BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042126
(369 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q91VY9|ZN622_MOUSE Zinc finger protein 622 OS=Mus musculus GN=Znf622 PE=2 SV=1
Length = 476
Score = 116 bits (291), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/245 (33%), Positives = 123/245 (50%), Gaps = 26/245 (10%)
Query: 134 EEDDDDGAFEEFDPAC------CFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGL 187
++D +D A EE P C C ++ + HM K H FFIPD+EYL D KGL
Sbjct: 231 DQDAEDAAAEESPPLGAIPITDCLFCSHHSSSLVKNVAHMTKVHSFFIPDIEYLSDLKGL 290
Query: 188 LTYLGLKVKRDFMCLYCNDRCHPFNSLEAVRKHMEAKRHCKMHFGDGDDEEEAELEEFYD 247
+ YLG KV +CL+CN++ F S EAV+ HM K HCK+ F DGD E +FYD
Sbjct: 291 IKYLGEKVGVGKICLWCNEKGKSFYSTEAVQAHMNDKSHCKL-FTDGD--AALEFADFYD 347
Query: 248 YSSSYMDEDGKQLISSSDMANTVEL----GGGSELIITRRTDKGTSTKTFGSREYLRYYR 303
+ SSY D Q + + +T ++ ELI+ S G R +RYY+
Sbjct: 348 FRSSYPDYKEGQDPAELEALSTDKILECDDETMELIL-------PSGARVGHRSLMRYYK 400
Query: 304 RK---PRP-SPANNVAITAALASRYKSMGLATVQTREHMVRMKVIKEMNRTGVEAMRTRV 359
++ PR + A N + +Y+++G T ++R + ++ + R + M ++
Sbjct: 401 QRFGLPRAVTVARNQKAVGRVLQQYRALGWMG-STGAALMRERDMQYVQRMKSKWM-LKI 458
Query: 360 GMKNN 364
GMKNN
Sbjct: 459 GMKNN 463
>sp|Q969S3|ZN622_HUMAN Zinc finger protein 622 OS=Homo sapiens GN=ZNF622 PE=1 SV=1
Length = 477
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/223 (34%), Positives = 115/223 (51%), Gaps = 20/223 (8%)
Query: 150 CFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCH 209
C C ++ + HM K H FFIPD+EYL D KGL+ YLG KV +CL+CN++
Sbjct: 254 CLFCSHHSSSLMKNVAHMTKDHSFFIPDIEYLSDIKGLIKYLGEKVGVGKICLWCNEKGK 313
Query: 210 PFNSLEAVRKHMEAKRHCKMHFGDGDDEEEAELEEFYDYSSSYMD-EDGKQLISSSDMAN 268
F S EAV+ HM K HCK+ F DGD E +FYD+ SSY D ++G+ + ++ +
Sbjct: 314 SFYSTEAVQAHMNDKSHCKL-FTDGD--AALEFADFYDFRSSYPDHKEGEDPNKAEELPS 370
Query: 269 TVEL---GGGSELIITRRTDKGTSTKTFGSREYLRYYRRKPRPSPANNVA----ITAALA 321
L ELI+ S G R +RYY+++ S A VA +
Sbjct: 371 EKNLEYDDETMELIL-------PSGARVGHRSLMRYYKQRFGLSRAVAVAKNRKAVGRVL 423
Query: 322 SRYKSMGLATVQTREHMVRMKVIKEMNRTGVEAMRTRVGMKNN 364
+Y+++G T T ++R + ++ + R + M + GMKNN
Sbjct: 424 QQYRALGW-TGSTGAALMRERDMQYVQRMKSKWM-LKTGMKNN 464
>sp|Q7TM96|ZN622_RAT Zinc finger protein 622 OS=Rattus norvegicus GN=Znf622 PE=2 SV=2
Length = 386
Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 63/105 (60%), Gaps = 3/105 (2%)
Query: 150 CFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCH 209
C C ++ + HM K H FFIPD+EYL D KGL+ YLG KV +CL+CN++
Sbjct: 247 CLFCSHHSSSLVKNVAHMTKVHSFFIPDIEYLSDLKGLIKYLGEKVGVGKICLWCNEKGK 306
Query: 210 PFNSLEAVRKHMEAKRHCKMHFGDGDDEEEAELEEFYDYSSSYMD 254
F S EAV+ HM K HCK+ F DGD E +FYD+ SSY D
Sbjct: 307 SFYSTEAVQAHMNDKSHCKL-FTDGD--AALEFADFYDFRSSYPD 348
Score = 32.0 bits (71), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 12/93 (12%)
Query: 1 VAGVPGVTEALFLAR---QAALAQEKNTNETPMTYSCGLCGKGYRSSKALAQHLNSRSHI 57
VA + VT F R Q A+A+E++ TY C +C K + + A HL SR H+
Sbjct: 36 VANMAPVTAEGFQERVRAQRAVAEEESKGTA--TY-CTVCSKKFATFNAYENHLKSRRHV 92
Query: 58 ---MRAAQGTSNEEK---EKVIIRSISLRDVNK 84
+A Q S + + EK + + + + VNK
Sbjct: 93 ELEKKAVQAVSRQVEMMNEKNLEKGLGVDSVNK 125
>sp|Q90Y35|ZN622_CHICK Zinc finger protein 622 OS=Gallus gallus GN=ZNF622 PE=2 SV=1
Length = 405
Score = 98.6 bits (244), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 69/129 (53%), Gaps = 8/129 (6%)
Query: 150 CFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCH 209
C C + + HM K H FFIPD+EYL D +GL+ YLG K+ +C++CN++
Sbjct: 246 CLFCSHHSRTLMKNVAHMTKVHSFFIPDIEYLVDLRGLIKYLGEKIGVGKICIWCNEKGK 305
Query: 210 PFNSLEAVRKHMEAKRHCKMHFGDGDDEEEAELEEFYDYSSSYMDEDGKQLISSSDMANT 269
F S EAV+ HM K HCK+ F DGD E +FYD+ SSY D Q DM
Sbjct: 306 SFYSTEAVQAHMNDKSHCKL-FTDGD--AALEFADFYDFRSSYPDHKEGQ-----DMEVP 357
Query: 270 VELGGGSEL 278
EL EL
Sbjct: 358 AELPSDREL 366
Score = 35.4 bits (80), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 12/93 (12%)
Query: 1 VAGVPGVTEALFLAR---QAALAQEKNTNETPMTYSCGLCGKGYRSSKALAQHLNSRSHI 57
VA +P VT F R Q A+A+E++ + TY C +C K + + A HL S+ H+
Sbjct: 36 VADMPPVTAENFQERVLAQRAVAEERD--KVTATY-CTVCSKRFSTFNAYENHLKSKKHL 92
Query: 58 ---MRAAQGTSNEEK---EKVIIRSISLRDVNK 84
+A Q S + K EK + + +++ V+K
Sbjct: 93 ELEKKAVQAVSKKVKILNEKNLEKGLAVESVDK 125
>sp|O59811|YJVF_SCHPO Zinc finger protein C550.15c OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=SPCC550.15c PE=1 SV=1
Length = 463
Score = 95.9 bits (237), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 124/285 (43%), Gaps = 33/285 (11%)
Query: 1 VAGVPGVTEALFLARQAALAQEKNTNETPMTY--SCGLCGKGYRSSKALAQHLNSRSHIM 58
VA +P ++ +F + ++ ++ + + +C +C K + S A + H+ S+ H
Sbjct: 37 VASLPPLSAEVFAGKILSIQKQNEEVQKKAEFYQNCEVCNKKFYSEGAYSSHMASKKHRD 96
Query: 59 RAAQGTSNEEKEKVI---IRSISLRDVNKPPPKREANNEESED----------------- 98
++ N +K+ SI+ ++ P ++ EE ED
Sbjct: 97 NLSKFQRNSRIKKLQSEDASSIASSTLSMGEPVVDSEIEEEEDLASQLTSRAISLSNLSL 156
Query: 99 ----SDDEWEEVGPDEVLVSEATNSLTNLNVGSPADDDMEEDDDDGAFEEFDPACCFMCD 154
S+ E+ +EA+ S +L P +++E + + + P C C
Sbjct: 157 HGRESEPSKTELATSIPQSNEASKS--HLFTQEPTPEEIEAELARRSSQRLSPRDCLFCA 214
Query: 155 LPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCHPFNSL 214
+ + C HM H +IP+ EYL D L YL K+ F CL CN F SL
Sbjct: 215 ASFSSFDTCKKHMKASHSLYIPEREYLVDEPSLFDYLAEKISIGFTCLTCN---REFKSL 271
Query: 215 EAVRKHMEAKRHCKMHFGDGDDEEEAELEEFYDYSSSYMDEDGKQ 259
EAVR HM+ K H + + D E+ EL +FYD+++SY D KQ
Sbjct: 272 EAVRAHMQQKGHTSIAYDTED--EQLELSDFYDFTTSYPDYAVKQ 314
>sp|P38344|REI1_YEAST Pre-60S factor REI1 OS=Saccharomyces cerevisiae (strain ATCC 204508
/ S288c) GN=REI1 PE=1 SV=3
Length = 393
Score = 82.0 bits (201), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 64/107 (59%), Gaps = 11/107 (10%)
Query: 150 CFMCDLPHDA----IENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCN 205
C C+ H+ +E + HM + HGF+IP+ +YL D GL+ Y+ K+ +C+ CN
Sbjct: 164 CLFCE--HNKHFKDVEENLEHMFRTHGFYIPEQKYLVDKIGLVKYMSEKIGLGNICIVCN 221
Query: 206 DRCHPFNSLEAVRKHMEAKRHCKMHFGDGDDEEEAELEEFYDYSSSY 252
+ +L AVR+HM AKRHCK+ + D E E+ EFYD++SSY
Sbjct: 222 ---YQGRTLTAVRQHMLAKRHCKIPYESED--ERLEISEFYDFTSSY 263
>sp|Q06709|REH1_YEAST Zinc finger protein REH1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=REH1 PE=1 SV=1
Length = 432
Score = 68.2 bits (165), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 105/250 (42%), Gaps = 48/250 (19%)
Query: 132 DMEEDDDDGAFEEFDPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYL 191
D+ + D E+ C C + +E + HM HG FIP+ YL D GLL +L
Sbjct: 170 DIADKPSDKENEKITITECIYCGKDNKEVERNVKHMFSEHGLFIPERSYLIDLNGLLEFL 229
Query: 192 GLKVKRDFMCLYCNDRCHPFNSLEAVRKHMEAKRHCKMHFGDGDDEEEAELEEFYDY--- 248
+ D CL CN + LE++R HM +KRHC++ + EE FYD+
Sbjct: 230 IKMIVIDHNCLCCN---FHGSGLESIRAHMASKRHCRLPY--ETKEERQLFAPFYDFTYD 284
Query: 249 ------------------SSSYM----DEDGK---QLISSSDMAN----TVELG-GGSEL 278
SS Y +EDG+ L+SS + N TV + G EL
Sbjct: 285 DHSISKNLQNDRAITSKLSSVYGAKNDEEDGEVDITLVSSENDINANYTTVSIDESGLEL 344
Query: 279 IITRRTDKGTSTKTFGSREYLRYYRRK--PRPSPANNVAITAALASRYKSMGLATVQTRE 336
+ + G R RYYR+ +P+P N T A R G+ Q ++
Sbjct: 345 TL-------PTGARLGHRAGQRYYRQNLPSQPNP-NESRRTITAADRRMVSGVTEKQYKK 396
Query: 337 HMVRMKVIKE 346
M +M+ +++
Sbjct: 397 GMKKMQQLEK 406
>sp|Q9NRM2|ZN277_HUMAN Zinc finger protein 277 OS=Homo sapiens GN=ZNF277 PE=2 SV=2
Length = 450
Score = 36.2 bits (82), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 43/103 (41%), Gaps = 9/103 (8%)
Query: 132 DMEEDDDDGAFEEFDPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYL 191
D +EDD E A C C+ + IE VHM H F D+ +K GL Y
Sbjct: 286 DHQEDDWSDWEEHPASAVCLFCEKQAETIEKLYVHMEDAHEF---DLLKIKSELGLNFYQ 342
Query: 192 GLK----VKRDFMCLYCNDRCH-PFNSLEAVRKHMEAKRHCKM 229
+K ++R C CH F S +R HME +H +
Sbjct: 343 QVKLVNFIRRQVHQCRCYG-CHVKFKSKADLRTHMEETKHTSL 384
>sp|P36508|ZNF76_HUMAN Zinc finger protein 76 OS=Homo sapiens GN=ZNF76 PE=2 SV=2
Length = 570
Score = 35.8 bits (81), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 13/64 (20%)
Query: 32 YSCGLCGKGYRSSKALAQHLNSRSHIMRAAQG--TSNEEKEKVIIRSISLRDVN----KP 85
Y+C CGK YR + LA H R+A G + EE E+ + L + P
Sbjct: 345 YTCSTCGKTYRQTSTLAMH-------KRSAHGELEATEESEQALYEQQQLEAASAAEESP 397
Query: 86 PPKR 89
PPKR
Sbjct: 398 PPKR 401
>sp|P26660|POLG_HCVJ6 Genome polyprotein OS=Hepatitis C virus genotype 2a (isolate HC-J6)
PE=1 SV=3
Length = 3033
Score = 35.8 bits (81), Expect = 0.56, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 74 IRSISLRDVNKPPPKREANNEESEDSDDEWEEVGPDEVLVSEATNSLTNLNV--GSPADD 131
++ ++++ +PPP ++ D+ D PDE+ +SE T S++++ G P D
Sbjct: 2344 LQQLAIKSFGQPPPSGDSGLSTGADAADSGSRTPPDELALSE-TGSISSMPPLEGEPGDP 2402
Query: 132 DMEED 136
D+E +
Sbjct: 2403 DLEPE 2407
>sp|Q8SUH6|ZA15_ENCCU Zinc finger C2H2 protein ECU10_0150 OS=Encephalitozoon cuniculi
(strain GB-M1) GN=ECU10_0150 PE=4 SV=1
Length = 388
Score = 35.4 bits (80), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Query: 32 YSCGLCGKGYRSSKALAQHLNSR--SHIMRAAQGTSNEEK 69
Y CG CGK + S K + H N++ + I R +G N +K
Sbjct: 299 YKCGFCGKAFESEKFIFNHFNNKHENEIRRIEKGIENFKK 338
>sp|Q28889|KIT_FELCA Mast/stem cell growth factor receptor Kit OS=Felis catus GN=KIT
PE=2 SV=1
Length = 978
Score = 35.4 bits (80), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 15/75 (20%)
Query: 146 DPACCFMCDLP------HDAIENCMV--------HMHKCHGFFIP-DVEYLKDPKGLLTY 190
DPA F+ DLP HD + C + + C G +P D+ ++ DPK +T
Sbjct: 113 DPAKLFLVDLPLYGKEDHDTLVRCPLTDPEVTNYSLRGCEGKPLPKDLTFVTDPKAGITI 172
Query: 191 LGLKVKRDFMCLYCN 205
+K + +CL+C+
Sbjct: 173 RNVKREYHRLCLHCS 187
>sp|Q9UL36|ZN236_HUMAN Zinc finger protein 236 OS=Homo sapiens GN=ZNF236 PE=2 SV=2
Length = 1845
Score = 34.7 bits (78), Expect = 1.1, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 9 EALFLARQAALAQEKNTNETPMTYSCGLCGKGYRSSKALAQHLNSRS 55
E L L Q + E N +++ +Y C C KG++ S L QH+ S +
Sbjct: 944 EELDLQAQGSQFLEDNEDQSRRSYRCDYCNKGFKKSSHLKQHVRSHT 990
>sp|Q9LHS9|RBE_ARATH Probable transcriptional regulator RABBIT EARS OS=Arabidopsis
thaliana GN=RBE PE=2 SV=2
Length = 226
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 18/24 (75%)
Query: 29 PMTYSCGLCGKGYRSSKALAQHLN 52
P +YSC CG+ ++S++AL H+N
Sbjct: 52 PRSYSCSFCGREFKSAQALGGHMN 75
>sp|Q4V8A8|ZFP90_RAT Zinc finger protein 90 OS=Rattus norvegicus GN=Zfp90 PE=2 SV=1
Length = 633
Score = 33.9 bits (76), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 17 AALAQEKNTNETPMTYSCGLCGKGYRSSKALAQH 50
++L Q +N + Y C LCGK ++ S +L QH
Sbjct: 292 SSLGQHENAHTGEKPYQCSLCGKAFQRSSSLVQH 325
Score = 33.9 bits (76), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 13 LARQAALAQEKNTNETPMTYSCGLCGKGYRSSKALAQH 50
R ++L Q + + Y C LCG+ +R S +L QH
Sbjct: 316 FQRSSSLVQHQRIHTGEKPYRCNLCGRSFRHSTSLTQH 353
Score = 33.5 bits (75), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 12 FLAR-QAALAQEKNTNETPMTYSCGLCGKGYRSSKALAQHLNSRS 55
FL R Q Q +T E P + C +CGK +R S +L QH N+ +
Sbjct: 260 FLWRTQLTEHQRIHTGEKP--FECNVCGKAFRHSSSLGQHENAHT 302
>sp|A1VN98|DNLJ_POLNA DNA ligase OS=Polaromonas naphthalenivorans (strain CJ2) GN=ligA
PE=3 SV=1
Length = 707
Score = 33.9 bits (76), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 1/95 (1%)
Query: 17 AALAQEKNTNETPMTYSCGLCGKGYRSSKALAQHLNSRSHIMRAAQGTSNEEKEKVIIRS 76
AAL + K T + G+ G ++KALA+H IM A++ E + I +
Sbjct: 528 AALEKSKQTTLPRFVFGLGIRHVGEATAKALARHFGQLDSIMDASEEQLLEVADVGPIVA 587
Query: 77 ISLRDVNKPPPKREANNEESEDSDDEWEEVGPDEV 111
S+R + P RE E+ WEE P V
Sbjct: 588 KSIRTFFEQPHNREV-VEQLRACGVTWEEGAPAAV 621
>sp|Q8TF47|ZFP90_HUMAN Zinc finger protein 90 homolog OS=Homo sapiens GN=ZFP90 PE=2 SV=2
Length = 636
Score = 33.9 bits (76), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 17 AALAQEKNTNETPMTYSCGLCGKGYRSSKALAQH 50
++L Q +N + Y C LCGK ++ S +L QH
Sbjct: 295 SSLGQHENAHTGEKPYQCSLCGKAFQRSSSLVQH 328
Score = 32.3 bits (72), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Query: 9 EALFLARQAALAQEKNTNETPMTYSCGLCGKGYRSSKALAQHLNSRS 55
+ Q Q +T E P + C +CGK +R S +L QH N+ +
Sbjct: 261 KTFLWKTQLTEHQRIHTGEKP--FECNVCGKAFRHSSSLGQHENAHT 305
Score = 32.0 bits (71), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 13 LARQAALAQEKNTNETPMTYSCGLCGKGYRSSKALAQH 50
R ++L Q + + Y C LCG+ +R +L QH
Sbjct: 319 FQRSSSLVQHQRIHTGEKPYRCNLCGRSFRHGTSLTQH 356
>sp|Q6DIJ4|UBP10_XENTR Ubiquitin carboxyl-terminal hydrolase 10 OS=Xenopus tropicalis
GN=usp10 PE=2 SV=1
Length = 805
Score = 33.9 bits (76), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 19/29 (65%), Gaps = 3/29 (10%)
Query: 83 NKPPP---KREANNEESEDSDDEWEEVGP 108
N P P K E N +E E SD+EWE+VGP
Sbjct: 564 NGPDPVSEKEEINKDEQEGSDEEWEQVGP 592
>sp|Q9C8N5|STOP1_ARATH Protein SENSITIVE TO PROTON RHIZOTOXICITY 1 OS=Arabidopsis thaliana
GN=STOP1 PE=2 SV=1
Length = 499
Score = 33.9 bits (76), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 8/68 (11%)
Query: 5 PGVTEALFLARQAALAQEKNTNETPMTYSCGLCGKGYRSSKALAQHLNSRSHIMRAAQGT 64
PG E L L ++ LA P T+ C +CGKG++ L H+ + A
Sbjct: 225 PGSYEILQLEKEEILA--------PHTHFCTICGKGFKRDANLRMHMRGHGDEYKTAAAL 276
Query: 65 SNEEKEKV 72
+ KE V
Sbjct: 277 AKPNKESV 284
>sp|Q61967|ZFP90_MOUSE Zinc finger protein 90 OS=Mus musculus GN=Zfp90 PE=2 SV=1
Length = 636
Score = 33.9 bits (76), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 17 AALAQEKNTNETPMTYSCGLCGKGYRSSKALAQH 50
++L Q +N + Y C LCGK ++ S +L QH
Sbjct: 291 SSLGQHENAHTGEKPYQCSLCGKAFQRSSSLVQH 324
Score = 33.5 bits (75), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 13 LARQAALAQEKNTNETPMTYSCGLCGKGYRSSKALAQH 50
R ++L Q + + Y C LCG+ +R S +L QH
Sbjct: 315 FQRSSSLVQHQRIHTGEKPYRCNLCGRSFRHSTSLTQH 352
Score = 33.1 bits (74), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 12 FLAR-QAALAQEKNTNETPMTYSCGLCGKGYRSSKALAQHLNSRS 55
FL R Q Q +T E P + C +CGK +R S +L QH N+ +
Sbjct: 259 FLWRTQLTEHQRIHTGEKP--FECNVCGKAFRHSSSLGQHENAHT 301
>sp|Q6P280|ZN529_HUMAN Zinc finger protein 529 OS=Homo sapiens GN=ZNF529 PE=2 SV=1
Length = 530
Score = 33.5 bits (75), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 12 FLARQAALAQEKNTNETPMTYSCGLCGKGYRSSKALAQH 50
F +AL Q + + Y C +CGK +R S AL +H
Sbjct: 425 FFRLTSALIQHQRIHSGEKPYECKVCGKAFRHSSALTEH 463
>sp|Q8CCE9|E4F1_MOUSE Transcription factor E4F1 OS=Mus musculus GN=E4f1 PE=1 SV=2
Length = 783
Score = 33.5 bits (75), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Query: 23 KNTNETPMTYSCGLCGKGYRSSKALAQHLNS 53
++T+E P Y C CGK +R S AL +HL S
Sbjct: 242 RHTDERP--YKCAKCGKSFRESGALTRHLKS 270
>sp|Q2NL57|UB10A_XENLA Ubiquitin carboxyl-terminal hydrolase 10-A OS=Xenopus laevis
GN=usp10-a PE=2 SV=1
Length = 791
Score = 33.5 bits (75), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
Query: 83 NKPPP---KREANNEESEDSDDEWEEVGP 108
N P P E N EE E SD+EWE+VGP
Sbjct: 550 NGPDPVFATEEVNKEEQEGSDEEWEQVGP 578
>sp|Q66K89|E4F1_HUMAN Transcription factor E4F1 OS=Homo sapiens GN=E4F1 PE=1 SV=2
Length = 784
Score = 33.5 bits (75), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Query: 23 KNTNETPMTYSCGLCGKGYRSSKALAQHLNS 53
++T+E P Y C CGK +R S AL +HL S
Sbjct: 241 RHTDERP--YKCSKCGKSFRESGALTRHLKS 269
>sp|Q7ZXR7|UB10B_XENLA Ubiquitin carboxyl-terminal hydrolase 10-B OS=Xenopus laevis
GN=usp10-b PE=2 SV=1
Length = 805
Score = 33.5 bits (75), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 13/19 (68%), Positives = 15/19 (78%)
Query: 90 EANNEESEDSDDEWEEVGP 108
E N EE E SD+EWE+VGP
Sbjct: 574 EVNKEEQEGSDEEWEQVGP 592
>sp|Q9UDV7|ZN282_HUMAN Zinc finger protein 282 OS=Homo sapiens GN=ZNF282 PE=2 SV=3
Length = 671
Score = 33.1 bits (74), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Query: 12 FLARQAALAQEK-NTNETPMTYSCGLCGKGYRSSKALAQHLNSRS 55
F+ +Q L ++ +T E P Y+CG CGK +R ++L HL S
Sbjct: 611 FIRKQNLLKHQRIHTGERP--YTCGECGKSFRYKESLKDHLRVHS 653
>sp|P53863|JJJ1_YEAST J protein JJJ1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=JJJ1 PE=1 SV=1
Length = 590
Score = 33.1 bits (74), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 30 MTYSCGLCGKGYRSSKALAQHLNSRSH 56
+ Y C +C K ++S K L H+N++ H
Sbjct: 336 LIYECFICNKTFKSEKQLKNHINTKLH 362
>sp|P51786|ZN157_HUMAN Zinc finger protein 157 OS=Homo sapiens GN=ZNF157 PE=2 SV=2
Length = 506
Score = 33.1 bits (74), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 16 QAALAQEKNTNETPMTYSCGLCGKGYRSSKALAQH 50
+ +L Q T+ Y CG CGK +R+ K+L QH
Sbjct: 286 KISLTQHHRTHTGEKPYECGECGKNFRAKKSLNQH 320
>sp|Q8BMU0|ZNF76_MOUSE Zinc finger protein 76 OS=Mus musculus GN=Znf76 PE=2 SV=1
Length = 568
Score = 33.1 bits (74), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 13/63 (20%)
Query: 32 YSCGLCGKGYRSSKALAQHLNSRSHIMRAAQG--TSNEEKEKVIIRSISLRDVN----KP 85
Y+C CGK YR + LA H R+A G + EE E+ + L + P
Sbjct: 345 YTCSSCGKTYRQTSTLAMH-------KRSAHGELEATEESEQALYEQQQLEAASAAEESP 397
Query: 86 PPK 88
PPK
Sbjct: 398 PPK 400
>sp|P17098|ZNF8_HUMAN Zinc finger protein 8 OS=Homo sapiens GN=ZNF8 PE=1 SV=2
Length = 575
Score = 33.1 bits (74), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
Query: 24 NTNETPMTYSCGLCGKGYRSSKALAQH 50
+T E P Y C CGKG+R S +LAQH
Sbjct: 391 HTEERP--YECNHCGKGFRHSSSLAQH 415
>sp|Q07230|ZSCA2_MOUSE Zinc finger and SCAN domain-containing protein 2 OS=Mus musculus
GN=Zscan2 PE=1 SV=1
Length = 614
Score = 32.7 bits (73), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 13 LARQAALAQEKNTNETPMTYSCGLCGKGYRSSKALAQHLNSRS 55
+R + LA + T+ Y CGLCGK + S +L H + +
Sbjct: 427 FSRSSNLATHRRTHLVEKPYKCGLCGKSFSQSSSLIAHQGTHT 469
>sp|Q0VCB0|ZN350_BOVIN Zinc finger protein 350 OS=Bos taurus GN=ZNF350 PE=2 SV=1
Length = 509
Score = 32.7 bits (73), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 16 QAALAQEKNTNETPMTYSCGLCGKGYRSSKALAQHLNSRSHIMRAAQGTSNEEKEKVIIR 75
Q + Q +T E P Y C CGK +R L +HL ++H ++ + + V+++
Sbjct: 376 QLVIHQRIHTGEKP--YRCSKCGKSFRGKSVLNKHL--KTHSVKKLPPSVKSPQSSVVLQ 431
Query: 76 SISLRDV--NKPP 86
+L V + PP
Sbjct: 432 EKNLNTVTMHLPP 444
>sp|Q9YLS4|POLG_AEVCA Genome polyprotein OS=Avian encephalomyelitis virus (strain Calnek
vaccine) PE=2 SV=1
Length = 2134
Score = 32.3 bits (72), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 37/80 (46%)
Query: 117 TNSLTNLNVGSPADDDMEEDDDDGAFEEFDPACCFMCDLPHDAIENCMVHMHKCHGFFIP 176
T+S T +N DD++ E+ +F+E + A C C + I +C K G ++
Sbjct: 738 TSSKTVMNTYWLDDDELVEESSHSSFDEIEEAQCSKCKMDLGDIVSCSGEKAKHFGVYVG 797
Query: 177 DVEYLKDPKGLLTYLGLKVK 196
D DP+G T +K K
Sbjct: 798 DGVVHVDPEGNATNWFMKRK 817
>sp|Q9BRP0|OVOL2_HUMAN Transcription factor Ovo-like 2 OS=Homo sapiens GN=OVOL2 PE=1 SV=1
Length = 275
Score = 32.3 bits (72), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 30 MTYSCGLCGKGYRSSKALAQHLNSRSHIMR 59
+ +SC LCGKG+R + L +HL + + R
Sbjct: 117 VVHSCDLCGKGFRLQRMLNRHLKCHNQVKR 146
>sp|D2HQI1|ZSCA4_AILME Zinc finger and SCAN domain-containing protein 4 OS=Ailuropoda
melanoleuca GN=ZSCAN4 PE=3 SV=1
Length = 430
Score = 32.3 bits (72), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Query: 9 EALFLARQAALAQEK-NTNETPMTYSCGLCGKGYRSSKALAQHLNSRSHIMRAAQGTSN 66
E F + LA E+ +T E P Y C LC + YR S +HL R+H A +G S+
Sbjct: 371 EKSFSHKTNLLAHERIHTGEKP--YECSLCHRSYRQSSTYHRHL--RNHQKSAFRGVSS 425
>sp|Q8N9F8|ZN454_HUMAN Zinc finger protein 454 OS=Homo sapiens GN=ZNF454 PE=2 SV=2
Length = 522
Score = 32.3 bits (72), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
Query: 24 NTNETPMTYSCGLCGKGYRSSKALAQH 50
+T E P Y CGLC K +R ALAQH
Sbjct: 406 HTGEKP--YRCGLCEKAFRDQSALAQH 430
>sp|Q08DG8|ZN135_BOVIN Zinc finger protein 135 OS=Bos taurus GN=ZNF135 PE=2 SV=1
Length = 657
Score = 32.3 bits (72), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 13 LARQAALAQEKNTNETPMTYSCGLCGKGYRSSKALAQHLNSRSHI 57
+ ++L+Q + T+ Y+C CGK +R S L QH R+H
Sbjct: 446 FSHSSSLSQHERTHTGEKPYACSQCGKAFRQSTHLTQH--QRTHT 488
>sp|O60281|ZN292_HUMAN Zinc finger protein 292 OS=Homo sapiens GN=ZNF292 PE=1 SV=3
Length = 2723
Score = 32.0 bits (71), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 88/202 (43%), Gaps = 31/202 (15%)
Query: 32 YSCGLCGKGYRSSKALAQHLNSRSHIMRAAQGTSNEEKEKVIIRSISLRDVNKPPPKREA 91
YSC +C K + S + H+ H+ +++ KE++ LR + + PPK
Sbjct: 569 YSCPICAKNFNSKETFVPHVT--LHVKQSS-------KERLAAMK-PLRRLGR-PPKITT 617
Query: 92 NNEESEDSDDEWEEVGPDEVLVSEATNSLTNLNVGSPADDDMEEDDDDGAFEEFDPACC- 150
NE + + +E P + NSL + + D+D +D++D + ++P
Sbjct: 618 TNENQKTNTVAKQEQRPIK------KNSLYSTDFIVFNDNDGSDDENDDKDKSYEPEVIP 671
Query: 151 FMCDLPHDAIENCMVHMHKCHGF-----FIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCN 205
+P + NC V K GF I V+ KD + +L ++ K+ +C YC
Sbjct: 672 VQKPVPVNEF-NCPVTFCK-KGFKYFKNLIAHVKGHKDNEDAKRFLEMQSKK-VICQYC- 727
Query: 206 DRCHPFNSLEAVRKHMEAKRHC 227
R H F S+ + H++ HC
Sbjct: 728 -RRH-FVSVTHLNDHLQM--HC 745
>sp|P52742|ZN135_HUMAN Zinc finger protein 135 OS=Homo sapiens GN=ZNF135 PE=2 SV=3
Length = 658
Score = 32.0 bits (71), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 13 LARQAALAQEKNTNETPMTYSCGLCGKGYRSSKALAQH 50
+ ++L+Q + T+ Y C CGK +R S L QH
Sbjct: 447 FSHSSSLSQHERTHTGEKPYECSQCGKAFRQSTHLTQH 484
>sp|Q6R325|POLG_AEVVR Genome polyprotein OS=Avian encephalomyelitis virus (strain Van
Reokel) PE=3 SV=1
Length = 2134
Score = 32.0 bits (71), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 37/80 (46%)
Query: 117 TNSLTNLNVGSPADDDMEEDDDDGAFEEFDPACCFMCDLPHDAIENCMVHMHKCHGFFIP 176
T+S T +N DD++ E+ +F+E + A C C + I +C K G ++
Sbjct: 738 TSSKTVMNTYWLDDDELVEESSHFSFDEIEEAQCSKCKIDLGDIVSCSGEKAKHFGVYVG 797
Query: 177 DVEYLKDPKGLLTYLGLKVK 196
D DP+G T +K K
Sbjct: 798 DGVVHVDPEGNATSWFMKRK 817
>sp|Q96LX8|ZN597_HUMAN Zinc finger protein 597 OS=Homo sapiens GN=ZNF597 PE=2 SV=1
Length = 424
Score = 32.0 bits (71), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 23/41 (56%)
Query: 15 RQAALAQEKNTNETPMTYSCGLCGKGYRSSKALAQHLNSRS 55
+ + L++ N++ Y+C +CG+G+ LAQH S S
Sbjct: 223 QHSHLSRHMNSHVKEKPYTCSICGRGFMWLPGLAQHQKSHS 263
>sp|Q8BRH4|MLL3_MOUSE Histone-lysine N-methyltransferase MLL3 OS=Mus musculus GN=Mll3
PE=2 SV=2
Length = 4903
Score = 32.0 bits (71), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 11/83 (13%)
Query: 139 DGAFEEFDPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRD 198
D +++ D C F H ++ M+H + C + +L+ K L ++K D
Sbjct: 456 DTCYQQQDNLCPFCGKCYHPELQKDMLHCNMCKRWV-----HLECDKPTDQELDSQLKED 510
Query: 199 FMCLYCN------DRCHPFNSLE 215
++C+YC D HP N +E
Sbjct: 511 YICMYCKHLGAEIDPLHPGNEVE 533
>sp|Q5RCD9|ZSCA2_PONAB Zinc finger and SCAN domain-containing protein 2 OS=Pongo abelii
GN=ZSCAN2 PE=2 SV=1
Length = 645
Score = 31.6 bits (70), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 13 LARQAALAQEKNTNETPMTYSCGLCGKGYRSSKALAQH 50
+R + LA + T+ Y CG+CGK + S +L H
Sbjct: 458 FSRSSNLATHRRTHMVEKPYKCGVCGKSFSQSSSLIAH 495
>sp|Q7Z7L9|ZSCA2_HUMAN Zinc finger and SCAN domain-containing protein 2 OS=Homo sapiens
GN=ZSCAN2 PE=2 SV=2
Length = 614
Score = 31.6 bits (70), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 13 LARQAALAQEKNTNETPMTYSCGLCGKGYRSSKALAQH 50
+R + LA + T+ Y CG+CGK + S +L H
Sbjct: 427 FSRSSNLATHRRTHMVEKPYKCGVCGKSFSQSSSLIAH 464
>sp|Q96MX3|ZNF48_HUMAN Zinc finger protein 48 OS=Homo sapiens GN=ZNF48 PE=1 SV=2
Length = 618
Score = 31.6 bits (70), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 21 QEKNTNETPMTYSCGLCGKGYRSSKALAQHLNSRS 55
Q +T E P Y CG+CGKG+ S A +H + S
Sbjct: 131 QRTHTGEKP--YKCGVCGKGFGDSSARIKHQRTHS 163
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.131 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 142,400,345
Number of Sequences: 539616
Number of extensions: 6301297
Number of successful extensions: 39955
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 104
Number of HSP's successfully gapped in prelim test: 260
Number of HSP's that attempted gapping in prelim test: 38056
Number of HSP's gapped (non-prelim): 1945
length of query: 369
length of database: 191,569,459
effective HSP length: 119
effective length of query: 250
effective length of database: 127,355,155
effective search space: 31838788750
effective search space used: 31838788750
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)