Query 042145
Match_columns 233
No_of_seqs 113 out of 1107
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 05:06:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042145.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042145hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gp6_A Leucoanthocyanidin diox 100.0 5.3E-51 1.8E-55 358.9 18.0 227 6-233 3-245 (356)
2 3oox_A Putative 2OG-Fe(II) oxy 100.0 1.6E-45 5.3E-50 319.0 17.1 190 42-233 5-204 (312)
3 1w9y_A 1-aminocyclopropane-1-c 100.0 1.5E-44 5E-49 313.5 13.0 184 42-232 2-189 (319)
4 1dcs_A Deacetoxycephalosporin 100.0 5.3E-43 1.8E-47 302.9 11.9 177 42-232 3-195 (311)
5 1odm_A Isopenicillin N synthas 100.0 4.9E-42 1.7E-46 299.2 15.5 183 42-233 7-227 (331)
6 3on7_A Oxidoreductase, iron/as 100.0 1.8E-40 6.1E-45 283.1 15.2 174 42-233 2-187 (280)
7 3o2g_A Gamma-butyrobetaine dio 60.3 4.6 0.00016 35.0 2.6 51 43-98 122-172 (388)
8 1otj_A Alpha-ketoglutarate-dep 59.4 10 0.00035 30.9 4.4 50 42-97 16-65 (283)
9 2da7_A Zinc finger homeobox pr 57.4 5.1 0.00018 26.0 1.8 40 155-194 14-54 (71)
10 2dbn_A Hypothetical protein YB 56.4 4.9 0.00017 35.7 2.1 55 39-98 97-151 (461)
11 3m0z_A Putative aldolase; MCSG 56.0 21 0.00071 28.7 5.4 39 56-95 171-210 (249)
12 3pvj_A Alpha-ketoglutarate-dep 55.5 13 0.00044 30.5 4.4 50 42-97 14-63 (277)
13 4ay7_A Methylcobalamin\: coenz 54.9 33 0.0011 28.8 7.1 47 52-98 298-348 (348)
14 1oih_A Putative alkylsulfatase 51.6 16 0.00055 30.1 4.5 51 42-98 26-77 (301)
15 1m5a_B Insulin B chain; alpha 48.4 21 0.0007 19.0 2.9 19 58-76 9-27 (30)
16 2opi_A L-fuculose-1-phosphate 48.4 13 0.00043 29.2 3.1 36 43-81 125-160 (212)
17 3m6y_A 4-hydroxy-2-oxoglutarat 48.4 22 0.00074 28.9 4.5 39 56-95 194-233 (275)
18 2fk5_A Fuculose-1-phosphate al 46.9 26 0.00088 27.2 4.7 36 43-81 117-153 (200)
19 3qy9_A DHPR, dihydrodipicolina 46.7 15 0.00051 29.6 3.4 41 58-98 88-128 (243)
20 4f3y_A DHPR, dihydrodipicolina 46.6 15 0.00051 30.2 3.4 38 60-97 111-148 (272)
21 3r1j_A Alpha-ketoglutarate-dep 46.3 23 0.00077 29.4 4.6 50 42-97 20-70 (301)
22 3ijp_A DHPR, dihydrodipicolina 44.2 17 0.0006 30.1 3.5 37 61-97 127-163 (288)
23 1e4c_P L-fuculose 1-phosphate 40.3 19 0.00066 28.2 3.1 36 43-81 122-157 (215)
24 1pvt_A Sugar-phosphate aldolas 40.1 25 0.00086 27.9 3.8 37 42-81 160-196 (238)
25 2irp_A Putative aldolase class 37.9 22 0.00074 27.7 3.0 35 43-81 139-176 (208)
26 2x4k_A 4-oxalocrotonate tautom 37.0 36 0.0012 20.1 3.4 24 165-188 17-40 (63)
27 3ocr_A Class II aldolase/adduc 34.9 26 0.00089 28.7 3.1 38 42-81 155-192 (273)
28 2opa_A Probable tautomerase YW 34.2 43 0.0015 19.8 3.4 24 165-188 14-37 (61)
29 1otf_A 4-oxalocrotonate tautom 34.1 42 0.0015 19.9 3.4 24 165-188 14-37 (62)
30 2v9l_A Rhamnulose-1-phosphate 33.4 26 0.0009 28.6 2.9 36 43-81 179-214 (274)
31 3abf_A 4-oxalocrotonate tautom 33.0 49 0.0017 19.8 3.6 23 166-188 16-38 (64)
32 1vm6_A DHPR, dihydrodipicolina 31.9 55 0.0019 26.1 4.5 40 58-97 89-128 (228)
33 3ghf_A Septum site-determining 30.7 33 0.0011 24.4 2.7 37 45-84 50-86 (120)
34 3ry0_A Putative tautomerase; o 28.9 59 0.002 19.7 3.4 24 165-188 14-37 (65)
35 3m21_A Probable tautomerase HP 26.1 70 0.0024 19.5 3.4 24 165-188 17-40 (67)
36 1gyx_A YDCE, B1461, hypothetic 26.1 67 0.0023 20.3 3.4 25 165-189 15-39 (76)
37 1dih_A Dihydrodipicolinate red 24.9 58 0.002 26.5 3.6 37 61-97 111-147 (273)
38 3mb2_A 4-oxalocrotonate tautom 23.5 81 0.0028 19.6 3.4 24 165-188 15-38 (72)
39 1p9l_A Dihydrodipicolinate red 22.5 69 0.0024 25.6 3.5 39 59-97 82-123 (245)
40 1vm6_A DHPR, dihydrodipicolina 22.4 66 0.0023 25.7 3.3 45 45-95 56-101 (228)
41 2qt7_A Receptor-type tyrosine- 22.0 20 0.0007 24.3 0.2 33 170-202 18-51 (91)
42 4f3y_A DHPR, dihydrodipicolina 21.4 1.7E+02 0.0058 23.7 5.8 44 46-95 77-121 (272)
43 3m20_A 4-oxalocrotonate tautom 21.3 88 0.003 18.8 3.1 24 165-188 13-36 (62)
44 2rdq_A 1-deoxypentalenic acid 21.1 1E+02 0.0036 24.5 4.4 36 62-98 22-57 (288)
45 3dkq_A PKHD-type hydroxylase S 20.9 81 0.0028 25.3 3.6 44 174-223 75-118 (243)
No 1
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=5.3e-51 Score=358.94 Aligned_cols=227 Identities=29% Similarity=0.538 Sum_probs=197.1
Q ss_pred hhhhHHhhhh-ccccCCcccccCCCCCCCCcc---cC---CCCCCCceEeCCCCCCc---cHHHHHHHHHHHhHhcceEE
Q 042145 6 TKLLLSDLAS-TVESVTSNYIRPISDRPNLTE---VQ---ISDGSIPLIDLQVLDGP---RRLDLIKQIGQACHHDGFFQ 75 (233)
Q Consensus 6 ~~~~~~~~~~-~~~~~p~~~~~p~~~~~~~~~---~~---~~~~~iPvIDls~l~~~---~~~~~~~~l~~A~~~~GFf~ 75 (233)
++++|++|++ +++.||.+|++|..+++.... .. .. .+||||||+.|.++ .+.+++++|.+||++|||||
T Consensus 3 ~~~~v~~l~~~~~~~vP~~~~~p~~~~~~~~~~~~~~~~~~~-~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF~ 81 (356)
T 1gp6_A 3 AVERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDG-PQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMH 81 (356)
T ss_dssp CCCCHHHHHHTTCSSCCGGGSCCHHHHTTCCCHHHHHHCCCS-CCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEE
T ss_pred CcccHHHHHhcCCCCCCHHhcCCchhcccccccccccccccC-CCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEEE
Confidence 3578999997 899999999999888776321 01 12 47999999998654 36779999999999999999
Q ss_pred EeccCCChHHHHHHHHHHHHhhcCCHHHHhhccCCCC-CCCcccccccccCCCCcccccccccccccCCC-ccCCCCCCC
Q 042145 76 VKNHGIPETIINNTLSIAGAFFKLPESERLKSYSDDP-SKSKRLSTSFNVNTKKVSNWRDYLRLHCYPLQ-DCMHEWPSN 153 (233)
Q Consensus 76 l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~-~~~~GY~~~~~~~~~~~~d~~E~~~~~~~p~~-~~~~~wP~~ 153 (233)
|+||||+.++++++++.+++||+||.|+|+++..... ..++||+........+..||+|.|.++..|.. ..+|.||..
T Consensus 82 v~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~~p~~~~~~~~wP~~ 161 (356)
T 1gp6_A 82 LINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKT 161 (356)
T ss_dssp EESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCCS
T ss_pred EeCCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheeeeecCCccccccccCCCc
Confidence 9999999999999999999999999999999976543 46899977654445667899999999876532 347899999
Q ss_pred CCch-HHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHhc---CcCcceeEeeeCCCCCCCCcCCCCCccCCCceeEE
Q 042145 154 PPSF-EVVAEYCTSVRGLVLKLLEAISESMGLQRDYIDKALG---KHGQQMALNYCPPCPQPDLTYGLPGHTDPNLITVL 229 (233)
Q Consensus 154 ~~~f-~~~~~y~~~~~~l~~~ll~~i~~~Lgl~~~~~~~~~~---~~~~~lrll~YPp~~~~~~~~g~~~HtD~g~lTlL 229 (233)
++.| +.+++|+++|++++..|+++|+++||+++++|.+.+. .+.+.||++|||||++++..+|+++|||+|+||||
T Consensus 162 ~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL 241 (356)
T 1gp6_A 162 PSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFI 241 (356)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEE
T ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcccCCccceeeeeecCCCCCcccccCcCCccCCCeEEEE
Confidence 9999 9999999999999999999999999999999999987 46788999999999998889999999999999999
Q ss_pred eecC
Q 042145 230 LQDD 233 (233)
Q Consensus 230 ~qd~ 233 (233)
+||+
T Consensus 242 ~qd~ 245 (356)
T 1gp6_A 242 LHNM 245 (356)
T ss_dssp EECS
T ss_pred EEcC
Confidence 9984
No 2
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=1.6e-45 Score=318.97 Aligned_cols=190 Identities=20% Similarity=0.308 Sum_probs=164.7
Q ss_pred CCCceEeCCCCCCccHHHHHHHHHHHhHhcceEEEeccCCChHHHHHHHHHHHHhhcCCHHHHhhccCCCCCCCcccccc
Q 042145 42 GSIPLIDLQVLDGPRRLDLIKQIGQACHHDGFFQVKNHGIPETIINNTLSIAGAFFKLPESERLKSYSDDPSKSKRLSTS 121 (233)
Q Consensus 42 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~~GY~~~ 121 (233)
.+||||||+.+.. ++++++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... ....+||...
T Consensus 5 ~~iPvIDls~~~~-~~~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~-~~~~~Gy~~~ 82 (312)
T 3oox_A 5 SAIDPVSFSLYAK-DFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGV-KGGARGYIPF 82 (312)
T ss_dssp CSSCCEETHHHHH-CHHHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSS-GGGTSEEECC
T ss_pred CCCCeEEChHhcc-cHHHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccC-CCCccccccc
Confidence 6899999998754 4788999999999999999999999999999999999999999999999999765 4678999543
Q ss_pred ccc--CCCCccccccccccccc-CC------CccCCCCCCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHH
Q 042145 122 FNV--NTKKVSNWRDYLRLHCY-PL------QDCMHEWPSNPPSF-EVVAEYCTSVRGLVLKLLEAISESMGLQRDYIDK 191 (233)
Q Consensus 122 ~~~--~~~~~~d~~E~~~~~~~-p~------~~~~~~wP~~~~~f-~~~~~y~~~~~~l~~~ll~~i~~~Lgl~~~~~~~ 191 (233)
... ......||+|.|.++.. +. ...+|.||+.+++| +.+++|+++|.+++.+|+++|+++||+++++|.+
T Consensus 83 g~e~~~~~~~~D~kE~~~~~~~~~~~~~~~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~ 162 (312)
T 3oox_A 83 GVETAKGADHYDLKEFWHMGRDLPPGHRFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLERDFFKP 162 (312)
T ss_dssp CCCCSTTSCSCCCCEEEEECCCCCTTCGGGGTSCCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTTHH
T ss_pred cceecCCCCCCCceeeeEeecCCCcCCcchhccCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHH
Confidence 221 23356899999998652 11 12368999999999 9999999999999999999999999999999999
Q ss_pred HhcCcCcceeEeeeCCCCCCCCcCCCCCccCCCceeEEeecC
Q 042145 192 ALGKHGQQMALNYCPPCPQPDLTYGLPGHTDPNLITVLLQDD 233 (233)
Q Consensus 192 ~~~~~~~~lrll~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~ 233 (233)
.+..+.+.||++|||||++++..+|+++|||+|+||||+||+
T Consensus 163 ~~~~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~g~lTlL~qd~ 204 (312)
T 3oox_A 163 TVQDGNSVLRLLHYPPIPKDATGVRAGAHGDINTITLLLGAE 204 (312)
T ss_dssp HHTTCCCEEEEEEECCCSSCCC--CEEEECCCSSEEEEECCT
T ss_pred HhcCCcceeeeEecCCCCCCcCCcCccceecCceEEEEeEcC
Confidence 998888899999999998765569999999999999999984
No 3
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=1.5e-44 Score=313.49 Aligned_cols=184 Identities=29% Similarity=0.551 Sum_probs=162.3
Q ss_pred CCCceEeCCCCCCccHHHHHHHHHHHhHhcceEEEeccCCChHHHHHHHHHHHHhhcCCHHHHhhccCCCCCCCcccccc
Q 042145 42 GSIPLIDLQVLDGPRRLDLIKQIGQACHHDGFFQVKNHGIPETIINNTLSIAGAFFKLPESERLKSYSDDPSKSKRLSTS 121 (233)
Q Consensus 42 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~~GY~~~ 121 (233)
.+||||||+.+...++.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... .+||...
T Consensus 2 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~----~~Gy~~~ 77 (319)
T 1w9y_A 2 ENFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVA----SKALEGV 77 (319)
T ss_dssp CCCCEEEGGGGGSTTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHTTC
T ss_pred CCCCEEECcccCcccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccC----CCCCCcc
Confidence 479999999986446789999999999999999999999999999999999999999999999997532 3488543
Q ss_pred cccCCCCcccccccccccccCCCccCCCCCCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHhcC---cC
Q 042145 122 FNVNTKKVSNWRDYLRLHCYPLQDCMHEWPSNPPSF-EVVAEYCTSVRGLVLKLLEAISESMGLQRDYIDKALGK---HG 197 (233)
Q Consensus 122 ~~~~~~~~~d~~E~~~~~~~p~~~~~~~wP~~~~~f-~~~~~y~~~~~~l~~~ll~~i~~~Lgl~~~~~~~~~~~---~~ 197 (233)
. ...+..||+|.|.++..|. ..+|.||+.++.| +.+++|+++|.+++..|+++|+++||+++++|.+.+.. +.
T Consensus 78 ~--~e~~~~d~ke~~~~~~~p~-~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~ 154 (319)
T 1w9y_A 78 Q--AEVTDMDWESTFFLKHLPI-SNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPN 154 (319)
T ss_dssp C--CCGGGCCCCEEEEEEEESC-CGGGGCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHHHHTTTCCE
T ss_pred c--ccCCCCChhhheeeecCCc-ccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCcCCcc
Confidence 2 2235789999999987653 2468999989999 99999999999999999999999999999999998763 55
Q ss_pred cceeEeeeCCCCCCCCcCCCCCccCCCceeEEeec
Q 042145 198 QQMALNYCPPCPQPDLTYGLPGHTDPNLITVLLQD 232 (233)
Q Consensus 198 ~~lrll~YPp~~~~~~~~g~~~HtD~g~lTlL~qd 232 (233)
+.||++|||||++++..+|+++|||+|+||||+||
T Consensus 155 ~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd 189 (319)
T 1w9y_A 155 FGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQD 189 (319)
T ss_dssp EEEEEEECCCCSCGGGGSSCCCBCCSSSEEEEEES
T ss_pred ceeEEEecCCCcccccccccccccCCCceEEEEec
Confidence 68999999999998888999999999999999996
No 4
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=5.3e-43 Score=302.89 Aligned_cols=177 Identities=15% Similarity=0.257 Sum_probs=143.6
Q ss_pred CCCceEeCCCCCCccHHHHHHHHHHHhHhcceEEEeccCCChHHHHHHHHHHHHhhcCC-HHHHhhccCCCCCCCccccc
Q 042145 42 GSIPLIDLQVLDGPRRLDLIKQIGQACHHDGFFQVKNHGIPETIINNTLSIAGAFFKLP-ESERLKSYSDDPSKSKRLST 120 (233)
Q Consensus 42 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~lp-~e~K~~~~~~~~~~~~GY~~ 120 (233)
.+||||||+.+.+++.. ++|.+||++||||||+||||+.++++++++++++||+|| .|+|+++........+||..
T Consensus 3 ~~iPvIDls~l~~~~~~---~~l~~A~~~~GFf~l~nHGi~~~l~~~~~~~~~~fF~lP~~e~K~~~~~~~~~~~~Gy~~ 79 (311)
T 1dcs_A 3 TTVPTFSLAELQQGLHQ---DEFRRCLRDKGLFYLTDCGLTDTELKSAKDLVIDFFEHGSEAEKRAVTSPVPTMRRGFTG 79 (311)
T ss_dssp CCCCEEEHHHHHTTCSH---HHHHHHHHHTCEEEEESSSCCHHHHHHHHHHHHHHHHHCCHHHHHHTBCSSCCSSSEEEE
T ss_pred CCCcEEEchhhcCCCHH---HHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHcCCcHHHhHHhhccCCCCCCceee
Confidence 68999999987544222 399999999999999999999999999999999999999 99999998765567899976
Q ss_pred cccc------CCCCcccccccccccccCCCccCCCCCCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHcCC----ChhHH
Q 042145 121 SFNV------NTKKVSNWRDYLRLHCYPLQDCMHEWPSNPPSF-EVVAEYCTSVRGLVLKLLEAISESMGL----QRDYI 189 (233)
Q Consensus 121 ~~~~------~~~~~~d~~E~~~~~~~p~~~~~~~wP~~~~~f-~~~~~y~~~~~~l~~~ll~~i~~~Lgl----~~~~~ 189 (233)
.... ...+..||+|.|.++.. +|.|| ++.| +.+++|+++|.+++..|+++|+++||+ ++++|
T Consensus 80 ~~~e~~~~~~~~~~~~d~~E~~~~~~~-----~n~wP--~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~f 152 (311)
T 1dcs_A 80 LESESTAQITNTGSYSDYSMCYSMGTA-----DNLFP--SGDFERIWTQYFDRQYTASRAVAREVLRATGTEPDGGVEAF 152 (311)
T ss_dssp C-----------------CEEEEECSS-----SCCCS--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCTTCHHHH
T ss_pred ccccccccccCCCCCCCcceeeeccCC-----CCCCC--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCcHhHH
Confidence 4322 22467899999999754 58899 8899 999999999999999999999999999 88888
Q ss_pred HHHhcCcCcceeEeeeCCCCCCC--C--cCCCCCccCCCceeEEeec
Q 042145 190 DKALGKHGQQMALNYCPPCPQPD--L--TYGLPGHTDPNLITVLLQD 232 (233)
Q Consensus 190 ~~~~~~~~~~lrll~YPp~~~~~--~--~~g~~~HtD~g~lTlL~qd 232 (233)
.+. .+.||++|||||++++ . .+|+++|||+|+||||+||
T Consensus 153 ~~~----~~~lrl~~YPp~~~~~~~~~~~~g~~~HtD~g~lTlL~qd 195 (311)
T 1dcs_A 153 LDC----EPLLRFRYFPQVPEHRSAEEQPLRMAPHYDLSMVTLIQQT 195 (311)
T ss_dssp HSC----CCEEEEEEECC-----------CCEEEEEECSSEEEEEEE
T ss_pred hhc----chhhheecCCCCCcccccCccccccccccCCCeEEEEecC
Confidence 765 6789999999998763 3 6889999999999999998
No 5
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=4.9e-42 Score=299.22 Aligned_cols=183 Identities=22% Similarity=0.354 Sum_probs=158.7
Q ss_pred CCCceEeCCCCCCc---cHHHHHHHHHHHhHhcceEEEeccCCChHHHHHHHHHHHHh-hcCCHHHHhhccCCCCCCCcc
Q 042145 42 GSIPLIDLQVLDGP---RRLDLIKQIGQACHHDGFFQVKNHGIPETIINNTLSIAGAF-FKLPESERLKSYSDDPSKSKR 117 (233)
Q Consensus 42 ~~iPvIDls~l~~~---~~~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~f-F~lp~e~K~~~~~~~~~~~~G 117 (233)
.+||||||+.|..+ ++.+++++|.+||++||||||+|||| +++++++.+++| |+||.|+|+++.. +|
T Consensus 7 ~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi---l~~~~~~~~~~F~F~lP~eeK~~~~~------~G 77 (331)
T 1odm_A 7 ANVPKIDVSPLFGDDQAAKMRVAQQIDAASRDTGFFYAVNHGI---NVQRLSQKTKEFHMSITPEEKWDLAI------RA 77 (331)
T ss_dssp CCCCEEECGGGGSSCHHHHHHHHHHHHHHHHTTSEEEEESCCC---CHHHHHHHHHHHHHHCCHHHHHHHBC------TT
T ss_pred CCCCEEEchHhcCCChHHHHHHHHHHHHHHHhCCEEEEEccce---eHHHHHHHHHhccCCCCHHHHHhhhh------cC
Confidence 57999999998654 46779999999999999999999999 899999999999 9999999999864 56
Q ss_pred ccccccc--CC------CCcccccccccccccCC-----------CccCCCCCCC--CCch-HHHHHHHHHHHHHHHHHH
Q 042145 118 LSTSFNV--NT------KKVSNWRDYLRLHCYPL-----------QDCMHEWPSN--PPSF-EVVAEYCTSVRGLVLKLL 175 (233)
Q Consensus 118 Y~~~~~~--~~------~~~~d~~E~~~~~~~p~-----------~~~~~~wP~~--~~~f-~~~~~y~~~~~~l~~~ll 175 (233)
|...... .. .+..||+|.|.++.... ...+|.||+. +++| +.+++|+++|.+++..|+
T Consensus 78 y~~~~~e~~~~~~~~~~~~~~d~kE~~~~~~~~~~~~p~~~~~~~~~~~n~wP~~~~~p~fr~~~~~y~~~~~~l~~~ll 157 (331)
T 1odm_A 78 YNKEHQDQVRAGYYLSIPGKKAVESFCYLNPNFTPDHPRIQAKTPTHEVNVWPDETKHPGFQDFAEQYYWDVFGLSSALL 157 (331)
T ss_dssp TCTTCTTCSSSEEECCBTTTBCCEEEEECCTTCCTTSHHHHTTCTTCCCCCCCCTTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcCCccccccccccccCCCCChhheEecccCCccccccccccccccCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHH
Confidence 6432211 11 25789999999975421 1347999987 8999 999999999999999999
Q ss_pred HHHHHHcCCChhHHHHHhcCcCccee--EeeeC------C---CCCCCC-cCCCCCccCCCceeEEeecC
Q 042145 176 EAISESMGLQRDYIDKALGKHGQQMA--LNYCP------P---CPQPDL-TYGLPGHTDPNLITVLLQDD 233 (233)
Q Consensus 176 ~~i~~~Lgl~~~~~~~~~~~~~~~lr--ll~YP------p---~~~~~~-~~g~~~HtD~g~lTlL~qd~ 233 (233)
++|+++||+++++|.+.++.+.+.|| ++||| | |++++. .+|+++|||+|+||||+||+
T Consensus 158 ~~la~~Lgl~~~~f~~~~~~~~~~lr~~l~~YP~~~~~~p~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~ 227 (331)
T 1odm_A 158 KGYALALGKEENFFARHFKPDDTLASVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVSLITVLYQSN 227 (331)
T ss_dssp HHHHHHTTSCTTTTGGGCCTTTCCCEEEEEEECCCSSCCGGGCEECTTSCEEEEEEECCSSSEEEEEECS
T ss_pred HHHHHHhCCCHHHHHHHhcCcHHHHHHHHhhCCCcccccccccCCCccccccccccccCCCeEEEEeeCC
Confidence 99999999999999999888888999 99999 8 777776 89999999999999999984
No 6
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=100.00 E-value=1.8e-40 Score=283.05 Aligned_cols=174 Identities=19% Similarity=0.275 Sum_probs=144.0
Q ss_pred CCCceEeCCCCCCccHHHHHHHHHHHhHhcceEEEeccCCChHHHHHHHHHHHHhhcCCHHHHhhccCCCCCCCcccccc
Q 042145 42 GSIPLIDLQVLDGPRRLDLIKQIGQACHHDGFFQVKNHGIPETIINNTLSIAGAFFKLPESERLKSYSDDPSKSKRLSTS 121 (233)
Q Consensus 42 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~~GY~~~ 121 (233)
++||||||+.. +.+++|.+||++||||||+||||+.++++++++.+++||++ |+|+++.... ...+||...
T Consensus 2 ~~IPvIDls~~------~~~~~l~~A~~~~GFF~v~nHGi~~~li~~~~~~~~~FF~l--e~K~k~~~~~-~~~~GY~~~ 72 (280)
T 3on7_A 2 MKLETIDYRAA------DSAKRFVESLRETGFGVLSNHPIDKELVERIYTEWQAFFNS--EAKNEFMFNR-ETHDGFFPA 72 (280)
T ss_dssp --CCEEETTST------THHHHHHHHHHHHSEEEEESCSSCHHHHHHHHHHHHHHHTS--GGGGGGBCCT-TTCCEEECC
T ss_pred CCCCEEECCCh------hHHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHhhh--HHHHHhccCC-CCCCccccC
Confidence 58999999973 35899999999999999999999999999999999999997 7899986653 568999654
Q ss_pred c---ccCCCCcccccccccccccCCCccCCCCCCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHcCCCh--hH---HHHH
Q 042145 122 F---NVNTKKVSNWRDYLRLHCYPLQDCMHEWPSNPPSF-EVVAEYCTSVRGLVLKLLEAISESMGLQR--DY---IDKA 192 (233)
Q Consensus 122 ~---~~~~~~~~d~~E~~~~~~~p~~~~~~~wP~~~~~f-~~~~~y~~~~~~l~~~ll~~i~~~Lgl~~--~~---~~~~ 192 (233)
. ........||+|.|.+. +||..++.| +.+++|+++|.+++.+|+++|+++||++. ++ |.+.
T Consensus 73 ~~~e~~~~~~~~D~kE~~~~~---------p~~~~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~~ 143 (280)
T 3on7_A 73 SISETAKGHTVKDIKEYYHVY---------PWGRIPDSLRANILAYYEKANTLASELLEWIETYSPDEIKAKFSIPLPEM 143 (280)
T ss_dssp C--------CCCCSCEEEEEC---------TTSCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHTTCSSCHHHH
T ss_pred ccccccCCCCcccHHHHHhcC---------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcchhhhhHHHHHH
Confidence 3 12223468999999873 377777899 99999999999999999999999999863 22 5666
Q ss_pred hcCcC-cceeEeeeCCCCCCC--CcCCCCCccCCCceeEEeecC
Q 042145 193 LGKHG-QQMALNYCPPCPQPD--LTYGLPGHTDPNLITVLLQDD 233 (233)
Q Consensus 193 ~~~~~-~~lrll~YPp~~~~~--~~~g~~~HtD~g~lTlL~qd~ 233 (233)
+..+. +.||++|||||+.++ ..+|+++|||+|+||||+||+
T Consensus 144 ~~~~~~~~lr~~~YP~~~~~~~~~~~g~~~HtD~g~lTlL~qd~ 187 (280)
T 3on7_A 144 IANSHKTLLRILHYPPMTGDEEMGAIRAAAHEDINLITVLPTAN 187 (280)
T ss_dssp HTTCSSCEEEEEEECCCCTTCCCCSEEEEEECCCSSEEEEECCS
T ss_pred hcCCccceEEEEECCCCCCccccCcccccCCCCCCeEEEEEecC
Confidence 66554 789999999998765 478999999999999999984
No 7
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=60.33 E-value=4.6 Score=34.97 Aligned_cols=51 Identities=6% Similarity=-0.010 Sum_probs=39.5
Q ss_pred CCceEeCCCCCCccHHHHHHHHHHHhHhcceEEEeccCCChHHHHHHHHHHHHhhc
Q 042145 43 SIPLIDLQVLDGPRRLDLIKQIGQACHHDGFFQVKNHGIPETIINNTLSIAGAFFK 98 (233)
Q Consensus 43 ~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~ 98 (233)
++|.||++.+.. .++.+.++.+++.++|++.+.+-.++.+ ...+.++.|=.
T Consensus 122 ~~~~~~~~~~l~--~d~~~~~~~~~l~~~Gvv~frg~~~~~~---~~~~~a~~~G~ 172 (388)
T 3o2g_A 122 QLPTLDFEDVLR--YDEHAYKWLSTLKKVGIVRLTGASDKPG---EVSKLGKRMGF 172 (388)
T ss_dssp CCCEEEHHHHHH--CHHHHHHHHHHHHHHSEEEEECCCSSTT---HHHHHHHHHSC
T ss_pred CCCccCHHHHhc--CHHHHHHHHHHHHhcCEEEEeCCCCCHH---HHHHHHHHhCC
Confidence 689999987653 2678899999999999999999988755 34455666543
No 8
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=59.35 E-value=10 Score=30.93 Aligned_cols=50 Identities=16% Similarity=0.117 Sum_probs=38.3
Q ss_pred CCCceEeCCCCCCccHHHHHHHHHHHhHhcceEEEeccCCChHHHHHHHHHHHHhh
Q 042145 42 GSIPLIDLQVLDGPRRLDLIKQIGQACHHDGFFQVKNHGIPETIINNTLSIAGAFF 97 (233)
Q Consensus 42 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF 97 (233)
++|+-||++...+ .+..++|.+++.++|++.+.+-.++.+ +..+.++.|=
T Consensus 16 aei~gvdl~~~l~---~~~~~~l~~~l~~~Gvv~frg~~~~~~---~~~~~~~~~G 65 (283)
T 1otj_A 16 AQISGADLTRPLS---DNQFEQLYHAVLRHQVVFLRDQAITPQ---QQRALAQRFG 65 (283)
T ss_dssp EEEESCCSSSCCC---HHHHHHHHHHHHHHSEEEECSCCCCHH---HHHHHHHTTS
T ss_pred EEEECCCcCccCC---HHHHHHHHHHHHHCCEEEECCCCCCHH---HHHHHHHHhC
Confidence 6788889988543 467899999999999999999888765 3445555553
No 9
>2da7_A Zinc finger homeobox protein 1B; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=57.39 E-value=5.1 Score=26.02 Aligned_cols=40 Identities=18% Similarity=0.225 Sum_probs=35.5
Q ss_pred Cch-HHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHhc
Q 042145 155 PSF-EVVAEYCTSVRGLVLKLLEAISESMGLQRDYIDKALG 194 (233)
Q Consensus 155 ~~f-~~~~~y~~~~~~l~~~ll~~i~~~Lgl~~~~~~~~~~ 194 (233)
... ..+++||..-.+-...-+..||..+||+.+.+..+|.
T Consensus 14 k~ql~~Lk~yF~~n~~Ps~eei~~LA~~lgL~~~VVrVWFq 54 (71)
T 2da7_A 14 KDHMSVLKAYYAMNMEPNSDELLKISIAVGLPQEFVKEWFE 54 (71)
T ss_dssp THHHHHHHHHHHHCSSCCHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCHHHHHHHHh
Confidence 345 8899999999999999999999999999999888874
No 10
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=56.36 E-value=4.9 Score=35.68 Aligned_cols=55 Identities=9% Similarity=0.113 Sum_probs=40.1
Q ss_pred CCCCCCceEeCCCCCCccHHHHHHHHHHHhHhcceEEEeccCCChHHHHHHHHHHHHhhc
Q 042145 39 ISDGSIPLIDLQVLDGPRRLDLIKQIGQACHHDGFFQVKNHGIPETIINNTLSIAGAFFK 98 (233)
Q Consensus 39 ~~~~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~ 98 (233)
++ .-||+||++.+.++ ..-+...+.+++.|++.|.|. |+.+...+..+...+|.+
T Consensus 97 G~-~~iP~i~f~di~~~---~~s~~~~~~ir~rG~vVIRgv-vp~e~A~~~~~~~~~yl~ 151 (461)
T 2dbn_A 97 GD-AVWPVLSYADIKAG---HVTAEQREQIKRRGCAVIKGH-FPREQALGWDQSMLDYLD 151 (461)
T ss_dssp TC-CSSCEEEHHHHHHT---CCCHHHHHHHHHHSEEEEETS-SCHHHHHHHHHHHHHHHH
T ss_pred CC-CCcceecHHHhcCC---CCCHHHHHHHHhccEEEECCC-CCHHHHHHHHHHHHHHHH
Confidence 44 68999999986432 122455578899999999987 888877777766666654
No 11
>3m0z_A Putative aldolase; MCSG, PSI-2, structural genomics, protein structure initiative, midwest center for structural genomics, lyase; HET: MSE; 1.20A {Klebsiella pneumoniae subsp} PDB: 3nzr_A 3lm7_A
Probab=56.02 E-value=21 Score=28.70 Aligned_cols=39 Identities=21% Similarity=0.296 Sum_probs=31.7
Q ss_pred cHHHHHHHHHHHhHhcceEEEecc-CCChHHHHHHHHHHHH
Q 042145 56 RRLDLIKQIGQACHHDGFFQVKNH-GIPETIINNTLSIAGA 95 (233)
Q Consensus 56 ~~~~~~~~l~~A~~~~GFf~l~nh-gi~~~~~~~~~~~~~~ 95 (233)
...++.+.+.+||.+.|| ++.-. ||+.+-...+.+.+.+
T Consensus 171 ~~l~E~~avAka~a~~g~-~lEPTGGIdl~N~~~I~~i~l~ 210 (249)
T 3m0z_A 171 KHRAEFEAVAKACAAHDF-WLEPTGGIDLENYSEILKIALD 210 (249)
T ss_dssp TTHHHHHHHHHHHHHTTC-EEEEBSSCCTTTHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcCc-eECCCCCccHhhHHHHHHHHHH
Confidence 468899999999999999 77766 5998877777776654
No 12
>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*
Probab=55.54 E-value=13 Score=30.47 Aligned_cols=50 Identities=16% Similarity=0.115 Sum_probs=39.4
Q ss_pred CCCceEeCCCCCCccHHHHHHHHHHHhHhcceEEEeccCCChHHHHHHHHHHHHhh
Q 042145 42 GSIPLIDLQVLDGPRRLDLIKQIGQACHHDGFFQVKNHGIPETIINNTLSIAGAFF 97 (233)
Q Consensus 42 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF 97 (233)
++|.=||++...+ ++..++|.+++.++|+..+.+-.++.+ +..+.++.|=
T Consensus 14 aei~gvdl~~~l~---~~~~~~l~~~l~~~gvv~fR~q~l~~~---~~~~fa~~fG 63 (277)
T 3pvj_A 14 AQISGVDISRDIS---AEERDAIEQALLQHQVLFLRDQPINPE---QQARFAARFG 63 (277)
T ss_dssp EEEESCCTTSCCC---HHHHHHHHHHHHHHSEEEESSCCCCHH---HHHHHHGGGS
T ss_pred EEEeCCCccccCC---HHHHHHHHHHHHHCCEEEECCCCCCHH---HHHHHHHHhC
Confidence 6788899988433 577899999999999999999888764 4445666653
No 13
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=54.88 E-value=33 Score=28.82 Aligned_cols=47 Identities=11% Similarity=0.010 Sum_probs=36.6
Q ss_pred CCCccHHHHHHHHHHHhHhcceEEEeccCCC----hHHHHHHHHHHHHhhc
Q 042145 52 LDGPRRLDLIKQIGQACHHDGFFQVKNHGIP----ETIINNTLSIAGAFFK 98 (233)
Q Consensus 52 l~~~~~~~~~~~l~~A~~~~GFf~l~nhgi~----~~~~~~~~~~~~~fF~ 98 (233)
|..+..++..+++.+.++.-||+.-.+|||+ .+.++.+.+++++|++
T Consensus 298 l~~g~~e~i~~~v~~~l~~~g~I~~~Ghgi~p~tp~env~a~v~av~ey~A 348 (348)
T 4ay7_A 298 LLPGPVDKIKAEAKEALEGGIDVLAPGCGIAPMTPLENVKALVAARDEFYA 348 (348)
T ss_dssp CTTCCHHHHHHHHHHHHHTTCSEEEESSSCCTTCCHHHHHHHHHHHHHHTC
T ss_pred hcCCCHHHHHHHHHHHHhCCCCEEeCCCccCCCCCHHHHHHHHHHHHHhcC
Confidence 3334566777778888888888777789975 5789999999999985
No 14
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=51.59 E-value=16 Score=30.06 Aligned_cols=51 Identities=10% Similarity=0.037 Sum_probs=39.2
Q ss_pred CCCceEeCCCCCCccHHHHHHHHHHHhHhcceEEEeccC-CChHHHHHHHHHHHHhhc
Q 042145 42 GSIPLIDLQVLDGPRRLDLIKQIGQACHHDGFFQVKNHG-IPETIINNTLSIAGAFFK 98 (233)
Q Consensus 42 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFf~l~nhg-i~~~~~~~~~~~~~~fF~ 98 (233)
++|+-||++...+ .+..++|.+++.++|++.+.+-. ++. ++..+.++.|-.
T Consensus 26 aei~gvdl~~~l~---~~~~~~l~~~l~~~Gvv~fRg~~~l~~---~~~~~~~~~fG~ 77 (301)
T 1oih_A 26 AEIRGVKLSPDLD---AATVEAIQAALVRHKVIFFRGQTHLDD---QSQEGFAKLLGE 77 (301)
T ss_dssp EEEESCCCCTTCC---HHHHHHHHHHHHHHSEEEECCCTTCCH---HHHHHHHHTTSC
T ss_pred eEEeCCCccccCC---HHHHHHHHHHHHHCCEEEECCCCCCCH---HHHHHHHHHhCC
Confidence 6788889988543 46789999999999999999987 875 355566666543
No 15
>1m5a_B Insulin B chain; alpha helices, beta sheets, 3(10) helices, disulphide bridge hormone-growth factor complex; 1.20A {Sus scrofa} SCOP: g.1.1.1 PDB: 1aph_B 1b18_B 1b19_B 1b2a_B 1b2b_B 1b2c_B 1b2d_B 1b2e_B 1b2f_B 1b2g_B 1bph_B 1cph_B 1dph_B 1b17_B 1mpj_B 1wav_B 1zni_B 2a3g_B 2bn1_B 2bn3_B ...
Probab=48.42 E-value=21 Score=19.02 Aligned_cols=19 Identities=26% Similarity=0.576 Sum_probs=16.7
Q ss_pred HHHHHHHHHHhHhcceEEE
Q 042145 58 LDLIKQIGQACHHDGFFQV 76 (233)
Q Consensus 58 ~~~~~~l~~A~~~~GFf~l 76 (233)
...++.|.-.|.+-||||.
T Consensus 9 s~LVdaL~~vCgdRGF~~~ 27 (30)
T 1m5a_B 9 SHLVEALYLVCGERGFFYT 27 (30)
T ss_dssp HHHHHHHHHHHGGGCEEEC
T ss_pred HHHHHHHHHHhccCccccC
Confidence 5788899999999999984
No 16
>2opi_A L-fuculose-1-phosphate aldolase; L-fuculose-1-phosphate aldolas structural genomics, PSI-2, protein structure initiative; 2.50A {Bacteroides thetaiotaomicron}
Probab=48.41 E-value=13 Score=29.21 Aligned_cols=36 Identities=25% Similarity=0.298 Sum_probs=29.4
Q ss_pred CCceEeCCCCCCccHHHHHHHHHHHhHhcceEEEeccCC
Q 042145 43 SIPLIDLQVLDGPRRLDLIKQIGQACHHDGFFQVKNHGI 81 (233)
Q Consensus 43 ~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFf~l~nhgi 81 (233)
.||++++...- ..+.++++.+++.+.-.+.+.|||+
T Consensus 125 ~v~~~~y~~~g---~~~la~~i~~~l~~~~avll~nHG~ 160 (212)
T 2opi_A 125 EIPVIPYYRPG---SPELAKAVVEAMLKHNSVLLTNHGQ 160 (212)
T ss_dssp CCCEECCCCTT---CHHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CeEEEcCCCCC---cHHHHHHHHHHhccCCEEEEcCCCc
Confidence 79999987542 3577889999998888999999995
No 17
>3m6y_A 4-hydroxy-2-oxoglutarate aldolase; structural genomics, MCSG, lyase, PSI-2, protein structure initiative; HET: MSE; 1.45A {Bacillus cereus} PDB: 3n73_A 3mux_A
Probab=48.38 E-value=22 Score=28.94 Aligned_cols=39 Identities=21% Similarity=0.420 Sum_probs=31.7
Q ss_pred cHHHHHHHHHHHhHhcceEEEecc-CCChHHHHHHHHHHHH
Q 042145 56 RRLDLIKQIGQACHHDGFFQVKNH-GIPETIINNTLSIAGA 95 (233)
Q Consensus 56 ~~~~~~~~l~~A~~~~GFf~l~nh-gi~~~~~~~~~~~~~~ 95 (233)
...++.+.+.+||.+.|| ++.-. ||+.+-...+.+.+.+
T Consensus 194 ~~leEl~avAkAca~~g~-~lEPTGGIdl~Nf~~I~~i~l~ 233 (275)
T 3m6y_A 194 AHEEEYRAVAKACAEEGF-ALEPTGGIDKENFETIVRIALE 233 (275)
T ss_dssp TTHHHHHHHHHHHHHHTC-EEEEBSSCCTTTHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcCc-eECCCCCccHhHHHHHHHHHHH
Confidence 468899999999999999 77766 5998877777776654
No 18
>2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2flf_A
Probab=46.90 E-value=26 Score=27.18 Aligned_cols=36 Identities=14% Similarity=0.259 Sum_probs=28.8
Q ss_pred CCceE-eCCCCCCccHHHHHHHHHHHhHhcceEEEeccCC
Q 042145 43 SIPLI-DLQVLDGPRRLDLIKQIGQACHHDGFFQVKNHGI 81 (233)
Q Consensus 43 ~iPvI-Dls~l~~~~~~~~~~~l~~A~~~~GFf~l~nhgi 81 (233)
.||++ ++... ..++.++++.+++.+.-.+.+.|||+
T Consensus 117 ~ip~~~~y~~~---g~~ela~~i~~~l~~~~avll~nHG~ 153 (200)
T 2fk5_A 117 EVPVLAPKTVS---ATEEAALSVAEALREHRACLLRGHGA 153 (200)
T ss_dssp CEEEECCSCCS---SSHHHHHHHHHHHHHCSEEEETTTEE
T ss_pred CceEecCCCCC---CcHHHHHHHHHHhCcCCEEEECCCCc
Confidence 79999 77543 23578888999998888999999994
No 19
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=46.72 E-value=15 Score=29.65 Aligned_cols=41 Identities=12% Similarity=0.169 Sum_probs=35.5
Q ss_pred HHHHHHHHHHhHhcceEEEeccCCChHHHHHHHHHHHHhhc
Q 042145 58 LDLIKQIGQACHHDGFFQVKNHGIPETIINNTLSIAGAFFK 98 (233)
Q Consensus 58 ~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~ 98 (233)
++..++|.++|++.++++.-|-++...++.++.+.+.++|.
T Consensus 88 ~e~~~~l~~aa~~~~v~~a~N~S~Gv~l~~~~~~~aa~~l~ 128 (243)
T 3qy9_A 88 EKLLNKLDELSQNMPVFFSANMSYGVHALTKILAAAVPLLD 128 (243)
T ss_dssp HHHHHHHHHHTTTSEEEECSSCCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhcCCEEEECCccHHHHHHHHHHHHHHHhcC
Confidence 55689999999999999999999999998888887777774
No 20
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=46.57 E-value=15 Score=30.19 Aligned_cols=38 Identities=16% Similarity=0.101 Sum_probs=21.7
Q ss_pred HHHHHHHHhHhcceEEEeccCCChHHHHHHHHHHHHhh
Q 042145 60 LIKQIGQACHHDGFFQVKNHGIPETIINNTLSIAGAFF 97 (233)
Q Consensus 60 ~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF 97 (233)
..++|.++|++.+.+|..|-++...++.++.+.+.++|
T Consensus 111 ~~~~L~~aa~~~~vv~a~N~s~Gv~l~~~~~~~aa~~l 148 (272)
T 4f3y_A 111 QKAQLRAAGEKIALVFSANMSVGVNVTMKLLEFAAKQF 148 (272)
T ss_dssp HHHHHHHHTTTSEEEECSCCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhccCCEEEECCCCHHHHHHHHHHHHHHHhc
Confidence 34555666666666666665555555555555555554
No 21
>3r1j_A Alpha-ketoglutarate-dependent taurine dioxygenase; ssgcid, oxidoreductase, structural genomics; 2.05A {Mycobacterium avium} SCOP: b.82.2.0 PDB: 3swt_A
Probab=46.34 E-value=23 Score=29.44 Aligned_cols=50 Identities=12% Similarity=0.055 Sum_probs=38.3
Q ss_pred CCCceEeCCCCCCccHHHHHHHHHHHhHhcceEEEecc-CCChHHHHHHHHHHHHhh
Q 042145 42 GSIPLIDLQVLDGPRRLDLIKQIGQACHHDGFFQVKNH-GIPETIINNTLSIAGAFF 97 (233)
Q Consensus 42 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFf~l~nh-gi~~~~~~~~~~~~~~fF 97 (233)
++|+=||++...+ ++..++|.+++.++|.+.+.+- .++.+ +..+.++.|=
T Consensus 20 aei~gvdl~~~L~---d~~~~~l~~al~~~gvv~fR~q~~l~~~---~~~~fa~~fG 70 (301)
T 3r1j_A 20 ARVDGVRLGGDLD---DATVEQIRRALLTHKVIFFRHQHHLDDS---RQLEFARLLG 70 (301)
T ss_dssp EEEESCCCSTTCC---HHHHHHHHHHHHHHSEEEECCCTTCCHH---HHHHHHHHHS
T ss_pred ceEeCCCccccCC---HHHHHHHHHHHHHCCEEEECCCCCCCHH---HHHHHHHhcC
Confidence 6788899985332 5778999999999999999998 77765 4445666653
No 22
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=44.17 E-value=17 Score=30.10 Aligned_cols=37 Identities=14% Similarity=0.121 Sum_probs=15.9
Q ss_pred HHHHHHHhHhcceEEEeccCCChHHHHHHHHHHHHhh
Q 042145 61 IKQIGQACHHDGFFQVKNHGIPETIINNTLSIAGAFF 97 (233)
Q Consensus 61 ~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF 97 (233)
.++|.++|++.++++..|-++...++.++.+.+.++|
T Consensus 127 ~~~L~~aa~~~~~~~a~N~SiGv~ll~~l~~~aa~~l 163 (288)
T 3ijp_A 127 EAQIADFAKYTTIVKSGNMSLGVNLLANLVKRAAKAL 163 (288)
T ss_dssp HHHHHHHHTTSEEEECSCCCHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHhCcCCEEEECCCcHHHHHHHHHHHHHHHhc
Confidence 3444444444444444444444444444444333333
No 23
>1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial L-fucose metabolism; 1.66A {Escherichia coli} SCOP: c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P 1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P 1dzw_P 1e49_P 1e4a_P
Probab=40.31 E-value=19 Score=28.16 Aligned_cols=36 Identities=19% Similarity=0.323 Sum_probs=29.1
Q ss_pred CCceEeCCCCCCccHHHHHHHHHHHhHhcceEEEeccCC
Q 042145 43 SIPLIDLQVLDGPRRLDLIKQIGQACHHDGFFQVKNHGI 81 (233)
Q Consensus 43 ~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFf~l~nhgi 81 (233)
.||++++...- ..+.++.+.+++.+.-.+.+.|||+
T Consensus 122 ~ip~~~y~~~g---~~~la~~i~~~l~~~~avll~nHG~ 157 (215)
T 1e4c_P 122 SIPCAPYATFG---TRELSEHVALALKNRKATLLQHHGL 157 (215)
T ss_dssp CBCEECCCCTT---CHHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CcceeeCCCCC---cHHHHHHHHHHhccCCEEEEcCCCc
Confidence 79999986542 2577888999998888899999995
No 24
>1pvt_A Sugar-phosphate aldolase; structural genomics, PSI, protein initiative, midwest center for structural genomics, MCSG; 2.50A {Thermotoga maritima} SCOP: c.74.1.1
Probab=40.07 E-value=25 Score=27.95 Aligned_cols=37 Identities=11% Similarity=0.201 Sum_probs=29.8
Q ss_pred CCCceEeCCCCCCccHHHHHHHHHHHhHhcceEEEeccCC
Q 042145 42 GSIPLIDLQVLDGPRRLDLIKQIGQACHHDGFFQVKNHGI 81 (233)
Q Consensus 42 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFf~l~nhgi 81 (233)
..||++++...- ..+.++++.+++.+.-.+.+.|||+
T Consensus 160 ~~v~~~~y~~~g---~~ela~~i~~~l~~~~avll~nHG~ 196 (238)
T 1pvt_A 160 QGISVVEFEKPG---SVELGLKTVEKSEGKDAVLWDKHGV 196 (238)
T ss_dssp SCCEEECCCSTT---CHHHHHHHHHHTSSCSEEEETTSCE
T ss_pred CCceEecCCCCC---cHHHHHHHHHHhccCCEEEEcCCCc
Confidence 469999986532 3577888999998888999999995
No 25
>2irp_A Putative aldolase class 2 protein AQ_1979; aldehyde, enzymatic mechanism; 2.40A {Aquifex aeolicus}
Probab=37.94 E-value=22 Score=27.66 Aligned_cols=35 Identities=20% Similarity=0.320 Sum_probs=27.4
Q ss_pred CCceEeCCCCCCccHHHHHHHHHHHhHhcc---eEEEeccCC
Q 042145 43 SIPLIDLQVLDGPRRLDLIKQIGQACHHDG---FFQVKNHGI 81 (233)
Q Consensus 43 ~iPvIDls~l~~~~~~~~~~~l~~A~~~~G---Ff~l~nhgi 81 (233)
.||+++... +.++.++.+.+++.+.+ .+.+.|||+
T Consensus 139 ~vp~~~~~~----g~~~La~~i~~~l~~~~~~~avll~nHG~ 176 (208)
T 2irp_A 139 KIPIFPNEQ----NIPLLAKEVENYFKTSEDKYGFLIRGHGL 176 (208)
T ss_dssp EEEEECCCS----CHHHHHHHHHHHHHHCSCCSCEEETTTEE
T ss_pred ceeeecCCC----CHHHHHHHHHHHHhcCCCceEEEEcCCCC
Confidence 689988742 35678888999998765 788999995
No 26
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=37.00 E-value=36 Score=20.13 Aligned_cols=24 Identities=21% Similarity=0.446 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHHHHcCCChhH
Q 042145 165 TSVRGLVLKLLEAISESMGLQRDY 188 (233)
Q Consensus 165 ~~~~~l~~~ll~~i~~~Lgl~~~~ 188 (233)
.+-.+++..|.+.+++.||.|++.
T Consensus 17 e~k~~l~~~l~~~l~~~lg~p~~~ 40 (63)
T 2x4k_A 17 EQLKNLVSEVTDAVEKTTGANRQA 40 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCGGG
T ss_pred HHHHHHHHHHHHHHHHHhCcCccc
Confidence 345688899999999999999754
No 27
>3ocr_A Class II aldolase/adducin domain protein; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, lyase; 1.95A {Pseudomonas syringae PV}
Probab=34.87 E-value=26 Score=28.71 Aligned_cols=38 Identities=13% Similarity=0.237 Sum_probs=30.4
Q ss_pred CCCceEeCCCCCCccHHHHHHHHHHHhHhcceEEEeccCC
Q 042145 42 GSIPLIDLQVLDGPRRLDLIKQIGQACHHDGFFQVKNHGI 81 (233)
Q Consensus 42 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFf~l~nhgi 81 (233)
..||++|+..+.. ..++.++|.+++.+.-.+.+.|||+
T Consensus 155 g~v~~~~y~~~~~--~~el~~~i~~~l~~~~avlL~nHG~ 192 (273)
T 3ocr_A 155 GRVAYHGYEGIAL--DLSERERLVADLGDKSVMILRNHGL 192 (273)
T ss_dssp TTEEEECCCCSSC--CHHHHHHHHHHHTTCSEEEETTTEE
T ss_pred CCEEEECCCCCCC--CHHHHHHHHHHhCcCCEEEEcCCce
Confidence 3689998876431 3577889999999999999999995
No 28
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=34.21 E-value=43 Score=19.82 Aligned_cols=24 Identities=33% Similarity=0.447 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHHHHHcCCChhH
Q 042145 165 TSVRGLVLKLLEAISESMGLQRDY 188 (233)
Q Consensus 165 ~~~~~l~~~ll~~i~~~Lgl~~~~ 188 (233)
++-.+++..|.+.+.+.||++++.
T Consensus 14 eqk~~l~~~i~~~l~~~lg~~~~~ 37 (61)
T 2opa_A 14 EQKRNLVEKVTEAVKETTGASEEK 37 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCGGG
T ss_pred HHHHHHHHHHHHHHHHHhCcCcCe
Confidence 355688899999999999998753
No 29
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=34.13 E-value=42 Score=19.88 Aligned_cols=24 Identities=17% Similarity=0.234 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHHHHcCCChhH
Q 042145 165 TSVRGLVLKLLEAISESMGLQRDY 188 (233)
Q Consensus 165 ~~~~~l~~~ll~~i~~~Lgl~~~~ 188 (233)
++-.+++..|.+.+.+.||++++.
T Consensus 14 e~k~~l~~~i~~~l~~~lg~p~~~ 37 (62)
T 1otf_A 14 EQKETLIRQVSEAMANSLDAPLER 37 (62)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGG
T ss_pred HHHHHHHHHHHHHHHHHhCcCccc
Confidence 355688899999999999999753
No 30
>2v9l_A Rhamnulose-1-phosphate aldolase; entropy index, metal-binding, oligomerization, zinc, lyase, class II, cytoplasm; HET: PGO; 1.23A {Escherichia coli} PDB: 2uyv_A* 1ojr_A 2v9g_A* 1gt7_A* 2v9n_A* 2uyu_A* 2v9m_A* 2v9o_A 2v9e_A 2v9f_A 2v9i_A 2v29_A 2v2a_A* 2v2b_A
Probab=33.40 E-value=26 Score=28.59 Aligned_cols=36 Identities=11% Similarity=0.136 Sum_probs=29.2
Q ss_pred CCceEeCCCCCCccHHHHHHHHHHHhHhcceEEEeccCC
Q 042145 43 SIPLIDLQVLDGPRRLDLIKQIGQACHHDGFFQVKNHGI 81 (233)
Q Consensus 43 ~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFf~l~nhgi 81 (233)
.||++++... ...+.++++.+++.+.-.+.+.|||+
T Consensus 179 ~v~v~~y~~~---g~~ela~~i~~~l~~~~avll~nHG~ 214 (274)
T 2v9l_A 179 GVGILPWMVP---GTDAIGQATAQEMQKHSLVLWPFHGV 214 (274)
T ss_dssp CEEECCCCCS---SSHHHHHHHHHHHTTCSEEEETTTEE
T ss_pred ceeEecCCCC---CCHHHHHHHHHHHccCCEEEEcCCCc
Confidence 6899887643 23578889999999888999999995
No 31
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=32.96 E-value=49 Score=19.75 Aligned_cols=23 Identities=30% Similarity=0.293 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHHHHHcCCChhH
Q 042145 166 SVRGLVLKLLEAISESMGLQRDY 188 (233)
Q Consensus 166 ~~~~l~~~ll~~i~~~Lgl~~~~ 188 (233)
+-.++...|.+.+++.||.++++
T Consensus 16 qk~~l~~~lt~~l~~~lg~~~~~ 38 (64)
T 3abf_A 16 KKRELVRRLTEMASRLLGEPYEE 38 (64)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGG
T ss_pred HHHHHHHHHHHHHHHHhCCCccc
Confidence 45678889999999999999754
No 32
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=31.94 E-value=55 Score=26.12 Aligned_cols=40 Identities=13% Similarity=0.093 Sum_probs=28.6
Q ss_pred HHHHHHHHHHhHhcceEEEeccCCChHHHHHHHHHHHHhh
Q 042145 58 LDLIKQIGQACHHDGFFQVKNHGIPETIINNTLSIAGAFF 97 (233)
Q Consensus 58 ~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF 97 (233)
++..++|.+++++.++++.-|-++...++.++.+.+.++|
T Consensus 89 ~~~~~~l~~~a~~~~vv~apNfSlGvnll~~l~~~aA~~l 128 (228)
T 1vm6_A 89 EEHLQMLRELSKEVPVVQAYNFSIGINVLKRFLSELVKVL 128 (228)
T ss_dssp HHHHHHHHHHTTTSEEEECSCCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhhCCEEEeccccHHHHHHHHHHHHHHHhc
Confidence 3445677777777777777777777777777777666666
No 33
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=30.75 E-value=33 Score=24.39 Aligned_cols=37 Identities=14% Similarity=0.235 Sum_probs=27.6
Q ss_pred ceEeCCCCCCccHHHHHHHHHHHhHhcceEEEeccCCChH
Q 042145 45 PLIDLQVLDGPRRLDLIKQIGQACHHDGFFQVKNHGIPET 84 (233)
Q Consensus 45 PvIDls~l~~~~~~~~~~~l~~A~~~~GFf~l~nhgi~~~ 84 (233)
=|||++.+... ....+|.+.|+++|+..+--.|.+.+
T Consensus 50 VVlDl~~l~~~---~dl~~L~~~l~~~gl~~vGV~g~~~~ 86 (120)
T 3ghf_A 50 VVINVSGLESP---VNWPELHKIVTSTGLRIIGVSGCKDA 86 (120)
T ss_dssp EEEEEEECCSS---CCHHHHHHHHHTTTCEEEEEESCCCH
T ss_pred EEEEccccCCh---HHHHHHHHHHHHcCCEEEEEeCCCcH
Confidence 36799887522 23678999999999999877776544
No 34
>3ry0_A Putative tautomerase; oxalocrotonate tautomerase family, isomerase; 1.40A {Streptomyces achromogenes}
Probab=28.90 E-value=59 Score=19.74 Aligned_cols=24 Identities=25% Similarity=0.232 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHHHHHcCCChhH
Q 042145 165 TSVRGLVLKLLEAISESMGLQRDY 188 (233)
Q Consensus 165 ~~~~~l~~~ll~~i~~~Lgl~~~~ 188 (233)
++-++|+..|.+.+.+.||++++.
T Consensus 14 eqk~~L~~~it~~~~~~lg~p~~~ 37 (65)
T 3ry0_A 14 QEVAALGEALTAAAHETLGTPVEA 37 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCGGG
T ss_pred HHHHHHHHHHHHHHHHHhCcCccc
Confidence 456788999999999999999754
No 35
>3m21_A Probable tautomerase HP_0924; 4-oxalocrotonate tautomerase, catalytic proline, hexamer, BE beta, isomerase; 1.90A {Helicobacter pylori} PDB: 2orm_A
Probab=26.10 E-value=70 Score=19.54 Aligned_cols=24 Identities=4% Similarity=0.104 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHHHHHcCCChhH
Q 042145 165 TSVRGLVLKLLEAISESMGLQRDY 188 (233)
Q Consensus 165 ~~~~~l~~~ll~~i~~~Lgl~~~~ 188 (233)
.+-.+|...|.+.+++.||++++.
T Consensus 17 eqK~~l~~~lt~~l~~~lg~p~~~ 40 (67)
T 3m21_A 17 EQKQQLIEGVSDLMVKVLNKNKAS 40 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCGGG
T ss_pred HHHHHHHHHHHHHHHHHHCcCccc
Confidence 455688888999999999998754
No 36
>1gyx_A YDCE, B1461, hypothetical protein YDCE; tautomerase, isomerase, complete proteo; HET: EPE; 1.35A {Escherichia coli} SCOP: d.80.1.1 PDB: 1gyj_A* 1gyy_A*
Probab=26.10 E-value=67 Score=20.29 Aligned_cols=25 Identities=12% Similarity=0.181 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHHHHHHcCCChhHH
Q 042145 165 TSVRGLVLKLLEAISESMGLQRDYI 189 (233)
Q Consensus 165 ~~~~~l~~~ll~~i~~~Lgl~~~~~ 189 (233)
++-.+++..|.+.+.+.||++++.+
T Consensus 15 eqk~~L~~~l~~~l~~~lgip~~~v 39 (76)
T 1gyx_A 15 QQKAALAADITDVIIRHLNSKDSSI 39 (76)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGC
T ss_pred HHHHHHHHHHHHHHHHHhCcCCceE
Confidence 4557889999999999999998643
No 37
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=24.85 E-value=58 Score=26.45 Aligned_cols=37 Identities=14% Similarity=0.120 Sum_probs=18.2
Q ss_pred HHHHHHHhHhcceEEEeccCCChHHHHHHHHHHHHhh
Q 042145 61 IKQIGQACHHDGFFQVKNHGIPETIINNTLSIAGAFF 97 (233)
Q Consensus 61 ~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF 97 (233)
.++|.+++++.|.++..|.++...++.++.+.+.++|
T Consensus 111 ~~~L~~~a~~~~vv~a~N~siGvn~~~~l~~~aa~~~ 147 (273)
T 1dih_A 111 KQAIRDAAADIAIVFAANFSVGVNVMLKLLEKAAKVM 147 (273)
T ss_dssp HHHHHHHTTTSCEEECSCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCEEEEecCcHHHHHHHHHHHHHHHhc
Confidence 4455555555555555555544444444444444444
No 38
>3mb2_A 4-oxalocrotonate tautomerase family enzyme - ALPH; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, hydrolase; 2.41A {Chloroflexus aurantiacus}
Probab=23.47 E-value=81 Score=19.58 Aligned_cols=24 Identities=13% Similarity=0.034 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHHHHcCCChhH
Q 042145 165 TSVRGLVLKLLEAISESMGLQRDY 188 (233)
Q Consensus 165 ~~~~~l~~~ll~~i~~~Lgl~~~~ 188 (233)
++-.+|...|.+.+++.||++++.
T Consensus 15 eqK~~L~~~it~~l~~~lg~p~~~ 38 (72)
T 3mb2_A 15 EQKAELARALSAAAAAAFDVPLAE 38 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGG
T ss_pred HHHHHHHHHHHHHHHHHhCCCccc
Confidence 455688889999999999999754
No 39
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=22.49 E-value=69 Score=25.65 Aligned_cols=39 Identities=15% Similarity=0.174 Sum_probs=27.1
Q ss_pred HHHHHHHHHhH---hcceEEEeccCCChHHHHHHHHHHHHhh
Q 042145 59 DLIKQIGQACH---HDGFFQVKNHGIPETIINNTLSIAGAFF 97 (233)
Q Consensus 59 ~~~~~l~~A~~---~~GFf~l~nhgi~~~~~~~~~~~~~~fF 97 (233)
+..++|.++|+ ..++++..|-++...++.++.+.+.++|
T Consensus 82 e~~~~l~~aa~~~~~~~vv~a~N~siGv~ll~~l~~~aa~~~ 123 (245)
T 1p9l_A 82 ERFQQVESWLVAKPNTSVLIAPNFAIGAVLSMHFAKQAARFF 123 (245)
T ss_dssp HHHHHHHHHHHTSTTCEEEECSCCCHHHHHHHHHHHHHGGGC
T ss_pred HHHHHHHHHHHhCCCCCEEEECCccHHHHHHHHHHHHHHhhc
Confidence 45567777776 5667777777777777777777666666
No 40
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=22.42 E-value=66 Score=25.66 Aligned_cols=45 Identities=11% Similarity=0.110 Sum_probs=36.0
Q ss_pred ceEeCCCCCCccHHHHHHHHHHHhHhcceEEEec-cCCChHHHHHHHHHHHH
Q 042145 45 PLIDLQVLDGPRRLDLIKQIGQACHHDGFFQVKN-HGIPETIINNTLSIAGA 95 (233)
Q Consensus 45 PvIDls~l~~~~~~~~~~~l~~A~~~~GFf~l~n-hgi~~~~~~~~~~~~~~ 95 (233)
-+|||+. ++.+....+.|.+.|.=.|.+ .|.+.+..+.+..++++
T Consensus 56 VvIDFT~------P~a~~~~~~~~~~~g~~~ViGTTG~~~~~~~~l~~~a~~ 101 (228)
T 1vm6_A 56 VVIDFSS------PEALPKTVDLCKKYRAGLVLGTTALKEEHLQMLRELSKE 101 (228)
T ss_dssp EEEECSC------GGGHHHHHHHHHHHTCEEEECCCSCCHHHHHHHHHHTTT
T ss_pred EEEECCC------HHHHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHHHhh
Confidence 5899996 567778888999999999986 48998887777776554
No 41
>2qt7_A Receptor-type tyrosine-protein phosphatase-like N; IA-2, ICA-512, protein-tyrosine phosphatase, transmembrane protein, diabetes, autoimmunity; 1.30A {Homo sapiens} PDB: 3n01_A 3np5_A 3ng8_A 3n4w_A
Probab=22.00 E-value=20 Score=24.35 Aligned_cols=33 Identities=15% Similarity=0.164 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHcCCChhHHHHH-hcCcCcceeE
Q 042145 170 LVLKLLEAISESMGLQRDYIDKA-LGKHGQQMAL 202 (233)
Q Consensus 170 l~~~ll~~i~~~Lgl~~~~~~~~-~~~~~~~lrl 202 (233)
=+..||+.+++.|+++..+|.+. ...+.-.+|+
T Consensus 18 eG~~l~~~la~ll~l~~~~Ft~i~V~g~aVTFrV 51 (91)
T 2qt7_A 18 AGVKLLEILAEHVHMSSGSFINISVVGPALTFRI 51 (91)
T ss_dssp HHHHHHHHHHHHHTSCGGGEEEEEEETTEEEEEE
T ss_pred HHHHHHHHHHHHhcCCccceeeeEeecceEEEEe
Confidence 37789999999999999988875 3445555666
No 42
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=21.43 E-value=1.7e+02 Score=23.66 Aligned_cols=44 Identities=16% Similarity=0.045 Sum_probs=33.5
Q ss_pred eEeCCCCCCccHHHHHHHHHHHhHhcceEEEe-ccCCChHHHHHHHHHHHH
Q 042145 46 LIDLQVLDGPRRLDLIKQIGQACHHDGFFQVK-NHGIPETIINNTLSIAGA 95 (233)
Q Consensus 46 vIDls~l~~~~~~~~~~~l~~A~~~~GFf~l~-nhgi~~~~~~~~~~~~~~ 95 (233)
+||++. .+....+.+.|.+.|.=.|. ..|.+.+..+++.+++++
T Consensus 77 VIDfT~------p~a~~~~~~~al~~G~~vVigTTG~s~~~~~~L~~aa~~ 121 (272)
T 4f3y_A 77 LIDFTL------PEGTLVHLDAALRHDVKLVIGTTGFSEPQKAQLRAAGEK 121 (272)
T ss_dssp EEECSC------HHHHHHHHHHHHHHTCEEEECCCCCCHHHHHHHHHHTTT
T ss_pred EEEcCC------HHHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHhcc
Confidence 778874 56667788888889987777 568988878777777653
No 43
>3m20_A 4-oxalocrotonate tautomerase, putative; DMPI, thermophIle, beta-alpha-beta, catalytic proline, isomerase; 2.37A {Archaeoglobus fulgidus}
Probab=21.26 E-value=88 Score=18.76 Aligned_cols=24 Identities=25% Similarity=0.344 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHHHHHHcCCChhH
Q 042145 165 TSVRGLVLKLLEAISESMGLQRDY 188 (233)
Q Consensus 165 ~~~~~l~~~ll~~i~~~Lgl~~~~ 188 (233)
++-.+|...|.+.+++.||++++.
T Consensus 13 eqK~~L~~~it~~~~~~lg~~~~~ 36 (62)
T 3m20_A 13 GKKREFVERLTSVAAEIYGMDRSA 36 (62)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCTTS
T ss_pred HHHHHHHHHHHHHHHHHhCcCcce
Confidence 345688889999999999998644
No 44
>2rdq_A 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II ketoglutarate dependent hydroxylase...; double stranded barrel helix, dioxygenase; HET: AKG; 1.31A {Streptomyces avermitilis} PDB: 2rdn_A* 2rdr_A* 2rds_A*
Probab=21.08 E-value=1e+02 Score=24.53 Aligned_cols=36 Identities=6% Similarity=0.173 Sum_probs=29.9
Q ss_pred HHHHHHhHhcceEEEeccCCChHHHHHHHHHHHHhhc
Q 042145 62 KQIGQACHHDGFFQVKNHGIPETIINNTLSIAGAFFK 98 (233)
Q Consensus 62 ~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~ 98 (233)
+++.+.+.+.||+.|.+- ++.+.++++.+...++++
T Consensus 22 ~~~~~~f~~dGyvvl~~~-l~~e~v~~l~~~~~~~~~ 57 (288)
T 2rdq_A 22 AALDSFYEEHGYLFLRNV-LDRDLVKTVAEQMREGLV 57 (288)
T ss_dssp HHHHHHHHHHSEEEECSC-SCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCEEEEeCC-CCHHHHHHHHHHHHHHHH
Confidence 457788999999999875 788999998888887753
No 45
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=20.86 E-value=81 Score=25.29 Aligned_cols=44 Identities=16% Similarity=0.076 Sum_probs=21.8
Q ss_pred HHHHHHHHcCCChhHHHHHhcCcCcceeEeeeCCCCCCCCcCCCCCccCC
Q 042145 174 LLEAISESMGLQRDYIDKALGKHGQQMALNYCPPCPQPDLTYGLPGHTDP 223 (233)
Q Consensus 174 ll~~i~~~Lgl~~~~~~~~~~~~~~~lrll~YPp~~~~~~~~g~~~HtD~ 223 (233)
|.+.|...|+..+.+..........-+++++|.+-. -..+|.|.
T Consensus 75 l~~~i~~~l~~~~~f~~~~L~~~~e~~~~~rY~~G~------~y~~H~D~ 118 (243)
T 3dkq_A 75 LGQQIMDRLLAHPQFVSAALPLQFYPPLFNRYQGGE------TFGYHIDN 118 (243)
T ss_dssp HHHHHHHHHHTCHHHHHHHCEEEEEEEEEEEECTTC------EEEEECBC
T ss_pred HHHHHHHHHccCcchhhcccccccccceEEEECCCC------eeccCCCC
Confidence 334444445554433222222223347899998642 14667765
Done!