Query 042137
Match_columns 253
No_of_seqs 153 out of 1297
Neff 7.0
Searched_HMMs 46136
Date Fri Mar 29 03:14:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042137.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/042137hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1282 Serine carboxypeptidas 100.0 6.5E-71 1.4E-75 520.1 21.1 242 4-250 27-419 (454)
2 PLN02209 serine carboxypeptida 100.0 5.8E-62 1.2E-66 460.9 22.1 239 4-250 22-407 (437)
3 PF00450 Peptidase_S10: Serine 100.0 5.1E-62 1.1E-66 454.8 18.9 235 11-250 1-387 (415)
4 PLN03016 sinapoylglucose-malat 100.0 3.9E-61 8.4E-66 455.0 22.1 239 4-250 20-403 (433)
5 PTZ00472 serine carboxypeptida 100.0 2.6E-56 5.5E-61 425.8 22.7 236 10-250 36-430 (462)
6 PLN02213 sinapoylglucose-malat 100.0 3.8E-43 8.3E-48 321.0 15.2 165 78-250 1-289 (319)
7 KOG1283 Serine carboxypeptidas 100.0 4E-40 8.7E-45 293.6 13.8 219 21-250 3-386 (414)
8 COG2939 Carboxypeptidase C (ca 100.0 1.4E-34 2.9E-39 272.4 8.8 220 17-246 72-459 (498)
9 COG1506 DAP2 Dipeptidyl aminop 95.7 0.027 5.9E-07 56.2 7.1 180 32-225 374-582 (620)
10 PLN02298 hydrolase, alpha/beta 94.4 0.65 1.4E-05 42.0 11.6 113 20-143 31-149 (330)
11 PHA02857 monoglyceride lipase; 94.2 0.23 5E-06 43.4 7.9 29 193-221 208-236 (276)
12 KOG1455 Lysophospholipase [Lip 93.8 0.25 5.4E-06 45.2 7.4 136 81-221 85-273 (313)
13 TIGR01840 esterase_phb esteras 92.2 0.61 1.3E-05 39.6 7.3 109 109-222 77-196 (212)
14 TIGR01607 PST-A Plasmodium sub 90.8 0.45 9.8E-06 43.6 5.4 29 194-222 270-298 (332)
15 PF10503 Esterase_phd: Esteras 90.8 0.51 1.1E-05 41.3 5.4 102 114-220 83-195 (220)
16 PF10340 DUF2424: Protein of u 90.2 0.28 6.2E-06 46.2 3.5 180 35-226 105-332 (374)
17 TIGR03230 lipo_lipase lipoprot 86.2 2.3 4.9E-05 41.1 6.9 64 78-147 73-138 (442)
18 PLN02442 S-formylglutathione h 85.6 2.2 4.8E-05 38.2 6.2 29 192-220 215-244 (283)
19 PRK10566 esterase; Provisional 83.9 3.3 7.2E-05 35.4 6.3 32 194-225 186-217 (249)
20 TIGR03611 RutD pyrimidine util 83.6 1.3 2.9E-05 37.0 3.6 60 77-147 38-99 (257)
21 PF06057 VirJ: Bacterial virul 82.8 4.7 0.0001 34.6 6.6 117 79-213 30-160 (192)
22 PF12697 Abhydrolase_6: Alpha/ 82.7 0.84 1.8E-05 37.0 2.0 63 77-147 23-85 (228)
23 PLN02385 hydrolase; alpha/beta 81.9 2.3 4.9E-05 38.9 4.8 108 32-146 70-180 (349)
24 TIGR01249 pro_imino_pep_1 prol 80.4 5.1 0.00011 35.8 6.4 28 194-221 248-275 (306)
25 TIGR03695 menH_SHCHC 2-succiny 78.9 2.3 4.9E-05 34.9 3.4 61 78-147 27-89 (251)
26 PRK05077 frsA fermentation/res 77.8 3.8 8.1E-05 39.0 4.9 114 25-147 170-284 (414)
27 PF05577 Peptidase_S28: Serine 76.3 3.9 8.5E-05 38.8 4.6 63 78-142 59-127 (434)
28 PF05728 UPF0227: Uncharacteri 75.5 3.5 7.6E-05 35.0 3.6 75 127-210 58-150 (187)
29 PF05448 AXE1: Acetyl xylan es 75.0 1.8 4E-05 39.8 1.9 101 117-221 164-289 (320)
30 PRK10673 acyl-CoA esterase; Pr 74.8 3.3 7.1E-05 35.2 3.4 60 77-147 41-100 (255)
31 KOG1454 Predicted hydrolase/ac 74.8 9.1 0.0002 35.2 6.5 26 195-220 265-290 (326)
32 PRK00870 haloalkane dehalogena 73.5 3.7 7.9E-05 36.5 3.4 114 5-147 9-134 (302)
33 TIGR02427 protocat_pcaD 3-oxoa 72.7 5.1 0.00011 33.0 3.9 30 193-222 192-221 (251)
34 PRK03204 haloalkane dehalogena 72.5 7.7 0.00017 34.4 5.3 54 77-141 59-114 (286)
35 KOG2564 Predicted acetyltransf 72.1 6.5 0.00014 36.0 4.6 42 102-147 124-165 (343)
36 KOG4409 Predicted hydrolase/ac 70.4 6.4 0.00014 36.9 4.3 104 20-142 64-174 (365)
37 TIGR03056 bchO_mg_che_rel puta 70.2 5.3 0.00012 34.1 3.6 61 78-147 54-114 (278)
38 cd00741 Lipase Lipase. Lipase 68.5 3.7 8E-05 32.9 2.1 39 106-147 9-47 (153)
39 PRK11071 esterase YqiA; Provis 67.8 6.1 0.00013 33.2 3.4 99 110-220 46-162 (190)
40 PF11144 DUF2920: Protein of u 66.4 25 0.00055 33.5 7.5 112 104-220 159-319 (403)
41 PLN02652 hydrolase; alpha/beta 63.9 12 0.00027 35.3 5.0 100 33-142 120-222 (395)
42 TIGR02240 PHA_depoly_arom poly 63.8 8.3 0.00018 33.6 3.6 28 194-221 207-234 (276)
43 PF00561 Abhydrolase_1: alpha/ 63.0 11 0.00024 30.8 4.1 28 193-220 174-201 (230)
44 PLN02965 Probable pheophorbida 62.9 11 0.00024 32.5 4.2 28 193-220 192-219 (255)
45 cd00707 Pancreat_lipase_like P 61.9 5.2 0.00011 35.8 2.0 64 78-147 66-131 (275)
46 PLN02824 hydrolase, alpha/beta 61.8 7.9 0.00017 34.0 3.1 58 77-143 54-117 (294)
47 PLN02454 triacylglycerol lipas 60.8 10 0.00022 36.3 3.8 44 103-147 204-247 (414)
48 PF05576 Peptidase_S37: PS-10 60.8 41 0.0009 32.4 7.7 62 74-141 84-147 (448)
49 PF00326 Peptidase_S9: Prolyl 60.6 10 0.00022 31.8 3.4 116 105-226 42-176 (213)
50 PF08386 Abhydrolase_4: TAP-li 59.8 9.8 0.00021 28.8 2.9 29 194-222 34-62 (103)
51 PF01764 Lipase_3: Lipase (cla 59.6 11 0.00023 29.2 3.2 39 106-147 45-83 (140)
52 PF11288 DUF3089: Protein of u 59.0 7.9 0.00017 33.6 2.5 40 106-147 75-114 (207)
53 PRK11126 2-succinyl-6-hydroxy- 57.9 12 0.00027 31.4 3.5 57 78-147 27-85 (242)
54 PLN02679 hydrolase, alpha/beta 57.6 15 0.00033 33.8 4.3 53 78-141 114-168 (360)
55 TIGR01250 pro_imino_pep_2 prol 57.5 12 0.00026 31.6 3.4 61 78-147 53-115 (288)
56 PF00326 Peptidase_S9: Prolyl 57.1 5.4 0.00012 33.5 1.1 25 178-202 155-184 (213)
57 TIGR03101 hydr2_PEP hydrolase, 57.0 35 0.00076 30.5 6.4 108 33-147 9-118 (266)
58 PLN02578 hydrolase 54.7 12 0.00026 34.3 3.2 59 76-146 110-170 (354)
59 TIGR03343 biphenyl_bphD 2-hydr 54.7 14 0.0003 31.8 3.4 28 193-220 222-249 (282)
60 TIGR00976 /NonD putative hydro 52.9 27 0.00058 34.3 5.4 101 33-142 6-111 (550)
61 PLN02571 triacylglycerol lipas 52.1 11 0.00024 36.1 2.4 44 103-147 202-245 (413)
62 PRK14875 acetoin dehydrogenase 51.9 17 0.00037 32.9 3.6 59 79-147 158-216 (371)
63 COG3509 LpqC Poly(3-hydroxybut 51.4 25 0.00053 32.4 4.4 167 33-221 44-235 (312)
64 COG0400 Predicted esterase [Ge 51.4 18 0.00038 31.3 3.4 111 103-233 75-185 (207)
65 cd00519 Lipase_3 Lipase (class 51.0 9.7 0.00021 32.6 1.8 36 109-147 112-147 (229)
66 KOG4391 Predicted alpha/beta h 49.8 84 0.0018 28.0 7.3 29 119-147 140-168 (300)
67 KOG4178 Soluble epoxide hydrol 49.2 1.4E+02 0.003 27.8 9.0 112 1-139 1-124 (322)
68 TIGR01738 bioH putative pimelo 49.1 11 0.00025 30.7 1.9 29 193-221 187-215 (245)
69 PLN02894 hydrolase, alpha/beta 48.5 19 0.00041 34.0 3.4 64 76-146 129-194 (402)
70 PF03583 LIP: Secretory lipase 47.3 19 0.00042 32.4 3.2 31 194-224 219-249 (290)
71 PRK03592 haloalkane dehalogena 46.3 22 0.00047 31.2 3.3 59 77-147 52-112 (295)
72 PLN02211 methyl indole-3-aceta 45.8 16 0.00034 32.3 2.4 28 194-221 211-238 (273)
73 PF12695 Abhydrolase_5: Alpha/ 44.4 23 0.00051 26.9 2.9 73 126-221 59-131 (145)
74 PRK10749 lysophospholipase L2; 44.2 18 0.00038 32.8 2.4 28 194-221 259-286 (330)
75 PRK10349 carboxylesterase BioH 42.8 22 0.00048 30.3 2.8 53 77-146 38-92 (256)
76 PLN02934 triacylglycerol lipas 42.6 27 0.00058 34.4 3.5 36 109-147 305-340 (515)
77 PRK13604 luxD acyl transferase 42.3 33 0.00073 31.5 3.9 181 32-221 18-229 (307)
78 PF07519 Tannase: Tannase and 41.6 32 0.00069 33.5 3.9 39 182-220 341-379 (474)
79 PRK05855 short chain dehydroge 41.6 40 0.00086 32.4 4.6 56 77-141 50-107 (582)
80 COG4099 Predicted peptidase [G 41.1 1.8E+02 0.0039 27.1 8.3 164 31-220 169-341 (387)
81 KOG1515 Arylacetamide deacetyl 40.7 87 0.0019 29.2 6.4 110 32-148 70-187 (336)
82 PF06500 DUF1100: Alpha/beta h 40.0 8.6 0.00019 36.8 -0.3 40 109-148 242-281 (411)
83 PLN02162 triacylglycerol lipas 39.5 27 0.0006 34.0 3.0 36 109-147 262-297 (475)
84 PLN03087 BODYGUARD 1 domain co 39.4 1.1E+02 0.0024 29.9 7.2 111 11-146 167-292 (481)
85 PLN00413 triacylglycerol lipas 39.0 24 0.00053 34.4 2.6 36 109-147 268-303 (479)
86 PLN02408 phospholipase A1 38.6 32 0.0007 32.4 3.3 42 105-147 178-219 (365)
87 PF10081 Abhydrolase_9: Alpha/ 37.8 50 0.0011 30.1 4.2 38 103-140 84-121 (289)
88 PF01738 DLH: Dienelactone hyd 37.7 29 0.00064 29.1 2.7 96 106-221 77-172 (218)
89 PF00151 Lipase: Lipase; Inte 37.3 11 0.00025 34.8 0.1 66 77-148 103-171 (331)
90 PLN02753 triacylglycerol lipas 36.8 39 0.00084 33.5 3.6 46 102-147 284-331 (531)
91 PLN02324 triacylglycerol lipas 36.1 43 0.00093 32.2 3.7 44 103-147 191-234 (415)
92 PLN02719 triacylglycerol lipas 35.4 24 0.00051 34.8 1.9 46 103-148 271-319 (518)
93 PRK08775 homoserine O-acetyltr 35.2 42 0.00092 30.5 3.5 58 76-146 97-156 (343)
94 TIGR02427 protocat_pcaD 3-oxoa 34.1 60 0.0013 26.4 4.0 58 78-147 39-98 (251)
95 PLN02847 triacylglycerol lipas 33.7 39 0.00084 34.0 3.1 47 99-148 221-272 (633)
96 PF06259 Abhydrolase_8: Alpha/ 33.3 65 0.0014 27.1 4.0 36 105-142 88-123 (177)
97 COG3208 GrsT Predicted thioest 33.1 40 0.00087 30.0 2.8 109 102-219 54-201 (244)
98 TIGR03611 RutD pyrimidine util 31.3 49 0.0011 27.3 3.0 28 194-221 198-225 (257)
99 PRK06489 hypothetical protein; 31.2 65 0.0014 29.5 4.0 80 55-146 67-172 (360)
100 PF08060 NOSIC: NOSIC (NUC001) 31.1 49 0.0011 22.1 2.4 23 104-126 12-35 (53)
101 cd01427 HAD_like Haloacid deha 30.8 1.2E+02 0.0025 22.2 4.8 39 179-222 25-63 (139)
102 PF05057 DUF676: Putative seri 30.3 42 0.00092 28.7 2.5 41 103-144 54-94 (217)
103 PF06028 DUF915: Alpha/beta hy 30.0 49 0.0011 29.5 2.9 125 103-232 81-227 (255)
104 PF11187 DUF2974: Protein of u 29.9 46 0.001 29.0 2.7 34 110-147 70-103 (224)
105 KOG4569 Predicted lipase [Lipi 29.8 26 0.00056 32.4 1.1 37 109-148 155-192 (336)
106 PRK10749 lysophospholipase L2; 29.4 49 0.0011 29.9 2.9 100 33-143 40-146 (330)
107 KOG1838 Alpha/beta hydrolase [ 29.2 46 0.001 31.9 2.7 31 109-142 182-212 (409)
108 TIGR03100 hydr1_PEP hydrolase, 28.5 1.2E+02 0.0025 26.7 5.1 57 79-142 58-114 (274)
109 COG4425 Predicted membrane pro 28.3 77 0.0017 31.0 4.0 38 103-140 372-409 (588)
110 PF07819 PGAP1: PGAP1-like pro 28.0 83 0.0018 27.2 4.0 38 103-140 58-97 (225)
111 PLN02802 triacylglycerol lipas 27.9 56 0.0012 32.2 3.1 42 106-148 309-351 (509)
112 PF02230 Abhydrolase_2: Phosph 27.8 60 0.0013 27.3 3.0 28 194-221 155-182 (216)
113 PRK11460 putative hydrolase; P 27.5 63 0.0014 27.8 3.1 29 193-221 147-175 (232)
114 KOG2182 Hydrolytic enzymes of 27.3 87 0.0019 30.8 4.2 41 102-142 146-186 (514)
115 PF05990 DUF900: Alpha/beta hy 26.4 82 0.0018 27.4 3.6 97 104-209 68-168 (233)
116 PLN02761 lipase class 3 family 26.4 76 0.0016 31.4 3.7 45 103-147 266-313 (527)
117 KOG3975 Uncharacterized conser 25.7 1.2E+02 0.0025 27.6 4.4 36 102-142 89-124 (301)
118 PF00975 Thioesterase: Thioest 25.5 45 0.00097 27.9 1.8 41 102-148 46-87 (229)
119 TIGR01680 Veg_Stor_Prot vegeta 25.5 93 0.002 28.2 3.8 44 179-224 146-189 (275)
120 PLN02652 hydrolase; alpha/beta 25.1 69 0.0015 30.2 3.1 28 194-221 324-351 (395)
121 PLN03037 lipase class 3 family 24.8 67 0.0014 31.8 3.0 43 105-147 294-337 (525)
122 TIGR01675 plant-AP plant acid 24.3 1.1E+02 0.0025 26.8 4.1 44 179-224 121-164 (229)
123 PLN02733 phosphatidylcholine-s 24.0 93 0.002 30.0 3.8 37 105-144 142-178 (440)
124 PLN02310 triacylglycerol lipas 23.7 72 0.0016 30.6 2.9 45 103-147 183-228 (405)
125 PRK04940 hypothetical protein; 23.4 1.6E+02 0.0034 25.0 4.6 75 128-215 60-145 (180)
126 PLN02511 hydrolase 23.4 84 0.0018 29.4 3.3 57 77-141 128-186 (388)
127 TIGR01738 bioH putative pimelo 23.4 1.1E+02 0.0024 24.7 3.7 52 78-146 30-83 (245)
128 TIGR01689 EcbF-BcbF capsule bi 22.8 2.1E+02 0.0045 22.6 5.0 44 182-225 28-81 (126)
129 PLN02872 triacylglycerol lipas 22.5 84 0.0018 29.8 3.2 28 194-221 325-352 (395)
130 PF05414 DUF1717: Viral domain 22.4 56 0.0012 24.4 1.5 12 193-204 39-50 (101)
131 PF03767 Acid_phosphat_B: HAD 21.7 1.5E+02 0.0032 25.8 4.3 43 180-224 117-159 (229)
132 TIGR03056 bchO_mg_che_rel puta 21.3 94 0.002 26.2 3.0 28 194-221 220-247 (278)
133 KOG2183 Prolylcarboxypeptidase 21.3 1E+02 0.0022 29.9 3.3 62 78-142 111-181 (492)
134 PLN00021 chlorophyllase 20.7 61 0.0013 29.6 1.8 40 107-146 101-144 (313)
135 PF12697 Abhydrolase_6: Alpha/ 20.7 1.6E+02 0.0034 23.2 4.1 29 192-220 174-202 (228)
136 COG4757 Predicted alpha/beta h 20.5 1E+02 0.0022 27.7 3.0 36 184-219 205-241 (281)
137 COG0429 Predicted hydrolase of 20.1 1.2E+02 0.0025 28.5 3.4 30 109-141 132-161 (345)
138 KOG3724 Negative regulator of 20.0 1.3E+02 0.0028 31.6 4.0 71 54-141 116-195 (973)
No 1
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=100.00 E-value=6.5e-71 Score=520.06 Aligned_cols=242 Identities=34% Similarity=0.621 Sum_probs=226.1
Q ss_pred ccccccCCCCCCCCCcceEEeEEEecCCCCceEEEEEEEeC-CCCCCccee---------------cccCCeeeeCCCCc
Q 042137 4 IKLKGFYLGQPNGGEIDQHSGYVTVDAKAGRALFYYFVESA-NSSTEPLSL---------------AELGPYPVNTDGKC 67 (253)
Q Consensus 4 ~~~v~~lPg~~~~~~~~~ysGyi~v~~~~~~~lFywf~es~-~p~~~Plil---------------~E~GP~~~~~~~~~ 67 (253)
.++|++|||++.+++++||||||+|+++.+++|||||+||+ +|+++|||| .|+|||+++.||.+
T Consensus 27 ~~~I~~LPG~~~~~~f~~ysGYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~G~~~E~GPf~v~~~G~t 106 (454)
T KOG1282|consen 27 ADLIKSLPGQPGPLPFKQYSGYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLGGLFEENGPFRVKYNGKT 106 (454)
T ss_pred hhhhhcCCCCCCCCCcccccceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchhhhhhhcCCeEEcCCCCc
Confidence 47899999999888999999999999888999999999999 999999999 89999999999999
Q ss_pred cccCCCCcccCcCceeeec-----cccccccCCccccccCChHHHHHHHHHHHHHHHHhCccccCCceEEEeeccCCCcc
Q 042137 68 LSHSKYARNSVKYFIMCSS-----WSLQQELDFPTRIHHLTMTRTAEDSYTLLVNWFERLPEYRAREFFLAGESYAGHFV 142 (253)
Q Consensus 68 l~~n~~sW~~~anlLfiDq-----fSy~~~~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~Yv 142 (253)
|..||||||+.|||||||| |||+ +++.++. ++++.+|+|++.||++||++||||++|||||+|||||||||
T Consensus 107 L~~N~ySWnk~aNiLfLd~PvGvGFSYs---~~~~~~~-~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YV 182 (454)
T KOG1282|consen 107 LYLNPYSWNKEANILFLDQPVGVGFSYS---NTSSDYK-TGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYV 182 (454)
T ss_pred ceeCCccccccccEEEEecCCcCCcccc---CCCCcCc-CCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceeh
Confidence 9999999999999999999 9999 7777776 59999999999999999999999999999999999999999
Q ss_pred ccccc-c---Cc-----cc-------------------------------------------------------------
Q 042137 143 PQACS-I---DP-----SI------------------------------------------------------------- 152 (253)
Q Consensus 143 P~la~-i---N~-----~I------------------------------------------------------------- 152 (253)
|+||+ | |+ .|
T Consensus 183 P~La~~I~~~N~~~~~~~iNLkG~~IGNg~td~~~~~~~~~~~a~~h~liSde~~~~l~~~C~~~~~~~~~~~~~~~~C~ 262 (454)
T KOG1282|consen 183 PALAQEILKGNKKCCKPNINLKGYAIGNGLTDPEIDYNGRIPFAWGHGLISDELYESLKRACDFSSDNYANVDPSNTKCN 262 (454)
T ss_pred HHHHHHHHhccccccCCcccceEEEecCcccCccccccchhhhhhhcccCCHHHHHHHHHHhccCcccccccCCchhHHH
Confidence 99999 8 52 22
Q ss_pred -----------------------------------------------------cHHHHhhhC---CC--CCCcCChhhhh
Q 042137 153 -----------------------------------------------------QQDFQSNFH---QF--KRPSCDISVSD 174 (253)
Q Consensus 153 -----------------------------------------------------~~~V~~aL~---~~--~w~~cs~~v~~ 174 (253)
+++||+||| .. +|+.||+.|..
T Consensus 263 ~~~~~~~~~~~~~i~~y~i~~~~C~~~~~~~~~~~~~~~~~~c~~~~~~~ylN~~~VrkALh~~~~~~~~W~~Cn~~v~~ 342 (454)
T KOG1282|consen 263 KAVEEFDSKTTGDIDNYYILTPDCYPTSYELKKPTDCYGYDPCLSDYAEKYLNRPEVRKALHANKTSIGKWERCNDEVNY 342 (454)
T ss_pred HHHHHHHHHHhccCchhhhcchhhccccccccccccccccCCchhhhHHHhcCCHHHHHHhCCCCCCCCcccccChhhhc
Confidence 689999999 22 69999999988
Q ss_pred hccCCCCChHHHHHHHHHcC-CeEEEEecCCccccCchhHHHHHHHhCCCCccceeecccC-CeeeeEEEEecCCccc
Q 042137 175 TLKDSPLTVLPIIQELMRCG-IRVYICSGDSDGRVPTTSKRHSINKLGALVNTTWYPWHSQ-GEMESFHLKQEARESI 250 (253)
Q Consensus 175 ~~~d~~~~~~~~l~~LL~~g-irVLiY~Gd~D~i~n~~g~~~wi~~l~w~~~~~~~~w~~~-~qvaGy~~~y~n~~~~ 250 (253)
.+.+...+++|.+..++.++ +|||||+||.|++||++||++||++|+++.+.+|+||+++ +|||||+++|+| ++|
T Consensus 343 ~~~~~~~sm~p~~~~~~~~~~~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~-ltf 419 (454)
T KOG1282|consen 343 NYNDDIKSMLPIHKKLIASGGYRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGG-LTF 419 (454)
T ss_pred ccccCccchHHHHHHHhhcCceEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecC-EEE
Confidence 88888999999999999865 9999999999999999999999999999999999999995 899999999999 664
No 2
>PLN02209 serine carboxypeptidase
Probab=100.00 E-value=5.8e-62 Score=460.95 Aligned_cols=239 Identities=21% Similarity=0.416 Sum_probs=208.7
Q ss_pred ccccccCCCCCCCCCcceEEeEEEecCCCCceEEEEEEEeC-CCCCCccee---------------cccCCeeeeCCC--
Q 042137 4 IKLKGFYLGQPNGGEIDQHSGYVTVDAKAGRALFYYFVESA-NSSTEPLSL---------------AELGPYPVNTDG-- 65 (253)
Q Consensus 4 ~~~v~~lPg~~~~~~~~~ysGyi~v~~~~~~~lFywf~es~-~p~~~Plil---------------~E~GP~~~~~~~-- 65 (253)
.|+|++|||+...+++++|||||+|++..+++||||||||+ +|+++|||| .|+|||+++.++
T Consensus 22 ~~~v~~lpg~~~~~~~~~~sGy~~v~~~~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~ 101 (437)
T PLN02209 22 GSIVKFLPGFKGPLPFELETGYIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYN 101 (437)
T ss_pred cCeeecCCCCCCCCCeeEEEEEEEecCCCCeEEEEEEEecCCCCCCCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCC
Confidence 47899999998778999999999998777899999999999 999999999 999999998763
Q ss_pred ---CccccCCCCcccCcCceeeec-----cccccccCCccccccCChHHHHHHHHHHHHHHHHhCccccCCceEEEeecc
Q 042137 66 ---KCLSHSKYARNSVKYFIMCSS-----WSLQQELDFPTRIHHLTMTRTAEDSYTLLVNWFERLPEYRAREFFLAGESY 137 (253)
Q Consensus 66 ---~~l~~n~~sW~~~anlLfiDq-----fSy~~~~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~~i~GESY 137 (253)
.++.+||+||++.|||||||| |||+ .++.... +++++|+++++||+.||++||+|+++|+||+||||
T Consensus 102 ~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~---~~~~~~~--~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESY 176 (437)
T PLN02209 102 GSVPSLVSTTYSWTKTANIIFLDQPVGSGFSYS---KTPIERT--SDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSY 176 (437)
T ss_pred CCcccceeCCCchhhcCcEEEecCCCCCCccCC---CCCCCcc--CCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCc
Confidence 378999999999999999999 9998 5444443 56677899999999999999999999999999999
Q ss_pred CCCccccccc-c---Cc-----cc--------------------------------------------------------
Q 042137 138 AGHFVPQACS-I---DP-----SI-------------------------------------------------------- 152 (253)
Q Consensus 138 aG~YvP~la~-i---N~-----~I-------------------------------------------------------- 152 (253)
||||||.+|. | |. +|
T Consensus 177 aG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td~~~q~~~~~~y~~~~glI~~~~~~~~~~~c~~~~~~~~~~~~~ 256 (437)
T PLN02209 177 SGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITHIEFEQNFRIPYAHGMSLISDELYESLKRICKGNYFSVDPSNKK 256 (437)
T ss_pred CceehHHHHHHHHhhcccccCCceeeeeEEecCcccChhhhhhhHHHHHhccCCCCHHHHHHHHHhcccccccCCCChHH
Confidence 9999999999 7 41 22
Q ss_pred --------------------------------------------------cHHHHhhhC-C----CCCCcCChhhhhhcc
Q 042137 153 --------------------------------------------------QQDFQSNFH-Q----FKRPSCDISVSDTLK 177 (253)
Q Consensus 153 --------------------------------------------------~~~V~~aL~-~----~~w~~cs~~v~~~~~ 177 (253)
+++||+||| . ..|..|+..+ .+.
T Consensus 257 C~~~i~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~~~~w~~~~~~~--~~~ 334 (437)
T PLN02209 257 CLKLVEEYHKCTDNINSHHTLIANCDDSNTQHISPDCYYYPYHLVECWANNESVREALHVDKGSIGEWIRDHRGI--PYK 334 (437)
T ss_pred HHHHHHHHHHHhhcCCccccccccccccccccCCCCcccccHHHHHHHhCCHHHHHHhCCCCCCCCCCccccchh--hcc
Confidence 678999999 2 3699998755 344
Q ss_pred -CCCCChHHHHHHHHHcCCeEEEEecCCccccCchhHHHHHHHhCCCCccceeecccCCeeeeEEEEecCCccc
Q 042137 178 -DSPLTVLPIIQELMRCGIRVYICSGDSDGRVPTTSKRHSINKLGALVNTTWYPWHSQGEMESFHLKQEARESI 250 (253)
Q Consensus 178 -d~~~~~~~~l~~LL~~girVLiY~Gd~D~i~n~~g~~~wi~~l~w~~~~~~~~w~~~~qvaGy~~~y~n~~~~ 250 (253)
|.+ ++++.+-.+|.+|+|||||+||.|++||++|+++|+++|+|+++++|++|++++|+|||+|+|+|++||
T Consensus 335 ~d~~-~~~~~~~~~l~~girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltf 407 (437)
T PLN02209 335 SDIR-SSIPYHMNNSINGYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTF 407 (437)
T ss_pred cchh-hhHHHHHHHHhcCceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEE
Confidence 555 444544455567999999999999999999999999999999999999999999999999999988887
No 3
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=100.00 E-value=5.1e-62 Score=454.76 Aligned_cols=235 Identities=30% Similarity=0.528 Sum_probs=199.8
Q ss_pred CCCCCCCCcceEEeEEEecCCCCceEEEEEEEeC-CCCCCccee---------------cccCCeeeeCCC-CccccCCC
Q 042137 11 LGQPNGGEIDQHSGYVTVDAKAGRALFYYFVESA-NSSTEPLSL---------------AELGPYPVNTDG-KCLSHSKY 73 (253)
Q Consensus 11 Pg~~~~~~~~~ysGyi~v~~~~~~~lFywf~es~-~p~~~Plil---------------~E~GP~~~~~~~-~~l~~n~~ 73 (253)
||++..+++++|||||+|+++.+++||||||||+ +|+++|||| .|+|||+++.++ .++..||+
T Consensus 1 pg~~~~~~~~~~sGyl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~ 80 (415)
T PF00450_consen 1 PGLDEPVPFKQYSGYLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPY 80 (415)
T ss_dssp TT-SS-SSSEEEEEEEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT
T ss_pred CCCCCCCCceEEEEEEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceeccccccccccCceEEeeccccccccccc
Confidence 8998888999999999999777899999999999 899999999 999999999543 68999999
Q ss_pred CcccCcCceeeec-----cccccccCCccccccCChHHHHHHHHHHHHHHHHhCccccCCceEEEeeccCCCccccccc-
Q 042137 74 ARNSVKYFIMCSS-----WSLQQELDFPTRIHHLTMTRTAEDSYTLLVNWFERLPEYRAREFFLAGESYAGHFVPQACS- 147 (253)
Q Consensus 74 sW~~~anlLfiDq-----fSy~~~~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~YvP~la~- 147 (253)
||++.|||||||| |||+ .+..++. .+++++|+++++||++||.+||+++++|+||+||||||+|||.+|.
T Consensus 81 sW~~~an~l~iD~PvGtGfS~~---~~~~~~~-~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~ 156 (415)
T PF00450_consen 81 SWNKFANLLFIDQPVGTGFSYG---NDPSDYV-WNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASY 156 (415)
T ss_dssp -GGGTSEEEEE--STTSTT-EE---SSGGGGS--SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHH
T ss_pred ccccccceEEEeecCceEEeec---ccccccc-chhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHh
Confidence 9999999999998 9999 6665566 5999999999999999999999999999999999999999999999
Q ss_pred c---Cc-----cc-------------------------------------------------------------------
Q 042137 148 I---DP-----SI------------------------------------------------------------------- 152 (253)
Q Consensus 148 i---N~-----~I------------------------------------------------------------------- 152 (253)
| |. .|
T Consensus 157 i~~~~~~~~~~~inLkGi~IGng~~dp~~~~~s~~~~~~~~gli~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~ 236 (415)
T PF00450_consen 157 ILQQNKKGDQPKINLKGIAIGNGWIDPRIQYNSYADYAYYHGLIDDQQYDDLNKACEACPQCQKAITECAAALDELSCQY 236 (415)
T ss_dssp HHHHTCC--STTSEEEEEEEESE-SBHHHHHHHHHHHHHHTTSS-HHHHHHHHHHHTTSHSSSCCHHHHHHHHHHHHHHC
T ss_pred hhhccccccccccccccceecCccccccccceeecccccccCcccHHHHHHHHHHhhccccccchhhHHHHHHHhhhhhc
Confidence 7 41 22
Q ss_pred ---------------------------------------------cHHHHhhhC-C----CCCCcCChhh-hhhcc-CCC
Q 042137 153 ---------------------------------------------QQDFQSNFH-Q----FKRPSCDISV-SDTLK-DSP 180 (253)
Q Consensus 153 ---------------------------------------------~~~V~~aL~-~----~~w~~cs~~v-~~~~~-d~~ 180 (253)
+++||+||| + ..|+.|+..| ...+. |.+
T Consensus 237 ~~~~~~~~~n~Ydi~~~~~~~~~~~~~~~~~~~~~~~~~~~~yln~~~Vr~aL~v~~~~~~~w~~~~~~V~~~~~~~d~~ 316 (415)
T PF00450_consen 237 AISQCNGGINPYDIRQPCYNPSRSSYDNSPSNDPPDDDYLEAYLNRPDVREALHVPVDSNVNWQSCNDAVNFNWLYDDFM 316 (415)
T ss_dssp HHHHHHTTSETTSTTSEETT-SHCTTCCCCTTTTTCHHHHHHHHTSHHHHHHTT-STTTSSS--SB-HHHHHHCCTCCC-
T ss_pred ccccccCCcceeeeeccccccccccccccccccccchhhHHHHhccHHHHHhhCCCcccCCcccccCccccccccccccc
Confidence 779999999 3 6899999999 43434 788
Q ss_pred CChHHHHHHHHHcCCeEEEEecCCccccCchhHHHHHHHhCCCCccceeeccc--CCeeeeEEEEecCCccc
Q 042137 181 LTVLPIIQELMRCGIRVYICSGDSDGRVPTTSKRHSINKLGALVNTTWYPWHS--QGEMESFHLKQEARESI 250 (253)
Q Consensus 181 ~~~~~~l~~LL~~girVLiY~Gd~D~i~n~~g~~~wi~~l~w~~~~~~~~w~~--~~qvaGy~~~y~n~~~~ 250 (253)
.++.+.++.||++|+|||||+||.|++||+.|+++|+++|+|+++++|++|.. +++++||+|+|+| +||
T Consensus 317 ~~~~~~l~~lL~~~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~-ltf 387 (415)
T PF00450_consen 317 PSSIPDLPELLDNGIRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGN-LTF 387 (415)
T ss_dssp SBCHHHHHHHHHTT-EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETT-EEE
T ss_pred ccchhhhhhhhhccceeEEeccCCCEEEEeccchhhhhccccCcccccccccccccccccceeEEecc-EEE
Confidence 99999999999999999999999999999999999999999999999999987 8999999999988 776
No 4
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=100.00 E-value=3.9e-61 Score=455.03 Aligned_cols=239 Identities=22% Similarity=0.430 Sum_probs=209.1
Q ss_pred ccccccCCCCCCCCCcceEEeEEEecCCCCceEEEEEEEeC-CCCCCccee---------------cccCCeeeeCC---
Q 042137 4 IKLKGFYLGQPNGGEIDQHSGYVTVDAKAGRALFYYFVESA-NSSTEPLSL---------------AELGPYPVNTD--- 64 (253)
Q Consensus 4 ~~~v~~lPg~~~~~~~~~ysGyi~v~~~~~~~lFywf~es~-~p~~~Plil---------------~E~GP~~~~~~--- 64 (253)
-+.|++|||+...+++++||||++|+++.+++||||||||+ +|+++|||| .|+|||+++.+
T Consensus 20 ~~~v~~lpg~~~~~~~~~~sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~ 99 (433)
T PLN03016 20 ASIVKFLPGFEGPLPFELETGYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFN 99 (433)
T ss_pred cCeeecCcCCCCCCCeeEEEEEEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccC
Confidence 36899999997778899999999998766899999999999 999999999 99999998643
Q ss_pred --CCccccCCCCcccCcCceeeec-----cccccccCCccccccCChHHHHHHHHHHHHHHHHhCccccCCceEEEeecc
Q 042137 65 --GKCLSHSKYARNSVKYFIMCSS-----WSLQQELDFPTRIHHLTMTRTAEDSYTLLVNWFERLPEYRAREFFLAGESY 137 (253)
Q Consensus 65 --~~~l~~n~~sW~~~anlLfiDq-----fSy~~~~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~~i~GESY 137 (253)
+.++.+|++||++.|||||||| |||+ .++.+. .++.++|+++++||+.||++||+|+++|+||+||||
T Consensus 100 ~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~---~~~~~~--~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESY 174 (433)
T PLN03016 100 GSAPSLFSTTYSWTKMANIIFLDQPVGSGFSYS---KTPIDK--TGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSY 174 (433)
T ss_pred CCCCceeeCCCchhhcCcEEEecCCCCCCccCC---CCCCCc--cCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCc
Confidence 2478999999999999999999 9998 544444 356677799999999999999999999999999999
Q ss_pred CCCccccccc-c---Cc-----cc--------------------------------------------------------
Q 042137 138 AGHFVPQACS-I---DP-----SI-------------------------------------------------------- 152 (253)
Q Consensus 138 aG~YvP~la~-i---N~-----~I-------------------------------------------------------- 152 (253)
||||||++|+ | |. .|
T Consensus 175 aG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t~~~~~~~~~~~y~~~~glI~~~~~~~i~~~c~~~~~~~~~~~~~ 254 (433)
T PLN03016 175 SGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYYNVDPSNTQ 254 (433)
T ss_pred cceehHHHHHHHHhhcccccCCcccceeeEecCCCcCchhhhhhHHHHHHhcCCCCHHHHHHHHHHhccccccCCCchHH
Confidence 9999999999 7 41 22
Q ss_pred ------------------------------------------------cHHHHhhhC-C----CCCCcCChhhhhhcc-C
Q 042137 153 ------------------------------------------------QQDFQSNFH-Q----FKRPSCDISVSDTLK-D 178 (253)
Q Consensus 153 ------------------------------------------------~~~V~~aL~-~----~~w~~cs~~v~~~~~-d 178 (253)
+++||+||| . ..|..|+..|. +. |
T Consensus 255 C~~~~~~~~~~~~~~n~yni~~~~~~~~~~~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~~~~w~~cn~~v~--~~~d 332 (433)
T PLN03016 255 CLKLTEEYHKCTAKINIHHILTPDCDVTNVTSPDCYYYPYHLIECWANDESVREALHIEKGSKGKWARCNRTIP--YNHD 332 (433)
T ss_pred HHHHHHHHHHHhcCCChhhccCCcccccccCCCcccccchHHHHHHhCCHHHHHHhCCCCCCCCCCccCCcccc--cccc
Confidence 356999999 2 47999999886 44 5
Q ss_pred CCCChHHHHHHHHHcCCeEEEEecCCccccCchhHHHHHHHhCCCCccceeecccCCeeeeEEEEecCCccc
Q 042137 179 SPLTVLPIIQELMRCGIRVYICSGDSDGRVPTTSKRHSINKLGALVNTTWYPWHSQGEMESFHLKQEARESI 250 (253)
Q Consensus 179 ~~~~~~~~l~~LL~~girVLiY~Gd~D~i~n~~g~~~wi~~l~w~~~~~~~~w~~~~qvaGy~~~y~n~~~~ 250 (253)
.+ ++++.+..++.+|+||||||||.|++||++||++|+++|+|+++++|++|.+++|++||+++|+|++||
T Consensus 333 ~~-~~~~~~~~~l~~~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltf 403 (433)
T PLN03016 333 IV-SSIPYHMNNSISGYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTF 403 (433)
T ss_pred cc-hhhHHHHHHHhcCceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEE
Confidence 54 455555566667899999999999999999999999999999999999999999999999999988887
No 5
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=100.00 E-value=2.6e-56 Score=425.77 Aligned_cols=236 Identities=24% Similarity=0.376 Sum_probs=210.5
Q ss_pred CCCCCCCCCcceEEeEEEecC-CCCceEEEEEEEeC-CCCCCccee---------------cccCCeeeeCCCCccccCC
Q 042137 10 YLGQPNGGEIDQHSGYVTVDA-KAGRALFYYFVESA-NSSTEPLSL---------------AELGPYPVNTDGKCLSHSK 72 (253)
Q Consensus 10 lPg~~~~~~~~~ysGyi~v~~-~~~~~lFywf~es~-~p~~~Plil---------------~E~GP~~~~~~~~~l~~n~ 72 (253)
+.....+.++++|||||+|++ ..+++||||||||+ +|+++|||| .|+|||+++.++.++..|+
T Consensus 36 ~~~~~~~~~~~~~sGy~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~ 115 (462)
T PTZ00472 36 SGWAPCDPSVNQWSGYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNT 115 (462)
T ss_pred CCccccCCCCcceeEEEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECC
Confidence 333345678999999999975 45789999999999 999999999 9999999999877899999
Q ss_pred CCcccCcCceeeec-----cccccccCCccccccCChHHHHHHHHHHHHHHHHhCccccCCceEEEeeccCCCccccccc
Q 042137 73 YARNSVKYFIMCSS-----WSLQQELDFPTRIHHLTMTRTAEDSYTLLVNWFERLPEYRAREFFLAGESYAGHFVPQACS 147 (253)
Q Consensus 73 ~sW~~~anlLfiDq-----fSy~~~~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~YvP~la~ 147 (253)
+||++.|||||||| |||+ ... ++. .+++++|+|+++||+.||++||+++.+|+||+||||||+|+|.+|.
T Consensus 116 ~sW~~~~~~l~iDqP~G~G~S~~---~~~-~~~-~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~ 190 (462)
T PTZ00472 116 YSWNNEAYVIYVDQPAGVGFSYA---DKA-DYD-HNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAY 190 (462)
T ss_pred cccccccCeEEEeCCCCcCcccC---CCC-CCC-CChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHH
Confidence 99999999999999 9998 433 455 5889999999999999999999999999999999999999999999
Q ss_pred -c---Cc-----cc------------------------------------------------------------------
Q 042137 148 -I---DP-----SI------------------------------------------------------------------ 152 (253)
Q Consensus 148 -i---N~-----~I------------------------------------------------------------------ 152 (253)
| |. +|
T Consensus 191 ~i~~~n~~~~~~~inLkGi~IGNg~~dp~~q~~~~~~~a~~~~~~~~~~~li~~~~~~~~~~~~~~c~~~~~~c~~~~~~ 270 (462)
T PTZ00472 191 RINMGNKKGDGLYINLAGLAVGNGLTDPYTQYASYPRLAWDWCKEKLGAPCVSEEAYDEMSSMVPACQKKIKECNSNPDD 270 (462)
T ss_pred HHHhhccccCCceeeeEEEEEeccccChhhhcccHHHHhhhcccccCCCCccCHHHHHHHHHHHHHHHHHHHhccccCCC
Confidence 7 41 11
Q ss_pred -------------------------------------------------cHHHHhhhC--CCCCCcCChhhhhhcc-CCC
Q 042137 153 -------------------------------------------------QQDFQSNFH--QFKRPSCDISVSDTLK-DSP 180 (253)
Q Consensus 153 -------------------------------------------------~~~V~~aL~--~~~w~~cs~~v~~~~~-d~~ 180 (253)
+++||+||| ...|+.|++.|+.++. |.+
T Consensus 271 ~~~~c~~a~~~c~~~~~~~~~~g~n~Ydi~~~c~~~~c~~~~~~~~yLN~~~Vq~AL~v~~~~w~~c~~~V~~~~~~D~~ 350 (462)
T PTZ00472 271 ADSSCSVARALCNEYIAVYSATGLNNYDIRKPCIGPLCYNMDNTIAFMNREDVQSSLGVKPATWQSCNMEVNLMFEMDWM 350 (462)
T ss_pred cchHHHHHHHHHHHHHHHHHhcCCChhheeccCCCCCccCHHHHHHHhCCHHHHHHhCCCCCCceeCCHHHHHHhhhccc
Confidence 678999999 5579999999998887 888
Q ss_pred CChHHHHHHHHHcCCeEEEEecCCccccCchhHHHHHHHhCCCCccce-----eec-ccCCeeeeEEEEec----CCccc
Q 042137 181 LTVLPIIQELMRCGIRVYICSGDSDGRVPTTSKRHSINKLGALVNTTW-----YPW-HSQGEMESFHLKQE----ARESI 250 (253)
Q Consensus 181 ~~~~~~l~~LL~~girVLiY~Gd~D~i~n~~g~~~wi~~l~w~~~~~~-----~~w-~~~~qvaGy~~~y~----n~~~~ 250 (253)
.++.+.++.||++|+|||||+||.|++||+.|+++|+++|+|+++++| ++| ++++++|||+|+|+ +++||
T Consensus 351 ~~~~~~l~~LL~~gikVLiYnGd~D~icn~~Gt~~wi~~L~w~g~~~f~~a~~~~w~~~~~~v~G~vk~~~~~~~~~l~~ 430 (462)
T PTZ00472 351 KNFNYTVPGLLEDGVRVMIYAGDMDFICNWIGNKAWTLALQWPGNAEFNAAPDVPFSAVDGRWAGLVRSAASNTSSGFSF 430 (462)
T ss_pred cchHHHHHHHHhcCceEEEEECCcCeecCcHhHHHHHHhCCCCCccchhhcCccccEecCCEeceEEEEEecccCCCeEE
Confidence 999999999999999999999999999999999999999999998765 799 57899999999997 25666
No 6
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=100.00 E-value=3.8e-43 Score=320.99 Aligned_cols=165 Identities=21% Similarity=0.412 Sum_probs=142.8
Q ss_pred CcCceeeec-----cccccccCCccccccCChHHHHHHHHHHHHHHHHhCccccCCceEEEeeccCCCccccccc-c---
Q 042137 78 VKYFIMCSS-----WSLQQELDFPTRIHHLTMTRTAEDSYTLLVNWFERLPEYRAREFFLAGESYAGHFVPQACS-I--- 148 (253)
Q Consensus 78 ~anlLfiDq-----fSy~~~~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~YvP~la~-i--- 148 (253)
.|||||||| |||+ +++..+ .+++++|++++.||+.||++||+|+++||||+||||||||||++|. |
T Consensus 1 ~aNvLfiDqPvGvGfSy~---~~~~~~--~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~ 75 (319)
T PLN02213 1 MANIIFLDQPVGSGFSYS---KTPIDK--TGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQG 75 (319)
T ss_pred CccEEEecCCCCCCCCCC---CCCCCc--cccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhh
Confidence 489999999 9998 554444 3666777999999999999999999999999999999999999999 8
Q ss_pred Cc-----cc-----------------------------------------------------------------------
Q 042137 149 DP-----SI----------------------------------------------------------------------- 152 (253)
Q Consensus 149 N~-----~I----------------------------------------------------------------------- 152 (253)
|. .|
T Consensus 76 n~~~~~~~inLkGi~IGNg~t~~~~~~~~~~~~~~~~gli~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~ 155 (319)
T PLN02213 76 NYICCEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYYNVDPSNTQCLKLTEEYHKCTAKI 155 (319)
T ss_pred cccccCCceeeeEEEeCCCCCCccccchhHhhHHHhcCCCCHHHHHHHHHhcCCCccCCCCCcHHHHHHHHHHHHHHhcC
Confidence 41 22
Q ss_pred ---------------------------------cHHHHhhhC-C----CCCCcCChhhhhhcc-CCCCChHHHHHHHHHc
Q 042137 153 ---------------------------------QQDFQSNFH-Q----FKRPSCDISVSDTLK-DSPLTVLPIIQELMRC 193 (253)
Q Consensus 153 ---------------------------------~~~V~~aL~-~----~~w~~cs~~v~~~~~-d~~~~~~~~l~~LL~~ 193 (253)
+++||+||| . ..|+.|+..|. +. |.+ +.++.+..+|.+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~~~~w~~c~~~v~--~~~d~~-~~~~~~~~~l~~ 232 (319)
T PLN02213 156 NIHHILTPDCDVTNVTSPDCYYYPYHLIECWANDESVREALHIEKGSKGKWARCNRTIP--YNHDIV-SSIPYHMNNSIS 232 (319)
T ss_pred CHhhcccCcccCccCCCCCcccchhHHHHHHhCCHHHHHHhCcCCCCCCCCccCCcccc--cccccc-cchHHHHHHHhc
Confidence 467999999 2 47999999886 44 554 455555556667
Q ss_pred CCeEEEEecCCccccCchhHHHHHHHhCCCCccceeecccCCeeeeEEEEecCCccc
Q 042137 194 GIRVYICSGDSDGRVPTTSKRHSINKLGALVNTTWYPWHSQGEMESFHLKQEARESI 250 (253)
Q Consensus 194 girVLiY~Gd~D~i~n~~g~~~wi~~l~w~~~~~~~~w~~~~qvaGy~~~y~n~~~~ 250 (253)
|+||||||||.|++||++|+++|+++|+|+++++|++|++++|++||+|+|+|++||
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf 289 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTF 289 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceE
Confidence 899999999999999999999999999999999999999999999999999988887
No 7
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4e-40 Score=293.64 Aligned_cols=219 Identities=21% Similarity=0.309 Sum_probs=194.1
Q ss_pred eEEeEEEecCCCCceEEEEEEEeC--CCCCCccee----------------cccCCeeeeCCCCccccCCCCcccCcCce
Q 042137 21 QHSGYVTVDAKAGRALFYYFVESA--NSSTEPLSL----------------AELGPYPVNTDGKCLSHSKYARNSVKYFI 82 (253)
Q Consensus 21 ~ysGyi~v~~~~~~~lFywf~es~--~p~~~Plil----------------~E~GP~~~~~~~~~l~~n~~sW~~~anlL 82 (253)
.-+||++|+. ++++|||+|.+. ....+|+.| .|+||+.++ +++|+.+|-+.|+||
T Consensus 3 ~~wg~v~vr~--~a~~F~wly~~~~~~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~-----~~~r~~TWlk~adll 75 (414)
T KOG1283|consen 3 EDWGYVDVRT--GAHMFWWLYYATANVKSERPLALWLQGGPGASSTGFGNFEELGPLDLD-----GSPRDWTWLKDADLL 75 (414)
T ss_pred ccccceeeec--CceEEEEEeeeccccccCCCeeEEecCCCCCCCcCccchhhcCCcccC-----CCcCCchhhhhccEE
Confidence 4589999985 799999999998 447889999 999999865 679999999999999
Q ss_pred eeec-----cccccccCCccccccCChHHHHHHHHHHHHHHHHhCccccCCceEEEeeccCCCccccccc-c--------
Q 042137 83 MCSS-----WSLQQELDFPTRIHHLTMTRTAEDSYTLLVNWFERLPEYRAREFFLAGESYAGHFVPQACS-I-------- 148 (253)
Q Consensus 83 fiDq-----fSy~~~~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~YvP~la~-i-------- 148 (253)
|||. |||. +..+.|. ++.+++|.|+.+.|++||..||||+.+||||+-|||||+..|.+|. +
T Consensus 76 fvDnPVGaGfSyV---dg~~~Y~-~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~ 151 (414)
T KOG1283|consen 76 FVDNPVGAGFSYV---DGSSAYT-TNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGE 151 (414)
T ss_pred EecCCCcCceeee---cCccccc-ccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCc
Confidence 9999 9999 6667787 6999999999999999999999999999999999999999999998 6
Q ss_pred ---C--------ccc-----------------------------------------------------------------
Q 042137 149 ---D--------PSI----------------------------------------------------------------- 152 (253)
Q Consensus 149 ---N--------~~I----------------------------------------------------------------- 152 (253)
| +.|
T Consensus 152 i~~nf~~VaLGDSWISP~D~V~SWGP~L~~~S~LDD~GLds~ns~A~k~~~~v~~g~~~~AT~~Wg~~e~li~~~sn~Vd 231 (414)
T KOG1283|consen 152 IKLNFIGVALGDSWISPEDFVFSWGPLLKHVSRLDDNGLDSSNSGAEKGKGGVDGGKWGGATGGWGGGENLISRESNGVD 231 (414)
T ss_pred eeecceeEEccCcccChhHhhhcchHHHHhhhhhcccCccchhhhHHhhcccccCCccccccccccCcCcceeecccCcc
Confidence 1 122
Q ss_pred -----------------------------------------------cHHHHhhhC----CCCCCcCChhhhhhcc-CCC
Q 042137 153 -----------------------------------------------QQDFQSNFH----QFKRPSCDISVSDTLK-DSP 180 (253)
Q Consensus 153 -----------------------------------------------~~~V~~aL~----~~~w~~cs~~v~~~~~-d~~ 180 (253)
...||++|+ ...|...+.+++.+++ |+|
T Consensus 232 fYNil~~t~~d~~~~ss~~~~~~~~~~rrl~~~~~~~~~~D~L~~lM~g~vrkkLgIip~~~~wGgqsg~vFt~lq~dFM 311 (414)
T KOG1283|consen 232 FYNILTKTLGDQYSLSSRAAMTPEEVMRRLLVRFVGDEDRDKLSDLMNGPVRKKLGIIPGGVKWGGQSGDVFTKLQGDFM 311 (414)
T ss_pred eeeeeccCCCcchhhhhhhhcchHHHHHHHHhccCcchhHHHHHHHhcccccccccccCCCCcccCcCCchHHHhhhhhc
Confidence 234667777 5689999999999988 999
Q ss_pred CChHHHHHHHHHcCCeEEEEecCCccccCchhHHHHHHHhCCCCcccee--ecc---cCCeeeeEEEEecCCccc
Q 042137 181 LTVLPIIQELMRCGIRVYICSGDSDGRVPTTSKRHSINKLGALVNTTWY--PWH---SQGEMESFHLKQEARESI 250 (253)
Q Consensus 181 ~~~~~~l~~LL~~girVLiY~Gd~D~i~n~~g~~~wi~~l~w~~~~~~~--~w~---~~~qvaGy~~~y~n~~~~ 250 (253)
+|++..+.+||++|++|.||||++|.||++.|+++|+.+|.|++...+. +|+ ++-..+||.|.|+|+-.|
T Consensus 312 KPvi~~VdeLL~~Gv~V~VynG~lDlIc~T~G~~AWv~~l~w~~~p~f~~~~r~~~~~s~~l~gy~ktyknl~f~ 386 (414)
T KOG1283|consen 312 KPVISKVDELLNNGVNVTVYNGQLDLICATMGTEAWVEKLEWSAKPSFQVSPRVGITVSRVLEGYEKTYKNLSFF 386 (414)
T ss_pred ccHHHHHHHHHhCCceEEEEecccchhhcccchhhhhhheecCCCCccccceeeeccceeecchhhhhhccceeE
Confidence 9999999999999999999999999999999999999999999998874 454 456899999999996543
No 8
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=100.00 E-value=1.4e-34 Score=272.37 Aligned_cols=220 Identities=19% Similarity=0.262 Sum_probs=181.2
Q ss_pred CCcceEEeEEEecCCCCceEEEEEEEeC-CCCCCccee---------------cccCCeeeeCCCCccc--cCCCCcccC
Q 042137 17 GEIDQHSGYVTVDAKAGRALFYYFVESA-NSSTEPLSL---------------AELGPYPVNTDGKCLS--HSKYARNSV 78 (253)
Q Consensus 17 ~~~~~ysGyi~v~~~~~~~lFywf~es~-~p~~~Plil---------------~E~GP~~~~~~~~~l~--~n~~sW~~~ 78 (253)
.++++|+||.+..+ .+|||+|+++ +|.++|+|+ .|+||.+|+.+- +.. .||+||+++
T Consensus 72 lpv~~~~g~~d~ed----~~ffy~fe~~ndp~~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~-~P~~~~NP~SW~~~ 146 (498)
T COG2939 72 LPVRDYTGYPDAED----FFFFYTFESPNDPANRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGT-SPSYPDNPGSWLDF 146 (498)
T ss_pred cchhhccCCcccce----eEEEEEecCCCCCCCCceEEEecCCCChHhhhhhhhhcCCeeeeCCC-CCCCCCCccccccC
Confidence 45788888855443 3999999998 999999999 799999999882 334 499999999
Q ss_pred cCceeeec-----cccccccCCccccccCChHHHHHHHHHHHHHHHHhCccccCC--ceEEEeeccCCCccccccc-c--
Q 042137 79 KYFIMCSS-----WSLQQELDFPTRIHHLTMTRTAEDSYTLLVNWFERLPEYRAR--EFFLAGESYAGHFVPQACS-I-- 148 (253)
Q Consensus 79 anlLfiDq-----fSy~~~~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~--~~~i~GESYaG~YvP~la~-i-- 148 (253)
+||||||| ||++ ..+ ... .+...+.+|++.|++.||+.||+|.+. |+||+||||||+|+|.||+ |
T Consensus 147 adLvFiDqPvGTGfS~a---~~~-e~~-~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~ 221 (498)
T COG2939 147 ADLVFIDQPVGTGFSRA---LGD-EKK-KDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLE 221 (498)
T ss_pred CceEEEecCcccCcccc---ccc-ccc-cchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHH
Confidence 99999998 9997 322 233 478889999999999999999999887 9999999999999999999 7
Q ss_pred -C--c-------c--c----------------------------------------------------------------
Q 042137 149 -D--P-------S--I---------------------------------------------------------------- 152 (253)
Q Consensus 149 -N--~-------~--I---------------------------------------------------------------- 152 (253)
| + . |
T Consensus 222 ~~~~~~~~~nlssvligng~~t~Pl~~~~~y~~~a~~~~~~~~~l~~e~~~~~~~~~~~d~~~~l~~g~~~~~~~~~c~~ 301 (498)
T COG2939 222 DNIALNGNVNLSSVLIGNGLWTDPLTQYLTYEPIAAEKGPYDGVLSSEECTKAEKYCAGDYCLALMKGCYDSGSLQPCEN 301 (498)
T ss_pred hccccCCceEeeeeeecCCcccChhHHHHHhhhhHhhcCCCCCcCcHHHHHHHHHHhhhhhHhhhccCCCCchhhhHHHH
Confidence 2 1 0 1
Q ss_pred ---------------------------------------------------cHHHHhhhC--CCCCCcCChhhhhhc---
Q 042137 153 ---------------------------------------------------QQDFQSNFH--QFKRPSCDISVSDTL--- 176 (253)
Q Consensus 153 ---------------------------------------------------~~~V~~aL~--~~~w~~cs~~v~~~~--- 176 (253)
...+++.++ ...|..|++++..+|
T Consensus 302 ~~~~~~~~~~~~~~r~~~~~~n~y~~r~~~~d~g~~~~~y~~~~~~ld~~~~~~~~~~~~~~~d~~~~c~t~a~~~f~~~ 381 (498)
T COG2939 302 ASAYLTGLMREYVGRAGGRLLNVYDIREECRDPGLGGSCYDTLSTSLDYFNFDPEQEVNDPEVDNISGCTTDAMTDFLTF 381 (498)
T ss_pred HHHHHHhcchhhhccccccccccccchhhcCCCCcccccccceeeccccccccchhccccccccchhccchHHHHhhhhh
Confidence 234555555 457999999998887
Q ss_pred c-CCCCChHHHHHHHHHcCCeEEEEecCCccccCchhHHHHHHHhCCCCcccee-----eccc--CCeeeeEEEEecC
Q 042137 177 K-DSPLTVLPIIQELMRCGIRVYICSGDSDGRVPTTSKRHSINKLGALVNTTWY-----PWHS--QGEMESFHLKQEA 246 (253)
Q Consensus 177 ~-d~~~~~~~~l~~LL~~girVLiY~Gd~D~i~n~~g~~~wi~~l~w~~~~~~~-----~w~~--~~qvaGy~~~y~n 246 (253)
. +++.+....+..++.+++.+++|.||.|.+||+.|+++|..+|+|.++..|. +|.. ..+..|-+++|+|
T Consensus 382 ~~~~~~~~~~~~~~~lv~~~~~~~~~gd~d~icn~~~~~a~~~~Lkw~~~~g~~d~~~~~~~~~~t~e~~~~~~s~~n 459 (498)
T COG2939 382 TGGWAKPSRYLVLNLLVNNVWILLYAGDKDFICNLRGNMALDPKLKWLGASGYFDASTPFFWSRLTLEEMGGYKSYRN 459 (498)
T ss_pred cCCcccccHHHHhhhhhcCCceeeeecCchhHhhhhhhcccCCcceEeeecchhhhcCCCcccccchhhcccccccCC
Confidence 2 7888899999999999999999999999999999999999999999999883 4543 4454454567774
No 9
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=95.72 E-value=0.027 Score=56.23 Aligned_cols=180 Identities=13% Similarity=0.102 Sum_probs=96.9
Q ss_pred CCceEEEEEEEeC--CCCC-Ccceeccc-CCeeeeCCCCccccCCCC-cccCcCceeeec-cc------cccccCCcccc
Q 042137 32 AGRALFYYFVESA--NSST-EPLSLAEL-GPYPVNTDGKCLSHSKYA-RNSVKYFIMCSS-WS------LQQELDFPTRI 99 (253)
Q Consensus 32 ~~~~lFywf~es~--~p~~-~Plil~E~-GP~~~~~~~~~l~~n~~s-W~~~anlLfiDq-fS------y~~~~~~~~~~ 99 (253)
.+..+..|++... +|.+ -|+|+.=+ ||-.... .....+... ..+-+.|++++. =| |.+ ....++
T Consensus 374 dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~--~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~--~~~~~~ 449 (620)
T COG1506 374 DGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVG--YSFNPEIQVLASAGYAVLAPNYRGSTGYGREFAD--AIRGDW 449 (620)
T ss_pred CCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccc--cccchhhHHHhcCCeEEEEeCCCCCCccHHHHHH--hhhhcc
Confidence 3678999999997 5543 49999444 4622111 122222222 233355666654 11 110 000011
Q ss_pred ccCChHHHHHHHHHHHHHHHHhCccccCCceEEEeeccCCCccccccccCccccHHHHhhhC---CCCCC----cCChhh
Q 042137 100 HHLTMTRTAEDSYTLLVNWFERLPEYRAREFFLAGESYAGHFVPQACSIDPSIQQDFQSNFH---QFKRP----SCDISV 172 (253)
Q Consensus 100 ~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~YvP~la~iN~~I~~~V~~aL~---~~~w~----~cs~~v 172 (253)
-....+|+.+++. |+.+.|..-...++|+|.||||-..-.++.- .+.++.+.= ...|. .++...
T Consensus 450 ----g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~----~~~f~a~~~~~~~~~~~~~~~~~~~~~ 520 (620)
T COG1506 450 ----GGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATK----TPRFKAAVAVAGGVDWLLYFGESTEGL 520 (620)
T ss_pred ----CCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhc----CchhheEEeccCcchhhhhccccchhh
Confidence 1134678888888 8899999988899999999999755333321 112222211 01111 001000
Q ss_pred hhhc---cCC-------CCChHHHHHHHHHcCCeEEEEecCCccccCchhHHHHHHHhCCCCc
Q 042137 173 SDTL---KDS-------PLTVLPIIQELMRCGIRVYICSGDSDGRVPTTSKRHSINKLGALVN 225 (253)
Q Consensus 173 ~~~~---~d~-------~~~~~~~l~~LL~~girVLiY~Gd~D~i~n~~g~~~wi~~l~w~~~ 225 (253)
...+ ... +....| +...-+-.-++||.+|..|..|+..-++++..+|+-.|.
T Consensus 521 ~~~~~~~~~~~~~~~~~~~~~sp-~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~ 582 (620)
T COG1506 521 RFDPEENGGGPPEDREKYEDRSP-IFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGK 582 (620)
T ss_pred cCCHHHhCCCcccChHHHHhcCh-hhhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCc
Confidence 0000 000 000111 111112246899999999999999999999999987554
No 10
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=94.39 E-value=0.65 Score=41.97 Aligned_cols=113 Identities=15% Similarity=0.068 Sum_probs=63.2
Q ss_pred ceEEeEEEecCCCCceEEEEEEEeC-CCCCCcceecccCCeeeeCCCCccccCCC--Cccc-CcCceeeec--ccccccc
Q 042137 20 DQHSGYVTVDAKAGRALFYYFVESA-NSSTEPLSLAELGPYPVNTDGKCLSHSKY--ARNS-VKYFIMCSS--WSLQQEL 93 (253)
Q Consensus 20 ~~ysGyi~v~~~~~~~lFywf~es~-~p~~~Plil~E~GP~~~~~~~~~l~~n~~--sW~~-~anlLfiDq--fSy~~~~ 93 (253)
+...+++...+ +..++|+.+... .....|+|+.=+|=.. + ........ .+++ -.+|+.+|. +-.+
T Consensus 31 ~~~~~~~~~~d--g~~l~~~~~~~~~~~~~~~~VvllHG~~~---~-~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S--- 101 (330)
T PLN02298 31 KGSKSFFTSPR--GLSLFTRSWLPSSSSPPRALIFMVHGYGN---D-ISWTFQSTAIFLAQMGFACFALDLEGHGRS--- 101 (330)
T ss_pred ccccceEEcCC--CCEEEEEEEecCCCCCCceEEEEEcCCCC---C-cceehhHHHHHHHhCCCEEEEecCCCCCCC---
Confidence 34467777653 678988766543 2123466664444210 0 00111111 1333 378999999 4333
Q ss_pred CCccccccCChHHHHHHHHHHHHHHHHhCccccCCceEEEeeccCCCccc
Q 042137 94 DFPTRIHHLTMTRTAEDSYTLLVNWFERLPEYRAREFFLAGESYAGHFVP 143 (253)
Q Consensus 94 ~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~YvP 143 (253)
....+.. .+.+..++|+..+++..-. ..++...+++|.|+|.||..+-
T Consensus 102 ~~~~~~~-~~~~~~~~D~~~~i~~l~~-~~~~~~~~i~l~GhSmGG~ia~ 149 (330)
T PLN02298 102 EGLRAYV-PNVDLVVEDCLSFFNSVKQ-REEFQGLPRFLYGESMGGAICL 149 (330)
T ss_pred CCccccC-CCHHHHHHHHHHHHHHHHh-cccCCCCCEEEEEecchhHHHH
Confidence 2112222 3667778888888775543 2233345899999999998654
No 11
>PHA02857 monoglyceride lipase; Provisional
Probab=94.18 E-value=0.23 Score=43.36 Aligned_cols=29 Identities=7% Similarity=0.055 Sum_probs=26.1
Q ss_pred cCCeEEEEecCCccccCchhHHHHHHHhC
Q 042137 193 CGIRVYICSGDSDGRVPTTSKRHSINKLG 221 (253)
Q Consensus 193 ~girVLiY~Gd~D~i~n~~g~~~wi~~l~ 221 (253)
-..+|||..|+.|.+||....+.+.+++.
T Consensus 208 i~~Pvliv~G~~D~i~~~~~~~~l~~~~~ 236 (276)
T PHA02857 208 IKTPILILQGTNNEISDVSGAYYFMQHAN 236 (276)
T ss_pred CCCCEEEEecCCCCcCChHHHHHHHHHcc
Confidence 36899999999999999999999988774
No 12
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=93.83 E-value=0.25 Score=45.19 Aligned_cols=136 Identities=15% Similarity=0.103 Sum_probs=77.2
Q ss_pred ceeeec--cccccccCCccccccCChHHHHHHHHHHHHHHHHhCccccCCceEEEeeccCCCccccccc-c----C----
Q 042137 81 FIMCSS--WSLQQELDFPTRIHHLTMTRTAEDSYTLLVNWFERLPEYRAREFFLAGESYAGHFVPQACS-I----D---- 149 (253)
Q Consensus 81 lLfiDq--fSy~~~~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~YvP~la~-i----N---- 149 (253)
+-.+|+ +-.+ +.-..+. .+-+.+.+|+..|+..+ +..++++..|.|+.|||.||.-+=.++. = +
T Consensus 85 v~a~D~~GhG~S---dGl~~yi-~~~d~~v~D~~~~~~~i-~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~il 159 (313)
T KOG1455|consen 85 VYAIDYEGHGRS---DGLHAYV-PSFDLVVDDVISFFDSI-KEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAIL 159 (313)
T ss_pred EEEeeccCCCcC---CCCcccC-CcHHHHHHHHHHHHHHH-hhccccCCCCeeeeecCcchHHHHHHHhhCCccccccee
Confidence 456787 2222 2233454 48888889988877665 3567788889999999999975433332 0 1
Q ss_pred --c--cc------cHHHHhhhC-----CCCCCcCChh-hhh-hcc----------CC----CCCh----------HHHHH
Q 042137 150 --P--SI------QQDFQSNFH-----QFKRPSCDIS-VSD-TLK----------DS----PLTV----------LPIIQ 188 (253)
Q Consensus 150 --~--~I------~~~V~~aL~-----~~~w~~cs~~-v~~-~~~----------d~----~~~~----------~~~l~ 188 (253)
| +| .+-|+.+|- -.+|..-... +.+ +++ |- -.+- ...++
T Consensus 160 vaPmc~i~~~~kp~p~v~~~l~~l~~liP~wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le 239 (313)
T KOG1455|consen 160 VAPMCKISEDTKPHPPVISILTLLSKLIPTWKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLE 239 (313)
T ss_pred eecccccCCccCCCcHHHHHHHHHHHhCCceeecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHH
Confidence 1 11 233444443 2344421111 100 010 10 0111 11223
Q ss_pred HHHH-cCCeEEEEecCCccccCchhHHHHHHHhC
Q 042137 189 ELMR-CGIRVYICSGDSDGRVPTTSKRHSINKLG 221 (253)
Q Consensus 189 ~LL~-~girVLiY~Gd~D~i~n~~g~~~wi~~l~ 221 (253)
.-|+ -.++++|.+|+.|-+|...+.+...+.-.
T Consensus 240 ~~l~~vtvPflilHG~dD~VTDp~~Sk~Lye~A~ 273 (313)
T KOG1455|consen 240 KNLNEVTVPFLILHGTDDKVTDPKVSKELYEKAS 273 (313)
T ss_pred HhcccccccEEEEecCCCcccCcHHHHHHHHhcc
Confidence 3332 26899999999999999999988876543
No 13
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=92.23 E-value=0.61 Score=39.62 Aligned_cols=109 Identities=12% Similarity=0.009 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHHhCccccCCceEEEeeccCCCccccccccCccccHHHHhhhC--CCCCCcCChhhhhhccC-CCCChHH
Q 042137 109 EDSYTLLVNWFERLPEYRAREFFLAGESYAGHFVPQACSIDPSIQQDFQSNFH--QFKRPSCDISVSDTLKD-SPLTVLP 185 (253)
Q Consensus 109 ~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~YvP~la~iN~~I~~~V~~aL~--~~~w~~cs~~v~~~~~d-~~~~~~~ 185 (253)
.++.+++....++++ ....+++|+|.|.||..+-.++.- .++...++- ...-..|.......+.. .......
T Consensus 77 ~~~~~~i~~~~~~~~-id~~~i~l~G~S~Gg~~a~~~a~~----~p~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 151 (212)
T TIGR01840 77 ESLHQLIDAVKANYS-IDPNRVYVTGLSAGGGMTAVLGCT----YPDVFAGGASNAGLPYGEASSSISATPQMCTAATAA 151 (212)
T ss_pred HHHHHHHHHHHHhcC-cChhheEEEEECHHHHHHHHHHHh----CchhheEEEeecCCcccccccchhhHhhcCCCCCHH
Confidence 344444444444432 345689999999999865443320 122222221 11111121111111111 0111223
Q ss_pred HHHHHHH--------cCCeEEEEecCCccccCchhHHHHHHHhCC
Q 042137 186 IIQELMR--------CGIRVYICSGDSDGRVPTTSKRHSINKLGA 222 (253)
Q Consensus 186 ~l~~LL~--------~girVLiY~Gd~D~i~n~~g~~~wi~~l~w 222 (253)
.+.+++. ..-+++|.+|..|.+||....+...++|.-
T Consensus 152 ~~~~~~~~~~~~~~~~~p~~~i~hG~~D~vVp~~~~~~~~~~l~~ 196 (212)
T TIGR01840 152 SVCRLVRGMQSEYNGPTPIMSVVHGDADYTVLPGNADEIRDAMLK 196 (212)
T ss_pred HHHHHHhccCCcccCCCCeEEEEEcCCCceeCcchHHHHHHHHHH
Confidence 3333332 224578999999999999999998887753
No 14
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=90.84 E-value=0.45 Score=43.64 Aligned_cols=29 Identities=17% Similarity=0.138 Sum_probs=25.6
Q ss_pred CCeEEEEecCCccccCchhHHHHHHHhCC
Q 042137 194 GIRVYICSGDSDGRVPTTSKRHSINKLGA 222 (253)
Q Consensus 194 girVLiY~Gd~D~i~n~~g~~~wi~~l~w 222 (253)
.+++|+.+|+.|.+|+..+++.+.+++.-
T Consensus 270 ~~P~Lii~G~~D~vv~~~~~~~~~~~~~~ 298 (332)
T TIGR01607 270 DIPILFIHSKGDCVCSYEGTVSFYNKLSI 298 (332)
T ss_pred CCCEEEEEeCCCCccCHHHHHHHHHhccC
Confidence 47999999999999999999998887653
No 15
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=90.83 E-value=0.51 Score=41.26 Aligned_cols=102 Identities=13% Similarity=0.183 Sum_probs=56.5
Q ss_pred HHHHHHHhCccccCCceEEEeeccCCCccccccccCccccHHHHhhhC--C-CCCCcCChhhhhh---ccCCCCChH-HH
Q 042137 114 LLVNWFERLPEYRAREFFLAGESYAGHFVPQACSIDPSIQQDFQSNFH--Q-FKRPSCDISVSDT---LKDSPLTVL-PI 186 (253)
Q Consensus 114 fL~~f~~~fp~~~~~~~~i~GESYaG~YvP~la~iN~~I~~~V~~aL~--~-~~w~~cs~~v~~~---~~d~~~~~~-~~ 186 (253)
.|.+........-.+++|++|.|-||...-.++.- .||+-.|.. . ..+ .|......+ +..-..+.. ..
T Consensus 83 ~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~----~pd~faa~a~~sG~~~-~~a~~~~~a~~~m~~g~~~~p~~~ 157 (220)
T PF10503_consen 83 ALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACA----YPDLFAAVAVVSGVPY-GCAASGASALSAMRSGPRPAPAAA 157 (220)
T ss_pred HHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHh----CCccceEEEeeccccc-ccccCcccHHHHhhCCCCCChHHH
Confidence 33333344445667899999999999887666641 245555544 1 112 222111111 111111111 11
Q ss_pred HHHHHH----cCCeEEEEecCCccccCchhHHHHHHHh
Q 042137 187 IQELMR----CGIRVYICSGDSDGRVPTTSKRHSINKL 220 (253)
Q Consensus 187 l~~LL~----~girVLiY~Gd~D~i~n~~g~~~wi~~l 220 (253)
...... .+++++|++|+.|..|+....++.++++
T Consensus 158 ~~a~~~~g~~~~~P~~v~hG~~D~tV~~~n~~~~~~q~ 195 (220)
T PF10503_consen 158 WGARSDAGAYPGYPRIVFHGTADTTVNPQNADQLVAQW 195 (220)
T ss_pred HHhhhhccCCCCCCEEEEecCCCCccCcchHHHHHHHH
Confidence 111111 3689999999999999999887777643
No 16
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=90.20 E-value=0.28 Score=46.16 Aligned_cols=180 Identities=13% Similarity=0.150 Sum_probs=91.5
Q ss_pred eEEEEEEEe--C-CCCCCcceecccC-CeeeeCCC--CccccCCCCcccCcCceeeeccccccccCCccccccCChHHHH
Q 042137 35 ALFYYFVES--A-NSSTEPLSLAELG-PYPVNTDG--KCLSHSKYARNSVKYFIMCSSWSLQQELDFPTRIHHLTMTRTA 108 (253)
Q Consensus 35 ~lFywf~es--~-~p~~~Plil~E~G-P~~~~~~~--~~l~~n~~sW~~~anlLfiDqfSy~~~~~~~~~~~~~~~~~~a 108 (253)
+-.||++++ + +|++||+||.=+| =|.+...- ...-.+-+..-....+|.+| ||-+.....+..+++ +-
T Consensus 105 ~~s~Wlvk~P~~~~pk~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~~~SILvLD-YsLt~~~~~~~~yPt--QL--- 178 (374)
T PF10340_consen 105 SQSYWLVKAPNRFKPKSDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLPEVSILVLD-YSLTSSDEHGHKYPT--QL--- 178 (374)
T ss_pred cceEEEEeCCcccCCCCCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcCCCeEEEEe-ccccccccCCCcCch--HH---
Confidence 345999995 3 6888999993333 22222110 00011111111233889998 554410013344653 21
Q ss_pred HHHHHHHHHHHHhCccccCCceEEEeeccCCCccccccc-c---C----cc----ccHHHHhhh---------C-CCCCC
Q 042137 109 EDSYTLLVNWFERLPEYRAREFFLAGESYAGHFVPQACS-I---D----PS----IQQDFQSNF---------H-QFKRP 166 (253)
Q Consensus 109 ~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~YvP~la~-i---N----~~----I~~~V~~aL---------~-~~~w~ 166 (253)
.++.+..+...+. --...+.|.|+|-||+-+-.+.. + | |+ |.|.|+-.- + +.++.
T Consensus 179 ~qlv~~Y~~Lv~~---~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~~~~~~~~~~~~~n~~~D 255 (374)
T PF10340_consen 179 RQLVATYDYLVES---EGNKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLVPQDSQEGSSYHDNEKRD 255 (374)
T ss_pred HHHHHHHHHHHhc---cCCCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCcCCCCCCCcccccccccc
Confidence 2222222223221 22457999999999999888777 7 3 21 355554331 1 11121
Q ss_pred cCCh-h---hhhhcc-C----------CCCC--h---HHHHHHHHHcCCeEEEEecCCccccCchhHHHHHHHhCCCCcc
Q 042137 167 SCDI-S---VSDTLK-D----------SPLT--V---LPIIQELMRCGIRVYICSGDSDGRVPTTSKRHSINKLGALVNT 226 (253)
Q Consensus 167 ~cs~-~---v~~~~~-d----------~~~~--~---~~~l~~LL~~girVLiY~Gd~D~i~n~~g~~~wi~~l~w~~~~ 226 (253)
.-+- . ..+.|. + .+.+ . ...-..+++. ..|+|..|+..... .++++|++.+.--...
T Consensus 256 ~l~~~~~~~~~~~y~~~~~~~~~~~~~~~~n~~~n~d~~~W~~I~~~-~~vfVi~Ge~Evfr--ddI~~~~~~~~~~~~~ 332 (374)
T PF10340_consen 256 MLSYKGLSMFGDAYIGNNDPENDLNSLPFVNIEYNFDAEDWKDILKK-YSVFVIYGEDEVFR--DDILEWAKKLNDVKPN 332 (374)
T ss_pred ccchhhHHHHHHhhccccccccccccCCccCcccCCChhHHHHhccC-CcEEEEECCccccH--HHHHHHHHHHhhcCcc
Confidence 1110 0 001111 1 1111 1 2355667664 69999999998776 6788999988744333
No 17
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=86.19 E-value=2.3 Score=41.07 Aligned_cols=64 Identities=20% Similarity=0.175 Sum_probs=40.4
Q ss_pred CcCceeeec--cccccccCCccccccCChHHHHHHHHHHHHHHHHhCccccCCceEEEeeccCCCccccccc
Q 042137 78 VKYFIMCSS--WSLQQELDFPTRIHHLTMTRTAEDSYTLLVNWFERLPEYRAREFFLAGESYAGHFVPQACS 147 (253)
Q Consensus 78 ~anlLfiDq--fSy~~~~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~YvP~la~ 147 (253)
..|++-+|- ++-+ .-... . .+...+|.++.++++...+.. .+...+++|.|+|.|||-+-.++.
T Consensus 73 d~nVI~VDw~g~g~s---~y~~a-~-~~t~~vg~~la~lI~~L~~~~-gl~l~~VhLIGHSLGAhIAg~ag~ 138 (442)
T TIGR03230 73 SANVIVVDWLSRAQQ---HYPTS-A-AYTKLVGKDVAKFVNWMQEEF-NYPWDNVHLLGYSLGAHVAGIAGS 138 (442)
T ss_pred CCEEEEEECCCcCCC---CCccc-c-ccHHHHHHHHHHHHHHHHHhh-CCCCCcEEEEEECHHHHHHHHHHH
Confidence 368999997 4322 11111 1 245677788887776554433 245568999999999996554444
No 18
>PLN02442 S-formylglutathione hydrolase
Probab=85.62 E-value=2.2 Score=38.15 Aligned_cols=29 Identities=10% Similarity=0.088 Sum_probs=22.2
Q ss_pred HcCCeEEEEecCCccccCch-hHHHHHHHh
Q 042137 192 RCGIRVYICSGDSDGRVPTT-SKRHSINKL 220 (253)
Q Consensus 192 ~~girVLiY~Gd~D~i~n~~-g~~~wi~~l 220 (253)
..+.+|++.+|+.|.+|+.. .++.+.+.+
T Consensus 215 ~~~~pvli~~G~~D~~v~~~~~s~~~~~~l 244 (283)
T PLN02442 215 DVSATILIDQGEADKFLKEQLLPENFEEAC 244 (283)
T ss_pred ccCCCEEEEECCCCccccccccHHHHHHHH
Confidence 34689999999999999974 456665555
No 19
>PRK10566 esterase; Provisional
Probab=83.90 E-value=3.3 Score=35.39 Aligned_cols=32 Identities=16% Similarity=0.090 Sum_probs=27.1
Q ss_pred CCeEEEEecCCccccCchhHHHHHHHhCCCCc
Q 042137 194 GIRVYICSGDSDGRVPTTSKRHSINKLGALVN 225 (253)
Q Consensus 194 girVLiY~Gd~D~i~n~~g~~~wi~~l~w~~~ 225 (253)
..+||+.+|+.|.++|...+++..+.++=.+.
T Consensus 186 ~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~ 217 (249)
T PRK10566 186 DRPLLLWHGLADDVVPAAESLRLQQALRERGL 217 (249)
T ss_pred CCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCC
Confidence 36899999999999999999998888864443
No 20
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=83.57 E-value=1.3 Score=37.04 Aligned_cols=60 Identities=13% Similarity=0.073 Sum_probs=38.1
Q ss_pred cCcCceeeec--cccccccCCccccccCChHHHHHHHHHHHHHHHHhCccccCCceEEEeeccCCCccccccc
Q 042137 77 SVKYFIMCSS--WSLQQELDFPTRIHHLTMTRTAEDSYTLLVNWFERLPEYRAREFFLAGESYAGHFVPQACS 147 (253)
Q Consensus 77 ~~anlLfiDq--fSy~~~~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~YvP~la~ 147 (253)
+..+++.+|. +-.+ .....-. .+.++.++++.+++... ...+++++|+|+||..+..++.
T Consensus 38 ~~~~vi~~D~~G~G~S---~~~~~~~-~~~~~~~~~~~~~i~~~-------~~~~~~l~G~S~Gg~~a~~~a~ 99 (257)
T TIGR03611 38 QRFHVVTYDHRGTGRS---PGELPPG-YSIAHMADDVLQLLDAL-------NIERFHFVGHALGGLIGLQLAL 99 (257)
T ss_pred hccEEEEEcCCCCCCC---CCCCccc-CCHHHHHHHHHHHHHHh-------CCCcEEEEEechhHHHHHHHHH
Confidence 4578899998 3222 1111111 36667777777666542 3357999999999988776654
No 21
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=82.82 E-value=4.7 Score=34.59 Aligned_cols=117 Identities=16% Similarity=0.156 Sum_probs=71.6
Q ss_pred cCceeeeccccccccCCccccccCChHHHHHHHHHHHHHHHHhCccccCCceEEEeeccCCCccccccc-cCccccHHHH
Q 042137 79 KYFIMCSSWSLQQELDFPTRIHHLTMTRTAEDSYTLLVNWFERLPEYRAREFFLAGESYAGHFVPQACS-IDPSIQQDFQ 157 (253)
Q Consensus 79 anlLfiDqfSy~~~~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~YvP~la~-iN~~I~~~V~ 157 (253)
..|+-||+..|- -. ..+.+++|.|+-..++.+.++. ..+.+-|.|-|+|.--+|.+.. + -++.|
T Consensus 30 ~~VvGvdsl~Yf---w~-----~rtP~~~a~Dl~~~i~~y~~~w---~~~~vvLiGYSFGADvlP~~~nrL----p~~~r 94 (192)
T PF06057_consen 30 VPVVGVDSLRYF---WS-----ERTPEQTAADLARIIRHYRARW---GRKRVVLIGYSFGADVLPFIYNRL----PAALR 94 (192)
T ss_pred CeEEEechHHHH---hh-----hCCHHHHHHHHHHHHHHHHHHh---CCceEEEEeecCCchhHHHHHhhC----CHHHH
Confidence 467778884443 11 1488999999999998888754 4678999999999999999887 7 33444
Q ss_pred hhhC---------CCCCCcCChhhhhhcc--CCCCChHHHHHHHHHcCCeEEEEecCC--ccccCchhH
Q 042137 158 SNFH---------QFKRPSCDISVSDTLK--DSPLTVLPIIQELMRCGIRVYICSGDS--DGRVPTTSK 213 (253)
Q Consensus 158 ~aL~---------~~~w~~cs~~v~~~~~--d~~~~~~~~l~~LL~~girVLiY~Gd~--D~i~n~~g~ 213 (253)
+.+- ...|+.--.... .+. +..-++.+.+..|= ..+|+...|.. |..||.+-.
T Consensus 95 ~~v~~v~Ll~p~~~~dFeihv~~wl-g~~~~~~~~~~~pei~~l~--~~~v~CiyG~~E~d~~cp~l~~ 160 (192)
T PF06057_consen 95 ARVAQVVLLSPSTTADFEIHVSGWL-GMGGDDAAYPVIPEIAKLP--PAPVQCIYGEDEDDSLCPSLRQ 160 (192)
T ss_pred hheeEEEEeccCCcceEEEEhhhhc-CCCCCcccCCchHHHHhCC--CCeEEEEEcCCCCCCcCccccC
Confidence 4333 111221111110 011 11124556655553 46888888865 467875443
No 22
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=82.74 E-value=0.84 Score=36.97 Aligned_cols=63 Identities=19% Similarity=0.152 Sum_probs=37.3
Q ss_pred cCcCceeeeccccccccCCccccccCChHHHHHHHHHHHHHHHHhCccccCCceEEEeeccCCCccccccc
Q 042137 77 SVKYFIMCSSWSLQQELDFPTRIHHLTMTRTAEDSYTLLVNWFERLPEYRAREFFLAGESYAGHFVPQACS 147 (253)
Q Consensus 77 ~~anlLfiDqfSy~~~~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~YvP~la~ 147 (253)
+..+++.+|.-.++.. ....+....+.++.++++.++++.. . ..+++|.|+|+||..+-.++.
T Consensus 23 ~~~~v~~~d~~G~G~s-~~~~~~~~~~~~~~~~~l~~~l~~~----~---~~~~~lvG~S~Gg~~a~~~a~ 85 (228)
T PF12697_consen 23 RGYRVIAFDLPGHGRS-DPPPDYSPYSIEDYAEDLAELLDAL----G---IKKVILVGHSMGGMIALRLAA 85 (228)
T ss_dssp TTSEEEEEECTTSTTS-SSHSSGSGGSHHHHHHHHHHHHHHT----T---TSSEEEEEETHHHHHHHHHHH
T ss_pred CCCEEEEEecCCcccc-ccccccCCcchhhhhhhhhhccccc----c---ccccccccccccccccccccc
Confidence 4567888888323200 1111111135566666666665443 2 268999999999998766654
No 23
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=81.91 E-value=2.3 Score=38.91 Aligned_cols=108 Identities=15% Similarity=0.048 Sum_probs=58.7
Q ss_pred CCceEEEEEEEeCCCCCCcceecccCCeeeeCCCCccccCCCCccc-CcCceeeec--cccccccCCccccccCChHHHH
Q 042137 32 AGRALFYYFVESANSSTEPLSLAELGPYPVNTDGKCLSHSKYARNS-VKYFIMCSS--WSLQQELDFPTRIHHLTMTRTA 108 (253)
Q Consensus 32 ~~~~lFywf~es~~p~~~Plil~E~GP~~~~~~~~~l~~n~~sW~~-~anlLfiDq--fSy~~~~~~~~~~~~~~~~~~a 108 (253)
.+..+|+......+...+|+||.=+|--. ... .....---.+.+ -.+++-+|. +..+ ....++. .+-+..+
T Consensus 70 ~g~~l~~~~~~p~~~~~~~~iv~lHG~~~-~~~-~~~~~~~~~l~~~g~~v~~~D~~G~G~S---~~~~~~~-~~~~~~~ 143 (349)
T PLN02385 70 RGVEIFSKSWLPENSRPKAAVCFCHGYGD-TCT-FFFEGIARKIASSGYGVFAMDYPGFGLS---EGLHGYI-PSFDDLV 143 (349)
T ss_pred CCCEEEEEEEecCCCCCCeEEEEECCCCC-ccc-hHHHHHHHHHHhCCCEEEEecCCCCCCC---CCCCCCc-CCHHHHH
Confidence 36788887776542233466665555211 000 000000011222 368888998 4332 2122222 2666778
Q ss_pred HHHHHHHHHHHHhCccccCCceEEEeeccCCCcccccc
Q 042137 109 EDSYTLLVNWFERLPEYRAREFFLAGESYAGHFVPQAC 146 (253)
Q Consensus 109 ~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~YvP~la 146 (253)
+++.++++.. ..-+++...+++|.|+|.||..+-.++
T Consensus 144 ~dv~~~l~~l-~~~~~~~~~~~~LvGhSmGG~val~~a 180 (349)
T PLN02385 144 DDVIEHYSKI-KGNPEFRGLPSFLFGQSMGGAVALKVH 180 (349)
T ss_pred HHHHHHHHHH-HhccccCCCCEEEEEeccchHHHHHHH
Confidence 8887777654 333445566899999999997665444
No 24
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=80.39 E-value=5.1 Score=35.82 Aligned_cols=28 Identities=25% Similarity=0.237 Sum_probs=24.1
Q ss_pred CCeEEEEecCCccccCchhHHHHHHHhC
Q 042137 194 GIRVYICSGDSDGRVPTTSKRHSINKLG 221 (253)
Q Consensus 194 girVLiY~Gd~D~i~n~~g~~~wi~~l~ 221 (253)
.+++||.+|+.|.+||....+...+++.
T Consensus 248 ~~P~lii~g~~D~~~p~~~~~~~~~~~~ 275 (306)
T TIGR01249 248 NIPTYIVHGRYDLCCPLQSAWALHKAFP 275 (306)
T ss_pred CCCeEEEecCCCCCCCHHHHHHHHHhCC
Confidence 4799999999999999988877777654
No 25
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=78.87 E-value=2.3 Score=34.92 Aligned_cols=61 Identities=20% Similarity=0.258 Sum_probs=33.6
Q ss_pred CcCceeeec--cccccccCCccccccCChHHHHHHHHHHHHHHHHhCccccCCceEEEeeccCCCccccccc
Q 042137 78 VKYFIMCSS--WSLQQELDFPTRIHHLTMTRTAEDSYTLLVNWFERLPEYRAREFFLAGESYAGHFVPQACS 147 (253)
Q Consensus 78 ~anlLfiDq--fSy~~~~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~YvP~la~ 147 (253)
..+++.+|. +..+ ..+......+.++.++++ +..+.+.+ ..++++|.|+|+||..+..+|.
T Consensus 27 ~~~v~~~d~~g~G~s---~~~~~~~~~~~~~~~~~~---~~~~~~~~---~~~~~~l~G~S~Gg~ia~~~a~ 89 (251)
T TIGR03695 27 HFRCLAIDLPGHGSS---QSPDEIERYDFEEAAQDI---LATLLDQL---GIEPFFLVGYSMGGRIALYYAL 89 (251)
T ss_pred cCeEEEEcCCCCCCC---CCCCccChhhHHHHHHHH---HHHHHHHc---CCCeEEEEEeccHHHHHHHHHH
Confidence 467788887 3332 111111112444555552 22333332 3468999999999987766654
No 26
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=77.83 E-value=3.8 Score=38.99 Aligned_cols=114 Identities=11% Similarity=-0.014 Sum_probs=58.9
Q ss_pred EEEecCCCCceEEEEEEEeCCCCCCcceecccCCeeeeCCCCccccCCCCccc-CcCceeeeccccccccCCccccccCC
Q 042137 25 YVTVDAKAGRALFYYFVESANSSTEPLSLAELGPYPVNTDGKCLSHSKYARNS-VKYFIMCSSWSLQQELDFPTRIHHLT 103 (253)
Q Consensus 25 yi~v~~~~~~~lFywf~es~~p~~~Plil~E~GP~~~~~~~~~l~~n~~sW~~-~anlLfiDqfSy~~~~~~~~~~~~~~ 103 (253)
.|.+....+..|--|++........|+||.=.|.-....+. ...---...+ -.++|-+|..+++ .... .. .+
T Consensus 170 ~v~i~~~~g~~l~g~l~~P~~~~~~P~Vli~gG~~~~~~~~--~~~~~~~La~~Gy~vl~~D~pG~G---~s~~-~~-~~ 242 (414)
T PRK05077 170 ELEFPIPGGGPITGFLHLPKGDGPFPTVLVCGGLDSLQTDY--YRLFRDYLAPRGIAMLTIDMPSVG---FSSK-WK-LT 242 (414)
T ss_pred EEEEEcCCCcEEEEEEEECCCCCCccEEEEeCCcccchhhh--HHHHHHHHHhCCCEEEEECCCCCC---CCCC-CC-cc
Confidence 34443222336776666554334578888444432111110 0000001122 2678888884433 1111 11 01
Q ss_pred hHHHHHHHHHHHHHHHHhCccccCCceEEEeeccCCCccccccc
Q 042137 104 MTRTAEDSYTLLVNWFERLPEYRAREFFLAGESYAGHFVPQACS 147 (253)
Q Consensus 104 ~~~~a~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~YvP~la~ 147 (253)
.........+..++...|.....++.+.|.|+||..++.+|.
T Consensus 243 --~d~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~ 284 (414)
T PRK05077 243 --QDSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAY 284 (414)
T ss_pred --ccHHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHH
Confidence 112223345556666777777778999999999999877664
No 27
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=76.31 E-value=3.9 Score=38.79 Aligned_cols=63 Identities=14% Similarity=0.122 Sum_probs=41.0
Q ss_pred CcCceeeec--c--ccc--cccCCccccccCChHHHHHHHHHHHHHHHHhCccccCCceEEEeeccCCCcc
Q 042137 78 VKYFIMCSS--W--SLQ--QELDFPTRIHHLTMTRTAEDSYTLLVNWFERLPEYRAREFFLAGESYAGHFV 142 (253)
Q Consensus 78 ~anlLfiDq--f--Sy~--~~~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~Yv 142 (253)
.|-++++|. | |.. +.....-.+ .+.+++-.|+..|++.+-.++....+.|+.++|-||||.-.
T Consensus 59 ~a~~v~lEHRyYG~S~P~~~~s~~nL~y--Lt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~La 127 (434)
T PF05577_consen 59 GALVVALEHRYYGKSQPFGDLSTENLRY--LTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALA 127 (434)
T ss_dssp TEEEEEE--TTSTTB-TTGGGGGSTTTC---SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHH
T ss_pred CCcEEEeehhhhcCCCCccccchhhHHh--cCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHH
Confidence 367788888 3 221 000111124 48999999999999998878877777899999999999754
No 28
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=75.54 E-value=3.5 Score=35.02 Aligned_cols=75 Identities=15% Similarity=0.173 Sum_probs=46.8
Q ss_pred CCceEEEeeccCCCccccccc-c-------Cccc--cHHHHhhhC-C--CCCCc----CChhhhhhccCCCCChHHHHHH
Q 042137 127 AREFFLAGESYAGHFVPQACS-I-------DPSI--QQDFQSNFH-Q--FKRPS----CDISVSDTLKDSPLTVLPIIQE 189 (253)
Q Consensus 127 ~~~~~i~GESYaG~YvP~la~-i-------N~~I--~~~V~~aL~-~--~~w~~----cs~~v~~~~~d~~~~~~~~l~~ 189 (253)
...+.|.|-|-||.|+-.+|. . ||.+ ....++.|| . ..|.. ....+. .++ .++.
T Consensus 58 ~~~~~liGSSlGG~~A~~La~~~~~~avLiNPav~p~~~l~~~iG~~~~~~~~e~~~~~~~~~~-~l~--------~l~~ 128 (187)
T PF05728_consen 58 PENVVLIGSSLGGFYATYLAERYGLPAVLINPAVRPYELLQDYIGEQTNPYTGESYELTEEHIE-ELK--------ALEV 128 (187)
T ss_pred CCCeEEEEEChHHHHHHHHHHHhCCCEEEEcCCCCHHHHHHHhhCccccCCCCccceechHhhh-hcc--------eEec
Confidence 345999999999999999886 3 7765 345677777 1 12221 111110 111 0000
Q ss_pred -HHHcCCeEEEEecCCccccCc
Q 042137 190 -LMRCGIRVYICSGDSDGRVPT 210 (253)
Q Consensus 190 -LL~~girVLiY~Gd~D~i~n~ 210 (253)
-+++..|++|..|..|-++++
T Consensus 129 ~~~~~~~~~lvll~~~DEvLd~ 150 (187)
T PF05728_consen 129 PYPTNPERYLVLLQTGDEVLDY 150 (187)
T ss_pred cccCCCccEEEEEecCCcccCH
Confidence 034457999999999999999
No 29
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=75.01 E-value=1.8 Score=39.79 Aligned_cols=101 Identities=20% Similarity=0.324 Sum_probs=56.5
Q ss_pred HHHHhCccccCCceEEEeeccCCCccccccccCccc---------cHHHHhhhC--C--CCCCcCChhhhhhcc--CCCC
Q 042137 117 NWFERLPEYRAREFFLAGESYAGHFVPQACSIDPSI---------QQDFQSNFH--Q--FKRPSCDISVSDTLK--DSPL 181 (253)
Q Consensus 117 ~f~~~fp~~~~~~~~i~GESYaG~YvP~la~iN~~I---------~~~V~~aL~--~--~~w~~cs~~v~~~~~--d~~~ 181 (253)
.|....|+.-.+.+.++|.|-||...-.+|.++++| ..+.+..++ . ..|.+ +..-++ |...
T Consensus 164 d~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~rv~~~~~~vP~l~d~~~~~~~~~~~~~y~~----~~~~~~~~d~~~ 239 (320)
T PF05448_consen 164 DFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDPRVKAAAADVPFLCDFRRALELRADEGPYPE----IRRYFRWRDPHH 239 (320)
T ss_dssp HHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSST-SEEEEESESSSSHHHHHHHT--STTTHH----HHHHHHHHSCTH
T ss_pred HHHHhCCCcCcceEEEEeecCchHHHHHHHHhCccccEEEecCCCccchhhhhhcCCccccHHH----HHHHHhccCCCc
Confidence 466778999889999999999998654443343222 334444443 1 11211 111111 2222
Q ss_pred ChHHHHHHHHH----------cCCeEEEEecCCccccCchhHHHHHHHhC
Q 042137 182 TVLPIIQELMR----------CGIRVYICSGDSDGRVPTTSKRHSINKLG 221 (253)
Q Consensus 182 ~~~~~l~~LL~----------~girVLiY~Gd~D~i~n~~g~~~wi~~l~ 221 (253)
...+.+-+.|. -..+|++-.|=.|.+||..++-+..++|.
T Consensus 240 ~~~~~v~~~L~Y~D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~ 289 (320)
T PF05448_consen 240 EREPEVFETLSYFDAVNFARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIP 289 (320)
T ss_dssp CHHHHHHHHHHTT-HHHHGGG--SEEEEEEETT-SSS-HHHHHHHHCC--
T ss_pred ccHHHHHHHHhhhhHHHHHHHcCCCEEEEEecCCCCCCchhHHHHHhccC
Confidence 22222211111 15799999999999999999999988775
No 30
>PRK10673 acyl-CoA esterase; Provisional
Probab=74.82 E-value=3.3 Score=35.22 Aligned_cols=60 Identities=13% Similarity=0.050 Sum_probs=40.5
Q ss_pred cCcCceeeeccccccccCCccccccCChHHHHHHHHHHHHHHHHhCccccCCceEEEeeccCCCccccccc
Q 042137 77 SVKYFIMCSSWSLQQELDFPTRIHHLTMTRTAEDSYTLLVNWFERLPEYRAREFFLAGESYAGHFVPQACS 147 (253)
Q Consensus 77 ~~anlLfiDqfSy~~~~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~YvP~la~ 147 (253)
+..+++.+|.=.++.. ..... .+.++.++++.+++..+ ...++.|.|+|.||..+..+|.
T Consensus 41 ~~~~vi~~D~~G~G~s-~~~~~---~~~~~~~~d~~~~l~~l-------~~~~~~lvGhS~Gg~va~~~a~ 100 (255)
T PRK10673 41 NDHDIIQVDMRNHGLS-PRDPV---MNYPAMAQDLLDTLDAL-------QIEKATFIGHSMGGKAVMALTA 100 (255)
T ss_pred hCCeEEEECCCCCCCC-CCCCC---CCHHHHHHHHHHHHHHc-------CCCceEEEEECHHHHHHHHHHH
Confidence 4579999999222200 11222 36777888888888653 3357999999999998866654
No 31
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=74.77 E-value=9.1 Score=35.25 Aligned_cols=26 Identities=35% Similarity=0.327 Sum_probs=22.4
Q ss_pred CeEEEEecCCccccCchhHHHHHHHh
Q 042137 195 IRVYICSGDSDGRVPTTSKRHSINKL 220 (253)
Q Consensus 195 irVLiY~Gd~D~i~n~~g~~~wi~~l 220 (253)
.+|||..|+.|.++|....+...+++
T Consensus 265 ~pvlii~G~~D~~~p~~~~~~~~~~~ 290 (326)
T KOG1454|consen 265 CPVLIIWGDKDQIVPLELAEELKKKL 290 (326)
T ss_pred CceEEEEcCcCCccCHHHHHHHHhhC
Confidence 77999999999999999777766666
No 32
>PRK00870 haloalkane dehalogenase; Provisional
Probab=73.48 E-value=3.7 Score=36.47 Aligned_cols=114 Identities=18% Similarity=0.140 Sum_probs=60.2
Q ss_pred cccccCCCCCCCCCcceEEeEEEecCCCC--ceEEEEEEEeCCCCCCcceecccCCeeeeCCCCccccCCCCcc------
Q 042137 5 KLKGFYLGQPNGGEIDQHSGYVTVDAKAG--RALFYYFVESANSSTEPLSLAELGPYPVNTDGKCLSHSKYARN------ 76 (253)
Q Consensus 5 ~~v~~lPg~~~~~~~~~ysGyi~v~~~~~--~~lFywf~es~~p~~~Plil~E~GP~~~~~~~~~l~~n~~sW~------ 76 (253)
..+.+||.++. .=.|+.++...+ ..++|.-. .++. .|.||.=+|=. .+...|.
T Consensus 9 ~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~y~~~--G~~~-~~~lvliHG~~----------~~~~~w~~~~~~L 69 (302)
T PRK00870 9 SRFENLPDYPF------APHYVDVDDGDGGPLRMHYVDE--GPAD-GPPVLLLHGEP----------SWSYLYRKMIPIL 69 (302)
T ss_pred ccccCCcCCCC------CceeEeecCCCCceEEEEEEec--CCCC-CCEEEEECCCC----------CchhhHHHHHHHH
Confidence 35667777654 334788875323 35666532 2443 34444444510 0111222
Q ss_pred --cCcCceeeec--cccccccCCccccccCChHHHHHHHHHHHHHHHHhCccccCCceEEEeeccCCCccccccc
Q 042137 77 --SVKYFIMCSS--WSLQQELDFPTRIHHLTMTRTAEDSYTLLVNWFERLPEYRAREFFLAGESYAGHFVPQACS 147 (253)
Q Consensus 77 --~~anlLfiDq--fSy~~~~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~YvP~la~ 147 (253)
+..+++.+|. |-.+ .........+.++.++++.++|+. +...++.|.|+|+||..+-.+|.
T Consensus 70 ~~~gy~vi~~Dl~G~G~S---~~~~~~~~~~~~~~a~~l~~~l~~-------l~~~~v~lvGhS~Gg~ia~~~a~ 134 (302)
T PRK00870 70 AAAGHRVIAPDLIGFGRS---DKPTRREDYTYARHVEWMRSWFEQ-------LDLTDVTLVCQDWGGLIGLRLAA 134 (302)
T ss_pred HhCCCEEEEECCCCCCCC---CCCCCcccCCHHHHHHHHHHHHHH-------cCCCCEEEEEEChHHHHHHHHHH
Confidence 2368899998 4333 211110012556666666665543 23458999999999987655543
No 33
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=72.75 E-value=5.1 Score=32.97 Aligned_cols=30 Identities=20% Similarity=0.337 Sum_probs=25.3
Q ss_pred cCCeEEEEecCCccccCchhHHHHHHHhCC
Q 042137 193 CGIRVYICSGDSDGRVPTTSKRHSINKLGA 222 (253)
Q Consensus 193 ~girVLiY~Gd~D~i~n~~g~~~wi~~l~w 222 (253)
-..+|++.+|+.|.++|....+.+.+.+..
T Consensus 192 ~~~Pvlii~g~~D~~~~~~~~~~~~~~~~~ 221 (251)
T TIGR02427 192 IAVPTLCIAGDQDGSTPPELVREIADLVPG 221 (251)
T ss_pred cCCCeEEEEeccCCcCChHHHHHHHHhCCC
Confidence 468999999999999999888877776653
No 34
>PRK03204 haloalkane dehalogenase; Provisional
Probab=72.54 E-value=7.7 Score=34.39 Aligned_cols=54 Identities=9% Similarity=0.162 Sum_probs=32.9
Q ss_pred cCcCceeeec--cccccccCCccccccCChHHHHHHHHHHHHHHHHhCccccCCceEEEeeccCCCc
Q 042137 77 SVKYFIMCSS--WSLQQELDFPTRIHHLTMTRTAEDSYTLLVNWFERLPEYRAREFFLAGESYAGHF 141 (253)
Q Consensus 77 ~~anlLfiDq--fSy~~~~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~Y 141 (253)
+..+++.+|. +..+ ..+.+.. .+.+..++++.++++.+ ...+++|+|+|+||.-
T Consensus 59 ~~~~vi~~D~~G~G~S---~~~~~~~-~~~~~~~~~~~~~~~~~-------~~~~~~lvG~S~Gg~v 114 (286)
T PRK03204 59 DRFRCVAPDYLGFGLS---ERPSGFG-YQIDEHARVIGEFVDHL-------GLDRYLSMGQDWGGPI 114 (286)
T ss_pred CCcEEEEECCCCCCCC---CCCCccc-cCHHHHHHHHHHHHHHh-------CCCCEEEEEECccHHH
Confidence 3478999999 5443 2222222 24555566665555432 3357999999999964
No 35
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=72.07 E-value=6.5 Score=35.98 Aligned_cols=42 Identities=21% Similarity=0.436 Sum_probs=32.9
Q ss_pred CChHHHHHHHHHHHHHHHHhCccccCCceEEEeeccCCCccccccc
Q 042137 102 LTMTRTAEDSYTLLVNWFERLPEYRAREFFLAGESYAGHFVPQACS 147 (253)
Q Consensus 102 ~~~~~~a~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~YvP~la~ 147 (253)
.+.+..++|+...++.+|..-|. ++.|.|+|.||.-+.+.|.
T Consensus 124 lS~eT~~KD~~~~i~~~fge~~~----~iilVGHSmGGaIav~~a~ 165 (343)
T KOG2564|consen 124 LSLETMSKDFGAVIKELFGELPP----QIILVGHSMGGAIAVHTAA 165 (343)
T ss_pred cCHHHHHHHHHHHHHHHhccCCC----ceEEEeccccchhhhhhhh
Confidence 37788899999999999843331 6999999999987755444
No 36
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=70.38 E-value=6.4 Score=36.85 Aligned_cols=104 Identities=19% Similarity=0.375 Sum_probs=60.9
Q ss_pred ceEEeEEEecCCCCceEEEEEEEeCCCCCCccee-----cccCCeeeeCCCCccccCCCCcccCcCceeeec--cccccc
Q 042137 20 DQHSGYVTVDAKAGRALFYYFVESANSSTEPLSL-----AELGPYPVNTDGKCLSHSKYARNSVKYFIMCSS--WSLQQE 92 (253)
Q Consensus 20 ~~ysGyi~v~~~~~~~lFywf~es~~p~~~Plil-----~E~GP~~~~~~~~~l~~n~~sW~~~anlLfiDq--fSy~~~ 92 (253)
+--+=|+.+.. +...+..-+..+.....|+|+ ...|=|..|-++ |.. .-||-.||. |-.+
T Consensus 64 ~~~~~~v~i~~--~~~iw~~~~~~~~~~~~plVliHGyGAg~g~f~~Nf~~--La~-------~~~vyaiDllG~G~S-- 130 (365)
T KOG4409|consen 64 PYSKKYVRIPN--GIEIWTITVSNESANKTPLVLIHGYGAGLGLFFRNFDD--LAK-------IRNVYAIDLLGFGRS-- 130 (365)
T ss_pred CcceeeeecCC--CceeEEEeecccccCCCcEEEEeccchhHHHHHHhhhh--hhh-------cCceEEecccCCCCC--
Confidence 33344666652 233332223223445678887 555555555543 322 558888999 4443
Q ss_pred cCCccccccCChHHHHHHHHHHHHHHHHhCccccCCceEEEeeccCCCcc
Q 042137 93 LDFPTRIHHLTMTRTAEDSYTLLVNWFERLPEYRAREFFLAGESYAGHFV 142 (253)
Q Consensus 93 ~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~Yv 142 (253)
+.+ .+. .+.+.+...+.+-+.+|.++.. -.+..|.|+|+||--.
T Consensus 131 -SRP-~F~-~d~~~~e~~fvesiE~WR~~~~---L~KmilvGHSfGGYLa 174 (365)
T KOG4409|consen 131 -SRP-KFS-IDPTTAEKEFVESIEQWRKKMG---LEKMILVGHSFGGYLA 174 (365)
T ss_pred -CCC-CCC-CCcccchHHHHHHHHHHHHHcC---CcceeEeeccchHHHH
Confidence 222 233 2444445578888888887654 3389999999999543
No 37
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=70.20 E-value=5.3 Score=34.12 Aligned_cols=61 Identities=15% Similarity=-0.021 Sum_probs=36.8
Q ss_pred CcCceeeeccccccccCCccccccCChHHHHHHHHHHHHHHHHhCccccCCceEEEeeccCCCccccccc
Q 042137 78 VKYFIMCSSWSLQQELDFPTRIHHLTMTRTAEDSYTLLVNWFERLPEYRAREFFLAGESYAGHFVPQACS 147 (253)
Q Consensus 78 ~anlLfiDqfSy~~~~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~YvP~la~ 147 (253)
..+++.+|.-.++.. ..+.... .+.+..++++.++++.+ ...+++|.|+|+||..+..+|.
T Consensus 54 ~~~vi~~D~~G~G~S-~~~~~~~-~~~~~~~~~l~~~i~~~-------~~~~~~lvG~S~Gg~~a~~~a~ 114 (278)
T TIGR03056 54 SFRVVAPDLPGHGFT-RAPFRFR-FTLPSMAEDLSALCAAE-------GLSPDGVIGHSAGAAIALRLAL 114 (278)
T ss_pred CcEEEeecCCCCCCC-CCccccC-CCHHHHHHHHHHHHHHc-------CCCCceEEEECccHHHHHHHHH
Confidence 368999998222200 1111111 36677777777766532 2357899999999986655443
No 38
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=68.48 E-value=3.7 Score=32.87 Aligned_cols=39 Identities=21% Similarity=0.255 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHHHhCccccCCceEEEeeccCCCccccccc
Q 042137 106 RTAEDSYTLLVNWFERLPEYRAREFFLAGESYAGHFVPQACS 147 (253)
Q Consensus 106 ~~a~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~YvP~la~ 147 (253)
.+++.+...+++...++|. .+++|+|+|.||.-+-.++.
T Consensus 9 ~~~~~i~~~~~~~~~~~p~---~~i~v~GHSlGg~lA~l~a~ 47 (153)
T cd00741 9 SLANLVLPLLKSALAQYPD---YKIHVTGHSLGGALAGLAGL 47 (153)
T ss_pred HHHHHHHHHHHHHHHHCCC---CeEEEEEcCHHHHHHHHHHH
Confidence 3445555555555555664 49999999999997776665
No 39
>PRK11071 esterase YqiA; Provisional
Probab=67.80 E-value=6.1 Score=33.18 Aligned_cols=99 Identities=11% Similarity=0.098 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHhCccccCCceEEEeeccCCCccccccc-c-------Ccccc--HHHHhhhC-CCCCCcCChhhhhhccC
Q 042137 110 DSYTLLVNWFERLPEYRAREFFLAGESYAGHFVPQACS-I-------DPSIQ--QDFQSNFH-QFKRPSCDISVSDTLKD 178 (253)
Q Consensus 110 ~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~YvP~la~-i-------N~~I~--~~V~~aL~-~~~w~~cs~~v~~~~~d 178 (253)
+..+++.++.+.. ..++++|.|.|.||.++-.+|. . ||.+. ...+..++ .... .+.. .+
T Consensus 46 ~~~~~l~~l~~~~---~~~~~~lvG~S~Gg~~a~~~a~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~-~~~~----~~-- 115 (190)
T PRK11071 46 DAAELLESLVLEH---GGDPLGLVGSSLGGYYATWLSQCFMLPAVVVNPAVRPFELLTDYLGENENP-YTGQ----QY-- 115 (190)
T ss_pred HHHHHHHHHHHHc---CCCCeEEEEECHHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHhcCCcccc-cCCC----cE--
Confidence 3444555555543 3458999999999998877765 3 43333 22233333 1110 0000 00
Q ss_pred CCCChHHHHHHH-------HHcCCeEEEEecCCccccCchhHHHHHHHh
Q 042137 179 SPLTVLPIIQEL-------MRCGIRVYICSGDSDGRVPTTSKRHSINKL 220 (253)
Q Consensus 179 ~~~~~~~~l~~L-------L~~girVLiY~Gd~D~i~n~~g~~~wi~~l 220 (253)
.-....++.+ ++...+|+|..|..|-++|+....+..++.
T Consensus 116 --~~~~~~~~d~~~~~~~~i~~~~~v~iihg~~De~V~~~~a~~~~~~~ 162 (190)
T PRK11071 116 --VLESRHIYDLKVMQIDPLESPDLIWLLQQTGDEVLDYRQAVAYYAAC 162 (190)
T ss_pred --EEcHHHHHHHHhcCCccCCChhhEEEEEeCCCCcCCHHHHHHHHHhc
Confidence 0001122221 223467899999999999999998887743
No 40
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=66.45 E-value=25 Score=33.54 Aligned_cols=112 Identities=15% Similarity=0.056 Sum_probs=67.9
Q ss_pred hHHHHHHHHHHHHHHHHhCccccC-CceEEEeeccCCC-------ccccccc-c--Cc-cccHHHHhhhC----------
Q 042137 104 MTRTAEDSYTLLVNWFERLPEYRA-REFFLAGESYAGH-------FVPQACS-I--DP-SIQQDFQSNFH---------- 161 (253)
Q Consensus 104 ~~~~a~~~~~fL~~f~~~fp~~~~-~~~~i~GESYaG~-------YvP~la~-i--N~-~I~~~V~~aL~---------- 161 (253)
--..|.|...+|..-..+||.... .|..+.|.||||- .+|-+.. | |. ..+|..|=.+|
T Consensus 159 GIMqAiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~p~l~~I~Gre~~~~~y~~ 238 (403)
T PF11144_consen 159 GIMQAIDIINALLDLKKIFPKNGGGLPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYALPPLRYIFGREIDFMKYIC 238 (403)
T ss_pred HHHHHHHHHHHHHHHHHhhhcccCCCcEEEEecCcHHHHHHHHHhhCccceeEEEecCccccchhheeeeeecCcccccc
Confidence 346788999999999899999985 7999999999873 2344444 2 41 12333332233
Q ss_pred ----------------CCCCCcCChhhhhhccCCCCChHHHHHHHHH-----------cCCeEEEEecCCccccCchhHH
Q 042137 162 ----------------QFKRPSCDISVSDTLKDSPLTVLPIIQELMR-----------CGIRVYICSGDSDGRVPTTSKR 214 (253)
Q Consensus 162 ----------------~~~w~~cs~~v~~~~~d~~~~~~~~l~~LL~-----------~girVLiY~Gd~D~i~n~~g~~ 214 (253)
...|+.-.... ....+.-..++.+|+ .....+.|++..|..+|..--+
T Consensus 239 ~~~~~~~~~~~i~~~~Kt~Wt~n~~S~-----~~Fs~~~~~IR~iLn~~HL~iqs~~n~~~~yvsYHs~~D~~~p~~~K~ 313 (403)
T PF11144_consen 239 SGEFFNFKNIRIYCFDKTFWTRNKNSP-----YYFSKARYIIRSILNPDHLKIQSNYNKKIIYVSYHSIKDDLAPAEDKE 313 (403)
T ss_pred cccccccCCEEEEEEeccccccCCCCc-----cccChHHHHHHHhcChHHHHHHHhcccceEEEEEeccCCCCCCHHHHH
Confidence 12233211000 011122234444432 2478899999999999998888
Q ss_pred HHHHHh
Q 042137 215 HSINKL 220 (253)
Q Consensus 215 ~wi~~l 220 (253)
...+.|
T Consensus 314 ~l~~~l 319 (403)
T PF11144_consen 314 ELYEIL 319 (403)
T ss_pred HHHHHH
Confidence 776554
No 41
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=63.85 E-value=12 Score=35.27 Aligned_cols=100 Identities=17% Similarity=0.032 Sum_probs=55.3
Q ss_pred CceEEEEEEEeCCCCCCcceecccCCeeeeCCCCccccCCCCcc-cCcCceeeec--cccccccCCccccccCChHHHHH
Q 042137 33 GRALFYYFVESANSSTEPLSLAELGPYPVNTDGKCLSHSKYARN-SVKYFIMCSS--WSLQQELDFPTRIHHLTMTRTAE 109 (253)
Q Consensus 33 ~~~lFywf~es~~p~~~Plil~E~GP~~~~~~~~~l~~n~~sW~-~~anlLfiDq--fSy~~~~~~~~~~~~~~~~~~a~ 109 (253)
+..+|++.+.......+|+||.=+|=.. +......--..+. +-.+++.+|. +..+ .....+. .+.+..++
T Consensus 120 ~~~l~~~~~~p~~~~~~~~Vl~lHG~~~---~~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S---~~~~~~~-~~~~~~~~ 192 (395)
T PLN02652 120 RNALFCRSWAPAAGEMRGILIIIHGLNE---HSGRYLHFAKQLTSCGFGVYAMDWIGHGGS---DGLHGYV-PSLDYVVE 192 (395)
T ss_pred CCEEEEEEecCCCCCCceEEEEECCchH---HHHHHHHHHHHHHHCCCEEEEeCCCCCCCC---CCCCCCC-cCHHHHHH
Confidence 5688888887753233455553333100 0000000000011 2347788888 4332 2122232 36667778
Q ss_pred HHHHHHHHHHHhCccccCCceEEEeeccCCCcc
Q 042137 110 DSYTLLVNWFERLPEYRAREFFLAGESYAGHFV 142 (253)
Q Consensus 110 ~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~Yv 142 (253)
|+..+++..-..+|. .+++|+|+|.||.-+
T Consensus 193 Dl~~~l~~l~~~~~~---~~i~lvGhSmGG~ia 222 (395)
T PLN02652 193 DTEAFLEKIRSENPG---VPCFLFGHSTGGAVV 222 (395)
T ss_pred HHHHHHHHHHHhCCC---CCEEEEEECHHHHHH
Confidence 888888877666653 489999999999855
No 42
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=63.81 E-value=8.3 Score=33.61 Aligned_cols=28 Identities=18% Similarity=0.239 Sum_probs=23.5
Q ss_pred CCeEEEEecCCccccCchhHHHHHHHhC
Q 042137 194 GIRVYICSGDSDGRVPTTSKRHSINKLG 221 (253)
Q Consensus 194 girVLiY~Gd~D~i~n~~g~~~wi~~l~ 221 (253)
.++|||..|+.|.++|....++..+.+.
T Consensus 207 ~~P~lii~G~~D~~v~~~~~~~l~~~~~ 234 (276)
T TIGR02240 207 QQPTLVLAGDDDPIIPLINMRLLAWRIP 234 (276)
T ss_pred CCCEEEEEeCCCCcCCHHHHHHHHHhCC
Confidence 5899999999999999888777666554
No 43
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=63.04 E-value=11 Score=30.84 Aligned_cols=28 Identities=21% Similarity=0.285 Sum_probs=23.4
Q ss_pred cCCeEEEEecCCccccCchhHHHHHHHh
Q 042137 193 CGIRVYICSGDSDGRVPTTSKRHSINKL 220 (253)
Q Consensus 193 ~girVLiY~Gd~D~i~n~~g~~~wi~~l 220 (253)
-.+++|+.+|..|.++|....+...+.+
T Consensus 174 i~~p~l~i~~~~D~~~p~~~~~~~~~~~ 201 (230)
T PF00561_consen 174 IKVPTLIIWGEDDPLVPPESSEQLAKLI 201 (230)
T ss_dssp TTSEEEEEEETTCSSSHHHHHHHHHHHS
T ss_pred cCCCeEEEEeCCCCCCCHHHHHHHHHhc
Confidence 4699999999999999998888844443
No 44
>PLN02965 Probable pheophorbidase
Probab=62.92 E-value=11 Score=32.47 Aligned_cols=28 Identities=4% Similarity=-0.044 Sum_probs=22.8
Q ss_pred cCCeEEEEecCCccccCchhHHHHHHHh
Q 042137 193 CGIRVYICSGDSDGRVPTTSKRHSINKL 220 (253)
Q Consensus 193 ~girVLiY~Gd~D~i~n~~g~~~wi~~l 220 (253)
-.+++|+..|..|.++|....+...+.+
T Consensus 192 i~vP~lvi~g~~D~~~~~~~~~~~~~~~ 219 (255)
T PLN02965 192 EKVPRVYIKTAKDNLFDPVRQDVMVENW 219 (255)
T ss_pred CCCCEEEEEcCCCCCCCHHHHHHHHHhC
Confidence 4689999999999999987776666554
No 45
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=61.90 E-value=5.2 Score=35.77 Aligned_cols=64 Identities=11% Similarity=-0.003 Sum_probs=39.6
Q ss_pred CcCceeeeccccccccCCccccc--cCChHHHHHHHHHHHHHHHHhCccccCCceEEEeeccCCCccccccc
Q 042137 78 VKYFIMCSSWSLQQELDFPTRIH--HLTMTRTAEDSYTLLVNWFERLPEYRAREFFLAGESYAGHFVPQACS 147 (253)
Q Consensus 78 ~anlLfiDqfSy~~~~~~~~~~~--~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~YvP~la~ 147 (253)
..|++.+|- +.. . ...+. ..+...+++++..+|+...+.. .....+++|.|+|.||+-+-.++.
T Consensus 66 ~~nVi~vD~-~~~---~-~~~y~~a~~~~~~v~~~la~~l~~L~~~~-g~~~~~i~lIGhSlGa~vAg~~a~ 131 (275)
T cd00707 66 DYNVIVVDW-GRG---A-NPNYPQAVNNTRVVGAELAKFLDFLVDNT-GLSLENVHLIGHSLGAHVAGFAGK 131 (275)
T ss_pred CCEEEEEEC-ccc---c-ccChHHHHHhHHHHHHHHHHHHHHHHHhc-CCChHHEEEEEecHHHHHHHHHHH
Confidence 478888885 211 0 01111 0245556677777777665542 233458999999999998766665
No 46
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=61.79 E-value=7.9 Score=34.02 Aligned_cols=58 Identities=10% Similarity=0.040 Sum_probs=37.5
Q ss_pred cCcCceeeec--cccccccCCcc----ccccCChHHHHHHHHHHHHHHHHhCccccCCceEEEeeccCCCccc
Q 042137 77 SVKYFIMCSS--WSLQQELDFPT----RIHHLTMTRTAEDSYTLLVNWFERLPEYRAREFFLAGESYAGHFVP 143 (253)
Q Consensus 77 ~~anlLfiDq--fSy~~~~~~~~----~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~YvP 143 (253)
+.++++.+|. +-.+.. .+.. ... .+.++.|+++.++|... ...+++|.|+|.||..+-
T Consensus 54 ~~~~vi~~DlpG~G~S~~-~~~~~~~~~~~-~~~~~~a~~l~~~l~~l-------~~~~~~lvGhS~Gg~va~ 117 (294)
T PLN02824 54 KSHRVYAIDLLGYGYSDK-PNPRSAPPNSF-YTFETWGEQLNDFCSDV-------VGDPAFVICNSVGGVVGL 117 (294)
T ss_pred hCCeEEEEcCCCCCCCCC-Ccccccccccc-CCHHHHHHHHHHHHHHh-------cCCCeEEEEeCHHHHHHH
Confidence 4568999999 433310 1110 111 36777788887777655 236899999999998763
No 47
>PLN02454 triacylglycerol lipase
Probab=60.79 E-value=10 Score=36.33 Aligned_cols=44 Identities=16% Similarity=0.200 Sum_probs=35.5
Q ss_pred ChHHHHHHHHHHHHHHHHhCccccCCceEEEeeccCCCccccccc
Q 042137 103 TMTRTAEDSYTLLVNWFERLPEYRAREFFLAGESYAGHFVPQACS 147 (253)
Q Consensus 103 ~~~~~a~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~YvP~la~ 147 (253)
+...+.+++...+++..+++|..+. .++++|+|.||--+-..|.
T Consensus 204 ~~~S~r~qvl~~V~~l~~~Yp~~~~-sI~vTGHSLGGALAtLaA~ 247 (414)
T PLN02454 204 TKLSARSQLLAKIKELLERYKDEKL-SIVLTGHSLGASLATLAAF 247 (414)
T ss_pred hhHHHHHHHHHHHHHHHHhCCCCCc-eEEEEecCHHHHHHHHHHH
Confidence 5567888999999999999997643 6999999999986655554
No 48
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=60.76 E-value=41 Score=32.39 Aligned_cols=62 Identities=15% Similarity=0.144 Sum_probs=44.6
Q ss_pred CcccCcCceeeec--cccccccCCccccccCChHHHHHHHHHHHHHHHHhCccccCCceEEEeeccCCCc
Q 042137 74 ARNSVKYFIMCSS--WSLQQELDFPTRIHHLTMTRTAEDSYTLLVNWFERLPEYRAREFFLAGESYAGHF 141 (253)
Q Consensus 74 sW~~~anlLfiDq--fSy~~~~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~Y 141 (253)
|=-=.+|.|+||. |--+- ..+.++...+-.++|.|.....+.|=..+|. ++.=+|-|=||+-
T Consensus 84 t~Lld~NQl~vEhRfF~~Sr--P~p~DW~~Lti~QAA~D~Hri~~A~K~iY~~----kWISTG~SKGGmT 147 (448)
T PF05576_consen 84 TQLLDGNQLSVEHRFFGPSR--PEPADWSYLTIWQAASDQHRIVQAFKPIYPG----KWISTGGSKGGMT 147 (448)
T ss_pred hHhhccceEEEEEeeccCCC--CCCCCcccccHhHhhHHHHHHHHHHHhhccC----CceecCcCCCcee
Confidence 3334589999999 54331 2344565568999999999888877544553 6888999999985
No 49
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=60.59 E-value=10 Score=31.81 Aligned_cols=116 Identities=16% Similarity=0.149 Sum_probs=64.1
Q ss_pred HHHHHHHHHHHHHHHHhCccccCCceEEEeeccCCCccccccc-cCccccHHHHhhhC------CCCCCcCChhhhh---
Q 042137 105 TRTAEDSYTLLVNWFERLPEYRAREFFLAGESYAGHFVPQACS-IDPSIQQDFQSNFH------QFKRPSCDISVSD--- 174 (253)
Q Consensus 105 ~~~a~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~YvP~la~-iN~~I~~~V~~aL~------~~~w~~cs~~v~~--- 174 (253)
....+|+.++++..-++. ......+.|.|.|+||+-+-.++. - +. -++.++- ...+.........
T Consensus 42 ~~~~~D~~~~i~~l~~~~-~iD~~ri~i~G~S~GG~~a~~~~~~~-~~---~f~a~v~~~g~~d~~~~~~~~~~~~~~~~ 116 (213)
T PF00326_consen 42 QADVDDVVAAIEYLIKQY-YIDPDRIGIMGHSYGGYLALLAATQH-PD---RFKAAVAGAGVSDLFSYYGTTDIYTKAEY 116 (213)
T ss_dssp HHHHHHHHHHHHHHHHTT-SEEEEEEEEEEETHHHHHHHHHHHHT-CC---GSSEEEEESE-SSTTCSBHHTCCHHHGHH
T ss_pred ccchhhHHHHHHHHhccc-cccceeEEEEcccccccccchhhccc-ce---eeeeeeccceecchhcccccccccccccc
Confidence 455677777776665544 556778999999999997655543 2 00 0000000 0000000000000
Q ss_pred -hccCCCCChHHHH------HHHHH--cCCeEEEEecCCccccCchhHHHHHHHhCCCCcc
Q 042137 175 -TLKDSPLTVLPII------QELMR--CGIRVYICSGDSDGRVPTTSKRHSINKLGALVNT 226 (253)
Q Consensus 175 -~~~d~~~~~~~~l------~~LL~--~girVLiY~Gd~D~i~n~~g~~~wi~~l~w~~~~ 226 (253)
.+.+... ....+ ..+-+ ...+|||.+|+.|.+||...+.++.++|.-.+..
T Consensus 117 ~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~ 176 (213)
T PF00326_consen 117 LEYGDPWD-NPEFYRELSPISPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKP 176 (213)
T ss_dssp HHHSSTTT-SHHHHHHHHHGGGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSS
T ss_pred cccCccch-hhhhhhhhccccccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCC
Confidence 0001100 11111 11222 4589999999999999999999999998754443
No 50
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=59.82 E-value=9.8 Score=28.79 Aligned_cols=29 Identities=17% Similarity=0.257 Sum_probs=26.9
Q ss_pred CCeEEEEecCCccccCchhHHHHHHHhCC
Q 042137 194 GIRVYICSGDSDGRVPTTSKRHSINKLGA 222 (253)
Q Consensus 194 girVLiY~Gd~D~i~n~~g~~~wi~~l~w 222 (253)
-.+||+.+|..|.+.|+.+.++..++|.-
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~~ 62 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLPG 62 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCCC
Confidence 38999999999999999999999998874
No 51
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=59.57 E-value=11 Score=29.24 Aligned_cols=39 Identities=18% Similarity=0.313 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHHHhCccccCCceEEEeeccCCCccccccc
Q 042137 106 RTAEDSYTLLVNWFERLPEYRAREFFLAGESYAGHFVPQACS 147 (253)
Q Consensus 106 ~~a~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~YvP~la~ 147 (253)
.....+.+.|++..+++| ...+.|+|+|-||-.+-.++.
T Consensus 45 ~~~~~~~~~l~~~~~~~~---~~~i~itGHSLGGalA~l~a~ 83 (140)
T PF01764_consen 45 SLYDQILDALKELVEKYP---DYSIVITGHSLGGALASLAAA 83 (140)
T ss_dssp HHHHHHHHHHHHHHHHST---TSEEEEEEETHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccc---CccchhhccchHHHHHHHHHH
Confidence 344566777777777777 458999999999987766664
No 52
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=58.96 E-value=7.9 Score=33.58 Aligned_cols=40 Identities=18% Similarity=0.216 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHHHhCccccCCceEEEeeccCCCccccccc
Q 042137 106 RTAEDSYTLLVNWFERLPEYRAREFFLAGESYAGHFVPQACS 147 (253)
Q Consensus 106 ~~a~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~YvP~la~ 147 (253)
-+-.|+.++...|++.++ .+|||.|+|+|-|+..+-.|-+
T Consensus 75 ~ay~DV~~AF~~yL~~~n--~GRPfILaGHSQGs~~l~~LL~ 114 (207)
T PF11288_consen 75 LAYSDVRAAFDYYLANYN--NGRPFILAGHSQGSMHLLRLLK 114 (207)
T ss_pred hhHHHHHHHHHHHHHhcC--CCCCEEEEEeChHHHHHHHHHH
Confidence 344788889999998887 4899999999999987765554
No 53
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=57.91 E-value=12 Score=31.41 Aligned_cols=57 Identities=11% Similarity=-0.013 Sum_probs=34.9
Q ss_pred CcCceeeec--cccccccCCccccccCChHHHHHHHHHHHHHHHHhCccccCCceEEEeeccCCCccccccc
Q 042137 78 VKYFIMCSS--WSLQQELDFPTRIHHLTMTRTAEDSYTLLVNWFERLPEYRAREFFLAGESYAGHFVPQACS 147 (253)
Q Consensus 78 ~anlLfiDq--fSy~~~~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~YvP~la~ 147 (253)
..+++.+|. +..+ ..+. . .+.+..++++.+++.. +...++.+.|+|+||.-+-.+|.
T Consensus 27 ~~~vi~~D~~G~G~S---~~~~--~-~~~~~~~~~l~~~l~~-------~~~~~~~lvG~S~Gg~va~~~a~ 85 (242)
T PRK11126 27 DYPRLYIDLPGHGGS---AAIS--V-DGFADVSRLLSQTLQS-------YNILPYWLVGYSLGGRIAMYYAC 85 (242)
T ss_pred CCCEEEecCCCCCCC---CCcc--c-cCHHHHHHHHHHHHHH-------cCCCCeEEEEECHHHHHHHHHHH
Confidence 368888888 4333 2111 1 2555666666666543 23468999999999865544443
No 54
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=57.57 E-value=15 Score=33.85 Aligned_cols=53 Identities=19% Similarity=0.088 Sum_probs=35.0
Q ss_pred CcCceeeec--cccccccCCccccccCChHHHHHHHHHHHHHHHHhCccccCCceEEEeeccCCCc
Q 042137 78 VKYFIMCSS--WSLQQELDFPTRIHHLTMTRTAEDSYTLLVNWFERLPEYRAREFFLAGESYAGHF 141 (253)
Q Consensus 78 ~anlLfiDq--fSy~~~~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~Y 141 (253)
...++.+|. |..+ ..+.+.. .+.+..++++.++|... ...+++|.|+|.||..
T Consensus 114 ~~~via~Dl~G~G~S---~~~~~~~-~~~~~~a~~l~~~l~~l-------~~~~~~lvGhS~Gg~i 168 (360)
T PLN02679 114 NYTVYAIDLLGFGAS---DKPPGFS-YTMETWAELILDFLEEV-------VQKPTVLIGNSVGSLA 168 (360)
T ss_pred CCEEEEECCCCCCCC---CCCCCcc-ccHHHHHHHHHHHHHHh-------cCCCeEEEEECHHHHH
Confidence 458889998 5444 2222222 36677777777777643 2358999999999953
No 55
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=57.49 E-value=12 Score=31.61 Aligned_cols=61 Identities=13% Similarity=0.166 Sum_probs=36.4
Q ss_pred CcCceeeec--cccccccCCccccccCChHHHHHHHHHHHHHHHHhCccccCCceEEEeeccCCCccccccc
Q 042137 78 VKYFIMCSS--WSLQQELDFPTRIHHLTMTRTAEDSYTLLVNWFERLPEYRAREFFLAGESYAGHFVPQACS 147 (253)
Q Consensus 78 ~anlLfiDq--fSy~~~~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~YvP~la~ 147 (253)
..+++.+|. +-.+.. .....-. .+.+..++++..++.. +..+++++.|+|+||..+..+|.
T Consensus 53 g~~vi~~d~~G~G~s~~-~~~~~~~-~~~~~~~~~~~~~~~~-------~~~~~~~liG~S~Gg~ia~~~a~ 115 (288)
T TIGR01250 53 GREVIMYDQLGCGYSDQ-PDDSDEL-WTIDYFVDELEEVREK-------LGLDKFYLLGHSWGGMLAQEYAL 115 (288)
T ss_pred CCEEEEEcCCCCCCCCC-CCccccc-ccHHHHHHHHHHHHHH-------cCCCcEEEEEeehHHHHHHHHHH
Confidence 368899998 322200 1111101 2566666666555443 23456999999999998877664
No 56
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=57.09 E-value=5.4 Score=33.48 Aligned_cols=25 Identities=24% Similarity=0.429 Sum_probs=14.3
Q ss_pred CCCCC---hHHHHHHHHHcCCe--EEEEec
Q 042137 178 DSPLT---VLPIIQELMRCGIR--VYICSG 202 (253)
Q Consensus 178 d~~~~---~~~~l~~LL~~gir--VLiY~G 202 (253)
|...+ +......|.+.|++ .++|-|
T Consensus 155 D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~ 184 (213)
T PF00326_consen 155 DPRVPPSQSLRLYNALRKAGKPVELLIFPG 184 (213)
T ss_dssp BSSSTTHHHHHHHHHHHHTTSSEEEEEETT
T ss_pred CCccCHHHHHHHHHHHHhcCCCEEEEEcCc
Confidence 55444 44567777777754 445533
No 57
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=56.99 E-value=35 Score=30.52 Aligned_cols=108 Identities=9% Similarity=-0.019 Sum_probs=53.8
Q ss_pred CceEEEEEEEeCCCCCCcceecccCCee-eeCCCCccccCCCCcc-cCcCceeeeccccccccCCccccccCChHHHHHH
Q 042137 33 GRALFYYFVESANSSTEPLSLAELGPYP-VNTDGKCLSHSKYARN-SVKYFIMCSSWSLQQELDFPTRIHHLTMTRTAED 110 (253)
Q Consensus 33 ~~~lFywf~es~~p~~~Plil~E~GP~~-~~~~~~~l~~n~~sW~-~~anlLfiDqfSy~~~~~~~~~~~~~~~~~~a~~ 110 (253)
...+|.|+++...+...|+||.=+|=.. .+........---.+. .-.+++-+|...++ .+.......+.....+|
T Consensus 9 ~g~~~~~~~~p~~~~~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G---~S~g~~~~~~~~~~~~D 85 (266)
T TIGR03101 9 HGFRFCLYHPPVAVGPRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCG---DSAGDFAAARWDVWKED 85 (266)
T ss_pred CCcEEEEEecCCCCCCceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCC---CCCCccccCCHHHHHHH
Confidence 4678999998763333576764454111 1100000000001111 23578889983333 21111111234445566
Q ss_pred HHHHHHHHHHhCccccCCceEEEeeccCCCccccccc
Q 042137 111 SYTLLVNWFERLPEYRAREFFLAGESYAGHFVPQACS 147 (253)
Q Consensus 111 ~~~fL~~f~~~fp~~~~~~~~i~GESYaG~YvP~la~ 147 (253)
+..+++ +.+... ..+++|.|+|.||..+-.+|.
T Consensus 86 v~~ai~-~L~~~~---~~~v~LvG~SmGG~vAl~~A~ 118 (266)
T TIGR03101 86 VAAAYR-WLIEQG---HPPVTLWGLRLGALLALDAAN 118 (266)
T ss_pred HHHHHH-HHHhcC---CCCEEEEEECHHHHHHHHHHH
Confidence 554433 343322 358999999999987665543
No 58
>PLN02578 hydrolase
Probab=54.74 E-value=12 Score=34.30 Aligned_cols=59 Identities=10% Similarity=0.033 Sum_probs=38.1
Q ss_pred ccCcCceeeec--cccccccCCccccccCChHHHHHHHHHHHHHHHHhCccccCCceEEEeeccCCCcccccc
Q 042137 76 NSVKYFIMCSS--WSLQQELDFPTRIHHLTMTRTAEDSYTLLVNWFERLPEYRAREFFLAGESYAGHFVPQAC 146 (253)
Q Consensus 76 ~~~anlLfiDq--fSy~~~~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~YvP~la 146 (253)
.+..+++.+|. +..+ ..+ ... .+.+..++++.+|++... ..+++|.|+|+||.-+..+|
T Consensus 110 ~~~~~v~~~D~~G~G~S---~~~-~~~-~~~~~~a~~l~~~i~~~~-------~~~~~lvG~S~Gg~ia~~~A 170 (354)
T PLN02578 110 AKKYKVYALDLLGFGWS---DKA-LIE-YDAMVWRDQVADFVKEVV-------KEPAVLVGNSLGGFTALSTA 170 (354)
T ss_pred hcCCEEEEECCCCCCCC---CCc-ccc-cCHHHHHHHHHHHHHHhc-------cCCeEEEEECHHHHHHHHHH
Confidence 34578999999 4433 211 111 356666777777776542 35899999999998554444
No 59
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=54.68 E-value=14 Score=31.85 Aligned_cols=28 Identities=14% Similarity=0.166 Sum_probs=23.0
Q ss_pred cCCeEEEEecCCccccCchhHHHHHHHh
Q 042137 193 CGIRVYICSGDSDGRVPTTSKRHSINKL 220 (253)
Q Consensus 193 ~girVLiY~Gd~D~i~n~~g~~~wi~~l 220 (253)
-..+||+..|..|.+++....+.+.+.+
T Consensus 222 i~~Pvlli~G~~D~~v~~~~~~~~~~~~ 249 (282)
T TIGR03343 222 IKAKTLVTWGRDDRFVPLDHGLKLLWNM 249 (282)
T ss_pred CCCCEEEEEccCCCcCCchhHHHHHHhC
Confidence 3588999999999999987777766655
No 60
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=52.92 E-value=27 Score=34.31 Aligned_cols=101 Identities=18% Similarity=0.172 Sum_probs=52.2
Q ss_pred CceEEEEEEEeCCCCCCcceecccCCeeeeCCC-Ccccc-CCCCcc-cCcCceeeec--cccccccCCccccccCChHHH
Q 042137 33 GRALFYYFVESANSSTEPLSLAELGPYPVNTDG-KCLSH-SKYARN-SVKYFIMCSS--WSLQQELDFPTRIHHLTMTRT 107 (253)
Q Consensus 33 ~~~lFywf~es~~p~~~Plil~E~GP~~~~~~~-~~l~~-n~~sW~-~~anlLfiDq--fSy~~~~~~~~~~~~~~~~~~ 107 (253)
+..|+..++...+....|+||. ..|+.-.... ..... ...-|. +-..++.+|. +-.+ .......+ ...
T Consensus 6 G~~L~~~~~~P~~~~~~P~Il~-~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S-----~g~~~~~~-~~~ 78 (550)
T TIGR00976 6 GTRLAIDVYRPAGGGPVPVILS-RTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGAS-----EGEFDLLG-SDE 78 (550)
T ss_pred CCEEEEEEEecCCCCCCCEEEE-ecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccC-----CCceEecC-ccc
Confidence 5678887776654445788863 2233311100 00000 001122 2356777787 2211 11111112 456
Q ss_pred HHHHHHHHHHHHHhCccccCCceEEEeeccCCCcc
Q 042137 108 AEDSYTLLVNWFERLPEYRAREFFLAGESYAGHFV 142 (253)
Q Consensus 108 a~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~Yv 142 (253)
++|+.+++. |..+.|. ...++.+.|.||||...
T Consensus 79 ~~D~~~~i~-~l~~q~~-~~~~v~~~G~S~GG~~a 111 (550)
T TIGR00976 79 AADGYDLVD-WIAKQPW-CDGNVGMLGVSYLAVTQ 111 (550)
T ss_pred chHHHHHHH-HHHhCCC-CCCcEEEEEeChHHHHH
Confidence 777776665 5555553 34589999999999653
No 61
>PLN02571 triacylglycerol lipase
Probab=52.09 E-value=11 Score=36.11 Aligned_cols=44 Identities=9% Similarity=0.114 Sum_probs=35.1
Q ss_pred ChHHHHHHHHHHHHHHHHhCccccCCceEEEeeccCCCccccccc
Q 042137 103 TMTRTAEDSYTLLVNWFERLPEYRAREFFLAGESYAGHFVPQACS 147 (253)
Q Consensus 103 ~~~~~a~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~YvP~la~ 147 (253)
+...+.++++..++.+.+++|.. ...++++|+|-||-.+-..|.
T Consensus 202 ~k~Sar~qvl~eV~~L~~~y~~e-~~sI~VTGHSLGGALAtLaA~ 245 (413)
T PLN02571 202 NKTSARDQVLNEVGRLVEKYKDE-EISITICGHSLGAALATLNAV 245 (413)
T ss_pred chhhHHHHHHHHHHHHHHhcCcc-cccEEEeccchHHHHHHHHHH
Confidence 44567788999999999988865 347999999999987766555
No 62
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=51.88 E-value=17 Score=32.87 Aligned_cols=59 Identities=12% Similarity=0.055 Sum_probs=35.4
Q ss_pred cCceeeeccccccccCCccccccCChHHHHHHHHHHHHHHHHhCccccCCceEEEeeccCCCccccccc
Q 042137 79 KYFIMCSSWSLQQELDFPTRIHHLTMTRTAEDSYTLLVNWFERLPEYRAREFFLAGESYAGHFVPQACS 147 (253)
Q Consensus 79 anlLfiDqfSy~~~~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~YvP~la~ 147 (253)
.+++-+|.-.++ .........+.++.++++..+++. +...+++|.|+|+||..+..+|.
T Consensus 158 ~~v~~~d~~g~G---~s~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~lvG~S~Gg~~a~~~a~ 216 (371)
T PRK14875 158 RPVIALDLPGHG---ASSKAVGAGSLDELAAAVLAFLDA-------LGIERAHLVGHSMGGAVALRLAA 216 (371)
T ss_pred CEEEEEcCCCCC---CCCCCCCCCCHHHHHHHHHHHHHh-------cCCccEEEEeechHHHHHHHHHH
Confidence 577888873333 111111113566666666655543 23457999999999998876654
No 63
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=51.45 E-value=25 Score=32.36 Aligned_cols=167 Identities=14% Similarity=0.120 Sum_probs=85.5
Q ss_pred CceEEEEEEEeC-CCCCCcceecccCCeeeeCCCCccccCCCCcccCcC-----ceeeec--ccccccc--CC--ccccc
Q 042137 33 GRALFYYFVESA-NSSTEPLSLAELGPYPVNTDGKCLSHSKYARNSVKY-----FIMCSS--WSLQQEL--DF--PTRIH 100 (253)
Q Consensus 33 ~~~lFywf~es~-~p~~~Plil~E~GP~~~~~~~~~l~~n~~sW~~~an-----lLfiDq--fSy~~~~--~~--~~~~~ 100 (253)
+...-||++... -++..|||+.-+|=-. ++ .-..+-..|++.|. |+|-|+ .+..... +. +.+..
T Consensus 44 g~~r~y~l~vP~g~~~~apLvv~LHG~~~---sg-ag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~~~ 119 (312)
T COG3509 44 GLKRSYRLYVPPGLPSGAPLVVVLHGSGG---SG-AGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPADRR 119 (312)
T ss_pred CCccceEEEcCCCCCCCCCEEEEEecCCC---Ch-HHhhcccchhhhhcccCcEEECcCccccccCCCcccccCCccccc
Confidence 577889999988 7778899996665322 11 12234456777765 467766 2321000 00 11111
Q ss_pred c-CChHHHHHHHHHHHHHHHHhCccccCCceEEEeeccCCCccccccc-cCccccHHHHhhhC----CCCCCc-CChh-h
Q 042137 101 H-LTMTRTAEDSYTLLVNWFERLPEYRAREFFLAGESYAGHFVPQACS-IDPSIQQDFQSNFH----QFKRPS-CDIS-V 172 (253)
Q Consensus 101 ~-~~~~~~a~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~YvP~la~-iN~~I~~~V~~aL~----~~~w~~-cs~~-v 172 (253)
. .++..--.++.+-|..=|. .....+||+|-|-||.+.-.++. - |++-.|+. ...... |... .
T Consensus 120 ~g~ddVgflr~lva~l~~~~g----idp~RVyvtGlS~GG~Ma~~lac~~-----p~~faa~A~VAg~~~~~~a~~~~rp 190 (312)
T COG3509 120 RGVDDVGFLRALVAKLVNEYG----IDPARVYVTGLSNGGRMANRLACEY-----PDIFAAIAPVAGLLALGVACTPPRP 190 (312)
T ss_pred CCccHHHHHHHHHHHHHHhcC----cCcceEEEEeeCcHHHHHHHHHhcC-----cccccceeeeecccCCCcccCCCCc
Confidence 0 1222222333333333222 23458999999999998766654 2 33333443 111333 3211 0
Q ss_pred h--hhcc---CCCCChHHHHHHHHHcCCeEEEEecCCccccCchhHHHHHHHhC
Q 042137 173 S--DTLK---DSPLTVLPIIQELMRCGIRVYICSGDSDGRVPTTSKRHSINKLG 221 (253)
Q Consensus 173 ~--~~~~---d~~~~~~~~l~~LL~~girVLiY~Gd~D~i~n~~g~~~wi~~l~ 221 (253)
. .++. |...+. +-|..- |-.|+.|..+|..-..++.+.++
T Consensus 191 ~~~m~~~G~~Dp~~p~--------~gG~~~-~g~g~~~~~v~~~~~~~~Waa~n 235 (312)
T COG3509 191 VSVMAFHGTADPLNPY--------HGGGVP-IGRGQRDGVVSAADLAARWAAVN 235 (312)
T ss_pred hhHHHhcCCCCCCCCC--------CCCCcc-cccccccccccHHHHHHHHHHhc
Confidence 0 1111 221111 013222 77899999988887777777764
No 64
>COG0400 Predicted esterase [General function prediction only]
Probab=51.38 E-value=18 Score=31.32 Aligned_cols=111 Identities=17% Similarity=0.148 Sum_probs=67.5
Q ss_pred ChHHHHHHHHHHHHHHHHhCccccCCceEEEeeccCCCccccccccCccccHHHHhhhCCCCCCcCChhhhhhccCCCCC
Q 042137 103 TMTRTAEDSYTLLVNWFERLPEYRAREFFLAGESYAGHFVPQACSIDPSIQQDFQSNFHQFKRPSCDISVSDTLKDSPLT 182 (253)
Q Consensus 103 ~~~~~a~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~YvP~la~iN~~I~~~V~~aL~~~~w~~cs~~v~~~~~d~~~~ 182 (253)
+....+..+.+||....+.+.- ..+++.+.|-|-|+..+-.+...++ .-++.++. ++. + .+
T Consensus 75 dl~~~~~~~~~~l~~~~~~~gi-~~~~ii~~GfSqGA~ial~~~l~~~---~~~~~ail------~~g-----~----~~ 135 (207)
T COG0400 75 DLDLETEKLAEFLEELAEEYGI-DSSRIILIGFSQGANIALSLGLTLP---GLFAGAIL------FSG-----M----LP 135 (207)
T ss_pred hHHHHHHHHHHHHHHHHHHhCC-ChhheEEEecChHHHHHHHHHHhCc---hhhccchh------cCC-----c----CC
Confidence 4555666777777777765543 2568999999999886644331010 01122221 010 0 00
Q ss_pred hHHHHHHHHHcCCeEEEEecCCccccCchhHHHHHHHhCCCCccceeeccc
Q 042137 183 VLPIIQELMRCGIRVYICSGDSDGRVPTTSKRHSINKLGALVNTTWYPWHS 233 (253)
Q Consensus 183 ~~~~l~~LL~~girVLiY~Gd~D~i~n~~g~~~wi~~l~w~~~~~~~~w~~ 233 (253)
..+....- ..+.+|++-+|..|.+||..-+++..+.|.=.+.+-+..|+.
T Consensus 136 ~~~~~~~~-~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~ 185 (207)
T COG0400 136 LEPELLPD-LAGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHE 185 (207)
T ss_pred CCCccccc-cCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEec
Confidence 00000111 247999999999999999999999988887666666555553
No 65
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=50.99 E-value=9.7 Score=32.58 Aligned_cols=36 Identities=14% Similarity=0.280 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHhCccccCCceEEEeeccCCCccccccc
Q 042137 109 EDSYTLLVNWFERLPEYRAREFFLAGESYAGHFVPQACS 147 (253)
Q Consensus 109 ~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~YvP~la~ 147 (253)
+++...++...+++|. .+++++|+|-||-.+-.+|.
T Consensus 112 ~~~~~~~~~~~~~~p~---~~i~vtGHSLGGaiA~l~a~ 147 (229)
T cd00519 112 NQVLPELKSALKQYPD---YKIIVTGHSLGGALASLLAL 147 (229)
T ss_pred HHHHHHHHHHHhhCCC---ceEEEEccCHHHHHHHHHHH
Confidence 3444555555555664 48999999999987766655
No 66
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=49.80 E-value=84 Score=28.00 Aligned_cols=29 Identities=21% Similarity=0.310 Sum_probs=24.5
Q ss_pred HHhCccccCCceEEEeeccCCCccccccc
Q 042137 119 FERLPEYRAREFFLAGESYAGHFVPQACS 147 (253)
Q Consensus 119 ~~~fp~~~~~~~~i~GESYaG~YvP~la~ 147 (253)
.-..|...++.+.+.|.|-||.-+-++|.
T Consensus 140 l~t~~~~dktkivlfGrSlGGAvai~las 168 (300)
T KOG4391|consen 140 LMTRPDLDKTKIVLFGRSLGGAVAIHLAS 168 (300)
T ss_pred HhcCccCCcceEEEEecccCCeeEEEeec
Confidence 35688888999999999999987777764
No 67
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=49.16 E-value=1.4e+02 Score=27.77 Aligned_cols=112 Identities=21% Similarity=0.246 Sum_probs=0.0
Q ss_pred CccccccccCCCCCC-CCCcceEEeEEEecCCCCceEEEEEEEeCCCCCCcceecccC-CeeeeCCCCccccCCCCcccC
Q 042137 1 MELIKLKGFYLGQPN-GGEIDQHSGYVTVDAKAGRALFYYFVESANSSTEPLSLAELG-PYPVNTDGKCLSHSKYARNSV 78 (253)
Q Consensus 1 ~~~~~~v~~lPg~~~-~~~~~~ysGyi~v~~~~~~~lFywf~es~~p~~~Plil~E~G-P~~~~~~~~~l~~n~~sW~~~ 78 (253)
+-+.-++..-|+.+. ..+.....+|+++. + +++++.+. -+++.|+|+.-+| | ..-|||-..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~hk~~~~~---g--I~~h~~e~-g~~~gP~illlHGfP-----------e~wyswr~q 63 (322)
T KOG4178|consen 1 LLFCYLVFEDPQPPTPLNLSAISHKFVTYK---G--IRLHYVEG-GPGDGPIVLLLHGFP-----------ESWYSWRHQ 63 (322)
T ss_pred CCcccccCCCCCCCCccChhhcceeeEEEc---c--EEEEEEee-cCCCCCEEEEEccCC-----------ccchhhhhh
Q ss_pred --------cCceeeec--cccccccCCccccccCChHHHHHHHHHHHHHHHHhCccccCCceEEEeeccCC
Q 042137 79 --------KYFIMCSS--WSLQQELDFPTRIHHLTMTRTAEDSYTLLVNWFERLPEYRAREFFLAGESYAG 139 (253)
Q Consensus 79 --------anlLfiDq--fSy~~~~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG 139 (253)
..++.+|. |-.+ +.+......+....+.|+..+|...= ....++.|++||+
T Consensus 64 ~~~la~~~~rviA~DlrGyG~S---d~P~~~~~Yt~~~l~~di~~lld~Lg-------~~k~~lvgHDwGa 124 (322)
T KOG4178|consen 64 IPGLASRGYRVIAPDLRGYGFS---DAPPHISEYTIDELVGDIVALLDHLG-------LKKAFLVGHDWGA 124 (322)
T ss_pred hhhhhhcceEEEecCCCCCCCC---CCCCCcceeeHHHHHHHHHHHHHHhc-------cceeEEEeccchh
No 68
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=49.12 E-value=11 Score=30.74 Aligned_cols=29 Identities=17% Similarity=0.031 Sum_probs=23.4
Q ss_pred cCCeEEEEecCCccccCchhHHHHHHHhC
Q 042137 193 CGIRVYICSGDSDGRVPTTSKRHSINKLG 221 (253)
Q Consensus 193 ~girVLiY~Gd~D~i~n~~g~~~wi~~l~ 221 (253)
-..+||+.+|..|.+++....+...+.+.
T Consensus 187 i~~Pvlii~g~~D~~~~~~~~~~~~~~~~ 215 (245)
T TIGR01738 187 ISVPFLRLYGYLDGLVPAKVVPYLDKLAP 215 (245)
T ss_pred CCCCEEEEeecCCcccCHHHHHHHHHhCC
Confidence 36899999999999999888776655553
No 69
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=48.50 E-value=19 Score=33.96 Aligned_cols=64 Identities=17% Similarity=0.229 Sum_probs=36.6
Q ss_pred ccCcCceeeec--cccccccCCccccccCChHHHHHHHHHHHHHHHHhCccccCCceEEEeeccCCCcccccc
Q 042137 76 NSVKYFIMCSS--WSLQQELDFPTRIHHLTMTRTAEDSYTLLVNWFERLPEYRAREFFLAGESYAGHFVPQAC 146 (253)
Q Consensus 76 ~~~anlLfiDq--fSy~~~~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~YvP~la 146 (253)
.+..+++.+|. +..+ ... .....+.+.+...+.+.+..|.+.. ...+++|.|+|+||.-+-.+|
T Consensus 129 ~~~~~vi~~D~rG~G~S---~~~-~~~~~~~~~~~~~~~~~i~~~~~~l---~~~~~~lvGhS~GG~la~~~a 194 (402)
T PLN02894 129 ASRFRVIAIDQLGWGGS---SRP-DFTCKSTEETEAWFIDSFEEWRKAK---NLSNFILLGHSFGGYVAAKYA 194 (402)
T ss_pred HhCCEEEEECCCCCCCC---CCC-CcccccHHHHHHHHHHHHHHHHHHc---CCCCeEEEEECHHHHHHHHHH
Confidence 34578999999 4333 211 1111133444444555566665432 334799999999998654433
No 70
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=47.28 E-value=19 Score=32.43 Aligned_cols=31 Identities=26% Similarity=0.304 Sum_probs=27.9
Q ss_pred CCeEEEEecCCccccCchhHHHHHHHhCCCC
Q 042137 194 GIRVYICSGDSDGRVPTTSKRHSINKLGALV 224 (253)
Q Consensus 194 girVLiY~Gd~D~i~n~~g~~~wi~~l~w~~ 224 (253)
..+|+||+|..|-++|+..+++.++++-=.|
T Consensus 219 ~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G 249 (290)
T PF03583_consen 219 TVPVLIYQGTADEVVPPADTDALVAKWCAAG 249 (290)
T ss_pred CCCEEEEecCCCCCCChHHHHHHHHHHHHcC
Confidence 4799999999999999999999999886555
No 71
>PRK03592 haloalkane dehalogenase; Provisional
Probab=46.35 E-value=22 Score=31.21 Aligned_cols=59 Identities=10% Similarity=0.050 Sum_probs=37.6
Q ss_pred cCcCceeeec--cccccccCCccccccCChHHHHHHHHHHHHHHHHhCccccCCceEEEeeccCCCccccccc
Q 042137 77 SVKYFIMCSS--WSLQQELDFPTRIHHLTMTRTAEDSYTLLVNWFERLPEYRAREFFLAGESYAGHFVPQACS 147 (253)
Q Consensus 77 ~~anlLfiDq--fSy~~~~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~YvP~la~ 147 (253)
+...++-+|. |-.+ +.+.. . .+....|+++..+++.. ...+++|.|+|.||..+-.+|.
T Consensus 52 ~~~~via~D~~G~G~S---~~~~~-~-~~~~~~a~dl~~ll~~l-------~~~~~~lvGhS~Gg~ia~~~a~ 112 (295)
T PRK03592 52 GLGRCLAPDLIGMGAS---DKPDI-D-YTFADHARYLDAWFDAL-------GLDDVVLVGHDWGSALGFDWAA 112 (295)
T ss_pred hCCEEEEEcCCCCCCC---CCCCC-C-CCHHHHHHHHHHHHHHh-------CCCCeEEEEECHHHHHHHHHHH
Confidence 3457889999 4443 22211 1 36677777777666553 3358999999999986544443
No 72
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=45.80 E-value=16 Score=32.29 Aligned_cols=28 Identities=11% Similarity=0.005 Sum_probs=23.8
Q ss_pred CCeEEEEecCCccccCchhHHHHHHHhC
Q 042137 194 GIRVYICSGDSDGRVPTTSKRHSINKLG 221 (253)
Q Consensus 194 girVLiY~Gd~D~i~n~~g~~~wi~~l~ 221 (253)
.+++++..|..|.++|..-.++..+.+.
T Consensus 211 ~vP~l~I~g~~D~~ip~~~~~~m~~~~~ 238 (273)
T PLN02211 211 KVPRVYIKTLHDHVVKPEQQEAMIKRWP 238 (273)
T ss_pred ccceEEEEeCCCCCCCHHHHHHHHHhCC
Confidence 4799999999999999988877777654
No 73
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=44.43 E-value=23 Score=26.93 Aligned_cols=73 Identities=19% Similarity=0.261 Sum_probs=47.2
Q ss_pred cCCceEEEeeccCCCccccccccCccccHHHHhhhCCCCCCcCChhhhhhccCCCCChHHHHHHHHHcCCeEEEEecCCc
Q 042137 126 RAREFFLAGESYAGHFVPQACSIDPSIQQDFQSNFHQFKRPSCDISVSDTLKDSPLTVLPIIQELMRCGIRVYICSGDSD 205 (253)
Q Consensus 126 ~~~~~~i~GESYaG~YvP~la~iN~~I~~~V~~aL~~~~w~~cs~~v~~~~~d~~~~~~~~l~~LL~~girVLiY~Gd~D 205 (253)
..+++++.|.|.||..+..++.-+ +.|+.++--..| +..+.+-...++|++..|+.|
T Consensus 59 ~~~~i~l~G~S~Gg~~a~~~~~~~----~~v~~~v~~~~~-------------------~~~~~~~~~~~pv~~i~g~~D 115 (145)
T PF12695_consen 59 DPDRIILIGHSMGGAIAANLAARN----PRVKAVVLLSPY-------------------PDSEDLAKIRIPVLFIHGEND 115 (145)
T ss_dssp TCCEEEEEEETHHHHHHHHHHHHS----TTESEEEEESES-------------------SGCHHHTTTTSEEEEEEETT-
T ss_pred CCCcEEEEEEccCcHHHHHHhhhc----cceeEEEEecCc-------------------cchhhhhccCCcEEEEEECCC
Confidence 567999999999999775555200 122222210011 111223344579999999999
Q ss_pred cccCchhHHHHHHHhC
Q 042137 206 GRVPTTSKRHSINKLG 221 (253)
Q Consensus 206 ~i~n~~g~~~wi~~l~ 221 (253)
.+++....++..+++.
T Consensus 116 ~~~~~~~~~~~~~~~~ 131 (145)
T PF12695_consen 116 PLVPPEQVRRLYEALP 131 (145)
T ss_dssp SSSHHHHHHHHHHHHC
T ss_pred CcCCHHHHHHHHHHcC
Confidence 9999999999888888
No 74
>PRK10749 lysophospholipase L2; Provisional
Probab=44.19 E-value=18 Score=32.83 Aligned_cols=28 Identities=4% Similarity=-0.002 Sum_probs=25.2
Q ss_pred CCeEEEEecCCccccCchhHHHHHHHhC
Q 042137 194 GIRVYICSGDSDGRVPTTSKRHSINKLG 221 (253)
Q Consensus 194 girVLiY~Gd~D~i~n~~g~~~wi~~l~ 221 (253)
.++|||..|+.|.+|+..+++++.+.+.
T Consensus 259 ~~P~Lii~G~~D~vv~~~~~~~~~~~l~ 286 (330)
T PRK10749 259 TTPLLLLQAEEERVVDNRMHDRFCEART 286 (330)
T ss_pred CCCEEEEEeCCCeeeCHHHHHHHHHHHh
Confidence 5899999999999999999988887763
No 75
>PRK10349 carboxylesterase BioH; Provisional
Probab=42.85 E-value=22 Score=30.35 Aligned_cols=53 Identities=13% Similarity=0.046 Sum_probs=0.0
Q ss_pred cCcCceeeec--cccccccCCccccccCChHHHHHHHHHHHHHHHHhCccccCCceEEEeeccCCCcccccc
Q 042137 77 SVKYFIMCSS--WSLQQELDFPTRIHHLTMTRTAEDSYTLLVNWFERLPEYRAREFFLAGESYAGHFVPQAC 146 (253)
Q Consensus 77 ~~anlLfiDq--fSy~~~~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~YvP~la 146 (253)
+...++.+|. +..+ .....+ +.++.++++.+ +...++.+.|+|+||.-+..+|
T Consensus 38 ~~~~vi~~Dl~G~G~S---~~~~~~---~~~~~~~~l~~-----------~~~~~~~lvGhS~Gg~ia~~~a 92 (256)
T PRK10349 38 SHFTLHLVDLPGFGRS---RGFGAL---SLADMAEAVLQ-----------QAPDKAIWLGWSLGGLVASQIA 92 (256)
T ss_pred cCCEEEEecCCCCCCC---CCCCCC---CHHHHHHHHHh-----------cCCCCeEEEEECHHHHHHHHHH
No 76
>PLN02934 triacylglycerol lipase
Probab=42.57 E-value=27 Score=34.43 Aligned_cols=36 Identities=14% Similarity=0.151 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHhCccccCCceEEEeeccCCCccccccc
Q 042137 109 EDSYTLLVNWFERLPEYRAREFFLAGESYAGHFVPQACS 147 (253)
Q Consensus 109 ~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~YvP~la~ 147 (253)
.++...++++.+++|.+ +++++|+|-||-.+-..|.
T Consensus 305 ~~v~~~lk~ll~~~p~~---kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 305 YAVRSKLKSLLKEHKNA---KFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHHCCCC---eEEEeccccHHHHHHHHHH
Confidence 45777888888888875 7999999999987766554
No 77
>PRK13604 luxD acyl transferase; Provisional
Probab=42.28 E-value=33 Score=31.52 Aligned_cols=181 Identities=12% Similarity=0.136 Sum_probs=90.3
Q ss_pred CCceEEEEEEEeC--CCCCCcceecccCCeeeeCCCCccccCCCCcccCcCceeeeccc-cccccCCccccccCChHHHH
Q 042137 32 AGRALFYYFVESA--NSSTEPLSLAELGPYPVNTDGKCLSHSKYARNSVKYFIMCSSWS-LQQELDFPTRIHHLTMTRTA 108 (253)
Q Consensus 32 ~~~~lFywf~es~--~p~~~Plil~E~GP~~~~~~~~~l~~n~~sW~~~anlLfiDqfS-y~~~~~~~~~~~~~~~~~~a 108 (253)
.+..|.=|+..++ ++...|+||.-+|.-. +.+ .-...-.+=+.+-.++|-.|... .+ .++.++...+.....
T Consensus 18 dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~-~~~-~~~~~A~~La~~G~~vLrfD~rg~~G---eS~G~~~~~t~s~g~ 92 (307)
T PRK13604 18 NGQSIRVWETLPKENSPKKNNTILIASGFAR-RMD-HFAGLAEYLSSNGFHVIRYDSLHHVG---LSSGTIDEFTMSIGK 92 (307)
T ss_pred CCCEEEEEEEcCcccCCCCCCEEEEeCCCCC-ChH-HHHHHHHHHHHCCCEEEEecCCCCCC---CCCCccccCcccccH
Confidence 3678888888886 4456677775555433 111 11122233345556778777522 23 222222111222224
Q ss_pred HHHHHHHHHHHHhCccccCCceEEEeeccCCCccccccc-cC--------cc--ccHHHHhhhCC----CCCCcCCh---
Q 042137 109 EDSYTLLVNWFERLPEYRAREFFLAGESYAGHFVPQACS-ID--------PS--IQQDFQSNFHQ----FKRPSCDI--- 170 (253)
Q Consensus 109 ~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~YvP~la~-iN--------~~--I~~~V~~aL~~----~~w~~cs~--- 170 (253)
.|+..++ .|.+.. ...++.|.|+|.||.-+...|. .+ |. +..-+++.+.. ..+..-..
T Consensus 93 ~Dl~aai-d~lk~~---~~~~I~LiG~SmGgava~~~A~~~~v~~lI~~sp~~~l~d~l~~~~~~~~~~~p~~~lp~~~d 168 (307)
T PRK13604 93 NSLLTVV-DWLNTR---GINNLGLIAASLSARIAYEVINEIDLSFLITAVGVVNLRDTLERALGYDYLSLPIDELPEDLD 168 (307)
T ss_pred HHHHHHH-HHHHhc---CCCceEEEEECHHHHHHHHHhcCCCCCEEEEcCCcccHHHHHHHhhhcccccCcccccccccc
Confidence 4553322 233332 1347999999999987644443 21 10 12222322320 01111000
Q ss_pred ----hhh-hhc-cC----CCCChHHHHHHHHHcCCeEEEEecCCccccCchhHHHHHHHhC
Q 042137 171 ----SVS-DTL-KD----SPLTVLPIIQELMRCGIRVYICSGDSDGRVPTTSKRHSINKLG 221 (253)
Q Consensus 171 ----~v~-~~~-~d----~~~~~~~~l~~LL~~girVLiY~Gd~D~i~n~~g~~~wi~~l~ 221 (253)
.+. ..| .+ ...+....++.+-+-..+||+.+|+.|..||..+.++..++++
T Consensus 169 ~~g~~l~~~~f~~~~~~~~~~~~~s~i~~~~~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~ 229 (307)
T PRK13604 169 FEGHNLGSEVFVTDCFKHGWDTLDSTINKMKGLDIPFIAFTANNDSWVKQSEVIDLLDSIR 229 (307)
T ss_pred cccccccHHHHHHHHHhcCccccccHHHHHhhcCCCEEEEEcCCCCccCHHHHHHHHHHhc
Confidence 000 011 11 0111222233333335899999999999999999999999875
No 78
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=41.65 E-value=32 Score=33.49 Aligned_cols=39 Identities=13% Similarity=0.210 Sum_probs=33.6
Q ss_pred ChHHHHHHHHHcCCeEEEEecCCccccCchhHHHHHHHh
Q 042137 182 TVLPIIQELMRCGIRVYICSGDSDGRVPTTSKRHSINKL 220 (253)
Q Consensus 182 ~~~~~l~~LL~~girVLiY~Gd~D~i~n~~g~~~wi~~l 220 (253)
..-+.|....++|=|+|+|+|-.|.+++..+|.++-+++
T Consensus 341 a~~pDLsaF~~~GGKLI~~HG~aD~~I~p~~ti~YY~~V 379 (474)
T PF07519_consen 341 ATDPDLSAFRARGGKLILYHGWADPLIPPQGTIDYYERV 379 (474)
T ss_pred CCCcCHHHHHhcCCeEEEEecCCCCccCCCcHHHHHHHH
Confidence 344677778889999999999999999999999887765
No 79
>PRK05855 short chain dehydrogenase; Validated
Probab=41.63 E-value=40 Score=32.43 Aligned_cols=56 Identities=14% Similarity=0.099 Sum_probs=35.4
Q ss_pred cCcCceeeec--cccccccCCccccccCChHHHHHHHHHHHHHHHHhCccccCCceEEEeeccCCCc
Q 042137 77 SVKYFIMCSS--WSLQQELDFPTRIHHLTMTRTAEDSYTLLVNWFERLPEYRAREFFLAGESYAGHF 141 (253)
Q Consensus 77 ~~anlLfiDq--fSy~~~~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~Y 141 (253)
+...++.+|. +..+ .........+.+..++++..+++..- ...+++|.|+|+||..
T Consensus 50 ~~~~Vi~~D~~G~G~S---~~~~~~~~~~~~~~a~dl~~~i~~l~------~~~~~~lvGhS~Gg~~ 107 (582)
T PRK05855 50 DRFRVVAYDVRGAGRS---SAPKRTAAYTLARLADDFAAVIDAVS------PDRPVHLLAHDWGSIQ 107 (582)
T ss_pred cceEEEEecCCCCCCC---CCCCcccccCHHHHHHHHHHHHHHhC------CCCcEEEEecChHHHH
Confidence 3467888998 4333 11111111367888888888887531 1346999999999943
No 80
>COG4099 Predicted peptidase [General function prediction only]
Probab=41.14 E-value=1.8e+02 Score=27.13 Aligned_cols=164 Identities=15% Similarity=0.175 Sum_probs=81.5
Q ss_pred CCCceEEEEEEEeC--CCCC--CcceecccCCeeeeCCCC-ccccCCCCcccCcCceeeec-cccccccCCccccccCCh
Q 042137 31 KAGRALFYYFVESA--NSST--EPLSLAELGPYPVNTDGK-CLSHSKYARNSVKYFIMCSS-WSLQQELDFPTRIHHLTM 104 (253)
Q Consensus 31 ~~~~~lFywf~es~--~p~~--~Plil~E~GP~~~~~~~~-~l~~n~~sW~~~anlLfiDq-fSy~~~~~~~~~~~~~~~ 104 (253)
..+..|=|-||..+ +|.+ .||+|.-+|-=....|.. .+..+. -..|-..+-|| |=.+ ++-+ .-+. .++
T Consensus 169 ~tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~l~sg~---gaiawa~pedqcfVlA-PQy~-~if~-d~e 242 (387)
T COG4099 169 STGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKVLSSGI---GAIAWAGPEDQCFVLA-PQYN-PIFA-DSE 242 (387)
T ss_pred ccCceeeEEEecccccCCCCccccEEEEEecCCCCCchhhhhhhcCc---cceeeecccCceEEEc-cccc-cccc-ccc
Confidence 35789999999996 5533 499995555444333321 122121 11222223333 2211 0000 0011 011
Q ss_pred HHHHH---HHHHHHHHHHHhCccccCCceEEEeeccCCCccccccccCccccHHHHhhhCCCCCCcCChhhhhhccCCCC
Q 042137 105 TRTAE---DSYTLLVNWFERLPEYRAREFFLAGESYAGHFVPQACSIDPSIQQDFQSNFHQFKRPSCDISVSDTLKDSPL 181 (253)
Q Consensus 105 ~~~a~---~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~YvP~la~iN~~I~~~V~~aL~~~~w~~cs~~v~~~~~d~~~ 181 (253)
+.+.. ...+.+.+=...++..-.+++|+.|-|-||.-.=+++. + .|+.-.|.= -.|... |.
T Consensus 243 ~~t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~---k-fPdfFAaa~----~iaG~~------d~-- 306 (387)
T COG4099 243 EKTLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAE---K-FPDFFAAAV----PIAGGG------DR-- 306 (387)
T ss_pred cccchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHH---h-Cchhhheee----eecCCC------ch--
Confidence 11121 22333333344567777889999999998874433331 0 233333221 111110 11
Q ss_pred ChHHHHHHHHHcCCeEEEEecCCccccCchhHHHHHHHh
Q 042137 182 TVLPIIQELMRCGIRVYICSGDSDGRVPTTSKRHSINKL 220 (253)
Q Consensus 182 ~~~~~l~~LL~~girVLiY~Gd~D~i~n~~g~~~wi~~l 220 (253)
...++ -|+ +.+++|+++..|.++|..+..--..+|
T Consensus 307 --v~lv~-~lk-~~piWvfhs~dDkv~Pv~nSrv~y~~l 341 (387)
T COG4099 307 --VYLVR-TLK-KAPIWVFHSSDDKVIPVSNSRVLYERL 341 (387)
T ss_pred --hhhhh-hhc-cCceEEEEecCCCccccCcceeehHHH
Confidence 12222 232 489999999999999998886555554
No 81
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=40.70 E-value=87 Score=29.17 Aligned_cols=110 Identities=15% Similarity=0.135 Sum_probs=59.8
Q ss_pred CCceEEEEEEEeC--CC-CCCcceecccC-CeeeeCCCCccccCCCCcc-cCcCceeeec-cccccccCCccccccCChH
Q 042137 32 AGRALFYYFVESA--NS-STEPLSLAELG-PYPVNTDGKCLSHSKYARN-SVKYFIMCSS-WSLQQELDFPTRIHHLTMT 105 (253)
Q Consensus 32 ~~~~lFywf~es~--~p-~~~Plil~E~G-P~~~~~~~~~l~~n~~sW~-~~anlLfiDq-fSy~~~~~~~~~~~~~~~~ 105 (253)
...+++-+.|... .+ ..+|+|+.=+| =|.+..-......+-.++. ..++.+-|-. |--+ . ...++. .-+
T Consensus 70 ~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLA---P-Eh~~Pa-~y~ 144 (336)
T KOG1515|consen 70 PFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLA---P-EHPFPA-AYD 144 (336)
T ss_pred CCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccC---C-CCCCCc-cch
Confidence 4688999999998 34 68999994433 3333221111122222332 4556555544 4333 1 112331 222
Q ss_pred HHHHHHHHHHHH-HHHhCccccCCceEEEeeccCCCccccccc-c
Q 042137 106 RTAEDSYTLLVN-WFERLPEYRAREFFLAGESYAGHFVPQACS-I 148 (253)
Q Consensus 106 ~~a~~~~~fL~~-f~~~fp~~~~~~~~i~GESYaG~YvP~la~-i 148 (253)
+.-+.+.-++++ |....-..+ .++|+|.|-||.-+-.+|. +
T Consensus 145 D~~~Al~w~~~~~~~~~~~D~~--rv~l~GDSaGGNia~~va~r~ 187 (336)
T KOG1515|consen 145 DGWAALKWVLKNSWLKLGADPS--RVFLAGDSAGGNIAHVVAQRA 187 (336)
T ss_pred HHHHHHHHHHHhHHHHhCCCcc--cEEEEccCccHHHHHHHHHHH
Confidence 222333333333 555544443 3999999999998888887 5
No 82
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=40.00 E-value=8.6 Score=36.78 Aligned_cols=40 Identities=10% Similarity=0.154 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHhCccccCCceEEEeeccCCCcccccccc
Q 042137 109 EDSYTLLVNWFERLPEYRAREFFLAGESYAGHFVPQACSI 148 (253)
Q Consensus 109 ~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~YvP~la~i 148 (253)
..++..+..+...-|+.-...+-++|-|+||.|++.+|.+
T Consensus 242 ~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~l 281 (411)
T PF06500_consen 242 SRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAAL 281 (411)
T ss_dssp CHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHh
Confidence 4567777888888999999999999999999999998864
No 83
>PLN02162 triacylglycerol lipase
Probab=39.51 E-value=27 Score=33.99 Aligned_cols=36 Identities=17% Similarity=0.234 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHhCccccCCceEEEeeccCCCccccccc
Q 042137 109 EDSYTLLVNWFERLPEYRAREFFLAGESYAGHFVPQACS 147 (253)
Q Consensus 109 ~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~YvP~la~ 147 (253)
..+.+.|+.+..++|.+ +++++|+|-||-.+-..|.
T Consensus 262 ~~I~~~L~~lL~k~p~~---kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 262 YTIRQMLRDKLARNKNL---KYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHHHhCCCc---eEEEEecChHHHHHHHHHH
Confidence 34556677777788865 7999999999987655544
No 84
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=39.44 E-value=1.1e+02 Score=29.91 Aligned_cols=111 Identities=12% Similarity=0.113 Sum_probs=0.0
Q ss_pred CCCCCCCCcceEEeEEEecCCCCceEEEEEEEeCCCCCCcceecccCCeeeeCCCCccccCCCCcc------------cC
Q 042137 11 LGQPNGGEIDQHSGYVTVDAKAGRALFYYFVESANSSTEPLSLAELGPYPVNTDGKCLSHSKYARN------------SV 78 (253)
Q Consensus 11 Pg~~~~~~~~~ysGyi~v~~~~~~~lFywf~es~~p~~~Plil~E~GP~~~~~~~~~l~~n~~sW~------------~~ 78 (253)
|-|+. -..+.-.-|++.+ +..|||+.....++...|.||.=+|=.. +...|. +.
T Consensus 167 ~~~~~-~~~~~~~~~~~~~---~~~l~~~~~gp~~~~~k~~VVLlHG~~~----------s~~~W~~~~~~~L~~~~~~~ 232 (481)
T PLN03087 167 PRWSD-CDCKFCTSWLSSS---NESLFVHVQQPKDNKAKEDVLFIHGFIS----------SSAFWTETLFPNFSDAAKST 232 (481)
T ss_pred Ccccc-cccceeeeeEeeC---CeEEEEEEecCCCCCCCCeEEEECCCCc----------cHHHHHHHHHHHHHHHhhCC
Q ss_pred cCceeeec--cccccccCCccccccCChHHHHHHH-HHHHHHHHHhCccccCCceEEEeeccCCCcccccc
Q 042137 79 KYFIMCSS--WSLQQELDFPTRIHHLTMTRTAEDS-YTLLVNWFERLPEYRAREFFLAGESYAGHFVPQAC 146 (253)
Q Consensus 79 anlLfiDq--fSy~~~~~~~~~~~~~~~~~~a~~~-~~fL~~f~~~fp~~~~~~~~i~GESYaG~YvP~la 146 (253)
..++.+|. |..+ ..+.+.. .+.++.++++ ..++.. +...+++|.|+|.||..+-.+|
T Consensus 233 yrVia~Dl~G~G~S---~~p~~~~-ytl~~~a~~l~~~ll~~-------lg~~k~~LVGhSmGG~iAl~~A 292 (481)
T PLN03087 233 YRLFAVDLLGFGRS---PKPADSL-YTLREHLEMIERSVLER-------YKVKSFHIVAHSLGCILALALA 292 (481)
T ss_pred CEEEEECCCCCCCC---cCCCCCc-CCHHHHHHHHHHHHHHH-------cCCCCEEEEEECHHHHHHHHHH
No 85
>PLN00413 triacylglycerol lipase
Probab=38.98 E-value=24 Score=34.39 Aligned_cols=36 Identities=22% Similarity=0.322 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHhCccccCCceEEEeeccCCCccccccc
Q 042137 109 EDSYTLLVNWFERLPEYRAREFFLAGESYAGHFVPQACS 147 (253)
Q Consensus 109 ~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~YvP~la~ 147 (253)
.++...|++..+.+|++ +++++|+|.||..+-..|.
T Consensus 268 y~i~~~Lk~ll~~~p~~---kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 268 YTILRHLKEIFDQNPTS---KFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHHHCCCC---eEEEEecCHHHHHHHHHHH
Confidence 46677888888888855 7999999999998766654
No 86
>PLN02408 phospholipase A1
Probab=38.57 E-value=32 Score=32.44 Aligned_cols=42 Identities=7% Similarity=0.069 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHHHhCccccCCceEEEeeccCCCccccccc
Q 042137 105 TRTAEDSYTLLVNWFERLPEYRAREFFLAGESYAGHFVPQACS 147 (253)
Q Consensus 105 ~~~a~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~YvP~la~ 147 (253)
..+.+++.+.++++.+++|.. ...+.|+|+|-||-.+-..|.
T Consensus 178 ~s~r~qVl~eI~~ll~~y~~~-~~sI~vTGHSLGGALAtLaA~ 219 (365)
T PLN02408 178 PSLQEMVREEIARLLQSYGDE-PLSLTITGHSLGAALATLTAY 219 (365)
T ss_pred hhHHHHHHHHHHHHHHhcCCC-CceEEEeccchHHHHHHHHHH
Confidence 356778888899999988865 336999999999987665554
No 87
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=37.79 E-value=50 Score=30.13 Aligned_cols=38 Identities=24% Similarity=0.389 Sum_probs=30.2
Q ss_pred ChHHHHHHHHHHHHHHHHhCccccCCceEEEeeccCCC
Q 042137 103 TMTRTAEDSYTLLVNWFERLPEYRAREFFLAGESYAGH 140 (253)
Q Consensus 103 ~~~~~a~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~ 140 (253)
.-.++++.|++.+..-....|+=..-++|+.|||-|..
T Consensus 84 ~a~~a~~aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa~ 121 (289)
T PF10081_consen 84 AAREAARALFEAVYARWSTLPEDRRPKLYLYGESLGAY 121 (289)
T ss_pred hHHHHHHHHHHHHHHHHHhCCcccCCeEEEeccCcccc
Confidence 45677788888888888888876555799999998654
No 88
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=37.74 E-value=29 Score=29.13 Aligned_cols=96 Identities=18% Similarity=0.243 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHHHHHhCccccCCceEEEeeccCCCccccccccCccccHHHHhhhCCCCCCcCChhhhhhccCCCCChHH
Q 042137 106 RTAEDSYTLLVNWFERLPEYRAREFFLAGESYAGHFVPQACSIDPSIQQDFQSNFHQFKRPSCDISVSDTLKDSPLTVLP 185 (253)
Q Consensus 106 ~~a~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~YvP~la~iN~~I~~~V~~aL~~~~w~~cs~~v~~~~~d~~~~~~~ 185 (253)
...+++. ....++...|+....++-+.|-|+||.++=.+|. .. ..+.-.| .+.- ......
T Consensus 77 ~~~~~~~-aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~-------------~~---~~~~a~v--~~yg-~~~~~~ 136 (218)
T PF01738_consen 77 QVAADLQ-AAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAA-------------RD---PRVDAAV--SFYG-GSPPPP 136 (218)
T ss_dssp HHHHHHH-HHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHC-------------CT---TTSSEEE--EES--SSSGGG
T ss_pred HHHHHHH-HHHHHHHhccccCCCcEEEEEEecchHHhhhhhh-------------hc---cccceEE--EEcC-CCCCCc
Confidence 3344443 3345666777667779999999999987644331 00 1111111 0000 001222
Q ss_pred HHHHHHHcCCeEEEEecCCccccCchhHHHHHHHhC
Q 042137 186 IIQELMRCGIRVYICSGDSDGRVPTTSKRHSINKLG 221 (253)
Q Consensus 186 ~l~~LL~~girVLiY~Gd~D~i~n~~g~~~wi~~l~ 221 (253)
.+...-+-..+||+..|..|..++....++..+.|.
T Consensus 137 ~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~ 172 (218)
T PF01738_consen 137 PLEDAPKIKAPVLILFGENDPFFPPEEVEALEEALK 172 (218)
T ss_dssp HHHHGGG--S-EEEEEETT-TTS-HHHHHHHHHHHH
T ss_pred chhhhcccCCCEeecCccCCCCCChHHHHHHHHHHH
Confidence 233333446899999999999999998888888883
No 89
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=37.27 E-value=11 Score=34.77 Aligned_cols=66 Identities=12% Similarity=0.033 Sum_probs=41.6
Q ss_pred cCcCceeeeccccccccCCccccc--cCChHHHHHHHHHHHHHHHHhCccccCCceEEEeeccCCCccccccc-c
Q 042137 77 SVKYFIMCSSWSLQQELDFPTRIH--HLTMTRTAEDSYTLLVNWFERLPEYRAREFFLAGESYAGHFVPQACS-I 148 (253)
Q Consensus 77 ~~anlLfiDqfSy~~~~~~~~~~~--~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~YvP~la~-i 148 (253)
...|||.||= |.. ... .|. ..+...+++.+..||+.+...+ .+....++|.|+|.|+|-+=.+++ +
T Consensus 103 ~d~NVI~VDW-s~~---a~~-~Y~~a~~n~~~vg~~la~~l~~L~~~~-g~~~~~ihlIGhSLGAHvaG~aG~~~ 171 (331)
T PF00151_consen 103 GDYNVIVVDW-SRG---ASN-NYPQAVANTRLVGRQLAKFLSFLINNF-GVPPENIHLIGHSLGAHVAGFAGKYL 171 (331)
T ss_dssp S-EEEEEEE--HHH---HSS--HHHHHHHHHHHHHHHHHHHHHHHHHH----GGGEEEEEETCHHHHHHHHHHHT
T ss_pred CCceEEEEcc-hhh---ccc-cccchhhhHHHHHHHHHHHHHHHHhhc-CCChhHEEEEeeccchhhhhhhhhhc
Confidence 3679999994 433 111 121 1356677788888887776432 233568999999999997777776 6
No 90
>PLN02753 triacylglycerol lipase
Probab=36.81 E-value=39 Score=33.46 Aligned_cols=46 Identities=13% Similarity=0.098 Sum_probs=36.4
Q ss_pred CChHHHHHHHHHHHHHHHHhCcc--ccCCceEEEeeccCCCccccccc
Q 042137 102 LTMTRTAEDSYTLLVNWFERLPE--YRAREFFLAGESYAGHFVPQACS 147 (253)
Q Consensus 102 ~~~~~~a~~~~~fL~~f~~~fp~--~~~~~~~i~GESYaG~YvP~la~ 147 (253)
.+...+.+++...++...+++|. .....++|+|+|-||--+-..|.
T Consensus 284 ~~k~S~reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 284 FAKFSAREQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred cchhhHHHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHH
Confidence 35667889999999999998874 23458999999999987766665
No 91
>PLN02324 triacylglycerol lipase
Probab=36.05 E-value=43 Score=32.17 Aligned_cols=44 Identities=14% Similarity=0.080 Sum_probs=34.9
Q ss_pred ChHHHHHHHHHHHHHHHHhCccccCCceEEEeeccCCCccccccc
Q 042137 103 TMTRTAEDSYTLLVNWFERLPEYRAREFFLAGESYAGHFVPQACS 147 (253)
Q Consensus 103 ~~~~~a~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~YvP~la~ 147 (253)
+...+.+++...++++.+++|.. ...+.|+|+|-||--+-..|.
T Consensus 191 ~k~SareqVl~eV~~L~~~Yp~e-~~sItvTGHSLGGALAtLaA~ 234 (415)
T PLN02324 191 DTTSAQEQVQGELKRLLELYKNE-EISITFTGHSLGAVMSVLSAA 234 (415)
T ss_pred chhHHHHHHHHHHHHHHHHCCCC-CceEEEecCcHHHHHHHHHHH
Confidence 55677888999999999988853 237999999999987665554
No 92
>PLN02719 triacylglycerol lipase
Probab=35.37 E-value=24 Score=34.81 Aligned_cols=46 Identities=15% Similarity=0.176 Sum_probs=36.7
Q ss_pred ChHHHHHHHHHHHHHHHHhCcccc--CCceEEEeeccCCCccccccc-c
Q 042137 103 TMTRTAEDSYTLLVNWFERLPEYR--AREFFLAGESYAGHFVPQACS-I 148 (253)
Q Consensus 103 ~~~~~a~~~~~fL~~f~~~fp~~~--~~~~~i~GESYaG~YvP~la~-i 148 (253)
+...+.+++...+++..+++|... ...+.|+|+|-||-.+-..|. |
T Consensus 271 ~k~SaReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~Dl 319 (518)
T PLN02719 271 SKFSAREQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDV 319 (518)
T ss_pred cchhHHHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHHH
Confidence 456677889999999999998753 347999999999987766665 5
No 93
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=35.24 E-value=42 Score=30.45 Aligned_cols=58 Identities=16% Similarity=-0.062 Sum_probs=0.0
Q ss_pred ccCcCceeeec--cccccccCCccccccCChHHHHHHHHHHHHHHHHhCccccCCceEEEeeccCCCcccccc
Q 042137 76 NSVKYFIMCSS--WSLQQELDFPTRIHHLTMTRTAEDSYTLLVNWFERLPEYRAREFFLAGESYAGHFVPQAC 146 (253)
Q Consensus 76 ~~~anlLfiDq--fSy~~~~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~YvP~la 146 (253)
.+...++.+|. ++-+ .... .+.+..|+++.++|+.. =..+.+.|+|.|+||..+-.+|
T Consensus 97 ~~~~~Vi~~Dl~G~g~s---~~~~----~~~~~~a~dl~~ll~~l------~l~~~~~lvG~SmGG~vA~~~A 156 (343)
T PRK08775 97 PARFRLLAFDFIGADGS---LDVP----IDTADQADAIALLLDAL------GIARLHAFVGYSYGALVGLQFA 156 (343)
T ss_pred ccccEEEEEeCCCCCCC---CCCC----CCHHHHHHHHHHHHHHc------CCCcceEEEEECHHHHHHHHHH
No 94
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=34.10 E-value=60 Score=26.36 Aligned_cols=58 Identities=17% Similarity=0.172 Sum_probs=37.4
Q ss_pred CcCceeeec--cccccccCCccccccCChHHHHHHHHHHHHHHHHhCccccCCceEEEeeccCCCccccccc
Q 042137 78 VKYFIMCSS--WSLQQELDFPTRIHHLTMTRTAEDSYTLLVNWFERLPEYRAREFFLAGESYAGHFVPQACS 147 (253)
Q Consensus 78 ~anlLfiDq--fSy~~~~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~YvP~la~ 147 (253)
..+++.+|. +..+ .... .. .+.++.++++.++++.+ ...++++.|+|+||..+-.+|.
T Consensus 39 ~~~v~~~d~~G~G~s---~~~~-~~-~~~~~~~~~~~~~i~~~-------~~~~v~liG~S~Gg~~a~~~a~ 98 (251)
T TIGR02427 39 DFRVLRYDKRGHGLS---DAPE-GP-YSIEDLADDVLALLDHL-------GIERAVFCGLSLGGLIAQGLAA 98 (251)
T ss_pred ccEEEEecCCCCCCC---CCCC-CC-CCHHHHHHHHHHHHHHh-------CCCceEEEEeCchHHHHHHHHH
Confidence 468888888 4332 1111 11 36677777777766543 2347999999999987665554
No 95
>PLN02847 triacylglycerol lipase
Probab=33.73 E-value=39 Score=34.04 Aligned_cols=47 Identities=17% Similarity=0.241 Sum_probs=32.7
Q ss_pred cccCChHHHHHHHHHHH----HHHHHhCccccCCceEEEeeccCCCccccccc-c
Q 042137 99 IHHLTMTRTAEDSYTLL----VNWFERLPEYRAREFFLAGESYAGHFVPQACS-I 148 (253)
Q Consensus 99 ~~~~~~~~~a~~~~~fL----~~f~~~fp~~~~~~~~i~GESYaG~YvP~la~-i 148 (253)
+.+.+.-..|+.+...+ ++-+..+|.| ++.|+|+|.||--+..++. +
T Consensus 221 ~AH~Gml~AArwI~~~i~~~L~kal~~~PdY---kLVITGHSLGGGVAALLAilL 272 (633)
T PLN02847 221 YAHCGMVAAARWIAKLSTPCLLKALDEYPDF---KIKIVGHSLGGGTAALLTYIL 272 (633)
T ss_pred ccCccHHHHHHHHHHHHHHHHHHHHHHCCCC---eEEEeccChHHHHHHHHHHHH
Confidence 34456666666665544 4555668876 8999999999997766666 5
No 96
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=33.31 E-value=65 Score=27.12 Aligned_cols=36 Identities=17% Similarity=0.096 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHHHHHhCccccCCceEEEeeccCCCcc
Q 042137 105 TRTAEDSYTLLVNWFERLPEYRAREFFLAGESYAGHFV 142 (253)
Q Consensus 105 ~~~a~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~Yv 142 (253)
+..|.+|..|+..+=..+ =..-.+-+.|+|||..-+
T Consensus 88 ~~ga~~L~~f~~gl~a~~--~~~~~~tv~GHSYGS~v~ 123 (177)
T PF06259_consen 88 RAGAPRLARFLDGLRATH--GPDAHLTVVGHSYGSTVV 123 (177)
T ss_pred HHHHHHHHHHHHHhhhhc--CCCCCEEEEEecchhHHH
Confidence 344566666666654444 112368899999998755
No 97
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=33.08 E-value=40 Score=30.00 Aligned_cols=109 Identities=15% Similarity=0.209 Sum_probs=62.8
Q ss_pred CChHHHHHHHHHHHHHHHHhCccccCCceEEEeeccCCCccccccc-c--C---c-----------------cc----cH
Q 042137 102 LTMTRTAEDSYTLLVNWFERLPEYRAREFFLAGESYAGHFVPQACS-I--D---P-----------------SI----QQ 154 (253)
Q Consensus 102 ~~~~~~a~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~YvP~la~-i--N---~-----------------~I----~~ 154 (253)
++.++.|..+...|+. -+..+|+-++|+|+||.-.=-+|. + . | .| ..
T Consensus 54 ~di~~Lad~la~el~~------~~~d~P~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i~~~~D~ 127 (244)
T COG3208 54 TDIESLADELANELLP------PLLDAPFALFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQIHHLDDA 127 (244)
T ss_pred ccHHHHHHHHHHHhcc------ccCCCCeeecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCccCCCHH
Confidence 3555666655544432 356789999999999986555555 4 1 1 11 22
Q ss_pred HHHhhhCCCCCCcCChhhhhhccCCCCChHHHHHH---HHHc---------CCeEEEEecCCccccCchhHHHHHHH
Q 042137 155 DFQSNFHQFKRPSCDISVSDTLKDSPLTVLPIIQE---LMRC---------GIRVYICSGDSDGRVPTTSKRHSINK 219 (253)
Q Consensus 155 ~V~~aL~~~~w~~cs~~v~~~~~d~~~~~~~~l~~---LL~~---------girVLiY~Gd~D~i~n~~g~~~wi~~ 219 (253)
++.+.| .....|++.+.++ ...|.-.+|.+.. +++. ..+|.++.|+.|.+|...-..+|-+.
T Consensus 128 ~~l~~l--~~lgG~p~e~led-~El~~l~LPilRAD~~~~e~Y~~~~~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~ 201 (244)
T COG3208 128 DFLADL--VDLGGTPPELLED-PELMALFLPILRADFRALESYRYPPPAPLACPIHAFGGEKDHEVSRDELGAWREH 201 (244)
T ss_pred HHHHHH--HHhCCCChHHhcC-HHHHHHHHHHHHHHHHHhcccccCCCCCcCcceEEeccCcchhccHHHHHHHHHh
Confidence 222222 2344555544322 0123334454443 2221 46899999999999988877777653
No 98
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=31.26 E-value=49 Score=27.31 Aligned_cols=28 Identities=21% Similarity=0.131 Sum_probs=24.2
Q ss_pred CCeEEEEecCCccccCchhHHHHHHHhC
Q 042137 194 GIRVYICSGDSDGRVPTTSKRHSINKLG 221 (253)
Q Consensus 194 girVLiY~Gd~D~i~n~~g~~~wi~~l~ 221 (253)
..+||+.+|+.|.+||....+.+.+.+.
T Consensus 198 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~ 225 (257)
T TIGR03611 198 QHPVLLIANRDDMLVPYTQSLRLAAALP 225 (257)
T ss_pred CccEEEEecCcCcccCHHHHHHHHHhcC
Confidence 6899999999999999988887777653
No 99
>PRK06489 hypothetical protein; Provisional
Probab=31.24 E-value=65 Score=29.51 Aligned_cols=80 Identities=15% Similarity=0.120 Sum_probs=0.0
Q ss_pred ccCCeeeeCCCCccccCCCCc-----------------ccCcCceeeec--cccccccCCcccc------ccCChHHHHH
Q 042137 55 ELGPYPVNTDGKCLSHSKYAR-----------------NSVKYFIMCSS--WSLQQELDFPTRI------HHLTMTRTAE 109 (253)
Q Consensus 55 E~GP~~~~~~~~~l~~n~~sW-----------------~~~anlLfiDq--fSy~~~~~~~~~~------~~~~~~~~a~ 109 (253)
+.||-.|-..| .--+..+| .+...++.+|. +..+ ..+.+- . .+.++.++
T Consensus 67 ~~gpplvllHG--~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S---~~p~~~~~~~~~~-~~~~~~a~ 140 (360)
T PRK06489 67 EIDNAVLVLHG--TGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKS---SKPSDGLRAAFPR-YDYDDMVE 140 (360)
T ss_pred CCCCeEEEeCC--CCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCC---CCCCcCCCCCCCc-ccHHHHHH
Q ss_pred HHHHHHHHHHHhCccccCCceE-EEeeccCCCcccccc
Q 042137 110 DSYTLLVNWFERLPEYRAREFF-LAGESYAGHFVPQAC 146 (253)
Q Consensus 110 ~~~~fL~~f~~~fp~~~~~~~~-i~GESYaG~YvP~la 146 (253)
++..++..-+.. .++. |+|.|.||.-+-.+|
T Consensus 141 ~~~~~l~~~lgi------~~~~~lvG~SmGG~vAl~~A 172 (360)
T PRK06489 141 AQYRLVTEGLGV------KHLRLILGTSMGGMHAWMWG 172 (360)
T ss_pred HHHHHHHHhcCC------CceeEEEEECHHHHHHHHHH
No 100
>PF08060 NOSIC: NOSIC (NUC001) domain; InterPro: IPR012976 This is the central domain in Nop56/SIK1-like proteins [].; PDB: 3PLA_K 3ICX_B 3ID6_A 3ID5_E 3NVM_A 3NMU_B 2NNW_C 3NVI_A 3NVK_A 2OZB_E ....
Probab=31.07 E-value=49 Score=22.06 Aligned_cols=23 Identities=17% Similarity=0.446 Sum_probs=18.2
Q ss_pred hHHHHHHHHHHHHHHHH-hCcccc
Q 042137 104 MTRTAEDSYTLLVNWFE-RLPEYR 126 (253)
Q Consensus 104 ~~~~a~~~~~fL~~f~~-~fp~~~ 126 (253)
.+.....+..+++.||. +|||+.
T Consensus 12 id~ei~~~~~~lre~Y~~~FPEL~ 35 (53)
T PF08060_consen 12 IDKEINLLHMRLREWYSWHFPELE 35 (53)
T ss_dssp HHHHHHHHHHHHHHHHTTTSTTHH
T ss_pred HHHHHHHHHHHHHHHHHccchhHH
Confidence 44556778899999996 699985
No 101
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=30.77 E-value=1.2e+02 Score=22.20 Aligned_cols=39 Identities=21% Similarity=0.248 Sum_probs=30.0
Q ss_pred CCCChHHHHHHHHHcCCeEEEEecCCccccCchhHHHHHHHhCC
Q 042137 179 SPLTVLPIIQELMRCGIRVYICSGDSDGRVPTTSKRHSINKLGA 222 (253)
Q Consensus 179 ~~~~~~~~l~~LL~~girVLiY~Gd~D~i~n~~g~~~wi~~l~w 222 (253)
....+...++.|.++|+++.|.+|.. ....+.+++.+++
T Consensus 25 ~~~~~~~~l~~l~~~g~~i~ivS~~~-----~~~~~~~~~~~~~ 63 (139)
T cd01427 25 LYPGVKEALKELKEKGIKLALATNKS-----RREVLELLEELGL 63 (139)
T ss_pred cCcCHHHHHHHHHHCCCeEEEEeCch-----HHHHHHHHHHcCC
Confidence 34567888999999999999999876 4445667777765
No 102
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=30.33 E-value=42 Score=28.71 Aligned_cols=41 Identities=12% Similarity=0.141 Sum_probs=30.7
Q ss_pred ChHHHHHHHHHHHHHHHHhCccccCCceEEEeeccCCCcccc
Q 042137 103 TMTRTAEDSYTLLVNWFERLPEYRAREFFLAGESYAGHFVPQ 144 (253)
Q Consensus 103 ~~~~~a~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~YvP~ 144 (253)
+-+..++.+.+.|.+..+..+.- .+++-+.|+|.||.++=+
T Consensus 54 gI~~~g~rL~~eI~~~~~~~~~~-~~~IsfIgHSLGGli~r~ 94 (217)
T PF05057_consen 54 GIDVCGERLAEEILEHIKDYESK-IRKISFIGHSLGGLIARY 94 (217)
T ss_pred hhHHHHHHHHHHHHHhccccccc-cccceEEEecccHHHHHH
Confidence 45566777877777777665543 468999999999998743
No 103
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=30.04 E-value=49 Score=29.48 Aligned_cols=125 Identities=21% Similarity=0.225 Sum_probs=61.6
Q ss_pred ChHHHHHHHHHHHHHHHHhCccccCCceEEEeeccCCCccccccc-c-C-ccccHHHHhhhC-CCCCCcC---Chhh-hh
Q 042137 103 TMTRTAEDSYTLLVNWFERLPEYRAREFFLAGESYAGHFVPQACS-I-D-PSIQQDFQSNFH-QFKRPSC---DISV-SD 174 (253)
Q Consensus 103 ~~~~~a~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~YvP~la~-i-N-~~I~~~V~~aL~-~~~w~~c---s~~v-~~ 174 (253)
+....|+-+...|+..-+ +|.=+.+-++|+|.||.-+-.... - + +. .|.|++..- ...|..- +... ..
T Consensus 81 ~~~~qa~wl~~vl~~L~~---~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~-~P~l~K~V~Ia~pfng~~~~~~~~~~~ 156 (255)
T PF06028_consen 81 NYKKQAKWLKKVLKYLKK---KYHFKKFNLVGHSMGGLSWTYYLENYGNDKN-LPKLNKLVTIAGPFNGILGMNDDQNQN 156 (255)
T ss_dssp HHHHHHHHHHHHHHHHHH---CC--SEEEEEEETHHHHHHHHHHHHCTTGTT-S-EEEEEEEES--TTTTTCCSC-TTTT
T ss_pred CHHHHHHHHHHHHHHHHH---hcCCCEEeEEEECccHHHHHHHHHHhccCCC-CcccceEEEeccccCccccccccchhh
Confidence 455566666666666544 444568999999999974422211 1 1 11 233333221 1112111 1000 00
Q ss_pred hc-cCCCCChHHHHHHHHHc-------CCeEEEEecC------CccccCchhHHHHHHHhCCCCccceeecc
Q 042137 175 TL-KDSPLTVLPIIQELMRC-------GIRVYICSGD------SDGRVPTTSKRHSINKLGALVNTTWYPWH 232 (253)
Q Consensus 175 ~~-~d~~~~~~~~l~~LL~~-------girVLiY~Gd------~D~i~n~~g~~~wi~~l~w~~~~~~~~w~ 232 (253)
.+ .+-.....+.+..|++. +++||-..|+ .|.+||..+.+ .++.|==+....++...
T Consensus 157 ~~~~~gp~~~~~~y~~l~~~~~~~~p~~i~VLnI~G~~~~g~~sDG~V~~~Ss~-sl~~L~~~~~~~Y~e~~ 227 (255)
T PF06028_consen 157 DLNKNGPKSMTPMYQDLLKNRRKNFPKNIQVLNIYGDLEDGSNSDGIVPNASSL-SLRYLLKNRAKSYQEKT 227 (255)
T ss_dssp -CSTT-BSS--HHHHHHHHTHGGGSTTT-EEEEEEEESBTTCSBTSSSBHHHHC-THHHHCTTTSSEEEEEE
T ss_pred hhcccCCcccCHHHHHHHHHHHhhCCCCeEEEEEecccCCCCCCCeEEeHHHHH-HHHHHhhcccCceEEEE
Confidence 11 12234455666666643 6899999999 78999988774 34444333334444433
No 104
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=29.89 E-value=46 Score=28.99 Aligned_cols=34 Identities=18% Similarity=0.405 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHhCccccCCceEEEeeccCCCccccccc
Q 042137 110 DSYTLLVNWFERLPEYRAREFFLAGESYAGHFVPQACS 147 (253)
Q Consensus 110 ~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~YvP~la~ 147 (253)
...+++++..+.++. +++++|+|=||.-+-+.|.
T Consensus 70 ~A~~yl~~~~~~~~~----~i~v~GHSkGGnLA~yaa~ 103 (224)
T PF11187_consen 70 SALAYLKKIAKKYPG----KIYVTGHSKGGNLAQYAAA 103 (224)
T ss_pred HHHHHHHHHHHhCCC----CEEEEEechhhHHHHHHHH
Confidence 445666777766665 6999999999997766554
No 105
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=29.84 E-value=26 Score=32.42 Aligned_cols=37 Identities=22% Similarity=0.368 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHhCccccCCceEEEeeccCCCccccccc-c
Q 042137 109 EDSYTLLVNWFERLPEYRAREFFLAGESYAGHFVPQACS-I 148 (253)
Q Consensus 109 ~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~YvP~la~-i 148 (253)
..+.+-++.....+|+| .++++|+|-||..+...|. |
T Consensus 155 ~~~~~~~~~L~~~~~~~---~i~vTGHSLGgAlA~laa~~i 192 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNY---SIWVTGHSLGGALASLAALDL 192 (336)
T ss_pred HHHHHHHHHHHHhcCCc---EEEEecCChHHHHHHHHHHHH
Confidence 34555555666777744 9999999999999999888 7
No 106
>PRK10749 lysophospholipase L2; Provisional
Probab=29.38 E-value=49 Score=29.90 Aligned_cols=100 Identities=8% Similarity=0.014 Sum_probs=52.3
Q ss_pred CceEEEEEEEeCCCCCCcceecccCCeeeeCCCCccccCCCC--c-ccCcCceeeec--cccccccC--CccccccCChH
Q 042137 33 GRALFYYFVESANSSTEPLSLAELGPYPVNTDGKCLSHSKYA--R-NSVKYFIMCSS--WSLQQELD--FPTRIHHLTMT 105 (253)
Q Consensus 33 ~~~lFywf~es~~p~~~Plil~E~GP~~~~~~~~~l~~n~~s--W-~~~anlLfiDq--fSy~~~~~--~~~~~~~~~~~ 105 (253)
+..++|+.+.... .+|+||.=+|=.. ..-...+.. + .+-.+++-+|. +..+.... ...+.. .+.+
T Consensus 40 g~~l~~~~~~~~~--~~~~vll~HG~~~-----~~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~-~~~~ 111 (330)
T PRK10749 40 DIPIRFVRFRAPH--HDRVVVICPGRIE-----SYVKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHV-ERFN 111 (330)
T ss_pred CCEEEEEEccCCC--CCcEEEEECCccc-----hHHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCcc-ccHH
Confidence 5678888876542 2344543444210 000011100 1 12358888998 33221000 001111 2566
Q ss_pred HHHHHHHHHHHHHHHhCccccCCceEEEeeccCCCccc
Q 042137 106 RTAEDSYTLLVNWFERLPEYRAREFFLAGESYAGHFVP 143 (253)
Q Consensus 106 ~~a~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~YvP 143 (253)
..++++..+++.....++ ..++++.|+|.||.-+-
T Consensus 112 ~~~~d~~~~~~~~~~~~~---~~~~~l~GhSmGG~ia~ 146 (330)
T PRK10749 112 DYVDDLAAFWQQEIQPGP---YRKRYALAHSMGGAILT 146 (330)
T ss_pred HHHHHHHHHHHHHHhcCC---CCCeEEEEEcHHHHHHH
Confidence 777788777776554333 46899999999998653
No 107
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=29.19 E-value=46 Score=31.87 Aligned_cols=31 Identities=26% Similarity=0.427 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHhCccccCCceEEEeeccCCCcc
Q 042137 109 EDSYTLLVNWFERLPEYRAREFFLAGESYAGHFV 142 (253)
Q Consensus 109 ~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~Yv 142 (253)
+|+-++++---++||+ +++|.+|.|+||..+
T Consensus 182 ~Dl~~~v~~i~~~~P~---a~l~avG~S~Gg~iL 212 (409)
T KOG1838|consen 182 EDLREVVNHIKKRYPQ---APLFAVGFSMGGNIL 212 (409)
T ss_pred HHHHHHHHHHHHhCCC---CceEEEEecchHHHH
Confidence 4555555555577884 599999999999864
No 108
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=28.47 E-value=1.2e+02 Score=26.68 Aligned_cols=57 Identities=14% Similarity=0.040 Sum_probs=36.1
Q ss_pred cCceeeeccccccccCCccccccCChHHHHHHHHHHHHHHHHhCccccCCceEEEeeccCCCcc
Q 042137 79 KYFIMCSSWSLQQELDFPTRIHHLTMTRTAEDSYTLLVNWFERLPEYRAREFFLAGESYAGHFV 142 (253)
Q Consensus 79 anlLfiDqfSy~~~~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~Yv 142 (253)
.+++-+|.--++ .+.... .+.+....|+.++++.+-+..|.+ .++.+.|.|.||..+
T Consensus 58 ~~v~~~Dl~G~G---~S~~~~--~~~~~~~~d~~~~~~~l~~~~~g~--~~i~l~G~S~Gg~~a 114 (274)
T TIGR03100 58 FPVLRFDYRGMG---DSEGEN--LGFEGIDADIAAAIDAFREAAPHL--RRIVAWGLCDAASAA 114 (274)
T ss_pred CEEEEeCCCCCC---CCCCCC--CCHHHHHHHHHHHHHHHHhhCCCC--CcEEEEEECHHHHHH
Confidence 578888873333 212111 244556677777777665555543 359999999999754
No 109
>COG4425 Predicted membrane protein [Function unknown]
Probab=28.30 E-value=77 Score=31.02 Aligned_cols=38 Identities=18% Similarity=0.376 Sum_probs=31.8
Q ss_pred ChHHHHHHHHHHHHHHHHhCccccCCceEEEeeccCCC
Q 042137 103 TMTRTAEDSYTLLVNWFERLPEYRAREFFLAGESYAGH 140 (253)
Q Consensus 103 ~~~~~a~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~ 140 (253)
.-.++|+.+.+++-......|+=+.-++|+.|||-|..
T Consensus 372 yg~~aa~aLf~aVy~yw~qLP~~sRPKLylhG~SLGa~ 409 (588)
T COG4425 372 YGADAARALFEAVYGYWTQLPKSSRPKLYLHGESLGAM 409 (588)
T ss_pred cchhHHHHHHHHHHHHHHhCCcCCCCceEEeccccccc
Confidence 34568899999999999999988777899999998654
No 110
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=28.03 E-value=83 Score=27.20 Aligned_cols=38 Identities=26% Similarity=0.241 Sum_probs=26.1
Q ss_pred ChHHHHHHHHHHHHHHHHhC--ccccCCceEEEeeccCCC
Q 042137 103 TMTRTAEDSYTLLVNWFERL--PEYRAREFFLAGESYAGH 140 (253)
Q Consensus 103 ~~~~~a~~~~~fL~~f~~~f--p~~~~~~~~i~GESYaG~ 140 (253)
...+.++.+.++++...+.+ ..-..+++.|.|+|.||.
T Consensus 58 ~l~~q~~~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGl 97 (225)
T PF07819_consen 58 TLQRQAEFLAEAIKYILELYKSNRPPPRSVILVGHSMGGL 97 (225)
T ss_pred cHHHHHHHHHHHHHHHHHhhhhccCCCCceEEEEEchhhH
Confidence 34455666666666666655 223467899999999997
No 111
>PLN02802 triacylglycerol lipase
Probab=27.90 E-value=56 Score=32.19 Aligned_cols=42 Identities=10% Similarity=0.094 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHHHhCccccCCceEEEeeccCCCccccccc-c
Q 042137 106 RTAEDSYTLLVNWFERLPEYRAREFFLAGESYAGHFVPQACS-I 148 (253)
Q Consensus 106 ~~a~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~YvP~la~-i 148 (253)
.+.+++.+-++.+.+++|.. ...++|+|+|-||-.+-..|. |
T Consensus 309 S~reqVl~eV~~Ll~~Y~~e-~~sI~VTGHSLGGALAtLaA~dL 351 (509)
T PLN02802 309 SLSESVVGEVRRLMEKYKGE-ELSITVTGHSLGAALALLVADEL 351 (509)
T ss_pred hHHHHHHHHHHHHHHhCCCC-cceEEEeccchHHHHHHHHHHHH
Confidence 56678888888888887743 237999999999987766655 5
No 112
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=27.76 E-value=60 Score=27.34 Aligned_cols=28 Identities=25% Similarity=0.275 Sum_probs=22.7
Q ss_pred CCeEEEEecCCccccCchhHHHHHHHhC
Q 042137 194 GIRVYICSGDSDGRVPTTSKRHSINKLG 221 (253)
Q Consensus 194 girVLiY~Gd~D~i~n~~g~~~wi~~l~ 221 (253)
+.+|++.+|+.|.++|....+...+.|.
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~ 182 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLK 182 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHH
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHH
Confidence 5899999999999999998888777764
No 113
>PRK11460 putative hydrolase; Provisional
Probab=27.53 E-value=63 Score=27.78 Aligned_cols=29 Identities=10% Similarity=0.099 Sum_probs=25.6
Q ss_pred cCCeEEEEecCCccccCchhHHHHHHHhC
Q 042137 193 CGIRVYICSGDSDGRVPTTSKRHSINKLG 221 (253)
Q Consensus 193 ~girVLiY~Gd~D~i~n~~g~~~wi~~l~ 221 (253)
.+.+|++.+|+.|.++|....++..+.|.
T Consensus 147 ~~~pvli~hG~~D~vvp~~~~~~~~~~L~ 175 (232)
T PRK11460 147 TATTIHLIHGGEDPVIDVAHAVAAQEALI 175 (232)
T ss_pred CCCcEEEEecCCCCccCHHHHHHHHHHHH
Confidence 36899999999999999999988887775
No 114
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=27.27 E-value=87 Score=30.83 Aligned_cols=41 Identities=15% Similarity=0.216 Sum_probs=34.3
Q ss_pred CChHHHHHHHHHHHHHHHHhCccccCCceEEEeeccCCCcc
Q 042137 102 LTMTRTAEDSYTLLVNWFERLPEYRAREFFLAGESYAGHFV 142 (253)
Q Consensus 102 ~~~~~~a~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~Yv 142 (253)
-+..++=.|+.+|++..=.+|+.-...++..+|-||.|...
T Consensus 146 LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLs 186 (514)
T KOG2182|consen 146 LSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLS 186 (514)
T ss_pred hhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHH
Confidence 47788889999998888888887666799999999998753
No 115
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=26.41 E-value=82 Score=27.41 Aligned_cols=97 Identities=13% Similarity=0.139 Sum_probs=49.6
Q ss_pred hHHHHHHHHHHHHHHHHhCccc-cCCceEEEeeccCCCccccccc-c-CccccHHHHhhhCCCCCCcCChhhhhhccCCC
Q 042137 104 MTRTAEDSYTLLVNWFERLPEY-RAREFFLAGESYAGHFVPQACS-I-DPSIQQDFQSNFHQFKRPSCDISVSDTLKDSP 180 (253)
Q Consensus 104 ~~~~a~~~~~fL~~f~~~fp~~-~~~~~~i~GESYaG~YvP~la~-i-N~~I~~~V~~aL~~~~w~~cs~~v~~~~~d~~ 180 (253)
+.+.|......|.+|+...-+. ....++|.++|.|+.-+-..-. + .....+++...|+. --.+.. |..
T Consensus 68 d~~~a~~s~~~l~~~L~~L~~~~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~--viL~Ap-------Did 138 (233)
T PF05990_consen 68 DRESARFSGPALARFLRDLARAPGIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDN--VILAAP-------DID 138 (233)
T ss_pred hhhhHHHHHHHHHHHHHHHHhccCCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhhe--EEEECC-------CCC
Confidence 4444555555555555543333 4668999999998874422111 1 00000111122210 011111 332
Q ss_pred CCh-HHHHHHHHHcCCeEEEEecCCccccC
Q 042137 181 LTV-LPIIQELMRCGIRVYICSGDSDGRVP 209 (253)
Q Consensus 181 ~~~-~~~l~~LL~~girVLiY~Gd~D~i~n 209 (253)
.+. ...++.+.+..-||.||.-..|.+..
T Consensus 139 ~d~f~~~~~~~~~~~~~itvy~s~~D~AL~ 168 (233)
T PF05990_consen 139 NDVFRSQLPDLGSSARRITVYYSRNDRALK 168 (233)
T ss_pred HHHHHHHHHHHhhcCCCEEEEEcCCchHHH
Confidence 222 23455666667899999999998764
No 116
>PLN02761 lipase class 3 family protein
Probab=26.39 E-value=76 Score=31.44 Aligned_cols=45 Identities=9% Similarity=0.029 Sum_probs=34.4
Q ss_pred ChHHHHHHHHHHHHHHHHhCccc-c--CCceEEEeeccCCCccccccc
Q 042137 103 TMTRTAEDSYTLLVNWFERLPEY-R--AREFFLAGESYAGHFVPQACS 147 (253)
Q Consensus 103 ~~~~~a~~~~~fL~~f~~~fp~~-~--~~~~~i~GESYaG~YvP~la~ 147 (253)
+...+.+++...++...+.+|.. + ...++++|+|-||-.+-..|.
T Consensus 266 ~k~SaR~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 266 SSFSAREQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred cchhHHHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 55667889999999999888643 2 236999999999987655554
No 117
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=25.73 E-value=1.2e+02 Score=27.61 Aligned_cols=36 Identities=11% Similarity=0.430 Sum_probs=27.1
Q ss_pred CChHHHHHHHHHHHHHHHHhCccccCCceEEEeeccCCCcc
Q 042137 102 LTMTRTAEDSYTLLVNWFERLPEYRAREFFLAGESYAGHFV 142 (253)
Q Consensus 102 ~~~~~~a~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~Yv 142 (253)
.+.++..+.=.+|++++.- +.+.+||.|+|-|.-.+
T Consensus 89 fsL~~QV~HKlaFik~~~P-----k~~ki~iiGHSiGaYm~ 124 (301)
T KOG3975|consen 89 FSLQDQVDHKLAFIKEYVP-----KDRKIYIIGHSIGAYMV 124 (301)
T ss_pred cchhhHHHHHHHHHHHhCC-----CCCEEEEEecchhHHHH
Confidence 4666777777788887753 57899999999876544
No 118
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=25.48 E-value=45 Score=27.86 Aligned_cols=41 Identities=22% Similarity=0.308 Sum_probs=30.3
Q ss_pred CChHHHHHHHHHHHHHHHHhCccccCCceEEEeeccCCCccccccc-c
Q 042137 102 LTMTRTAEDSYTLLVNWFERLPEYRAREFFLAGESYAGHFVPQACS-I 148 (253)
Q Consensus 102 ~~~~~~a~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~YvP~la~-i 148 (253)
.+-++.|+...+.++. ..|+ .|++|+|.|+||.-+=.+|. +
T Consensus 46 ~si~~la~~y~~~I~~---~~~~---gp~~L~G~S~Gg~lA~E~A~~L 87 (229)
T PF00975_consen 46 DSIEELASRYAEAIRA---RQPE---GPYVLAGWSFGGILAFEMARQL 87 (229)
T ss_dssp SSHHHHHHHHHHHHHH---HTSS---SSEEEEEETHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhh---hCCC---CCeeehccCccHHHHHHHHHHH
Confidence 4777777777666643 2332 39999999999998877887 6
No 119
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=25.48 E-value=93 Score=28.21 Aligned_cols=44 Identities=16% Similarity=0.246 Sum_probs=35.4
Q ss_pred CCCChHHHHHHHHHcCCeEEEEecCCccccCchhHHHHHHHhCCCC
Q 042137 179 SPLTVLPIIQELMRCGIRVYICSGDSDGRVPTTSKRHSINKLGALV 224 (253)
Q Consensus 179 ~~~~~~~~l~~LL~~girVLiY~Gd~D~i~n~~g~~~wi~~l~w~~ 224 (253)
-...++..+..+.+.|++|.+.+|-.+.. -..|++||++.+.++
T Consensus 146 Alp~al~ly~~l~~~G~kIf~VSgR~e~~--r~aT~~NL~kaGy~~ 189 (275)
T TIGR01680 146 ALPETLKNYNKLVSLGFKIIFLSGRLKDK--QAVTEANLKKAGYHT 189 (275)
T ss_pred CChHHHHHHHHHHHCCCEEEEEeCCchhH--HHHHHHHHHHcCCCC
Confidence 35578889999999999999999997654 355899998887653
No 120
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=25.06 E-value=69 Score=30.24 Aligned_cols=28 Identities=11% Similarity=0.175 Sum_probs=25.6
Q ss_pred CCeEEEEecCCccccCchhHHHHHHHhC
Q 042137 194 GIRVYICSGDSDGRVPTTSKRHSINKLG 221 (253)
Q Consensus 194 girVLiY~Gd~D~i~n~~g~~~wi~~l~ 221 (253)
.++|||.+|+.|.+||...++.+.+++.
T Consensus 324 ~vPvLIi~G~~D~vvp~~~a~~l~~~~~ 351 (395)
T PLN02652 324 TVPFMVLHGTADRVTDPLASQDLYNEAA 351 (395)
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHhcC
Confidence 6999999999999999999999988764
No 121
>PLN03037 lipase class 3 family protein; Provisional
Probab=24.77 E-value=67 Score=31.80 Aligned_cols=43 Identities=9% Similarity=0.112 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHHHHhCccc-cCCceEEEeeccCCCccccccc
Q 042137 105 TRTAEDSYTLLVNWFERLPEY-RAREFFLAGESYAGHFVPQACS 147 (253)
Q Consensus 105 ~~~a~~~~~fL~~f~~~fp~~-~~~~~~i~GESYaG~YvP~la~ 147 (253)
..+.+++.+.+++..+.+++. ....++|+|+|.||--+-..|.
T Consensus 294 ~SareQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~ 337 (525)
T PLN03037 294 LSASEQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAY 337 (525)
T ss_pred chhHHHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHH
Confidence 445567888888888888753 2347999999999987655554
No 122
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=24.30 E-value=1.1e+02 Score=26.82 Aligned_cols=44 Identities=16% Similarity=0.261 Sum_probs=34.9
Q ss_pred CCCChHHHHHHHHHcCCeEEEEecCCccccCchhHHHHHHHhCCCC
Q 042137 179 SPLTVLPIIQELMRCGIRVYICSGDSDGRVPTTSKRHSINKLGALV 224 (253)
Q Consensus 179 ~~~~~~~~l~~LL~~girVLiY~Gd~D~i~n~~g~~~wi~~l~w~~ 224 (253)
-...++..+..|.++|++|.+.+|-.... -..|.+||++.+.++
T Consensus 121 aip~al~l~~~l~~~G~~Vf~lTGR~e~~--r~~T~~nL~~~G~~~ 164 (229)
T TIGR01675 121 ALPEGLKLYQKIIELGIKIFLLSGRWEEL--RNATLDNLINAGFTG 164 (229)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEcCCChHH--HHHHHHHHHHcCCCC
Confidence 34567788999999999999999986533 356889999987765
No 123
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=23.99 E-value=93 Score=30.04 Aligned_cols=37 Identities=14% Similarity=0.135 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHHHHhCccccCCceEEEeeccCCCcccc
Q 042137 105 TRTAEDSYTLLVNWFERLPEYRAREFFLAGESYAGHFVPQ 144 (253)
Q Consensus 105 ~~~a~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~YvP~ 144 (253)
++..+++.+.+...++..+ .+++.|.|+|.||..+=.
T Consensus 142 ~~~~~~Lk~lIe~~~~~~g---~~kV~LVGHSMGGlva~~ 178 (440)
T PLN02733 142 PETMDGLKKKLETVYKASG---GKKVNIISHSMGGLLVKC 178 (440)
T ss_pred HHHHHHHHHHHHHHHHHcC---CCCEEEEEECHhHHHHHH
Confidence 4456677777777776544 569999999999976543
No 124
>PLN02310 triacylglycerol lipase
Probab=23.69 E-value=72 Score=30.55 Aligned_cols=45 Identities=9% Similarity=0.049 Sum_probs=32.0
Q ss_pred ChHHHHHHHHHHHHHHHHhCccc-cCCceEEEeeccCCCccccccc
Q 042137 103 TMTRTAEDSYTLLVNWFERLPEY-RAREFFLAGESYAGHFVPQACS 147 (253)
Q Consensus 103 ~~~~~a~~~~~fL~~f~~~fp~~-~~~~~~i~GESYaG~YvP~la~ 147 (253)
+...+..++.+.+++..+.+++- ....+.|+|+|-||--+-..|.
T Consensus 183 ~~~sa~~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~ 228 (405)
T PLN02310 183 NKLSASEQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAY 228 (405)
T ss_pred ccchHHHHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHH
Confidence 34456677888888888777632 2347999999999987655554
No 125
>PRK04940 hypothetical protein; Provisional
Probab=23.40 E-value=1.6e+02 Score=25.00 Aligned_cols=75 Identities=7% Similarity=0.154 Sum_probs=43.1
Q ss_pred CceEEEeeccCCCccccccc-c-------CccccHH--HHhhhC-CCCCCcCChhhhhhccCCCCChHHHHHHHHHcCCe
Q 042137 128 REFFLAGESYAGHFVPQACS-I-------DPSIQQD--FQSNFH-QFKRPSCDISVSDTLKDSPLTVLPIIQELMRCGIR 196 (253)
Q Consensus 128 ~~~~i~GESYaG~YvP~la~-i-------N~~I~~~--V~~aL~-~~~w~~cs~~v~~~~~d~~~~~~~~l~~LL~~gir 196 (253)
.++.|.|-|-||.|+-.+|. - ||.++|. .++.++ ..++. .+. ..-+..++ +++-=|
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g~~aVLiNPAv~P~~~L~~~ig~~~~y~----~~~-------~~h~~eL~--~~~p~r 126 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCGIRQVIFNPNLFPEENMEGKIDRPEEYA----DIA-------TKCVTNFR--EKNRDR 126 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHCCCEEEECCCCChHHHHHHHhCCCcchh----hhh-------HHHHHHhh--hcCccc
Confidence 47899999999999999887 3 7766553 345555 22222 111 11111111 233356
Q ss_pred EEEEecCCccccCchhHHH
Q 042137 197 VYICSGDSDGRVPTTSKRH 215 (253)
Q Consensus 197 VLiY~Gd~D~i~n~~g~~~ 215 (253)
++++-..-|-+.++.-+.+
T Consensus 127 ~~vllq~gDEvLDyr~a~~ 145 (180)
T PRK04940 127 CLVILSRNDEVLDSQRTAE 145 (180)
T ss_pred EEEEEeCCCcccCHHHHHH
Confidence 6677666676766654443
No 126
>PLN02511 hydrolase
Probab=23.39 E-value=84 Score=29.36 Aligned_cols=57 Identities=14% Similarity=0.123 Sum_probs=35.7
Q ss_pred cCcCceeeec--cccccccCCccccccCChHHHHHHHHHHHHHHHHhCccccCCceEEEeeccCCCc
Q 042137 77 SVKYFIMCSS--WSLQQELDFPTRIHHLTMTRTAEDSYTLLVNWFERLPEYRAREFFLAGESYAGHF 141 (253)
Q Consensus 77 ~~anlLfiDq--fSy~~~~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~Y 141 (253)
+-.+++-+|. +.-+.. ..+. + .....++|+.++++..-.++| ..+++++|.|.||.-
T Consensus 128 ~g~~vv~~d~rG~G~s~~-~~~~-~---~~~~~~~Dl~~~i~~l~~~~~---~~~~~lvG~SlGg~i 186 (388)
T PLN02511 128 KGWRVVVFNSRGCADSPV-TTPQ-F---YSASFTGDLRQVVDHVAGRYP---SANLYAAGWSLGANI 186 (388)
T ss_pred CCCEEEEEecCCCCCCCC-CCcC-E---EcCCchHHHHHHHHHHHHHCC---CCCEEEEEechhHHH
Confidence 3457888888 543310 1111 1 223446677777776666666 458999999999954
No 127
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=23.36 E-value=1.1e+02 Score=24.73 Aligned_cols=52 Identities=12% Similarity=-0.038 Sum_probs=30.6
Q ss_pred CcCceeeec--cccccccCCccccccCChHHHHHHHHHHHHHHHHhCccccCCceEEEeeccCCCcccccc
Q 042137 78 VKYFIMCSS--WSLQQELDFPTRIHHLTMTRTAEDSYTLLVNWFERLPEYRAREFFLAGESYAGHFVPQAC 146 (253)
Q Consensus 78 ~anlLfiDq--fSy~~~~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~YvP~la 146 (253)
..+++.+|. +-.+ ..... .+.++.++++.+.+ ..++++.|+|+||..+..+|
T Consensus 30 ~~~vi~~d~~G~G~s---~~~~~---~~~~~~~~~~~~~~-----------~~~~~lvG~S~Gg~~a~~~a 83 (245)
T TIGR01738 30 HFTLHLVDLPGHGRS---RGFGP---LSLADAAEAIAAQA-----------PDPAIWLGWSLGGLVALHIA 83 (245)
T ss_pred CeEEEEecCCcCccC---CCCCC---cCHHHHHHHHHHhC-----------CCCeEEEEEcHHHHHHHHHH
Confidence 467888888 4333 21111 24445555443321 25899999999998765444
No 128
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=22.78 E-value=2.1e+02 Score=22.63 Aligned_cols=44 Identities=11% Similarity=0.076 Sum_probs=31.0
Q ss_pred ChHHHHHHHHHcCCeEEEEecCCccccC----------chhHHHHHHHhCCCCc
Q 042137 182 TVLPIIQELMRCGIRVYICSGDSDGRVP----------TTSKRHSINKLGALVN 225 (253)
Q Consensus 182 ~~~~~l~~LL~~girVLiY~Gd~D~i~n----------~~g~~~wi~~l~w~~~ 225 (253)
.++..+..+-++|++|++.+|-.-..+. ..-|.+|+.+-+.+.-
T Consensus 28 ~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i~~~~~~~t~~wL~k~~ipYd 81 (126)
T TIGR01689 28 AVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKINIHTLPIIILWLNQHNVPYD 81 (126)
T ss_pred HHHHHHHHHHHCCCEEEEECCCCchhhhccccccchhhHHHHHHHHHHcCCCCc
Confidence 3455666666889999999998755433 2467899988665543
No 129
>PLN02872 triacylglycerol lipase
Probab=22.50 E-value=84 Score=29.75 Aligned_cols=28 Identities=21% Similarity=0.463 Sum_probs=25.5
Q ss_pred CCeEEEEecCCccccCchhHHHHHHHhC
Q 042137 194 GIRVYICSGDSDGRVPTTSKRHSINKLG 221 (253)
Q Consensus 194 girVLiY~Gd~D~i~n~~g~~~wi~~l~ 221 (253)
.++|+|+.|+.|.+++....++..++|.
T Consensus 325 ~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp 352 (395)
T PLN02872 325 SLPLWMGYGGTDGLADVTDVEHTLAELP 352 (395)
T ss_pred CccEEEEEcCCCCCCCHHHHHHHHHHCC
Confidence 4799999999999999999999998885
No 130
>PF05414 DUF1717: Viral domain of unknown function (DUF1717); InterPro: IPR008745 The domain is found towards the N terminus of the polyprotein of Apple stem grooving virus (strain P-209) (ASGV), Citrus tatter leaf virus and from Apple stem grooving virus (strain Korea) (ASGV) (Pear black necrotic leaf spot virus). Its function is unknown [, ].
Probab=22.40 E-value=56 Score=24.36 Aligned_cols=12 Identities=58% Similarity=0.706 Sum_probs=10.6
Q ss_pred cCCeEEEEecCC
Q 042137 193 CGIRVYICSGDS 204 (253)
Q Consensus 193 ~girVLiY~Gd~ 204 (253)
-|+||+||-||.
T Consensus 39 lgyrVhiyyGdS 50 (101)
T PF05414_consen 39 LGYRVHIYYGDS 50 (101)
T ss_pred cccEEEEEecce
Confidence 389999999986
No 131
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=21.68 E-value=1.5e+02 Score=25.78 Aligned_cols=43 Identities=14% Similarity=0.245 Sum_probs=36.4
Q ss_pred CCChHHHHHHHHHcCCeEEEEecCCccccCchhHHHHHHHhCCCC
Q 042137 180 PLTVLPIIQELMRCGIRVYICSGDSDGRVPTTSKRHSINKLGALV 224 (253)
Q Consensus 180 ~~~~~~~l~~LL~~girVLiY~Gd~D~i~n~~g~~~wi~~l~w~~ 224 (253)
...++.++..+.++|++|.+.+|-.+. .-..|+++|++.+.+.
T Consensus 117 ip~a~~l~~~~~~~G~~V~~iT~R~~~--~r~~T~~nL~~~G~~~ 159 (229)
T PF03767_consen 117 IPGALELYNYARSRGVKVFFITGRPES--QREATEKNLKKAGFPG 159 (229)
T ss_dssp ETTHHHHHHHHHHTTEEEEEEEEEETT--CHHHHHHHHHHHTTST
T ss_pred cHHHHHHHHHHHHCCCeEEEEecCCch--hHHHHHHHHHHcCCCc
Confidence 456889999999999999999998877 5578899999988654
No 132
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=21.29 E-value=94 Score=26.22 Aligned_cols=28 Identities=18% Similarity=0.421 Sum_probs=23.7
Q ss_pred CCeEEEEecCCccccCchhHHHHHHHhC
Q 042137 194 GIRVYICSGDSDGRVPTTSKRHSINKLG 221 (253)
Q Consensus 194 girVLiY~Gd~D~i~n~~g~~~wi~~l~ 221 (253)
.++||+..|+.|.++|....+.+.+.+.
T Consensus 220 ~~P~lii~g~~D~~vp~~~~~~~~~~~~ 247 (278)
T TIGR03056 220 TIPLHLIAGEEDKAVPPDESKRAATRVP 247 (278)
T ss_pred CCCEEEEEeCCCcccCHHHHHHHHHhcc
Confidence 5799999999999999888777766553
No 133
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=21.27 E-value=1e+02 Score=29.94 Aligned_cols=62 Identities=19% Similarity=0.262 Sum_probs=37.1
Q ss_pred CcCceeeec--cc----ccccc--C-CccccccCChHHHHHHHHHHHHHHHHhCccccCCceEEEeeccCCCcc
Q 042137 78 VKYFIMCSS--WS----LQQEL--D-FPTRIHHLTMTRTAEDSYTLLVNWFERLPEYRAREFFLAGESYAGHFV 142 (253)
Q Consensus 78 ~anlLfiDq--fS----y~~~~--~-~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~Yv 142 (253)
.|-|+|+|. |- |++.. + ..-+| .+.+++=.|+..+| .++++-+-=+..|+..+|-||||+-.
T Consensus 111 ~AllVFaEHRyYGeS~PFG~~s~k~~~hlgy--LtseQALADfA~ll-~~lK~~~~a~~~pvIafGGSYGGMLa 181 (492)
T KOG2183|consen 111 KALLVFAEHRYYGESLPFGSQSYKDARHLGY--LTSEQALADFAELL-TFLKRDLSAEASPVIAFGGSYGGMLA 181 (492)
T ss_pred CceEEEeehhccccCCCCcchhccChhhhcc--ccHHHHHHHHHHHH-HHHhhccccccCcEEEecCchhhHHH
Confidence 478899998 21 11000 0 11134 36666666665544 55555544456799999999999753
No 134
>PLN00021 chlorophyllase
Probab=20.65 E-value=61 Score=29.60 Aligned_cols=40 Identities=23% Similarity=0.204 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHHh-Cc---cccCCceEEEeeccCCCcccccc
Q 042137 107 TAEDSYTLLVNWFER-LP---EYRAREFFLAGESYAGHFVPQAC 146 (253)
Q Consensus 107 ~a~~~~~fL~~f~~~-fp---~~~~~~~~i~GESYaG~YvP~la 146 (253)
.+.++..++.+-.+. .| +....+++|+|+|.||.-+=.+|
T Consensus 101 d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA 144 (313)
T PLN00021 101 DAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALA 144 (313)
T ss_pred HHHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHH
Confidence 355556666554332 22 23346799999999998665555
No 135
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=20.65 E-value=1.6e+02 Score=23.23 Aligned_cols=29 Identities=31% Similarity=0.467 Sum_probs=22.1
Q ss_pred HcCCeEEEEecCCccccCchhHHHHHHHh
Q 042137 192 RCGIRVYICSGDSDGRVPTTSKRHSINKL 220 (253)
Q Consensus 192 ~~girVLiY~Gd~D~i~n~~g~~~wi~~l 220 (253)
+-..+|++..|+.|.+++..-.+.+.+.+
T Consensus 174 ~~~~pvl~i~g~~D~~~~~~~~~~~~~~~ 202 (228)
T PF12697_consen 174 RIKVPVLVIHGEDDPIVPPESAEELADKL 202 (228)
T ss_dssp GSSSEEEEEEETTSSSSHHHHHHHHHHHS
T ss_pred ccCCCeEEeecCCCCCCCHHHHHHHHHHC
Confidence 34799999999999999955555555554
No 136
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=20.54 E-value=1e+02 Score=27.71 Aligned_cols=36 Identities=8% Similarity=0.071 Sum_probs=26.4
Q ss_pred HHHHHHHHHc-CCeEEEEecCCccccCchhHHHHHHH
Q 042137 184 LPIIQELMRC-GIRVYICSGDSDGRVPTTSKRHSINK 219 (253)
Q Consensus 184 ~~~l~~LL~~-girVLiY~Gd~D~i~n~~g~~~wi~~ 219 (253)
...+.++.++ .++|....-+.|.-||....+..+.-
T Consensus 205 ~~~~~q~yaaVrtPi~~~~~~DD~w~P~As~d~f~~~ 241 (281)
T COG4757 205 MRNYRQVYAAVRTPITFSRALDDPWAPPASRDAFASF 241 (281)
T ss_pred HhHHHHHHHHhcCceeeeccCCCCcCCHHHHHHHHHh
Confidence 3344455543 58888889999999999998887653
No 137
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=20.13 E-value=1.2e+02 Score=28.51 Aligned_cols=30 Identities=30% Similarity=0.419 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHhCccccCCceEEEeeccCCCc
Q 042137 109 EDSYTLLVNWFERLPEYRAREFFLAGESYAGHF 141 (253)
Q Consensus 109 ~~~~~fL~~f~~~fp~~~~~~~~i~GESYaG~Y 141 (253)
+|+..||...-+++| .+++|++|-|.||..
T Consensus 132 ~D~~~~l~~l~~~~~---~r~~~avG~SLGgnm 161 (345)
T COG0429 132 EDIRFFLDWLKARFP---PRPLYAVGFSLGGNM 161 (345)
T ss_pred hHHHHHHHHHHHhCC---CCceEEEEecccHHH
Confidence 666666666656666 679999999999953
No 138
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=20.01 E-value=1.3e+02 Score=31.56 Aligned_cols=71 Identities=15% Similarity=0.247 Sum_probs=43.5
Q ss_pred cccCCeeeeCCCCccccCCCCcccCcCceeeec---cccccccCCccccccCChHHHHHHHHHHHHH---HHHhCcccc-
Q 042137 54 AELGPYPVNTDGKCLSHSKYARNSVKYFIMCSS---WSLQQELDFPTRIHHLTMTRTAEDSYTLLVN---WFERLPEYR- 126 (253)
Q Consensus 54 ~E~GP~~~~~~~~~l~~n~~sW~~~anlLfiDq---fSy~~~~~~~~~~~~~~~~~~a~~~~~fL~~---f~~~fp~~~- 126 (253)
.-+||++=..+ ..||++. ...-+|- ||.- . . .+..+.++.+.++++. .|+.-+||+
T Consensus 116 y~~~~~e~t~~----~d~~~~~----DFFaVDFnEe~tAm---~-----G-~~l~dQtEYV~dAIk~ILslYr~~~e~~~ 178 (973)
T KOG3724|consen 116 YQGGPFEKTED----RDNPFSF----DFFAVDFNEEFTAM---H-----G-HILLDQTEYVNDAIKYILSLYRGEREYAS 178 (973)
T ss_pred hcCCchhhhhc----ccCcccc----ceEEEcccchhhhh---c-----c-HhHHHHHHHHHHHHHHHHHHhhcccccCC
Confidence 56788873322 3566665 2233443 4422 1 1 2667777777777664 444456676
Q ss_pred --CCceEEEeeccCCCc
Q 042137 127 --AREFFLAGESYAGHF 141 (253)
Q Consensus 127 --~~~~~i~GESYaG~Y 141 (253)
+..+.|.|+|+||.-
T Consensus 179 p~P~sVILVGHSMGGiV 195 (973)
T KOG3724|consen 179 PLPHSVILVGHSMGGIV 195 (973)
T ss_pred CCCceEEEEeccchhHH
Confidence 566999999999974
Done!