Query         042142
Match_columns 376
No_of_seqs    151 out of 1825
Neff          10.6
Searched_HMMs 46136
Date          Fri Mar 29 03:15:43 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042142.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/042142hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0156 Cytochrome P450 CYP2 s 100.0 2.9E-62 6.4E-67  451.1  37.3  343   25-376    18-365 (489)
  2 PLN02971 tryptophan N-hydroxyl 100.0 1.2E-54 2.7E-59  414.4  36.4  341   30-375    54-405 (543)
  3 PLN03234 cytochrome P450 83B1; 100.0 5.2E-54 1.1E-58  407.9  37.0  346   24-375    19-366 (499)
  4 PLN03112 cytochrome P450 famil 100.0 1.1E-53 2.3E-58  407.0  38.2  349   23-375    22-374 (514)
  5 PLN02687 flavonoid 3'-monooxyg 100.0 1.3E-53 2.7E-58  406.0  36.6  340   30-375    31-375 (517)
  6 PLN00110 flavonoid 3',5'-hydro 100.0   5E-53 1.1E-57  399.8  37.7  341   28-375    26-367 (504)
  7 PLN02183 ferulate 5-hydroxylas 100.0 5.5E-53 1.2E-57  401.5  36.5  346   25-376    28-383 (516)
  8 PLN02966 cytochrome P450 83A1  100.0 9.9E-53 2.1E-57  398.7  36.8  365    1-375     1-369 (502)
  9 KOG0158 Cytochrome P450 CYP3/C 100.0 1.2E-51 2.7E-56  375.4  31.1  330   34-375    32-372 (499)
 10 PLN00168 Cytochrome P450; Prov 100.0 8.4E-51 1.8E-55  386.8  37.7  345   29-375    31-385 (519)
 11 PLN02394 trans-cinnamate 4-mon 100.0 3.3E-50 7.1E-55  382.3  37.2  342   28-376    25-372 (503)
 12 PTZ00404 cytochrome P450; Prov 100.0 1.9E-50 4.1E-55  381.9  35.0  334   28-375    24-361 (482)
 13 PLN02655 ent-kaurene oxidase   100.0 1.7E-49 3.7E-54  373.2  31.2  329   35-376     1-340 (466)
 14 PLN03018 homomethionine N-hydr 100.0 1.5E-48 3.3E-53  370.2  37.9  340   32-375    39-392 (534)
 15 PLN02290 cytokinin trans-hydro 100.0 1.7E-49 3.8E-54  378.2  31.0  330   32-375    41-393 (516)
 16 PLN02500 cytochrome P450 90B1  100.0 8.8E-48 1.9E-52  364.1  31.5  340    7-375    10-362 (490)
 17 KOG0157 Cytochrome P450 CYP4/C 100.0 3.4E-47 7.3E-52  357.5  28.2  332   31-376    33-371 (497)
 18 PLN03195 fatty acid omega-hydr 100.0 2.4E-46 5.2E-51  356.5  31.3  333   35-376    32-391 (516)
 19 PLN02169 fatty acid (omega-1)- 100.0 5.7E-46 1.2E-50  351.1  31.4  330   35-376    33-374 (500)
 20 KOG0159 Cytochrome P450 CYP11/ 100.0 6.8E-46 1.5E-50  330.8  27.7  327   34-375    51-395 (519)
 21 PF00067 p450:  Cytochrome P450 100.0 2.3E-47 4.9E-52  359.8  18.3  331   35-374     1-339 (463)
 22 PLN02774 brassinosteroid-6-oxi 100.0 2.1E-45 4.6E-50  345.2  29.6  315   29-375    27-345 (463)
 23 PLN02738 carotene beta-ring hy 100.0 6.7E-45 1.5E-49  349.2  31.1  318   44-375   142-468 (633)
 24 PLN02196 abscisic acid 8'-hydr 100.0 7.2E-45 1.6E-49  341.4  29.4  313   28-376    30-346 (463)
 25 PLN02302 ent-kaurenoic acid ox 100.0 5.9E-44 1.3E-48  339.0  32.0  321   28-375    37-369 (490)
 26 PLN02936 epsilon-ring hydroxyl 100.0 2.9E-44 6.3E-49  339.3  28.9  331   32-375    11-355 (489)
 27 PLN03141 3-epi-6-deoxocathaste 100.0 6.1E-44 1.3E-48  334.5  30.5  321   29-375     3-333 (452)
 28 PLN02987 Cytochrome P450, fami 100.0 1.6E-42 3.5E-47  324.8  30.8  316   28-375    25-348 (472)
 29 PLN02426 cytochrome P450, fami 100.0 6.1E-41 1.3E-45  316.5  31.1  313   41-375    49-372 (502)
 30 PLN02648 allene oxide synthase 100.0 8.3E-37 1.8E-41  284.5  21.5  317   31-375    15-352 (480)
 31 KOG0684 Cytochrome P450 [Secon 100.0 4.3E-35 9.3E-40  255.7  23.8  318   33-375    31-352 (486)
 32 COG2124 CypX Cytochrome P450 [ 100.0 8.1E-29 1.8E-33  228.1  22.4  270   54-375    24-298 (411)
 33 PF12554 MOZART1:  Mitotic-spin  79.4     7.7 0.00017   23.5   4.7   44  296-339     5-48  (48)
 34 KOG0114 Predicted RNA-binding   74.0      12 0.00026   26.9   5.2   61   31-93     10-76  (124)
 35 PF05952 ComX:  Bacillus compet  57.7      10 0.00023   23.9   2.1   24  320-343     5-28  (57)
 36 PHA03049 IMV membrane protein;  54.2      58  0.0013   21.1   5.6   37   10-46      8-44  (68)
 37 PF13893 RRM_5:  RNA recognitio  52.4      40 0.00086   20.8   4.4   35   58-92      1-39  (56)
 38 PF15300 INT_SG_DDX_CT_C:  INTS  44.9      11 0.00023   24.7   0.8   16  355-370    39-54  (65)
 39 COG0851 MinE Septum formation   44.4      38 0.00082   23.5   3.4   18  327-344    35-52  (88)
 40 PF14129 DUF4296:  Domain of un  43.6   1E+02  0.0023   21.3   5.7   48  295-342    31-78  (87)
 41 PF05172 Nup35_RRM:  Nup53/35/4  41.5      61  0.0013   23.3   4.3   47   53-99     17-79  (100)
 42 PF13625 Helicase_C_3:  Helicas  37.2      63  0.0014   24.4   4.1   40   53-94     75-114 (129)
 43 PF14483 Cut8_M:  Cut8 dimerisa  33.9      72  0.0016   18.3   3.0   17  320-336    18-35  (38)
 44 PRK13991 cell division topolog  30.6 1.1E+02  0.0024   21.4   4.0   19  327-345    35-53  (87)
 45 PRK13467 F0F1 ATP synthase sub  30.3      75  0.0016   20.9   3.0   25  314-338    20-44  (66)
 46 PHA01346 hypothetical protein   28.8      50  0.0011   19.2   1.7   17  327-343    29-46  (53)
 47 PF08285 DPM3:  Dolichol-phosph  28.5      81  0.0018   22.3   3.1   30  314-343    53-82  (91)
 48 PF09926 DUF2158:  Uncharacteri  27.9      60  0.0013   20.2   2.1   17   66-82      4-20  (53)
 49 PF10454 DUF2458:  Protein of u  27.8      83  0.0018   24.6   3.4   25  312-336     7-31  (150)
 50 TIGR01215 minE cell division t  27.6 1.2E+02  0.0027   20.8   3.8   19  326-344    33-51  (81)
 51 COG3954 PrkB Phosphoribulokina  27.3 1.7E+02  0.0037   24.0   5.1   58  307-368    15-88  (289)
 52 PF05961 Chordopox_A13L:  Chord  26.9 1.9E+02  0.0041   19.0   4.4   17   12-28     10-26  (68)
 53 PRK10597 DNA damage-inducible   26.3 1.8E+02  0.0038   20.1   4.3   38   56-93     24-69  (81)
 54 PLN03120 nucleic acid binding   25.9   2E+02  0.0043   24.9   5.6   48   55-102    18-71  (260)
 55 PF15330 SIT:  SHP2-interacting  25.2 2.2E+02  0.0048   20.8   5.0   11   40-50     45-55  (107)
 56 PRK13466 F0F1 ATP synthase sub  25.0 1.1E+02  0.0023   20.2   3.0   25  314-338    20-44  (66)
 57 PLN03134 glycine-rich RNA-bind  24.9 2.1E+02  0.0045   22.1   5.2   39   55-93     48-95  (144)
 58 TIGR01260 ATP_synt_c ATP synth  24.8   1E+02  0.0023   19.6   2.9   23  315-337    11-33  (58)
 59 KOG0149 Predicted RNA-binding   24.7 2.1E+02  0.0046   24.2   5.3   50   53-102    24-82  (247)
 60 PRK00296 minE cell division to  24.2 1.6E+02  0.0035   20.5   4.0   18  327-344    35-52  (86)
 61 TIGR01661 ELAV_HUD_SF ELAV/HuD  24.0 1.8E+02   0.004   26.1   5.6   57   43-101   273-339 (352)
 62 PF14824 Sirohm_synth_M:  Siroh  23.3      98  0.0021   16.7   2.1   16  326-341    14-29  (30)
 63 PF00076 RRM_1:  RNA recognitio  22.3 2.1E+02  0.0046   17.9   4.9   39   55-93     12-58  (70)
 64 PRK02302 hypothetical protein;  22.0 1.9E+02  0.0041   20.3   3.9   33   61-93     22-54  (89)
 65 PRK05880 F0F1 ATP synthase sub  21.6 1.2E+02  0.0027   20.8   2.9   26  313-338    28-53  (81)
 66 smart00362 RRM_2 RNA recogniti  20.5 2.2E+02  0.0048   17.5   5.1   39   55-93     13-58  (72)
 67 PRK13989 cell division topolog  20.3      61  0.0013   22.5   1.2   19  327-345    36-54  (84)

No 1  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=2.9e-62  Score=451.14  Aligned_cols=343  Identities=46%  Similarity=0.788  Sum_probs=295.3

Q ss_pred             HHhcCCCCCCCCCCCCCCccccccccCCC-chHHHHHHHHhcCCeEEEecCCccEEEccCHHHHHHHHHhCCccccCCCC
Q 042142           25 FRRSKITSSLPPSPMALPIIGHLHLLAPI-PHQALHKLSIRYGPLIHLFLGSVPCIVACSPETAKEILKTHETSFCDRPI  103 (376)
Q Consensus        25 ~~~~~~~~~~ppgp~~~p~lG~~~~~~~~-~~~~~~~~~~~yG~i~~~~~g~~~~v~i~dp~~~~~il~~~~~~f~~~~~  103 (376)
                      +.+.+++.++||||+++|++||++++... +|+.+.++.++|||++++++|..|+||++|+++++|+|++++..|++|+.
T Consensus        18 ~~~~~~~~~lPPGP~~lPiIGnl~~l~~~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~   97 (489)
T KOG0156|consen   18 FKKYRKRRNLPPGPPPLPIIGNLHQLGSLPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPD   97 (489)
T ss_pred             HHhccCCCCCCcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCC
Confidence            33334448899999999999999999766 99999999999999999999999999999999999999999999999997


Q ss_pred             c-ccccccccCCceeEeccCChhHHHHHHHHHhhcCchhhhhhhhhhHHHHHHHHHHHHHHhhcCCCceehHHHHHHHHH
Q 042142          104 S-ATVDYLTYGSADFSFAPYGPYWKFMKKLCMTQLLGGQTLNQFIPIRSEEIRRFMQLMLKKAKASEAVDVGKELIRLTN  182 (376)
Q Consensus       104 ~-~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vd~~~~~~~~~~  182 (376)
                      . .....+.++..++.++.+|+.|+.+||++...+++.+.++++.....++++.+++.+.+ ...+++||+...+..++.
T Consensus        98 ~~~~~~~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~-~~~~~~vdl~~~l~~~~~  176 (489)
T KOG0156|consen   98 PTATLKYLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSK-SKKGEPVDLSELLDLLVG  176 (489)
T ss_pred             chhhHHHhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHh-cCCCceeeHHHHHHHHHH
Confidence            2 24456666667888888999999999999999999999999888889999999999987 333379999999999999


Q ss_pred             HHHHHHHhCcccCCCc-hhHHHHHHHHHHHHhhhcCccccchhh-hhhhhc-ccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 042142          183 NVVSRMTMGQICSNND-KEADEVRKLVQETAELTGKFNLQDYIW-FCKNID-LQGFGKRLKEVRRKFDNMMERIIKEHQE  259 (376)
Q Consensus       183 dvi~~~~fg~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~  259 (376)
                      +||++++||.++...+ ....++..++.+.....+.+...+++| ++++++ ..+..+........++.+++.+++++++
T Consensus       177 nvI~~~~fG~rf~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~  256 (489)
T KOG0156|consen  177 NVICRMLFGRRFEEEDEEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHRE  256 (489)
T ss_pred             HHHHHHHhCCccccCCchHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999754 445668888998888888888888888 565553 3356677777777789999999999877


Q ss_pred             HHHhhhccCCCCCcccHHHHHhcccccCcccccCCHHHHHHHHHHHhhcCCcchHHHHHHHHHHHhhChHHHHHHHHHHh
Q 042142          260 ARKINKERGKDYAPMDLLDMLLDISEDESSEIKLTRENIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEID  339 (376)
Q Consensus       260 ~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~aG~dTTa~~l~~~l~~L~~~P~v~~~l~~Ei~  339 (376)
                      .. .  .+    ...|++|.++...+++.... +++++|...+.++++||+||||+|+.|++.+|.+||+||+|+|+||+
T Consensus       257 ~~-~--~~----~~~D~vD~lL~~~~~~~~~~-~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEId  328 (489)
T KOG0156|consen  257 KI-G--DE----EGRDFVDALLKLMKEEKAEG-LTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEID  328 (489)
T ss_pred             hh-c--cC----CCCcHHHHHHHhhcccccCC-CCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence            54 1  11    12799999998754432222 99999999999999999999999999999999999999999999999


Q ss_pred             hhhCCCCCCCcccCCCChhHHHHHHHHhccCCCCCCC
Q 042142          340 SVVGKSRLVEESDIINLPYLQALVKETLRLHPTGPMS  376 (376)
Q Consensus       340 ~v~~~~~~~~~~~l~~lpyl~avikEtlRl~p~~p~~  376 (376)
                      +|+|.++.++.+|+.+||||+|||+|++|++|++|+.
T Consensus       329 ~vvG~~r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~  365 (489)
T KOG0156|consen  329 EVVGKGRLVSESDLPKLPYLKAVIKETLRLHPPLPLL  365 (489)
T ss_pred             HHhCCCCCCChhhhccCHHHHHHHHHHHhcCCCcccc
Confidence            9999888899999999999999999999999999963


No 2  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=1.2e-54  Score=414.40  Aligned_cols=341  Identities=29%  Similarity=0.471  Sum_probs=257.8

Q ss_pred             CCCCCCCCCCCCCccccccccCCC--chHHHHHHHHhcC-CeEEEecCCccEEEccCHHHHHHHHHhCCccccCCCCccc
Q 042142           30 ITSSLPPSPMALPIIGHLHLLAPI--PHQALHKLSIRYG-PLIHLFLGSVPCIVACSPETAKEILKTHETSFCDRPISAT  106 (376)
Q Consensus        30 ~~~~~ppgp~~~p~lG~~~~~~~~--~~~~~~~~~~~yG-~i~~~~~g~~~~v~i~dp~~~~~il~~~~~~f~~~~~~~~  106 (376)
                      ++.++||||+++|++||++.+..+  .+..+.+++++|| +++++++|+.++|+++||++++++|.+++..|.+|+....
T Consensus        54 r~~~lPPGP~~lPiiGnl~~l~~~~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~~  133 (543)
T PLN02971         54 KLHPLPPGPTGFPIVGMIPAMLKNRPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTYA  133 (543)
T ss_pred             CCCCCCcCCCCCCcccchHHhccCCcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCcccc
Confidence            345789999999999999887432  3677899999999 8999999999999999999999999998888988875433


Q ss_pred             ccccccCCceeEeccCChhHHHHHHHHHhhcCchhhhhhhhhhHHHHHHHHHHHHHHhhcCCCceehHHHHHHHHHHHHH
Q 042142          107 VDYLTYGSADFSFAPYGPYWKFMKKLCMTQLLGGQTLNQFIPIRSEEIRRFMQLMLKKAKASEAVDVGKELIRLTNNVVS  186 (376)
Q Consensus       107 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vd~~~~~~~~~~dvi~  186 (376)
                      ...++.+..+.++..+|+.|+++||.+.+++++....+.+.+.+.++++.+++.+.+...+++++|+.+.+.++++|+|+
T Consensus       134 ~~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~  213 (543)
T PLN02971        134 QKILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMVKNSEPVDLRFVTRHYCGNAIK  213 (543)
T ss_pred             hhhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceehHHHHHHHHHHHHH
Confidence            33333332235677789999999999877778777777788888888888888877654556789999999999999999


Q ss_pred             HHHhCcccCCC-----chhHHHHHHHHHHHHhhhc---CccccchhhhhhhhcccchhHHHHHHHHHHHHHHHHHHHHHH
Q 042142          187 RMTMGQICSNN-----DKEADEVRKLVQETAELTG---KFNLQDYIWFCKNIDLQGFGKRLKEVRRKFDNMMERIIKEHQ  258 (376)
Q Consensus       187 ~~~fg~~~~~~-----~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  258 (376)
                      +++||.++...     +....+....++.......   .....+++|++++++..+..+...+..+.+.+++..++++++
T Consensus       214 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  293 (543)
T PLN02971        214 RLMFGTRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLDLNGHEKIMRESSAIMDKYHDPIIDERI  293 (543)
T ss_pred             HHHhCCcccccccccccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhcccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999876321     1111122222333222111   112234445444432223344455556677888888887765


Q ss_pred             HHHHhhhccCCCCCcccHHHHHhcccccCcccccCCHHHHHHHHHHHhhcCCcchHHHHHHHHHHHhhChHHHHHHHHHH
Q 042142          259 EARKINKERGKDYAPMDLLDMLLDISEDESSEIKLTRENIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEI  338 (376)
Q Consensus       259 ~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~aG~dTTa~~l~~~l~~L~~~P~v~~~l~~Ei  338 (376)
                      +..+.   +. .....|+++.+++...++ ....++++++.+++.++++||+||||++++|++++|++||++|+|+|+||
T Consensus       294 ~~~~~---~~-~~~~~d~l~~ll~~~~~~-~~~~ls~~~i~~~~~~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~EI  368 (543)
T PLN02971        294 KMWRE---GK-RTQIEDFLDIFISIKDEA-GQPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMINKPEILHKAMEEI  368 (543)
T ss_pred             HHHhc---cC-CCCCcCHHHHHHhhhccc-CCCCCCHHHHHHhHHHHheeccchHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence            43321   11 112369999999753221 12248999999999999999999999999999999999999999999999


Q ss_pred             hhhhCCCCCCCcccCCCChhHHHHHHHHhccCCCCCC
Q 042142          339 DSVVGKSRLVEESDIINLPYLQALVKETLRLHPTGPM  375 (376)
Q Consensus       339 ~~v~~~~~~~~~~~l~~lpyl~avikEtlRl~p~~p~  375 (376)
                      ++++|+++.++++|+.+|||++|||+|+||+||++|.
T Consensus       369 ~~v~g~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~  405 (543)
T PLN02971        369 DRVVGKERFVQESDIPKLNYVKAIIREAFRLHPVAAF  405 (543)
T ss_pred             HHHhCCCCCCCHHHhccCHHHHHHHHHHHhcCCCccc
Confidence            9999987889999999999999999999999999986


No 3  
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=5.2e-54  Score=407.93  Aligned_cols=346  Identities=36%  Similarity=0.626  Sum_probs=266.3

Q ss_pred             HHHhcCCCCCCCCCCCCCCccccccccCC-CchHHHHHHHHhcCCeEEEecCCccEEEccCHHHHHHHHHhCCccccCCC
Q 042142           24 IFRRSKITSSLPPSPMALPIIGHLHLLAP-IPHQALHKLSIRYGPLIHLFLGSVPCIVACSPETAKEILKTHETSFCDRP  102 (376)
Q Consensus        24 ~~~~~~~~~~~ppgp~~~p~lG~~~~~~~-~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~dp~~~~~il~~~~~~f~~~~  102 (376)
                      +++..+++.+.||||.++|++||++.+.. +++..+.+++++||++|++++|+.++|+++||+++++|+.++...|.+++
T Consensus        19 ~~~~~~~~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~~~~~f~~r~   98 (499)
T PLN03234         19 LRSTTKKSLRLPPGPKGLPIIGNLHQMEKFNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARP   98 (499)
T ss_pred             HHHhcCCCCCCCcCCCCCCeeccHHhcCCCCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHhCCccccCCC
Confidence            44444556678999999999999988854 68889999999999999999999999999999999999998877888776


Q ss_pred             CcccccccccCCceeEeccCChhHHHHHHHHHhhcCchhhhhhhhhhHHHHHHHHHHHHHHhhcCCCceehHHHHHHHHH
Q 042142          103 ISATVDYLTYGSADFSFAPYGPYWKFMKKLCMTQLLGGQTLNQFIPIRSEEIRRFMQLMLKKAKASEAVDVGKELIRLTN  182 (376)
Q Consensus       103 ~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vd~~~~~~~~~~  182 (376)
                      ...........+.++.+...++.|+++||.++.++|+.+++..+.+.++++++++++.+.+...+++++|+.+.+..+++
T Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~~vd~~~~~~~~t~  178 (499)
T PLN03234         99 LLKGQQTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQSGTVDLSELLLSFTN  178 (499)
T ss_pred             CchhhhhhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHHHHHHHHHHHHhccCCCeEEHHHHHHHHHH
Confidence            43222221111122234556889999999876789999999999999999999999999876556678999999999999


Q ss_pred             HHHHHHHhCcccCCCchhHHHHHHHHHHHHhhhcCccccchhhhhhhh-cccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 042142          183 NVVSRMTMGQICSNNDKEADEVRKLVQETAELTGKFNLQDYIWFCKNI-DLQGFGKRLKEVRRKFDNMMERIIKEHQEAR  261 (376)
Q Consensus       183 dvi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  261 (376)
                      |+|+.++||.+++....+..++.+.+.+.............+|++..+ .+.+..+++.++.+.+.+++..+++++.+..
T Consensus       179 dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  258 (499)
T PLN03234        179 CVVCRQAFGKRYNEYGTEMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQELLDETLDPN  258 (499)
T ss_pred             HHHHHHHhCCcccccchhHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            999999999987754333344444444433222222222333433322 1223345566777788888888887754332


Q ss_pred             HhhhccCCCCCcccHHHHHhcccccCcccccCCHHHHHHHHHHHhhcCCcchHHHHHHHHHHHhhChHHHHHHHHHHhhh
Q 042142          262 KINKERGKDYAPMDLLDMLLDISEDESSEIKLTRENIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEIDSV  341 (376)
Q Consensus       262 ~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~aG~dTTa~~l~~~l~~L~~~P~v~~~l~~Ei~~v  341 (376)
                      .   ..   ....|+++.+++..+++.....+++++|.+++.++++||+||||++++|++++|++||++|+|+|+|++++
T Consensus       259 ~---~~---~~~~d~l~~l~~~~~~~~~~~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~Ei~~~  332 (499)
T PLN03234        259 R---PK---QETESFIDLLMQIYKDQPFSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRNV  332 (499)
T ss_pred             c---cC---CCcccHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence            1   11   12468999888653322122358999999999999999999999999999999999999999999999999


Q ss_pred             hCCCCCCCcccCCCChhHHHHHHHHhccCCCCCC
Q 042142          342 VGKSRLVEESDIINLPYLQALVKETLRLHPTGPM  375 (376)
Q Consensus       342 ~~~~~~~~~~~l~~lpyl~avikEtlRl~p~~p~  375 (376)
                      +|+.+.++++|+++|||++|||+|+||++||+|+
T Consensus       333 ~~~~~~~~~~~l~~l~yl~avi~E~lRl~p~~~~  366 (499)
T PLN03234        333 IGDKGYVSEEDIPNLPYLKAVIKESLRLEPVIPI  366 (499)
T ss_pred             hCCCCCCCHHHHhcChHHHHHHHHHhccCCCccc
Confidence            9877778999999999999999999999999986


No 4  
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=1.1e-53  Score=407.01  Aligned_cols=349  Identities=38%  Similarity=0.654  Sum_probs=269.7

Q ss_pred             HHHHhcCCCCCCCCCCCCCCccccccccCCCchHHHHHHHHhcCCeEEEecCCccEEEccCHHHHHHHHHhCCccccCCC
Q 042142           23 SIFRRSKITSSLPPSPMALPIIGHLHLLAPIPHQALHKLSIRYGPLIHLFLGSVPCIVACSPETAKEILKTHETSFCDRP  102 (376)
Q Consensus        23 ~~~~~~~~~~~~ppgp~~~p~lG~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~dp~~~~~il~~~~~~f~~~~  102 (376)
                      +..++++++.+.||||.++|++||++.+..+++..+.+++++||++|++++|+.++|+++||+++++++.++...|.+++
T Consensus        22 ~~~~~~~~~~~~ppgp~~~pl~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dpe~~~~vl~~~~~~f~~~~  101 (514)
T PLN03112         22 WLNASMRKSLRLPPGPPRWPIVGNLLQLGPLPHRDLASLCKKYGPLVYLRLGSVDAITTDDPELIREILLRQDDVFASRP  101 (514)
T ss_pred             HccccccCCCCCccCCCCCCeeeeHHhcCCchHHHHHHHHHHhCCeEEEEecCccEEEECCHHHHHHHHHhCCcccccCC
Confidence            33444566678899999999999998887778899999999999999999999999999999999999998878888776


Q ss_pred             CcccccccccCCceeEeccCChhHHHHHHHHHhhcCchhhhhhhhhhHHHHHHHHHHHHHHhhcCCCceehHHHHHHHHH
Q 042142          103 ISATVDYLTYGSADFSFAPYGPYWKFMKKLCMTQLLGGQTLNQFIPIRSEEIRRFMQLMLKKAKASEAVDVGKELIRLTN  182 (376)
Q Consensus       103 ~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vd~~~~~~~~~~  182 (376)
                      ..........|..+.++..+|+.|+.+||.++.++|+.+.++.+.+.+.++++.+++.+.+...+++++|+.+.+..+++
T Consensus       102 ~~~~~~~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~l~~~~~~~~~vd~~~~~~~~~~  181 (514)
T PLN03112        102 RTLAAVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQDVWEAAQTGKPVNLREVLGAFSM  181 (514)
T ss_pred             CcccceeeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHHHHHhhccCCeeeHHHHHHHHHH
Confidence            54322222223223456678999999999977778999999999999999999999988765445678999999999999


Q ss_pred             HHHHHHHhCcccCCCc----hhHHHHHHHHHHHHhhhcCccccchhhhhhhhcccchhHHHHHHHHHHHHHHHHHHHHHH
Q 042142          183 NVVSRMTMGQICSNND----KEADEVRKLVQETAELTGKFNLQDYIWFCKNIDLQGFGKRLKEVRRKFDNMMERIIKEHQ  258 (376)
Q Consensus       183 dvi~~~~fg~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  258 (376)
                      |+|+.++||.++....    ....++.+.+..............++|+++++...+..+++.+..+.+.+++..++++++
T Consensus       182 ~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  261 (514)
T PLN03112        182 NNVTRMLLGKQYFGAESAGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDPYGCEKKMREVEKRVDEFHDKIIDEHR  261 (514)
T ss_pred             HHHHHHHcCCccccccccchHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999864321    223445555554433322222233445444332223345566667778888888887765


Q ss_pred             HHHHhhhccCCCCCcccHHHHHhcccccCcccccCCHHHHHHHHHHHhhcCCcchHHHHHHHHHHHhhChHHHHHHHHHH
Q 042142          259 EARKINKERGKDYAPMDLLDMLLDISEDESSEIKLTRENIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEI  338 (376)
Q Consensus       259 ~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~aG~dTTa~~l~~~l~~L~~~P~v~~~l~~Ei  338 (376)
                      +..+.   ........|+++.+++...++ ....++++++.+++.++++||+||||++++|++++|++||++|+|+|+||
T Consensus       262 ~~~~~---~~~~~~~~d~l~~ll~~~~~~-~~~~l~~~~i~~~~~~~~~AG~dTTa~~l~~~l~~L~~~P~vq~kl~~Ei  337 (514)
T PLN03112        262 RARSG---KLPGGKDMDFVDVLLSLPGEN-GKEHMDDVEIKALMQDMIAAATDTSAVTNEWAMAEVIKNPRVLRKIQEEL  337 (514)
T ss_pred             Hhhcc---cccCCccchHHHHHHHhhccc-cccCCCHHHHHHHHHHHhccccccHHHHHHHHHHHHHhChHHHHHHHHHH
Confidence            54321   110112459999999753221 22258999999999999999999999999999999999999999999999


Q ss_pred             hhhhCCCCCCCcccCCCChhHHHHHHHHhccCCCCCC
Q 042142          339 DSVVGKSRLVEESDIINLPYLQALVKETLRLHPTGPM  375 (376)
Q Consensus       339 ~~v~~~~~~~~~~~l~~lpyl~avikEtlRl~p~~p~  375 (376)
                      ++++|+.+.++++++++|||++|||+||||+||++|+
T Consensus       338 ~~~~~~~~~~t~~~l~~L~yl~avi~EtlRl~p~~~~  374 (514)
T PLN03112        338 DSVVGRNRMVQESDLVHLNYLRCVVRETFRMHPAGPF  374 (514)
T ss_pred             HHhcCCCCcCChhhhccCcHHHHHHHHHhccCCCccc
Confidence            9999877778999999999999999999999999985


No 5  
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=1.3e-53  Score=406.00  Aligned_cols=340  Identities=39%  Similarity=0.724  Sum_probs=266.0

Q ss_pred             CCCCCCCCCCCCCccccccccCCCchHHHHHHHHhcCCeEEEecCCccEEEccCHHHHHHHHHhCCccccCCCCcccccc
Q 042142           30 ITSSLPPSPMALPIIGHLHLLAPIPHQALHKLSIRYGPLIHLFLGSVPCIVACSPETAKEILKTHETSFCDRPISATVDY  109 (376)
Q Consensus        30 ~~~~~ppgp~~~p~lG~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~dp~~~~~il~~~~~~f~~~~~~~~~~~  109 (376)
                      ++.++||||.++|++||++.+..+++..+.+++++||++|++++|+.++|+++||+++++++.++...|.+++.......
T Consensus        31 ~~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~r~~~~~~~~  110 (517)
T PLN02687         31 HKRPLPPGPRGWPVLGNLPQLGPKPHHTMAALAKTYGPLFRLRFGFVDVVVAASASVAAQFLRTHDANFSNRPPNSGAEH  110 (517)
T ss_pred             CCCCCCccCCCCCccccHHhcCCchhHHHHHHHHHhCCeeEEecCCceEEEeCCHHHHHHHHHhcchhhhcCCCccchhh
Confidence            34568999999999999988877789999999999999999999999999999999999999988778887765433333


Q ss_pred             cccCCceeEeccCChhHHHHHHHHHhhcCchhhhhhhhhhHHHHHHHHHHHHHHhhcCCCceehHHHHHHHHHHHHHHHH
Q 042142          110 LTYGSADFSFAPYGPYWKFMKKLCMTQLLGGQTLNQFIPIRSEEIRRFMQLMLKKAKASEAVDVGKELIRLTNNVVSRMT  189 (376)
Q Consensus       110 ~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~  189 (376)
                      +.....+.++..+|+.|+++||.+.+++|+.++++.+.+.+.+++.++++.+.+. .+++++|+.+.+..+++|+|+.++
T Consensus       111 ~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~-~~~~~vd~~~~~~~~t~dvi~~~~  189 (517)
T PLN02687        111 MAYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVALLVRELARQ-HGTAPVNLGQLVNVCTTNALGRAM  189 (517)
T ss_pred             hccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHh-cCCCceeHHHHHHHHHHHHHHHHH
Confidence            3222235567778999999999986578999999999999999999999999764 245789999999999999999999


Q ss_pred             hCcccCCCc--hhHHHHHHHHHHHHhhhcCccccchhhhhhhhcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 042142          190 MGQICSNND--KEADEVRKLVQETAELTGKFNLQDYIWFCKNIDLQGFGKRLKEVRRKFDNMMERIIKEHQEARKINKER  267 (376)
Q Consensus       190 fg~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  267 (376)
                      ||.++...+  .....+.+.+.......+......++|+++++..+...++..+..+.+.+++..+++++++..+.   .
T Consensus       190 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~---~  266 (517)
T PLN02687        190 VGRRVFAGDGDEKAREFKEMVVELMQLAGVFNVGDFVPALRWLDLQGVVGKMKRLHRRFDAMMNGIIEEHKAAGQT---G  266 (517)
T ss_pred             hCccccccCCcchHHHHHHHHHHHHHHhccCcHHHHhhhHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHHhccc---c
Confidence            999865322  23345555555554333322222344544443222333445556667777888888776543211   1


Q ss_pred             CCCCCcccHHHHHhcccccC---cccccCCHHHHHHHHHHHhhcCCcchHHHHHHHHHHHhhChHHHHHHHHHHhhhhCC
Q 042142          268 GKDYAPMDLLDMLLDISEDE---SSEIKLTRENIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEIDSVVGK  344 (376)
Q Consensus       268 ~~~~~~~dll~~ll~~~~~~---~~~~~l~~~~l~~~~~~~~~aG~dTTa~~l~~~l~~L~~~P~v~~~l~~Ei~~v~~~  344 (376)
                        +....|+++.+++...++   .++..++++++.+++.++++||+||||++++|++++|++||++|+|+++||+++.++
T Consensus       267 --~~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~eTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~  344 (517)
T PLN02687        267 --SEEHKDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGTDTTSSTVEWAIAELIRHPDILKKAQEELDAVVGR  344 (517)
T ss_pred             --CcccccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhccccCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCC
Confidence              112469999999753321   122358999999999999999999999999999999999999999999999999987


Q ss_pred             CCCCCcccCCCChhHHHHHHHHhccCCCCCC
Q 042142          345 SRLVEESDIINLPYLQALVKETLRLHPTGPM  375 (376)
Q Consensus       345 ~~~~~~~~l~~lpyl~avikEtlRl~p~~p~  375 (376)
                      ++.++++++.+||||+|||+||||++|++|.
T Consensus       345 ~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~  375 (517)
T PLN02687        345 DRLVSESDLPQLTYLQAVIKETFRLHPSTPL  375 (517)
T ss_pred             CCCCCHHHhhhCHHHHHHHHHHHccCCCccc
Confidence            7778999999999999999999999999985


No 6  
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=5e-53  Score=399.81  Aligned_cols=341  Identities=37%  Similarity=0.694  Sum_probs=265.7

Q ss_pred             cCCCCCCCCCCCCCCccccccccCCCchHHHHHHHHhcCCeEEEecCCccEEEccCHHHHHHHHHhCCccccCCCCcccc
Q 042142           28 SKITSSLPPSPMALPIIGHLHLLAPIPHQALHKLSIRYGPLIHLFLGSVPCIVACSPETAKEILKTHETSFCDRPISATV  107 (376)
Q Consensus        28 ~~~~~~~ppgp~~~p~lG~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~dp~~~~~il~~~~~~f~~~~~~~~~  107 (376)
                      ...+.++||||.++|++|+++.+..+++..+.+++++||+++++++|+.++|+++||+++++++.++...|.+++.....
T Consensus        26 ~~~~~~~pPgp~~~Pl~G~l~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~vl~~~~~~f~~r~~~~~~  105 (504)
T PLN00110         26 PKPSRKLPPGPRGWPLLGALPLLGNMPHVALAKMAKRYGPVMFLKMGTNSMVVASTPEAARAFLKTLDINFSNRPPNAGA  105 (504)
T ss_pred             hcccCCCcccCCCCCeeechhhcCCchHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcchhhcCCCCccch
Confidence            45567889999999999999877767889999999999999999999999999999999999999887788887654322


Q ss_pred             cccccCCceeEeccCChhHHHHHHHHHhhcCchhhhhhhhhhHHHHHHHHHHHHHHhhcCCCceehHHHHHHHHHHHHHH
Q 042142          108 DYLTYGSADFSFAPYGPYWKFMKKLCMTQLLGGQTLNQFIPIRSEEIRRFMQLMLKKAKASEAVDVGKELIRLTNNVVSR  187 (376)
Q Consensus       108 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~  187 (376)
                      .....+..+.++..+|+.|+++|+.+..++|+.+.++.+.+.+.+++..+++.+.+....++++|+.+++..+++|+|+.
T Consensus       106 ~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~vi~~  185 (504)
T PLN00110        106 THLAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAMLELSQRGEPVVVPEMLTFSMANMIGQ  185 (504)
T ss_pred             hhhccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHHHhccCCCcEeHHHHHHHHHHHHHHH
Confidence            22222323456777899999999998766899999999999999999999999877555677899999999999999999


Q ss_pred             HHhCcccC-CCchhHHHHHHHHHHHHhhhcCccccchhhhhhhhcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 042142          188 MTMGQICS-NNDKEADEVRKLVQETAELTGKFNLQDYIWFCKNIDLQGFGKRLKEVRRKFDNMMERIIKEHQEARKINKE  266 (376)
Q Consensus       188 ~~fg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  266 (376)
                      ++||.++. ..+....++...+..............++|++.++...+..+...+..+.+.+++...++++++..+.  .
T Consensus       186 ~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~  263 (504)
T PLN00110        186 VILSRRVFETKGSESNEFKDMVVELMTTAGYFNIGDFIPSIAWMDIQGIERGMKHLHKKFDKLLTRMIEEHTASAHE--R  263 (504)
T ss_pred             HHhCCcccccCchhHHHHHHHHHHHHHHhccccHHHHcchHhhhCcchHHHHHHHHHHHHHHHHHHHHHHHHhhccc--c
Confidence            99998762 22223345555555544332222223344444333222334555556667777777777665443211  1


Q ss_pred             cCCCCCcccHHHHHhcccccCcccccCCHHHHHHHHHHHhhcCCcchHHHHHHHHHHHhhChHHHHHHHHHHhhhhCCCC
Q 042142          267 RGKDYAPMDLLDMLLDISEDESSEIKLTRENIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEIDSVVGKSR  346 (376)
Q Consensus       267 ~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~aG~dTTa~~l~~~l~~L~~~P~v~~~l~~Ei~~v~~~~~  346 (376)
                      .    ...|+++.+++...++ ++..++++++.++++++++||+||||++++|++++|++||++|+|+++|+++++++++
T Consensus       264 ~----~~~d~l~~ll~~~~~~-~~~~l~~~~i~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~  338 (504)
T PLN00110        264 K----GNPDFLDVVMANQENS-TGEKLTLTNIKALLLNLFTAGTDTSSSVIEWSLAEMLKNPSILKRAHEEMDQVIGRNR  338 (504)
T ss_pred             c----cCCChhhHHhhccccc-CCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCC
Confidence            1    2358999999753221 2345899999999999999999999999999999999999999999999999998777


Q ss_pred             CCCcccCCCChhHHHHHHHHhccCCCCCC
Q 042142          347 LVEESDIINLPYLQALVKETLRLHPTGPM  375 (376)
Q Consensus       347 ~~~~~~l~~lpyl~avikEtlRl~p~~p~  375 (376)
                      .++++++++|||++|||+||||++|++|+
T Consensus       339 ~~~~~~~~~lpyl~avi~EtlRl~p~~~~  367 (504)
T PLN00110        339 RLVESDLPKLPYLQAICKESFRKHPSTPL  367 (504)
T ss_pred             CCCHHHhhcChHHHHHHHHHhcCCCCccc
Confidence            78999999999999999999999999986


No 7  
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=5.5e-53  Score=401.52  Aligned_cols=346  Identities=36%  Similarity=0.690  Sum_probs=262.6

Q ss_pred             HHhcCCCCCCCCCCCCCCccccccccCCCchHHHHHHHHhcCCeEEEecCCccEEEccCHHHHHHHHHhCCccccCCCCc
Q 042142           25 FRRSKITSSLPPSPMALPIIGHLHLLAPIPHQALHKLSIRYGPLIHLFLGSVPCIVACSPETAKEILKTHETSFCDRPIS  104 (376)
Q Consensus        25 ~~~~~~~~~~ppgp~~~p~lG~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~dp~~~~~il~~~~~~f~~~~~~  104 (376)
                      +++.+++.++||||.++|++|+++.+...++..+.+++++||++|++++|+.++|+++||+++++++.++...|..++..
T Consensus        28 ~~~~~~~~~~ppgp~~~Pl~G~l~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~  107 (516)
T PLN02183         28 ISRLRRRLPYPPGPKGLPIIGNMLMMDQLTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPAN  107 (516)
T ss_pred             HhhccCCCCCCcCCCCCCeeccHHhcCCcchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCcc
Confidence            34445556789999999999999877655678899999999999999999999999999999999999887788777653


Q ss_pred             ccccccccCCceeEeccCChhHHHHHHHHHhhcCchhhhhhhhhhHHHHHHHHHHHHHHhhcCCCceehHHHHHHHHHHH
Q 042142          105 ATVDYLTYGSADFSFAPYGPYWKFMKKLCMTQLLGGQTLNQFIPIRSEEIRRFMQLMLKKAKASEAVDVGKELIRLTNNV  184 (376)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vd~~~~~~~~~~dv  184 (376)
                      ........+..+.+++.+|+.|+++||.++.++|+.+.++.+.+. .++++.+++.+..  ..++++|+.+.+..+++|+
T Consensus       108 ~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~-~~~~~~~~~~l~~--~~~~~v~~~~~~~~~~~~v  184 (516)
T PLN02183        108 IAISYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWASV-RDEVDSMVRSVSS--NIGKPVNIGELIFTLTRNI  184 (516)
T ss_pred             cchhccccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHHH-HHHHHHHHHHHHh--cCCCcEeHHHHHHHHHHHH
Confidence            332222222234567778999999999976788999989888886 4678899999864  3467899999999999999


Q ss_pred             HHHHHhCcccCCCchhHHHHHHHHHHHHhhhcCccccchhhhhhhhcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 042142          185 VSRMTMGQICSNNDKEADEVRKLVQETAELTGKFNLQDYIWFCKNIDLQGFGKRLKEVRRKFDNMMERIIKEHQEARKIN  264 (376)
Q Consensus       185 i~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  264 (376)
                      ++.++||..++..   ..++.+.+..............++|+++++......+++.+..+.+.+++..+++++.+..+..
T Consensus       185 i~~~~fG~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  261 (516)
T PLN02183        185 TYRAAFGSSSNEG---QDEFIKILQEFSKLFGAFNVADFIPWLGWIDPQGLNKRLVKARKSLDGFIDDIIDDHIQKRKNQ  261 (516)
T ss_pred             HHhHhhcCcccch---HHHHHHHHHHHHHHhCCccHHHhcchhHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence            9999999876542   2344454444433333233334455554432222345566667778888888887765543221


Q ss_pred             hc-cCCCCCcccHHHHHhcccccC---------cccccCCHHHHHHHHHHHhhcCCcchHHHHHHHHHHHhhChHHHHHH
Q 042142          265 KE-RGKDYAPMDLLDMLLDISEDE---------SSEIKLTRENIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKA  334 (376)
Q Consensus       265 ~~-~~~~~~~~dll~~ll~~~~~~---------~~~~~l~~~~l~~~~~~~~~aG~dTTa~~l~~~l~~L~~~P~v~~~l  334 (376)
                      .. ...+....|+++.+++...++         .+...++++++.+++.++++||+||||++++|++++|++||++|+|+
T Consensus       262 ~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~La~~Pevq~kl  341 (516)
T PLN02183        262 NADNDSEEAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPEDLKRV  341 (516)
T ss_pred             ccccccccccccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHhCHHHHHHH
Confidence            00 000112358999998743211         01125899999999999999999999999999999999999999999


Q ss_pred             HHHHhhhhCCCCCCCcccCCCChhHHHHHHHHhccCCCCCCC
Q 042142          335 REEIDSVVGKSRLVEESDIINLPYLQALVKETLRLHPTGPMS  376 (376)
Q Consensus       335 ~~Ei~~v~~~~~~~~~~~l~~lpyl~avikEtlRl~p~~p~~  376 (376)
                      ++|+++++|.++.++.+++.+|||++|||+||||++||+|+.
T Consensus       342 ~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~  383 (516)
T PLN02183        342 QQELADVVGLNRRVEESDLEKLTYLKCTLKETLRLHPPIPLL  383 (516)
T ss_pred             HHHHHHHcCCCCCCCHHHhccChHHHHHHHHHhccCCCccce
Confidence            999999998666789999999999999999999999999863


No 8  
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=9.9e-53  Score=398.74  Aligned_cols=365  Identities=32%  Similarity=0.578  Sum_probs=267.8

Q ss_pred             CccchhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCcccccccc-CCCchHHHHHHHHhcCCeEEEecCCccEE
Q 042142            1 MVDFSGYIVLFLVWLVSTILVRSIFRRSKITSSLPPSPMALPIIGHLHLL-APIPHQALHKLSIRYGPLIHLFLGSVPCI   79 (376)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ppgp~~~p~lG~~~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~v   79 (376)
                      |+|++..++++++++++..    +.+.++++.++||||+++|++||++.+ ..+++..+.+++++||++|++++|+.++|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ppgp~~~p~~G~l~~l~~~~~~~~~~~~~~~yG~v~~~~~g~~~~v   76 (502)
T PLN02966          1 MEDIIIGVVALAAVLLFFL----YQKPKTKRYKLPPGPSPLPVIGNLLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMV   76 (502)
T ss_pred             CCceEEeHHHHHHHHHHHH----HhccccCCCCCCcCCCCCCeeccHHhcCCCChhHHHHHHHHHhCCeEEEecCCCcEE
Confidence            5666655555555533322    333456667889999999999999887 45688999999999999999999999999


Q ss_pred             EccCHHHHHHHHHhCCccccCCCCcccccccccCCceeEeccCChhHHHHHHHHHhhcCchhhhhhhhhhHHHHHHHHHH
Q 042142           80 VACSPETAKEILKTHETSFCDRPISATVDYLTYGSADFSFAPYGPYWKFMKKLCMTQLLGGQTLNQFIPIRSEEIRRFMQ  159 (376)
Q Consensus        80 ~i~dp~~~~~il~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  159 (376)
                      +++||+++++|+.++...|.+++..........+..+..+..+|+.|+.+|+.++.++|+.+.+..+.+.+.+++.++++
T Consensus        77 vi~~p~~i~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~l~~  156 (502)
T PLN02966         77 VISSAELAKELLKTQDVNFADRPPHRGHEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMD  156 (502)
T ss_pred             EECCHHHHHHHHHhCcccccCCCCCccceeeccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999998777777655332222222232233455679999999999667899999999999999999999999


Q ss_pred             HHHHhhcCCCceehHHHHHHHHHHHHHHHHhCcccCCCchhHHHHHHHHHHHHhhhcCccccchhhhhhhhc-ccchhHH
Q 042142          160 LMLKKAKASEAVDVGKELIRLTNNVVSRMTMGQICSNNDKEADEVRKLVQETAELTGKFNLQDYIWFCKNID-LQGFGKR  238 (376)
Q Consensus       160 ~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  238 (376)
                      .|.+....++++|+.+.+..+|+|+|+.++||.+++..+....++.+.+..............++|++..+. .+++.+.
T Consensus       157 ~l~~~~~~~~~vdl~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  236 (502)
T PLN02966        157 KINKAADKSEVVDISELMLTFTNSVVCRQAFGKKYNEDGEEMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAY  236 (502)
T ss_pred             HHHHhccCCCceeHHHHHHHHHHHHHHHHHhCCccCccchHHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHH
Confidence            998765556789999999999999999999999887543333444444444332322222233344332211 1222233


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccHHHHHhcccccCcccccCCHHHHHHHHHHHhhcCCcchHHHHH
Q 042142          239 LKEVRRKFDNMMERIIKEHQEARKINKERGKDYAPMDLLDMLLDISEDESSEIKLTRENIKAFILDIFAAGTDTSAITVE  318 (376)
Q Consensus       239 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~aG~dTTa~~l~  318 (376)
                      .....+...+++...++++.+....   .   ....|+++.+++..+++.....++++++.++++++++||+||||++++
T Consensus       237 ~~~~~~~~~~~~~~~i~~~~~~~~~---~---~~~~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~  310 (502)
T PLN02966        237 MKECFERQDTYIQEVVNETLDPKRV---K---PETESMIDLLMEIYKEQPFASEFTVDNVKAVILDIVVAGTDTAAAAVV  310 (502)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcccc---c---cccccHHHHHHHHHhccCcCCCCCHHHHHHHHHHHHhccccchHHHHH
Confidence            3334445556666666554322110   1   023589999886543221123589999999999999999999999999


Q ss_pred             HHHHHHhhChHHHHHHHHHHhhhhCCC--CCCCcccCCCChhHHHHHHHHhccCCCCCC
Q 042142          319 WALAELINHPDMMKKAREEIDSVVGKS--RLVEESDIINLPYLQALVKETLRLHPTGPM  375 (376)
Q Consensus       319 ~~l~~L~~~P~v~~~l~~Ei~~v~~~~--~~~~~~~l~~lpyl~avikEtlRl~p~~p~  375 (376)
                      |++|+|++||++|+|+++||+++++++  +.++++|+++|||++|||+|+||++|++|.
T Consensus       311 ~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~  369 (502)
T PLN02966        311 WGMTYLMKYPQVLKKAQAEVREYMKEKGSTFVTEDDVKNLPYFRALVKETLRIEPVIPL  369 (502)
T ss_pred             HHHHHHHhCHHHHHHHHHHHHHHhcccCCCcCCHhhccCCcHHHHHHHHHhccCCCccc
Confidence            999999999999999999999998742  357899999999999999999999999985


No 9  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.2e-51  Score=375.45  Aligned_cols=330  Identities=26%  Similarity=0.364  Sum_probs=242.4

Q ss_pred             CCCCCCCCCccccccccC--CCchHHHHHHHHhcCCeEEEecCCccEEEccCHHHHHHHHHhCCccccCCCCcccccccc
Q 042142           34 LPPSPMALPIIGHLHLLA--PIPHQALHKLSIRYGPLIHLFLGSVPCIVACSPETAKEILKTHETSFCDRPISATVDYLT  111 (376)
Q Consensus        34 ~ppgp~~~p~lG~~~~~~--~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~dp~~~~~il~~~~~~f~~~~~~~~~~~~~  111 (376)
                      -.|+|+++|++||+..+.  +.+.....+.+.+|||++.++.|.+|.++|+|||++++|+.++.++|.+|......+...
T Consensus        32 Gi~~~~p~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~~~p~l~v~D~elik~I~ik~F~~F~~r~~~~~~d~~~  111 (499)
T KOG0158|consen   32 GIPGPKPLPFLGNLPGMLKRERPGDLLLDIYTKYRPVVGIYEGRQPALLVSDPELIKEILIKDFDNFYNRKRPIYGDPED  111 (499)
T ss_pred             CCCCCCCCCcEecHHHHHhccCcHHHHHHHHhcCCCEEEEEecCCcceEecCHHHHHHHHHHhCccCcCCCCCCcCCCCC
Confidence            567888899999998763  334555555555669999999999999999999999999999999999854111111110


Q ss_pred             cCCceeEeccCChhHHHHHHHHHhhcCchhhhhhhhhhHHHHHHHHHHHHHHhhcCCCceehHHHHHHHHHHHHHHHHhC
Q 042142          112 YGSADFSFAPYGPYWKFMKKLCMTQLLGGQTLNQFIPIRSEEIRRFMQLMLKKAKASEAVDVGKELIRLTNNVVSRMTMG  191 (376)
Q Consensus       112 ~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~fg  191 (376)
                      .-....+|...|+.||++|..+ +|.|+..+++.+.|.|++++.++++.+.++...+..+++.+.+.++|.|||++++||
T Consensus       112 ~l~~~~Lf~~~g~~WK~lR~~l-sP~Fts~kmk~m~~t~~~~~~~l~~~l~~~~~~~~~~~~~dl~~~yT~DVI~~~AfG  190 (499)
T KOG0158|consen  112 PLSALNLFFLRGERWKRLRTKL-SPTFTSGKLKKMFPTMEEVGDELVRHLRRKSEGGQEGEIKDLCARYTTDVIGSCAFG  190 (499)
T ss_pred             cccccCchhccCchHHHHHHhh-ccccchhhHHHHHHHHHHHHHHHHHHHHHhhcccCCccHHHHHHHHHHHHHhHhhcc
Confidence            0011346777899999999996 699999999999999999999999999986554457899999999999999999999


Q ss_pred             cccCCCchhHHHHHHHHHHHHhh-hcCccc----cchhhhhhhhcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 042142          192 QICSNNDKEADEVRKLVQETAEL-TGKFNL----QDYIWFCKNIDLQGFGKRLKEVRRKFDNMMERIIKEHQEARKINKE  266 (376)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  266 (376)
                      .+.+.......++..+....... ...+.+    .-.+|.+... + .    .........+++.+++.++.+.++.  +
T Consensus       191 ~~~~s~~d~~~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~-l-~----~~~~~~~~~~~~~~~v~~~v~~R~~--~  262 (499)
T KOG0158|consen  191 LDANSLRDPKAEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALP-L-R----VKLFPEDVTDFFRKLVNSRVEQREK--E  262 (499)
T ss_pred             cchhhhcCchHHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHh-h-h----cccChHHHHHHHHHHHHHHHHHHHh--c
Confidence            98776554445555544433322 111111    1111111110 0 0    1111223334444444444333321  1


Q ss_pred             cCCCCCcccHHHHHhcccccC--c--ccccCCHHHHHHHHHHHhhcCCcchHHHHHHHHHHHhhChHHHHHHHHHHhhhh
Q 042142          267 RGKDYAPMDLLDMLLDISEDE--S--SEIKLTRENIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEIDSVV  342 (376)
Q Consensus       267 ~~~~~~~~dll~~ll~~~~~~--~--~~~~l~~~~l~~~~~~~~~aG~dTTa~~l~~~l~~L~~~P~v~~~l~~Ei~~v~  342 (376)
                      +.   .+.|+++.+++..+++  +  ..+.++.++|+.+|+.+++||.||||+||++++|+||+||++|+||||||+++.
T Consensus       263 ~~---~r~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeTts~tlsf~lYeLA~~PdvQ~kLreEI~~~~  339 (499)
T KOG0158|consen  263 NI---ERNDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFETTASTLSFALYELAKNPDVQDKLREEIDEVL  339 (499)
T ss_pred             CC---CCchHHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhcChHHHHHHHHHHHHHh
Confidence            21   4679999999875421  1  112599999999999999999999999999999999999999999999999997


Q ss_pred             CCCCCCCcccCCCChhHHHHHHHHhccCCCCCC
Q 042142          343 GKSRLVEESDIINLPYLQALVKETLRLHPTGPM  375 (376)
Q Consensus       343 ~~~~~~~~~~l~~lpyl~avikEtlRl~p~~p~  375 (376)
                      .+...+++|.+++|+||++||+||||+||++|.
T Consensus       340 ~~~~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~  372 (499)
T KOG0158|consen  340 EEKEGLTYDSLSKLKYLDMVIKETLRLYPPAPF  372 (499)
T ss_pred             cccCCCCHHHHhCCcHHHHHHHHHHhhCCCccc
Confidence            765559999999999999999999999999986


No 10 
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=8.4e-51  Score=386.83  Aligned_cols=345  Identities=24%  Similarity=0.392  Sum_probs=255.1

Q ss_pred             CCCCCCCCCCCCCCccccccccC---CCchHHHHHHHHhcCCeEEEecCCccEEEccCHHHHHHHHHhCCccccCCCCcc
Q 042142           29 KITSSLPPSPMALPIIGHLHLLA---PIPHQALHKLSIRYGPLIHLFLGSVPCIVACSPETAKEILKTHETSFCDRPISA  105 (376)
Q Consensus        29 ~~~~~~ppgp~~~p~lG~~~~~~---~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~dp~~~~~il~~~~~~f~~~~~~~  105 (376)
                      +...++||||+++|++||++.+.   .+++..+.+++++||++|++++|+.+.|+++||+++++++.++...|.+++...
T Consensus        31 ~~~~~lpPgp~~~pl~G~l~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~~~  110 (519)
T PLN00168         31 KKGRRLPPGPPAVPLLGSLVWLTNSSADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALVERGAALADRPAVA  110 (519)
T ss_pred             CCCCCCCcCCCCCcccccHHhhccccccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcCCccccCCccc
Confidence            34467899999999999987653   346788999999999999999999999999999999999998888888776543


Q ss_pred             cccccccCCceeEeccCChhHHHHHHHHHhhcCchhhhhhhhhhHHHHHHHHHHHHHHhhcCCCceehHHHHHHHHHHHH
Q 042142          106 TVDYLTYGSADFSFAPYGPYWKFMKKLCMTQLLGGQTLNQFIPIRSEEIRRFMQLMLKKAKASEAVDVGKELIRLTNNVV  185 (376)
Q Consensus       106 ~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vd~~~~~~~~~~dvi  185 (376)
                      ....++.+.....+..+|+.|+++||.++.++|+.+.++.+.+.+.++++++++.+.+....+.++|+.+.+..+++++|
T Consensus       111 ~~~~~~~~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~~~~~~~~ii  190 (519)
T PLN00168        111 SSRLLGESDNTITRSSYGPVWRLLRRNLVAETLHPSRVRLFAPARAWVRRVLVDKLRREAEDAAAPRVVETFQYAMFCLL  190 (519)
T ss_pred             chhhhccCCCceeCCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHH
Confidence            32333222112222367999999998767899999999999999999999999999875444557899999999999999


Q ss_pred             HHHHhCcccCCCchhHHHHHHHHHHHHhhhc-CccccchhhhhhhhcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 042142          186 SRMTMGQICSNNDKEADEVRKLVQETAELTG-KFNLQDYIWFCKNIDLQGFGKRLKEVRRKFDNMMERIIKEHQEARKIN  264 (376)
Q Consensus       186 ~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  264 (376)
                      +.++||.+++..  ....+............ ......++|++......+..++..+..+.+.+++..+++++++.....
T Consensus       191 ~~~~fG~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  268 (519)
T PLN00168        191 VLMCFGERLDEP--AVRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHLFRGRLQKALALRRRQKELFVPLIDARREYKNHL  268 (519)
T ss_pred             HHHHcCCCcChh--hHHHHHHHHHHHHHHhcCCCCHHHhCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence            999999887632  11223232222211111 122223334322111111123344556677888888888766542110


Q ss_pred             hc-c-CC---CCCcccHHHHHhcccccCcccccCCHHHHHHHHHHHhhcCCcchHHHHHHHHHHHhhChHHHHHHHHHHh
Q 042142          265 KE-R-GK---DYAPMDLLDMLLDISEDESSEIKLTRENIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEID  339 (376)
Q Consensus       265 ~~-~-~~---~~~~~dll~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~aG~dTTa~~l~~~l~~L~~~P~v~~~l~~Ei~  339 (376)
                      .+ + ..   .....|+++.+++....+.++..++++++.+++.++++||+||||++++|++++|++||++|+|+++||+
T Consensus       269 ~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~lt~~~i~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~q~kl~~Ei~  348 (519)
T PLN00168        269 GQGGEPPKKETTFEHSYVDTLLDIRLPEDGDRALTDDEIVNLCSEFLNAGTDTTSTALQWIMAELVKNPSIQSKLHDEIK  348 (519)
T ss_pred             cccCccccccccccccHHHHHHhhhccccccCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence            00 0 00   0014589999987532222234699999999999999999999999999999999999999999999999


Q ss_pred             hhhCCC-CCCCcccCCCChhHHHHHHHHhccCCCCCC
Q 042142          340 SVVGKS-RLVEESDIINLPYLQALVKETLRLHPTGPM  375 (376)
Q Consensus       340 ~v~~~~-~~~~~~~l~~lpyl~avikEtlRl~p~~p~  375 (376)
                      ++++++ +.++++++.+||||+|||+||||+||++|+
T Consensus       349 ~v~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~  385 (519)
T PLN00168        349 AKTGDDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHF  385 (519)
T ss_pred             HHhCCCCCCCCHHHhhCChHHHHHHHHHhhcCCCCcc
Confidence            999853 568999999999999999999999999975


No 11 
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=3.3e-50  Score=382.29  Aligned_cols=342  Identities=28%  Similarity=0.451  Sum_probs=248.0

Q ss_pred             cCCCCCCCCCCCCCCccccccccCCC-chHHHHHHHHhcCCeEEEecCCccEEEccCHHHHHHHHHhCCccccCCCCccc
Q 042142           28 SKITSSLPPSPMALPIIGHLHLLAPI-PHQALHKLSIRYGPLIHLFLGSVPCIVACSPETAKEILKTHETSFCDRPISAT  106 (376)
Q Consensus        28 ~~~~~~~ppgp~~~p~lG~~~~~~~~-~~~~~~~~~~~yG~i~~~~~g~~~~v~i~dp~~~~~il~~~~~~f~~~~~~~~  106 (376)
                      ..++.+.||||+++|++|+++.+..+ .+..+.+++++||++|++++|+.++|+++||+++++++.+++..|.+++....
T Consensus        25 ~~~~~~~pPgp~~~p~~g~l~~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~~~~  104 (503)
T PLN02394         25 RGKKLKLPPGPAAVPIFGNWLQVGDDLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVV  104 (503)
T ss_pred             hcCcCCCCcCCCCCCeeeeHHhcCCCchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCCCcch
Confidence            44556789999999999999887544 57889999999999999999999999999999999999987777876654333


Q ss_pred             ccccccCCceeEeccCChhHHHHHHHHHhhcCchhhhhhhhhhHHHHHHHHHHHHHHhhc-CCCceehHHHHHHHHHHHH
Q 042142          107 VDYLTYGSADFSFAPYGPYWKFMKKLCMTQLLGGQTLNQFIPIRSEEIRRFMQLMLKKAK-ASEAVDVGKELIRLTNNVV  185 (376)
Q Consensus       107 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~-~~~~vd~~~~~~~~~~dvi  185 (376)
                      .......+.+.++..+|+.|+++||.+..++|+.+.++.+.+.++++++++++.+.+... .++.+|+.+.+..+++|++
T Consensus       105 ~~~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~lv~~l~~~~~~~~~~v~~~~~~~~~~~dvi  184 (503)
T PLN02394        105 FDIFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRANPEAATEGVVIRRRLQLMMYNIM  184 (503)
T ss_pred             HhHhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHHHHHHHHhhhccCCcEecHHHHHHHHHHHH
Confidence            333322222456677899999999997668899999999999999999999999976532 2456999999999999999


Q ss_pred             HHHHhCcccCCCch-hHHHHHHHHHHHHhhhcCc--cccchhhhhhhhcccchhHHHHHHHHHHHH-HHHHHHHHHHHHH
Q 042142          186 SRMTMGQICSNNDK-EADEVRKLVQETAELTGKF--NLQDYIWFCKNIDLQGFGKRLKEVRRKFDN-MMERIIKEHQEAR  261 (376)
Q Consensus       186 ~~~~fg~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~  261 (376)
                      +.++||.+++..+. ....+.............+  ....++|++... ...+.+...+....... +...+++++++..
T Consensus       185 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  263 (503)
T PLN02394        185 YRMMFDRRFESEDDPLFLKLKALNGERSRLAQSFEYNYGDFIPILRPF-LRGYLKICQDVKERRLALFKDYFVDERKKLM  263 (503)
T ss_pred             HHHHhCCCcccccchhHHHHHHHHHHHHHHhcccccchhhhchHHHHH-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999998864321 1122222222221111111  112233333221 11222222222222222 3333455544322


Q ss_pred             HhhhccCCCCCcccHHHHHhcccccCcccccCCHHHHHHHHHHHhhcCCcchHHHHHHHHHHHhhChHHHHHHHHHHhhh
Q 042142          262 KINKERGKDYAPMDLLDMLLDISEDESSEIKLTRENIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEIDSV  341 (376)
Q Consensus       262 ~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~aG~dTTa~~l~~~l~~L~~~P~v~~~l~~Ei~~v  341 (376)
                      +.  .........|+++.+++...+    ..++++++..++.++++||+||||++++|++|+|++||++|+|+|+||+++
T Consensus       264 ~~--~~~~~~~~~d~l~~ll~~~~~----~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~v  337 (503)
T PLN02394        264 SA--KGMDKEGLKCAIDHILEAQKK----GEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRDELDTV  337 (503)
T ss_pred             hh--ccCCcchhhhHHHHHHhcccc----CCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence            11  000111246899999976422    248999999999999999999999999999999999999999999999999


Q ss_pred             hCCCCCCCcccCCCChhHHHHHHHHhccCCCCCCC
Q 042142          342 VGKSRLVEESDIINLPYLQALVKETLRLHPTGPMS  376 (376)
Q Consensus       342 ~~~~~~~~~~~l~~lpyl~avikEtlRl~p~~p~~  376 (376)
                      +++++.++++++++||||+|||+||||++|++|+.
T Consensus       338 ~~~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~  372 (503)
T PLN02394        338 LGPGNQVTEPDTHKLPYLQAVVKETLRLHMAIPLL  372 (503)
T ss_pred             hCCCCCCCHhHHhhCHHHHHHHHHHHhcCCCcccc
Confidence            98766788999999999999999999999999863


No 12 
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=1.9e-50  Score=381.91  Aligned_cols=334  Identities=25%  Similarity=0.400  Sum_probs=247.7

Q ss_pred             cCCCCCCCCCCCCCCccccccccCCCchHHHHHHHHhcCCeEEEecCCccEEEccCHHHHHHHHHhCCccccCCCCcccc
Q 042142           28 SKITSSLPPSPMALPIIGHLHLLAPIPHQALHKLSIRYGPLIHLFLGSVPCIVACSPETAKEILKTHETSFCDRPISATV  107 (376)
Q Consensus        28 ~~~~~~~ppgp~~~p~lG~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~dp~~~~~il~~~~~~f~~~~~~~~~  107 (376)
                      .+.+++.+|||.++|++||++.+..+++..+.+++++||++|++++|+.++|+++||+++++++.++...|.+++.....
T Consensus        24 ~~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~~  103 (482)
T PTZ00404         24 KKIHKNELKGPIPIPILGNLHQLGNLPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIREMFVDNFDNFSDRPKIPSI  103 (482)
T ss_pred             hhccCCCCCCCCCCCeeccHhhhcccHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHHHHHHHhcchhhcCCCCccee
Confidence            44556778999999999999888778899999999999999999999999999999999999999876677766543322


Q ss_pred             cccccCCceeEeccCChhHHHHHHHHHhhcCchhhhhhhhhhHHHHHHHHHHHHHHhhcCCCceehHHHHHHHHHHHHHH
Q 042142          108 DYLTYGSADFSFAPYGPYWKFMKKLCMTQLLGGQTLNQFIPIRSEEIRRFMQLMLKKAKASEAVDVGKELIRLTNNVVSR  187 (376)
Q Consensus       108 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~  187 (376)
                      .....+ .+ ++..+|+.|+++|+++ .+.|+.+.++.+.+.+.+++..+++.|.+....++++|+.+.+.++++|+|++
T Consensus       104 ~~~~~~-~~-l~~~~g~~w~~~Rk~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~  180 (482)
T PTZ00404        104 KHGTFY-HG-IVTSSGEYWKRNREIV-GKAMRKTNLKHIYDLLDDQVDVLIESMKKIESSGETFEPRYYLTKFTMSAMFK  180 (482)
T ss_pred             eeeccC-Cc-eeccChHHHHHHHHHH-HHHHhhhccccHHHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHH
Confidence            111112 23 4566899999999997 58889999999999999999999999976545567799999999999999999


Q ss_pred             HHhCcccCCCc----hhHHHHHHHHHHHHhhhcCccccchhhhhhhhcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 042142          188 MTMGQICSNND----KEADEVRKLVQETAELTGKFNLQDYIWFCKNIDLQGFGKRLKEVRRKFDNMMERIIKEHQEARKI  263 (376)
Q Consensus       188 ~~fg~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  263 (376)
                      ++||.+++..+    +...++...+..............+++++... ...+.+...+..+.+.+++...++++++..  
T Consensus       181 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--  257 (482)
T PTZ00404        181 YIFNEDISFDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPL-YYQYLEHTDKNFKKIKKFIKEKYHEHLKTI--  257 (482)
T ss_pred             HHhccccccccccchhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHcc--
Confidence            99999876432    11234444444443332222222222222211 011112223334455555555554433211  


Q ss_pred             hhccCCCCCcccHHHHHhcccccCcccccCCHHHHHHHHHHHhhcCCcchHHHHHHHHHHHhhChHHHHHHHHHHhhhhC
Q 042142          264 NKERGKDYAPMDLLDMLLDISEDESSEIKLTRENIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEIDSVVG  343 (376)
Q Consensus       264 ~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~aG~dTTa~~l~~~l~~L~~~P~v~~~l~~Ei~~v~~  343 (376)
                        ..   ..+.|+++.+++...+.   ......++++++.++++||+||||++++|++++|++||++|+|+++||+++++
T Consensus       258 --~~---~~~~dll~~ll~~~~~~---~~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~v~~  329 (482)
T PTZ00404        258 --DP---EVPRDLLDLLIKEYGTN---TDDDILSILATILDFFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKSTVN  329 (482)
T ss_pred             --CC---CCcccHHHHHHHHhccC---CcccHHHHHHHHHHHHHhccchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHhc
Confidence              11   12469999999753111   11223458899999999999999999999999999999999999999999998


Q ss_pred             CCCCCCcccCCCChhHHHHHHHHhccCCCCCC
Q 042142          344 KSRLVEESDIINLPYLQALVKETLRLHPTGPM  375 (376)
Q Consensus       344 ~~~~~~~~~l~~lpyl~avikEtlRl~p~~p~  375 (376)
                      +.+.++++++++|||++|||+||||+||++|+
T Consensus       330 ~~~~~~~~~l~~L~yl~avi~EtlRl~p~~~~  361 (482)
T PTZ00404        330 GRNKVLLSDRQSTPYTVAIIKETLRYKPVSPF  361 (482)
T ss_pred             CCCCCCccccccChHHHHHHHHHHHhcCCccc
Confidence            76678999999999999999999999999985


No 13 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=1.7e-49  Score=373.23  Aligned_cols=329  Identities=26%  Similarity=0.386  Sum_probs=247.5

Q ss_pred             CCCCCCCCccccccccC-CCchHHHHHHHHhcCCeEEEecCCccEEEccCHHHHHHHHHhCCccccCCCCcccccccccC
Q 042142           35 PPSPMALPIIGHLHLLA-PIPHQALHKLSIRYGPLIHLFLGSVPCIVACSPETAKEILKTHETSFCDRPISATVDYLTYG  113 (376)
Q Consensus        35 ppgp~~~p~lG~~~~~~-~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~dp~~~~~il~~~~~~f~~~~~~~~~~~~~~~  113 (376)
                      ||||+++|++||++++. .+++..+.+++++||++|++++|+.++|+++||+++++|+.++...|.+++.......+.++
T Consensus         1 ppgp~~lP~iG~l~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~~~~~~   80 (466)
T PLN02655          1 VPAVPGLPVIGNLLQLKEKKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALTVLTRD   80 (466)
T ss_pred             CcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHHHHhcC
Confidence            78999999999998885 45889999999999999999999999999999999999999888888777543333323222


Q ss_pred             CceeEeccCChhHHHHHHHHHhhcCchhhhhhhhhhHHHHHHHHHHHHHHhhc--CCCceehHHHHHHHHHHHHHHHHhC
Q 042142          114 SADFSFAPYGPYWKFMKKLCMTQLLGGQTLNQFIPIRSEEIRRFMQLMLKKAK--ASEAVDVGKELIRLTNNVVSRMTMG  191 (376)
Q Consensus       114 ~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~--~~~~vd~~~~~~~~~~dvi~~~~fg  191 (376)
                      ...+.+..+|++|+++||.+.+++++...++.+.+.+.+.++.+++.+.+...  .++++|+.+.+..+++|+++.++||
T Consensus        81 ~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG  160 (466)
T PLN02655         81 KSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVKDDPHSPVNFRDVFENELFGLSLIQALG  160 (466)
T ss_pred             CCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhccccCCCceeHHHHHHHHHHHHHHHHHhc
Confidence            22233334589999999988888888888888999999999999998876543  4578999999999999999999999


Q ss_pred             cccCCCc-hh-------HHHHHHHHHHHHhhhcCccccchhhhhhhhcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 042142          192 QICSNND-KE-------ADEVRKLVQETAELTGKFNLQDYIWFCKNIDLQGFGKRLKEVRRKFDNMMERIIKEHQEARKI  263 (376)
Q Consensus       192 ~~~~~~~-~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  263 (376)
                      .+++... ..       ...+...+..+........+.+++|++++++...+.+...+......+++..+++++++....
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  240 (466)
T PLN02655        161 EDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPNKSFETRVQTTEFRRTAVMKALIKQQKKRIAR  240 (466)
T ss_pred             cccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence            8766432 10       112222233332222112222344544443222222333333334456666777665543221


Q ss_pred             hhccCCCCCcccHHHHHhcccccCcccccCCHHHHHHHHHHHhhcCCcchHHHHHHHHHHHhhChHHHHHHHHHHhhhhC
Q 042142          264 NKERGKDYAPMDLLDMLLDISEDESSEIKLTRENIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEIDSVVG  343 (376)
Q Consensus       264 ~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~aG~dTTa~~l~~~l~~L~~~P~v~~~l~~Ei~~v~~  343 (376)
                         ..   .+.|+++.+++..      ..++++++.+++.++++||+||||++++|++++|++||++|+|+|+||+++.|
T Consensus       241 ---~~---~~~d~l~~ll~~~------~~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~  308 (466)
T PLN02655        241 ---GE---ERDCYLDFLLSEA------THLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIREVCG  308 (466)
T ss_pred             ---CC---CcccHHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhC
Confidence               11   2358999999752      24899999999999999999999999999999999999999999999999998


Q ss_pred             CCCCCCcccCCCChhHHHHHHHHhccCCCCCCC
Q 042142          344 KSRLVEESDIINLPYLQALVKETLRLHPTGPMS  376 (376)
Q Consensus       344 ~~~~~~~~~l~~lpyl~avikEtlRl~p~~p~~  376 (376)
                      ++. ++++++++|||++|||+||||++||+|.+
T Consensus       309 ~~~-~~~~~l~~l~yl~a~i~EtlRl~p~~~~~  340 (466)
T PLN02655        309 DER-VTEEDLPNLPYLNAVFHETLRKYSPVPLL  340 (466)
T ss_pred             CCC-CCHHHHhcChHHHHHHHHHhccCCCcCCC
Confidence            654 89999999999999999999999999863


No 14 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=1.5e-48  Score=370.18  Aligned_cols=340  Identities=27%  Similarity=0.410  Sum_probs=243.9

Q ss_pred             CCCCCCCCCCCccccccccC-CCch-HHHHHHHHhc-CCeEEEecCCccEEEccCHHHHHHHHHhCCccccCCCCccccc
Q 042142           32 SSLPPSPMALPIIGHLHLLA-PIPH-QALHKLSIRY-GPLIHLFLGSVPCIVACSPETAKEILKTHETSFCDRPISATVD  108 (376)
Q Consensus        32 ~~~ppgp~~~p~lG~~~~~~-~~~~-~~~~~~~~~y-G~i~~~~~g~~~~v~i~dp~~~~~il~~~~~~f~~~~~~~~~~  108 (376)
                      .+.||||+++|++||++++. .++. ..+.+..++| |+|+++++|+.++|+++||+++++++.+++..|.+|+......
T Consensus        39 ~~~PPgp~~~P~iGnl~~l~~~~~~~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~~~~~  118 (534)
T PLN03018         39 RQLPPGPPGWPILGNLPELIMTRPRSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRERDADLADRPQLSIME  118 (534)
T ss_pred             CCCCcCCCCCCeeccHHHhccCCCcchhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCCchhhh
Confidence            34799999999999998873 2333 3466666666 7999999999999999999999999998888898887544433


Q ss_pred             ccccCCceeEeccCChhHHHHHHHHHhhcCchhhhhhhhhhHHHHHHHHHHHHHHhhcCCCceehHHHHHHHHHHHHHHH
Q 042142          109 YLTYGSADFSFAPYGPYWKFMKKLCMTQLLGGQTLNQFIPIRSEEIRRFMQLMLKKAKASEAVDVGKELIRLTNNVVSRM  188 (376)
Q Consensus       109 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~  188 (376)
                      .+..+..+..+..+|+.|+++|+.+...+++.+....+.+.+.+++.++++.+.+.+..+.++|+.+.+..+++|+|+++
T Consensus       119 ~l~~~~~~i~~~~~G~~Wk~~Rk~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~~~  198 (534)
T PLN03018        119 TIGDNYKSMGTSPYGEQFMKMKKVITTEIMSVKTLNMLEAARTIEADNLIAYIHSMYQRSETVDVRELSRVYGYAVTMRM  198 (534)
T ss_pred             hhccCCCceEecCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeHHHHHHHHHHHHHHHH
Confidence            33333234555556999999999986555565555556666667889999999865445567999999999999999999


Q ss_pred             HhCcccCCCc------hh-HHHHHHHHHHHHhh---hcCccccchhh-hhhhhcccchhHHHHHHHHHHHHHHHHHHHHH
Q 042142          189 TMGQICSNND------KE-ADEVRKLVQETAEL---TGKFNLQDYIW-FCKNIDLQGFGKRLKEVRRKFDNMMERIIKEH  257 (376)
Q Consensus       189 ~fg~~~~~~~------~~-~~~~~~~~~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  257 (376)
                      +||.++...+      .. ...+..........   .......++++ |++.+...+..++.....+.+.+++..+++++
T Consensus       199 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  278 (534)
T PLN03018        199 LFGRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGWNIDGQEERAKVNVNLVRSYNNPIIDER  278 (534)
T ss_pred             HhCCccccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhhcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999874311      11 01111112211111   11111112222 33322122233334444556777888888776


Q ss_pred             HHHHHhhhccCCCCCcccHHHHHhcccccCcccccCCHHHHHHHHHHHhhcCCcchHHHHHHHHHHHhhChHHHHHHHHH
Q 042142          258 QEARKINKERGKDYAPMDLLDMLLDISEDESSEIKLTRENIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREE  337 (376)
Q Consensus       258 ~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~aG~dTTa~~l~~~l~~L~~~P~v~~~l~~E  337 (376)
                      ++..+.. .+  .....|+++.+++...++ ....++++++++++.++++||+|||+++++|++++|++||++|+|+++|
T Consensus       279 ~~~~~~~-~~--~~~~~d~l~~ll~~~~~~-~~~~ls~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~P~~q~kl~~E  354 (534)
T PLN03018        279 VELWREK-GG--KAAVEDWLDTFITLKDQN-GKYLVTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEILRKALKE  354 (534)
T ss_pred             HHHhhhc-cC--CCCcccHHHHHHHhhccc-CCCCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHH
Confidence            6543210 11  012359999999753221 1114899999999999999999999999999999999999999999999


Q ss_pred             HhhhhCCCCCCCcccCCCChhHHHHHHHHhccCCCCCC
Q 042142          338 IDSVVGKSRLVEESDIINLPYLQALVKETLRLHPTGPM  375 (376)
Q Consensus       338 i~~v~~~~~~~~~~~l~~lpyl~avikEtlRl~p~~p~  375 (376)
                      |+++++.++.++.+|+.+|||++|||+||||++|++|.
T Consensus       355 i~~v~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~  392 (534)
T PLN03018        355 LDEVVGKDRLVQESDIPNLNYLKACCRETFRIHPSAHY  392 (534)
T ss_pred             HHHHhCCCCCCCHHHhcCCHHHHHHHHHHHhcCCCccc
Confidence            99999877778999999999999999999999999985


No 15 
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=1.7e-49  Score=378.25  Aligned_cols=330  Identities=19%  Similarity=0.308  Sum_probs=244.1

Q ss_pred             CCCCCCCCCCCccccccccC-------------------CCchHHHHHHHHhcCCeEEEecCCccEEEccCHHHHHHHHH
Q 042142           32 SSLPPSPMALPIIGHLHLLA-------------------PIPHQALHKLSIRYGPLIHLFLGSVPCIVACSPETAKEILK   92 (376)
Q Consensus        32 ~~~ppgp~~~p~lG~~~~~~-------------------~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~dp~~~~~il~   92 (376)
                      ...||||+++|++||++++.                   .+....+.+|+++|||++++++|+.++|+++||+++++++.
T Consensus        41 ~~~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~v~~il~  120 (516)
T PLN02290         41 RQGVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGTEPRLCLTETELIKELLT  120 (516)
T ss_pred             HcCCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCCccEEEECCHHHHHHHHh
Confidence            44589999999999987763                   12234578899999999999999999999999999999999


Q ss_pred             hCCccccCCCCcccc--cccccCCceeEeccCChhHHHHHHHHHhhcCchhhhhhhhhhHHHHHHHHHHHHHHhhcCC-C
Q 042142           93 THETSFCDRPISATV--DYLTYGSADFSFAPYGPYWKFMKKLCMTQLLGGQTLNQFIPIRSEEIRRFMQLMLKKAKAS-E  169 (376)
Q Consensus        93 ~~~~~f~~~~~~~~~--~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~-~  169 (376)
                      ++. .+.+++.....  ... .| .+ ++..+|+.|+++||.+ .+.|+.++++.+.+.+.++++.+++.+.+....+ .
T Consensus       121 ~~~-~~~~r~~~~~~~~~~~-~g-~~-l~~~~g~~Wk~~Rk~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~  195 (516)
T PLN02290        121 KYN-TVTGKSWLQQQGTKHF-IG-RG-LLMANGADWYHQRHIA-APAFMGDRLKGYAGHMVECTKQMLQSLQKAVESGQT  195 (516)
T ss_pred             cCC-CCCCCcchhhhHHHHH-hc-CC-ccccCchHHHHHHhhc-ccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence            763 34455422111  111 12 23 4556799999999997 5789999999999999999999999998754433 5


Q ss_pred             ceehHHHHHHHHHHHHHHHHhCcccCCCchhHHHHHHHHHHHHhhhcCccccchhhhhhhhcccchhHHHHHHHHHHHHH
Q 042142          170 AVDVGKELIRLTNNVVSRMTMGQICSNNDKEADEVRKLVQETAELTGKFNLQDYIWFCKNIDLQGFGKRLKEVRRKFDNM  249 (376)
Q Consensus       170 ~vd~~~~~~~~~~dvi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (376)
                      ++|+.+.+..+++|+|+.++||.+++..+    +....+...............+|+++++ ..+..+.+.+..+.+.++
T Consensus       196 ~vd~~~~~~~~~~~vi~~~~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~p~~~~~-p~~~~~~~~~~~~~~~~~  270 (516)
T PLN02290        196 EVEIGEYMTRLTADIISRTEFDSSYEKGK----QIFHLLTVLQRLCAQATRHLCFPGSRFF-PSKYNREIKSLKGEVERL  270 (516)
T ss_pred             eEEhHHHHHHHHHHHHHHHHcCCccccch----HHHHHHHHHHHHHHHhhhhhcCchhhhC-CChhHHHHHHHHHHHHHH
Confidence            79999999999999999999998875432    1222222221111111111122333332 122334455566778888


Q ss_pred             HHHHHHHHHHHHHhhhccCCCCCcccHHHHHhcccccC-cccccCCHHHHHHHHHHHhhcCCcchHHHHHHHHHHHhhCh
Q 042142          250 MERIIKEHQEARKINKERGKDYAPMDLLDMLLDISEDE-SSEIKLTRENIKAFILDIFAAGTDTSAITVEWALAELINHP  328 (376)
Q Consensus       250 ~~~~i~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~-~~~~~l~~~~l~~~~~~~~~aG~dTTa~~l~~~l~~L~~~P  328 (376)
                      +...++++++..+.   +..+....|+++.+++...+. .++..++++++.+++.++++||+|||+++++|++++|++||
T Consensus       271 ~~~~i~~~~~~~~~---~~~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~tl~~~l~~L~~~P  347 (516)
T PLN02290        271 LMEIIQSRRDCVEI---GRSSSYGDDLLGMLLNEMEKKRSNGFNLNLQLIMDECKTFFFAGHETTALLLTWTLMLLASNP  347 (516)
T ss_pred             HHHHHHHHHHHhhc---ccCCCCCCCHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCH
Confidence            88888876654321   111112469999998753221 12234889999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhhhCCCCCCCcccCCCChhHHHHHHHHhccCCCCCC
Q 042142          329 DMMKKAREEIDSVVGKSRLVEESDIINLPYLQALVKETLRLHPTGPM  375 (376)
Q Consensus       329 ~v~~~l~~Ei~~v~~~~~~~~~~~l~~lpyl~avikEtlRl~p~~p~  375 (376)
                      ++|+|+|+|+++++|++ .++++|+++|||++|||+||||++|++|.
T Consensus       348 ~vq~kl~~Ei~~v~~~~-~~~~~~l~~lpYl~avi~EtlRl~p~~~~  393 (516)
T PLN02290        348 TWQDKVRAEVAEVCGGE-TPSVDHLSKLTLLNMVINESLRLYPPATL  393 (516)
T ss_pred             HHHHHHHHHHHHHhCCC-CCCHHHHhcChHHHHHHHHHHHcCCCccc
Confidence            99999999999999864 78999999999999999999999999985


No 16 
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=8.8e-48  Score=364.06  Aligned_cols=340  Identities=19%  Similarity=0.217  Sum_probs=241.3

Q ss_pred             HHHHHHHHHHHHHHHH-HHHHh-cCCCCCCCCCCCCCCccccccccC-----CCchHHHHHHHHhcCCeEEEecCCccEE
Q 042142            7 YIVLFLVWLVSTILVR-SIFRR-SKITSSLPPSPMALPIIGHLHLLA-----PIPHQALHKLSIRYGPLIHLFLGSVPCI   79 (376)
Q Consensus         7 ~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~ppgp~~~p~lG~~~~~~-----~~~~~~~~~~~~~yG~i~~~~~g~~~~v   79 (376)
                      +.++++.++++++++. .+.++ ..++.+.||||+++|++||++.+.     ..++..+.+++++||+++++++|+.++|
T Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~v   89 (490)
T PLN02500         10 LLLFLLPSILSLLLVFILTKRRPKQKRFNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTI   89 (490)
T ss_pred             HHHHHHHHHHHHHHHHHhCccccccCCCCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeE
Confidence            3444444444443333 23333 344457899999999999976431     3456778999999999999999999999


Q ss_pred             EccCHHHHHHHHHhCCccccCCCCcccccccccCCceeEeccCChhHHHHHHHHHhhcCchhhhhh-hhhhHHHHHHHHH
Q 042142           80 VACSPETAKEILKTHETSFCDRPISATVDYLTYGSADFSFAPYGPYWKFMKKLCMTQLLGGQTLNQ-FIPIRSEEIRRFM  158 (376)
Q Consensus        80 ~i~dp~~~~~il~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~-~~~~~~~~~~~~~  158 (376)
                      +++||+++++++.+++..|.++........+  |..+ ++..+|+.|+++|+.+. +.|+...++. +.+.+.+.+..++
T Consensus        90 vv~~p~~~~~vl~~~~~~f~~~~~~~~~~~~--g~~~-~~~~~g~~wr~~Rk~~~-~~f~~~~l~~~~~~~~~~~~~~~~  165 (490)
T PLN02500         90 VSADAGLNRFILQNEGRLFECSYPRSIGGIL--GKWS-MLVLVGDMHRDMRSISL-NFLSHARLRTHLLKEVERHTLLVL  165 (490)
T ss_pred             EecCHHHHHHHHhCCCCeEEeeCchHHHHHh--Cccc-ccccCCHHHHHHHHHHH-HhcChHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999877777543222111222  2112 34457999999999974 7788888876 4667677777766


Q ss_pred             HHHHHhhcCCCceehHHHHHHHHHHHHHHHHhCcccCCCchhHHHHHHHHHHHHhhhcCccccchhhhhhhhcccchhHH
Q 042142          159 QLMLKKAKASEAVDVGKELIRLTNNVVSRMTMGQICSNNDKEADEVRKLVQETAELTGKFNLQDYIWFCKNIDLQGFGKR  238 (376)
Q Consensus       159 ~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (376)
                      +.+.    .+.++|+.+.+..+++|+|++++||.+.+..  ....+...+.........  ....+|.      .. .++
T Consensus       166 ~~~~----~~~~vd~~~~~~~~~~~vi~~~~fg~~~~~~--~~~~~~~~~~~~~~~~~~--~~~~~p~------~~-~~~  230 (490)
T PLN02500        166 DSWK----ENSTFSAQDEAKKFTFNLMAKHIMSMDPGEE--ETEQLKKEYVTFMKGVVS--APLNFPG------TA-YRK  230 (490)
T ss_pred             HHhC----CCCCEEehHHHHHHHHHHHHHHHhCCCCCch--HHHHHHHHHHHHHhhhhc--chhcCCC------cc-cHH
Confidence            6653    3457999999999999999999999875432  122222222222211100  0001111      11 133


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccHHHHHhcccccCcccccCCHHHHHHHHHHHhhcCCcchHHHHH
Q 042142          239 LKEVRRKFDNMMERIIKEHQEARKINKERGKDYAPMDLLDMLLDISEDESSEIKLTRENIKAFILDIFAAGTDTSAITVE  318 (376)
Q Consensus       239 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~aG~dTTa~~l~  318 (376)
                      ..+..+.+.+++..+++++++..+.   +.......|+++.+++.       ..++++++++++.++++||+||||++++
T Consensus       231 ~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~d~l~~ll~~-------~~ls~~~i~~~~~~ll~AG~dTta~tl~  300 (490)
T PLN02500        231 ALKSRATILKFIERKMEERIEKLKE---EDESVEEDDLLGWVLKH-------SNLSTEQILDLILSLLFAGHETSSVAIA  300 (490)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhc---ccCCCCcchHHHHHHhc-------cCCCHHHHHHHHHHHHHhhhhHHHHHHH
Confidence            4455677888888888776554321   11111246899999863       1388999999999999999999999999


Q ss_pred             HHHHHHhhChHHHHHHHHHHhhhhC-----CCCCCCcccCCCChhHHHHHHHHhccCCCCCC
Q 042142          319 WALAELINHPDMMKKAREEIDSVVG-----KSRLVEESDIINLPYLQALVKETLRLHPTGPM  375 (376)
Q Consensus       319 ~~l~~L~~~P~v~~~l~~Ei~~v~~-----~~~~~~~~~l~~lpyl~avikEtlRl~p~~p~  375 (376)
                      |++++|++||++|+|+|+|++++.+     .++.++++|+++|||++||||||||+||++|.
T Consensus       301 ~~l~~L~~~Pevq~kl~~Ei~~v~~~~~~~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~  362 (490)
T PLN02500        301 LAIFFLQGCPKAVQELREEHLEIARAKKQSGESELNWEDYKKMEFTQCVINETLRLGNVVRF  362 (490)
T ss_pred             HHHHHHhhCHHHHHHHHHHHHHHhhccccCCCCCCCHHHhccCHHHHHHHHHHHhcCCCccC
Confidence            9999999999999999999999864     13458899999999999999999999999986


No 17 
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=3.4e-47  Score=357.54  Aligned_cols=332  Identities=29%  Similarity=0.439  Sum_probs=245.6

Q ss_pred             CCCCCCCCCCCCccccccccCC---CchHHHHHHHHhcCCeEEEecCCccEEEccCHHHHHHHHHhCCccccCCCCcc-c
Q 042142           31 TSSLPPSPMALPIIGHLHLLAP---IPHQALHKLSIRYGPLIHLFLGSVPCIVACSPETAKEILKTHETSFCDRPISA-T  106 (376)
Q Consensus        31 ~~~~ppgp~~~p~lG~~~~~~~---~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~dp~~~~~il~~~~~~f~~~~~~~-~  106 (376)
                      +...||||+++|++|++..+..   ....++.++..+||++|+.|+|+.++|+++||+.+++|+.++...+...+... .
T Consensus        33 ~~~~~~gp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~~  112 (497)
T KOG0157|consen   33 KKKLPPGPPGWPLIGNLLEFLKPLEEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPES  112 (497)
T ss_pred             HhccCCCCCCCCcccchHHhhcchhHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHHH
Confidence            5678999999999999988732   45677889999999999999999999999999999999976544443333322 2


Q ss_pred             ccccccCCceeEeccCChhHHHHHHHHHhhcCchhhhhhhhhhHHHHHHHHHHHHHHhhcCCCceehHHHHHHHHHHHHH
Q 042142          107 VDYLTYGSADFSFAPYGPYWKFMKKLCMTQLLGGQTLNQFIPIRSEEIRRFMQLMLKKAKASEAVDVGKELIRLTNNVVS  186 (376)
Q Consensus       107 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vd~~~~~~~~~~dvi~  186 (376)
                      .... .|. |+++. +|+.|+++||++ .+.|+.+.++.+.+.+.+++..+...+..... +..+|+++.+.++|+|+|+
T Consensus       113 ~~~~-lG~-gll~~-~g~~W~~~Rk~~-~~~f~~~~L~~~~~~~~~~~~~~~~~~~~~~~-~~~vd~~~~~~~~tld~i~  187 (497)
T KOG0157|consen  113 LKPW-LGD-GLLFS-DGEKWHKHRKLL-TPAFHFEILKSFVPVFIESSLILLLLLELAAS-GEEVDLQDLLKRLTLDIIC  187 (497)
T ss_pred             HHHH-hcC-ccccC-CchHHHHHHhhc-cHhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCeEcHHHHHHHHHHHHHH
Confidence            2222 222 44444 499999999986 58899999999999999999888888776433 3339999999999999999


Q ss_pred             HHHhCccc-CCCchhHHHHHHHHHHHHhhhcCccccchhh-hhhhhcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 042142          187 RMTMGQIC-SNNDKEADEVRKLVQETAELTGKFNLQDYIW-FCKNIDLQGFGKRLKEVRRKFDNMMERIIKEHQEARKIN  264 (376)
Q Consensus       187 ~~~fg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  264 (376)
                      .++||... +.......++..+++.+.........   .| +..++...+..++..++.+.++++++++|+++++.....
T Consensus       188 ~~~~G~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~---~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~iI~~rr~~~~~~  264 (497)
T KOG0157|consen  188 KTAMGPESLDAEGPELFEYVQAFDDLTELISKRIN---LPLGTKFLYGLKSERKLKKARKILHDFLEKIIRERREELEKE  264 (497)
T ss_pred             HHhcCCccccccCCcccHHHHHHHHHHHHHHHHHc---CchhhhHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            99999222 22222334555666654444332211   12 222222223567888899999999999998887655321


Q ss_pred             hccCCCCCcccHHHHHhcccccCcccccCCHHHHHHHHHHHhhcCCcchHHHHHHHHHHHhhChHHHHHHHHHHhhhhCC
Q 042142          265 KERGKDYAPMDLLDMLLDISEDESSEIKLTRENIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEIDSVVGK  344 (376)
Q Consensus       265 ~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~aG~dTTa~~l~~~l~~L~~~P~v~~~l~~Ei~~v~~~  344 (376)
                      .... .....|+++.+... .+    ..+++++|.+++.++++||+||||++++|++++|+.||+||+|+++|+++++|+
T Consensus       265 ~~~~-~~~~~d~L~~~~~~-~~----~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~i~~~  338 (497)
T KOG0157|consen  265 GSGE-EKKRLDFLDTLLLE-ED----KPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVDEILGN  338 (497)
T ss_pred             CCcc-cchhhhHHHHHHHh-cc----CCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCC
Confidence            1110 11346888863322 11    358999999999999999999999999999999999999999999999999985


Q ss_pred             CCCC-CcccCCCChhHHHHHHHHhccCCCCCCC
Q 042142          345 SRLV-EESDIINLPYLQALVKETLRLHPTGPMS  376 (376)
Q Consensus       345 ~~~~-~~~~l~~lpyl~avikEtlRl~p~~p~~  376 (376)
                      .... ...+.++|+||++|||||||||||+|+.
T Consensus       339 ~~~~~~~~~~~~m~yl~~vi~EsLRLyppvp~~  371 (497)
T KOG0157|consen  339 RDDKWEVEKLDQMKYLEMVIKESLRLYPPVPLV  371 (497)
T ss_pred             CCCCCChhhhhhhHHHHHHHHHHhccCCCCchh
Confidence            4322 2222235999999999999999999973


No 18 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=2.4e-46  Score=356.50  Aligned_cols=333  Identities=18%  Similarity=0.320  Sum_probs=235.3

Q ss_pred             CCCCCCCCccccccccCCCchHHHHHHHHhc---CCeEEEecCCccEEEccCHHHHHHHHHhCCccccCCCCcc-ccccc
Q 042142           35 PPSPMALPIIGHLHLLAPIPHQALHKLSIRY---GPLIHLFLGSVPCIVACSPETAKEILKTHETSFCDRPISA-TVDYL  110 (376)
Q Consensus        35 ppgp~~~p~lG~~~~~~~~~~~~~~~~~~~y---G~i~~~~~g~~~~v~i~dp~~~~~il~~~~~~f~~~~~~~-~~~~~  110 (376)
                      +|||+++|++||++.+..+ +..+.+|.++|   |+++++++|+.+.|+++||+++++|+.++...|.+++... .....
T Consensus        32 ~pgp~~~p~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~~~~  110 (516)
T PLN03195         32 RKGPKSWPIIGAALEQLKN-YDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYHSYMEVL  110 (516)
T ss_pred             cCCCCCCCeecchHHHHhc-cchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHHHHHHHH
Confidence            6899999999998654332 44567777777   8999999999999999999999999987645564432211 11111


Q ss_pred             ccCCceeEeccCChhHHHHHHHHHhhcCchhhhhhhhhhH-HHHHHHHHHHHHHhhcCCCceehHHHHHHHHHHHHHHHH
Q 042142          111 TYGSADFSFAPYGPYWKFMKKLCMTQLLGGQTLNQFIPIR-SEEIRRFMQLMLKKAKASEAVDVGKELIRLTNNVVSRMT  189 (376)
Q Consensus       111 ~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~  189 (376)
                       .+ .+ +++.+|+.|+++||.+ ++.|+.+.++.+.+.+ .+.++.+++.+.+...++.++|+.+.+..+++|+|+.++
T Consensus       111 -~g-~~-l~~~~g~~w~~~Rr~l-~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~  186 (516)
T PLN03195        111 -LG-DG-IFNVDGELWRKQRKTA-SFEFASKNLRDFSTVVFREYSLKLSSILSQASFANQVVDMQDLFMRMTLDSICKVG  186 (516)
T ss_pred             -hc-Ce-eeccCcHHHHHHHHhc-chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEcHHHHHHHHHHHHHHHHH
Confidence             12 23 4567899999999997 5788999999998876 566777777776544456789999999999999999999


Q ss_pred             hCcccCCCch--hHHHHHHHHHHHHhhhcCccccchhhhhhhhcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 042142          190 MGQICSNNDK--EADEVRKLVQETAELTGKFNLQDYIWFCKNIDLQGFGKRLKEVRRKFDNMMERIIKEHQEARKINKER  267 (376)
Q Consensus       190 fg~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  267 (376)
                      ||.+++..+.  ....+...++........ .....++.+..+...+..+.+.+..+.+.+++...++++++..... ..
T Consensus       187 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~  264 (516)
T PLN03195        187 FGVEIGTLSPSLPENPFAQAFDTANIIVTL-RFIDPLWKLKKFLNIGSEALLSKSIKVVDDFTYSVIRRRKAEMDEA-RK  264 (516)
T ss_pred             hCCCccccccCCCccHHHHHHHHHHHHHHH-HHhcchhhHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cc
Confidence            9998764321  112333333322111100 0111111111111112233445566677788888887765543210 01


Q ss_pred             CCCCCcccHHHHHhcccccCcccccCCHHHHHHHHHHHhhcCCcchHHHHHHHHHHHhhChHHHHHHHHHHhhhhCC---
Q 042142          268 GKDYAPMDLLDMLLDISEDESSEIKLTRENIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEIDSVVGK---  344 (376)
Q Consensus       268 ~~~~~~~dll~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~aG~dTTa~~l~~~l~~L~~~P~v~~~l~~Ei~~v~~~---  344 (376)
                      ..+....|+++.+++...+  ++..++++++.++++++++||+||||++++|++|+|++||++|+|+|+|+++++++   
T Consensus       265 ~~~~~~~d~l~~ll~~~~~--~~~~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~  342 (516)
T PLN03195        265 SGKKVKHDILSRFIELGED--PDSNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALEKERAK  342 (516)
T ss_pred             ccccccccHHHHHHhccCC--CCCCCCHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhcccc
Confidence            0011246899999975322  12358999999999999999999999999999999999999999999999998642   


Q ss_pred             -----------------CCCCCcccCCCChhHHHHHHHHhccCCCCCCC
Q 042142          345 -----------------SRLVEESDIINLPYLQALVKETLRLHPTGPMS  376 (376)
Q Consensus       345 -----------------~~~~~~~~l~~lpyl~avikEtlRl~p~~p~~  376 (376)
                                       ++.++++++.+||||+|||+||||+|||+|++
T Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~  391 (516)
T PLN03195        343 EEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQD  391 (516)
T ss_pred             cccccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcch
Confidence                             24578899999999999999999999999863


No 19 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=5.7e-46  Score=351.09  Aligned_cols=330  Identities=17%  Similarity=0.222  Sum_probs=230.7

Q ss_pred             CCCCCCCCccccccccCCCc---hHHHHHHHHhcCCeEE---EecCCccEEEccCHHHHHHHHHhCCccccCCCCccccc
Q 042142           35 PPSPMALPIIGHLHLLAPIP---HQALHKLSIRYGPLIH---LFLGSVPCIVACSPETAKEILKTHETSFCDRPISATVD  108 (376)
Q Consensus        35 ppgp~~~p~lG~~~~~~~~~---~~~~~~~~~~yG~i~~---~~~g~~~~v~i~dp~~~~~il~~~~~~f~~~~~~~~~~  108 (376)
                      .|||.++|++||++.+.++.   ++.+.+...+||..++   .++|+.++|+++||+++++|+.++...|.+++......
T Consensus        33 ~p~p~~~pl~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~~~~~~  112 (500)
T PLN02169         33 QPILKNWPFLGMLPGMLHQIPRIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPEFKKIF  112 (500)
T ss_pred             CCCCCCCCcccchHHHHHccCcHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHHHHHHH
Confidence            45788999999987663222   2344444555886655   67899999999999999999998766676543221111


Q ss_pred             ccccCCceeEeccCChhHHHHHHHHHhhcCchhhhhh--hhhhHHHHHHHHHHHHHHhhcCCCceehHHHHHHHHHHHHH
Q 042142          109 YLTYGSADFSFAPYGPYWKFMKKLCMTQLLGGQTLNQ--FIPIRSEEIRRFMQLMLKKAKASEAVDVGKELIRLTNNVVS  186 (376)
Q Consensus       109 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~l~~~~~~~~~vd~~~~~~~~~~dvi~  186 (376)
                      .. .| .+ ++..+|+.|+++||.+ .+.|+.+.+..  +.+.+.+++..+++.+.+...++.++|+.+.+.++|+|+|+
T Consensus       113 ~~-~g-~g-l~~~~g~~Wr~~Rk~l-~p~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~dvi~  188 (500)
T PLN02169        113 DV-LG-EG-ILTVDFELWEDLRKSN-HALFHNQDFIELSLSSNKSKLKEGLVPFLDNAAHENIIIDLQDVFMRFMFDTSS  188 (500)
T ss_pred             Hh-hc-Cc-ccccCcHHHHHHHHHH-HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEeHHHHHHHHHHHHHH
Confidence            11 12 23 4556799999999997 58898877653  34667778888888887655556789999999999999999


Q ss_pred             HHHhCcccCCCch--hHHHHHHHHHHHHhhhcCccccchhhh-hhhhcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 042142          187 RMTMGQICSNNDK--EADEVRKLVQETAELTGKFNLQDYIWF-CKNIDLQGFGKRLKEVRRKFDNMMERIIKEHQEARKI  263 (376)
Q Consensus       187 ~~~fg~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  263 (376)
                      +++||.+.+..+.  ...++...+..............++.+ +..+...+..++..+..+.+++++..+++++++....
T Consensus       189 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~~~  268 (500)
T PLN02169        189 ILMTGYDPMSLSIEMLEVEFGEAADIGEEAIYYRHFKPVILWRLQNWIGIGLERKMRTALATVNRMFAKIISSRRKEEIS  268 (500)
T ss_pred             hheeCCCccccCCCCCCCHHHHHHHHHHHHHHhHHhccHHHHHHHHHhCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            9999987653221  112333333332211111011111111 1111123345667778888999999999877543211


Q ss_pred             hhccCCCCCcccHHHHHhcccccC-cccccCCHHHHHHHHHHHhhcCCcchHHHHHHHHHHHhhChHHHHHHHHHHhhhh
Q 042142          264 NKERGKDYAPMDLLDMLLDISEDE-SSEIKLTRENIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEIDSVV  342 (376)
Q Consensus       264 ~~~~~~~~~~~dll~~ll~~~~~~-~~~~~l~~~~l~~~~~~~~~aG~dTTa~~l~~~l~~L~~~P~v~~~l~~Ei~~v~  342 (376)
                        ....+....|+++.+++...+. .....++++++.+++.++++||+||||++++|++++|++||++|+|+++||++++
T Consensus       269 --~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~l~AG~dTTa~tl~w~l~~La~~Pevq~kl~~Ei~~v~  346 (500)
T PLN02169        269 --RAETEPYSKDALTYYMNVDTSKYKLLKPKKDKFIRDVIFSLVLAGRDTTSSALTWFFWLLSKHPQVMAKIRHEINTKF  346 (500)
T ss_pred             --cccccCCCcCHHHHHHhccccccccccCCChHHHHHHHHHHHHhchhHHHHHHHHHHHHHHCCHHHHHHHHHHHHhhC
Confidence              1111112368999998753211 1112478899999999999999999999999999999999999999999999864


Q ss_pred             CCCCCCCcccCCCChhHHHHHHHHhccCCCCCCC
Q 042142          343 GKSRLVEESDIINLPYLQALVKETLRLHPTGPMS  376 (376)
Q Consensus       343 ~~~~~~~~~~l~~lpyl~avikEtlRl~p~~p~~  376 (376)
                            +++|+.+||||+|||+||||+|||+|++
T Consensus       347 ------~~~dl~~L~Yl~avi~EtLRl~P~vp~~  374 (500)
T PLN02169        347 ------DNEDLEKLVYLHAALSESMRLYPPLPFN  374 (500)
T ss_pred             ------CHHHHhcCHHHHHHHHHHHhcCCCCCcC
Confidence                  5689999999999999999999999864


No 20 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=6.8e-46  Score=330.80  Aligned_cols=327  Identities=25%  Similarity=0.391  Sum_probs=256.7

Q ss_pred             CCCCCCCCCcccccccc----CCCchHHHHHHHHhcCCeEEEe-cCCccEEEccCHHHHHHHHHhCCccccCCC-Cc---
Q 042142           34 LPPSPMALPIIGHLHLL----APIPHQALHKLSIRYGPLIHLF-LGSVPCIVACSPETAKEILKTHETSFCDRP-IS---  104 (376)
Q Consensus        34 ~ppgp~~~p~lG~~~~~----~~~~~~~~~~~~~~yG~i~~~~-~g~~~~v~i~dp~~~~~il~~~~~~f~~~~-~~---  104 (376)
                      -.|||.++|++|.+..+    ..+.|+.....+++|||||+.. +|+...|++.+|+.++.+++..+ .+.-|+ ..   
T Consensus        51 ~IP~p~~~~~l~~l~~~~~~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~EG-~~P~Rp~~~~~w  129 (519)
T KOG0159|consen   51 EIPGPKGLPFLGLLWIWRAGGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNEG-KYPFRPLLIEPW  129 (519)
T ss_pred             hcCCCCCccHHHHHHHHHhhhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcCC-CCCCcccccchh
Confidence            45899999999998743    2467888999999999999999 89999999999999999999764 344553 11   


Q ss_pred             ccccccccCCceeEeccCChhHHHHHHHHHhhcCchhhhhhhhhhHHHHHHHHHHHHHHhhc---CCCceehHHHHHHHH
Q 042142          105 ATVDYLTYGSADFSFAPYGPYWKFMKKLCMTQLLGGQTLNQFIPIRSEEIRRFMQLMLKKAK---ASEAVDVGKELIRLT  181 (376)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~---~~~~vd~~~~~~~~~  181 (376)
                      ...... .+....++..+|++|++.|..+++.+++++.++.|.|.++..++.+++.+....+   +..+.|+.+.+.+++
T Consensus       130 ~~~rd~-~~~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~~~~~~~~D~~~~l~~ws  208 (519)
T KOG0159|consen  130 VAYRDF-RGGVCGLFLLEGPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDPERGELVPDFAQELYRWS  208 (519)
T ss_pred             hhhHHh-hccCCCcccCCCHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHH
Confidence            111112 2223346777899999999999999999999999999999999999999998765   234679999999999


Q ss_pred             HHHHHHHHhCcccCCCc----hhHHHHHHHHHHHHhhhcCccccchhhhhhhhcccchhHHHHHHHHHHHHHHHHHHHHH
Q 042142          182 NNVVSRMTMGQICSNND----KEADEVRKLVQETAELTGKFNLQDYIWFCKNIDLQGFGKRLKEVRRKFDNMMERIIKEH  257 (376)
Q Consensus       182 ~dvi~~~~fg~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  257 (376)
                      ++.||.++||.+++...    .+.+.+.+++..++.....+..  .++++++++ ++..+++.++.+.+.++.+..|+..
T Consensus       209 lEsi~~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s~~l~~--~p~l~r~~~-t~~wk~~~~~~D~i~~~~~~~Id~~  285 (519)
T KOG0159|consen  209 LESICLVLLGTRLGLLGESPPSEAQQFIDAIKKMFESSAQLML--MPSLWRYFP-TKVWKDFVRAWDQIFDVGDKYIDNA  285 (519)
T ss_pred             HHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHHhHHHHHh--cchHHHhCC-ChHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999987543    3456677777777655443322  225666664 4445667777788888888888887


Q ss_pred             HHHHHhhhccCCCCCcc-cHHHHHhcccccCcccccCCHHHHHHHHHHHhhcCCcchHHHHHHHHHHHhhChHHHHHHHH
Q 042142          258 QEARKINKERGKDYAPM-DLLDMLLDISEDESSEIKLTRENIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKARE  336 (376)
Q Consensus       258 ~~~~~~~~~~~~~~~~~-dll~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~aG~dTTa~~l~~~l~~L~~~P~v~~~l~~  336 (376)
                      .+..+......  .+.. .+...+...        .++.+++..+++++++||.||||+|++|++|.|++||++|+||++
T Consensus       286 l~~l~~~~~~~--~~~~~~l~~~L~~~--------~l~~k~~~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~L~~  355 (519)
T KOG0159|consen  286 LEELEKQDSAG--SEYTGSLLELLLRK--------ELSRKDAKANVMDLLAAGVDTTSNTLLWALYELARNPEVQQRLRE  355 (519)
T ss_pred             HHHHHhccccc--cchhHHHHHHHHHc--------cCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHhcChHHHHHHHH
Confidence            76654321110  1122 333333321        378899999999999999999999999999999999999999999


Q ss_pred             HHhhhhCC-CCCCCcccCCCChhHHHHHHHHhccCCCCCC
Q 042142          337 EIDSVVGK-SRLVEESDIINLPYLQALVKETLRLHPTGPM  375 (376)
Q Consensus       337 Ei~~v~~~-~~~~~~~~l~~lpyl~avikEtlRl~p~~p~  375 (376)
                      |+.++... +..++.+++.+||||+||||||+||||++|.
T Consensus       356 Ei~~~~p~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~  395 (519)
T KOG0159|consen  356 EILAVLPSGNSELTQKALTNMPYLRACIKETLRLYPVVPG  395 (519)
T ss_pred             HHHhhCCCcccccchHHHhhCHHHHHHHHhhhceeccccc
Confidence            99999886 5678889999999999999999999999986


No 21 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=2.3e-47  Score=359.80  Aligned_cols=331  Identities=34%  Similarity=0.540  Sum_probs=256.4

Q ss_pred             CCCCCCCCccccccccC--CCchHHHHHHHHhcCCeEEEecCCccEEEccCHHHHHHHHHhCCccccCCCCcccccc--c
Q 042142           35 PPSPMALPIIGHLHLLA--PIPHQALHKLSIRYGPLIHLFLGSVPCIVACSPETAKEILKTHETSFCDRPISATVDY--L  110 (376)
Q Consensus        35 ppgp~~~p~lG~~~~~~--~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~dp~~~~~il~~~~~~f~~~~~~~~~~~--~  110 (376)
                      ||||.++|++|+++.+.  ++++..+.+++++|||||++++|+.++|+|+||+++++|+.++...|..++.......  .
T Consensus         1 Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~~   80 (463)
T PF00067_consen    1 PPGPPPLPILGNLLQFRRKGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIFRG   80 (463)
T ss_dssp             SSCSSSBTTTBTHHHHHTTHHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHHHH
T ss_pred             CcCCCCcCceeEHHHhcCCCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhccccccccccccccccccccccccc
Confidence            89999999999998875  6788899999999999999999999999999999999999988766765533222221  1


Q ss_pred             ccCCceeEeccCChhHHHHHHHHHhhcCchh-hhhhhhhhHHHHHHHHHHHHHHhhcCCCceehHHHHHHHHHHHHHHHH
Q 042142          111 TYGSADFSFAPYGPYWKFMKKLCMTQLLGGQ-TLNQFIPIRSEEIRRFMQLMLKKAKASEAVDVGKELIRLTNNVVSRMT  189 (376)
Q Consensus       111 ~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~  189 (376)
                      ...+.+ ++..+|+.|+.+|+.+. +.|+.. .+ .+.+.+.++++.+++.+.+....+.++|+.+.+..+++|+++.++
T Consensus        81 ~~~~~~-l~~~~~~~~~~~R~~~~-~~~~~~~~~-~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d~i~~~~  157 (463)
T PF00067_consen   81 PFGGKG-LFFSDGERWRRQRRLLA-PAFSSKKIL-KLEPLIDEEAEELIDQLRKKAGSSGPVDLFDWLRRFALDVIGRVL  157 (463)
T ss_dssp             HHTTTS-STTSSHHHHHHHHHHHH-HHHSHHHHH-HHHHHHHHHHHHHHHHHHHTTTSESEEEHHHHHHHHHHHHHHHHH
T ss_pred             cccccc-ccccccccccccccccc-ccccccccc-ccccccccccccccccccccccccceeeeeccccccccccccccc
Confidence            112223 44556899999999986 455555 56 899999999999999999876555579999999999999999999


Q ss_pred             hCcccCCCc-hhHHHHHHHHHHHHhhhcCc--cccchhhhhhhhcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 042142          190 MGQICSNND-KEADEVRKLVQETAELTGKF--NLQDYIWFCKNIDLQGFGKRLKEVRRKFDNMMERIIKEHQEARKINKE  266 (376)
Q Consensus       190 fg~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  266 (376)
                      ||.+++..+ ....++.+.+..........  .....+|+++++ .....+.+.++.+.+.+++...++++++..+.   
T Consensus       158 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---  233 (463)
T PF00067_consen  158 FGKDFGSLDDEDFEEFLEAFDELFELLSNFFWNLPFFFPWLKYL-PTPLFRRFKRARDRLRKYIKEIIEERREELDD---  233 (463)
T ss_dssp             HSSHHHGTTHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTS-SHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHS---
T ss_pred             ccceeeeccccccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccccc---
Confidence            999877433 23345556555554433221  122234444433 22344556666677788888888777665432   


Q ss_pred             cCCCCCcccHHHHHhcccccCcccccCCHHHHHHHHHHHhhcCCcchHHHHHHHHHHHhhChHHHHHHHHHHhhhhCCCC
Q 042142          267 RGKDYAPMDLLDMLLDISEDESSEIKLTRENIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEIDSVVGKSR  346 (376)
Q Consensus       267 ~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~aG~dTTa~~l~~~l~~L~~~P~v~~~l~~Ei~~v~~~~~  346 (376)
                      +  .....|+++.++....+.+.+..++++++..+++++++||+|||+.+++|++++|++||++|+|+++||+++.++++
T Consensus       234 ~--~~~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~  311 (463)
T PF00067_consen  234 G--DESRRDLLDSLLQASSDSDGPSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREEIDSVLGDGR  311 (463)
T ss_dssp             S--SSSCSSHHHHHHHHHHTTTTTSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTTSS
T ss_pred             c--ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            1  11356999999987411111136999999999999999999999999999999999999999999999999998767


Q ss_pred             CCCcccCCCChhHHHHHHHHhccCCCCC
Q 042142          347 LVEESDIINLPYLQALVKETLRLHPTGP  374 (376)
Q Consensus       347 ~~~~~~l~~lpyl~avikEtlRl~p~~p  374 (376)
                      .++.+++++||||+|||+||||++|++|
T Consensus       312 ~~~~~~l~~l~yl~a~i~EtlRl~p~~~  339 (463)
T PF00067_consen  312 EITFEDLSKLPYLDAVIKETLRLYPPVP  339 (463)
T ss_dssp             SHHHHHHGTGHHHHHHHHHHHHHSTSSS
T ss_pred             cccccccccccccccccccccccccccc
Confidence            7899999999999999999999999998


No 22 
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=2.1e-45  Score=345.23  Aligned_cols=315  Identities=19%  Similarity=0.274  Sum_probs=233.1

Q ss_pred             CCCCCCCCCCCCCCccccccccCCCchHHHHHHHHhcCCeEEEecCCccEEEccCHHHHHHHHHhCCccccCCCCccccc
Q 042142           29 KITSSLPPSPMALPIIGHLHLLAPIPHQALHKLSIRYGPLIHLFLGSVPCIVACSPETAKEILKTHETSFCDRPISATVD  108 (376)
Q Consensus        29 ~~~~~~ppgp~~~p~lG~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~dp~~~~~il~~~~~~f~~~~~~~~~~  108 (376)
                      +.+++.||||+++|++||++.+..+++..+.+++++||++|++++|+.++++++||+++++++.++...|..+.......
T Consensus        27 ~~r~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~  106 (463)
T PLN02774         27 YSKKGLPPGTMGWPLFGETTEFLKQGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILMNEGKGLVPGYPQSMLD  106 (463)
T ss_pred             cCCCCCCCCCCCCCchhhHHHHHHhhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHcCCCCeEEecCCHHHHH
Confidence            34456889999999999988776667788999999999999999999999999999999999987766664332211222


Q ss_pred             ccccCCceeEeccCChhHHHHHHHHHhhcCchhhhhh-hhhhHHHHHHHHHHHHHHhhcCCCceehHHHHHHHHHHHHHH
Q 042142          109 YLTYGSADFSFAPYGPYWKFMKKLCMTQLLGGQTLNQ-FIPIRSEEIRRFMQLMLKKAKASEAVDVGKELIRLTNNVVSR  187 (376)
Q Consensus       109 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~  187 (376)
                      .+  |. +.++..+|+.|+++|+.+ .+.|+.+.++. +.+.+.+.++++++++.    .++++|+.+.+..++++++++
T Consensus       107 ~l--g~-~~~~~~~g~~w~~~R~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~~  178 (463)
T PLN02774        107 IL--GT-CNIAAVHGSTHRYMRGSL-LSLISPTMIRDHLLPKIDEFMRSHLSGWD----GLKTIDIQEKTKEMALLSALK  178 (463)
T ss_pred             Hh--Cc-cchhhcCCHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHHhhC----CCCCEEeeHHHHHHHHHHHHH
Confidence            22  21 224455799999999997 47888888875 67888887777777663    345799999999999999999


Q ss_pred             HHhCcccCCCchhHHHHHHHHHHHHhhhcCccccchhhhhhhhcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 042142          188 MTMGQICSNNDKEADEVRKLVQETAELTGKFNLQDYIWFCKNIDLQGFGKRLKEVRRKFDNMMERIIKEHQEARKINKER  267 (376)
Q Consensus       188 ~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  267 (376)
                      ++||.....   ....+.+.+.....  .....    +.  +++.. ..++..++.+.+.+++...++++++.     ..
T Consensus       179 ~~~g~~~~~---~~~~~~~~~~~~~~--~~~~~----~~--~lp~~-~~~~~~~~~~~~~~~~~~~i~~r~~~-----~~  241 (463)
T PLN02774        179 QIAGTLSKP---ISEEFKTEFFKLVL--GTLSL----PI--DLPGT-NYRSGVQARKNIVRMLRQLIQERRAS-----GE  241 (463)
T ss_pred             HHcCCCChH---HHHHHHHHHHHHhc--ccccC----Cc--CCCCh-hhhHHHHHHHHHHHHHHHHHHHHHhc-----CC
Confidence            999975431   11222222222110  11111    11  11111 12334455667777777777665321     11


Q ss_pred             CCCCCcccHHHHHhcccccCcccccCCHHHHHHHHHHHhhcCCcchHHHHHHHHHHHhhChHHHHHHHHHHhhhhCC---
Q 042142          268 GKDYAPMDLLDMLLDISEDESSEIKLTRENIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEIDSVVGK---  344 (376)
Q Consensus       268 ~~~~~~~dll~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~aG~dTTa~~l~~~l~~L~~~P~v~~~l~~Ei~~v~~~---  344 (376)
                          ...|+++.++... +  ++..++++++.+++.++++||+|||+++++|++++|++||++|+|+|+|++++.+.   
T Consensus       242 ----~~~d~l~~ll~~~-~--~~~~~s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~~~~~  314 (463)
T PLN02774        242 ----THTDMLGYLMRKE-G--NRYKLTDEEIIDQIITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRERKRP  314 (463)
T ss_pred             ----CcccHHHHHHhCc-c--CCCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhccCC
Confidence                2469999998632 2  12248999999999999999999999999999999999999999999999999863   


Q ss_pred             CCCCCcccCCCChhHHHHHHHHhccCCCCCC
Q 042142          345 SRLVEESDIINLPYLQALVKETLRLHPTGPM  375 (376)
Q Consensus       345 ~~~~~~~~l~~lpyl~avikEtlRl~p~~p~  375 (376)
                      ++.++++|+.+|||++|||||+||++|++|.
T Consensus       315 ~~~~~~~~l~~lpyl~a~ikE~lRl~P~v~~  345 (463)
T PLN02774        315 EDPIDWNDYKSMRFTRAVIFETSRLATIVNG  345 (463)
T ss_pred             CCCCCHHHHhcCcHHHHHHHHHHhcCCCCCC
Confidence            3467899999999999999999999999985


No 23 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=6.7e-45  Score=349.24  Aligned_cols=318  Identities=18%  Similarity=0.333  Sum_probs=229.0

Q ss_pred             ccccccc-CCCchHHHHHHHHhcCCeEEEecCCccEEEccCHHHHHHHHHhCCccccCCCCcccccccccCCceeEeccC
Q 042142           44 IGHLHLL-APIPHQALHKLSIRYGPLIHLFLGSVPCIVACSPETAKEILKTHETSFCDRPISATVDYLTYGSADFSFAPY  122 (376)
Q Consensus        44 lG~~~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~dp~~~~~il~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~  122 (376)
                      +||+..+ ++..+..+.++|++||||+++++|+.++|+++||+.+++|+.++...|.+++........ .+ .+ ++..+
T Consensus       142 ~G~l~~i~~g~~~~~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~~~-~g-~~-l~~~d  218 (633)
T PLN02738        142 KGSISAVRGEAFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILEFV-MG-KG-LIPAD  218 (633)
T ss_pred             cCcHHHhcCchHHHHHHHHHHHhCCEEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHHhhc-cC-Cc-eecCC
Confidence            3444344 455778899999999999999999999999999999999999776667654322111111 12 23 44567


Q ss_pred             ChhHHHHHHHHHhhcCchhhhhhhhhhHHHHHHHHHHHHHHhhcCCCceehHHHHHHHHHHHHHHHHhCcccCCCchhHH
Q 042142          123 GPYWKFMKKLCMTQLLGGQTLNQFIPIRSEEIRRFMQLMLKKAKASEAVDVGKELIRLTNNVVSRMTMGQICSNNDKEAD  202 (376)
Q Consensus       123 g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~fg~~~~~~~~~~~  202 (376)
                      |+.|+.+|+.+ .++|+.+.+..+++.+.++++++++++.+...+++++|+.+.+..+|+|||+.++||.+++...... 
T Consensus       219 ge~wr~rRr~l-~p~Fs~~~v~~l~~~i~~~v~~L~~~L~~~~~~g~~vdl~~~~~~lt~DVI~~~~FG~~~~~~~~~~-  296 (633)
T PLN02738        219 GEIWRVRRRAI-VPALHQKYVAAMISLFGQASDRLCQKLDAAASDGEDVEMESLFSRLTLDIIGKAVFNYDFDSLSNDT-  296 (633)
T ss_pred             cHHHHHHHHhc-cHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHHHHhCCCccccccch-
Confidence            99999999997 5889999999999999999999999998765667899999999999999999999999887432111 


Q ss_pred             HHHHHHHHHHhhhcCccccchh----hhhhhhcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-c---cCCCCCcc
Q 042142          203 EVRKLVQETAELTGKFNLQDYI----WFCKNIDLQGFGKRLKEVRRKFDNMMERIIKEHQEARKINK-E---RGKDYAPM  274 (376)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~---~~~~~~~~  274 (376)
                      .+...+..............++    |.++.+  +...+++.+..+.+..+...+++.+++..+... .   ........
T Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l--~~~~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~  374 (633)
T PLN02738        297 GIVEAVYTVLREAEDRSVSPIPVWEIPIWKDI--SPRQRKVAEALKLINDTLDDLIAICKRMVEEEELQFHEEYMNERDP  374 (633)
T ss_pred             HHHHHHHHHHHHHHHHhhcchhhhhhhHHhhh--chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhcccccccc
Confidence            1222222221111100011111    122211  122233444455555566665554433211100 0   00011235


Q ss_pred             cHHHHHhcccccCcccccCCHHHHHHHHHHHhhcCCcchHHHHHHHHHHHhhChHHHHHHHHHHhhhhCCCCCCCcccCC
Q 042142          275 DLLDMLLDISEDESSEIKLTRENIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEIDSVVGKSRLVEESDII  354 (376)
Q Consensus       275 dll~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~aG~dTTa~~l~~~l~~L~~~P~v~~~l~~Ei~~v~~~~~~~~~~~l~  354 (376)
                      |+++.+++..      ..++++++.++++++++||+||||++|+|++|+|++||++|+|+|+|+++++++ +.+++++++
T Consensus       375 dil~~Ll~~~------~~ls~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~~-~~~t~edL~  447 (633)
T PLN02738        375 SILHFLLASG------DDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLGD-RFPTIEDMK  447 (633)
T ss_pred             hHHHHHHHcC------CCCCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCC-CCCCHHHHc
Confidence            8999998642      137899999999999999999999999999999999999999999999999984 678999999


Q ss_pred             CChhHHHHHHHHhccCCCCCC
Q 042142          355 NLPYLQALVKETLRLHPTGPM  375 (376)
Q Consensus       355 ~lpyl~avikEtlRl~p~~p~  375 (376)
                      +||||+|||+|+||+||++|+
T Consensus       448 kLPYL~AVIkEtLRL~p~~p~  468 (633)
T PLN02738        448 KLKYTTRVINESLRLYPQPPV  468 (633)
T ss_pred             cCHHHHHHHHHHHhcCCCccc
Confidence            999999999999999999986


No 24 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=7.2e-45  Score=341.40  Aligned_cols=313  Identities=19%  Similarity=0.301  Sum_probs=235.2

Q ss_pred             cCCCCCCCCCCCCCCcccccccc-CCCchHHHHHHHHhcCCeEEEecCCccEEEccCHHHHHHHHHhCCccccCCCCccc
Q 042142           28 SKITSSLPPSPMALPIIGHLHLL-APIPHQALHKLSIRYGPLIHLFLGSVPCIVACSPETAKEILKTHETSFCDRPISAT  106 (376)
Q Consensus        28 ~~~~~~~ppgp~~~p~lG~~~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~dp~~~~~il~~~~~~f~~~~~~~~  106 (376)
                      ...+.+.||||+++|++||++++ ..+++..+.+++++||+++++++|+.++|+++||+++++++.++...|.  +....
T Consensus        30 ~~~~~~~Ppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~~~~vl~~~~~~~~--~~~~~  107 (463)
T PLN02196         30 SSTKLPLPPGTMGWPYVGETFQLYSQDPNVFFASKQKRYGSVFKTHVLGCPCVMISSPEAAKFVLVTKSHLFK--PTFPA  107 (463)
T ss_pred             CCCCCCCCCCCCCCCccchHHHHHhcCHHHHHHHHHHHhhhhheeeecCCceEEEcCHHHHHHHHhCCCCccc--ccCch
Confidence            44556789999999999998765 5788999999999999999999999999999999999999987766663  22221


Q ss_pred             ccccccCCceeEeccCChhHHHHHHHHHhhcCchhhhhhhhhhHHHHHHHHHHHHHHhhcCCCceehHHHHHHHHHHHHH
Q 042142          107 VDYLTYGSADFSFAPYGPYWKFMKKLCMTQLLGGQTLNQFIPIRSEEIRRFMQLMLKKAKASEAVDVGKELIRLTNNVVS  186 (376)
Q Consensus       107 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vd~~~~~~~~~~dvi~  186 (376)
                      ......|.. .++..+|+.|+++||.++ +.|+.+.+..+.+.+.+++.++++.|.     ++++|+.+.+..+++|+++
T Consensus       108 ~~~~~~g~~-~l~~~~g~~w~~~Rk~l~-~~f~~~~l~~~~~~i~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~v~~  180 (463)
T PLN02196        108 SKERMLGKQ-AIFFHQGDYHAKLRKLVL-RAFMPDAIRNMVPDIESIAQESLNSWE-----GTQINTYQEMKTYTFNVAL  180 (463)
T ss_pred             HHHHHcCcc-cccccCcHHHHHHHHHHH-HhcChHHHHHHHHHHHHHHHHHHHcCC-----CCeEEeHHHHHHHHHHHHH
Confidence            111112222 345567999999999975 678999999999999999988888763     3579999999999999999


Q ss_pred             HHHhCcccCCCchhHHHHHHHHHHHHhhhcCccccchhhhhhhhcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 042142          187 RMTMGQICSNNDKEADEVRKLVQETAELTGKFNLQDYIWFCKNIDLQGFGKRLKEVRRKFDNMMERIIKEHQEARKINKE  266 (376)
Q Consensus       187 ~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  266 (376)
                      .++||.+....   ...+........   ..+   ..+|+.  ++ ....++..++.+.+.+++..+++++++.     .
T Consensus       181 ~~~fG~~~~~~---~~~~~~~~~~~~---~~~---~~~~~~--~p-~~~~~~~~~a~~~~~~~~~~~i~~~~~~-----~  243 (463)
T PLN02196        181 LSIFGKDEVLY---REDLKRCYYILE---KGY---NSMPIN--LP-GTLFHKSMKARKELAQILAKILSKRRQN-----G  243 (463)
T ss_pred             HHHcCCCCchH---HHHHHHHHHHHh---cch---hccccc--CC-CccchHHHHHHHHHHHHHHHHHHHHhhc-----C
Confidence            99999864321   112222111111   001   111211  11 1112344555666777777777654321     1


Q ss_pred             cCCCCCcccHHHHHhcccccCcccccCCHHHHHHHHHHHhhcCCcchHHHHHHHHHHHhhChHHHHHHHHHHhhhhCC--
Q 042142          267 RGKDYAPMDLLDMLLDISEDESSEIKLTRENIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEIDSVVGK--  344 (376)
Q Consensus       267 ~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~aG~dTTa~~l~~~l~~L~~~P~v~~~l~~Ei~~v~~~--  344 (376)
                      .    ...|+++.+++..      ..++++++.++++++++||+|||+++++|++++|++||++|+|+++|++++.+.  
T Consensus       244 ~----~~~d~l~~ll~~~------~~l~~~ei~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~  313 (463)
T PLN02196        244 S----SHNDLLGSFMGDK------EGLTDEQIADNIIGVIFAARDTTASVLTWILKYLAENPSVLEAVTEEQMAIRKDKE  313 (463)
T ss_pred             C----CcccHHHHHHhcC------CCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccc
Confidence            1    2458999888531      248899999999999999999999999999999999999999999999998863  


Q ss_pred             -CCCCCcccCCCChhHHHHHHHHhccCCCCCCC
Q 042142          345 -SRLVEESDIINLPYLQALVKETLRLHPTGPMS  376 (376)
Q Consensus       345 -~~~~~~~~l~~lpyl~avikEtlRl~p~~p~~  376 (376)
                       ++.++++++++|||++|||+||||++|++|++
T Consensus       314 ~~~~~~~~~~~~l~yl~avi~EtlRl~p~~~~~  346 (463)
T PLN02196        314 EGESLTWEDTKKMPLTSRVIQETLRVASILSFT  346 (463)
T ss_pred             cCCCCCHHHHhcChHHHHHHHHHHhcCCCcccc
Confidence             35688999999999999999999999999863


No 25 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=5.9e-44  Score=338.97  Aligned_cols=321  Identities=22%  Similarity=0.359  Sum_probs=234.5

Q ss_pred             cCCCCCCCCCCCCCCcccccccc-----CCCchHHHHHHHHhcCC--eEEEecCCccEEEccCHHHHHHHHHhCCccccC
Q 042142           28 SKITSSLPPSPMALPIIGHLHLL-----APIPHQALHKLSIRYGP--LIHLFLGSVPCIVACSPETAKEILKTHETSFCD  100 (376)
Q Consensus        28 ~~~~~~~ppgp~~~p~lG~~~~~-----~~~~~~~~~~~~~~yG~--i~~~~~g~~~~v~i~dp~~~~~il~~~~~~f~~  100 (376)
                      ..++.++||||+++|++|+++.+     ..+++..+.+++++||+  ++++++|+.++|+++||+++++|+.++ +.|.+
T Consensus        37 ~~~~~~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~-~~f~~  115 (490)
T PLN02302         37 GEGQPPLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDD-DAFEP  115 (490)
T ss_pred             ccCCCCCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCC-Ccccc
Confidence            44556789999999999998765     24688899999999997  799999999999999999999999875 44544


Q ss_pred             CCCcccccccccCCceeEeccCChhHHHHHHHHHhhcC-chhhhhhhhhhHHHHHHHHHHHHHHhhcCCCceehHHHHHH
Q 042142          101 RPISATVDYLTYGSADFSFAPYGPYWKFMKKLCMTQLL-GGQTLNQFIPIRSEEIRRFMQLMLKKAKASEAVDVGKELIR  179 (376)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vd~~~~~~~  179 (376)
                      +........  .|. +.+...+|+.|+++|+.+. +.| +.+.++.+.+.+.+++.++++.+..    ++.+|+.+.+..
T Consensus       116 ~~~~~~~~~--~g~-~~~~~~~g~~w~~~R~~~~-~~f~~~~~l~~~~~~i~~~v~~~~~~~~~----~~~v~~~~~~~~  187 (490)
T PLN02302        116 GWPESTVEL--IGR-KSFVGITGEEHKRLRRLTA-APVNGPEALSTYIPYIEENVKSCLEKWSK----MGEIEFLTELRK  187 (490)
T ss_pred             CCchhHHHH--hcc-ccccccCcHHHHHHHHHHH-hccCCHHHHHHHHHHHHHHHHHHHHHhcC----CCCEehHHHHHH
Confidence            322211121  222 2233457999999999975 555 5778999999999999999988743    346999999999


Q ss_pred             HHHHHHHHHHhCcccCCCchhHHHHHHHHHHHHhhhcCccccchhhhhhhhcccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 042142          180 LTNNVVSRMTMGQICSNNDKEADEVRKLVQETAELTGKFNLQDYIWFCKNIDLQGFGKRLKEVRRKFDNMMERIIKEHQE  259 (376)
Q Consensus       180 ~~~dvi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  259 (376)
                      +++|++++++||.+++..   ...+...+.........  ....+|.      ..+ ++..+..+.+.+++...++++++
T Consensus       188 ~~~~vi~~~~~G~~~~~~---~~~~~~~~~~~~~~~~~--~~~~~p~------~~~-~~~~~~~~~l~~~~~~~i~~~~~  255 (490)
T PLN02302        188 LTFKIIMYIFLSSESELV---MEALEREYTTLNYGVRA--MAINLPG------FAY-HRALKARKKLVALFQSIVDERRN  255 (490)
T ss_pred             HHHHHHHHHHcCCCChHH---HHHHHHHHHHHHHHhhh--CCcCCCc------hhh-HHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999865421   12222222211111100  0001111      111 22234456677777777776654


Q ss_pred             HHHhhhccCCCCCcccHHHHHhcccccCcccccCCHHHHHHHHHHHhhcCCcchHHHHHHHHHHHhhChHHHHHHHHHHh
Q 042142          260 ARKINKERGKDYAPMDLLDMLLDISEDESSEIKLTRENIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEID  339 (376)
Q Consensus       260 ~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~aG~dTTa~~l~~~l~~L~~~P~v~~~l~~Ei~  339 (376)
                      ..+.   + ......|+++.+++...++  +..++++++..++.++++||+|||+++++|++++|++||++|+|+++|++
T Consensus       256 ~~~~---~-~~~~~~d~l~~ll~~~~~~--~~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E~~  329 (490)
T PLN02302        256 SRKQ---N-ISPRKKDMLDLLLDAEDEN--GRKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQE  329 (490)
T ss_pred             hhhc---c-CCCCcCCHHHHHHhhhccC--CCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence            3221   1 1113469999999753221  23589999999999999999999999999999999999999999999999


Q ss_pred             hhhCCC----CCCCcccCCCChhHHHHHHHHhccCCCCCC
Q 042142          340 SVVGKS----RLVEESDIINLPYLQALVKETLRLHPTGPM  375 (376)
Q Consensus       340 ~v~~~~----~~~~~~~l~~lpyl~avikEtlRl~p~~p~  375 (376)
                      ++.+..    ..++++++++|||++|||+|+||++|++|+
T Consensus       330 ~v~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~  369 (490)
T PLN02302        330 EIAKKRPPGQKGLTLKDVRKMEYLSQVIDETLRLINISLT  369 (490)
T ss_pred             HHHhcCCCCCCCCCHHHHhcChHHHHHHHHHHHhCCCccc
Confidence            998642    126889999999999999999999999986


No 26 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=2.9e-44  Score=339.32  Aligned_cols=331  Identities=19%  Similarity=0.304  Sum_probs=242.7

Q ss_pred             CCCCCCCCCCCcccccccc-----CCCchHHHHHHHHhcCCeEEEecCCccEEEccCHHHHHHHHHhCCccccCCCCccc
Q 042142           32 SSLPPSPMALPIIGHLHLL-----APIPHQALHKLSIRYGPLIHLFLGSVPCIVACSPETAKEILKTHETSFCDRPISAT  106 (376)
Q Consensus        32 ~~~ppgp~~~p~lG~~~~~-----~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~dp~~~~~il~~~~~~f~~~~~~~~  106 (376)
                      .++-.|..|||++|+-++.     ++.++..+.+|+++|||++++++|+.+.|+++||+++++|+++.+..|.+++....
T Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~   90 (489)
T PLN02936         11 NRLWGDDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAEV   90 (489)
T ss_pred             hccCCCCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhhh
Confidence            3456788999999987554     46788899999999999999999999999999999999999887677766532222


Q ss_pred             ccccccCCceeEeccCChhHHHHHHHHHhhcCchhhhhhhhh-hHHHHHHHHHHHHHHhhcCCCceehHHHHHHHHHHHH
Q 042142          107 VDYLTYGSADFSFAPYGPYWKFMKKLCMTQLLGGQTLNQFIP-IRSEEIRRFMQLMLKKAKASEAVDVGKELIRLTNNVV  185 (376)
Q Consensus       107 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~~~~~~~vd~~~~~~~~~~dvi  185 (376)
                      .... .+ .+ ++..+|+.|+++||.+ .+.|+.+.+..+.+ .+.++++.+++.+.+...++.++|+.+.+..+++|+|
T Consensus        91 ~~~~-~~-~~-i~~~~g~~wk~~Rk~l-~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vd~~~~~~~~~~dvi  166 (489)
T PLN02936         91 SEFL-FG-SG-FAIAEGELWTARRRAV-VPSLHRRYLSVMVDRVFCKCAERLVEKLEPVALSGEAVNMEAKFSQLTLDVI  166 (489)
T ss_pred             hHHH-hc-Cc-cccCCchHHHHHHHhh-cCccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHH
Confidence            1111 12 23 4456799999999997 57788878877654 7788999999999876555678999999999999999


Q ss_pred             HHHHhCcccCCCchhHHHHHHHHHHHHhhhcCccccchhhhhhh--h-cccchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 042142          186 SRMTMGQICSNNDKEADEVRKLVQETAELTGKFNLQDYIWFCKN--I-DLQGFGKRLKEVRRKFDNMMERIIKEHQEARK  262 (376)
Q Consensus       186 ~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  262 (376)
                      +.++||.+++..+.. .++...+......... .....+|++..  + ...+..+...++.+.+.+++..+++++++..+
T Consensus       167 ~~~~fG~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~l~~~~p~~~~~~~~~~~i~~~~~~~i~~~~~~~~  244 (489)
T PLN02936        167 GLSVFNYNFDSLTTD-SPVIQAVYTALKEAET-RSTDLLPYWKVDFLCKISPRQIKAEKAVTVIRETVEDLVDKCKEIVE  244 (489)
T ss_pred             HHHHcCCCccccccC-cHHHHHHHHHHHHHHH-hhhccchHHhhHHHhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999988753322 1222222222111111 11112222110  0 01112344556667777788777776554322


Q ss_pred             hhhccC--C---CCCcccHHHHHhcccccCcccccCCHHHHHHHHHHHhhcCCcchHHHHHHHHHHHhhChHHHHHHHHH
Q 042142          263 INKERG--K---DYAPMDLLDMLLDISEDESSEIKLTRENIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREE  337 (376)
Q Consensus       263 ~~~~~~--~---~~~~~dll~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~aG~dTTa~~l~~~l~~L~~~P~v~~~l~~E  337 (376)
                      ......  .   .....|+++.|+... +     .++++++.++++++++||+||||++++|++++|++||++|+|+|+|
T Consensus       245 ~~~~~~~~~~~~~~~~~d~l~~ll~~~-~-----~~~~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~p~~~~kl~~E  318 (489)
T PLN02936        245 AEGEVIEGEEYVNDSDPSVLRFLLASR-E-----EVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEALRKAQEE  318 (489)
T ss_pred             hcccccccccccccCchHHHHHHHhcc-c-----cCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence            111100  0   012358999988642 1     3789999999999999999999999999999999999999999999


Q ss_pred             HhhhhCCCCCCCcccCCCChhHHHHHHHHhccCCCCCC
Q 042142          338 IDSVVGKSRLVEESDIINLPYLQALVKETLRLHPTGPM  375 (376)
Q Consensus       338 i~~v~~~~~~~~~~~l~~lpyl~avikEtlRl~p~~p~  375 (376)
                      ++++++. +.++++++++||||+||||||||++||+|+
T Consensus       319 i~~~~~~-~~~~~~~~~~lpyl~avi~EtlRl~p~~~~  355 (489)
T PLN02936        319 LDRVLQG-RPPTYEDIKELKYLTRCINESMRLYPHPPV  355 (489)
T ss_pred             HHHHhcC-CCCCHHHHhhCHHHHHHHHHhhhcCCCccc
Confidence            9999885 457889999999999999999999999885


No 27 
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=6.1e-44  Score=334.54  Aligned_cols=321  Identities=20%  Similarity=0.243  Sum_probs=229.9

Q ss_pred             CCCCCCCCCCCCCCccccccccC-----CCchHHHHHHHHhcCCeEEEecCCccEEEccCHHHHHHHHHhCCccccCCCC
Q 042142           29 KITSSLPPSPMALPIIGHLHLLA-----PIPHQALHKLSIRYGPLIHLFLGSVPCIVACSPETAKEILKTHETSFCDRPI  103 (376)
Q Consensus        29 ~~~~~~ppgp~~~p~lG~~~~~~-----~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~dp~~~~~il~~~~~~f~~~~~  103 (376)
                      +++.++||||.++|++||++.+.     .+++.++.+++++||+||++++|+.+.|+++||++++++|.+++..|..+..
T Consensus         3 ~~~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~~   82 (452)
T PLN03141          3 KKKSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAYP   82 (452)
T ss_pred             CCCCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccCc
Confidence            45677899999999999998762     4688899999999999999999999999999999999999988777765432


Q ss_pred             cccccccccCCceeEeccCChhHHHHHHHHHhhcCchhhhhh-hhhhHHHHHHHHHHHHHHhhcCCCceehHHHHHHHHH
Q 042142          104 SATVDYLTYGSADFSFAPYGPYWKFMKKLCMTQLLGGQTLNQ-FIPIRSEEIRRFMQLMLKKAKASEAVDVGKELIRLTN  182 (376)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~l~~~~~~~~~vd~~~~~~~~~~  182 (376)
                      . ..... .|. +.++..+|+.|+++|+++. +.|+...+.. ..+.+.+.+.++++.+    ..+.++|+.+.+..+++
T Consensus        83 ~-~~~~l-~g~-~~~~~~~g~~wr~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~  154 (452)
T PLN03141         83 K-SLTEL-MGK-SSILLINGSLQRRVHGLIG-AFLKSPHLKAQITRDMERYVSESLDSW----RDDPPVLVQDETKKIAF  154 (452)
T ss_pred             h-hHHHH-hCc-ccccccCcHHHHHHHHHHH-HhcCcHHHHHHHHHHHHHHHHHHHHhc----cCCCCEEhHHHHHHHHH
Confidence            2 12222 222 2245567999999999874 5676665654 2344444444444433    33567999999999999


Q ss_pred             HHHHHHHhCcccCCCchhHHHHHHHHHHHHhhhcCccccchhhhhhhhcccchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 042142          183 NVVSRMTMGQICSNNDKEADEVRKLVQETAELTGKFNLQDYIWFCKNIDLQGFGKRLKEVRRKFDNMMERIIKEHQEARK  262 (376)
Q Consensus       183 dvi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  262 (376)
                      +++++++||.+.+.   ....+...+........  ....++|      ...+ ++..+..+.+.+++..+++++++..+
T Consensus       155 ~vi~~~~~G~~~~~---~~~~~~~~~~~~~~~~~--~~~~~~p------~~~~-~~~~~~~~~l~~~~~~~i~~~~~~~~  222 (452)
T PLN03141        155 EVLVKALISLEPGE---EMEFLKKEFQEFIKGLM--SLPIKLP------GTRL-YRSLQAKKRMVKLVKKIIEEKRRAMK  222 (452)
T ss_pred             HHHHHHHcCCCchH---HHHHHHHHHHHHhhhHH--hCccCCC------chHh-HHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999976532   12223232222221111  1111111      1111 22335567788888888877655432


Q ss_pred             hhhccCCCCCcccHHHHHhcccccCcccccCCHHHHHHHHHHHhhcCCcchHHHHHHHHHHHhhChHHHHHHHHHHhhhh
Q 042142          263 INKERGKDYAPMDLLDMLLDISEDESSEIKLTRENIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEIDSVV  342 (376)
Q Consensus       263 ~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~aG~dTTa~~l~~~l~~L~~~P~v~~~l~~Ei~~v~  342 (376)
                      .. .......+.|+++.+++..     +..++++++..+++++++||+|||+++++|++++|++||++|+|+++|++++.
T Consensus       223 ~~-~~~~~~~~~d~l~~ll~~~-----~~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~~~~  296 (452)
T PLN03141        223 NK-EEDETGIPKDVVDVLLRDG-----SDELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENMKLK  296 (452)
T ss_pred             cc-CccccCChhhHHHHHHhcC-----CCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHH
Confidence            10 0000012468999998753     12489999999999999999999999999999999999999999999999876


Q ss_pred             C----CCCCCCcccCCCChhHHHHHHHHhccCCCCCC
Q 042142          343 G----KSRLVEESDIINLPYLQALVKETLRLHPTGPM  375 (376)
Q Consensus       343 ~----~~~~~~~~~l~~lpyl~avikEtlRl~p~~p~  375 (376)
                      +    ..+.++.+++.+|||++|||+|+||+||++|.
T Consensus       297 ~~~~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~  333 (452)
T PLN03141        297 RLKADTGEPLYWTDYMSLPFTQNVITETLRMGNIING  333 (452)
T ss_pred             hccCCCCCCCCHHHHhccHHHHHHHHHHHhccCCcCC
Confidence            3    23457889999999999999999999999875


No 28 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=1.6e-42  Score=324.77  Aligned_cols=316  Identities=22%  Similarity=0.284  Sum_probs=225.7

Q ss_pred             cCCCCCCCCCCCCCCccccccccC-----CCchHHHHHHHHhcCCeEEEecCCccEEEccCHHHHHHHHHhCCccccCCC
Q 042142           28 SKITSSLPPSPMALPIIGHLHLLA-----PIPHQALHKLSIRYGPLIHLFLGSVPCIVACSPETAKEILKTHETSFCDRP  102 (376)
Q Consensus        28 ~~~~~~~ppgp~~~p~lG~~~~~~-----~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~dp~~~~~il~~~~~~f~~~~  102 (376)
                      ...+.++||||.++|++||++++.     .+++..+.+++++||+++++++|+.++|+++||+++++++.++...|.++.
T Consensus        25 ~~~~~~lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv~~pe~~~~il~~~~~~f~~~~  104 (472)
T PLN02987         25 RYRRMRLPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGSLFMTHLFGEPTVFSADPETNRFILQNEGKLFECSY  104 (472)
T ss_pred             ccCCCCCcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCCCeEEEeCHHHHHHHHhCCCceEEecC
Confidence            445567899999999999998762     457888999999999999999999999999999999999998877775543


Q ss_pred             CcccccccccCCceeEeccCChhHHHHHHHHHhhcCchhhhhhhhhhHHHHHHHHHHHHHHhhcCCCceehHHHHHHHHH
Q 042142          103 ISATVDYLTYGSADFSFAPYGPYWKFMKKLCMTQLLGGQTLNQFIPIRSEEIRRFMQLMLKKAKASEAVDVGKELIRLTN  182 (376)
Q Consensus       103 ~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vd~~~~~~~~~~  182 (376)
                      .......+  |..++ +..+|+.|+++|+++. ++++.+.+..+..   +++.++++......  +.++++.+.+.++++
T Consensus       105 ~~~~~~~l--g~~~l-~~~~g~~wr~~R~~~~-~f~~~~~~~~~~~---~~~~~~~~~~~~~~--~~~v~~~~~~~~~t~  175 (472)
T PLN02987        105 PGSISNLL--GKHSL-LLMKGNLHKKMHSLTM-SFANSSIIKDHLL---LDIDRLIRFNLDSW--SSRVLLMEEAKKITF  175 (472)
T ss_pred             cHHHHHHh--Ccccc-cccCcHHHHHHHHHHH-HhcChHHHHHHHH---HHHHHHHHHHHHhh--ccceehHHHHHHHHH
Confidence            22222222  22233 3447999999999964 5544444444331   22333333322221  136999999999999


Q ss_pred             HHHHHHHhCcccCCCchhHHHHHHHHHHHHhhhcCccccchhhhhhhhcccchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 042142          183 NVVSRMTMGQICSNNDKEADEVRKLVQETAELTGKFNLQDYIWFCKNIDLQGFGKRLKEVRRKFDNMMERIIKEHQEARK  262 (376)
Q Consensus       183 dvi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  262 (376)
                      |++++++||.+.+..   .+.+.+.+......   + ...++|++    . ...++..+..+.+.+++..+++++++...
T Consensus       176 ~vi~~~~fg~~~~~~---~~~~~~~~~~~~~~---~-~~~~~p~l----~-~~~~~~~~~~~~~~~~~~~~i~~r~~~~~  243 (472)
T PLN02987        176 ELTVKQLMSFDPGEW---TESLRKEYVLVIEG---F-FSVPLPLF----S-TTYRRAIQARTKVAEALTLVVMKRRKEEE  243 (472)
T ss_pred             HHHHHHHcCCCChHH---HHHHHHHHHHHHhh---h-hcCCCcCC----C-chHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence            999999999765321   12222222221111   1 11122321    1 12344556677788888888877654322


Q ss_pred             hhhccCCCCCcccHHHHHhcccccCcccccCCHHHHHHHHHHHhhcCCcchHHHHHHHHHHHhhChHHHHHHHHHHhhhh
Q 042142          263 INKERGKDYAPMDLLDMLLDISEDESSEIKLTRENIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEIDSVV  342 (376)
Q Consensus       263 ~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~aG~dTTa~~l~~~l~~L~~~P~v~~~l~~Ei~~v~  342 (376)
                      .   +.  ....|+++.+++.. +     .++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++.
T Consensus       244 ~---~~--~~~~d~l~~ll~~~-~-----~~~~~ei~~~~~~l~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~E~~~~~  312 (472)
T PLN02987        244 E---GA--EKKKDMLAALLASD-D-----GFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKIR  312 (472)
T ss_pred             c---cC--cccccHHHHHHhcC-C-----CCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHHhChHHHHHHHHHHHHHH
Confidence            1   10  12469999999652 1     389999999999999999999999999999999999999999999999987


Q ss_pred             C---CCCCCCcccCCCChhHHHHHHHHhccCCCCCC
Q 042142          343 G---KSRLVEESDIINLPYLQALVKETLRLHPTGPM  375 (376)
Q Consensus       343 ~---~~~~~~~~~l~~lpyl~avikEtlRl~p~~p~  375 (376)
                      +   +...++++++.+|||++||++|+||++|++|.
T Consensus       313 ~~~~~~~~~~~~~l~~lpyl~a~i~EtLRl~p~~~~  348 (472)
T PLN02987        313 AMKSDSYSLEWSDYKSMPFTQCVVNETLRVANIIGG  348 (472)
T ss_pred             cccCCCCCCCHHHHhcChHHHHHHHHHHHccCCcCC
Confidence            5   23457889999999999999999999999874


No 29 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=6.1e-41  Score=316.49  Aligned_cols=313  Identities=20%  Similarity=0.291  Sum_probs=224.0

Q ss_pred             CCccccccccCCCchHHHHHHHHhcC-CeEEEecCCccEEEccCHHHHHHHHHhCCccccCCCCc-ccccccccCCceeE
Q 042142           41 LPIIGHLHLLAPIPHQALHKLSIRYG-PLIHLFLGSVPCIVACSPETAKEILKTHETSFCDRPIS-ATVDYLTYGSADFS  118 (376)
Q Consensus        41 ~p~lG~~~~~~~~~~~~~~~~~~~yG-~i~~~~~g~~~~v~i~dp~~~~~il~~~~~~f~~~~~~-~~~~~~~~~~~~~~  118 (376)
                      .++.|+......+..+.+..+.++|+ ..++++..+.  ++++||+++++|+..+...|.+.... ...... .| .+ +
T Consensus        49 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~~-~g-~g-i  123 (502)
T PLN02426         49 AYLTASWAKDFDNLCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILGDL-LG-RG-I  123 (502)
T ss_pred             CCccHHHHHhcccHHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHHHh-cC-Cc-e
Confidence            45777765543445667767888887 5777766554  89999999999999776667543321 111111 12 23 5


Q ss_pred             eccCChhHHHHHHHHHhhcCchhhhhhhh--hhHHHHHHHHHHHHHHhhc--CCCceehHHHHHHHHHHHHHHHHhCccc
Q 042142          119 FAPYGPYWKFMKKLCMTQLLGGQTLNQFI--PIRSEEIRRFMQLMLKKAK--ASEAVDVGKELIRLTNNVVSRMTMGQIC  194 (376)
Q Consensus       119 ~~~~g~~w~~~R~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~l~~~~~--~~~~vd~~~~~~~~~~dvi~~~~fg~~~  194 (376)
                      ++.+|+.|+.+||.+ ++.|+.+.++.+.  +.+.+.++++++.+.+..+  .+.++|+.+++.++|+|+|+.++||.++
T Consensus       124 ~~~~g~~wk~~Rk~l-~~~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~~  202 (502)
T PLN02426        124 FNVDGDSWRFQRKMA-SLELGSVSIRSYAFEIVASEIESRLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFSFGLDP  202 (502)
T ss_pred             eecCcHHHHHHHHHh-HhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEcHHHHHHHHHHHHHHHHHhCCCC
Confidence            667899999999997 6888888888763  6777888888888876542  2467999999999999999999999987


Q ss_pred             CCCch--hHHHHHHHHHHHHhhhcC--ccccchhhhhhhhcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC
Q 042142          195 SNNDK--EADEVRKLVQETAELTGK--FNLQDYIWFCKNIDLQGFGKRLKEVRRKFDNMMERIIKEHQEARKINKERGKD  270 (376)
Q Consensus       195 ~~~~~--~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  270 (376)
                      +..+.  ...++...++........  .....+++.+..+...+..+++.+..+.+.+++..+++++++..    ..   
T Consensus       203 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~----~~---  275 (502)
T PLN02426        203 GCLELSLPISEFADAFDTASKLSAERAMAASPLLWKIKRLLNIGSERKLKEAIKLVDELAAEVIRQRRKLG----FS---  275 (502)
T ss_pred             cccCCCCCccHHHHHHHHHHHHHHHHHhcchhHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHhcc----cC---
Confidence            64331  223444444433221110  11111122121111112345566677778888888887764321    11   


Q ss_pred             CCcccHHHHHhcccccCcccccCCHHHHHHHHHHHhhcCCcchHHHHHHHHHHHhhChHHHHHHHHHHhhhhCCC-CCCC
Q 042142          271 YAPMDLLDMLLDISEDESSEIKLTRENIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEIDSVVGKS-RLVE  349 (376)
Q Consensus       271 ~~~~dll~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~aG~dTTa~~l~~~l~~L~~~P~v~~~l~~Ei~~v~~~~-~~~~  349 (376)
                       ...|+++.+++..        .+++++.+++.++++||+||||++++|++|+|++||++|+|+|+|++++.+.+ ..++
T Consensus       276 -~~~dll~~ll~~~--------~~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~t  346 (502)
T PLN02426        276 -ASKDLLSRFMASI--------NDDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGPNQEAAS  346 (502)
T ss_pred             -CcchHHHHHHhcC--------CCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCCC
Confidence             2469999998642        25788999999999999999999999999999999999999999999998853 3689


Q ss_pred             cccCCCChhHHHHHHHHhccCCCCCC
Q 042142          350 ESDIINLPYLQALVKETLRLHPTGPM  375 (376)
Q Consensus       350 ~~~l~~lpyl~avikEtlRl~p~~p~  375 (376)
                      ++|+++||||+|||+|+||++||+|.
T Consensus       347 ~~~l~~LpYl~avi~EtLRl~p~v~~  372 (502)
T PLN02426        347 FEEMKEMHYLHAALYESMRLFPPVQF  372 (502)
T ss_pred             HHHHhcChHHHHHHHHHHhCCCCCCC
Confidence            99999999999999999999999985


No 30 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=8.3e-37  Score=284.55  Aligned_cols=317  Identities=15%  Similarity=0.145  Sum_probs=207.4

Q ss_pred             CCCCCCCCCCCCcccccccc-----CCCchHHHHHHHHhcCC-eEEEecCCccE-------EEccCHHHHHHHHHh----
Q 042142           31 TSSLPPSPMALPIIGHLHLL-----APIPHQALHKLSIRYGP-LIHLFLGSVPC-------IVACSPETAKEILKT----   93 (376)
Q Consensus        31 ~~~~ppgp~~~p~lG~~~~~-----~~~~~~~~~~~~~~yG~-i~~~~~g~~~~-------v~i~dp~~~~~il~~----   93 (376)
                      +.+.|||+.++|++|...++     ..++..++.+.++|||+ ||+++++|.|+       |+++||++++.+|..    
T Consensus        15 ~~~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~~~   94 (480)
T PLN02648         15 PLREIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSKVD   94 (480)
T ss_pred             CCCCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchhcc
Confidence            34569999999999998653     35567899999999999 99999988666       999999999999974    


Q ss_pred             CCccccCCCCcccccccccCCceeEeccCChhHHHHHHHHHhhcCchhhhhhhhhhHHHHHHHHHHHHHHhhcCCCceeh
Q 042142           94 HETSFCDRPISATVDYLTYGSADFSFAPYGPYWKFMKKLCMTQLLGGQTLNQFIPIRSEEIRRFMQLMLKKAKASEAVDV  173 (376)
Q Consensus        94 ~~~~f~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vd~  173 (376)
                      ++..|.+.. ......++.+....++..+|+.|+++||++. +.|+ ..++.+.+.|.+++.++++.|......+.++|+
T Consensus        95 ~~~~~~~~~-~~~~~l~G~~~~~s~~~~~g~~H~r~Rrll~-~~f~-~~~~~~~~~m~~~~~~~~~~w~~~~~~~~~vdv  171 (480)
T PLN02648         95 KRDVFTGTY-MPSTAFTGGYRVLSYLDPSEPKHAKLKSFLF-ELLK-SRHRRFIPEFRAAFAELFDTWEAELAKKGKAEF  171 (480)
T ss_pred             ccccceeee-ccCccccCCceeeeecCCCCchHHHHHHHHH-HHHH-HhhhhhhhHHHHHHHHHHHHHHHHHhhCCCccc
Confidence            344444321 1222322211111455677999999999975 7788 467889999999999999999654334557999


Q ss_pred             HHHHHHHHHHHHHHHHhCcccCCCchhHHHHHHHHHHHHhhhcCccccchhhhhhhhcccchhHHHHHHHHHHHHHHHHH
Q 042142          174 GKELIRLTNNVVSRMTMGQICSNNDKEADEVRKLVQETAELTGKFNLQDYIWFCKNIDLQGFGKRLKEVRRKFDNMMERI  253 (376)
Q Consensus       174 ~~~~~~~~~dvi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (376)
                      .+.+..+|+|++++++||.+.+... -.+.+...........       .+|..+. .++   ..+.+........-...
T Consensus       172 ~~~~~~lt~~vi~~~lfG~~~~~~~-l~~~~~~~~~~~~~~~-------~~p~~~~-~l~---~~~~~~i~~~~~~~~~~  239 (480)
T PLN02648        172 NDPLDQMAFNFLCKALTGKDPSETA-LGSDGPALIQKWLALQ-------LAPLAST-GLP---HVLEELLLHTFPLPFFL  239 (480)
T ss_pred             cchHHHHHHHHHHHHHcCCCcchhh-hccchhHHHHHHHHHH-------hhHHHHc-Cch---HHHHHHhhcccCCchhh
Confidence            9999999999999999998655310 0011111111110000       0010000 000   00000000000000000


Q ss_pred             HH-HHHHHHHhhhccCCCCCcccHHHHHhcccccCcccccCCHHHHHHHHHH-HhhcCCcchHHHHHHHHHHHhhChH-H
Q 042142          254 IK-EHQEARKINKERGKDYAPMDLLDMLLDISEDESSEIKLTRENIKAFILD-IFAAGTDTSAITVEWALAELINHPD-M  330 (376)
Q Consensus       254 i~-~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~l~~~~~~-~~~aG~dTTa~~l~~~l~~L~~~P~-v  330 (376)
                      .. .+++..+.         -.+..+.+++...+    ..++++++.++++. +.++|++||+++++|++|+|++||+ +
T Consensus       240 ~~~~~~~~~~~---------~~~~~~~ll~~~~~----~~l~~~ei~~~~l~~~~~~t~~~~~~~l~~~l~~L~~~p~~v  306 (480)
T PLN02648        240 VKSDYDKLYDF---------FRASATEALDLAEK----FGISREEALHNLLFVLGFNAFGGFKIFFPALLKWVGRAGEEL  306 (480)
T ss_pred             hhccHHHHHHH---------HHHHHHHHHHHHHh----cCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCCHHH
Confidence            00 00000000         00112233322111    13899999999875 4466778888899999999999995 9


Q ss_pred             HHHHHHHHhhhhCC-CCCCCcccCCCChhHHHHHHHHhccCCCCCC
Q 042142          331 MKKAREEIDSVVGK-SRLVEESDIINLPYLQALVKETLRLHPTGPM  375 (376)
Q Consensus       331 ~~~l~~Ei~~v~~~-~~~~~~~~l~~lpyl~avikEtlRl~p~~p~  375 (376)
                      |+|+++|++++.+. ++.++++++++|||++|||+|+||++|++|.
T Consensus       307 ~~klr~Ei~~~~~~~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~  352 (480)
T PLN02648        307 QARLAEEVRSAVKAGGGGVTFAALEKMPLVKSVVYEALRIEPPVPF  352 (480)
T ss_pred             HHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhhcCCccc
Confidence            99999999999863 3568999999999999999999999999986


No 31 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=4.3e-35  Score=255.75  Aligned_cols=318  Identities=21%  Similarity=0.310  Sum_probs=222.6

Q ss_pred             CCCCCCCC-CCccccccccCCCchHHHHHHHHhcCCeEEEecCCccEEEccCHHHHHHHHHhCCccccCCCCc-cccccc
Q 042142           33 SLPPSPMA-LPIIGHLHLLAPIPHQALHKLSIRYGPLIHLFLGSVPCIVACSPETAKEILKTHETSFCDRPIS-ATVDYL  110 (376)
Q Consensus        33 ~~ppgp~~-~p~lG~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~dp~~~~~il~~~~~~f~~~~~~-~~~~~~  110 (376)
                      ..||.-.+ .|++|....++++|..++++..+|||+||++.++|+.+.++.||+....++..+....+-.... ..... 
T Consensus        31 ~~PPli~gwiP~lG~a~~fgk~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~~~l~~~-  109 (486)
T KOG0684|consen   31 KEPPLIKGWIPWLGSALAFGKDPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAYSKLTTP-  109 (486)
T ss_pred             CCCcccccCcchhhHHHHhccCHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHHHHHhhhh-
Confidence            56776655 5999999999999999999999999999999999999999999999999998763322211100 11111 


Q ss_pred             ccCCceeEeccCChhHHHHHHHHHhhcCchhhhhhhhhhHHHHHHHHHHH-HHHhhcCCCceehHHHHHHHHHHHHHHHH
Q 042142          111 TYGSADFSFAPYGPYWKFMKKLCMTQLLGGQTLNQFIPIRSEEIRRFMQL-MLKKAKASEAVDVGKELIRLTNNVVSRMT  189 (376)
Q Consensus       111 ~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-l~~~~~~~~~vd~~~~~~~~~~dvi~~~~  189 (376)
                      .+| .++.+...++....+.+++. ..++...++++.+.|.+++...++. +.+   +|.+-.+.+....+++.+--.+.
T Consensus       110 vFg-~~v~~d~~~~~~~e~~~~~k-~~L~~~~lk~~~e~m~~el~~~f~~~~~~---s~~~d~l~~~~~~ii~tAs~~ll  184 (486)
T KOG0684|consen  110 VFG-KGVVYDVPNHVMMEQKKFFK-SALGGVALKSLVELMLEELHAYFETSLGE---SGETDGLYTFCRLIIFTASRLLL  184 (486)
T ss_pred             hcC-CCccccCCCchHHHHHHHHH-HHhchhhHHHHHHHHHHHHHHHHhccccc---ccchhHhhhhhHHHhhhhHHHhh
Confidence            122 23455555667777777764 5567788999999999999988887 322   33333344444444444444444


Q ss_pred             hCcccCCCchhHHHHHHHHHHHHhhhcCccccchhhhhhhhcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 042142          190 MGQICSNNDKEADEVRKLVQETAELTGKFNLQDYIWFCKNIDLQGFGKRLKEVRRKFDNMMERIIKEHQEARKINKERGK  269 (376)
Q Consensus       190 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  269 (376)
                      ||+.-...+   +.......+.......+.  ..+|.  .++++..++ ..++++.+.+.+...+.++++..+    +  
T Consensus       185 ~~e~r~~~d---~~~a~l~~dLd~~F~~~d--~~FP~--~LP~~~~r~-~~ra~~~i~k~f~~~i~~rr~s~s----~--  250 (486)
T KOG0684|consen  185 GGEVRDQLD---ADVAKLYHDLDQGFQPFD--FLFPY--NLPIPLLRR-RDRARKKISKIFSKIILDRRASIS----K--  250 (486)
T ss_pred             hhhhhhhhc---chHHHHHHHHhccccchH--hhccc--CCCcchhhh-HHHHHHHHHHHHHHHHHHHHhccc----c--
Confidence            444322212   222333333332222211  11231  222333333 346677777888777766554321    1  


Q ss_pred             CCCcccHHHHHhcccccCcccccCCHHHHHHHHHHHhhcCCcchHHHHHHHHHHHhhChHHHHHHHHHHhhhhCCCCC-C
Q 042142          270 DYAPMDLLDMLLDISEDESSEIKLTRENIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEIDSVVGKSRL-V  348 (376)
Q Consensus       270 ~~~~~dll~~ll~~~~~~~~~~~l~~~~l~~~~~~~~~aG~dTTa~~l~~~l~~L~~~P~v~~~l~~Ei~~v~~~~~~-~  348 (376)
                        ...|++..+++...   ++...+++++....+.+++||..||+.|..|++++|++|||+++.+++|+++|+|.+.. +
T Consensus       251 --~~~dmlq~l~~~y~---dg~~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~~~~~l  325 (486)
T KOG0684|consen  251 --WDNDMLQSLMEKYK---DGRPTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGEKKEKL  325 (486)
T ss_pred             --ccHHHHHHHHHHhh---cCCcCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccCCCC
Confidence              23488888887222   23468999999999999999999999999999999999999999999999999998655 8


Q ss_pred             CcccCCCChhHHHHHHHHhccCCCCCC
Q 042142          349 EESDIINLPYLQALVKETLRLHPTGPM  375 (376)
Q Consensus       349 ~~~~l~~lpyl~avikEtlRl~p~~p~  375 (376)
                      +++++++||.|+.||+|||||+||.+.
T Consensus       326 ~~d~L~~lplL~~~IkEtLRL~~p~~~  352 (486)
T KOG0684|consen  326 TYDQLKDLPLLDSCIKETLRLHPPAHS  352 (486)
T ss_pred             CHHHHhcchHHHHHHHHHHhcCCchhh
Confidence            999999999999999999999998764


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.97  E-value=8.1e-29  Score=228.12  Aligned_cols=270  Identities=24%  Similarity=0.332  Sum_probs=198.6

Q ss_pred             chHHHHHHHHhcCCeEEEecCCcc--EEEccCHHHHHHHHHhCCccccCCCCcccc---cccccCCceeEeccCChhHHH
Q 042142           54 PHQALHKLSIRYGPLIHLFLGSVP--CIVACSPETAKEILKTHETSFCDRPISATV---DYLTYGSADFSFAPYGPYWKF  128 (376)
Q Consensus        54 ~~~~~~~~~~~yG~i~~~~~g~~~--~v~i~dp~~~~~il~~~~~~f~~~~~~~~~---~~~~~~~~~~~~~~~g~~w~~  128 (376)
                      +......+.+.||+++.+...+..  .+++++++.+++++.++. .++........   .....|. +.+...+|+.|.+
T Consensus        24 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~ll~~dg~~H~r  101 (411)
T COG2124          24 PRFFLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPVLGD-GSLLTLDGPEHTR  101 (411)
T ss_pred             hhhhHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcc-cccccccccccccchhhhccc-cceeecCCHHHHH
Confidence            344566778889999888776554  799999999999999864 12221111111   1111222 2255678999999


Q ss_pred             HHHHHHhhcCchhhhhhhhhhHHHHHHHHHHHHHHhhcCCCceehHHHHHHHHHHHHHHHHhCcccCCCchhHHHHHHHH
Q 042142          129 MKKLCMTQLLGGQTLNQFIPIRSEEIRRFMQLMLKKAKASEAVDVGKELIRLTNNVVSRMTMGQICSNNDKEADEVRKLV  208 (376)
Q Consensus       129 ~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~fg~~~~~~~~~~~~~~~~~  208 (376)
                      +||++ .+.|+++.++.+.+.+.+.+.++++.+ .  .. ...++.+.+..+++++|+ .+||.+.+..    .......
T Consensus       102 ~Rkl~-~~~F~~~~~~~~~~~i~~~~~~~~~~~-~--~~-~~~~v~~~a~~l~~~vi~-~l~Gv~~~~~----~~~~~~~  171 (411)
T COG2124         102 LRKLL-APAFTPRALRGYRPLIREIADRLLDDL-W--QG-GADLVLDFAAELTLRVIA-ELLGVPLEDR----PQLLRWS  171 (411)
T ss_pred             HHHHh-ccccCHHHHHHHHHHHHHHHHHHHHhc-c--cC-CchhHHHHhhhhhHHHHH-HHhCCCHHHH----HHHHHHH
Confidence            99997 588999999999999999999999998 3  22 678899999999999999 9999876532    1222222


Q ss_pred             HHHHhhhcCccccchhhhhhhhcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccHHHHHhcccccCc
Q 042142          209 QETAELTGKFNLQDYIWFCKNIDLQGFGKRLKEVRRKFDNMMERIIKEHQEARKINKERGKDYAPMDLLDMLLDISEDES  288 (376)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~  288 (376)
                      ......   ..     +..   .......+..++.+.+.+++..++++++.       .    ..+|+++.++....++ 
T Consensus       172 ~~~~~~---~~-----~~~---~~~~~~~~~~~a~~~~~~~~~~li~~rR~-------~----~~~dlls~l~~a~~~~-  228 (411)
T COG2124         172 DALLLR---LD-----PDL---GPEEPWRRARAARRELDAYLRALIAERRA-------A----PRDDLLSLLLSAEDDG-  228 (411)
T ss_pred             HHHHhc---cC-----ccc---CCcccHHHHHHHHHHHHHHHHHHHHHhcc-------C----CcccHHHHHHHHhhCC-
Confidence            221111   00     110   01111234566677888898888887651       1    3469999999764332 


Q ss_pred             ccccCCHHHHHHHHHHHhhcCCcchHHHHHHHHHHHhhChHHHHHHHHHHhhhhCCCCCCCcccCCCChhHHHHHHHHhc
Q 042142          289 SEIKLTRENIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEIDSVVGKSRLVEESDIINLPYLQALVKETLR  368 (376)
Q Consensus       289 ~~~~l~~~~l~~~~~~~~~aG~dTTa~~l~~~l~~L~~~P~v~~~l~~Ei~~v~~~~~~~~~~~l~~lpyl~avikEtlR  368 (376)
                       +..++++||.++++++++||+|||+++|+|++|.|++||++++++++|.+.                ||++++++|+||
T Consensus       229 -~~~lsd~Ei~~~~~~ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~~----------------~~~~~~v~E~LR  291 (411)
T COG2124         229 -GGRLSDDEIRDELITLLVAGHETTANALAWALYALLRHPDQLAKLRAEPDR----------------PLLEAVVEETLR  291 (411)
T ss_pred             -CCcCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcch----------------HHHHHHHHHHHH
Confidence             226999999999999999999999999999999999999999999999765                999999999999


Q ss_pred             cCCCCCC
Q 042142          369 LHPTGPM  375 (376)
Q Consensus       369 l~p~~p~  375 (376)
                      +|||++.
T Consensus       292 ~~ppv~~  298 (411)
T COG2124         292 LYPPVPL  298 (411)
T ss_pred             hCCchhc
Confidence            9999975


No 33 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=79.42  E-value=7.7  Score=23.54  Aligned_cols=44  Identities=18%  Similarity=0.280  Sum_probs=37.9

Q ss_pred             HHHHHHHHHHhhcCCcchHHHHHHHHHHHhhChHHHHHHHHHHh
Q 042142          296 ENIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEID  339 (376)
Q Consensus       296 ~~l~~~~~~~~~aG~dTTa~~l~~~l~~L~~~P~v~~~l~~Ei~  339 (376)
                      -+++..+..++-.|.|..+..++..+....-||+....+-+|++
T Consensus         5 ~d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~elr   48 (48)
T PF12554_consen    5 LDVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKELR   48 (48)
T ss_pred             HHHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHhC
Confidence            35677788888899999999999999999999999999988863


No 34 
>KOG0114 consensus Predicted RNA-binding protein (RRM superfamily) [General function prediction only]
Probab=73.97  E-value=12  Score=26.92  Aligned_cols=61  Identities=21%  Similarity=0.289  Sum_probs=41.5

Q ss_pred             CCCCCCCCCCCCccccccccCCCchHHHHHHHHhcCCeEEEecC------CccEEEccCHHHHHHHHHh
Q 042142           31 TSSLPPSPMALPIIGHLHLLAPIPHQALHKLSIRYGPLIHLFLG------SVPCIVACSPETAKEILKT   93 (376)
Q Consensus        31 ~~~~ppgp~~~p~lG~~~~~~~~~~~~~~~~~~~yG~i~~~~~g------~~~~v~i~dp~~~~~il~~   93 (376)
                      +.++||--..+-++-|++.  .-..+-+.+++-+||+|..+++|      |.-.||-.|...++.....
T Consensus        10 ~~rlppevnriLyirNLp~--~ITseemydlFGkyg~IrQIRiG~~k~TrGTAFVVYedi~dAk~A~dh   76 (124)
T KOG0114|consen   10 NIRLPPEVNRILYIRNLPF--KITSEEMYDLFGKYGTIRQIRIGNTKETRGTAFVVYEDIFDAKKACDH   76 (124)
T ss_pred             CCCCChhhheeEEEecCCc--cccHHHHHHHhhcccceEEEEecCccCcCceEEEEehHhhhHHHHHHH
Confidence            3455655555555555532  12246678899999999999987      3456777788888887764


No 35 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=57.72  E-value=10  Score=23.91  Aligned_cols=24  Identities=25%  Similarity=0.571  Sum_probs=18.7

Q ss_pred             HHHHHhhChHHHHHHHHHHhhhhC
Q 042142          320 ALAELINHPDMMKKAREEIDSVVG  343 (376)
Q Consensus       320 ~l~~L~~~P~v~~~l~~Ei~~v~~  343 (376)
                      .+.||.+||++.+++.+-=.+.+|
T Consensus         5 iV~YLv~nPevl~kl~~g~asLIG   28 (57)
T PF05952_consen    5 IVNYLVQNPEVLEKLKEGEASLIG   28 (57)
T ss_pred             HHHHHHHChHHHHHHHcCCeeEec
Confidence            578999999999999875444444


No 36 
>PHA03049 IMV membrane protein; Provisional
Probab=54.17  E-value=58  Score=21.15  Aligned_cols=37  Identities=19%  Similarity=0.366  Sum_probs=19.3

Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCcccc
Q 042142           10 LFLVWLVSTILVRSIFRRSKITSSLPPSPMALPIIGH   46 (376)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~ppgp~~~p~lG~   46 (376)
                      ..++..+++++++.++++...+...||.|...+-.-+
T Consensus         8 ~iICVaIi~lIvYgiYnkk~~~q~~~p~~e~ye~~e~   44 (68)
T PHA03049          8 VIICVVIIGLIVYGIYNKKTTTSQNPPSQEKYEKMED   44 (68)
T ss_pred             HHHHHHHHHHHHHHHHhcccccCCCCCChhhccCchh
Confidence            3344445555666667665555555555444444443


No 37 
>PF13893 RRM_5:  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PDB: 2PE8_A 2PEH_A 2D9O_A 1A9N_D 2DIT_A 3S6E_A 2LQ5_A 1SJQ_A 2AD9_A 1X4D_A ....
Probab=52.37  E-value=40  Score=20.77  Aligned_cols=35  Identities=20%  Similarity=0.260  Sum_probs=25.2

Q ss_pred             HHHHHHhcCCeEEEecCC----ccEEEccCHHHHHHHHH
Q 042142           58 LHKLSIRYGPLIHLFLGS----VPCIVACSPETAKEILK   92 (376)
Q Consensus        58 ~~~~~~~yG~i~~~~~g~----~~~v~i~dp~~~~~il~   92 (376)
                      +.++.++||+|-.+.+..    .-.|-..+++.++.+..
T Consensus         1 L~~~f~~fG~V~~i~~~~~~~~~a~V~f~~~~~A~~a~~   39 (56)
T PF13893_consen    1 LYKLFSKFGEVKKIKIFKKKRGFAFVEFASVEDAQKAIE   39 (56)
T ss_dssp             HHHHHTTTS-EEEEEEETTSTTEEEEEESSHHHHHHHHH
T ss_pred             ChHHhCCcccEEEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence            357789999998887643    23555669999998886


No 38 
>PF15300 INT_SG_DDX_CT_C:  INTS6/SAGE1/DDX26B/CT45 C-terminus
Probab=44.94  E-value=11  Score=24.65  Aligned_cols=16  Identities=19%  Similarity=0.528  Sum_probs=13.7

Q ss_pred             CChhHHHHHHHHhccC
Q 042142          355 NLPYLQALVKETLRLH  370 (376)
Q Consensus       355 ~lpyl~avikEtlRl~  370 (376)
                      +..+++.||+|++|+.
T Consensus        39 r~~fv~~~IkEA~RFk   54 (65)
T PF15300_consen   39 RKQFVEMIIKEAARFK   54 (65)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            5678999999999973


No 39 
>COG0851 MinE Septum formation topological specificity factor [Cell division and chromosome partitioning]
Probab=44.42  E-value=38  Score=23.54  Aligned_cols=18  Identities=39%  Similarity=0.693  Sum_probs=15.8

Q ss_pred             ChHHHHHHHHHHhhhhCC
Q 042142          327 HPDMMKKAREEIDSVVGK  344 (376)
Q Consensus       327 ~P~v~~~l~~Ei~~v~~~  344 (376)
                      .|+..+.+|+||.+|+.+
T Consensus        35 ~pd~l~~Lr~eIl~VI~K   52 (88)
T COG0851          35 QPDYLEQLRKEILEVISK   52 (88)
T ss_pred             CcchHHHHHHHHHHHHHH
Confidence            489999999999999854


No 40 
>PF14129 DUF4296:  Domain of unknown function (DUF4296)
Probab=43.58  E-value=1e+02  Score=21.32  Aligned_cols=48  Identities=4%  Similarity=0.045  Sum_probs=39.1

Q ss_pred             HHHHHHHHHHHhhcCCcchHHHHHHHHHHHhhChHHHHHHHHHHhhhh
Q 042142          295 RENIKAFILDIFAAGTDTSAITVEWALAELINHPDMMKKAREEIDSVV  342 (376)
Q Consensus       295 ~~~l~~~~~~~~~aG~dTTa~~l~~~l~~L~~~P~v~~~l~~Ei~~v~  342 (376)
                      ...........++-=+.+|+..+.-.+.+-++||+...++.+.|.+-+
T Consensus        31 ~~~~~~~~~~~I~kKy~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL   78 (87)
T PF14129_consen   31 SDDNMIAYYQYIFKKYGIDSAQFDSSMVYYSRNPEEYEKIYDKVIERL   78 (87)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence            344445556678888999999999999999999999999999886644


No 41 
>PF05172 Nup35_RRM:  Nup53/35/40-type RNA recognition motif;  InterPro: IPR007846 The MPPN (Mitotic PhosphoProtein N end) family is uncharacterised however it probably plays a role in the cell cycle because the family includes mitotic phosphoproteins O13026 from SWISSPROT []. This family also includes Q05166 from SWISSPROT a suppressor of thermosensitive mutations in the DNA polymerase delta gene, Pol III []. The conserved central region appears to be distantly related to the RNA-binding region RNP-1 (RNA recognition motif, IPR000504 from INTERPRO), suggesting an RNA binding function for this protein.; PDB: 1WWH_C 3P3D_A.
Probab=41.46  E-value=61  Score=23.33  Aligned_cols=47  Identities=17%  Similarity=0.258  Sum_probs=33.6

Q ss_pred             CchHHHHHHHHhcCCeEEEe--------------cCCccEEEcc--CHHHHHHHHHhCCcccc
Q 042142           53 IPHQALHKLSIRYGPLIHLF--------------LGSVPCIVAC--SPETAKEILKTHETSFC   99 (376)
Q Consensus        53 ~~~~~~~~~~~~yG~i~~~~--------------~g~~~~v~i~--dp~~~~~il~~~~~~f~   99 (376)
                      .....+.+.+++||.|....              ..+.+++.|.  ++..++..|.+++..+.
T Consensus        17 ~~~~~Vl~~F~~~G~Ile~~~~~~~~~~~~~~~~~~~~NWi~I~Y~~~~~A~rAL~~NG~i~~   79 (100)
T PF05172_consen   17 SASNQVLRHFSSFGTILEHFEVLRSSSGINPYPIPSGGNWIHITYDNPLSAQRALQKNGTIFS   79 (100)
T ss_dssp             GGHHHHHHHHHCCS-EECEEGGG----------E-CCTTEEEEEESSHHHHHHHHTTTTEEET
T ss_pred             HHHHHHHHHHHhcceEEEeecccccccccccccCCCCCCEEEEECCCHHHHHHHHHhCCeEEc
Confidence            34456778889999998774              3355666665  89999999998876664


No 42 
>PF13625 Helicase_C_3:  Helicase conserved C-terminal domain
Probab=37.16  E-value=63  Score=24.38  Aligned_cols=40  Identities=20%  Similarity=0.222  Sum_probs=31.0

Q ss_pred             CchHHHHHHHHhcCCeEEEecCCccEEEccCHHHHHHHHHhC
Q 042142           53 IPHQALHKLSIRYGPLIHLFLGSVPCIVACSPETAKEILKTH   94 (376)
Q Consensus        53 ~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~dp~~~~~il~~~   94 (376)
                      +....+.+|.++||.+--..  +...+...|++.++++....
T Consensus        75 ~v~~~i~~w~~~~g~v~l~~--~~~~l~~~d~~~l~~l~~~~  114 (129)
T PF13625_consen   75 NVEQSIEDWARRYGRVRLYK--GAYLLECDDPELLDELLADP  114 (129)
T ss_pred             HHHHHHHHHHHhcCCEEEec--CeEEEEECCHHHHHHHHhCh
Confidence            34567899999999876522  46678889999999998753


No 43 
>PF14483 Cut8_M:  Cut8 dimerisation domain; PDB: 3Q5W_A 3Q5X_A.
Probab=33.90  E-value=72  Score=18.26  Aligned_cols=17  Identities=29%  Similarity=0.601  Sum_probs=11.8

Q ss_pred             HHHHHh-hChHHHHHHHH
Q 042142          320 ALAELI-NHPDMMKKARE  336 (376)
Q Consensus       320 ~l~~L~-~~P~v~~~l~~  336 (376)
                      .+..++ +||++++.+++
T Consensus        18 lL~~l~~~HPei~~~i~~   35 (38)
T PF14483_consen   18 LLQSLCERHPEIQQEIRS   35 (38)
T ss_dssp             HHHHHHHHSTHHHHHHHT
T ss_pred             HHHHHHHhChhHHHHHHh
Confidence            333444 89999988875


No 44 
>PRK13991 cell division topological specificity factor MinE; Provisional
Probab=30.58  E-value=1.1e+02  Score=21.38  Aligned_cols=19  Identities=21%  Similarity=0.613  Sum_probs=16.4

Q ss_pred             ChHHHHHHHHHHhhhhCCC
Q 042142          327 HPDMMKKAREEIDSVVGKS  345 (376)
Q Consensus       327 ~P~v~~~l~~Ei~~v~~~~  345 (376)
                      .|+..+.+++|+-+|+.+.
T Consensus        35 ~p~~l~~lk~eil~VIsKY   53 (87)
T PRK13991         35 TPEMMEQMKADLAEVIKRY   53 (87)
T ss_pred             CHHHHHHHHHHHHHHHHHH
Confidence            6999999999999988643


No 45 
>PRK13467 F0F1 ATP synthase subunit C; Provisional
Probab=30.32  E-value=75  Score=20.86  Aligned_cols=25  Identities=12%  Similarity=0.258  Sum_probs=20.0

Q ss_pred             HHHHHHHHHHHhhChHHHHHHHHHH
Q 042142          314 AITVEWALAELINHPDMMKKAREEI  338 (376)
Q Consensus       314 a~~l~~~l~~L~~~P~v~~~l~~Ei  338 (376)
                      +...+-++--+++|||.+.+++.-.
T Consensus        20 G~v~~~a~e~iaRqPE~~~~i~~~m   44 (66)
T PRK13467         20 GFLMANLFKSAARQPEMIGQLRSLM   44 (66)
T ss_pred             HHHHHHHHHHHHcChhHHHhHHHHH
Confidence            4556677788999999999998753


No 46 
>PHA01346 hypothetical protein
Probab=28.80  E-value=50  Score=19.15  Aligned_cols=17  Identities=35%  Similarity=0.597  Sum_probs=11.3

Q ss_pred             ChH-HHHHHHHHHhhhhC
Q 042142          327 HPD-MMKKAREEIDSVVG  343 (376)
Q Consensus       327 ~P~-v~~~l~~Ei~~v~~  343 (376)
                      .|+ -|+|+++|+++.+.
T Consensus        29 dpdfsqekihaeldsllr   46 (53)
T PHA01346         29 DPDFSQEKIHAELDSLLR   46 (53)
T ss_pred             CCCccHHHHHHHHHHHHH
Confidence            444 47788888877653


No 47 
>PF08285 DPM3:  Dolichol-phosphate mannosyltransferase subunit 3 (DPM3);  InterPro: IPR013174 This family corresponds to subunit 3 of dolichol-phosphate mannosyltransferase, an enzyme which generates mannosyl donors for glycosylphosphatidylinositols, N-glycan and protein O- and C-mannosylation. DPM3 is an integral membrane protein and plays a role in stabilising the dolichol-phosphate mannosyl transferase complex [].
Probab=28.48  E-value=81  Score=22.26  Aligned_cols=30  Identities=20%  Similarity=0.380  Sum_probs=24.3

Q ss_pred             HHHHHHHHHHHhhChHHHHHHHHHHhhhhC
Q 042142          314 AITVEWALAELINHPDMMKKAREEIDSVVG  343 (376)
Q Consensus       314 a~~l~~~l~~L~~~P~v~~~l~~Ei~~v~~  343 (376)
                      ..++.|.++..-..||..+.+++||+++-.
T Consensus        53 l~~lgy~v~tFnDcpeA~~eL~~eI~eAK~   82 (91)
T PF08285_consen   53 LFTLGYGVATFNDCPEAAKELQKEIKEAKA   82 (91)
T ss_pred             HHHHHHhhhccCCCHHHHHHHHHHHHHHHH
Confidence            346677777777899999999999998743


No 48 
>PF09926 DUF2158:  Uncharacterized small protein (DUF2158);  InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function. 
Probab=27.92  E-value=60  Score=20.22  Aligned_cols=17  Identities=24%  Similarity=0.284  Sum_probs=14.8

Q ss_pred             CCeEEEecCCccEEEcc
Q 042142           66 GPLIHLFLGSVPCIVAC   82 (376)
Q Consensus        66 G~i~~~~~g~~~~v~i~   82 (376)
                      |++++++-||+.++|..
T Consensus         4 GDvV~LKSGGp~MTV~~   20 (53)
T PF09926_consen    4 GDVVQLKSGGPRMTVTE   20 (53)
T ss_pred             CCEEEEccCCCCeEEEE
Confidence            89999999999988763


No 49 
>PF10454 DUF2458:  Protein of unknown function (DUF2458);  InterPro: IPR018858  This entry represents a family of uncharacterised proteins. 
Probab=27.78  E-value=83  Score=24.62  Aligned_cols=25  Identities=12%  Similarity=0.456  Sum_probs=21.7

Q ss_pred             chHHHHHHHHHHHhhChHHHHHHHH
Q 042142          312 TSAITVEWALAELINHPDMMKKARE  336 (376)
Q Consensus       312 TTa~~l~~~l~~L~~~P~v~~~l~~  336 (376)
                      |-..+|.+.+-.+++||+++++||+
T Consensus         7 ~w~~ALryv~~~v~~n~~~~~~Ir~   31 (150)
T PF10454_consen    7 TWPAALRYVMKTVAQNPEFLQRIRR   31 (150)
T ss_pred             cHHHHHHHHHHHHhcCHHHHHHHHH
Confidence            5677899999999999999999865


No 50 
>TIGR01215 minE cell division topological specificity factor MinE. This protein is involved in the process of cell division. This protein prevents the proteins MinC and MinD to inhibit cell division at internal sites, but allows inhibiton at polar sites. This allows for correct cell division at the proper sites.
Probab=27.60  E-value=1.2e+02  Score=20.80  Aligned_cols=19  Identities=32%  Similarity=0.529  Sum_probs=16.3

Q ss_pred             hChHHHHHHHHHHhhhhCC
Q 042142          326 NHPDMMKKAREEIDSVVGK  344 (376)
Q Consensus       326 ~~P~v~~~l~~Ei~~v~~~  344 (376)
                      ..|+..+.+++||.+|+.+
T Consensus        33 ~~p~~l~~mk~dil~VIsk   51 (81)
T TIGR01215        33 LAPEYLEELRKEILEVISK   51 (81)
T ss_pred             CCHHHHHHHHHHHHHHHHH
Confidence            3689999999999999864


No 51 
>COG3954 PrkB Phosphoribulokinase [Energy production and conversion]
Probab=27.26  E-value=1.7e+02  Score=23.98  Aligned_cols=58  Identities=22%  Similarity=0.261  Sum_probs=37.4

Q ss_pred             hcCCcchHHHHHHHHHHHhhCh--------------HHHHHHHHHHhhhhCCCCCCCc--ccCCCChhHHHHHHHHhc
Q 042142          307 AAGTDTSAITVEWALAELINHP--------------DMMKKAREEIDSVVGKSRLVEE--SDIINLPYLQALVKETLR  368 (376)
Q Consensus       307 ~aG~dTTa~~l~~~l~~L~~~P--------------~v~~~l~~Ei~~v~~~~~~~~~--~~l~~lpyl~avikEtlR  368 (376)
                      .||+.||+.+..-++..+..++              +.-.++++|-++    .+.+++  .+-+.++.|+.++.|--|
T Consensus        15 GAGTTTts~aFrKiF~~~~I~aa~iEGDsFHR~tRpeMd~~Irkar~~----GrhisyFgpeANdf~~LE~~f~eYg~   88 (289)
T COG3954          15 GAGTTTTSLAFRKIFAQLNIHAAEVEGDSFHRYTRPEMDMAIRKARDA----GRHISYFGPEANDFGLLEQTFIEYGQ   88 (289)
T ss_pred             CCCcccHHHHHHHHHHhcCccHhhhccccccccCchhHHHHHHHHHHc----CCcceecCccccchHHHHHHHHHhcc
Confidence            4788888888888887776554              444445544322    233443  345678999998888544


No 52 
>PF05961 Chordopox_A13L:  Chordopoxvirus A13L protein;  InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=26.88  E-value=1.9e+02  Score=18.98  Aligned_cols=17  Identities=12%  Similarity=0.382  Sum_probs=8.4

Q ss_pred             HHHHHHHHHHHHHHHhc
Q 042142           12 LVWLVSTILVRSIFRRS   28 (376)
Q Consensus        12 ~~~~~~~~~~~~~~~~~   28 (376)
                      ++..+++++++.++.+.
T Consensus        10 ICVaii~lIlY~iYnr~   26 (68)
T PF05961_consen   10 ICVAIIGLILYGIYNRK   26 (68)
T ss_pred             HHHHHHHHHHHHHHhcc
Confidence            34444455555555543


No 53 
>PRK10597 DNA damage-inducible protein I; Provisional
Probab=26.27  E-value=1.8e+02  Score=20.06  Aligned_cols=38  Identities=8%  Similarity=0.177  Sum_probs=28.3

Q ss_pred             HHHHHHHHhcCCe---EEEecCCccEEEccCH-----HHHHHHHHh
Q 042142           56 QALHKLSIRYGPL---IHLFLGSVPCIVACSP-----ETAKEILKT   93 (376)
Q Consensus        56 ~~~~~~~~~yG~i---~~~~~g~~~~v~i~dp-----~~~~~il~~   93 (376)
                      +..++++.+|.++   +++..++.+-+-|++.     +.+.++++.
T Consensus        24 EL~kRl~~~fPd~~~~v~Vr~~s~n~lsv~g~~k~dK~~i~eiLqE   69 (81)
T PRK10597         24 ELSRRIQYAFPDNEGHVSVRYAAANNLSVIGATKEDKDRISEILQE   69 (81)
T ss_pred             HHHHHHHhhCCCCCccEEEeecCCCceEecCCCcchHHHHHHHHHH
Confidence            4567889999987   8999988887776443     666666653


No 54 
>PLN03120 nucleic acid binding protein; Provisional
Probab=25.93  E-value=2e+02  Score=24.87  Aligned_cols=48  Identities=10%  Similarity=0.167  Sum_probs=37.3

Q ss_pred             hHHHHHHHHhcCCeEEEecC------CccEEEccCHHHHHHHHHhCCccccCCC
Q 042142           55 HQALHKLSIRYGPLIHLFLG------SVPCIVACSPETAKEILKTHETSFCDRP  102 (376)
Q Consensus        55 ~~~~~~~~~~yG~i~~~~~g------~~~~v~i~dp~~~~~il~~~~~~f~~~~  102 (376)
                      .+.+.+++..||+|..+.+.      +.-.|-..+++.++..+..++..+.++.
T Consensus        18 E~dLrefFS~~G~I~~V~I~~d~~~~GfAFVtF~d~eaAe~AllLnG~~l~gr~   71 (260)
T PLN03120         18 ERDIKEFFSFSGDIEYVEMQSENERSQIAYVTFKDPQGAETALLLSGATIVDQS   71 (260)
T ss_pred             HHHHHHHHHhcCCeEEEEEeecCCCCCEEEEEeCcHHHHHHHHHhcCCeeCCce
Confidence            46788999999999888772      3456677799999999987776666554


No 55 
>PF15330 SIT:  SHP2-interacting transmembrane adaptor protein, SIT
Probab=25.21  E-value=2.2e+02  Score=20.81  Aligned_cols=11  Identities=36%  Similarity=0.489  Sum_probs=7.9

Q ss_pred             CCCcccccccc
Q 042142           40 ALPIIGHLHLL   50 (376)
Q Consensus        40 ~~p~lG~~~~~   50 (376)
                      .-|+.||+...
T Consensus        45 ~~p~YgNL~~~   55 (107)
T PF15330_consen   45 DDPCYGNLELQ   55 (107)
T ss_pred             CCccccccccc
Confidence            46888887654


No 56 
>PRK13466 F0F1 ATP synthase subunit C; Provisional
Probab=25.00  E-value=1.1e+02  Score=20.18  Aligned_cols=25  Identities=20%  Similarity=0.280  Sum_probs=19.5

Q ss_pred             HHHHHHHHHHHhhChHHHHHHHHHH
Q 042142          314 AITVEWALAELINHPDMMKKAREEI  338 (376)
Q Consensus       314 a~~l~~~l~~L~~~P~v~~~l~~Ei  338 (376)
                      ....+-++--+++|||.+.+++.-.
T Consensus        20 G~~~~~~~e~vaRqPea~~~l~~~~   44 (66)
T PRK13466         20 GLLVASYLSSTARQPEMQSKLMAGV   44 (66)
T ss_pred             HHHHHHHHHHHHcChhHHHhHHHHH
Confidence            3455667778999999999998753


No 57 
>PLN03134 glycine-rich RNA-binding protein 4; Provisional
Probab=24.86  E-value=2.1e+02  Score=22.10  Aligned_cols=39  Identities=8%  Similarity=0.092  Sum_probs=30.3

Q ss_pred             hHHHHHHHHhcCCeEEEecC---------CccEEEccCHHHHHHHHHh
Q 042142           55 HQALHKLSIRYGPLIHLFLG---------SVPCIVACSPETAKEILKT   93 (376)
Q Consensus        55 ~~~~~~~~~~yG~i~~~~~g---------~~~~v~i~dp~~~~~il~~   93 (376)
                      ...+.++.++||+|..+.+.         +.-.|-..+++.++.++..
T Consensus        48 e~~L~~~F~~~G~I~~v~i~~d~~tg~~kGfaFV~F~~~e~A~~Al~~   95 (144)
T PLN03134         48 DASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE   95 (144)
T ss_pred             HHHHHHHHhcCCCeEEEEEEecCCCCCcceEEEEEECCHHHHHHHHHH
Confidence            46789999999999776652         2346677799999999964


No 58 
>TIGR01260 ATP_synt_c ATP synthase, F0 subunit c. This model describes the subunit c in F1/F0-ATP synthase, a membrane associated multisubunit complex found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. The functional role of subunit c, which is the part of F0 cluster, has been delineated in-vitro reconstitution experiments. Overall experimental proof exists that demonstrate the electrochemical gradient is converted into a rotational torque that leads to ATP synthesis.
Probab=24.80  E-value=1e+02  Score=19.57  Aligned_cols=23  Identities=17%  Similarity=0.130  Sum_probs=18.2

Q ss_pred             HHHHHHHHHHhhChHHHHHHHHH
Q 042142          315 ITVEWALAELINHPDMMKKAREE  337 (376)
Q Consensus       315 ~~l~~~l~~L~~~P~v~~~l~~E  337 (376)
                      ...+-++--+++|||...+++.-
T Consensus        11 ~i~~~a~~~iaRqPe~~~~l~~~   33 (58)
T TIGR01260        11 ILGGKFLESAARQPELKPLLRTT   33 (58)
T ss_pred             HHHHHHHHHHHcChhHHHhHHHH
Confidence            34566777899999999999875


No 59 
>KOG0149 consensus Predicted RNA-binding protein SEB4 (RRM superfamily) [General function prediction only]
Probab=24.72  E-value=2.1e+02  Score=24.22  Aligned_cols=50  Identities=14%  Similarity=0.226  Sum_probs=35.5

Q ss_pred             CchHHHHHHHHhcCCeEEEec------C---CccEEEccCHHHHHHHHHhCCccccCCC
Q 042142           53 IPHQALHKLSIRYGPLIHLFL------G---SVPCIVACSPETAKEILKTHETSFCDRP  102 (376)
Q Consensus        53 ~~~~~~~~~~~~yG~i~~~~~------g---~~~~v~i~dp~~~~~il~~~~~~f~~~~  102 (376)
                      ...+.+.+.+|+||+|+.-.+      |   |--.|-..|++++...+++......+|.
T Consensus        24 T~~~~l~~yFeqfGeI~eavvitd~~t~rskGyGfVTf~d~~aa~rAc~dp~piIdGR~   82 (247)
T KOG0149|consen   24 THKETLRRYFEQFGEIVEAVVITDKNTGRSKGYGFVTFRDAEAATRACKDPNPIIDGRK   82 (247)
T ss_pred             cchHHHHHHHHHhCceEEEEEEeccCCccccceeeEEeecHHHHHHHhcCCCCcccccc
Confidence            345789999999999875322      1   2346777899999999987665555553


No 60 
>PRK00296 minE cell division topological specificity factor MinE; Reviewed
Probab=24.16  E-value=1.6e+02  Score=20.49  Aligned_cols=18  Identities=39%  Similarity=0.647  Sum_probs=15.7

Q ss_pred             ChHHHHHHHHHHhhhhCC
Q 042142          327 HPDMMKKAREEIDSVVGK  344 (376)
Q Consensus       327 ~P~v~~~l~~Ei~~v~~~  344 (376)
                      .|+..+.+++||.+|+.+
T Consensus        35 ~p~~l~~lk~dIl~VIsK   52 (86)
T PRK00296         35 EPDYLPQLRKEILEVIAK   52 (86)
T ss_pred             CHHHHHHHHHHHHHHHHH
Confidence            488999999999999864


No 61 
>TIGR01661 ELAV_HUD_SF ELAV/HuD family splicing factor. These proteins contain 3 RNA-recognition motifs (rrm: pfam00076).
Probab=23.97  E-value=1.8e+02  Score=26.14  Aligned_cols=57  Identities=11%  Similarity=0.075  Sum_probs=37.2

Q ss_pred             ccccccccCCCchHHHHHHHHhcCCeEEEecCCc---------cEEEccCHHHHHHHHHh-CCccccCC
Q 042142           43 IIGHLHLLAPIPHQALHKLSIRYGPLIHLFLGSV---------PCIVACSPETAKEILKT-HETSFCDR  101 (376)
Q Consensus        43 ~lG~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~---------~~v~i~dp~~~~~il~~-~~~~f~~~  101 (376)
                      ++||+..-  --...+.+++++||+|..+.+...         -.|...+++.+..++.. ++..+.+|
T Consensus       273 fV~NL~~~--~~e~~L~~~F~~fG~v~~v~i~~d~~t~~skG~aFV~F~~~~~A~~Ai~~lnG~~~~gr  339 (352)
T TIGR01661       273 FVYNLSPD--TDETVLWQLFGPFGAVQNVKIIRDLTTNQCKGYGFVSMTNYDEAAMAILSLNGYTLGNR  339 (352)
T ss_pred             EEeCCCCC--CCHHHHHHHHHhCCCeEEEEEeEcCCCCCccceEEEEECCHHHHHHHHHHhCCCEECCe
Confidence            45555322  224678899999999988876422         26777788988888763 44444433


No 62 
>PF14824 Sirohm_synth_M:  Sirohaem biosynthesis protein central; PDB: 1KYQ_B.
Probab=23.29  E-value=98  Score=16.71  Aligned_cols=16  Identities=25%  Similarity=0.576  Sum_probs=11.6

Q ss_pred             hChHHHHHHHHHHhhh
Q 042142          326 NHPDMMKKAREEIDSV  341 (376)
Q Consensus       326 ~~P~v~~~l~~Ei~~v  341 (376)
                      ..|..-.++|+||++.
T Consensus        14 ~sP~la~~iR~~ie~~   29 (30)
T PF14824_consen   14 KSPRLARLIRKEIERL   29 (30)
T ss_dssp             S-HHHHHHHHHHHHHH
T ss_pred             CChHHHHHHHHHHHHh
Confidence            3578888889988764


No 63 
>PF00076 RRM_1:  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain);  InterPro: IPR000504 Many eukaryotic proteins containing one or more copies of a putative RNA-binding domain of about 90 amino acids are known to bind single-stranded RNAs [, , ]. The largest group of single strand RNA-binding proteins is the eukaryotic RNA recognition motif (RRM) family that contains an eight amino acid RNP-1 consensus sequence [, ]. RRM proteins have a variety of RNA binding preferences and functions, and include heterogeneous nuclear ribonucleoproteins (hnRNPs), proteins implicated in regulation of alternative splicing (SR, U2AF, Sxl), protein components of small nuclear ribonucleoproteins (U1 and U2 snRNPs), and proteins that regulate RNA stability and translation (PABP, La, Hu) [, , ]. The RRM in heterodimeric splicing factor U2 snRNP auxiliary factor (U2AF) appears to have two RRM-like domains with specialised features for protein recognition []. The motif also appears in a few single stranded DNA binding proteins. The typical RRM consists of four anti-parallel beta-strands and two alpha-helices arranged in a beta-alpha-beta-beta-alpha-beta fold with side chains that stack with RNA bases. Specificity of RNA binding is determined by multiple contacts with surrounding amino acids. A third helix is present during RNA binding in some cases []. The RRM is reviewed in a number of publications [, , ].; GO: 0003676 nucleic acid binding; PDB: 2RNE_A 2DGO_A 2DO4_A 1YTY_B 2VOO_B 2VOP_A 2VON_B 1ZH5_B 2VOD_A 1S79_A ....
Probab=22.30  E-value=2.1e+02  Score=17.90  Aligned_cols=39  Identities=15%  Similarity=0.202  Sum_probs=28.5

Q ss_pred             hHHHHHHHHhcCCeEEEecCC--------ccEEEccCHHHHHHHHHh
Q 042142           55 HQALHKLSIRYGPLIHLFLGS--------VPCIVACSPETAKEILKT   93 (376)
Q Consensus        55 ~~~~~~~~~~yG~i~~~~~g~--------~~~v~i~dp~~~~~il~~   93 (376)
                      ...+.++.++||++..+.+..        .-.|...+++.++.++..
T Consensus        12 ~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~a~V~F~~~~~a~~a~~~   58 (70)
T PF00076_consen   12 EEELRDFFSQFGKIESIKVMRNSSGKSKGYAFVEFESEEDAEKALEE   58 (70)
T ss_dssp             HHHHHHHHHTTSTEEEEEEEEETTSSEEEEEEEEESSHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhhcccccccccccccccceEEEEEcCHHHHHHHHHH
Confidence            467889999999986665432        235666789999998873


No 64 
>PRK02302 hypothetical protein; Provisional
Probab=21.97  E-value=1.9e+02  Score=20.33  Aligned_cols=33  Identities=15%  Similarity=0.148  Sum_probs=26.4

Q ss_pred             HHHhcCCeEEEecCCccEEEccCHHHHHHHHHh
Q 042142           61 LSIRYGPLIHLFLGSVPCIVACSPETAKEILKT   93 (376)
Q Consensus        61 ~~~~yG~i~~~~~g~~~~v~i~dp~~~~~il~~   93 (376)
                      --++||+|..+.=-.+-+++-.|-+.++++..+
T Consensus        22 ~LrkfG~I~Y~Skk~kYvvlYvn~~~~e~~~~k   54 (89)
T PRK02302         22 KLSKYGDIVYHSKRSRYLVLYVNKEDVEQKLEE   54 (89)
T ss_pred             HHhhcCcEEEEeccccEEEEEECHHHHHHHHHH
Confidence            346899999877666778888899999998864


No 65 
>PRK05880 F0F1 ATP synthase subunit C; Validated
Probab=21.56  E-value=1.2e+02  Score=20.81  Aligned_cols=26  Identities=4%  Similarity=0.121  Sum_probs=20.9

Q ss_pred             hHHHHHHHHHHHhhChHHHHHHHHHH
Q 042142          313 SAITVEWALAELINHPDMMKKAREEI  338 (376)
Q Consensus       313 Ta~~l~~~l~~L~~~P~v~~~l~~Ei  338 (376)
                      -....+-++--++||||...+++.-.
T Consensus        28 ~G~v~~~a~eaiaRqPEa~~~l~~~m   53 (81)
T PRK05880         28 DGVAGNALISGVARQPEAQGRLFTPF   53 (81)
T ss_pred             HHHHHHHHHHHHHcChhHHHhHHHHH
Confidence            35566777888999999999998753


No 66 
>smart00362 RRM_2 RNA recognition motif.
Probab=20.47  E-value=2.2e+02  Score=17.47  Aligned_cols=39  Identities=18%  Similarity=0.330  Sum_probs=27.2

Q ss_pred             hHHHHHHHHhcCCeEEEecC-------CccEEEccCHHHHHHHHHh
Q 042142           55 HQALHKLSIRYGPLIHLFLG-------SVPCIVACSPETAKEILKT   93 (376)
Q Consensus        55 ~~~~~~~~~~yG~i~~~~~g-------~~~~v~i~dp~~~~~il~~   93 (376)
                      ...+.++.++||++..+.+.       +.-.|-..+++.++.++..
T Consensus        13 ~~~l~~~~~~~g~v~~~~~~~~~~~~~~~~~v~f~~~~~a~~a~~~   58 (72)
T smart00362       13 EEDLKELFSKFGPIESVKIPKDTGKSKGFAFVEFESEEDAEKAIEA   58 (72)
T ss_pred             HHHHHHHHHhcCCEEEEEEecCCCCCCceEEEEeCCHHHHHHHHHH
Confidence            45677888999998766543       2234556788888888764


No 67 
>PRK13989 cell division topological specificity factor MinE; Provisional
Probab=20.31  E-value=61  Score=22.48  Aligned_cols=19  Identities=26%  Similarity=0.476  Sum_probs=16.3

Q ss_pred             ChHHHHHHHHHHhhhhCCC
Q 042142          327 HPDMMKKAREEIDSVVGKS  345 (376)
Q Consensus       327 ~P~v~~~l~~Ei~~v~~~~  345 (376)
                      .|+..+.+++||-+|+.+.
T Consensus        36 ~p~~l~~lk~dil~VIsKY   54 (84)
T PRK13989         36 PPDYLPALQKELVAVISKY   54 (84)
T ss_pred             CHHHHHHHHHHHHHHHHHh
Confidence            5899999999999998753


Done!