BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042142
(376 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 94/350 (26%), Positives = 170/350 (48%), Gaps = 28/350 (8%)
Query: 35 PPSPMALPIIGHLHLLAPIPHQALHKLSIRYGPLIHLFLGSVPCIVACSPETAKEILKTH 94
PP P P+IGH+ L PH AL ++S +YG ++ + +GS P +V +T ++ L
Sbjct: 13 PPGPWGWPLIGHMLTLGKNPHLALSRMSQQYGDVLQIRIGSTPVVVLSGLDTIRQALVRQ 72
Query: 95 ETSFCDRPISATVDYLTYGSADFSFAP-YGPYWKFMKKLCMTQL----LGGQTLNQFIPI 149
F RP T ++ G + SF+P GP W ++L L + +
Sbjct: 73 GDDFKGRPDLYTFTLISNGQS-MSFSPDSGPVWAARRRLAQNGLKSFSIASDPASSTSCY 131
Query: 150 RSEEIRRFMQLMLKKAKASEA----VDVGKELIRLTNNVVSRMTMGQICSNNDKEADEVR 205
E + + ++++ + A + + ++ NV+ + G+ +N +E +
Sbjct: 132 LEEHVSKEAEVLISTLQELMAGPGHFNPYRYVVVSVTNVICAICFGRRYDHNHQELLSLV 191
Query: 206 KLVQETAELTGKFNLQDYI---WFCKNIDLQGFGKRLKEVRRKFDNMMERIIKEHQEARK 262
L E+ G N D+I + N L F K++ KF + M++++KEH + +
Sbjct: 192 NLNNNFGEVVGSGNPADFIPILRYLPNPSLNAF----KDLNEKFYSFMQKMVKEHYKTFE 247
Query: 263 INKERGKDYAPMDLLDMLLDISE----DESSEIKLTRENIKAFILDIFAAGTDTSAITVE 318
R D+ D L++ + DE++ ++L+ E I +LD+F AG DT +
Sbjct: 248 KGHIR-------DITDSLIEHCQEKQLDENANVQLSDEKIINIVLDLFGAGFDTVTTAIS 300
Query: 319 WALAELINHPDMMKKAREEIDSVVGKSRLVEESDIINLPYLQALVKETLR 368
W+L L+ +P + +K +EE+D+V+G+SR SD +LPY++A + ET R
Sbjct: 301 WSLMYLVMNPRVQRKIQEELDTVIGRSRRPRLSDRSHLPYMEAFILETFR 350
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 165/373 (44%), Gaps = 40/373 (10%)
Query: 28 SKITSSL--PPSPMALPIIGHLHLLAPIPHQALHKLSIRYGPLIHLFLGSVPCIVACSPE 85
+K TSS PP P A P+IG+ + H + +L+ RYG + + LGS P +V
Sbjct: 2 AKKTSSKGKPPGPFAWPLIGNAAAVGQAAHLSFARLARRYGDVFQIRLGSCPIVVLNGER 61
Query: 86 TAKEILKTHETSFCDRPISATVDYLTYGSADFSFAPYGPYWKFMKKLCMT---------- 135
+ L ++F DRP A+ ++ G +F Y +WK ++ +
Sbjct: 62 AIHQALVQQGSAFADRPSFASFRVVS-GGRSMAFGHYSEHWKVQRRAAHSMMRNFFTRQP 120
Query: 136 ---QLLGGQTLNQFIPIRSEEIRRFMQLMLKKAKASEAVDVGKELIRLTNNVVSRMTMGQ 192
Q+L G L+ E R + L+++ + +D + NV+S + G
Sbjct: 121 RSRQVLEGHVLS--------EARELVALLVRGSADGAFLDPRPLTVVAVANVMSAVCFGC 172
Query: 193 ICSNNDKEADEVRKLVQETAELTGKFNLQD---YIWFCKNIDLQGFGKRLKEVRRKFDNM 249
S++D E E+ +E G +L D ++ + N F + +++ R F N
Sbjct: 173 RYSHDDPEFRELLSHNEEFGRTVGAGSLVDVMPWLQYFPNPVRTVF-REFEQLNRNFSNF 231
Query: 250 MERIIKEHQEARKINKERGKDYAPMDLLDMLLDISEDESSE------IKLTRENIKAFIL 303
+ H E+ + AP D++D + +E +++ +L EN+ A I
Sbjct: 232 ILDKFLRHCESLRPGA------APRDMMDAFILSAEKKAAGDSHGGGARLDLENVPATIT 285
Query: 304 DIFAAGTDTSAITVEWALAELINHPDMMKKAREEIDSVVGKSRLVEESDIINLPYLQALV 363
DIF A DT + ++W L +PD+ + + E+D VVG+ RL D NLPY+ A +
Sbjct: 286 DIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDRLPCMGDQPNLPYVLAFL 345
Query: 364 KETLRLHPTGPMS 376
E +R P++
Sbjct: 346 YEAMRFSSFVPVT 358
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 167/362 (46%), Gaps = 29/362 (8%)
Query: 29 KITSSLPPSPMALPIIGHLHLLAPIPH--QALHKLSIRYGPLIHLFLGSVPCIVACSPET 86
K + P S ++LP++G L L H KL +YGP+ + +G+ ++ +
Sbjct: 4 KTGAKYPKSLLSLPLVGSLPFLPRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQL 63
Query: 87 AKEILKTHETSFCDRPISATVDYLTYGSADFSFAPYGPYWKFMKKLCMTQLL----GGQT 142
AKE+L F RP AT+D + +FA G +W+ ++L M G Q
Sbjct: 64 AKEVLIKKGKDFSGRPQMATLDIASNNRKGIAFADSGAHWQLHRRLAMATFALFKDGDQK 123
Query: 143 LNQFIPIRSEEIRRFMQLMLKKAKASEAVDVGKELIRLTNNVVSRMTMGQICSNNDKEAD 202
L + I +EI ++ +++D+ + NV+S + N D E +
Sbjct: 124 LEKII---CQEISTLCDML--ATHNGQSIDISFPVFVAVTNVISLICFNTSYKNGDPELN 178
Query: 203 EVRKLVQETAELTGKFNLQDYIWFCKNIDLQGFGKRLKEVRRKFDNMMERIIKEHQEARK 262
++ + + K +L D + + K + K V+ + D ++ +I++ +
Sbjct: 179 VIQNYNEGIIDNLSKDSLVDLVPWLKIFPNKTLEKLKSHVKIRND-LLNKILENY----- 232
Query: 263 INKERGKDYAPMDLLDMLL---------DISEDESSEIKLTRENIKAFILDIFAAGTDTS 313
KE+ + + ++LD L+ + D+ SE+ L+ +I I DIF AG +T+
Sbjct: 233 --KEKFRSDSITNMLDTLMQAKMNSDNGNAGPDQDSEL-LSDNHILTTIGDIFGAGVETT 289
Query: 314 AITVEWALAELINHPDMMKKAREEIDSVVGKSRLVEESDIINLPYLQALVKETLRLHPTG 373
V+W LA L+++P + KK EEID VG SR SD L L+A ++E LRL P
Sbjct: 290 TSVVKWTLAFLLHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVLRLRPVA 349
Query: 374 PM 375
PM
Sbjct: 350 PM 351
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 150/357 (42%), Gaps = 44/357 (12%)
Query: 35 PPSPMALPIIGHLHLLAPIPHQALHKLSIRYGPLIHLFLGSVPCIVACSPETAKEILKTH 94
PP P P++GH+ L PH AL ++S RYG ++ + +GS P +V +T ++ L
Sbjct: 18 PPEPWGWPLLGHVLTLGKNPHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVRQ 77
Query: 95 ETSFCDRPISATVDYLTYGSADFSFAPYGPYWKFMKKLCMTQLLGGQTLNQFI----PIR 150
F RP T +T G + GP W ++L LN F P
Sbjct: 78 GDDFKGRPDLYTSTLITDGQSLTFSTDSGPVWAARRRLAQN------ALNTFSIASDPAS 131
Query: 151 SEE--------------IRRFMQLMLKKAKASEAVDVGKELIRLTNNVVSRMTMGQICSN 196
S I R +LM D +++ NV+ M GQ
Sbjct: 132 SSSCYLEEHVSKEAKALISRLQELMAGPGH----FDPYNQVVVSVANVIGAMCFGQHFPE 187
Query: 197 NDKEADEVRKLVQETAELTGKFNLQDY---IWFCKNIDLQGFGKRLKEVRRKFDNMMERI 253
+ E + K E E N D+ + + N LQ R K ++F +++
Sbjct: 188 SSDEMLSLVKNTHEFVETASSGNPLDFFPILRYLPNPALQ----RFKAFNQRFLWFLQKT 243
Query: 254 IKEHQEARKINKERGKDYAPMDLLDMLLDISED--ESSEIKLTRENIKAFILDIFAAGTD 311
++EH + N R D+ L S+ +S + +E I + DIF AG D
Sbjct: 244 VQEHYQDFDKNSVR-------DITGALFKHSKKGPRASGNLIPQEKIVNLVNDIFGAGFD 296
Query: 312 TSAITVEWALAELINHPDMMKKAREEIDSVVGKSRLVEESDIINLPYLQALVKETLR 368
T + W+L L+ P++ +K ++E+D+V+G+ R SD LPYL+A + ET R
Sbjct: 297 TVTTAISWSLMYLVTKPEIQRKIQKELDTVIGRERRPRLSDRPQLPYLEAFILETFR 353
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/358 (27%), Positives = 166/358 (46%), Gaps = 21/358 (5%)
Query: 28 SKITSS---LPPSPMALPIIG-HLHLLAPIPHQALHKLSIRYGPLIHLFLGSVPCIVACS 83
+K TSS LPP P LP IG +L L + +L K+S RYGP+ + LG +V C
Sbjct: 2 AKKTSSKGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCG 61
Query: 84 PETAKEILKTHETSFCDRPISATVDYL--TYGSADFSFAPYGPYWKFMKKLCMTQLLGGQ 141
+ KE L F R AT D+L YG A FS G K +++ + L G
Sbjct: 62 HDAVKEALVDQAEEFSGRGEQATFDWLFKGYGVA-FS---NGERAKQLRRFSIATLRGFG 117
Query: 142 TLNQFIPIRSEEIRRFMQLMLKKAKASEAVDVGKELIRLTNNVVSRMTMGQICSNNDKEA 201
+ I R +E F+ L+ + +D L R +NV+S + G DKE
Sbjct: 118 VGKRGIEERIQEEAGFLIDALRGTHGAN-IDPTFFLSRTVSNVISSIVFGDRFDYEDKEF 176
Query: 202 DEVRKLVQETAELTGKFNLQDYIWFCKNID-LQGFGKRLKEVRRKFDNMMERIIKEHQEA 260
+ +++ + + T Q Y F + L G ++ + + ++ + + ++ +Q
Sbjct: 177 LSLLRMMLGSFQFTATSTGQLYEMFSSVMKHLPGPQQQAFKELQGLEDFIAKKVEHNQRT 236
Query: 261 RKINKERGKDYAPMDLLD-MLLDISEDESS-EIKLTRENIKAFILDIFAAGTDTSAITVE 318
N +P D +D L+ + E+E + + +N+ L++F AGT+T + T+
Sbjct: 237 LDPN-------SPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFFAGTETVSTTLR 289
Query: 319 WALAELINHPDMMKKAREEIDSVVGKSRLVEESDIINLPYLQALVKETLRLHPTGPMS 376
+ L+ HP++ K EEID V+GK+R + D +PY +A++ E R PM
Sbjct: 290 YGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYTEAVIHEIQRFGDMLPMG 347
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 157/342 (45%), Gaps = 22/342 (6%)
Query: 43 IIGHLHLLAPIPHQALHKLSIRYGPLIHLFLGSVPCIVACSPETAKEILKTHETSFCDRP 102
+ G LHLL P L L+ + GP+ L LG +V S T +E + F RP
Sbjct: 34 VPGFLHLLQPNLPIHLLSLTQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAGRP 93
Query: 103 ISATVDYLTYGSADFSFAPYGPYWKFMKKLCMTQLLGGQTLNQFIPIRSEEIRRFMQLML 162
+ ++ D S Y WK KKL + LL G T + P + + F + M
Sbjct: 94 QIPSYKLVSQRCQDISLGDYSLLWKAHKKLTRSALLLG-TRSSMEPWVDQLTQEFCERM- 151
Query: 163 KKAKASEAVDVGKELIRLTNNVVSRMTMGQICSNNDKEADEVRKLVQETAELTGKFNLQ- 221
+ +A V + KE LT +++ +T G + D VQ+ + +++Q
Sbjct: 152 -RVQAGAPVTIQKEFSLLTCSIICYLTFG---NKEDTLVHAFHDCVQDLMKTWDHWSIQI 207
Query: 222 -DYIWFCKNIDLQGFGKRLKEVRRKFDNMMERIIKEHQEARKINKERGKDYAPMDLLD-M 279
D + F + G RLK+ D+M+E+ ++ H+E+ + R D+ D M
Sbjct: 208 LDMVPFLRFFPNPGLW-RLKQAIENRDHMVEKQLRRHKESMVAGQWR-------DMTDYM 259
Query: 280 LLDISED--ESSEIKLTRENIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREE 337
L + E +L ++ ++D+F GT+T+A T+ WA+A L++HP++ ++ +EE
Sbjct: 260 LQGVGRQRVEEGPGQLLEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEE 319
Query: 338 IDSVVGKS---RLVEESDIINLPYLQALVKETLRLHPTGPMS 376
+D +G V D LP L A + E LRL P P++
Sbjct: 320 LDRELGPGASCSRVTYKDRARLPLLNATIAEVLRLRPVVPLA 361
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 165/357 (46%), Gaps = 19/357 (5%)
Query: 28 SKITSS---LPPSPMALPIIG-HLHLLAPIPHQALHKLSIRYGPLIHLFLGSVPCIVACS 83
+K TSS LPP P LP IG +L L + +L K+S RYGP+ + LG +V C
Sbjct: 2 AKKTSSKGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCG 61
Query: 84 PETAKEILKTHETSFCDRPISATVDYLTYG-SADFSFAPYGPYWKFMKKLCMTQLLGGQT 142
+ +E L F R AT D++ G FS G K +++ + L
Sbjct: 62 HDAVREALVDQAEEFSGRGEQATFDWVFKGYGVVFS---NGERAKQLRRFSIATLRDFGV 118
Query: 143 LNQFIPIRSEEIRRFMQLMLKKAKASEAVDVGKELIRLTNNVVSRMTMGQICSNNDKEAD 202
+ I R +E F+ L+ + +D L R +NV+S + G DKE
Sbjct: 119 GKRGIEERIQEEAGFLIDALRGTGGAN-IDPTFFLSRTVSNVISSIVFGDRFDYKDKEFL 177
Query: 203 EVRKLVQETAELTGKFNLQDYIWFCKNID-LQGFGKRLKEVRRKFDNMMERIIKEHQEAR 261
+ +++ + + T Q Y F + L G ++ ++ + ++ + + ++ +Q
Sbjct: 178 SLLRMMLGSFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVEHNQRTL 237
Query: 262 KINKERGKDYAPMDLLD-MLLDISEDESS-EIKLTRENIKAFILDIFAAGTDTSAITVEW 319
N +P D +D L+ + E+E + + +N+ L++F AGT+T + T+ +
Sbjct: 238 DPN-------SPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFFAGTETVSTTLRY 290
Query: 320 ALAELINHPDMMKKAREEIDSVVGKSRLVEESDIINLPYLQALVKETLRLHPTGPMS 376
L+ HP++ K EEID V+GK+R + D +PY++A++ E R PM
Sbjct: 291 GFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMG 347
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 164/357 (45%), Gaps = 19/357 (5%)
Query: 28 SKITSS---LPPSPMALPIIG-HLHLLAPIPHQALHKLSIRYGPLIHLFLGSVPCIVACS 83
+K TSS LPP P LP IG +L L + +L K+S RYGP+ + LG +V C
Sbjct: 2 AKKTSSKGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCG 61
Query: 84 PETAKEILKTHETSFCDRPISATVDYLTYG-SADFSFAPYGPYWKFMKKLCMTQLLGGQT 142
+ +E L F R AT D++ G FS G K +++ + L
Sbjct: 62 HDAVREALVDQAEEFSGRGEQATFDWVFKGYGVVFS---NGERAKQLRRFSIATLRDFGV 118
Query: 143 LNQFIPIRSEEIRRFMQLMLKKAKASEAVDVGKELIRLTNNVVSRMTMGQICSNNDKEAD 202
+ I R +E F+ L+ + +D L R +NV+S + G DKE
Sbjct: 119 GKRGIEERIQEEAGFLIDALRGTGGAN-IDPTFFLSRTVSNVISSIVFGDRFDYKDKEFL 177
Query: 203 EVRKLVQETAELTGKFNLQDYIWFCKNID-LQGFGKRLKEVRRKFDNMMERIIKEHQEAR 261
+ +++ + T Q Y F + L G ++ ++ + ++ + + ++ +Q
Sbjct: 178 SLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVEHNQRTL 237
Query: 262 KINKERGKDYAPMDLLD-MLLDISEDESS-EIKLTRENIKAFILDIFAAGTDTSAITVEW 319
N +P D +D L+ + E+E + + +N+ L++F GT+T + T+ +
Sbjct: 238 DPN-------SPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFIGGTETVSTTLRY 290
Query: 320 ALAELINHPDMMKKAREEIDSVVGKSRLVEESDIINLPYLQALVKETLRLHPTGPMS 376
L+ HP++ K EEID V+GK+R + D +PY++A++ E R PMS
Sbjct: 291 GFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMS 347
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 163/357 (45%), Gaps = 19/357 (5%)
Query: 28 SKITSS---LPPSPMALPIIG-HLHLLAPIPHQALHKLSIRYGPLIHLFLGSVPCIVACS 83
+K TSS LPP P LP IG +L L + +L K+S RYGP+ + LG +V C
Sbjct: 2 AKKTSSKGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCG 61
Query: 84 PETAKEILKTHETSFCDRPISATVDYLTYG-SADFSFAPYGPYWKFMKKLCMTQLLGGQT 142
+ +E L F R AT D++ G FS G K +++ + L
Sbjct: 62 HDAVREALVDQAEEFSGRGEQATFDWVFKGYGVVFS---NGERAKQLRRFSIATLRDFGV 118
Query: 143 LNQFIPIRSEEIRRFMQLMLKKAKASEAVDVGKELIRLTNNVVSRMTMGQICSNNDKEAD 202
+ I R +E F+ L+ + +D L R +NV+S + G DKE
Sbjct: 119 GKRGIEERIQEEAGFLIDALRGTGGAN-IDPTFFLSRTVSNVISSIVFGDRFDYKDKEFL 177
Query: 203 EVRKLVQETAELTGKFNLQDYIWFCKNID-LQGFGKRLKEVRRKFDNMMERIIKEHQEAR 261
+ +++ + T Q Y F + L G ++ ++ + ++ + + ++ +Q
Sbjct: 178 SLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVEHNQRTL 237
Query: 262 KINKERGKDYAPMDLLD-MLLDISEDESS-EIKLTRENIKAFILDIFAAGTDTSAITVEW 319
N +P D +D L+ + E+E + + +N+ L +F GT+T + T+ +
Sbjct: 238 DPN-------SPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLQLFVGGTETVSTTLRY 290
Query: 320 ALAELINHPDMMKKAREEIDSVVGKSRLVEESDIINLPYLQALVKETLRLHPTGPMS 376
L+ HP++ K EEID V+GK+R + D +PY++A++ E R PMS
Sbjct: 291 GFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMS 347
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 163/357 (45%), Gaps = 19/357 (5%)
Query: 28 SKITSS---LPPSPMALPIIG-HLHLLAPIPHQALHKLSIRYGPLIHLFLGSVPCIVACS 83
+K TSS LPP P LP IG +L L + +L K+S RYGP+ + LG +V C
Sbjct: 2 AKKTSSKGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCG 61
Query: 84 PETAKEILKTHETSFCDRPISATVDYLTYG-SADFSFAPYGPYWKFMKKLCMTQLLGGQT 142
+ +E L F R AT D++ G FS G K +++ + L
Sbjct: 62 HDAVREALVDQAEEFSGRGEQATFDWVFKGYGVVFS---NGERAKQLRRFSIATLRDFGV 118
Query: 143 LNQFIPIRSEEIRRFMQLMLKKAKASEAVDVGKELIRLTNNVVSRMTMGQICSNNDKEAD 202
+ I R +E F+ L+ + +D L R +NV+S + G DKE
Sbjct: 119 GKRGIEERIQEEAGFLIDALRGTGGAN-IDPTFFLSRTVSNVISSIVFGDRFDYKDKEFL 177
Query: 203 EVRKLVQETAELTGKFNLQDYIWFCKNID-LQGFGKRLKEVRRKFDNMMERIIKEHQEAR 261
+ +++ + T Q Y F + L G ++ ++ + ++ + + ++ +Q
Sbjct: 178 SLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVEHNQRTL 237
Query: 262 KINKERGKDYAPMDLLD-MLLDISEDESS-EIKLTRENIKAFILDIFAAGTDTSAITVEW 319
N +P D +D L+ + E+E + + +N+ L +F GT+T + T+ +
Sbjct: 238 DPN-------SPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLQLFIGGTETVSTTLRY 290
Query: 320 ALAELINHPDMMKKAREEIDSVVGKSRLVEESDIINLPYLQALVKETLRLHPTGPMS 376
L+ HP++ K EEID V+GK+R + D +PY++A++ E R PMS
Sbjct: 291 GFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMS 347
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 162/357 (45%), Gaps = 19/357 (5%)
Query: 28 SKITSS---LPPSPMALPIIG-HLHLLAPIPHQALHKLSIRYGPLIHLFLGSVPCIVACS 83
+K TSS LPP P LP IG +L L + +L K+S RYGP+ + LG +V C
Sbjct: 2 AKKTSSKGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCG 61
Query: 84 PETAKEILKTHETSFCDRPISATVDYLTYG-SADFSFAPYGPYWKFMKKLCMTQLLGGQT 142
+ +E L F R AT D++ G FS G K +++ + L
Sbjct: 62 HDAVREALVDQAEEFSGRGEQATFDWVFKGYGVVFS---NGERAKQLRRFSIATLRDFGV 118
Query: 143 LNQFIPIRSEEIRRFMQLMLKKAKASEAVDVGKELIRLTNNVVSRMTMGQICSNNDKEAD 202
+ I R +E F+ L+ + +D L R +NV+S + G DKE
Sbjct: 119 GKRGIEERIQEEAGFLIDALRGTGGAN-IDPTFFLSRTVSNVISSIVFGDRFDYKDKEFL 177
Query: 203 EVRKLVQETAELTGKFNLQDYIWFCKNID-LQGFGKRLKEVRRKFDNMMERIIKEHQEAR 261
+ +++ + T Q Y F + L G ++ + + ++ + + ++ +Q
Sbjct: 178 SLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQCLQGLEDFIAKKVEHNQRTL 237
Query: 262 KINKERGKDYAPMDLLD-MLLDISEDESS-EIKLTRENIKAFILDIFAAGTDTSAITVEW 319
N +P D +D L+ + E+E + + +N+ L +F GT+T + T+ +
Sbjct: 238 DPN-------SPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLQLFIGGTETVSTTLRY 290
Query: 320 ALAELINHPDMMKKAREEIDSVVGKSRLVEESDIINLPYLQALVKETLRLHPTGPMS 376
L+ HP++ K EEID V+GK+R + D +PY++A++ E R PMS
Sbjct: 291 GFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMS 347
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 96/347 (27%), Positives = 158/347 (45%), Gaps = 15/347 (4%)
Query: 26 RRSKITSSLPPSPMALPIIGH-LHLLAPIPHQALHKLSIRYGPLIHLFLGSVPCIVACSP 84
+++ LPP P PIIG+ L + A ++L K S YGP+ ++LG P +V
Sbjct: 3 KKTSSKGKLPPGPTPFPIIGNILQIDAKDISKSLTKFSECYGPVFTVYLGMKPTVVLHGY 62
Query: 85 ETAKEILKTHETSFCDRPISATVDYLTYG-SADFSFAPYGPYWKFMKKLCMTQLLGGQTL 143
E KE L F R ++ ++ G FS A WK M++ + L
Sbjct: 63 EAVKEALVDLGEEFAGRGSVPILEKVSKGLGIAFSNA---KTWKEMRRFSLMTLRNFGMG 119
Query: 144 NQFIPIRSEEIRRFMQLMLKKAKASEAVDVGKELIRLTNNVVSRMTMGQICSNNDKEADE 203
+ I R +E R + L+K AS D L NV+ + D+E +
Sbjct: 120 KRSIEDRIQEEARCLVEELRKTNAS-PCDPTFILGCAPCNVICSVIFHNRFDYKDEEFLK 178
Query: 204 VRKLVQETAELTGKFNLQDYIWFCKNID-LQGFGKRLKEVRRKFDNMMERIIKEHQEARK 262
+ + + E EL G LQ Y F +D G K L + N + +KEHQ+
Sbjct: 179 LMESLHENVELLGTPWLQVYNNFPALLDYFPGIHKTLLKNADYIKNFIMEKVKEHQKLLD 238
Query: 263 INKERGKDYAPMDLLDMLLDISEDESSEIKLTRENIKAFILDIFAAGTDTSAITVEWALA 322
+N P D +D L I ++ + ++ T E++ + D+F AGT+T++ T+ ++L
Sbjct: 239 VNN-------PRDFIDCFL-IKMEQENNLEFTLESLVIAVSDLFGAGTETTSTTLRYSLL 290
Query: 323 ELINHPDMMKKAREEIDSVVGKSRLVEESDIINLPYLQALVKETLRL 369
L+ HP++ + +EEI+ V+G+ R D +PY A++ E R
Sbjct: 291 LLLKHPEVAARVQEEIERVIGRHRSPCMQDRSRMPYTDAVIHEIQRF 337
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 102/351 (29%), Positives = 163/351 (46%), Gaps = 22/351 (6%)
Query: 28 SKITSS---LPPSPMALPIIGHLHL--LAPIPHQALHKLSIRYGPLIHLFLGSVPCIVAC 82
+K TSS LPP P LPIIG+L L IP ++ +L+ R+GP+ L++GS +V
Sbjct: 2 AKKTSSKGKLPPGPFPLPIIGNLFQLELKNIP-KSFTRLAQRFGPVFTLYVGSQRMVVMH 60
Query: 83 SPETAKEILKTHETSFCDRPISATVDYLTYGSADFSFAPYGPYWKFMKKLCMTQLLGGQT 142
+ KE L ++ F R + + F GP WK +++ +T L
Sbjct: 61 GYKAVKEALLDYKDEFSGR--GDLPAFHAHRDRGIIFN-NGPTWKDIRRFSLTTLRNYGM 117
Query: 143 LNQFIPIRSEEIRRFMQLMLKKAKASEAVDVGKELIRLTNNVVSRMTMGQICSNNDKEAD 202
Q R + F+ L+K + + D + NV++ + + ND++
Sbjct: 118 GKQGNESRIQREAHFLLEALRKTQG-QPFDPTFLIGCAPCNVIADILFRKHFDYNDEKFL 176
Query: 203 EVRKLVQETAELTGKFNLQDYIWFCKNID-LQGFGKR-LKEVRRKFDNMMERIIKEHQEA 260
+ L E L LQ Y F + L G ++ +K V + + ER +KEH ++
Sbjct: 177 RLMYLFNENFHLLSTPWLQLYNNFPSFLHYLPGSHRKVIKNVAEVKEYVSER-VKEHHQS 235
Query: 261 RKINKERGKDYAPMDLLDMLLDISEDE--SSEIKLTRENIKAFILDIFAAGTDTSAITVE 318
N P DL D LL E E S+E T + I + D+F AGT+T++ T+
Sbjct: 236 LDPN-------CPRDLTDCLLVEMEKEKHSAERLYTMDGITVTVADLFFAGTETTSTTLR 288
Query: 319 WALAELINHPDMMKKAREEIDSVVGKSRLVEESDIINLPYLQALVKETLRL 369
+ L L+ +P++ +K EEID V+G SR+ D +PY+ A+V E R
Sbjct: 289 YGLLILMKYPEIEEKLHEEIDRVIGPSRIPAIKDRQEMPYMDAVVHEIQRF 339
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 104/361 (28%), Positives = 153/361 (42%), Gaps = 30/361 (8%)
Query: 28 SKITSS---LPPSPMALPIIGH-LHLLAPIPHQALHKLSIRYGPLIHLFLGSVPCIVACS 83
+K TSS LPP P LPIIG+ L + ++ S YGP+ ++ G P +V
Sbjct: 2 AKKTSSKGKLPPGPTPLPIIGNMLQIDVKDICKSFTNFSKVYGPVFTVYFGMNPIVVFHG 61
Query: 84 PETAKEILKTHETSFCDRPISATVDYLTYGSADFSFAPYGPYWKFMKKLCMTQLLGGQTL 143
E KE L + F R S +T G S G WK +++ +T L
Sbjct: 62 YEAVKEALIDNGEEFSGRGNSPISQRITKGLGIIS--SNGKRWKEIRRFSLTTLRNFGMG 119
Query: 144 NQFIPIRSEEIRRFMQLMLKKAKASEAVDVGKELIRLTNNVVSRMTMGQICSNNDKEADE 203
+ I R +E + L+K KAS D L NV+ + + D+
Sbjct: 120 KRSIEDRVQEEAHCLVEELRKTKAS-PCDPTFILGCAPCNVICSVVFQKRFDYKDQNFLT 178
Query: 204 VRKLVQETAELTGKFNLQDYIWFCKNIDL------QGFGKRLKEVRRKFDNMMERIIKEH 257
+ K E + +I C N L K LK V + E++ KEH
Sbjct: 179 LMKRFNENFRILN----SPWIQVCNNFPLLIDCFPGTHNKVLKNVALTRSYIREKV-KEH 233
Query: 258 QEARKINKERGKDYAPMDLLDMLLDISEDESSEIK--LTRENIKAFILDIFAAGTDTSAI 315
Q + +N P D +D L E E K EN+ + D+F AGT+T++
Sbjct: 234 QASLDVNN-------PRDFIDCFLIKMEQEKDNQKSEFNIENLVGTVADLFVAGTETTST 286
Query: 316 TVEWALAELINHPDMMKKAREEIDSVVGKSRLVEESDIINLPYLQALVKETLR---LHPT 372
T+ + L L+ HP++ K +EEID V+G+ R D ++PY A+V E R L PT
Sbjct: 287 TLRYGLLLLLKHPEVTAKVQEEIDHVIGRHRSPCMQDRSHMPYTDAVVHEIQRYSDLVPT 346
Query: 373 G 373
G
Sbjct: 347 G 347
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/349 (28%), Positives = 160/349 (45%), Gaps = 20/349 (5%)
Query: 28 SKITSS--LPPSPMALPIIGH-LHLLAPIPHQALHKLSIRYGPLIHLFLGSVPCIVACSP 84
+K TSS PP P LP+IG+ L + ++L LS YGP+ L+ G P +V
Sbjct: 2 AKKTSSKGRPPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGY 61
Query: 85 ETAKEILKTHETSFCDRPISATVDYLTYG-SADFSFAPYGPYWKFMKKLCMTQLLGGQTL 143
E KE L F R I + G FS G WK +++ + L
Sbjct: 62 EAVKEALIDLGEEFSGRGIFPLAERANRGFGIVFS---NGKKWKEIRRFSLMTLRNFGMG 118
Query: 144 NQFIPIRSEEIRRFMQLMLKKAKASEAVDVGKELIRLTNNVVSRMTMGQICSNNDKEADE 203
+ I R +E R + L+K KAS D L NV+ + + D++
Sbjct: 119 KRSIEDRVQEEARCLVEELRKTKAS-PCDPTFILGCAPCNVICSIIFHKRFDYKDQQFLN 177
Query: 204 VRKLVQETAELTGKFNLQDYIWFCKNIDL--QGFGKRLKEVRRKFDNMMERIIKEHQEAR 261
+ + + E E+ +Q Y F +D K LK V ++E++ KEHQE+
Sbjct: 178 LMEKLNENIEILSSPWIQVYNNFPALLDYFPGTHNKLLKNVAFMKSYILEKV-KEHQESM 236
Query: 262 KINKERGKDYAPMDLLDMLLDISEDE--SSEIKLTRENIKAFILDIFAAGTDTSAITVEW 319
+N P D +D L E E + + T E+++ +D+F AGT+T++ T+ +
Sbjct: 237 DMNN-------PQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRY 289
Query: 320 ALAELINHPDMMKKAREEIDSVVGKSRLVEESDIINLPYLQALVKETLR 368
AL L+ HP++ K +EEI+ V+G++R D ++PY A+V E R
Sbjct: 290 ALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYTDAVVHEVQR 338
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 161/355 (45%), Gaps = 30/355 (8%)
Query: 28 SKITSS----LPPSPMALPIIGH-LHLLAPIPHQALHKLSIRYGPLIHLFLGSVPCIVAC 82
+K TSS LPP P LP+IG+ L + ++L LS YGP+ L+ G P +V
Sbjct: 2 AKKTSSGRGKLPPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLH 61
Query: 83 SPETAKEILKTHETSFCDRPISATVDYLTYG-SADFSFAPYGPYWKFMKKLCMTQLLGGQ 141
E KE L F R I + G FS G WK +++ + L
Sbjct: 62 GYEAVKEALIDLGEEFSGRGIFPLAERANRGFGIVFS---NGKKWKEIRRFSLMTLRNFG 118
Query: 142 TLNQFIPIRSEEIRRFMQLMLKKAKASEAVDVGKELIRLTNNVVSRMTMGQICSNNDKEA 201
+ I R +E R + L+K KAS D L NV+ + + D++
Sbjct: 119 MGKRSIEDRVQEEARCLVEELRKTKAS-PCDPTFILGCAPCNVICSIIFHKRFDYKDQQF 177
Query: 202 DEVRKLVQETAELTGKFNLQDYIWFCKN----IDL--QGFGKRLKEVRRKFDNMMERIIK 255
+ + + E ++ +I C N ID K LK V ++E++ K
Sbjct: 178 LNLMEKLNENIKILS----SPWIQICNNFSPIIDYFPGTHNKLLKNVAFMKSYILEKV-K 232
Query: 256 EHQEARKINKERGKDYAPMDLLDMLLDISEDE--SSEIKLTRENIKAFILDIFAAGTDTS 313
EHQE+ +N P D +D L E E + + T E+++ +D+F AGT+T+
Sbjct: 233 EHQESMDMNN-------PQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETT 285
Query: 314 AITVEWALAELINHPDMMKKAREEIDSVVGKSRLVEESDIINLPYLQALVKETLR 368
+ T+ +AL L+ HP++ K +EEI+ V+G++R D ++PY A+V E R
Sbjct: 286 STTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYTDAVVHEVQR 340
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 139/330 (42%), Gaps = 29/330 (8%)
Query: 60 KLSIRYGPLIHLFLGSVPCIVACSPETAKEILKTHETSFCDRPISATVDYLTYG--SADF 117
+L R+G + L L P +V +E L TH DRP L +G S
Sbjct: 38 QLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQILGFGPRSQGV 97
Query: 118 SFAPYGPYWKFMKKLCMTQL----LGGQTLNQFIPIRSEEIRRFMQLMLKKAKASEAVDV 173
A YGP W+ ++ ++ L LG ++L Q++ +EE +
Sbjct: 98 FLARYGPAWREQRRFSVSTLRNLGLGKKSLEQWV---TEEAACLCAAFANHS--GRPFRP 152
Query: 174 GKELIRLTNNVVSRMTMGQICSNNDKEADEVR-----KLVQETAELTGKFNLQDYIWFCK 228
L + +NV++ +T G+ E D+ R L QE + F +
Sbjct: 153 NGLLDKAVSNVIASLTCGRRF-----EYDDPRFLRLLDLAQEGLKEESGFLREVLNAVPV 207
Query: 229 NIDLQGFGKRLKEVRRKFDNMMERIIKEHQEARKINKERGKDYAPMDLLDMLLDISEDE- 287
+ + ++ ++ F ++ ++ EH+ + P DL + L E
Sbjct: 208 DRHIPALAGKVLRFQKAFLTQLDELLTEHRMTWDPAQ------PPRDLTEAFLAEMEKAK 261
Query: 288 -SSEIKLTRENIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEIDSVVGKSR 346
+ E EN++ + D+F+AG T++ T+ W L +I HPD+ ++ ++EID V+G+ R
Sbjct: 262 GNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVR 321
Query: 347 LVEESDIINLPYLQALVKETLRLHPTGPMS 376
E D ++PY A++ E R P+
Sbjct: 322 RPEMGDQAHMPYTTAVIHEVQRFGDIVPLG 351
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 139/330 (42%), Gaps = 29/330 (8%)
Query: 60 KLSIRYGPLIHLFLGSVPCIVACSPETAKEILKTHETSFCDRPISATVDYLTYG--SADF 117
+L R+G + L L P +V +E L TH DRP L +G S
Sbjct: 38 QLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQILGFGPRSQGV 97
Query: 118 SFAPYGPYWKFMKKLCMTQL----LGGQTLNQFIPIRSEEIRRFMQLMLKKAKASEAVDV 173
A YGP W+ ++ ++ L LG ++L Q++ +EE +
Sbjct: 98 FLARYGPAWREQRRFSVSTLRNLGLGKKSLEQWV---TEEAACLCAAFANHS--GRPFRP 152
Query: 174 GKELIRLTNNVVSRMTMGQICSNNDKEADEVR-----KLVQETAELTGKFNLQDYIWFCK 228
L + +NV++ +T G+ E D+ R L QE + F +
Sbjct: 153 NGLLDKAVSNVIASLTCGRRF-----EYDDPRFLRLLDLAQEGLKEESGFLREVLNAVPV 207
Query: 229 NIDLQGFGKRLKEVRRKFDNMMERIIKEHQEARKINKERGKDYAPMDLLDMLLDISEDE- 287
+ + ++ ++ F ++ ++ EH+ + P DL + L E
Sbjct: 208 LLHIPALAGKVLRFQKAFLTQLDELLTEHRMTWDPAQ------PPRDLTEAFLAEMEKAK 261
Query: 288 -SSEIKLTRENIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEIDSVVGKSR 346
+ E EN++ + D+F+AG T++ T+ W L +I HPD+ ++ ++EID V+G+ R
Sbjct: 262 GNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVR 321
Query: 347 LVEESDIINLPYLQALVKETLRLHPTGPMS 376
E D ++PY A++ E R P+
Sbjct: 322 RPEMGDQAHMPYTTAVIHEVQRFGDIVPLG 351
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 100/354 (28%), Positives = 157/354 (44%), Gaps = 28/354 (7%)
Query: 28 SKITSS----LPPSPMALPIIGH-LHLLAPIPHQALHKLSIRYGPLIHLFLGSVPCIVAC 82
+K TSS LPP P LP+IG+ L + ++L LS YGP+ L+ G +V
Sbjct: 2 AKKTSSGRGKLPPGPTPLPVIGNILQIDIKDVSKSLTNLSKIYGPVFTLYFGLERMVVLH 61
Query: 83 SPETAKEILKTHETSFCDRPISATVDYLTYGSADFSFAPYGPYWKFMKKLCMTQLLGGQT 142
E KE L F R + G F+ G WK +++ + L
Sbjct: 62 GYEVVKEALIDLGEEFSGRGHFPLAERANRGFG-IVFS-NGKRWKEIRRFSLMTLRNFGM 119
Query: 143 LNQFIPIRSEEIRRFMQLMLKKAKASEAVDVGKELIRLTNNVVSRMTMGQICSNNDKEAD 202
+ I R +E R + L+K KAS D L NV+ + + D++
Sbjct: 120 GKRSIEDRVQEEARCLVEELRKTKAS-PCDPTFILGCAPCNVICSIIFQKRFDYKDQQFL 178
Query: 203 EVRKLVQETAELTGKFNLQDYIWFCKN----IDL--QGFGKRLKEVRRKFDNMMERIIKE 256
+ + + E + +I C N ID K LK + +++E++ KE
Sbjct: 179 NLMEKLNENIRIVS----TPWIQICNNFPTIIDYFPGTHNKLLKNLAFMESDILEKV-KE 233
Query: 257 HQEARKINKERGKDYAPMDLLDMLLDISEDE--SSEIKLTRENIKAFILDIFAAGTDTSA 314
HQE+ IN P D +D L E E + + + T EN+ D+ AGT+T++
Sbjct: 234 HQESMDINN-------PRDFIDCFLIKMEKEKQNQQSEFTIENLVITAADLLGAGTETTS 286
Query: 315 ITVEWALAELINHPDMMKKAREEIDSVVGKSRLVEESDIINLPYLQALVKETLR 368
T+ +AL L+ HP++ K +EEI+ VVG++R D ++PY A+V E R
Sbjct: 287 TTLRYALLLLLKHPEVTAKVQEEIERVVGRNRSPCMQDRGHMPYTDAVVHEVQR 340
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 166/352 (47%), Gaps = 23/352 (6%)
Query: 28 SKITSS---LPPSPMALPIIGHL------HLLAPIPHQALHKLSIRYGPLIHLFLGSVPC 78
+K TSS LPP P LP++G+L LL ++ +L +YG + ++LGS P
Sbjct: 2 AKKTSSKGKLPPGPSPLPVLGNLLQMDRKGLL-----RSFLRLREKYGDVFTVYLGSRPV 56
Query: 79 IVACSPETAKEILKTHETSFCDRPISATVDYLTYGSADFSFAPYGPYWKFMKKLCMTQLL 138
+V C + +E L +F R A VD + G FA G W+ +++ + +
Sbjct: 57 VVLCGTDAIREALVDQAEAFSGRGKIAVVDPIFQGYG-VIFA-NGERWRALRRFSLATMR 114
Query: 139 GGQTLNQFIPIRSEEIRRFMQLMLKKAKASEAVDVGKELIRLTNNVVSRMTMGQICSNND 198
+ + R +E R + L+K+K + +D +T+N++ + G+ D
Sbjct: 115 DFGMGKRSVEERIQEEARCLVEELRKSKGA-LLDNTLLFHSITSNIICSIVFGKRFDYKD 173
Query: 199 KEADEVRKLVQETAELTGKFNLQDYIWFCKNID-LQGFGKRLKEVRRKFDNMMERIIKEH 257
+ L ++ L F+ Q + F + G +++ ++ + + + +++H
Sbjct: 174 PVFLRLLDLFFQSFSLISSFSSQVFELFSGFLKYFPGTHRQIYRNLQEINTFIGQSVEKH 233
Query: 258 QEARKINKERGKDYAPMDLLDMLLDISEDESSEIKLTRENIKAFILDIFAAGTDTSAITV 317
+ ++ +D+ + LL M D S D SSE +N+ +L +FAAGT+T++ T+
Sbjct: 234 RAT--LDPSNPRDFIDVYLLRMEKDKS-DPSSEFH--HQNLILTVLSLFAAGTETTSTTL 288
Query: 318 EWALAELINHPDMMKKAREEIDSVVGKSRLVEESDIINLPYLQALVKETLRL 369
+ ++ +P + ++ ++EI+ V+G R D +PY A++ E RL
Sbjct: 289 RYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRL 340
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 165/358 (46%), Gaps = 35/358 (9%)
Query: 28 SKITSS---LPPSPMALPIIGHL------HLLAPIPHQALHKLSIRYGPLIHLFLGSVPC 78
+K TSS LPP P LP++G+L LL ++ +L +YG + ++LGS P
Sbjct: 2 AKKTSSKGKLPPGPSPLPVLGNLLQMDRKGLL-----RSFLRLREKYGDVFTVYLGSRPV 56
Query: 79 IVACSPETAKEILKTHETSFCDRPISATVDYLTYGSADFSFAPYGPYWKFMKKLCMTQLL 138
+V C + +E L +F R A VD + G FA G W+ +++ + +
Sbjct: 57 VVLCGTDAIREALVDQAEAFSGRGKIAVVDPIFQGYG-VIFA-NGERWRALRRFSLATMR 114
Query: 139 GGQTLNQFIPIRSEEIRRFMQLMLKKAKASEAVDVGKELIRLTNNVVSRMTMGQICSNND 198
+ + R +E R + L+K+K + +D +T+N++ + G+ D
Sbjct: 115 DFGMGKRSVEERIQEEARCLVEELRKSKGA-LLDNTLLFHSITSNIICSIVFGKRFDYKD 173
Query: 199 KEADEVRKLVQETAELTGKFNLQDYIWFCKNIDLQGFGKRLKEVRRK-FDNMME------ 251
+ L ++ L F+ Q + F GF K R+ + N+ E
Sbjct: 174 PVFLRLLDLFFQSFSLISSFSSQVFELFS------GFLKHFPGTHRQIYRNLQEINTFIG 227
Query: 252 RIIKEHQEARKINKERGKDYAPMDLLDMLLDISEDESSEIKLTRENIKAFILDIFAAGTD 311
+ +++H+ ++ +D+ + LL M D S D SSE +N+ +L +F AGT+
Sbjct: 228 QSVEKHRAT--LDPSNPRDFIDVYLLRMEKDKS-DPSSEFH--HQNLILTVLSLFFAGTE 282
Query: 312 TSAITVEWALAELINHPDMMKKAREEIDSVVGKSRLVEESDIINLPYLQALVKETLRL 369
T++ T+ + ++ +P + ++ ++EI+ V+G R D +PY A++ E RL
Sbjct: 283 TTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRL 340
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 165/352 (46%), Gaps = 23/352 (6%)
Query: 28 SKITSS---LPPSPMALPIIGHL------HLLAPIPHQALHKLSIRYGPLIHLFLGSVPC 78
+K TSS LPP P LP++G+L LL ++ +L +YG + ++LGS P
Sbjct: 2 AKKTSSKGKLPPGPSPLPVLGNLLQMDRKGLL-----RSFLRLREKYGDVFTVYLGSRPV 56
Query: 79 IVACSPETAKEILKTHETSFCDRPISATVDYLTYGSADFSFAPYGPYWKFMKKLCMTQLL 138
+V C + +E L +F R A VD + G FA G W+ +++ + +
Sbjct: 57 VVLCGTDAIREALVDQAEAFSGRGKIAVVDPIFQGYG-VIFA-NGERWRALRRFSLATMR 114
Query: 139 GGQTLNQFIPIRSEEIRRFMQLMLKKAKASEAVDVGKELIRLTNNVVSRMTMGQICSNND 198
+ + R +E R + L+K+K + +D +T+N++ + G+ D
Sbjct: 115 DFGMGKRSVEERIQEEARCLVEELRKSKGA-LLDNTLLFHSITSNIICSIVFGKRFDYKD 173
Query: 199 KEADEVRKLVQETAELTGKFNLQDYIWFCKNID-LQGFGKRLKEVRRKFDNMMERIIKEH 257
+ L ++ L F+ Q + F + G +++ ++ + + + +++H
Sbjct: 174 PVFLRLLDLFFQSFSLISSFSSQVFELFSGFLKYFPGTHRQIYRNLQEINTFIGQSVEKH 233
Query: 258 QEARKINKERGKDYAPMDLLDMLLDISEDESSEIKLTRENIKAFILDIFAAGTDTSAITV 317
+ ++ +D+ + LL M D S D SSE +N+ +L +F AGT+T++ T+
Sbjct: 234 RAT--LDPSNPRDFIDVYLLRMEKDKS-DPSSEFH--HQNLILTVLSLFFAGTETTSTTL 288
Query: 318 EWALAELINHPDMMKKAREEIDSVVGKSRLVEESDIINLPYLQALVKETLRL 369
+ ++ +P + ++ ++EI+ V+G R D +PY A++ E RL
Sbjct: 289 RYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRL 340
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 165/352 (46%), Gaps = 23/352 (6%)
Query: 28 SKITSS---LPPSPMALPIIGHL------HLLAPIPHQALHKLSIRYGPLIHLFLGSVPC 78
+K TSS LPP P LP++G+L LL ++ +L +YG + ++LGS P
Sbjct: 2 AKKTSSKGKLPPGPSPLPVLGNLLQMDRKGLL-----RSFLRLREKYGDVFTVYLGSRPV 56
Query: 79 IVACSPETAKEILKTHETSFCDRPISATVDYLTYGSADFSFAPYGPYWKFMKKLCMTQLL 138
+V C + +E L +F R A VD + G FA G W+ +++ + +
Sbjct: 57 VVLCGTDAIREALVDQAEAFSGRGKIAVVDPIFQGYG-VIFA-NGERWRALRRFSLATMR 114
Query: 139 GGQTLNQFIPIRSEEIRRFMQLMLKKAKASEAVDVGKELIRLTNNVVSRMTMGQICSNND 198
+ + R +E R + L+K+K + +D +T+N++ + G+ D
Sbjct: 115 DFGMGKRSVEERIQEEARCLVEELRKSKGA-LLDNTLLFHSITSNIICSIVFGKRFDYKD 173
Query: 199 KEADEVRKLVQETAELTGKFNLQDYIWFCKNID-LQGFGKRLKEVRRKFDNMMERIIKEH 257
+ L ++ L F+ Q + F + G +++ ++ + + + +++H
Sbjct: 174 PVFLRLLDLFFQSFSLISSFSSQVFELFSGFLKYFPGTHRQIYRNLQEINTFIGQSVEKH 233
Query: 258 QEARKINKERGKDYAPMDLLDMLLDISEDESSEIKLTRENIKAFILDIFAAGTDTSAITV 317
+ ++ +D+ + LL M D S D SSE +N+ +L +F AGT+T++ T+
Sbjct: 234 RAT--LDPSNPRDFIDVYLLRMEKDKS-DPSSEFH--HQNLILTVLSLFFAGTETTSTTL 288
Query: 318 EWALAELINHPDMMKKAREEIDSVVGKSRLVEESDIINLPYLQALVKETLRL 369
+ ++ +P + ++ ++EI+ V+G R D +PY A++ E RL
Sbjct: 289 RYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRL 340
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 165/352 (46%), Gaps = 23/352 (6%)
Query: 28 SKITSS---LPPSPMALPIIGHL------HLLAPIPHQALHKLSIRYGPLIHLFLGSVPC 78
+K TSS LPP P LP++G+L LL ++ +L +YG + ++LGS P
Sbjct: 2 AKKTSSKGKLPPGPSPLPVLGNLLQMDRKGLL-----RSFLRLREKYGDVFTVYLGSRPV 56
Query: 79 IVACSPETAKEILKTHETSFCDRPISATVDYLTYGSADFSFAPYGPYWKFMKKLCMTQLL 138
+V C + +E L +F R A VD + G FA G W+ +++ + +
Sbjct: 57 VVLCGTDAIREALVDQAEAFSGRGKIAVVDPIFQGYG-VIFA-NGERWRALRRFSLATMR 114
Query: 139 GGQTLNQFIPIRSEEIRRFMQLMLKKAKASEAVDVGKELIRLTNNVVSRMTMGQICSNND 198
+ + R +E R + L+K+K + +D +T+N++ + G+ D
Sbjct: 115 DFGMGKRSVEERIQEEARCLVEELRKSKGA-LLDNTLLFHSITSNIICSIVFGKRFDYKD 173
Query: 199 KEADEVRKLVQETAELTGKFNLQDYIWFCKNID-LQGFGKRLKEVRRKFDNMMERIIKEH 257
+ L ++ L F+ Q + F + G +++ ++ + + + +++H
Sbjct: 174 PVFLRLLDLFFQSFSLISSFSSQVFELFSGFLKYFPGTHRQIYRNLQEINTFIGQSVEKH 233
Query: 258 QEARKINKERGKDYAPMDLLDMLLDISEDESSEIKLTRENIKAFILDIFAAGTDTSAITV 317
+ ++ +D+ + LL M D S D SSE +N+ +L +F AGT+T++ T+
Sbjct: 234 RAT--LDPSNPRDFIDVYLLRMEKDKS-DPSSEFH--HQNLILTVLSLFFAGTETTSTTL 288
Query: 318 EWALAELINHPDMMKKAREEIDSVVGKSRLVEESDIINLPYLQALVKETLRL 369
+ ++ +P + ++ ++EI+ V+G R D +PY A++ E RL
Sbjct: 289 RYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRL 340
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 138/317 (43%), Gaps = 15/317 (4%)
Query: 64 RYGPLIHLFLGSVPCIVACSPETAKEILKTHETSFCDRPISATVD--YLTYGSADFSFAP 121
+YG + + LG P ++ C E +E L +F R A VD + YG FA
Sbjct: 42 KYGDVFTVHLGPRPVVMLCGVEAIREALVDKAEAFSGRGKIAMVDPFFRGYGVI---FAN 98
Query: 122 YGPYWKFMKKLCMTQLLGGQTLNQFIPIRSEEIRRFMQLMLKKAKASEAVDVGKELIRLT 181
G WK +++ +T + + + R +E + + L+K+K + +D +T
Sbjct: 99 -GNRWKVLRRFSVTTMRDFGMGKRSVEERIQEEAQCLIEELRKSKGA-LMDPTFLFQSIT 156
Query: 182 NNVVSRMTMGQICSNNDKEADEVRKLVQETAELTGKFNLQDYIWFCKNIDLQGFGKRLKE 241
N++ + G+ D+E ++ L +T L Q + F GF K
Sbjct: 157 ANIICSIVFGKRFHYQDQEFLKMLNLFYQTFSLISSVFGQLFELFS------GFLKHFPG 210
Query: 242 VRRKFDNMMERIIKEHQEARKINKERGKDYAPMDLLDMLLDISEDESSEI--KLTRENIK 299
R+ ++ I + + ++E AP DL+D L E E S + + +N+
Sbjct: 211 AHRQVYKNLQEINAYIGHSVEKHRETLDPSAPRDLIDTYLLHMEKEKSNAHSEFSHQNLN 270
Query: 300 AFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEIDSVVGKSRLVEESDIINLPYL 359
L +F AGT+T++ T+ + ++ +P + ++ EI+ V+G R E D +PY
Sbjct: 271 LNTLSLFFAGTETTSTTLRYGFLLMLKYPHVAERVYREIEQVIGPHRPPELHDRAKMPYT 330
Query: 360 QALVKETLRLHPTGPMS 376
+A++ E R PM
Sbjct: 331 EAVIYEIQRFSDLLPMG 347
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 135/334 (40%), Gaps = 26/334 (7%)
Query: 53 IPHQALHKLSIRYGPLIHLFLGSVPCIVACSPETAKEILKTHETSFCDRPISATVDYLTY 112
+PH + K S YG + L LG + +V + KE L F DRP +T
Sbjct: 35 LPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPLFMKMTK 94
Query: 113 GSADFSFAPYGPYWKFMKKLCMTQL-LGGQTLNQFIPIRSEEIRRFMQLMLKKAKASEAV 171
+ + YG W ++L + G F EE + F + +
Sbjct: 95 MGGLLN-SRYGRGWVDHRRLAVNSFRYFGYGQKSFESKILEETKFFNDAI--ETYKGRPF 151
Query: 172 DVGKELIRLTNNVVSRMTMGQICSNNDKEADEVRKLVQETAELTGK---FNLQDYIWFCK 228
D + + +N+ + + G+ + D + + +L E EL F + W
Sbjct: 152 DFKQLITNAVSNITNLIIFGERFTYEDTDFQHMIELFSENVELAASASVFLYNAFPW--- 208
Query: 229 NIDLQGFGKRLKEVRRK--FDNMMERIIKEHQEARKINKERGKDYAPMDLLDMLLD---- 282
I + FGK + R + + R+I E +N+ K P +D LD
Sbjct: 209 -IGILPFGKHQQLFRNAAVVYDFLSRLI----EKASVNR---KPQLPQHFVDAYLDEMDQ 260
Query: 283 ISEDESSEIKLTRENIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEIDSVV 342
D SS ++EN+ + ++ AGT+T+ + WA+ + +P++ + ++EID ++
Sbjct: 261 GKNDPSS--TFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIM 318
Query: 343 GKSRLVEESDIINLPYLQALVKETLRLHPTGPMS 376
G + D +PY +A++ E LR P+
Sbjct: 319 GPNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLG 352
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 133/327 (40%), Gaps = 26/327 (7%)
Query: 53 IPHQALHKLSIRYGPLIHLFLGSVPCIVACSPETAKEILKTHETSFCDRPISATVDYLTY 112
+PH + K S YG + L LG + +V + KE L F DRP +T
Sbjct: 35 LPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPLFMKMTK 94
Query: 113 GSADFSFAPYGPYWKFMKKLCMTQL-LGGQTLNQFIPIRSEEIRRFMQLMLKKAKASEAV 171
+ + YG W ++L + G F EE + F + +
Sbjct: 95 MGGLLN-SRYGRGWVDHRRLAVNSFRYFGYGQKSFESKILEETKFFNDAI--ETYKGRPF 151
Query: 172 DVGKELIRLTNNVVSRMTMGQICSNNDKEADEVRKLVQETAELTGK---FNLQDYIWFCK 228
D + + +N+ + + G+ + D + + +L E EL F + W
Sbjct: 152 DFKQLITNAVSNITNLIIFGERFTYEDTDFQHMIELFSENVELAASASVFLYNAFPW--- 208
Query: 229 NIDLQGFGKRLKEVRRK--FDNMMERIIKEHQEARKINKERGKDYAPMDLLDMLLD---- 282
I + FGK + R + + R+I E +N+ K P +D LD
Sbjct: 209 -IGILPFGKHQQLFRNAAVVYDFLSRLI----EKASVNR---KPQLPQHFVDAYLDEMDQ 260
Query: 283 ISEDESSEIKLTRENIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEIDSVV 342
D SS ++EN+ + ++ AGT+T+ + WA+ + +P++ + ++EID ++
Sbjct: 261 GKNDPSS--TFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIM 318
Query: 343 GKSRLVEESDIINLPYLQALVKETLRL 369
G + D +PY +A++ E LR
Sbjct: 319 GPNGKPSWDDKCKMPYTEAVLHEVLRF 345
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 157/349 (44%), Gaps = 32/349 (9%)
Query: 36 PSPMALPIIGHL---HLLAPIPHQALHKLSIRYGPLIHLFLGSVPCIVACSPETAKEIL- 91
P P LP +G++ H + HK +YG + + G P + P+ K +L
Sbjct: 18 PGPTPLPFLGNILSYHKGFCMFDMECHK---KYGKVWGFYDGQQPVLAITDPDMIKTVLV 74
Query: 92 KTHETSFCDRPISATVDYLTYGSADFSFAPYGPYWKFMKKLCMTQLLGGQTLNQFIPIRS 151
K + F +R V ++ + S A WK ++ L G+ L + +PI +
Sbjct: 75 KECYSVFTNRRPFGPVGFM---KSAISIAE-DEEWKRLRSLLSPTFTSGK-LKEMVPIIA 129
Query: 152 EEIRRFMQLMLKKAKASEAVDVGKELIRLTNNVVSRMTMGQICSNNDKEADEVRKLVQET 211
+ ++ + ++A+ + V + + +V++ + G N D + V+ T
Sbjct: 130 QYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFG---VNIDSLNNPQDPFVENT 186
Query: 212 AELTGKFNLQDYIWFCKNIDLQGFGKRLKEV------RRKFDNMMERIIKEHQEARKINK 265
+L +F+ D + +I + F + EV R+ N + + +K +E+R +
Sbjct: 187 KKLL-RFDFLDPFFL--SITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLEDT 243
Query: 266 ERGKDYAPMDLLDMLLDIS---EDESSEIKLTRENIKAFILDIFAAGTDTSAITVEWALA 322
++ + +D L +++D E ES + E + I+ IFA G +T++ + + +
Sbjct: 244 QKHR----VDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFA-GYETTSSVLSFIMY 298
Query: 323 ELINHPDMMKKAREEIDSVVGKSRLVEESDIINLPYLQALVKETLRLHP 371
EL HPD+ +K +EEID+V+ ++ + YL +V ETLRL P
Sbjct: 299 ELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFP 347
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 157/349 (44%), Gaps = 32/349 (9%)
Query: 36 PSPMALPIIGHL---HLLAPIPHQALHKLSIRYGPLIHLFLGSVPCIVACSPETAKEIL- 91
P P LP +G++ H + HK +YG + + G P + P+ K +L
Sbjct: 17 PGPTPLPFLGNILSYHKGFCMFDMECHK---KYGKVWGFYDGQQPVLAITDPDMIKTVLV 73
Query: 92 KTHETSFCDRPISATVDYLTYGSADFSFAPYGPYWKFMKKLCMTQLLGGQTLNQFIPIRS 151
K + F +R V ++ + S A WK ++ L G+ L + +PI +
Sbjct: 74 KECYSVFTNRRPFGPVGFM---KSAISIAE-DEEWKRLRSLLSPTFTSGK-LKEMVPIIA 128
Query: 152 EEIRRFMQLMLKKAKASEAVDVGKELIRLTNNVVSRMTMGQICSNNDKEADEVRKLVQET 211
+ ++ + ++A+ + V + + +V++ + G N D + V+ T
Sbjct: 129 QYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFG---VNIDSLNNPQDPFVENT 185
Query: 212 AELTGKFNLQDYIWFCKNIDLQGFGKRLKEV------RRKFDNMMERIIKEHQEARKINK 265
+L +F+ D + +I + F + EV R+ N + + +K +E+R +
Sbjct: 186 KKLL-RFDFLDPFFL--SITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLEDT 242
Query: 266 ERGKDYAPMDLLDMLLDIS---EDESSEIKLTRENIKAFILDIFAAGTDTSAITVEWALA 322
++ + +D L +++D E ES + E + I+ IFA G +T++ + + +
Sbjct: 243 QKHR----VDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFA-GYETTSSVLSFIMY 297
Query: 323 ELINHPDMMKKAREEIDSVVGKSRLVEESDIINLPYLQALVKETLRLHP 371
EL HPD+ +K +EEID+V+ ++ + YL +V ETLRL P
Sbjct: 298 ELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFP 346
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 157/349 (44%), Gaps = 32/349 (9%)
Query: 36 PSPMALPIIGHL---HLLAPIPHQALHKLSIRYGPLIHLFLGSVPCIVACSPETAKEIL- 91
P P LP +G++ H + HK +YG + + G P + P+ K +L
Sbjct: 19 PGPTPLPFLGNILSYHKGFCMFDMECHK---KYGKVWGFYDGQQPVLAITDPDMIKTVLV 75
Query: 92 KTHETSFCDRPISATVDYLTYGSADFSFAPYGPYWKFMKKLCMTQLLGGQTLNQFIPIRS 151
K + F +R V ++ + S A WK ++ L G+ L + +PI +
Sbjct: 76 KECYSVFTNRRPFGPVGFM---KSAISIAE-DEEWKRLRSLLSPTFTSGK-LKEMVPIIA 130
Query: 152 EEIRRFMQLMLKKAKASEAVDVGKELIRLTNNVVSRMTMGQICSNNDKEADEVRKLVQET 211
+ ++ + ++A+ + V + + +V++ + G N D + V+ T
Sbjct: 131 QYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFG---VNIDSLNNPQDPFVENT 187
Query: 212 AELTGKFNLQDYIWFCKNIDLQGFGKRLKEV------RRKFDNMMERIIKEHQEARKINK 265
+L +F+ D + +I + F + EV R+ N + + +K +E+R +
Sbjct: 188 KKLL-RFDFLDPFFL--SITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLEDT 244
Query: 266 ERGKDYAPMDLLDMLLDIS---EDESSEIKLTRENIKAFILDIFAAGTDTSAITVEWALA 322
++ + +D L +++D E ES + E + I+ IFA G +T++ + + +
Sbjct: 245 QKHR----VDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFA-GYETTSSVLSFIMY 299
Query: 323 ELINHPDMMKKAREEIDSVVGKSRLVEESDIINLPYLQALVKETLRLHP 371
EL HPD+ +K +EEID+V+ ++ + YL +V ETLRL P
Sbjct: 300 ELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFP 348
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 141/315 (44%), Gaps = 26/315 (8%)
Query: 64 RYGPLIHLFLGSVPCIVACSPETAKEIL---KTHETSFCDRPISATVDYLTYGSADFSFA 120
+YGP++ + + ++ SPE+ K+ L K ++ S R + +G S
Sbjct: 22 KYGPVVRVNVFHKTSVIVTSPESVKKFLMSTKYNKDSKMYRALQTVFGERLFGQGLVSEC 81
Query: 121 PYGPYWKFMKKLCMTQLLGGQTLNQFIPIRSEEIRRFMQLMLKKAKASEAVDVGKELIRL 180
Y + K ++ + +L + +E+ + ++++ KA V + L
Sbjct: 82 NYERWHK--QRRVIDLAFSRSSLVSLMETFNEKAEQLVEILEAKADGQTPVSMQDMLTYT 139
Query: 181 TNNVVSRMTMGQICS---NNDKEADEVRKLVQETAELTGKFN-LQDYIWFCKNIDLQGFG 236
+++++ G S K + KL+ E +T N L + L G
Sbjct: 140 AMDILAKAAFGMETSMLLGAQKPLSQAVKLMLEG--ITASRNTLAKF--------LPGKR 189
Query: 237 KRLKEVRRKFDNMMERIIKEHQEARKINKERGKDYAPMDLLDMLLDISEDESSEIKLTRE 296
K+L+EVR + ++ ++ + R+ +RG++ P D+L +L E + E
Sbjct: 190 KQLREVRESI-RFLRQVGRDWVQRRREALKRGEE-VPADILTQILKAEEGAQDD-----E 242
Query: 297 NIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEIDSVVGKSRLVEESDIINL 356
+ + F AG +TSA + + + EL P+++ + + E+D V+G R ++ D+ L
Sbjct: 243 GLLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRYLDFEDLGRL 302
Query: 357 PYLQALVKETLRLHP 371
YL ++KE+LRL+P
Sbjct: 303 QYLSQVLKESLRLYP 317
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Query: 270 DYAPMDLLDMLLDISEDESSEIKLTRENIKAFILDIFAAGTDTSAITVEWALAELINHPD 329
D + D+LD+L+ + E+ + + + I + + AG TS+ T W L EL+ H D
Sbjct: 219 DKSDRDMLDVLIAVKA-ETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRD 277
Query: 330 MMKKAREEIDSVVGKSRLVEESDIINLPYLQALVKETLRLHP 371
+E+D + G R V + +P L+ ++KETLRLHP
Sbjct: 278 AYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHP 319
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Query: 270 DYAPMDLLDMLLDISEDESSEIKLTRENIKAFILDIFAAGTDTSAITVEWALAELINHPD 329
D + D+LD+L+ + E+ + + + I + + AG TS+ T W L EL+ H D
Sbjct: 219 DKSDRDMLDVLIAVKA-ETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRD 277
Query: 330 MMKKAREEIDSVVGKSRLVEESDIINLPYLQALVKETLRLHP 371
+E+D + G R V + +P L+ ++KETLRLHP
Sbjct: 278 AYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHP 319
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Query: 270 DYAPMDLLDMLLDISEDESSEIKLTRENIKAFILDIFAAGTDTSAITVEWALAELINHPD 329
D + D+LD+L+ + E+ + + + I + + AG TS+ T W L EL+ H D
Sbjct: 219 DKSDRDMLDVLIAVKA-ETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRD 277
Query: 330 MMKKAREEIDSVVGKSRLVEESDIINLPYLQALVKETLRLHP 371
+E+D + G R V + +P L+ ++KETLRLHP
Sbjct: 278 AYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHP 319
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Query: 270 DYAPMDLLDMLLDISEDESSEIKLTRENIKAFILDIFAAGTDTSAITVEWALAELINHPD 329
D + D+LD+L+ + E+ + + + I + + AG TS+ T W L EL+ H D
Sbjct: 219 DKSDRDMLDVLIAVKA-ETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRD 277
Query: 330 MMKKAREEIDSVVGKSRLVEESDIINLPYLQALVKETLRLHP 371
+E+D + G R V + +P L+ ++KETLRLHP
Sbjct: 278 AYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHP 319
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 134/340 (39%), Gaps = 35/340 (10%)
Query: 46 HLHLLAPIPHQALHKLSIRYGPLIHLFLGSVPCIVACSPETAKEILKTHETSFCDRPISA 105
HLHL HQ +L GP+ LG + PE +++ + C +
Sbjct: 37 HLHLEM---HQTFQEL----GPIFRYNLGGPRMVCVMLPEDVEKLQQVDSLHPCRMILEP 89
Query: 106 TVDYLTY-GSADFSFAPYGPYWKFMKKLCMTQLLGGQTLNQFIPIRSEEIRRFMQLMLKK 164
V Y + G F GP W+F + +L + + +F+P+ R F Q + KK
Sbjct: 90 WVAYRQHRGHKCGVFLLNGPEWRFNRLRLNPDVLSPKAVQRFLPMVDAVARDFSQALKKK 149
Query: 165 ----AKASEAVDVGKELIRLTNNVVSRMTMGQICSNNDKEADEVRKLVQETAELTGKFNL 220
A+ S +DV + T + G+ E+ K +
Sbjct: 150 VLQNARGSLTLDVQPSIFHYTIEASNLALFGERLGLVGHSPSSASLNFLHALEVMFKSTV 209
Query: 221 QDYI-------WFCKNIDLQGFGKRLKEVRRKFDNMMERIIKEHQEARKINKERGKDYAP 273
Q W + + F + + + DN +++I +E + R + Y
Sbjct: 210 QLMFMPRSLSRWISPKVWKEHF-EAWDCIFQYGDNCIQKIYQE------LAFNRPQHYTG 262
Query: 274 MDLLDMLLDISEDESSEIKLTRENIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKK 333
+ + ++LL + +L+ E IKA +++ A DT+A + L EL +PD+ +
Sbjct: 263 I-VAELLL--------KAELSLEAIKANSMELTAGSVDTTAFPLLMTLFELARNPDVQQI 313
Query: 334 AREEIDSVVGKSRLVEESDIINLPYLQALVKETLRLHPTG 373
R+E + + LP L+A +KETLRL+P G
Sbjct: 314 LRQESLAAAASISEHPQKATTELPLLRAALKETLRLYPVG 353
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 136/328 (41%), Gaps = 43/328 (13%)
Query: 64 RYGPLIHLFLGSVPCIVACSPETAKEILKTHETSFCDR-PISATVDYLTYGSADFS--FA 120
+YGP+ LG++ + PE + K E S+ +R I + Y Y F
Sbjct: 46 KYGPIYREKLGNLESVYIIHPEDVAHLFK-FEGSYPERYDIPPWLAYHRYYQKPIGVLFK 104
Query: 121 PYGPYWKFMKKLCMTQLLGGQTLNQFIPIRSEEIRRFMQLMLKKAKASEAV----DVGKE 176
G WK + + T+++ + + FIP+ + + F+ L+ K+ K + D+ ++
Sbjct: 105 KSGT-WKKDRVVLNTEVMAPEAIKNFIPLLNPVSQDFVSLLHKRIKQQGSGKFVGDIKED 163
Query: 177 LIRLTNNVVSRMTMGQICSNNDKEADEVRKLVQETAELTG-KFNLQDYIWFCKNIDLQGF 235
L ++ + G+ +++ET KF Y F ++ L
Sbjct: 164 LFHFAFESITNVMFGERLG-----------MLEETVNPEAQKFIDAVYKMFHTSVPLLNV 212
Query: 236 GKRLKEVRRKFDNMMERIIKEHQEARKINKERGKDYAPMDLLDMLLDISEDESSEI---- 291
L + R + ++H A + + Y + D+ I
Sbjct: 213 PPELYRLFRT------KTWRDHVAAWDTIFNKAEKYTEIFYQDLRRKTEFRNYPGILYCL 266
Query: 292 ----KLTRENIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEIDSVVGKSRL 347
K+ E++KA I ++ A G +T+++T++W L E+ ++ + REE V +R
Sbjct: 267 LKSEKMLLEDVKANITEMLAGGVNTTSMTLQWHLYEMARSLNVQEMLREE----VLNARR 322
Query: 348 VEESDIINL----PYLQALVKETLRLHP 371
E DI + P L+A +KETLRLHP
Sbjct: 323 QAEGDISKMLQMVPLLKASIKETLRLHP 350
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 61/110 (55%), Gaps = 4/110 (3%)
Query: 267 RGKDYAPMDLLDMLLDISEDESSEIKLTRENIKAFILDIFAAGTDTSAITVEWALAELIN 326
R + Y+ D L DI + + L+++ + A + ++ A +T+A ++ W L L
Sbjct: 257 RLQRYSQQPGADFLCDIYQQDH----LSKKELYAAVTELQLAAVETTANSLMWILYNLSR 312
Query: 327 HPDMMKKAREEIDSVVGKSRLVEESDIINLPYLQALVKETLRLHPTGPMS 376
+P ++ +E+ SV+ ++ D+ N+PYL+A +KE++RL P+ P +
Sbjct: 313 NPQAQRRLLQEVQSVLPDNQTPRAEDLRNMPYLKACLKESMRLTPSVPFT 362
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 3/110 (2%)
Query: 263 INKERGKDYAPMDLLDMLLDISEDESSEIKLTRENIKAFILDIFAAGTDTSAITVEWALA 322
I + R P DLL LL+ +D I + I ++ I G++T A T+ W L
Sbjct: 231 IAERRASGQKPDDLLTALLEAKDDNGDPIG--EQEIHDQVVAILTPGSETIASTIMWLLQ 288
Query: 323 ELINHPDMMKKAREEIDSVVGKSRLVEESDIINLPYLQALVKETLRLHPT 372
L +HP+ + R+E+++V G R V D+ L + ++ E +RL P
Sbjct: 289 ALADHPEHADRIRDEVEAVTG-GRPVAFEDVRKLRHTGNVIVEAMRLRPA 337
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 50/80 (62%)
Query: 292 KLTRENIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEIDSVVGKSRLVEES 351
K++ E+IKA + ++ A G DT+++T++W L E+ + + R E+ + +++ +
Sbjct: 270 KMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGDMAT 329
Query: 352 DIINLPYLQALVKETLRLHP 371
+ +P L+A +KETLRLHP
Sbjct: 330 MLQLVPLLKASIKETLRLHP 349
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 50/80 (62%)
Query: 292 KLTRENIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEIDSVVGKSRLVEES 351
K++ E+IKA + ++ A G DT+++T++W L E+ + + R E+ + +++ +
Sbjct: 267 KMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGDMAT 326
Query: 352 DIINLPYLQALVKETLRLHP 371
+ +P L+A +KETLRLHP
Sbjct: 327 MLQLVPLLKASIKETLRLHP 346
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 74/138 (53%), Gaps = 11/138 (7%)
Query: 237 KRLKEVRRKFDNMMERIIKEHQEARKINKERGKDYAPMDLLDMLLDISEDESSEIKLTRE 296
++ +E + ++++++II + RK + E+ D LL +L+ + E+ E L E
Sbjct: 203 RQFQEDIKVMNDLVDKIIAD----RKASGEQSDD-----LLTHMLNGKDPETGE-PLDDE 252
Query: 297 NIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEIDSVVGKSRLVEESDIINL 356
NI+ I+ AAG + ++ + +AL L+ +P +++KA EE V+ + + L
Sbjct: 253 NIRYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQL 311
Query: 357 PYLQALVKETLRLHPTGP 374
Y+ ++ E LRL PTGP
Sbjct: 312 KYVGMVLNEALRLWPTGP 329
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 74/138 (53%), Gaps = 11/138 (7%)
Query: 237 KRLKEVRRKFDNMMERIIKEHQEARKINKERGKDYAPMDLLDMLLDISEDESSEIKLTRE 296
++ +E + ++++++II + RK + E+ D LL +L+ + E+ E L E
Sbjct: 204 RQFQEDIKVMNDLVDKIIAD----RKASGEQSDD-----LLTHMLNGKDPETGE-PLDDE 253
Query: 297 NIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEIDSVVGKSRLVEESDIINL 356
NI+ I+ AAG + ++ + +AL L+ +P +++KA EE V+ + + L
Sbjct: 254 NIRYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQL 312
Query: 357 PYLQALVKETLRLHPTGP 374
Y+ ++ E LRL PTGP
Sbjct: 313 KYVGMVLNEALRLWPTGP 330
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 148/356 (41%), Gaps = 49/356 (13%)
Query: 36 PSPMALPIIGHLHLL-APIPHQALHKLSIRYGPLIHLFLGSVPCIVACSPETAKEILKTH 94
P P + +L LL P QAL K++ G +F P V + + I +
Sbjct: 7 PQPKTFGELKNLPLLNTDKPVQALMKIADELG---EIFKFEAPGRVTRYLSSQRLIKEAA 63
Query: 95 ETSFCDRPISATVDYLTYGSADFSFAPYGPYWKFMKKLCMTQLLGGQTLNQFIPIRSEEI 154
+ S D+ +S + ++ + D F W K C N +P S++
Sbjct: 64 DESRFDKNLSQALKFVRDFAGDGLFTS----WTHEKNWCKAH-------NILLPSFSQQA 112
Query: 155 RRFMQLML-----------KKAKASEAVDVGKELIRLTNNVVSRMTMGQICSN--NDKEA 201
+ M+ ++ A E ++V +++ RLT + + ++ D+
Sbjct: 113 MKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLSGFNYRFNSFYRDQPH 172
Query: 202 DEVRKLVQETAELTGKFNLQDYIWFCKNIDLQGFG---KRLKEVRRKFDNMMERIIKEHQ 258
+ +V+ E K N D + ++ +E + ++++++II +
Sbjct: 173 PFITSMVRALDEAMNKLQ-------RANPDDPAYDENKRQFQEDIKVMNDLVDKIIAD-- 223
Query: 259 EARKINKERGKDYAPMDLLDMLLDISEDESSEIKLTRENIKAFILDIFAAGTDTSAITVE 318
RK + E+ D LL +L+ + E+ E L ENI+ I+ AG +T++ +
Sbjct: 224 --RKASGEQSDD-----LLTHMLNGKDPETGE-PLDDENIRYQIITFLIAGHETTSGLLS 275
Query: 319 WALAELINHPDMMKKAREEIDSVVGKSRLVEESDIINLPYLQALVKETLRLHPTGP 374
+AL L+ +P +++KA EE V+ + + L Y+ ++ E LRL PT P
Sbjct: 276 FALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEALRLWPTAP 330
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 237 KRLKEVRRKFDNMMERIIKEHQEARKINKERGKDYAPMDLLDMLLDISEDESSEIKLTRE 296
++ +E + ++++++II + RK + E+ D LL +L+ + E+ E L E
Sbjct: 204 RQFQEDIKVMNDLVDKIIAD----RKASGEQSDD-----LLTHMLNGKDPETGE-PLDDE 253
Query: 297 NIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEIDSVVGKSRLVEESDIINL 356
NI+ I+ AAG + ++ + +AL L+ +P ++KA EE V+ + + L
Sbjct: 254 NIRYQIITFLAAGHEATSGLLSFALYFLVKNPHELQKAAEEAARVLVDP-VPSHKQVKQL 312
Query: 357 PYLQALVKETLRLHPTGP 374
Y+ ++ E LRL PT P
Sbjct: 313 KYVGMVLNEALRLWPTAP 330
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 151/353 (42%), Gaps = 43/353 (12%)
Query: 36 PSPMALPIIGHLHLL-APIPHQALHKLSIRYGPLIHLFLGSVPCIVACSPETAKEILKTH 94
P P + +L LL P QAL K++ G +F P V + + I +
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELG---EIFKFEAPGRVTRYLSSQRLIKEAC 62
Query: 95 ETSFCDRPISATVDYLT--YGSADFSFAPYGPYWKFMKKLCMTQLLGGQTLNQFIPIRSE 152
+ S D+ +S + ++ +G F+ + WK + + Q + + + +
Sbjct: 63 DESRFDKNLSQALKFVRDFFGDGLFTSWTHEKNWKKAHNILLPSF-SQQAMKGYHAMMVD 121
Query: 153 EIRRFMQLMLKKAKASEAVDVGKELIRLTNNVVSRMTMGQICSNN--------DKEADEV 204
+ +Q ++ A E ++V +++ RLT + + +C N D+ +
Sbjct: 122 IAVQLVQ-KWERLNADEHIEVPEDMTRLTLDTIG------LCGFNYRFNSFYRDQPHPFI 174
Query: 205 RKLVQETAELTGKFNLQDYIWFCKNIDLQGFG---KRLKEVRRKFDNMMERIIKEHQEAR 261
+V+ E K N D + ++ +E + ++++++II + R
Sbjct: 175 TSMVRALDEAMNKLQR-------ANPDDPAYDENKRQFQEDIKVMNDLVDKIIAD----R 223
Query: 262 KINKERGKDYAPMDLLDMLLDISEDESSEIKLTRENIKAFILDIFAAGTDTSAITVEWAL 321
K + E+ D LL +L+ + E+ E L ENI+ I+ AG +T++ + +AL
Sbjct: 224 KASGEQSDD-----LLTHMLNGKDPETGE-PLDDENIRYQIITFLIAGHETTSGLLSFAL 277
Query: 322 AELINHPDMMKKAREEIDSVVGKSRLVEESDIINLPYLQALVKETLRLHPTGP 374
L+ +P +++KA EE V+ + + L Y+ ++ E LRL PT P
Sbjct: 278 YFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEALRLWPTAP 329
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 73/138 (52%), Gaps = 11/138 (7%)
Query: 237 KRLKEVRRKFDNMMERIIKEHQEARKINKERGKDYAPMDLLDMLLDISEDESSEIKLTRE 296
++ +E + ++++++II + RK + E+ D LL +L+ + E+ E L E
Sbjct: 206 RQFQEDIKVMNDLVDKIIAD----RKASGEQSDD-----LLTHMLNGKDPETGE-PLDDE 255
Query: 297 NIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEIDSVVGKSRLVEESDIINL 356
NI+ I+ AG +T++ + +AL L+ +P +++KA EE V+ + + L
Sbjct: 256 NIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQL 314
Query: 357 PYLQALVKETLRLHPTGP 374
Y+ ++ E LRL PT P
Sbjct: 315 KYVGMVLNEALRLWPTAP 332
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 73/138 (52%), Gaps = 11/138 (7%)
Query: 237 KRLKEVRRKFDNMMERIIKEHQEARKINKERGKDYAPMDLLDMLLDISEDESSEIKLTRE 296
++ +E + ++++++II + RK + E+ D LL +L+ + E+ E L E
Sbjct: 204 RQFQEDIKVMNDLVDKIIAD----RKASGEQSDD-----LLTHMLNGKDPETGE-PLDDE 253
Query: 297 NIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEIDSVVGKSRLVEESDIINL 356
NI+ I+ AG +T++ + +AL L+ +P +++KA EE V+ + + L
Sbjct: 254 NIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQL 312
Query: 357 PYLQALVKETLRLHPTGP 374
Y+ ++ E LRL PT P
Sbjct: 313 KYVGMVLNEALRLWPTAP 330
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 73/138 (52%), Gaps = 11/138 (7%)
Query: 237 KRLKEVRRKFDNMMERIIKEHQEARKINKERGKDYAPMDLLDMLLDISEDESSEIKLTRE 296
++ +E + ++++++II + RK + E+ D LL +L+ + E+ E L E
Sbjct: 203 RQFQEDIKVMNDLVDKIIAD----RKASGEQSDD-----LLTHMLNGKDPETGE-PLDDE 252
Query: 297 NIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEIDSVVGKSRLVEESDIINL 356
NI+ I+ AG +T++ + +AL L+ +P +++KA EE V+ + + L
Sbjct: 253 NIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQL 311
Query: 357 PYLQALVKETLRLHPTGP 374
Y+ ++ E LRL PT P
Sbjct: 312 KYVGMVLNEALRLWPTAP 329
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 73/138 (52%), Gaps = 11/138 (7%)
Query: 237 KRLKEVRRKFDNMMERIIKEHQEARKINKERGKDYAPMDLLDMLLDISEDESSEIKLTRE 296
++ +E + ++++++II + RK + E+ D LL +L+ + E+ E L E
Sbjct: 203 RQFQEDIKVMNDLVDKIIAD----RKASGEQSDD-----LLTHMLNGKDPETGE-PLDDE 252
Query: 297 NIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEIDSVVGKSRLVEESDIINL 356
NI+ I+ AG +T++ + +AL L+ +P +++KA EE V+ + + L
Sbjct: 253 NIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQL 311
Query: 357 PYLQALVKETLRLHPTGP 374
Y+ ++ E LRL PT P
Sbjct: 312 KYVGMVLNEALRLWPTAP 329
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 73/138 (52%), Gaps = 11/138 (7%)
Query: 237 KRLKEVRRKFDNMMERIIKEHQEARKINKERGKDYAPMDLLDMLLDISEDESSEIKLTRE 296
++ +E + ++++++II + RK + E+ D LL +L+ + E+ E L E
Sbjct: 203 RQFQEDIKVMNDLVDKIIAD----RKASGEQSDD-----LLTHMLNGKDPETGE-PLDDE 252
Query: 297 NIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEIDSVVGKSRLVEESDIINL 356
NI+ I+ AG +T++ + +AL L+ +P +++KA EE V+ + + L
Sbjct: 253 NIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQL 311
Query: 357 PYLQALVKETLRLHPTGP 374
Y+ ++ E LRL PT P
Sbjct: 312 KYVGMVLNEALRLWPTAP 329
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 73/138 (52%), Gaps = 11/138 (7%)
Query: 237 KRLKEVRRKFDNMMERIIKEHQEARKINKERGKDYAPMDLLDMLLDISEDESSEIKLTRE 296
++ +E + ++++++II + RK + E+ D LL +L+ + E+ E L E
Sbjct: 203 RQFQEDIKVMNDLVDKIIAD----RKASGEQSDD-----LLTHMLNGKDPETGE-PLDDE 252
Query: 297 NIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEIDSVVGKSRLVEESDIINL 356
NI+ I+ AG +T++ + +AL L+ +P +++KA EE V+ + + L
Sbjct: 253 NIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQL 311
Query: 357 PYLQALVKETLRLHPTGP 374
Y+ ++ E LRL PT P
Sbjct: 312 KYVGMVLNEALRLWPTAP 329
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 73/138 (52%), Gaps = 11/138 (7%)
Query: 237 KRLKEVRRKFDNMMERIIKEHQEARKINKERGKDYAPMDLLDMLLDISEDESSEIKLTRE 296
++ +E + ++++++II + RK + E+ D LL +L+ + E+ E L E
Sbjct: 203 RQFQEDIKVMNDLVDKIIAD----RKASGEQSDD-----LLTHMLNGKDPETGE-PLDDE 252
Query: 297 NIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEIDSVVGKSRLVEESDIINL 356
NI+ I+ AG +T++ + +AL L+ +P +++KA EE V+ + + L
Sbjct: 253 NIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQL 311
Query: 357 PYLQALVKETLRLHPTGP 374
Y+ ++ E LRL PT P
Sbjct: 312 KYVGMVLNEALRLWPTAP 329
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 73/138 (52%), Gaps = 11/138 (7%)
Query: 237 KRLKEVRRKFDNMMERIIKEHQEARKINKERGKDYAPMDLLDMLLDISEDESSEIKLTRE 296
++ +E + ++++++II + RK + E+ D LL +L+ + E+ E L E
Sbjct: 203 RQFQEDIKVMNDLVDKIIAD----RKASGEQSDD-----LLTHMLNGKDPETGE-PLDDE 252
Query: 297 NIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEIDSVVGKSRLVEESDIINL 356
NI+ I+ AG +T++ + +AL L+ +P +++KA EE V+ + + L
Sbjct: 253 NIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQL 311
Query: 357 PYLQALVKETLRLHPTGP 374
Y+ ++ E LRL PT P
Sbjct: 312 KYVGMVLNEALRLWPTAP 329
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 73/138 (52%), Gaps = 11/138 (7%)
Query: 237 KRLKEVRRKFDNMMERIIKEHQEARKINKERGKDYAPMDLLDMLLDISEDESSEIKLTRE 296
++ +E + ++++++II + RK + E+ D LL +L+ + E+ E L E
Sbjct: 203 RQFQEDIKVMNDLVDKIIAD----RKASGEQSDD-----LLTHMLNGKDPETGE-PLDDE 252
Query: 297 NIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEIDSVVGKSRLVEESDIINL 356
NI+ I+ AG +T++ + +AL L+ +P +++KA EE V+ + + L
Sbjct: 253 NIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQL 311
Query: 357 PYLQALVKETLRLHPTGP 374
Y+ ++ E LRL PT P
Sbjct: 312 KYVGMVLNEALRLWPTAP 329
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 73/138 (52%), Gaps = 11/138 (7%)
Query: 237 KRLKEVRRKFDNMMERIIKEHQEARKINKERGKDYAPMDLLDMLLDISEDESSEIKLTRE 296
++ +E + ++++++II + RK + E+ D LL +L+ + E+ E L E
Sbjct: 203 RQFQEDIKVMNDLVDKIIAD----RKASGEQSDD-----LLTHMLNGKDPETGE-PLDDE 252
Query: 297 NIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEIDSVVGKSRLVEESDIINL 356
NI+ I+ AG +T++ + +AL L+ +P +++KA EE V+ + + L
Sbjct: 253 NIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQL 311
Query: 357 PYLQALVKETLRLHPTGP 374
Y+ ++ E LRL PT P
Sbjct: 312 KYVGMVLNEALRLWPTAP 329
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 73/138 (52%), Gaps = 11/138 (7%)
Query: 237 KRLKEVRRKFDNMMERIIKEHQEARKINKERGKDYAPMDLLDMLLDISEDESSEIKLTRE 296
++ +E + ++++++II + RK + E+ D LL +L+ + E+ E L E
Sbjct: 203 RQFQEDIKVMNDLVDKIIAD----RKASGEQSDD-----LLTHMLNGKDPETGE-PLDDE 252
Query: 297 NIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEIDSVVGKSRLVEESDIINL 356
NI+ I+ AG +T++ + +AL L+ +P +++KA EE V+ + + L
Sbjct: 253 NIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQL 311
Query: 357 PYLQALVKETLRLHPTGP 374
Y+ ++ E LRL PT P
Sbjct: 312 KYVGMVLNEALRLWPTAP 329
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 73/138 (52%), Gaps = 11/138 (7%)
Query: 237 KRLKEVRRKFDNMMERIIKEHQEARKINKERGKDYAPMDLLDMLLDISEDESSEIKLTRE 296
++ +E + ++++++II + RK + E+ D LL +L+ + E+ E L E
Sbjct: 203 RQFQEDIKVMNDLVDKIIAD----RKASGEQSDD-----LLTHMLNGKDPETGE-PLDDE 252
Query: 297 NIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEIDSVVGKSRLVEESDIINL 356
NI+ I+ AG +T++ + +AL L+ +P +++KA EE V+ + + L
Sbjct: 253 NIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQL 311
Query: 357 PYLQALVKETLRLHPTGP 374
Y+ ++ E LRL PT P
Sbjct: 312 KYVGMVLNEALRLWPTAP 329
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 73/138 (52%), Gaps = 11/138 (7%)
Query: 237 KRLKEVRRKFDNMMERIIKEHQEARKINKERGKDYAPMDLLDMLLDISEDESSEIKLTRE 296
++ +E + ++++++II + RK + E+ D LL +L+ + E+ E L E
Sbjct: 203 RQFQEDIKVMNDLVDKIIAD----RKASGEQSDD-----LLTHMLNGKDPETGE-PLDDE 252
Query: 297 NIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEIDSVVGKSRLVEESDIINL 356
NI+ I+ AG +T++ + +AL L+ +P +++KA EE V+ + + L
Sbjct: 253 NIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQL 311
Query: 357 PYLQALVKETLRLHPTGP 374
Y+ ++ E LRL PT P
Sbjct: 312 KYVGMVLNEALRLWPTAP 329
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 73/138 (52%), Gaps = 11/138 (7%)
Query: 237 KRLKEVRRKFDNMMERIIKEHQEARKINKERGKDYAPMDLLDMLLDISEDESSEIKLTRE 296
++ +E + ++++++II + RK + E+ D LL +L+ + E+ E L E
Sbjct: 206 RQFQEDIKVMNDLVDKIIAD----RKASGEQSDD-----LLTHMLNGKDPETGE-PLDDE 255
Query: 297 NIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEIDSVVGKSRLVEESDIINL 356
NI+ I+ AG +T++ + +AL L+ +P +++KA EE V+ + + L
Sbjct: 256 NIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQL 314
Query: 357 PYLQALVKETLRLHPTGP 374
Y+ ++ E LRL PT P
Sbjct: 315 KYVGMVLNEALRLWPTSP 332
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 73/138 (52%), Gaps = 11/138 (7%)
Query: 237 KRLKEVRRKFDNMMERIIKEHQEARKINKERGKDYAPMDLLDMLLDISEDESSEIKLTRE 296
++ +E + ++++++II + RK + E+ D LL +L+ + E+ E L E
Sbjct: 204 RQFQEDIKVMNDLVDKIIAD----RKASGEQSDD-----LLTHMLNGKDPETGE-PLDDE 253
Query: 297 NIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEIDSVVGKSRLVEESDIINL 356
NI+ I+ AG +T++ + +AL L+ +P +++KA EE V+ + + L
Sbjct: 254 NIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQL 312
Query: 357 PYLQALVKETLRLHPTGP 374
Y+ ++ E LRL PT P
Sbjct: 313 KYVGMVLNEALRLWPTAP 330
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 73/138 (52%), Gaps = 11/138 (7%)
Query: 237 KRLKEVRRKFDNMMERIIKEHQEARKINKERGKDYAPMDLLDMLLDISEDESSEIKLTRE 296
++ +E + ++++++II + RK + E+ D LL +L+ + E+ E L E
Sbjct: 204 RQFQEDIKVMNDLVDKIIAD----RKASGEQSDD-----LLTHMLNGKDPETGE-PLDDE 253
Query: 297 NIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEIDSVVGKSRLVEESDIINL 356
NI+ I+ AG +T++ + +AL L+ +P +++KA EE V+ + + L
Sbjct: 254 NIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQL 312
Query: 357 PYLQALVKETLRLHPTGP 374
Y+ ++ E LRL PT P
Sbjct: 313 KYVGMVLNEALRLWPTAP 330
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 73/138 (52%), Gaps = 11/138 (7%)
Query: 237 KRLKEVRRKFDNMMERIIKEHQEARKINKERGKDYAPMDLLDMLLDISEDESSEIKLTRE 296
++ +E + ++++++II + RK + E+ D LL +L+ + E+ E L E
Sbjct: 203 RQFQEDIKVMNDLVDKIIAD----RKASGEQSDD-----LLTHMLNGKDPETGE-PLDDE 252
Query: 297 NIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEIDSVVGKSRLVEESDIINL 356
NI+ I+ AG +T++ + +AL L+ +P +++KA EE V+ + + L
Sbjct: 253 NIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQL 311
Query: 357 PYLQALVKETLRLHPTGP 374
Y+ ++ E LRL PT P
Sbjct: 312 KYVGMVLNEALRLWPTAP 329
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 293 LTRENIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEIDSVVGKSRLVEESD 352
LTREN+ IL++ A DT ++++ + L + HP++ + +EI +V+G+ R ++ D
Sbjct: 291 LTRENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIGE-RDIKIDD 349
Query: 353 IINLPYLQALVKETLRLHPT 372
I L ++ + E++R P
Sbjct: 350 IQKLKVMENFIYESMRYQPV 369
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 151/353 (42%), Gaps = 43/353 (12%)
Query: 36 PSPMALPIIGHLHLL-APIPHQALHKLSIRYGPLIHLFLGSVPCIVACSPETAKEILKTH 94
P P + +L LL P QAL K++ G +F P V C + + I +
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELG---EIFKFEAPGRVTCYLSSQRLIKEAC 62
Query: 95 ETSFCDRPISATVDYLTYGSAD--FSFAPYGPYWKFMKKLCMTQLLGGQTLNQFIPIRSE 152
+ S D+ +S + ++ + D + + WK + + Q + + + +
Sbjct: 63 DESRFDKNLSQALKFVRDFAGDGLLTSWTHEKNWKKAHNILLPSF-SQQAMKGYHAMMVD 121
Query: 153 EIRRFMQLMLKKAKASEAVDVGKELIRLTNNVVSRMTMGQICSNN--------DKEADEV 204
+ +Q ++ A E ++V +++ RLT + + +C N D+ +
Sbjct: 122 IAVQLVQ-KWERLNADEHIEVPEDMTRLTLDTIG------LCGFNYRFNSFYRDQPHPFI 174
Query: 205 RKLVQETAELTGKFNLQDYIWFCKNIDLQGFG---KRLKEVRRKFDNMMERIIKEHQEAR 261
+V+ E K N D + ++ +E + ++++++II + R
Sbjct: 175 TSMVRALDEAMNKLQR-------ANPDDPAYDENKRQFQEDIKVMNDLVDKIIAD----R 223
Query: 262 KINKERGKDYAPMDLLDMLLDISEDESSEIKLTRENIKAFILDIFAAGTDTSAITVEWAL 321
K + E+ D LL +L+ + E+ E L ENI+ I+ AG ++++ + +AL
Sbjct: 224 KASGEQSDD-----LLTHMLNGKDPETGE-PLDDENIRYQIITFLIAGHESTSGLLSFAL 277
Query: 322 AELINHPDMMKKAREEIDSVVGKSRLVEESDIINLPYLQALVKETLRLHPTGP 374
L+ +P +++KA EE V+ + + L Y+ ++ E LRL PT P
Sbjct: 278 YFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEALRLWPTAP 329
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 151/353 (42%), Gaps = 43/353 (12%)
Query: 36 PSPMALPIIGHLHLL-APIPHQALHKLSIRYGPLIHLFLGSVPCIVACSPETAKEILKTH 94
P P + +L LL P QAL K++ G +F P V C + + I +
Sbjct: 7 PQPKTFGELKNLPLLNTDKPVQALMKIADELG---EIFKFEAPGRVTCYLSSQRLIKEAC 63
Query: 95 ETSFCDRPISATVDYLTYGSAD--FSFAPYGPYWKFMKKLCMTQLLGGQTLNQFIPIRSE 152
+ S D+ +S + ++ + D + + WK + + Q + + + +
Sbjct: 64 DESRFDKNLSQALKFVRDFAGDGLLTSWTHEKNWKKAHNILLPSF-SQQAMKGYHAMMVD 122
Query: 153 EIRRFMQLMLKKAKASEAVDVGKELIRLTNNVVSRMTMGQICSNN--------DKEADEV 204
+ +Q ++ A E ++V +++ RLT + + +C N D+ +
Sbjct: 123 IAVQLVQ-KWERLNADEHIEVPEDMTRLTLDTIG------LCGFNYRFNSFYRDQPHPFI 175
Query: 205 RKLVQETAELTGKFNLQDYIWFCKNIDLQGFG---KRLKEVRRKFDNMMERIIKEHQEAR 261
+V+ E K N D + ++ +E + ++++++II + R
Sbjct: 176 TSMVRALDEAMNKLQR-------ANPDDPAYDENKRQFQEDIKVMNDLVDKIIAD----R 224
Query: 262 KINKERGKDYAPMDLLDMLLDISEDESSEIKLTRENIKAFILDIFAAGTDTSAITVEWAL 321
K + E+ D LL +L+ + E+ E L ENI+ I+ AG ++++ + +AL
Sbjct: 225 KASGEQSDD-----LLTHMLNGKDPETGE-PLDDENIRYQIITFLIAGHESTSGLLSFAL 278
Query: 322 AELINHPDMMKKAREEIDSVVGKSRLVEESDIINLPYLQALVKETLRLHPTGP 374
L+ +P +++KA EE V+ + + L Y+ ++ E LRL PT P
Sbjct: 279 YFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEALRLWPTAP 330
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 151/353 (42%), Gaps = 43/353 (12%)
Query: 36 PSPMALPIIGHLHLL-APIPHQALHKLSIRYGPLIHLFLGSVPCIVACSPETAKEILKTH 94
P P + +L LL P QAL K++ G +F P V C + + I +
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELG---EIFKFEAPGRVTCYLSSQRLIKEAC 62
Query: 95 ETSFCDRPISATVDYLTYGSAD--FSFAPYGPYWKFMKKLCMTQLLGGQTLNQFIPIRSE 152
+ S D+ +S + ++ + D + + WK + + Q + + + +
Sbjct: 63 DESRFDKNLSQALKFVRDFAGDGLLTSWTHEKNWKKAHNILLPSF-SQQAMKGYHAMMVD 121
Query: 153 EIRRFMQLMLKKAKASEAVDVGKELIRLTNNVVSRMTMGQICSNN--------DKEADEV 204
+ +Q ++ A E ++V +++ RLT + + +C N D+ +
Sbjct: 122 IAVQLVQ-KWERLNADEHIEVPEDMTRLTLDTIG------LCGFNYRFNSFYRDQPHPFI 174
Query: 205 RKLVQETAELTGKFNLQDYIWFCKNIDLQGFG---KRLKEVRRKFDNMMERIIKEHQEAR 261
+V+ E K N D + ++ +E + ++++++II + R
Sbjct: 175 TSMVRALDEAMNKLQR-------ANPDDPAYDENKRQFQEDIKVMNDLVDKIIAD----R 223
Query: 262 KINKERGKDYAPMDLLDMLLDISEDESSEIKLTRENIKAFILDIFAAGTDTSAITVEWAL 321
K + E+ D LL +L+ + E+ E L ENI+ I+ AG ++++ + +AL
Sbjct: 224 KASGEQSDD-----LLTHMLNGKDPETGE-PLDDENIRYQIITFLIAGHESTSGLLSFAL 277
Query: 322 AELINHPDMMKKAREEIDSVVGKSRLVEESDIINLPYLQALVKETLRLHPTGP 374
L+ +P +++KA EE V+ + + L Y+ ++ E LRL PT P
Sbjct: 278 YFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEALRLWPTAP 329
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 237 KRLKEVRRKFDNMMERIIKEHQEARKINKERGKDYAPMDLLDMLLDISEDESSEIKLTRE 296
++ +E + ++++++II + RK + E+ D LL +L+ + E+ E L E
Sbjct: 203 RQFQEDIKVMNDLVDKIIAD----RKASGEQSDD-----LLTHMLNGKDPETGE-PLDDE 252
Query: 297 NIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEIDSVVGKSRLVEESDIINL 356
NI+ I+ AAG + ++ + +AL L+ +P ++KA EE V+ + + L
Sbjct: 253 NIRYQIITFLAAGHEATSGLLSFALYFLVKNPHELQKAAEEAARVLVDP-VPSYKQVKQL 311
Query: 357 PYLQALVKETLRLHPTGP 374
Y+ ++ E LRL PT P
Sbjct: 312 KYVGMVLNEALRLWPTAP 329
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 73/138 (52%), Gaps = 11/138 (7%)
Query: 237 KRLKEVRRKFDNMMERIIKEHQEARKINKERGKDYAPMDLLDMLLDISEDESSEIKLTRE 296
++ +E + ++++++II + RK + E+ D LL +L+ + E+ E L E
Sbjct: 203 RQFQEDIKVMNDLVDKIIAD----RKASGEQSDD-----LLTHMLNGKDPETGE-PLDDE 252
Query: 297 NIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEIDSVVGKSRLVEESDIINL 356
NI+ I+ AG +T++ + +AL L+ +P +++KA EE V+ + + L
Sbjct: 253 NIRYQIITELIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQL 311
Query: 357 PYLQALVKETLRLHPTGP 374
Y+ ++ E LRL PT P
Sbjct: 312 KYVGMVLNEALRLWPTAP 329
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 237 KRLKEVRRKFDNMMERIIKEHQEARKINKERGKDYAPMDLLDMLLDISEDESSEIKLTRE 296
++ +E + ++++++II + RK + E+ D LL +L+ + E+ E L E
Sbjct: 203 RQFQEDIKVMNDLVDKIIAD----RKASGEQSDD-----LLTHMLNGKDPETGE-PLDDE 252
Query: 297 NIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEIDSVVGKSRLVEESDIINL 356
NI+ I+ G +T++ + +AL L+ +P +++KA EE V+ + + L
Sbjct: 253 NIRYQIITFLICGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQL 311
Query: 357 PYLQALVKETLRLHPTGP 374
Y+ ++ E LRL PT P
Sbjct: 312 KYVGMVLNEALRLWPTAP 329
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 237 KRLKEVRRKFDNMMERIIKEHQEARKINKERGKDYAPMDLLDMLLDISEDESSEIKLTRE 296
++ +E + ++++++II + RK + E+ D LL +L+ + E+ E L E
Sbjct: 203 RQFQEDIKVMNDLVDKIIAD----RKASGEQSDD-----LLTHMLNGKDPETGE-PLDDE 252
Query: 297 NIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEIDSVVGKSRLVEESDIINL 356
NI+ I+ AG + ++ + +AL L+ +P +++KA EE V+ + + L
Sbjct: 253 NIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQL 311
Query: 357 PYLQALVKETLRLHPTGP 374
Y+ ++ E LRL PT P
Sbjct: 312 KYVGMVLNEALRLWPTAP 329
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 237 KRLKEVRRKFDNMMERIIKEHQEARKINKERGKDYAPMDLLDMLLDISEDESSEIKLTRE 296
++ +E + ++++++II + RK + E+ D LL +L+ + E+ E L E
Sbjct: 203 RQFQEDIKVMNDLVDKIIAD----RKASGEQSDD-----LLTHMLNGKDPETGE-PLDDE 252
Query: 297 NIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEIDSVVGKSRLVEESDIINL 356
NI+ I+ AG + ++ + +AL L+ +P +++KA EE V+ + + L
Sbjct: 253 NIRYQIITFLIAGHENTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQL 311
Query: 357 PYLQALVKETLRLHPTGP 374
Y+ ++ E LRL PT P
Sbjct: 312 KYVGMVLNEALRLWPTAP 329
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 237 KRLKEVRRKFDNMMERIIKEHQEARKINKERGKDYAPMDLLDMLLDISEDESSEIKLTRE 296
++ +E + ++++++II + RK + E+ D LL +L+ + E+ E L E
Sbjct: 203 RQFQEDIKVMNDLVDKIIAD----RKASGEQSDD-----LLTHMLNGKDPETGE-PLDDE 252
Query: 297 NIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEIDSVVGKSRLVEESDIINL 356
NI+ I+ AG + ++ + +AL L+ +P +++KA EE V+ + + L
Sbjct: 253 NIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQL 311
Query: 357 PYLQALVKETLRLHPTGP 374
Y+ ++ E LRL PT P
Sbjct: 312 KYVGMVLNEALRLWPTAP 329
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 237 KRLKEVRRKFDNMMERIIKEHQEARKINKERGKDYAPMDLLDMLLDISEDESSEIKLTRE 296
++ +E + ++++++II + RK + E+ D LL +L+ + E+ E L E
Sbjct: 203 RQFQEDIKVMNDLVDKIIAD----RKASGEQSDD-----LLTHMLNGKDPETGE-PLDDE 252
Query: 297 NIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEIDSVVGKSRLVEESDIINL 356
NI+ I+ G +T++ + +AL L+ +P +++KA EE V+ + + L
Sbjct: 253 NIRYQIITFLIQGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQL 311
Query: 357 PYLQALVKETLRLHPTGP 374
Y+ ++ E LRL PT P
Sbjct: 312 KYVGMVLNEALRLWPTAP 329
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 237 KRLKEVRRKFDNMMERIIKEHQEARKINKERGKDYAPMDLLDMLLDISEDESSEIKLTRE 296
++ +E + ++++++II + RK + E+ D LL +L+ + E+ E L E
Sbjct: 203 RQFQEDIKVMNDLVDKIIAD----RKASGEQSDD-----LLTHMLNGKDPETGE-PLDDE 252
Query: 297 NIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEIDSVVGKSRLVEESDIINL 356
NI+ I+ AG + ++ + +AL L+ +P +++KA EE V+ + + L
Sbjct: 253 NIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQL 311
Query: 357 PYLQALVKETLRLHPTGP 374
Y+ ++ E LRL PT P
Sbjct: 312 KYVGMVLNEALRLWPTAP 329
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 237 KRLKEVRRKFDNMMERIIKEHQEARKINKERGKDYAPMDLLDMLLDISEDESSEIKLTRE 296
++ +E + ++++++II + RK + E+ D LL +L+ + E+ E L E
Sbjct: 203 RQFQEDIKVMNDLVDKIIAD----RKASGEQSDD-----LLTHMLNGKDPETGE-PLDDE 252
Query: 297 NIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEIDSVVGKSRLVEESDIINL 356
NI+ I+ G +T++ + +AL L+ +P +++KA EE V+ + + L
Sbjct: 253 NIRYQIITFLIKGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQL 311
Query: 357 PYLQALVKETLRLHPTGP 374
Y+ ++ E LRL PT P
Sbjct: 312 KYVGMVLNEALRLWPTAP 329
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 237 KRLKEVRRKFDNMMERIIKEHQEARKINKERGKDYAPMDLLDMLLDISEDESSEIKLTRE 296
++ +E + ++++++II + RK + E+ D LL +L+ + E+ E L E
Sbjct: 203 RQFQEDIKVMNDLVDKIIAD----RKASGEQSDD-----LLTHMLNGKDPETGE-PLDDE 252
Query: 297 NIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEIDSVVGKSRLVEESDIINL 356
NI+ I+ G +T++ + +AL L+ +P +++KA EE V+ + + L
Sbjct: 253 NIRYQIITFLIMGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQL 311
Query: 357 PYLQALVKETLRLHPTGP 374
Y+ ++ E LRL PT P
Sbjct: 312 KYVGMVLNEALRLWPTAP 329
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 237 KRLKEVRRKFDNMMERIIKEHQEARKINKERGKDYAPMDLLDMLLDISEDESSEIKLTRE 296
++ +E + ++++++II + RK + E+ D LL +L+ + E+ E L E
Sbjct: 203 RQFQEDIKVMNDLVDKIIAD----RKASGEQSDD-----LLTHMLNGKDPETGE-PLDDE 252
Query: 297 NIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEIDSVVGKSRLVEESDIINL 356
NI+ I+ G +T++ + +AL L+ +P +++KA EE V+ + + L
Sbjct: 253 NIRYQIITFLIHGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQL 311
Query: 357 PYLQALVKETLRLHPTGP 374
Y+ ++ E LRL PT P
Sbjct: 312 KYVGMVLNEALRLWPTAP 329
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 237 KRLKEVRRKFDNMMERIIKEHQEARKINKERGKDYAPMDLLDMLLDISEDESSEIKLTRE 296
++ +E + ++++++II + RK + E+ D LL +L+ + E+ E L E
Sbjct: 203 RQFQEDIKVMNDLVDKIIAD----RKASGEQSDD-----LLTHMLNGKDPETGE-PLDDE 252
Query: 297 NIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEIDSVVGKSRLVEESDIINL 356
NI+ I+ G +T++ + +AL L+ +P +++KA EE V+ + + L
Sbjct: 253 NIRYQIITFLIEGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQL 311
Query: 357 PYLQALVKETLRLHPTGP 374
Y+ ++ E LRL PT P
Sbjct: 312 KYVGMVLNEALRLWPTAP 329
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 237 KRLKEVRRKFDNMMERIIKEHQEARKINKERGKDYAPMDLLDMLLDISEDESSEIKLTRE 296
++ +E + ++++++II + RK + E+ D LL +L + E+ E L E
Sbjct: 204 RQFQEDIKVMNDLVDKIIAD----RKASGEQSDD-----LLTHMLHGKDPETGE-PLDDE 253
Query: 297 NIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEIDSVVGKSRLVEESDIINL 356
NI+ I+ AG +T++ + +AL L+ +P +++KA EE V+ + + L
Sbjct: 254 NIRYQIITFLIAGHETTSGLLTFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQL 312
Query: 357 PYLQALVKETLRLHPTGP 374
Y+ ++ E LR+ PT P
Sbjct: 313 KYVGMVLNEALRIWPTAP 330
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 71/138 (51%), Gaps = 11/138 (7%)
Query: 237 KRLKEVRRKFDNMMERIIKEHQEARKINKERGKDYAPMDLLDMLLDISEDESSEIKLTRE 296
++ +E + ++++++II + RK + E+ D LL +L + E+ E L E
Sbjct: 209 RQFQEDIKVMNDLVDKIIAD----RKASGEQSDD-----LLTHMLHGKDPETGE-PLDDE 258
Query: 297 NIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEIDSVVGKSRLVEESDIINL 356
NI+ I+ AG +T++ + + L L+ +P +++KA EE V+ + + L
Sbjct: 259 NIRYQIVTFLIAGHETTSGLLSFTLYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQL 317
Query: 357 PYLQALVKETLRLHPTGP 374
Y+ ++ E LRL PT P
Sbjct: 318 KYVGMVLNEALRLWPTAP 335
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 124/335 (37%), Gaps = 31/335 (9%)
Query: 41 LPIIGHLHLLAPIPHQALHKLSIRYGPLIHLFLGSVPCIVACSPETAKEILKTHETSFCD 100
+P +GH P + L +YGP+ + + A + +
Sbjct: 20 IPFLGHAIAFGKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNA 79
Query: 101 RPISATVDYLTYGSADFSFAPYGPYWKFMKKLCMTQLLGGQTLNQFIPIRSEEIRRFMQL 160
+ + + +G P P + KK+ + L Q + I +E + + +
Sbjct: 80 EDVYSRLTTPVFGKGVAYDVP-NPVFLEQKKMLKSGLNIAH-FKQHVSIIEKETKEYFE- 136
Query: 161 MLKKAKASEAVDVGKELIRLTNNVVSRMTMGQICSNNDKEADEVRKLVQETAELTGKFNL 220
++ + ELI LT S G+ + E K+ Q A+L G F+
Sbjct: 137 SWGESGEKNVFEALSELIILT---ASHCLHGKEIRSQLNE-----KVAQLYADLDGGFSH 188
Query: 221 QDYI---WFCKNIDLQGFGKRLKEVRRKFDNMMERIIKEHQEARKINKERGKDYAPMDLL 277
++ W + L F +R + R D + I K Q KI+ D+L
Sbjct: 189 AAWLLPGW----LPLPSFRRRDRAHREIKDIFYKAIQKRRQSQEKID----------DIL 234
Query: 278 DMLLDISEDESSEIKLTRENIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREE 337
LLD + + LT + + ++ + AG TS+ T W L + KK E
Sbjct: 235 QTLLDATYKDGR--PLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLE 292
Query: 338 IDSVVGKSRLVEESDII-NLPYLQALVKETLRLHP 371
+V G++ D + +L L +KETLRL P
Sbjct: 293 QKTVCGENLPPLTYDQLKDLNLLDRCIKETLRLRP 327
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 70/138 (50%), Gaps = 11/138 (7%)
Query: 237 KRLKEVRRKFDNMMERIIKEHQEARKINKERGKDYAPMDLLDMLLDISEDESSEIKLTRE 296
++ +E + ++++++II + RK + E+ D LL +L+ + E+ E L
Sbjct: 203 RQFQEDIKVMNDLVDKIIAD----RKASGEQSDD-----LLTQMLNGKDPETGE-PLDDG 252
Query: 297 NIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEIDSVVGKSRLVEESDIINL 356
NI I+ AG +T++ + +AL L+ +P +++K EE V+ + + L
Sbjct: 253 NISYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKVAEEATRVLVDP-VPSYKQVKQL 311
Query: 357 PYLQALVKETLRLHPTGP 374
Y+ ++ E LRL PT P
Sbjct: 312 KYVGMVLNEALRLWPTAP 329
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 47/84 (55%), Gaps = 11/84 (13%)
Query: 296 ENIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEID----------SVVGKS 345
E K ++ ++A+ +T T W+L ++I +P+ MK A EE+ S+ G
Sbjct: 257 EKAKTHLVVLWASQANTIPATF-WSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNP 315
Query: 346 RLVEESDIINLPYLQALVKETLRL 369
+ ++++ +LP L +++KE+LRL
Sbjct: 316 ICLSQAELNDLPVLDSIIKESLRL 339
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 47/84 (55%), Gaps = 11/84 (13%)
Query: 296 ENIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEID----------SVVGKS 345
E K ++ ++A+ +T T W+L ++I +P+ MK A EE+ S+ G
Sbjct: 257 EKAKTHLVVLWASQANTIPATF-WSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNP 315
Query: 346 RLVEESDIINLPYLQALVKETLRL 369
+ ++++ +LP L +++KE+LRL
Sbjct: 316 ICLSQAELNDLPVLDSIIKESLRL 339
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 102/233 (43%), Gaps = 33/233 (14%)
Query: 141 QTLNQFIPIRSEEIRRFMQLMLKKAKASEAVDVGKELIRLTNNVVSRMTMGQICSNNDKE 200
+TL+ ++P ++ +++ + KA+E + +L R+T +V + + MG+ S N +
Sbjct: 115 RTLDSYLPKMDGIVQGYLE---QWGKANEVIWY-PQLRRMTFDVAATLFMGEKVSQNPQL 170
Query: 201 ADEVRKLVQETAELTGKFNLQDYIWFCKNIDLQG--FGKRLKEVRRKFDNMMERIIKEHQ 258
+Q G F+L I L FGK + R +E+IIK Q
Sbjct: 171 FPWFETYIQ------GLFSLP--------IPLPNTLFGKS-QRARALLLAELEKIIKARQ 215
Query: 259 EARKINKERGKDYAPMDLLDMLLDISEDESSEIKLTRENIKAFILDIFAAGTDTSAITVE 318
+ + D L +LL +D + + L +K IL + AG +T +
Sbjct: 216 QQPPSEE---------DALGILLAARDDNNQPLSLP--ELKDQILLLLFAGHETLTSALS 264
Query: 319 WALAELINHPDMMKKAREEIDSVVGKSRLVEESDIINLPYLQALVKETLRLHP 371
L H D+ ++ R+E + + L E+ + +PYL +++E LRL P
Sbjct: 265 SFCLLLGQHSDIRERVRQEQNKLQLSQELTAET-LKKMPYLDQVLQEVLRLIP 316
>pdb|3B98|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B98|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B99|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
pdb|3B99|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
Length = 475
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 22/141 (15%)
Query: 244 RKFDNMMERII-----KEHQEARKINKER--------GKDYAPMD--LLDMLLDISEDES 288
R+FD ++ ++ KE ++ +E+ G D P + L + +DE
Sbjct: 189 RRFDKLLPKLARTTVNKEEKQIASAAREKLWKWLTPSGLDRKPREQSWLGSYVKQLQDEG 248
Query: 289 SEIKLTRENIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEIDSVVGKSRLV 348
+ ++ R +A +L ++ + W + L+ HP+ ++ REEI GK +
Sbjct: 249 IDAEMQR---RAMLLQLWVTQGNAGPAAF-WVMGYLLTHPEALRAVREEIQG--GKHLRL 302
Query: 349 EESDIINLPYLQALVKETLRL 369
EE N P +++ ETLRL
Sbjct: 303 EERQ-KNTPVFDSVLWETLRL 322
>pdb|1PKF|A Chain A, Crystal Structure Of Epothilone D-Bound Cytochrome
P450epok
Length = 419
Score = 35.4 bits (80), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 266 ERGKDYAPMDLLDMLLDISEDESSEIKLTRENIKAFILDIFAAGTDTSAITVEWALAELI 325
ER ++ D+L MLL D S +L+ + + A + I AAGTDT+ + +A+ L+
Sbjct: 215 ERRRNPLENDVLTMLLQAEADGS---RLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLL 271
Query: 326 NHPDMMKKAREE 337
P+ ++ + E
Sbjct: 272 RSPEALELVKAE 283
>pdb|1Q5D|A Chain A, Epothilone B-Bound Cytochrome P450epok
pdb|1Q5E|A Chain A, Substrate-Free Cytochrome P450epok
Length = 419
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 266 ERGKDYAPMDLLDMLLDISEDESSEIKLTRENIKAFILDIFAAGTDTSAITVEWALAELI 325
ER ++ D+L MLL D S +L+ + + A + I AAGTDT+ + +A+ L+
Sbjct: 215 ERRRNPLENDVLTMLLQAEADGS---RLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLL 271
Query: 326 NHPDMMKKAREE 337
P+ ++ + E
Sbjct: 272 RSPEALELVKAE 283
>pdb|2WHW|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WHW|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
Length = 436
Score = 34.7 bits (78), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Query: 260 ARKINKERGKDYAPMDLLDMLLDISEDESSEIKLTRENIKAFILDIFAAGTDTSAITVEW 319
+R I+ +RG+D DLL L+ S+++ S +LT E + + AG +T+ +
Sbjct: 219 SRLIDSKRGQDGE--DLLSALVRTSDEDGS--RLTSEELLGMAHILLVAGHETTVNLIAN 274
Query: 320 ALAELINHPDMMKKAREEI 338
+ L++HPD + R ++
Sbjct: 275 GMYALLSHPDQLAALRADM 293
>pdb|2VZ7|A Chain A, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZ7|B Chain B, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZM|A Chain A, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
pdb|2VZM|B Chain B, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
Length = 436
Score = 34.7 bits (78), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Query: 260 ARKINKERGKDYAPMDLLDMLLDISEDESSEIKLTRENIKAFILDIFAAGTDTSAITVEW 319
+R I+ +RG+D DLL L+ S+++ S +LT E + + AG +T+ +
Sbjct: 219 SRLIDSKRGQDGE--DLLSALVRTSDEDGS--RLTSEELLGMAHILLVAGHETTVNLIAN 274
Query: 320 ALAELINHPDMMKKAREEI 338
+ L++HPD + R ++
Sbjct: 275 GMYALLSHPDQLAALRADM 293
>pdb|2BVJ|A Chain A, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2BVJ|B Chain B, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2C6H|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C6H|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C7X|A Chain A, Crystal Structure Of Narbomycin-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
Length = 436
Score = 34.7 bits (78), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Query: 260 ARKINKERGKDYAPMDLLDMLLDISEDESSEIKLTRENIKAFILDIFAAGTDTSAITVEW 319
+R I+ +RG+D DLL L+ S+++ S +LT E + + AG +T+ +
Sbjct: 219 SRLIDSKRGQDGE--DLLSALVRTSDEDGS--RLTSEELLGMAHILLVAGHETTVNLIAN 274
Query: 320 ALAELINHPDMMKKAREEI 338
+ L++HPD + R ++
Sbjct: 275 GMYALLSHPDQLAALRADM 293
>pdb|1ODO|A Chain A, 1.85 A Structure Of Cyp154a1 From Streptomyces Coelicolor
A3(2)
Length = 408
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 34/62 (54%)
Query: 275 DLLDMLLDISEDESSEIKLTRENIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKA 334
D+ +L+ +DE +L+ E ++ +L + +AG +T+ ++ A+ L+ PD +
Sbjct: 209 DMTSLLIAARDDEGDGDRLSPEELRDTLLLMISAGYETTVNVIDQAVHTLLTRPDQLALV 268
Query: 335 RE 336
R+
Sbjct: 269 RK 270
>pdb|3EJB|B Chain B, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|D Chain D, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|F Chain F, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|H Chain H, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|B Chain B, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|D Chain D, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|F Chain F, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|H Chain H, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|B Chain B, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|D Chain D, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|F Chain F, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|H Chain H, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
Length = 404
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 266 ERGKDYAPMDLLDMLLDISEDESSEIKLTRENIKAFILDIFAAGTDTSAITVEWALAELI 325
++ K + D++ MLL E + KLT E + + + AG +T+ + ++ L+
Sbjct: 196 QKRKRHPQQDMISMLLKGREKD----KLTEEEAASTCILLAIAGHETTVNLISNSVLCLL 251
Query: 326 NHPDMMKKAREEIDSVVGKSRLVEE 350
HP+ + K RE D ++G + VEE
Sbjct: 252 QHPEQLLKLRENPD-LIGTA--VEE 273
>pdb|1Z8Q|A Chain A, Ferrous Dioxygen Complex Of The A245t Cytochrome P450eryf
Length = 404
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 8/93 (8%)
Query: 251 ERIIKEHQEARKINK------ERGKDYAPMDLLDMLLDISEDESSEIKLTRENIKAFILD 304
ER + Q AR++ ER + DLL L+ + +D+ +L+ + + + L
Sbjct: 180 ERAEQRGQAAREVVNFILDLVERRRTEPGDDLLSALIRVQDDDDG--RLSADELTSIALV 237
Query: 305 IFAAGTDTSAITVEWALAELINHPDMMKKAREE 337
+ AG +TS + L+ HPD + R +
Sbjct: 238 LLLAGFETSVSLIGIGTYLLLTHPDQLALVRRD 270
>pdb|3AGR|A Chain A, Crystal Structure Of Nucleoside Triphosphate Hydrolases
From Neospora Caninum
pdb|3AGR|B Chain B, Crystal Structure Of Nucleoside Triphosphate Hydrolases
From Neospora Caninum
Length = 602
Score = 29.3 bits (64), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 50/115 (43%), Gaps = 15/115 (13%)
Query: 229 NIDLQGFGKRLKEVRRKFDNMMERIIKEHQEARKINKERGKDYAP--MDLLDMLLDISED 286
+I L G GKR +R ++ ++ E E+R ++ +R + P D L+ + ED
Sbjct: 75 SIRLLGAGKRFAGLRGVLESWLDAYAGEDWESRSVDSKRLFQHVPEMEDSARGLMQLLED 134
Query: 287 ESSEI---KLTRE---NIKAFILDIFAAGTDTSAITVEWA-------LAELINHP 328
++ I KLT E ++A + + T +W L LINHP
Sbjct: 135 DAVRILDEKLTEEQKVQVQAMGVPVLLCSTAGVRDFHDWYREALFVILRFLINHP 189
>pdb|1S8E|A Chain A, Crystal Structure Of Mre11-3
pdb|1S8E|B Chain B, Crystal Structure Of Mre11-3
Length = 333
Score = 28.1 bits (61), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 9/55 (16%)
Query: 225 WFCKNIDLQGFGKRLKEVRRKFDNMMERIIKEHQEARKINKERGKDYAPMDLLDM 279
WF N ++ LK + R DN I+ HQ R++++ RG+DY + L D+
Sbjct: 150 WFEANKEI------LKRLFRPTDNA---ILMLHQGVREVSEARGEDYFEIGLGDL 195
>pdb|1II7|A Chain A, Crystal Structure Of P. Furiosus Mre11 With Manganese And
Damp
pdb|1II7|B Chain B, Crystal Structure Of P. Furiosus Mre11 With Manganese And
Damp
Length = 333
Score = 28.1 bits (61), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 9/55 (16%)
Query: 225 WFCKNIDLQGFGKRLKEVRRKFDNMMERIIKEHQEARKINKERGKDYAPMDLLDM 279
WF N ++ LK + R DN I+ HQ R++++ RG+DY + L D+
Sbjct: 150 WFEANKEI------LKRLFRPTDNA---ILMLHQGVREVSEARGEDYFEIGLGDL 195
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.137 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,420,078
Number of Sequences: 62578
Number of extensions: 403261
Number of successful extensions: 1291
Number of sequences better than 100.0: 113
Number of HSP's better than 100.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 63
Number of HSP's that attempted gapping in prelim test: 1169
Number of HSP's gapped (non-prelim): 135
length of query: 376
length of database: 14,973,337
effective HSP length: 100
effective length of query: 276
effective length of database: 8,715,537
effective search space: 2405488212
effective search space used: 2405488212
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.6 bits)