 000 0000001111 2347899999999999999999999986
No 247
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=5.9e-34 Score=309.13 Aligned_cols=246 Identities=18% Similarity=0.268 Sum_probs=182.9
Q ss_pred cCCCcCceecCCccceEEEEEe--cCCcEEEEEEecccCCCCchhhHHHHHHHH-----------------HHhhceeec
Q 042123 588 NDFDAKYCIGNGGHASVYRAEL--PSGEVVAVKKFHSLLPCDQTVDQKEFLTEV-----------------EAFYGFCSH 648 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~~ei-----------------~~~~~~~~~ 648 (849)
++|++.+.||+|+||.||+|.. .+++.||||++.... .....+.+|+ ..+++++..
T Consensus 14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~ 88 (339)
T 1z57_A 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-----RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEH 88 (339)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-----HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEE
T ss_pred CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-----chhHHHHHHHHHHHHhhhcCCCCceeeEeeeccccc
Confidence 6899999999999999999965 368899999986431 1122233332 235667778
Q ss_pred CCeeEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecC----------
Q 042123 649 ARHSFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDL---------- 718 (849)
Q Consensus 649 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~---------- 718 (849)
.+..++||||+ +++|.+++.... ...+++.++..++.|++.||+|||+. +|+||||||+||+++.
T Consensus 89 ~~~~~lv~e~~-~~~l~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~ 163 (339)
T 1z57_A 89 HGHICIVFELL-GLSTYDFIKENG-FLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPK 163 (339)
T ss_dssp TTEEEEEEECC-CCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC--
T ss_pred CCcEEEEEcCC-CCCHHHHHHhcC-CCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCc
Confidence 88999999999 889999986543 23589999999999999999999999 9999999999999987
Q ss_pred ---------CCcEEEeeecCCcccCCCCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccc
Q 042123 719 ---------EYEAHVADFGIAKSLKPDSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSI 789 (849)
Q Consensus 719 ---------~~~~kl~DfG~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~ 789 (849)
++.+||+|||+++..... .....||+.|+|||.+.+..++.++||||||+++|||++|+.||......
T Consensus 164 ~~~~~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~ 240 (339)
T 1z57_A 164 IKRDERTLINPDIKVVDFGSATYDDEH---HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSK 240 (339)
T ss_dssp --CEEEEESCCCEEECCCSSCEETTSC---CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHH
T ss_pred cccccccccCCCceEeeCcccccCccc---cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChH
Confidence 668999999999865432 23467899999999999999999999999999999999999999753321
Q ss_pred ccccc-------ccccccc-----cc-----cC---------------CCCCCCChhhHHHHHHHHHHHhhccCCCCCCC
Q 042123 790 SSSSL-------NTDVALD-----QM-----LD---------------PRLPAPSRSAQEKLISIMEVAFSCFNESPESR 837 (849)
Q Consensus 790 ~~~~~-------~~~~~~~-----~~-----~~---------------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 837 (849)
..... ....... .. .+ ................+.+++.+||+.||++|
T Consensus 241 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R 320 (339)
T 1z57_A 241 EHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKR 320 (339)
T ss_dssp HHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTS
T ss_pred HHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccc
Confidence 10000 0000000 00 00 00000000111234568899999999999999
Q ss_pred CCHHHHHhh
Q 042123 838 PTMKIISQQ 846 (849)
Q Consensus 838 Pt~~eil~~ 846 (849)
||++|++++
T Consensus 321 pt~~ell~h 329 (339)
T 1z57_A 321 ITLREALKH 329 (339)
T ss_dssp CCHHHHTTS
T ss_pred cCHHHHhcC
Confidence 999999876
No 248
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.1e-34 Score=315.10 Aligned_cols=247 Identities=21% Similarity=0.298 Sum_probs=177.1
Q ss_pred hcCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHHHHH-----------hhceeecC-----
Q 042123 587 TNDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVEA-----------FYGFCSHA----- 649 (849)
Q Consensus 587 ~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~~-----------~~~~~~~~----- 649 (849)
.++|+..+.||+|+||.||+|.. .+|+.||||++.... ......+.+.+|+.. +++++...
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~ 101 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPF--QSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDD 101 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTT--SSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTT
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccc--cCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCcccc
Confidence 36799999999999999999965 579999999986532 222334455666553 45555543
Q ss_pred -CeeEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeec
Q 042123 650 -RHSFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFG 728 (849)
Q Consensus 650 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG 728 (849)
...|+||||+ +++|.+++.. ..+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 102 ~~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg 173 (367)
T 1cm8_A 102 FTDFYLVMPFM-GTDLGKLMKH----EKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFG 173 (367)
T ss_dssp CCCCEEEEECC-SEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCT
T ss_pred CceEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeee
Confidence 3469999999 7899999864 3489999999999999999999999 99999999999999999999999999
Q ss_pred CCcccCCCCCCeeeccCCccccccccccC-CCCCccchHHHHHHHHHHHHhCCCCCCcccccccc-------cccccccc
Q 042123 729 IAKSLKPDSSNWTEFAGTCGYIAPELAYT-MKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSS-------SLNTDVAL 800 (849)
Q Consensus 729 ~a~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~-------~~~~~~~~ 800 (849)
+++..... .....+|+.|+|||.+.+ ..++.++||||+||++|||++|+.||......... ........
T Consensus 174 ~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~ 250 (367)
T 1cm8_A 174 LARQADSE---MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFV 250 (367)
T ss_dssp TCEECCSS---CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHH
T ss_pred cccccccc---cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHH
Confidence 99876432 344678999999999877 67899999999999999999999999754321100 00000000
Q ss_pred c--------cccC--CCCCC-C-ChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 801 D--------QMLD--PRLPA-P-SRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 801 ~--------~~~~--~~~~~-~-~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
. ..+. +.... . ..........+.+++.+||+.||++|||++|+++|
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 251 QRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp HTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence 0 0000 00000 0 00001122347889999999999999999999986
No 249
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=8.4e-35 Score=306.31 Aligned_cols=236 Identities=25% Similarity=0.433 Sum_probs=176.7
Q ss_pred hcCCCcCceecCCccceEEEEEecCCcEEEEEEecccCCCCchhhHHHHHHHHH-----------Hhhceeec-CCeeEE
Q 042123 587 TNDFDAKYCIGNGGHASVYRAELPSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSH-ARHSFL 654 (849)
Q Consensus 587 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~-~~~~~l 654 (849)
.++|+..+.||+|+||.||+|+.. |+.||||.+.... ..+.+.+|+. .+++++.. .+..++
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~------~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~l 92 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA------TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI 92 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC--------HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEE
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh------HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEE
Confidence 367889999999999999999874 8899999986532 2334555544 24555433 457899
Q ss_pred EEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccC
Q 042123 655 LYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLK 734 (849)
Q Consensus 655 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~ 734 (849)
||||+++|+|.+++.... ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 93 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~ 168 (278)
T 1byg_A 93 VTEYMAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 168 (278)
T ss_dssp EECCCTTEEHHHHHHHHH-HHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC-----
T ss_pred EEecCCCCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeecccccccc
Confidence 999999999999996543 23489999999999999999999999 99999999999999999999999999988654
Q ss_pred CCCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCC-CCCCCC
Q 042123 735 PDSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIK-GKHPRDFLSSISSSSLNTDVALDQMLDP-RLPAPS 812 (849)
Q Consensus 735 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 812 (849)
.. .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||...... .....+... ....+.
T Consensus 169 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~--------~~~~~~~~~~~~~~~~ 237 (278)
T 1byg_A 169 ST---QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--------DVVPRVEKGYKMDAPD 237 (278)
T ss_dssp ----------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG--------GHHHHHTTTCCCCCCT
T ss_pred cc---ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHhcCCCCCCcc
Confidence 32 223467889999999998899999999999999999998 99998743211 111111111 111111
Q ss_pred hhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 813 RSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 813 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
.. ...+.+++.+||+.||++|||+.|+++.|+
T Consensus 238 ~~----~~~l~~li~~~l~~~p~~Rps~~~l~~~L~ 269 (278)
T 1byg_A 238 GC----PPAVYEVMKNCWHLDAAMRPSFLQLREQLE 269 (278)
T ss_dssp TC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred cC----CHHHHHHHHHHhcCChhhCCCHHHHHHHHH
Confidence 11 234788999999999999999999998874
No 250
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=5.6e-35 Score=311.70 Aligned_cols=242 Identities=23% Similarity=0.393 Sum_probs=180.4
Q ss_pred hcCCCcCceecCCccceEEEEEec-CCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeEE
Q 042123 587 TNDFDAKYCIGNGGHASVYRAELP-SGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSFL 654 (849)
Q Consensus 587 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~l 654 (849)
.+.|++.+.||+|+||.||+|+.. +++.||+|.+..... .....+.+|+. .+++++...+..++
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 93 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSE----EELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWI 93 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC--------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEE
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCH----HHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEE
Confidence 368899999999999999999664 689999999865422 22344555543 36777888889999
Q ss_pred EEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccC
Q 042123 655 LYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLK 734 (849)
Q Consensus 655 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~ 734 (849)
||||+++++|.+++.... ..+++.++..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++....
T Consensus 94 v~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 168 (302)
T 2j7t_A 94 MIEFCPGGAVDAIMLELD--RGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNL 168 (302)
T ss_dssp EEECCTTEEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHH
T ss_pred EEEeCCCCcHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCcccc
Confidence 999999999999986432 4589999999999999999999999 99999999999999999999999999875432
Q ss_pred CCCCCeeeccCCccccccccc-----cCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCC
Q 042123 735 PDSSNWTEFAGTCGYIAPELA-----YTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLP 809 (849)
Q Consensus 735 ~~~~~~~~~~g~~~y~aPE~~-----~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 (849)
..........|++.|+|||.+ .+..++.++||||||+++|+|++|+.||....... ..........+
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--------~~~~~~~~~~~ 240 (302)
T 2j7t_A 169 KTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR--------VLLKIAKSDPP 240 (302)
T ss_dssp HHHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--------HHHHHHHSCCC
T ss_pred ccccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHH--------HHHHHhccCCc
Confidence 211122345789999999988 36678999999999999999999999997543211 11111111111
Q ss_pred CCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 810 APSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 810 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
. ..........+.+++.+||+.||++|||+++++++
T Consensus 241 ~-~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 276 (302)
T 2j7t_A 241 T-LLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEH 276 (302)
T ss_dssp C-CSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTS
T ss_pred c-cCCccccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 0 00111122347889999999999999999999876
No 251
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=6.1e-34 Score=312.43 Aligned_cols=247 Identities=20% Similarity=0.279 Sum_probs=175.1
Q ss_pred cCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHHHHH-----------hhceeecCC-----
Q 042123 588 NDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVEA-----------FYGFCSHAR----- 650 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~~-----------~~~~~~~~~----- 650 (849)
++|+..+.||+|+||.||+|.. .+++.||||++..... .......+.+|+.. +++++....
T Consensus 25 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 102 (371)
T 2xrw_A 25 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ--NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 102 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTS--SHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTC
T ss_pred hheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccC--ChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccc
Confidence 6899999999999999999954 5789999999875322 22334455566542 455554443
Q ss_pred -eeEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecC
Q 042123 651 -HSFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGI 729 (849)
Q Consensus 651 -~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~ 729 (849)
..++||||+++ +|.+++. ..+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 103 ~~~~lv~e~~~~-~l~~~~~-----~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 173 (371)
T 2xrw_A 103 QDVYIVMELMDA-NLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 173 (371)
T ss_dssp CEEEEEEECCSE-EHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred cceEEEEEcCCC-CHHHHHh-----hccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeec
Confidence 78999999985 7877774 2489999999999999999999999 999999999999999999999999999
Q ss_pred CcccCCCCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccc-------ccccc----
Q 042123 730 AKSLKPDSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSS-------LNTDV---- 798 (849)
Q Consensus 730 a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~-------~~~~~---- 798 (849)
++..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||...+...... .....
T Consensus 174 a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 252 (371)
T 2xrw_A 174 ARTAGTS-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKK 252 (371)
T ss_dssp -----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTT
T ss_pred ccccccc-cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHH
Confidence 9866432 22345678999999999999999999999999999999999999997543211000 00000
Q ss_pred ---c---------------cccccC-CCCCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 799 ---A---------------LDQMLD-PRLPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 799 ---~---------------~~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
. ...... ...+............+.+++.+||+.||++|||++|+++|
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 253 LQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp SCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred hhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 0 000000 00111111222335568899999999999999999999986
No 252
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.2e-34 Score=301.66 Aligned_cols=240 Identities=25% Similarity=0.414 Sum_probs=180.0
Q ss_pred CCCcCceecCCccceEEEEEec-C---CcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCe-e
Q 042123 589 DFDAKYCIGNGGHASVYRAELP-S---GEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARH-S 652 (849)
Q Consensus 589 ~f~~~~~lG~G~~g~Vy~~~~~-~---~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~-~ 652 (849)
.|...+.||+|+||+||+|.+. + +..||+|.+.... .....+.+.+|+. .+++++...+. .
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 98 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRIT---EMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLP 98 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCC---SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCC
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccc---cHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCc
Confidence 4555688999999999999653 2 2379999986532 2233445666654 35666655544 4
Q ss_pred EEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcc
Q 042123 653 FLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKS 732 (849)
Q Consensus 653 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~ 732 (849)
++||||+.+|+|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 99 ~~v~e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~ 173 (298)
T 3pls_A 99 HVLLPYMCHGDLLQFIRSPQ--RNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARD 173 (298)
T ss_dssp EEEECCCTTCBHHHHHHCTT--CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCT
T ss_pred EEEEecccCCCHHHHHhccc--cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCccc
Confidence 99999999999999996533 4589999999999999999999999 999999999999999999999999999986
Q ss_pred cCCCC----CCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCC-CccccccccccccccccccccCCC
Q 042123 733 LKPDS----SNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPR-DFLSSISSSSLNTDVALDQMLDPR 807 (849)
Q Consensus 733 ~~~~~----~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf-~~~~~~~~~~~~~~~~~~~~~~~~ 807 (849)
..... .......+++.|+|||.+.+..++.++||||||+++|+|++|..|+ ..... ...........
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~--------~~~~~~~~~~~ 245 (298)
T 3pls_A 174 ILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP--------FDLTHFLAQGR 245 (298)
T ss_dssp TTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCG--------GGHHHHHHTTC
T ss_pred ccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCH--------HHHHHHhhcCC
Confidence 54321 1223456788999999999999999999999999999999966554 32211 11111111111
Q ss_pred -CCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 808 -LPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 808 -~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
.+.+... ...+.+++.+||+.||++|||++++++.|+
T Consensus 246 ~~~~~~~~----~~~l~~li~~~l~~~p~~Rps~~~ll~~l~ 283 (298)
T 3pls_A 246 RLPQPEYC----PDSLYQVMQQCWEADPAVRPTFRVLVGEVE 283 (298)
T ss_dssp CCCCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCCccc----hHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 1111112 234788999999999999999999999874
No 253
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=1.3e-34 Score=314.28 Aligned_cols=244 Identities=23% Similarity=0.371 Sum_probs=183.8
Q ss_pred hcCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHHH------------HHhhceeecCCeeE
Q 042123 587 TNDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTEV------------EAFYGFCSHARHSF 653 (849)
Q Consensus 587 ~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~ei------------~~~~~~~~~~~~~~ 653 (849)
.++|+..+.||+|+||.||+|+. .+|+.||||++...... .....+..|. .++++++...+..+
T Consensus 50 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~ 126 (340)
T 3an0_A 50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNS---QEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVW 126 (340)
T ss_dssp SSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCC---HHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEE
T ss_pred hhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCc---HHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEE
Confidence 46788899999999999999965 57999999998754221 1223333332 23678888888999
Q ss_pred EEEEeccCCChhhhhcccc-cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcc
Q 042123 654 LLYEFLERGSLAAILNTDA-AAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKS 732 (849)
Q Consensus 654 lV~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~ 732 (849)
+||||+++ +|.+++.... ....+++.++..++.||+.||+|||+.. +|+||||||+||+++.++.+||+|||+++.
T Consensus 127 lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~ 203 (340)
T 3an0_A 127 ICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGY 203 (340)
T ss_dssp EEECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECCCSHHHH
T ss_pred EEHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeCCCcee
Confidence 99999986 9998886421 2346999999999999999999999743 899999999999999999999999999986
Q ss_pred cCCCCCCeeeccCCcccccccccc----CCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCC
Q 042123 733 LKPDSSNWTEFAGTCGYIAPELAY----TMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRL 808 (849)
Q Consensus 733 ~~~~~~~~~~~~g~~~y~aPE~~~----~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 808 (849)
.... .......||+.|+|||++. ...++.++|||||||++|||++|+.||...... .......+....
T Consensus 204 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~-------~~~~~~~~~~~~ 275 (340)
T 3an0_A 204 LVDS-VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP-------FQQLKQVVEEPS 275 (340)
T ss_dssp HSCH-HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCH-------HHHHHHHHHSCC
T ss_pred cccc-cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccch-------HHHHHHHhcCCC
Confidence 6432 1123357899999999964 447899999999999999999999999742211 111111111111
Q ss_pred CCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 809 PAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 809 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
+.... ......+.+++.+||+.||++|||+.|++++
T Consensus 276 ~~~~~--~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 311 (340)
T 3an0_A 276 PQLPA--DKFSAEFVDFTSQCLKKNSKERPTYPELMQH 311 (340)
T ss_dssp CCCCG--GGSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CCCCc--ccCCHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 11111 1122348889999999999999999999875
No 254
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=2.9e-34 Score=308.41 Aligned_cols=245 Identities=23% Similarity=0.372 Sum_probs=181.9
Q ss_pred cCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHHHH-----------Hhhceee----cCCe
Q 042123 588 NDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCS----HARH 651 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~----~~~~ 651 (849)
++|+..+.||+|+||.||+|+. .+++.||||++... .......+.+|+. ++++++. ....
T Consensus 29 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (317)
T 2buj_A 29 KHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH----EQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHE 104 (317)
T ss_dssp EEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEES----SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEE
T ss_pred eEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecC----CHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCce
Confidence 6899999999999999999965 67999999988542 2233445555654 3556664 3347
Q ss_pred eEEEEEeccCCChhhhhcccc-cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCC
Q 042123 652 SFLLYEFLERGSLAAILNTDA-AAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIA 730 (849)
Q Consensus 652 ~~lV~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a 730 (849)
.++||||+++|+|.+++.... ....+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+
T Consensus 105 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~ 181 (317)
T 2buj_A 105 AWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSM 181 (317)
T ss_dssp EEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSC
T ss_pred eEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcc
Confidence 899999999999999987532 234689999999999999999999999 9999999999999999999999999998
Q ss_pred cccCCCCCC---------eeeccCCccccccccccCCC---CCccchHHHHHHHHHHHHhCCCCCCcccccccccccccc
Q 042123 731 KSLKPDSSN---------WTEFAGTCGYIAPELAYTMK---ITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDV 798 (849)
Q Consensus 731 ~~~~~~~~~---------~~~~~g~~~y~aPE~~~~~~---~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~ 798 (849)
......... .....||+.|+|||.+.+.. ++.++||||||+++|||++|+.||....... .....
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~---~~~~~ 258 (317)
T 2buj_A 182 NQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKG---DSVAL 258 (317)
T ss_dssp EESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTT---SCHHH
T ss_pred hhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhccc---chhhH
Confidence 765321110 12235799999999987554 6889999999999999999999986321110 00000
Q ss_pred ccccccCCCCCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 799 ALDQMLDPRLPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
.... ....+..... ...+.+++.+||+.||++|||+++++++|+
T Consensus 259 ~~~~--~~~~~~~~~~----~~~l~~li~~~l~~dp~~Rps~~~ll~~L~ 302 (317)
T 2buj_A 259 AVQN--QLSIPQSPRH----SSALWQLLNSMMTVDPHQRPHIPLLLSQLE 302 (317)
T ss_dssp HHHC--C--CCCCTTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred Hhhc--cCCCCccccC----CHHHHHHHHHHhhcChhhCCCHHHHHHHhh
Confidence 0011 1111111112 234888999999999999999999999885
No 255
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=4.1e-34 Score=317.66 Aligned_cols=247 Identities=20% Similarity=0.253 Sum_probs=180.1
Q ss_pred cCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHHHH-------------------Hhhceee
Q 042123 588 NDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-------------------AFYGFCS 647 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-------------------~~~~~~~ 647 (849)
++|++.+.||+|+||+||+|+. .+++.||||++... ......+.+|+. .+++++.
T Consensus 37 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~ 111 (397)
T 1wak_A 37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-----EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFK 111 (397)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-----HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEE
T ss_pred CeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-----CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeeccee
Confidence 6899999999999999999954 57899999998642 112233333332 2344444
Q ss_pred ----cCCeeEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCC---
Q 042123 648 ----HARHSFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEY--- 720 (849)
Q Consensus 648 ----~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~--- 720 (849)
.....++||||+ ++++.+.+.... ...+++.++..++.||+.||+|||+++ +|+||||||+|||++.++
T Consensus 112 ~~~~~~~~~~lv~e~~-~~~l~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~ 187 (397)
T 1wak_A 112 ISGVNGTHICMVFEVL-GHHLLKWIIKSN-YQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYI 187 (397)
T ss_dssp EEETTEEEEEEEECCC-CCBHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHH
T ss_pred ecCCCCceEEEEEecc-CccHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhh
Confidence 456789999999 556666664332 245899999999999999999999964 799999999999999775
Q ss_pred ----------------------------------------------cEEEeeecCCcccCCCCCCeeeccCCcccccccc
Q 042123 721 ----------------------------------------------EAHVADFGIAKSLKPDSSNWTEFAGTCGYIAPEL 754 (849)
Q Consensus 721 ----------------------------------------------~~kl~DfG~a~~~~~~~~~~~~~~g~~~y~aPE~ 754 (849)
.+||+|||.++..... .....||+.|+|||+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~---~~~~~gt~~y~aPE~ 264 (397)
T 1wak_A 188 RRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH---FTEDIQTRQYRSLEV 264 (397)
T ss_dssp HHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC---SCSCCSCGGGCCHHH
T ss_pred hhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc---CccCCCCCcccCChh
Confidence 7999999999876432 244578999999999
Q ss_pred ccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccc-------------c------ccccccccCC--------C
Q 042123 755 AYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLN-------------T------DVALDQMLDP--------R 807 (849)
Q Consensus 755 ~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~-------------~------~~~~~~~~~~--------~ 807 (849)
+.+..++.++|||||||++|||++|+.||............ . .......... .
T Consensus 265 ~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (397)
T 1wak_A 265 LIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITK 344 (397)
T ss_dssp HHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCC
T ss_pred hcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccc
Confidence 99999999999999999999999999999743321110000 0 0000000000 0
Q ss_pred CCC---------CChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 808 LPA---------PSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 808 ~~~---------~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
... ...........+.+++.+||+.||++|||++|+++|
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 345 LKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp CCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred cCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 000 001224455678899999999999999999999986
No 256
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=2.1e-34 Score=315.45 Aligned_cols=259 Identities=17% Similarity=0.200 Sum_probs=171.6
Q ss_pred HHHHHHhcCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHH--------HHHhhceeecCC-
Q 042123 581 DEIVKATNDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTE--------VEAFYGFCSHAR- 650 (849)
Q Consensus 581 ~~~~~~~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e--------i~~~~~~~~~~~- 650 (849)
.......++|+..+.||+|+||.||+|+. .+++.||||++........ ......+. +..+++++....
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~--~~~~~~~~l~~l~h~niv~~~~~~~~~~~ 93 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRN--RELQIMQDLAVLHHPNIVQLQSYFYTLGE 93 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTCCC--HHHHHHHHHHHHCCTTBCCEEEEEEEECS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccH--HHHHHHHHHHhcCCCCcccHHHhhhcccc
Confidence 44566778999999999999999999966 4789999998865322211 11222222 224566664322
Q ss_pred ------eeEEEEEeccCCChhhhhcc-cccccCCCHHHHHHHHHHHHHHHHHHH--hcCCCCeEecCCCCCCeeecC-CC
Q 042123 651 ------HSFLLYEFLERGSLAAILNT-DAAAQELGWSQRMNVIKAVAHALSYLH--HDCFPPIVHRDISSKNLLLDL-EY 720 (849)
Q Consensus 651 ------~~~lV~e~~~~gsL~~~l~~-~~~~~~l~~~~~~~i~~~ia~~l~~LH--~~~~~~ivH~dlk~~Nill~~-~~ 720 (849)
..++||||+++ ++.+.+.. ......+++..+..++.|++.|++||| +. +|+||||||+||+++. ++
T Consensus 94 ~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~~ 169 (360)
T 3e3p_A 94 RDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEADG 169 (360)
T ss_dssp SCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTTT
T ss_pred ccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCCC
Confidence 37899999987 44444322 223346899999999999999999999 77 9999999999999997 89
Q ss_pred cEEEeeecCCcccCCCCCCeeeccCCccccccccccCCC-CCccchHHHHHHHHHHHHhCCCCCCcccccccccc-----
Q 042123 721 EAHVADFGIAKSLKPDSSNWTEFAGTCGYIAPELAYTMK-ITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSL----- 794 (849)
Q Consensus 721 ~~kl~DfG~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~----- 794 (849)
.+||+|||+++...... ......||+.|+|||++.+.. ++.++|||||||++|||++|+.||...........
T Consensus 170 ~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~ 248 (360)
T 3e3p_A 170 TLKLCDFGSAKKLSPSE-PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVL 248 (360)
T ss_dssp EEEECCCTTCBCCCTTS-CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHH
T ss_pred cEEEeeCCCceecCCCC-CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHc
Confidence 99999999998765433 234567899999999986654 89999999999999999999999975432110000
Q ss_pred --cccccccc---------ccCC-CCCC---CChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 795 --NTDVALDQ---------MLDP-RLPA---PSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 795 --~~~~~~~~---------~~~~-~~~~---~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
........ ..+. ..+. ...........+.+++.+||+.||++|||+.|+++|
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 315 (360)
T 3e3p_A 249 GCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315 (360)
T ss_dssp CCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 00000000 0000 0000 000000123458899999999999999999999986
No 257
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=7.8e-34 Score=304.41 Aligned_cols=240 Identities=22% Similarity=0.363 Sum_probs=178.4
Q ss_pred HhcCCCcCceecCCccceEEEEEecCCcEEEEEEecccCCCCchhhHHHHHHHHH-------------HhhceeecCCee
Q 042123 586 ATNDFDAKYCIGNGGHASVYRAELPSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-------------AFYGFCSHARHS 652 (849)
Q Consensus 586 ~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-------------~~~~~~~~~~~~ 652 (849)
..++|+..+.||+|+||.||+|...+++.||||++..... .......+.+|+. .+++++......
T Consensus 26 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~ 103 (313)
T 3cek_A 26 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA--DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYI 103 (313)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSC--CHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEE
T ss_pred ccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccc--cccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEE
Confidence 3467999999999999999999888899999999865322 1222333444433 256677788899
Q ss_pred EEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcc
Q 042123 653 FLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKS 732 (849)
Q Consensus 653 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~ 732 (849)
++||| +.+++|.+++... ..+++.++..++.|++.||+|||+. +|+||||||+||+++ ++.+||+|||+++.
T Consensus 104 ~lv~e-~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~ 175 (313)
T 3cek_A 104 YMVME-CGNIDLNSWLKKK---KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQ 175 (313)
T ss_dssp EEEEC-CCSEEHHHHHHHC---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCC
T ss_pred EEEEe-cCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEE-CCeEEEeecccccc
Confidence 99999 6678999998653 3589999999999999999999999 999999999999996 48999999999987
Q ss_pred cCCCCC--CeeeccCCccccccccccC-----------CCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccc
Q 042123 733 LKPDSS--NWTEFAGTCGYIAPELAYT-----------MKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVA 799 (849)
Q Consensus 733 ~~~~~~--~~~~~~g~~~y~aPE~~~~-----------~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~ 799 (849)
...... ......|++.|+|||.+.+ ..++.++||||||+++|||++|+.||...... ...
T Consensus 176 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~-------~~~ 248 (313)
T 3cek_A 176 MQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ-------ISK 248 (313)
T ss_dssp --------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSH-------HHH
T ss_pred ccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHH-------HHH
Confidence 654322 1234578999999999865 46888999999999999999999999743211 111
Q ss_pred cccccCCCCC--CCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 800 LDQMLDPRLP--APSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 800 ~~~~~~~~~~--~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
.....++... .+... ...+.+++.+||+.||++|||++|++++
T Consensus 249 ~~~~~~~~~~~~~~~~~----~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 249 LHAIIDPNHEIEFPDIP----EKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp HHHHHCTTSCCCCCCCS----CHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHHhcccccCCcccc----hHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 1222222211 11111 1247788999999999999999999976
No 258
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=5.4e-34 Score=306.37 Aligned_cols=236 Identities=23% Similarity=0.313 Sum_probs=184.9
Q ss_pred HHhcCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCC--------chhhHHHHHHH-------HHHhhceeec
Q 042123 585 KATNDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCD--------QTVDQKEFLTE-------VEAFYGFCSH 648 (849)
Q Consensus 585 ~~~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--------~~~~~~~~~~e-------i~~~~~~~~~ 648 (849)
...++|+..+.||+|+||.||+|.. .+++.||||.+....... ....+...++. +..+++++..
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~ 119 (320)
T 3a99_A 40 PLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER 119 (320)
T ss_dssp CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC
T ss_pred CccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEec
Confidence 3457899999999999999999954 578999999986542211 11123333333 3347788888
Q ss_pred CCeeEEEEEeccC-CChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeec-CCCcEEEee
Q 042123 649 ARHSFLLYEFLER-GSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLD-LEYEAHVAD 726 (849)
Q Consensus 649 ~~~~~lV~e~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~-~~~~~kl~D 726 (849)
.+..++||||+.+ ++|.+++... ..+++.++..++.||+.||+|||+. +|+||||||+||+++ .++.+||+|
T Consensus 120 ~~~~~lv~e~~~~~~~L~~~l~~~---~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL~D 193 (320)
T 3a99_A 120 PDSFVLILERPEPVQDLFDFITER---GALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLID 193 (320)
T ss_dssp SSEEEEEEECCSSEEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECC
T ss_pred CCcEEEEEEcCCCCccHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEEee
Confidence 8999999999986 8999998653 3589999999999999999999999 999999999999999 779999999
Q ss_pred ecCCcccCCCCCCeeeccCCccccccccccCCCC-CccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccC
Q 042123 727 FGIAKSLKPDSSNWTEFAGTCGYIAPELAYTMKI-TEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLD 805 (849)
Q Consensus 727 fG~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~ 805 (849)
||+++..... ......||+.|+|||++.+..+ +.++||||||+++|||++|+.||....... .
T Consensus 194 fg~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~--------------~ 257 (320)
T 3a99_A 194 FGSGALLKDT--VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII--------------R 257 (320)
T ss_dssp CTTCEECCSS--CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHH--------------H
T ss_pred Cccccccccc--cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhhh--------------c
Confidence 9999876532 2344678999999999887665 688999999999999999999997432111 0
Q ss_pred CCCCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 806 PRLPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 806 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
.....+... ...+.+++.+||+.||++|||++|++++
T Consensus 258 ~~~~~~~~~----~~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 258 GQVFFRQRV----SSECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp CCCCCSSCC----CHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ccccccccC----CHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 111111111 1247789999999999999999999986
No 259
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=2.9e-34 Score=306.26 Aligned_cols=249 Identities=25% Similarity=0.385 Sum_probs=171.7
Q ss_pred HhcCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeE
Q 042123 586 ATNDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSF 653 (849)
Q Consensus 586 ~~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~ 653 (849)
..++|+..+.||+|+||.||+|.. .+++.||||++..... ......+.+|+. ++++++...+..+
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 89 (303)
T 2vwi_A 13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC---QTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELW 89 (303)
T ss_dssp CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC-------------------CCCCCCCTTBCCEEEEEESSSCEE
T ss_pred chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhc---chhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcE
Confidence 347899999999999999999965 4689999998764321 122334555544 4677888888999
Q ss_pred EEEEeccCCChhhhhcccc-----cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeec
Q 042123 654 LLYEFLERGSLAAILNTDA-----AAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFG 728 (849)
Q Consensus 654 lV~e~~~~gsL~~~l~~~~-----~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG 728 (849)
+||||+++|+|.+++.... ....+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 90 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg 166 (303)
T 2vwi_A 90 LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFG 166 (303)
T ss_dssp EEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCH
T ss_pred EEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEecc
Confidence 9999999999999986421 234589999999999999999999999 99999999999999999999999999
Q ss_pred CCcccCCCCC-----CeeeccCCccccccccccC-CCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccc---
Q 042123 729 IAKSLKPDSS-----NWTEFAGTCGYIAPELAYT-MKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVA--- 799 (849)
Q Consensus 729 ~a~~~~~~~~-----~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~--- 799 (849)
++........ ......||+.|+|||.+.+ ..++.++||||||+++|||++|+.||................
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 246 (303)
T 2vwi_A 167 VSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPS 246 (303)
T ss_dssp HHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCC
T ss_pred chheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCc
Confidence 9876543221 1234578999999999865 568999999999999999999999997543211100000000
Q ss_pred -cccccCCCCCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 800 -LDQMLDPRLPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 800 -~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
.....+.... . .....+.+++.+||+.||++|||++|++++
T Consensus 247 ~~~~~~~~~~~--~----~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 247 LETGVQDKEML--K----KYGKSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp TTC-----CCC--C----CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred cccccccchhh--h----hhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 0000000000 0 112347789999999999999999999986
No 260
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=9.3e-34 Score=306.36 Aligned_cols=242 Identities=19% Similarity=0.264 Sum_probs=179.2
Q ss_pred cCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHHHH------------Hhhceeec--CCee
Q 042123 588 NDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE------------AFYGFCSH--ARHS 652 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~------------~~~~~~~~--~~~~ 652 (849)
++|+..+.||+|+||+||+|.. .+++.||||++.... ...+.+|+. .+++++.. ....
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-------~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~ 108 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK-------KKKIKREIKILENLRGGPNIITLADIVKDPVSRTP 108 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC-------HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc-------hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCce
Confidence 6789999999999999999954 679999999986432 122333332 35566655 5678
Q ss_pred EEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCC-cEEEeeecCCc
Q 042123 653 FLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEY-EAHVADFGIAK 731 (849)
Q Consensus 653 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~-~~kl~DfG~a~ 731 (849)
++||||+++++|.+++. .+++.++..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||+++
T Consensus 109 ~lv~e~~~~~~l~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~ 179 (330)
T 3nsz_A 109 ALVFEHVNNTDFKQLYQ------TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 179 (330)
T ss_dssp EEEEECCCCCCHHHHGG------GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEEEeccCchhHHHHHH------hCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCce
Confidence 99999999999999874 388999999999999999999999 999999999999999777 89999999998
Q ss_pred ccCCCCCCeeeccCCccccccccccC-CCCCccchHHHHHHHHHHHHhCCCCCCccccccc-------------------
Q 042123 732 SLKPDSSNWTEFAGTCGYIAPELAYT-MKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISS------------------- 791 (849)
Q Consensus 732 ~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~------------------- 791 (849)
...... ......+++.|+|||.+.+ ..++.++||||+||++|||++|+.||........
T Consensus 180 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 258 (330)
T 3nsz_A 180 FYHPGQ-EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID 258 (330)
T ss_dssp ECCTTC-CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHH
T ss_pred EcCCCC-ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHH
Confidence 765433 2345678999999999877 6789999999999999999999999953211100
Q ss_pred -cccccccccccccCCCCCC------CChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 792 -SSLNTDVALDQMLDPRLPA------PSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 792 -~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
................... ...........+.+++.+||+.||++|||++|+++|
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 259 KYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp HTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred HhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 0000000000000000000 000011123458899999999999999999999986
No 261
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=1.3e-33 Score=300.57 Aligned_cols=252 Identities=21% Similarity=0.301 Sum_probs=183.6
Q ss_pred cCCCcCceecCCccceEEEEEec-CCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeEEE
Q 042123 588 NDFDAKYCIGNGGHASVYRAELP-SGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSFLL 655 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~lV 655 (849)
++|+..+.||+|+||.||+|+.. +|+.||||++...... ......+.+|+. ++++++...+..++|
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTET--EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV 80 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccc--hhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEE
Confidence 57889999999999999999664 7999999998653221 111234445544 367788888899999
Q ss_pred EEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccCC
Q 042123 656 YEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLKP 735 (849)
Q Consensus 656 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~~ 735 (849)
|||++ |+|.+++.... ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+.....
T Consensus 81 ~e~~~-~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~ 155 (299)
T 2r3i_A 81 FEFLH-QDLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV 155 (299)
T ss_dssp EECCS-EEHHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCC
T ss_pred EEccc-CCHHHHHHhhh-ccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhccC
Confidence 99998 59999986543 23589999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCeeeccCCccccccccccCCC-CCccchHHHHHHHHHHHHhCCCCCCccccccccc-------ccccc---cccc--
Q 042123 736 DSSNWTEFAGTCGYIAPELAYTMK-ITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSS-------LNTDV---ALDQ-- 802 (849)
Q Consensus 736 ~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~-------~~~~~---~~~~-- 802 (849)
.........+++.|+|||.+.+.. ++.++||||||+++|+|++|+.||.......... ..... ....
T Consensus 156 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (299)
T 2r3i_A 156 PVRTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 235 (299)
T ss_dssp CSBCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGST
T ss_pred CccccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCchhhhhHhhcCc
Confidence 433334457899999999988765 7899999999999999999999997543211000 00000 0000
Q ss_pred ccCCCCCCCC-----hhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 803 MLDPRLPAPS-----RSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 803 ~~~~~~~~~~-----~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
...+..+... .........+.+++.+||+.||++|||++|++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~h 284 (299)
T 2r3i_A 236 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 284 (299)
T ss_dssp TCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0001111000 0001112357889999999999999999999985
No 262
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=2.6e-34 Score=314.85 Aligned_cols=261 Identities=19% Similarity=0.244 Sum_probs=183.4
Q ss_pred cHHHHHHHhcCCCcCceecCCccceEEEEEecCCcEEEEEEecccCCCCc-------hhhHHHHHHHHHH----------
Q 042123 579 LYDEIVKATNDFDAKYCIGNGGHASVYRAELPSGEVVAVKKFHSLLPCDQ-------TVDQKEFLTEVEA---------- 641 (849)
Q Consensus 579 ~~~~~~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~-------~~~~~~~~~ei~~---------- 641 (849)
...++....++|+..+.||+|+||.||+|...+|+.||||++........ ....+.+.+|+..
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 45677888899999999999999999999888899999999865432211 1123456666543
Q ss_pred -hhceee-----cCCeeEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCee
Q 042123 642 -FYGFCS-----HARHSFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLL 715 (849)
Q Consensus 642 -~~~~~~-----~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nil 715 (849)
+++++. .....++||||++ |+|.+++.... ..+++.++..++.||+.||+|||+. +|+||||||+||+
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl 166 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQR--IVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNIL 166 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEE
T ss_pred ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEE
Confidence 455552 2346799999998 58888876433 3589999999999999999999999 9999999999999
Q ss_pred ecCCCcEEEeeecCCcccCCCCCCeeeccCCccccccccccC-CCCCccchHHHHHHHHHHHHhCCCCCCcccccccccc
Q 042123 716 LDLEYEAHVADFGIAKSLKPDSSNWTEFAGTCGYIAPELAYT-MKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSL 794 (849)
Q Consensus 716 l~~~~~~kl~DfG~a~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~ 794 (849)
++.++.+||+|||+++..... .......+|+.|+|||.+.+ ..++.++||||+||++|+|++|+.||...........
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~ 245 (362)
T 3pg1_A 167 LADNNDITICDFNLAREDTAD-ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNK 245 (362)
T ss_dssp ECTTCCEEECCTTC----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH
T ss_pred EcCCCCEEEEecCcccccccc-cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 999999999999999855433 22345678999999999876 6789999999999999999999999975331110000
Q ss_pred c---------------cccccccccCCCC---CCCC--hhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 795 N---------------TDVALDQMLDPRL---PAPS--RSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 795 ~---------------~~~~~~~~~~~~~---~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
. ........+.... +... .........+.+++.+||+.||++|||++|+++|
T Consensus 246 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 246 IVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp HHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 0 0000000111111 1000 0001112347899999999999999999999986
No 263
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=4.2e-34 Score=305.03 Aligned_cols=241 Identities=23% Similarity=0.395 Sum_probs=175.1
Q ss_pred HhcCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHHHHH-----------hhceeec-----
Q 042123 586 ATNDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVEA-----------FYGFCSH----- 648 (849)
Q Consensus 586 ~~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~~-----------~~~~~~~----- 648 (849)
..++|+..+.||+|+||.||+|+. .+++.||||++... ......+.+|+.. +++++.+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 78 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-----EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFV 78 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-----HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCC
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-----HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchh
Confidence 346799999999999999999965 47999999998542 2234456666553 3444322
Q ss_pred --------CCeeEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCC
Q 042123 649 --------ARHSFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEY 720 (849)
Q Consensus 649 --------~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~ 720 (849)
....++||||+++|+|.+++.... ..+++.+++.++.|++.||+|||+. +|+||||||+||+++.++
T Consensus 79 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~ 153 (303)
T 1zy4_A 79 KPMTAVKKKSTLFIQMEYCENGTLYDLIHSEN--LNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESR 153 (303)
T ss_dssp C------CEEEEEEEEECCCSCBHHHHHHHSC--GGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTS
T ss_pred hhhcccccCCceEEEEecCCCCCHHHhhhccc--cccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCC
Confidence 457899999999999999997533 3478899999999999999999999 999999999999999999
Q ss_pred cEEEeeecCCcccCCCC--------------CCeeeccCCccccccccccCC-CCCccchHHHHHHHHHHHHhCCCCCCc
Q 042123 721 EAHVADFGIAKSLKPDS--------------SNWTEFAGTCGYIAPELAYTM-KITEKCDVYSFGVLMWEVIKGKHPRDF 785 (849)
Q Consensus 721 ~~kl~DfG~a~~~~~~~--------------~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~SlGvil~el~tg~~Pf~~ 785 (849)
.+||+|||++....... .......|++.|+|||.+.+. .++.++||||+|+++|||++ ||..
T Consensus 154 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~ 230 (303)
T 1zy4_A 154 NVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFST 230 (303)
T ss_dssp CEEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSS
T ss_pred CEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCC
Confidence 99999999998764321 122345689999999998764 68999999999999999998 5432
Q ss_pred cccccccccccccccccccCCCCCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 786 LSSISSSSLNTDVALDQMLDPRLPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 786 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
... .......+.......+..........+.+++.+||+.||++|||+++++++
T Consensus 231 ~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 231 GME-------RVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp HHH-------HHHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred chh-------HHHHHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 110 011111111111111111122223347789999999999999999999986
No 264
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.9e-34 Score=308.51 Aligned_cols=248 Identities=25% Similarity=0.413 Sum_probs=184.8
Q ss_pred cCCCcCceecCCccceEEEEEe-----cCCcEEEEEEecccCCCCchhhHHHHHHHHHH-----------hhceeecC--
Q 042123 588 NDFDAKYCIGNGGHASVYRAEL-----PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVEA-----------FYGFCSHA-- 649 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~~-----------~~~~~~~~-- 649 (849)
++|+..+.||+|+||.||+|++ .+++.||||++... .....+.+.+|+.. +++++...
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 116 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS----TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR 116 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSC----CSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC---
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccC----CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCC
Confidence 5688899999999999999973 46899999998753 22234456666553 44554443
Q ss_pred CeeEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecC
Q 042123 650 RHSFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGI 729 (849)
Q Consensus 650 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~ 729 (849)
...++||||+++|+|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 117 ~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~ 191 (326)
T 2w1i_A 117 RNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGL 191 (326)
T ss_dssp -CCEEEECCCTTCBHHHHHHHST--TSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTT
T ss_pred CceEEEEECCCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcc
Confidence 36799999999999999996543 3589999999999999999999998 999999999999999999999999999
Q ss_pred CcccCCCCCC---eeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccc----cccccc---cc
Q 042123 730 AKSLKPDSSN---WTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISS----SSLNTD---VA 799 (849)
Q Consensus 730 a~~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~----~~~~~~---~~ 799 (849)
++........ .....++..|+|||.+.+..++.++||||||+++|||++|..||........ ...... ..
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (326)
T 2w1i_A 192 TKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 271 (326)
T ss_dssp CEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHH
T ss_pred hhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHH
Confidence 9877544321 1223567789999999988899999999999999999999999763211000 000000 00
Q ss_pred cccccC--CCCCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 800 LDQMLD--PRLPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 800 ~~~~~~--~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
..+.+. .+.+.+... ...+.+++.+||+.||++|||+.|+++.|+
T Consensus 272 ~~~~~~~~~~~~~~~~~----~~~l~~li~~cl~~dP~~Rps~~el~~~L~ 318 (326)
T 2w1i_A 272 LIELLKNNGRLPRPDGC----PDEIYMIMTECWNNNVNQRPSFRDLALRVD 318 (326)
T ss_dssp HHHHHHTTCCCCCCTTC----CHHHHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred HHHHhhcCCCCCCCCcc----cHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 111111 111212222 234888999999999999999999999875
No 265
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=5.4e-34 Score=332.62 Aligned_cols=234 Identities=26% Similarity=0.431 Sum_probs=178.3
Q ss_pred ceecCCccceEEEEEe---cCCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeEEEEEec
Q 042123 594 YCIGNGGHASVYRAEL---PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSFLLYEFL 659 (849)
Q Consensus 594 ~~lG~G~~g~Vy~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~lV~e~~ 659 (849)
+.||+|+||+||+|.+ ..++.||||+++.... .....+.+.+|+. .+++++.. +..++||||+
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~ 451 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN--DPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMA 451 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGG--CGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECC
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEcc
Confidence 4799999999999954 2467899999875422 2223455666654 36777754 5678999999
Q ss_pred cCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccCCCCCC
Q 042123 660 ERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLKPDSSN 739 (849)
Q Consensus 660 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~ 739 (849)
++|+|.+++... ..+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.+......
T Consensus 452 ~~g~L~~~l~~~---~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 525 (635)
T 4fl3_A 452 ELGPLNKYLQQN---RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 525 (635)
T ss_dssp TTEEHHHHHHHC---TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC----
T ss_pred CCCCHHHHHhhC---CCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccc
Confidence 999999999643 3589999999999999999999999 9999999999999999999999999999876543321
Q ss_pred ---eeeccCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCC-CCCCChh
Q 042123 740 ---WTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIK-GKHPRDFLSSISSSSLNTDVALDQMLDPR-LPAPSRS 814 (849)
Q Consensus 740 ---~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 814 (849)
.....+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... .....+.... ...+...
T Consensus 526 ~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~--------~~~~~i~~~~~~~~p~~~ 597 (635)
T 4fl3_A 526 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--------EVTAMLEKGERMGCPAGC 597 (635)
T ss_dssp ---------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--------HHHHHHHTTCCCCCCTTC
T ss_pred cccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHcCCCCCCCCCC
Confidence 223346788999999999999999999999999999998 99999743321 1111121211 1111122
Q ss_pred hHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 815 AQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 815 ~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
...+.+++..||+.||++|||+++|++.|+
T Consensus 598 ----~~~l~~li~~cl~~dP~~RPs~~~l~~~L~ 627 (635)
T 4fl3_A 598 ----PREMYDLMNLCWTYDVENRPGFAAVELRLR 627 (635)
T ss_dssp ----CHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred ----CHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence 234888999999999999999999999875
No 266
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=3e-34 Score=304.34 Aligned_cols=242 Identities=27% Similarity=0.422 Sum_probs=175.6
Q ss_pred cCCCcCceecCCccceEEEEEec--CCc--EEEEEEecccCCCCchhhHHHHHHHHHH-----------hhceeecCCee
Q 042123 588 NDFDAKYCIGNGGHASVYRAELP--SGE--VVAVKKFHSLLPCDQTVDQKEFLTEVEA-----------FYGFCSHARHS 652 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~~--~~~--~vavK~~~~~~~~~~~~~~~~~~~ei~~-----------~~~~~~~~~~~ 652 (849)
++|+..+.||+|+||.||+|++. +++ .||||.++..... .....+.+.+|+.. +++++... ..
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-~~ 95 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLS-QPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTP-PM 95 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC---------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS-SC
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccC-CHHHHHHHHHHHHHHHhCCCCCcccEEEEEccC-Cc
Confidence 57889999999999999999753 333 6899988654221 12234455666543 55665554 47
Q ss_pred EEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcc
Q 042123 653 FLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKS 732 (849)
Q Consensus 653 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~ 732 (849)
++||||+++|+|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 96 ~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~ 170 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKHQ--GHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRA 170 (291)
T ss_dssp EEEEECCTTCBHHHHHHHHG--GGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred eeeEecccCCCHHHHHHhcc--CCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEcccccccc
Confidence 89999999999999997543 3589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCC---eeeccCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCC--
Q 042123 733 LKPDSSN---WTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIK-GKHPRDFLSSISSSSLNTDVALDQMLDP-- 806 (849)
Q Consensus 733 ~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~-- 806 (849)
....... .....++..|+|||.+.+..++.++||||||+++|+|++ |+.||...... .....+...
T Consensus 171 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--------~~~~~~~~~~~ 242 (291)
T 1u46_A 171 LPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS--------QILHKIDKEGE 242 (291)
T ss_dssp CCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--------HHHHHHHTSCC
T ss_pred ccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHH--------HHHHHHHccCC
Confidence 7544321 223456788999999998889999999999999999999 99999743321 111111111
Q ss_pred CCCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 807 RLPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 807 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
..+.+.. ....+.+++.+||+.||++|||+.+++++|+
T Consensus 243 ~~~~~~~----~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~ 280 (291)
T 1u46_A 243 RLPRPED----CPQDIYNVMVQCWAHKPEDRPTFVALRDFLL 280 (291)
T ss_dssp CCCCCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCCcC----cCHHHHHHHHHHccCCcccCcCHHHHHHHHH
Confidence 1111111 2234888999999999999999999999874
No 267
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=3.3e-34 Score=313.15 Aligned_cols=247 Identities=21% Similarity=0.300 Sum_probs=165.4
Q ss_pred hcCCCcCceecCCccceEEEEE-ecCCcEEEEEEecccCCCCchhhHHHHHHHHHH-----------hhceeecC-----
Q 042123 587 TNDFDAKYCIGNGGHASVYRAE-LPSGEVVAVKKFHSLLPCDQTVDQKEFLTEVEA-----------FYGFCSHA----- 649 (849)
Q Consensus 587 ~~~f~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~~-----------~~~~~~~~----- 649 (849)
.++|+..+.||+|+||.||+|. ..+|+.||||++.... ......+.+.+|+.. +++++...
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~ 105 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 105 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTT--SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGG
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccc--cCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCcccc
Confidence 3689999999999999999995 4579999999986532 222334455566553 45555432
Q ss_pred -CeeEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeec
Q 042123 650 -RHSFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFG 728 (849)
Q Consensus 650 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG 728 (849)
...++|+||+ +++|.+++.. ..+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 106 ~~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG 177 (367)
T 2fst_X 106 FNDVYLVTHLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG 177 (367)
T ss_dssp CCCCEEEEECC-CEECC---------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC--
T ss_pred CCeEEEEeccc-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeecc
Confidence 5679999999 6799998864 3489999999999999999999999 99999999999999999999999999
Q ss_pred CCcccCCCCCCeeeccCCccccccccccC-CCCCccchHHHHHHHHHHHHhCCCCCCccccccccc-------ccccc--
Q 042123 729 IAKSLKPDSSNWTEFAGTCGYIAPELAYT-MKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSS-------LNTDV-- 798 (849)
Q Consensus 729 ~a~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~-------~~~~~-- 798 (849)
+++..... .....||+.|+|||.+.+ ..++.++||||+||++|||++|+.||.......... .....
T Consensus 178 ~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~ 254 (367)
T 2fst_X 178 LARHTADE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 254 (367)
T ss_dssp ----------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHH
T ss_pred cccccccc---CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 99865432 345678999999999876 678999999999999999999999997543211000 00000
Q ss_pred ------ccccccC--CCCCCCC--hhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 799 ------ALDQMLD--PRLPAPS--RSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 799 ------~~~~~~~--~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
.....+. +..+... .........+.+++.+||+.||++|||++|+++|
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 255 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp TTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 0000000 0001000 0000112347899999999999999999999876
No 268
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=3.1e-34 Score=316.96 Aligned_cols=253 Identities=21% Similarity=0.238 Sum_probs=179.6
Q ss_pred cCCCcCceecCCccceEEEEEecCCcEEEEEEecccCCCCchhhHHHHHHH-----HHHhhceeecC------CeeEEEE
Q 042123 588 NDFDAKYCIGNGGHASVYRAELPSGEVVAVKKFHSLLPCDQTVDQKEFLTE-----VEAFYGFCSHA------RHSFLLY 656 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e-----i~~~~~~~~~~------~~~~lV~ 656 (849)
.+|+..+.||+|+||.||+|+...+..||+|++....... ..+...++. +..+++++... ...++||
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~~--~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~ 117 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFK--NRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVL 117 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTSC--CHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcchH--HHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEe
Confidence 5788999999999999999988777779999886542221 122233322 33466666332 2378999
Q ss_pred EeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeec-CCCcEEEeeecCCcccCC
Q 042123 657 EFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLD-LEYEAHVADFGIAKSLKP 735 (849)
Q Consensus 657 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~-~~~~~kl~DfG~a~~~~~ 735 (849)
||++++.+............+++..+..++.||+.||+|||+. +|+||||||+||+++ .++.+||+|||+++....
T Consensus 118 e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~ 194 (394)
T 4e7w_A 118 EYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIA 194 (394)
T ss_dssp ECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred eccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCcccccC
Confidence 9999855444433233345689999999999999999999999 999999999999999 789999999999987654
Q ss_pred CCCCeeeccCCccccccccccCC-CCCccchHHHHHHHHHHHHhCCCCCCccccccccc--------ccc---ccccccc
Q 042123 736 DSSNWTEFAGTCGYIAPELAYTM-KITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSS--------LNT---DVALDQM 803 (849)
Q Consensus 736 ~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~--------~~~---~~~~~~~ 803 (849)
.. ......+|+.|+|||.+.+. .++.++||||+||++|||++|+.||.......... ... .......
T Consensus 195 ~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~ 273 (394)
T 4e7w_A 195 GE-PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNY 273 (394)
T ss_dssp TC-CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGG
T ss_pred CC-CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhh
Confidence 32 23456789999999998764 58999999999999999999999997543211000 000 0000001
Q ss_pred cCCCCCCCC-hh-----hHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 804 LDPRLPAPS-RS-----AQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 804 ~~~~~~~~~-~~-----~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
.....+... .. .......+.+++.+||+.||++|||+.|+++|
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 274 MEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp SSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred hhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 111111000 00 00122358899999999999999999999876
No 269
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=5.7e-34 Score=314.23 Aligned_cols=256 Identities=20% Similarity=0.229 Sum_probs=179.2
Q ss_pred HHHhcCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHH-----HHHhhceee----------
Q 042123 584 VKATNDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTE-----VEAFYGFCS---------- 647 (849)
Q Consensus 584 ~~~~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e-----i~~~~~~~~---------- 647 (849)
....++|+..+.||+|+||.||+|.. .+|+.||||++....... ..+...++. +..+++++.
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~--~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~ 80 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYK--NRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPP 80 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTSC--CHHHHHHTTCCCTTBCCEEEEEEEC--------
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcchH--HHHHHHHHHcCCCCccchhheeeecCccccccc
Confidence 34567899999999999999999954 679999999986542221 112222222 334556552
Q ss_pred ----------------------------cCCeeEEEEEeccCCChhhhhccc-ccccCCCHHHHHHHHHHHHHHHHHHHh
Q 042123 648 ----------------------------HARHSFLLYEFLERGSLAAILNTD-AAAQELGWSQRMNVIKAVAHALSYLHH 698 (849)
Q Consensus 648 ----------------------------~~~~~~lV~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~l~~LH~ 698 (849)
.....++||||+++ +|.+.+... .....+++..+..++.||+.||+|||+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~ 159 (383)
T 3eb0_A 81 QPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHS 159 (383)
T ss_dssp -----------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT
T ss_pred ccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 23348899999985 888777542 223469999999999999999999999
Q ss_pred cCCCCeEecCCCCCCeeec-CCCcEEEeeecCCcccCCCCCCeeeccCCccccccccccCC-CCCccchHHHHHHHHHHH
Q 042123 699 DCFPPIVHRDISSKNLLLD-LEYEAHVADFGIAKSLKPDSSNWTEFAGTCGYIAPELAYTM-KITEKCDVYSFGVLMWEV 776 (849)
Q Consensus 699 ~~~~~ivH~dlk~~Nill~-~~~~~kl~DfG~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~SlGvil~el 776 (849)
. +|+||||||+||+++ .++.+||+|||+++...... ......+|+.|+|||.+.+. .++.++||||+||++|||
T Consensus 160 ~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el 235 (383)
T 3eb0_A 160 L---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE-PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGEL 235 (383)
T ss_dssp T---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS-CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHH
T ss_pred C---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC-CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHH
Confidence 8 999999999999997 68999999999998765433 23456789999999998765 489999999999999999
Q ss_pred HhCCCCCCcccccccccc-------ccccc-------cccccCCCCCCCCh---hhHHHHHHHHHHHhhccCCCCCCCCC
Q 042123 777 IKGKHPRDFLSSISSSSL-------NTDVA-------LDQMLDPRLPAPSR---SAQEKLISIMEVAFSCFNESPESRPT 839 (849)
Q Consensus 777 ~tg~~Pf~~~~~~~~~~~-------~~~~~-------~~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPt 839 (849)
++|+.||........... ..... .....-+......- ........+.+++.+||+.||++|||
T Consensus 236 l~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t 315 (383)
T 3eb0_A 236 ILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRIN 315 (383)
T ss_dssp HHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCC
T ss_pred HhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCC
Confidence 999999975432110000 00000 00000000000000 00011234789999999999999999
Q ss_pred HHHHHhh
Q 042123 840 MKIISQQ 846 (849)
Q Consensus 840 ~~eil~~ 846 (849)
+.|+++|
T Consensus 316 ~~e~l~h 322 (383)
T 3eb0_A 316 PYEAMAH 322 (383)
T ss_dssp HHHHHTS
T ss_pred HHHHhcC
Confidence 9999876
No 270
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.9e-34 Score=319.13 Aligned_cols=194 Identities=21% Similarity=0.328 Sum_probs=137.5
Q ss_pred cCCCc-CceecCCccceEEEEEec---CCcEEEEEEecccCCCCchhhHHHHHHH-----HHHhhcee--ecCCeeEEEE
Q 042123 588 NDFDA-KYCIGNGGHASVYRAELP---SGEVVAVKKFHSLLPCDQTVDQKEFLTE-----VEAFYGFC--SHARHSFLLY 656 (849)
Q Consensus 588 ~~f~~-~~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~e-----i~~~~~~~--~~~~~~~lV~ 656 (849)
+.|+. .++||+|+||+||+|+.. +++.||||++...........+...++. +..+++++ ......++||
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~ 99 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLF 99 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEE
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEE
Confidence 34555 558999999999999764 5789999998654221111111122222 22356666 3467899999
Q ss_pred EeccCCChhhhhccccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeee----cCCCcEEEee
Q 042123 657 EFLERGSLAAILNTDAA------AQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLL----DLEYEAHVAD 726 (849)
Q Consensus 657 e~~~~gsL~~~l~~~~~------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill----~~~~~~kl~D 726 (849)
||+++ +|.+++..... ...+++.++..++.||+.||+|||+. +|+||||||+||++ +.++.+||+|
T Consensus 100 e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~D 175 (405)
T 3rgf_A 100 DYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIAD 175 (405)
T ss_dssp ECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCEEECC
T ss_pred eCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcEEEEE
Confidence 99975 88887753321 12489999999999999999999999 99999999999999 6778999999
Q ss_pred ecCCcccCCCC---CCeeeccCCccccccccccCC-CCCccchHHHHHHHHHHHHhCCCCCCc
Q 042123 727 FGIAKSLKPDS---SNWTEFAGTCGYIAPELAYTM-KITEKCDVYSFGVLMWEVIKGKHPRDF 785 (849)
Q Consensus 727 fG~a~~~~~~~---~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~SlGvil~el~tg~~Pf~~ 785 (849)
||+++...... .......||+.|+|||++.+. .++.++||||+||++|||++|+.||..
T Consensus 176 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~ 238 (405)
T 3rgf_A 176 MGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 238 (405)
T ss_dssp TTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred CCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCC
Confidence 99998765432 223456789999999998874 589999999999999999999999964
No 271
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=6.7e-34 Score=311.51 Aligned_cols=249 Identities=20% Similarity=0.291 Sum_probs=181.6
Q ss_pred hcCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHHHHH-----------hhceeecC-----
Q 042123 587 TNDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVEA-----------FYGFCSHA----- 649 (849)
Q Consensus 587 ~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~~-----------~~~~~~~~----- 649 (849)
.++|+..+.||+|+||.||+|.. .+++.||||++... ........+.+|+.. +++++...
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 102 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPF---EHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQM 102 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCT---TCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTC
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccc---cCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCcccc
Confidence 36899999999999999999965 47889999998643 222334556666553 44555433
Q ss_pred CeeEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecC
Q 042123 650 RHSFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGI 729 (849)
Q Consensus 650 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~ 729 (849)
...++||||+++ +|.+++.. ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 103 ~~~~iv~e~~~~-~L~~~l~~----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 174 (364)
T 3qyz_A 103 KDVYIVQDLMET-DLYKLLKT----QHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGL 174 (364)
T ss_dssp CCEEEEEECCSE-EHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred ceEEEEEcccCc-CHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcc
Confidence 468999999985 99998854 3489999999999999999999999 999999999999999999999999999
Q ss_pred CcccCCCCC---CeeeccCCccccccccccC-CCCCccchHHHHHHHHHHHHhCCCCCCcccccccccc-------cccc
Q 042123 730 AKSLKPDSS---NWTEFAGTCGYIAPELAYT-MKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSL-------NTDV 798 (849)
Q Consensus 730 a~~~~~~~~---~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~-------~~~~ 798 (849)
++....... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||........... ....
T Consensus 175 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~ 254 (364)
T 3qyz_A 175 ARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 254 (364)
T ss_dssp CEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHH
T ss_pred eEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHH
Confidence 987653321 1244579999999998654 4589999999999999999999999975432211000 0000
Q ss_pred ccc------------cccCCCCCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 799 ALD------------QMLDPRLPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 799 ~~~------------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
... ....+...............+.+++.+||+.||++|||++|+++|
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 255 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp HHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000 000000000000001112357899999999999999999999986
No 272
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=1.7e-33 Score=303.84 Aligned_cols=255 Identities=20% Similarity=0.303 Sum_probs=184.1
Q ss_pred HhcCCCcCceecCCccceEEEEEe--cCCcEEEEEEecccCCCC----chhhHHHHHHHH--------HHhhceee----
Q 042123 586 ATNDFDAKYCIGNGGHASVYRAEL--PSGEVVAVKKFHSLLPCD----QTVDQKEFLTEV--------EAFYGFCS---- 647 (849)
Q Consensus 586 ~~~~f~~~~~lG~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~----~~~~~~~~~~ei--------~~~~~~~~---- 647 (849)
+.++|+..+.||+|+||.||+|+. .+++.||||++....... ....+....+.+ .++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 447899999999999999999976 468899999986432211 111122222222 23566665
Q ss_pred -cCCeeEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEee
Q 042123 648 -HARHSFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVAD 726 (849)
Q Consensus 648 -~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~D 726 (849)
.....++||||++ |+|.+++.... ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~D 163 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVP-EPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLAD 163 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSC-TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECS
T ss_pred CCCceEEEEEecCC-CCHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEec
Confidence 4567899999998 59999986543 23489999999999999999999999 999999999999999999999999
Q ss_pred ecCCcccCCCCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCcccccccc-------------c
Q 042123 727 FGIAKSLKPDSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSS-------------S 793 (849)
Q Consensus 727 fG~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~-------------~ 793 (849)
||+++..... .......+++.|+|||.+.+..++.++||||||+++|||++|+.||......... .
T Consensus 164 fg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 242 (326)
T 1blx_A 164 FGLARIYSFQ-MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEED 242 (326)
T ss_dssp CCSCCCCCGG-GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGG
T ss_pred CcccccccCC-CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCccc
Confidence 9999865432 2234467899999999999989999999999999999999999999754321100 0
Q ss_pred ccccccc-ccccCC-CCCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 794 LNTDVAL-DQMLDP-RLPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 794 ~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
....... ...... ...............+.+++.+||+.||++|||++|++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 297 (326)
T 1blx_A 243 WPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 297 (326)
T ss_dssp SCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred CccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 0000000 000000 0000000111122347789999999999999999999975
No 273
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=2.2e-33 Score=306.81 Aligned_cols=246 Identities=17% Similarity=0.242 Sum_probs=178.7
Q ss_pred cCCCcCceecCCccceEEEEEec-CC-cEEEEEEecccCCCCchhhHHHHHHHHH-----------------Hhhceeec
Q 042123 588 NDFDAKYCIGNGGHASVYRAELP-SG-EVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------------AFYGFCSH 648 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------------~~~~~~~~ 648 (849)
++|++.+.||+|+||.||+|... ++ +.||||++.... .....+.+|+. .+.+++..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~ 93 (355)
T 2eu9_A 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG-----KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNF 93 (355)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH-----HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEE
T ss_pred ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc-----cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeee
Confidence 68999999999999999999653 44 689999986421 11222333322 23456677
Q ss_pred CCeeEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeee------------
Q 042123 649 ARHSFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLL------------ 716 (849)
Q Consensus 649 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill------------ 716 (849)
.+..++||||+ ++++.+++.... ...+++.++..++.||+.||+|||+. +|+||||||+||++
T Consensus 94 ~~~~~lv~e~~-~~~l~~~l~~~~-~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~ 168 (355)
T 2eu9_A 94 HGHMCIAFELL-GKNTFEFLKENN-FQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEH 168 (355)
T ss_dssp TTEEEEEEECC-CCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC
T ss_pred CCeEEEEEecc-CCChHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeccccccccccc
Confidence 78999999999 567777765432 23589999999999999999999998 99999999999999
Q ss_pred -------cCCCcEEEeeecCCcccCCCCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccc
Q 042123 717 -------DLEYEAHVADFGIAKSLKPDSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSI 789 (849)
Q Consensus 717 -------~~~~~~kl~DfG~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~ 789 (849)
+.++.+||+|||+++..... .....||+.|+|||++.+..++.++||||||+++|||++|+.||......
T Consensus 169 ~~~~~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~ 245 (355)
T 2eu9_A 169 KSCEEKSVKNTSIRVADFGSATFDHEH---HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENR 245 (355)
T ss_dssp -CCCEEEESCCCEEECCCTTCEETTSC---CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred ccccccccCCCcEEEeecCcccccccc---ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH
Confidence 56789999999999865432 24467899999999999999999999999999999999999999753321
Q ss_pred cccc-------ccccccc------ccccCCC--CCCC-----------------ChhhHHHHHHHHHHHhhccCCCCCCC
Q 042123 790 SSSS-------LNTDVAL------DQMLDPR--LPAP-----------------SRSAQEKLISIMEVAFSCFNESPESR 837 (849)
Q Consensus 790 ~~~~-------~~~~~~~------~~~~~~~--~~~~-----------------~~~~~~~~~~l~~li~~cl~~dP~~R 837 (849)
.... ....... ....... .... ..........+.+++.+||+.||++|
T Consensus 246 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R 325 (355)
T 2eu9_A 246 EHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQR 325 (355)
T ss_dssp HHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTS
T ss_pred HHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhC
Confidence 1000 0000000 0000000 0000 00011223468899999999999999
Q ss_pred CCHHHHHhh
Q 042123 838 PTMKIISQQ 846 (849)
Q Consensus 838 Pt~~eil~~ 846 (849)
||++|++++
T Consensus 326 pt~~e~l~h 334 (355)
T 2eu9_A 326 ITLAEALLH 334 (355)
T ss_dssp CCHHHHTTS
T ss_pred cCHHHHhcC
Confidence 999999875
No 274
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=1.5e-33 Score=304.18 Aligned_cols=245 Identities=26% Similarity=0.377 Sum_probs=164.2
Q ss_pred cCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHHHH------------HhhceeecCCeeEE
Q 042123 588 NDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE------------AFYGFCSHARHSFL 654 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~------------~~~~~~~~~~~~~l 654 (849)
++|+..+.||+|+||.||+|.. .+|+.||||++..... ......+..|+. ++++++...+..++
T Consensus 22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~l 98 (327)
T 3aln_A 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVD---EKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWI 98 (327)
T ss_dssp CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCC---HHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEE
T ss_pred HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccC---chHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEE
Confidence 6788899999999999999966 4799999999875421 222333444433 36778888899999
Q ss_pred EEEeccCCChhhhhcccc--cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcc
Q 042123 655 LYEFLERGSLAAILNTDA--AAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKS 732 (849)
Q Consensus 655 V~e~~~~gsL~~~l~~~~--~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~ 732 (849)
||||+++ +|.+++.... ....+++..+..++.|++.||.|||+.. +|+||||||+||+++.++.+||+|||+++.
T Consensus 99 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~ 175 (327)
T 3aln_A 99 CMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQ 175 (327)
T ss_dssp EECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGGEEEETTTEEEECCCSSSCC
T ss_pred EEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHHEEEcCCCCEEEccCCCcee
Confidence 9999986 8888775321 1345899999999999999999999953 799999999999999999999999999987
Q ss_pred cCCCCCCeeeccCCccccccccc----cCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCC
Q 042123 733 LKPDSSNWTEFAGTCGYIAPELA----YTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRL 808 (849)
Q Consensus 733 ~~~~~~~~~~~~g~~~y~aPE~~----~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 808 (849)
..... ......||+.|+|||.+ .+..++.++||||||+++|+|++|+.||....... ...........
T Consensus 176 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-------~~~~~~~~~~~ 247 (327)
T 3aln_A 176 LVDSI-AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF-------DQLTQVVKGDP 247 (327)
T ss_dssp -------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC--------------CCCCCSCC
T ss_pred ccccc-ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHH-------HHHHHHhcCCC
Confidence 65432 22344789999999998 46678999999999999999999999997432110 11111111111
Q ss_pred CCC-ChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 809 PAP-SRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 809 ~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
+.. ..........+.+++.+||+.||++|||+++++++
T Consensus 248 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 248 PQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp CCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 100 00001122348889999999999999999999875
No 275
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=7.9e-34 Score=300.33 Aligned_cols=244 Identities=21% Similarity=0.334 Sum_probs=187.3
Q ss_pred HHhcCCCcCceecCCccceEEEEEec-CCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCee
Q 042123 585 KATNDFDAKYCIGNGGHASVYRAELP-SGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHS 652 (849)
Q Consensus 585 ~~~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~ 652 (849)
...++|++.+.||+|+||.||+|+.. +++.||||++...... ......+.+|+. ++++++......
T Consensus 19 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 96 (287)
T 2wei_A 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK--NKDTSTILREVELLKKLDHPNIMKLFEILEDSSSF 96 (287)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBS--SSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred HHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccc--hHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeE
Confidence 34578999999999999999999664 7899999998654221 122344555544 367788888899
Q ss_pred EEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCC---CcEEEeeecC
Q 042123 653 FLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLE---YEAHVADFGI 729 (849)
Q Consensus 653 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~---~~~kl~DfG~ 729 (849)
++||||+++++|.+++... ..+++.++..++.|++.||+|||+. +++||||||+||+++.+ +.+||+|||+
T Consensus 97 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~ 170 (287)
T 2wei_A 97 YIVGELYTGGELFDEIIKR---KRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGL 170 (287)
T ss_dssp EEEECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTG
T ss_pred EEEEEccCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCc
Confidence 9999999999999988643 3589999999999999999999999 99999999999999764 4799999999
Q ss_pred CcccCCCCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCC
Q 042123 730 AKSLKPDSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLP 809 (849)
Q Consensus 730 a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 (849)
+....... ......+++.|+|||.+.+ .++.++||||||+++|+|++|+.||...... .....+......
T Consensus 171 ~~~~~~~~-~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~ 240 (287)
T 2wei_A 171 STCFQQNT-KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY--------DILKRVETGKYA 240 (287)
T ss_dssp GGTBCCCS-SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCCCC
T ss_pred ceeecCCC-ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHcCCCC
Confidence 98765432 2234568899999998865 4899999999999999999999999743321 111112222221
Q ss_pred CCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 810 APSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 810 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
.+..........+.+++.+||+.||++|||++|++++
T Consensus 241 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 241 FDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp CCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred CCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence 1111111223357889999999999999999999975
No 276
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=6.4e-34 Score=306.05 Aligned_cols=243 Identities=20% Similarity=0.314 Sum_probs=178.7
Q ss_pred HhcCCCcCceecCCccceEEEEEecCCcEEEEEEecccCCCCchhhHHHHH-----------HHHHHhhceeecCCeeEE
Q 042123 586 ATNDFDAKYCIGNGGHASVYRAELPSGEVVAVKKFHSLLPCDQTVDQKEFL-----------TEVEAFYGFCSHARHSFL 654 (849)
Q Consensus 586 ~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~-----------~ei~~~~~~~~~~~~~~l 654 (849)
..++|+..+.||+|+||.||+|+... .+|+|.+......... .+.+. ..+..+++++......++
T Consensus 31 ~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~--~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~i 106 (319)
T 2y4i_B 31 PFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQ--LKAFKREVMAYRQTRHENVVLFMGACMSPPHLAI 106 (319)
T ss_dssp CCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCC--CCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEE
T ss_pred CHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHH--HHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEE
Confidence 45789999999999999999998753 5999988643211110 11122 234457888888899999
Q ss_pred EEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccC
Q 042123 655 LYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLK 734 (849)
Q Consensus 655 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~ 734 (849)
||||+++++|.+++.... ..+++.++..++.||+.||+|||+. +|+||||||+||+++ ++.+||+|||+++...
T Consensus 107 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~ 180 (319)
T 2y4i_B 107 ITSLCKGRTLYSVVRDAK--IVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSISG 180 (319)
T ss_dssp ECBCCCSEEHHHHTTSSC--CCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC---
T ss_pred EeecccCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCccccc
Confidence 999999999999997543 3589999999999999999999999 999999999999998 6899999999987543
Q ss_pred CC-----CCCeeeccCCccccccccccC---------CCCCccchHHHHHHHHHHHHhCCCCCCcccccccccccccccc
Q 042123 735 PD-----SSNWTEFAGTCGYIAPELAYT---------MKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVAL 800 (849)
Q Consensus 735 ~~-----~~~~~~~~g~~~y~aPE~~~~---------~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~ 800 (849)
.. ........|++.|+|||.+.+ ..++.++||||||+++|||++|+.||....... ..
T Consensus 181 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~--------~~ 252 (319)
T 2y4i_B 181 VLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEA--------II 252 (319)
T ss_dssp -------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHH--------HH
T ss_pred cccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--------HH
Confidence 21 122334568999999999864 457889999999999999999999997433211 11
Q ss_pred ccccCCCCCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 801 DQMLDPRLPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
..+.....+.... ......+.+++.+||+.||++|||++++++.|+
T Consensus 253 ~~~~~~~~~~~~~--~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~ 298 (319)
T 2y4i_B 253 WQMGTGMKPNLSQ--IGMGKEISDILLFCWAFEQEERPTFTKLMDMLE 298 (319)
T ss_dssp HHHHTTCCCCCCC--SSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHT
T ss_pred HHhccCCCCCCCc--CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 1111111110000 001123778999999999999999999999885
No 277
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=1.5e-33 Score=309.45 Aligned_cols=246 Identities=21% Similarity=0.288 Sum_probs=178.1
Q ss_pred hcCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCee--
Q 042123 587 TNDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHS-- 652 (849)
Q Consensus 587 ~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~-- 652 (849)
.++|...+.||+|+||.||+|.. .+|+.||||++..... .......+.+|+. .+++++......
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 118 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQ--SEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRN 118 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTS--SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTT
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEeccccc--chhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCccc
Confidence 36889999999999999999954 5799999999875422 2233445556654 356666655543
Q ss_pred ----EEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeec
Q 042123 653 ----FLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFG 728 (849)
Q Consensus 653 ----~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG 728 (849)
++||||++ |+|.+++. ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 119 ~~~~~lv~e~~~-~~l~~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg 189 (371)
T 4exu_A 119 FYDFYLVMPFMQ-TDLQKIMG-----MEFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFG 189 (371)
T ss_dssp CCCCEEEEECCC-EEHHHHTT-----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTT
T ss_pred ceeEEEEEcccc-ccHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecC
Confidence 99999998 58888873 2389999999999999999999999 99999999999999999999999999
Q ss_pred CCcccCCCCCCeeeccCCccccccccccC-CCCCccchHHHHHHHHHHHHhCCCCCCccccccccc-------cccccc-
Q 042123 729 IAKSLKPDSSNWTEFAGTCGYIAPELAYT-MKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSS-------LNTDVA- 799 (849)
Q Consensus 729 ~a~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~-------~~~~~~- 799 (849)
+++..... .....+|+.|+|||.+.+ ..++.++||||+||++|+|++|+.||.......... ......
T Consensus 190 ~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 266 (371)
T 4exu_A 190 LARHADAE---MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFV 266 (371)
T ss_dssp CC-----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHH
T ss_pred cccccccC---cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHH
Confidence 99865432 344678999999999877 678999999999999999999999997543211000 000000
Q ss_pred -------cccc---cCCCCCCC-ChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 800 -------LDQM---LDPRLPAP-SRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 800 -------~~~~---~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
.... +....... ..........+.+++.+||+.||++|||++|++++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 267 QKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp TTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 0000 00000000 00001123458899999999999999999999886
No 278
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=2.2e-33 Score=308.92 Aligned_cols=247 Identities=19% Similarity=0.239 Sum_probs=177.8
Q ss_pred cCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHH----------------------HHHhhc
Q 042123 588 NDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTE----------------------VEAFYG 644 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e----------------------i~~~~~ 644 (849)
++|+..+.||+|+||+||+|+. .+++.||||++.... .....+.+| +..+++
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~ 93 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-----VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLD 93 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-----HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-----cchhhhhHHHHHHHHhhcccccchhccccchHHHHHH
Confidence 6899999999999999999965 578999999986421 111222222 223455
Q ss_pred eeecCC----eeEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeec---
Q 042123 645 FCSHAR----HSFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLD--- 717 (849)
Q Consensus 645 ~~~~~~----~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~--- 717 (849)
++...+ ..++||||+ +++|.+++.... ...+++.++..++.||+.||+|||+.+ +|+||||||+||+++
T Consensus 94 ~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~ 169 (373)
T 1q8y_A 94 HFNHKGPNGVHVVMVFEVL-GENLLALIKKYE-HRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVD 169 (373)
T ss_dssp EEEEEETTEEEEEEEECCC-CEEHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEE
T ss_pred HhhccCCCCceEEEEEecC-CCCHHHHHHHhh-ccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccC
Confidence 555433 789999999 889999987543 234899999999999999999999953 799999999999994
Q ss_pred ---CCCcEEEeeecCCcccCCCCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCcccccccccc
Q 042123 718 ---LEYEAHVADFGIAKSLKPDSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSL 794 (849)
Q Consensus 718 ---~~~~~kl~DfG~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~ 794 (849)
..+.+||+|||++...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...........
T Consensus 170 ~~~~~~~~kl~Dfg~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~ 246 (373)
T 1q8y_A 170 SPENLIQIKIADLGNACWYDEH---YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKD 246 (373)
T ss_dssp TTTTEEEEEECCCTTCEETTBC---CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CH
T ss_pred CCcCcceEEEcccccccccCCC---CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCCh
Confidence 4458999999999876532 2345789999999999999999999999999999999999999974332110000
Q ss_pred c-----------------------------cccccccccCCCCC-------CCChhhHHHHHHHHHHHhhccCCCCCCCC
Q 042123 795 N-----------------------------TDVALDQMLDPRLP-------APSRSAQEKLISIMEVAFSCFNESPESRP 838 (849)
Q Consensus 795 ~-----------------------------~~~~~~~~~~~~~~-------~~~~~~~~~~~~l~~li~~cl~~dP~~RP 838 (849)
. .......+...... ............+.+++.+||+.||++||
T Consensus 247 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp 326 (373)
T 1q8y_A 247 DDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRA 326 (373)
T ss_dssp HHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCB
T ss_pred HHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccC
Confidence 0 00000000000000 00011234556788999999999999999
Q ss_pred CHHHHHhh
Q 042123 839 TMKIISQQ 846 (849)
Q Consensus 839 t~~eil~~ 846 (849)
|++|+++|
T Consensus 327 t~~ell~h 334 (373)
T 1q8y_A 327 DAGGLVNH 334 (373)
T ss_dssp CHHHHHTC
T ss_pred CHHHHhhC
Confidence 99999986
No 279
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=1.1e-33 Score=315.04 Aligned_cols=252 Identities=23% Similarity=0.265 Sum_probs=177.2
Q ss_pred cCCCcCceecCCccceEEEEEec-CCcEEEEEEecccCCCCchhhHHHHHHH-----HHHhhceeec------CCeeEEE
Q 042123 588 NDFDAKYCIGNGGHASVYRAELP-SGEVVAVKKFHSLLPCDQTVDQKEFLTE-----VEAFYGFCSH------ARHSFLL 655 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e-----i~~~~~~~~~------~~~~~lV 655 (849)
.+|+..+.||+|+||.||+|+.. +|+.||||++....... ..+.+.++. +.++++++.. ....++|
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~~~--~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv 131 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLV 131 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTTSC--CHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccchhH--HHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEee
Confidence 46888899999999999999764 69999999986542211 122233332 3345555532 2246789
Q ss_pred EEeccCCChhhhhccc-ccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCC-CcEEEeeecCCccc
Q 042123 656 YEFLERGSLAAILNTD-AAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLE-YEAHVADFGIAKSL 733 (849)
Q Consensus 656 ~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~-~~~kl~DfG~a~~~ 733 (849)
|||+++ ++.+.+... .....+++..+..++.||+.||+|||+. +|+||||||+|||++.+ +.+||+|||+++..
T Consensus 132 ~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~ 207 (420)
T 1j1b_A 132 LDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 207 (420)
T ss_dssp EECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred hhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchhhhhc
Confidence 999986 666665432 2235699999999999999999999998 99999999999999965 67899999999876
Q ss_pred CCCCCCeeeccCCccccccccccCC-CCCccchHHHHHHHHHHHHhCCCCCCccccccccc-------ccccccccc---
Q 042123 734 KPDSSNWTEFAGTCGYIAPELAYTM-KITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSS-------LNTDVALDQ--- 802 (849)
Q Consensus 734 ~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~-------~~~~~~~~~--- 802 (849)
.... ......+|+.|+|||++.+. .++.++|||||||++|||++|+.||.......... .........
T Consensus 208 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~ 286 (420)
T 1j1b_A 208 VRGE-PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 286 (420)
T ss_dssp CTTC-CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCS
T ss_pred ccCC-CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhCh
Confidence 5432 23456789999999998764 78999999999999999999999997543211000 000000000
Q ss_pred -ccCCCCCCC-Chhh-----HHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 803 -MLDPRLPAP-SRSA-----QEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 803 -~~~~~~~~~-~~~~-----~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
..+..++.. ...+ ......+.+++.+||+.||++|||+.|+++|
T Consensus 287 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h 337 (420)
T 1j1b_A 287 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337 (420)
T ss_dssp CCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence 000011100 0001 0112458899999999999999999999876
No 280
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=1.4e-33 Score=323.47 Aligned_cols=253 Identities=25% Similarity=0.312 Sum_probs=183.6
Q ss_pred hcCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHHHHH-----------hhceeec------
Q 042123 587 TNDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVEA-----------FYGFCSH------ 648 (849)
Q Consensus 587 ~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~~-----------~~~~~~~------ 648 (849)
.++|++.+.||+|+||.||+|.. .+|+.||||++.... .......+.+|+.. +++++..
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~---~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~ 89 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQEL---SPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAP 89 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCC---CHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCT
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccC---CHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccC
Confidence 37899999999999999999965 568999999986532 23334556666553 3344332
Q ss_pred CCeeEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCc---EEEe
Q 042123 649 ARHSFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYE---AHVA 725 (849)
Q Consensus 649 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~---~kl~ 725 (849)
.+..++||||+++|+|.+++........+++.++..++.|++.||+|||+. +|+||||||+||+++.++. +||+
T Consensus 90 ~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~ 166 (676)
T 3qa8_A 90 NDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKII 166 (676)
T ss_dssp TSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEEC
T ss_pred CCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEc
Confidence 667899999999999999998755445689999999999999999999998 9999999999999997765 9999
Q ss_pred eecCCcccCCCCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccc------cccccccc
Q 042123 726 DFGIAKSLKPDSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISS------SSLNTDVA 799 (849)
Q Consensus 726 DfG~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~------~~~~~~~~ 799 (849)
|||.+....... ......||+.|+|||.+.+..++.++||||+|+++|+|++|+.||........ ........
T Consensus 167 DFG~a~~~~~~~-~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~ 245 (676)
T 3qa8_A 167 DLGYAKELDQGE-LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIV 245 (676)
T ss_dssp SCCCCCBTTSCC-CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CC
T ss_pred cccccccccccc-ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhh
Confidence 999998765432 33456899999999999999999999999999999999999999964311100 00000000
Q ss_pred ccc------ccCCCCCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 800 LDQ------MLDPRLPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 800 ~~~------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
... ......+.+..........+.+++.+||+.||++|||++|++++
T Consensus 246 ~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~h 298 (676)
T 3qa8_A 246 VYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNV 298 (676)
T ss_dssp SCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCC
T ss_pred hhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcC
Confidence 000 01112222222233345568899999999999999999886543
No 281
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=1.7e-33 Score=307.33 Aligned_cols=249 Identities=23% Similarity=0.332 Sum_probs=179.5
Q ss_pred hcCCCcCceecCCccceEEEEEec-CCcEEEEEEecccCCCCchhhHHHHHHHHHH-----------hhceeecC-----
Q 042123 587 TNDFDAKYCIGNGGHASVYRAELP-SGEVVAVKKFHSLLPCDQTVDQKEFLTEVEA-----------FYGFCSHA----- 649 (849)
Q Consensus 587 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~ei~~-----------~~~~~~~~----- 649 (849)
.++|+..+.||+|+||.||+|+.. +|+.||||++... ........+.+|+.. +++++...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 86 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPF---DKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENF 86 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC---SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTC
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeeccc---ccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCcc
Confidence 368899999999999999999654 7899999998643 222233445556543 44444332
Q ss_pred CeeEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecC
Q 042123 650 RHSFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGI 729 (849)
Q Consensus 650 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~ 729 (849)
...++||||++ |+|.+++.. ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 87 ~~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~ 158 (353)
T 2b9h_A 87 NEVYIIQELMQ-TDLHRVIST----QMLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGL 158 (353)
T ss_dssp CCEEEEECCCS-EEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTT
T ss_pred ceEEEEEeccC-ccHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEeccc
Confidence 67899999998 589998864 3489999999999999999999999 999999999999999999999999999
Q ss_pred CcccCCCCCC----------eeeccCCccccccccccC-CCCCccchHHHHHHHHHHHHhCCCCCCcccccccc------
Q 042123 730 AKSLKPDSSN----------WTEFAGTCGYIAPELAYT-MKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSS------ 792 (849)
Q Consensus 730 a~~~~~~~~~----------~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~------ 792 (849)
++........ .....||+.|+|||.+.+ ..++.++|||||||++|||++|+.||.........
T Consensus 159 a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~ 238 (353)
T 2b9h_A 159 ARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGI 238 (353)
T ss_dssp CEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred ccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHH
Confidence 9876532211 223468999999998764 67899999999999999999999999754311000
Q ss_pred ----c------cccccccccccC--CCCCCCC--hhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 793 ----S------LNTDVALDQMLD--PRLPAPS--RSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 793 ----~------~~~~~~~~~~~~--~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
. ........+... +..+... .........+.+++.+||+.||++|||++|++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (353)
T 2b9h_A 239 IGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306 (353)
T ss_dssp HCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0 000000000000 0000000 0001123457899999999999999999999986
No 282
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.3e-33 Score=301.89 Aligned_cols=247 Identities=19% Similarity=0.268 Sum_probs=173.6
Q ss_pred cCCCcCceecCCccceEEEEEec-CCcEEEEEEecccCCCCchhhHHHHHHHHHH-----------hhcee---------
Q 042123 588 NDFDAKYCIGNGGHASVYRAELP-SGEVVAVKKFHSLLPCDQTVDQKEFLTEVEA-----------FYGFC--------- 646 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~ei~~-----------~~~~~--------- 646 (849)
++|+..+.||+|+||.||+|... +++.||||++... .....+.+.+|+.. +++++
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 86 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT----DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTD 86 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECC----SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecC----ChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccc
Confidence 67889999999999999999665 5899999998643 22334556666553 33333
Q ss_pred -----ecCCeeEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeec-CCC
Q 042123 647 -----SHARHSFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLD-LEY 720 (849)
Q Consensus 647 -----~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~-~~~ 720 (849)
.+....++||||++ |+|.+++.. ..+++.++..++.|++.||+|||+. +|+||||||+||+++ .++
T Consensus 87 ~~~~~~~~~~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~ 158 (320)
T 2i6l_A 87 DVGSLTELNSVYIVQEYME-TDLANVLEQ----GPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDL 158 (320)
T ss_dssp ----CCSCSEEEEEEECCS-EEHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTT
T ss_pred ccccccccCceeEEeeccC-CCHHHHhhc----CCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCC
Confidence 34467899999998 599999864 3489999999999999999999999 999999999999997 567
Q ss_pred cEEEeeecCCcccCCCC---CCeeeccCCccccccccccC-CCCCccchHHHHHHHHHHHHhCCCCCCccccccccc---
Q 042123 721 EAHVADFGIAKSLKPDS---SNWTEFAGTCGYIAPELAYT-MKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSS--- 793 (849)
Q Consensus 721 ~~kl~DfG~a~~~~~~~---~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~--- 793 (849)
.+||+|||+++...... .......+++.|+|||.+.+ ..++.++||||||+++|||++|+.||..........
T Consensus 159 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~ 238 (320)
T 2i6l_A 159 VLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLIL 238 (320)
T ss_dssp EEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred eEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 99999999998764321 12234567899999998765 678999999999999999999999997543211000
Q ss_pred ----cccccccccc-----------cCCCCCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 794 ----LNTDVALDQM-----------LDPRLPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 794 ----~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
........+. ..................+.+++.+||+.||++|||++|++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 239 ESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp HHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred HhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 0000000000 0000000000001123458899999999999999999999876
No 283
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=4.6e-32 Score=292.87 Aligned_cols=294 Identities=20% Similarity=0.248 Sum_probs=213.2
Q ss_pred CCCCCCCCEEeCcCCccccCCCccccCCCCCCEeeCCCCcCcccccccccccCCCCCccccCeEeccCCcccccCCccCC
Q 042123 26 FSSFPHLAYLDLTWNGFFGTIPPQISNLSNLRYLYLGSNQFSGNILAEVSSESSGGNLRYMSRLVINDNSLSGFIPPHIG 105 (849)
Q Consensus 26 ~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 105 (849)
+....+++.+++++++++.+ |..+. +.|++|+|++|++++. ....|+++++|++|+|++|.+++..|..|.
T Consensus 27 ~~c~c~l~~l~~~~~~l~~l-p~~~~--~~l~~L~L~~n~i~~~------~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 97 (330)
T 1xku_A 27 FRCQCHLRVVQCSDLGLEKV-PKDLP--PDTALLDLQNNKITEI------KDGDFKNLKNLHTLILINNKISKISPGAFA 97 (330)
T ss_dssp TTCEEETTEEECTTSCCCSC-CCSCC--TTCCEEECCSSCCCCB------CTTTTTTCTTCCEEECCSSCCCCBCTTTTT
T ss_pred CCCcCCCeEEEecCCCcccc-CccCC--CCCeEEECCCCcCCEe------ChhhhccCCCCCEEECCCCcCCeeCHHHhc
Confidence 33445788888888888644 43332 5788888888888742 234567788888888888888877778888
Q ss_pred CCCCCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEEcCCCcccc--cCCcCCCCCCCCC
Q 042123 106 NLKFLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLNDNQLIG--YIPRPFSNLTSVS 183 (849)
Q Consensus 106 ~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~ 183 (849)
++++|++|+|++|+++.+ |..+. ++|++|++++|.+++..+..|.++++|+.|++++|.+.. +.+..|..+++|+
T Consensus 98 ~l~~L~~L~Ls~n~l~~l-~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~ 174 (330)
T 1xku_A 98 PLVKLERLYLSKNQLKEL-PEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLS 174 (330)
T ss_dssp TCTTCCEEECCSSCCSBC-CSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCC
T ss_pred CCCCCCEEECCCCcCCcc-Chhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcC
Confidence 888888888888888743 43333 678888888888877777778888888888888888754 5667778888888
Q ss_pred EEEccCCCCcCcCcccccCCCCCCEEeccCCcCccCCCcCccCccccchhhhccccccCCCCcchhhhhhhhhhccCcCC
Q 042123 184 TLRLSRNDLFGSIPDEIGKMRSLSVLDLNQNQFKGVLPPSISNLTNLKELALLYNHLSGSIPPSLGNLILRQLLLSGNHF 263 (849)
Q Consensus 184 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~L~~n~i 263 (849)
+|++++|+++ .+|..+. ++|++|++++|++++..+..|..+++|++|+|++|.+++.
T Consensus 175 ~L~l~~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~-------------------- 231 (330)
T 1xku_A 175 YIRIADTNIT-TIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAV-------------------- 231 (330)
T ss_dssp EEECCSSCCC-SCCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEE--------------------
T ss_pred EEECCCCccc-cCCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCcee--------------------
Confidence 8888888877 4454443 6788888888888777777777777777777777776643
Q ss_pred CCCCCcccCCCCCcceeeecccccccccCCCCCCcccccEEEccCccccCchhhhhCC------CCCCCEEeccCccccC
Q 042123 264 TGYLPYNICRGGALEIFTVSENHFQGTIPTSLRNCTSLIRVRLNGNNLTGNISEALGI------YPNLTFIDLSRNNFYG 337 (849)
Q Consensus 264 ~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~------l~~L~~L~Ls~N~l~~ 337 (849)
.+..+..+++|+.|++++|+++ .+|..+..+++|++|++++|+|++..+..|.. .+.++.|++++|.+..
T Consensus 232 ---~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~ 307 (330)
T 1xku_A 232 ---DNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQY 307 (330)
T ss_dssp ---CTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCG
T ss_pred ---ChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccc
Confidence 3334555667777777777777 66777777888888888888888777766654 3678888888888863
Q ss_pred --cccccCCCCCCCcEEeccCCc
Q 042123 338 --EISSNWGKFPKLGTLNVSMNN 358 (849)
Q Consensus 338 --~~~~~~~~l~~L~~L~Ls~N~ 358 (849)
..|..|..+.+++.++|++|+
T Consensus 308 ~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 308 WEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp GGSCGGGGTTCCCGGGEEC----
T ss_pred cccCccccccccceeEEEecccC
Confidence 566788888889999988874
No 284
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=3.2e-33 Score=327.28 Aligned_cols=241 Identities=23% Similarity=0.404 Sum_probs=182.8
Q ss_pred hcCCCcCceecCCccceEEEEEec----CCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCe
Q 042123 587 TNDFDAKYCIGNGGHASVYRAELP----SGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARH 651 (849)
Q Consensus 587 ~~~f~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~ 651 (849)
.++|+..+.||+|+||.||+|.+. .+..||||++.... .....+.+.+|+. ++++++. .+.
T Consensus 389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~ 464 (656)
T 2j0j_A 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCT---SDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENP 464 (656)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTT---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSS
T ss_pred cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccC---CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCc
Confidence 467888899999999999999763 25679999876532 2233455666654 3567764 456
Q ss_pred eEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCc
Q 042123 652 SFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAK 731 (849)
Q Consensus 652 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~ 731 (849)
.++||||+++|+|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 465 ~~lv~E~~~~g~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a~ 539 (656)
T 2j0j_A 465 VWIIMELCTLGELRSFLQVRK--FSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 539 (656)
T ss_dssp CEEEEECCTTCBHHHHHHHTT--TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCCC
T ss_pred eEEEEEcCCCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCCe
Confidence 899999999999999996432 3589999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCC-CeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCC-CC
Q 042123 732 SLKPDSS-NWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIK-GKHPRDFLSSISSSSLNTDVALDQMLDP-RL 808 (849)
Q Consensus 732 ~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~-~~ 808 (849)
....... ......+++.|+|||.+.+..++.++||||||+++|||++ |..||...... .....+... ..
T Consensus 540 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~--------~~~~~i~~~~~~ 611 (656)
T 2j0j_A 540 YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--------DVIGRIENGERL 611 (656)
T ss_dssp SCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--------HHHHHHHHTCCC
T ss_pred ecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH--------HHHHHHHcCCCC
Confidence 7654322 1223456789999999998899999999999999999997 99999743321 111111111 11
Q ss_pred CCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 809 PAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 809 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
+.+... ...+.+++.+||+.||++|||+.++++.|+
T Consensus 612 ~~~~~~----~~~l~~li~~~l~~dP~~RPs~~el~~~L~ 647 (656)
T 2j0j_A 612 PMPPNC----PPTLYSLMTKCWAYDPSRRPRFTELKAQLS 647 (656)
T ss_dssp CCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCccc----cHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 111222 234788999999999999999999999874
No 285
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.6e-33 Score=300.19 Aligned_cols=237 Identities=23% Similarity=0.327 Sum_probs=176.5
Q ss_pred HHHhcCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCC--------chhhHHHHHHH---------HHHhhce
Q 042123 584 VKATNDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCD--------QTVDQKEFLTE---------VEAFYGF 645 (849)
Q Consensus 584 ~~~~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--------~~~~~~~~~~e---------i~~~~~~ 645 (849)
....++|+..+.||+|+||.||+|.. .+++.||||++....... ....+...+.. +..++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 44567899999999999999999965 578999999986532111 11112222222 3346777
Q ss_pred eecCCeeEEEEEe-ccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeec-CCCcEE
Q 042123 646 CSHARHSFLLYEF-LERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLD-LEYEAH 723 (849)
Q Consensus 646 ~~~~~~~~lV~e~-~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~-~~~~~k 723 (849)
+...+..++|||| +.+++|.+++... ..+++.++..++.||+.||+|||+. +|+||||||+||+++ .++.+|
T Consensus 107 ~~~~~~~~~v~e~~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~k 180 (312)
T 2iwi_A 107 FETQEGFMLVLERPLPAQDLFDYITEK---GPLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCAK 180 (312)
T ss_dssp C-----CEEEEECCSSEEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEEE
T ss_pred EecCCeEEEEEEecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeEE
Confidence 8788889999999 7899999999653 3589999999999999999999999 999999999999999 789999
Q ss_pred EeeecCCcccCCCCCCeeeccCCccccccccccCCCC-CccchHHHHHHHHHHHHhCCCCCCcccccccccccccccccc
Q 042123 724 VADFGIAKSLKPDSSNWTEFAGTCGYIAPELAYTMKI-TEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQ 802 (849)
Q Consensus 724 l~DfG~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~ 802 (849)
|+|||+++..... ......|++.|+|||++.+..+ +.++||||+|+++|||++|+.||......
T Consensus 181 l~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------------- 245 (312)
T 2iwi_A 181 LIDFGSGALLHDE--PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEI------------- 245 (312)
T ss_dssp ECCCSSCEECCSS--CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHH-------------
T ss_pred EEEcchhhhcccC--cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHHH-------------
Confidence 9999999876543 2345678999999999877666 45899999999999999999998743211
Q ss_pred ccCCCCCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 803 MLDPRLPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
.......+... ...+.+++.+||+.||++|||++|++++
T Consensus 246 -~~~~~~~~~~~----~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 246 -LEAELHFPAHV----SPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp -HHTCCCCCTTS----CHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred -hhhccCCcccC----CHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 11111111111 2247789999999999999999999986
No 286
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=1.9e-33 Score=314.70 Aligned_cols=246 Identities=21% Similarity=0.328 Sum_probs=169.8
Q ss_pred CCCcCceecCCccceEEEEEecCCcEEEEEEecccCCCCchhhHHHHHHH------HHHhhceeecCCeeEEEEEeccCC
Q 042123 589 DFDAKYCIGNGGHASVYRAELPSGEVVAVKKFHSLLPCDQTVDQKEFLTE------VEAFYGFCSHARHSFLLYEFLERG 662 (849)
Q Consensus 589 ~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e------i~~~~~~~~~~~~~~lV~e~~~~g 662 (849)
.|...+.||+|+||+||.+...+|+.||||++..... .....+...+++ |.++++++......++||||++ |
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~~-~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-g 93 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFC-DIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-L 93 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGGH-HHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-E
T ss_pred eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHHH-HHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-C
Confidence 3445678999999999877666799999999864311 011111122222 2346777788889999999996 5
Q ss_pred Chhhhhccccccc----CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCC-------------CcEEEe
Q 042123 663 SLAAILNTDAAAQ----ELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLE-------------YEAHVA 725 (849)
Q Consensus 663 sL~~~l~~~~~~~----~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~-------------~~~kl~ 725 (849)
+|.+++....... ..++..+..++.||+.||+|||+. +|+||||||+||+++.+ +.+||+
T Consensus 94 sL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~ 170 (434)
T 2rio_A 94 NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILIS 170 (434)
T ss_dssp EHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEEC
T ss_pred CHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCceEEEEc
Confidence 9999997543211 113345678999999999999999 99999999999999754 489999
Q ss_pred eecCCcccCCCCCC----eeeccCCccccccccccC-------CCCCccchHHHHHHHHHHHHh-CCCCCCccccccccc
Q 042123 726 DFGIAKSLKPDSSN----WTEFAGTCGYIAPELAYT-------MKITEKCDVYSFGVLMWEVIK-GKHPRDFLSSISSSS 793 (849)
Q Consensus 726 DfG~a~~~~~~~~~----~~~~~g~~~y~aPE~~~~-------~~~~~~~Dv~SlGvil~el~t-g~~Pf~~~~~~~~~~ 793 (849)
|||+++........ .....||+.|+|||++.+ ..++.++|||||||++|||++ |+.||.......
T Consensus 171 DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~--- 247 (434)
T 2rio_A 171 DFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE--- 247 (434)
T ss_dssp CCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH---
T ss_pred ccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH---
Confidence 99999877543321 234579999999999865 678999999999999999999 999996432110
Q ss_pred cccccccccccCCCCCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 794 LNTDVALDQMLDPRLPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
............. ...........+.+++.+||+.||++|||+.|+++|
T Consensus 248 ---~~i~~~~~~~~~~-~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 296 (434)
T 2rio_A 248 ---SNIIRGIFSLDEM-KCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRH 296 (434)
T ss_dssp ---HHHHHTCCCCCCC-TTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ---HHHhcCCCCcccc-cccccccchHHHHHHHHHHhhCChhhCCCHHHHHhC
Confidence 0111111111100 011122344568899999999999999999999875
No 287
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=5e-33 Score=298.92 Aligned_cols=240 Identities=22% Similarity=0.340 Sum_probs=164.4
Q ss_pred hcCCCcCceecCCccceEEEEEec-CCcEEEEEEecccCCCCchhhHHHHHHH------------HHHhhceeecCCeeE
Q 042123 587 TNDFDAKYCIGNGGHASVYRAELP-SGEVVAVKKFHSLLPCDQTVDQKEFLTE------------VEAFYGFCSHARHSF 653 (849)
Q Consensus 587 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e------------i~~~~~~~~~~~~~~ 653 (849)
.++|+..+.||+|+||.||+|... +|+.||||++..... .........+ +.++++++...+..+
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~ 100 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGN---KEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVF 100 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSC---HHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEeccccc---chHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEE
Confidence 367888999999999999999664 799999999875421 1112222222 224677888889999
Q ss_pred EEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCccc
Q 042123 654 LLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSL 733 (849)
Q Consensus 654 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~ 733 (849)
+||||+ ++.+..+.... ...+++.++..++.|++.||+|||+.. +|+||||||+||+++.++.+||+|||++...
T Consensus 101 lv~e~~-~~~~~~l~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~ 175 (318)
T 2dyl_A 101 IAMELM-GTCAEKLKKRM--QGPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGQIKLCDFGISGRL 175 (318)
T ss_dssp EEECCC-SEEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHHH--CCCCCCCCGGGEEECTTSCEEECCCTTC---
T ss_pred EEEecc-CCcHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHhhC--CEEeCCCCHHHEEECCCCCEEEEECCCchhc
Confidence 999999 44555554322 245899999999999999999999832 8999999999999999999999999999766
Q ss_pred CCCCCCeeeccCCcccccccccc-----CCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCC--
Q 042123 734 KPDSSNWTEFAGTCGYIAPELAY-----TMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDP-- 806 (849)
Q Consensus 734 ~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~-- 806 (849)
.... ......+++.|+|||.+. ...++.++||||||+++|||++|+.||...... ..........
T Consensus 176 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-------~~~~~~~~~~~~ 247 (318)
T 2dyl_A 176 VDDK-AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTD-------FEVLTKVLQEEP 247 (318)
T ss_dssp ------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSH-------HHHHHHHHHSCC
T ss_pred cCCc-cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCcc-------HHHHHHHhccCC
Confidence 5432 234457899999999984 556889999999999999999999999743211 1111111111
Q ss_pred -CCCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 807 -RLPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 807 -~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
..+..... ...+.+++.+||+.||.+|||+++++++
T Consensus 248 ~~~~~~~~~----~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 248 PLLPGHMGF----SGDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp CCCCSSSCC----CHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred CCCCccCCC----CHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 11111111 2247889999999999999999999875
No 288
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=3.7e-33 Score=298.33 Aligned_cols=249 Identities=29% Similarity=0.454 Sum_probs=188.4
Q ss_pred CcEEEEecCCCceee--eeCCccCCCCCCCCEEeCcC-CccccCCCccccCCCCCCEeeCCCCcCcccccccccccCCCC
Q 042123 5 GRVINISLPNIGVNG--TLHDFSFSSFPHLAYLDLTW-NGFFGTIPPQISNLSNLRYLYLGSNQFSGNILAEVSSESSGG 81 (849)
Q Consensus 5 ~~~~~~~~~~~~~~~--~l~~~~~~~l~~L~~L~L~~-n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~ 81 (849)
|+|+.++++.+++.| .+.+ .|..+++|++|+|++ |++.+.+|..|+++++|++|+|++|++++.++. .++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~-~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~------~~~ 122 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPS-SLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPD------FLS 122 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCG-GGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCG------GGG
T ss_pred ceEEEEECCCCCccCCcccCh-hHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCH------HHh
Confidence 778888888888877 5554 677788888888884 778777888888888888888888887654333 345
Q ss_pred CccccCeEeccCCcccccCCccCCCCCCCCEEEccCCcccCCCCCCCcCCC-CCceeeccCcccccccccccCCCCCCCE
Q 042123 82 NLRYMSRLVINDNSLSGFIPPHIGNLKFLSQLDLTNNKFSGPIPLSFDNLS-NLIFLYLYGNLLSGSILSSLGKLKSLFD 160 (849)
Q Consensus 82 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 160 (849)
.+++|++|+|++|.+++.+|..|.++++|++|+|++|++++..|..|..++ +|++|++++|++++..|..|..++ |+.
T Consensus 123 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~ 201 (313)
T 1ogq_A 123 QIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAF 201 (313)
T ss_dssp GCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSE
T ss_pred CCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccE
Confidence 677888888888888777777788888888888888888777777777776 788888888888777777777776 888
Q ss_pred EEcCCCcccccCCcCCCCCCCCCEEEccCCCCcCcCcccccCCCCCCEEeccCCcCccCCCcCccCccccchhhhccccc
Q 042123 161 LQLNDNQLIGYIPRPFSNLTSVSTLRLSRNDLFGSIPDEIGKMRSLSVLDLNQNQFKGVLPPSISNLTNLKELALLYNHL 240 (849)
Q Consensus 161 L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 240 (849)
|+|++|++.+..|..|..+++|++|+|++|++++..|. +..+++|++|+|++|++++.+|..|..+++|++|+|++|++
T Consensus 202 L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 280 (313)
T 1ogq_A 202 VDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNL 280 (313)
T ss_dssp EECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEE
T ss_pred EECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcc
Confidence 88888888777777788888888888888887755554 67778888888888888777777788888888888888887
Q ss_pred cCCCCcchhhhhhhhhhccCcC
Q 042123 241 SGSIPPSLGNLILRQLLLSGNH 262 (849)
Q Consensus 241 ~~~~p~~~~~~~L~~L~L~~n~ 262 (849)
++.+|.......|+.+++++|+
T Consensus 281 ~~~ip~~~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 281 CGEIPQGGNLQRFDVSAYANNK 302 (313)
T ss_dssp EEECCCSTTGGGSCGGGTCSSS
T ss_pred cccCCCCccccccChHHhcCCC
Confidence 7777765222346666666665
No 289
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.1e-33 Score=311.80 Aligned_cols=243 Identities=21% Similarity=0.308 Sum_probs=173.0
Q ss_pred cCCCcCceecCCccceEEEEEecCCcEEEEEEecccCCCCchhhHHHHHHH------HHHhhceeecCCeeEEEEEeccC
Q 042123 588 NDFDAKYCIGNGGHASVYRAELPSGEVVAVKKFHSLLPCDQTVDQKEFLTE------VEAFYGFCSHARHSFLLYEFLER 661 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e------i~~~~~~~~~~~~~~lV~e~~~~ 661 (849)
.+|...+.||+|+||+||.....+++.||||++...... ....+...+++ |.++++++.+....++||||++
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~-~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~- 101 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFS-FADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA- 101 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEE-ECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHH-HHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-
Confidence 468888999999999976555557999999998653221 12223333333 3457788888899999999997
Q ss_pred CChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCC-----CcEEEeeecCCcccCCC
Q 042123 662 GSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLE-----YEAHVADFGIAKSLKPD 736 (849)
Q Consensus 662 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~-----~~~kl~DfG~a~~~~~~ 736 (849)
|+|.+++.... ...++.++..++.||+.||+|||+. +|+||||||+||+++.+ ..+||+|||+++.....
T Consensus 102 g~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~ 176 (432)
T 3p23_A 102 ATLQEYVEQKD--FAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVG 176 (432)
T ss_dssp EEHHHHHHSSS--CCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC---
T ss_pred CCHHHHHHhcC--CCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCC
Confidence 59999987544 2345556789999999999999999 99999999999999532 35889999999876543
Q ss_pred C---CCeeeccCCcccccccccc---CCCCCccchHHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCC
Q 042123 737 S---SNWTEFAGTCGYIAPELAY---TMKITEKCDVYSFGVLMWEVIK-GKHPRDFLSSISSSSLNTDVALDQMLDPRLP 809 (849)
Q Consensus 737 ~---~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~SlGvil~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 (849)
. .......||+.|+|||++. ...++.++||||+||++|||++ |..||....... ..........
T Consensus 177 ~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~---------~~~~~~~~~~ 247 (432)
T 3p23_A 177 RHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQ---------ANILLGACSL 247 (432)
T ss_dssp ---------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHH---------HHHHTTCCCC
T ss_pred CcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHH---------HHHHhccCCc
Confidence 2 2234467999999999987 4567889999999999999999 999986322110 0111111000
Q ss_pred CCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 810 APSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 810 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
............+.+++.+||+.||++|||++|+++|
T Consensus 248 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~h 284 (432)
T 3p23_A 248 DCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKH 284 (432)
T ss_dssp TTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred cccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHhC
Confidence 0011111223347789999999999999999999976
No 290
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=4.3e-33 Score=303.95 Aligned_cols=245 Identities=20% Similarity=0.284 Sum_probs=176.8
Q ss_pred cCCCcCceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHHHHHHH-----------hhceeecCC-----
Q 042123 588 NDFDAKYCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFLTEVEA-----------FYGFCSHAR----- 650 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~~-----------~~~~~~~~~----- 650 (849)
++|...+.||+|+||.||+|.. .+|+.||||++.... ........+.+|+.. +++++....
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 101 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF--QSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 101 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTT--SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccc--cchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccc
Confidence 6788999999999999999965 479999999987532 222234455555442 556665543
Q ss_pred -eeEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecC
Q 042123 651 -HSFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGI 729 (849)
Q Consensus 651 -~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~ 729 (849)
..++||||++ |+|.+++.. .+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 102 ~~~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~ 172 (353)
T 3coi_A 102 YDFYLVMPFMQ-TDLQKIMGL-----KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGL 172 (353)
T ss_dssp CCCEEEEECCS-EEGGGTTTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTC
T ss_pred eeEEEEecccc-CCHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeeccc
Confidence 3499999998 588887742 489999999999999999999999 999999999999999999999999999
Q ss_pred CcccCCCCCCeeeccCCccccccccccC-CCCCccchHHHHHHHHHHHHhCCCCCCccccccccc-------cccccc--
Q 042123 730 AKSLKPDSSNWTEFAGTCGYIAPELAYT-MKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSS-------LNTDVA-- 799 (849)
Q Consensus 730 a~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~-------~~~~~~-- 799 (849)
++..... .....+|+.|+|||.+.+ ..++.++||||+|+++|||++|+.||.......... ......
T Consensus 173 ~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 249 (353)
T 3coi_A 173 ARHADAE---MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQ 249 (353)
T ss_dssp TTC-----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHT
T ss_pred ccCCCCC---ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 9865432 344578999999999876 678999999999999999999999997543211000 000000
Q ss_pred ----------cccccCCCCCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 800 ----------LDQMLDPRLPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 800 ----------~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
......................+.+++.+||+.||++|||++|+++|
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 250 KLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp TCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 00000000000000111223358899999999999999999999876
No 291
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=3.8e-33 Score=310.07 Aligned_cols=234 Identities=15% Similarity=0.127 Sum_probs=169.2
Q ss_pred cCCCcCceecCCccceEEEEE-ecCCcEEEEEEecccCCCCchhhHHHHHHHHHHhhce---------------------
Q 042123 588 NDFDAKYCIGNGGHASVYRAE-LPSGEVVAVKKFHSLLPCDQTVDQKEFLTEVEAFYGF--------------------- 645 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~~~~~~--------------------- 645 (849)
..|...+.||+|+||.||+|+ ..+|+.||||++....... ....+.+.+|+..+...
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~-~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPP-SNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC-----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCcc-HHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence 457778899999999999996 5579999999987432221 11223344443321100
Q ss_pred ------------eec-----CCeeEEEEEeccCCChhhhhccc----ccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCe
Q 042123 646 ------------CSH-----ARHSFLLYEFLERGSLAAILNTD----AAAQELGWSQRMNVIKAVAHALSYLHHDCFPPI 704 (849)
Q Consensus 646 ------------~~~-----~~~~~lV~e~~~~gsL~~~l~~~----~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~i 704 (849)
+.. ....+++|+++ +++|.+++... .....+++..+..++.||+.||+|||+. +|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 232 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 232 (413)
T ss_dssp EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---Cc
Confidence 011 12346667665 57999988421 1123478889999999999999999999 99
Q ss_pred EecCCCCCCeeecCCCcEEEeeecCCcccCCCCCCeeeccCCccccccccc----------cCCCCCccchHHHHHHHHH
Q 042123 705 VHRDISSKNLLLDLEYEAHVADFGIAKSLKPDSSNWTEFAGTCGYIAPELA----------YTMKITEKCDVYSFGVLMW 774 (849)
Q Consensus 705 vH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~g~~~y~aPE~~----------~~~~~~~~~Dv~SlGvil~ 774 (849)
+||||||+|||++.++.+||+|||+++..... .....| +.|+|||++ .+..++.++|||||||++|
T Consensus 233 iHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~---~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ 308 (413)
T 3dzo_A 233 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS---AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIY 308 (413)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTEE---ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHH
T ss_pred ccCCcccceEEEecCCeEEEEeccceeecCCc---cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHH
Confidence 99999999999999999999999998865432 344567 999999998 5556889999999999999
Q ss_pred HHHhCCCCCCccccccccccccccccccccCCCCCCCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 775 EVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPAPSRSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 775 el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
||++|+.||....... .....+..... .+ ..+.+++.+||+.||++|||+.+++++
T Consensus 309 elltg~~Pf~~~~~~~--------~~~~~~~~~~~----~~----~~~~~li~~~l~~dP~~Rpt~~~~l~~ 364 (413)
T 3dzo_A 309 WIWCADLPNTDDAALG--------GSEWIFRSCKN----IP----QPVRALLEGFLRYPKEDRLLPLQAMET 364 (413)
T ss_dssp HHHHSSCCCCTTGGGS--------CSGGGGSSCCC----CC----HHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HHHHCCCCCCCcchhh--------hHHHHHhhccc----CC----HHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 9999999997433211 11112221111 11 347889999999999999999988765
No 292
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.98 E-value=1.6e-36 Score=344.19 Aligned_cols=360 Identities=20% Similarity=0.151 Sum_probs=221.9
Q ss_pred CCCCEEeCcCCccccCCCcc-ccCCCCCCEeeCCCCcCcccccccccccCCCCCccccCeEeccCCcccccCCccC-CCC
Q 042123 30 PHLAYLDLTWNGFFGTIPPQ-ISNLSNLRYLYLGSNQFSGNILAEVSSESSGGNLRYMSRLVINDNSLSGFIPPHI-GNL 107 (849)
Q Consensus 30 ~~L~~L~L~~n~i~~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~-~~l 107 (849)
++|++|||++|++....... +..+++|++|+|++|++++.....+ ...+..+++|++|+|++|.+.+..+..+ ..+
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l--~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l 80 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDI--SSALRVNPALAELNLRSNELGDVGVHCVLQGL 80 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHH--HHHHHTCTTCCEEECTTCCCHHHHHHHHHHTT
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHH--HHHHHhCCCcCEEeCCCCcCChHHHHHHHHHH
Confidence 45677777777775544433 6667777777777777664322211 1223445667777777776664333222 223
Q ss_pred C----CCCEEEccCCcccC----CCCCCCcCCCCCceeeccCccccccccccc-----CCCCCCCEEEcCCCcccccC--
Q 042123 108 K----FLSQLDLTNNKFSG----PIPLSFDNLSNLIFLYLYGNLLSGSILSSL-----GKLKSLFDLQLNDNQLIGYI-- 172 (849)
Q Consensus 108 ~----~L~~L~Ls~n~i~~----~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~-----~~l~~L~~L~L~~N~l~~~~-- 172 (849)
+ +|++|+|++|+|+. .++..|..+++|++|+|++|.++...+..+ ...++|++|+|++|++++..
T Consensus 81 ~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~ 160 (461)
T 1z7x_W 81 QTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCE 160 (461)
T ss_dssp CSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHH
T ss_pred hhCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHH
Confidence 3 57777777777763 336667777777777777777764333322 23456777777777776533
Q ss_pred --CcCCCCCCCCCEEEccCCCCcCcCccccc-----CCCCCCEEeccCCcCccC----CCcCccCccccchhhhcccccc
Q 042123 173 --PRPFSNLTSVSTLRLSRNDLFGSIPDEIG-----KMRSLSVLDLNQNQFKGV----LPPSISNLTNLKELALLYNHLS 241 (849)
Q Consensus 173 --~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~-----~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~ 241 (849)
+..+..+++|++|+|++|++....+..+. ..++|++|++++|.++.. ++..+..+++|++|++++|.++
T Consensus 161 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~ 240 (461)
T 1z7x_W 161 PLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLG 240 (461)
T ss_dssp HHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCH
T ss_pred HHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCC
Confidence 34455567777777777777644333333 245777777777777642 3455566677777777777664
Q ss_pred CCCCcchhhhhhhhhhccCcCCCCCCCcccCCCCCcceeeecccccccc----cCCCCCCcccccEEEccCccccCchhh
Q 042123 242 GSIPPSLGNLILRQLLLSGNHFTGYLPYNICRGGALEIFTVSENHFQGT----IPTSLRNCTSLIRVRLNGNNLTGNISE 317 (849)
Q Consensus 242 ~~~p~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~N~l~~~----~~~~~~~l~~L~~L~L~~n~l~~~~~~ 317 (849)
......+. +..+..+++|+.|++++|.++.. ++..+..+++|++|++++|.+++..+.
T Consensus 241 ~~~~~~l~------------------~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~ 302 (461)
T 1z7x_W 241 DVGMAELC------------------PGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGAR 302 (461)
T ss_dssp HHHHHHHH------------------HHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHH
T ss_pred hHHHHHHH------------------HHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHH
Confidence 21111000 01112345677777777777653 455566677788888888877654443
Q ss_pred hhC-----CCCCCCEEeccCccccCc----ccccCCCCCCCcEEeccCCccccCCCCCccc-----cccccccccccccc
Q 042123 318 ALG-----IYPNLTFIDLSRNNFYGE----ISSNWGKFPKLGTLNVSMNNITGGLPREIGN-----SSQLQAFDLSLNHI 383 (849)
Q Consensus 318 ~~~-----~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~-----l~~L~~L~L~~N~i 383 (849)
.+. ..++|+.|+|++|.+++. ++..+..+++|++|++++|.+++..+..+.. .++|+.|+|++|.+
T Consensus 303 ~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i 382 (461)
T 1z7x_W 303 LLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDV 382 (461)
T ss_dssp HHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCC
T ss_pred HHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCC
Confidence 333 235788888888877754 3445556677888888888777554444432 45788888888887
Q ss_pred cc----cCchhhcCCCCCcEEEccCccccc
Q 042123 384 VG----EIPKELGKLNPLTKLILRGNQITG 409 (849)
Q Consensus 384 ~~----~~~~~~~~l~~L~~L~L~~N~l~~ 409 (849)
++ .+|..+..+++|++|+|++|++++
T Consensus 383 ~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~ 412 (461)
T 1z7x_W 383 SDSSCSSLAATLLANHSLRELDLSNNCLGD 412 (461)
T ss_dssp CHHHHHHHHHHHHHCCCCCEEECCSSSCCH
T ss_pred ChhhHHHHHHHHHhCCCccEEECCCCCCCH
Confidence 75 567777778888888888887764
No 293
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.98 E-value=1.7e-32 Score=293.18 Aligned_cols=251 Identities=25% Similarity=0.402 Sum_probs=153.0
Q ss_pred hhhhccCcCCCC--CCCcccCCCCCcceeeecc-cccccccCCCCCCcccccEEEccCccccCchhhhhCCCCCCCEEec
Q 042123 254 RQLLLSGNHFTG--YLPYNICRGGALEIFTVSE-NHFQGTIPTSLRNCTSLIRVRLNGNNLTGNISEALGIYPNLTFIDL 330 (849)
Q Consensus 254 ~~L~L~~n~i~~--~~~~~~~~~~~L~~L~l~~-N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 330 (849)
+.|+|++|.+++ .+|..+..+++|++|++++ |.+.+.+|..|.++++|++|++++|++++..|..+..+++|++|+|
T Consensus 53 ~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 132 (313)
T 1ogq_A 53 NNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDF 132 (313)
T ss_dssp EEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEEC
T ss_pred EEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeC
Confidence 333344444443 3444444445555555552 5555555555555555555555555555455555555555555555
Q ss_pred cCccccCcccccCCCCCCCcEEeccCCccccCCCCCccccc-cccccccccccccccCchhhcCCCCCcEEEccCccccc
Q 042123 331 SRNNFYGEISSNWGKFPKLGTLNVSMNNITGGLPREIGNSS-QLQAFDLSLNHIVGEIPKELGKLNPLTKLILRGNQITG 409 (849)
Q Consensus 331 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~-~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~ 409 (849)
++|++.+.+|..|..+++|++|++++|.+++.+|..+..+. +|+.|++++|++++.+|..|..++ |+.|+|++|++++
T Consensus 133 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~ 211 (313)
T 1ogq_A 133 SYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEG 211 (313)
T ss_dssp CSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEE
T ss_pred CCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccC
Confidence 55555555555555555555555555555555555555554 555555555555555555555554 5555555555555
Q ss_pred cCccccccccccccccccc--CCCCChhhhcccccceeccCCcccccCCCccccccCCCcEEeccCCccccCCCCCcccc
Q 042123 410 RLPKEIGSLTKLEYLDFSA--IGELPSQICNMKSLEKLNLSHNNLSGSIPSCFEGMHGLSFIDMSYNELQCPVPNSTTFR 487 (849)
Q Consensus 410 ~~p~~~~~l~~L~~L~l~~--l~~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~ 487 (849)
..|..|..+++|++|+++. +...++.+..+++|+.|+|++|++++.+|..|..+++|+.|+|++|++++.+|....+.
T Consensus 212 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~l~ 291 (313)
T 1ogq_A 212 DASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQ 291 (313)
T ss_dssp CCGGGCCTTSCCSEEECCSSEECCBGGGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGG
T ss_pred cCCHHHhcCCCCCEEECCCCceeeecCcccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCCcccc
Confidence 5555555555555555543 23333345667788899999999998999999999999999999999999998887777
Q ss_pred cCcccccccCCCccCCCC
Q 042123 488 GASVEALKGNKGLCGSAK 505 (849)
Q Consensus 488 ~~~~~~~~~~~~~c~~~~ 505 (849)
......+.+|+.+||.+.
T Consensus 292 ~L~~l~l~~N~~lc~~p~ 309 (313)
T 1ogq_A 292 RFDVSAYANNKCLCGSPL 309 (313)
T ss_dssp GSCGGGTCSSSEEESTTS
T ss_pred ccChHHhcCCCCccCCCC
Confidence 777778889999998753
No 294
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.97 E-value=2.6e-32 Score=290.39 Aligned_cols=226 Identities=20% Similarity=0.294 Sum_probs=164.2
Q ss_pred cCCCcC-ceecCCccceEEEEEe-cCCcEEEEEEecccCCCCchhhHHHHH-H-----HHHHhhceeec----CCeeEEE
Q 042123 588 NDFDAK-YCIGNGGHASVYRAEL-PSGEVVAVKKFHSLLPCDQTVDQKEFL-T-----EVEAFYGFCSH----ARHSFLL 655 (849)
Q Consensus 588 ~~f~~~-~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~-~-----ei~~~~~~~~~----~~~~~lV 655 (849)
++|... +.||+|+||.||+|.. .+++.||||++.... ....+.... + .+..+++++.. ....++|
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv 93 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCP---KARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIV 93 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSH---HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecccH---HHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEE
Confidence 567776 7899999999999965 578999999986421 111111111 1 12235666655 6678999
Q ss_pred EEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecC---CCcEEEeeecCCcc
Q 042123 656 YEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDL---EYEAHVADFGIAKS 732 (849)
Q Consensus 656 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~DfG~a~~ 732 (849)
|||+++|+|.+++.... ...+++.++..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||++..
T Consensus 94 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 169 (299)
T 3m2w_A 94 MECLDGGELFSRIQDRG-DQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE 169 (299)
T ss_dssp ECCCCSCBHHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred EeecCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEeccccccc
Confidence 99999999999997543 24589999999999999999999999 9999999999999998 78999999999865
Q ss_pred cCCCCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCC
Q 042123 733 LKPDSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPAPS 812 (849)
Q Consensus 733 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (849)
.. +..++.++||||+||++|||++|+.||......... ..............+.
T Consensus 170 ~~----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~----~~~~~~~~~~~~~~~~ 223 (299)
T 3m2w_A 170 TT----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS----PGMKTRIRMGQYEFPN 223 (299)
T ss_dssp CT----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-----------CCSCCSSCTTCCSSCH
T ss_pred cc----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhh----HHHHHHHhhccccCCc
Confidence 32 235678999999999999999999999744322110 0011111111111111
Q ss_pred hhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHhh
Q 042123 813 RSAQEKLISIMEVAFSCFNESPESRPTMKIISQQ 846 (849)
Q Consensus 813 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 846 (849)
.........+.+++.+||+.||++|||++|+++|
T Consensus 224 ~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 224 PEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 1111233458899999999999999999999986
No 295
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=1.2e-35 Score=337.14 Aligned_cols=386 Identities=16% Similarity=0.127 Sum_probs=280.4
Q ss_pred cEEEEecCCCceeeeeCCccCCCCCCCCEEeCcCCcccc----CCCccccCCCCCCEeeCCCCcCcccccccccccCCCC
Q 042123 6 RVINISLPNIGVNGTLHDFSFSSFPHLAYLDLTWNGFFG----TIPPQISNLSNLRYLYLGSNQFSGNILAEVSSESSGG 81 (849)
Q Consensus 6 ~~~~~~~~~~~~~~~l~~~~~~~l~~L~~L~L~~n~i~~----~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~ 81 (849)
+++.++++.+.+........|..+++|++|+|++|++.+ .++..+..+++|++|+|++|++++..+..+. .
T Consensus 4 ~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~-----~ 78 (461)
T 1z7x_W 4 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVL-----Q 78 (461)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHH-----H
T ss_pred cceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHH-----H
Confidence 578899988887655433337889999999999999974 3567788999999999999999764443332 2
Q ss_pred Ccc----ccCeEeccCCcccc----cCCccCCCCCCCCEEEccCCcccCCCCCC-----CcCCCCCceeeccCccccccc
Q 042123 82 NLR----YMSRLVINDNSLSG----FIPPHIGNLKFLSQLDLTNNKFSGPIPLS-----FDNLSNLIFLYLYGNLLSGSI 148 (849)
Q Consensus 82 ~l~----~L~~L~l~~n~l~~----~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~-----~~~l~~L~~L~L~~N~l~~~~ 148 (849)
.++ +|++|+|++|.++. .++..+.++++|++|+|++|++++..+.. +...++|++|+|++|.++...
T Consensus 79 ~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~ 158 (461)
T 1z7x_W 79 GLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAAS 158 (461)
T ss_dssp TTCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGG
T ss_pred HHhhCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHH
Confidence 233 79999999999984 45888999999999999999998543333 334678999999999998643
Q ss_pred ----ccccCCCCCCCEEEcCCCcccccCCcCCC-----CCCCCCEEEccCCCCcCc----CcccccCCCCCCEEeccCCc
Q 042123 149 ----LSSLGKLKSLFDLQLNDNQLIGYIPRPFS-----NLTSVSTLRLSRNDLFGS----IPDEIGKMRSLSVLDLNQNQ 215 (849)
Q Consensus 149 ----~~~~~~l~~L~~L~L~~N~l~~~~~~~~~-----~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~L~~N~ 215 (849)
+..+..+++|++|+|++|.+....+..+. ..++|++|+|++|.++.. ++..+..+++|++|++++|+
T Consensus 159 ~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~ 238 (461)
T 1z7x_W 159 CEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNK 238 (461)
T ss_dssp HHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSB
T ss_pred HHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCc
Confidence 56677789999999999998875444443 367999999999999853 47778889999999999999
Q ss_pred CccCC-----CcCccCccccchhhhccccccCCCCcchhhhhhhhhhccCcCCCCCCCcccCCCCCcceeeecccccccc
Q 042123 216 FKGVL-----PPSISNLTNLKELALLYNHLSGSIPPSLGNLILRQLLLSGNHFTGYLPYNICRGGALEIFTVSENHFQGT 290 (849)
Q Consensus 216 l~~~~-----~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~N~l~~~ 290 (849)
++... +..+..+++|++|++++|.++...... ++..+..+++|+.|++++|.+.+.
T Consensus 239 l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~-------------------l~~~l~~~~~L~~L~Ls~n~i~~~ 299 (461)
T 1z7x_W 239 LGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGD-------------------LCRVLRAKESLKELSLAGNELGDE 299 (461)
T ss_dssp CHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHH-------------------HHHHHHHCTTCCEEECTTCCCHHH
T ss_pred CChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHH-------------------HHHHHhhCCCcceEECCCCCCchH
Confidence 87532 223345788999999998876321000 122233345677777777776544
Q ss_pred cCCCCCC-----cccccEEEccCccccCc----hhhhhCCCCCCCEEeccCccccCcccccCCC-----CCCCcEEeccC
Q 042123 291 IPTSLRN-----CTSLIRVRLNGNNLTGN----ISEALGIYPNLTFIDLSRNNFYGEISSNWGK-----FPKLGTLNVSM 356 (849)
Q Consensus 291 ~~~~~~~-----l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-----l~~L~~L~Ls~ 356 (849)
.+..+.. .++|+.|++++|.+++. .+..+..+++|+.|+|++|++.+..+..+.. .++|++|++++
T Consensus 300 ~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~ 379 (461)
T 1z7x_W 300 GARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLAD 379 (461)
T ss_dssp HHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTT
T ss_pred HHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCC
Confidence 3333322 25788888888888754 4556667788888888888887654443332 56888888888
Q ss_pred Ccccc----CCCCCccccccccccccccccccccCchhhc-----CCCCCcEEEccCccccccCcccc
Q 042123 357 NNITG----GLPREIGNSSQLQAFDLSLNHIVGEIPKELG-----KLNPLTKLILRGNQITGRLPKEI 415 (849)
Q Consensus 357 N~i~~----~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~-----~l~~L~~L~L~~N~l~~~~p~~~ 415 (849)
|.+++ .+|..+..+++|++|+|++|++++.....+. ...+|+.|.+.++.+....+..+
T Consensus 380 n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~~~~~l~~~l~~~~~~L~~L~~~~~~~~~~~~~~l 447 (461)
T 1z7x_W 380 CDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSEEMEDRL 447 (461)
T ss_dssp SCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCCHHHHHHH
T ss_pred CCCChhhHHHHHHHHHhCCCccEEECCCCCCCHHHHHHHHHHhccCCcchhheeecccccCHHHHHHH
Confidence 88875 5677777788888888888888754322222 24468888888877765444433
No 296
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.97 E-value=1.7e-31 Score=281.37 Aligned_cols=219 Identities=11% Similarity=0.084 Sum_probs=165.1
Q ss_pred cCCCcCceecCCccceEEEEEec-CCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCeeEEE
Q 042123 588 NDFDAKYCIGNGGHASVYRAELP-SGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARHSFLL 655 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~~~lV 655 (849)
++|++.+.||+|+||.||+|... +++.||||.+....... ....+.+.+|+. ++++++...+..|+|
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 109 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLP-DDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV 109 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSC-HHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccC-HHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence 57999999999999999999664 58999999987643322 223345566544 367788888899999
Q ss_pred EEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccCC
Q 042123 656 YEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLKP 735 (849)
Q Consensus 656 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~~ 735 (849)
|||+++++|.+++... ....++.+++.|++.||+|||+. +|+||||||+||+++.++.+||+++|
T Consensus 110 ~e~~~g~~L~~~l~~~-----~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~------- 174 (286)
T 3uqc_A 110 AEWIRGGSLQEVADTS-----PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA------- 174 (286)
T ss_dssp EECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC-------
T ss_pred EEecCCCCHHHHHhcC-----CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc-------
Confidence 9999999999998532 45667899999999999999999 99999999999999999999998543
Q ss_pred CCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCChhh
Q 042123 736 DSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPAPSRSA 815 (849)
Q Consensus 736 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 815 (849)
|++ .++.++|||||||++|||++|+.||......... .............+....
T Consensus 175 -------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 229 (286)
T 3uqc_A 175 -------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGL-----APAERDTAGQPIEPADID 229 (286)
T ss_dssp -------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCS-----EECCBCTTSCBCCHHHHC
T ss_pred -------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhh-----HHHHHHhccCCCChhhcc
Confidence 233 3678999999999999999999999854322100 000111111111111111
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhc
Q 042123 816 QEKLISIMEVAFSCFNESPESRPTMKIISQQLR 848 (849)
Q Consensus 816 ~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 848 (849)
......+.+++.+||+.||++| |++|+++.|+
T Consensus 230 ~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~ 261 (286)
T 3uqc_A 230 RDIPFQISAVAARSVQGDGGIR-SASTLLNLMQ 261 (286)
T ss_dssp TTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHcccCCccC-CHHHHHHHHH
Confidence 1223458899999999999999 9999999874
No 297
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.97 E-value=1.8e-31 Score=288.98 Aligned_cols=237 Identities=16% Similarity=0.117 Sum_probs=173.0
Q ss_pred hcCCCcCceecCCccceEEEEEecCCcEEEEEEecccCCCC----chhhHHHHHH-------------------------
Q 042123 587 TNDFDAKYCIGNGGHASVYRAELPSGEVVAVKKFHSLLPCD----QTVDQKEFLT------------------------- 637 (849)
Q Consensus 587 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~----~~~~~~~~~~------------------------- 637 (849)
.++|+..+.||+|+||+||+|+. +|+.||||++....... .....+.+.+
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 36788999999999999999987 68999999997543210 0111122222
Q ss_pred ------------HHHHhhceeec-------------CCeeEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHH
Q 042123 638 ------------EVEAFYGFCSH-------------ARHSFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHA 692 (849)
Q Consensus 638 ------------ei~~~~~~~~~-------------~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~ 692 (849)
.+.++++++.. ....++||||+++|++.+.+.+ ..+++.++..++.||+.|
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~----~~~~~~~~~~i~~qi~~a 173 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT----KLSSLATAKSILHQLTAS 173 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT----TCCCHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh----cCCCHHHHHHHHHHHHHH
Confidence 22334444443 6789999999999977666643 348999999999999999
Q ss_pred HHHHH-hcCCCCeEecCCCCCCeeecCCC--------------------cEEEeeecCCcccCCCCCCeeeccCCccccc
Q 042123 693 LSYLH-HDCFPPIVHRDISSKNLLLDLEY--------------------EAHVADFGIAKSLKPDSSNWTEFAGTCGYIA 751 (849)
Q Consensus 693 l~~LH-~~~~~~ivH~dlk~~Nill~~~~--------------------~~kl~DfG~a~~~~~~~~~~~~~~g~~~y~a 751 (849)
|+||| +. +|+||||||+|||++.++ .+||+|||+|+..... ...||+.|+|
T Consensus 174 L~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-----~~~gt~~y~a 245 (336)
T 2vuw_A 174 LAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-----IVVFCDVSMD 245 (336)
T ss_dssp HHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-----EEECCCCTTC
T ss_pred HHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-----cEEEeecccC
Confidence 99999 88 999999999999999887 8999999999876532 3479999999
Q ss_pred cccccCCCCCccchHHHHHHH-HHHHHhCCCCCCccccccccccccccccccccCCCCCCCChhhHHHHHHHHHHHhhcc
Q 042123 752 PELAYTMKITEKCDVYSFGVL-MWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLPAPSRSAQEKLISIMEVAFSCF 830 (849)
Q Consensus 752 PE~~~~~~~~~~~Dv~SlGvi-l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 830 (849)
||++.+.. +.++||||+|++ .+++++|..||........ ..+..... ..................+.+++.+||
T Consensus 246 PE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~s~~~~dli~~~L 320 (336)
T 2vuw_A 246 EDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHY---LTDKMLKQ-MTFKTKCNTPAMKQIKRKIQEFHRTML 320 (336)
T ss_dssp SGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHH---HHHHHHHT-CCCSSCCCSHHHHHHHHHHHHHHHHGG
T ss_pred hhhhcCCC-ccceehhhhhCCCCcccccccCCCcchhhhhH---HHHhhhhh-hccCcccchhhhhhcCHHHHHHHHHHh
Confidence 99998766 889999998777 7788899999853211000 00011101 111112223334456677999999999
Q ss_pred CCCCCCCCCHHHHH-hh
Q 042123 831 NESPESRPTMKIIS-QQ 846 (849)
Q Consensus 831 ~~dP~~RPt~~eil-~~ 846 (849)
+.| |++|++ +|
T Consensus 321 ~~d-----sa~e~l~~H 332 (336)
T 2vuw_A 321 NFS-----SATDLLCQH 332 (336)
T ss_dssp GSS-----SHHHHHHHC
T ss_pred ccC-----CHHHHHhcC
Confidence 976 999999 65
No 298
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.97 E-value=4.2e-31 Score=312.79 Aligned_cols=222 Identities=23% Similarity=0.318 Sum_probs=171.7
Q ss_pred cCCCcCceecCCccceEEEEEec--CCcEEEEEEecccCCCCchhhHHHHHHHHH-----------HhhceeecCCe---
Q 042123 588 NDFDAKYCIGNGGHASVYRAELP--SGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-----------AFYGFCSHARH--- 651 (849)
Q Consensus 588 ~~f~~~~~lG~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-----------~~~~~~~~~~~--- 651 (849)
++|++.+.||+|+||.||+|... +++.||||++... ........+.+|+. .+++++.+.+.
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~---~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~ 156 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHS---GDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGD 156 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSS---CCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSC
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCcc---CCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCC
Confidence 68999999999999999999764 6899999987643 12233445666654 35667665544
Q ss_pred --eEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecC
Q 042123 652 --SFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGI 729 (849)
Q Consensus 652 --~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~ 729 (849)
.|+||||+++++|.+++.. .+++.++..++.||+.||+|||+. +|+||||||+||+++.+ .+||+|||+
T Consensus 157 ~~~~lv~E~~~g~~L~~~~~~-----~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~ 227 (681)
T 2pzi_A 157 PVGYIVMEYVGGQSLKRSKGQ-----KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGA 227 (681)
T ss_dssp EEEEEEEECCCCEECC----C-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTT
T ss_pred ceeEEEEEeCCCCcHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEeccc
Confidence 6999999999999987743 589999999999999999999999 99999999999999875 899999999
Q ss_pred CcccCCCCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCC
Q 042123 730 AKSLKPDSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHPRDFLSSISSSSLNTDVALDQMLDPRLP 809 (849)
Q Consensus 730 a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 (849)
++..... ....||+.|+|||++.+. ++.++|||||||++|+|++|..||..... + .++
T Consensus 228 a~~~~~~----~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~----------------~-~~~ 285 (681)
T 2pzi_A 228 VSRINSF----GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYV----------------D-GLP 285 (681)
T ss_dssp CEETTCC----SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEEC----------------S-SCC
T ss_pred chhcccC----CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCccccc----------------c-ccc
Confidence 9876543 345799999999998765 48899999999999999999988763110 0 011
Q ss_pred CCChhhHHHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 042123 810 APSRSAQEKLISIMEVAFSCFNESPESRPTMKIIS 844 (849)
Q Consensus 810 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil 844 (849)
. ..........+.+++.+||++||++||+..+.+
T Consensus 286 ~-~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l 319 (681)
T 2pzi_A 286 E-DDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEM 319 (681)
T ss_dssp T-TCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHH
T ss_pred c-cccccccCHHHHHHHhhhccCChhhCCCHHHHH
Confidence 1 111222335688999999999999999655443
No 299
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.97 E-value=1.1e-29 Score=267.95 Aligned_cols=254 Identities=22% Similarity=0.223 Sum_probs=219.5
Q ss_pred EEEecCCCceeeeeCCccCCCCCCCCEEeCcCCccccCCCccccCCCCCCEeeCCCCcCcccccccccccCCCCCccccC
Q 042123 8 INISLPNIGVNGTLHDFSFSSFPHLAYLDLTWNGFFGTIPPQISNLSNLRYLYLGSNQFSGNILAEVSSESSGGNLRYMS 87 (849)
Q Consensus 8 ~~~~~~~~~~~~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~ 87 (849)
+.+++.+.++... +..-.++|++|+|++|+++++.+..|.++++|++|+|++|++++ .....|+.+++|+
T Consensus 14 ~~~~c~~~~l~~i----p~~~~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~------~~~~~~~~l~~L~ 83 (285)
T 1ozn_A 14 VTTSCPQQGLQAV----PVGIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLAR------IDAAAFTGLALLE 83 (285)
T ss_dssp CEEECCSSCCSSC----CTTCCTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCE------ECTTTTTTCTTCC
T ss_pred eEEEcCcCCcccC----CcCCCCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccce------eCHhhcCCccCCC
Confidence 5677788776544 33346799999999999999999999999999999999999974 2345678899999
Q ss_pred eEeccCCc-ccccCCccCCCCCCCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEEcCCC
Q 042123 88 RLVINDNS-LSGFIPPHIGNLKFLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLNDN 166 (849)
Q Consensus 88 ~L~l~~n~-l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 166 (849)
+|++++|. +....|..|.++++|++|++++|+++++.|..|.++++|++|++++|.++...+..|.++++|++|+|++|
T Consensus 84 ~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 163 (285)
T 1ozn_A 84 QLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGN 163 (285)
T ss_dssp EEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred EEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCC
Confidence 99999997 88777899999999999999999999988999999999999999999999887788999999999999999
Q ss_pred cccccCCcCCCCCCCCCEEEccCCCCcCcCcccccCCCCCCEEeccCCcCccCCCcCccCccccchhhhccccccCCCCc
Q 042123 167 QLIGYIPRPFSNLTSVSTLRLSRNDLFGSIPDEIGKMRSLSVLDLNQNQFKGVLPPSISNLTNLKELALLYNHLSGSIPP 246 (849)
Q Consensus 167 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~ 246 (849)
+++++.+..|..+++|++|+|++|++++..|..|.++++|+.|++++|++++..+..+..+++|++|+|++|++.+..+.
T Consensus 164 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~ 243 (285)
T 1ozn_A 164 RISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRA 243 (285)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGG
T ss_pred cccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCc
Confidence 99999888999999999999999999988899999999999999999999987777899999999999999999865544
Q ss_pred chhhhhhhhhhccCcCCCCCCCccc
Q 042123 247 SLGNLILRQLLLSGNHFTGYLPYNI 271 (849)
Q Consensus 247 ~~~~~~L~~L~L~~n~i~~~~~~~~ 271 (849)
......++.+..+.+.+....|..+
T Consensus 244 ~~~~~~l~~~~~~~~~~~c~~p~~l 268 (285)
T 1ozn_A 244 RPLWAWLQKFRGSSSEVPCSLPQRL 268 (285)
T ss_dssp HHHHHHHHHCCSEECCCBEEESGGG
T ss_pred HHHHHHHHhcccccCccccCCchHh
Confidence 3222236666666666665555443
No 300
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=4e-30 Score=280.32 Aligned_cols=276 Identities=18% Similarity=0.148 Sum_probs=182.2
Q ss_pred CCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEEcCCCcccccCCcCCCCCCCCCEEEcc
Q 042123 109 FLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLNDNQLIGYIPRPFSNLTSVSTLRLS 188 (849)
Q Consensus 109 ~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 188 (849)
.....++++|+++. +|..+. ++|++|++++|.+++..+..|.++++|++|+|++|+++++.+.+|.++++|++|+|+
T Consensus 32 ~~~~c~~~~~~l~~-iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (353)
T 2z80_A 32 RNGICKGSSGSLNS-IPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLS 108 (353)
T ss_dssp TTSEEECCSTTCSS-CCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCeEeeCCCCCccc-cccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECC
Confidence 33445666666663 333332 356666666666665555566666666666666666666666666666666666666
Q ss_pred CCCCcCcCcccccCCCCCCEEeccCCcCccCCC-cCccCccccchhhhcccc-ccCCCCcchhhhhhhhhhccCcCCCCC
Q 042123 189 RNDLFGSIPDEIGKMRSLSVLDLNQNQFKGVLP-PSISNLTNLKELALLYNH-LSGSIPPSLGNLILRQLLLSGNHFTGY 266 (849)
Q Consensus 189 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~~~L~~L~L~~n~i~~~ 266 (849)
+|++++..+..|.++++|++|++++|+++.+.+ ..|..+++|++|++++|. +. ..
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~-----------------------~~ 165 (353)
T 2z80_A 109 YNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFT-----------------------KI 165 (353)
T ss_dssp SSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCC-----------------------EE
T ss_pred CCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCcccc-----------------------cc
Confidence 666664444446666666666666666664433 356666666666666663 32 12
Q ss_pred CCcccCCCCCcceeeecccccccccCCCCCCcccccEEEccCccccCchhhhhCCCCCCCEEeccCccccCcccccCC--
Q 042123 267 LPYNICRGGALEIFTVSENHFQGTIPTSLRNCTSLIRVRLNGNNLTGNISEALGIYPNLTFIDLSRNNFYGEISSNWG-- 344 (849)
Q Consensus 267 ~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~-- 344 (849)
.+..+..+++|+.|++++|++++..|..+..+++|++|++++|.++..+...+..+++|+.|+|++|++.+..+..+.
T Consensus 166 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 245 (353)
T 2z80_A 166 QRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTG 245 (353)
T ss_dssp CTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC-----
T ss_pred CHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccc
Confidence 233445556677777777777767777888888888888888888876666667788899999999988876554433
Q ss_pred -CCCCCcEEeccCCcccc----CCCCCccccccccccccccccccccCchhhcCCCCCcEEEccCcccccc
Q 042123 345 -KFPKLGTLNVSMNNITG----GLPREIGNSSQLQAFDLSLNHIVGEIPKELGKLNPLTKLILRGNQITGR 410 (849)
Q Consensus 345 -~l~~L~~L~Ls~N~i~~----~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~ 410 (849)
....++.++++++.+++ .+|..+..+++|+.|+|++|+++...+..|..+++|++|+|++|++.+.
T Consensus 246 ~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~ 316 (353)
T 2z80_A 246 ETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 316 (353)
T ss_dssp -CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred cccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCc
Confidence 34567778888877764 2566677788888888888888844444467888888888888888743
No 301
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=5.8e-30 Score=279.03 Aligned_cols=280 Identities=17% Similarity=0.153 Sum_probs=206.5
Q ss_pred ccCCCCCCEeeCCCCcCcccccccccccCCCCCccccCeEeccCCcccccCCccCCCCCCCCEEEccCCcccCCCCCCCc
Q 042123 50 ISNLSNLRYLYLGSNQFSGNILAEVSSESSGGNLRYMSRLVINDNSLSGFIPPHIGNLKFLSQLDLTNNKFSGPIPLSFD 129 (849)
Q Consensus 50 ~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~ 129 (849)
-..++.....++++|+++.. |..+ .++|++|++++|.++++.+..|.++++|++|+|++|+|+++.+.+|.
T Consensus 27 ~~~C~~~~~c~~~~~~l~~i-P~~~--------~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 97 (353)
T 2z80_A 27 SLSCDRNGICKGSSGSLNSI-PSGL--------TEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFS 97 (353)
T ss_dssp CCEECTTSEEECCSTTCSSC-CTTC--------CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTT
T ss_pred CCCCCCCeEeeCCCCCcccc-cccc--------cccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcC
Confidence 34556666788999988732 2111 35789999999999987777899999999999999999988888899
Q ss_pred CCCCCceeeccCcccccccccccCCCCCCCEEEcCCCcccccCC-cCCCCCCCCCEEEccCC-CCcCcCcccccCCCCCC
Q 042123 130 NLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLNDNQLIGYIP-RPFSNLTSVSTLRLSRN-DLFGSIPDEIGKMRSLS 207 (849)
Q Consensus 130 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N-~l~~~~~~~~~~l~~L~ 207 (849)
++++|++|+|++|++++..+..|.++++|++|+|++|++..+.+ ..|..+++|++|++++| .+....+..|.++++|+
T Consensus 98 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~ 177 (353)
T 2z80_A 98 SLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLE 177 (353)
T ss_dssp TCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEE
T ss_pred CCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCC
Confidence 99999999999999987666668889999999999999988766 67888999999999998 47766677888899999
Q ss_pred EEeccCCcCccCCCcCccCccccchhhhccccccCCCCcchhhhhhhhhhccCcCCCCCCCcccCCCCCcceeeeccccc
Q 042123 208 VLDLNQNQFKGVLPPSISNLTNLKELALLYNHLSGSIPPSLGNLILRQLLLSGNHFTGYLPYNICRGGALEIFTVSENHF 287 (849)
Q Consensus 208 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~N~l 287 (849)
+|++++|++++..|..|..+++|++|++++|.+. .+|..+.. .+++|+.|++++|.+
T Consensus 178 ~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~-~~~~~~~~----------------------~~~~L~~L~L~~n~l 234 (353)
T 2z80_A 178 ELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHI-LLLEIFVD----------------------VTSSVECLELRDTDL 234 (353)
T ss_dssp EEEEEETTCCEECTTTTTTCSEEEEEEEECSCST-THHHHHHH----------------------HTTTEEEEEEESCBC
T ss_pred EEECCCCCcCccCHHHHhccccCCeecCCCCccc-cchhhhhh----------------------hcccccEEECCCCcc
Confidence 9999999998888888999999999999988885 34433221 123444455555544
Q ss_pred ccccCCCCC---CcccccEEEccCccccC----chhhhhCCCCCCCEEeccCccccCcccccCCCCCCCcEEeccCCccc
Q 042123 288 QGTIPTSLR---NCTSLIRVRLNGNNLTG----NISEALGIYPNLTFIDLSRNNFYGEISSNWGKFPKLGTLNVSMNNIT 360 (849)
Q Consensus 288 ~~~~~~~~~---~l~~L~~L~L~~n~l~~----~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~ 360 (849)
++..+..+. ....++.++++++.+++ .+|..+..+++|+.|+|++|+++...+..|..+++|++|++++|.+.
T Consensus 235 ~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~ 314 (353)
T 2z80_A 235 DTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWD 314 (353)
T ss_dssp TTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred ccccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCcc
Confidence 443332221 23456666666666653 34566777777777777777777544444567777777777777776
Q ss_pred c
Q 042123 361 G 361 (849)
Q Consensus 361 ~ 361 (849)
+
T Consensus 315 ~ 315 (353)
T 2z80_A 315 C 315 (353)
T ss_dssp C
T ss_pred C
Confidence 3
No 302
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=2e-29 Score=269.15 Aligned_cols=247 Identities=23% Similarity=0.251 Sum_probs=136.5
Q ss_pred eEeccCCcccccCCccCCCCCCCCEEEccCCcccCCCCCCCcCCCCCceeeccCccccccc--ccccCCCCCCCEEEcCC
Q 042123 88 RLVINDNSLSGFIPPHIGNLKFLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSI--LSSLGKLKSLFDLQLND 165 (849)
Q Consensus 88 ~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~L~~ 165 (849)
.++++++.++ .+|..+. ++|++|+|++|+++++.+..|.++++|++|+|++|.++... +..+.++++|++|+|++
T Consensus 11 ~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~ 87 (306)
T 2z66_A 11 EIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSF 87 (306)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCS
T ss_pred EEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCC
Confidence 3444444444 2333332 45666666666666555555666666666666666665321 34445566666666666
Q ss_pred CcccccCCcCCCCCCCCCEEEccCCCCcCcCc-ccccCCCCCCEEeccCCcCccCCCcCccCccccchhhhccccccCCC
Q 042123 166 NQLIGYIPRPFSNLTSVSTLRLSRNDLFGSIP-DEIGKMRSLSVLDLNQNQFKGVLPPSISNLTNLKELALLYNHLSGSI 244 (849)
Q Consensus 166 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 244 (849)
|.+..+ |..|..+++|++|++++|++++..+ ..+..+++|++|++++|.+.+..+..|..+++|++|++++|.+.+.
T Consensus 88 n~i~~l-~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~- 165 (306)
T 2z66_A 88 NGVITM-SSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQEN- 165 (306)
T ss_dssp CSEEEE-EEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGG-
T ss_pred CccccC-hhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccc-
Confidence 666553 3345566666666666666654333 3555666666666666666655555555555555555555555420
Q ss_pred CcchhhhhhhhhhccCcCCCCCCCcccCCCCCcceeeecccccccccCCCCCCcccccEEEccCccccCchhhhhCCCCC
Q 042123 245 PPSLGNLILRQLLLSGNHFTGYLPYNICRGGALEIFTVSENHFQGTIPTSLRNCTSLIRVRLNGNNLTGNISEALGIYPN 324 (849)
Q Consensus 245 p~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 324 (849)
..|..+..+++|+.|++++|++++..|..|..+++|+.|++++|++++..+..+..+++
T Consensus 166 ---------------------~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 224 (306)
T 2z66_A 166 ---------------------FLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNS 224 (306)
T ss_dssp ---------------------EECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTT
T ss_pred ---------------------cchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCccc
Confidence 11223333444555555555555444555555566666666666665555555555566
Q ss_pred CCEEeccCccccCcccccCCCCC-CCcEEeccCCccc
Q 042123 325 LTFIDLSRNNFYGEISSNWGKFP-KLGTLNVSMNNIT 360 (849)
Q Consensus 325 L~~L~Ls~N~l~~~~~~~~~~l~-~L~~L~Ls~N~i~ 360 (849)
|+.|+|++|++.+..+..+..++ +|++|+|++|.++
T Consensus 225 L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~ 261 (306)
T 2z66_A 225 LQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFA 261 (306)
T ss_dssp CCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEE
T ss_pred CCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCee
Confidence 66666666666555555555553 5555555555555
No 303
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=1.3e-29 Score=270.61 Aligned_cols=247 Identities=21% Similarity=0.243 Sum_probs=144.6
Q ss_pred CEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEEcCCCcccccC--CcCCCCCCCCCEEEcc
Q 042123 111 SQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLNDNQLIGYI--PRPFSNLTSVSTLRLS 188 (849)
Q Consensus 111 ~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~Ls 188 (849)
+.+++++++++. +|..+. ++|++|+|++|.++...+..|.++++|++|+|++|++..+. +..+..+++|++|+|+
T Consensus 10 ~~l~c~~~~l~~-ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls 86 (306)
T 2z66_A 10 TEIRCNSKGLTS-VPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLS 86 (306)
T ss_dssp TEEECCSSCCSS-CCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECC
T ss_pred CEEEcCCCCccc-CCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECC
Confidence 567788888874 444332 57777778777777555556777777777777777776432 4455567777777777
Q ss_pred CCCCcCcCcccccCCCCCCEEeccCCcCccCCC-cCccCccccchhhhccccccCCCCcchhhhhhhhhhccCcCCCCCC
Q 042123 189 RNDLFGSIPDEIGKMRSLSVLDLNQNQFKGVLP-PSISNLTNLKELALLYNHLSGSIPPSLGNLILRQLLLSGNHFTGYL 267 (849)
Q Consensus 189 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~L~~n~i~~~~ 267 (849)
+|++. .+|..+.++++|++|++++|++++..+ ..+..+++|++|++++|.+.+ ..
T Consensus 87 ~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~-----------------------~~ 142 (306)
T 2z66_A 87 FNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRV-----------------------AF 142 (306)
T ss_dssp SCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEE-----------------------CS
T ss_pred CCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCc-----------------------cc
Confidence 77776 455567777777777777777765443 455666666655555555442 22
Q ss_pred CcccCCCCCcceeeeccccccc-ccCCCCCCcccccEEEccCccccCchhhhhCCCCCCCEEeccCccccCcccccCCCC
Q 042123 268 PYNICRGGALEIFTVSENHFQG-TIPTSLRNCTSLIRVRLNGNNLTGNISEALGIYPNLTFIDLSRNNFYGEISSNWGKF 346 (849)
Q Consensus 268 ~~~~~~~~~L~~L~l~~N~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 346 (849)
+..+..+++|+.|++++|.+++ ..|..+..+++|+.|++++|++++..+..+..+++|+.|+|++|++.+..+..+..+
T Consensus 143 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 222 (306)
T 2z66_A 143 NGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCL 222 (306)
T ss_dssp TTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTC
T ss_pred hhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCc
Confidence 2333444555555555555554 345555555555555555555555545555555555555555555554444444455
Q ss_pred CCCcEEeccCCccccCCCCCcccc-cccccccccccccc
Q 042123 347 PKLGTLNVSMNNITGGLPREIGNS-SQLQAFDLSLNHIV 384 (849)
Q Consensus 347 ~~L~~L~Ls~N~i~~~~p~~~~~l-~~L~~L~L~~N~i~ 384 (849)
++|++|++++|.+++..|..+..+ ++|+.|+|++|.++
T Consensus 223 ~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~ 261 (306)
T 2z66_A 223 NSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFA 261 (306)
T ss_dssp TTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEE
T ss_pred ccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCee
Confidence 555555555555554444444444 24445555554444
No 304
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=5.2e-29 Score=262.91 Aligned_cols=207 Identities=26% Similarity=0.291 Sum_probs=120.3
Q ss_pred CCCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEEcCCCc-ccccCCcCCCCCCCCCEEE
Q 042123 108 KFLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLNDNQ-LIGYIPRPFSNLTSVSTLR 186 (849)
Q Consensus 108 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~ 186 (849)
++|++|+|++|+|+++.+..|..+++|++|+|++|.+++..+..|.++++|++|+|++|. +..+.+..|..+++|++|+
T Consensus 32 ~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~ 111 (285)
T 1ozn_A 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (285)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEE
Confidence 455555555555555555555555555555555555555545555555555555555554 5555555555555566666
Q ss_pred ccCCCCcCcCcccccCCCCCCEEeccCCcCccCCCcCccCccccchhhhccccccCCCCcchhhhhhhhhhccCcCCCCC
Q 042123 187 LSRNDLFGSIPDEIGKMRSLSVLDLNQNQFKGVLPPSISNLTNLKELALLYNHLSGSIPPSLGNLILRQLLLSGNHFTGY 266 (849)
Q Consensus 187 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~L~~n~i~~~ 266 (849)
|++|++++..|..|.++++|++|++++|+++...+..|..+++|++|+|++|++++ .
T Consensus 112 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-----------------------~ 168 (285)
T 1ozn_A 112 LDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISS-----------------------V 168 (285)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCE-----------------------E
T ss_pred CCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccc-----------------------c
Confidence 66655555545555555566666666665554444445555555555555554431 1
Q ss_pred CCcccCCCCCcceeeecccccccccCCCCCCcccccEEEccCccccCchhhhhCCCCCCCEEeccCccccC
Q 042123 267 LPYNICRGGALEIFTVSENHFQGTIPTSLRNCTSLIRVRLNGNNLTGNISEALGIYPNLTFIDLSRNNFYG 337 (849)
Q Consensus 267 ~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 337 (849)
.+..+..+++|+.|++++|++++..|..|..+++|+.|++++|++++.++..+..+++|+.|+|++|++.+
T Consensus 169 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c 239 (285)
T 1ozn_A 169 PERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVC 239 (285)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEEC
T ss_pred CHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccC
Confidence 11223334455555555555555556666677777777777777777666667777777777777777664
No 305
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=1e-28 Score=277.55 Aligned_cols=245 Identities=22% Similarity=0.251 Sum_probs=173.8
Q ss_pred eEeccCCcccccCCccCCCCCCCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEEcCCCc
Q 042123 88 RLVINDNSLSGFIPPHIGNLKFLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLNDNQ 167 (849)
Q Consensus 88 ~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 167 (849)
.++++++.++ .+|..+. ++++.|+|++|+|+++.+..|.++++|++|+|++|.|+.+.+..|.++++|++|+|++|+
T Consensus 47 ~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~ 123 (440)
T 3zyj_A 47 KVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNR 123 (440)
T ss_dssp EEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSC
T ss_pred EEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCc
Confidence 4455555554 3444443 466677777777766666667777777777777777766666667777777777777777
Q ss_pred ccccCCcCCCCCCCCCEEEccCCCCcCcCcccccCCCCCCEEeccC-CcCccCCCcCccCccccchhhhccccccCCCCc
Q 042123 168 LIGYIPRPFSNLTSVSTLRLSRNDLFGSIPDEIGKMRSLSVLDLNQ-NQFKGVLPPSISNLTNLKELALLYNHLSGSIPP 246 (849)
Q Consensus 168 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~ 246 (849)
++.+.+..|..+++|++|+|++|++....+..|.++++|++|+|++ |.+..+.+..|.++++|++|+|++|.++ .+|
T Consensus 124 l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~- 201 (440)
T 3zyj_A 124 LTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP- 201 (440)
T ss_dssp CSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC-
T ss_pred CCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-ccc-
Confidence 7766666677777777777777777655555667777777777776 4444444456777777777777777665 222
Q ss_pred chhhhhhhhhhccCcCCCCCCCcccCCCCCcceeeecccccccccCCCCCCcccccEEEccCccccCchhhhhCCCCCCC
Q 042123 247 SLGNLILRQLLLSGNHFTGYLPYNICRGGALEIFTVSENHFQGTIPTSLRNCTSLIRVRLNGNNLTGNISEALGIYPNLT 326 (849)
Q Consensus 247 ~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 326 (849)
.+..+++|+.|++++|++++..|..|.++++|+.|+|++|++++..+..|..+++|+
T Consensus 202 -----------------------~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 258 (440)
T 3zyj_A 202 -----------------------NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLV 258 (440)
T ss_dssp -----------------------CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCC
T ss_pred -----------------------ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCC
Confidence 134456777777777777777778888888888888888888888888888888888
Q ss_pred EEeccCccccCcccccCCCCCCCcEEeccCCccc
Q 042123 327 FIDLSRNNFYGEISSNWGKFPKLGTLNVSMNNIT 360 (849)
Q Consensus 327 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~ 360 (849)
.|+|++|++++..+..|..+++|+.|+|++|.+.
T Consensus 259 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 259 EINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp EEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEE
T ss_pred EEECCCCCCCccChhHhccccCCCEEEcCCCCcc
Confidence 8888888888777778888888888888888876
No 306
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=1.2e-28 Score=277.99 Aligned_cols=245 Identities=24% Similarity=0.244 Sum_probs=163.1
Q ss_pred eEeccCCcccccCCccCCCCCCCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEEcCCCc
Q 042123 88 RLVINDNSLSGFIPPHIGNLKFLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLNDNQ 167 (849)
Q Consensus 88 ~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 167 (849)
.++++++.++ .+|..+. ++|++|+|++|+|+++.+..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+
T Consensus 58 ~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~ 134 (452)
T 3zyi_A 58 KVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNW 134 (452)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCc
Confidence 4444444444 2343332 456666666666666556666666666666666666665555666666666666666666
Q ss_pred ccccCCcCCCCCCCCCEEEccCCCCcCcCcccccCCCCCCEEeccC-CcCccCCCcCccCccccchhhhccccccCCCCc
Q 042123 168 LIGYIPRPFSNLTSVSTLRLSRNDLFGSIPDEIGKMRSLSVLDLNQ-NQFKGVLPPSISNLTNLKELALLYNHLSGSIPP 246 (849)
Q Consensus 168 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~ 246 (849)
++.+.+..|..+++|++|+|++|++....+..|.++++|++|++++ |.+..+.+..|.++++|++|+|++|.+++ +|
T Consensus 135 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~- 212 (452)
T 3zyi_A 135 LTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-MP- 212 (452)
T ss_dssp CSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-CC-
T ss_pred CCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc-cc-
Confidence 6666666666666666666666666655555566666666666666 44444444456666666666666666552 22
Q ss_pred chhhhhhhhhhccCcCCCCCCCcccCCCCCcceeeecccccccccCCCCCCcccccEEEccCccccCchhhhhCCCCCCC
Q 042123 247 SLGNLILRQLLLSGNHFTGYLPYNICRGGALEIFTVSENHFQGTIPTSLRNCTSLIRVRLNGNNLTGNISEALGIYPNLT 326 (849)
Q Consensus 247 ~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 326 (849)
.+..+++|+.|++++|++++..|..|.++++|+.|++++|++++..+..|..+++|+
T Consensus 213 -----------------------~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 269 (452)
T 3zyi_A 213 -----------------------NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLV 269 (452)
T ss_dssp -----------------------CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred -----------------------cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCC
Confidence 133455677777777777777777788888888888888888888788888888888
Q ss_pred EEeccCccccCcccccCCCCCCCcEEeccCCccc
Q 042123 327 FIDLSRNNFYGEISSNWGKFPKLGTLNVSMNNIT 360 (849)
Q Consensus 327 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~ 360 (849)
.|+|++|++++..+..|..+++|+.|+|++|.+.
T Consensus 270 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 270 ELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWN 303 (452)
T ss_dssp EEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEE
T ss_pred EEECCCCcCCccChHHhccccCCCEEEccCCCcC
Confidence 8888888888777777888888888888888876
No 307
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=3.1e-28 Score=273.62 Aligned_cols=249 Identities=19% Similarity=0.146 Sum_probs=186.7
Q ss_pred CCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEEcCCCcccccCCcCCCCCCCCCEEEcc
Q 042123 109 FLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLNDNQLIGYIPRPFSNLTSVSTLRLS 188 (849)
Q Consensus 109 ~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 188 (849)
....++.++++++. +|..+. ++++.|+|++|+|+...+..|.++++|++|+|++|+|..+.+.+|.++++|++|+|+
T Consensus 44 ~~~~v~c~~~~l~~-iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~ 120 (440)
T 3zyj_A 44 QFSKVICVRKNLRE-VPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELF 120 (440)
T ss_dssp TSCEEECCSCCCSS-CCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECC
T ss_pred CCCEEEeCCCCcCc-CCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECC
Confidence 35678888888884 454443 577888888888887777788888888888888888888777788888888888888
Q ss_pred CCCCcCcCcccccCCCCCCEEeccCCcCccCCCcCccCccccchhhhccccccCCCCcchhhhhhhhhhccCcCCCCCCC
Q 042123 189 RNDLFGSIPDEIGKMRSLSVLDLNQNQFKGVLPPSISNLTNLKELALLYNHLSGSIPPSLGNLILRQLLLSGNHFTGYLP 268 (849)
Q Consensus 189 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~L~~n~i~~~~~ 268 (849)
+|+++...+..|.++++|++|+|++|+++.+.+..|..+++|++|+|++|+..
T Consensus 121 ~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l--------------------------- 173 (440)
T 3zyj_A 121 DNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRL--------------------------- 173 (440)
T ss_dssp SSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTC---------------------------
T ss_pred CCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCc---------------------------
Confidence 88887666667778888888888888887666667777777777776664321
Q ss_pred cccCCCCCcceeeecccccccccCCCCCCcccccEEEccCccccCchhhhhCCCCCCCEEeccCccccCcccccCCCCCC
Q 042123 269 YNICRGGALEIFTVSENHFQGTIPTSLRNCTSLIRVRLNGNNLTGNISEALGIYPNLTFIDLSRNNFYGEISSNWGKFPK 348 (849)
Q Consensus 269 ~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 348 (849)
....+..|.++++|+.|++++|+++..+ .+..+++|+.|+|++|++.+..+..|..+++
T Consensus 174 -------------------~~i~~~~~~~l~~L~~L~L~~n~l~~~~--~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 232 (440)
T 3zyj_A 174 -------------------SYISEGAFEGLSNLRYLNLAMCNLREIP--NLTPLIKLDELDLSGNHLSAIRPGSFQGLMH 232 (440)
T ss_dssp -------------------CEECTTTTTTCSSCCEEECTTSCCSSCC--CCTTCSSCCEEECTTSCCCEECTTTTTTCTT
T ss_pred -------------------ceeCcchhhcccccCeecCCCCcCcccc--ccCCCcccCEEECCCCccCccChhhhccCcc
Confidence 1122334555666666666666666432 3666777888888888887777777888888
Q ss_pred CcEEeccCCccccCCCCCccccccccccccccccccccCchhhcCCCCCcEEEccCcccc
Q 042123 349 LGTLNVSMNNITGGLPREIGNSSQLQAFDLSLNHIVGEIPKELGKLNPLTKLILRGNQIT 408 (849)
Q Consensus 349 L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~ 408 (849)
|+.|+|++|.+++..+..|.++++|+.|+|++|++++..+..|..+++|+.|+|++|++.
T Consensus 233 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 233 LQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp CCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEE
T ss_pred CCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCcc
Confidence 888888888888777778888888888888888888777778888889999999999886
No 308
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=3.3e-28 Score=274.42 Aligned_cols=228 Identities=21% Similarity=0.163 Sum_probs=128.9
Q ss_pred CCCCEEeCcCCccccCCCccccCCCCCCEeeCCCCcCcccccccccccCCCCCccccCeEeccCCcccccCCccCCCCCC
Q 042123 30 PHLAYLDLTWNGFFGTIPPQISNLSNLRYLYLGSNQFSGNILAEVSSESSGGNLRYMSRLVINDNSLSGFIPPHIGNLKF 109 (849)
Q Consensus 30 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 109 (849)
+++++|+|++|+|+++.+..|.++++|++|+|++|+|++ .....|.++++|+.|+|++|.|+.+.+..|.++++
T Consensus 75 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~------~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 148 (452)
T 3zyi_A 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQ------IEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSK 148 (452)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCE------ECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTT
T ss_pred CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCC------cChhhccCcccCCEEECCCCcCCccChhhhcccCC
Confidence 455556666665555555555555556666666555542 12234455555555555555555544445555555
Q ss_pred CCEEEccCCcccCCCCCCCcCCCCCceeeccC-cccccccccccCCCCCCCEEEcCCCcccccCCcCCCCCCCCCEEEcc
Q 042123 110 LSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYG-NLLSGSILSSLGKLKSLFDLQLNDNQLIGYIPRPFSNLTSVSTLRLS 188 (849)
Q Consensus 110 L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 188 (849)
|++|+|++|+|+++.+..|.++++|++|++++ |.+....+..|.++++|++|+|++|++++++ .+..+++|++|+|+
T Consensus 149 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~--~~~~l~~L~~L~Ls 226 (452)
T 3zyi_A 149 LRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDMP--NLTPLVGLEELEMS 226 (452)
T ss_dssp CCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSCC--CCTTCTTCCEEECT
T ss_pred CCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccccc--cccccccccEEECc
Confidence 55555555555555555555555555555555 3344333344555555555555555555431 35555555555555
Q ss_pred CCCCcCcCcccccCCCCCCEEeccCCcCccCCCcCccCccccchhhhccccccCCCCcchhhhhhhhhhccCcCCCCCCC
Q 042123 189 RNDLFGSIPDEIGKMRSLSVLDLNQNQFKGVLPPSISNLTNLKELALLYNHLSGSIPPSLGNLILRQLLLSGNHFTGYLP 268 (849)
Q Consensus 189 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~L~~n~i~~~~~ 268 (849)
+|++++..|..|.++++|+.|+|++|+++++.+..|.++++|++|+|++|+ +++..+
T Consensus 227 ~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~-----------------------l~~~~~ 283 (452)
T 3zyi_A 227 GNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNN-----------------------LSSLPH 283 (452)
T ss_dssp TSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC-----------------------CSCCCT
T ss_pred CCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCc-----------------------CCccCh
Confidence 555555555555555555555555555555555555555555555555554 444555
Q ss_pred cccCCCCCcceeeecccccc
Q 042123 269 YNICRGGALEIFTVSENHFQ 288 (849)
Q Consensus 269 ~~~~~~~~L~~L~l~~N~l~ 288 (849)
..|..+++|+.|++++|.+.
T Consensus 284 ~~~~~l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 284 DLFTPLRYLVELHLHHNPWN 303 (452)
T ss_dssp TSSTTCTTCCEEECCSSCEE
T ss_pred HHhccccCCCEEEccCCCcC
Confidence 66777788999999999876
No 309
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=2.1e-27 Score=274.30 Aligned_cols=248 Identities=24% Similarity=0.304 Sum_probs=146.6
Q ss_pred CCCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEEcCCCcccccCCcCCCCCCCCCEEEc
Q 042123 108 KFLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLNDNQLIGYIPRPFSNLTSVSTLRL 187 (849)
Q Consensus 108 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 187 (849)
++|++|+|++|+|+++ |. .+++|++|+|++|+|+. +|. .+++|++|+|++|+++++++ .+++|++|++
T Consensus 61 ~~L~~L~L~~N~l~~l-p~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~l~~----~l~~L~~L~L 128 (622)
T 3g06_A 61 AHITTLVIPDNNLTSL-PA---LPPELRTLEVSGNQLTS-LPV---LPPGLLELSIFSNPLTHLPA----LPSGLCKLWI 128 (622)
T ss_dssp TTCSEEEECSCCCSCC-CC---CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEECSCCCCCCCC----CCTTCCEEEC
T ss_pred CCCcEEEecCCCCCCC-CC---cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEECcCCcCCCCCC----CCCCcCEEEC
Confidence 4455555555555432 22 23445555555555442 222 34455555555555544322 3445555555
Q ss_pred cCCCCcCcCcccccCCCCCCEEeccCCcCccCCCcCccCccccchhhhccccccCCCCcchhhhhhhhhhccCcCCCCCC
Q 042123 188 SRNDLFGSIPDEIGKMRSLSVLDLNQNQFKGVLPPSISNLTNLKELALLYNHLSGSIPPSLGNLILRQLLLSGNHFTGYL 267 (849)
Q Consensus 188 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~L~~n~i~~~~ 267 (849)
++|+++. +|.. +++|++|+|++|+++++ |. .+++|+.|++++|.++ .+|
T Consensus 129 ~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~l-~~---~~~~L~~L~L~~N~l~-~l~---------------------- 177 (622)
T 3g06_A 129 FGNQLTS-LPVL---PPGLQELSVSDNQLASL-PA---LPSELCKLWAYNNQLT-SLP---------------------- 177 (622)
T ss_dssp CSSCCSC-CCCC---CTTCCEEECCSSCCSCC-CC---CCTTCCEEECCSSCCS-CCC----------------------
T ss_pred CCCCCCc-CCCC---CCCCCEEECcCCcCCCc-CC---ccCCCCEEECCCCCCC-CCc----------------------
Confidence 5555542 3322 24555555555555432 22 1233444444444443 121
Q ss_pred CcccCCCCCcceeeecccccccccCCCCCCcccccEEEccCccccCchhhhhCCCCCCCEEeccCccccCcccccCCCCC
Q 042123 268 PYNICRGGALEIFTVSENHFQGTIPTSLRNCTSLIRVRLNGNNLTGNISEALGIYPNLTFIDLSRNNFYGEISSNWGKFP 347 (849)
Q Consensus 268 ~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 347 (849)
..+++|+.|++++|.+++ +|.. +++|+.|++++|.++..+. .+++|+.|+|++|++++ +| ..++
T Consensus 178 ----~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~~l~~----~~~~L~~L~Ls~N~L~~-lp---~~l~ 241 (622)
T 3g06_A 178 ----MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTSLPA----LPSGLKELIVSGNRLTS-LP---VLPS 241 (622)
T ss_dssp ----CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSSCCC----CCTTCCEEECCSSCCSC-CC---CCCT
T ss_pred ----ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCcccccCC----CCCCCCEEEccCCccCc-CC---CCCC
Confidence 112445555555555553 3322 3567777777777774432 24778888888888875 34 4557
Q ss_pred CCcEEeccCCccccCCCCCccccccccccccccccccccCchhhcCCCCCcEEEccCccccccCcccccccc
Q 042123 348 KLGTLNVSMNNITGGLPREIGNSSQLQAFDLSLNHIVGEIPKELGKLNPLTKLILRGNQITGRLPKEIGSLT 419 (849)
Q Consensus 348 ~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 419 (849)
+|+.|+|++|.|+ .+|. .+++|+.|+|++|+|+ .+|..|..+++|+.|+|++|++++..|..+..++
T Consensus 242 ~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 242 ELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp TCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred cCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhcc
Confidence 8899999999988 4555 5678999999999998 6788899999999999999999988777766654
No 310
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.95 E-value=6.7e-28 Score=259.06 Aligned_cols=234 Identities=19% Similarity=0.257 Sum_probs=146.9
Q ss_pred CCCCEEEcCCCcccccCCcCCCCCCCCCEEEccCCCCcCcCcccccCCCCCCEEeccCCcCccCCCcCccCccccchhhh
Q 042123 156 KSLFDLQLNDNQLIGYIPRPFSNLTSVSTLRLSRNDLFGSIPDEIGKMRSLSVLDLNQNQFKGVLPPSISNLTNLKELAL 235 (849)
Q Consensus 156 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 235 (849)
.+++.|+|++|.+..+ |..+..+++|++|+|++|.++ .+|..+.++++|++|+|++|+++ .+|..+..+++|++|+|
T Consensus 81 ~~l~~L~L~~n~l~~l-p~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L 157 (328)
T 4fcg_A 81 PGRVALELRSVPLPQF-PDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSI 157 (328)
T ss_dssp TTCCEEEEESSCCSSC-CSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEE
T ss_pred cceeEEEccCCCchhc-ChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEEC
Confidence 5566666666666643 444555667777777777766 66666667777777777777776 45666777777777777
Q ss_pred ccccccCCCCcchhhhhhhhhhccCcCCCCCCCcccCCCCCcceeeecccccccccCCCCCCcccccEEEccCccccCch
Q 042123 236 LYNHLSGSIPPSLGNLILRQLLLSGNHFTGYLPYNICRGGALEIFTVSENHFQGTIPTSLRNCTSLIRVRLNGNNLTGNI 315 (849)
Q Consensus 236 ~~N~l~~~~p~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 315 (849)
++|++.+.+|..+... ..+..+..+++|+.|++++|+++ .+|..+.++++|+.|++++|++++.+
T Consensus 158 ~~n~~~~~~p~~~~~~--------------~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~l~ 222 (328)
T 4fcg_A 158 RACPELTELPEPLAST--------------DASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSALG 222 (328)
T ss_dssp EEETTCCCCCSCSEEE--------------C-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCCCC
T ss_pred CCCCCccccChhHhhc--------------cchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCcCc
Confidence 7766665665544321 11223444556666666666666 55556666666666666666666433
Q ss_pred hhhhCCCCCCCEEeccCccccCcccccCCCCCCCcEEeccCCccccCCCCCccccccccccccccccccccCchhhcCCC
Q 042123 316 SEALGIYPNLTFIDLSRNNFYGEISSNWGKFPKLGTLNVSMNNITGGLPREIGNSSQLQAFDLSLNHIVGEIPKELGKLN 395 (849)
Q Consensus 316 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~ 395 (849)
..+..+++|++|+|++|.+.+.+|..|..+++|++|+|++|.+.+.+|..+.++++|+.|+|++|.+.+.+|..++.++
T Consensus 223 -~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~ 301 (328)
T 4fcg_A 223 -PAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLP 301 (328)
T ss_dssp -GGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSC
T ss_pred -hhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhcc
Confidence 3466666666666666666666666666666666666666666666666666666666666666666666666666666
Q ss_pred CCcEEEccCcccc
Q 042123 396 PLTKLILRGNQIT 408 (849)
Q Consensus 396 ~L~~L~L~~N~l~ 408 (849)
+|+.+++..|.+.
T Consensus 302 ~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 302 ANCIILVPPHLQA 314 (328)
T ss_dssp TTCEEECCGGGSC
T ss_pred CceEEeCCHHHHH
Confidence 6666666655443
No 311
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=4.7e-29 Score=266.62 Aligned_cols=248 Identities=19% Similarity=0.179 Sum_probs=182.9
Q ss_pred ccCccccchhhhccccccCCCCcchhhhhhhhhhccCcCCC-CCCCcccC-------CCCCcceeeecccccccccCCCC
Q 042123 224 ISNLTNLKELALLYNHLSGSIPPSLGNLILRQLLLSGNHFT-GYLPYNIC-------RGGALEIFTVSENHFQGTIPTSL 295 (849)
Q Consensus 224 ~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~L~~n~i~-~~~~~~~~-------~~~~L~~L~l~~N~l~~~~~~~~ 295 (849)
++..++|++|++++|.+ .+|..+... ++.|+|++|+++ ..+|..+. .+++|++|++++|++++..|..+
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~~-L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 115 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTDI-IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPL 115 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHHH-HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCS
T ss_pred EccCCCceeEeeccccc--ccHHHHHHH-HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHH
Confidence 44455566666666666 455544433 666666666663 23343333 56778888888888887777765
Q ss_pred --CCcccccEEEccCccccCchhhhhCCC-----CCCCEEeccCccccCcccccCCCCCCCcEEeccCCccccC--CCCC
Q 042123 296 --RNCTSLIRVRLNGNNLTGNISEALGIY-----PNLTFIDLSRNNFYGEISSNWGKFPKLGTLNVSMNNITGG--LPRE 366 (849)
Q Consensus 296 --~~l~~L~~L~L~~n~l~~~~~~~~~~l-----~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~--~p~~ 366 (849)
..+++|++|+|++|++++. |..+..+ ++|++|+|++|++.+..+..|..+++|++|++++|++.+. .|..
T Consensus 116 ~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 194 (312)
T 1wwl_A 116 LEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISA 194 (312)
T ss_dssp SSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHH
T ss_pred HHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHH
Confidence 7788888888888888876 5666655 7888888888888877778888888888888888887644 2333
Q ss_pred c--cccccccccccccccccc---cCchhhcCCCCCcEEEccCccccccCc-cccccccccccccccc--CCCCChhhhc
Q 042123 367 I--GNSSQLQAFDLSLNHIVG---EIPKELGKLNPLTKLILRGNQITGRLP-KEIGSLTKLEYLDFSA--IGELPSQICN 438 (849)
Q Consensus 367 ~--~~l~~L~~L~L~~N~i~~---~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~l~~--l~~lp~~~~~ 438 (849)
+ ..+++|++|+|++|++++ .....+..+++|++|+|++|++++..| ..+..+++|++|+++. +..+|..+.
T Consensus 195 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~ip~~~~- 273 (312)
T 1wwl_A 195 LCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLKQVPKGLP- 273 (312)
T ss_dssp SCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCSSCCSSCC-
T ss_pred HHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccChhhhhcc-
Confidence 3 777888888888888873 222445677888888888888887665 4566678888888875 677888776
Q ss_pred ccccceeccCCcccccCCCccccccCCCcEEeccCCccccC
Q 042123 439 MKSLEKLNLSHNNLSGSIPSCFEGMHGLSFIDMSYNELQCP 479 (849)
Q Consensus 439 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~ 479 (849)
++|+.|+|++|+|++. |. +..+++|++|++++|+|++.
T Consensus 274 -~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~~ 311 (312)
T 1wwl_A 274 -AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLDS 311 (312)
T ss_dssp -SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTCC
T ss_pred -CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCCC
Confidence 8999999999999977 66 99999999999999999863
No 312
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=6.9e-27 Score=270.07 Aligned_cols=269 Identities=22% Similarity=0.254 Sum_probs=155.6
Q ss_pred CCCCEEeCcCCccccCCCccccCCCCCCEeeCCCCcCcccccccccccCCCCCccccCeEeccCCcccccCCccCCCCCC
Q 042123 30 PHLAYLDLTWNGFFGTIPPQISNLSNLRYLYLGSNQFSGNILAEVSSESSGGNLRYMSRLVINDNSLSGFIPPHIGNLKF 109 (849)
Q Consensus 30 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 109 (849)
.+++.|++++|+++ .+|..+. ++|++|+|++|+|+. +.. .+++|+.|+|++|.|++ +|. .+++
T Consensus 40 ~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~~-----lp~-----~l~~L~~L~Ls~N~l~~-lp~---~l~~ 102 (622)
T 3g06_A 40 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTS-----LPA-----LPPELRTLEVSGNQLTS-LPV---LPPG 102 (622)
T ss_dssp HCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCSC-----CCC-----CCTTCCEEEECSCCCSC-CCC---CCTT
T ss_pred CCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCCC-----CCC-----cCCCCCEEEcCCCcCCc-CCC---CCCC
Confidence 34777888888876 4444443 677788888777762 111 24566666666666653 333 4456
Q ss_pred CCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEEcCCCcccccCCcCCCCCCCCCEEEccC
Q 042123 110 LSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLNDNQLIGYIPRPFSNLTSVSTLRLSR 189 (849)
Q Consensus 110 L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 189 (849)
|++|+|++|+|+++.+ .+++|+.|++++|+|+. +|.. +++|++|+|++|++++++. .+.+|+.|++++
T Consensus 103 L~~L~Ls~N~l~~l~~----~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~l~~----~~~~L~~L~L~~ 170 (622)
T 3g06_A 103 LLELSIFSNPLTHLPA----LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLASLPA----LPSELCKLWAYN 170 (622)
T ss_dssp CCEEEECSCCCCCCCC----CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSCCCC----CCTTCCEEECCS
T ss_pred CCEEECcCCcCCCCCC----CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCCcCC----ccCCCCEEECCC
Confidence 6666666666664322 34556666666666553 2221 2555555555555554321 234455555555
Q ss_pred CCCcCcCcccccCCCCCCEEeccCCcCccCCCcCccCccccchhhhccccccCCCCcchhhhhhhhhhccCcCCCCCCCc
Q 042123 190 NDLFGSIPDEIGKMRSLSVLDLNQNQFKGVLPPSISNLTNLKELALLYNHLSGSIPPSLGNLILRQLLLSGNHFTGYLPY 269 (849)
Q Consensus 190 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~L~~n~i~~~~~~ 269 (849)
|+++. +| ..+++|+.|++++|.+++ +|.. +++|
T Consensus 171 N~l~~-l~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L--------------------------------------- 203 (622)
T 3g06_A 171 NQLTS-LP---MLPSGLQELSVSDNQLAS-LPTL---PSEL--------------------------------------- 203 (622)
T ss_dssp SCCSC-CC---CCCTTCCEEECCSSCCSC-CCCC---CTTC---------------------------------------
T ss_pred CCCCC-Cc---ccCCCCcEEECCCCCCCC-CCCc---cchh---------------------------------------
Confidence 55552 33 234455555555555543 2211 1233
Q ss_pred ccCCCCCcceeeecccccccccCCCCCCcccccEEEccCccccCchhhhhCCCCCCCEEeccCccccCcccccCCCCCCC
Q 042123 270 NICRGGALEIFTVSENHFQGTIPTSLRNCTSLIRVRLNGNNLTGNISEALGIYPNLTFIDLSRNNFYGEISSNWGKFPKL 349 (849)
Q Consensus 270 ~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 349 (849)
+.|++++|.++ .+|.. +++|+.|++++|+|++++ ..+++|+.|+|++|+++. +|. .+++|
T Consensus 204 --------~~L~L~~N~l~-~l~~~---~~~L~~L~Ls~N~L~~lp----~~l~~L~~L~Ls~N~L~~-lp~---~~~~L 263 (622)
T 3g06_A 204 --------YKLWAYNNRLT-SLPAL---PSGLKELIVSGNRLTSLP----VLPSELKELMVSGNRLTS-LPM---LPSGL 263 (622)
T ss_dssp --------CEEECCSSCCS-SCCCC---CTTCCEEECCSSCCSCCC----CCCTTCCEEECCSSCCSC-CCC---CCTTC
T ss_pred --------hEEECcCCccc-ccCCC---CCCCCEEEccCCccCcCC----CCCCcCcEEECCCCCCCc-CCc---ccccC
Confidence 33344444433 22221 255666666666666533 445677777888877774 333 45778
Q ss_pred cEEeccCCccccCCCCCccccccccccccccccccccCchhhcCCC
Q 042123 350 GTLNVSMNNITGGLPREIGNSSQLQAFDLSLNHIVGEIPKELGKLN 395 (849)
Q Consensus 350 ~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~ 395 (849)
+.|+|++|.|+ .+|..+.++++|+.|+|++|.+++..|..+..++
T Consensus 264 ~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 264 LSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp CEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred cEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhcc
Confidence 88888888888 6677788888888888888888877777766554
No 313
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.95 E-value=7.2e-28 Score=258.83 Aligned_cols=224 Identities=19% Similarity=0.218 Sum_probs=113.9
Q ss_pred CCCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEEcCCCcccccCCcCCCCCCCCCEEEc
Q 042123 108 KFLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLNDNQLIGYIPRPFSNLTSVSTLRL 187 (849)
Q Consensus 108 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 187 (849)
.+++.|+|++|+++ .+|..+..+++|++|+|++|.++ .+|..|+++++|++|+|++|++.. .|..|..+++|++|+|
T Consensus 81 ~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~~-lp~~l~~l~~L~~L~L 157 (328)
T 4fcg_A 81 PGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLRA-LPASIASLNRLRELSI 157 (328)
T ss_dssp TTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCCC-CCGGGGGCTTCCEEEE
T ss_pred cceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCcccc-CcHHHhcCcCCCEEEC
Confidence 44555555555555 33444555555555555555555 445555555555555555555553 3444555555555555
Q ss_pred cCCCCcCcCccccc---------CCCCCCEEeccCCcCccCCCcCccCccccchhhhccccccCCCCcchhhhhhhhhhc
Q 042123 188 SRNDLFGSIPDEIG---------KMRSLSVLDLNQNQFKGVLPPSISNLTNLKELALLYNHLSGSIPPSLGNLILRQLLL 258 (849)
Q Consensus 188 s~N~l~~~~~~~~~---------~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~L 258 (849)
++|++.+.+|..+. ++++|++|+|++|+++ .+|..+..+++|++|+|++|.++
T Consensus 158 ~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~----------------- 219 (328)
T 4fcg_A 158 RACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS----------------- 219 (328)
T ss_dssp EEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC-----------------
T ss_pred CCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC-----------------
Confidence 55554445554433 3555555555555555 34444555555555444444443
Q ss_pred cCcCCCCCCCcccCCCCCcceeeecccccccccCCCCCCcccccEEEccCccccCchhhhhCCCCCCCEEeccCccccCc
Q 042123 259 SGNHFTGYLPYNICRGGALEIFTVSENHFQGTIPTSLRNCTSLIRVRLNGNNLTGNISEALGIYPNLTFIDLSRNNFYGE 338 (849)
Q Consensus 259 ~~n~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 338 (849)
+ +|..+..+++|+.|++++|++.+..|..+..+++|++|+|++|.+.+.
T Consensus 220 ------------------------------~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~ 268 (328)
T 4fcg_A 220 ------------------------------A-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLT 268 (328)
T ss_dssp ------------------------------C-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCB
T ss_pred ------------------------------c-CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhh
Confidence 1 222333444444444444444444444444455555555555555445
Q ss_pred ccccCCCCCCCcEEeccCCccccCCCCCccccccccccccccccc
Q 042123 339 ISSNWGKFPKLGTLNVSMNNITGGLPREIGNSSQLQAFDLSLNHI 383 (849)
Q Consensus 339 ~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~N~i 383 (849)
+|..+..+++|++|+|++|.+.+.+|..+.++++|+.+++..|.+
T Consensus 269 ~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~ 313 (328)
T 4fcg_A 269 LPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQ 313 (328)
T ss_dssp CCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGS
T ss_pred cchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHH
Confidence 555555555555555555555555555555555555555554444
No 314
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=4e-29 Score=267.76 Aligned_cols=257 Identities=19% Similarity=0.168 Sum_probs=141.3
Q ss_pred CeEeccCCcccccCCccCCCCCCCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEEcCCC
Q 042123 87 SRLVINDNSLSGFIPPHIGNLKFLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLNDN 166 (849)
Q Consensus 87 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 166 (849)
+.++++.+.+...+...+..+++|++|+|++|+|+++.|..|.++++|++|+|++|.+++..+ |..+++|++|+|++|
T Consensus 13 ~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n 90 (317)
T 3o53_A 13 KIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNN 90 (317)
T ss_dssp EEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSS
T ss_pred eEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCC
Confidence 344555555554444445555667777777777776666666777777777777777664433 666777777777777
Q ss_pred cccccCCcCCCCCCCCCEEEccCCCCcCcCcccccCCCCCCEEeccCCcCccCCCcCccCccccchhhhccccccCCCCc
Q 042123 167 QLIGYIPRPFSNLTSVSTLRLSRNDLFGSIPDEIGKMRSLSVLDLNQNQFKGVLPPSISNLTNLKELALLYNHLSGSIPP 246 (849)
Q Consensus 167 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~ 246 (849)
+++++. ..++|++|++++|++++..+. .+++|++|++++|++++..+..+..+++|++|+|++|.+++..|.
T Consensus 91 ~l~~l~-----~~~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 162 (317)
T 3o53_A 91 YVQELL-----VGPSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFA 162 (317)
T ss_dssp EEEEEE-----ECTTCCEEECCSSCCSEEEEC---CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGG
T ss_pred cccccc-----CCCCcCEEECCCCccCCcCcc---ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHH
Confidence 766543 236777777777777644333 245677777777777766566666666666666666666532222
Q ss_pred chhhhhhhhhhccCcCCCCCCCcccCCCCCcceeeecccccccccCCCCCCcccccEEEccCccccCchhhhhCCCCCCC
Q 042123 247 SLGNLILRQLLLSGNHFTGYLPYNICRGGALEIFTVSENHFQGTIPTSLRNCTSLIRVRLNGNNLTGNISEALGIYPNLT 326 (849)
Q Consensus 247 ~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 326 (849)
.+. ..+++|+.|++++|.+++. +. ...+++|+.|++++|++++.++. +..+++|+
T Consensus 163 ~~~----------------------~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~l~~~-~~~l~~L~ 217 (317)
T 3o53_A 163 ELA----------------------ASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMGPE-FQSAAGVT 217 (317)
T ss_dssp GGG----------------------GGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEECGG-GGGGTTCS
T ss_pred HHh----------------------hccCcCCEEECCCCcCccc-cc-ccccccCCEEECCCCcCCcchhh-hcccCccc
Confidence 111 1223444444444444432 11 11245555555555555543332 44455555
Q ss_pred EEeccCccccCcccccCCCCCCCcEEeccCCccc-cCCCCCccccccccccccc
Q 042123 327 FIDLSRNNFYGEISSNWGKFPKLGTLNVSMNNIT-GGLPREIGNSSQLQAFDLS 379 (849)
Q Consensus 327 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~-~~~p~~~~~l~~L~~L~L~ 379 (849)
.|+|++|++. .+|..+..+++|+.|++++|.++ +..|..+..+++|+.|+++
T Consensus 218 ~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~ 270 (317)
T 3o53_A 218 WISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (317)
T ss_dssp EEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHH
T ss_pred EEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECC
Confidence 5555555554 23444444555555555555554 3344444444444444444
No 315
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=2.3e-29 Score=268.93 Aligned_cols=251 Identities=20% Similarity=0.216 Sum_probs=183.1
Q ss_pred CCCCCCCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccc-cccccccC-------CCCCCCEEEcCCCcccccCCcC
Q 042123 104 IGNLKFLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLS-GSILSSLG-------KLKSLFDLQLNDNQLIGYIPRP 175 (849)
Q Consensus 104 ~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~-------~l~~L~~L~L~~N~l~~~~~~~ 175 (849)
+++.++|++|++++|++ ..|..+... |+.|+|++|.++ ...+..+. ++++|++|+|++|++++..|..
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 114 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPP 114 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCC
T ss_pred EccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHH
Confidence 44455677777777777 344444333 777777777774 23344443 5777888888888877666665
Q ss_pred C--CCCCCCCEEEccCCCCcCcCcccccCC-----CCCCEEeccCCcCccCCCcCccCccccchhhhccccccCCCCcch
Q 042123 176 F--SNLTSVSTLRLSRNDLFGSIPDEIGKM-----RSLSVLDLNQNQFKGVLPPSISNLTNLKELALLYNHLSGSIPPSL 248 (849)
Q Consensus 176 ~--~~l~~L~~L~Ls~N~l~~~~~~~~~~l-----~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~ 248 (849)
+ ..+++|++|+|++|++++. |..+..+ ++|++|+|++|++++..|..|+.+++|++|+|++|++.+.++
T Consensus 115 ~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--- 190 (312)
T 1wwl_A 115 LLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERG--- 190 (312)
T ss_dssp SSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHH---
T ss_pred HHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchH---
Confidence 5 7788888888888888755 6667666 788888888888877777777777777777777776542110
Q ss_pred hhhhhhhhhccCcCCCCCCCcccCCCCCcceeeecccccccccCC--CCCCcccccEEEccCccccC---chhhhhCCCC
Q 042123 249 GNLILRQLLLSGNHFTGYLPYNICRGGALEIFTVSENHFQGTIPT--SLRNCTSLIRVRLNGNNLTG---NISEALGIYP 323 (849)
Q Consensus 249 ~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~--~~~~l~~L~~L~L~~n~l~~---~~~~~~~~l~ 323 (849)
.+. .+..+++|++|++++|++++ .....+..++
T Consensus 191 ------------------------------------------~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~ 228 (312)
T 1wwl_A 191 ------------------------------------------LISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARV 228 (312)
T ss_dssp ------------------------------------------HHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTC
T ss_pred ------------------------------------------HHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCC
Confidence 011 23556777888888888773 3335566788
Q ss_pred CCCEEeccCccccCccc-ccCCCCCCCcEEeccCCccccCCCCCccccccccccccccccccccCchhhcCCCCCcEEEc
Q 042123 324 NLTFIDLSRNNFYGEIS-SNWGKFPKLGTLNVSMNNITGGLPREIGNSSQLQAFDLSLNHIVGEIPKELGKLNPLTKLIL 402 (849)
Q Consensus 324 ~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L 402 (849)
+|+.|+|++|++.+..| ..+..+++|++|+|++|.|+ .+|..+. ++|+.|+|++|+|++. |. +..+++|++|+|
T Consensus 229 ~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L 303 (312)
T 1wwl_A 229 QLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSL 303 (312)
T ss_dssp CCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEEC
T ss_pred CCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEec
Confidence 99999999999987664 45667889999999999998 7787776 8899999999999866 65 899999999999
Q ss_pred cCccccc
Q 042123 403 RGNQITG 409 (849)
Q Consensus 403 ~~N~l~~ 409 (849)
++|++++
T Consensus 304 ~~N~l~~ 310 (312)
T 1wwl_A 304 KGNPFLD 310 (312)
T ss_dssp TTCTTTC
T ss_pred cCCCCCC
Confidence 9999874
No 316
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=9.9e-30 Score=272.49 Aligned_cols=150 Identities=19% Similarity=0.164 Sum_probs=112.7
Q ss_pred CCcceeeecccccccccCCCCCCcccccEEEccCccccCchhhhh-CCCCCCCEEeccCccccCcccccCCCCCCCcEEe
Q 042123 275 GALEIFTVSENHFQGTIPTSLRNCTSLIRVRLNGNNLTGNISEAL-GIYPNLTFIDLSRNNFYGEISSNWGKFPKLGTLN 353 (849)
Q Consensus 275 ~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 353 (849)
++|+.|++++|++++..+..+..+++|+.|++++|.+++..+..+ ..+++|++|+|++|++++... ...+++|++|+
T Consensus 120 ~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~--~~~l~~L~~L~ 197 (317)
T 3o53_A 120 QGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLD 197 (317)
T ss_dssp SSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEE
T ss_pred CCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccccc--ccccccCCEEE
Confidence 345666666666666666667777778888888888877666655 367888888888888875522 23478888888
Q ss_pred ccCCccccCCCCCccccccccccccccccccccCchhhcCCCCCcEEEccCcccc-ccCccccccccccccccccc
Q 042123 354 VSMNNITGGLPREIGNSSQLQAFDLSLNHIVGEIPKELGKLNPLTKLILRGNQIT-GRLPKEIGSLTKLEYLDFSA 428 (849)
Q Consensus 354 Ls~N~i~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~l~~ 428 (849)
|++|.+++ +|..+..+++|+.|+|++|+++ .+|..+..+++|+.|+|++|+++ +.+|..+..+++|+.++++.
T Consensus 198 Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~ 271 (317)
T 3o53_A 198 LSSNKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQT 271 (317)
T ss_dssp CCSSCCCE-ECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHH
T ss_pred CCCCcCCc-chhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCC
Confidence 88888884 4555888888888888888887 46777888888888888888888 77788888888888888763
No 317
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.95 E-value=1.4e-30 Score=305.29 Aligned_cols=419 Identities=14% Similarity=0.105 Sum_probs=236.1
Q ss_pred CCCCCCCCEEeCcCCcc---ccCCCcccc------------CCCCCCEeeCCCCcCcccccccccccCCCCCcc-ccCeE
Q 042123 26 FSSFPHLAYLDLTWNGF---FGTIPPQIS------------NLSNLRYLYLGSNQFSGNILAEVSSESSGGNLR-YMSRL 89 (849)
Q Consensus 26 ~~~l~~L~~L~L~~n~i---~~~~~~~~~------------~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~-~L~~L 89 (849)
+..+++|++|+|+++.. .+..|..++ .+++|++|+|++|.+++..+..+... ++ +|++|
T Consensus 69 ~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~-----~~~~L~~L 143 (592)
T 3ogk_B 69 SRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKA-----RADDLETL 143 (592)
T ss_dssp HHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHH-----HGGGCCEE
T ss_pred HHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCCeEEeeccEecHHHHHHHHHh-----ccccCcEE
Confidence 45567788888876532 123332222 56777777777777664433322110 22 37777
Q ss_pred eccCCc-ccc-cCCccCCCCCCCCEEEccCCcccCCC----CCCCcCCCCCceeeccCccccc----ccccccCCCCCCC
Q 042123 90 VINDNS-LSG-FIPPHIGNLKFLSQLDLTNNKFSGPI----PLSFDNLSNLIFLYLYGNLLSG----SILSSLGKLKSLF 159 (849)
Q Consensus 90 ~l~~n~-l~~-~~~~~~~~l~~L~~L~Ls~n~i~~~~----~~~~~~l~~L~~L~L~~N~l~~----~~~~~~~~l~~L~ 159 (849)
+|++|. ++. .++....++++|++|+|++|.+++.. +..+.++++|++|++++|.+++ ..+..+.++++|+
T Consensus 144 ~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~ 223 (592)
T 3ogk_B 144 KLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLV 223 (592)
T ss_dssp EEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCC
T ss_pred ECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCc
Confidence 777665 211 11122235666777777777665432 2233455666666776666652 2233345566666
Q ss_pred EEEcCCCcccccCCcCCCCCCCCCEEEccCCCCc---CcCcccccCCCCCCEEeccCCcCccCCCcCccCccccchhhhc
Q 042123 160 DLQLNDNQLIGYIPRPFSNLTSVSTLRLSRNDLF---GSIPDEIGKMRSLSVLDLNQNQFKGVLPPSISNLTNLKELALL 236 (849)
Q Consensus 160 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~---~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 236 (849)
.|+|++|.+.++ +..+..+++|++|+++.+... ...+..+..+++|+.|+++++... .+|..+..+++|++|+|+
T Consensus 224 ~L~L~~~~~~~l-~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~-~l~~~~~~~~~L~~L~Ls 301 (592)
T 3ogk_B 224 SVKVGDFEILEL-VGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPN-EMPILFPFAAQIRKLDLL 301 (592)
T ss_dssp EEECSSCBGGGG-HHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTT-TGGGGGGGGGGCCEEEET
T ss_pred EEeccCccHHHH-HHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccchh-HHHHHHhhcCCCcEEecC
Confidence 666666666653 355666666666666643222 122334555666666666664333 345555566666666666
Q ss_pred cccccCCCCcchhhhhhhhhhccCcCCCCCCCcccCCCCCcceeeecccccccccCCCCCCcccccEEEcc---------
Q 042123 237 YNHLSGSIPPSLGNLILRQLLLSGNHFTGYLPYNICRGGALEIFTVSENHFQGTIPTSLRNCTSLIRVRLN--------- 307 (849)
Q Consensus 237 ~N~l~~~~p~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~--------- 307 (849)
+|.+++.. .+..+..+++|+.|+++++-..+.++..+..+++|++|+++
T Consensus 302 ~~~l~~~~----------------------~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~ 359 (592)
T 3ogk_B 302 YALLETED----------------------HCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGME 359 (592)
T ss_dssp TCCCCHHH----------------------HHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTS
T ss_pred CCcCCHHH----------------------HHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccc
Confidence 66543111 01123456678888887332222333344567778888888
Q ss_pred --CccccCch-hhhhCCCCCCCEEeccCccccCcccccCCC-CCCCcEEecc----CCccccC-----CCCCcccccccc
Q 042123 308 --GNNLTGNI-SEALGIYPNLTFIDLSRNNFYGEISSNWGK-FPKLGTLNVS----MNNITGG-----LPREIGNSSQLQ 374 (849)
Q Consensus 308 --~n~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-l~~L~~L~Ls----~N~i~~~-----~p~~~~~l~~L~ 374 (849)
.|.+++.. ...+..+++|++|+++.|.+++..+..+.. +++|+.|+++ .|.+++. ++..+.++++|+
T Consensus 360 ~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~ 439 (592)
T 3ogk_B 360 DEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLR 439 (592)
T ss_dssp STTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCC
T ss_pred cccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCC
Confidence 35665432 223445788888888888877665555554 7788888885 5666642 222355677888
Q ss_pred cccccccc--ccccCchhhc-CCCCCcEEEccCccccc-cCcccccccccccccccccCC----CCChhhhcccccceec
Q 042123 375 AFDLSLNH--IVGEIPKELG-KLNPLTKLILRGNQITG-RLPKEIGSLTKLEYLDFSAIG----ELPSQICNMKSLEKLN 446 (849)
Q Consensus 375 ~L~L~~N~--i~~~~~~~~~-~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~l~~l~----~lp~~~~~l~~L~~L~ 446 (849)
.|+|++|. +++..+..+. .+++|++|+|++|++++ .++..+..+++|++|++++.. .++..+..+++|+.|+
T Consensus 440 ~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ 519 (592)
T 3ogk_B 440 RFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLW 519 (592)
T ss_dssp EEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEE
T ss_pred EEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeE
Confidence 88886433 5544444443 37788888888888775 234444566666666666543 1223345567777777
Q ss_pred cCCcccccCCCccc-cccCCCcEEeccC
Q 042123 447 LSHNNLSGSIPSCF-EGMHGLSFIDMSY 473 (849)
Q Consensus 447 L~~N~l~~~~p~~~-~~l~~L~~l~l~~ 473 (849)
|++|+++......+ ..++.+....+..
T Consensus 520 ls~n~it~~~~~~l~~~~p~l~~~~~~~ 547 (592)
T 3ogk_B 520 VQGYRASMTGQDLMQMARPYWNIELIPS 547 (592)
T ss_dssp EESCBCCTTCTTGGGGCCTTEEEEEECC
T ss_pred CcCCcCCHHHHHHHHHhCCCcEEEEecC
Confidence 77777765433323 3445555444443
No 318
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.94 E-value=5.8e-30 Score=299.89 Aligned_cols=374 Identities=14% Similarity=0.052 Sum_probs=249.6
Q ss_pred CCCCCCEEeCcCCccccCCCccccCC-C-CCCEeeCCCCc-CcccccccccccCCCCCccccCeEeccCCccccc----C
Q 042123 28 SFPHLAYLDLTWNGFFGTIPPQISNL-S-NLRYLYLGSNQ-FSGNILAEVSSESSGGNLRYMSRLVINDNSLSGF----I 100 (849)
Q Consensus 28 ~l~~L~~L~L~~n~i~~~~~~~~~~l-~-~L~~L~L~~N~-l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~----~ 100 (849)
.+++|++|+|++|.+++..+..+... + +|++|+|++|. ++...+. .....+++|++|+|++|.+++. +
T Consensus 110 ~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~-----~~~~~~~~L~~L~L~~~~~~~~~~~~l 184 (592)
T 3ogk_B 110 NLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLL-----SIVTHCRKIKTLLMEESSFSEKDGKWL 184 (592)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHH-----HHHHHCTTCSEEECTTCEEECCCSHHH
T ss_pred hCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHH-----HHHhhCCCCCEEECccccccCcchhHH
Confidence 68999999999999987777777764 4 49999999987 3211111 1123589999999999998765 3
Q ss_pred CccCCCCCCCCEEEccCCcccCC----CCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEEcCCCccc---ccCC
Q 042123 101 PPHIGNLKFLSQLDLTNNKFSGP----IPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLNDNQLI---GYIP 173 (849)
Q Consensus 101 ~~~~~~l~~L~~L~Ls~n~i~~~----~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~---~~~~ 173 (849)
+..+.++++|++|++++|+++++ .+..+.++++|++|++++|.+.+ .+..+.++++|++|+++++... ...+
T Consensus 185 ~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~ 263 (592)
T 3ogk_B 185 HELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKY 263 (592)
T ss_dssp HHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSS
T ss_pred HHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHH
Confidence 33456789999999999999833 34446688999999999999985 6688999999999999864332 2234
Q ss_pred cCCCCCCCCCEEEccCCCCcCcCcccccCCCCCCEEeccCCcCccCCC-cCccCccccchhhhccccccC-CCCcchhhh
Q 042123 174 RPFSNLTSVSTLRLSRNDLFGSIPDEIGKMRSLSVLDLNQNQFKGVLP-PSISNLTNLKELALLYNHLSG-SIPPSLGNL 251 (849)
Q Consensus 174 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~~ 251 (849)
..+..+++|+.|+++++... .+|..+..+++|++|+|++|.++.... ..+..+++|++|+++ +.+.. .++......
T Consensus 264 ~~l~~~~~L~~L~l~~~~~~-~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~ 341 (592)
T 3ogk_B 264 MNLVFPRKLCRLGLSYMGPN-EMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYC 341 (592)
T ss_dssp SCCCCCTTCCEEEETTCCTT-TGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHC
T ss_pred HHhhccccccccCccccchh-HHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhC
Confidence 57788999999999987554 678888899999999999999764333 346889999999999 44432 122222222
Q ss_pred -hhhhhhccC-----------cCCCCCCCcc-cCCCCCcceeeecccccccccCCCCCC-cccccEEEcc----CccccC
Q 042123 252 -ILRQLLLSG-----------NHFTGYLPYN-ICRGGALEIFTVSENHFQGTIPTSLRN-CTSLIRVRLN----GNNLTG 313 (849)
Q Consensus 252 -~L~~L~L~~-----------n~i~~~~~~~-~~~~~~L~~L~l~~N~l~~~~~~~~~~-l~~L~~L~L~----~n~l~~ 313 (849)
.|++|++++ |.++...... ...+++|+.|+++.|.+++..+..+.. +++|+.|+++ .|.+++
T Consensus 342 ~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~ 421 (592)
T 3ogk_B 342 KQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITD 421 (592)
T ss_dssp TTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSS
T ss_pred CCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccC
Confidence 377777772 4444321111 233566777777666666554444443 6667777764 555654
Q ss_pred c-----hhhhhCCCCCCCEEeccCcc--ccCcccccCC-CCCCCcEEeccCCcccc-CCCCCcccccccccccccccccc
Q 042123 314 N-----ISEALGIYPNLTFIDLSRNN--FYGEISSNWG-KFPKLGTLNVSMNNITG-GLPREIGNSSQLQAFDLSLNHIV 384 (849)
Q Consensus 314 ~-----~~~~~~~l~~L~~L~Ls~N~--l~~~~~~~~~-~l~~L~~L~Ls~N~i~~-~~p~~~~~l~~L~~L~L~~N~i~ 384 (849)
. .+..+..+++|+.|+|++|. +++.....+. .+++|++|++++|.+++ .++..+.++++|+.|+|++|.++
T Consensus 422 ~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~ 501 (592)
T 3ogk_B 422 LPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFS 501 (592)
T ss_dssp CCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCB
T ss_pred chHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCc
Confidence 3 33345556667777775432 4433322222 35667777777766654 22333455666677777776665
Q ss_pred cc-CchhhcCCCCCcEEEccCccccc
Q 042123 385 GE-IPKELGKLNPLTKLILRGNQITG 409 (849)
Q Consensus 385 ~~-~~~~~~~l~~L~~L~L~~N~l~~ 409 (849)
+. ++..+..+++|++|+|++|++++
T Consensus 502 ~~~~~~~~~~l~~L~~L~ls~n~it~ 527 (592)
T 3ogk_B 502 ERAIAAAVTKLPSLRYLWVQGYRASM 527 (592)
T ss_dssp HHHHHHHHHHCSSCCEEEEESCBCCT
T ss_pred HHHHHHHHHhcCccCeeECcCCcCCH
Confidence 33 23333456667777777776653
No 319
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.94 E-value=1.8e-26 Score=242.18 Aligned_cols=226 Identities=19% Similarity=0.195 Sum_probs=196.4
Q ss_pred EEecCCCceeeeeCCccCCCCCCCCEEeCcCCccccCCCccccCCCCCCEeeCCCCcCcccccccccccCCCCCccccCe
Q 042123 9 NISLPNIGVNGTLHDFSFSSFPHLAYLDLTWNGFFGTIPPQISNLSNLRYLYLGSNQFSGNILAEVSSESSGGNLRYMSR 88 (849)
Q Consensus 9 ~~~~~~~~~~~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~ 88 (849)
.+++.+.++...... + -++|++|+|++|+++++.+..|.++++|++|+|++|++++ .....|.++++|+.
T Consensus 11 ~~~c~~~~l~~ip~~--l--~~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~------~~~~~~~~l~~L~~ 80 (276)
T 2z62_A 11 TYQCMELNFYKIPDN--L--PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQT------IEDGAYQSLSHLST 80 (276)
T ss_dssp EEECTTSCCSSCCSS--S--CTTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCE------ECTTTTTTCTTCCE
T ss_pred eEEecCCCccccCCC--C--CCCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCc------cCHHHccCCcCCCE
Confidence 356666665433322 2 2579999999999999999899999999999999999974 23456788999999
Q ss_pred EeccCCcccccCCccCCCCCCCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccc-cccccCCCCCCCEEEcCCCc
Q 042123 89 LVINDNSLSGFIPPHIGNLKFLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGS-ILSSLGKLKSLFDLQLNDNQ 167 (849)
Q Consensus 89 L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~L~~N~ 167 (849)
|+|++|.+++..+..|.++++|++|++++|+++++.+..|..+++|++|++++|.+++. .|..|.++++|++|+|++|+
T Consensus 81 L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~ 160 (276)
T 2z62_A 81 LILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNK 160 (276)
T ss_dssp EECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSC
T ss_pred EECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCC
Confidence 99999999998889999999999999999999988888899999999999999999864 58899999999999999999
Q ss_pred ccccCCcCCCCCCCCC----EEEccCCCCcCcCcccccCCCCCCEEeccCCcCccCCCcCccCccccchhhhccccccCC
Q 042123 168 LIGYIPRPFSNLTSVS----TLRLSRNDLFGSIPDEIGKMRSLSVLDLNQNQFKGVLPPSISNLTNLKELALLYNHLSGS 243 (849)
Q Consensus 168 l~~~~~~~~~~l~~L~----~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 243 (849)
++++.+..|..+++|+ +|++++|++++..+..+. ..+|++|++++|++++..+..|..+++|++|+|++|++.+.
T Consensus 161 l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 239 (276)
T 2z62_A 161 IQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 239 (276)
T ss_dssp CCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCC
T ss_pred CCcCCHHHhhhhhhccccceeeecCCCcccccCccccC-CCcccEEECCCCceeecCHhHhcccccccEEEccCCccccc
Confidence 9999888888888877 899999999966665554 45899999999999988777889999999999999999876
Q ss_pred CC
Q 042123 244 IP 245 (849)
Q Consensus 244 ~p 245 (849)
.|
T Consensus 240 c~ 241 (276)
T 2z62_A 240 CP 241 (276)
T ss_dssp TT
T ss_pred CC
Confidence 65
No 320
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.94 E-value=4.9e-26 Score=238.82 Aligned_cols=208 Identities=19% Similarity=0.206 Sum_probs=150.0
Q ss_pred CcceeeecccccccccCCCCCCcccccEEEccCccccCchhhhhCCCCCCCEEeccCccccCcccccCCCCCCCcEEecc
Q 042123 276 ALEIFTVSENHFQGTIPTSLRNCTSLIRVRLNGNNLTGNISEALGIYPNLTFIDLSRNNFYGEISSNWGKFPKLGTLNVS 355 (849)
Q Consensus 276 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 355 (849)
+|+.|++++|++++..+..|.++++|++|++++|++++..+..|..+++|++|+|++|++.+..+..|..+++|++|+++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 56666666666665555566666777777777777766666666667777777777777766666666677777777777
Q ss_pred CCccccCCCCCcccccccccccccccccccc-CchhhcCCCCCcEEEccCccccccCccccccccccc----cccccc--
Q 042123 356 MNNITGGLPREIGNSSQLQAFDLSLNHIVGE-IPKELGKLNPLTKLILRGNQITGRLPKEIGSLTKLE----YLDFSA-- 428 (849)
Q Consensus 356 ~N~i~~~~p~~~~~l~~L~~L~L~~N~i~~~-~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~----~L~l~~-- 428 (849)
+|.+++..+..+..+++|++|++++|.+++. +|..|..+++|+.|+|++|++++..+..+..+++|+ +|+++.
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~ 188 (276)
T 2z62_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 188 (276)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSC
T ss_pred CCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCc
Confidence 7777655555666777777777777777653 466677777777777777777766666666666666 455543
Q ss_pred CCCCChhhhcccccceeccCCcccccCCCccccccCCCcEEeccCCccccCCCCC
Q 042123 429 IGELPSQICNMKSLEKLNLSHNNLSGSIPSCFEGMHGLSFIDMSYNELQCPVPNS 483 (849)
Q Consensus 429 l~~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~ 483 (849)
+..+|.......+|+.|+|++|++++..+..|..+++|+.|++++|+|+|+|+.-
T Consensus 189 l~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~l 243 (276)
T 2z62_A 189 MNFIQPGAFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 243 (276)
T ss_dssp CCEECTTSSCSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTTTT
T ss_pred ccccCccccCCCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCCch
Confidence 5556655555668999999999999888888999999999999999999999864
No 321
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=1.5e-27 Score=270.32 Aligned_cols=236 Identities=21% Similarity=0.234 Sum_probs=143.7
Q ss_pred ccccCeEeccCCcccccCCccCCCCCCCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEE
Q 042123 83 LRYMSRLVINDNSLSGFIPPHIGNLKFLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQ 162 (849)
Q Consensus 83 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 162 (849)
.++|+.|+|++|.+++..|..|.++++|++|+|++|+|++..| |..+++|++|+|++|.|++..+ .++|+.|+
T Consensus 33 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~ 105 (487)
T 3oja_A 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLH 105 (487)
T ss_dssp GGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEE
T ss_pred CCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEEE
Confidence 3455566666666655555566666666666666666665444 6666666666666666653322 25666666
Q ss_pred cCCCcccccCCcCCCCCCCCCEEEccCCCCcCcCcccccCCCCCCEEeccCCcCccCCCcCcc-Cccccchhhhcccccc
Q 042123 163 LNDNQLIGYIPRPFSNLTSVSTLRLSRNDLFGSIPDEIGKMRSLSVLDLNQNQFKGVLPPSIS-NLTNLKELALLYNHLS 241 (849)
Q Consensus 163 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~L~~N~l~ 241 (849)
|++|.+.++.+.. +++|++|+|++|++++..|..|..+++|++|+|++|.+++..|..+. .+++|++|+|++|.++
T Consensus 106 L~~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~ 182 (487)
T 3oja_A 106 AANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY 182 (487)
T ss_dssp CCSSCCCCEEECC---CSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCC
T ss_pred CcCCcCCCCCccc---cCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccc
Confidence 6666666554432 35566666666666655555666666666666666666655555554 4566666666666554
Q ss_pred CCCCcchhhhhhhhhhccCcCCCCCCCcccCCCCCcceeeecccccccccCCCCCCcccccEEEccCccccCchhhhhCC
Q 042123 242 GSIPPSLGNLILRQLLLSGNHFTGYLPYNICRGGALEIFTVSENHFQGTIPTSLRNCTSLIRVRLNGNNLTGNISEALGI 321 (849)
Q Consensus 242 ~~~p~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 321 (849)
+. |. ...+++|+.|+|++|.+++..| .+..+++|+.|+|++|.+++ +|..+..
T Consensus 183 ~~-~~------------------------~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~l~~ 235 (487)
T 3oja_A 183 DV-KG------------------------QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRF 235 (487)
T ss_dssp EE-EC------------------------CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCC
T ss_pred cc-cc------------------------cccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cchhhcc
Confidence 22 11 1234566666777776665333 36677777777777777774 4455677
Q ss_pred CCCCCEEeccCcccc-CcccccCCCCCCCcEEecc
Q 042123 322 YPNLTFIDLSRNNFY-GEISSNWGKFPKLGTLNVS 355 (849)
Q Consensus 322 l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~Ls 355 (849)
+++|+.|++++|.+. +.+|..+..++.|+.|+++
T Consensus 236 l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 236 SQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp CTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred CCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 777777777777776 4555666677777777765
No 322
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=5.2e-27 Score=266.01 Aligned_cols=233 Identities=22% Similarity=0.231 Sum_probs=156.6
Q ss_pred CCCEEEcCCCcccccCCcCCCCCCCCCEEEccCCCCcCcCcccccCCCCCCEEeccCCcCccCCCcCccCccccchhhhc
Q 042123 157 SLFDLQLNDNQLIGYIPRPFSNLTSVSTLRLSRNDLFGSIPDEIGKMRSLSVLDLNQNQFKGVLPPSISNLTNLKELALL 236 (849)
Q Consensus 157 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 236 (849)
+|+.|+|++|.+.++.|..|..+++|++|+|++|.+++..| |..+++|++|+|++|.|+++.+ .++|++|+++
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~L~ 107 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLHAA 107 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEECC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEEECc
Confidence 45555555555554444445555555555555555543322 4455555555555555543211 1344444444
Q ss_pred cccccCCCCcchhhhhhhhhhccCcCCCCCCCcccCCCCCcceeeecccccccccCCCCCCcccccEEEccCccccCchh
Q 042123 237 YNHLSGSIPPSLGNLILRQLLLSGNHFTGYLPYNICRGGALEIFTVSENHFQGTIPTSLRNCTSLIRVRLNGNNLTGNIS 316 (849)
Q Consensus 237 ~N~l~~~~p~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 316 (849)
+|.+++. .+. .+++|+.|++++|.+++..|..+.++++|+.|+|++|.+++..|
T Consensus 108 ~N~l~~~-----------------------~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 161 (487)
T 3oja_A 108 NNNISRV-----------------------SCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNF 161 (487)
T ss_dssp SSCCCCE-----------------------EEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEG
T ss_pred CCcCCCC-----------------------Ccc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcCh
Confidence 4444321 111 12456677777777777777778888889999999999888777
Q ss_pred hhhC-CCCCCCEEeccCccccCcccccCCCCCCCcEEeccCCccccCCCCCccccccccccccccccccccCchhhcCCC
Q 042123 317 EALG-IYPNLTFIDLSRNNFYGEISSNWGKFPKLGTLNVSMNNITGGLPREIGNSSQLQAFDLSLNHIVGEIPKELGKLN 395 (849)
Q Consensus 317 ~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~ 395 (849)
..+. .+++|+.|+|++|.+++..+ +..+++|+.|+|++|.+++ +|..+..+++|+.|+|++|.+++ +|..+..++
T Consensus 162 ~~l~~~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~ 237 (487)
T 3oja_A 162 AELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQ 237 (487)
T ss_dssp GGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCT
T ss_pred HHHhhhCCcccEEecCCCccccccc--cccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEEecCCcCcc-cchhhccCC
Confidence 7775 78899999999999986633 3358899999999999995 45558899999999999999985 677899999
Q ss_pred CCcEEEccCcccc-ccCccccccccccccccc
Q 042123 396 PLTKLILRGNQIT-GRLPKEIGSLTKLEYLDF 426 (849)
Q Consensus 396 ~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~l 426 (849)
+|+.|++++|++. +.+|..+..++.|+.+++
T Consensus 238 ~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~ 269 (487)
T 3oja_A 238 NLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAK 269 (487)
T ss_dssp TCCEEECTTCCBCHHHHHHHHTTCHHHHHHHH
T ss_pred CCCEEEcCCCCCcCcchHHHHHhCCCCcEEec
Confidence 9999999999998 566666666666655554
No 323
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.93 E-value=7.7e-25 Score=228.71 Aligned_cols=207 Identities=29% Similarity=0.276 Sum_probs=168.7
Q ss_pred CCCCEEeCcCCccccCCCccccCCCCCCEeeCCCCcCcccccccccccCCCCCccccCeEeccCCcccccCCccCCCCCC
Q 042123 30 PHLAYLDLTWNGFFGTIPPQISNLSNLRYLYLGSNQFSGNILAEVSSESSGGNLRYMSRLVINDNSLSGFIPPHIGNLKF 109 (849)
Q Consensus 30 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 109 (849)
.+++.+++++++++. +|..+. ++|++|+|++|++++. ....|+++++|++|+|++|.++.+.+..|.++++
T Consensus 16 ~~~~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~l~~~------~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~ 86 (270)
T 2o6q_A 16 NNKNSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLSSL------PSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKN 86 (270)
T ss_dssp TTTTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCSCC------CTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTT
T ss_pred CCCCEEEccCCCCCc-cCCCCC--CCCCEEECcCCCCCee------CHHHhcCCCCCCEEECCCCccCeeChhhhcCCCC
Confidence 456788888888865 343333 5788888888888632 3345677888888888888888776777788888
Q ss_pred CCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEEcCCCcccccCCcCCCCCCCCCEEEccC
Q 042123 110 LSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLNDNQLIGYIPRPFSNLTSVSTLRLSR 189 (849)
Q Consensus 110 L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 189 (849)
|++|+|++|+++++.+..|.++++|++|+|++|.++...+..|.++++|++|+|++|++.++.+..|..+++|++|+|++
T Consensus 87 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 166 (270)
T 2o6q_A 87 LETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYN 166 (270)
T ss_dssp CCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecC
Confidence 99999999998887778888888999999999988887778888889999999999998888888888899999999999
Q ss_pred CCCcCcCcccccCCCCCCEEeccCCcCccCCCcCccCccccchhhhccccccCCCC
Q 042123 190 NDLFGSIPDEIGKMRSLSVLDLNQNQFKGVLPPSISNLTNLKELALLYNHLSGSIP 245 (849)
Q Consensus 190 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p 245 (849)
|++++..+..|.++++|++|+|++|+++++.+..|..+++|+.|+|++|++....+
T Consensus 167 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 222 (270)
T 2o6q_A 167 NQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCN 222 (270)
T ss_dssp SCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSS
T ss_pred CcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCc
Confidence 98887777778888999999999999887777778888899999999998875544
No 324
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.93 E-value=4.5e-25 Score=230.46 Aligned_cols=206 Identities=25% Similarity=0.299 Sum_probs=184.7
Q ss_pred CCcEEEEecCCCceeeeeCCccCCCCCCCCEEeCcCCccccCCCccccCCCCCCEeeCCCCcCcccccccccccCCCCCc
Q 042123 4 AGRVINISLPNIGVNGTLHDFSFSSFPHLAYLDLTWNGFFGTIPPQISNLSNLRYLYLGSNQFSGNILAEVSSESSGGNL 83 (849)
Q Consensus 4 ~~~~~~~~~~~~~~~~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l 83 (849)
.+.++.++++..++...... + .+++++|+|++|++.++.+.+|.++++|++|+|++|+++. .....|.++
T Consensus 15 ~~~~~~l~~~~~~l~~ip~~--~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~------i~~~~~~~l 84 (270)
T 2o6q_A 15 NNNKNSVDCSSKKLTAIPSN--I--PADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQT------LPAGIFKEL 84 (270)
T ss_dssp ETTTTEEECTTSCCSSCCSC--C--CTTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSC------CCTTTTSSC
T ss_pred CCCCCEEEccCCCCCccCCC--C--CCCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCe------eChhhhcCC
Confidence 34566788888887754322 2 2679999999999999999999999999999999999973 234567889
Q ss_pred cccCeEeccCCcccccCCccCCCCCCCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEEc
Q 042123 84 RYMSRLVINDNSLSGFIPPHIGNLKFLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQL 163 (849)
Q Consensus 84 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 163 (849)
++|++|+|++|.+++..+..|.++++|++|+|++|+++++.+..|..+++|++|+|++|.+++..+..|.++++|++|+|
T Consensus 85 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 164 (270)
T 2o6q_A 85 KNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRL 164 (270)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEe
Confidence 99999999999999888888999999999999999999999999999999999999999999887788999999999999
Q ss_pred CCCcccccCCcCCCCCCCCCEEEccCCCCcCcCcccccCCCCCCEEeccCCcCccC
Q 042123 164 NDNQLIGYIPRPFSNLTSVSTLRLSRNDLFGSIPDEIGKMRSLSVLDLNQNQFKGV 219 (849)
Q Consensus 164 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 219 (849)
++|+++++.+..|..+++|++|+|++|++++..+..|..+++|+.|+|++|.+...
T Consensus 165 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 220 (270)
T 2o6q_A 165 YNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCT 220 (270)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCS
T ss_pred cCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCC
Confidence 99999999999999999999999999999977777899999999999999998743
No 325
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.93 E-value=3.3e-26 Score=239.36 Aligned_cols=208 Identities=26% Similarity=0.311 Sum_probs=140.4
Q ss_pred CCCCCCCCEEeCcCCccccCCCccccCCCCCCEeeCCCCcCcccccccccccCCCCCccccCeEeccCCcccccCCccCC
Q 042123 26 FSSFPHLAYLDLTWNGFFGTIPPQISNLSNLRYLYLGSNQFSGNILAEVSSESSGGNLRYMSRLVINDNSLSGFIPPHIG 105 (849)
Q Consensus 26 ~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 105 (849)
+..+++|++|++++|.+.... .+..+++|++|+|++|++++. ..+..+++|++|+|++|.+++..+..|.
T Consensus 37 ~~~l~~L~~L~l~~~~i~~~~--~l~~l~~L~~L~l~~n~l~~~--------~~l~~l~~L~~L~L~~n~l~~~~~~~~~ 106 (272)
T 3rfs_A 37 QNELNSIDQIIANNSDIKSVQ--GIQYLPNVRYLALGGNKLHDI--------SALKELTNLTYLILTGNQLQSLPNGVFD 106 (272)
T ss_dssp HHHHTTCCEEECTTSCCCCCT--TGGGCTTCCEEECTTSCCCCC--------GGGTTCTTCCEEECTTSCCCCCCTTTTT
T ss_pred cccccceeeeeeCCCCccccc--ccccCCCCcEEECCCCCCCCc--------hhhcCCCCCCEEECCCCccCccChhHhc
Confidence 455677777777777775432 367777777777777777531 1345667777777777777766666667
Q ss_pred CCCCCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEEcCCCcccccCCcCCCCCCCCCEE
Q 042123 106 NLKFLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLNDNQLIGYIPRPFSNLTSVSTL 185 (849)
Q Consensus 106 ~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 185 (849)
++++|++|+|++|+++++.+..|.++++|++|+|++|++++..+..|.++++|+.|+|++|+++++.+..|..+++|++|
T Consensus 107 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 186 (272)
T 3rfs_A 107 KLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDL 186 (272)
T ss_dssp TCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEE
Confidence 77777777777777776666667777777777777777776666666777777777777777776666666777777777
Q ss_pred EccCCCCcCcCcccccCCCCCCEEeccCCcCccCCCcCccCccccchhhhccccccCCCCcchhh
Q 042123 186 RLSRNDLFGSIPDEIGKMRSLSVLDLNQNQFKGVLPPSISNLTNLKELALLYNHLSGSIPPSLGN 250 (849)
Q Consensus 186 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 250 (849)
+|++|++++..+..|..+++|+.|++++|.+.+. +++|+.|+++.|.++|.+|..++.
T Consensus 187 ~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~~~ 244 (272)
T 3rfs_A 187 RLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAGS 244 (272)
T ss_dssp ECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTTSC
T ss_pred ECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCcccc
Confidence 7777777766666666677777777777766532 345666666666666666655543
No 326
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.93 E-value=4e-25 Score=231.07 Aligned_cols=231 Identities=25% Similarity=0.227 Sum_probs=206.7
Q ss_pred CCCCCCEEeCcCCccccCCCccccCCCCCCEeeCCCCcCcccccccccccCCCCCccccCeEeccCCcccccCCccCCCC
Q 042123 28 SFPHLAYLDLTWNGFFGTIPPQISNLSNLRYLYLGSNQFSGNILAEVSSESSGGNLRYMSRLVINDNSLSGFIPPHIGNL 107 (849)
Q Consensus 28 ~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 107 (849)
.+.++..+++..+.+..... +..+++|+.|++++|.++. ...+..+++|++|++++|.+.+. ..+.++
T Consensus 17 ~~~~l~~l~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~~--------~~~l~~l~~L~~L~l~~n~l~~~--~~l~~l 84 (272)
T 3rfs_A 17 AFAETIKANLKKKSVTDAVT--QNELNSIDQIIANNSDIKS--------VQGIQYLPNVRYLALGGNKLHDI--SALKEL 84 (272)
T ss_dssp HHHHHHHHHHTCSCTTSEEC--HHHHTTCCEEECTTSCCCC--------CTTGGGCTTCCEEECTTSCCCCC--GGGTTC
T ss_pred hHHHHHHHHhcCcccccccc--cccccceeeeeeCCCCccc--------ccccccCCCCcEEECCCCCCCCc--hhhcCC
Confidence 34556677888888866644 7789999999999999863 22467799999999999999863 589999
Q ss_pred CCCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEEcCCCcccccCCcCCCCCCCCCEEEc
Q 042123 108 KFLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLNDNQLIGYIPRPFSNLTSVSTLRL 187 (849)
Q Consensus 108 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 187 (849)
++|++|+|++|+++++.+..|.++++|++|+|++|++++..+..|.++++|++|+|++|+++++.+..|..+++|++|+|
T Consensus 85 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 164 (272)
T 3rfs_A 85 TNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDL 164 (272)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEEC
Confidence 99999999999999988888999999999999999999888888999999999999999999999999999999999999
Q ss_pred cCCCCcCcCcccccCCCCCCEEeccCCcCccCCCcCccCccccchhhhccccccCCCCcchhhhhhhhhhccCcCCCCCC
Q 042123 188 SRNDLFGSIPDEIGKMRSLSVLDLNQNQFKGVLPPSISNLTNLKELALLYNHLSGSIPPSLGNLILRQLLLSGNHFTGYL 267 (849)
Q Consensus 188 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~L~~n~i~~~~ 267 (849)
++|++++..+..|..+++|++|++++|++++..+..|..+++|++|+|++|++.+..| .++.++++.|.+++.+
T Consensus 165 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~------~l~~l~~~~n~~~g~i 238 (272)
T 3rfs_A 165 SYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP------GIRYLSEWINKHSGVV 238 (272)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT------TTHHHHHHHHHTGGGB
T ss_pred CCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccCc------HHHHHHHHHHhCCCcc
Confidence 9999998888888999999999999999999888889999999999999999987665 3889999999999999
Q ss_pred CcccCCCCC
Q 042123 268 PYNICRGGA 276 (849)
Q Consensus 268 ~~~~~~~~~ 276 (849)
|..++.+..
T Consensus 239 p~~~~~~~~ 247 (272)
T 3rfs_A 239 RNSAGSVAP 247 (272)
T ss_dssp BCTTSCBCG
T ss_pred cCcccccCC
Confidence 988876654
No 327
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.92 E-value=1.9e-24 Score=227.70 Aligned_cols=205 Identities=21% Similarity=0.207 Sum_probs=171.4
Q ss_pred CCCCCCCCEEeCcCCccccCCCccccCCCCCCEeeCCCCcCcccccccccccCCCCCccccCeEeccCCcccccCCccCC
Q 042123 26 FSSFPHLAYLDLTWNGFFGTIPPQISNLSNLRYLYLGSNQFSGNILAEVSSESSGGNLRYMSRLVINDNSLSGFIPPHIG 105 (849)
Q Consensus 26 ~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 105 (849)
+..+++++++++++|+++.+++. +. ++|+.|+|++|++++. ....|.++++|+.|+|++|.|++..+. +
T Consensus 6 ~~~l~~l~~l~~~~~~l~~ip~~-~~--~~l~~L~L~~N~l~~~------~~~~~~~l~~L~~L~L~~n~l~~~~~~--~ 74 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLTALPPD-LP--KDTTILHLSENLLYTF------SLATLMPYTRLTQLNLDRAELTKLQVD--G 74 (290)
T ss_dssp EECSTTCCEEECTTSCCSSCCSC-CC--TTCCEEECTTSCCSEE------EGGGGTTCTTCCEEECTTSCCCEEECC--S
T ss_pred ccccCCccEEECCCCCCCcCCCC-CC--CCCCEEEcCCCcCCcc------CHHHhhcCCCCCEEECCCCccCcccCC--C
Confidence 56788899999999999755443 32 6789999999998742 234567889999999999999865443 7
Q ss_pred CCCCCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEEcCCCcccccCCcCCCCCCCCCEE
Q 042123 106 NLKFLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLNDNQLIGYIPRPFSNLTSVSTL 185 (849)
Q Consensus 106 ~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 185 (849)
.+++|++|+|++|+|+ .+|..+.++++|++|+|++|+|++..+..|.++++|++|+|++|+++++++..|..+++|++|
T Consensus 75 ~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 153 (290)
T 1p9a_G 75 TLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKL 153 (290)
T ss_dssp CCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEE
Confidence 8899999999999998 567788899999999999999998777889999999999999999999888889999999999
Q ss_pred EccCCCCcCcCcccccCCCCCCEEeccCCcCccCCCcCccCccccchhhhccccccCC
Q 042123 186 RLSRNDLFGSIPDEIGKMRSLSVLDLNQNQFKGVLPPSISNLTNLKELALLYNHLSGS 243 (849)
Q Consensus 186 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 243 (849)
+|++|+++...+..|.++++|++|+|++|+++ .+|..+..+++|+.|+|++|++...
T Consensus 154 ~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~ 210 (290)
T 1p9a_G 154 SLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCN 210 (290)
T ss_dssp ECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCS
T ss_pred ECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccCc
Confidence 99999998666677888999999999999998 5677777888899999999988743
No 328
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.91 E-value=4.3e-28 Score=284.20 Aligned_cols=398 Identities=15% Similarity=0.161 Sum_probs=182.9
Q ss_pred CCCCCCCCEEeCcCCcccc---CCC------------ccccCCCCCCEeeCCCCcCcccccccccccCCCCCccccCeEe
Q 042123 26 FSSFPHLAYLDLTWNGFFG---TIP------------PQISNLSNLRYLYLGSNQFSGNILAEVSSESSGGNLRYMSRLV 90 (849)
Q Consensus 26 ~~~l~~L~~L~L~~n~i~~---~~~------------~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~ 90 (849)
+..+++|++|+|++|.... ..| ..+..+++|++|+|++|.+++..+..+. ..+++|+.|+
T Consensus 62 ~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~~l~-----~~~~~L~~L~ 136 (594)
T 2p1m_B 62 IRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLELIA-----KSFKNFKVLV 136 (594)
T ss_dssp HHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHH-----HHCTTCCEEE
T ss_pred HhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHHHHH-----HhCCCCcEEe
Confidence 4556777777777764211 111 1123456666666666666543333221 1245666666
Q ss_pred ccCC-ccccc-CCccCCCCCCCCEEEccCCcccCCCCCCC----cCCCCCceeeccCcc--cccc-cccccCCCCCCCEE
Q 042123 91 INDN-SLSGF-IPPHIGNLKFLSQLDLTNNKFSGPIPLSF----DNLSNLIFLYLYGNL--LSGS-ILSSLGKLKSLFDL 161 (849)
Q Consensus 91 l~~n-~l~~~-~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~----~~l~~L~~L~L~~N~--l~~~-~~~~~~~l~~L~~L 161 (849)
|++| .++.. ++..+.++++|++|+|++|.+++..+..+ ..+++|++|++++|. +... ....+..+++|+.|
T Consensus 137 L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L 216 (594)
T 2p1m_B 137 LSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALERLVTRCPNLKSL 216 (594)
T ss_dssp EESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEE
T ss_pred CCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEE
Confidence 6666 33321 22233355666666666666554332222 244455555555554 2110 11111234555555
Q ss_pred EcCCC-cccccCCcCCCCCCCCCEEEccCCC-------CcCcCcccccCCCCCCEE-eccCCcCccCCCcCccCccccch
Q 042123 162 QLNDN-QLIGYIPRPFSNLTSVSTLRLSRND-------LFGSIPDEIGKMRSLSVL-DLNQNQFKGVLPPSISNLTNLKE 232 (849)
Q Consensus 162 ~L~~N-~l~~~~~~~~~~l~~L~~L~Ls~N~-------l~~~~~~~~~~l~~L~~L-~L~~N~l~~~~~~~~~~l~~L~~ 232 (849)
+|++| .+.+ .+..+..+++|++|+++.+. +. .++..+.++++|+.| .+.+.... .++..+..+++|++
T Consensus 217 ~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~-~l~~~l~~~~~L~~Ls~~~~~~~~-~l~~~~~~~~~L~~ 293 (594)
T 2p1m_B 217 KLNRAVPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYS-GLSVALSGCKELRCLSGFWDAVPA-YLPAVYSVCSRLTT 293 (594)
T ss_dssp ECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHH-HHHHHHHTCTTCCEEECCBTCCGG-GGGGGHHHHTTCCE
T ss_pred ecCCCCcHHH-HHHHHhcCCcceEcccccccCccchhhHH-HHHHHHhcCCCcccccCCcccchh-hHHHHHHhhCCCCE
Confidence 55555 2222 33344445555555543332 12 122234445555555 22222211 22222233444444
Q ss_pred hhhccccccCCCCcchhhhhhhhhhccCcCCCCCC-CcccCCCCCcceeeecccccccc-cCCCCCCcccccEEEc----
Q 042123 233 LALLYNHLSGSIPPSLGNLILRQLLLSGNHFTGYL-PYNICRGGALEIFTVSENHFQGT-IPTSLRNCTSLIRVRL---- 306 (849)
Q Consensus 233 L~L~~N~l~~~~p~~~~~~~L~~L~L~~n~i~~~~-~~~~~~~~~L~~L~l~~N~l~~~-~~~~~~~l~~L~~L~L---- 306 (849)
|+|++|.++ +.. ...+..+++|+.|++++| +... ++.....+++|++|++
T Consensus 294 L~L~~~~l~-----------------------~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~ 349 (594)
T 2p1m_B 294 LNLSYATVQ-----------------------SYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSE 349 (594)
T ss_dssp EECTTCCCC-----------------------HHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSC
T ss_pred EEccCCCCC-----------------------HHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCc
Confidence 444444432 111 111234556666666666 3221 1212223566666666
Q ss_pred -----cCccccCchhhhhC-CCCCCCEEeccCccccCcccccCC-CCCCCcEEecc--C----CccccCC-----CCCcc
Q 042123 307 -----NGNNLTGNISEALG-IYPNLTFIDLSRNNFYGEISSNWG-KFPKLGTLNVS--M----NNITGGL-----PREIG 368 (849)
Q Consensus 307 -----~~n~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~-~l~~L~~L~Ls--~----N~i~~~~-----p~~~~ 368 (849)
+.+.+++.....+. .+++|+.|+++.|.+++.....+. .+++|+.|+++ + |.++... +..+.
T Consensus 350 ~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~ 429 (594)
T 2p1m_B 350 PFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVE 429 (594)
T ss_dssp TTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHH
T ss_pred ccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHh
Confidence 23444433322222 356677776666666544433333 35666777666 3 3444111 11134
Q ss_pred ccccccccccccccccccCchhhcC-CCCCcEEEccCccccccCcccccccccccccccccCCCCChhhhcccccceecc
Q 042123 369 NSSQLQAFDLSLNHIVGEIPKELGK-LNPLTKLILRGNQITGRLPKEIGSLTKLEYLDFSAIGELPSQICNMKSLEKLNL 447 (849)
Q Consensus 369 ~l~~L~~L~L~~N~i~~~~~~~~~~-l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~l~~lp~~~~~l~~L~~L~L 447 (849)
.+++|+.|+|++ .++...+..+.. +++|+.|+|++|.+++..+..+ ...+++|+.|+|
T Consensus 430 ~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l--------------------~~~~~~L~~L~L 488 (594)
T 2p1m_B 430 HCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHV--------------------LSGCDSLRKLEI 488 (594)
T ss_dssp HCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHH--------------------HHHCTTCCEEEE
T ss_pred hCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHH--------------------HhcCCCcCEEEC
Confidence 455666666655 444444444443 5666666666666654333222 123445555555
Q ss_pred CCcccccCCCc-cccccCCCcEEeccCCcc
Q 042123 448 SHNNLSGSIPS-CFEGMHGLSFIDMSYNEL 476 (849)
Q Consensus 448 ~~N~l~~~~p~-~~~~l~~L~~l~l~~N~l 476 (849)
++|.+++..+. ....+++|+.|++++|++
T Consensus 489 ~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~ 518 (594)
T 2p1m_B 489 RDCPFGDKALLANASKLETMRSLWMSSCSV 518 (594)
T ss_dssp ESCSCCHHHHHHTGGGGGGSSEEEEESSCC
T ss_pred cCCCCcHHHHHHHHHhCCCCCEEeeeCCCC
Confidence 55555332222 223345555555555554
No 329
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.91 E-value=3.1e-26 Score=263.09 Aligned_cols=178 Identities=19% Similarity=0.158 Sum_probs=120.2
Q ss_pred eecCCccceEEEE-EecCCcEEEEEEecccCCCC------chhhHHHHHHHHHH------------hhceeecCCeeEEE
Q 042123 595 CIGNGGHASVYRA-ELPSGEVVAVKKFHSLLPCD------QTVDQKEFLTEVEA------------FYGFCSHARHSFLL 655 (849)
Q Consensus 595 ~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~------~~~~~~~~~~ei~~------------~~~~~~~~~~~~lV 655 (849)
..+.|+.|.+..+ +...|+.+|||.+....... .....+++.+|++. +++++.++...|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 3566777777666 44468999999987543211 22334567777663 67888999999999
Q ss_pred EEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccCC
Q 042123 656 YEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLKP 735 (849)
Q Consensus 656 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~~ 735 (849)
|||++||+|.+++.+.. .++.. +|+.||+.||+|+|++ ||+||||||+|||++.+|.+||+|||+|+....
T Consensus 321 MEyv~G~~L~d~i~~~~---~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~ 391 (569)
T 4azs_A 321 MEKLPGRLLSDMLAAGE---EIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQ 391 (569)
T ss_dssp EECCCSEEHHHHHHTTC---CCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC-
T ss_pred EecCCCCcHHHHHHhCC---CCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCCC
Confidence 99999999999997543 35554 5889999999999999 999999999999999999999999999998766
Q ss_pred CCCCeeeccCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 042123 736 DSSNWTEFAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIKGKHP 782 (849)
Q Consensus 736 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~tg~~P 782 (849)
+.......+||+.|+|||++.+ .+..++|+||+|++++++.++..|
T Consensus 392 ~~~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 392 DCSWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp --CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred CCccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 5555566789999999999876 467789999999998887766544
No 330
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.91 E-value=1.3e-23 Score=221.27 Aligned_cols=200 Identities=22% Similarity=0.220 Sum_probs=180.5
Q ss_pred CcEEEEecCCCceeeeeCCccCCCCCCCCEEeCcCCccccCCCccccCCCCCCEeeCCCCcCcccccccccccCCCCCcc
Q 042123 5 GRVINISLPNIGVNGTLHDFSFSSFPHLAYLDLTWNGFFGTIPPQISNLSNLRYLYLGSNQFSGNILAEVSSESSGGNLR 84 (849)
Q Consensus 5 ~~~~~~~~~~~~~~~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~ 84 (849)
-.++.++++.+++...... + .+++++|+|++|++.++.+..|.++++|++|+|++|+|++.. ..+.++
T Consensus 10 ~~l~~l~~~~~~l~~ip~~--~--~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~--------~~~~l~ 77 (290)
T 1p9a_G 10 ASHLEVNCDKRNLTALPPD--L--PKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQ--------VDGTLP 77 (290)
T ss_dssp TTCCEEECTTSCCSSCCSC--C--CTTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEE--------CCSCCT
T ss_pred CCccEEECCCCCCCcCCCC--C--CCCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCccc--------CCCCCC
Confidence 4577889999987654332 2 378999999999999999999999999999999999998421 126799
Q ss_pred ccCeEeccCCcccccCCccCCCCCCCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEEcC
Q 042123 85 YMSRLVINDNSLSGFIPPHIGNLKFLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLN 164 (849)
Q Consensus 85 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 164 (849)
+|+.|+|++|.|+ .+|..+.++++|++|+|++|+|+++.+..|.++++|++|+|++|+|++..+..|.++++|+.|+|+
T Consensus 78 ~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 156 (290)
T 1p9a_G 78 VLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLA 156 (290)
T ss_dssp TCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred cCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECC
Confidence 9999999999999 678889999999999999999999888999999999999999999998888889999999999999
Q ss_pred CCcccccCCcCCCCCCCCCEEEccCCCCcCcCcccccCCCCCCEEeccCCcCcc
Q 042123 165 DNQLIGYIPRPFSNLTSVSTLRLSRNDLFGSIPDEIGKMRSLSVLDLNQNQFKG 218 (849)
Q Consensus 165 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 218 (849)
+|+|+++++..|..+++|++|+|++|+++ .+|..+..+.+|+.|+|++|.+..
T Consensus 157 ~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C 209 (290)
T 1p9a_G 157 NNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLC 209 (290)
T ss_dssp TSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCC
T ss_pred CCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccC
Confidence 99999999999999999999999999998 778888889999999999999974
No 331
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.91 E-value=2.7e-24 Score=220.29 Aligned_cols=197 Identities=21% Similarity=0.241 Sum_probs=160.5
Q ss_pred CCCCEEeCcCCccccCCCccccCCCCCCEeeCCCCc-CcccccccccccCCCCCccccCeEeccC-CcccccCCccCCCC
Q 042123 30 PHLAYLDLTWNGFFGTIPPQISNLSNLRYLYLGSNQ-FSGNILAEVSSESSGGNLRYMSRLVIND-NSLSGFIPPHIGNL 107 (849)
Q Consensus 30 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~~~~~~~l~~L~~L~l~~-n~l~~~~~~~~~~l 107 (849)
++|++|+|++|+++++.+..|.++++|++|+|++|+ +++ .....|.++++|++|++++ |.++++.+..|.++
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~------i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l 104 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQ------LESHSFYNLSKVTHIEIRNTRNLTYIDPDALKEL 104 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCE------ECTTTEESCTTCCEEEEEEETTCCEECTTSEECC
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcce------eCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCC
Confidence 479999999999998888899999999999999997 763 2344567788899999988 88887777888888
Q ss_pred CCCCEEEccCCcccCCCCCCCcCCCCCc---eeeccCc-ccccccccccCCCCCCC-EEEcCCCcccccCCcCCCCCCCC
Q 042123 108 KFLSQLDLTNNKFSGPIPLSFDNLSNLI---FLYLYGN-LLSGSILSSLGKLKSLF-DLQLNDNQLIGYIPRPFSNLTSV 182 (849)
Q Consensus 108 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~---~L~L~~N-~l~~~~~~~~~~l~~L~-~L~L~~N~l~~~~~~~~~~l~~L 182 (849)
++|++|++++|++++ +|. |..+++|+ +|++++| .++...+..|.++++|+ +|++++|+++.+++..|.. ++|
T Consensus 105 ~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L 181 (239)
T 2xwt_C 105 PLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKL 181 (239)
T ss_dssp TTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEE
T ss_pred CCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCC
Confidence 899999999998886 444 88888888 8899988 88877777788888888 8999888888877777776 788
Q ss_pred CEEEccCCC-CcCcCcccccCC-CCCCEEeccCCcCccCCCcCccCccccchhhhccc
Q 042123 183 STLRLSRND-LFGSIPDEIGKM-RSLSVLDLNQNQFKGVLPPSISNLTNLKELALLYN 238 (849)
Q Consensus 183 ~~L~Ls~N~-l~~~~~~~~~~l-~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 238 (849)
++|+|++|+ ++...+..|.++ ++|+.|++++|+++.+.+. .+++|+.|+++++
T Consensus 182 ~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 182 DAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIARNT 236 (239)
T ss_dssp EEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECTTC
T ss_pred CEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeeccCc
Confidence 888998885 886667778888 8888888888888855443 4566777777655
No 332
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.91 E-value=3.3e-28 Score=285.20 Aligned_cols=393 Identities=16% Similarity=0.120 Sum_probs=247.3
Q ss_pred CCCCCCCEEeCcCCccccCCCcccc-CCCCCCEeeCCCC-cCcccccccccccCCCCCccccCeEeccCCcccccCCccC
Q 042123 27 SSFPHLAYLDLTWNGFFGTIPPQIS-NLSNLRYLYLGSN-QFSGNILAEVSSESSGGNLRYMSRLVINDNSLSGFIPPHI 104 (849)
Q Consensus 27 ~~l~~L~~L~L~~n~i~~~~~~~~~-~l~~L~~L~L~~N-~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 104 (849)
..+++|++|+|++|.+++..+..+. .+++|++|+|++| .+++..+..+ +.++++|++|+|++|.+++..+..+
T Consensus 102 ~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~-----~~~~~~L~~L~L~~~~i~~~~~~~l 176 (594)
T 2p1m_B 102 SSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAI-----AATCRNLKELDLRESDVDDVSGHWL 176 (594)
T ss_dssp HHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHH-----HHHCTTCCEEECTTCEEECCCGGGG
T ss_pred HhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHH-----HHhCCCCCEEeCcCCccCCcchHHH
Confidence 3578999999999999887777776 7999999999999 5553222222 2368999999999999886554444
Q ss_pred ----CCCCCCCEEEccCCcccCCCCCC----CcCCCCCceeeccCc-ccccccccccCCCCCCCEEEcCCC-------cc
Q 042123 105 ----GNLKFLSQLDLTNNKFSGPIPLS----FDNLSNLIFLYLYGN-LLSGSILSSLGKLKSLFDLQLNDN-------QL 168 (849)
Q Consensus 105 ----~~l~~L~~L~Ls~n~i~~~~~~~----~~~l~~L~~L~L~~N-~l~~~~~~~~~~l~~L~~L~L~~N-------~l 168 (849)
..+++|++|++++|. ..+.... +.++++|++|+|++| .+.+ ++..+..+++|++|+++.+ .+
T Consensus 177 ~~~~~~~~~L~~L~l~~~~-~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~ 254 (594)
T 2p1m_B 177 SHFPDTYTSLVSLNISCLA-SEVSFSALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVY 254 (594)
T ss_dssp GGSCTTCCCCCEEECTTCC-SCCCHHHHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHH
T ss_pred HHHhhcCCcCcEEEecccC-CcCCHHHHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccCccchhhH
Confidence 367799999999997 2222222 345699999999999 4553 6778889999999996654 34
Q ss_pred cccCCcCCCCCCCCCEE-EccCCCCcCcCcccccCCCCCCEEeccCCcCccCC-CcCccCccccchhhhccccccCCCCc
Q 042123 169 IGYIPRPFSNLTSVSTL-RLSRNDLFGSIPDEIGKMRSLSVLDLNQNQFKGVL-PPSISNLTNLKELALLYNHLSGSIPP 246 (849)
Q Consensus 169 ~~~~~~~~~~l~~L~~L-~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~L~~N~l~~~~p~ 246 (849)
.++. ..+.++++|+.| .+.+... ..++..+..+++|++|+|++|.++... +..+..+++|++|++++| +......
T Consensus 255 ~~l~-~~l~~~~~L~~Ls~~~~~~~-~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~ 331 (594)
T 2p1m_B 255 SGLS-VALSGCKELRCLSGFWDAVP-AYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLE 331 (594)
T ss_dssp HHHH-HHHHTCTTCCEEECCBTCCG-GGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHH
T ss_pred HHHH-HHHhcCCCcccccCCcccch-hhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHH
Confidence 4433 367889999999 5554433 245555667899999999999976432 223567899999999988 4311111
Q ss_pred chhhhhhhhhhccCcCCCCCCCcccCCCCCcceeeec---------ccccccccCCCC-CCcccccEEEccCccccCchh
Q 042123 247 SLGNLILRQLLLSGNHFTGYLPYNICRGGALEIFTVS---------ENHFQGTIPTSL-RNCTSLIRVRLNGNNLTGNIS 316 (849)
Q Consensus 247 ~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~---------~N~l~~~~~~~~-~~l~~L~~L~L~~n~l~~~~~ 316 (849)
.+. ..+++|+.|+++ .+.+++.....+ .++++|+.|.+..|.+++...
T Consensus 332 ~l~----------------------~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~ 389 (594)
T 2p1m_B 332 VLA----------------------STCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAAL 389 (594)
T ss_dssp HHH----------------------HHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHH
T ss_pred HHH----------------------HhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHH
Confidence 111 112344444442 233332211122 235666666666666665444
Q ss_pred hhhC-CCCCCCEEecc--C----ccccCcc-----cccCCCCCCCcEEeccCCccccCCCCCccc-cccccccccccccc
Q 042123 317 EALG-IYPNLTFIDLS--R----NNFYGEI-----SSNWGKFPKLGTLNVSMNNITGGLPREIGN-SSQLQAFDLSLNHI 383 (849)
Q Consensus 317 ~~~~-~l~~L~~L~Ls--~----N~l~~~~-----~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~-l~~L~~L~L~~N~i 383 (849)
..+. .+++|+.|+|+ + |.+++.. +..+..+++|+.|+|++ .+++..+..+.. +++|+.|+|++|.+
T Consensus 390 ~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i 468 (594)
T 2p1m_B 390 ITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGD 468 (594)
T ss_dssp HHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCS
T ss_pred HHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCC
Confidence 4443 46667777776 3 3444211 11244556677777765 444433333433 56677777777776
Q ss_pred cccCchhh-cCCCCCcEEEccCccccccCcc-cccccccccccccccCCCCChhh----hcccccceeccCCccc
Q 042123 384 VGEIPKEL-GKLNPLTKLILRGNQITGRLPK-EIGSLTKLEYLDFSAIGELPSQI----CNMKSLEKLNLSHNNL 452 (849)
Q Consensus 384 ~~~~~~~~-~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~l~~l~~lp~~~----~~l~~L~~L~L~~N~l 452 (849)
++..+..+ ..+++|++|+|++|++++..+. .+..+++|++|++++...-+..+ ..+++|+...+..+.-
T Consensus 469 ~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~lp~l~i~~~~~~~~ 543 (594)
T 2p1m_B 469 SDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERGA 543 (594)
T ss_dssp SHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBHHHHHHHHHHCTTEEEEEECSSSC
T ss_pred cHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCHHHHHHHHHhCCCCEEEEecCCCc
Confidence 55444444 5567777777777777543333 33446777777776654433322 3456666666665543
No 333
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.90 E-value=2.6e-23 Score=214.51 Aligned_cols=179 Identities=25% Similarity=0.265 Sum_probs=90.6
Q ss_pred CCCEEeCcCCccccCCCccccCCCCCCEeeCCCCcCcccccccccccCCCCCccccCeEeccCCcccccCCccCCCCCCC
Q 042123 31 HLAYLDLTWNGFFGTIPPQISNLSNLRYLYLGSNQFSGNILAEVSSESSGGNLRYMSRLVINDNSLSGFIPPHIGNLKFL 110 (849)
Q Consensus 31 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 110 (849)
..+++++++++++.++ ..+. ++|++|+|++|+++ +..+..|.++++|
T Consensus 15 ~~~~l~~~~~~l~~~p-~~~~--~~l~~L~L~~n~l~------------------------------~~~~~~~~~l~~L 61 (251)
T 3m19_A 15 GKKEVDCQGKSLDSVP-SGIP--ADTEKLDLQSTGLA------------------------------TLSDATFRGLTKL 61 (251)
T ss_dssp GGTEEECTTCCCSSCC-SCCC--TTCCEEECTTSCCC------------------------------CCCTTTTTTCTTC
T ss_pred CCeEEecCCCCccccC-CCCC--CCCCEEEccCCCcC------------------------------ccCHhHhcCcccC
Confidence 3456666666665333 2232 45666666666665 3333344444444
Q ss_pred CEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEEcCCCcccccCCcCCCCCCCCCEEEccCC
Q 042123 111 SQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLNDNQLIGYIPRPFSNLTSVSTLRLSRN 190 (849)
Q Consensus 111 ~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 190 (849)
++|+|++|+|+++.+..|.++++|++|+|++|+++...+..|.++++|++|+|++|+|+++.+..|..+++|++|+|++|
T Consensus 62 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 141 (251)
T 3m19_A 62 TWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTN 141 (251)
T ss_dssp CEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCC
Confidence 44444444444444444444445555555555444444444444555555555555555444444455555555555555
Q ss_pred CCcCcCcccccCCCCCCEEeccCCcCccCCCcCccCccccchhhhccccccC
Q 042123 191 DLFGSIPDEIGKMRSLSVLDLNQNQFKGVLPPSISNLTNLKELALLYNHLSG 242 (849)
Q Consensus 191 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 242 (849)
++++..+..|.++++|++|+|++|+++++.+..|..+++|++|+|++|++.+
T Consensus 142 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 193 (251)
T 3m19_A 142 QLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDC 193 (251)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCT
T ss_pred cCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeC
Confidence 5544444445555555555555555554444445555555555555555543
No 334
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.90 E-value=2.2e-23 Score=213.52 Aligned_cols=132 Identities=20% Similarity=0.262 Sum_probs=92.8
Q ss_pred CCCCEEEccCCcccCCCCCCCcCCCCCceeeccCcc-cccccccccCCCCCCCEEEcCC-CcccccCCcCCCCCCCCCEE
Q 042123 108 KFLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNL-LSGSILSSLGKLKSLFDLQLND-NQLIGYIPRPFSNLTSVSTL 185 (849)
Q Consensus 108 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L 185 (849)
++|++|++++|+|+++.+.+|.++++|++|++++|+ ++.+.+..|.++++|++|+|++ |+++.+.+..|.++++|++|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 367777777777776666677777777777777775 7666666777777777777776 77777777777777777777
Q ss_pred EccCCCCcCcCcccccCCCCCC---EEeccCC-cCccCCCcCccCccccc-hhhhcccccc
Q 042123 186 RLSRNDLFGSIPDEIGKMRSLS---VLDLNQN-QFKGVLPPSISNLTNLK-ELALLYNHLS 241 (849)
Q Consensus 186 ~Ls~N~l~~~~~~~~~~l~~L~---~L~L~~N-~l~~~~~~~~~~l~~L~-~L~L~~N~l~ 241 (849)
++++|++++ +|. |..+++|+ +|++++| +++.+.+..|.++++|+ +|++++|+++
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~ 169 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT 169 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC
T ss_pred eCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc
Confidence 777777764 454 66666666 7777777 77666555666666666 6666666554
No 335
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.90 E-value=4.1e-25 Score=241.26 Aligned_cols=154 Identities=20% Similarity=0.196 Sum_probs=95.4
Q ss_pred eEeccCCcccccCCccCCCCCCCCEEEccCCcccCCCC----CCCcCCC-CCceeeccCcccccccccccCCC-----CC
Q 042123 88 RLVINDNSLSGFIPPHIGNLKFLSQLDLTNNKFSGPIP----LSFDNLS-NLIFLYLYGNLLSGSILSSLGKL-----KS 157 (849)
Q Consensus 88 ~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~----~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l-----~~ 157 (849)
.+.+++|.+++.+|..+...++|++|+|++|+|++..+ .+|..++ +|++|+|++|.|++..+..|..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 35677777777777766666668888888888776655 5666777 77777777777776655555553 67
Q ss_pred CCEEEcCCCcccccCCcC----CCCC-CCCCEEEccCCCCcCcCccccc----C-CCCCCEEeccCCcCccCCCcC----
Q 042123 158 LFDLQLNDNQLIGYIPRP----FSNL-TSVSTLRLSRNDLFGSIPDEIG----K-MRSLSVLDLNQNQFKGVLPPS---- 223 (849)
Q Consensus 158 L~~L~L~~N~l~~~~~~~----~~~l-~~L~~L~Ls~N~l~~~~~~~~~----~-l~~L~~L~L~~N~l~~~~~~~---- 223 (849)
|++|+|++|++++..+.. +..+ ++|++|+|++|+++...+..+. . .++|++|+|++|+++...+..
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 777777777776655543 3333 6677777777777655444332 2 246777777777666332222
Q ss_pred ccCcc-ccchhhhcccccc
Q 042123 224 ISNLT-NLKELALLYNHLS 241 (849)
Q Consensus 224 ~~~l~-~L~~L~L~~N~l~ 241 (849)
+..++ +|++|+|++|+++
T Consensus 162 l~~~~~~L~~L~Ls~n~l~ 180 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLA 180 (362)
T ss_dssp HHTSCTTCCEEECTTSCGG
T ss_pred HhcCCccccEeeecCCCCc
Confidence 22222 4555555555444
No 336
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=1.2e-23 Score=224.55 Aligned_cols=203 Identities=19% Similarity=0.129 Sum_probs=96.9
Q ss_pred CCCCEeeCCCCcCcccccccccccCCCCCccccCeEeccCCcccccCC----ccCCCCCCCCEEEccCCcccCCCCCCCc
Q 042123 54 SNLRYLYLGSNQFSGNILAEVSSESSGGNLRYMSRLVINDNSLSGFIP----PHIGNLKFLSQLDLTNNKFSGPIPLSFD 129 (849)
Q Consensus 54 ~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~----~~~~~l~~L~~L~Ls~n~i~~~~~~~~~ 129 (849)
++|++|+|++|++++..+..+.. ..+++|+.|+|++|.+++..+ ..+..+++|++|+|++|+|+++.+..|.
T Consensus 91 ~~L~~L~l~~n~l~~~~~~~~~~----~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~ 166 (310)
T 4glp_A 91 SRLKELTLEDLKITGTMPPLPLE----ATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVR 166 (310)
T ss_dssp SCCCEEEEESCCCBSCCCCCSSS----CCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCC
T ss_pred CceeEEEeeCCEeccchhhhhhh----ccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhc
Confidence 44555555555554332221100 445555555555555554332 2233455555555555555555555555
Q ss_pred CCCCCceeeccCcccccc--c--ccccCCCCCCCEEEcCCCcccccCCc---CCCCCCCCCEEEccCCCCcCcCcccccC
Q 042123 130 NLSNLIFLYLYGNLLSGS--I--LSSLGKLKSLFDLQLNDNQLIGYIPR---PFSNLTSVSTLRLSRNDLFGSIPDEIGK 202 (849)
Q Consensus 130 ~l~~L~~L~L~~N~l~~~--~--~~~~~~l~~L~~L~L~~N~l~~~~~~---~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 202 (849)
++++|++|+|++|++.+. . +..+..+++|++|+|++|+++.+.+. .+..+++|++|+|++|++++..|..+..
T Consensus 167 ~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 246 (310)
T 4glp_A 167 AFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPR 246 (310)
T ss_dssp CCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSS
T ss_pred cCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHh
Confidence 555555555555554321 1 12234555555555555555432111 2344555555555555555444444444
Q ss_pred C---CCCCEEeccCCcCccCCCcCccCccccchhhhccccccCCCCcchhhhhhhhhhccCcCCC
Q 042123 203 M---RSLSVLDLNQNQFKGVLPPSISNLTNLKELALLYNHLSGSIPPSLGNLILRQLLLSGNHFT 264 (849)
Q Consensus 203 l---~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~L~~n~i~ 264 (849)
+ ++|++|+|++|+|+ .+|..+. ++|++|+|++|++++ +|.......|+.|+|++|+++
T Consensus 247 ~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~-~~~~~~l~~L~~L~L~~N~l~ 307 (310)
T 4glp_A 247 CMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNR-APQPDELPEVDNLTLDGNPFL 307 (310)
T ss_dssp CCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCS-CCCTTSCCCCSCEECSSTTTS
T ss_pred ccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCC-CchhhhCCCccEEECcCCCCC
Confidence 3 35555555555555 3343332 455555555555553 222111123555555555554
No 337
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.89 E-value=2.4e-22 Score=207.26 Aligned_cols=177 Identities=27% Similarity=0.322 Sum_probs=126.7
Q ss_pred EEEecCCCceeeeeCCccCCCCCCCCEEeCcCCccccCCCccccCCCCCCEeeCCCCcCcccccccccccCCCCCccccC
Q 042123 8 INISLPNIGVNGTLHDFSFSSFPHLAYLDLTWNGFFGTIPPQISNLSNLRYLYLGSNQFSGNILAEVSSESSGGNLRYMS 87 (849)
Q Consensus 8 ~~~~~~~~~~~~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~ 87 (849)
+.++++..++...... + .+++++|+|++|++.++.+..|.++++|++|+|++|+|++
T Consensus 17 ~~l~~~~~~l~~~p~~--~--~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~------------------- 73 (251)
T 3m19_A 17 KEVDCQGKSLDSVPSG--I--PADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQT------------------- 73 (251)
T ss_dssp TEEECTTCCCSSCCSC--C--CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCC-------------------
T ss_pred eEEecCCCCccccCCC--C--CCCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCc-------------------
Confidence 3577888887654332 2 2689999999999999999999999999999999999873
Q ss_pred eEeccCCcccccCCccCCCCCCCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEEcCCCc
Q 042123 88 RLVINDNSLSGFIPPHIGNLKFLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLNDNQ 167 (849)
Q Consensus 88 ~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 167 (849)
..+..|.++++|++|+|++|+|+++.+..|..+++|++|+|++|+|++..+..|.++++|++|+|++|+
T Consensus 74 -----------~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 142 (251)
T 3m19_A 74 -----------LSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQ 142 (251)
T ss_dssp -----------CCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred -----------cCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCc
Confidence 233445556666666666666665555666666666666666666665555556666777777777777
Q ss_pred ccccCCcCCCCCCCCCEEEccCCCCcCcCcccccCCCCCCEEeccCCcCcc
Q 042123 168 LIGYIPRPFSNLTSVSTLRLSRNDLFGSIPDEIGKMRSLSVLDLNQNQFKG 218 (849)
Q Consensus 168 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 218 (849)
|+++.+..|..+++|++|+|++|++++..+..|..+++|+.|+|++|.+..
T Consensus 143 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 193 (251)
T 3m19_A 143 LQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDC 193 (251)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCT
T ss_pred CCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeC
Confidence 776666667777777777777777776666667777777777777777764
No 338
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.89 E-value=5.6e-25 Score=240.21 Aligned_cols=262 Identities=20% Similarity=0.172 Sum_probs=146.1
Q ss_pred EEEccCCcccCCCCCCCcCCCCCceeeccCcccccccc----cccCCCC-CCCEEEcCCCcccccCCcCCCCC-----CC
Q 042123 112 QLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSIL----SSLGKLK-SLFDLQLNDNQLIGYIPRPFSNL-----TS 181 (849)
Q Consensus 112 ~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~----~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l-----~~ 181 (849)
++++++|++++.+|..+...++|++|+|++|.+++..+ ..|.+++ +|++|+|++|++.+..+..|..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 35667777776666555555557777777777765554 5566666 67777777776666555555553 66
Q ss_pred CCEEEccCCCCcCcCccccc----CC-CCCCEEeccCCcCccCCCcCccC-----ccccchhhhccccccCCCCcchhhh
Q 042123 182 VSTLRLSRNDLFGSIPDEIG----KM-RSLSVLDLNQNQFKGVLPPSISN-----LTNLKELALLYNHLSGSIPPSLGNL 251 (849)
Q Consensus 182 L~~L~Ls~N~l~~~~~~~~~----~l-~~L~~L~L~~N~l~~~~~~~~~~-----l~~L~~L~L~~N~l~~~~p~~~~~~ 251 (849)
|++|+|++|++++..+..+. .+ ++|++|+|++|+++...+..+.. .++|++|+|++|.+++..+..
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~---- 157 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDE---- 157 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHH----
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHH----
Confidence 66666666666655444333 23 56666666666666443333222 134555555555444211111
Q ss_pred hhhhhhccCcCCCCCCCcccCCCCCcceeeecccccccccCCCCCCcc-cccEEEccCccccCchhhh----hCCC-CCC
Q 042123 252 ILRQLLLSGNHFTGYLPYNICRGGALEIFTVSENHFQGTIPTSLRNCT-SLIRVRLNGNNLTGNISEA----LGIY-PNL 325 (849)
Q Consensus 252 ~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~-~L~~L~L~~n~l~~~~~~~----~~~l-~~L 325 (849)
++..+..++ +|++|+|++|++++..+.. +... ++|
T Consensus 158 ---------------------------------------l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L 198 (362)
T 3goz_A 158 ---------------------------------------LIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASV 198 (362)
T ss_dssp ---------------------------------------HHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTC
T ss_pred ---------------------------------------HHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCC
Confidence 111122222 5555555555555444332 2233 366
Q ss_pred CEEeccCccccCc----ccccCCC-CCCCcEEeccCCccccCCC----CCcccccccccccccccccccc-------Cch
Q 042123 326 TFIDLSRNNFYGE----ISSNWGK-FPKLGTLNVSMNNITGGLP----REIGNSSQLQAFDLSLNHIVGE-------IPK 389 (849)
Q Consensus 326 ~~L~Ls~N~l~~~----~~~~~~~-l~~L~~L~Ls~N~i~~~~p----~~~~~l~~L~~L~L~~N~i~~~-------~~~ 389 (849)
+.|||++|.+.+. ++..+.. .++|++|+|++|.+++..+ ..+..+++|+.|+|++|.+... ++.
T Consensus 199 ~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~ 278 (362)
T 3goz_A 199 TSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGA 278 (362)
T ss_dssp CEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHT
T ss_pred CEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHH
Confidence 6666666666542 2333333 2366666666666664333 2345556677777777774433 234
Q ss_pred hhcCCCCCcEEEccCccccccCccccc
Q 042123 390 ELGKLNPLTKLILRGNQITGRLPKEIG 416 (849)
Q Consensus 390 ~~~~l~~L~~L~L~~N~l~~~~p~~~~ 416 (849)
.+..+++|+.|++++|++....+..+.
T Consensus 279 ~~~~l~~L~~LdL~~N~l~~~~~~~~~ 305 (362)
T 3goz_A 279 AFPNIQKIILVDKNGKEIHPSHSIPIS 305 (362)
T ss_dssp TSTTCCEEEEECTTSCBCCGGGCHHHH
T ss_pred HhccCCceEEEecCCCcCCCcchHHHH
Confidence 567788889999999988765554443
No 339
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=9.8e-24 Score=225.15 Aligned_cols=227 Identities=19% Similarity=0.247 Sum_probs=132.9
Q ss_pred CCCEeeCCCCcCcccccccccccCCCCCccccCeEeccCCcccccCCccC--CCCCCCCEEEccCCcccCCCC----CCC
Q 042123 55 NLRYLYLGSNQFSGNILAEVSSESSGGNLRYMSRLVINDNSLSGFIPPHI--GNLKFLSQLDLTNNKFSGPIP----LSF 128 (849)
Q Consensus 55 ~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~--~~l~~L~~L~Ls~n~i~~~~~----~~~ 128 (849)
.++.|.++++.++......+.. +..+++|++|++++|.+.+..|..+ .++++|++|+|++|++++..+ ..+
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~---~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~ 141 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALR---VLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQ 141 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHH---HHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHT
T ss_pred ceeEEEEeCCcCCHHHHHHHHH---hcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHh
Confidence 4666777776665332222111 1123456666666666666666665 666666666666666665333 233
Q ss_pred cCCCCCceeeccCcccccccccccCCCCCCCEEEcCCCcccc---cC-CcCCCCCCCCCEEEccCCCCcCcCcc----cc
Q 042123 129 DNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLNDNQLIG---YI-PRPFSNLTSVSTLRLSRNDLFGSIPD----EI 200 (849)
Q Consensus 129 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~---~~-~~~~~~l~~L~~L~Ls~N~l~~~~~~----~~ 200 (849)
..+++|++|+|++|++++..+..|.++++|++|+|++|++.+ +. +..+..+++|++|+|++|+++ .++. .+
T Consensus 142 ~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~ 220 (310)
T 4glp_A 142 WLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALA 220 (310)
T ss_dssp TBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHH
T ss_pred hhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHH
Confidence 456666666666666665555666666666666666666543 21 222355666666666666665 2222 23
Q ss_pred cCCCCCCEEeccCCcCccCCCcCccCc---cccchhhhccccccCCCCcchhhhhhhhhhccCcCCCCCCCcccCCCCCc
Q 042123 201 GKMRSLSVLDLNQNQFKGVLPPSISNL---TNLKELALLYNHLSGSIPPSLGNLILRQLLLSGNHFTGYLPYNICRGGAL 277 (849)
Q Consensus 201 ~~l~~L~~L~L~~N~l~~~~~~~~~~l---~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L 277 (849)
..+++|++|+|++|++++..|..+..+ ++|++|+|++|+++ .+| ..+. ++|
T Consensus 221 ~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp-----------------------~~~~--~~L 274 (310)
T 4glp_A 221 AAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVP-----------------------KGLP--AKL 274 (310)
T ss_dssp HHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCC-----------------------SCCC--SCC
T ss_pred hcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chh-----------------------hhhc--CCC
Confidence 455666666666666665555555544 45666666666555 333 3332 567
Q ss_pred ceeeecccccccccCCCCCCcccccEEEccCccccC
Q 042123 278 EIFTVSENHFQGTIPTSLRNCTSLIRVRLNGNNLTG 313 (849)
Q Consensus 278 ~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 313 (849)
+.|++++|++++. |. +..+++|+.|++++|+++.
T Consensus 275 ~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 275 RVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp SCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTSC
T ss_pred CEEECCCCcCCCC-ch-hhhCCCccEEECcCCCCCC
Confidence 7777777777753 33 5677888888888888763
No 340
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.89 E-value=1.2e-22 Score=220.50 Aligned_cols=216 Identities=17% Similarity=0.106 Sum_probs=153.0
Q ss_pred EecCCCceeeeeCCccCCCCCCCCEEeCcCCccccCCCccccCCCCCCEeeCCCCcCcccccccccccCCCCCccccCe-
Q 042123 10 ISLPNIGVNGTLHDFSFSSFPHLAYLDLTWNGFFGTIPPQISNLSNLRYLYLGSNQFSGNILAEVSSESSGGNLRYMSR- 88 (849)
Q Consensus 10 ~~~~~~~~~~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~- 88 (849)
+++++.++.....+ + .+++++|+|++|+|+++.+.+|.++++|++|+|++|++.+ ..+..+|.+++++..
T Consensus 14 v~C~~~~Lt~iP~~--l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~-----~i~~~~f~~L~~l~~~ 84 (350)
T 4ay9_X 14 FLCQESKVTEIPSD--L--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLE-----VIEADVFSNLPKLHEI 84 (350)
T ss_dssp EEEESTTCCSCCTT--C--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCC-----EECTTSBCSCTTCCEE
T ss_pred EEecCCCCCccCcC--c--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCC-----ccChhHhhcchhhhhh
Confidence 45666666543222 2 3578888888888888888888888888888888888753 234456677777664
Q ss_pred EeccCCcccccCCccCCCCCCCCEEEccCCcccCCCCCCCcCCCCCceeeccC-cccccccccccCCCC-CCCEEEcCCC
Q 042123 89 LVINDNSLSGFIPPHIGNLKFLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYG-NLLSGSILSSLGKLK-SLFDLQLNDN 166 (849)
Q Consensus 89 L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~-~L~~L~L~~N 166 (849)
+.++.|+|+.+.|..|.++++|++|++++|+|+.+.+..+....++..|++.+ |++..+.+..|.++. .++.|+|++|
T Consensus 85 l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N 164 (350)
T 4ay9_X 85 RIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKN 164 (350)
T ss_dssp EEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSS
T ss_pred hcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccc
Confidence 55667888877777888888888888888888877777777777777887755 567666666676664 5777888888
Q ss_pred cccccCCcCCCCCCCCCEEEccC-CCCcCcCcccccCCCCCCEEeccCCcCccCCCcCccCccccchhhh
Q 042123 167 QLIGYIPRPFSNLTSVSTLRLSR-NDLFGSIPDEIGKMRSLSVLDLNQNQFKGVLPPSISNLTNLKELAL 235 (849)
Q Consensus 167 ~l~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 235 (849)
+|+.+.+..|. ..+|++|++++ |.++...++.|.++++|++|+|++|+|+.+.+..|.++++|+.+++
T Consensus 165 ~i~~i~~~~f~-~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l~~ 233 (350)
T 4ay9_X 165 GIQEIHNSAFN-GTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST 233 (350)
T ss_dssp CCCEECTTSST-TEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEECTTC
T ss_pred cccCCChhhcc-ccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhccchHhhhccC
Confidence 88777666664 35677777764 5666444456777788888888888877665555666666655443
No 341
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.89 E-value=5.1e-23 Score=219.01 Aligned_cols=195 Identities=25% Similarity=0.325 Sum_probs=169.1
Q ss_pred cCCCCCCCCEEeCcCCccccCCCccccCCCCCCEeeCCCCcCcccccccccccCCCCCccccCeEeccCCcccccCCccC
Q 042123 25 SFSSFPHLAYLDLTWNGFFGTIPPQISNLSNLRYLYLGSNQFSGNILAEVSSESSGGNLRYMSRLVINDNSLSGFIPPHI 104 (849)
Q Consensus 25 ~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 104 (849)
.++.+++|++|++++|++..+. .+..+++|++|+|++|++++.. . +..+++|+.|+|++|.+++. ..+
T Consensus 36 ~~~~l~~L~~L~l~~~~i~~l~--~~~~l~~L~~L~L~~n~i~~~~-----~---~~~l~~L~~L~L~~n~l~~~--~~~ 103 (308)
T 1h6u_A 36 TQADLDGITTLSAFGTGVTTIE--GVQYLNNLIGLELKDNQITDLA-----P---LKNLTKITELELSGNPLKNV--SAI 103 (308)
T ss_dssp CHHHHHTCCEEECTTSCCCCCT--TGGGCTTCCEEECCSSCCCCCG-----G---GTTCCSCCEEECCSCCCSCC--GGG
T ss_pred cHHHcCCcCEEEeeCCCccCch--hhhccCCCCEEEccCCcCCCCh-----h---HccCCCCCEEEccCCcCCCc--hhh
Confidence 3556899999999999997653 5899999999999999997421 1 67899999999999999864 478
Q ss_pred CCCCCCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEEcCCCcccccCCcCCCCCCCCCE
Q 042123 105 GNLKFLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLNDNQLIGYIPRPFSNLTSVST 184 (849)
Q Consensus 105 ~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 184 (849)
.++++|++|++++|+++++. .|..+++|++|++++|.+++..+ +..+++|+.|+|++|+++++.+ +..+++|++
T Consensus 104 ~~l~~L~~L~l~~n~l~~~~--~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~ 177 (308)
T 1h6u_A 104 AGLQSIKTLDLTSTQITDVT--PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTT 177 (308)
T ss_dssp TTCTTCCEEECTTSCCCCCG--GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCE
T ss_pred cCCCCCCEEECCCCCCCCch--hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCE
Confidence 99999999999999999754 38999999999999999986544 8899999999999999998654 899999999
Q ss_pred EEccCCCCcCcCcccccCCCCCCEEeccCCcCccCCCcCccCccccchhhhcccccc
Q 042123 185 LRLSRNDLFGSIPDEIGKMRSLSVLDLNQNQFKGVLPPSISNLTNLKELALLYNHLS 241 (849)
Q Consensus 185 L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 241 (849)
|+|++|++++..+ +..+++|++|++++|++++.. .+..+++|++|+|++|+++
T Consensus 178 L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~ 230 (308)
T 1h6u_A 178 LKADDNKISDISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTIT 230 (308)
T ss_dssp EECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEE
T ss_pred EECCCCccCcChh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeee
Confidence 9999999985433 889999999999999999654 3899999999999999997
No 342
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.88 E-value=8.2e-23 Score=221.85 Aligned_cols=150 Identities=16% Similarity=0.131 Sum_probs=77.7
Q ss_pred EeccCCcccccCCccCCCCCCCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccc-cccccCCCCCCCE-EEcCCC
Q 042123 89 LVINDNSLSGFIPPHIGNLKFLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGS-ILSSLGKLKSLFD-LQLNDN 166 (849)
Q Consensus 89 L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~-L~L~~N 166 (849)
++.+++.++ .+|..+. +++++|+|++|+|+.+.+.+|.++++|++|+|++|++.+. .+.+|.++++|++ +.+++|
T Consensus 14 v~C~~~~Lt-~iP~~l~--~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N 90 (350)
T 4ay9_X 14 FLCQESKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKAN 90 (350)
T ss_dssp EEEESTTCC-SCCTTCC--TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEET
T ss_pred EEecCCCCC-ccCcCcC--CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCC
Confidence 444444444 3343331 3555555666655555555555555666666665555332 2344555555443 444445
Q ss_pred cccccCCcCCCCCCCCCEEEccCCCCcCcCcccccCCCCCCEEeccC-CcCccCCCcCccCcc-ccchhhhcccccc
Q 042123 167 QLIGYIPRPFSNLTSVSTLRLSRNDLFGSIPDEIGKMRSLSVLDLNQ-NQFKGVLPPSISNLT-NLKELALLYNHLS 241 (849)
Q Consensus 167 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~-~L~~L~L~~N~l~ 241 (849)
++..+.|++|..+++|++|++++|++....+..+....++..|++.+ |++..+.+..|..+. .++.|+|++|+++
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~ 167 (350)
T 4ay9_X 91 NLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ 167 (350)
T ss_dssp TCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC
T ss_pred cccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccccccc
Confidence 55555555566666666666666665544444444555555555543 445544444454443 3455555555554
No 343
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.87 E-value=1.2e-22 Score=216.07 Aligned_cols=125 Identities=26% Similarity=0.356 Sum_probs=63.5
Q ss_pred CCCCCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEEcCCCcccccCCcCCCCCCCCCEE
Q 042123 106 NLKFLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLNDNQLIGYIPRPFSNLTSVSTL 185 (849)
Q Consensus 106 ~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 185 (849)
++++|++|++++|+++.+ + .+..+++|++|+|++|.+++..+ +.++++|++|+|++|++.++ ..+..+++|++|
T Consensus 39 ~l~~L~~L~l~~~~i~~l-~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~L 112 (308)
T 1h6u_A 39 DLDGITTLSAFGTGVTTI-E-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQSIKTL 112 (308)
T ss_dssp HHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC--GGGTTCTTCCEE
T ss_pred HcCCcCEEEeeCCCccCc-h-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc--hhhcCCCCCCEE
Confidence 445555555555555532 2 35555555555555555553322 55555555555555555543 245555555555
Q ss_pred EccCCCCcCcCcccccCCCCCCEEeccCCcCccCCCcCccCccccchhhhccccc
Q 042123 186 RLSRNDLFGSIPDEIGKMRSLSVLDLNQNQFKGVLPPSISNLTNLKELALLYNHL 240 (849)
Q Consensus 186 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 240 (849)
+|++|++++ ++. +..+++|++|++++|++++..+ +..+++|++|+|++|.+
T Consensus 113 ~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l 163 (308)
T 1h6u_A 113 DLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQV 163 (308)
T ss_dssp ECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCC
T ss_pred ECCCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcC
Confidence 555555553 222 5555555555555555553321 44444444444444433
No 344
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.87 E-value=8.3e-24 Score=228.79 Aligned_cols=149 Identities=15% Similarity=0.185 Sum_probs=85.6
Q ss_pred cCeEeccCCcccccCCccCCCC--CCCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccc-cccccCCCCCCCEEE
Q 042123 86 MSRLVINDNSLSGFIPPHIGNL--KFLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGS-ILSSLGKLKSLFDLQ 162 (849)
Q Consensus 86 L~~L~l~~n~l~~~~~~~~~~l--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~ 162 (849)
++.+++++|.+. +..+..+ ++++.|++++|.+.+..+. +..+++|++|+|++|.+++. .+..+..+++|++|+
T Consensus 49 ~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~ 124 (336)
T 2ast_B 49 WQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLS 124 (336)
T ss_dssp SSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEE
T ss_pred heeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEe
Confidence 445555555543 2334444 5666666666666655444 34566677777777666544 555566666666666
Q ss_pred cCCCcccccCCcCCCCCCCCCEEEccCC-CCcCc-CcccccCCCCCCEEeccCC-cCccC-CCcCccCcc-ccchhhhcc
Q 042123 163 LNDNQLIGYIPRPFSNLTSVSTLRLSRN-DLFGS-IPDEIGKMRSLSVLDLNQN-QFKGV-LPPSISNLT-NLKELALLY 237 (849)
Q Consensus 163 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N-~l~~~-~~~~~~~l~~L~~L~L~~N-~l~~~-~~~~~~~l~-~L~~L~L~~ 237 (849)
|++|.+.+..+..|..+++|++|+|++| .+++. ++..+.++++|++|++++| .+++. ++..+..++ +|++|++++
T Consensus 125 L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~ 204 (336)
T 2ast_B 125 LEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSG 204 (336)
T ss_dssp CTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCS
T ss_pred CcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCC
Confidence 6666666555556666666666666666 45432 4444556666666666666 55532 233344444 444444444
Q ss_pred c
Q 042123 238 N 238 (849)
Q Consensus 238 N 238 (849)
|
T Consensus 205 ~ 205 (336)
T 2ast_B 205 Y 205 (336)
T ss_dssp C
T ss_pred C
Confidence 4
No 345
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.87 E-value=5.6e-25 Score=242.73 Aligned_cols=283 Identities=19% Similarity=0.215 Sum_probs=169.8
Q ss_pred CCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccc----cccCCCCCCCEEEcCCCcccc---cCCcCC------
Q 042123 110 LSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSIL----SSLGKLKSLFDLQLNDNQLIG---YIPRPF------ 176 (849)
Q Consensus 110 L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~----~~~~~l~~L~~L~L~~N~l~~---~~~~~~------ 176 (849)
|+...++...+. .++..+..+++|++|+|++|.++...+ ..|..+++|++|+|++|.+.. ..|..+
T Consensus 11 L~~~~l~~~~~~-~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~ 89 (386)
T 2ca6_A 11 LKLDAITTEDEK-SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQA 89 (386)
T ss_dssp CEESSCCSHHHH-TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHH
T ss_pred cccCCCCHHHHH-HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHH
Confidence 333344444444 445566677778888888887765433 346677777777777754432 223222
Q ss_pred -CCCCCCCEEEccCCCCcC----cCcccccCCCCCCEEeccCCcCccCCCcCccCccccchhhhccccccCCCCcchhhh
Q 042123 177 -SNLTSVSTLRLSRNDLFG----SIPDEIGKMRSLSVLDLNQNQFKGVLPPSISNLTNLKELALLYNHLSGSIPPSLGNL 251 (849)
Q Consensus 177 -~~l~~L~~L~Ls~N~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~ 251 (849)
..+++|++|+|++|++.. .+|..+..+++|++|+|++|.++...+..+... |..+ ..|.+.
T Consensus 90 l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~--l~~l--~~~~~~---------- 155 (386)
T 2ca6_A 90 LLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARA--LQEL--AVNKKA---------- 155 (386)
T ss_dssp HTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHH--HHHH--HHHHHH----------
T ss_pred HhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHH--HHHH--hhhhhc----------
Confidence 566667777777776664 245556666666666666666653222222211 0000 011110
Q ss_pred hhhhhhccCcCCCCCCCcccCCCCCcceeeecccccc-cccC---CCCCCcccccEEEccCccccC-----chhhhhCCC
Q 042123 252 ILRQLLLSGNHFTGYLPYNICRGGALEIFTVSENHFQ-GTIP---TSLRNCTSLIRVRLNGNNLTG-----NISEALGIY 322 (849)
Q Consensus 252 ~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~N~l~-~~~~---~~~~~l~~L~~L~L~~n~l~~-----~~~~~~~~l 322 (849)
+ ..++|+.|++++|+++ ..++ ..+..+++|+.|++++|+++. ..+..+..+
T Consensus 156 --------~------------~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~ 215 (386)
T 2ca6_A 156 --------K------------NAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYC 215 (386)
T ss_dssp --------H------------TCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGC
T ss_pred --------c------------cCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcC
Confidence 0 0035556666666654 2223 345566677777777777762 233366777
Q ss_pred CCCCEEeccCcccc----CcccccCCCCCCCcEEeccCCccccC----CCCCc--cccccccccccccccccc----cCc
Q 042123 323 PNLTFIDLSRNNFY----GEISSNWGKFPKLGTLNVSMNNITGG----LPREI--GNSSQLQAFDLSLNHIVG----EIP 388 (849)
Q Consensus 323 ~~L~~L~Ls~N~l~----~~~~~~~~~l~~L~~L~Ls~N~i~~~----~p~~~--~~l~~L~~L~L~~N~i~~----~~~ 388 (849)
++|+.|+|++|.++ ..++..+..+++|++|+|++|.+++. ++..+ +.+++|+.|+|++|.+++ .+|
T Consensus 216 ~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~ 295 (386)
T 2ca6_A 216 QELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLK 295 (386)
T ss_dssp TTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHH
T ss_pred CCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHH
Confidence 77778888777775 45566677777888888888877754 34444 337788888888888886 367
Q ss_pred hhh-cCCCCCcEEEccCccccccCc--cccc-ccccccccccc
Q 042123 389 KEL-GKLNPLTKLILRGNQITGRLP--KEIG-SLTKLEYLDFS 427 (849)
Q Consensus 389 ~~~-~~l~~L~~L~L~~N~l~~~~p--~~~~-~l~~L~~L~l~ 427 (849)
..+ .++++|++|+|++|++++..+ ..+. .+++++.+++.
T Consensus 296 ~~l~~~l~~L~~L~l~~N~l~~~~~~~~~l~~~l~~~~~~~l~ 338 (386)
T 2ca6_A 296 TVIDEKMPDLLFLELNGNRFSEEDDVVDEIREVFSTRGRGELD 338 (386)
T ss_dssp HHHHHHCTTCCEEECTTSBSCTTSHHHHHHHHHHHHHTCCEEC
T ss_pred HHHHhcCCCceEEEccCCcCCcchhHHHHHHHHhhhcCcchhh
Confidence 766 668999999999999987664 3332 34555544443
No 346
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.86 E-value=1.1e-23 Score=227.86 Aligned_cols=198 Identities=19% Similarity=0.242 Sum_probs=110.2
Q ss_pred CCCEEEccCCCCcCcCcccccCC--CCCCEEeccCCcCccCCCcCccCccccchhhhccccccCC-CCcchhhhhhhhhh
Q 042123 181 SVSTLRLSRNDLFGSIPDEIGKM--RSLSVLDLNQNQFKGVLPPSISNLTNLKELALLYNHLSGS-IPPSLGNLILRQLL 257 (849)
Q Consensus 181 ~L~~L~Ls~N~l~~~~~~~~~~l--~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~~~L~~L~ 257 (849)
.++.|++++|.+. +..+..+ ++++.|++++|.+.+..+. +..+++|++|+|++|.+++. +|
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~------------ 111 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLH------------ 111 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHH------------
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHH------------
Confidence 4678888888775 4556666 7888888888888765544 45677777777777766421 11
Q ss_pred ccCcCCCCCCCcccCCCCCcceeeecccccccccCCCCCCcccccEEEccCc-cccCc-hhhhhCCCCCCCEEeccCc-c
Q 042123 258 LSGNHFTGYLPYNICRGGALEIFTVSENHFQGTIPTSLRNCTSLIRVRLNGN-NLTGN-ISEALGIYPNLTFIDLSRN-N 334 (849)
Q Consensus 258 L~~n~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n-~l~~~-~~~~~~~l~~L~~L~Ls~N-~ 334 (849)
..+..+++|+.|++++|.+++..+..++.+++|++|++++| .+++. .+..+..+++|++|+|++| .
T Consensus 112 -----------~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~ 180 (336)
T 2ast_B 112 -----------GILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFD 180 (336)
T ss_dssp -----------HHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTT
T ss_pred -----------HHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCC
Confidence 12233345555555555555445555555555555555555 44431 3444555555555555555 5
Q ss_pred ccCc-ccccCCCCC-CCcEEeccCC--ccc-cCCCCCcccccccccccccccc-ccccCchhhcCCCCCcEEEccCc
Q 042123 335 FYGE-ISSNWGKFP-KLGTLNVSMN--NIT-GGLPREIGNSSQLQAFDLSLNH-IVGEIPKELGKLNPLTKLILRGN 405 (849)
Q Consensus 335 l~~~-~~~~~~~l~-~L~~L~Ls~N--~i~-~~~p~~~~~l~~L~~L~L~~N~-i~~~~~~~~~~l~~L~~L~L~~N 405 (849)
+++. ++..+..++ +|++|++++| .++ +.+|..+..+++|+.|++++|. +++..+..+..+++|++|++++|
T Consensus 181 l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~ 257 (336)
T 2ast_B 181 FTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRC 257 (336)
T ss_dssp CCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTC
T ss_pred cChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCC
Confidence 5432 344444555 5555555555 232 2233344445555555555555 44444445555555555555555
No 347
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.86 E-value=3.5e-24 Score=236.36 Aligned_cols=150 Identities=15% Similarity=0.134 Sum_probs=111.7
Q ss_pred ccCCcccccCCccCCCCCCCCEEEccCCcccCCC----CCCCcCCCCCceeeccCccc---cccccccc-------CCCC
Q 042123 91 INDNSLSGFIPPHIGNLKFLSQLDLTNNKFSGPI----PLSFDNLSNLIFLYLYGNLL---SGSILSSL-------GKLK 156 (849)
Q Consensus 91 l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~----~~~~~~l~~L~~L~L~~N~l---~~~~~~~~-------~~l~ 156 (849)
+....+. .++..+..+++|++|+|++|+|+... +..|..+++|++|+|++|.+ ++..|..+ ..++
T Consensus 16 l~~~~~~-~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~ 94 (386)
T 2ca6_A 16 ITTEDEK-SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCP 94 (386)
T ss_dssp CCSHHHH-TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCT
T ss_pred CCHHHHH-HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCC
Confidence 3333333 46677888999999999999999653 34588999999999999754 44445444 7899
Q ss_pred CCCEEEcCCCcccc----cCCcCCCCCCCCCEEEccCCCCcCcCccccc----CC---------CCCCEEeccCCcCcc-
Q 042123 157 SLFDLQLNDNQLIG----YIPRPFSNLTSVSTLRLSRNDLFGSIPDEIG----KM---------RSLSVLDLNQNQFKG- 218 (849)
Q Consensus 157 ~L~~L~L~~N~l~~----~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~----~l---------~~L~~L~L~~N~l~~- 218 (849)
+|++|+|++|.+.. ..+..+..+++|++|+|++|.++...+..+. .+ ++|++|+|++|+++.
T Consensus 95 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~ 174 (386)
T 2ca6_A 95 KLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENG 174 (386)
T ss_dssp TCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGG
T ss_pred cccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcH
Confidence 99999999999987 3566788999999999999999754444443 33 889999999998872
Q ss_pred CCC---cCccCccccchhhhcccccc
Q 042123 219 VLP---PSISNLTNLKELALLYNHLS 241 (849)
Q Consensus 219 ~~~---~~~~~l~~L~~L~L~~N~l~ 241 (849)
..+ ..+..+++|++|+|++|.++
T Consensus 175 ~~~~l~~~l~~~~~L~~L~L~~n~l~ 200 (386)
T 2ca6_A 175 SMKEWAKTFQSHRLLHTVKMVQNGIR 200 (386)
T ss_dssp GHHHHHHHHHHCTTCCEEECCSSCCC
T ss_pred HHHHHHHHHHhCCCcCEEECcCCCCC
Confidence 222 24555666666666666554
No 348
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.86 E-value=3.6e-21 Score=192.43 Aligned_cols=178 Identities=26% Similarity=0.258 Sum_probs=130.3
Q ss_pred CEeeCCCCcCcccccccccccCCCCCccccCeEeccCCcccccCCccCCCCCCCCEEEccCCcccCCCCCCCcCCCCCce
Q 042123 57 RYLYLGSNQFSGNILAEVSSESSGGNLRYMSRLVINDNSLSGFIPPHIGNLKFLSQLDLTNNKFSGPIPLSFDNLSNLIF 136 (849)
Q Consensus 57 ~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 136 (849)
+.++++++.++... .+-.++|++|++++|.+++..+..|.++++|++|++++|+++++.+..|..+++|++
T Consensus 10 ~~v~c~~~~l~~~p---------~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 80 (208)
T 2o6s_A 10 TTVECYSQGRTSVP---------TGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTY 80 (208)
T ss_dssp TEEECCSSCCSSCC---------SCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred CEEEecCCCccCCC---------CCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCE
Confidence 56777877775311 112457778888888887766667777888888888888888776667777888888
Q ss_pred eeccCcccccccccccCCCCCCCEEEcCCCcccccCCcCCCCCCCCCEEEccCCCCcCcCcccccCCCCCCEEeccCCcC
Q 042123 137 LYLYGNLLSGSILSSLGKLKSLFDLQLNDNQLIGYIPRPFSNLTSVSTLRLSRNDLFGSIPDEIGKMRSLSVLDLNQNQF 216 (849)
Q Consensus 137 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 216 (849)
|+|++|++++..+..|.++++|++|+|++|+++++.+..|..+++|++|+|++|++++..+..|..+++|++|++++|.+
T Consensus 81 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~ 160 (208)
T 2o6s_A 81 LNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPW 160 (208)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCB
T ss_pred EECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCe
Confidence 88888888766666677788888888888888777777777788888888888887766666677778888888888866
Q ss_pred ccCCCcCccCccccchhhhccccccCCCCcchhh
Q 042123 217 KGVLPPSISNLTNLKELALLYNHLSGSIPPSLGN 250 (849)
Q Consensus 217 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 250 (849)
.+ .+++|++|+++.|.+++.+|..++.
T Consensus 161 ~~-------~~~~l~~L~~~~n~~~g~ip~~~~~ 187 (208)
T 2o6s_A 161 DC-------TCPGIRYLSEWINKHSGVVRNSAGS 187 (208)
T ss_dssp CC-------CTTTTHHHHHHHHHCTTTBBCTTSS
T ss_pred ec-------CCCCHHHHHHHHHhCCceeeccCcc
Confidence 53 3456777777777777777765553
No 349
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.86 E-value=1e-20 Score=189.03 Aligned_cols=180 Identities=24% Similarity=0.227 Sum_probs=96.8
Q ss_pred CEEeCcCCccccCCCccccCCCCCCEeeCCCCcCcccccccccccCCCCCccccCeEeccCCcccccCCccCCCCCCCCE
Q 042123 33 AYLDLTWNGFFGTIPPQISNLSNLRYLYLGSNQFSGNILAEVSSESSGGNLRYMSRLVINDNSLSGFIPPHIGNLKFLSQ 112 (849)
Q Consensus 33 ~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 112 (849)
+.+++++++++.++.. + .++|++|+|++|++++ .....|+.+++|++|++++|.++++.+..|.++++|++
T Consensus 10 ~~v~c~~~~l~~~p~~-~--~~~l~~L~l~~n~l~~------~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 80 (208)
T 2o6s_A 10 TTVECYSQGRTSVPTG-I--PAQTTYLDLETNSLKS------LPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTY 80 (208)
T ss_dssp TEEECCSSCCSSCCSC-C--CTTCSEEECCSSCCCC------CCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred CEEEecCCCccCCCCC-C--CCCCcEEEcCCCccCc------CChhhhcccccCcEEECCCCccCccChhhcCCCCCcCE
Confidence 3455555555433321 1 2355556666555542 12223445555566666666555544445555555666
Q ss_pred EEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEEcCCCcccccCCcCCCCCCCCCEEEccCCCC
Q 042123 113 LDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLNDNQLIGYIPRPFSNLTSVSTLRLSRNDL 192 (849)
Q Consensus 113 L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 192 (849)
|+|++|+|+++.+..|.++++|++|+|++|++++..+..|.++++|+.|+|++|+++++.+..|..+++|++|+|++|.+
T Consensus 81 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~ 160 (208)
T 2o6s_A 81 LNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPW 160 (208)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCB
T ss_pred EECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCe
Confidence 66666655555555555555566666666655554444555555566666666655555555555555566666655554
Q ss_pred cCcCcccccCCCCCCEEeccCCcCccCCCcCccCcc
Q 042123 193 FGSIPDEIGKMRSLSVLDLNQNQFKGVLPPSISNLT 228 (849)
Q Consensus 193 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 228 (849)
.+ .+++|+.|+++.|++++.+|..++.++
T Consensus 161 ~~-------~~~~l~~L~~~~n~~~g~ip~~~~~l~ 189 (208)
T 2o6s_A 161 DC-------TCPGIRYLSEWINKHSGVVRNSAGSVA 189 (208)
T ss_dssp CC-------CTTTTHHHHHHHHHCTTTBBCTTSSBC
T ss_pred ec-------CCCCHHHHHHHHHhCCceeeccCcccc
Confidence 32 234555555555555555555555443
No 350
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.85 E-value=1.3e-21 Score=223.37 Aligned_cols=177 Identities=14% Similarity=0.186 Sum_probs=132.0
Q ss_pred CcCceecCCccceEEEEEecCCcEEEEEEecccCCCCch----hhHHHHHHHHHH-----------hhceeecCCeeEEE
Q 042123 591 DAKYCIGNGGHASVYRAELPSGEVVAVKKFHSLLPCDQT----VDQKEFLTEVEA-----------FYGFCSHARHSFLL 655 (849)
Q Consensus 591 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~----~~~~~~~~ei~~-----------~~~~~~~~~~~~lV 655 (849)
...+.||+|+||.||+|+. .++.+|+|+.......... ...+.+.+|+.. +..++......++|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 3466899999999999965 4788999986543221111 113345666553 24455566778999
Q ss_pred EEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccCC
Q 042123 656 YEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLKP 735 (849)
Q Consensus 656 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~~ 735 (849)
|||+++|+|.+++.. +..++.|++.||+|||++ +|+||||||+||+++. .+||+|||+++....
T Consensus 418 mE~~~ggsL~~~l~~-----------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~ 481 (540)
T 3en9_A 418 MSYINGKLAKDVIED-----------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISNL 481 (540)
T ss_dssp EECCCSEEHHHHSTT-----------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECCC
T ss_pred EECCCCCCHHHHHHH-----------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECCC
Confidence 999999999999864 568999999999999999 9999999999999998 999999999998754
Q ss_pred CCCC-------eeeccCCccccccccccC--CCCCccchHHHHHHHHHHHHhCCCCCC
Q 042123 736 DSSN-------WTEFAGTCGYIAPELAYT--MKITEKCDVYSFGVLMWEVIKGKHPRD 784 (849)
Q Consensus 736 ~~~~-------~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~SlGvil~el~tg~~Pf~ 784 (849)
.... .....||+.|+|||++.. ..|+...|+||..+-..+-+.++.+|.
T Consensus 482 ~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 482 DEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred ccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 3221 135679999999999976 567888999999999999888777763
No 351
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.83 E-value=3e-20 Score=211.86 Aligned_cols=187 Identities=24% Similarity=0.249 Sum_probs=150.8
Q ss_pred CCCEEeCcCCccccCCCccccCCCCCCEeeCCCCcCcccccccccccCCCCCccccCeEeccCCcccccCCccCCCCCCC
Q 042123 31 HLAYLDLTWNGFFGTIPPQISNLSNLRYLYLGSNQFSGNILAEVSSESSGGNLRYMSRLVINDNSLSGFIPPHIGNLKFL 110 (849)
Q Consensus 31 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 110 (849)
+|++|+|++|+|++ +|..+ .++|++|+|++|+|+. ++ ..+++|+.|+|++|.|++ +|. +.+ +|
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~~-ip---------~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L 122 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNL--PPQITVLEITQNALIS-LP---------ELPASLEYLDACDNRLST-LPE-LPA--SL 122 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSCCSC-CC---------CCCTTCCEEECCSSCCSC-CCC-CCT--TC
T ss_pred CccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCCCcc-cc---------cccCCCCEEEccCCCCCC-cch-hhc--CC
Confidence 89999999999987 44444 3789999999999973 21 237899999999999997 565 665 89
Q ss_pred CEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEEcCCCcccccCCcCCCCCCCCCEEEccCC
Q 042123 111 SQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLNDNQLIGYIPRPFSNLTSVSTLRLSRN 190 (849)
Q Consensus 111 ~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 190 (849)
++|+|++|+|++ +|. .+++|+.|+|++|+|++ +|. .+++|+.|+|++|+|+++++ |. ++|++|+|++|
T Consensus 123 ~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~lp~--l~--~~L~~L~Ls~N 190 (571)
T 3cvr_A 123 KHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTFLPE--LP--ESLEALDVSTN 190 (571)
T ss_dssp CEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSCCCC--CC--TTCCEEECCSS
T ss_pred CEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCCcch--hh--CCCCEEECcCC
Confidence 999999999997 444 67899999999999986 444 57899999999999998544 65 89999999999
Q ss_pred CCcCcCcccccCCCCC-------CEEeccCCcCccCCCcCccCccccchhhhccccccCCCCcchhhh
Q 042123 191 DLFGSIPDEIGKMRSL-------SVLDLNQNQFKGVLPPSISNLTNLKELALLYNHLSGSIPPSLGNL 251 (849)
Q Consensus 191 ~l~~~~~~~~~~l~~L-------~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~ 251 (849)
+|+ .+|. |.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|++++.+|..+..+
T Consensus 191 ~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l 253 (571)
T 3cvr_A 191 LLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQ 253 (571)
T ss_dssp CCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHH
T ss_pred CCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHh
Confidence 998 6666 654 77 99999999998 467778889999999999999987777666554
No 352
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.83 E-value=4.1e-20 Score=186.02 Aligned_cols=134 Identities=22% Similarity=0.260 Sum_probs=68.5
Q ss_pred CCCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEEcCCCcccccCCcCCCCCCCCCEEEc
Q 042123 108 KFLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLNDNQLIGYIPRPFSNLTSVSTLRL 187 (849)
Q Consensus 108 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 187 (849)
++|++|+|++|+|+++.+..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+|+.+++..|.++++|++|+|
T Consensus 32 ~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L 111 (220)
T 2v9t_B 32 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLL 111 (220)
T ss_dssp TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEEC
Confidence 34455555555555444444555555555555555554444445555555555555555555544444555555555555
Q ss_pred cCCCCcCcCcccccCCCCCCEEeccCCcCccCCCcCccCccccchhhhcccccc
Q 042123 188 SRNDLFGSIPDEIGKMRSLSVLDLNQNQFKGVLPPSISNLTNLKELALLYNHLS 241 (849)
Q Consensus 188 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 241 (849)
++|+|++..|..|..+++|++|+|++|+|+++.+..|..+++|++|+|++|++.
T Consensus 112 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 112 NANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 555555444445555555555555555555444444555555555555555554
No 353
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.82 E-value=4.3e-20 Score=185.89 Aligned_cols=152 Identities=24% Similarity=0.294 Sum_probs=78.3
Q ss_pred CEeeCCCCcCcccccccccccCCCCCccccCeEeccCCcccccCC-ccCCCCCCCCEEEccCCcccCCCCCCCcCCCCCc
Q 042123 57 RYLYLGSNQFSGNILAEVSSESSGGNLRYMSRLVINDNSLSGFIP-PHIGNLKFLSQLDLTNNKFSGPIPLSFDNLSNLI 135 (849)
Q Consensus 57 ~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~ 135 (849)
+.+++++|.++. +|..+ ...++.|+|++|.|++..+ ..|.++++|++|+|++|+|+++.+.+|.++++|+
T Consensus 14 ~~l~~s~n~l~~-iP~~~--------~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~ 84 (220)
T 2v70_A 14 TTVDCSNQKLNK-IPEHI--------PQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVN 84 (220)
T ss_dssp TEEECCSSCCSS-CCSCC--------CTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCC
T ss_pred CEeEeCCCCccc-CccCC--------CCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCC
Confidence 466666666652 11111 1234455555555554433 3345555555555555555555455555555555
Q ss_pred eeeccCcccccccccccCCCCCCCEEEcCCCcccccCCcCCCCCCCCCEEEccCCCCcCcCcccccCCCCCCEEeccCCc
Q 042123 136 FLYLYGNLLSGSILSSLGKLKSLFDLQLNDNQLIGYIPRPFSNLTSVSTLRLSRNDLFGSIPDEIGKMRSLSVLDLNQNQ 215 (849)
Q Consensus 136 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 215 (849)
+|+|++|+|++..+..|.++++|++|+|++|+|.++.|..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|.
T Consensus 85 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 164 (220)
T 2v70_A 85 EILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANP 164 (220)
T ss_dssp EEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCC
T ss_pred EEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcC
Confidence 55555555554444445555555555555555555555555555555555555555554445555555555555555555
Q ss_pred Cc
Q 042123 216 FK 217 (849)
Q Consensus 216 l~ 217 (849)
+.
T Consensus 165 l~ 166 (220)
T 2v70_A 165 FN 166 (220)
T ss_dssp EE
T ss_pred Cc
Confidence 44
No 354
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.82 E-value=3.6e-20 Score=201.78 Aligned_cols=158 Identities=25% Similarity=0.259 Sum_probs=114.5
Q ss_pred ccCeEeccCCcccccCCccCC-CCCCCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEEc
Q 042123 85 YMSRLVINDNSLSGFIPPHIG-NLKFLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQL 163 (849)
Q Consensus 85 ~L~~L~l~~n~l~~~~~~~~~-~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 163 (849)
.++.|+|++|.|+++.+..|. ++++|++|+|++|+|+++.+.+|.++++|++|+|++|+|+...+..|.++++|+.|+|
T Consensus 40 ~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 119 (361)
T 2xot_A 40 YTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLL 119 (361)
T ss_dssp TCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEEC
Confidence 355566666666656666666 7777777777777777777777777777777777777777666667777788888888
Q ss_pred CCCcccccCCcCCCCCCCCCEEEccCCCCcCcCcccc---cCCCCCCEEeccCCcCccCCCcCccCccc--cchhhhccc
Q 042123 164 NDNQLIGYIPRPFSNLTSVSTLRLSRNDLFGSIPDEI---GKMRSLSVLDLNQNQFKGVLPPSISNLTN--LKELALLYN 238 (849)
Q Consensus 164 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~---~~l~~L~~L~L~~N~l~~~~~~~~~~l~~--L~~L~L~~N 238 (849)
++|+|..+.+..|..+++|++|+|++|+|+...+..| ..+++|+.|+|++|+|+.+.+..|..++. |+.|+|++|
T Consensus 120 ~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N 199 (361)
T 2xot_A 120 YNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNN 199 (361)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSS
T ss_pred CCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCC
Confidence 8888877777778888888888888888875444444 45788888888888888665566777766 377788888
Q ss_pred cccC
Q 042123 239 HLSG 242 (849)
Q Consensus 239 ~l~~ 242 (849)
++..
T Consensus 200 ~~~C 203 (361)
T 2xot_A 200 PLEC 203 (361)
T ss_dssp CEEC
T ss_pred CccC
Confidence 7763
No 355
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.82 E-value=2.5e-20 Score=196.29 Aligned_cols=172 Identities=24% Similarity=0.362 Sum_probs=91.4
Q ss_pred CCCCCCCCEEeCcCCccccCCCccccCCCCCCEeeCCCCcCcccccccccccCCCCCccccCeEeccCCcccccCCccCC
Q 042123 26 FSSFPHLAYLDLTWNGFFGTIPPQISNLSNLRYLYLGSNQFSGNILAEVSSESSGGNLRYMSRLVINDNSLSGFIPPHIG 105 (849)
Q Consensus 26 ~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 105 (849)
+..+++|++|++++|++.++. .+..+++|++|+|++|++++.. . +..+++|+.|+|++|.+++. ..+.
T Consensus 42 ~~~l~~L~~L~l~~~~i~~~~--~~~~l~~L~~L~L~~n~l~~~~-----~---l~~l~~L~~L~l~~n~l~~~--~~l~ 109 (291)
T 1h6t_A 42 QNELNSIDQIIANNSDIKSVQ--GIQYLPNVTKLFLNGNKLTDIK-----P---LANLKNLGWLFLDENKVKDL--SSLK 109 (291)
T ss_dssp HHHHHTCCEEECTTSCCCCCT--TGGGCTTCCEEECCSSCCCCCG-----G---GTTCTTCCEEECCSSCCCCG--GGGT
T ss_pred hhhcCcccEEEccCCCcccCh--hHhcCCCCCEEEccCCccCCCc-----c---cccCCCCCEEECCCCcCCCC--hhhc
Confidence 334566666666666665442 2566666666666666665311 1 44555555555555555532 2355
Q ss_pred CCCCCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEEcCCCcccccCCcCCCCCCCCCEE
Q 042123 106 NLKFLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLNDNQLIGYIPRPFSNLTSVSTL 185 (849)
Q Consensus 106 ~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 185 (849)
++++|++|+|++|+|+++ ..+..+++|++|++++|++++. ..+..+++|+.|+|++|++.++.+ +..+++|++|
T Consensus 110 ~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L 183 (291)
T 1h6t_A 110 DLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNL 183 (291)
T ss_dssp TCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEE
T ss_pred cCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEE
Confidence 555555555555555543 2455555555555555555532 345555555555555555555433 5555555555
Q ss_pred EccCCCCcCcCcccccCCCCCCEEeccCCcCc
Q 042123 186 RLSRNDLFGSIPDEIGKMRSLSVLDLNQNQFK 217 (849)
Q Consensus 186 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 217 (849)
+|++|+++. ++ .+..+++|+.|++++|++.
T Consensus 184 ~L~~N~i~~-l~-~l~~l~~L~~L~l~~n~i~ 213 (291)
T 1h6t_A 184 YLSKNHISD-LR-ALAGLKNLDVLELFSQECL 213 (291)
T ss_dssp ECCSSCCCB-CG-GGTTCTTCSEEEEEEEEEE
T ss_pred ECCCCcCCC-Ch-hhccCCCCCEEECcCCccc
Confidence 555555542 22 2455555555555555554
No 356
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.82 E-value=6.3e-20 Score=209.23 Aligned_cols=189 Identities=25% Similarity=0.355 Sum_probs=108.2
Q ss_pred CCCEEEcCCCcccccCCcCCCCCCCCCEEEccCCCCcCcCcccccCCCCCCEEeccCCcCccCCCcCccCccccchhhhc
Q 042123 157 SLFDLQLNDNQLIGYIPRPFSNLTSVSTLRLSRNDLFGSIPDEIGKMRSLSVLDLNQNQFKGVLPPSISNLTNLKELALL 236 (849)
Q Consensus 157 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 236 (849)
+|+.|+|++|.++++++. + .++|++|+|++|+|+ .+| ..+++|++|+|++|+|++ +|. +.. +|++|+|+
T Consensus 60 ~L~~L~Ls~n~L~~lp~~-l--~~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSSLPDN-L--PPQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSCCCSC-C--CTTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCccCHh-H--cCCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 566666666666553322 2 245666666666665 344 234566666666666654 333 332 44444444
Q ss_pred cccccCCCCcchhhhhhhhhhccCcCCCCCCCcccCCCCCcceeeecccccccccCCCCCCcccccEEEccCccccCchh
Q 042123 237 YNHLSGSIPPSLGNLILRQLLLSGNHFTGYLPYNICRGGALEIFTVSENHFQGTIPTSLRNCTSLIRVRLNGNNLTGNIS 316 (849)
Q Consensus 237 ~N~l~~~~p~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 316 (849)
+|++++ +|. .+++|+.|++++|+|++++.
T Consensus 129 ~N~l~~------------------------------------------------lp~---~l~~L~~L~Ls~N~l~~lp~ 157 (571)
T 3cvr_A 129 NNQLTM------------------------------------------------LPE---LPALLEYINADNNQLTMLPE 157 (571)
T ss_dssp SSCCSC------------------------------------------------CCC---CCTTCCEEECCSSCCSCCCC
T ss_pred CCcCCC------------------------------------------------CCC---cCccccEEeCCCCccCcCCC
Confidence 444431 111 23344444444444443221
Q ss_pred hhhCCCCCCCEEeccCccccCcccccCCCCCCCcEEeccCCccccCCCCCccccccc-------cccccccccccccCch
Q 042123 317 EALGIYPNLTFIDLSRNNFYGEISSNWGKFPKLGTLNVSMNNITGGLPREIGNSSQL-------QAFDLSLNHIVGEIPK 389 (849)
Q Consensus 317 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L-------~~L~L~~N~i~~~~~~ 389 (849)
.+++|+.|+|++|++++ +|. |. ++|+.|+|++|.|+ .+|. |.. +| +.|+|++|+|+ .+|.
T Consensus 158 ----~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~ 224 (571)
T 3cvr_A 158 ----LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPE 224 (571)
T ss_dssp ----CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCG
T ss_pred ----cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCH
Confidence 34455566666666554 333 43 56666666666666 4454 443 55 88888888888 5777
Q ss_pred hhcCCCCCcEEEccCccccccCccccccccc
Q 042123 390 ELGKLNPLTKLILRGNQITGRLPKEIGSLTK 420 (849)
Q Consensus 390 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 420 (849)
.+..+++|+.|+|++|++++.+|..+..++.
T Consensus 225 ~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 255 (571)
T 3cvr_A 225 NILSLDPTCTIILEDNPLSSRIRESLSQQTA 255 (571)
T ss_dssp GGGGSCTTEEEECCSSSCCHHHHHHHHHHHH
T ss_pred HHhcCCCCCEEEeeCCcCCCcCHHHHHHhhc
Confidence 7777999999999999999888887776654
No 357
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.82 E-value=2.4e-20 Score=196.48 Aligned_cols=190 Identities=24% Similarity=0.309 Sum_probs=155.5
Q ss_pred CCCCEEeCcCCccccCCCccccCCCCCCEeeCCCCcCcccccccccccCCCCCccccCeEeccCCcccccCCccCCCCCC
Q 042123 30 PHLAYLDLTWNGFFGTIPPQISNLSNLRYLYLGSNQFSGNILAEVSSESSGGNLRYMSRLVINDNSLSGFIPPHIGNLKF 109 (849)
Q Consensus 30 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 109 (849)
.++..+++..+.+.+..+ +..+++|++|++++|.+++. ..+..+++|+.|+|++|.+++..+ +.++++
T Consensus 24 ~~~~~~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~~~--------~~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~ 91 (291)
T 1h6t_A 24 AETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV--------QGIQYLPNVTKLFLNGNKLTDIKP--LANLKN 91 (291)
T ss_dssp HHHHHHHTTCSCTTSEEC--HHHHHTCCEEECTTSCCCCC--------TTGGGCTTCCEEECCSSCCCCCGG--GTTCTT
T ss_pred HHHHHHHhcCCCcccccc--hhhcCcccEEEccCCCcccC--------hhHhcCCCCCEEEccCCccCCCcc--cccCCC
Confidence 334556677777765544 56788999999999998632 235678999999999999986544 889999
Q ss_pred CCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEEcCCCcccccCCcCCCCCCCCCEEEccC
Q 042123 110 LSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLNDNQLIGYIPRPFSNLTSVSTLRLSR 189 (849)
Q Consensus 110 L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 189 (849)
|++|++++|+++++ + .+..+++|++|+|++|++++. ..+..+++|+.|+|++|+++++ ..+..+++|++|+|++
T Consensus 92 L~~L~l~~n~l~~~-~-~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~ 165 (291)
T 1h6t_A 92 LGWLFLDENKVKDL-S-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLED 165 (291)
T ss_dssp CCEEECCSSCCCCG-G-GGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCS
T ss_pred CCEEECCCCcCCCC-h-hhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccC
Confidence 99999999999864 3 488899999999999999863 5688899999999999999886 6788999999999999
Q ss_pred CCCcCcCcccccCCCCCCEEeccCCcCccCCCcCccCccccchhhhcccccc
Q 042123 190 NDLFGSIPDEIGKMRSLSVLDLNQNQFKGVLPPSISNLTNLKELALLYNHLS 241 (849)
Q Consensus 190 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 241 (849)
|++++..+ +..+++|++|++++|+++.+ + .+..+++|+.|++++|++.
T Consensus 166 N~l~~~~~--l~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~ 213 (291)
T 1h6t_A 166 NQISDIVP--LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECL 213 (291)
T ss_dssp SCCCCCGG--GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEE
T ss_pred Cccccchh--hcCCCccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCccc
Confidence 99985544 88899999999999999864 3 4888999999999999887
No 358
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.81 E-value=8e-20 Score=199.07 Aligned_cols=177 Identities=21% Similarity=0.220 Sum_probs=153.5
Q ss_pred CEEeCcCCccccCCCccccCCCCCCEeeCCCCcCcccccccccccCCCC-CccccCeEeccCCcccccCCccCCCCCCCC
Q 042123 33 AYLDLTWNGFFGTIPPQISNLSNLRYLYLGSNQFSGNILAEVSSESSGG-NLRYMSRLVINDNSLSGFIPPHIGNLKFLS 111 (849)
Q Consensus 33 ~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~-~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 111 (849)
+.+++++|+++.+ |..+. +.++.|+|++|+|++. ....|. .+++|+.|+|++|.|+++.+..|.++++|+
T Consensus 21 ~~l~c~~~~l~~i-P~~~~--~~l~~L~Ls~N~l~~l------~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~ 91 (361)
T 2xot_A 21 NILSCSKQQLPNV-PQSLP--SYTALLDLSHNNLSRL------RAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLR 91 (361)
T ss_dssp TEEECCSSCCSSC-CSSCC--TTCSEEECCSSCCCEE------CTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCC
T ss_pred CEEEeCCCCcCcc-CccCC--CCCCEEECCCCCCCcc------ChhhhhhcccccCEEECCCCcCCccChhhccCCCCCC
Confidence 6899999999754 44343 3589999999999742 234455 799999999999999988888999999999
Q ss_pred EEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEEcCCCcccccCCcCC---CCCCCCCEEEcc
Q 042123 112 QLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLNDNQLIGYIPRPF---SNLTSVSTLRLS 188 (849)
Q Consensus 112 ~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~---~~l~~L~~L~Ls 188 (849)
+|+|++|+|+++.+..|.++++|++|+|++|+|+...+..|.++++|+.|+|++|+|+.+++..| ..+++|++|+|+
T Consensus 92 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~ 171 (361)
T 2xot_A 92 YLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLS 171 (361)
T ss_dssp EEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECC
T ss_pred EEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECC
Confidence 99999999998888899999999999999999998889999999999999999999999888777 679999999999
Q ss_pred CCCCcCcCcccccCCCC--CCEEeccCCcCcc
Q 042123 189 RNDLFGSIPDEIGKMRS--LSVLDLNQNQFKG 218 (849)
Q Consensus 189 ~N~l~~~~~~~~~~l~~--L~~L~L~~N~l~~ 218 (849)
+|+|+...+..|..++. |+.|+|++|.+..
T Consensus 172 ~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C 203 (361)
T 2xot_A 172 SNKLKKLPLTDLQKLPAWVKNGLYLHNNPLEC 203 (361)
T ss_dssp SSCCCCCCHHHHHHSCHHHHTTEECCSSCEEC
T ss_pred CCCCCccCHHHhhhccHhhcceEEecCCCccC
Confidence 99999777778888887 4899999999973
No 359
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.81 E-value=5.1e-20 Score=212.52 Aligned_cols=188 Identities=24% Similarity=0.310 Sum_probs=99.0
Q ss_pred CCEEeCcCCccccCCCccccCCCCCCEeeCCCCcCcccccccccccCCCCCccccCeEeccCCcccccCCccCCCCCCCC
Q 042123 32 LAYLDLTWNGFFGTIPPQISNLSNLRYLYLGSNQFSGNILAEVSSESSGGNLRYMSRLVINDNSLSGFIPPHIGNLKFLS 111 (849)
Q Consensus 32 L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 111 (849)
+..++|+.+.+.++.+ +..+++|+.|+|++|.++.. ..+..+++|+.|+|++|.|.+..| +.++++|+
T Consensus 23 l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~l--------~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~ 90 (605)
T 1m9s_A 23 TIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV--------QGIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLG 90 (605)
T ss_dssp HHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCCC--------TTGGGCTTCCEEECTTSCCCCCGG--GGGCTTCC
T ss_pred HHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCCC--------hHHccCCCCCEEEeeCCCCCCChh--hccCCCCC
Confidence 3344444444443333 34455555555555555421 123445555555555555554332 55555555
Q ss_pred EEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEEcCCCcccccCCcCCCCCCCCCEEEccCCC
Q 042123 112 QLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLNDNQLIGYIPRPFSNLTSVSTLRLSRND 191 (849)
Q Consensus 112 ~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 191 (849)
.|+|++|+|+++ | .|..+++|+.|+|++|.|++. ..+..+++|+.|+|++|++.++ ..|..+++|++|+|++|+
T Consensus 91 ~L~Ls~N~l~~l-~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~ 164 (605)
T 1m9s_A 91 WLFLDENKIKDL-S-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQ 164 (605)
T ss_dssp EEECCSSCCCCC-T-TSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSC
T ss_pred EEECcCCCCCCC-h-hhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCc
Confidence 555555555532 2 455555555555555555532 3355555566666666655554 445555666666666666
Q ss_pred CcCcCcccccCCCCCCEEeccCCcCccCCCcCccCccccchhhhcccccc
Q 042123 192 LFGSIPDEIGKMRSLSVLDLNQNQFKGVLPPSISNLTNLKELALLYNHLS 241 (849)
Q Consensus 192 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 241 (849)
|.+..| +..+++|+.|+|++|+|+++ +.+..+++|+.|+|++|++.
T Consensus 165 l~~~~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~ 210 (605)
T 1m9s_A 165 ISDIVP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECL 210 (605)
T ss_dssp CCCCGG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEE
T ss_pred CCCchh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCc
Confidence 554333 55556666666666665543 24555556666666666554
No 360
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.81 E-value=2e-19 Score=181.02 Aligned_cols=155 Identities=23% Similarity=0.219 Sum_probs=138.1
Q ss_pred CEEeCcCCccccCCCccccCCCCCCEeeCCCCcCcccccccccccCCCCCccccCeEeccCCcccccCCccCCCCCCCCE
Q 042123 33 AYLDLTWNGFFGTIPPQISNLSNLRYLYLGSNQFSGNILAEVSSESSGGNLRYMSRLVINDNSLSGFIPPHIGNLKFLSQ 112 (849)
Q Consensus 33 ~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 112 (849)
+.+++++|+++++ |..+. +.+++|+|++|+|++. .....|..+++|+.|+|++|.|+++.+..|.++++|++
T Consensus 14 ~~l~~s~n~l~~i-P~~~~--~~~~~L~L~~N~l~~~-----~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~ 85 (220)
T 2v70_A 14 TTVDCSNQKLNKI-PEHIP--QYTAELRLNNNEFTVL-----EATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNE 85 (220)
T ss_dssp TEEECCSSCCSSC-CSCCC--TTCSEEECCSSCCCEE-----CCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCE
T ss_pred CEeEeCCCCcccC-ccCCC--CCCCEEEcCCCcCCcc-----CchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCE
Confidence 5899999999764 44443 3568999999999743 23445788999999999999999888889999999999
Q ss_pred EEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEEcCCCcccccCCcCCCCCCCCCEEEccCCCC
Q 042123 113 LDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLNDNQLIGYIPRPFSNLTSVSTLRLSRNDL 192 (849)
Q Consensus 113 L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 192 (849)
|+|++|+|+++.+..|.++++|++|+|++|+|++..+..|.++++|+.|+|++|+|+++.|..|..+++|++|+|++|.+
T Consensus 86 L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 165 (220)
T 2v70_A 86 ILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPF 165 (220)
T ss_dssp EECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCE
T ss_pred EECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCC
Confidence 99999999998888999999999999999999988899999999999999999999999999999999999999999999
Q ss_pred cCc
Q 042123 193 FGS 195 (849)
Q Consensus 193 ~~~ 195 (849)
...
T Consensus 166 ~c~ 168 (220)
T 2v70_A 166 NCN 168 (220)
T ss_dssp ECS
T ss_pred cCC
Confidence 743
No 361
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.81 E-value=1.2e-19 Score=183.84 Aligned_cols=157 Identities=19% Similarity=0.215 Sum_probs=121.5
Q ss_pred ccEEEccCccccCchhhhhCCCCCCCEEeccCccccCcccccCCCCCCCcEEeccCCccccCCCCCcccccccccccccc
Q 042123 301 LIRVRLNGNNLTGNISEALGIYPNLTFIDLSRNNFYGEISSNWGKFPKLGTLNVSMNNITGGLPREIGNSSQLQAFDLSL 380 (849)
Q Consensus 301 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~ 380 (849)
-+.++.+++.++.++.. ..++|++|+|++|++.+..+..|..+++|+.|+|++|.|+...+..|.++++|+.|+|++
T Consensus 21 ~~~v~c~~~~l~~ip~~---~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 97 (229)
T 3e6j_A 21 GTTVDCRSKRHASVPAG---IPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGT 97 (229)
T ss_dssp TTEEECTTSCCSSCCSC---CCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEeEccCCCcCccCCC---CCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCC
Confidence 44566666666644332 226777788888887777777777788888888888888755556677788888888888
Q ss_pred ccccccCchhhcCCCCCcEEEccCccccccCcccccccccccccccccCCCCChhhhcccccceeccCCcccccCCCccc
Q 042123 381 NHIVGEIPKELGKLNPLTKLILRGNQITGRLPKEIGSLTKLEYLDFSAIGELPSQICNMKSLEKLNLSHNNLSGSIPSCF 460 (849)
Q Consensus 381 N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~l~~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~ 460 (849)
|+|++..+..|..+++|++|+|++|+|+ .+ |..+..+++|+.|+|++|+|++..+..|
T Consensus 98 N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~l---------------------p~~~~~l~~L~~L~L~~N~l~~~~~~~~ 155 (229)
T 3e6j_A 98 NQLTVLPSAVFDRLVHLKELFMCCNKLT-EL---------------------PRGIERLTHLTHLALDQNQLKSIPHGAF 155 (229)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCC-SC---------------------CTTGGGCTTCSEEECCSSCCCCCCTTTT
T ss_pred CcCCccChhHhCcchhhCeEeccCCccc-cc---------------------CcccccCCCCCEEECCCCcCCccCHHHH
Confidence 8888776777788888888888888876 33 4445566778888999999998888889
Q ss_pred cccCCCcEEeccCCccccCCCC
Q 042123 461 EGMHGLSFIDMSYNELQCPVPN 482 (849)
Q Consensus 461 ~~l~~L~~l~l~~N~l~~~~~~ 482 (849)
..+++|+.|++++|+|.|.|+.
T Consensus 156 ~~l~~L~~L~l~~N~~~c~c~~ 177 (229)
T 3e6j_A 156 DRLSSLTHAYLFGNPWDCECRD 177 (229)
T ss_dssp TTCTTCCEEECTTSCBCTTBGG
T ss_pred hCCCCCCEEEeeCCCccCCcch
Confidence 9999999999999999999874
No 362
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.81 E-value=2.7e-19 Score=181.29 Aligned_cols=156 Identities=26% Similarity=0.292 Sum_probs=124.8
Q ss_pred cCeEeccCCcccccCCccCCCCCCCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEEcCC
Q 042123 86 MSRLVINDNSLSGFIPPHIGNLKFLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLND 165 (849)
Q Consensus 86 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 165 (849)
-+.++++++.+. .+|..+. ++|++|+|++|+|+++.|..|.++++|++|+|++|+|+...+..|.++++|+.|+|++
T Consensus 21 ~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 97 (229)
T 3e6j_A 21 GTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGT 97 (229)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCC
Confidence 455666666666 3444443 7788888888888887788888888888888888888766667788888888888888
Q ss_pred CcccccCCcCCCCCCCCCEEEccCCCCcCcCcccccCCCCCCEEeccCCcCccCCCcCccCccccchhhhccccccCCCC
Q 042123 166 NQLIGYIPRPFSNLTSVSTLRLSRNDLFGSIPDEIGKMRSLSVLDLNQNQFKGVLPPSISNLTNLKELALLYNHLSGSIP 245 (849)
Q Consensus 166 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p 245 (849)
|+|+++.+..|..+++|++|+|++|+|+ .+|..+..+++|++|+|++|+|+.+.+..|..+++|+.|+|++|++.+..+
T Consensus 98 N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 98 NQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred CcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 8888888888888888888888888888 677778888888888888888887777778888888888888888875543
No 363
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.81 E-value=3.6e-19 Score=179.17 Aligned_cols=135 Identities=27% Similarity=0.347 Sum_probs=103.8
Q ss_pred cccCeEeccCCcccccCCccCCCCCCCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEEc
Q 042123 84 RYMSRLVINDNSLSGFIPPHIGNLKFLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQL 163 (849)
Q Consensus 84 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 163 (849)
++|+.|+|++|.|+++.+..|.++++|++|+|++|+|+++.|.+|.++++|++|+|++|+|+...+..|.++++|+.|+|
T Consensus 32 ~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L 111 (220)
T 2v9t_B 32 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLL 111 (220)
T ss_dssp TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEEC
Confidence 34555555555555556667777778888888888887777777888888888888888887666666778888888888
Q ss_pred CCCcccccCCcCCCCCCCCCEEEccCCCCcCcCcccccCCCCCCEEeccCCcCcc
Q 042123 164 NDNQLIGYIPRPFSNLTSVSTLRLSRNDLFGSIPDEIGKMRSLSVLDLNQNQFKG 218 (849)
Q Consensus 164 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 218 (849)
++|+|.++.+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|.+..
T Consensus 112 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 112 NANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 8888888878888888888888888888887777778888888888888888763
No 364
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.81 E-value=8e-20 Score=210.87 Aligned_cols=187 Identities=24% Similarity=0.313 Sum_probs=161.2
Q ss_pred CCCCCCCCEEeCcCCccccCCCccccCCCCCCEeeCCCCcCcccccccccccCCCCCccccCeEeccCCcccccCCccCC
Q 042123 26 FSSFPHLAYLDLTWNGFFGTIPPQISNLSNLRYLYLGSNQFSGNILAEVSSESSGGNLRYMSRLVINDNSLSGFIPPHIG 105 (849)
Q Consensus 26 ~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 105 (849)
+..+++|++|+|++|.|..+. .|..+++|+.|+|++|+|++..+ +..+++|+.|+|++|.|.+. ..+.
T Consensus 39 ~~~L~~L~~L~l~~n~i~~l~--~l~~l~~L~~L~Ls~N~l~~~~~--------l~~l~~L~~L~Ls~N~l~~l--~~l~ 106 (605)
T 1m9s_A 39 QNELNSIDQIIANNSDIKSVQ--GIQYLPNVTKLFLNGNKLTDIKP--------LTNLKNLGWLFLDENKIKDL--SSLK 106 (605)
T ss_dssp HHHHTTCCCCBCTTCCCCCCT--TGGGCTTCCEEECTTSCCCCCGG--------GGGCTTCCEEECCSSCCCCC--TTST
T ss_pred hhcCCCCCEEECcCCCCCCCh--HHccCCCCCEEEeeCCCCCCChh--------hccCCCCCEEECcCCCCCCC--hhhc
Confidence 567899999999999997654 59999999999999999985321 67899999999999999863 3799
Q ss_pred CCCCCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEEcCCCcccccCCcCCCCCCCCCEE
Q 042123 106 NLKFLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLNDNQLIGYIPRPFSNLTSVSTL 185 (849)
Q Consensus 106 ~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 185 (849)
++++|++|+|++|+|+++ ..|..+++|+.|+|++|.|++. ..|..+++|+.|+|++|+|.++.| |..+++|++|
T Consensus 107 ~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L 180 (605)
T 1m9s_A 107 DLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNL 180 (605)
T ss_dssp TCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEE
T ss_pred cCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEE
Confidence 999999999999999964 4689999999999999999865 679999999999999999998766 9999999999
Q ss_pred EccCCCCcCcCcccccCCCCCCEEeccCCcCccCCCcCccCccccch
Q 042123 186 RLSRNDLFGSIPDEIGKMRSLSVLDLNQNQFKGVLPPSISNLTNLKE 232 (849)
Q Consensus 186 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 232 (849)
+|++|+|++. + .+..+++|+.|+|++|++.......+..+..+..
T Consensus 181 ~Ls~N~i~~l-~-~l~~l~~L~~L~L~~N~l~~~p~~~~~~l~~~~~ 225 (605)
T 1m9s_A 181 YLSKNHISDL-R-ALAGLKNLDVLELFSQECLNKPINHQSNLVVPNT 225 (605)
T ss_dssp ECCSSCCCBC-G-GGTTCTTCSEEECCSEEEECCCCCCCSSCEEECC
T ss_pred ECcCCCCCCC-h-HHccCCCCCEEEccCCcCcCCcccccccEEeccc
Confidence 9999999854 4 5999999999999999998654444444444433
No 365
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.80 E-value=8.7e-20 Score=190.68 Aligned_cols=147 Identities=16% Similarity=0.139 Sum_probs=108.7
Q ss_pred HHHHHhcCCCcCceecCCccceEEEEEecCCcEEEEEEecccCCCCc-----h---------hhHHHHHHHHHH------
Q 042123 582 EIVKATNDFDAKYCIGNGGHASVYRAELPSGEVVAVKKFHSLLPCDQ-----T---------VDQKEFLTEVEA------ 641 (849)
Q Consensus 582 ~~~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~-----~---------~~~~~~~~ei~~------ 641 (849)
.+......|...+.||+|+||.||+|...+|+.||||.++....... . .....+.+|+..
T Consensus 84 ~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~ 163 (282)
T 1zar_A 84 RLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQG 163 (282)
T ss_dssp HHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccC
Confidence 33444456667799999999999999877899999999864321100 0 123345555543
Q ss_pred --hhceeecCCeeEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCC
Q 042123 642 --FYGFCSHARHSFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLE 719 (849)
Q Consensus 642 --~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~ 719 (849)
+.+++. .+..++||||+++|+|.+ +.. .+...++.|++.||+|||+. +|+||||||+||+++ +
T Consensus 164 ~~v~~~~~-~~~~~lvmE~~~g~~L~~-l~~---------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NILl~-~ 228 (282)
T 1zar_A 164 LAVPKVYA-WEGNAVLMELIDAKELYR-VRV---------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVS-E 228 (282)
T ss_dssp SSSCCEEE-EETTEEEEECCCCEEGGG-CCC---------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEE-T
T ss_pred CCcCeEEe-ccceEEEEEecCCCcHHH-cch---------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEEEE-C
Confidence 333333 345689999999999998 422 12457999999999999998 999999999999999 9
Q ss_pred CcEEEeeecCCcccCCCCCCeeeccCCcccccccccc
Q 042123 720 YEAHVADFGIAKSLKPDSSNWTEFAGTCGYIAPELAY 756 (849)
Q Consensus 720 ~~~kl~DfG~a~~~~~~~~~~~~~~g~~~y~aPE~~~ 756 (849)
+.+||+|||+|+.. ..|+|||++.
T Consensus 229 ~~vkl~DFG~a~~~-------------~~~~a~e~l~ 252 (282)
T 1zar_A 229 EGIWIIDFPQSVEV-------------GEEGWREILE 252 (282)
T ss_dssp TEEEECCCTTCEET-------------TSTTHHHHHH
T ss_pred CcEEEEECCCCeEC-------------CCCCHHHHHH
Confidence 99999999998643 3367898864
No 366
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.77 E-value=1.1e-19 Score=188.18 Aligned_cols=169 Identities=18% Similarity=0.263 Sum_probs=95.5
Q ss_pred CCCCCEEeCcCCccccCCCccccCCCCCCEeeCCCCcCcccccccccccCCCCCccccCeEeccCCcccccCCccCCCCC
Q 042123 29 FPHLAYLDLTWNGFFGTIPPQISNLSNLRYLYLGSNQFSGNILAEVSSESSGGNLRYMSRLVINDNSLSGFIPPHIGNLK 108 (849)
Q Consensus 29 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 108 (849)
+.+++.++++.|.++++. .+..+++|++|+|++|+++. + ..+..+++|+.|+|++|.|++..+ +.+++
T Consensus 18 l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~-----l---~~l~~l~~L~~L~L~~N~i~~~~~--l~~l~ 85 (263)
T 1xeu_A 18 LANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQS-----L---AGMQFFTNLKELHLSHNQISDLSP--LKDLT 85 (263)
T ss_dssp HHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCC-----C---TTGGGCTTCCEEECCSSCCCCCGG--GTTCS
T ss_pred HHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCccc-----c---hHHhhCCCCCEEECCCCccCCChh--hccCC
Confidence 445566667777765544 46667777777777776652 1 134455666666666666654433 56666
Q ss_pred CCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEEcCCCcccccCCcCCCCCCCCCEEEcc
Q 042123 109 FLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLNDNQLIGYIPRPFSNLTSVSTLRLS 188 (849)
Q Consensus 109 ~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 188 (849)
+|++|+|++|+++++.+. .. ++|++|+|++|+|++. ..+..+++|+.|+|++|+++++ ..+..+++|++|+|+
T Consensus 86 ~L~~L~L~~N~l~~l~~~--~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~--~~l~~l~~L~~L~L~ 158 (263)
T 1xeu_A 86 KLEELSVNRNRLKNLNGI--PS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI--VMLGFLSKLEVLDLH 158 (263)
T ss_dssp SCCEEECCSSCCSCCTTC--CC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC--GGGGGCTTCCEEECT
T ss_pred CCCEEECCCCccCCcCcc--cc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC--hHHccCCCCCEEECC
Confidence 666666666666643321 12 5566666666666542 2355556666666666665554 245555555566665
Q ss_pred CCCCcCcCcccccCCCCCCEEeccCCcCcc
Q 042123 189 RNDLFGSIPDEIGKMRSLSVLDLNQNQFKG 218 (849)
Q Consensus 189 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 218 (849)
+|++++. ..+..+++|+.|++++|.+..
T Consensus 159 ~N~i~~~--~~l~~l~~L~~L~l~~N~~~~ 186 (263)
T 1xeu_A 159 GNEITNT--GGLTRLKKVNWIDLTGQKCVN 186 (263)
T ss_dssp TSCCCBC--TTSTTCCCCCEEEEEEEEEEC
T ss_pred CCcCcch--HHhccCCCCCEEeCCCCcccC
Confidence 5555533 345555555555555555553
No 367
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.77 E-value=4.1e-21 Score=220.38 Aligned_cols=203 Identities=18% Similarity=0.131 Sum_probs=118.9
Q ss_pred CCCCCCCEEEccCCCCcCcCcccccCCCCCCEEeccCCc-------------CccCCCcCccCccccchhh-hccccccC
Q 042123 177 SNLTSVSTLRLSRNDLFGSIPDEIGKMRSLSVLDLNQNQ-------------FKGVLPPSISNLTNLKELA-LLYNHLSG 242 (849)
Q Consensus 177 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~-------------l~~~~~~~~~~l~~L~~L~-L~~N~l~~ 242 (849)
..+++|+.|+|++|+++ .+|..++.+++|+.|++++|. +.+..|..++.+++|+.|+ ++.|.+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~- 423 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD- 423 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH-
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc-
Confidence 44556666666666665 456666666666666665543 2233344444455555554 4444331
Q ss_pred CCCcchhhhhhhhhhccCcCCCCCCCcccCCCCCcceeeecccccccccCCCCCCcccccEEEccCccccCchhhhhCCC
Q 042123 243 SIPPSLGNLILRQLLLSGNHFTGYLPYNICRGGALEIFTVSENHFQGTIPTSLRNCTSLIRVRLNGNNLTGNISEALGIY 322 (849)
Q Consensus 243 ~~p~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 322 (849)
.|..+.+++|.++...+ ..|+.|+|++|.|+++ |. ++.+
T Consensus 424 ---------------------------------~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~l-p~-~~~l 462 (567)
T 1dce_A 424 ---------------------------------DLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTVL-CH-LEQL 462 (567)
T ss_dssp ---------------------------------HHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSSC-CC-GGGG
T ss_pred ---------------------------------hhhhhhhhcccccccCc------cCceEEEecCCCCCCC-cC-cccc
Confidence 23334444444443222 1356666666666653 33 6666
Q ss_pred CCCCEEeccCccccCcccccCCCCCCCcEEeccCCccccCCCCCccccccccccccccccccccC-chhhcCCCCCcEEE
Q 042123 323 PNLTFIDLSRNNFYGEISSNWGKFPKLGTLNVSMNNITGGLPREIGNSSQLQAFDLSLNHIVGEI-PKELGKLNPLTKLI 401 (849)
Q Consensus 323 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~N~i~~~~-~~~~~~l~~L~~L~ 401 (849)
++|+.|+|++|+++ .+|..|+.+++|+.|+|++|.|++ +| .+.++++|+.|+|++|+|++.. |..|+.+++|+.|+
T Consensus 463 ~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~ 539 (567)
T 1dce_A 463 LLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLN 539 (567)
T ss_dssp TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEE
T ss_pred ccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEE
Confidence 66777777777666 556666677777777777777764 45 6667777777777777777655 77777777777777
Q ss_pred ccCccccccCccc---ccccccccccc
Q 042123 402 LRGNQITGRLPKE---IGSLTKLEYLD 425 (849)
Q Consensus 402 L~~N~l~~~~p~~---~~~l~~L~~L~ 425 (849)
|++|++++.+|.. +..+++|+.||
T Consensus 540 L~~N~l~~~~~~~~~l~~~lp~L~~L~ 566 (567)
T 1dce_A 540 LQGNSLCQEEGIQERLAEMLPSVSSIL 566 (567)
T ss_dssp CTTSGGGGSSSCTTHHHHHCTTCSEEE
T ss_pred ecCCcCCCCccHHHHHHHHCcccCccC
Confidence 7777777544321 23356666665
No 368
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.77 E-value=1.2e-19 Score=187.94 Aligned_cols=171 Identities=20% Similarity=0.259 Sum_probs=146.8
Q ss_pred CCCCCCEeeCCCCcCcccccccccccCCCCCccccCeEeccCCcccccCCccCCCCCCCCEEEccCCcccCCCCCCCcCC
Q 042123 52 NLSNLRYLYLGSNQFSGNILAEVSSESSGGNLRYMSRLVINDNSLSGFIPPHIGNLKFLSQLDLTNNKFSGPIPLSFDNL 131 (849)
Q Consensus 52 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l 131 (849)
++.+++.++|++|.+++. . .+..+++|+.|++++|.|+.. + .+..+++|++|+|++|+|+++.+ |.++
T Consensus 17 ~l~~l~~l~l~~~~i~~~-----~---~~~~l~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l 84 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDL-----V---SQKELSGVQNFNGDNSNIQSL-A-GMQFFTNLKELHLSHNQISDLSP--LKDL 84 (263)
T ss_dssp HHHHHHHHHHTCSCTTSE-----E---CHHHHTTCSEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTC
T ss_pred HHHHHHHHHhcCCCcccc-----c---chhhcCcCcEEECcCCCcccc-h-HHhhCCCCCEEECCCCccCCChh--hccC
Confidence 567788899999998732 1 356789999999999999854 4 78899999999999999997665 9999
Q ss_pred CCCceeeccCcccccccccccCCCCCCCEEEcCCCcccccCCcCCCCCCCCCEEEccCCCCcCcCcccccCCCCCCEEec
Q 042123 132 SNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLNDNQLIGYIPRPFSNLTSVSTLRLSRNDLFGSIPDEIGKMRSLSVLDL 211 (849)
Q Consensus 132 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 211 (849)
++|++|+|++|++++.. . +.. ++|+.|+|++|+++++ ..+..+++|++|+|++|++++. + .+..+++|++|++
T Consensus 85 ~~L~~L~L~~N~l~~l~-~-~~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L 157 (263)
T 1xeu_A 85 TKLEELSVNRNRLKNLN-G-IPS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDL 157 (263)
T ss_dssp SSCCEEECCSSCCSCCT-T-CCC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEEC
T ss_pred CCCCEEECCCCccCCcC-c-ccc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEEC
Confidence 99999999999998643 2 333 8999999999999986 4699999999999999999854 4 6889999999999
Q ss_pred cCCcCccCCCcCccCccccchhhhccccccCC
Q 042123 212 NQNQFKGVLPPSISNLTNLKELALLYNHLSGS 243 (849)
Q Consensus 212 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 243 (849)
++|++++. ..+..+++|+.|++++|++.+.
T Consensus 158 ~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 158 HGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp TTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred CCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 99999976 7799999999999999999744
No 369
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.77 E-value=3.3e-19 Score=191.71 Aligned_cols=118 Identities=11% Similarity=0.155 Sum_probs=72.6
Q ss_pred CCCCCEEEccCCccc--CCCCCCCcCCCCCceeeccCcccccccccccCC--------CCCCCEEEcCCCcccccCCcCC
Q 042123 107 LKFLSQLDLTNNKFS--GPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGK--------LKSLFDLQLNDNQLIGYIPRPF 176 (849)
Q Consensus 107 l~~L~~L~Ls~n~i~--~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~--------l~~L~~L~L~~N~l~~~~~~~~ 176 (849)
+++|++|||++|+|. ...+..+. .++.+.+..|.|. ..+|.+ +++|+.|+|.+ .++.+.+.+|
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~~~~---~~~~~~~~~~~I~---~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF 120 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAGTYP---NGKFYIYMANFVP---AYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAF 120 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSSSSG---GGCCEEECTTEEC---TTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTT
T ss_pred hccCeEEecCcceeEEecCcccccc---ccccccccccccC---HHHhcccccccccccCCCcEEECCc-cccchhHHHh
Confidence 566777777777776 33332222 2455555555433 456666 77777777777 7777777777
Q ss_pred CCCCCCCEEEccCCCCcCcCcccccCCCCCCEEeccCCc----CccCCCcCccCccccc
Q 042123 177 SNLTSVSTLRLSRNDLFGSIPDEIGKMRSLSVLDLNQNQ----FKGVLPPSISNLTNLK 231 (849)
Q Consensus 177 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~----l~~~~~~~~~~l~~L~ 231 (849)
.++++|++|++++|.+....+.+|.++.++..+.+..+. .......+|.++.+|+
T Consensus 121 ~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~ 179 (329)
T 3sb4_A 121 KGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLE 179 (329)
T ss_dssp TTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCE
T ss_pred hcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccc
Confidence 777777777777777766666677776666666665532 1223344455555554
No 370
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.77 E-value=1.5e-19 Score=194.29 Aligned_cols=290 Identities=13% Similarity=0.105 Sum_probs=197.9
Q ss_pred CCCCCEEEccCCcccCCCCCCCcC-CCCCceeeccCcccc--cccccccCCCCCCCEEEcCCCcccccCCcCCCC-----
Q 042123 107 LKFLSQLDLTNNKFSGPIPLSFDN-LSNLIFLYLYGNLLS--GSILSSLGKLKSLFDLQLNDNQLIGYIPRPFSN----- 178 (849)
Q Consensus 107 l~~L~~L~Ls~n~i~~~~~~~~~~-l~~L~~L~L~~N~l~--~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~----- 178 (849)
+.+++.|.++++ +....-..+.. +++|+.|+|++|+|. ......+ +.++.+.+..| .+++.+|.+
T Consensus 24 ~~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~~---~~~~~~~~~~~---~I~~~aF~~~~~~~ 96 (329)
T 3sb4_A 24 ANSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGTY---PNGKFYIYMAN---FVPAYAFSNVVNGV 96 (329)
T ss_dssp HHHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSSS---GGGCCEEECTT---EECTTTTEEEETTE
T ss_pred hCceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCccccc---ccccccccccc---ccCHHHhccccccc
Confidence 456788888764 22111112333 788999999999998 3322222 33566777776 456788999
Q ss_pred ---CCCCCEEEccCCCCcCcCcccccCCCCCCEEeccCCcCccCCCcCccCccccchhhhccccccCCCCcchhhhhhhh
Q 042123 179 ---LTSVSTLRLSRNDLFGSIPDEIGKMRSLSVLDLNQNQFKGVLPPSISNLTNLKELALLYNHLSGSIPPSLGNLILRQ 255 (849)
Q Consensus 179 ---l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~ 255 (849)
+++|+.|+|.+ .++.+.+.+|.++++|+.|++++|.+..+.+.+|.++.++..+.+..+...
T Consensus 97 ~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~-------------- 161 (329)
T 3sb4_A 97 TKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAY-------------- 161 (329)
T ss_dssp EEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHH--------------
T ss_pred ccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhh--------------
Confidence 99999999999 888777889999999999999999998888899999888877766553221
Q ss_pred hhccCcCCCCCCCcccCCCCCcc-eeeecccc-cccccCCCCCCcccccEEEccCccccCchhhhhCCCCCCCEEeccCc
Q 042123 256 LLLSGNHFTGYLPYNICRGGALE-IFTVSENH-FQGTIPTSLRNCTSLIRVRLNGNNLTGNISEALGIYPNLTFIDLSRN 333 (849)
Q Consensus 256 L~L~~n~i~~~~~~~~~~~~~L~-~L~l~~N~-l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N 333 (849)
.....+...+|..+..|+ .+.+.... +.......--...++..+.+.++-...........+++|+.|+|++|
T Consensus 162 -----~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n 236 (329)
T 3sb4_A 162 -----RFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKT 236 (329)
T ss_dssp -----HTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTB
T ss_pred -----hccccccccccccccccceeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCC
Confidence 001112233344444444 33333221 11111111123456666666655322112222223678888888888
Q ss_pred cccCcccccCCCCCCCcEEeccCCccccCCCCCcccccccc-ccccccccccccCchhhcCCCCCcEEEccCccccccCc
Q 042123 334 NFYGEISSNWGKFPKLGTLNVSMNNITGGLPREIGNSSQLQ-AFDLSLNHIVGEIPKELGKLNPLTKLILRGNQITGRLP 412 (849)
Q Consensus 334 ~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~-~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p 412 (849)
+++...+..|..+.+|+.|+|.+| ++.+.+..|.++.+|+ .+++.+ .++.+.+.+|.++++|+.|++++|+++.+.+
T Consensus 237 ~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~ 314 (329)
T 3sb4_A 237 NATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGD 314 (329)
T ss_dssp CCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECT
T ss_pred CcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccch
Confidence 888777788888888888888887 7767778888888888 888888 7776777888889999999988888887777
Q ss_pred ccccccccccccc
Q 042123 413 KEIGSLTKLEYLD 425 (849)
Q Consensus 413 ~~~~~l~~L~~L~ 425 (849)
.+|.++++|+.++
T Consensus 315 ~aF~~~~~L~~ly 327 (329)
T 3sb4_A 315 ELFGNGVPSKLIY 327 (329)
T ss_dssp TTTCTTCCCCEEE
T ss_pred hhhcCCcchhhhc
Confidence 7888888887665
No 371
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.77 E-value=2.1e-19 Score=212.88 Aligned_cols=188 Identities=20% Similarity=0.189 Sum_probs=100.0
Q ss_pred CCCCCEEeCcCCccccCCCccccCCCCCCEeeCCCCcCcccccccccccCCCCCccccCeEeccCCcccccCCccCCCCC
Q 042123 29 FPHLAYLDLTWNGFFGTIPPQISNLSNLRYLYLGSNQFSGNILAEVSSESSGGNLRYMSRLVINDNSLSGFIPPHIGNLK 108 (849)
Q Consensus 29 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 108 (849)
-+.++.|+|.+|.+... ....|+.++|++|.|. .+++..|.+. ..+..|..++
T Consensus 172 ~~~~~~l~L~~n~~~~~------~~~~l~~l~Ls~~~i~--------------------~~~~~~n~~~-~~~~~~~~l~ 224 (727)
T 4b8c_D 172 TPLTPKIELFANGKDEA------NQALLQHKKLSQYSID--------------------EDDDIENRMV-MPKDSKYDDQ 224 (727)
T ss_dssp -----------------------------------------------------------------------------CCC
T ss_pred CCccceEEeeCCCCCcc------hhhHhhcCccCccccc--------------------Ccccccccee-cChhhhccCC
Confidence 36678888888887642 2234566677777664 2344555555 5677788888
Q ss_pred CCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEEcCCCcccccCCcCCCCCCCCCEEEcc
Q 042123 109 FLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLNDNQLIGYIPRPFSNLTSVSTLRLS 188 (849)
Q Consensus 109 ~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 188 (849)
+|+.|+|++|+|. .+|..+.++++|++|+|++|.|+ .+|..|.++++|+.|+|++|+|+. .|..|..+++|++|+|+
T Consensus 225 ~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp~~~~~l~~L~~L~L~ 301 (727)
T 4b8c_D 225 LWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLTS-LPAELGSCFQLKYFYFF 301 (727)
T ss_dssp CCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCSS-CCSSGGGGTTCSEEECC
T ss_pred CCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCCc-cChhhcCCCCCCEEECC
Confidence 8888888888887 45555557788888888888887 667777778888888888888774 36677777778888888
Q ss_pred CCCCcCcCcccccCCCCCCEEeccCCcCccCCCcCccCccc-cchhhhccccccCCCCcc
Q 042123 189 RNDLFGSIPDEIGKMRSLSVLDLNQNQFKGVLPPSISNLTN-LKELALLYNHLSGSIPPS 247 (849)
Q Consensus 189 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~-L~~L~L~~N~l~~~~p~~ 247 (849)
+|.|+ .+|..|..+++|++|+|++|.|++.+|..+..+.. +..|+|++|.+++.+|..
T Consensus 302 ~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~ 360 (727)
T 4b8c_D 302 DNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE 360 (727)
T ss_dssp SSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_pred CCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc
Confidence 87776 56666777777777777777777766666654432 234667777776666653
No 372
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.77 E-value=5e-19 Score=175.02 Aligned_cols=132 Identities=17% Similarity=0.240 Sum_probs=88.6
Q ss_pred CCccccCeEeccCCcccccCCccCCCCCCCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCE
Q 042123 81 GNLRYMSRLVINDNSLSGFIPPHIGNLKFLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFD 160 (849)
Q Consensus 81 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 160 (849)
..+++|+.|++++|.++. +..+.++++|++|++++|++++..+..|..+++|++|+|++|.+++..+..+..+++|++
T Consensus 63 ~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~ 140 (197)
T 4ezg_A 63 EYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNS 140 (197)
T ss_dssp GGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCE
T ss_pred hcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCE
Confidence 334455555555554432 235666777777777777777666677777777777777777777666777777777777
Q ss_pred EEcCCCc-ccccCCcCCCCCCCCCEEEccCCCCcCcCcccccCCCCCCEEeccCCcCcc
Q 042123 161 LQLNDNQ-LIGYIPRPFSNLTSVSTLRLSRNDLFGSIPDEIGKMRSLSVLDLNQNQFKG 218 (849)
Q Consensus 161 L~L~~N~-l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 218 (849)
|+|++|. +..+ + .+..+++|++|++++|++++ ++ .+..+++|++|++++|++.+
T Consensus 141 L~L~~n~~i~~~-~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 141 IDLSYNGAITDI-M-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp EECCSCTBCCCC-G-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC----
T ss_pred EEccCCCCcccc-H-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCcccCC
Confidence 7777776 6554 2 57777888888888888774 33 57777888888888887753
No 373
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.76 E-value=1.8e-20 Score=214.97 Aligned_cols=214 Identities=15% Similarity=0.145 Sum_probs=171.4
Q ss_pred cCCCCCCEEeccCCcCccCCCcCccCccccchhhhccccccCCCCcchhhhhhhhhhccCcCCCCCCCcccCCCCCccee
Q 042123 201 GKMRSLSVLDLNQNQFKGVLPPSISNLTNLKELALLYNHLSGSIPPSLGNLILRQLLLSGNHFTGYLPYNICRGGALEIF 280 (849)
Q Consensus 201 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L 280 (849)
..+++|+.|+|++|+++ .+|..++.+++|++|++++|.....+|. .+. .+.+.+..|..+..+++|+.|
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~-----ll~-----~~~~~~~~~~~l~~l~~L~~L 414 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIIL-----LMR-----ALDPLLYEKETLQYFSTLKAV 414 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHH-----HHH-----HHCTGGGHHHHHHHHHHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHH-----HHH-----hcccccCCHHHHHHHHhcccC
Confidence 56889999999999998 6788999999999999977642111110 111 223344566677777788888
Q ss_pred e-ecccccccccCCCCCCcccccEEEccCccccCchhhhhCCCCCCCEEeccCccccCcccccCCCCCCCcEEeccCCcc
Q 042123 281 T-VSENHFQGTIPTSLRNCTSLIRVRLNGNNLTGNISEALGIYPNLTFIDLSRNNFYGEISSNWGKFPKLGTLNVSMNNI 359 (849)
Q Consensus 281 ~-l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i 359 (849)
+ ++.|.+ .+|..+.+++|.++...+. .|+.|+|++|.+++ +|. |..+++|+.|+|++|.|
T Consensus 415 ~~l~~n~~-----------~~L~~l~l~~n~i~~l~~~------~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l 475 (567)
T 1dce_A 415 DPMRAAYL-----------DDLRSKFLLENSVLKMEYA------DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRL 475 (567)
T ss_dssp CGGGHHHH-----------HHHHHHHHHHHHHHHHHHT------TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCC
T ss_pred cchhhccc-----------chhhhhhhhcccccccCcc------CceEEEecCCCCCC-CcC-ccccccCcEeecCcccc
Confidence 7 666654 3566777888888865442 59999999999996 565 99999999999999999
Q ss_pred ccCCCCCccccccccccccccccccccCchhhcCCCCCcEEEccCccccccC-ccccccccccccccccc--CCCCChh-
Q 042123 360 TGGLPREIGNSSQLQAFDLSLNHIVGEIPKELGKLNPLTKLILRGNQITGRL-PKEIGSLTKLEYLDFSA--IGELPSQ- 435 (849)
Q Consensus 360 ~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~l~~--l~~lp~~- 435 (849)
+ .+|..|+++++|+.|+|++|+|++ +| .|+.+++|+.|+|++|+|++.. |..++.+++|+.|++++ +..+|+.
T Consensus 476 ~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~ 552 (567)
T 1dce_A 476 R-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQ 552 (567)
T ss_dssp C-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCT
T ss_pred c-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHH
Confidence 9 789999999999999999999996 67 8999999999999999999876 99999999999999986 5555553
Q ss_pred ---hhcccccceecc
Q 042123 436 ---ICNMKSLEKLNL 447 (849)
Q Consensus 436 ---~~~l~~L~~L~L 447 (849)
+..+++|+.|++
T Consensus 553 ~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 553 ERLAEMLPSVSSILT 567 (567)
T ss_dssp THHHHHCTTCSEEEC
T ss_pred HHHHHHCcccCccCC
Confidence 345889999875
No 374
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.76 E-value=1.7e-18 Score=171.19 Aligned_cols=153 Identities=17% Similarity=0.242 Sum_probs=131.2
Q ss_pred CCccccCeEeccCCcccccCCccCCCCCCCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCE
Q 042123 81 GNLRYMSRLVINDNSLSGFIPPHIGNLKFLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFD 160 (849)
Q Consensus 81 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 160 (849)
+.+++|+.|++++|.+. .+| .+..+++|++|++++|.++.. ..+..+++|++|++++|++++..+..|.++++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~~--~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATNY--NPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSCC--GGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCcc--hhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 45788888899988888 445 688999999999999988743 47889999999999999999878889999999999
Q ss_pred EEcCCCcccccCCcCCCCCCCCCEEEccCCC-CcCcCcccccCCCCCCEEeccCCcCccCCCcCccCccccchhhhcccc
Q 042123 161 LQLNDNQLIGYIPRPFSNLTSVSTLRLSRND-LFGSIPDEIGKMRSLSVLDLNQNQFKGVLPPSISNLTNLKELALLYNH 239 (849)
Q Consensus 161 L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 239 (849)
|+|++|++++..+..|..+++|++|+|++|+ ++ .+| .+.++++|++|++++|++++. + .+..+++|++|++++|+
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~~-~-~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHDY-R-GIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCCC-T-TGGGCSSCCEEEECBC-
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcCh-H-HhccCCCCCEEEeeCcc
Confidence 9999999998778889999999999999998 66 555 688999999999999999864 3 78899999999999998
Q ss_pred cc
Q 042123 240 LS 241 (849)
Q Consensus 240 l~ 241 (849)
+.
T Consensus 193 i~ 194 (197)
T 4ezg_A 193 IG 194 (197)
T ss_dssp --
T ss_pred cC
Confidence 86
No 375
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.74 E-value=1.3e-17 Score=164.00 Aligned_cols=129 Identities=25% Similarity=0.322 Sum_probs=86.6
Q ss_pred CeEeccCCcccccCCccCCCCCCCCEEEccCCcccCCCCC-CCcCCCCCceeeccCcccccccccccCCCCCCCEEEcCC
Q 042123 87 SRLVINDNSLSGFIPPHIGNLKFLSQLDLTNNKFSGPIPL-SFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLND 165 (849)
Q Consensus 87 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 165 (849)
+.+++++|.++ .+|..+.. +|++|++++|+|+++.+. .|..+++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 56777777775 44544432 677777777777765553 366777777777777777666666677777777777777
Q ss_pred CcccccCCcCCCCCCCCCEEEccCCCCcCcCcccccCCCCCCEEeccCCcCcc
Q 042123 166 NQLIGYIPRPFSNLTSVSTLRLSRNDLFGSIPDEIGKMRSLSVLDLNQNQFKG 218 (849)
Q Consensus 166 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 218 (849)
|+|+++.+..|.++++|++|+|++|+|++..|..|..+++|++|+|++|.+.+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 140 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNC 140 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCC
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccC
Confidence 77776666666667777777777777666666666666666666666666653
No 376
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.74 E-value=9.2e-17 Score=176.16 Aligned_cols=253 Identities=12% Similarity=0.094 Sum_probs=126.6
Q ss_pred cCCCCCccccCeEeccCCcccccCCccCCCCCCCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCC
Q 042123 77 ESSGGNLRYMSRLVINDNSLSGFIPPHIGNLKFLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLK 156 (849)
Q Consensus 77 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 156 (849)
..+|.+. +|+.+.+.+| +..+...+|.+ .+|+.+.+.+ .++.+.+.+|.++++|+.++|++|+++.+...+|. ..
T Consensus 129 ~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~ 203 (401)
T 4fdw_A 129 KDAFRNS-QIAKVVLNEG-LKSIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YA 203 (401)
T ss_dssp TTTTTTC-CCSEEECCTT-CCEECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TC
T ss_pred HhhcccC-CccEEEeCCC-ccEECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ec
Confidence 3344442 4555555444 44444455555 3456665554 45545555566666666666665555554445554 35
Q ss_pred CCCEEEcCCCcccccCCcCCCCCCCCCEEEccCCCCcCcCcccccCCCCCCEEeccCCcCccCCCcCccCccccchhhhc
Q 042123 157 SLFDLQLNDNQLIGYIPRPFSNLTSVSTLRLSRNDLFGSIPDEIGKMRSLSVLDLNQNQFKGVLPPSISNLTNLKELALL 236 (849)
Q Consensus 157 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 236 (849)
+|+.+.|.++ +..+...+|.++++|+.+++..| ++.....+|.+ .+|+.+.+ .+.++.+...+|.++++|+.+++.
T Consensus 204 ~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~ 279 (401)
T 4fdw_A 204 GIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTY 279 (401)
T ss_dssp CCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEE
T ss_pred ccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeC
Confidence 5666666533 55555556666666666666543 34344445555 55666665 333444555556666666655555
Q ss_pred cccccCCCCcchhhhhhhhhhccCcCCCCCCCcccCCCCCcceeeecccccccccCCCCCCcccccEEEccCccccCchh
Q 042123 237 YNHLSGSIPPSLGNLILRQLLLSGNHFTGYLPYNICRGGALEIFTVSENHFQGTIPTSLRNCTSLIRVRLNGNNLTGNIS 316 (849)
Q Consensus 237 ~N~l~~~~p~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 316 (849)
+|.+. .+.+. ...+.+|.++++|+.+.+. +.++.+..
T Consensus 280 ~~~~~------------------~~~~~------------------------~I~~~aF~~c~~L~~l~l~-~~i~~I~~ 316 (401)
T 4fdw_A 280 GSTFN------------------DDPEA------------------------MIHPYCLEGCPKLARFEIP-ESIRILGQ 316 (401)
T ss_dssp SSCCC------------------CCTTC------------------------EECTTTTTTCTTCCEECCC-TTCCEECT
T ss_pred Ccccc------------------CCccc------------------------EECHHHhhCCccCCeEEeC-CceEEEhh
Confidence 55432 01111 1233344444445544444 23444444
Q ss_pred hhhCCCCCCCEEeccCccccCcccccCCCCCCCcEEeccCCccccCCCCCccccc-cccccccccccc
Q 042123 317 EALGIYPNLTFIDLSRNNFYGEISSNWGKFPKLGTLNVSMNNITGGLPREIGNSS-QLQAFDLSLNHI 383 (849)
Q Consensus 317 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~-~L~~L~L~~N~i 383 (849)
.+|..+++|+.++|..| +.......|..+ +|+.+++++|.+....+..|.+++ +++.|++..+.+
T Consensus 317 ~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~ 382 (401)
T 4fdw_A 317 GLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESV 382 (401)
T ss_dssp TTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGH
T ss_pred hhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHH
Confidence 45555555555555333 333444455555 555555555555544444454442 455555555443
No 377
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.74 E-value=1.4e-17 Score=163.58 Aligned_cols=109 Identities=29% Similarity=0.395 Sum_probs=55.4
Q ss_pred ccCeEeccCCcccccCCc-cCCCCCCCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEEc
Q 042123 85 YMSRLVINDNSLSGFIPP-HIGNLKFLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQL 163 (849)
Q Consensus 85 ~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 163 (849)
+++.|++++|.|++..+. .|.++++|++|+|++|+|+++.|.+|.++++|++|+|++|+|++..+..|.++++|++|+|
T Consensus 30 ~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 109 (192)
T 1w8a_A 30 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109 (192)
T ss_dssp TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEEC
Confidence 445555555555444332 2445555555555555555444555555555555555555555444444555555555555
Q ss_pred CCCcccccCCcCCCCCCCCCEEEccCCCCc
Q 042123 164 NDNQLIGYIPRPFSNLTSVSTLRLSRNDLF 193 (849)
Q Consensus 164 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 193 (849)
++|+|+++.|..|..+++|++|+|++|.+.
T Consensus 110 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 139 (192)
T 1w8a_A 110 YDNQISCVMPGSFEHLNSLTSLNLASNPFN 139 (192)
T ss_dssp CSSCCCEECTTSSTTCTTCCEEECTTCCBC
T ss_pred CCCcCCeeCHHHhhcCCCCCEEEeCCCCcc
Confidence 555555554555555555555555555544
No 378
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.74 E-value=1.1e-16 Score=175.42 Aligned_cols=195 Identities=13% Similarity=0.097 Sum_probs=164.1
Q ss_pred CCCCCCCCEEeCcCCccccCCCccccCCCCCCEeeCCCCcCcccccccccccCCCCCccccCeEeccCCcccccCCccCC
Q 042123 26 FSSFPHLAYLDLTWNGFFGTIPPQISNLSNLRYLYLGSNQFSGNILAEVSSESSGGNLRYMSRLVINDNSLSGFIPPHIG 105 (849)
Q Consensus 26 ~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 105 (849)
+.....++.+.+. |.++.+...+|.+. +|+.+.|.+| ++ .+...+|.+. +|+.+.+.+ .+..+.+.+|.
T Consensus 109 ~~~~~~l~~i~ip-~~i~~I~~~aF~~~-~L~~i~l~~~-i~------~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~ 177 (401)
T 4fdw_A 109 TEILKGYNEIILP-NSVKSIPKDAFRNS-QIAKVVLNEG-LK------SIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFY 177 (401)
T ss_dssp EEECSSCSEEECC-TTCCEECTTTTTTC-CCSEEECCTT-CC------EECTTTTTTC-CCCEEECCT-TCCEECSSTTT
T ss_pred EEecCCccEEEEC-CccCEehHhhcccC-CccEEEeCCC-cc------EECHHhcCCC-CceEEEeCC-CccEehHHHhh
Confidence 3445788999988 56788999999986 7999999887 54 2456677774 799999986 77778889999
Q ss_pred CCCCCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEEcCCCcccccCCcCCCCCCCCCEE
Q 042123 106 NLKFLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLNDNQLIGYIPRPFSNLTSVSTL 185 (849)
Q Consensus 106 ~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 185 (849)
++++|+.++|++|+++.+...+|. ..+|+.+.|..+ ++.+...+|.++++|+.++|.+| ++.+...+|.+ .+|+.+
T Consensus 178 ~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i 253 (401)
T 4fdw_A 178 YCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTV 253 (401)
T ss_dssp TCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEE
T ss_pred CcccCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEE
Confidence 999999999999999988888898 589999999855 77788899999999999999985 78889999999 899999
Q ss_pred EccCCCCcCcCcccccCCCCCCEEeccCCcCc-----cCCCcCccCccccchhhhc
Q 042123 186 RLSRNDLFGSIPDEIGKMRSLSVLDLNQNQFK-----GVLPPSISNLTNLKELALL 236 (849)
Q Consensus 186 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-----~~~~~~~~~l~~L~~L~L~ 236 (849)
.|. +.++.....+|.++++|+.+++.+|.+. .+.+.+|.++++|+.+.|.
T Consensus 254 ~lp-~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~ 308 (401)
T 4fdw_A 254 KLP-NGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP 308 (401)
T ss_dssp EEE-TTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC
T ss_pred EeC-CCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC
Confidence 994 5577677889999999999999998875 4566778888888777765
No 379
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.73 E-value=2.4e-18 Score=203.81 Aligned_cols=230 Identities=22% Similarity=0.155 Sum_probs=124.9
Q ss_pred CCCCEeeCCCCcCcccccccccccCCCCCccccCeEeccCCcccccCCccCCCCCCCCEEEccCCcccCCCCCCCcCCCC
Q 042123 54 SNLRYLYLGSNQFSGNILAEVSSESSGGNLRYMSRLVINDNSLSGFIPPHIGNLKFLSQLDLTNNKFSGPIPLSFDNLSN 133 (849)
Q Consensus 54 ~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~ 133 (849)
+.++.|+|++|.+... ....|+.++|++|.|. .++++.|++. +.+..|..+++
T Consensus 173 ~~~~~l~L~~n~~~~~------------~~~~l~~l~Ls~~~i~--------------~~~~~~n~~~-~~~~~~~~l~~ 225 (727)
T 4b8c_D 173 PLTPKIELFANGKDEA------------NQALLQHKKLSQYSID--------------EDDDIENRMV-MPKDSKYDDQL 225 (727)
T ss_dssp ----------------------------------------------------------------------------CCCC
T ss_pred CccceEEeeCCCCCcc------------hhhHhhcCccCccccc--------------Ccccccccee-cChhhhccCCC
Confidence 4566677776666421 1223445555555543 3456667777 77889999999
Q ss_pred CceeeccCcccccccccccCCCCCCCEEEcCCCcccccCCcCCCCCCCCCEEEccCCCCcCcCcccccCCCCCCEEeccC
Q 042123 134 LIFLYLYGNLLSGSILSSLGKLKSLFDLQLNDNQLIGYIPRPFSNLTSVSTLRLSRNDLFGSIPDEIGKMRSLSVLDLNQ 213 (849)
Q Consensus 134 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 213 (849)
|+.|+|++|.+. .++..+.++++|++|+|++|.|+. .|..|..+++|++|+|++|+|+ .+|..|.++++|++|+|++
T Consensus 226 L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~~-lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~ 302 (727)
T 4b8c_D 226 WHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLTE-LPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFD 302 (727)
T ss_dssp CCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCSC-CCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCS
T ss_pred CcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCcc-cChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCC
Confidence 999999999998 566667799999999999999995 6788999999999999999999 7799999999999999999
Q ss_pred CcCccCCCcCccCccccchhhhccccccCCCCcchhhhh--hhhhhccCcCCCCCCCcccCCCCCcceeeeccccccccc
Q 042123 214 NQFKGVLPPSISNLTNLKELALLYNHLSGSIPPSLGNLI--LRQLLLSGNHFTGYLPYNICRGGALEIFTVSENHFQGTI 291 (849)
Q Consensus 214 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~--L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~ 291 (849)
|.|+ .+|..|+.+++|++|+|++|.+++.+|..+.... ...++|++|.+++.+|.. |..|+++.|...
T Consensus 303 N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~------l~~l~l~~n~~~--- 372 (727)
T 4b8c_D 303 NMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE------RRFIEINTDGEP--- 372 (727)
T ss_dssp SCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC---------------------
T ss_pred CCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc------cceeEeeccccc---
Confidence 9998 6688899999999999999999988888887654 445789999998877753 455566655111
Q ss_pred CCCCCCcccccEEEccCccccCchhhhhCCCCCCCEEeccCcccc
Q 042123 292 PTSLRNCTSLIRVRLNGNNLTGNISEALGIYPNLTFIDLSRNNFY 336 (849)
Q Consensus 292 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 336 (849)
-..++ .+++..+..+..+..+....+++|.+.
T Consensus 373 ~~~~~-------------~l~~~~~~~~~~l~~~~~~~ls~Nil~ 404 (727)
T 4b8c_D 373 QREYD-------------SLQQSTEHLATDLAKRTFTVLSYNTLC 404 (727)
T ss_dssp ------------------------------------------CCC
T ss_pred ccccC-------------Cccccccchhhcccccceeeeeccccc
Confidence 01111 223333344455556667777777765
No 380
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.72 E-value=2.6e-16 Score=173.45 Aligned_cols=327 Identities=12% Similarity=0.045 Sum_probs=164.0
Q ss_pred CCCCCccccCeEeccCCcccccCCccCCCCCCCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCC
Q 042123 78 SSGGNLRYMSRLVINDNSLSGFIPPHIGNLKFLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKS 157 (849)
Q Consensus 78 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 157 (849)
.+|.++++|+.+.|..+ ++.+...+|.++++|+.++|.++ ++.+...+|.++.+|+.+.+..+ +..+...+|.+...
T Consensus 65 ~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~~~ 141 (394)
T 4fs7_A 65 AAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGCDF 141 (394)
T ss_dssp TTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTCCC
T ss_pred HHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeeecccc
Confidence 34444444444444322 33344455555555666655533 44455555666666665555443 33344455555543
Q ss_pred CCEEEcCCCcccccCCcCCCCCCCCCEEEccCCCCcCcCcccccCCCCCCEEeccCCcCccCCCcCccCccccchhhhcc
Q 042123 158 LFDLQLNDNQLIGYIPRPFSNLTSVSTLRLSRNDLFGSIPDEIGKMRSLSVLDLNQNQFKGVLPPSISNLTNLKELALLY 237 (849)
Q Consensus 158 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 237 (849)
++...... +..+...+|.++++|+.+.+.++. ......+|.++.+|+.+.+..| ++.+...+|.++..|+.+.+..
T Consensus 142 ~~~~~~~~--~~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~ 217 (394)
T 4fs7_A 142 KEITIPEG--VTVIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPN 217 (394)
T ss_dssp SEEECCTT--CCEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCT
T ss_pred cccccCcc--ccccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCC
Confidence 33332222 233445566666666666665443 2244455666666666666555 4445555666666666665554
Q ss_pred ccccCCCCcchhhhhhhhhhccCcCCCCCCCcccCCCCCcceeeecccccccccCCCCCCcccccEEEccCccccCchhh
Q 042123 238 NHLSGSIPPSLGNLILRQLLLSGNHFTGYLPYNICRGGALEIFTVSENHFQGTIPTSLRNCTSLIRVRLNGNNLTGNISE 317 (849)
Q Consensus 238 N~l~~~~p~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 317 (849)
+... .....+....|+.+.+.. .++.+....|.....|+.+.+..+... .....|.++..++.+.+..+.+ ...
T Consensus 218 ~~~~-i~~~~~~~~~l~~i~ip~-~~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i---~~~ 291 (394)
T 4fs7_A 218 SLYY-LGDFALSKTGVKNIIIPD-SFTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIV---PEK 291 (394)
T ss_dssp TCCE-ECTTTTTTCCCCEEEECT-TCCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEE---CTT
T ss_pred CceE-eehhhcccCCCceEEECC-CceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceee---ccc
Confidence 4332 111111111233333321 122233445555566666666555333 4455566666666665554433 234
Q ss_pred hhCCCCCCCEEeccCccccCcccccCCCCCCCcEEeccCCccccCCCCCccccccccccccccccccccCchhhcCCCCC
Q 042123 318 ALGIYPNLTFIDLSRNNFYGEISSNWGKFPKLGTLNVSMNNITGGLPREIGNSSQLQAFDLSLNHIVGEIPKELGKLNPL 397 (849)
Q Consensus 318 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L 397 (849)
.|....+|+.+.+..+ +.......|..+.+|+.+++.++ ++.+....|.++++|+.+++..| ++.+...+|.++++|
T Consensus 292 ~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L 368 (394)
T 4fs7_A 292 TFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINL 368 (394)
T ss_dssp TTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTC
T ss_pred cccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCC
Confidence 5555666666666543 44344555666666666666533 44444555666666666666554 444445566666666
Q ss_pred cEEEccCccccccCccccccccccc
Q 042123 398 TKLILRGNQITGRLPKEIGSLTKLE 422 (849)
Q Consensus 398 ~~L~L~~N~l~~~~p~~~~~l~~L~ 422 (849)
+.+++..+ ++ .+..+|.++++|+
T Consensus 369 ~~i~lp~~-~~-~~~~~F~~c~~L~ 391 (394)
T 4fs7_A 369 KKVELPKR-LE-QYRYDFEDTTKFK 391 (394)
T ss_dssp CEEEEEGG-GG-GGGGGBCTTCEEE
T ss_pred CEEEECCC-CE-EhhheecCCCCCc
Confidence 66666543 22 2233444444444
No 381
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.70 E-value=8.4e-16 Score=169.43 Aligned_cols=333 Identities=11% Similarity=0.064 Sum_probs=220.8
Q ss_pred eeCCccCCCCCCCCEEeCcCCccccCCCccccCCCCCCEeeCCCCcCcccccccccccCCCCCccccCeEeccCCccccc
Q 042123 20 TLHDFSFSSFPHLAYLDLTWNGFFGTIPPQISNLSNLRYLYLGSNQFSGNILAEVSSESSGGNLRYMSRLVINDNSLSGF 99 (849)
Q Consensus 20 ~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~ 99 (849)
++++.+|.+..+|+.++|. +.++.+...+|.++++|+.++|.++ ++ .+...+|.++.+|+.+.+..+ +..+
T Consensus 61 sIg~~AF~~c~~L~~i~lp-~~i~~I~~~aF~~c~~L~~i~lp~~-l~------~I~~~aF~~c~~L~~i~~p~~-l~~i 131 (394)
T 4fs7_A 61 SIGYAAFQGCRKVTEIKIP-STVREIGEFAFENCSKLEIINIPDS-VK------MIGRCTFSGCYALKSILLPLM-LKSI 131 (394)
T ss_dssp EECTTTTTTCTTEEEEECC-TTCCEECTTTTTTCTTCCEECCCTT-CC------EECTTTTTTCTTCCCCCCCTT-CCEE
T ss_pred EhHHHHhhCCCCceEEEeC-CCccCcchhHhhCCCCCcEEEeCCC-ce------EccchhhcccccchhhcccCc-eeee
Confidence 3556677777777777776 3466677777777777777777654 32 244566777777777666544 3435
Q ss_pred CCccCCCCCCCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEEcCCCcccccCCcCCCCC
Q 042123 100 IPPHIGNLKFLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLNDNQLIGYIPRPFSNL 179 (849)
Q Consensus 100 ~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 179 (849)
...+|.+...+... +. +.+..+...+|.++++|+.+.+.++. ..+...+|.++.+|+.+.+..| +..+...+|.++
T Consensus 132 ~~~aF~~~~~~~~~-~~-~~~~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~ 207 (394)
T 4fs7_A 132 GVEAFKGCDFKEIT-IP-EGVTVIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAEC 207 (394)
T ss_dssp CTTTTTTCCCSEEE-CC-TTCCEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTC
T ss_pred cceeeecccccccc-cC-ccccccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccc
Confidence 55666665433322 22 22233455677777777777776553 3355666777777777777665 566666777777
Q ss_pred CCCCEEEccCCCCcCcCcccccCCCCCCEEeccCCcCccCCCcCccCccccchhhhccccccCCCCcchhhhhhhhhhcc
Q 042123 180 TSVSTLRLSRNDLFGSIPDEIGKMRSLSVLDLNQNQFKGVLPPSISNLTNLKELALLYNHLSGSIPPSLGNLILRQLLLS 259 (849)
Q Consensus 180 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~L~ 259 (849)
..|+.+.+..+... +.+.+....+|+.+.+..+. +.+...+|.++.+|+.+.+..+...
T Consensus 208 ~~L~~i~~~~~~~~--i~~~~~~~~~l~~i~ip~~~-~~i~~~~f~~~~~l~~~~~~~~~~~------------------ 266 (394)
T 4fs7_A 208 ILLENMEFPNSLYY--LGDFALSKTGVKNIIIPDSF-TELGKSVFYGCTDLESISIQNNKLR------------------ 266 (394)
T ss_dssp TTCCBCCCCTTCCE--ECTTTTTTCCCCEEEECTTC-CEECSSTTTTCSSCCEEEECCTTCE------------------
T ss_pred cccceeecCCCceE--eehhhcccCCCceEEECCCc-eecccccccccccceeEEcCCCcce------------------
Confidence 77777777665432 22333345667777665433 3344556666666666666554332
Q ss_pred CcCCCCCCCcccCCCCCcceeeecccccccccCCCCCCcccccEEEccCccccCchhhhhCCCCCCCEEeccCccccCcc
Q 042123 260 GNHFTGYLPYNICRGGALEIFTVSENHFQGTIPTSLRNCTSLIRVRLNGNNLTGNISEALGIYPNLTFIDLSRNNFYGEI 339 (849)
Q Consensus 260 ~n~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 339 (849)
+....|.....++.+....+.+ ....|.++.+|+.+.+.++ ++.+...+|....+|+.++|..+ ++...
T Consensus 267 ------i~~~~F~~~~~l~~~~~~~~~i---~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~ 335 (394)
T 4fs7_A 267 ------IGGSLFYNCSGLKKVIYGSVIV---PEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIG 335 (394)
T ss_dssp ------ECSCTTTTCTTCCEEEECSSEE---CTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEEC
T ss_pred ------eeccccccccccceeccCceee---ccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEh
Confidence 3344566666777777766543 2356788888988888654 66677788888899999999754 66666
Q ss_pred cccCCCCCCCcEEeccCCccccCCCCCccccccccccccccccccccCchhhcCCCCCcEE
Q 042123 340 SSNWGKFPKLGTLNVSMNNITGGLPREIGNSSQLQAFDLSLNHIVGEIPKELGKLNPLTKL 400 (849)
Q Consensus 340 ~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L 400 (849)
..+|.++.+|+.+++..| ++.+....|.++.+|+.+++..+ +. .+..+|.++++|+.+
T Consensus 336 ~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 336 KRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LE-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp TTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GG-GGGGGBCTTCEEEEE
T ss_pred HHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CE-EhhheecCCCCCcEE
Confidence 788889999999999877 66677788999999999999765 33 345678888888764
No 382
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.68 E-value=7.6e-17 Score=154.84 Aligned_cols=131 Identities=21% Similarity=0.204 Sum_probs=61.8
Q ss_pred ccCeEeccCCccc-ccCCccCCCCCCCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEEc
Q 042123 85 YMSRLVINDNSLS-GFIPPHIGNLKFLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQL 163 (849)
Q Consensus 85 ~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 163 (849)
+|+.|++++|.++ +.+|..+..+++|++|++++|+|+++ ..|..+++|++|+|++|++++..|..+.++++|+.|+|
T Consensus 25 ~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 102 (168)
T 2ell_A 25 AVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNL 102 (168)
T ss_dssp SCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEEC
T ss_pred cCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEec
Confidence 3444444444443 23344444455555555555555533 44455555555555555554434444444555555555
Q ss_pred CCCcccccCC-cCCCCCCCCCEEEccCCCCcCcCc---ccccCCCCCCEEeccCCcCc
Q 042123 164 NDNQLIGYIP-RPFSNLTSVSTLRLSRNDLFGSIP---DEIGKMRSLSVLDLNQNQFK 217 (849)
Q Consensus 164 ~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~---~~~~~l~~L~~L~L~~N~l~ 217 (849)
++|+++++.+ ..|..+++|++|++++|++++..+ ..+..+++|++|++++|.+.
T Consensus 103 s~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 103 SGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp BSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred cCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 5555544321 344445555555555555543322 24444555555555555444
No 383
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.67 E-value=4e-16 Score=153.11 Aligned_cols=126 Identities=25% Similarity=0.357 Sum_probs=72.2
Q ss_pred eEeccCCcccccCCccCCCCCCCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEEcCCCc
Q 042123 88 RLVINDNSLSGFIPPHIGNLKFLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLNDNQ 167 (849)
Q Consensus 88 ~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 167 (849)
.+++++|.++ .+|..+. ++|++|+|++|+|+ .+|..|.++++|++|+|++|.|++..+..|.++++|++|+|++|+
T Consensus 14 ~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 3444444444 2333332 35666666666665 344556666666666666666665555556666666666666666
Q ss_pred ccccCCcCCCCCCCCCEEEccCCCCcCcCcccccCCCCCCEEeccCCcCc
Q 042123 168 LIGYIPRPFSNLTSVSTLRLSRNDLFGSIPDEIGKMRSLSVLDLNQNQFK 217 (849)
Q Consensus 168 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 217 (849)
|+++.+.+|..+++|++|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 66665556666666666666666665444445555666666666666654
No 384
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.67 E-value=3.2e-16 Score=153.89 Aligned_cols=130 Identities=27% Similarity=0.341 Sum_probs=118.7
Q ss_pred CEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEEcCCCcccccCCcCCCCCCCCCEEEccCC
Q 042123 111 SQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLNDNQLIGYIPRPFSNLTSVSTLRLSRN 190 (849)
Q Consensus 111 ~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 190 (849)
+.+++++|+++. +|..+. ++|++|+|++|.|+ .+|..|.++++|+.|+|++|+|+++.+.+|.++++|++|+|++|
T Consensus 13 ~~l~~~~~~l~~-ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLKV-LPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCSS-CCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCCc-CCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 689999999995 454443 68999999999998 56789999999999999999999999999999999999999999
Q ss_pred CCcCcCcccccCCCCCCEEeccCCcCccCCCcCccCccccchhhhccccccCCC
Q 042123 191 DLFGSIPDEIGKMRSLSVLDLNQNQFKGVLPPSISNLTNLKELALLYNHLSGSI 244 (849)
Q Consensus 191 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 244 (849)
+|++..+..|.++++|++|+|++|+|+.+.+..|..+++|+.|+|++|++.+..
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c 142 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDC 142 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCC
Confidence 999888889999999999999999999887778999999999999999997543
No 385
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.67 E-value=1.1e-16 Score=153.70 Aligned_cols=137 Identities=26% Similarity=0.244 Sum_probs=121.4
Q ss_pred CCCCCEEEccCCccc-CCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEEcCCCcccccCCcCCCCCCCCCEE
Q 042123 107 LKFLSQLDLTNNKFS-GPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLNDNQLIGYIPRPFSNLTSVSTL 185 (849)
Q Consensus 107 l~~L~~L~Ls~n~i~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 185 (849)
.++|++|++++|+++ +.+|..|..+++|++|++++|.+++. ..|..+++|++|+|++|++.+..|..+..+++|++|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 478999999999998 56788899999999999999999865 789999999999999999999888888889999999
Q ss_pred EccCCCCcCcC-cccccCCCCCCEEeccCCcCccCCC---cCccCccccchhhhccccccCCCCc
Q 042123 186 RLSRNDLFGSI-PDEIGKMRSLSVLDLNQNQFKGVLP---PSISNLTNLKELALLYNHLSGSIPP 246 (849)
Q Consensus 186 ~Ls~N~l~~~~-~~~~~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~L~~N~l~~~~p~ 246 (849)
+|++|++++.. +..+..+++|++|++++|.+++..+ ..+..+++|++|++++|.+. .+|.
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~-~~~~ 164 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ-EAPD 164 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC-BCCS
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh-hccc
Confidence 99999998542 2789999999999999999996655 47999999999999999987 4444
No 386
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.65 E-value=1.9e-16 Score=148.68 Aligned_cols=128 Identities=20% Similarity=0.206 Sum_probs=77.9
Q ss_pred ccccCeEeccCCccc-ccCCccCCCCCCCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEE
Q 042123 83 LRYMSRLVINDNSLS-GFIPPHIGNLKFLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDL 161 (849)
Q Consensus 83 l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 161 (849)
.++|+.|++++|.++ +.+|..+..+++|++|++++|+++++ ..|..+++|++|+|++|.+++..|..+.++++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 355666666666665 45566666667777777777776654 556666666666666666665455555556666666
Q ss_pred EcCCCcccccC-CcCCCCCCCCCEEEccCCCCcCcCc---ccccCCCCCCEEecc
Q 042123 162 QLNDNQLIGYI-PRPFSNLTSVSTLRLSRNDLFGSIP---DEIGKMRSLSVLDLN 212 (849)
Q Consensus 162 ~L~~N~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~~---~~~~~l~~L~~L~L~ 212 (849)
++++|+++++. +..+..+++|++|++++|++++..+ ..+..+++|+.|+++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 66666666542 2455666666666666666654433 345556666666554
No 387
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.64 E-value=1.9e-15 Score=146.42 Aligned_cols=129 Identities=26% Similarity=0.296 Sum_probs=79.5
Q ss_pred CeEeccCCcccccCCccCCCCCCCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEEcCCC
Q 042123 87 SRLVINDNSLSGFIPPHIGNLKFLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLNDN 166 (849)
Q Consensus 87 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 166 (849)
+.+++++|.++. +|..+. ++|++|++++|+++++.+..|.++++|++|+|++|++++..+..|.++++|++|+|++|
T Consensus 10 ~~l~~~~~~l~~-~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 10 TEIRCNSKGLTS-VPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp TEEECCSSCCSS-CCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCCcc-CCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 344445555442 232222 46666667666666655556666666666666666666555555666666666666666
Q ss_pred cccccCCcCCCCCCCCCEEEccCCCCcCcCcccccCCCCCCEEeccCCcCcc
Q 042123 167 QLIGYIPRPFSNLTSVSTLRLSRNDLFGSIPDEIGKMRSLSVLDLNQNQFKG 218 (849)
Q Consensus 167 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 218 (849)
+++++.+..|..+++|++|+|++|++++..+..|..+++|++|++++|.+.+
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 138 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 138 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeec
Confidence 6666666666666666666666666665444455666666666666666653
No 388
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.64 E-value=9.6e-16 Score=148.49 Aligned_cols=134 Identities=26% Similarity=0.263 Sum_probs=120.0
Q ss_pred CCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEEcCCCcccccCCcCCCCCCCCCEEEcc
Q 042123 109 FLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLNDNQLIGYIPRPFSNLTSVSTLRLS 188 (849)
Q Consensus 109 ~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 188 (849)
..+.+++++|+++.+ |..+ .++|++|++++|++++..+..|.++++|++|+|++|+++++.+..|..+++|++|+|+
T Consensus 8 ~~~~l~~~~~~l~~~-p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 84 (177)
T 2o6r_A 8 SGTEIRCNSKGLTSV-PTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLH 84 (177)
T ss_dssp ETTEEECCSSCCSSC-CTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEecCCCCccC-CCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECC
Confidence 357899999999965 4433 3689999999999998777889999999999999999999998899999999999999
Q ss_pred CCCCcCcCcccccCCCCCCEEeccCCcCccCCCcCccCccccchhhhccccccCCCC
Q 042123 189 RNDLFGSIPDEIGKMRSLSVLDLNQNQFKGVLPPSISNLTNLKELALLYNHLSGSIP 245 (849)
Q Consensus 189 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p 245 (849)
+|++++..+..|..+++|++|++++|+++++.+..|..+++|++|+|++|++.+..|
T Consensus 85 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 85 ENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 999998777788999999999999999998777778999999999999999986554
No 389
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.63 E-value=2.1e-16 Score=148.45 Aligned_cols=129 Identities=23% Similarity=0.230 Sum_probs=111.8
Q ss_pred CCCCCEEEccCCccc-CCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEEcCCCcccccCCcCCCCCCCCCEE
Q 042123 107 LKFLSQLDLTNNKFS-GPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLNDNQLIGYIPRPFSNLTSVSTL 185 (849)
Q Consensus 107 l~~L~~L~Ls~n~i~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 185 (849)
.++|++|++++|+++ +..|..+..+++|++|++++|.+++. ..+.++++|+.|+|++|++++..|..+..+++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 378999999999998 67788889999999999999999865 778999999999999999998777788889999999
Q ss_pred EccCCCCcCc-CcccccCCCCCCEEeccCCcCccCCC---cCccCccccchhhhcc
Q 042123 186 RLSRNDLFGS-IPDEIGKMRSLSVLDLNQNQFKGVLP---PSISNLTNLKELALLY 237 (849)
Q Consensus 186 ~Ls~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~L~~ 237 (849)
++++|++++. .+..+..+++|++|++++|.+++..+ ..+..+++|++|++++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 9999999853 34788999999999999999987655 4788899999998863
No 390
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.63 E-value=5.6e-16 Score=159.81 Aligned_cols=133 Identities=20% Similarity=0.144 Sum_probs=93.9
Q ss_pred CCcCceecCCccceEEEEEe-cCCcE--EEEEEecccCCCC--------------------chhhHHHHHHHHHHhhcee
Q 042123 590 FDAKYCIGNGGHASVYRAEL-PSGEV--VAVKKFHSLLPCD--------------------QTVDQKEFLTEVEAFYGFC 646 (849)
Q Consensus 590 f~~~~~lG~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~~--------------------~~~~~~~~~~ei~~~~~~~ 646 (849)
|+..+.||+|+||.||+|.. .+|+. ||||.++...... .......+.+|+..+....
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 56778999999999999977 68999 9999875431110 0011123444543221110
Q ss_pred ---------ecCCeeEEEEEeccC-C----ChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHH-hcCCCCeEecCCCC
Q 042123 647 ---------SHARHSFLLYEFLER-G----SLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLH-HDCFPPIVHRDISS 711 (849)
Q Consensus 647 ---------~~~~~~~lV~e~~~~-g----sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH-~~~~~~ivH~dlk~ 711 (849)
......++||||+.+ | +|.++... .++.++..++.|++.|+.||| +. +|+||||||
T Consensus 129 ~~~i~~p~~~~~~~~~lVmE~~g~~g~~~~~L~~~~~~------~~~~~~~~i~~qi~~~l~~lH~~~---givHrDlkp 199 (258)
T 1zth_A 129 EAGVSVPQPYTYMKNVLLMEFIGEDELPAPTLVELGRE------LKELDVEGIFNDVVENVKRLYQEA---ELVHADLSE 199 (258)
T ss_dssp HTTCCCCCEEEEETTEEEEECCEETTEECCBHHHHGGG------GGGSCHHHHHHHHHHHHHHHHHTS---CEECSSCST
T ss_pred hCCCCCCeEEEcCCCEEEEEecCCCCCccccHHHHhhc------cChHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCH
Confidence 011345799999953 4 66665422 234567899999999999999 87 999999999
Q ss_pred CCeeecCCCcEEEeeecCCccc
Q 042123 712 KNLLLDLEYEAHVADFGIAKSL 733 (849)
Q Consensus 712 ~Nill~~~~~~kl~DfG~a~~~ 733 (849)
+|||++. .++|+|||+|...
T Consensus 200 ~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 200 YNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp TSEEESS--SEEECCCTTCEET
T ss_pred HHEEEcC--cEEEEECcccccC
Confidence 9999988 9999999999765
No 391
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.59 E-value=1.1e-15 Score=147.77 Aligned_cols=133 Identities=18% Similarity=0.164 Sum_probs=96.2
Q ss_pred cCCCCCCCCEEEccCCcccCCCCCCCcCCC-CCceeeccCcccccccccccCCCCCCCEEEcCCCcccccCCcCCCCCCC
Q 042123 103 HIGNLKFLSQLDLTNNKFSGPIPLSFDNLS-NLIFLYLYGNLLSGSILSSLGKLKSLFDLQLNDNQLIGYIPRPFSNLTS 181 (849)
Q Consensus 103 ~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 181 (849)
.+.++.+|++|++++|+++.+ |. +..+. +|++|+|++|.|++. ..|.++++|+.|+|++|+|+++++..|..+++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~i-~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPVI-EN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EEECTTSCEEEECTTSCCCSC-CC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred hcCCcCCceEEEeeCCCCchh-HH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 345567777777777777744 43 44443 777777777777754 56777788888888888887776666677888
Q ss_pred CCEEEccCCCCcCcCcc--cccCCCCCCEEeccCCcCccCCCc----CccCccccchhhhcccccc
Q 042123 182 VSTLRLSRNDLFGSIPD--EIGKMRSLSVLDLNQNQFKGVLPP----SISNLTNLKELALLYNHLS 241 (849)
Q Consensus 182 L~~L~Ls~N~l~~~~~~--~~~~l~~L~~L~L~~N~l~~~~~~----~~~~l~~L~~L~L~~N~l~ 241 (849)
|++|+|++|+|+ .+|. .+..+++|+.|++++|.+.. .|. .+..+++|+.|+++.|.+.
T Consensus 90 L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 90 LTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCccceeCCCcCCHH
Confidence 888888888886 4454 67778888888888888874 344 3777888888888888764
No 392
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.56 E-value=1.9e-15 Score=146.11 Aligned_cols=106 Identities=24% Similarity=0.270 Sum_probs=65.1
Q ss_pred CCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEEcCCCcccccCC-cCCCCCCCCCEEEc
Q 042123 109 FLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLNDNQLIGYIP-RPFSNLTSVSTLRL 187 (849)
Q Consensus 109 ~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L 187 (849)
+|++|+|++|+|+++ ..|..+++|++|+|++|.|++..+..|.++++|+.|+|++|+|..+.+ ..+..+++|++|++
T Consensus 43 ~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~l 120 (176)
T 1a9n_A 43 QFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCI 120 (176)
T ss_dssp CCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCCCGGGGGGGGGCTTCCEEEC
T ss_pred CCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCCcchhhHhhhcCCCCCEEEe
Confidence 566666666666543 455666666666666666664444444666666666666666655432 25666677777777
Q ss_pred cCCCCcCcCcc----cccCCCCCCEEeccCCcCc
Q 042123 188 SRNDLFGSIPD----EIGKMRSLSVLDLNQNQFK 217 (849)
Q Consensus 188 s~N~l~~~~~~----~~~~l~~L~~L~L~~N~l~ 217 (849)
++|++. ..|. .+..+++|+.||+++|.+.
T Consensus 121 ~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 121 LRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred cCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 777766 3444 3667777777777777665
No 393
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.56 E-value=4.6e-15 Score=158.35 Aligned_cols=134 Identities=11% Similarity=0.132 Sum_probs=94.6
Q ss_pred CCCcCceecCCccceEEEEEecCCcEEEEEEecccCCC------C----chhhHHH--------H---HHHHHHhhceee
Q 042123 589 DFDAKYCIGNGGHASVYRAELPSGEVVAVKKFHSLLPC------D----QTVDQKE--------F---LTEVEAFYGFCS 647 (849)
Q Consensus 589 ~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~------~----~~~~~~~--------~---~~ei~~~~~~~~ 647 (849)
-|++...||+|++|.||+|...+|+.||||.++..... . ....... . ++.+.+++....
T Consensus 96 iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv 175 (397)
T 4gyi_A 96 VYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF 175 (397)
T ss_dssp CSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 38888999999999999999889999999987532110 0 0000001 1 122333333221
Q ss_pred cCC------eeEEEEEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCC-
Q 042123 648 HAR------HSFLLYEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEY- 720 (849)
Q Consensus 648 ~~~------~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~- 720 (849)
... ..++||||++|++|..+... +....++.|++.+|.|||+. +||||||||.|||+++++
T Consensus 176 ~vp~p~~~~~~~LVME~i~G~~L~~l~~~---------~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~~dgd 243 (397)
T 4gyi_A 176 PVPEPIAQSRHTIVMSLVDALPMRQVSSV---------PDPASLYADLIALILRLAKH---GLIHGDFNEFNILIREEKD 243 (397)
T ss_dssp SCCCEEEEETTEEEEECCSCEEGGGCCCC---------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEEEEEC
T ss_pred CCCeeeeccCceEEEEecCCccHhhhccc---------HHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeCCCC
Confidence 111 23699999999888765421 23457889999999999998 999999999999998876
Q ss_pred ---------cEEEeeecCCcccC
Q 042123 721 ---------EAHVADFGIAKSLK 734 (849)
Q Consensus 721 ---------~~kl~DfG~a~~~~ 734 (849)
.+.|+||+-+....
T Consensus 244 ~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 244 AEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp SSCTTSEEEEEEECCCTTCEETT
T ss_pred cccccccccceEEEEeCCcccCC
Confidence 38999999876543
No 394
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.53 E-value=5e-13 Score=147.11 Aligned_cols=290 Identities=13% Similarity=0.109 Sum_probs=150.4
Q ss_pred cCCccCCCCCCCCEEEccCCc---ccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEEcCCCcccccCCcC
Q 042123 99 FIPPHIGNLKFLSQLDLTNNK---FSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLNDNQLIGYIPRP 175 (849)
Q Consensus 99 ~~~~~~~~l~~L~~L~Ls~n~---i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 175 (849)
+...+|.++.+|+.+.++.|. ++.+...+|.++.+|+.+.+..+ ++.+...+|.++.+|+.+.+..+ +..+...+
T Consensus 78 Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~i~lp~~-~~~I~~~~ 155 (394)
T 4gt6_A 78 IGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDTVTIPEG-VTSVADGM 155 (394)
T ss_dssp ECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCEEECCTT-CCEECTTT
T ss_pred EhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhhcccccccccce-eeeecccc
Confidence 444455555555555554442 44444555555555555555443 33344455555555555555432 34445555
Q ss_pred CCCCCCCCEEEccCCCCcCcCcccccCCCCCCEEeccCCcCccCCCcCccCccccchhhhccccccCCCCcchhhhhhhh
Q 042123 176 FSNLTSVSTLRLSRNDLFGSIPDEIGKMRSLSVLDLNQNQFKGVLPPSISNLTNLKELALLYNHLSGSIPPSLGNLILRQ 255 (849)
Q Consensus 176 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~ 255 (849)
|..+.+|+.+.+..+ ++.....+|.. .+|+.+.+..+-.. +...+|.++.+|+......+... .+...+..
T Consensus 156 F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~~~-i~~~af~~c~~l~~~~~~~~~~~-~~~~~~~~----- 226 (394)
T 4gt6_A 156 FSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKVTR-IGTNAFSECFALSTITSDSESYP-AIDNVLYE----- 226 (394)
T ss_dssp TTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTTCCE-ECTTTTTTCTTCCEEEECCSSSC-BSSSCEEE-----
T ss_pred eecccccccccccce-eeEeccccccc-cceeEEEECCcccc-cccchhhhccccceecccccccc-cccceeec-----
Confidence 555555555555443 33233334432 44555555544322 34445555555554444333322 11110000
Q ss_pred hhccCcCCCCCCCcccCCCCCcceeeecccccccccCCCCCCcccccEEEccCccccCchhhhhCCCCCCCEEeccCccc
Q 042123 256 LLLSGNHFTGYLPYNICRGGALEIFTVSENHFQGTIPTSLRNCTSLIRVRLNGNNLTGNISEALGIYPNLTFIDLSRNNF 335 (849)
Q Consensus 256 L~L~~n~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l 335 (849)
.+.........+.....+..+.+. +.++.....+|.++..|+.+.+.++.. .+...+|...++|+.+.+. +.+
T Consensus 227 ----~~~~~~~~~~~~~~~~~~~~~~ip-~~v~~i~~~aF~~c~~L~~i~lp~~~~-~I~~~aF~~c~~L~~i~l~-~~i 299 (394)
T 4gt6_A 227 ----KSANGDYALIRYPSQREDPAFKIP-NGVARIETHAFDSCAYLASVKMPDSVV-SIGTGAFMNCPALQDIEFS-SRI 299 (394)
T ss_dssp ----ECTTSCEEEEECCTTCCCSEEECC-TTEEEECTTTTTTCSSCCEEECCTTCC-EECTTTTTTCTTCCEEECC-TTC
T ss_pred ----ccccccccccccccccccceEEcC-CcceEcccceeeecccccEEecccccc-eecCcccccccccccccCC-Ccc
Confidence 000000000001111223333332 223334455677777777777765433 3556677777777777775 345
Q ss_pred cCcccccCCCCCCCcEEeccCCccccCCCCCccccccccccccccccccccCchhhcCCCCCcEEEccCcccc
Q 042123 336 YGEISSNWGKFPKLGTLNVSMNNITGGLPREIGNSSQLQAFDLSLNHIVGEIPKELGKLNPLTKLILRGNQIT 408 (849)
Q Consensus 336 ~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~ 408 (849)
.......|..+.+|+.+++..+ ++.+....|.++.+|+.+.|..+ ++.+...+|.++++|+.+++.+|...
T Consensus 300 ~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~ 370 (394)
T 4gt6_A 300 TELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQ 370 (394)
T ss_dssp CEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHH
T ss_pred cccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceee
Confidence 5556667777777777777654 55455667777777777777644 55555677777778888777776543
No 395
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.51 E-value=5e-17 Score=160.69 Aligned_cols=89 Identities=20% Similarity=0.228 Sum_probs=40.8
Q ss_pred cCCCCCCCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEEcCCCcccccCC-cCCCCCCC
Q 042123 103 HIGNLKFLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLNDNQLIGYIP-RPFSNLTS 181 (849)
Q Consensus 103 ~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~ 181 (849)
.+.++++|++|++++|+|+ .+|..+..+++|++|+|++|++++. + .+..+++|+.|+|++|++.++.+ ..+..+++
T Consensus 65 ~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~l-~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~ 141 (198)
T 1ds9_A 65 SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIASL-S-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDK 141 (198)
T ss_dssp CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCCH-H-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTT
T ss_pred ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCcC-C-ccccCCCCCEEECCCCcCCchhHHHHHhcCCC
Confidence 3444444555555555544 2333344444455555555554431 2 34444445555555554444322 23444555
Q ss_pred CCEEEccCCCCcC
Q 042123 182 VSTLRLSRNDLFG 194 (849)
Q Consensus 182 L~~L~Ls~N~l~~ 194 (849)
|++|++++|++.+
T Consensus 142 L~~L~l~~N~l~~ 154 (198)
T 1ds9_A 142 LEDLLLAGNPLYN 154 (198)
T ss_dssp CSEEEECSCHHHH
T ss_pred CCEEEecCCcccc
Confidence 5555555555443
No 396
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.51 E-value=6.5e-13 Score=146.22 Aligned_cols=337 Identities=12% Similarity=0.114 Sum_probs=184.4
Q ss_pred eCCccCCCCC-CCCEEeCcCCccccCCCccccCCCCCCEeeCCCCcCcccccccccccCCCCCccccCeEeccCCccccc
Q 042123 21 LHDFSFSSFP-HLAYLDLTWNGFFGTIPPQISNLSNLRYLYLGSNQFSGNILAEVSSESSGGNLRYMSRLVINDNSLSGF 99 (849)
Q Consensus 21 l~~~~~~~l~-~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~ 99 (849)
+.+.+|.+.+ .|+.+.+.. .++.+...+|.++++|+.+.++.|.-+ .++.+
T Consensus 54 Ig~~aF~~~~~~L~sI~iP~-svt~Ig~~AF~~C~~L~~i~~~~n~p~---------------------------~l~~I 105 (394)
T 4gt6_A 54 IGDRVFCNYKYVLTSVQIPD-TVTEIGSNAFYNCTSLKRVTIQDNKPS---------------------------CVKKI 105 (394)
T ss_dssp ECTTTTTTCCSCCCEEEECT-TCCEECTTTTTTCTTCCEEEEGGGCCC---------------------------CCCEE
T ss_pred cCHhhccCCCCcCEEEEECC-CeeEEhHHHhhCCccCceEeecCCCCC---------------------------eeeEe
Confidence 4445555543 356665553 355555556666666666655544311 13333
Q ss_pred CCccCCCCCCCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEEcCCCcccccCCcCCCCC
Q 042123 100 IPPHIGNLKFLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLNDNQLIGYIPRPFSNL 179 (849)
Q Consensus 100 ~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 179 (849)
...+|.++.+|+.+.+..+ ++.+...+|.++.+|+.+.+..+ +..+...+|.++.+|+.+.+.++ +..+...+|..
T Consensus 106 g~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~- 181 (394)
T 4gt6_A 106 GRQAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG- 181 (394)
T ss_dssp CTTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-
T ss_pred chhhchhcccceeeccCCc-cceehhhhhhhhcccccccccce-eeeecccceecccccccccccce-eeEeccccccc-
Confidence 3344545555555444432 33344445555555555555433 22234445555555555555443 44444555543
Q ss_pred CCCCEEEccCCCCcCcCcccccCCCCCCEEeccCCcCccCCCcCccCccccchhhhccccccCCCCcchhhhhhhhhhcc
Q 042123 180 TSVSTLRLSRNDLFGSIPDEIGKMRSLSVLDLNQNQFKGVLPPSISNLTNLKELALLYNHLSGSIPPSLGNLILRQLLLS 259 (849)
Q Consensus 180 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~L~ 259 (849)
.+|+.+.+..+-.. ....+|.++.+|+......+..... ...+..........+.. .|. ...+..+.+
T Consensus 182 ~~l~~i~ip~~~~~-i~~~af~~c~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~------~~~---~~~~~~~~i- 249 (394)
T 4gt6_A 182 TALTQIHIPAKVTR-IGTNAFSECFALSTITSDSESYPAI-DNVLYEKSANGDYALIR------YPS---QREDPAFKI- 249 (394)
T ss_dssp CCCSEEEECTTCCE-ECTTTTTTCTTCCEEEECCSSSCBS-SSCEEEECTTSCEEEEE------CCT---TCCCSEEEC-
T ss_pred cceeEEEECCcccc-cccchhhhccccceecccccccccc-cceeecccccccccccc------ccc---ccccceEEc-
Confidence 34555555444322 4444555555555555554443311 11111100000000000 000 000111111
Q ss_pred CcCCCCCCCcccCCCCCcceeeecccccccccCCCCCCcccccEEEccCccccCchhhhhCCCCCCCEEeccCccccCcc
Q 042123 260 GNHFTGYLPYNICRGGALEIFTVSENHFQGTIPTSLRNCTSLIRVRLNGNNLTGNISEALGIYPNLTFIDLSRNNFYGEI 339 (849)
Q Consensus 260 ~n~i~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 339 (849)
.+.++.+...+|..+..|+.+.+.++... .....|.++++|+.+.+. +.++.+...+|....+|+.++|..+ ++...
T Consensus 250 p~~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~ 326 (394)
T 4gt6_A 250 PNGVARIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQIL 326 (394)
T ss_dssp CTTEEEECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEEC
T ss_pred CCcceEcccceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEeh
Confidence 12233345667778888888888766543 666788899999999986 5677778889999999999999865 66566
Q ss_pred cccCCCCCCCcEEeccCCccccCCCCCccccccccccccccccccccCchhhcCCCCCcEEEccCcccc
Q 042123 340 SSNWGKFPKLGTLNVSMNNITGGLPREIGNSSQLQAFDLSLNHIVGEIPKELGKLNPLTKLILRGNQIT 408 (849)
Q Consensus 340 ~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~ 408 (849)
..+|.++.+|+.+.+..+ ++.+....|.++++|+.+++.++.... ..|....+|+.+.+..|.+.
T Consensus 327 ~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~~~ 391 (394)
T 4gt6_A 327 DDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPGSID 391 (394)
T ss_dssp TTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC-----------
T ss_pred HhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---hhhhccCCCCEEEeCCCCEE
Confidence 788999999999999755 665677889999999999999887542 56778888999888877653
No 397
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.49 E-value=1.3e-13 Score=132.19 Aligned_cols=104 Identities=24% Similarity=0.373 Sum_probs=63.7
Q ss_pred CEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEEcCCCcccccCCcCCCCCCCCCEEEccCC
Q 042123 111 SQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLNDNQLIGYIPRPFSNLTSVSTLRLSRN 190 (849)
Q Consensus 111 ~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 190 (849)
++|++++|+++. +|..+. ++|++|+|++|+|++..+..|.++++|++|+|++|+|+++.+..|..+++|++|+|++|
T Consensus 12 ~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 455555555553 333331 55566666666666555556666666666666666666666666666666666666666
Q ss_pred CCcCcCcccccCCCCCCEEeccCCcCc
Q 042123 191 DLFGSIPDEIGKMRSLSVLDLNQNQFK 217 (849)
Q Consensus 191 ~l~~~~~~~~~~l~~L~~L~L~~N~l~ 217 (849)
+|++..+..|.++++|++|+|++|.+.
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~ 115 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWD 115 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCC
Confidence 666555555666667777777777665
No 398
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.49 E-value=1.5e-13 Score=131.74 Aligned_cols=105 Identities=30% Similarity=0.305 Sum_probs=64.3
Q ss_pred cCeEeccCCcccccCCccCCCCCCCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEEcCC
Q 042123 86 MSRLVINDNSLSGFIPPHIGNLKFLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLND 165 (849)
Q Consensus 86 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 165 (849)
.+.+++++|.++. +|..+. ++|++|+|++|+|+++.|..|.++++|++|+|++|+|++..+..|.++++|++|+|++
T Consensus 11 ~~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 3556666666663 344332 5566666666666665566666666666666666666655555566666666666666
Q ss_pred CcccccCCcCCCCCCCCCEEEccCCCCc
Q 042123 166 NQLIGYIPRPFSNLTSVSTLRLSRNDLF 193 (849)
Q Consensus 166 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 193 (849)
|+|+++.+..|..+++|++|+|++|++.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 115 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWD 115 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCC
Confidence 6666665556666666666666666665
No 399
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.48 E-value=3.3e-16 Score=154.74 Aligned_cols=133 Identities=25% Similarity=0.295 Sum_probs=100.1
Q ss_pred CcceeeecccccccccCC------CCCCcccccEEEccCccccCchhhhhCCCCCCCEEeccCccccCcccccCCCCCCC
Q 042123 276 ALEIFTVSENHFQGTIPT------SLRNCTSLIRVRLNGNNLTGNISEALGIYPNLTFIDLSRNNFYGEISSNWGKFPKL 349 (849)
Q Consensus 276 ~L~~L~l~~N~l~~~~~~------~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 349 (849)
.++.++++.+.+.+..|. .+..+++|+.|++++|.+++. | .+..+++|++|+|++|++. .+|..+..+++|
T Consensus 19 ~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~l-~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L 95 (198)
T 1ds9_A 19 SVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEKI-S-SLSGMENLRILSLGRNLIK-KIENLDAVADTL 95 (198)
T ss_dssp CCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESCC-C-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHC
T ss_pred cccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCccc-c-ccccCCCCCEEECCCCCcc-cccchhhcCCcC
Confidence 445555555555555554 677778888888888888763 4 6777888888888888887 456666667888
Q ss_pred cEEeccCCccccCCCCCccccccccccccccccccccCc-hhhcCCCCCcEEEccCccccccCcc
Q 042123 350 GTLNVSMNNITGGLPREIGNSSQLQAFDLSLNHIVGEIP-KELGKLNPLTKLILRGNQITGRLPK 413 (849)
Q Consensus 350 ~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~N~i~~~~~-~~~~~l~~L~~L~L~~N~l~~~~p~ 413 (849)
++|++++|.+++ +| .+..+++|+.|++++|++++..+ ..+..+++|++|++++|++++..|.
T Consensus 96 ~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 96 EELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp SEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHT
T ss_pred CEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCcccccccc
Confidence 888888888885 44 57888899999999999885433 5788899999999999999866554
No 400
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.47 E-value=2.3e-13 Score=130.85 Aligned_cols=104 Identities=21% Similarity=0.309 Sum_probs=64.6
Q ss_pred CEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEEcCCCcccccCCcCCCCCCCCCEEEccCC
Q 042123 111 SQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLNDNQLIGYIPRPFSNLTSVSTLRLSRN 190 (849)
Q Consensus 111 ~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 190 (849)
+.+++++|+++. +|..+. ++|++|+|++|+|++..+..|.++++|+.|+|++|+|+++++..|..+++|++|+|++|
T Consensus 15 ~~l~~~~n~l~~-iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLAS-VPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCCc-cCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 455555555553 333332 55666666666666555566666666666666666666666666666667777777777
Q ss_pred CCcCcCcccccCCCCCCEEeccCCcCc
Q 042123 191 DLFGSIPDEIGKMRSLSVLDLNQNQFK 217 (849)
Q Consensus 191 ~l~~~~~~~~~~l~~L~~L~L~~N~l~ 217 (849)
+|++..+..|.++++|++|+|++|.+.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcc
Confidence 766554445666777777777777766
No 401
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.47 E-value=2.7e-13 Score=130.41 Aligned_cols=104 Identities=31% Similarity=0.340 Sum_probs=61.4
Q ss_pred CeEeccCCcccccCCccCCCCCCCCEEEccCCcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEEcCCC
Q 042123 87 SRLVINDNSLSGFIPPHIGNLKFLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLNDN 166 (849)
Q Consensus 87 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 166 (849)
+.+++++|.++ .+|..+. ++|++|+|++|+|+++.|..|.++++|++|+|++|+|+++.+..|.++++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 45566666665 3344333 55666666666666555556666666666666666666554455566666666666666
Q ss_pred cccccCCcCCCCCCCCCEEEccCCCCc
Q 042123 167 QLIGYIPRPFSNLTSVSTLRLSRNDLF 193 (849)
Q Consensus 167 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 193 (849)
+|.++++..|..+++|++|+|++|.+.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcc
Confidence 666655555666666666666666655
No 402
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.36 E-value=6.9e-15 Score=159.66 Aligned_cols=86 Identities=19% Similarity=0.182 Sum_probs=40.2
Q ss_pred CCCceeeccCcccccc----cccccCCCCCCCEEEcCCCcccccC----CcCCCCCCCCCEEEccCCCCcCc----Cccc
Q 042123 132 SNLIFLYLYGNLLSGS----ILSSLGKLKSLFDLQLNDNQLIGYI----PRPFSNLTSVSTLRLSRNDLFGS----IPDE 199 (849)
Q Consensus 132 ~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~----~~~~~~l~~L~~L~Ls~N~l~~~----~~~~ 199 (849)
++|++|+|++|.|+.. ++..+..+++|++|+|++|.|.... +..+...++|++|+|++|.|+.. ++..
T Consensus 155 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~ 234 (372)
T 3un9_A 155 CQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARA 234 (372)
T ss_dssp CCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHH
T ss_pred CccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHH
Confidence 4455555555554421 1222344455555555555554321 23344445555555555555422 2222
Q ss_pred ccCCCCCCEEeccCCcCc
Q 042123 200 IGKMRSLSVLDLNQNQFK 217 (849)
Q Consensus 200 ~~~l~~L~~L~L~~N~l~ 217 (849)
+...++|++|+|++|.|+
T Consensus 235 L~~~~~L~~L~Ls~N~i~ 252 (372)
T 3un9_A 235 AREHPSLELLHLYFNELS 252 (372)
T ss_dssp HHHCSSCCEEECTTSSCC
T ss_pred HHhCCCCCEEeccCCCCC
Confidence 333455555555555555
No 403
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.29 E-value=4e-12 Score=137.46 Aligned_cols=102 Identities=20% Similarity=0.141 Sum_probs=52.8
Q ss_pred EeccCC-cccccCCccCCCCCCCCEEEccC-CcccCCCCCCCcCCCCCceeeccCcccccccccccCCCCCCCEEEcCCC
Q 042123 89 LVINDN-SLSGFIPPHIGNLKFLSQLDLTN-NKFSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLGKLKSLFDLQLNDN 166 (849)
Q Consensus 89 L~l~~n-~l~~~~~~~~~~l~~L~~L~Ls~-n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 166 (849)
++++++ .|+. +|. +..+++|++|+|++ |+|+++.+.+|.++++|+.|+|++|+|++..+..|.++++|+.|+|++|
T Consensus 13 v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 90 (347)
T 2ifg_A 13 LRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (347)
T ss_dssp EECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred EEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCC
Confidence 344444 4442 344 55555555555553 5555554455555555555555555555555555555555555555555
Q ss_pred cccccCCcCCCCCCCCCEEEccCCCCc
Q 042123 167 QLIGYIPRPFSNLTSVSTLRLSRNDLF 193 (849)
Q Consensus 167 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 193 (849)
+|+++++..|..++ |++|+|++|.+.
T Consensus 91 ~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 91 ALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp CCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred ccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 55555444444444 555555555544
No 404
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.28 E-value=4.4e-10 Score=122.95 Aligned_cols=106 Identities=14% Similarity=0.102 Sum_probs=46.5
Q ss_pred cCCCCCcceeeecccccccccCCCCCCcccccEEEccCccccCchhhhhCCCCCCCEEeccCccccCcccccCCCCCCCc
Q 042123 271 ICRGGALEIFTVSENHFQGTIPTSLRNCTSLIRVRLNGNNLTGNISEALGIYPNLTFIDLSRNNFYGEISSNWGKFPKLG 350 (849)
Q Consensus 271 ~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 350 (849)
|.....|+.+.+..+ ++.....+|.++.+|+.+.+..+ ++.+...+|..+++|+.+.+.++.+.......|.++.+|+
T Consensus 236 f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~ 313 (379)
T 4h09_A 236 FYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLS 313 (379)
T ss_dssp TTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCC
T ss_pred ccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCC
Confidence 333444444444433 33233344444455555544322 3333344444444555555544444434444444444455
Q ss_pred EEeccCCccccCCCCCccccccccccccc
Q 042123 351 TLNVSMNNITGGLPREIGNSSQLQAFDLS 379 (849)
Q Consensus 351 ~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~ 379 (849)
.+.|..+ ++.+....|.++.+|+.+.+.
T Consensus 314 ~i~lp~~-l~~I~~~aF~~C~~L~~i~ip 341 (379)
T 4h09_A 314 SVTLPTA-LKTIQVYAFKNCKALSTISYP 341 (379)
T ss_dssp EEECCTT-CCEECTTTTTTCTTCCCCCCC
T ss_pred EEEcCcc-ccEEHHHHhhCCCCCCEEEEC
Confidence 5444332 332333444444444444443
No 405
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.27 E-value=1.7e-10 Score=126.23 Aligned_cols=129 Identities=14% Similarity=0.024 Sum_probs=57.6
Q ss_pred CCCCCcccccEEEccCccccCchhhhhCCCCCCCEEeccCccccCcccccCCCCCCCcEEeccCCccccCCCCCcccccc
Q 042123 293 TSLRNCTSLIRVRLNGNNLTGNISEALGIYPNLTFIDLSRNNFYGEISSNWGKFPKLGTLNVSMNNITGGLPREIGNSSQ 372 (849)
Q Consensus 293 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~ 372 (849)
..+....+|+.+.+..+ ++.+...+|.....|+.+.+..+ ++......|..+.+|+.+.+..+ ++......|.++.+
T Consensus 211 ~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~ 287 (379)
T 4h09_A 211 YGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSN 287 (379)
T ss_dssp TTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTT
T ss_pred cccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccc
Confidence 34444445555544332 33333444445555555555443 33333444445555555555332 33233344445555
Q ss_pred ccccccccccccccCchhhcCCCCCcEEEccCccccccCcccccccccccccc
Q 042123 373 LQAFDLSLNHIVGEIPKELGKLNPLTKLILRGNQITGRLPKEIGSLTKLEYLD 425 (849)
Q Consensus 373 L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 425 (849)
|+.+.+.++.++.+...+|.++.+|+.+.|..+ ++.+...+|.++++|+.+.
T Consensus 288 L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ 339 (379)
T 4h09_A 288 LTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTIS 339 (379)
T ss_dssp CCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCC
T ss_pred cccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEE
Confidence 555555544444444445555555555555432 3323333444444444333
No 406
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.26 E-value=7e-12 Score=135.52 Aligned_cols=105 Identities=25% Similarity=0.215 Sum_probs=83.3
Q ss_pred CEEEccCC-cccCCCCCCCcCCCCCceeeccC-cccccccccccCCCCCCCEEEcCCCcccccCCcCCCCCCCCCEEEcc
Q 042123 111 SQLDLTNN-KFSGPIPLSFDNLSNLIFLYLYG-NLLSGSILSSLGKLKSLFDLQLNDNQLIGYIPRPFSNLTSVSTLRLS 188 (849)
Q Consensus 111 ~~L~Ls~n-~i~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 188 (849)
..++++++ +|++ +|. |..+++|++|+|++ |+|++..+..|.++++|+.|+|++|+|+++.|..|.++++|++|+|+
T Consensus 11 ~~v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 34688887 7885 555 88888888888885 88887777788888888888888888888888888888888888888
Q ss_pred CCCCcCcCcccccCCCCCCEEeccCCcCcc
Q 042123 189 RNDLFGSIPDEIGKMRSLSVLDLNQNQFKG 218 (849)
Q Consensus 189 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 218 (849)
+|+|++..+..|..++ |+.|+|++|.+..
T Consensus 89 ~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 89 FNALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp SSCCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred CCccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 8888866666666555 8888888888773
No 407
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.23 E-value=7.4e-14 Score=151.55 Aligned_cols=158 Identities=19% Similarity=0.175 Sum_probs=100.5
Q ss_pred cccCeEeccCCcccccCCcc----CC-CCCCCCEEEccCCcccCCCCCC-CcCCCCCceeeccCccccccccccc-----
Q 042123 84 RYMSRLVINDNSLSGFIPPH----IG-NLKFLSQLDLTNNKFSGPIPLS-FDNLSNLIFLYLYGNLLSGSILSSL----- 152 (849)
Q Consensus 84 ~~L~~L~l~~n~l~~~~~~~----~~-~l~~L~~L~Ls~n~i~~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~~----- 152 (849)
+.|+.|+|++|.|+...... +. +.++|++|+|++|+|+...... +..+++|+.|+|++|.|+......+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 45556666666655322222 22 2257788888888776432222 2345678888888888875444443
Q ss_pred CCCCCCCEEEcCCCcccccC----CcCCCCCCCCCEEEccCCCCcCc----CcccccCCCCCCEEeccCCcCccC----C
Q 042123 153 GKLKSLFDLQLNDNQLIGYI----PRPFSNLTSVSTLRLSRNDLFGS----IPDEIGKMRSLSVLDLNQNQFKGV----L 220 (849)
Q Consensus 153 ~~l~~L~~L~L~~N~l~~~~----~~~~~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~----~ 220 (849)
...++|++|+|++|.|+... +..+..+++|++|+|++|+|+.. ++..+...++|++|+|++|.|+.. +
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l 231 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALAL 231 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHH
Confidence 34677888888888876532 33446677888888888888643 245566677888888888888742 2
Q ss_pred CcCccCccccchhhhcccccc
Q 042123 221 PPSISNLTNLKELALLYNHLS 241 (849)
Q Consensus 221 ~~~~~~l~~L~~L~L~~N~l~ 241 (849)
...+...++|++|+|++|.|+
T Consensus 232 ~~~L~~~~~L~~L~Ls~N~i~ 252 (372)
T 3un9_A 232 ARAAREHPSLELLHLYFNELS 252 (372)
T ss_dssp HHHHHHCSSCCEEECTTSSCC
T ss_pred HHHHHhCCCCCEEeccCCCCC
Confidence 233445577777777777765
No 408
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=98.90 E-value=6.8e-09 Score=107.06 Aligned_cols=139 Identities=16% Similarity=0.095 Sum_probs=99.0
Q ss_pred HHHhcCCCcCceecCCccceEEEEEecCCcEEEEEEecccCC--CCchhhHHHHHHHHH------HhhceeecCCeeEEE
Q 042123 584 VKATNDFDAKYCIGNGGHASVYRAELPSGEVVAVKKFHSLLP--CDQTVDQKEFLTEVE------AFYGFCSHARHSFLL 655 (849)
Q Consensus 584 ~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~~ei~------~~~~~~~~~~~~~lV 655 (849)
......|+.....+.|+.+.||++... ++.+++|....... ......+...++.+. ++++++...+..|+|
T Consensus 10 ~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv 88 (263)
T 3tm0_A 10 KKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLL 88 (263)
T ss_dssp HHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEE
T ss_pred HHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEE
Confidence 445567888888898999999999765 68899999864211 111112222333222 356667777889999
Q ss_pred EEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcC-----------------------------------
Q 042123 656 YEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDC----------------------------------- 700 (849)
Q Consensus 656 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~----------------------------------- 700 (849)
|||++|.++.+... +..+...++.+++++++.||+..
T Consensus 89 ~e~i~G~~l~~~~~--------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (263)
T 3tm0_A 89 MSEADGVLCSEEYE--------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEE 160 (263)
T ss_dssp EECCSSEEHHHHCC--------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGST
T ss_pred EEecCCeehhhccC--------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccc
Confidence 99999999887632 11234578889999999999810
Q ss_pred ---------------------CCCeEecCCCCCCeeecCCCcEEEeeecCCc
Q 042123 701 ---------------------FPPIVHRDISSKNLLLDLEYEAHVADFGIAK 731 (849)
Q Consensus 701 ---------------------~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~ 731 (849)
.+.++|+|++|.||+++.+..+.|+||+.+.
T Consensus 161 ~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 161 DTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp TCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred cccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 0358999999999999876556799998764
No 409
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.89 E-value=1.3e-10 Score=124.78 Aligned_cols=63 Identities=19% Similarity=0.286 Sum_probs=31.8
Q ss_pred CCCCCEEEcCCCcccccCCcCC---CCCCCCCEEEccCCCCcCc----CcccccCCCCCCEEeccCCcCc
Q 042123 155 LKSLFDLQLNDNQLIGYIPRPF---SNLTSVSTLRLSRNDLFGS----IPDEIGKMRSLSVLDLNQNQFK 217 (849)
Q Consensus 155 l~~L~~L~L~~N~l~~~~~~~~---~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~ 217 (849)
+++|+.|+|++|.+....+..+ ..+++|++|+|+.|.+... ++..+..+++|+.|+|++|.|+
T Consensus 251 ~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 251 FPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp CTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCC
T ss_pred CCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCC
Confidence 4555555555555543111111 1345666666666666532 2222334566666666666655
No 410
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.79 E-value=6.6e-10 Score=119.29 Aligned_cols=135 Identities=18% Similarity=0.231 Sum_probs=93.3
Q ss_pred ccCCCCCCCCEEEccCCc-ccCCCCCCCcCCCCCceeeccCcccccccccccC--CCCCCCEEEcCC--Cc------ccc
Q 042123 102 PHIGNLKFLSQLDLTNNK-FSGPIPLSFDNLSNLIFLYLYGNLLSGSILSSLG--KLKSLFDLQLND--NQ------LIG 170 (849)
Q Consensus 102 ~~~~~l~~L~~L~Ls~n~-i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~L~~--N~------l~~ 170 (849)
..+..+++|+.|+|++|. +. . +. +. +++|++|+|..|.+.......+. .+++|+.|+|+. |. +..
T Consensus 166 ~ll~~~P~L~~L~L~g~~~l~-l-~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~ 241 (362)
T 2ra8_A 166 PVLDAMPLLNNLKIKGTNNLS-I-GK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNV 241 (362)
T ss_dssp HHHHTCTTCCEEEEECCBTCB-C-CS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGG
T ss_pred HHHhcCCCCcEEEEeCCCCce-e-cc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHH
Confidence 455667889999998873 32 2 22 33 78899999988888654444443 688899998853 22 111
Q ss_pred cCCcCC--CCCCCCCEEEccCCCCcCcCccccc---CCCCCCEEeccCCcCccC----CCcCccCccccchhhhcccccc
Q 042123 171 YIPRPF--SNLTSVSTLRLSRNDLFGSIPDEIG---KMRSLSVLDLNQNQFKGV----LPPSISNLTNLKELALLYNHLS 241 (849)
Q Consensus 171 ~~~~~~--~~l~~L~~L~Ls~N~l~~~~~~~~~---~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~ 241 (849)
+. ..+ ..+++|++|+|++|.+....+..+. .+++|++|+|+.|.+... ++..+..+++|+.|+|++|.++
T Consensus 242 l~-~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 242 FR-PLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp TG-GGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCC
T ss_pred HH-HHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCC
Confidence 11 122 3578999999999998744333333 478999999999999853 3344466789999999999876
No 411
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=98.77 E-value=2.5e-08 Score=102.60 Aligned_cols=131 Identities=19% Similarity=0.143 Sum_probs=87.2
Q ss_pred CCCcCceecCCccceEEEEEecCCcEEEEEEecccCCCCchhhHHHHHHHHH-------HhhceeecCCeeEEEEEeccC
Q 042123 589 DFDAKYCIGNGGHASVYRAELPSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-------AFYGFCSHARHSFLLYEFLER 661 (849)
Q Consensus 589 ~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-------~~~~~~~~~~~~~lV~e~~~~ 661 (849)
.+......+.|..+.||++...+|+.+++|..... .......+...++.+. +++++...++..++||||++|
T Consensus 21 ~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~-~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G 99 (264)
T 1nd4_A 21 GYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG-ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPG 99 (264)
T ss_dssp TCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC-TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSS
T ss_pred CCceEecccCCCCceEEEEecCCCCeEEEEeCCcc-cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCC
Confidence 34433333456669999998877888999997653 1112222333333332 245555666678999999999
Q ss_pred CChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcC-----------------------------------------
Q 042123 662 GSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDC----------------------------------------- 700 (849)
Q Consensus 662 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~----------------------------------------- 700 (849)
.++. ... .+ ...++.+++..+..||+..
T Consensus 100 ~~l~--~~~------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (264)
T 1nd4_A 100 QDLL--SSH------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPA 168 (264)
T ss_dssp EETT--TSC------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHH
T ss_pred cccC--cCc------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHH
Confidence 8884 211 11 2356777888888888642
Q ss_pred --------------CCCeEecCCCCCCeeecCCCcEEEeeecCCc
Q 042123 701 --------------FPPIVHRDISSKNLLLDLEYEAHVADFGIAK 731 (849)
Q Consensus 701 --------------~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~ 731 (849)
.+.++|+|++|.||+++.++.+.++|||.+.
T Consensus 169 ~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 169 ELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp HHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 0139999999999999877667799999875
No 412
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.53 E-value=2.7e-07 Score=99.78 Aligned_cols=135 Identities=14% Similarity=0.247 Sum_probs=92.8
Q ss_pred cCceecCCccceEEEEEecCCcEEEEEEec--ccCC---CCchhhHHHHHHHHH-------HhhceeecC---CeeEEEE
Q 042123 592 AKYCIGNGGHASVYRAELPSGEVVAVKKFH--SLLP---CDQTVDQKEFLTEVE-------AFYGFCSHA---RHSFLLY 656 (849)
Q Consensus 592 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~--~~~~---~~~~~~~~~~~~ei~-------~~~~~~~~~---~~~~lV~ 656 (849)
..+.++.|.++.||+++.. +..+++|+.. .... ......+..+++.+. +++.++.+. +..|+||
T Consensus 42 ~~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm 120 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM 120 (359)
T ss_dssp EEEECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred eEEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence 4567999999999999876 4678888865 2210 111111222333322 244455444 4588999
Q ss_pred EeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcC------------------------------------
Q 042123 657 EFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDC------------------------------------ 700 (849)
Q Consensus 657 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~------------------------------------ 700 (849)
||++|..+.+.. ...++..++..++.+++++|+.||+..
T Consensus 121 e~v~G~~l~~~~-----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (359)
T 3dxp_A 121 EFVSGRVLWDQS-----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIP 195 (359)
T ss_dssp ECCCCBCCCCTT-----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCH
T ss_pred EecCCeecCCCc-----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCCh
Confidence 999998775422 123678889999999999999999831
Q ss_pred -------------------CCCeEecCCCCCCeeecCCCc--EEEeeecCCcc
Q 042123 701 -------------------FPPIVHRDISSKNLLLDLEYE--AHVADFGIAKS 732 (849)
Q Consensus 701 -------------------~~~ivH~dlk~~Nill~~~~~--~kl~DfG~a~~ 732 (849)
.+.++|||+++.||+++.++. +.+.||+.+..
T Consensus 196 ~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 196 AMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 136999999999999997753 68999998864
No 413
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.51 E-value=1.6e-08 Score=106.63 Aligned_cols=175 Identities=20% Similarity=0.205 Sum_probs=109.4
Q ss_pred CceecCCccceEEEEEecCCcEEEEEEecccCCCCchhhHHHHHHHHHH--------------hhceeecCC---eeEEE
Q 042123 593 KYCIGNGGHASVYRAELPSGEVVAVKKFHSLLPCDQTVDQKEFLTEVEA--------------FYGFCSHAR---HSFLL 655 (849)
Q Consensus 593 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~~--------------~~~~~~~~~---~~~lV 655 (849)
.+.++.|....||++. ..+++|..... .....+.+|... .+.++.... ..|+|
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~------~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~v 94 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS------RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAG 94 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH------HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEE
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc------chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEE
Confidence 4568999999999873 56889985432 112223333221 112221222 45889
Q ss_pred EEeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcC-----------------------------------
Q 042123 656 YEFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDC----------------------------------- 700 (849)
Q Consensus 656 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~----------------------------------- 700 (849)
|||++|.++.+... ..++.+++..++.+++..++.||+..
T Consensus 95 m~~i~G~~l~~~~~-----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (304)
T 3sg8_A 95 FTKIKGVPLTPLLL-----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQ 169 (304)
T ss_dssp EECCCCEECCHHHH-----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHH
T ss_pred EcccCCeECCcccc-----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCccc
Confidence 99999988765332 24778888899999999999998611
Q ss_pred --------------------CCCeEecCCCCCCeeecC--CCcEEEeeecCCcccCCCCCC---eee-----------cc
Q 042123 701 --------------------FPPIVHRDISSKNLLLDL--EYEAHVADFGIAKSLKPDSSN---WTE-----------FA 744 (849)
Q Consensus 701 --------------------~~~ivH~dlk~~Nill~~--~~~~kl~DfG~a~~~~~~~~~---~~~-----------~~ 744 (849)
.+.++|+|++|.||+++. ...+.++||+.+....+.... ... ..
T Consensus 170 ~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l 249 (304)
T 3sg8_A 170 MKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKIL 249 (304)
T ss_dssp HHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHH
Confidence 135899999999999998 456789999988653221000 000 00
Q ss_pred CCccccc-cccccCCCCCccchHHHHHHHHHHHHhCCCCCC
Q 042123 745 GTCGYIA-PELAYTMKITEKCDVYSFGVLMWEVIKGKHPRD 784 (849)
Q Consensus 745 g~~~y~a-PE~~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~ 784 (849)
...++.. |+.... .....+.|++|.++|.+.+|+.+|-
T Consensus 250 ~~Y~~~~~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~~~ 288 (304)
T 3sg8_A 250 NHYKHKDIPTVLEK--YRMKEKYWSFEKIIYGKEYGYMDWY 288 (304)
T ss_dssp HHHTCSCHHHHHHH--HHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHcCCCCcHHHHHH--HHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 0001111 222111 1223689999999999999988863
No 414
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.43 E-value=1.4e-08 Score=98.24 Aligned_cols=25 Identities=16% Similarity=0.080 Sum_probs=14.9
Q ss_pred CCCccccCCCCCCEeeCCCC-cCccc
Q 042123 45 TIPPQISNLSNLRYLYLGSN-QFSGN 69 (849)
Q Consensus 45 ~~~~~~~~l~~L~~L~L~~N-~l~~~ 69 (849)
.+...+...+.|++|+|++| +|...
T Consensus 27 ~l~~~l~~~~~L~~L~L~~n~~i~~~ 52 (185)
T 1io0_A 27 TLKRIQNNDPDLEEVNLNNIMNIPVP 52 (185)
T ss_dssp HHHHHHTTCTTCCEEECTTCTTCCHH
T ss_pred HHHHHHhcCCCCCEEEecCCCCCCHH
Confidence 33445556666777777776 66543
No 415
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.37 E-value=4.7e-08 Score=94.57 Aligned_cols=114 Identities=21% Similarity=0.171 Sum_probs=70.4
Q ss_pred CCCcccccEEEccCc-cccC----chhhhhCCCCCCCEEeccCccccCc----ccccCCCCCCCcEEeccCCccccC---
Q 042123 295 LRNCTSLIRVRLNGN-NLTG----NISEALGIYPNLTFIDLSRNNFYGE----ISSNWGKFPKLGTLNVSMNNITGG--- 362 (849)
Q Consensus 295 ~~~l~~L~~L~L~~n-~l~~----~~~~~~~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~i~~~--- 362 (849)
+...++|++|+|++| .|.. .+...+...++|++|+|++|.+... +...+...+.|++|+|++|.|+..
T Consensus 32 l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~ 111 (185)
T 1io0_A 32 QNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGIL 111 (185)
T ss_dssp HTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHH
T ss_pred HhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHH
Confidence 444556666666666 6553 2334455566677777777776532 223333445677777777777632
Q ss_pred -CCCCcccccccccccc--cccccccc----CchhhcCCCCCcEEEccCcccc
Q 042123 363 -LPREIGNSSQLQAFDL--SLNHIVGE----IPKELGKLNPLTKLILRGNQIT 408 (849)
Q Consensus 363 -~p~~~~~l~~L~~L~L--~~N~i~~~----~~~~~~~l~~L~~L~L~~N~l~ 408 (849)
+...+...+.|++|+| ++|.|... +...+...++|++|+|++|.+.
T Consensus 112 ~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 112 ALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 2334555567777777 67777643 3345556688999999998886
No 416
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.35 E-value=5.5e-08 Score=98.75 Aligned_cols=84 Identities=32% Similarity=0.408 Sum_probs=46.1
Q ss_pred CCCCCCCEEeccCccccC--cccccCCCCCCCcEEeccCCccccCCCCCccccccccccccccccccccCchhhcCCCCC
Q 042123 320 GIYPNLTFIDLSRNNFYG--EISSNWGKFPKLGTLNVSMNNITGGLPREIGNSSQLQAFDLSLNHIVGEIPKELGKLNPL 397 (849)
Q Consensus 320 ~~l~~L~~L~Ls~N~l~~--~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L 397 (849)
..+++|+.|+||+|+|.+ .++..+..+++|+.|+|++|.|++. ..+. .+..+ +|
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~---------------------~l~~l-~L 222 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELD---------------------KIKGL-KL 222 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGG---------------------GGTTS-CC
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhh---------------------hcccC-Cc
Confidence 446666777777776665 2234444556666666666665532 1111 12223 56
Q ss_pred cEEEccCccccccCcc-------cccccccccccccc
Q 042123 398 TKLILRGNQITGRLPK-------EIGSLTKLEYLDFS 427 (849)
Q Consensus 398 ~~L~L~~N~l~~~~p~-------~~~~l~~L~~L~l~ 427 (849)
++|+|++|++.+..|. .+..+++|+.||-.
T Consensus 223 ~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LDg~ 259 (267)
T 3rw6_A 223 EELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLDGH 259 (267)
T ss_dssp SEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEESSC
T ss_pred ceEEccCCcCccccCcchhHHHHHHHHCcccCeECCc
Confidence 6777777776654442 35566677766643
No 417
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.27 E-value=3.4e-08 Score=100.32 Aligned_cols=63 Identities=25% Similarity=0.354 Sum_probs=30.0
Q ss_pred CCCCCCEEEcCCCcccccC--CcCCCCCCCCCEEEccCCCCcCcCcccccCCC--CCCEEeccCCcCcc
Q 042123 154 KLKSLFDLQLNDNQLIGYI--PRPFSNLTSVSTLRLSRNDLFGSIPDEIGKMR--SLSVLDLNQNQFKG 218 (849)
Q Consensus 154 ~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~--~L~~L~L~~N~l~~ 218 (849)
++++|+.|+|++|+|+++. +..+..+++|++|+|++|+|++. ..+..++ +|++|+|++|.+.+
T Consensus 168 ~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~ 234 (267)
T 3rw6_A 168 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCD 234 (267)
T ss_dssp HCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGG
T ss_pred hCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCcc
Confidence 3445555555555555432 23334455555555555555432 1222222 55555555555553
No 418
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.00 E-value=1.4e-05 Score=84.71 Aligned_cols=129 Identities=17% Similarity=0.169 Sum_probs=89.3
Q ss_pred CCCcCceecCCccceEEEEEecCCcEEEEEEecccCCCCchhhHHHHHHHHHH---hhc---------eeecCCeeEEEE
Q 042123 589 DFDAKYCIGNGGHASVYRAELPSGEVVAVKKFHSLLPCDQTVDQKEFLTEVEA---FYG---------FCSHARHSFLLY 656 (849)
Q Consensus 589 ~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~~---~~~---------~~~~~~~~~lV~ 656 (849)
.....+.++.|....||++ +..+++|...... ....+..|... +.. .... +..++||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~~------~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~-~~~~lvm 106 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRDS------VRISQKRELELYRFLENCKLSYQIPAVVYQ-SDRFNIM 106 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSHH------HHHHHHHHHHHHHHHTTSCCSSBCCCEEEE-CSSCEEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcHH------HHHHHHHHHHHHHHHHhcCCCCCcceEEec-CCcEEEE
Confidence 5666788999999999998 6678899764321 11223333321 111 0001 4568999
Q ss_pred EeccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCC-----------------------------------
Q 042123 657 EFLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCF----------------------------------- 701 (849)
Q Consensus 657 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~----------------------------------- 701 (849)
||++|.++.+... ..++..+...++.+++..++.||+...
T Consensus 107 e~i~G~~l~~~~~-----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (320)
T 3r70_A 107 KYIKGERITYEQY-----HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLL 181 (320)
T ss_dssp ECCCCBCCCHHHH-----TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCC
T ss_pred eecCCcccccccc-----ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccc
Confidence 9999988864321 236777788888888888888885322
Q ss_pred -------------------------CCeEecCCCCCCeeecCCCcEEEeeecCCccc
Q 042123 702 -------------------------PPIVHRDISSKNLLLDLEYEAHVADFGIAKSL 733 (849)
Q Consensus 702 -------------------------~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~ 733 (849)
+.++|+|++|.||+++.+..+.++||+.+...
T Consensus 182 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 182 TDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp CHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred cccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 23599999999999998666799999988653
No 419
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.87 E-value=2.9e-06 Score=79.69 Aligned_cols=82 Identities=11% Similarity=0.049 Sum_probs=35.2
Q ss_pred CCceeeccCcccccccccccCCCCCCCEEEcCCCc-ccccCCcCCCCC----CCCCEEEccCCC-CcCcCcccccCCCCC
Q 042123 133 NLIFLYLYGNLLSGSILSSLGKLKSLFDLQLNDNQ-LIGYIPRPFSNL----TSVSTLRLSRND-LFGSIPDEIGKMRSL 206 (849)
Q Consensus 133 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l----~~L~~L~Ls~N~-l~~~~~~~~~~l~~L 206 (849)
+|+.|+++++.|+......+.++++|++|+|++|. |++..-..+..+ ++|++|+|++|. |+...-..+.++++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 34444444444443333334444444444444442 322111122222 235555555542 443333334445555
Q ss_pred CEEeccCC
Q 042123 207 SVLDLNQN 214 (849)
Q Consensus 207 ~~L~L~~N 214 (849)
++|+|+++
T Consensus 142 ~~L~L~~c 149 (176)
T 3e4g_A 142 KYLFLSDL 149 (176)
T ss_dssp CEEEEESC
T ss_pred CEEECCCC
Confidence 55555554
No 420
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.78 E-value=1e-05 Score=75.93 Aligned_cols=82 Identities=10% Similarity=0.060 Sum_probs=40.3
Q ss_pred CcceeeecccccccccCCCCCCcccccEEEccCcc-ccCchhhhhCCC----CCCCEEeccCcc-ccCcccccCCCCCCC
Q 042123 276 ALEIFTVSENHFQGTIPTSLRNCTSLIRVRLNGNN-LTGNISEALGIY----PNLTFIDLSRNN-FYGEISSNWGKFPKL 349 (849)
Q Consensus 276 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~n~-l~~~~~~~~~~l----~~L~~L~Ls~N~-l~~~~~~~~~~l~~L 349 (849)
.|+.||++++.++...-..+.++++|+.|+|++|. |++.--..+..+ ++|++|+|++|. +++..-..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 45555555555544444444555556666666553 544333344433 245555555553 443333334445555
Q ss_pred cEEeccCC
Q 042123 350 GTLNVSMN 357 (849)
Q Consensus 350 ~~L~Ls~N 357 (849)
++|+|++|
T Consensus 142 ~~L~L~~c 149 (176)
T 3e4g_A 142 KYLFLSDL 149 (176)
T ss_dssp CEEEEESC
T ss_pred CEEECCCC
Confidence 55555554
No 421
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.75 E-value=2.8e-05 Score=69.71 Aligned_cols=43 Identities=21% Similarity=0.315 Sum_probs=39.8
Q ss_pred cccceeccCCcccccCCCccccccCCCcEEeccCCccccCCCC
Q 042123 440 KSLEKLNLSHNNLSGSIPSCFEGMHGLSFIDMSYNELQCPVPN 482 (849)
Q Consensus 440 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~ 482 (849)
++|+.|+|++|+|+.+.++.|..+++|+.|+|++|||.|+|..
T Consensus 31 ~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~CdC~l 73 (130)
T 3rfe_A 31 VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRCDCRL 73 (130)
T ss_dssp TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBCSGGG
T ss_pred cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeeccCcc
Confidence 4689999999999999999999999999999999999999864
No 422
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=97.68 E-value=9.7e-05 Score=77.44 Aligned_cols=125 Identities=17% Similarity=0.147 Sum_probs=79.0
Q ss_pred CceecCCccceEEEEEecCCcEEEEEEecccCCCCchhhHHHHHHHHHH--------------hhceee-cCCeeEEEEE
Q 042123 593 KYCIGNGGHASVYRAELPSGEVVAVKKFHSLLPCDQTVDQKEFLTEVEA--------------FYGFCS-HARHSFLLYE 657 (849)
Q Consensus 593 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~~--------------~~~~~~-~~~~~~lV~e 657 (849)
.+.++.|....||+. |..+++|..... .....+..|... .+.++. ..+..++|||
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~~------~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e 93 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKSQ------QGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYR 93 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESSH------HHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEE
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCCc------hHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEe
Confidence 456888999999998 567888884321 112233333221 222332 3455789999
Q ss_pred eccCCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhc--------------------------------------
Q 042123 658 FLERGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHD-------------------------------------- 699 (849)
Q Consensus 658 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-------------------------------------- 699 (849)
|++|..+.+... ..++..+...++.++++.++.||+.
T Consensus 94 ~i~G~~l~~~~~-----~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~ 168 (306)
T 3tdw_A 94 KVQGQILGEDGM-----AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESL 168 (306)
T ss_dssp CCCSEECHHHHH-----TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHH
T ss_pred ccCCeECchhhh-----hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhh
Confidence 999988766321 1234455555555555555555542
Q ss_pred -------------------CCCCeEecCCCCCCeeecC---CCc-EEEeeecCCcc
Q 042123 700 -------------------CFPPIVHRDISSKNLLLDL---EYE-AHVADFGIAKS 732 (849)
Q Consensus 700 -------------------~~~~ivH~dlk~~Nill~~---~~~-~kl~DfG~a~~ 732 (849)
..+.++|+|+++.||+++. ++. +.|+||+.+..
T Consensus 169 ~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 169 RDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 1235799999999999987 455 48999998764
No 423
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.63 E-value=0.00018 Score=77.26 Aligned_cols=31 Identities=19% Similarity=0.201 Sum_probs=25.8
Q ss_pred CCeEecCCCCCCeeecCCCcEEEeeecCCcc
Q 042123 702 PPIVHRDISSKNLLLDLEYEAHVADFGIAKS 732 (849)
Q Consensus 702 ~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~ 732 (849)
+.++|+|+.+.||+++++..+.|+||+.+..
T Consensus 222 ~~l~HgDl~~~Nil~~~~~~~~vIDwe~a~~ 252 (357)
T 3ats_A 222 PVLLWGDARVGNVLYRDFQPVAVLDWEMVAL 252 (357)
T ss_dssp CEEECSSCSGGGEEEETTEEEEECCGGGCEE
T ss_pred ceEEeCCCCCCeEEEeCCcEEEEEccccccc
Confidence 4789999999999999644578999998753
No 424
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=97.62 E-value=0.00011 Score=75.64 Aligned_cols=123 Identities=19% Similarity=0.150 Sum_probs=83.0
Q ss_pred eecCCccc-eEEEEEec-CCcEEEEEEecccCCCCchhhHHHHHHHHH------------HhhceeecCCeeEEEEEecc
Q 042123 595 CIGNGGHA-SVYRAELP-SGEVVAVKKFHSLLPCDQTVDQKEFLTEVE------------AFYGFCSHARHSFLLYEFLE 660 (849)
Q Consensus 595 ~lG~G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~ei~------------~~~~~~~~~~~~~lV~e~~~ 660 (849)
.+..|..| .||+.... ++..+++|+.... ....+..|.. ++++++.+.+..++|||+++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~-------~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~ 103 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS-------VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIP 103 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH-------HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCC
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC-------CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeC
Confidence 45667666 58998654 4667899985432 1112223322 25667778889999999999
Q ss_pred CCChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcC----------------------------------------
Q 042123 661 RGSLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDC---------------------------------------- 700 (849)
Q Consensus 661 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~---------------------------------------- 700 (849)
|.++.+..... ..+...+..+++..+..||+..
T Consensus 104 G~~~~~~~~~~-------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (272)
T 4gkh_A 104 GKTAFQVLEEY-------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPV 176 (272)
T ss_dssp SEEHHHHHHHC-------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCH
T ss_pred CccccccccCC-------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHH
Confidence 98877654321 1233456666777777777421
Q ss_pred ---------------CCCeEecCCCCCCeeecCCCcEEEeeecCCc
Q 042123 701 ---------------FPPIVHRDISSKNLLLDLEYEAHVADFGIAK 731 (849)
Q Consensus 701 ---------------~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~ 731 (849)
.+.++|+|+.+.||+++.++.+-|+||+.+.
T Consensus 177 ~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 177 EQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp HHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 0237899999999999987777799998775
No 425
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=97.55 E-value=0.00018 Score=77.24 Aligned_cols=141 Identities=13% Similarity=0.167 Sum_probs=78.7
Q ss_pred CCCcCceecCCccceEEEEEecCCcEEEEEEecccCCCCchhhHHHHHHHHH-------HhhceeecC-CeeEEEEEecc
Q 042123 589 DFDAKYCIGNGGHASVYRAELPSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE-------AFYGFCSHA-RHSFLLYEFLE 660 (849)
Q Consensus 589 ~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~-------~~~~~~~~~-~~~~lV~e~~~ 660 (849)
.....+.++.|....+|+.+. +++.+++|..... .....+...++.+. .+++++... +..|+||||++
T Consensus 42 ~~~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~---~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~ 117 (362)
T 3ovc_A 42 SVSDLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA---DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQ 117 (362)
T ss_dssp CCEEEEEEEECSSEEEEEEEE-TTEEEEEEEESCC---HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCC
T ss_pred CCceEEECCCCCcceEEEEEE-CCcEEEEEeCCch---hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecC
Confidence 334456789999999999976 5788999987432 11111222222222 134444443 56899999999
Q ss_pred CCChhhh------------------hcccccc--------------cCCCHHHHH---------------------HHHH
Q 042123 661 RGSLAAI------------------LNTDAAA--------------QELGWSQRM---------------------NVIK 687 (849)
Q Consensus 661 ~gsL~~~------------------l~~~~~~--------------~~l~~~~~~---------------------~i~~ 687 (849)
|.++.+. ++..... ..-+|.+.. ....
T Consensus 118 G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 197 (362)
T 3ovc_A 118 GVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVAQ 197 (362)
T ss_dssp SEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHHH
T ss_pred CCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccchH
Confidence 8665421 0110000 000111110 1111
Q ss_pred HHHHHHHHHHhcC-CCCeEecCCCCCCeeecCCCcEEEeeecCCccc
Q 042123 688 AVAHALSYLHHDC-FPPIVHRDISSKNLLLDLEYEAHVADFGIAKSL 733 (849)
Q Consensus 688 ~ia~~l~~LH~~~-~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~ 733 (849)
.+....+++.... .+.++|+|+.+.||+++.++.+.|+||+.+...
T Consensus 198 ~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~g 244 (362)
T 3ovc_A 198 ALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFG 244 (362)
T ss_dssp HHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccC
Confidence 2222222332110 146899999999999987777889999988653
No 426
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=97.39 E-value=0.00041 Score=71.72 Aligned_cols=69 Identities=20% Similarity=0.197 Sum_probs=43.8
Q ss_pred CcCceecCCccceEEEEEecCCcEEEEEEecccCCCCchhhHHHHHHHHHHh---hc--------eeecCCeeEEEEEec
Q 042123 591 DAKYCIGNGGHASVYRAELPSGEVVAVKKFHSLLPCDQTVDQKEFLTEVEAF---YG--------FCSHARHSFLLYEFL 659 (849)
Q Consensus 591 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~~~---~~--------~~~~~~~~~lV~e~~ 659 (849)
...+.+|.|.++.||+++..+|+.++||+....... ....+..|+..+ .. .+.. +..++||||+
T Consensus 18 ~~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~----~~~~~~~E~~~L~~L~~~~~v~vP~v~~~-~~~~lvme~l 92 (288)
T 3d1u_A 18 AAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPA----LDGLFRAEALGLDWLGRSFGSPVPQVAGW-DDRTLAMEWV 92 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCC----CTTHHHHHHHHHHHHTCSTTCCSCCEEEE-ETTEEEEECC
T ss_pred cceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcc----hhHHHHHHHHHHHHHHhcCCCCcCeEEEe-cCcEEEEEec
Confidence 346689999999999998888999999986432111 012233333321 11 1111 2358999999
Q ss_pred cCCCh
Q 042123 660 ERGSL 664 (849)
Q Consensus 660 ~~gsL 664 (849)
+++++
T Consensus 93 ~g~~~ 97 (288)
T 3d1u_A 93 DERPP 97 (288)
T ss_dssp CCCCC
T ss_pred ccCCC
Confidence 99875
No 427
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.35 E-value=0.00051 Score=73.18 Aligned_cols=30 Identities=27% Similarity=0.411 Sum_probs=27.3
Q ss_pred CCeEecCCCCCCeeecCCCcEEEeeecCCc
Q 042123 702 PPIVHRDISSKNLLLDLEYEAHVADFGIAK 731 (849)
Q Consensus 702 ~~ivH~dlk~~Nill~~~~~~kl~DfG~a~ 731 (849)
+.++|+|+++.||+++.++.+.++||+.+.
T Consensus 222 ~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 222 PNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp CCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred CceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 489999999999999888899999999775
No 428
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.34 E-value=3e-05 Score=74.22 Aligned_cols=112 Identities=16% Similarity=0.086 Sum_probs=54.6
Q ss_pred CCCCCCCEEEccCC-cccC----CCCCCCcCCCCCceeeccCcccccccc----cccCCCCCCCEEEcCCCccccc----
Q 042123 105 GNLKFLSQLDLTNN-KFSG----PIPLSFDNLSNLIFLYLYGNLLSGSIL----SSLGKLKSLFDLQLNDNQLIGY---- 171 (849)
Q Consensus 105 ~~l~~L~~L~Ls~n-~i~~----~~~~~~~~l~~L~~L~L~~N~l~~~~~----~~~~~l~~L~~L~L~~N~l~~~---- 171 (849)
.+-+.|++|+|++| +|.. .+..++...+.|+.|+|++|.|..... .++..-+.|++|+|++|+|...
T Consensus 38 ~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~a 117 (197)
T 1pgv_A 38 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLAR 117 (197)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHH
T ss_pred hcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHH
Confidence 34455666666654 5542 122334445566666666666653322 2233445566666666665432
Q ss_pred CCcCCCCCCCCCEEEccCCC---CcC----cCcccccCCCCCCEEeccCCcC
Q 042123 172 IPRPFSNLTSVSTLRLSRND---LFG----SIPDEIGKMRSLSVLDLNQNQF 216 (849)
Q Consensus 172 ~~~~~~~l~~L~~L~Ls~N~---l~~----~~~~~~~~l~~L~~L~L~~N~l 216 (849)
..+++..-+.|++|+|++|. +.. .+.+.+..-++|+.|+++.|.+
T Consensus 118 la~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 118 LLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCc
Confidence 12334445556666665432 221 1223344445566666555543
No 429
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.27 E-value=3.1e-05 Score=74.15 Aligned_cols=121 Identities=15% Similarity=0.161 Sum_probs=65.7
Q ss_pred CCccccCCCCCCEeeCCCC-cCcccccccccccCCCCCccccCeEeccCCcccccCCccCCCCCCCCEEEccCCcccCCC
Q 042123 46 IPPQISNLSNLRYLYLGSN-QFSGNILAEVSSESSGGNLRYMSRLVINDNSLSGFIPPHIGNLKFLSQLDLTNNKFSGPI 124 (849)
Q Consensus 46 ~~~~~~~l~~L~~L~L~~N-~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~ 124 (849)
+...+.+-+.|++|+|++| +|.+.....+ ..++..-+.|+.|+|++|+|.+..
T Consensus 33 l~~ll~~n~~L~~L~L~~nn~igd~ga~~l--------------------------a~aL~~N~~L~~L~L~~n~igd~g 86 (197)
T 1pgv_A 33 INRLREDDTDLKEVNINNMKRVSKERIRSL--------------------------IEAACNSKHIEKFSLANTAISDSE 86 (197)
T ss_dssp HHHHHTTCSSCCEEECTTCCSSCHHHHHHH--------------------------HHHHTTCSCCCEEECTTSCCBHHH
T ss_pred HHHHHhcCCCccEEECCCCCCCCHHHHHHH--------------------------HHHHhhCCCcCEEEccCCCCChHH
Confidence 3344455567777777774 6654332222 123334455666666666665322
Q ss_pred ----CCCCcCCCCCceeeccCccccccc----ccccCCCCCCCEEEcCCCc---cccc----CCcCCCCCCCCCEEEccC
Q 042123 125 ----PLSFDNLSNLIFLYLYGNLLSGSI----LSSLGKLKSLFDLQLNDNQ---LIGY----IPRPFSNLTSVSTLRLSR 189 (849)
Q Consensus 125 ----~~~~~~l~~L~~L~L~~N~l~~~~----~~~~~~l~~L~~L~L~~N~---l~~~----~~~~~~~l~~L~~L~Ls~ 189 (849)
..++...+.|++|+|++|.|.... ..++..-+.|++|+|++|. +... ..+++..-+.|+.|+++.
T Consensus 87 a~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~ 166 (197)
T 1pgv_A 87 ARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISF 166 (197)
T ss_dssp HTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCC
T ss_pred HHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccC
Confidence 223334566677777777665332 2345555667777776542 2221 223455566777788777
Q ss_pred CCC
Q 042123 190 NDL 192 (849)
Q Consensus 190 N~l 192 (849)
|.+
T Consensus 167 ~~~ 169 (197)
T 1pgv_A 167 ASM 169 (197)
T ss_dssp CCH
T ss_pred CCc
Confidence 654
No 430
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.09 E-value=0.0018 Score=70.50 Aligned_cols=30 Identities=20% Similarity=0.296 Sum_probs=25.6
Q ss_pred CCeEecCCCCCCeeecCCCcEEEeeecCCcc
Q 042123 702 PPIVHRDISSKNLLLDLEYEAHVADFGIAKS 732 (849)
Q Consensus 702 ~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~ 732 (849)
+.++|||+.+.||+++.+ .+++.||..+..
T Consensus 227 ~~L~HGDl~~~Nil~~~~-~~~lID~e~a~~ 256 (397)
T 2olc_A 227 ETLIHGDLHTGSIFASEH-ETKVIDPEFAFY 256 (397)
T ss_dssp CEEECSCCSGGGEEECSS-CEEECCCTTCEE
T ss_pred CceeeCCCCcCcEEEeCC-CeEEEeCccccc
Confidence 379999999999999876 489999987764
No 431
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.94 E-value=0.0012 Score=58.93 Aligned_cols=36 Identities=28% Similarity=0.169 Sum_probs=22.4
Q ss_pred CCCEEEccCCcccCCCCCCCcCCCCCceeeccCccc
Q 042123 109 FLSQLDLTNNKFSGPIPLSFDNLSNLIFLYLYGNLL 144 (849)
Q Consensus 109 ~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l 144 (849)
+|++|+|++|+|+.+.+..|..+++|+.|+|++|.+
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 466666666666665555666666666666666654
No 432
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=96.71 E-value=0.0067 Score=63.13 Aligned_cols=134 Identities=18% Similarity=0.178 Sum_probs=76.6
Q ss_pred cCceecCCccceEEEEEecCCcEEEEEEecccCCCCchhhHHHHHHHHH--------HhhceeecCCeeEEEEEeccCCC
Q 042123 592 AKYCIGNGGHASVYRAELPSGEVVAVKKFHSLLPCDQTVDQKEFLTEVE--------AFYGFCSHARHSFLLYEFLERGS 663 (849)
Q Consensus 592 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~--------~~~~~~~~~~~~~lV~e~~~~gs 663 (849)
..+.|+.|....+|+... ++..++||...... ......+...++.+. +.+.++...+..++||||+++..
T Consensus 40 ~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~~-~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~ 117 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLIND-EVQTVFVKINERSY-RSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSK 117 (312)
T ss_dssp EEEEECCSSSSEEEEEES-SSCEEEEEEEEGGG-HHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCC
T ss_pred eeEEeCCccceeeeEEEE-CCCeEEEEeCCccc-HHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCC
Confidence 346799999999999987 46788999865321 001111112222222 24455556678899999999976
Q ss_pred hhh-----------hhccccc--c-------------c----CCCHHHHH---HHHHH----------------HH-HHH
Q 042123 664 LAA-----------ILNTDAA--A-------------Q----ELGWSQRM---NVIKA----------------VA-HAL 693 (849)
Q Consensus 664 L~~-----------~l~~~~~--~-------------~----~l~~~~~~---~i~~~----------------ia-~~l 693 (849)
+.. .+|.... . + .-+|.+.. ++..+ +. ...
T Consensus 118 ~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l~ 197 (312)
T 3jr1_A 118 NKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIVA 197 (312)
T ss_dssp CCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHHH
T ss_pred CCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 421 1222111 0 0 01454332 11111 11 112
Q ss_pred HHHHh-cCCCCeEecCCCCCCeeecCCCcEEEeeec
Q 042123 694 SYLHH-DCFPPIVHRDISSKNLLLDLEYEAHVADFG 728 (849)
Q Consensus 694 ~~LH~-~~~~~ivH~dlk~~Nill~~~~~~kl~DfG 728 (849)
..|.. ...|.++|+|+.+.|++++.++ +.|.|++
T Consensus 198 ~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 198 DTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 23321 1235799999999999999887 8888874
No 433
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=96.69 E-value=0.0079 Score=65.89 Aligned_cols=76 Identities=12% Similarity=0.135 Sum_probs=46.6
Q ss_pred CCeEecCCCCCCeeecCCCcEEEeeecCCcccCCCCCCeeeccC--CccccccccccCC---CCCccchHHHHHHHHHHH
Q 042123 702 PPIVHRDISSKNLLLDLEYEAHVADFGIAKSLKPDSSNWTEFAG--TCGYIAPELAYTM---KITEKCDVYSFGVLMWEV 776 (849)
Q Consensus 702 ~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~g--~~~y~aPE~~~~~---~~~~~~Dv~SlGvil~el 776 (849)
+.++|+|+++.||+++.++ ++++||+.+....+.-.. ..... ...|.+|+..... .-....++.+....+|+.
T Consensus 232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dl-a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (420)
T 2pyw_A 232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDI-GAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNL 309 (420)
T ss_dssp CEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHH-HHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHH
T ss_pred CeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHH-HHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHH
Confidence 3799999999999998876 999999988653211000 00010 1345666654311 112235556777788877
Q ss_pred HhC
Q 042123 777 IKG 779 (849)
Q Consensus 777 ~tg 779 (849)
+++
T Consensus 310 y~~ 312 (420)
T 2pyw_A 310 FNK 312 (420)
T ss_dssp HHH
T ss_pred HHH
Confidence 764
No 434
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.48 E-value=0.019 Score=60.30 Aligned_cols=153 Identities=16% Similarity=0.174 Sum_probs=81.0
Q ss_pred ccHHHHHHHhcCCCc-----CceecCCccceEEEEEecCCcEEEEEEecccCCCCchhhHHHHHHHHHH-------hhce
Q 042123 578 ILYDEIVKATNDFDA-----KYCIGNGGHASVYRAELPSGEVVAVKKFHSLLPCDQTVDQKEFLTEVEA-------FYGF 645 (849)
Q Consensus 578 ~~~~~~~~~~~~f~~-----~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~ei~~-------~~~~ 645 (849)
++.+++......|.. .+.|+.|....+|+....+| .+++|.............+..+.+.+.. ++..
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~~~~~l~~e~~~l~~L~~~g~~vP~~~~~ 85 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRVEKNDLPFFLGLMQHLAAKGLSCPLPLPR 85 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC---CCHHHHHHHHHHHHHHTTCCCCCBCCB
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCCCHHHHHHHHHHHHHHHHCCCCCCcccCC
Confidence 344566666666765 24577788899999977655 6889987652121222222233333322 1111
Q ss_pred ------eecCCeeEEEEEeccCCChhh--------------hhcccc----cc--cCC---CHHHHHH------------
Q 042123 646 ------CSHARHSFLLYEFLERGSLAA--------------ILNTDA----AA--QEL---GWSQRMN------------ 684 (849)
Q Consensus 646 ------~~~~~~~~lV~e~~~~gsL~~--------------~l~~~~----~~--~~l---~~~~~~~------------ 684 (849)
....+..++||+|++|..+.. .+|... .. ... .|.....
T Consensus 86 ~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~ 165 (322)
T 2ppq_A 86 KDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKG 165 (322)
T ss_dssp TTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTT
T ss_pred CCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhh
Confidence 112356789999999865321 011110 00 001 1222110
Q ss_pred HHHHHHHHHHHHHhcC----CCCeEecCCCCCCeeecCCCcEEEeeecCCc
Q 042123 685 VIKAVAHALSYLHHDC----FPPIVHRDISSKNLLLDLEYEAHVADFGIAK 731 (849)
Q Consensus 685 i~~~ia~~l~~LH~~~----~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~ 731 (849)
+...+...++++++.. .++++|+|+.+.||+++.++.+.++||+.+.
T Consensus 166 l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 166 LREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp HHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 0112444556665321 2378999999999999887666899998765
No 435
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.45 E-value=0.0096 Score=57.10 Aligned_cols=98 Identities=21% Similarity=0.213 Sum_probs=64.4
Q ss_pred ChhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccCCCCCCeee
Q 042123 663 SLAAILNTDAAAQELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLKPDSSNWTE 742 (849)
Q Consensus 663 sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~ 742 (849)
+|.++|.... .+++++++|.++.|.+.+|.-+-.... + ..+=+.|..|++..+|.|...+ +.+.
T Consensus 34 SL~eIL~~~~--~PlsEEqaWALc~Qc~~~L~~~~~~~~-~-~~~i~~~~~i~l~~dG~V~f~~-~~s~----------- 97 (229)
T 2yle_A 34 SLEEILRLYN--QPINEEQAWAVCYQCCGSLRAAARRRQ-P-RHRVRSAAQIRVWRDGAVTLAP-AADD----------- 97 (229)
T ss_dssp EHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHTTC-C-CCCCCSGGGEEEETTSCEEECC-C--------------
T ss_pred cHHHHHHHcC--CCcCHHHHHHHHHHHHHHHHhhhhccc-C-CceecCCcceEEecCCceeccc-cccc-----------
Confidence 7889987654 569999999999999999877632111 1 1333456889999999988764 1110
Q ss_pred ccCCccccccccccCCCCCccchHHHHHHHHHHHHh
Q 042123 743 FAGTCGYIAPELAYTMKITEKCDVYSFGVLMWEVIK 778 (849)
Q Consensus 743 ~~g~~~y~aPE~~~~~~~~~~~Dv~SlGvil~el~t 778 (849)
.....+.|||... ...+.+.=|||+|+++|.-+-
T Consensus 98 -~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALD 131 (229)
T 2yle_A 98 -AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALD 131 (229)
T ss_dssp ----------CCSS-SSSCHHHHHHHHHHHHHHHHT
T ss_pred -ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhh
Confidence 1122456888653 345688999999999999875
No 436
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=96.27 E-value=0.0089 Score=61.69 Aligned_cols=76 Identities=18% Similarity=0.157 Sum_probs=45.0
Q ss_pred CCCcCceecCCccceEEEEEecCCcEEEEEEecccCCCCch--hhHHHHHHHHHHhhce----eecCCeeEEEEEeccCC
Q 042123 589 DFDAKYCIGNGGHASVYRAELPSGEVVAVKKFHSLLPCDQT--VDQKEFLTEVEAFYGF----CSHARHSFLLYEFLERG 662 (849)
Q Consensus 589 ~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~--~~~~~~~~ei~~~~~~----~~~~~~~~lV~e~~~~g 662 (849)
+....+.+|.|..+.||+.+..+|+.|+||+.......... ..+...++.+..-.+. ....+..++||||++++
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~~~~lv~e~l~~~ 95 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWDDRTLAMEWVDER 95 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEETTEEEEECCCCC
T ss_pred CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEeccCceEEEEeeccc
Confidence 44556789999999999999999999999986543221111 1122222222211010 00112347899999886
Q ss_pred Ch
Q 042123 663 SL 664 (849)
Q Consensus 663 sL 664 (849)
..
T Consensus 96 ~~ 97 (288)
T 3f7w_A 96 PP 97 (288)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 437
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.16 E-value=0.025 Score=59.66 Aligned_cols=32 Identities=41% Similarity=0.344 Sum_probs=27.5
Q ss_pred CCeEecCCCCCCeeecCC----CcEEEeeecCCccc
Q 042123 702 PPIVHRDISSKNLLLDLE----YEAHVADFGIAKSL 733 (849)
Q Consensus 702 ~~ivH~dlk~~Nill~~~----~~~kl~DfG~a~~~ 733 (849)
+.++|||+.+.||+++.+ +.+.++||+.+...
T Consensus 183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 479999999999999875 67999999988653
No 438
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.09 E-value=0.041 Score=57.05 Aligned_cols=30 Identities=20% Similarity=0.219 Sum_probs=25.4
Q ss_pred CCeEecCCCCCCeeecCCCcEEEeeecCCcc
Q 042123 702 PPIVHRDISSKNLLLDLEYEAHVADFGIAKS 732 (849)
Q Consensus 702 ~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~ 732 (849)
+.++|+|+.+.||+ ..++.+.++||..+..
T Consensus 173 ~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~ 202 (301)
T 3dxq_A 173 LAACHCDPLCENFL-DTGERMWIVDWEYSGM 202 (301)
T ss_dssp CEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred ceeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence 35899999999999 5667889999998764
No 439
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=95.79 E-value=0.068 Score=56.08 Aligned_cols=29 Identities=21% Similarity=0.271 Sum_probs=25.0
Q ss_pred CCeEecCCCCCCeeecCCCcEEEeeecCCcc
Q 042123 702 PPIVHRDISSKNLLLDLEYEAHVADFGIAKS 732 (849)
Q Consensus 702 ~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~ 732 (849)
+.++|+|+++.||+++ + .+.++||+.+..
T Consensus 195 ~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 195 VLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred eeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 3688999999999998 4 899999987754
No 440
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=95.21 E-value=0.13 Score=54.22 Aligned_cols=31 Identities=23% Similarity=0.255 Sum_probs=27.4
Q ss_pred CCeEecCCCCCCeeecCCCcEEEeeecCCcc
Q 042123 702 PPIVHRDISSKNLLLDLEYEAHVADFGIAKS 732 (849)
Q Consensus 702 ~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~ 732 (849)
+.++|+|+.+.||+++.++.+.++||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 3799999999999999888899999987754
No 441
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=94.97 E-value=0.047 Score=59.71 Aligned_cols=30 Identities=13% Similarity=0.191 Sum_probs=23.4
Q ss_pred CceecCCccceEEEEEecC--------CcEEEEEEecc
Q 042123 593 KYCIGNGGHASVYRAELPS--------GEVVAVKKFHS 622 (849)
Q Consensus 593 ~~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~ 622 (849)
.+.|+.|....||++...+ ++.+++|+...
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~ 115 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFN 115 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECS
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCC
Confidence 4568889999999997653 57899998743
No 442
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=94.72 E-value=0.088 Score=56.25 Aligned_cols=135 Identities=18% Similarity=0.257 Sum_probs=70.1
Q ss_pred CceecCCccceEEEEEec--------CCcEEEEEEecccCCCCc-hhhHHHHHHHHH------HhhceeecCCeeEEEEE
Q 042123 593 KYCIGNGGHASVYRAELP--------SGEVVAVKKFHSLLPCDQ-TVDQKEFLTEVE------AFYGFCSHARHSFLLYE 657 (849)
Q Consensus 593 ~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~-~~~~~~~~~ei~------~~~~~~~~~~~~~lV~e 657 (849)
.+.+..|....+|+.... +++.+++|+......... ...+...++.+. ++++++.. .+|||
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e 130 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQ 130 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEE
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEE
Confidence 346777889999999775 247899998643211100 001111111111 13333322 28999
Q ss_pred eccCCChhhh-----------------hcccc--cccCCC--HHHHHHHHHHHHH-------------------HHHHH-
Q 042123 658 FLERGSLAAI-----------------LNTDA--AAQELG--WSQRMNVIKAVAH-------------------ALSYL- 696 (849)
Q Consensus 658 ~~~~gsL~~~-----------------l~~~~--~~~~l~--~~~~~~i~~~ia~-------------------~l~~L- 696 (849)
|++|..+..- +|... ...... |.++.++..++.. .++.|
T Consensus 131 ~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~ 210 (379)
T 3feg_A 131 YIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLR 210 (379)
T ss_dssp CCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHH
T ss_pred EecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHH
Confidence 9998654311 11111 011122 4556666554422 23333
Q ss_pred ---Hhc-CCCCeEecCCCCCCeeecCC----CcEEEeeecCCc
Q 042123 697 ---HHD-CFPPIVHRDISSKNLLLDLE----YEAHVADFGIAK 731 (849)
Q Consensus 697 ---H~~-~~~~ivH~dlk~~Nill~~~----~~~kl~DfG~a~ 731 (849)
... ....++|+|+.+.||+++.+ +.+.++||..+.
T Consensus 211 ~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 211 KLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 221 12368999999999999876 789999998775
No 443
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=94.30 E-value=0.18 Score=55.45 Aligned_cols=68 Identities=13% Similarity=0.063 Sum_probs=36.9
Q ss_pred CceecCCccceEEEEEecC-CcEEEEEEecccCCCC-chhhHHHHHHHHH------HhhceeecCCeeEEEEEeccCCCh
Q 042123 593 KYCIGNGGHASVYRAELPS-GEVVAVKKFHSLLPCD-QTVDQKEFLTEVE------AFYGFCSHARHSFLLYEFLERGSL 664 (849)
Q Consensus 593 ~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~-~~~~~~~~~~ei~------~~~~~~~~~~~~~lV~e~~~~gsL 664 (849)
.+.|+.|....+|++...+ +..+++|+........ ....+...++.+. .+++++. + .+||||++|.++
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~l 188 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEIINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYAL 188 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEEC
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCccC
Confidence 4578889999999998764 4788899875422111 1112222233322 1333331 2 359999998544
No 444
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=93.46 E-value=0.19 Score=53.67 Aligned_cols=28 Identities=18% Similarity=0.345 Sum_probs=23.8
Q ss_pred CeEecCCCCCCeeecCCCcEEEeeecCCc
Q 042123 703 PIVHRDISSKNLLLDLEYEAHVADFGIAK 731 (849)
Q Consensus 703 ~ivH~dlk~~Nill~~~~~~kl~DfG~a~ 731 (849)
.++|+|+.+.||+++.++ +.++||..+.
T Consensus 213 ~l~HgDl~~~Nil~~~~~-~~lID~e~a~ 240 (369)
T 3c5i_A 213 VFCHNDLQENNIINTNKC-LRLIDFEYSG 240 (369)
T ss_dssp EEECSCCCGGGEEECC-C-EEECCCTTCE
T ss_pred EEEeCCCCcccEEecCCc-EEEEEecCCC
Confidence 689999999999998655 8999998775
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=91.53 E-value=0.54 Score=50.36 Aligned_cols=29 Identities=24% Similarity=0.287 Sum_probs=25.9
Q ss_pred CeEecCCCCCCeeecCC------CcEEEeeecCCc
Q 042123 703 PIVHRDISSKNLLLDLE------YEAHVADFGIAK 731 (849)
Q Consensus 703 ~ivH~dlk~~Nill~~~------~~~kl~DfG~a~ 731 (849)
.++|+|+.+.||+++.+ +.+.++||..|.
T Consensus 245 v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred eEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 68899999999999887 789999998765
No 446
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=91.08 E-value=0.21 Score=34.09 Aligned_cols=28 Identities=21% Similarity=0.408 Sum_probs=12.6
Q ss_pred eehhhhhHH-HHHHHHHHHhhhhhcccCC
Q 042123 527 IVFPLLGAL-FVSIALISIFFILRKQKSD 554 (849)
Q Consensus 527 i~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 554 (849)
|..++++.+ ++++++++.|+++|||+.+
T Consensus 13 IA~gVVgGv~~~~ii~~~~~~~~RRr~~~ 41 (44)
T 2ks1_B 13 IATGMVGALLLLLVVALGIGLFMRRRHIV 41 (44)
T ss_dssp STHHHHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred EEeehhHHHHHHHHHHHHHHHHhhhhHhh
Confidence 444445433 3444444444455554443
No 447
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=89.76 E-value=1.9 Score=46.60 Aligned_cols=29 Identities=21% Similarity=0.400 Sum_probs=25.7
Q ss_pred CeEecCCCCCCeeecCCCcEEEeeecCCcc
Q 042123 703 PIVHRDISSKNLLLDLEYEAHVADFGIAKS 732 (849)
Q Consensus 703 ~ivH~dlk~~Nill~~~~~~kl~DfG~a~~ 732 (849)
.++|+|+.+.||+ +.++.+.++||..|..
T Consensus 263 ~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 263 VFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp EEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred eEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 6899999999999 7888999999988753
No 448
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=88.63 E-value=0.46 Score=51.28 Aligned_cols=30 Identities=23% Similarity=0.328 Sum_probs=24.7
Q ss_pred CeEecCCCCCCeee------cCCCcEEEeeecCCcc
Q 042123 703 PIVHRDISSKNLLL------DLEYEAHVADFGIAKS 732 (849)
Q Consensus 703 ~ivH~dlk~~Nill------~~~~~~kl~DfG~a~~ 732 (849)
.++|+|+.+.||++ +++..++++||-+|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 36799999999999 4457799999987753
No 449
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=88.60 E-value=0.3 Score=33.24 Aligned_cols=28 Identities=14% Similarity=0.326 Sum_probs=12.9
Q ss_pred eehhhhhH-HHHHHHHHHHhhhhhcccCC
Q 042123 527 IVFPLLGA-LFVSIALISIFFILRKQKSD 554 (849)
Q Consensus 527 i~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 554 (849)
|..++++. +.+++++.+.|+++|||+.+
T Consensus 12 IA~gVVgGv~~v~ii~~~~~~~~RRRr~~ 40 (44)
T 2l2t_A 12 IAAGVIGGLFILVIVGLTFAVYVRRKSIK 40 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred EEEeehHHHHHHHHHHHHHHHHhhhhhhh
Confidence 44445543 34444444444555554443
No 450
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=87.43 E-value=0.33 Score=32.90 Aligned_cols=28 Identities=14% Similarity=0.400 Sum_probs=13.4
Q ss_pred eehhhhhHHHHHHHHHHHhhhhhcccCC
Q 042123 527 IVFPLLGALFVSIALISIFFILRKQKSD 554 (849)
Q Consensus 527 i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 554 (849)
|+++++|++++++++++++++.|||+.+
T Consensus 14 Ia~~vVGvll~vi~~l~~~~~~RRR~~~ 41 (44)
T 2jwa_A 14 IISAVVGILLVVVLGVVFGILIKRRQQK 41 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCSC
T ss_pred hHHHHHHHHHHHHHHHHHHhheehhhhh
Confidence 4445555444444444444555555443
No 451
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=84.45 E-value=1.2 Score=42.57 Aligned_cols=83 Identities=8% Similarity=0.088 Sum_probs=63.0
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccCCCCCCeeeccCCccccccccc
Q 042123 676 ELGWSQRMNVIKAVAHALSYLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLKPDSSNWTEFAGTCGYIAPELA 755 (849)
Q Consensus 676 ~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~g~~~y~aPE~~ 755 (849)
.++...+++++.+|+....++++. +|--+.|+|++++.++.+++.-.|+...+. |.
T Consensus 77 ~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~NL~f~~~~~p~i~~RGik~~l~-----------------P~-- 132 (215)
T 4ann_A 77 SFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPDELFFTRDGLPIAKTRGLQNVVD-----------------PL-- 132 (215)
T ss_dssp GSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGGGEEECTTSCEEESCCEETTTBS-----------------CC--
T ss_pred hcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecceEEEcCCCCEEEEEccCccCCC-----------------CC--
Confidence 478899999999999999777766 899999999999999999998777644332 21
Q ss_pred cCCCCCccchHHHHHHHHHHHHhCCCCCCc
Q 042123 756 YTMKITEKCDVYSFGVLMWEVIKGKHPRDF 785 (849)
Q Consensus 756 ~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~ 785 (849)
..++..=.-.+=+++..+++++..|+.
T Consensus 133 ---~~~ee~fL~qyKAliiall~~K~~Fe~ 159 (215)
T 4ann_A 133 ---PVSEAEFLTRYKALVICAFNEKQSFDA 159 (215)
T ss_dssp ---CCCHHHHHHHHHHHHHHHHCTTCCHHH
T ss_pred ---CCCHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 112222334566788889999999863
No 452
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=77.88 E-value=2.8 Score=40.28 Aligned_cols=83 Identities=12% Similarity=0.145 Sum_probs=61.6
Q ss_pred CCCHHHHHHHHHHHHHHHH-HHHhcCCCCeEecCCCCCCeeecCCCcEEEeeecCCcccCCCCCCeeeccCCcccccccc
Q 042123 676 ELGWSQRMNVIKAVAHALS-YLHHDCFPPIVHRDISSKNLLLDLEYEAHVADFGIAKSLKPDSSNWTEFAGTCGYIAPEL 754 (849)
Q Consensus 676 ~l~~~~~~~i~~~ia~~l~-~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~g~~~y~aPE~ 754 (849)
.++..++++++.+|+.... +++.. +|--+.|+|++++.++.+++.-.|+-..+ +|..
T Consensus 81 ~~~~~eKlrll~nl~~L~~~~~~~r-----~tf~l~P~NL~f~~~~~p~i~hRGi~~~l-----------------pP~e 138 (219)
T 4ano_A 81 KTTLLSRIRAAIHLVSKVKHHSARR-----LIFIVCPENLMFNRALEPFFLHVGVKESL-----------------PPDE 138 (219)
T ss_dssp TSCHHHHHHHHHHHHHHHSSCCSSS-----EECCCCGGGEEECTTCCEEESCCEETTTB-----------------SSCS
T ss_pred hcCHHHHHHHHHHHHHHHHHhhhCc-----eeEEEeCceEEEeCCCcEEEEEcCCcccC-----------------CCCC
Confidence 4788999999999999888 77765 89999999999999999999877764433 2221
Q ss_pred ccCCCCCccchHHHHHHHHHHHHhCCCCCCc
Q 042123 755 AYTMKITEKCDVYSFGVLMWEVIKGKHPRDF 785 (849)
Q Consensus 755 ~~~~~~~~~~Dv~SlGvil~el~tg~~Pf~~ 785 (849)
.++..=.-.+=+++..++.++..|+.
T Consensus 139 -----~~ee~fl~qyKali~all~~K~~Fe~ 164 (219)
T 4ano_A 139 -----WDDERLLREVKATVLALTEGEYRFDE 164 (219)
T ss_dssp -----CCHHHHHHHHHHHHHHHTTCSSCHHH
T ss_pred -----CCHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 12212233556777888888888763
No 453
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=68.12 E-value=13 Score=30.63 Aligned_cols=15 Identities=33% Similarity=0.341 Sum_probs=5.7
Q ss_pred CcCCCCCCCCCEEEc
Q 042123 173 PRPFSNLTSVSTLRL 187 (849)
Q Consensus 173 ~~~~~~l~~L~~L~L 187 (849)
..+|.++.+|+.+.+
T Consensus 36 ~~aF~~C~~L~~i~~ 50 (100)
T 2lz0_A 36 DGMFSGCTALEKLIL 50 (100)
T ss_dssp TTSSTTCTTCCCEEE
T ss_pred HHHHhccCCccEEEE
Confidence 333333333333333
No 454
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=68.09 E-value=11 Score=31.19 Aligned_cols=46 Identities=15% Similarity=0.117 Sum_probs=25.2
Q ss_pred cccccCCcCCCCCCCCCEEEccCCCCcCcCcccccCCCCCCEEeccC
Q 042123 167 QLIGYIPRPFSNLTSVSTLRLSRNDLFGSIPDEIGKMRSLSVLDLNQ 213 (849)
Q Consensus 167 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 213 (849)
.++.|...+|.++.+|+.+.|-.+ ++.+...+|.++.+|+.+.+..
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 344555555666666666666543 3334445566666666665554
No 455
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=62.27 E-value=1.9 Score=27.61 Aligned_cols=25 Identities=16% Similarity=0.498 Sum_probs=12.0
Q ss_pred eehhhhhHHHHHHHHHHHhhhhhcc
Q 042123 527 IVFPLLGALFVSIALISIFFILRKQ 551 (849)
Q Consensus 527 i~~~~~~~~~~~~~~~~~~~~~~~~ 551 (849)
|+.++++.+++++++..+.+++|||
T Consensus 10 IaagVvglll~vii~l~~~~~iRRr 34 (35)
T 1iij_A 10 IIATVVGVLLFLILVVVVGILIKRR 34 (35)
T ss_dssp HHHHHHHHHHHHHHTTTTTHHHHHC
T ss_pred eHHHHHHHHHHHHHHHHhheEEeec
Confidence 4455555444444444444555554
No 456
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=58.67 E-value=5.1 Score=26.33 Aligned_cols=9 Identities=22% Similarity=0.242 Sum_probs=3.8
Q ss_pred HHHhhhhhc
Q 042123 542 ISIFFILRK 550 (849)
Q Consensus 542 ~~~~~~~~~ 550 (849)
.++||++||
T Consensus 29 ~l~~~~~rr 37 (38)
T 2k1k_A 29 GILVFRSRR 37 (38)
T ss_dssp HHHHHHHCC
T ss_pred HHHHHHeec
Confidence 334444443
No 457
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=51.59 E-value=12 Score=26.60 Aligned_cols=25 Identities=24% Similarity=0.530 Sum_probs=12.9
Q ss_pred CcceEEeehhhhhHHHHHHHHHHHh
Q 042123 521 GAKWFAIVFPLLGALFVSIALISIF 545 (849)
Q Consensus 521 ~~~~~~i~~~~~~~~~~~~~~~~~~ 545 (849)
-..|++++++++|.+++.+++.+.|
T Consensus 10 vp~wiIi~svl~GLllL~li~~~Lw 34 (54)
T 2knc_A 10 IPIWWVLVGVLGGLLLLTILVLAMW 34 (54)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456655555555555554444444
No 458
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=44.24 E-value=16 Score=26.01 Aligned_cols=24 Identities=13% Similarity=0.571 Sum_probs=12.1
Q ss_pred cceEEeehhhhhHHHHHHHHHHHh
Q 042123 522 AKWFAIVFPLLGALFVSIALISIF 545 (849)
Q Consensus 522 ~~~~~i~~~~~~~~~~~~~~~~~~ 545 (849)
..|++++++++|.+++.+++.+.|
T Consensus 8 p~WiIi~svl~GLLLL~Lii~~Lw 31 (54)
T 2l8s_A 8 PLWVILLSAFAGLLLLMLLILALW 31 (54)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHH
Confidence 455555555555555444444444
No 459
>2l6w_A Beta-type platelet-derived growth factor receptor; transmembrane helix, receptor tyrosine kinase, heptad repeat membrane protein; NMR {Homo sapiens}
Probab=39.56 E-value=8.9 Score=24.95 Aligned_cols=22 Identities=23% Similarity=0.442 Sum_probs=9.3
Q ss_pred hhHHHHHHHHHHHhhhhhcccC
Q 042123 532 LGALFVSIALISIFFILRKQKS 553 (849)
Q Consensus 532 ~~~~~~~~~~~~~~~~~~~~~~ 553 (849)
++.++++++..+++++.+++|.
T Consensus 15 lal~vi~iisLIiLi~~w~qKP 36 (39)
T 2l6w_A 15 LALVVLTIISLIILIMLWQKKP 36 (39)
Confidence 3333333344444444454443
No 460
>2k1a_A Integrin alpha-IIB; single-PASS transmembrane segment, alternative splicing, calcium, cell adhesion, cleavage on PAIR of basic residues; NMR {Homo sapiens} PDB: 2k9j_A
Probab=31.11 E-value=26 Score=23.53 Aligned_cols=24 Identities=25% Similarity=0.614 Sum_probs=11.5
Q ss_pred cceEEeehhhhhHHHHHHHHHHHh
Q 042123 522 AKWFAIVFPLLGALFVSIALISIF 545 (849)
Q Consensus 522 ~~~~~i~~~~~~~~~~~~~~~~~~ 545 (849)
..|+++++++.|.+++.+++.+.|
T Consensus 9 p~wiIi~s~l~GLllL~li~~~Lw 32 (42)
T 2k1a_A 9 PIWWVLVGVLGGLLLLTILVLAMW 32 (42)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHH
Confidence 455555555555444444443333
No 461
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=24.76 E-value=59 Score=22.09 Aligned_cols=37 Identities=14% Similarity=-0.022 Sum_probs=25.6
Q ss_pred CCCCcceEEeehhhhhHHHHHHHHHHHhhhhhcccCC
Q 042123 518 SNSGAKWFAIVFPLLGALFVSIALISIFFILRKQKSD 554 (849)
Q Consensus 518 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 554 (849)
+........++..++++++++++++.++-..+.++++
T Consensus 8 s~~~~IA~gVVgGv~~~~ii~~~~~~~~RRr~~~~kR 44 (44)
T 2ks1_B 8 PKIPSIATGMVGALLLLLVVALGIGLFMRRRHIVRKR 44 (44)
T ss_dssp SCSSSSTHHHHHHHHHHHHHHHHHHHHHHTTTCCSCC
T ss_pred CCcceEEeehhHHHHHHHHHHHHHHHHhhhhHhhccC
Confidence 4444566667777777777778777888777766653
No 462
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=24.40 E-value=60 Score=22.03 Aligned_cols=33 Identities=9% Similarity=-0.047 Sum_probs=20.4
Q ss_pred cceEEeehhhhhHHHHHHHHHHHhhhhhcccCC
Q 042123 522 AKWFAIVFPLLGALFVSIALISIFFILRKQKSD 554 (849)
Q Consensus 522 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 554 (849)
.....++..+++++++.++++.++-..++++++
T Consensus 11 aIA~gVVgGv~~v~ii~~~~~~~~RRRr~~~kr 43 (44)
T 2l2t_A 11 LIAAGVIGGLFILVIVGLTFAVYVRRKSIKKKR 43 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCC
T ss_pred eEEEeehHHHHHHHHHHHHHHHHhhhhhhhhcc
Confidence 345555566666666666666777666666554
Done!