BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042131
(201 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P55195|PUR6_VIGAC Phosphoribosylaminoimidazole carboxylase, chloroplastic (Fragment)
OS=Vigna aconitifolia GN=PURKE PE=2 SV=1
Length = 557
Score = 177 bits (450), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 87/123 (70%), Positives = 100/123 (81%), Gaps = 2/123 (1%)
Query: 76 CGVLTVEIEHVDVAIMEKLEQQGVDCQPKASTIRIIQDKYIQKVHFSPHGIPLPEFMEVN 135
CGVLTVEIEHVDV +EKLE+QGVDCQPKAST+RIIQDKY QKV P IPLPEFM+++
Sbjct: 66 CGVLTVEIEHVDVDTLEKLEKQGVDCQPKASTVRIIQDKYQQKVALLPAWIPLPEFMKID 125
Query: 136 DLESARRAGKQFGYPLMVKSKSLAYDGRGNAVAKSEEELSSAITALGGFDRSLYIEKWAP 195
DL++ + + M+KS+ LAYDGRGN VAKSEEELSSA+ ALGGFDR LY EKWAP
Sbjct: 126 DLKAKKWDSLDIHF--MIKSRRLAYDGRGNFVAKSEEELSSAVDALGGFDRGLYAEKWAP 183
Query: 196 FVK 198
FVK
Sbjct: 184 FVK 186
>sp|P15567|PUR6_SCHPO Phosphoribosylaminoimidazole carboxylase OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=ade6 PE=3 SV=1
Length = 552
Score = 122 bits (307), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/150 (44%), Positives = 92/150 (61%), Gaps = 8/150 (5%)
Query: 52 SPPPLLDSARPEVH-NFELPVAVV----ACGVLTVEIEHVDVAIMEKLEQQGVDCQPKAS 106
SP +D R + +F P A+V C +LT EIEH++ + + + V +P +
Sbjct: 38 SPAKQIDGGREHIDASFTDPDAIVELSKKCTLLTTEIEHINTDALAAV-TKSVAVEPSPA 96
Query: 107 TIRIIQDKYIQKVHFSPHGIPLPEFMEVNDLESARRAGKQFGYPLMVKSKSLAYDGRGNA 166
T+R IQDKY+QK H I LPEF + D ES +AG++FGYP ++KSK+LAYDGRGN
Sbjct: 97 TLRCIQDKYLQKQHLQVFKIALPEFCDAPDQESVEKAGQEFGYPFVLKSKTLAYDGRGNY 156
Query: 167 VAKSEEELSSAITALGGFDRSLYIEKWAPF 196
V E+ +AI ALG DR LY+EK+ PF
Sbjct: 157 VVHQPSEIPTAIKALG--DRPLYVEKFVPF 184
>sp|P50504|PUR6_SCHOC Phosphoribosylaminoimidazole carboxylase OS=Schwanniomyces
occidentalis GN=ADE2 PE=3 SV=1
Length = 557
Score = 119 bits (299), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/126 (49%), Positives = 84/126 (66%), Gaps = 5/126 (3%)
Query: 76 CGVLTVEIEHVDVAIMEKLEQQ-GVDCQPKASTIRIIQDKYIQKVHFSPHGIPLPEFMEV 134
C +LTVEIEHVDV ++ ++++ GV+ P TI++IQDKY+QK H HGI + E + V
Sbjct: 65 CDILTVEIEHVDVEALKYVKEKFGVEIYPLPDTIKLIQDKYLQKEHLIQHGISVTESVAV 124
Query: 135 --NDLESARRAGKQFGYPLMVKSKSLAYDGRGNAVAKSEEELSSAITALGGFDRSLYIEK 192
ND +S G +F YP M+KS++LAYDGRGN V K++E + A+ L DR LY EK
Sbjct: 125 PSNDEQSLIEIGNKFNYPFMLKSRTLAYDGRGNYVVKTKESIPEALEFLK--DRPLYAEK 182
Query: 193 WAPFVK 198
W PF K
Sbjct: 183 WCPFNK 188
>sp|O74197|PUR6_CANGA Phosphoribosylaminoimidazole carboxylase OS=Candida glabrata
(strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 /
NRRL Y-65) GN=ADE2 PE=3 SV=2
Length = 570
Score = 110 bits (275), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 58/126 (46%), Positives = 80/126 (63%), Gaps = 5/126 (3%)
Query: 76 CGVLTVEIEHVDVAIMEKLEQQ--GVDCQPKASTIRIIQDKYIQKVHFSPHGIPL-PEFM 132
C V+TVEIEHVDV ++++++Q ++ P TI +IQDKY+QK H + IP+ P
Sbjct: 66 CDVMTVEIEHVDVNALKEVQKQFPKLEIYPTPETIGLIQDKYVQKQHLVKNRIPVVPSIT 125
Query: 133 EVNDLESARRAGKQFGYPLMVKSKSLAYDGRGNAVAKSEEELSSAITALGGFDRSLYIEK 192
N ES + G GYP ++KS++LAYDGRGN V KSEE++ + L +R LY EK
Sbjct: 126 VENSKESLIKTGSSLGYPFVLKSRTLAYDGRGNFVVKSEEDIEKGLEFLA--NRPLYAEK 183
Query: 193 WAPFVK 198
WA F K
Sbjct: 184 WASFKK 189
>sp|Q92210|PUR6_CANAL Phosphoribosylaminoimidazole carboxylase OS=Candida albicans
(strain SC5314 / ATCC MYA-2876) GN=ADE2 PE=3 SV=2
Length = 568
Score = 109 bits (273), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/125 (47%), Positives = 79/125 (63%), Gaps = 6/125 (4%)
Query: 78 VLTVEIEHVDVAIMEKLEQQ--GVDCQPKASTIRIIQDKYIQKVHFSPHGIPLPE--FME 133
VLTVEIEHVDV + K++++ V+ P TIR+IQDKY+QK H H + + E +E
Sbjct: 68 VLTVEIEHVDVDALIKVQEKFPKVEIYPLPETIRLIQDKYLQKNHLIKHDVAVTESVAVE 127
Query: 134 VNDLESARRAGKQFGYPLMVKSKSLAYDGRGNAVAKSEEELSSAITALGGFDRSLYIEKW 193
N ++ G++FGYP M+KS++LAYDGRGN V K + A+ L DR LY EKW
Sbjct: 128 TNTVDDLLHIGEKFGYPYMLKSRTLAYDGRGNFVVKDKSYCEKALEFLK--DRPLYAEKW 185
Query: 194 APFVK 198
PF K
Sbjct: 186 CPFTK 190
>sp|P0C017|PUR6_CRYNH Phosphoribosylaminoimidazole carboxylase OS=Cryptococcus neoformans
var. grubii serotype A (strain H99 / ATCC 208821 / CBS
10515 / FGSC 9487) GN=ADE2 PE=2 SV=1
Length = 582
Score = 108 bits (269), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 103/175 (58%), Gaps = 21/175 (12%)
Query: 38 LWELDSGAI--AARGISPPPLLD------SARPEVHNFELPVAVVACGVLTVEIEHVDVA 89
L LDSG+ A + + PPP ++ P + AC +LTVEIEHV+
Sbjct: 30 LLILDSGSFTPAKQTLLPPPSHSHPDGPFTSEPHIRKL-----ASACDILTVEIEHVNAD 84
Query: 90 IMEKLEQQGV-DCQPKASTIRIIQDKYIQKVHFSPHGIPLPEFMEV--NDLESARRA-GK 145
++E +E++G+ + QP TIR+IQ+KY QK + + G+ + F E+ N E +A
Sbjct: 85 VLEAVEKEGLCEVQPSPKTIRLIQNKYDQKKYLAEKGVAVAPFEELPANPTEEDFKAIAG 144
Query: 146 QFGYPLMVKSKSLAYDGRGNAVAK--SEEELSSAITALGGFDRSLYIEKWAPFVK 198
+ G PLM+K+K+LAYDGRGN+ K S E++ +++ LG DR LY E WAPFVK
Sbjct: 145 RLGLPLMLKAKTLAYDGRGNSPLKSTSSEDIQASLKFLG--DRPLYAEGWAPFVK 197
>sp|P21264|PUR6_YEAST Phosphoribosylaminoimidazole carboxylase OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ADE2 PE=1
SV=1
Length = 571
Score = 108 bits (269), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/127 (45%), Positives = 79/127 (62%), Gaps = 6/127 (4%)
Query: 76 CGVLTVEIEHVDVAIMEKLEQQ--GVDCQPKASTIRIIQDKYIQKVHFSPHGIPLPEFME 133
C VLT+EIEHVDV ++ L+ + + P TIR+IQDKYIQK H +GI + + +
Sbjct: 66 CDVLTIEIEHVDVPTLKNLQVKHPKLKIYPSPETIRLIQDKYIQKEHLIKNGIAVTQSVP 125
Query: 134 VNDLE--SARRAGKQFGYPLMVKSKSLAYDGRGNAVAKSEEELSSAITALGGFDRSLYIE 191
V S G+ G+P ++KS++LAYDGRGN V K++E + A+ L DR LY E
Sbjct: 126 VEQASETSLLNVGRDLGFPFVLKSRTLAYDGRGNFVVKNKEMIPEALEVLK--DRPLYAE 183
Query: 192 KWAPFVK 198
KWAPF K
Sbjct: 184 KWAPFTK 190
>sp|P0CQ37|PUR6_CRYNB Phosphoribosylaminoimidazole carboxylase OS=Cryptococcus neoformans
var. neoformans serotype D (strain B-3501A) GN=ADE2 PE=3
SV=1
Length = 582
Score = 107 bits (268), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/130 (46%), Positives = 87/130 (66%), Gaps = 8/130 (6%)
Query: 75 ACGVLTVEIEHVDVAIMEKLEQQGV-DCQPKASTIRIIQDKYIQKVHFSPHGIPLPEFME 133
AC +LTVEIEHV+ ++E +E++G+ + QP TIR+IQ+KY QK + + G+ + F E
Sbjct: 70 ACDILTVEIEHVNADVLEAVEKEGLCEVQPSPKTIRLIQNKYDQKKYLAERGVAVAPFEE 129
Query: 134 V--NDLESARRA-GKQFGYPLMVKSKSLAYDGRGNAVAK--SEEELSSAITALGGFDRSL 188
+ N E +A + G PLM+K+K+LAYDGRGN+ K S E++ +++ LG DR L
Sbjct: 130 LPANPTEEDFKAIAGRLGLPLMLKAKTLAYDGRGNSPLKSASSEDIQASLKFLG--DRPL 187
Query: 189 YIEKWAPFVK 198
Y E WAPFVK
Sbjct: 188 YAEGWAPFVK 197
>sp|P0CQ36|PUR6_CRYNJ Phosphoribosylaminoimidazole carboxylase OS=Cryptococcus neoformans
var. neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=ADE2 PE=3 SV=1
Length = 582
Score = 105 bits (263), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 86/130 (66%), Gaps = 8/130 (6%)
Query: 75 ACGVLTVEIEHVDVAIMEKLEQQGV-DCQPKASTIRIIQDKYIQKVHFSPHGIPLPEFME 133
AC +LTVEIEHV+ ++E +E++G+ + QP TIR+IQ+KY QK + + G+ + F E
Sbjct: 70 ACDILTVEIEHVNADVLEAVEKEGLCEVQPSPQTIRLIQNKYDQKKYLAERGVAVAPFEE 129
Query: 134 V--NDLESARRA-GKQFGYPLMVKSKSLAYDGRGNAVAKSEE--ELSSAITALGGFDRSL 188
+ N E +A + G PLM+K+K+LAYDGRGN+ KS ++ +++ LG DR L
Sbjct: 130 LPANPTEEDFKAIAGRLGLPLMLKAKTLAYDGRGNSPLKSASSGDIQASLKFLG--DRPL 187
Query: 189 YIEKWAPFVK 198
Y E WAPFVK
Sbjct: 188 YAEGWAPFVK 197
>sp|Q01930|PUR6_OGAME Phosphoribosylaminoimidazole carboxylase OS=Ogataea methanolica
GN=ADE1 PE=3 SV=1
Length = 543
Score = 105 bits (263), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/125 (45%), Positives = 77/125 (61%), Gaps = 4/125 (3%)
Query: 76 CGVLTVEIEHVDV-AIMEKLEQQGVDCQPKASTIRIIQDKYIQKVHFSPHGIPLPEFMEV 134
C VLTVEIEHVD A++E + G+ P TI +I+DKY+QK H +GI + E V
Sbjct: 67 CDVLTVEIEHVDTDALVEVQKATGIKIFPSPETISLIKDKYLQKEHLIKNGIAVAESCSV 126
Query: 135 -NDLESARRAGKQFGYPLMVKSKSLAYDGRGNAVAKSEEELSSAITALGGFDRSLYIEKW 193
+ S G ++G+P M+KS+++AYDGRGN V K + + A+ L DR LY EKW
Sbjct: 127 ESSAASLEEVGAKYGFPYMLKSRTMAYDGRGNFVVKDKSYIPEALKVLD--DRPLYAEKW 184
Query: 194 APFVK 198
APF K
Sbjct: 185 APFSK 189
>sp|Q54975|PURK_SYNE7 N5-carboxyaminoimidazole ribonucleotide synthase OS=Synechococcus
elongatus (strain PCC 7942) GN=purK PE=3 SV=2
Length = 395
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 76 CGVLTVEIEHVDVAIMEKLEQQGVDCQPKASTIRIIQDKYIQKVHFSPHGIPLPEFMEVN 135
C V+T E E VD+ + +LE+ GV +P+ + I + DK Q+ + G+P P F+ +
Sbjct: 71 CDVITFENEFVDLPALTELEETGVRFRPRPAAIASLLDKLDQRQLLTRLGLPTPRFLAIA 130
Query: 136 DLESARRAGKQFGYPLMVKSKSLAYDGRGNAVAKSEEELSSAITALGGFDRSLYIEKWAP 195
+ G+P+++K + YDG+G V +S EL A+ + G D L +E++ P
Sbjct: 131 AATATESELTALGFPVVLKQRRHGYDGKGTQVLRSLAELQQALQSYG--DTPLLLEEFIP 188
Query: 196 F 196
F
Sbjct: 189 F 189
>sp|P74724|PURK_SYNY3 N5-carboxyaminoimidazole ribonucleotide synthase OS=Synechocystis
sp. (strain PCC 6803 / Kazusa) GN=purK PE=3 SV=1
Length = 388
Score = 60.5 bits (145), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 62/121 (51%), Gaps = 8/121 (6%)
Query: 76 CGVLTVEIEHVDVAIMEKLEQQGVDCQPKASTIRIIQDKYIQKVHFSPHGIPLPEFMEVN 135
CGV+T E E VD+ +EKL QQG+ P+ + + DK+ Q+ G+P+P+F +
Sbjct: 67 CGVITFENEFVDLPSLEKLAQQGITFHPRLDALAPLLDKWEQRHFLQNLGLPVPDFWALE 126
Query: 136 DLESARRAGKQFGYPLMVKSKSLAYDGRGNAVAKSEEELSSAITALGGFDRSLYIEKWAP 195
L + + +P ++K++ YDG+G + S +L A G S +E + P
Sbjct: 127 SLPA-----QLPDFPWVLKARRHGYDGQGTQIINSPADLPDLSKAPPG---SWMVESFVP 178
Query: 196 F 196
+
Sbjct: 179 Y 179
>sp|P72158|PURK_PSEAE N5-carboxyaminoimidazole ribonucleotide synthase OS=Pseudomonas
aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 /
LMG 12228) GN=purK PE=3 SV=2
Length = 360
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 3/120 (2%)
Query: 78 VLTVEIEHVDVAIMEKLEQQGVDCQPKASTIRIIQDKYIQKVHFSPHGIPLPEFMEVNDL 137
++T E E V + L Q V P A ++RI +D++ +K F GIP P+F +V
Sbjct: 63 LVTFEFESVPAETVAFLSQF-VPVYPNAESLRIARDRWFEKSMFKDLGIPTPDFADVQSQ 121
Query: 138 ESARRAGKQFGYPLMVKSKSLAYDGRGNAVAKSEEELSSAITALGGFDRSLYIEKWAPFV 197
A G P ++K+++L YDG+G V + ++ A LG +E + PF
Sbjct: 122 ADLDAAAAAIGLPAVLKTRTLGYDGKGQKVLRQPADVQGAFAELGSV--PCILEGFVPFT 179
>sp|O66608|PURK_AQUAE N5-carboxyaminoimidazole ribonucleotide synthase OS=Aquifex
aeolicus (strain VF5) GN=purK PE=1 SV=1
Length = 365
Score = 57.4 bits (137), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 63/124 (50%), Gaps = 5/124 (4%)
Query: 73 VVACGVLTVEIEHVDVAIMEKLEQQGVDCQPKASTIRIIQDKYIQKVHFSPHGIPLPEFM 132
V +C ++T E EH+ ++EK E + + P + + + + +K+ HG P+PEF+
Sbjct: 55 VDSCDIITYEFEHIKDEVLEKCESKLI---PNPQALYVKKSRIREKLFLKKHGFPVPEFL 111
Query: 133 EVNDLESARRAGKQFGYPLMVKSKSLAYDGRGNAVAKSEEELSSAITALGGFDRSLYIEK 192
+ E A K F P+++K++ L YDG+G K E+ + + + S IE+
Sbjct: 112 VIKRDEIID-ALKSFKLPVVIKAEKLGYDGKGQYRIKKLEDANQVVKNHDK-EESFIIEE 169
Query: 193 WAPF 196
+ F
Sbjct: 170 FVKF 173
>sp|Q54QE4|PURCE_DICDI Bifunctional purine synthesis protein purC/E OS=Dictyostelium
discoideum GN=purC/E PE=1 SV=1
Length = 997
Score = 55.5 bits (132), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 1/100 (1%)
Query: 78 VLTVEIEHVDVAIMEKLEQQGVDCQPKASTIRIIQDKYIQKVHFSPHGIPLPEFMEVNDL 137
V+T E E++ V +E L +Q V P +R QD+ ++K IP +F V
Sbjct: 693 VVTYEFENIMVEPVEYLTKQ-VAVFPDPKILRTCQDRVLEKTFIQSLDIPTAQFQSVESF 751
Query: 138 ESARRAGKQFGYPLMVKSKSLAYDGRGNAVAKSEEELSSA 177
+ A ++ GYP ++KS ++ YDG+G + +L A
Sbjct: 752 NDLKSAIEKIGYPAILKSNTMGYDGKGQVKLTDQVDLEQA 791
>sp|P65898|PURK_MYCTU N5-carboxyaminoimidazole ribonucleotide synthase OS=Mycobacterium
tuberculosis GN=purK PE=3 SV=1
Length = 429
Score = 51.2 bits (121), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
Query: 74 VACG--VLTVEIEHVDVAIMEKLEQQGVDCQPKASTIRIIQDKYIQKVHFSPHGIPLPEF 131
VA G VLT + EHV ++EKL GV+ P + QDK + + + G+ +P +
Sbjct: 75 VAAGADVLTFDHEHVPNELLEKLVADGVNVAPSPQALVHAQDKLVMRQRLAAAGVAVPRY 134
Query: 132 MEVNDLESARRAGKQFGYPLMVKSKSLAYDGRGNAVAK 169
+ D + + P++VK+ YDGRG +A+
Sbjct: 135 AGIKDPDEIDVFAARVDAPIVVKAVRGGYDGRGVRMAR 172
>sp|P65899|PURK_MYCBO N5-carboxyaminoimidazole ribonucleotide synthase OS=Mycobacterium
bovis (strain ATCC BAA-935 / AF2122/97) GN=purK PE=3
SV=1
Length = 429
Score = 51.2 bits (121), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
Query: 74 VACG--VLTVEIEHVDVAIMEKLEQQGVDCQPKASTIRIIQDKYIQKVHFSPHGIPLPEF 131
VA G VLT + EHV ++EKL GV+ P + QDK + + + G+ +P +
Sbjct: 75 VAAGADVLTFDHEHVPNELLEKLVADGVNVAPSPQALVHAQDKLVMRQRLAAAGVAVPRY 134
Query: 132 MEVNDLESARRAGKQFGYPLMVKSKSLAYDGRGNAVAK 169
+ D + + P++VK+ YDGRG +A+
Sbjct: 135 AGIKDPDEIDVFAARVDAPIVVKAVRGGYDGRGVRMAR 172
>sp|Q6GI19|PURK_STAAR N5-carboxyaminoimidazole ribonucleotide synthase OS=Staphylococcus
aureus (strain MRSA252) GN=purK PE=3 SV=1
Length = 374
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 52/103 (50%), Gaps = 1/103 (0%)
Query: 76 CGVLTVEIEHVDVAIMEKLEQQGVDCQPKASTIRIIQDKYIQKVHFSPHGIPLPEFMEVN 135
C V+T E E++ + KL + + I+++QD+ +K G + F+ V
Sbjct: 71 CDVITYEFENISAQQL-KLLCEKYNIPQGYQAIQLLQDRLTEKETLKSAGTKVVPFISVK 129
Query: 136 DLESARRAGKQFGYPLMVKSKSLAYDGRGNAVAKSEEELSSAI 178
+ + +A + GYP +VK++ YDG+G + +E++L I
Sbjct: 130 ESKDIDKAIETLGYPFIVKTRFGGYDGKGQVLINNEKDLQEGI 172
>sp|Q39QR8|PURT_GEOMG Phosphoribosylglycinamide formyltransferase 2 OS=Geobacter
metallireducens (strain GS-15 / ATCC 53774 / DSM 7210)
GN=purT PE=3 SV=1
Length = 392
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 6/120 (5%)
Query: 82 EIEHVDVAIMEKLEQQGVDCQPKASTIRIIQDKY-IQKVHFSPHGIPLPEFMEVNDLESA 140
EIE +D + +LEQ+G P A + ++ I+++ G+P + +ES
Sbjct: 80 EIEAIDTPYLLELEQEGYTVIPTARAANLTMNREGIRRLAAEELGLPTAAYRFAASIESF 139
Query: 141 RRAGKQFGYPLMVKSKSLAYDGRGNAVAKSEEELSSAIT----ALGGFDRSLYIEKWAPF 196
R A K G P +VK ++ G+G +V KS EE+ A T G ++ +E++ PF
Sbjct: 140 RAAVKDIGLPCVVK-PIMSSSGKGQSVVKSMEEIDGAWTYAMEGGRGASDTVIVEEFIPF 198
>sp|P46701|PURK_MYCLE N5-carboxyaminoimidazole ribonucleotide synthase OS=Mycobacterium
leprae (strain TN) GN=purK PE=3 SV=1
Length = 439
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 9/100 (9%)
Query: 74 VACGV--LTVEIEHVDVAIMEKLEQQGVDCQPKASTIRIIQDKYIQKVHFSPHGIPLPEF 131
VA G LT + EHV +++KL +G++ P + QDK + + + G +P F
Sbjct: 71 VALGADALTFDHEHVPTELLDKLVAEGINVAPSPQALVHAQDKLVMRRRLAALGAAMPRF 130
Query: 132 MEVNDLES-------ARRAGKQFGYPLMVKSKSLAYDGRG 164
M ++ ++ A+R P++VK+ YDGRG
Sbjct: 131 MALDSVDDLAEIDAFAQRLTGSKDAPMVVKAVRGGYDGRG 170
>sp|Q4L574|PURK_STAHJ N5-carboxyaminoimidazole ribonucleotide synthase OS=Staphylococcus
haemolyticus (strain JCSC1435) GN=purK PE=3 SV=2
Length = 374
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 50/100 (50%), Gaps = 1/100 (1%)
Query: 78 VLTVEIEHVDVAIMEKLEQQGVDCQPKASTIRIIQDKYIQKVHFSPHGIPLPEFMEVNDL 137
V+T E E++ + +L Q+ + I+++QD+ +K G + F+ + +
Sbjct: 73 VITYEFENISAEQLIRLTQK-FNIPQGYQAIQLLQDRLTEKQTLQKAGSKIVPFLPIKEE 131
Query: 138 ESARRAGKQFGYPLMVKSKSLAYDGRGNAVAKSEEELSSA 177
+ Q GYP +VK++ YDG+G + K+EE + A
Sbjct: 132 KDLNVVINQLGYPFIVKTRFGGYDGKGQVLVKNEESIQEA 171
>sp|Q8NX94|PURK_STAAW N5-carboxyaminoimidazole ribonucleotide synthase OS=Staphylococcus
aureus (strain MW2) GN=purK PE=3 SV=1
Length = 374
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Query: 76 CGVLTVEIEHVDVAIMEKLEQQGVDCQPKASTIRIIQDKYIQKVHFSPHGIPLPEFMEVN 135
C V+T E E++ + KL + + I+++QD+ +K G + F+ V
Sbjct: 71 CDVITYEFENISAQQL-KLLCEKYNIPQGYQAIQLLQDRLTEKETLKSAGTKVVPFISVK 129
Query: 136 DLESARRAGKQFGYPLMVKSKSLAYDGRGNAVAKSEEELSSAI 178
+ +A + GYP +VK++ YDG+G + +E++L
Sbjct: 130 ESTDIDKAIETLGYPFIVKTRFGGYDGKGQVLINNEKDLQEGF 172
>sp|Q6GAE8|PURK_STAAS N5-carboxyaminoimidazole ribonucleotide synthase OS=Staphylococcus
aureus (strain MSSA476) GN=purK PE=3 SV=1
Length = 374
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Query: 76 CGVLTVEIEHVDVAIMEKLEQQGVDCQPKASTIRIIQDKYIQKVHFSPHGIPLPEFMEVN 135
C V+T E E++ + KL + + I+++QD+ +K G + F+ V
Sbjct: 71 CDVITYEFENISAQQL-KLLCEKYNIPQGYQAIQLLQDRLTEKETLKSAGTKVVPFISVK 129
Query: 136 DLESARRAGKQFGYPLMVKSKSLAYDGRGNAVAKSEEELSSAI 178
+ +A + GYP +VK++ YDG+G + +E++L
Sbjct: 130 ESTDIDKAIETLGYPFIVKTRFGGYDGKGQVLINNEKDLQEGF 172
>sp|Q7A695|PURK_STAAN N5-carboxyaminoimidazole ribonucleotide synthase OS=Staphylococcus
aureus (strain N315) GN=purK PE=1 SV=1
Length = 374
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Query: 76 CGVLTVEIEHVDVAIMEKLEQQGVDCQPKASTIRIIQDKYIQKVHFSPHGIPLPEFMEVN 135
C V+T E E++ + KL + + I+++QD+ +K G + F+ V
Sbjct: 71 CDVITYEFENISAQQL-KLLCEKYNIPQGYQAIQLLQDRLTEKETLKSAGTKVVPFISVK 129
Query: 136 DLESARRAGKQFGYPLMVKSKSLAYDGRGNAVAKSEEELSSAI 178
+ +A + GYP +VK++ YDG+G + +E++L
Sbjct: 130 ESTDIDKAIETLGYPFIVKTRFGGYDGKGQVLINNEKDLQEGF 172
>sp|Q99V32|PURK_STAAM N5-carboxyaminoimidazole ribonucleotide synthase OS=Staphylococcus
aureus (strain Mu50 / ATCC 700699) GN=purK PE=1 SV=1
Length = 374
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Query: 76 CGVLTVEIEHVDVAIMEKLEQQGVDCQPKASTIRIIQDKYIQKVHFSPHGIPLPEFMEVN 135
C V+T E E++ + KL + + I+++QD+ +K G + F+ V
Sbjct: 71 CDVITYEFENISAQQL-KLLCEKYNIPQGYQAIQLLQDRLTEKETLKSAGTKVVPFISVK 129
Query: 136 DLESARRAGKQFGYPLMVKSKSLAYDGRGNAVAKSEEELSSAI 178
+ +A + GYP +VK++ YDG+G + +E++L
Sbjct: 130 ESTDIDKAIETLGYPFIVKTRFGGYDGKGQVLINNEKDLQEGF 172
>sp|Q5HH19|PURK_STAAC N5-carboxyaminoimidazole ribonucleotide synthase OS=Staphylococcus
aureus (strain COL) GN=purK PE=3 SV=1
Length = 374
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Query: 76 CGVLTVEIEHVDVAIMEKLEQQGVDCQPKASTIRIIQDKYIQKVHFSPHGIPLPEFMEVN 135
C V+T E E++ + KL + + I+++QD+ +K G + F+ V
Sbjct: 71 CDVITYEFENISAQQL-KLLCEKYNIPQGYQAIQLLQDRLTEKETLKSAGTKVVPFISVK 129
Query: 136 DLESARRAGKQFGYPLMVKSKSLAYDGRGNAVAKSEEELSSAI 178
+ +A + GYP +VK++ YDG+G + +E++L
Sbjct: 130 ESTDIDKAIETLGYPFIVKTRFGGYDGKGQVLINNEKDLQEGF 172
>sp|Q49WI9|PURK_STAS1 N5-carboxyaminoimidazole ribonucleotide synthase OS=Staphylococcus
saprophyticus subsp. saprophyticus (strain ATCC 15305 /
DSM 20229) GN=purK PE=3 SV=1
Length = 375
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
Query: 78 VLTVEIEHVDVAIMEKLEQQGVDCQPKASTIRIIQDKYIQKVHFSPHGIPLPEFMEVNDL 137
V+T E E++ ++ L + + I+++QD+ +K G + F+++ D
Sbjct: 73 VITYEFENISANQLQALASK-YNIPQGYQAIQLLQDRLTEKQTLQDSGSNIAPFLQLTDY 131
Query: 138 ESARRAGKQFGYPLMVKSKSLAYDGRGNAVAKSEEELSSA 177
+ +A GYP +VK++ YDG+G + K L A
Sbjct: 132 DDLVKAVDSIGYPFIVKTRFGGYDGKGQVLVKDATHLDEA 171
>sp|B0K485|DDL_THEPX D-alanine--D-alanine ligase OS=Thermoanaerobacter sp. (strain X514)
GN=ddl PE=3 SV=1
Length = 359
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 113 DKYIQKVHFSPHGIPLPEFM-----EVNDLESARRAGKQFGYPLMVKSKSLAYDGRGNAV 167
DK K F G+P P+F+ E+ DLE+ ++ + GYP VK +L G
Sbjct: 136 DKVFTKRIFKEAGLPTPDFVVVYGKEIEDLEAIKKKIEHLGYPCFVKPANLG-SSVGITK 194
Query: 168 AKSEEELSSAITALGGFDRSLYIEK 192
+EEEL A+ +DR L IE+
Sbjct: 195 VHNEEELPGALKLAAKYDRKLLIER 219
>sp|B0KBI1|DDL_THEP3 D-alanine--D-alanine ligase OS=Thermoanaerobacter pseudethanolicus
(strain ATCC 33223 / 39E) GN=ddl PE=3 SV=1
Length = 359
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 113 DKYIQKVHFSPHGIPLPEFM-----EVNDLESARRAGKQFGYPLMVKSKSLAYDGRGNAV 167
DK K F G+P P+F+ E+ DLE+ ++ + GYP VK +L G
Sbjct: 136 DKVFTKRIFKEAGLPTPDFVVVYGKEIEDLEAIKKKIEHLGYPCFVKPANLG-SSVGITK 194
Query: 168 AKSEEELSSAITALGGFDRSLYIEK 192
+EEEL A+ +DR L IE+
Sbjct: 195 VHNEEELPGALKLAAKYDRKLLIER 219
>sp|B2A170|CARB_NATTJ Carbamoyl-phosphate synthase large chain OS=Natranaerobius
thermophilus (strain ATCC BAA-1301 / DSM 18059 /
JW/NM-WN-LF) GN=carB PE=3 SV=1
Length = 1106
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 79 LTVEIEHVDVAIMEKLEQQGVDC-QPKASTIRIIQDKYIQKVHFSPHGIPLPEFMEVNDL 137
L + +E VD I++K E VD S+I+ +D+ + K + G P+PE V+ +
Sbjct: 96 LNLAMELVDSGILDKYE---VDLLGTTMSSIKKAEDRDVFKTTMNDIGEPIPESKIVSTV 152
Query: 138 ESARRAGKQFGYPLMVKSKSLAYDGRGNAVAKSEEELS 175
+ A+ K GYP++V+ + G G VA++E++LS
Sbjct: 153 DQAKDFAKNIGYPVIVRP-AYTLGGTGGGVAQNEQQLS 189
>sp|O06457|PURK_SULSO N5-carboxyaminoimidazole ribonucleotide synthase OS=Sulfolobus
solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 /
P2) GN=purK PE=3 SV=1
Length = 365
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Query: 73 VVACGVLTVEIEHVDVAIMEKLEQQGVDCQPKASTIRIIQDKYIQKVHFSPHGIPLPEFM 132
V + V+T E EHV +E E G P+ +++ + +++Y +K+ + H +P P F
Sbjct: 62 VDSSDVITFEFEHVYEKALEYAEYSG-KLLPRLNSVELKRERYKEKLFYRQHNLPTPRFY 120
Query: 133 EVNDLESARRAGK-QFGYPLMVKSKSLAYDGRG 164
D E A + + +F ++K YDG+G
Sbjct: 121 VAEDGEEALKILREEFNNVGVIKESKGGYDGKG 153
>sp|A6L404|PURT_BACV8 Phosphoribosylglycinamide formyltransferase 2 OS=Bacteroides
vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154)
GN=purT PE=3 SV=1
Length = 389
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 2/101 (1%)
Query: 78 VLTVEIEHVDVAIMEKLEQQGVDCQPKASTIRIIQD-KYIQKVHFSPHGIPLPEFMEVND 136
++ EIE + + LEQ+G+ P A + + K I+ + G+ ++
Sbjct: 68 IIVPEIEAIRTERLYHLEQEGIQVVPSARAVNFTMNRKAIRDLAAKELGLKTAKYFYAKS 127
Query: 137 LESARRAGKQFGYPLMVKSKSLAYDGRGNAVAKSEEELSSA 177
LE + A K+ G+P +VK ++ G+G ++ KS +EL A
Sbjct: 128 LEELQEAAKEIGFPCVVKP-LMSSSGKGQSLVKSADELEQA 167
>sp|Q18K60|PURT_HALWD Phosphoribosylglycinamide formyltransferase 2 OS=Haloquadratum
walsbyi (strain DSM 16790) GN=purT PE=3 SV=1
Length = 401
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Query: 91 MEKLEQQGVDCQPKASTIRIIQDK-YIQKVHFSPHGIPLPEFMEVNDLESARRAGKQFGY 149
+++LE QG D P A R+ D+ +I++ G+ E+ ++ ++ R+A + G
Sbjct: 96 LKRLETQGYDVVPTAQATRLTMDREWIREFAAEEVGVTTNEYAFADNYDTYRKAVEDIGI 155
Query: 150 PLMVKSKSLAYDGRGNAVAKSEEELSSA 177
P++VK +++ G+G ++ + E++ A
Sbjct: 156 PVVVK-PTMSSSGKGQSIVRESAEINGA 182
>sp|Q4JC46|PURT_SULAC Phosphoribosylglycinamide formyltransferase 2 OS=Sulfolobus
acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 /
NBRC 15157 / NCIMB 11770) GN=purT PE=3 SV=1
Length = 398
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 65/132 (49%), Gaps = 14/132 (10%)
Query: 68 ELPVAVVACGVLTVEIEHVDVAIMEKLEQQGVDCQPKASTIRIIQDKYIQKVHFSPHGIP 127
E P AV+A EIE ++ + K+E G+ P A ++I D+ I+ F+ +
Sbjct: 73 ERPDAVIA------EIEAINTETLSKIEMDGIKVMPNARAVKICMDR-IELRRFAAEKVK 125
Query: 128 LPE--FMEVNDLESARRAGKQFGYPLMVKSKSLAYDGRGNAV----AKSEEELSSAITAL 181
+P + E ++ K GYP ++K + ++ G G+ V ++ EE+ A+T
Sbjct: 126 VPTTAYGFATSPEEVKKMCKDVGYPCIIKPQ-MSSSGHGHEVIYDESQVEEKFKEALTHA 184
Query: 182 GGFDRSLYIEKW 193
G +++ +E++
Sbjct: 185 RGKSKTVIVEEY 196
>sp|B4F1Q4|PURT_PROMH Phosphoribosylglycinamide formyltransferase 2 OS=Proteus mirabilis
(strain HI4320) GN=purT PE=3 SV=1
Length = 399
Score = 43.5 bits (101), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 63/120 (52%), Gaps = 6/120 (5%)
Query: 82 EIEHVDVAIMEKLEQQGVDCQPKASTIRIIQDKY-IQKVHFSPHGIPLPEFMEVNDLESA 140
EIE + +++ +LE G P A +++ D+ I+++ + + V+D +
Sbjct: 82 EIEAIATSLLVELENNGQKVVPCARAVKLTMDREGIRRLAAETLHLLTSPYQFVDDEAAF 141
Query: 141 RRAGKQFGYPLMVKSKSLAYDGRGNAVAKSEEELSSAITALGGFDRS----LYIEKWAPF 196
R+A + G+P +VK ++ G+G +V +SE++L+SA T R+ + +EK PF
Sbjct: 142 RKAAVEIGFPCIVKP-VMSSSGKGQSVIRSEQDLTSAWTYSQEGGRAGQGRVIVEKMIPF 200
>sp|Q1B9F9|CARB_MYCSS Carbamoyl-phosphate synthase large chain OS=Mycobacterium sp.
(strain MCS) GN=carB PE=3 SV=1
Length = 1112
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 88 VAIMEKLEQQGV---DCQPKASTIRIIQDKYIQKVHFSPHGIPLPEFMEVNDLESARRAG 144
+ + E+LEQ GV PKA I + +D+ G+P P F + ARR
Sbjct: 662 LGLAERLEQAGVPIVGTSPKA--IDLAEDRGAFGEVLRTAGLPAPRFGLATTFDQARRIA 719
Query: 145 KQFGYPLMVKSKSLAYDGRGNAVAKSEEELSSAIT 179
GYP++V+ S GRG + E+ L IT
Sbjct: 720 ADIGYPVLVR-PSYVLGGRGMEIVYDEQTLEGYIT 753
>sp|A1UFK4|CARB_MYCSK Carbamoyl-phosphate synthase large chain OS=Mycobacterium sp.
(strain KMS) GN=carB PE=3 SV=1
Length = 1112
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 88 VAIMEKLEQQGV---DCQPKASTIRIIQDKYIQKVHFSPHGIPLPEFMEVNDLESARRAG 144
+ + E+LEQ GV PKA I + +D+ G+P P F + ARR
Sbjct: 662 LGLAERLEQAGVPIVGTSPKA--IDLAEDRGAFGEVLRTAGLPAPRFGLATTFDQARRIA 719
Query: 145 KQFGYPLMVKSKSLAYDGRGNAVAKSEEELSSAIT 179
GYP++V+ S GRG + E+ L IT
Sbjct: 720 ADIGYPVLVR-PSYVLGGRGMEIVYDEQTLEGYIT 753
>sp|A3PZ65|CARB_MYCSJ Carbamoyl-phosphate synthase large chain OS=Mycobacterium sp.
(strain JLS) GN=carB PE=3 SV=1
Length = 1112
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 88 VAIMEKLEQQGV---DCQPKASTIRIIQDKYIQKVHFSPHGIPLPEFMEVNDLESARRAG 144
+ + E+LEQ GV PKA I + +D+ G+P P F + ARR
Sbjct: 662 LGLAERLEQAGVPIVGTSPKA--IDLAEDRGAFGEVLRTAGLPAPRFGLATTFDQARRIA 719
Query: 145 KQFGYPLMVKSKSLAYDGRGNAVAKSEEELSSAIT 179
GYP++V+ S GRG + E+ L IT
Sbjct: 720 ADIGYPVLVR-PSYVLGGRGMEIVYDEQTLEGYIT 753
>sp|Q8D2R3|PURT_WIGBR Phosphoribosylglycinamide formyltransferase 2 OS=Wigglesworthia
glossinidia brevipalpis GN=purT PE=3 SV=1
Length = 392
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 6/120 (5%)
Query: 82 EIEHVDVAIMEKLEQQGVDCQPKASTIRIIQDKYIQKVHFSPH-GIPLPEFMEVNDLESA 140
EIE + + +LE+ G + P A TI I ++ + +V S I E+ + +
Sbjct: 82 EIEAISTNALIELEKNGYNIVPSAKTIHITMNRKLIRVLVSKKLNILTSEYQFASSFDEL 141
Query: 141 RRAGKQFGYPLMVKSKSLAYDGRGNAVAKSEEELSSAITALGGFDRS----LYIEKWAPF 196
+ K GYP ++K ++ G+G +V +E+EL + + R+ + IEK PF
Sbjct: 142 KIKTKVIGYPCLIKP-IMSSSGKGQSVIYNEKELRHSWEKSQTYGRTSLGEVIIEKIIPF 200
>sp|A2BWY5|PURT_PROM5 Phosphoribosylglycinamide formyltransferase 2 OS=Prochlorococcus
marinus (strain MIT 9515) GN=purT PE=3 SV=1
Length = 390
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Query: 82 EIEHVDVAIMEKLEQQGVDCQPKASTIRIIQDKY-IQKVHFSPHGIPLPEFMEVNDLESA 140
EIE + + +++LE++G++ P A T+ I +++ I+ + I F V + E
Sbjct: 78 EIEALSIEALKELEEEGINIVPNARTVEITMNRHKIRDLASKELNIKTANFSYVFNAEEL 137
Query: 141 RRAGKQFGYPLMVKSKSLAYDGRGNAVAKSEEEL 174
+ G+PL++K ++ G+G ++ K +E+L
Sbjct: 138 EMKSSEIGFPLLLKP-LMSSSGKGQSLVKRKEDL 170
>sp|Q8CPP2|PURK_STAES N5-carboxyaminoimidazole ribonucleotide synthase OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=purK PE=3 SV=1
Length = 375
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 52/105 (49%), Gaps = 11/105 (10%)
Query: 78 VLTVEIEHVDVAIMEKLEQ-----QGVDCQPKASTIRIIQDKYIQKVHFSPHGIPLPEFM 132
V+T E E++ ++KL Q QG I ++QD+ +K + F+
Sbjct: 73 VVTYEFENISSEQLKKLTQLYHIPQGYQA------IELLQDRLTEKQTLLEANTQIVPFV 126
Query: 133 EVNDLESARRAGKQFGYPLMVKSKSLAYDGRGNAVAKSEEELSSA 177
++ + +A ++ G+P +VK++ YDG+G + +++ EL A
Sbjct: 127 QIQTNQDLLKAIEKLGFPFIVKTRFGGYDGKGQILVRNDSELDEA 171
>sp|P52559|PURK_BRUME N5-carboxyaminoimidazole ribonucleotide synthase OS=Brucella
melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC
10094) GN=purK PE=3 SV=2
Length = 362
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 56/113 (49%), Gaps = 2/113 (1%)
Query: 75 ACGVLTVEIEHVDVAIMEKLEQQGVDCQPKASTIRIIQDKYIQKVHFSPHGIPLPEFMEV 134
A V+T E E+V V+ +KL + + P A+ + I QD++ +K + GI + V
Sbjct: 70 ASDVITYEFENVPVSAADKLAETALVLPPPAA-LEISQDRFTEKQFLNESGIETAPWRLV 128
Query: 135 NDLESARRAGKQFGYPLMVKSKSLAYDGRGNAVAKSEEELSSAITALGGFDRS 187
+D E+ A G ++K + L YDG+G S +E + A A +++
Sbjct: 129 DDEETLIAALGALGGRGILKIRRLGYDGKGQVRLASLDE-TQACNAFAAINKA 180
>sp|C6DFT2|PURT_PECCP Phosphoribosylglycinamide formyltransferase 2 OS=Pectobacterium
carotovorum subsp. carotovorum (strain PC1) GN=purT PE=3
SV=1
Length = 392
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 51/97 (52%), Gaps = 2/97 (2%)
Query: 82 EIEHVDVAIMEKLEQQGVDCQPKASTIRIIQDKY-IQKVHFSPHGIPLPEFMEVNDLESA 140
EIE + ++ LE+QG P A R+ ++ I+++ G+P + + ES
Sbjct: 82 EIEAIATDMLVTLEKQGHHVVPCAEATRLTMNREGIRRLAAETLGVPTSTYRFADSEESF 141
Query: 141 RRAGKQFGYPLMVKSKSLAYDGRGNAVAKSEEELSSA 177
R+A + GYP +VK ++ G+G ++ +S E+L A
Sbjct: 142 RQAVEAIGYPCIVK-PVMSSSGKGQSLIRSAEQLDKA 177
>sp|A0B8K9|CARB_METTP Carbamoyl-phosphate synthase large chain OS=Methanosaeta
thermophila (strain DSM 6194 / PT) GN=carB PE=3 SV=1
Length = 1074
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Query: 87 DVAIMEKLEQQGVDC-QPKASTIRIIQDKYIQKVHFSPHGIPLPEFMEVNDLESARRAGK 145
++A M LE+ GV+ K +I+ +D+ + K G P+P + V LE A A K
Sbjct: 101 ELAEMGVLEKYGVEVLGTKVRSIQEAEDRDLFKKAMERIGEPVPRSIAVTSLEEAEEAMK 160
Query: 146 QFGYPLMVKSKSLAYDGRGNAVAKSEEEL 174
+ G PL+V+ + G G VA++ EEL
Sbjct: 161 ELGLPLIVRP-AYTLGGSGGGVARTHEEL 188
>sp|B0K4D7|CARB_THEPX Carbamoyl-phosphate synthase large chain OS=Thermoanaerobacter sp.
(strain X514) GN=carB PE=3 SV=1
Length = 1072
Score = 42.7 bits (99), Expect = 0.001, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 107 TIRIIQDKYIQKVHFSPHGIPLPEFMEVNDLESARRAGKQFGYPLMVKSKSLAYDGRGNA 166
+I+ +D+ + K G P+ E + V ++E A + K +GYPL+++ + G G
Sbjct: 122 SIKTAEDRKLFKRKMQEIGEPVAESVTVTNIEDALKFAKNYGYPLIIRP-AYTLGGTGGG 180
Query: 167 VAKSEEELSSAITALG 182
+A ++EEL S I +LG
Sbjct: 181 IAHNDEELIS-IVSLG 195
>sp|Q9CLZ5|PURT_PASMU Phosphoribosylglycinamide formyltransferase 2 OS=Pasteurella
multocida (strain Pm70) GN=purT PE=3 SV=1
Length = 393
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 82 EIEHVDVAIMEKLEQQGVDCQPKASTIRIIQDKY-IQKVHFSPHGIPLPEFMEVNDLESA 140
E+E + A + +LEQ G P A ++ ++ I+++ G+P + V++ +
Sbjct: 82 EVEAIATATLVELEQAGFTVIPTAKATQLTMNREGIRRLAAEELGLPTSNYQFVDNFDDF 141
Query: 141 RRAGKQFGYPLMVKSKSLAYDGRGNAVAKSEEELSSA 177
+RA ++ G P +VK ++ G G ++ KS E++ SA
Sbjct: 142 KRAVEKIGIPCVVKP-IMSSSGHGQSILKSVEQIPSA 177
>sp|B1L8T8|CARB_THESQ Carbamoyl-phosphate synthase large chain OS=Thermotoga sp. (strain
RQ2) GN=carB PE=3 SV=1
Length = 1099
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 3/101 (2%)
Query: 79 LTVEIEHVDVAIMEKLEQQGVDCQPKASTIRIIQDKYIQKVHFSPHGIPLPEFMEVNDLE 138
L + +E + I++K Q + K +I+ +D+ + K G+ + VN+L
Sbjct: 96 LNLAVELAERGILDKYGVQLIGA--KLDSIKKAEDRELFKETMEKAGLEVLRSRLVNNLA 153
Query: 139 SARRAGKQFGYPLMVKSKSLAYDGRGNAVAKSEEELSSAIT 179
A ++FGYP++++ S G G +A +EEEL +T
Sbjct: 154 DALETAREFGYPVIIRP-SFTLGGTGGGIAFNEEELRDIVT 193
Score = 30.8 bits (68), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 107 TIRIIQDKYIQKVHFSPHGIPLPEFMEVNDLESARRAGKQFGYPLMVKSKSLAYDGRGNA 166
+I I +D+ G+ P F + +E A R + GYP++V+ S GR A
Sbjct: 655 SIEIAEDREKFAKLLKQIGLKCPPFGTASSVEEALRVAENLGYPVLVRP-SYVLGGRAMA 713
Query: 167 VAKSEEEL 174
+ + +EL
Sbjct: 714 IVDTPQEL 721
>sp|Q9WZ27|CARB_THEMA Carbamoyl-phosphate synthase large chain OS=Thermotoga maritima
(strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
GN=carB PE=3 SV=1
Length = 1099
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 3/101 (2%)
Query: 79 LTVEIEHVDVAIMEKLEQQGVDCQPKASTIRIIQDKYIQKVHFSPHGIPLPEFMEVNDLE 138
L + +E + I++K Q + K +I+ +D+ + K G+ + VN+L
Sbjct: 96 LNLAVELAERGILDKYGVQLIGA--KLESIKKAEDRELFKETMEKAGLEVLRSRLVNNLA 153
Query: 139 SARRAGKQFGYPLMVKSKSLAYDGRGNAVAKSEEELSSAIT 179
A ++FGYP++++ S G G +A +EEEL +T
Sbjct: 154 DALETAREFGYPVIIRP-SFTLGGTGGGIAFNEEELRDIVT 193
Score = 30.8 bits (68), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 107 TIRIIQDKYIQKVHFSPHGIPLPEFMEVNDLESARRAGKQFGYPLMVKSKSLAYDGRGNA 166
+I I +D+ G+ P F + +E A R + GYP++V+ S GR A
Sbjct: 655 SIEIAEDREKFAKLLKQIGLKCPPFGTASSVEEALRVAENLGYPVLVRP-SYVLGGRAMA 713
Query: 167 VAKSEEEL 174
+ + +EL
Sbjct: 714 IVDTPQEL 721
>sp|B9KB91|CARB_THENN Carbamoyl-phosphate synthase large chain OS=Thermotoga neapolitana
(strain ATCC 49049 / DSM 4359 / NS-E) GN=carB PE=3 SV=1
Length = 1099
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 3/101 (2%)
Query: 79 LTVEIEHVDVAIMEKLEQQGVDCQPKASTIRIIQDKYIQKVHFSPHGIPLPEFMEVNDLE 138
L + +E + I+++ Q + K +I+ +D+ + K G+ + VN+L
Sbjct: 96 LNLAVELAESGILDRYGVQLIGA--KLESIKKAEDRELFKKTMEEAGLEVLRSRLVNNLT 153
Query: 139 SARRAGKQFGYPLMVKSKSLAYDGRGNAVAKSEEELSSAIT 179
A ++FGYP++++ S G G VA +EEEL +T
Sbjct: 154 DALETAREFGYPVIIRP-SFTLGGTGGGVAFNEEELREIVT 193
Score = 30.4 bits (67), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Query: 90 IMEKLEQQGVDCQPKA-STIRIIQDKYIQKVHFSPHGIPLPEFMEVNDLESARRAGKQFG 148
I L ++GV+ + +I I +D+ G+ P F + +E A + + G
Sbjct: 637 IARHLVEEGVNIIGTSFESIEIAEDREKFAKLLKRIGLRCPPFGTASSVEEALKVAEDLG 696
Query: 149 YPLMVKSKSLAYDGRGNAVAKSEEEL 174
YP++V+ S GR A+ + EEL
Sbjct: 697 YPVLVRP-SYVLGGRAMAIVDTPEEL 721
>sp|A5IJL8|CARB_THEP1 Carbamoyl-phosphate synthase large chain OS=Thermotoga petrophila
(strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=carB PE=3
SV=1
Length = 1099
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 3/101 (2%)
Query: 79 LTVEIEHVDVAIMEKLEQQGVDCQPKASTIRIIQDKYIQKVHFSPHGIPLPEFMEVNDLE 138
L + +E + I++K Q + K +I+ +D+ + K G+ + VN+L
Sbjct: 96 LNLAVELAERGILDKYGVQLIGA--KLESIKKAEDRELFKETMEKAGLEVLRSRLVNNLA 153
Query: 139 SARRAGKQFGYPLMVKSKSLAYDGRGNAVAKSEEELSSAIT 179
A ++FGYP++++ S G G +A +EEEL +T
Sbjct: 154 DALETAREFGYPVIIRP-SFTLGGTGGGIAFNEEELRDIVT 193
Score = 30.8 bits (68), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 107 TIRIIQDKYIQKVHFSPHGIPLPEFMEVNDLESARRAGKQFGYPLMVKSKSLAYDGRGNA 166
+I I +D+ G+ P F + +E A R + GYP++V+ S GR A
Sbjct: 655 SIEIAEDREKFAKLLKQIGLKCPPFGTASSVEEALRVAENLGYPVLVRP-SYVLGGRAMA 713
Query: 167 VAKSEEEL 174
+ + +EL
Sbjct: 714 IVDTPQEL 721
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.137 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,478,707
Number of Sequences: 539616
Number of extensions: 3265582
Number of successful extensions: 8265
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 382
Number of HSP's that attempted gapping in prelim test: 8001
Number of HSP's gapped (non-prelim): 585
length of query: 201
length of database: 191,569,459
effective HSP length: 112
effective length of query: 89
effective length of database: 131,132,467
effective search space: 11670789563
effective search space used: 11670789563
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)