Your job contains 1 sequence.
>042146
MSSDRSLESFRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDS
TPPSPLQKFTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTF
NETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFIL
VGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAK
NIIASGALDNDRTMKIWTQEKE
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 042146
(262 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 555 1.1e-53 1
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 444 6.6e-42 1
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 436 4.6e-41 1
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 431 1.6e-40 1
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 431 1.6e-40 1
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 431 1.6e-40 1
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 431 1.6e-40 1
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 431 1.6e-40 1
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 431 1.6e-40 1
UNIPROTKB|A8X8C6 - symbol:tag-125 "WD repeat-containing p... 414 9.9e-39 1
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 408 4.3e-38 1
TAIR|locus:2140215 - symbol:WDR5b "AT4G02730" species:370... 406 7.0e-38 1
WB|WBGene00006474 - symbol:wdr-5.1 species:6239 "Caenorha... 389 4.4e-36 1
UNIPROTKB|Q17963 - symbol:tag-125 "WD repeat-containing p... 389 4.4e-36 1
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 359 6.7e-33 1
UNIPROTKB|G4MKJ2 - symbol:MGG_04473 "WD repeat containing... 255 5.9e-30 2
POMBASE|SPBC354.03 - symbol:swd3 "WD repeat protein Swd3"... 296 3.2e-26 1
ASPGD|ASPL0000017294 - symbol:AN3926 species:162425 "Emer... 286 1.5e-24 1
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 265 1.8e-21 1
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 242 5.3e-20 1
ASPGD|ASPL0000006405 - symbol:AN6960 species:162425 "Emer... 249 1.4e-19 1
UNIPROTKB|Q0P593 - symbol:WDR69 "Outer row dynein assembl... 207 3.6e-19 2
ASPGD|ASPL0000038644 - symbol:AN10391 species:162425 "Eme... 230 2.5e-18 1
DICTYBASE|DDB_G0288375 - symbol:lis1 "lissencephaly-1 hom... 225 3.6e-18 1
UNIPROTKB|I3L2U8 - symbol:PAFAH1B1 "Platelet-activating f... 221 3.8e-18 1
CGD|CAL0005013 - symbol:SWD3 species:5476 "Candida albica... 222 5.4e-18 1
UNIPROTKB|Q9PTR5 - symbol:PAFAH1B1 "Lissencephaly-1 homol... 222 7.2e-18 1
UNIPROTKB|A5D7P3 - symbol:PAFAH1B1 "Platelet-activating f... 221 9.3e-18 1
UNIPROTKB|E2QY31 - symbol:PAFAH1B1 "Uncharacterized prote... 221 9.3e-18 1
UNIPROTKB|J9P388 - symbol:PAFAH1B1 "Uncharacterized prote... 221 9.3e-18 1
UNIPROTKB|P43034 - symbol:PAFAH1B1 "Platelet-activating f... 221 9.3e-18 1
UNIPROTKB|F2Z521 - symbol:PAFAH1B1 "Platelet-activating f... 221 9.3e-18 1
MGI|MGI:109520 - symbol:Pafah1b1 "platelet-activating fac... 221 9.3e-18 1
RGD|620331 - symbol:Pafah1b1 "platelet-activating factor ... 221 9.3e-18 1
UNIPROTKB|P63004 - symbol:Pafah1b1 "Platelet-activating f... 221 9.3e-18 1
UNIPROTKB|P43033 - symbol:PAFAH1B1 "Platelet-activating f... 221 9.3e-18 1
UNIPROTKB|Q9GL51 - symbol:PAFAH1B1 "Platelet-activating f... 218 2.0e-17 1
RGD|1561436 - symbol:LOC363267 "hypothetical protein LOC3... 218 2.1e-17 1
ZFIN|ZDB-GENE-040116-2 - symbol:pafah1b1a "platelet-activ... 215 4.3e-17 1
ZFIN|ZDB-GENE-040426-978 - symbol:snrnp40 "small nuclear ... 208 1.3e-16 1
ZFIN|ZDB-GENE-050419-255 - symbol:daw1 "dynein assembly f... 210 1.6e-16 1
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 208 2.7e-16 1
CGD|CAL0000165 - symbol:orf19.536 species:5476 "Candida a... 213 3.0e-16 1
ZFIN|ZDB-GENE-031118-54 - symbol:poc1b "POC1 centriolar p... 205 8.9e-16 1
ASPGD|ASPL0000015866 - symbol:AN8183 species:162425 "Emer... 148 1.0e-15 3
ZFIN|ZDB-GENE-040116-3 - symbol:pafah1b1b "platelet-activ... 202 1.2e-15 1
MGI|MGI:1917485 - symbol:Poc1a "POC1 centriolar protein h... 200 1.9e-15 1
WB|WBGene00004767 - symbol:sel-10 species:6239 "Caenorhab... 201 3.5e-15 1
UNIPROTKB|Q93794 - symbol:sel-10 "F-box/WD repeat-contain... 201 3.5e-15 1
ZFIN|ZDB-GENE-040426-1954 - symbol:katnb1 "katanin p80 (W... 202 3.7e-15 1
TAIR|locus:2179300 - symbol:TAF5 "AT5G25150" species:3702... 201 4.4e-15 1
DICTYBASE|DDB_G0295793 - symbol:DDB_G0295793 "WD40 repeat... 200 5.5e-15 1
UNIPROTKB|Q96DI7 - symbol:SNRNP40 "U5 small nuclear ribon... 193 7.4e-15 1
UNIPROTKB|F1MLP7 - symbol:SNRNP40 "U5 small nuclear ribon... 193 7.5e-15 1
UNIPROTKB|Q2HJH6 - symbol:SNRNP40 "U5 small nuclear ribon... 193 7.5e-15 1
UNIPROTKB|F1SVA6 - symbol:SNRNP40 "Uncharacterized protei... 193 7.5e-15 1
ASPGD|ASPL0000031743 - symbol:AN8505 species:162425 "Emer... 201 7.6e-15 1
UNIPROTKB|E2RGD1 - symbol:POC1A "Uncharacterized protein"... 194 8.8e-15 1
UNIPROTKB|G3V1X0 - symbol:POC1B "POC1 centriolar protein ... 180 9.3e-15 2
MGI|MGI:1913835 - symbol:Snrnp40 "small nuclear ribonucle... 192 9.7e-15 1
ZFIN|ZDB-GENE-040426-1993 - symbol:poc1a "POC1 centriolar... 173 1.1e-14 2
UNIPROTKB|Q8TC44 - symbol:POC1B "POC1 centriolar protein ... 180 1.4e-14 2
UNIPROTKB|Q2TBP4 - symbol:POC1A "POC1 centriolar protein ... 192 1.5e-14 1
RGD|1565004 - symbol:Poc1a "POC1 centriolar protein homol... 191 2.5e-14 1
SGD|S000000668 - symbol:RSA4 "WD-repeat protein involved ... 192 2.5e-14 1
UNIPROTKB|F1N9W1 - symbol:FBXW7 "Uncharacterized protein"... 192 3.3e-14 1
RGD|2321145 - symbol:Fbxw7 "F-box and WD repeat domain co... 192 3.3e-14 1
UNIPROTKB|F1MNN4 - symbol:FBXW7 "Uncharacterized protein"... 192 3.7e-14 1
MGI|MGI:1354695 - symbol:Fbxw7 "F-box and WD-40 domain pr... 192 3.7e-14 1
POMBASE|SPBC15D4.14 - symbol:taf73 "transcription factor ... 192 3.8e-14 1
SGD|S000000680 - symbol:TUP1 "General repressor of transc... 153 3.8e-14 2
UNIPROTKB|F1SIZ2 - symbol:POC1A "Uncharacterized protein"... 191 4.1e-14 1
UNIPROTKB|Q969H0 - symbol:FBXW7 "F-box/WD repeat-containi... 192 4.5e-14 1
UNIPROTKB|E2QUZ3 - symbol:FBXW7 "Uncharacterized protein"... 192 4.5e-14 1
UNIPROTKB|F1NUK8 - symbol:SNRNP40 "Uncharacterized protei... 191 4.8e-14 1
ZFIN|ZDB-GENE-090313-79 - symbol:fbxw7 "F-box and WD repe... 192 5.0e-14 1
ZFIN|ZDB-GENE-051120-180 - symbol:taf5 "TAF5 RNA polymera... 181 5.0e-14 2
SGD|S000001308 - symbol:MET30 "F-box protein containing f... 162 5.4e-14 2
UNIPROTKB|B4DQJ1 - symbol:SNRNP40 "U5 small nuclear ribon... 191 5.7e-14 1
UNIPROTKB|A5PKH9 - symbol:WDR51B "Uncharacterized protein... 176 6.0e-14 2
RGD|2323942 - symbol:Poc1b "POC1 centriolar protein homol... 189 7.2e-14 2
UNIPROTKB|Q5RD06 - symbol:POC1B "POC1 centriolar protein ... 181 7.3e-14 2
CGD|CAL0005939 - symbol:TUP1 species:5476 "Candida albica... 183 1.3e-13 2
UNIPROTKB|P0CY34 - symbol:TUP1 "Transcriptional repressor... 183 1.3e-13 2
CGD|CAL0004039 - symbol:orf19.3301 species:5476 "Candida ... 156 1.7e-13 2
ZFIN|ZDB-GENE-040426-1851 - symbol:wdr61 "WD repeat domai... 186 2.0e-13 1
FB|FBgn0027524 - symbol:CG3909 species:7227 "Drosophila m... 153 2.9e-13 2
TAIR|locus:2060560 - symbol:LIS "AT2G41500" species:3702 ... 186 3.4e-13 2
UNIPROTKB|E9PFC6 - symbol:POC1A "POC1 centriolar protein ... 186 4.5e-13 1
SGD|S000000402 - symbol:TAF5 "Subunit (90 kDa) of TFIID a... 189 5.6e-13 1
MGI|MGI:1918511 - symbol:Poc1b "POC1 centriolar protein h... 177 5.8e-13 2
UNIPROTKB|Q8NBT0 - symbol:POC1A "POC1 centriolar protein ... 186 6.0e-13 1
POMBASE|SPCC18.05c - symbol:SPCC18.05c "notchless-like pr... 187 6.7e-13 1
RGD|1311332 - symbol:Taf5 "TAF5 RNA polymerase II, TATA b... 175 1.1e-12 2
UNIPROTKB|Q15542 - symbol:TAF5 "Transcription initiation ... 175 1.1e-12 2
UNIPROTKB|F1NUJ8 - symbol:POC1A "Uncharacterized protein"... 182 1.3e-12 1
UNIPROTKB|F1NII4 - symbol:NLE1 "Uncharacterized protein" ... 167 1.5e-12 2
UNIPROTKB|G4MQX3 - symbol:MGG_04719 "Guanine nucleotide-b... 171 1.5e-12 2
FB|FBgn0010356 - symbol:Taf5 "TBP-associated factor 5" sp... 186 1.8e-12 1
UNIPROTKB|G4N183 - symbol:MGG_07465 "Periodic tryptophan ... 158 2.4e-12 2
WARNING: Descriptions of 865 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 555 (200.4 bits), Expect = 1.1e-53, P = 1.1e-53
Identities = 111/181 (61%), Positives = 138/181 (76%)
Query: 9 SFRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTP-PSPLQ 67
SF PY +QTL H RAVS VKFS DGRLL S+SA+KT+ TY++++I++ P P+Q
Sbjct: 10 SFTPYVHSQTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTIND----PIAEPVQ 65
Query: 68 KFTGHEQGISDLA---------------TIRLWDVPTATSLKTLIGHTNYVFCINFNPQS 112
+FTGHE GISD+A T++LWDV T + +KTLIGHTNY FC+NFNPQS
Sbjct: 66 EFTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQS 125
Query: 113 NRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDAS 172
N IVS +F+ET+RIWD+ TGKCLKVLPAHSDPVTA+DFNRDG++IV+SSYDGL RI D+
Sbjct: 126 NMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSG 185
Query: 173 T 173
T
Sbjct: 186 T 186
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 78/260 (30%), Positives = 134/260 (51%)
Query: 17 QTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGHEQGI 76
Q GH +S V FS D R + S+S +KTL + + + S + F +
Sbjct: 65 QEFTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQ 124
Query: 77 SDLA-------TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDI 129
S++ T+R+WDV T LK L H++ V ++FN + IVS +++ RIWD
Sbjct: 125 SNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDS 184
Query: 130 KTGKCLKVL-PAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFI--LVGTLDN 186
TG C+K L + PV+ + F+ +G I+ + D R+ + S+ KF+ G ++
Sbjct: 185 GTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISS--AKFLKTYTGHVNA 242
Query: 187 TLRLWN-YSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVS---HRDPVISVASHPAKNI 242
+ + +S + SG ++ C+ + + + K + H + V++VA HP +N+
Sbjct: 243 QYCISSAFSVTNGKRIVSGSEDN--CVHM-WELNSKKLLQKLEGHTETVMNVACHPTENL 299
Query: 243 IASGALDNDRTMKIWTQEKE 262
IASG+LD +T++IWTQ+KE
Sbjct: 300 IASGSLD--KTVRIWTQKKE 317
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 444 (161.4 bits), Expect = 6.6e-42, P = 6.6e-42
Identities = 96/188 (51%), Positives = 128/188 (68%)
Query: 2 SSDRSLESFRP-YTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDS 60
+S++S S +P YTL TL GH +AVS VKFS +G L SSSA+K + + F+
Sbjct: 50 ASNKSSLSVKPNYTLKFTLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYD-GKFEK 108
Query: 61 TPPSPLQKFTGHEQGISDLA---------------TIRLWDVPTATSLKTLIGHTNYVFC 105
T +GH+ GISD+A T+++W++ T SLKTL GH+NYVFC
Sbjct: 109 T-------ISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFC 161
Query: 106 INFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGL 165
NFNPQSN IVS +F+E++RIWD++TGKCLK LPAHSDPV+A+ FNRDG++IV+SSYDGL
Sbjct: 162 CNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGL 221
Query: 166 YRILDAST 173
RI D ++
Sbjct: 222 CRIWDTAS 229
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 83/272 (30%), Positives = 140/272 (51%)
Query: 2 SSDRSLESFRPYT--LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFD 59
S+D+ ++ + Y +T++GH +S V +S D RLL S S +KTL + LS+ +
Sbjct: 91 SADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLK 150
Query: 60 STPPSPLQKFTGHEQGISDLA-------TIRLWDVPTATSLKTLIGHTNYVFCINFNPQS 112
+ F + S+L ++R+WDV T LKTL H++ V ++FN
Sbjct: 151 TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDG 210
Query: 113 NRIVSDTFNETIRIWDIKTGKCLKVL-PAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDA 171
+ IVS +++ RIWD +G+CLK L + PV+ + F+ +G I+ ++ D ++ D
Sbjct: 211 SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDY 270
Query: 172 STPNGKFI--LVGTLDNTLRLW-NYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHR 228
S GK + G + ++ N+S SG ++ I + S + + H
Sbjct: 271 S--KGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQGHT 328
Query: 229 DPVISVASHPAKNIIASGALDNDRTMKIWTQE 260
D V+ A HP +NIIAS AL+ND+T+K+W +
Sbjct: 329 DTVLCTACHPTENIIASAALENDKTIKLWKSD 360
Score = 172 (65.6 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 70/247 (28%), Positives = 111/247 (44%)
Query: 37 LLTSSSAEKTLLTYSLSSISNFDS--TPPSPLQKFT--GHEQGISD---------LAT-- 81
L +S + T S SS SN S P+ KFT GH + +S LA+
Sbjct: 32 LQPNSVGQPGATTSSNSSASNKSSLSVKPNYTLKFTLAGHTKAVSAVKFSPNGEWLASSS 91
Query: 82 ----IRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKV 137
I++W KT+ GH + + ++ S +VS + ++T+++W++ TGK LK
Sbjct: 92 ADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKT 151
Query: 138 LPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFI-LVGTLDNTLRLWNYSTR 196
L HS+ V +FN +IV+ S+D RI D T GK + + + + +++
Sbjct: 152 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT--GKCLKTLPAHSDPVSAVHFNRD 209
Query: 197 KILKTYSGYTNSKYC-ISSTFSVTNGKYIVSHRDPVIS-VASHPAKNIIASGALDNDRTM 254
L S Y C I T S K ++ +P +S V P I + LDN T+
Sbjct: 210 GSLIVSSSYDG--LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN--TL 265
Query: 255 KIWTQEK 261
K+W K
Sbjct: 266 KLWDYSK 272
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 436 (158.5 bits), Expect = 4.6e-41, P = 4.6e-41
Identities = 93/176 (52%), Positives = 119/176 (67%)
Query: 13 YTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGH 72
YTL TL GH +AVS VKFS +G L SSSA+K + + F+ T +GH
Sbjct: 35 YTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-GKFEKT-------ISGH 86
Query: 73 EQGISDLA---------------TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVS 117
+ GISD+A T+++WDV + LKTL GH+NYVFC NFNPQSN IVS
Sbjct: 87 KLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVS 146
Query: 118 DTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDAST 173
+F+E++RIWD+KTGKCLK LPAHSDPV+A+ FNRDG++IV+SSYDGL RI D ++
Sbjct: 147 GSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 202
Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
Identities = 83/272 (30%), Positives = 138/272 (50%)
Query: 2 SSDRSLESFRPYT--LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFD 59
S+D+ ++ + Y +T++GH +S V +S D LL S+S +KTL + +SS
Sbjct: 64 SADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLK 123
Query: 60 STPPSPLQKFTGHEQGISDLA-------TIRLWDVPTATSLKTLIGHTNYVFCINFNPQS 112
+ F + S+L ++R+WDV T LKTL H++ V ++FN
Sbjct: 124 TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDG 183
Query: 113 NRIVSDTFNETIRIWDIKTGKCLKVL-PAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDA 171
+ IVS +++ RIWD +G+CLK L + PV+ + F+ +G I+ ++ D ++ D
Sbjct: 184 SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDY 243
Query: 172 STPNGKFILVGTLDNTLRLW---NYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHR 228
S GK + T + N+S SG ++ I + + + + H
Sbjct: 244 S--KGKCLKTYTCHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEVVQKLQGHT 301
Query: 229 DPVISVASHPAKNIIASGALDNDRTMKIWTQE 260
D VIS A HP +NIIAS AL+ND+T+K+W +
Sbjct: 302 DVVISTACHPTENIIASAALENDKTIKLWKSD 333
Score = 188 (71.2 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 55/183 (30%), Positives = 89/183 (48%)
Query: 82 IRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAH 141
I++W KT+ GH + + ++ SN +VS + ++T++IWD+ +GKCLK L H
Sbjct: 69 IKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGH 128
Query: 142 SDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFI-LVGTLDNTLRLWNYSTRKILK 200
S+ V +FN +IV+ S+D RI D T GK + + + + +++ L
Sbjct: 129 SNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT--GKCLKTLPAHSDPVSAVHFNRDGSLI 186
Query: 201 TYSGYTNSKYC-ISSTFSVTNGKYIVSHRDPVIS-VASHPAKNIIASGALDNDRTMKIWT 258
S Y C I T S K ++ +P +S V P I + LDN T+K+W
Sbjct: 187 VSSSYDG--LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN--TLKLWD 242
Query: 259 QEK 261
K
Sbjct: 243 YSK 245
Score = 136 (52.9 bits), Expect = 9.8e-07, P = 9.8e-07
Identities = 44/170 (25%), Positives = 77/170 (45%)
Query: 88 PTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTA 147
P T TL GHT V + F+P + S + ++ I+IW GK K + H ++
Sbjct: 33 PNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISD 92
Query: 148 IDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTN 207
+ ++ D ++V++S D +I D S+ L G N + N++ + L SG +
Sbjct: 93 VAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGH-SNYVFCCNFNPQSNL-IVSGSFD 150
Query: 208 SKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDNDRTMKIW 257
I + K + +H DPV +V + ++I S + D +IW
Sbjct: 151 ESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG--LCRIW 198
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 431 (156.8 bits), Expect = 1.6e-40, P = 1.6e-40
Identities = 92/176 (52%), Positives = 118/176 (67%)
Query: 13 YTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGH 72
Y L TL GH +AVS VKFS +G L SSSA+K + + F+ T +GH
Sbjct: 9 YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-GKFEKT-------ISGH 60
Query: 73 EQGISDLA---------------TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVS 117
+ GISD+A T+++WDV + LKTL GH+NYVFC NFNPQSN IVS
Sbjct: 61 KLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVS 120
Query: 118 DTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDAST 173
+F+E++RIWD+KTGKCLK LPAHSDPV+A+ FNRDG++IV+SSYDGL RI D ++
Sbjct: 121 GSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 176
Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 83/272 (30%), Positives = 140/272 (51%)
Query: 2 SSDRSLESFRPYT--LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFD 59
S+D+ ++ + Y +T++GH +S V +S D LL S+S +KTL + +SS
Sbjct: 38 SADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLK 97
Query: 60 STPPSPLQKFTGHEQGISDLA-------TIRLWDVPTATSLKTLIGHTNYVFCINFNPQS 112
+ F + S+L ++R+WDV T LKTL H++ V ++FN
Sbjct: 98 TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDG 157
Query: 113 NRIVSDTFNETIRIWDIKTGKCLKVL-PAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDA 171
+ IVS +++ RIWD +G+CLK L + PV+ + F+ +G I+ ++ D ++ D
Sbjct: 158 SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDY 217
Query: 172 STPNGKFI--LVGTLDNTLRLW-NYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHR 228
S GK + G + ++ N+S SG ++ I + + + + H
Sbjct: 218 S--KGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHT 275
Query: 229 DPVISVASHPAKNIIASGALDNDRTMKIWTQE 260
D VIS A HP +NIIAS AL+ND+T+K+W +
Sbjct: 276 DVVISTACHPTENIIASAALENDKTIKLWKSD 307
Score = 188 (71.2 bits), Expect = 9.8e-14, P = 9.8e-14
Identities = 55/183 (30%), Positives = 89/183 (48%)
Query: 82 IRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAH 141
I++W KT+ GH + + ++ SN +VS + ++T++IWD+ +GKCLK L H
Sbjct: 43 IKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGH 102
Query: 142 SDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFI-LVGTLDNTLRLWNYSTRKILK 200
S+ V +FN +IV+ S+D RI D T GK + + + + +++ L
Sbjct: 103 SNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT--GKCLKTLPAHSDPVSAVHFNRDGSLI 160
Query: 201 TYSGYTNSKYC-ISSTFSVTNGKYIVSHRDPVIS-VASHPAKNIIASGALDNDRTMKIWT 258
S Y C I T S K ++ +P +S V P I + LDN T+K+W
Sbjct: 161 VSSSYDG--LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN--TLKLWD 216
Query: 259 QEK 261
K
Sbjct: 217 YSK 219
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 431 (156.8 bits), Expect = 1.6e-40, P = 1.6e-40
Identities = 92/176 (52%), Positives = 118/176 (67%)
Query: 13 YTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGH 72
Y L TL GH +AVS VKFS +G L SSSA+K + + F+ T +GH
Sbjct: 35 YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-GKFEKT-------ISGH 86
Query: 73 EQGISDLA---------------TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVS 117
+ GISD+A T+++WDV + LKTL GH+NYVFC NFNPQSN IVS
Sbjct: 87 KLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVS 146
Query: 118 DTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDAST 173
+F+E++RIWD+KTGKCLK LPAHSDPV+A+ FNRDG++IV+SSYDGL RI D ++
Sbjct: 147 GSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 202
Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 83/272 (30%), Positives = 140/272 (51%)
Query: 2 SSDRSLESFRPYT--LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFD 59
S+D+ ++ + Y +T++GH +S V +S D LL S+S +KTL + +SS
Sbjct: 64 SADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLK 123
Query: 60 STPPSPLQKFTGHEQGISDLA-------TIRLWDVPTATSLKTLIGHTNYVFCINFNPQS 112
+ F + S+L ++R+WDV T LKTL H++ V ++FN
Sbjct: 124 TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDG 183
Query: 113 NRIVSDTFNETIRIWDIKTGKCLKVL-PAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDA 171
+ IVS +++ RIWD +G+CLK L + PV+ + F+ +G I+ ++ D ++ D
Sbjct: 184 SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDY 243
Query: 172 STPNGKFI--LVGTLDNTLRLW-NYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHR 228
S GK + G + ++ N+S SG ++ I + + + + H
Sbjct: 244 S--KGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHT 301
Query: 229 DPVISVASHPAKNIIASGALDNDRTMKIWTQE 260
D VIS A HP +NIIAS AL+ND+T+K+W +
Sbjct: 302 DVVISTACHPTENIIASAALENDKTIKLWKSD 333
Score = 188 (71.2 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 55/183 (30%), Positives = 89/183 (48%)
Query: 82 IRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAH 141
I++W KT+ GH + + ++ SN +VS + ++T++IWD+ +GKCLK L H
Sbjct: 69 IKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGH 128
Query: 142 SDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFI-LVGTLDNTLRLWNYSTRKILK 200
S+ V +FN +IV+ S+D RI D T GK + + + + +++ L
Sbjct: 129 SNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT--GKCLKTLPAHSDPVSAVHFNRDGSLI 186
Query: 201 TYSGYTNSKYC-ISSTFSVTNGKYIVSHRDPVIS-VASHPAKNIIASGALDNDRTMKIWT 258
S Y C I T S K ++ +P +S V P I + LDN T+K+W
Sbjct: 187 VSSSYDG--LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN--TLKLWD 242
Query: 259 QEK 261
K
Sbjct: 243 YSK 245
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 431 (156.8 bits), Expect = 1.6e-40, P = 1.6e-40
Identities = 92/176 (52%), Positives = 118/176 (67%)
Query: 13 YTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGH 72
Y L TL GH +AVS VKFS +G L SSSA+K + + F+ T +GH
Sbjct: 35 YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-GKFEKT-------ISGH 86
Query: 73 EQGISDLA---------------TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVS 117
+ GISD+A T+++WDV + LKTL GH+NYVFC NFNPQSN IVS
Sbjct: 87 KLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVS 146
Query: 118 DTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDAST 173
+F+E++RIWD+KTGKCLK LPAHSDPV+A+ FNRDG++IV+SSYDGL RI D ++
Sbjct: 147 GSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 202
Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 83/272 (30%), Positives = 140/272 (51%)
Query: 2 SSDRSLESFRPYT--LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFD 59
S+D+ ++ + Y +T++GH +S V +S D LL S+S +KTL + +SS
Sbjct: 64 SADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLK 123
Query: 60 STPPSPLQKFTGHEQGISDLA-------TIRLWDVPTATSLKTLIGHTNYVFCINFNPQS 112
+ F + S+L ++R+WDV T LKTL H++ V ++FN
Sbjct: 124 TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDG 183
Query: 113 NRIVSDTFNETIRIWDIKTGKCLKVL-PAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDA 171
+ IVS +++ RIWD +G+CLK L + PV+ + F+ +G I+ ++ D ++ D
Sbjct: 184 SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDY 243
Query: 172 STPNGKFI--LVGTLDNTLRLW-NYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHR 228
S GK + G + ++ N+S SG ++ I + + + + H
Sbjct: 244 S--KGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHT 301
Query: 229 DPVISVASHPAKNIIASGALDNDRTMKIWTQE 260
D VIS A HP +NIIAS AL+ND+T+K+W +
Sbjct: 302 DVVISTACHPTENIIASAALENDKTIKLWKSD 333
Score = 188 (71.2 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 55/183 (30%), Positives = 89/183 (48%)
Query: 82 IRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAH 141
I++W KT+ GH + + ++ SN +VS + ++T++IWD+ +GKCLK L H
Sbjct: 69 IKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGH 128
Query: 142 SDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFI-LVGTLDNTLRLWNYSTRKILK 200
S+ V +FN +IV+ S+D RI D T GK + + + + +++ L
Sbjct: 129 SNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT--GKCLKTLPAHSDPVSAVHFNRDGSLI 186
Query: 201 TYSGYTNSKYC-ISSTFSVTNGKYIVSHRDPVIS-VASHPAKNIIASGALDNDRTMKIWT 258
S Y C I T S K ++ +P +S V P I + LDN T+K+W
Sbjct: 187 VSSSYDG--LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN--TLKLWD 242
Query: 259 QEK 261
K
Sbjct: 243 YSK 245
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 431 (156.8 bits), Expect = 1.6e-40, P = 1.6e-40
Identities = 92/176 (52%), Positives = 118/176 (67%)
Query: 13 YTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGH 72
Y L TL GH +AVS VKFS +G L SSSA+K + + F+ T +GH
Sbjct: 35 YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-GKFEKT-------ISGH 86
Query: 73 EQGISDLA---------------TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVS 117
+ GISD+A T+++WDV + LKTL GH+NYVFC NFNPQSN IVS
Sbjct: 87 KLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVS 146
Query: 118 DTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDAST 173
+F+E++RIWD+KTGKCLK LPAHSDPV+A+ FNRDG++IV+SSYDGL RI D ++
Sbjct: 147 GSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 202
Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 83/272 (30%), Positives = 140/272 (51%)
Query: 2 SSDRSLESFRPYT--LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFD 59
S+D+ ++ + Y +T++GH +S V +S D LL S+S +KTL + +SS
Sbjct: 64 SADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLK 123
Query: 60 STPPSPLQKFTGHEQGISDLA-------TIRLWDVPTATSLKTLIGHTNYVFCINFNPQS 112
+ F + S+L ++R+WDV T LKTL H++ V ++FN
Sbjct: 124 TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDG 183
Query: 113 NRIVSDTFNETIRIWDIKTGKCLKVL-PAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDA 171
+ IVS +++ RIWD +G+CLK L + PV+ + F+ +G I+ ++ D ++ D
Sbjct: 184 SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDY 243
Query: 172 STPNGKFI--LVGTLDNTLRLW-NYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHR 228
S GK + G + ++ N+S SG ++ I + + + + H
Sbjct: 244 S--KGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHT 301
Query: 229 DPVISVASHPAKNIIASGALDNDRTMKIWTQE 260
D VIS A HP +NIIAS AL+ND+T+K+W +
Sbjct: 302 DVVISTACHPTENIIASAALENDKTIKLWKSD 333
Score = 188 (71.2 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 55/183 (30%), Positives = 89/183 (48%)
Query: 82 IRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAH 141
I++W KT+ GH + + ++ SN +VS + ++T++IWD+ +GKCLK L H
Sbjct: 69 IKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGH 128
Query: 142 SDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFI-LVGTLDNTLRLWNYSTRKILK 200
S+ V +FN +IV+ S+D RI D T GK + + + + +++ L
Sbjct: 129 SNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT--GKCLKTLPAHSDPVSAVHFNRDGSLI 186
Query: 201 TYSGYTNSKYC-ISSTFSVTNGKYIVSHRDPVIS-VASHPAKNIIASGALDNDRTMKIWT 258
S Y C I T S K ++ +P +S V P I + LDN T+K+W
Sbjct: 187 VSSSYDG--LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN--TLKLWD 242
Query: 259 QEK 261
K
Sbjct: 243 YSK 245
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 431 (156.8 bits), Expect = 1.6e-40, P = 1.6e-40
Identities = 92/176 (52%), Positives = 118/176 (67%)
Query: 13 YTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGH 72
Y L TL GH +AVS VKFS +G L SSSA+K + + F+ T +GH
Sbjct: 35 YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-GKFEKT-------ISGH 86
Query: 73 EQGISDLA---------------TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVS 117
+ GISD+A T+++WDV + LKTL GH+NYVFC NFNPQSN IVS
Sbjct: 87 KLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVS 146
Query: 118 DTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDAST 173
+F+E++RIWD+KTGKCLK LPAHSDPV+A+ FNRDG++IV+SSYDGL RI D ++
Sbjct: 147 GSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 202
Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 83/272 (30%), Positives = 140/272 (51%)
Query: 2 SSDRSLESFRPYT--LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFD 59
S+D+ ++ + Y +T++GH +S V +S D LL S+S +KTL + +SS
Sbjct: 64 SADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLK 123
Query: 60 STPPSPLQKFTGHEQGISDLA-------TIRLWDVPTATSLKTLIGHTNYVFCINFNPQS 112
+ F + S+L ++R+WDV T LKTL H++ V ++FN
Sbjct: 124 TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDG 183
Query: 113 NRIVSDTFNETIRIWDIKTGKCLKVL-PAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDA 171
+ IVS +++ RIWD +G+CLK L + PV+ + F+ +G I+ ++ D ++ D
Sbjct: 184 SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDY 243
Query: 172 STPNGKFI--LVGTLDNTLRLW-NYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHR 228
S GK + G + ++ N+S SG ++ I + + + + H
Sbjct: 244 S--KGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHT 301
Query: 229 DPVISVASHPAKNIIASGALDNDRTMKIWTQE 260
D VIS A HP +NIIAS AL+ND+T+K+W +
Sbjct: 302 DVVISTACHPTENIIASAALENDKTIKLWKSD 333
Score = 188 (71.2 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 55/183 (30%), Positives = 89/183 (48%)
Query: 82 IRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAH 141
I++W KT+ GH + + ++ SN +VS + ++T++IWD+ +GKCLK L H
Sbjct: 69 IKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGH 128
Query: 142 SDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFI-LVGTLDNTLRLWNYSTRKILK 200
S+ V +FN +IV+ S+D RI D T GK + + + + +++ L
Sbjct: 129 SNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT--GKCLKTLPAHSDPVSAVHFNRDGSLI 186
Query: 201 TYSGYTNSKYC-ISSTFSVTNGKYIVSHRDPVIS-VASHPAKNIIASGALDNDRTMKIWT 258
S Y C I T S K ++ +P +S V P I + LDN T+K+W
Sbjct: 187 VSSSYDG--LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN--TLKLWD 242
Query: 259 QEK 261
K
Sbjct: 243 YSK 245
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 431 (156.8 bits), Expect = 1.6e-40, P = 1.6e-40
Identities = 92/176 (52%), Positives = 118/176 (67%)
Query: 13 YTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGH 72
Y L TL GH +AVS VKFS +G L SSSA+K + + F+ T +GH
Sbjct: 35 YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-GKFEKT-------ISGH 86
Query: 73 EQGISDLA---------------TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVS 117
+ GISD+A T+++WDV + LKTL GH+NYVFC NFNPQSN IVS
Sbjct: 87 KLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVS 146
Query: 118 DTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDAST 173
+F+E++RIWD+KTGKCLK LPAHSDPV+A+ FNRDG++IV+SSYDGL RI D ++
Sbjct: 147 GSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 202
Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 83/272 (30%), Positives = 140/272 (51%)
Query: 2 SSDRSLESFRPYT--LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFD 59
S+D+ ++ + Y +T++GH +S V +S D LL S+S +KTL + +SS
Sbjct: 64 SADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLK 123
Query: 60 STPPSPLQKFTGHEQGISDLA-------TIRLWDVPTATSLKTLIGHTNYVFCINFNPQS 112
+ F + S+L ++R+WDV T LKTL H++ V ++FN
Sbjct: 124 TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDG 183
Query: 113 NRIVSDTFNETIRIWDIKTGKCLKVL-PAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDA 171
+ IVS +++ RIWD +G+CLK L + PV+ + F+ +G I+ ++ D ++ D
Sbjct: 184 SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDY 243
Query: 172 STPNGKFI--LVGTLDNTLRLW-NYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHR 228
S GK + G + ++ N+S SG ++ I + + + + H
Sbjct: 244 S--KGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHT 301
Query: 229 DPVISVASHPAKNIIASGALDNDRTMKIWTQE 260
D VIS A HP +NIIAS AL+ND+T+K+W +
Sbjct: 302 DVVISTACHPTENIIASAALENDKTIKLWKSD 333
Score = 188 (71.2 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 55/183 (30%), Positives = 89/183 (48%)
Query: 82 IRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAH 141
I++W KT+ GH + + ++ SN +VS + ++T++IWD+ +GKCLK L H
Sbjct: 69 IKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGH 128
Query: 142 SDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFI-LVGTLDNTLRLWNYSTRKILK 200
S+ V +FN +IV+ S+D RI D T GK + + + + +++ L
Sbjct: 129 SNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT--GKCLKTLPAHSDPVSAVHFNRDGSLI 186
Query: 201 TYSGYTNSKYC-ISSTFSVTNGKYIVSHRDPVIS-VASHPAKNIIASGALDNDRTMKIWT 258
S Y C I T S K ++ +P +S V P I + LDN T+K+W
Sbjct: 187 VSSSYDG--LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN--TLKLWD 242
Query: 259 QEK 261
K
Sbjct: 243 YSK 245
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 414 (150.8 bits), Expect = 9.9e-39, P = 9.9e-39
Identities = 85/182 (46%), Positives = 122/182 (67%)
Query: 13 YTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGH 72
Y L T+ GH +++S VKFS G+ L +SSA+KT+ +++S +S + T TGH
Sbjct: 69 YKLISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLS-CERT-------LTGH 120
Query: 73 EQGISDLA---------------TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVS 117
+ G++D A T+++++VPT KTL GHTNYVFC NFNPQS+ +VS
Sbjct: 121 KLGVNDFAWSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVS 180
Query: 118 DTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGK 177
+F+E++RIWD++TG C+K LPAHSDPV+A+ FNRDG++I + SYDGL RI D T NG+
Sbjct: 181 GSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWD--TANGQ 238
Query: 178 FI 179
+
Sbjct: 239 CV 240
Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 73/272 (26%), Positives = 135/272 (49%)
Query: 2 SSDRSLESFRPYTLT--QTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFD 59
S+D++++ + L+ +TL GH V+ +S D + + ++S +KTL Y + ++
Sbjct: 98 SADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSADSKSIVTASDDKTLKIYEVPTVKMAK 157
Query: 60 STPPSPLQKFTGHEQGISDLA-------TIRLWDVPTATSLKTLIGHTNYVFCINFNPQS 112
+ F + S L ++R+WDV T +KTL H++ V ++FN
Sbjct: 158 TLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDG 217
Query: 113 NRIVSDTFNETIRIWDIKTGKCLKVL-PAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDA 171
+ I S +++ +RIWD G+C+K L + PV + F+ +G I++S+ D ++ D
Sbjct: 218 SLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWDF 277
Query: 172 STPNGKFI--LVGTLDNTLRLW-NYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHR 228
GK + G +N ++ N+S SG + K + + + + + H
Sbjct: 278 G--KGKTLKQYQGHENNKYCIFANFSVTGGKWIISGSEDCKIYVWNLQTKEVVQSLEGHT 335
Query: 229 DPVISVASHPAKNIIASGALDNDRTMKIWTQE 260
VI+ HP +N+IASGAL+ D T++IW +
Sbjct: 336 QAVIASDCHPMQNMIASGALEPDNTIRIWRSD 367
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 408 (148.7 bits), Expect = 4.3e-38, P = 4.3e-38
Identities = 97/238 (40%), Positives = 136/238 (57%)
Query: 13 YTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGH 72
Y L TL GHL+++S VKFS DG+ L S+SA+KT+ + F+ T GH
Sbjct: 36 YILKYTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYD-GKFERT-------LEGH 87
Query: 73 EQGISDLA---------------TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVS 117
++GISD+A TI++WDV + +KTL GH YVF ++FNPQSN IVS
Sbjct: 88 KEGISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVS 147
Query: 118 DTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDA------ 171
+F+E +RIWD+ TG+C K++ AHSDPVT + FNRDGT++V+ SYDG RI D
Sbjct: 148 GSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLL 207
Query: 172 ---STPNGKFI-LVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIV 225
ST +GK + V N + + L+ +S Y N+K C+ + N KY +
Sbjct: 208 NTISTEDGKEVSFVKFSPNGKFVLAGTLDNTLRLWS-YNNNKKCLKTYTGHKNEKYCI 264
Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 71/269 (26%), Positives = 130/269 (48%)
Query: 2 SSDRSLESFRPYT--LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFD 59
S+D++++ + Y +TL GH +S + +S D +L+ S+S +KT+ + + S
Sbjct: 65 SADKTIKIWGAYDGKFERTLEGHKEGISDIAWSQDSKLICSASDDKTIKIWDVESGKMVK 124
Query: 60 STPPSPLQKFTGHEQGISDLAT-------IRLWDVPTATSLKTLIGHTNYVFCINFNPQS 112
+ F S+L +R+WDV T K + H++ V ++FN
Sbjct: 125 TLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDG 184
Query: 113 NRIVSDTFNETIRIWDIKTGKCLKVLPAHSDP-VTAIDFNRDGTMIVTSSYDGLYRILDA 171
+VS +++ T+RIWD TG+ L + V+ + F+ +G ++ + D R+
Sbjct: 185 TLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEVSFVKFSPNGKFVLAGTLDNTLRLWSY 244
Query: 172 STPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYI---VSHR 228
+ N K + T + +ST + T S+ + +++ + + H
Sbjct: 245 NN-NKKCLKTYTGHKNEKYCIFSTFSVTCGKWIVTGSEDNLIYIYNLQTREIVQTLAGHE 303
Query: 229 DPVISVASHPAKNIIASGALDNDRTMKIW 257
D V++VA HP +NIIASGAL+ DR++KIW
Sbjct: 304 DVVLTVACHPTENIIASGALEKDRSVKIW 332
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 406 (148.0 bits), Expect = 7.0e-38, P = 7.0e-38
Identities = 83/178 (46%), Positives = 121/178 (67%)
Query: 10 FRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKF 69
++PY +TL GH A+S VKFS+DG LL S+S +KT++ +S + N+ S + ++
Sbjct: 30 YKPYRHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSAT---NY-----SLIHRY 81
Query: 70 TGHEQGISDLA---------------TIRLWDVPTATS-LKTLIGHTNYVFCINFNPQSN 113
GH GISDLA T+R+WD + LK L GHTN+VFC+NFNP SN
Sbjct: 82 EGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSN 141
Query: 114 RIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDA 171
IVS +F+ETIRIW++KTGKC++++ AHS P++++ FNRDG++IV++S+DG +I DA
Sbjct: 142 LIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDA 199
Score = 218 (81.8 bits), Expect = 6.5e-18, P = 6.5e-18
Identities = 78/273 (28%), Positives = 128/273 (46%)
Query: 13 YTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYS----------LSSISNF---- 58
Y+L GH +S + +S D S+S + TL + L +NF
Sbjct: 75 YSLIHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCV 134
Query: 59 DSTPPSPLQKFTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSD 118
+ PPS L G D TIR+W+V T ++ + H+ + ++FN + IVS
Sbjct: 135 NFNPPSNLIV-----SGSFD-ETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSA 188
Query: 119 TFNETIRIWDIKTGKCLKVLPAHSDP-VTAIDFNRDGTMIVTSSYDGLYRILDASTPNGK 177
+ + + +IWD K G CLK L P V+ F+ +G I+ ++ D ++ + +T GK
Sbjct: 189 SHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYAT--GK 246
Query: 178 FILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISST---------FSVTNG-KYIVSH 227
F+ V T +T +++ I +S TN KY +S + N + + H
Sbjct: 247 FLKVYT-GHTNKVFC-----ITSAFS-VTNGKYIVSGSEDNCVYLWDLQARNILQRLEGH 299
Query: 228 RDPVISVASHPAKNIIASGALDNDRTMKIWTQE 260
D VISV+ HP +N I+S D+T++IW Q+
Sbjct: 300 TDAVISVSCHPVQNEISSSGNHLDKTIRIWKQD 332
Score = 119 (46.9 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 43/168 (25%), Positives = 76/168 (45%)
Query: 93 LKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNR 152
LKTL GHT + C+ F+ N + S + ++T+ +W + HS ++ + ++
Sbjct: 36 LKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSS 95
Query: 153 DGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCI 212
D ++S D RI DA +P ++ N + N++ L SG + I
Sbjct: 96 DSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNL-IVSGSFDETIRI 154
Query: 213 SSTFSVTNGK---YIVSHRDPVISVASHPAKNIIASGALDNDRTMKIW 257
+ V GK I +H P+ SV + ++I S + +D + KIW
Sbjct: 155 ---WEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSAS--HDGSCKIW 197
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 389 (142.0 bits), Expect = 4.4e-36, P = 4.4e-36
Identities = 84/182 (46%), Positives = 117/182 (64%)
Query: 13 YTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGH 72
Y L TL GH +++S KFS G+ L +SSA+KT+ I N D + TGH
Sbjct: 77 YKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTV------KIWNMDHMICE--RTLTGH 128
Query: 73 EQGISDLA---------------TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVS 117
+ G++D+A T++++++ T+ KTL GH NYVFC NFNPQS+ +VS
Sbjct: 129 KLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVS 188
Query: 118 DTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGK 177
+F+E++RIWD+KTG C+K LPAHSDPV+A+ FNRDG++I + SYDGL RI D T NG+
Sbjct: 189 GSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWD--TANGQ 246
Query: 178 FI 179
I
Sbjct: 247 CI 248
Score = 257 (95.5 bits), Expect = 4.3e-22, P = 4.3e-22
Identities = 77/261 (29%), Positives = 129/261 (49%)
Query: 17 QTLNGHLRAVSYVKFSHDGRLLTSSSAEKTL---------LTYSLSSISNF----DSTPP 63
+TL GH V+ + +S D R + S+S +KTL +T +L +N+ + P
Sbjct: 123 RTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQ 182
Query: 64 SPLQKFTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNET 123
S L G D ++R+WDV T +KTL H++ V ++FN + I S +++
Sbjct: 183 SSLVV-----SGSFD-ESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGL 236
Query: 124 IRIWDIKTGKCLKVL-PAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFI--L 180
+RIWD G+C+K L + PV + F+ +G I+ S+ D ++ D S GK +
Sbjct: 237 VRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFS--KGKTLKQY 294
Query: 181 VGTLDNTLRLW-NYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPA 239
G ++ ++ N+S SG + K I + + + + H PV++ HP
Sbjct: 295 TGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPV 354
Query: 240 KNIIASGALDNDRTMKIWTQE 260
+NIIASGAL+ D + IW +
Sbjct: 355 QNIIASGALEPDNKIHIWRSD 375
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 389 (142.0 bits), Expect = 4.4e-36, P = 4.4e-36
Identities = 84/182 (46%), Positives = 117/182 (64%)
Query: 13 YTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGH 72
Y L TL GH +++S KFS G+ L +SSA+KT+ I N D + TGH
Sbjct: 77 YKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTV------KIWNMDHMICE--RTLTGH 128
Query: 73 EQGISDLA---------------TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVS 117
+ G++D+A T++++++ T+ KTL GH NYVFC NFNPQS+ +VS
Sbjct: 129 KLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVS 188
Query: 118 DTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGK 177
+F+E++RIWD+KTG C+K LPAHSDPV+A+ FNRDG++I + SYDGL RI D T NG+
Sbjct: 189 GSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWD--TANGQ 246
Query: 178 FI 179
I
Sbjct: 247 CI 248
Score = 257 (95.5 bits), Expect = 4.3e-22, P = 4.3e-22
Identities = 77/261 (29%), Positives = 129/261 (49%)
Query: 17 QTLNGHLRAVSYVKFSHDGRLLTSSSAEKTL---------LTYSLSSISNF----DSTPP 63
+TL GH V+ + +S D R + S+S +KTL +T +L +N+ + P
Sbjct: 123 RTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQ 182
Query: 64 SPLQKFTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNET 123
S L G D ++R+WDV T +KTL H++ V ++FN + I S +++
Sbjct: 183 SSLVV-----SGSFD-ESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGL 236
Query: 124 IRIWDIKTGKCLKVL-PAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFI--L 180
+RIWD G+C+K L + PV + F+ +G I+ S+ D ++ D S GK +
Sbjct: 237 VRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFS--KGKTLKQY 294
Query: 181 VGTLDNTLRLW-NYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPA 239
G ++ ++ N+S SG + K I + + + + H PV++ HP
Sbjct: 295 TGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPV 354
Query: 240 KNIIASGALDNDRTMKIWTQE 260
+NIIASGAL+ D + IW +
Sbjct: 355 QNIIASGALEPDNKIHIWRSD 375
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
Identities = 80/185 (43%), Positives = 116/185 (62%)
Query: 5 RSLESFRP-YTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPP 63
R E +P Y L TL GH A+S VKFS +G L SS+A+ ++ + +D
Sbjct: 20 REEEPQKPNYALRLTLAGHSAAISSVKFSPNGEWLASSAADALIIIWGA-----YDGNCK 74
Query: 64 SPLQKFTGHEQGISDLA---------------TIRLWDVPTATSLKTLIGHTNYVFCINF 108
L GH ISD+A T+++WD+ + LKTL GH+++VFC +F
Sbjct: 75 KTLY---GHSLEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDF 131
Query: 109 NPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRI 168
NP SN IVS +F+E+++IW++KTGKCLK L AHSDP++A++FN +G++IV+ SYDGL RI
Sbjct: 132 NPPSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRI 191
Query: 169 LDAST 173
DA++
Sbjct: 192 WDAAS 196
Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 82/259 (31%), Positives = 132/259 (50%)
Query: 17 QTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS---------ISNF----DSTPP 63
+TL GH +S V +S D L S+S +KTL + + S S+F D PP
Sbjct: 75 KTLYGHSLEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPP 134
Query: 64 SPLQKFTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNET 123
S L G D ++++W+V T LKTL H++ + +NFN + IVS +++
Sbjct: 135 SNLIV-----SGSFD-ESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGL 188
Query: 124 IRIWDIKTGKCLKVLPAHSDP-VTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVG 182
RIWD +G+CL+ L +P V+ + F+ +G I+T++ D ++ D S G
Sbjct: 189 CRIWDAASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTG 248
Query: 183 TLDNTLRLW-NYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKN 241
+ L+ ++S SG ++ I + + + + H D VIS A HP KN
Sbjct: 249 HKNEKYCLFASFSVTGRKWVVSGSEDNMVYIWNLQTKEIVQRLQGHTDVVISAACHPTKN 308
Query: 242 IIASGALDNDRTMKIWTQE 260
IIAS AL+ND+T+K+W+ +
Sbjct: 309 IIASAALENDKTIKVWSSD 327
>UNIPROTKB|G4MKJ2 [details] [associations]
symbol:MGG_04473 "WD repeat containing protein 5"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0043581 "mycelium development" evidence=IEP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001231
GO:GO:0043581 KO:K14963 RefSeq:XP_003710987.1
EnsemblFungi:MGG_04473T0 GeneID:2677800 KEGG:mgr:MGG_04473
Uniprot:G4MKJ2
Length = 594
Score = 255 (94.8 bits), Expect = 5.9e-30, Sum P(2) = 5.9e-30
Identities = 57/163 (34%), Positives = 92/163 (56%)
Query: 18 TLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYS--LSSISNFDSTPPSPLQKFTGHEQG 75
TL GH+ VS + +S D L + S +K + + + ++ T G G
Sbjct: 217 TLVGHMAGVSCLAWSPDSGTLATGSDDKAIRLWDRITAEPAHAVGTQDGDDDAERGRTHG 276
Query: 76 ---ISDLATIRLWDV--PTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIK 130
IS + I + P + + L+GH NYV+C+ F+P+ N + S +++E + +WD++
Sbjct: 277 GTRISGASGIGVGGGGGPARGTRRPLLGHHNYVYCLAFSPKGNILASGSYDEAVFLWDVR 336
Query: 131 TGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDAST 173
G+ ++ LPAHSDPV+ IDF RDGT++V+ S DGL RI D +T
Sbjct: 337 AGRLMRSLPAHSDPVSGIDFCRDGTLVVSCSTDGLIRIWDTAT 379
Score = 130 (50.8 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 30/88 (34%), Positives = 48/88 (54%)
Query: 84 LWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSD 143
LWDV +++L H++ V I+F +VS + + IRIWD TG+CL+ L +
Sbjct: 332 LWDVRAGRLMRSLPAHSDPVSGIDFCRDGTLVVSCSTDGLIRIWDTATGQCLRTLVHEDN 391
Query: 144 P-VTAIDFNRDGTMIVTSSYDGLYRILD 170
P VT + F+ +G I+ + D R+ D
Sbjct: 392 PAVTNVCFSPNGRYILAFNLDSCIRLWD 419
Score = 108 (43.1 bits), Expect = 5.9e-30, Sum P(2) = 5.9e-30
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 173 TPNGKFILVGTLDNTLRLWNYSTR--KILKTYSGYTNSKYCISSTFSV 218
+PNG++IL LD+ +RLW+Y K+ KTY G+ N+ + I F V
Sbjct: 400 SPNGRYILAFNLDSCIRLWDYIAHPSKVKKTYQGHVNTGFSIGGCFGV 447
Score = 108 (43.1 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 81 TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPA 140
T R+WD T + TL+GH V C+ ++P S + + + ++ IR+WD T + PA
Sbjct: 203 TARIWDAETGAHIDTLVGHMAGVSCLAWSPDSGTLATGSDDKAIRLWDRITAE-----PA 257
Query: 141 HS 142
H+
Sbjct: 258 HA 259
Score = 67 (28.6 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 22/77 (28%), Positives = 38/77 (49%)
Query: 19 LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGHEQGISD 78
L GH + ++ V+ S +GR + S+SA+ T + + ++ D+ GH G+S
Sbjct: 176 LRGHSQPIAQVRISPNGRWIASASADGTARIWDAETGAHIDT--------LVGHMAGVSC 227
Query: 79 LATIRLWDVPTATSLKT 95
LA W P + +L T
Sbjct: 228 LA----WS-PDSGTLAT 239
Score = 61 (26.5 bits), Expect = 4.9e-25, Sum P(2) = 4.9e-25
Identities = 17/70 (24%), Positives = 36/70 (51%)
Query: 175 NGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHR-DPVIS 233
+G ++ + D +R+W+ +T + L+T N +++ NG+YI++ D I
Sbjct: 359 DGTLVVSCSTDGLIRIWDTATGQCLRTLVHEDNP--AVTNVCFSPNGRYILAFNLDSCIR 416
Query: 234 V---ASHPAK 240
+ +HP+K
Sbjct: 417 LWDYIAHPSK 426
Score = 49 (22.3 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 11/56 (19%), Positives = 27/56 (48%)
Query: 171 ASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVS 226
A +P G + G+ D + LW+ +++++ +++ +S +G +VS
Sbjct: 313 AFSPKGNILASGSYDEAVFLWDVRAGRLMRSLPAHSDP---VSGIDFCRDGTLVVS 365
>POMBASE|SPBC354.03 [details] [associations]
symbol:swd3 "WD repeat protein Swd3" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IC] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006342 "chromatin silencing" evidence=IC] [GO:0048188
"Set1C/COMPASS complex" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC354.03 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0000790 GO:GO:0006342
GO:GO:0048188 GO:GO:0051568 PIR:T40283 RefSeq:NP_595227.1
ProteinModelPortal:O43017 STRING:O43017 EnsemblFungi:SPBC354.03.1
GeneID:2540929 KEGG:spo:SPBC354.03 KO:K14963 OrthoDB:EOG49CTJ0
NextBio:20802044 Uniprot:O43017
Length = 380
Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 66/173 (38%), Positives = 104/173 (60%)
Query: 5 RSLESFRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTL-----LTYSLSSISNFD 59
R+ ES ++ TL GH ++V+ V S + R + +SS++ T+ LT+ L
Sbjct: 36 RNYESHSGFSEYCTLFGHEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTLFGH 95
Query: 60 STPPSPLQKFTGHEQ--GISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVS 117
S ++ TG + SD TIR+WD S++ L GHTNYV I+FNP +VS
Sbjct: 96 YRGISQVKWATGSKYLASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPLGTLLVS 155
Query: 118 DTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
+++ET+RIW+++ G CL++LPAHS+P+ ++ + DGT+ T+SYDG+ RI D
Sbjct: 156 GSWDETVRIWNLQDGTCLRMLPAHSEPIISVSISADGTLCATASYDGMARIWD 208
Score = 162 (62.1 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 61/267 (22%), Positives = 117/267 (43%)
Query: 2 SSDRSLESFRPYT--LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYS-------- 51
SSD +++ + T L TL GH R +S VK++ + L S+S +KT+ +
Sbjct: 73 SSDGTIKIWSALTFRLECTLFGHYRGISQVKWATGSKYLASASDDKTIRIWDFEKRCSVR 132
Query: 52 -LSSISNFDSTPP-SPLQKFTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFN 109
L +N+ S+ +PL G D T+R+W++ T L+ L H+ + ++ +
Sbjct: 133 CLKGHTNYVSSIDFNPLGTLL--VSGSWD-ETVRIWNLQDGTCLRMLPAHSEPIISVSIS 189
Query: 110 PQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSD-PVTAIDFNRDGTMIVTSSYDGLYRI 168
+ +++ RIWD+ +G+CLK L + P++ + F + ++ S+ + R+
Sbjct: 190 ADGTLCATASYDGMARIWDVLSGQCLKTLVEPINVPLSNLQFTENRKYLLVSNLNSQIRL 249
Query: 169 LDASTPNGKFILVGTLDNTLRL-WN-YSTRKILKTYSGYTN--SKYCISSTFSVTNGKYI 224
D I ++ + W+ YS++ I K N S Y + + + +
Sbjct: 250 WDYRRNRVVRIFDSHVNTRYSMSWDCYSSKNIPKNTEALPNNDSSYPDDAESFMHDAYLL 309
Query: 225 VSHRDPVISVASHPAKNIIASGALDND 251
+ D I + K II +D
Sbjct: 310 IPSEDGTIQITDPSTKIIIDDSIRHSD 336
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 286 (105.7 bits), Expect = 1.5e-24, P = 1.5e-24
Identities = 65/164 (39%), Positives = 96/164 (58%)
Query: 19 LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS---ISNFDSTPPSPLQKFTGHEQG 75
L GHLR VS V+FS D ++ S A+ + ++ S+ I F+ + + G
Sbjct: 172 LRGHLRGVSAVRFSPDASMIASGGADGAVKVWAASTGKLIYTFEGHLAG-ISTISWSPDG 230
Query: 76 I-----SDLATIRLWDVPTATSLKT-LIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDI 129
SD TIRLW+V T + T IGH NYV+ I F+P+ N +VS +++E + +WD+
Sbjct: 231 ATIASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFSPKGNMLVSGSYDEAVFLWDV 290
Query: 130 KTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDAST 173
++ + +K LPAHSDPV+ ID DGT+I + + DGL RI D ST
Sbjct: 291 RSARVMKSLPAHSDPVSGIDVVWDGTLIASCATDGLVRIWDTST 334
Score = 184 (69.8 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 55/215 (25%), Positives = 96/215 (44%)
Query: 21 GHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPP--SPLQKFTGHEQG--I 76
GH V + FS G +L S S ++ + + + S S P P+ G I
Sbjct: 259 GHHNYVYAIAFSPKGNMLVSGSYDEAVFLWDVRSARVMKSLPAHSDPVSGIDVVWDGTLI 318
Query: 77 SDLAT---IRLWDVPTATSLKTLIGHTNY-VFCINFNPQSNRIVSDTFNETIRIWDIKTG 132
+ AT +R+WD T L+TL+ N V + F+P +++ T ++ +R+WD G
Sbjct: 319 ASCATDGLVRIWDTSTGQCLRTLVHEDNPPVSSVKFSPNGKYVLAWTLDDCVRLWDYVEG 378
Query: 133 KCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLY-RILDASTPNGKFILVGTLDNTLRLW 191
+CLK HS+ ++ G G+Y + + TP F + G+ D + W
Sbjct: 379 RCLKTYQGHSNK----KYSLSGAF-------GVYGQSIPGRTPGYAFAVSGSEDGAILCW 427
Query: 192 NYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVS 226
+ T+K+L+ + + T S G+++VS
Sbjct: 428 DVVTKKVLQRIEAHDGVVLGVD-TCSTGEGRFMVS 461
Score = 164 (62.8 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 49/173 (28%), Positives = 82/173 (47%)
Query: 15 LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGHEQ 74
L T GHL +S + +S DG + S S +KT+ +++ + P+P F GH
Sbjct: 210 LIYTFEGHLAGISTISWSPDGATIASGSDDKTIRLWNVLT----GKAHPTP---FIGHHN 262
Query: 75 GISDLA---------------TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDT 119
+ +A + LWDV +A +K+L H++ V I+ I S
Sbjct: 263 YVYAIAFSPKGNMLVSGSYDEAVFLWDVRSARVMKSLPAHSDPVSGIDVVWDGTLIASCA 322
Query: 120 FNETIRIWDIKTGKCLKVLPAHSD--PVTAIDFNRDGTMIVTSSYDGLYRILD 170
+ +RIWD TG+CL+ L H D PV+++ F+ +G ++ + D R+ D
Sbjct: 323 TDGLVRIWDTSTGQCLRTL-VHEDNPPVSSVKFSPNGKYVLAWTLDDCVRLWD 374
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 265 (98.3 bits), Expect = 1.8e-21, P = 1.8e-21
Identities = 84/275 (30%), Positives = 135/275 (49%)
Query: 2 SSDRSLESFRPYT--LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFD 59
S +++ + P T L QTL GH ++V V FS DG+ L SSS++ T I ++
Sbjct: 937 SEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTT--------IKLWN 988
Query: 60 STPPSPLQKFTGHEQGI---------------SDLATIRLWDVPTATSLKTLIGHTNYVF 104
ST Q F GH+ I SD TI+LWD+ T+ ++L H+ V
Sbjct: 989 STTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVH 1048
Query: 105 CINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDG 164
+ F+P ++ S + + TI++WD TG+ + L HS V ++ F+ DG ++ ++SYDG
Sbjct: 1049 AVAFSPDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDG 1108
Query: 165 LYRILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNS--KYCISSTFSVTNGK 222
++ + T + L G D + K L SGY +S K S+T + +
Sbjct: 1109 TIKLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQLA--SGYYDSTIKLWDSATGELL--Q 1164
Query: 223 YIVSHRDPVISVASHPAKNIIASGALDNDRTMKIW 257
+ H D + SV P ++ASG+ D +T K+W
Sbjct: 1165 TLEGHSDRIQSVVFSPDGKLLASGSYD--QTAKLW 1197
Score = 223 (83.6 bits), Expect = 5.5e-17, P = 5.5e-17
Identities = 57/169 (33%), Positives = 93/169 (55%)
Query: 15 LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTL---------LTYSLSSISNF-DSTPPS 64
L +TL GH + V V FS DG+LL S+S + T+ L +L+ S++ DS S
Sbjct: 1078 LQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFS 1137
Query: 65 PLQKFTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETI 124
P K G D +TI+LWD T L+TL GH++ + + F+P + S ++++T
Sbjct: 1138 PDGKQLA--SGYYD-STIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKLLASGSYDQTA 1194
Query: 125 RIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDAST 173
++WD TG+ L++ HS V ++ F+ DG ++ +SSY ++ D T
Sbjct: 1195 KLWDPATGELLQIFEGHSKWVESVAFSPDGKLLASSSYGETIKLWDPVT 1243
Score = 215 (80.7 bits), Expect = 3.9e-16, P = 3.9e-16
Identities = 72/250 (28%), Positives = 115/250 (46%)
Query: 17 QTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYS------LSSISNFDSTPPSPLQKFT 70
QTL HL V V FS DG+ L S S + T+ + L ++ T S
Sbjct: 744 QTLENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPD 803
Query: 71 GH--EQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWD 128
G G D TI LWD T L+T GH + ++ + F P + S + + TI+IWD
Sbjct: 804 GKLLASGSYD-NTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWD 862
Query: 129 IKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTL 188
+ TG+ + L +HS V ++ F+ DG ++ +SS D ++ + +T + L G +
Sbjct: 863 LATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGR-SGWV 921
Query: 189 RLWNYSTR-KILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGA 247
+ +S K L + S K +T + + + H V SVA P +AS +
Sbjct: 922 KSVAFSPDGKKLASGSEKNTVKLWNPATGELL--QTLEGHSQSVRSVAFSPDGKQLASSS 979
Query: 248 LDNDRTMKIW 257
+D T+K+W
Sbjct: 980 --SDTTIKLW 987
Score = 213 (80.0 bits), Expect = 6.4e-16, P = 6.4e-16
Identities = 77/269 (28%), Positives = 132/269 (49%)
Query: 2 SSDRSLESFRPYT--LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS---IS 56
S D +++ + P T L QTL+GH V + FS DG+LL S S + T+ + ++ +
Sbjct: 769 SYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPDGKLLASGSYDNTIDLWDSATGELLQ 828
Query: 57 NFDSTPPSPLQ-KFT--GHE-QGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQS 112
F+ P S F G E SD +TI++WD+ T +TL H+ V + F+P
Sbjct: 829 TFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDG 888
Query: 113 NRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDAS 172
+ S + + TI++W+ TG+ + L S V ++ F+ DG + + S ++ + +
Sbjct: 889 KLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPA 948
Query: 173 TPNGKFILVGTLDN---TLRLWNYSTR-KILKTYSGYTNSKYCISSTFSVTNGKYIVSHR 228
T G+ L+ TL+ ++R +S K L + S T K S+T + + H
Sbjct: 949 T--GE--LLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQ--QTFKGHD 1002
Query: 229 DPVISVASHPAKNIIASGALDNDRTMKIW 257
+ +VA P + SG+ DN T+K+W
Sbjct: 1003 LWIRAVAFSPDGKHLVSGSDDN--TIKLW 1029
Score = 209 (78.6 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 53/174 (30%), Positives = 87/174 (50%)
Query: 15 LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGHEQ 74
L Q+L H R+V V FS D + L SSS + T I +DS + GH Q
Sbjct: 1036 LQQSLEDHSRSVHAVAFSPDDKQLASSSLDST--------IKLWDSATGELQRTLEGHSQ 1087
Query: 75 GISDLA---------------TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDT 119
G+ + TI+LW+ T +TL G +++V + F+P ++ S
Sbjct: 1088 GVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQLASGY 1147
Query: 120 FNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDAST 173
++ TI++WD TG+ L+ L HSD + ++ F+ DG ++ + SYD ++ D +T
Sbjct: 1148 YDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKLLASGSYDQTAKLWDPAT 1201
Score = 205 (77.2 bits), Expect = 4.5e-15, P = 4.5e-15
Identities = 71/267 (26%), Positives = 128/267 (47%)
Query: 2 SSDRSLESFRPYT--LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFD 59
S D +++ + T L QT GH ++ V F+ DG+ L S+S + T+ + L++
Sbjct: 811 SYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDLAT-GELQ 869
Query: 60 STPPSPLQK-----FT--GHEQGISDL-ATIRLWDVPTATSLKTLIGHTNYVFCINFNPQ 111
T S Q F+ G S L +TI++W+ T ++L G + +V + F+P
Sbjct: 870 QTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPD 929
Query: 112 SNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDA 171
++ S + T+++W+ TG+ L+ L HS V ++ F+ DG + +SS D ++ ++
Sbjct: 930 GKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNS 989
Query: 172 STPNGKFILVGTLDNTLRLWNYSTR-KILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDP 230
+T + G D +R +S K L + S K +T + + H
Sbjct: 990 TTGELQQTFKGH-DLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQS--LEDHSRS 1046
Query: 231 VISVASHPAKNIIASGALDNDRTMKIW 257
V +VA P +AS +LD+ T+K+W
Sbjct: 1047 VHAVAFSPDDKQLASSSLDS--TIKLW 1071
Score = 167 (63.8 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 70/265 (26%), Positives = 109/265 (41%)
Query: 2 SSDRSLESFRPYT--LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFD 59
S D +++ + P T L QTL G V V FS DG+ L S Y S+I +D
Sbjct: 1105 SYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQLASG--------YYDSTIKLWD 1156
Query: 60 STPPSPLQKFTGHEQGISDLA---------------TIRLWDVPTATSLKTLIGHTNYVF 104
S LQ GH I + T +LWD T L+ GH+ +V
Sbjct: 1157 SATGELLQTLEGHSDRIQSVVFSPDGKLLASGSYDQTAKLWDPATGELLQIFEGHSKWVE 1216
Query: 105 CINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIV------ 158
+ F+P + S ++ ETI++WD TG+ L+ L + ++ F+ DG +
Sbjct: 1217 SVAFSPDGKLLASSSYGETIKLWDPVTGELLQTLNDPDESAGSVAFSPDGNRLASVDIFD 1276
Query: 159 TSSYD-GLYRILDASTPNGKFILVGT---LDNTLRLWN-YSTRKILKTYSGYTNSKYCIS 213
T +D +L A + K++ T + L W ++IL Y +CIS
Sbjct: 1277 TKIWDPATGELLQALKGHSKWVWSRTGAGISIFLDQWLCLQEKRILWLPQSY--QPFCIS 1334
Query: 214 STFSVTNGKYIVSHRDPVISVASHP 238
V +G ++ H +S P
Sbjct: 1335 ----VNDGVLVLGHSSGRVSFIQGP 1355
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 242 (90.2 bits), Expect = 5.3e-20, P = 5.3e-20
Identities = 75/262 (28%), Positives = 131/262 (50%)
Query: 2 SSDRSLESFRPYT--LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFD 59
S+D +++ + P + L QTL GH +V V FS +G+LL S S++ T+ ++ +S D
Sbjct: 60 SNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSPNGQLLASGSSDTTIKLWNSAS----D 115
Query: 60 STPPSPLQKFTGHEQGISDLATI---RLWDVPTATSLK-TLIGHTNYVFCINFNPQSNRI 115
S + GH + +A +LW+ P SLK T+ GH+++V + F+P +
Sbjct: 116 SLKHT----MEGHSDRVESVAFSPNGQLWN-PAIGSLKHTIEGHSDWVLSVAFSPDGQLL 170
Query: 116 VSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPN 175
S + +TI++WD T L HS+ V + F+ DG ++ + S D ++ D + +
Sbjct: 171 ASGSAEKTIKLWDSATCGLKHTLGGHSNWVLPLVFSPDGRLLASGSNDATIKLWDPPSGS 230
Query: 176 GKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVA 235
K L G N + +S L SG +++ + T + + + H D V+SV
Sbjct: 231 LKHTLEGH-SNKIESLAFSPNGQLLA-SGSSDATIKLWDTATGSFRHTLKGHSDMVLSVV 288
Query: 236 SHPAKNIIASGALDNDRTMKIW 257
P ++ SG+ DN T+K+W
Sbjct: 289 FSPDSQLLESGSGDN--TIKLW 308
Score = 216 (81.1 bits), Expect = 4.0e-17, P = 4.0e-17
Identities = 59/171 (34%), Positives = 89/171 (52%)
Query: 14 TLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTL---------LTYSLSSISNFDSTPP- 63
+L T+ GH V V FS DG+LL S SAEKT+ L ++L SN+ P
Sbjct: 146 SLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHSNW-VLPLV 204
Query: 64 -SPLQKFTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNE 122
SP + G +D ATI+LWD P+ + TL GH+N + + F+P + S + +
Sbjct: 205 FSPDGRLLA--SGSND-ATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSSDA 261
Query: 123 TIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDAST 173
TI++WD TG L HSD V ++ F+ D ++ + S D ++ D +T
Sbjct: 262 TIKLWDTATGSFRHTLKGHSDMVLSVVFSPDSQLLESGSGDNTIKLWDPAT 312
Score = 176 (67.0 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 69/250 (27%), Positives = 118/250 (47%)
Query: 17 QTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS--ISNFDSTPPSPLQK--FTGH 72
QTL GH + V FS DGRLL S S + T+ + +S + S +Q F+ +
Sbjct: 35 QTLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSPN 94
Query: 73 EQ----GISDLATIRLWDVPTATSLK-TLIGHTNYVFCINFNPQSNRIVSDTFNETIRIW 127
Q G SD TI+LW+ + SLK T+ GH++ V + F+P ++W
Sbjct: 95 GQLLASGSSD-TTIKLWN-SASDSLKHTMEGHSDRVESVAFSPNG------------QLW 140
Query: 128 DIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNT 187
+ G + HSD V ++ F+ DG ++ + S + ++ D++T K L G +
Sbjct: 141 NPAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHSNWV 200
Query: 188 LRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGA 247
L L ++L + S K + S+ + + H + + S+A P ++ASG+
Sbjct: 201 LPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHT--LEGHSNKIESLAFSPNGQLLASGS 258
Query: 248 LDNDRTMKIW 257
+D T+K+W
Sbjct: 259 --SDATIKLW 266
Score = 171 (65.3 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 56/171 (32%), Positives = 88/171 (51%)
Query: 2 SSDRSLESFRPYT--LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTL---------LTY 50
S++++++ + T L TL GH V + FS DGRLL S S + T+ L +
Sbjct: 174 SAEKTIKLWDSATCGLKHTLGGHSNWVLPLVFSPDGRLLASGSNDATIKLWDPPSGSLKH 233
Query: 51 SLSSISN-FDSTPPSPLQKFTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFN 109
+L SN +S SP + G SD ATI+LWD T + TL GH++ V + F+
Sbjct: 234 TLEGHSNKIESLAFSPNGQLLA--SGSSD-ATIKLWDTATGSFRHTLKGHSDMVLSVVFS 290
Query: 110 PQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTS 160
P S + S + + TI++WD TG LK V +I+F+ + ++T+
Sbjct: 291 PDSQLLESGSGDNTIKLWDPATG-ILKHSMRTPGIVRSIEFSIELPQLITN 340
Score = 147 (56.8 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 42/165 (25%), Positives = 85/165 (51%)
Query: 93 LKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNR 152
L+TL GH++++ + F+P + S + + TI++WD +G + L HS V ++ F+
Sbjct: 34 LQTLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSP 93
Query: 153 DGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCI 212
+G ++ + S D ++ ++++ + K + G +S R +S N +
Sbjct: 94 NGQLLASGSSDTTIKLWNSASDSLKHTMEG----------HSDRVESVAFS--PNGQLWN 141
Query: 213 SSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDNDRTMKIW 257
+ S+ + I H D V+SVA P ++ASG+ + +T+K+W
Sbjct: 142 PAIGSLKHT--IEGHSDWVLSVAFSPDGQLLASGSAE--KTIKLW 182
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 249 (92.7 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 73/253 (28%), Positives = 127/253 (50%)
Query: 14 TLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS---ISNFDSTPPSPLQKFT 70
TL + L GH +V V FSHD RL+ S S ++T+ + ++ F+ S +
Sbjct: 338 TLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSF 397
Query: 71 GHEQ----GISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRI 126
H+ SD +++WD T + L GH + V ++F+P S + S + + T++I
Sbjct: 398 AHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKI 457
Query: 127 WDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDN 186
W TG + L H+D V ++ F+ D +I ++S D +I D +T + L DN
Sbjct: 458 WHAATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTATVPLQNNLESH-DN 516
Query: 187 TLR--LWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIA 244
+R ++++ +R +L + S K ++T S+ N + H D V SV+ P ++A
Sbjct: 517 WVRSVVFSHDSR-LLASASDDMTVKIWDTATGSLENT--LEGHDDRVNSVSFSPDSRLLA 573
Query: 245 SGALDNDRTMKIW 257
S + +D T+KIW
Sbjct: 574 SAS--DDGTVKIW 584
Score = 237 (88.5 bits), Expect = 2.6e-18, P = 2.6e-18
Identities = 75/246 (30%), Positives = 122/246 (49%)
Query: 21 GHLRAVSYVKFSHDGRLLTSSSAEKTLLTY--SLSSISNFDSTPPSPLQKFT-GHEQGI- 76
GH RAV V FSHD RLL S+S + T+ + + S + N ++ H+ +
Sbjct: 261 GHDRAVGSVSFSHDSRLLASASGDGTVKIWDTATSFLQNTLEGHNEWVKSVVFSHDSRLL 320
Query: 77 ---SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGK 133
SD T+++WD T T + L GH + V + F+ S I S + + T+RIW+ TG
Sbjct: 321 ASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTTGL 380
Query: 134 CLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNY 193
H D V A+ F D + ++S G +I D T + + +L G D+ + ++
Sbjct: 381 LRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLEGH-DDCVNSVSF 439
Query: 194 ST-RKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVA-SHPAKNIIASGALDND 251
S ++L + S K ++T S+ + + H D V SV SH ++ +IAS + +D
Sbjct: 440 SPDSRLLASASDDRTVKIWHAATGSLQ--RTLEGHNDWVRSVVFSHDSR-LIASAS--DD 494
Query: 252 RTMKIW 257
T+KIW
Sbjct: 495 MTVKIW 500
Score = 218 (81.8 bits), Expect = 2.8e-16, P = 2.8e-16
Identities = 70/252 (27%), Positives = 121/252 (48%)
Query: 15 LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS--ISNFDSTPPSPLQKFT-G 71
L TL GH V V FSHD RLL S+S + T+ + ++ + ++
Sbjct: 297 LQNTLEGHNEWVKSVVFSHDSRLLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFS 356
Query: 72 HEQGI----SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIW 127
H+ + S+ T+R+W+ T T H + V ++F S R+ S + ++IW
Sbjct: 357 HDSRLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIW 416
Query: 128 DIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNT 187
D +TG VL H D V ++ F+ D ++ ++S D +I A+T + + L G D
Sbjct: 417 DTRTGSLQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWV 476
Query: 188 LRL-WNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVA-SHPAKNIIAS 245
+ +++ +R I T K ++T + N + SH + V SV SH ++ ++AS
Sbjct: 477 RSVVFSHDSRLIASASDDMT-VKIWDTATVPLQNN--LESHDNWVRSVVFSHDSR-LLAS 532
Query: 246 GALDNDRTMKIW 257
+ +D T+KIW
Sbjct: 533 AS--DDMTVKIW 542
Score = 198 (74.8 bits), Expect = 3.7e-14, P = 3.7e-14
Identities = 75/272 (27%), Positives = 130/272 (47%)
Query: 2 SSDRSLESFRPYT--LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSL--SSISN 57
S+DR++ + T L T H +V V F+HD R L S+S + + S+ N
Sbjct: 366 SNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQN 425
Query: 58 F--------DSTPPSPLQKFTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFN 109
+S SP + SD T+++W T + +TL GH ++V + F+
Sbjct: 426 VLEGHDDCVNSVSFSPDSRLLA---SASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFS 482
Query: 110 PQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRIL 169
S I S + + T++IWD T L +H + V ++ F+ D ++ ++S D +I
Sbjct: 483 HDSRLIASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVKIW 542
Query: 170 DASTPNGKFILVGTLDNTLRLWNYST-RKILKTYSGYTNSKYCISSTFSVTNGKYIVSHR 228
D +T + + L G D+ + ++S ++L + S K ++T +V + + S R
Sbjct: 543 DTATGSLENTLEGH-DDRVNSVSFSPDSRLLASASDDGTVKIWYAATGTVQH-TFDGSGR 600
Query: 229 DPVISVASHPAKNIIASGALDNDRTMKIWTQE 260
IS+A N++AS A+D D T+KIW E
Sbjct: 601 -VAISLAFSHTSNLLAS-AMD-DGTVKIWDME 629
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 207 (77.9 bits), Expect = 3.4e-16, P = 3.4e-16
Identities = 50/182 (27%), Positives = 91/182 (50%)
Query: 81 TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPA 140
T +LW V T T GHT + C++FNPQS + + + + T ++WDI++G+ + L
Sbjct: 158 TCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTG 217
Query: 141 HSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVG-TLDNTLRLWNYSTRKIL 199
HS + ++ FN G I+T S+D + +A T + L+G + + ++N+ IL
Sbjct: 218 HSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLIL 277
Query: 200 KTYSGYTNSKYCISSTFSVTNGKYIVS---HRDPVISVASHPAKNIIASGALDNDRTMKI 256
+G + K C + NGK + + H D ++ +IA+ + D T +I
Sbjct: 278 ---TG-SMDKTC--KLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIATASADG--TARI 329
Query: 257 WT 258
++
Sbjct: 330 FS 331
Score = 206 (77.6 bits), Expect = 4.4e-16, P = 4.4e-16
Identities = 48/179 (26%), Positives = 88/179 (49%)
Query: 81 TIRLWDVPTATSLKTLIGHTNYVFCINFN-PQSNRIVSDTFNETIRIWDIKTGKCLKVLP 139
T +LWD + L TL GH N V+ I FN P ++I + +F++T ++W ++TGKC
Sbjct: 115 TCKLWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFR 174
Query: 140 AHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRL-WNYSTRKI 198
H+ + + FN T++ T S D ++ D + F L G + L +N S +I
Sbjct: 175 GHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRI 234
Query: 199 LKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDNDRTMKIW 257
+ +T + + + V ++ H + S + ++I +G++D +T K+W
Sbjct: 235 ITGSFDHTVTVWEADTGRKVYT---LIGHCAEISSAVFNWDCSLILTGSMD--KTCKLW 288
Score = 205 (77.2 bits), Expect = 3.6e-19, Sum P(2) = 3.6e-19
Identities = 49/158 (31%), Positives = 81/158 (51%)
Query: 18 TLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYS------LSSISNFDSTPPSPLQKFTG 71
TL GH +S F+ D L+ + S +KT + +++++ D +TG
Sbjct: 256 TLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTG 315
Query: 72 HEQGISDL-ATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIK 130
+ T R++ T + L GH + I+FNPQ NR+++ + ++T RIWD +
Sbjct: 316 KLIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQ 375
Query: 131 TGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRI 168
TG+CL+VL H+D + + FN G +I+T S D RI
Sbjct: 376 TGQCLQVLEGHTDEIFSCAFNYKGDIIITGSKDNTCRI 413
Score = 133 (51.9 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 34/114 (29%), Positives = 51/114 (44%)
Query: 81 TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPA 140
T +LWD + TL GH + + F+ I + + + T RI+ T +C+ L
Sbjct: 284 TCKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEG 343
Query: 141 HSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRL-WNY 193
H ++ I FN G ++T S D RI DA T +L G D +NY
Sbjct: 344 HEGEISKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNY 397
Score = 121 (47.7 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 33/118 (27%), Positives = 59/118 (50%)
Query: 18 TLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS---ISNFDSTPPSPLQKFTGHEQ 74
TL GH + F + G+L+ ++SA+ T +S ++ ++ + + K + + Q
Sbjct: 298 TLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHE-GEISKISFNPQ 356
Query: 75 GISDLA-----TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIW 127
G L T R+WD T L+ L GHT+ +F FN + + I++ + + T RIW
Sbjct: 357 GNRLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGDIIITGSKDNTCRIW 414
Score = 50 (22.7 bits), Expect = 3.6e-19, Sum P(2) = 3.6e-19
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 176 GKFILVGTLDNTLRLW 191
G I+ G+ DNT R+W
Sbjct: 399 GDIIITGSKDNTCRIW 414
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 230 (86.0 bits), Expect = 2.5e-18, P = 2.5e-18
Identities = 73/253 (28%), Positives = 127/253 (50%)
Query: 17 QTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSIS-NFDSTPPSPLQKFT--GHE 73
Q L GH AV V +SHD RLL S+S ++T+ + + S S L + H+
Sbjct: 290 QALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFSHD 349
Query: 74 QGI----SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDI 129
+ SD +T+++WD T + TL GH ++V + F+ S + S + + T++IWD
Sbjct: 350 SRLLASASD-STVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDT 408
Query: 130 KTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLR 189
TG L H D V ++ F+ D ++ ++S D +I D T + + L G D
Sbjct: 409 GTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRS 468
Query: 190 -LWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVA-SHPAKNIIASGA 247
++++ +R +L + S + I T ++ + H V SV+ SH ++ ++AS +
Sbjct: 469 VIFSHDSR-LLASASDDRTVR--IWDTEKGSHKHTLEGHSSLVTSVSFSHDSR-LLASAS 524
Query: 248 LDNDRTMKIWTQE 260
ND+T++IW E
Sbjct: 525 --NDQTVRIWDIE 535
Score = 201 (75.8 bits), Expect = 3.4e-15, P = 3.4e-15
Identities = 56/186 (30%), Positives = 97/186 (52%)
Query: 77 SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLK 136
SD T+++WD T + TL GH++ V + F+ S R+++ + T++IWD TG
Sbjct: 315 SDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFSHDS-RLLASASDSTVKIWDTGTGSLQH 373
Query: 137 VLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYSTR 196
L H D V ++ F+ D ++ ++S D +I D T + + L G D +
Sbjct: 374 TLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDS 433
Query: 197 KILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVA-SHPAKNIIASGALDNDRTMK 255
++L + S + K + T S+ + + HRD V SV SH ++ ++AS + +DRT++
Sbjct: 434 QLLASASDDSTVKIWDTGTGSLQHT--LEGHRDWVRSVIFSHDSR-LLASAS--DDRTVR 488
Query: 256 IWTQEK 261
IW EK
Sbjct: 489 IWDTEK 494
Score = 200 (75.5 bits), Expect = 3.9e-17, Sum P(2) = 3.9e-17
Identities = 57/190 (30%), Positives = 91/190 (47%)
Query: 2 SSDRSLESFRPYT--LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSIS--- 56
S DR+++ + T L TL GH V V FSHD RLL S+S + T+ + + S
Sbjct: 315 SDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFSHDSRLLASAS-DSTVKIWDTGTGSLQH 373
Query: 57 NFDSTPPSPLQKFTGHEQGI----SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQS 112
+ H+ + SD +T+++WD T + TL GH ++V + F+ S
Sbjct: 374 TLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDS 433
Query: 113 NRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDAS 172
+ S + + T++IWD TG L H D V ++ F+ D ++ ++S D RI D
Sbjct: 434 QLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTE 493
Query: 173 TPNGKFILVG 182
+ K L G
Sbjct: 494 KGSHKHTLEG 503
Score = 198 (74.8 bits), Expect = 7.1e-15, P = 7.1e-15
Identities = 59/198 (29%), Positives = 92/198 (46%)
Query: 14 TLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSIS---NFDSTPPSPLQKFT 70
+L TL GH V V FSHD +LL S+S + T+ + + S +
Sbjct: 370 SLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIF 429
Query: 71 GHEQGI----SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRI 126
H+ + SD +T+++WD T + TL GH ++V + F+ S + S + + T+RI
Sbjct: 430 SHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSRLLASASDDRTVRI 489
Query: 127 WDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILD--ASTPNGKFILVGTL 184
WD + G L HS VT++ F+ D ++ ++S D RI D A + F L T+
Sbjct: 490 WDTEKGSHKHTLEGHSSLVTSVSFSHDSRLLASASNDQTVRIWDIEARSLQHTFDLDATI 549
Query: 185 -----DNTLRLWNYSTRK 197
D LW T K
Sbjct: 550 EAMRFDKATSLWIQVTVK 567
Score = 158 (60.7 bits), Expect = 6.8e-09, P = 6.8e-09
Identities = 48/166 (28%), Positives = 85/166 (51%)
Query: 93 LKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNR 152
L+ L GH V ++++ S + S + + T++IWD +TG L HSD V ++ F+
Sbjct: 289 LQALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFSH 348
Query: 153 DGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCI 212
D ++ ++S D +I D T + + L G D + ++L + S + K
Sbjct: 349 DSRLLASAS-DSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWD 407
Query: 213 SSTFSVTNGKYIVSHRDPVISVA-SHPAKNIIASGALDNDRTMKIW 257
+ T S+ + + HRD V SV SH ++ ++AS + +D T+KIW
Sbjct: 408 TGTGSLQHT--LEGHRDWVRSVIFSHDSQ-LLASAS--DDSTVKIW 448
Score = 42 (19.8 bits), Expect = 3.9e-17, Sum P(2) = 3.9e-17
Identities = 6/18 (33%), Positives = 11/18 (61%)
Query: 185 DNTLRLWNYSTRKILKTY 202
D T+R+W+ R + T+
Sbjct: 526 DQTVRIWDIEARSLQHTF 543
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 225 (84.3 bits), Expect = 3.6e-18, P = 3.6e-18
Identities = 71/254 (27%), Positives = 120/254 (47%)
Query: 19 LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDST---PPSPLQKFTGHEQG 75
L GH ++ VKF L+ S+S + T+ + S F+ T + +Q + G
Sbjct: 102 LTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFES-GEFERTLKGHTNAVQDIDFDKTG 160
Query: 76 --ISDLA---TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIK 130
++ + TI+LWD T +KTL GH + V C+ F P ++++S + ++TI++W+
Sbjct: 161 NLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAA 220
Query: 131 TGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRL 190
TG C+K L H D V I + DG+ I AS N D T++
Sbjct: 221 TGYCIKTLVGHEDWVRKITVSEDGSCI-------------ASCSN---------DQTIKT 258
Query: 191 WNYSTRKILKTYSGYTNSKYCIS-STFSVTN--GKYIVSHRDPVISVASHPAKNIIAS-G 246
WN + L TY +++ C++ ST ++ + G ++S + V P N++ G
Sbjct: 259 WNIVKGECLATYREHSHVVECLAFSTANIIDIPGS-LLSTPEGKSKVKQGPGGNLVGQCG 317
Query: 247 AL---DNDRTMKIW 257
L D+T+KIW
Sbjct: 318 YLATGSRDKTIKIW 331
Score = 206 (77.6 bits), Expect = 4.6e-16, P = 4.6e-16
Identities = 60/208 (28%), Positives = 101/208 (48%)
Query: 17 QTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLL-----TYS-LSSISNFDSTPPSPLQKFT 70
+TL GH AV + F G LL S SA+ T+ TY + ++ D +FT
Sbjct: 142 RTLKGHTNAVQDIDFDKTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCV--RFT 199
Query: 71 -GHEQGISDLA--TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIW 127
+Q IS TI++W+ T +KTL+GH ++V I + + I S + ++TI+ W
Sbjct: 200 PSGDQLISSSRDKTIKVWEAATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTW 259
Query: 128 DIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSY----DGLYRILDASTPN--GK--FI 179
+I G+CL HS V + F+ + + S +G ++ N G+ ++
Sbjct: 260 NIVKGECLATYREHSHVVECLAFSTANIIDIPGSLLSTPEGKSKVKQGPGGNLVGQCGYL 319
Query: 180 LVGTLDNTLRLWNYSTRKILKTYSGYTN 207
G+ D T+++W +T + L TY G+ N
Sbjct: 320 ATGSRDKTIKIWELATGRCLATYIGHDN 347
Score = 161 (61.7 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 30/89 (33%), Positives = 52/89 (58%)
Query: 81 TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVL-P 139
TI++W++ T L T IGH N+V + F+P ++S ++TIR+WDI G+C+K +
Sbjct: 327 TIKIWELATGRCLATYIGHDNWVRAVRFHPCGKFLLSVGDDKTIRVWDIAQGRCIKTINE 386
Query: 140 AHSDPVTAIDFNRDGTMIVTSSYDGLYRI 168
AH+ ++ +DF I T D + ++
Sbjct: 387 AHTHFISCLDFCLHNPHIATGGVDDVIKV 415
Score = 149 (57.5 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 49/180 (27%), Positives = 82/180 (45%)
Query: 87 VPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVT 146
+P L GH N + + F+P + +VS + + TI++WD ++G+ + L H++ V
Sbjct: 93 LPRPPEKHILTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQ 152
Query: 147 AIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTL---------RLWNYSTRK 197
IDF++ G ++ + S D ++ D T + L G N +L + S K
Sbjct: 153 DIDFDKTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDK 212
Query: 198 ILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDNDRTMKIW 257
+K + T YCI K +V H D V + + IAS ND+T+K W
Sbjct: 213 TIKVWEAATG--YCI---------KTLVGHEDWVRKITVSEDGSCIAS--CSNDQTIKTW 259
Score = 115 (45.5 bits), Expect = 0.00040, P = 0.00040
Identities = 43/175 (24%), Positives = 79/175 (45%)
Query: 2 SSDRSLESFRPYT--LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFD 59
S D++++ + T +TL GH V + S DG + S S ++T+ T+++
Sbjct: 209 SRDKTIKVWEAATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNI------- 261
Query: 60 STPPSPLQKFTGHEQGISDLA--TIRLWDVPTATSLKTLIGHTNYVFCINFN--PQSNRI 115
L + H + LA T + D+P + L T G + N Q +
Sbjct: 262 -VKGECLATYREHSHVVECLAFSTANIIDIP-GSLLSTPEGKSKVKQGPGGNLVGQCGYL 319
Query: 116 VSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
+ + ++TI+IW++ TG+CL H + V A+ F+ G +++ D R+ D
Sbjct: 320 ATGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPCGKFLLSVGDDKTIRVWD 374
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 221 (82.9 bits), Expect = 3.8e-18, P = 3.8e-18
Identities = 62/220 (28%), Positives = 100/220 (45%)
Query: 17 QTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYS------LSSISNFDSTPPSPLQKFT 70
+TL GH +V + F H G+LL S SA+ T+ + + ++ D S
Sbjct: 79 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 138
Query: 71 G-HEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDI 129
G H S TI++W+V T +KT GH +V + N I S + ++T+R+W +
Sbjct: 139 GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 198
Query: 130 KTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLR 189
T +C L H V I + + + S G + P G F+L G+ D T++
Sbjct: 199 ATKECKAELREHEHVVECISWAPESSYSSISEATGS-ETKKSGKP-GPFLLSGSRDKTIK 256
Query: 190 LWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRD 229
+W+ ST L T G+ N + + GK+I+S D
Sbjct: 257 MWDVSTGMCLMTLVGHDN---WVRGVLFHSGGKFILSCAD 293
Score = 183 (69.5 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 34/88 (38%), Positives = 54/88 (61%)
Query: 81 TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPA 140
TI++WDV T L TL+GH N+V + F+ I+S ++T+R+WD K +C+K L A
Sbjct: 254 TIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA 313
Query: 141 HSDPVTAIDFNRDGTMIVTSSYDGLYRI 168
H VT++DF++ +VT S D ++
Sbjct: 314 HEHFVTSLDFHKTAPYVVTGSVDQTVKV 341
Score = 170 (64.9 bits), Expect = 7.6e-11, P = 7.6e-11
Identities = 45/167 (26%), Positives = 84/167 (50%)
Query: 19 LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDST---PPSPLQKFTGHEQG 75
L+GH V+ V F ++ S+S + T+ + + +F+ T +Q + G
Sbjct: 39 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYET-GDFERTLKGHTDSVQDISFDHSG 97
Query: 76 --ISDLA---TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIK 130
++ + TI+LWD ++T+ GH + V + P + IVS + ++TI++W+++
Sbjct: 98 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 157
Query: 131 TGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGK 177
TG C+K H + V + N+DGT+I + S D R+ +T K
Sbjct: 158 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK 204
Score = 138 (53.6 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 49/182 (26%), Positives = 83/182 (45%)
Query: 85 WDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDP 144
W +P L GH + V + F+P + +VS + + TI++WD +TG + L H+D
Sbjct: 29 W-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS 87
Query: 145 VTAIDFNRDGTMIVTSSYDGLYRILDAS------TPNG---KFILVGTLDNTLRLWNYST 195
V I F+ G ++ + S D ++ D T +G V + N + + S
Sbjct: 88 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASR 147
Query: 196 RKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDNDRTMK 255
K +K + T YC+ TF+ HR+ V V + +IAS ND+T++
Sbjct: 148 DKTIKMWEVQTG--YCVK-TFT--------GHREWVRMVRPNQDGTLIAS--CSNDQTVR 194
Query: 256 IW 257
+W
Sbjct: 195 VW 196
Score = 135 (52.6 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 61/239 (25%), Positives = 112/239 (46%)
Query: 2 SSDRSLE--SFRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS---IS 56
S+D +++ F+ + +T++GH VS V +G + S+S +KT+ + + + +
Sbjct: 104 SADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVK 163
Query: 57 NFDSTPPSPLQKFTGHEQGI-----SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQ 111
F ++ ++ G S+ T+R+W V T L H + V CI++ P+
Sbjct: 164 TFTGHREW-VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 222
Query: 112 SN-RIVSD-TFNETIRIWDIKTGKCLKVLPAHSDPVTAI-DFNRDGTMIVTSSYDGLYR- 167
S+ +S+ T +ET + K G L L D + D + ++ +D R
Sbjct: 223 SSYSSISEATGSETKKSG--KPGPFL--LSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRG 278
Query: 168 ILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVS 226
+L S GKFIL D TLR+W+Y ++ +KT + + + + S F T Y+V+
Sbjct: 279 VLFHS--GGKFILSCADDKTLRVWDYKNKRCMKTLNAHEH--FVTSLDFHKT-APYVVT 332
>CGD|CAL0005013 [details] [associations]
symbol:SWD3 species:5476 "Candida albicans" [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0042800 "histone
methyltransferase activity (H3-K4 specific)" evidence=IEA]
[GO:0051568 "histone H3-K4 methylation" evidence=IEA] [GO:0006348
"chromatin silencing at telomere" evidence=IEA] [GO:0000723
"telomere maintenance" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0005013 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000155
RefSeq:XP_712497.1 ProteinModelPortal:Q59S83 STRING:Q59S83
GeneID:3645890 KEGG:cal:CaO19.3457 Uniprot:Q59S83
Length = 383
Score = 222 (83.2 bits), Expect = 5.4e-18, P = 5.4e-18
Identities = 61/191 (31%), Positives = 97/191 (50%)
Query: 1 MSSDRSLESFRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDS 60
+SSD ++ Y + T+N + +KFS +G+ SS+ + Y+ +
Sbjct: 6 LSSD--IQESDLYKIRYTINEPSITFTAIKFSPNGQNFACSSSNGKIYIYN--------T 55
Query: 61 TPPSPLQKFTGHEQGISDLA----------------TIRLWDVPTATSLKTLIGHTNYVF 104
T + +GH +GISD+ TIRLW++ +K L HT ++
Sbjct: 56 TTGKLITTLSGHTKGISDIVYSPINSNILASCSDDLTIRLWNITQQRCIKLLRKHTYHIT 115
Query: 105 CINFNPQSNRIVSDTFNETIRIWDIKT--GKCLKVLPAHSDPVTAIDFNRDGTMIVTSSY 162
+ F + N ++S + +ETI IWDI + GK L L AHSDPV++I D ++IV++SY
Sbjct: 116 TLKFTQKGNILISGSSDETITIWDITSNGGKILTTLAAHSDPVSSIALTPDDSIIVSASY 175
Query: 163 DGLYRILDAST 173
DGL R+ D T
Sbjct: 176 DGLMRLFDLQT 186
Score = 216 (81.1 bits), Expect = 2.6e-17, P = 2.6e-17
Identities = 68/210 (32%), Positives = 105/210 (50%)
Query: 15 LTQTLNGHLRAVSYVKFSH-DGRLLTSSSAEKTLLTYSLSS---ISNFDS-TPPSPLQKF 69
L TL+GH + +S + +S + +L S S + T+ ++++ I T KF
Sbjct: 60 LITTLSGHTKGISDIVYSPINSNILASCSDDLTIRLWNITQQRCIKLLRKHTYHITTLKF 119
Query: 70 T--GHE--QGISDLATIRLWDVPT--ATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNET 123
T G+ G SD TI +WD+ + L TL H++ V I P + IVS +++
Sbjct: 120 TQKGNILISGSSD-ETITIWDITSNGGKILTTLAAHSDPVSSIALTPDDSIIVSASYDGL 178
Query: 124 IRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGL-YRILDAS-TPNGKFILV 181
+R++D++T +CLK L T F GT S+ D + + I +PNG+FIL
Sbjct: 179 MRLFDLQTSQCLKTL-------TNSTFGGHGTA-TASTNDVINFPIAKVELSPNGQFILN 230
Query: 182 GTLDNTLRLWNYSTRKILKTYSGYTNSKYC 211
+LD +RLWNY K+ KTY G K C
Sbjct: 231 SSLDGKIRLWNYMENKVYKTYQGINGEKIC 260
Score = 144 (55.7 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 41/147 (27%), Positives = 74/147 (50%)
Query: 37 LLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGHEQGI---SDLATIRLWDVPTATSL 93
+L+S E L Y + N S + + KF+ + Q S I +++ T +
Sbjct: 5 ILSSDIQESDL--YKIRYTINEPSITFTAI-KFSPNGQNFACSSSNGKIYIYNTTTGKLI 61
Query: 94 KTLIGHTNYVFCINFNP-QSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNR 152
TL GHT + I ++P SN + S + + TIR+W+I +C+K+L H+ +T + F +
Sbjct: 62 TTLSGHTKGISDIVYSPINSNILASCSDDLTIRLWNITQQRCIKLLRKHTYHITTLKFTQ 121
Query: 153 DGTMIVTSSYDGLYRILDASTPNGKFI 179
G ++++ S D I D ++ GK +
Sbjct: 122 KGNILISGSSDETITIWDITSNGGKIL 148
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 222 (83.2 bits), Expect = 7.2e-18, P = 7.2e-18
Identities = 62/220 (28%), Positives = 100/220 (45%)
Query: 17 QTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYS------LSSISNFDSTPPSPLQKFT 70
+TL GH +V + F H G+LL S SA+ T+ + + ++ D S
Sbjct: 144 RTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 71 G-HEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDI 129
G H S TI++W+V T +KT GH +V + N I S + ++T+R+W +
Sbjct: 204 GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 263
Query: 130 KTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLR 189
T +C L H V I + + + S G + P G F+L G+ D T++
Sbjct: 264 ATKECKAELREHEHVVECISWAPESSYSTISEATGS-ETKKSGKP-GPFLLSGSRDKTIK 321
Query: 190 LWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRD 229
+W+ ST L T G+ N + + GK+I+S D
Sbjct: 322 MWDISTGMCLMTLVGHDN---WVRGVLFHSGGKFILSCAD 358
Score = 183 (69.5 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 33/88 (37%), Positives = 54/88 (61%)
Query: 81 TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPA 140
TI++WD+ T L TL+GH N+V + F+ I+S ++T+R+WD K +C+K L A
Sbjct: 319 TIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDFKNKRCMKTLNA 378
Query: 141 HSDPVTAIDFNRDGTMIVTSSYDGLYRI 168
H VT++DF++ +VT S D ++
Sbjct: 379 HEHFVTSLDFHKTAPYVVTGSVDQTVKV 406
Score = 169 (64.5 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 51/171 (29%), Positives = 86/171 (50%)
Query: 19 LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGHEQGIS- 77
L+GH V+ V F ++ S+S + T+ + + +F+ T L+ T Q IS
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYET-GDFERT----LKGHTDSVQDISF 158
Query: 78 D-----LA------TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRI 126
D LA TI+LWD ++T+ GH + V + P + IVS + ++TI++
Sbjct: 159 DHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKM 218
Query: 127 WDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGK 177
W+++TG C+K H + V + N+DGT+I + S D R+ +T K
Sbjct: 219 WEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK 269
Score = 137 (53.3 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 49/182 (26%), Positives = 83/182 (45%)
Query: 85 WDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDP 144
W +P L GH + V + F+P + +VS + + TI++WD +TG + L H+D
Sbjct: 94 W-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS 152
Query: 145 VTAIDFNRDGTMIVTSSYDGLYRILDAS------TPNG---KFILVGTLDNTLRLWNYST 195
V I F+ G ++ + S D ++ D T +G V + N + + S
Sbjct: 153 VQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212
Query: 196 RKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDNDRTMK 255
K +K + T YC+ TF+ HR+ V V + +IAS ND+T++
Sbjct: 213 DKTIKMWEVQTG--YCVK-TFT--------GHREWVRMVRPNQDGTLIAS--CSNDQTVR 259
Query: 256 IW 257
+W
Sbjct: 260 VW 261
Score = 133 (51.9 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 59/238 (24%), Positives = 110/238 (46%)
Query: 2 SSDRSLE--SFRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS---IS 56
S+D +++ F+ + +T++GH VS V +G + S+S +KT+ + + + +
Sbjct: 169 SADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVK 228
Query: 57 NFDSTPPSPLQKFTGHEQGI-----SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQ 111
F ++ ++ G S+ T+R+W V T L H + V CI++ P+
Sbjct: 229 TFTGHREW-VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Query: 112 SNRIVSDTFNETIRIWDIKTGKCLKVLPAHS-DPVTAI-DFNRDGTMIVTSSYDGLYR-I 168
S+ T +E K+GK L + S D + D + ++ +D R +
Sbjct: 288 SSY---STISEATGSETKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGV 344
Query: 169 LDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVS 226
L S GKFIL D TLR+W++ ++ +KT + + + + S F T Y+V+
Sbjct: 345 LFHS--GGKFILSCADDKTLRVWDFKNKRCMKTLNAHEH--FVTSLDFHKT-APYVVT 397
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 221 (82.9 bits), Expect = 9.3e-18, P = 9.3e-18
Identities = 62/220 (28%), Positives = 100/220 (45%)
Query: 17 QTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYS------LSSISNFDSTPPSPLQKFT 70
+TL GH +V + F H G+LL S SA+ T+ + + ++ D S
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 71 G-HEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDI 129
G H S TI++W+V T +KT GH +V + N I S + ++T+R+W +
Sbjct: 204 GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 263
Query: 130 KTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLR 189
T +C L H V I + + + S G + P G F+L G+ D T++
Sbjct: 264 ATKECKAELREHEHVVECISWAPESSYSSISEATGS-ETKKSGKP-GPFLLSGSRDKTIK 321
Query: 190 LWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRD 229
+W+ ST L T G+ N + + GK+I+S D
Sbjct: 322 MWDVSTGMCLMTLVGHDN---WVRGVLFHSGGKFILSCAD 358
Score = 183 (69.5 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 34/88 (38%), Positives = 54/88 (61%)
Query: 81 TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPA 140
TI++WDV T L TL+GH N+V + F+ I+S ++T+R+WD K +C+K L A
Sbjct: 319 TIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA 378
Query: 141 HSDPVTAIDFNRDGTMIVTSSYDGLYRI 168
H VT++DF++ +VT S D ++
Sbjct: 379 HEHFVTSLDFHKTAPYVVTGSVDQTVKV 406
Score = 170 (64.9 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 45/167 (26%), Positives = 84/167 (50%)
Query: 19 LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDST---PPSPLQKFTGHEQG 75
L+GH V+ V F ++ S+S + T+ + + +F+ T +Q + G
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYET-GDFERTLKGHTDSVQDISFDHSG 162
Query: 76 --ISDLA---TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIK 130
++ + TI+LWD ++T+ GH + V + P + IVS + ++TI++W+++
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
Query: 131 TGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGK 177
TG C+K H + V + N+DGT+I + S D R+ +T K
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK 269
Score = 138 (53.6 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 49/182 (26%), Positives = 83/182 (45%)
Query: 85 WDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDP 144
W +P L GH + V + F+P + +VS + + TI++WD +TG + L H+D
Sbjct: 94 W-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS 152
Query: 145 VTAIDFNRDGTMIVTSSYDGLYRILDAS------TPNG---KFILVGTLDNTLRLWNYST 195
V I F+ G ++ + S D ++ D T +G V + N + + S
Sbjct: 153 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212
Query: 196 RKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDNDRTMK 255
K +K + T YC+ TF+ HR+ V V + +IAS ND+T++
Sbjct: 213 DKTIKMWEVQTG--YCVK-TFT--------GHREWVRMVRPNQDGTLIAS--CSNDQTVR 259
Query: 256 IW 257
+W
Sbjct: 260 VW 261
Score = 135 (52.6 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 61/239 (25%), Positives = 112/239 (46%)
Query: 2 SSDRSLE--SFRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS---IS 56
S+D +++ F+ + +T++GH VS V +G + S+S +KT+ + + + +
Sbjct: 169 SADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVK 228
Query: 57 NFDSTPPSPLQKFTGHEQGI-----SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQ 111
F ++ ++ G S+ T+R+W V T L H + V CI++ P+
Sbjct: 229 TFTGHREW-VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Query: 112 SN-RIVSD-TFNETIRIWDIKTGKCLKVLPAHSDPVTAI-DFNRDGTMIVTSSYDGLYR- 167
S+ +S+ T +ET + K G L L D + D + ++ +D R
Sbjct: 288 SSYSSISEATGSETKKSG--KPGPFL--LSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRG 343
Query: 168 ILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVS 226
+L S GKFIL D TLR+W+Y ++ +KT + + + + S F T Y+V+
Sbjct: 344 VLFHS--GGKFILSCADDKTLRVWDYKNKRCMKTLNAHEH--FVTSLDFHKT-APYVVT 397
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 221 (82.9 bits), Expect = 9.3e-18, P = 9.3e-18
Identities = 62/220 (28%), Positives = 100/220 (45%)
Query: 17 QTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYS------LSSISNFDSTPPSPLQKFT 70
+TL GH +V + F H G+LL S SA+ T+ + + ++ D S
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 71 G-HEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDI 129
G H S TI++W+V T +KT GH +V + N I S + ++T+R+W +
Sbjct: 204 GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 263
Query: 130 KTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLR 189
T +C L H V I + + + S G + P G F+L G+ D T++
Sbjct: 264 ATKECKAELREHEHVVECISWAPESSYSSISEATGS-ETKKSGKP-GPFLLSGSRDKTIK 321
Query: 190 LWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRD 229
+W+ ST L T G+ N + + GK+I+S D
Sbjct: 322 MWDVSTGMCLMTLVGHDN---WVRGVLFHSGGKFILSCAD 358
Score = 183 (69.5 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 34/88 (38%), Positives = 54/88 (61%)
Query: 81 TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPA 140
TI++WDV T L TL+GH N+V + F+ I+S ++T+R+WD K +C+K L A
Sbjct: 319 TIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA 378
Query: 141 HSDPVTAIDFNRDGTMIVTSSYDGLYRI 168
H VT++DF++ +VT S D ++
Sbjct: 379 HEHFVTSLDFHKTAPYVVTGSVDQTVKV 406
Score = 170 (64.9 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 45/167 (26%), Positives = 84/167 (50%)
Query: 19 LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDST---PPSPLQKFTGHEQG 75
L+GH V+ V F ++ S+S + T+ + + +F+ T +Q + G
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYET-GDFERTLKGHTDSVQDISFDHSG 162
Query: 76 --ISDLA---TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIK 130
++ + TI+LWD ++T+ GH + V + P + IVS + ++TI++W+++
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
Query: 131 TGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGK 177
TG C+K H + V + N+DGT+I + S D R+ +T K
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK 269
Score = 138 (53.6 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 49/182 (26%), Positives = 83/182 (45%)
Query: 85 WDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDP 144
W +P L GH + V + F+P + +VS + + TI++WD +TG + L H+D
Sbjct: 94 W-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS 152
Query: 145 VTAIDFNRDGTMIVTSSYDGLYRILDAS------TPNG---KFILVGTLDNTLRLWNYST 195
V I F+ G ++ + S D ++ D T +G V + N + + S
Sbjct: 153 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212
Query: 196 RKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDNDRTMK 255
K +K + T YC+ TF+ HR+ V V + +IAS ND+T++
Sbjct: 213 DKTIKMWEVQTG--YCVK-TFT--------GHREWVRMVRPNQDGTLIAS--CSNDQTVR 259
Query: 256 IW 257
+W
Sbjct: 260 VW 261
Score = 135 (52.6 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 61/239 (25%), Positives = 112/239 (46%)
Query: 2 SSDRSLE--SFRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS---IS 56
S+D +++ F+ + +T++GH VS V +G + S+S +KT+ + + + +
Sbjct: 169 SADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVK 228
Query: 57 NFDSTPPSPLQKFTGHEQGI-----SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQ 111
F ++ ++ G S+ T+R+W V T L H + V CI++ P+
Sbjct: 229 TFTGHREW-VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Query: 112 SN-RIVSD-TFNETIRIWDIKTGKCLKVLPAHSDPVTAI-DFNRDGTMIVTSSYDGLYR- 167
S+ +S+ T +ET + K G L L D + D + ++ +D R
Sbjct: 288 SSYSSISEATGSETKKSG--KPGPFL--LSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRG 343
Query: 168 ILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVS 226
+L S GKFIL D TLR+W+Y ++ +KT + + + + S F T Y+V+
Sbjct: 344 VLFHS--GGKFILSCADDKTLRVWDYKNKRCMKTLNAHEH--FVTSLDFHKT-APYVVT 397
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 221 (82.9 bits), Expect = 9.3e-18, P = 9.3e-18
Identities = 62/220 (28%), Positives = 100/220 (45%)
Query: 17 QTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYS------LSSISNFDSTPPSPLQKFT 70
+TL GH +V + F H G+LL S SA+ T+ + + ++ D S
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 71 G-HEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDI 129
G H S TI++W+V T +KT GH +V + N I S + ++T+R+W +
Sbjct: 204 GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 263
Query: 130 KTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLR 189
T +C L H V I + + + S G + P G F+L G+ D T++
Sbjct: 264 ATKECKAELREHEHVVECISWAPESSYSSISEATGS-ETKKSGKP-GPFLLSGSRDKTIK 321
Query: 190 LWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRD 229
+W+ ST L T G+ N + + GK+I+S D
Sbjct: 322 MWDVSTGMCLMTLVGHDN---WVRGVLFHSGGKFILSCAD 358
Score = 183 (69.5 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 34/88 (38%), Positives = 54/88 (61%)
Query: 81 TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPA 140
TI++WDV T L TL+GH N+V + F+ I+S ++T+R+WD K +C+K L A
Sbjct: 319 TIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA 378
Query: 141 HSDPVTAIDFNRDGTMIVTSSYDGLYRI 168
H VT++DF++ +VT S D ++
Sbjct: 379 HEHFVTSLDFHKTAPYVVTGSVDQTVKV 406
Score = 170 (64.9 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 45/167 (26%), Positives = 84/167 (50%)
Query: 19 LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDST---PPSPLQKFTGHEQG 75
L+GH V+ V F ++ S+S + T+ + + +F+ T +Q + G
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYET-GDFERTLKGHTDSVQDISFDHSG 162
Query: 76 --ISDLA---TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIK 130
++ + TI+LWD ++T+ GH + V + P + IVS + ++TI++W+++
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
Query: 131 TGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGK 177
TG C+K H + V + N+DGT+I + S D R+ +T K
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK 269
Score = 138 (53.6 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 49/182 (26%), Positives = 83/182 (45%)
Query: 85 WDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDP 144
W +P L GH + V + F+P + +VS + + TI++WD +TG + L H+D
Sbjct: 94 W-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS 152
Query: 145 VTAIDFNRDGTMIVTSSYDGLYRILDAS------TPNG---KFILVGTLDNTLRLWNYST 195
V I F+ G ++ + S D ++ D T +G V + N + + S
Sbjct: 153 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212
Query: 196 RKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDNDRTMK 255
K +K + T YC+ TF+ HR+ V V + +IAS ND+T++
Sbjct: 213 DKTIKMWEVQTG--YCVK-TFT--------GHREWVRMVRPNQDGTLIAS--CSNDQTVR 259
Query: 256 IW 257
+W
Sbjct: 260 VW 261
Score = 135 (52.6 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 61/239 (25%), Positives = 112/239 (46%)
Query: 2 SSDRSLE--SFRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS---IS 56
S+D +++ F+ + +T++GH VS V +G + S+S +KT+ + + + +
Sbjct: 169 SADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVK 228
Query: 57 NFDSTPPSPLQKFTGHEQGI-----SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQ 111
F ++ ++ G S+ T+R+W V T L H + V CI++ P+
Sbjct: 229 TFTGHREW-VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Query: 112 SN-RIVSD-TFNETIRIWDIKTGKCLKVLPAHSDPVTAI-DFNRDGTMIVTSSYDGLYR- 167
S+ +S+ T +ET + K G L L D + D + ++ +D R
Sbjct: 288 SSYSSISEATGSETKKSG--KPGPFL--LSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRG 343
Query: 168 ILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVS 226
+L S GKFIL D TLR+W+Y ++ +KT + + + + S F T Y+V+
Sbjct: 344 VLFHS--GGKFILSCADDKTLRVWDYKNKRCMKTLNAHEH--FVTSLDFHKT-APYVVT 397
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 221 (82.9 bits), Expect = 9.3e-18, P = 9.3e-18
Identities = 62/220 (28%), Positives = 100/220 (45%)
Query: 17 QTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYS------LSSISNFDSTPPSPLQKFT 70
+TL GH +V + F H G+LL S SA+ T+ + + ++ D S
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 71 G-HEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDI 129
G H S TI++W+V T +KT GH +V + N I S + ++T+R+W +
Sbjct: 204 GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 263
Query: 130 KTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLR 189
T +C L H V I + + + S G + P G F+L G+ D T++
Sbjct: 264 ATKECKAELREHEHVVECISWAPESSYSSISEATGS-ETKKSGKP-GPFLLSGSRDKTIK 321
Query: 190 LWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRD 229
+W+ ST L T G+ N + + GK+I+S D
Sbjct: 322 MWDVSTGMCLMTLVGHDN---WVRGVLFHSGGKFILSCAD 358
Score = 183 (69.5 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 34/88 (38%), Positives = 54/88 (61%)
Query: 81 TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPA 140
TI++WDV T L TL+GH N+V + F+ I+S ++T+R+WD K +C+K L A
Sbjct: 319 TIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA 378
Query: 141 HSDPVTAIDFNRDGTMIVTSSYDGLYRI 168
H VT++DF++ +VT S D ++
Sbjct: 379 HEHFVTSLDFHKTAPYVVTGSVDQTVKV 406
Score = 170 (64.9 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 45/167 (26%), Positives = 84/167 (50%)
Query: 19 LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDST---PPSPLQKFTGHEQG 75
L+GH V+ V F ++ S+S + T+ + + +F+ T +Q + G
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYET-GDFERTLKGHTDSVQDISFDHSG 162
Query: 76 --ISDLA---TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIK 130
++ + TI+LWD ++T+ GH + V + P + IVS + ++TI++W+++
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
Query: 131 TGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGK 177
TG C+K H + V + N+DGT+I + S D R+ +T K
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK 269
Score = 138 (53.6 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 49/182 (26%), Positives = 83/182 (45%)
Query: 85 WDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDP 144
W +P L GH + V + F+P + +VS + + TI++WD +TG + L H+D
Sbjct: 94 W-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS 152
Query: 145 VTAIDFNRDGTMIVTSSYDGLYRILDAS------TPNG---KFILVGTLDNTLRLWNYST 195
V I F+ G ++ + S D ++ D T +G V + N + + S
Sbjct: 153 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212
Query: 196 RKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDNDRTMK 255
K +K + T YC+ TF+ HR+ V V + +IAS ND+T++
Sbjct: 213 DKTIKMWEVQTG--YCVK-TFT--------GHREWVRMVRPNQDGTLIAS--CSNDQTVR 259
Query: 256 IW 257
+W
Sbjct: 260 VW 261
Score = 135 (52.6 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 61/239 (25%), Positives = 112/239 (46%)
Query: 2 SSDRSLE--SFRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS---IS 56
S+D +++ F+ + +T++GH VS V +G + S+S +KT+ + + + +
Sbjct: 169 SADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVK 228
Query: 57 NFDSTPPSPLQKFTGHEQGI-----SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQ 111
F ++ ++ G S+ T+R+W V T L H + V CI++ P+
Sbjct: 229 TFTGHREW-VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Query: 112 SN-RIVSD-TFNETIRIWDIKTGKCLKVLPAHSDPVTAI-DFNRDGTMIVTSSYDGLYR- 167
S+ +S+ T +ET + K G L L D + D + ++ +D R
Sbjct: 288 SSYSSISEATGSETKKSG--KPGPFL--LSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRG 343
Query: 168 ILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVS 226
+L S GKFIL D TLR+W+Y ++ +KT + + + + S F T Y+V+
Sbjct: 344 VLFHS--GGKFILSCADDKTLRVWDYKNKRCMKTLNAHEH--FVTSLDFHKT-APYVVT 397
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 221 (82.9 bits), Expect = 9.3e-18, P = 9.3e-18
Identities = 62/220 (28%), Positives = 100/220 (45%)
Query: 17 QTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYS------LSSISNFDSTPPSPLQKFT 70
+TL GH +V + F H G+LL S SA+ T+ + + ++ D S
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 71 G-HEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDI 129
G H S TI++W+V T +KT GH +V + N I S + ++T+R+W +
Sbjct: 204 GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 263
Query: 130 KTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLR 189
T +C L H V I + + + S G + P G F+L G+ D T++
Sbjct: 264 ATKECKAELREHEHVVECISWAPESSYSSISEATGS-ETKKSGKP-GPFLLSGSRDKTIK 321
Query: 190 LWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRD 229
+W+ ST L T G+ N + + GK+I+S D
Sbjct: 322 MWDVSTGMCLMTLVGHDN---WVRGVLFHSGGKFILSCAD 358
Score = 183 (69.5 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 34/88 (38%), Positives = 54/88 (61%)
Query: 81 TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPA 140
TI++WDV T L TL+GH N+V + F+ I+S ++T+R+WD K +C+K L A
Sbjct: 319 TIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA 378
Query: 141 HSDPVTAIDFNRDGTMIVTSSYDGLYRI 168
H VT++DF++ +VT S D ++
Sbjct: 379 HEHFVTSLDFHKTAPYVVTGSVDQTVKV 406
Score = 170 (64.9 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 45/167 (26%), Positives = 84/167 (50%)
Query: 19 LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDST---PPSPLQKFTGHEQG 75
L+GH V+ V F ++ S+S + T+ + + +F+ T +Q + G
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYET-GDFERTLKGHTDSVQDISFDHSG 162
Query: 76 --ISDLA---TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIK 130
++ + TI+LWD ++T+ GH + V + P + IVS + ++TI++W+++
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
Query: 131 TGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGK 177
TG C+K H + V + N+DGT+I + S D R+ +T K
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK 269
Score = 138 (53.6 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 49/182 (26%), Positives = 83/182 (45%)
Query: 85 WDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDP 144
W +P L GH + V + F+P + +VS + + TI++WD +TG + L H+D
Sbjct: 94 W-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS 152
Query: 145 VTAIDFNRDGTMIVTSSYDGLYRILDAS------TPNG---KFILVGTLDNTLRLWNYST 195
V I F+ G ++ + S D ++ D T +G V + N + + S
Sbjct: 153 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212
Query: 196 RKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDNDRTMK 255
K +K + T YC+ TF+ HR+ V V + +IAS ND+T++
Sbjct: 213 DKTIKMWEVQTG--YCVK-TFT--------GHREWVRMVRPNQDGTLIAS--CSNDQTVR 259
Query: 256 IW 257
+W
Sbjct: 260 VW 261
Score = 135 (52.6 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 61/239 (25%), Positives = 112/239 (46%)
Query: 2 SSDRSLE--SFRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS---IS 56
S+D +++ F+ + +T++GH VS V +G + S+S +KT+ + + + +
Sbjct: 169 SADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVK 228
Query: 57 NFDSTPPSPLQKFTGHEQGI-----SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQ 111
F ++ ++ G S+ T+R+W V T L H + V CI++ P+
Sbjct: 229 TFTGHREW-VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Query: 112 SN-RIVSD-TFNETIRIWDIKTGKCLKVLPAHSDPVTAI-DFNRDGTMIVTSSYDGLYR- 167
S+ +S+ T +ET + K G L L D + D + ++ +D R
Sbjct: 288 SSYSSISEATGSETKKSG--KPGPFL--LSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRG 343
Query: 168 ILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVS 226
+L S GKFIL D TLR+W+Y ++ +KT + + + + S F T Y+V+
Sbjct: 344 VLFHS--GGKFILSCADDKTLRVWDYKNKRCMKTLNAHEH--FVTSLDFHKT-APYVVT 397
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 221 (82.9 bits), Expect = 9.3e-18, P = 9.3e-18
Identities = 62/220 (28%), Positives = 100/220 (45%)
Query: 17 QTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYS------LSSISNFDSTPPSPLQKFT 70
+TL GH +V + F H G+LL S SA+ T+ + + ++ D S
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 71 G-HEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDI 129
G H S TI++W+V T +KT GH +V + N I S + ++T+R+W +
Sbjct: 204 GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 263
Query: 130 KTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLR 189
T +C L H V I + + + S G + P G F+L G+ D T++
Sbjct: 264 ATKECKAELREHEHVVECISWAPESSYSSISEATGS-ETKKSGKP-GPFLLSGSRDKTIK 321
Query: 190 LWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRD 229
+W+ ST L T G+ N + + GK+I+S D
Sbjct: 322 MWDVSTGMCLMTLVGHDN---WVRGVLFHSGGKFILSCAD 358
Score = 183 (69.5 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 34/88 (38%), Positives = 54/88 (61%)
Query: 81 TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPA 140
TI++WDV T L TL+GH N+V + F+ I+S ++T+R+WD K +C+K L A
Sbjct: 319 TIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA 378
Query: 141 HSDPVTAIDFNRDGTMIVTSSYDGLYRI 168
H VT++DF++ +VT S D ++
Sbjct: 379 HEHFVTSLDFHKTAPYVVTGSVDQTVKV 406
Score = 170 (64.9 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 45/167 (26%), Positives = 84/167 (50%)
Query: 19 LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDST---PPSPLQKFTGHEQG 75
L+GH V+ V F ++ S+S + T+ + + +F+ T +Q + G
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYET-GDFERTLKGHTDSVQDISFDHSG 162
Query: 76 --ISDLA---TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIK 130
++ + TI+LWD ++T+ GH + V + P + IVS + ++TI++W+++
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
Query: 131 TGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGK 177
TG C+K H + V + N+DGT+I + S D R+ +T K
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK 269
Score = 138 (53.6 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 49/182 (26%), Positives = 83/182 (45%)
Query: 85 WDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDP 144
W +P L GH + V + F+P + +VS + + TI++WD +TG + L H+D
Sbjct: 94 W-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS 152
Query: 145 VTAIDFNRDGTMIVTSSYDGLYRILDAS------TPNG---KFILVGTLDNTLRLWNYST 195
V I F+ G ++ + S D ++ D T +G V + N + + S
Sbjct: 153 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212
Query: 196 RKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDNDRTMK 255
K +K + T YC+ TF+ HR+ V V + +IAS ND+T++
Sbjct: 213 DKTIKMWEVQTG--YCVK-TFT--------GHREWVRMVRPNQDGTLIAS--CSNDQTVR 259
Query: 256 IW 257
+W
Sbjct: 260 VW 261
Score = 135 (52.6 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 61/239 (25%), Positives = 112/239 (46%)
Query: 2 SSDRSLE--SFRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS---IS 56
S+D +++ F+ + +T++GH VS V +G + S+S +KT+ + + + +
Sbjct: 169 SADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVK 228
Query: 57 NFDSTPPSPLQKFTGHEQGI-----SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQ 111
F ++ ++ G S+ T+R+W V T L H + V CI++ P+
Sbjct: 229 TFTGHREW-VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Query: 112 SN-RIVSD-TFNETIRIWDIKTGKCLKVLPAHSDPVTAI-DFNRDGTMIVTSSYDGLYR- 167
S+ +S+ T +ET + K G L L D + D + ++ +D R
Sbjct: 288 SSYSSISEATGSETKKSG--KPGPFL--LSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRG 343
Query: 168 ILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVS 226
+L S GKFIL D TLR+W+Y ++ +KT + + + + S F T Y+V+
Sbjct: 344 VLFHS--GGKFILSCADDKTLRVWDYKNKRCMKTLNAHEH--FVTSLDFHKT-APYVVT 397
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 221 (82.9 bits), Expect = 9.3e-18, P = 9.3e-18
Identities = 62/220 (28%), Positives = 100/220 (45%)
Query: 17 QTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYS------LSSISNFDSTPPSPLQKFT 70
+TL GH +V + F H G+LL S SA+ T+ + + ++ D S
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 71 G-HEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDI 129
G H S TI++W+V T +KT GH +V + N I S + ++T+R+W +
Sbjct: 204 GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 263
Query: 130 KTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLR 189
T +C L H V I + + + S G + P G F+L G+ D T++
Sbjct: 264 ATKECKAELREHEHVVECISWAPESSYSSISEATGS-ETKKSGKP-GPFLLSGSRDKTIK 321
Query: 190 LWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRD 229
+W+ ST L T G+ N + + GK+I+S D
Sbjct: 322 MWDVSTGMCLMTLVGHDN---WVRGVLFHSGGKFILSCAD 358
Score = 183 (69.5 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 34/88 (38%), Positives = 54/88 (61%)
Query: 81 TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPA 140
TI++WDV T L TL+GH N+V + F+ I+S ++T+R+WD K +C+K L A
Sbjct: 319 TIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA 378
Query: 141 HSDPVTAIDFNRDGTMIVTSSYDGLYRI 168
H VT++DF++ +VT S D ++
Sbjct: 379 HEHFVTSLDFHKTAPYVVTGSVDQTVKV 406
Score = 170 (64.9 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 45/167 (26%), Positives = 84/167 (50%)
Query: 19 LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDST---PPSPLQKFTGHEQG 75
L+GH V+ V F ++ S+S + T+ + + +F+ T +Q + G
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYET-GDFERTLKGHTDSVQDISFDHSG 162
Query: 76 --ISDLA---TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIK 130
++ + TI+LWD ++T+ GH + V + P + IVS + ++TI++W+++
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
Query: 131 TGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGK 177
TG C+K H + V + N+DGT+I + S D R+ +T K
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK 269
Score = 138 (53.6 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 49/182 (26%), Positives = 83/182 (45%)
Query: 85 WDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDP 144
W +P L GH + V + F+P + +VS + + TI++WD +TG + L H+D
Sbjct: 94 W-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS 152
Query: 145 VTAIDFNRDGTMIVTSSYDGLYRILDAS------TPNG---KFILVGTLDNTLRLWNYST 195
V I F+ G ++ + S D ++ D T +G V + N + + S
Sbjct: 153 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212
Query: 196 RKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDNDRTMK 255
K +K + T YC+ TF+ HR+ V V + +IAS ND+T++
Sbjct: 213 DKTIKMWEVQTG--YCVK-TFT--------GHREWVRMVRPNQDGTLIAS--CSNDQTVR 259
Query: 256 IW 257
+W
Sbjct: 260 VW 261
Score = 135 (52.6 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 61/239 (25%), Positives = 112/239 (46%)
Query: 2 SSDRSLE--SFRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS---IS 56
S+D +++ F+ + +T++GH VS V +G + S+S +KT+ + + + +
Sbjct: 169 SADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVK 228
Query: 57 NFDSTPPSPLQKFTGHEQGI-----SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQ 111
F ++ ++ G S+ T+R+W V T L H + V CI++ P+
Sbjct: 229 TFTGHREW-VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Query: 112 SN-RIVSD-TFNETIRIWDIKTGKCLKVLPAHSDPVTAI-DFNRDGTMIVTSSYDGLYR- 167
S+ +S+ T +ET + K G L L D + D + ++ +D R
Sbjct: 288 SSYSSISEATGSETKKSG--KPGPFL--LSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRG 343
Query: 168 ILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVS 226
+L S GKFIL D TLR+W+Y ++ +KT + + + + S F T Y+V+
Sbjct: 344 VLFHS--GGKFILSCADDKTLRVWDYKNKRCMKTLNAHEH--FVTSLDFHKT-APYVVT 397
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 221 (82.9 bits), Expect = 9.3e-18, P = 9.3e-18
Identities = 62/220 (28%), Positives = 100/220 (45%)
Query: 17 QTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYS------LSSISNFDSTPPSPLQKFT 70
+TL GH +V + F H G+LL S SA+ T+ + + ++ D S
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 71 G-HEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDI 129
G H S TI++W+V T +KT GH +V + N I S + ++T+R+W +
Sbjct: 204 GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 263
Query: 130 KTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLR 189
T +C L H V I + + + S G + P G F+L G+ D T++
Sbjct: 264 ATKECKAELREHEHVVECISWAPESSYSSISEATGS-ETKKSGKP-GPFLLSGSRDKTIK 321
Query: 190 LWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRD 229
+W+ ST L T G+ N + + GK+I+S D
Sbjct: 322 MWDVSTGMCLMTLVGHDN---WVRGVLFHSGGKFILSCAD 358
Score = 183 (69.5 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 34/88 (38%), Positives = 54/88 (61%)
Query: 81 TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPA 140
TI++WDV T L TL+GH N+V + F+ I+S ++T+R+WD K +C+K L A
Sbjct: 319 TIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA 378
Query: 141 HSDPVTAIDFNRDGTMIVTSSYDGLYRI 168
H VT++DF++ +VT S D ++
Sbjct: 379 HEHFVTSLDFHKTAPYVVTGSVDQTVKV 406
Score = 170 (64.9 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 45/167 (26%), Positives = 84/167 (50%)
Query: 19 LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDST---PPSPLQKFTGHEQG 75
L+GH V+ V F ++ S+S + T+ + + +F+ T +Q + G
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYET-GDFERTLKGHTDSVQDISFDHSG 162
Query: 76 --ISDLA---TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIK 130
++ + TI+LWD ++T+ GH + V + P + IVS + ++TI++W+++
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
Query: 131 TGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGK 177
TG C+K H + V + N+DGT+I + S D R+ +T K
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK 269
Score = 138 (53.6 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 49/182 (26%), Positives = 83/182 (45%)
Query: 85 WDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDP 144
W +P L GH + V + F+P + +VS + + TI++WD +TG + L H+D
Sbjct: 94 W-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS 152
Query: 145 VTAIDFNRDGTMIVTSSYDGLYRILDAS------TPNG---KFILVGTLDNTLRLWNYST 195
V I F+ G ++ + S D ++ D T +G V + N + + S
Sbjct: 153 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212
Query: 196 RKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDNDRTMK 255
K +K + T YC+ TF+ HR+ V V + +IAS ND+T++
Sbjct: 213 DKTIKMWEVQTG--YCVK-TFT--------GHREWVRMVRPNQDGTLIAS--CSNDQTVR 259
Query: 256 IW 257
+W
Sbjct: 260 VW 261
Score = 135 (52.6 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 61/239 (25%), Positives = 112/239 (46%)
Query: 2 SSDRSLE--SFRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS---IS 56
S+D +++ F+ + +T++GH VS V +G + S+S +KT+ + + + +
Sbjct: 169 SADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVK 228
Query: 57 NFDSTPPSPLQKFTGHEQGI-----SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQ 111
F ++ ++ G S+ T+R+W V T L H + V CI++ P+
Sbjct: 229 TFTGHREW-VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Query: 112 SN-RIVSD-TFNETIRIWDIKTGKCLKVLPAHSDPVTAI-DFNRDGTMIVTSSYDGLYR- 167
S+ +S+ T +ET + K G L L D + D + ++ +D R
Sbjct: 288 SSYSSISEATGSETKKSG--KPGPFL--LSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRG 343
Query: 168 ILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVS 226
+L S GKFIL D TLR+W+Y ++ +KT + + + + S F T Y+V+
Sbjct: 344 VLFHS--GGKFILSCADDKTLRVWDYKNKRCMKTLNAHEH--FVTSLDFHKT-APYVVT 397
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 221 (82.9 bits), Expect = 9.3e-18, P = 9.3e-18
Identities = 62/220 (28%), Positives = 100/220 (45%)
Query: 17 QTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYS------LSSISNFDSTPPSPLQKFT 70
+TL GH +V + F H G+LL S SA+ T+ + + ++ D S
Sbjct: 144 RTLKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 71 G-HEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDI 129
G H S TI++W+V T +KT GH +V + N I S + ++T+R+W +
Sbjct: 204 GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 263
Query: 130 KTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLR 189
T +C L H V I + + + S G + P G F+L G+ D T++
Sbjct: 264 ATKECKAELREHEHVVECISWAPESSYSSISEATGS-ETKKSGKP-GPFLLSGSRDKTIK 321
Query: 190 LWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRD 229
+W+ ST L T G+ N + + GK+I+S D
Sbjct: 322 MWDVSTGMCLMTLVGHDN---WVRGVLFHSGGKFILSCAD 358
Score = 183 (69.5 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 34/88 (38%), Positives = 54/88 (61%)
Query: 81 TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPA 140
TI++WDV T L TL+GH N+V + F+ I+S ++T+R+WD K +C+K L A
Sbjct: 319 TIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA 378
Query: 141 HSDPVTAIDFNRDGTMIVTSSYDGLYRI 168
H VT++DF++ +VT S D ++
Sbjct: 379 HEHFVTSLDFHKTAPYVVTGSVDQTVKV 406
Score = 167 (63.8 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 44/167 (26%), Positives = 84/167 (50%)
Query: 19 LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDST---PPSPLQKFTGHEQG 75
L+GH V+ V F ++ S+S + T+ + + +F+ T ++ + G
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYET-GDFERTLKGHTDSVEDISFDHSG 162
Query: 76 --ISDLA---TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIK 130
++ + TI+LWD ++T+ GH + V + P + IVS + ++TI++W+++
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
Query: 131 TGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGK 177
TG C+K H + V + N+DGT+I + S D R+ +T K
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK 269
Score = 138 (53.6 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 49/182 (26%), Positives = 83/182 (45%)
Query: 85 WDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDP 144
W +P L GH + V + F+P + +VS + + TI++WD +TG + L H+D
Sbjct: 94 W-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS 152
Query: 145 VTAIDFNRDGTMIVTSSYDGLYRILDAS------TPNG---KFILVGTLDNTLRLWNYST 195
V I F+ G ++ + S D ++ D T +G V + N + + S
Sbjct: 153 VEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212
Query: 196 RKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDNDRTMK 255
K +K + T YC+ TF+ HR+ V V + +IAS ND+T++
Sbjct: 213 DKTIKMWEVQTG--YCVK-TFT--------GHREWVRMVRPNQDGTLIAS--CSNDQTVR 259
Query: 256 IW 257
+W
Sbjct: 260 VW 261
Score = 135 (52.6 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 61/239 (25%), Positives = 112/239 (46%)
Query: 2 SSDRSLE--SFRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS---IS 56
S+D +++ F+ + +T++GH VS V +G + S+S +KT+ + + + +
Sbjct: 169 SADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVK 228
Query: 57 NFDSTPPSPLQKFTGHEQGI-----SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQ 111
F ++ ++ G S+ T+R+W V T L H + V CI++ P+
Sbjct: 229 TFTGHREW-VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Query: 112 SN-RIVSD-TFNETIRIWDIKTGKCLKVLPAHSDPVTAI-DFNRDGTMIVTSSYDGLYR- 167
S+ +S+ T +ET + K G L L D + D + ++ +D R
Sbjct: 288 SSYSSISEATGSETKKSG--KPGPFL--LSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRG 343
Query: 168 ILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVS 226
+L S GKFIL D TLR+W+Y ++ +KT + + + + S F T Y+V+
Sbjct: 344 VLFHS--GGKFILSCADDKTLRVWDYKNKRCMKTLNAHEH--FVTSLDFHKT-APYVVT 397
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 218 (81.8 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 61/220 (27%), Positives = 100/220 (45%)
Query: 17 QTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYS------LSSISNFDSTPPSPLQKFT 70
+TL GH +V + F H G+LL S SA+ T+ + + ++ D S
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 71 G-HEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDI 129
G H + TI++W+V T +KT GH +V + N I S + ++T+R+W +
Sbjct: 204 GDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 263
Query: 130 KTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLR 189
T +C L H V I + + + S G + P G F+L G+ D T++
Sbjct: 264 ATKECKAELREHEHVVECISWAPESSYSSISEATGS-ETKKSGKP-GPFLLSGSRDKTIK 321
Query: 190 LWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRD 229
+W+ ST L T G+ N + + GK+I+S D
Sbjct: 322 MWDVSTGMCLMTLVGHDN---WVRGVLFHSGGKFILSCAD 358
Score = 183 (69.5 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 34/88 (38%), Positives = 54/88 (61%)
Query: 81 TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPA 140
TI++WDV T L TL+GH N+V + F+ I+S ++T+R+WD K +C+K L A
Sbjct: 319 TIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA 378
Query: 141 HSDPVTAIDFNRDGTMIVTSSYDGLYRI 168
H VT++DF++ +VT S D ++
Sbjct: 379 HEHFVTSLDFHKTAPYVVTGSVDQTVKV 406
Score = 169 (64.5 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 45/167 (26%), Positives = 83/167 (49%)
Query: 19 LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDST---PPSPLQKFTGHEQG 75
L+GH V+ V F ++ S+S + T+ + + +F+ T +Q + G
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYET-GDFERTLKGHTDSVQDISFDHSG 162
Query: 76 --ISDLA---TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIK 130
++ + TI+LWD ++T+ GH + V + P + IVS ++TI++W+++
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQ 222
Query: 131 TGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGK 177
TG C+K H + V + N+DGT+I + S D R+ +T K
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK 269
Score = 135 (52.6 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 48/182 (26%), Positives = 83/182 (45%)
Query: 85 WDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDP 144
W +P L GH + V + F+P + +VS + + TI++WD +TG + L H+D
Sbjct: 94 W-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS 152
Query: 145 VTAIDFNRDGTMIVTSSYDGLYRILDAS------TPNG---KFILVGTLDNTLRLWNYST 195
V I F+ G ++ + S D ++ D T +G V + N + + +
Sbjct: 153 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAAR 212
Query: 196 RKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDNDRTMK 255
K +K + T YC+ TF+ HR+ V V + +IAS ND+T++
Sbjct: 213 DKTIKMWEVQTG--YCVK-TFT--------GHREWVRMVRPNQDGTLIAS--CSNDQTVR 259
Query: 256 IW 257
+W
Sbjct: 260 VW 261
Score = 132 (51.5 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 60/239 (25%), Positives = 112/239 (46%)
Query: 2 SSDRSLE--SFRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS---IS 56
S+D +++ F+ + +T++GH VS V +G + S++ +KT+ + + + +
Sbjct: 169 SADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVK 228
Query: 57 NFDSTPPSPLQKFTGHEQGI-----SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQ 111
F ++ ++ G S+ T+R+W V T L H + V CI++ P+
Sbjct: 229 TFTGHREW-VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Query: 112 SN-RIVSD-TFNETIRIWDIKTGKCLKVLPAHSDPVTAI-DFNRDGTMIVTSSYDGLYR- 167
S+ +S+ T +ET + K G L L D + D + ++ +D R
Sbjct: 288 SSYSSISEATGSETKKSG--KPGPFL--LSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRG 343
Query: 168 ILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVS 226
+L S GKFIL D TLR+W+Y ++ +KT + + + + S F T Y+V+
Sbjct: 344 VLFHS--GGKFILSCADDKTLRVWDYKNKRCMKTLNAHEH--FVTSLDFHKT-APYVVT 397
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 218 (81.8 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 50/158 (31%), Positives = 83/158 (52%)
Query: 18 TLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS------ISNFDSTPPSPLQKFTG 71
TL GH +S FS D L+ + S +KT + + +S ++ D +TG
Sbjct: 256 TLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTG 315
Query: 72 HEQGISDL-ATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIK 130
+ T R+++ T + L GH + I+FNPQ NR+++ + ++T RIWD++
Sbjct: 316 KLIATASADGTARVYNATTRKCITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQ 375
Query: 131 TGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRI 168
TG+CL+VL H+D + + FN G +++T S D RI
Sbjct: 376 TGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNSCRI 413
Score = 191 (72.3 bits), Expect = 6.0e-14, P = 6.0e-14
Identities = 47/173 (27%), Positives = 86/173 (49%)
Query: 81 TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPA 140
T +LW T T GHT + C++FNPQS + + + + T ++WDI++G+ + L
Sbjct: 158 TCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTG 217
Query: 141 HSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVG-TLDNTLRLWNYSTRKIL 199
H + ++ F+ G I+T S+D + DAST L+G + + L+++ IL
Sbjct: 218 HLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLIL 277
Query: 200 KTYSGYTNSKYCISSTFSVTNGKYIVS---HRDPVISVASHPAKNIIASGALD 249
+G + K C+ + T+GK + + H D ++ +IA+ + D
Sbjct: 278 ---TG-SMDKTCM--LWDATSGKCVATLTGHDDEILDSCFDYTGKLIATASAD 324
Score = 183 (69.5 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 46/179 (25%), Positives = 85/179 (47%)
Query: 81 TIRLWDVPTATSLKTLIGHTNYVFCINFN-PQSNRIVSDTFNETIRIWDIKTGKCLKVLP 139
T ++WD + L TL GH N V+ I FN P ++I + +F++T ++W +TGKC
Sbjct: 115 TCKVWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFR 174
Query: 140 AHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRL-WNYSTRKI 198
H+ + + FN T++ T S D ++ D + L G L + L ++ S +I
Sbjct: 175 GHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRI 234
Query: 199 LKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDNDRTMKIW 257
+ +T + S+ V ++ H + S ++I +G++D +T +W
Sbjct: 235 ITGSFDHTVVVWDASTGRKVHT---LIGHCAEISSALFSWDCSLILTGSMD--KTCMLW 288
Score = 177 (67.4 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 47/178 (26%), Positives = 86/178 (48%)
Query: 81 TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPA 140
T+ +WD T + TLIGH + F+ + I++ + ++T +WD +GKC+ L
Sbjct: 242 TVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTG 301
Query: 141 HSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRL-WNYSTRKIL 199
H D + F+ G +I T+S DG R+ +A+T L G ++ +N ++L
Sbjct: 302 HDDEILDSCFDYTGKLIATASADGTARVYNATTRKCITKLEGHEGEISKISFNPQGNRLL 361
Query: 200 KTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDNDRTMKIW 257
S T + + + + + + H D + S A + NI+ +G+ DN + +IW
Sbjct: 362 TGSSDKTARIWDVQTGQCL---QVLEGHTDEIFSCAFNYKGNIVITGSKDN--SCRIW 414
Score = 140 (54.3 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 47/185 (25%), Positives = 77/185 (41%)
Query: 18 TLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS------ISNFDSTPPSPLQKFTG 71
TL GHL + + F G + + S + T++ + S+ + + S L +
Sbjct: 214 TLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDC 273
Query: 72 HE--QGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDI 129
G D T LWD + + TL GH + + F+ I + + + T R+++
Sbjct: 274 SLILTGSMD-KTCMLWDATSGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNA 332
Query: 130 KTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLR 189
T KC+ L H ++ I FN G ++T S D RI D T +L G D
Sbjct: 333 TTRKCITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQVLEGHTDEIFS 392
Query: 190 L-WNY 193
+NY
Sbjct: 393 CAFNY 397
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 215 (80.7 bits), Expect = 4.3e-17, P = 4.3e-17
Identities = 62/220 (28%), Positives = 96/220 (43%)
Query: 17 QTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYS------LSSISNFDSTPPSPLQKFT 70
+TL GH +V + F H G+LL S SA+ T+ + + ++ D S
Sbjct: 144 RTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 71 G-HEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDI 129
G H S TI++W+V T +KT GH +V + N I S + ++T+R+W +
Sbjct: 204 GDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVV 263
Query: 130 KTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLR 189
T +C L H V I + + G + P G F+L G+ D T++
Sbjct: 264 ATKECKAELREHEHVVECISWAPESAHPTILEATGS-ETKKSGKP-GPFLLSGSRDKTIK 321
Query: 190 LWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRD 229
+W+ S L T G+ N + GKYIVS D
Sbjct: 322 MWDVSIGMCLMTLVGHDN---WVRGVLVHPGGKYIVSCAD 358
Score = 181 (68.8 bits), Expect = 3.8e-12, P = 3.8e-12
Identities = 35/88 (39%), Positives = 52/88 (59%)
Query: 81 TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPA 140
TI++WDV L TL+GH N+V + +P IVS ++T+RIWD K +C K L A
Sbjct: 319 TIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWDYKNKRCTKTLSA 378
Query: 141 HSDPVTAIDFNRDGTMIVTSSYDGLYRI 168
H VT++DF++ +VT S D ++
Sbjct: 379 HEHFVTSLDFHKTAPYVVTGSVDQTVKV 406
Score = 170 (64.9 bits), Expect = 8.5e-13, Sum P(2) = 8.5e-13
Identities = 52/171 (30%), Positives = 86/171 (50%)
Query: 19 LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGHEQGIS- 77
L+GH V+ V F ++ S+S + T+ + + +F+ T L+ T Q IS
Sbjct: 104 LSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHET-GDFERT----LKGHTDSVQDISF 158
Query: 78 D-----LA------TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRI 126
D LA TI+LWD ++T+ GH + V + P + IVS + ++TI++
Sbjct: 159 DHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKM 218
Query: 127 WDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGK 177
W++ TG C+K H + V + N+DGT+I +SS D R+ +T K
Sbjct: 219 WEVATGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVATKECK 269
Score = 139 (54.0 bits), Expect = 6.7e-07, P = 6.7e-07
Identities = 50/182 (27%), Positives = 84/182 (46%)
Query: 85 WDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDP 144
W +P L GH + V + F+P + IVS + + TI++WD +TG + L H+D
Sbjct: 94 W-IPRPPEKYALSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDS 152
Query: 145 VTAIDFNRDGTMIVTSSYDGLYRILDAS------TPNG---KFILVGTLDNTLRLWNYST 195
V I F+ G ++ + S D ++ D T +G V + N + + S
Sbjct: 153 VQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212
Query: 196 RKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDNDRTMK 255
K +K + T YC+ TF+ HR+ V V + +IAS + ND+T++
Sbjct: 213 DKTIKMWEVATG--YCVK-TFT--------GHREWVRMVRPNQDGTLIASSS--NDQTVR 259
Query: 256 IW 257
+W
Sbjct: 260 VW 261
Score = 137 (53.3 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 61/238 (25%), Positives = 107/238 (44%)
Query: 2 SSDRSLE--SFRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS---IS 56
S+D +++ F+ + +T++GH VS V +G + S+S +KT+ + +++ +
Sbjct: 169 SADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVK 228
Query: 57 NFDSTPP-----SPLQKFTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQ 111
F P Q T +D T+R+W V T L H + V CI++ P+
Sbjct: 229 TFTGHREWVRMVRPNQDGTLIASSSND-QTVRVWVVATKECKAELREHEHVVECISWAPE 287
Query: 112 SNR--IVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAI-DFNRDGTMIVTSSYDGLYRI 168
S I+ T +ET + K G L L D + D + ++ +D R
Sbjct: 288 SAHPTILEATGSETKKSG--KPGPFL--LSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRG 343
Query: 169 LDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVS 226
+ P GK+I+ D TLR+W+Y ++ KT S + + + S F T Y+V+
Sbjct: 344 VLVH-PGGKYIVSCADDKTLRIWDYKNKRCTKTLSAHEH--FVTSLDFHKT-APYVVT 397
Score = 54 (24.1 bits), Expect = 8.5e-13, Sum P(2) = 8.5e-13
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 224 IVSHRDPVISVASHPAKNIIASGALDNDRTMKIW 257
+V H + V V HP I S A +D+T++IW
Sbjct: 334 LVGHDNWVRGVLVHPGGKYIVSCA--DDKTLRIW 365
Score = 41 (19.5 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 4/14 (28%), Positives = 12/14 (85%)
Query: 178 FILVGTLDNTLRLW 191
+++ G++D T+++W
Sbjct: 394 YVVTGSVDQTVKVW 407
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 208 (78.3 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 67/249 (26%), Positives = 113/249 (45%)
Query: 18 TLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYS------LSSISNFDSTPPSPLQKFTG 71
TL GH AV + ++ DG LL S+S +KT+ + + + S S G
Sbjct: 94 TLKGHSGAVMELHYNTDGSLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNSCFPARRG 153
Query: 72 HEQGI--SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDI 129
+ SD T++LWD+ S+ T +T V + FN S++I+S + I++WD+
Sbjct: 154 PQLACTGSDDGTVKLWDIRKKASVHTF-QNTYQVLSVTFNDTSDQIISGGIDNDIKVWDL 212
Query: 130 KTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDAS--TPNGKFILV--GTLD 185
+ K + + H D VT + + DG+ ++++S D R+ D P + + + G +
Sbjct: 213 RQNKLIYSMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVH 272
Query: 186 N----TLRL-WNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAK 240
N LR W+ KI +G + I T + + H V VA HP +
Sbjct: 273 NFEKNLLRCSWSADGSKIA---AGSADRFVYIWDTTTRRIVYKLPGHAGSVNEVAFHPEE 329
Query: 241 NIIASGALD 249
I+ SG+ D
Sbjct: 330 PIVLSGSSD 338
Score = 112 (44.5 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 26/92 (28%), Positives = 46/92 (50%)
Query: 88 PTATSLKT----LIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKC--LKVLPAH 141
P ++SL+ L GH V+C F+P + S ++ I +W++ G C L H
Sbjct: 40 PRSSSLQAPIMLLSGHEGEVYCCKFHPNGATLASSGYDRLILMWNVY-GDCENYATLKGH 98
Query: 142 SDPVTAIDFNRDGTMIVTSSYDGLYRILDAST 173
S V + +N DG+++ ++S D + D+ T
Sbjct: 99 SGAVMELHYNTDGSLLFSASTDKTVCVWDSET 130
Score = 52 (23.4 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 231 VISVASHPAKNIIASGALDNDRTMKIW 257
V+SV + + I SG +DND +K+W
Sbjct: 186 VLSVTFNDTSDQIISGGIDND--IKVW 210
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 210 (79.0 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 62/249 (24%), Positives = 111/249 (44%)
Query: 18 TLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSL------SSISNFDSTPPSPLQKFTG 71
T GH + + F+ L+ + S + T + + S+++ + S TG
Sbjct: 172 TFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTG 231
Query: 72 HE--QGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDI 129
G D I LWDVP+ + L GH + C+ FN + I + + +++ ++WD
Sbjct: 232 DRLVTGSFDHTAI-LWDVPSGRKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDA 290
Query: 130 KTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLR 189
+ G+CL L H+D V + FN G +I T+S DG R+ T L G +
Sbjct: 291 EGGQCLATLLGHNDEVLDVCFNYTGQLIATASADGTSRVFSTDTFQCLCQLEGHKGEISK 350
Query: 190 L-WNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGAL 248
+ +N ++L T+ +C+ + + + + H D + S A + + I +G+
Sbjct: 351 VCFNAQGSRVLTASVDKTSRVWCVKTGACL---QVLEGHSDEIFSCAFNYEGDTIITGSK 407
Query: 249 DNDRTMKIW 257
DN T +IW
Sbjct: 408 DN--TCRIW 414
Score = 204 (76.9 bits), Expect = 7.4e-16, P = 7.4e-16
Identities = 63/250 (25%), Positives = 115/250 (46%)
Query: 18 TLNGHLRAVSYVKFSHD-GRLLTSSSAEKTLLTYSLSSISNFDS----TPPSPLQKFTGH 72
TL GH V + F++ G + + S +KT +S + F + T F
Sbjct: 129 TLEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQ 188
Query: 73 EQ----GISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWD 128
G D T +LWDV + + TL GH + + FN +R+V+ +F+ T +WD
Sbjct: 189 STLVATGSMD-TTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWD 247
Query: 129 IKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTL 188
+ +G+ + VL H ++ + FN D ++I T+S D ++ DA L+G D L
Sbjct: 248 VPSGRKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVL 307
Query: 189 RL-WNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGA 247
+ +NY T +++ T S S+ + TF + H+ + V + + + + +
Sbjct: 308 DVCFNY-TGQLIATASADGTSRVFSTDTFQCLC--QLEGHKGEISKVCFNAQGSRVLTAS 364
Query: 248 LDNDRTMKIW 257
+D +T ++W
Sbjct: 365 VD--KTSRVW 372
Score = 194 (73.4 bits), Expect = 9.3e-15, P = 9.3e-15
Identities = 49/184 (26%), Positives = 92/184 (50%)
Query: 81 TIRLWDVPTATSLKTLIGHTNYVFCINFN-PQSNRIVSDTFNETIRIWDIKTGKCLKVLP 139
T ++WD + L TL GH N V+ I FN P +++ + +F++T ++W +TGKC
Sbjct: 115 TCKIWDTASGEELHTLEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFR 174
Query: 140 AHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYSTRKIL 199
H+ + + FN T++ T S D ++ D + L G + L +T L
Sbjct: 175 GHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDRL 234
Query: 200 KTYSGYTNSKYCISSTFSVTNGK--YIVS-HRDPVISVASHPAKNIIASGALDNDRTMKI 256
T S + ++ + + V +G+ +++S HR + V + ++IA+ +LD ++ K+
Sbjct: 235 VTGS-FDHT----AILWDVPSGRKVHVLSGHRGEISCVQFNWDCSLIATASLD--KSCKV 287
Query: 257 WTQE 260
W E
Sbjct: 288 WDAE 291
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 208 (78.3 bits), Expect = 2.7e-16, P = 2.7e-16
Identities = 53/182 (29%), Positives = 90/182 (49%)
Query: 81 TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPA 140
T +LW V T T GHT + C++FNPQS + + + + T ++WDI+ G+ + L
Sbjct: 158 TCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRG 217
Query: 141 HSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVG-TLDNTLRLWNYSTRKIL 199
HS + ++ FN G I+T S+D + DA T IL+G + + +N+ IL
Sbjct: 218 HSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLIL 277
Query: 200 KTYSGYTNSKYCISSTFSVTNGKYIVS---HRDPVISVASHPAKNIIASGALDNDRTMKI 256
+G + K C + TNGK + + H D ++ +IA+ + D T +I
Sbjct: 278 ---TG-SMDKTC--KLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADG--TARI 329
Query: 257 WT 258
++
Sbjct: 330 FS 331
Score = 199 (75.1 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 46/179 (25%), Positives = 87/179 (48%)
Query: 81 TIRLWDVPTATSLKTLIGHTNYVFCINFN-PQSNRIVSDTFNETIRIWDIKTGKCLKVLP 139
T +LWD + L TL GH N V+ I FN P ++I + +F++T ++W ++TGKC
Sbjct: 115 TCKLWDTASGEELNTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFR 174
Query: 140 AHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRL-WNYSTRKI 198
H+ + + FN T++ T S D ++ D + L G + L +N S +I
Sbjct: 175 GHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRI 234
Query: 199 LKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDNDRTMKIW 257
+ +G + + + ++ H + S + + ++I +G++D +T K+W
Sbjct: 235 I---TGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMD--KTCKLW 288
Score = 198 (74.8 bits), Expect = 3.4e-15, P = 3.4e-15
Identities = 46/157 (29%), Positives = 79/157 (50%)
Query: 19 LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYS------LSSISNFDSTPPSPLQKFTGH 72
L GH +S F+ D L+ + S +KT + +++++ D +TG
Sbjct: 257 LIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGK 316
Query: 73 EQGISDL-ATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKT 131
+ T R++ T + L GH + I+FNPQ N +++ + ++T RIWD +T
Sbjct: 317 LIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQT 376
Query: 132 GKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRI 168
G+CL+VL H+D + + FN G +++T S D RI
Sbjct: 377 GQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNTCRI 413
Score = 185 (70.2 bits), Expect = 9.9e-13, P = 9.9e-13
Identities = 50/178 (28%), Positives = 84/178 (47%)
Query: 81 TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPA 140
T+ +WD T + LIGH + +FN + I++ + ++T ++WD GKC+ L
Sbjct: 242 TVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTG 301
Query: 141 HSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRL-WNYSTRKIL 199
H D + F+ G +I T+S DG RI A+T L G ++ +N +L
Sbjct: 302 HDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNHLL 361
Query: 200 KTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDNDRTMKIW 257
T S ++ + T + + H D + S A + NI+ +G+ DN T +IW
Sbjct: 362 -TGSSDKTARIWDAQTGQCL--QVLEGHTDEIFSCAFNYKGNIVITGSKDN--TCRIW 414
Score = 126 (49.4 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 34/118 (28%), Positives = 59/118 (50%)
Query: 18 TLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS---ISNFDSTPPSPLQKFTGHEQ 74
TL GH + F + G+L+ ++SA+ T +S ++ I+ + + K + + Q
Sbjct: 298 TLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHE-GEISKISFNPQ 356
Query: 75 GISDLA-----TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIW 127
G L T R+WD T L+ L GHT+ +F FN + N +++ + + T RIW
Sbjct: 357 GNHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNTCRIW 414
>CGD|CAL0000165 [details] [associations]
symbol:orf19.536 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0046695 "SLIK (SAGA-like) complex" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0032947
"protein complex scaffold" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 CGD:CAL0000165
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03130 HOGENOM:HOG000212424
RefSeq:XP_717399.1 RefSeq:XP_717491.1 ProteinModelPortal:Q5A6L8
STRING:Q5A6L8 GeneID:3640929 GeneID:3640987 KEGG:cal:CaO19.536
KEGG:cal:CaO19.8169 Uniprot:Q5A6L8
Length = 798
Score = 213 (80.0 bits), Expect = 3.0e-16, P = 3.0e-16
Identities = 54/167 (32%), Positives = 83/167 (49%)
Query: 11 RPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS----ISNFDSTPPSPL 66
+P T+ L GH V V FS D + L S S +KT+ +SL + +S T P
Sbjct: 505 KPQENTRKLIGHSGPVYGVSFSPDNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVWD 564
Query: 67 QKFT--GHE-QGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNET 123
KF+ GH S T RLW L+ GH N V C+ F+P SN + + + ++T
Sbjct: 565 VKFSPLGHYFVTASHDQTARLWATDHIYPLRIFAGHINDVDCVEFHPNSNYVFTGSSDKT 624
Query: 124 IRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
R+WD+ TG C++V H++ V + + DG + + DG+ + D
Sbjct: 625 CRMWDVHTGNCVRVFLGHTNSVNCLAVSPDGRWLASGGEDGIICVWD 671
Score = 180 (68.4 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 54/182 (29%), Positives = 87/182 (47%)
Query: 2 SSDRSLE--SFRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLT------YSL- 52
S D+++ S YT + GH + V VKFS G ++S ++T Y L
Sbjct: 536 SEDKTVRLWSLDTYTALVSYKGHTQPVWDVKFSPLGHYFVTASHDQTARLWATDHIYPLR 595
Query: 53 ---SSISNFDSTPPSPLQKFTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFN 109
I++ D P + G SD T R+WDV T ++ +GHTN V C+ +
Sbjct: 596 IFAGHINDVDCVEFHPNSNYVF--TGSSD-KTCRMWDVHTGNCVRVFLGHTNSVNCLAVS 652
Query: 110 PQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDP-VTAIDFNRDGTMIVTSSYDGLYRI 168
P + S + I +WDI +G+ LK + H+ + ++ F+RDGT++V+ D R+
Sbjct: 653 PDGRWLASGGEDGIICVWDIGSGRRLKSMRGHARASLYSLAFSRDGTVLVSGCADNSVRV 712
Query: 169 LD 170
D
Sbjct: 713 WD 714
Score = 157 (60.3 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 47/186 (25%), Positives = 87/186 (46%)
Query: 77 SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLK 136
S+ T+RLW + T T+L + GHT V+ + F+P + V+ + ++T R+W L+
Sbjct: 536 SEDKTVRLWSLDTYTALVSYKGHTQPVWDVKFSPLGHYFVTASHDQTARLWATDHIYPLR 595
Query: 137 VLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYSTR 196
+ H + V ++F+ + + T S D R+ D T N + +G ++ L
Sbjct: 596 IFAGHINDVDCVEFHPNSNYVFTGSSDKTCRMWDVHTGNCVRVFLGHTNSVNCLAVSPDG 655
Query: 197 KILKTYSGYTNSKYCISSTFSVTNGKYIVSH-RDPVISVASHPAKNIIASGALDNDRTMK 255
+ L SG + C+ S K + H R + S+A ++ SG DN +++
Sbjct: 656 RWLA--SGGEDGIICVWDIGSGRRLKSMRGHARASLYSLAFSRDGTVLVSGCADN--SVR 711
Query: 256 IWTQEK 261
+W +K
Sbjct: 712 VWDVKK 717
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 205 (77.2 bits), Expect = 8.9e-16, P = 8.9e-16
Identities = 71/266 (26%), Positives = 119/266 (44%)
Query: 2 SSDRSLE--SFRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKT--LLTYSLSSISN 57
S D+SL + P GH ++ V F+ G L+ SSS ++T L T S+ S
Sbjct: 37 SCDKSLMIWNLAPKARAFRFVGHTDVITGVNFAPSGSLVASSSRDQTVRLWTPSIKGEST 96
Query: 58 FDSTPPSPLQK--FTGHEQGI---SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQS 112
+ ++ F+ Q + SD ++++W V L +L HTN+V C F+P
Sbjct: 97 VFKAHTASVRSVHFSRDGQRLVTASDDKSVKVWGVERKKFLYSLNRHTNWVRCARFSPDG 156
Query: 113 NRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDAS 172
I S + T+R+WD + +C+ + + T +DFN GT I +S D +I D
Sbjct: 157 RLIASCGDDRTVRLWDTSSHQCINIFTDYGGSATFVDFNSSGTCIASSGADNTIKIWDIR 216
Query: 173 TPNGKFILVGTLDNT-LRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVS---HR 228
T K I + N + +++ SG ++S I + G+ I + H+
Sbjct: 217 T--NKLIQHYKVHNAGVNCFSFHPSGNY-LISGSSDSTIKI---LDLLEGRLIYTLHGHK 270
Query: 229 DPVISVASHPAKNIIASGALDNDRTM 254
PV++V ++ ASG D+ M
Sbjct: 271 GPVLTVTFSRDGDLFASGGADSQVLM 296
Score = 142 (55.0 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 61/260 (23%), Positives = 115/260 (44%)
Query: 14 TLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGHE 73
TL + GH +S F+ + + L + S +K+L+ ++L+ P + +F GH
Sbjct: 9 TLERHFKGHKDVISCADFNPNNKQLATGSCDKSLMIWNLA--------PKARAFRFVGHT 60
Query: 74 QGISDL---------------ATIRLWDVPTATSLKTLI-GHTNYVFCINFNPQSNRIVS 117
I+ + T+RLW P+ T+ HT V ++F+ R+V+
Sbjct: 61 DVITGVNFAPSGSLVASSSRDQTVRLW-TPSIKGESTVFKAHTASVRSVHFSRDGQRLVT 119
Query: 118 DTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGK 177
+ ++++++W ++ K L L H++ V F+ DG +I + D R+ D S+
Sbjct: 120 ASDDKSVKVWGVERKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCI 179
Query: 178 FILVGTLDN-TLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVAS 236
I + T +N S I + + T + I + + + K H V +
Sbjct: 180 NIFTDYGGSATFVDFNSSGTCIASSGADNTIKIWDIRTNKLIQHYKV---HNAGVNCFSF 236
Query: 237 HPAKNIIASGALDNDRTMKI 256
HP+ N + SG+ +D T+KI
Sbjct: 237 HPSGNYLISGS--SDSTIKI 254
Score = 118 (46.6 bits), Expect = 0.00023, P = 0.00023
Identities = 38/165 (23%), Positives = 81/165 (49%)
Query: 98 GHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKT-GKCLKVLPAHSDPVTAIDFNRDGTM 156
GH + + C +FNP + ++ + + ++++ IW++ + + + H+D +T ++F G++
Sbjct: 16 GHKDVISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFV-GHTDVITGVNFAPSGSL 74
Query: 157 IVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYSTR-KILKTYSGYTNSKYCISST 215
+ +SS D R+ S G+ + ++R ++S + L T S + K
Sbjct: 75 VASSSRDQTVRLWTPSI-KGESTVFKAHTASVRSVHFSRDGQRLVTASDDKSVK-----V 128
Query: 216 FSVTNGKYIVS---HRDPVISVASHPAKNIIASGALDNDRTMKIW 257
+ V K++ S H + V P +IAS +DRT+++W
Sbjct: 129 WGVERKKFLYSLNRHTNWVRCARFSPDGRLIAS--CGDDRTVRLW 171
>ASPGD|ASPL0000015866 [details] [associations]
symbol:AN8183 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003676 EMBL:BN001302 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0030529 OMA:VWQCDTP InterPro:IPR027145
InterPro:IPR007148 PANTHER:PTHR19858 Pfam:PF04003
ProteinModelPortal:C8V743 EnsemblFungi:CADANIAT00004225
Uniprot:C8V743
Length = 851
Score = 148 (57.2 bits), Expect = 1.0e-15, Sum P(3) = 1.0e-15
Identities = 29/96 (30%), Positives = 51/96 (53%)
Query: 75 GISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKC 134
G S + +W+ + + + GH + + + ++P RIV+ + I++WD+K+G C
Sbjct: 313 GSSKFGQLLVWEWQSESYILKQQGHLDSMNALAYSPDGQRIVTAADDGKIKVWDVKSGFC 372
Query: 135 LKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
L H+ VTA F++ G ++ TSS DG R D
Sbjct: 373 LVTFTEHTSGVTACQFSKKGNVLFTSSLDGSVRAWD 408
Score = 93 (37.8 bits), Expect = 1.0e-15, Sum P(3) = 1.0e-15
Identities = 22/67 (32%), Positives = 36/67 (53%)
Query: 10 FRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKF 69
F P+ L + L GH V ++++S D R L ++S + T +SL F+ P+ L
Sbjct: 138 FAPFVLHRDLAGHFDEVQHIEWSSDSRFLLTASKDLTARVWSLDPEDGFE---PTTL--- 191
Query: 70 TGHEQGI 76
+GH QG+
Sbjct: 192 SGHRQGV 198
Score = 84 (34.6 bits), Expect = 4.0e-08, Sum P(3) = 4.0e-08
Identities = 21/88 (23%), Positives = 42/88 (47%)
Query: 77 SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLK 136
+D I++WDV + L T HT+ V F+ + N + + + + ++R WD+ + +
Sbjct: 357 ADDGKIKVWDVKSGFCLVTFTEHTSGVTACQFSKKGNVLFTSSLDGSVRAWDLIRYRNFR 416
Query: 137 VLPAHSD-PVTAIDFNRDGTMIVTSSYD 163
A S +++ + G +I S D
Sbjct: 417 TFTAPSRLSFSSLAVDPSGEVICAGSPD 444
Score = 79 (32.9 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 27/106 (25%), Positives = 52/106 (49%)
Query: 84 LWDVPTATSLKTL-IGHTNY-VFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAH 141
L+++P ++ L I +N V IN + S F + + +W+ ++ + H
Sbjct: 279 LYELPEFNTIHLLSISQSNIDVVSINKTGEWLAFGSSKFGQLL-VWEWQSESYILKQQGH 337
Query: 142 SDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNT 187
D + A+ ++ DG IVT++ DG ++ D + G F LV ++T
Sbjct: 338 LDSMNALAYSPDGQRIVTAADDGKIKVWDVKS--G-FCLVTFTEHT 380
Score = 64 (27.6 bits), Expect = 1.0e-15, Sum P(3) = 1.0e-15
Identities = 20/86 (23%), Positives = 40/86 (46%)
Query: 171 ASTPNGKFILVGTLDN-TLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRD 229
A P+G+ I G+ D+ + +W+ T ++L SG+ +S+ +G ++++
Sbjct: 430 AVDPSGEVICAGSPDSFDIHVWSVQTGQLLDQLSGHEGP---VSALAFAADGNHLLTFWS 486
Query: 230 --PVISVASHPAKNIIASGALDNDRT 253
+ VA + I+ G DRT
Sbjct: 487 VADAVQVAGIDGRRDISGGRKITDRT 512
Score = 41 (19.5 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 11/49 (22%), Positives = 23/49 (46%)
Query: 176 GKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYI 224
G + +LD ++R W+ + +T++ S+ SS +G+ I
Sbjct: 392 GNVLFTSSLDGSVRAWDLIRYRNFRTFTA--PSRLSFSSLAVDPSGEVI 438
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 202 (76.2 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 58/220 (26%), Positives = 97/220 (44%)
Query: 17 QTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYS------LSSISNFDSTPPSPLQKFT 70
+TL GH +V + F G+LL S SA+ T+ + + ++ D S
Sbjct: 144 RTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 71 G-HEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDI 129
G H S T+++W+V T +KT GH +V + N + S + ++T+R+W +
Sbjct: 204 GDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVV 263
Query: 130 KTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLR 189
T +C L H V I + + S G + P G F+L G+ D T++
Sbjct: 264 ATKECKAELREHEHVVECISWAPESAHPTISEATGSEN-KKSGKP-GPFLLSGSRDKTIK 321
Query: 190 LWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRD 229
+W+ ST L T G+ N + G+++VS D
Sbjct: 322 MWDISTGMCLMTLVGHDN---WVRGVLFHPGGRFVVSCAD 358
Score = 193 (73.0 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 35/88 (39%), Positives = 55/88 (62%)
Query: 81 TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPA 140
TI++WD+ T L TL+GH N+V + F+P +VS ++T+RIWD K +C+K L A
Sbjct: 319 TIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDYKNKRCMKTLSA 378
Query: 141 HSDPVTAIDFNRDGTMIVTSSYDGLYRI 168
H VT++DF++ +VT S D ++
Sbjct: 379 HEHFVTSLDFHKASPYVVTGSVDQTVKV 406
Score = 167 (63.8 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 44/167 (26%), Positives = 84/167 (50%)
Query: 19 LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDST---PPSPLQKFTGHEQG 75
L+GH V+ V F L+ S+S + T+ + + +F+ T +Q + + G
Sbjct: 104 LSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEA-GDFERTLKGHTDSVQDISFDQTG 162
Query: 76 --ISDLA---TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIK 130
++ + TI+LWD ++T+ GH + V + P + IVS + ++T+++W++
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVA 222
Query: 131 TGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGK 177
TG C+K H + V + N+DGT++ + S D R+ +T K
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKECK 269
Score = 131 (51.2 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 47/182 (25%), Positives = 83/182 (45%)
Query: 85 WDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDP 144
W +P L GH + V + F+P + +VS + + TI++WD + G + L H+D
Sbjct: 94 W-IPRPPEKYALSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDS 152
Query: 145 VTAIDFNRDGTMIVTSSYDGLYRILDAS------TPNG---KFILVGTLDNTLRLWNYST 195
V I F++ G ++ + S D ++ D T +G V + N + + S
Sbjct: 153 VQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212
Query: 196 RKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDNDRTMK 255
K +K + T YC+ TF+ HR+ V V + ++AS ND+T++
Sbjct: 213 DKTMKMWEVATG--YCVK-TFT--------GHREWVRMVRPNQDGTLLAS--CSNDQTVR 259
Query: 256 IW 257
+W
Sbjct: 260 VW 261
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 200 (75.5 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 68/269 (25%), Positives = 114/269 (42%)
Query: 1 MSSDRSLESFRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTY--SLSSISNF 58
M S + +P + GH AV+ V FS G LL S S +KT+ + ++ S
Sbjct: 39 MDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTV 98
Query: 59 DSTPPSPLQK--FTGHEQGI---SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSN 113
+ ++ F Q + SD T+++W L +L H N+V C F+P
Sbjct: 99 FRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGR 158
Query: 114 RIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDAST 173
IVS + ++T+++WD + +C+ H VT +DF+ GT I + D ++ DA T
Sbjct: 159 LIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDART 218
Query: 174 PN--GKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVS---HR 228
+ L N L + + L T S + K + G+ + + H+
Sbjct: 219 HRLLQHYQLHSAAVNALSF--HPSGNYLITASSDSTLKI-----LDLMEGRLLYTLHGHQ 271
Query: 229 DPVISVASHPAKNIIASGALDNDRTMKIW 257
P +VA ASG +D + +W
Sbjct: 272 GPATTVAFSRTGEYFASGG--SDEQVMVW 298
Score = 134 (52.2 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 46/176 (26%), Positives = 82/176 (46%)
Query: 14 TLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGHE 73
+L + GH AV+ V FS + + L S S + TL+ + + P S +FTGH+
Sbjct: 10 SLERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMK--------PQSRAYRFTGHK 61
Query: 74 QGISD---------LA------TIRLWDVPTATSLKTLI-GHTNYVFCINFNPQSNRIVS 117
++ LA T+R+W VP T+ HT V ++F +V+
Sbjct: 62 DAVTCVNFSPSGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQSLVT 120
Query: 118 DTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDAST 173
+ ++T+++W + L L H + V F+ DG +IV++S D ++ D ++
Sbjct: 121 ASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTS 176
Score = 113 (44.8 bits), Expect = 0.00064, P = 0.00064
Identities = 41/163 (25%), Positives = 72/163 (44%)
Query: 98 GHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMI 157
GH + V C++F+ + + S + + T+ IW +K H D VT ++F+ G ++
Sbjct: 17 GHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLL 76
Query: 158 VTSSYDGLYRILDASTPN--GKFILVGTLDNTLRLWNY-STRKILKTYSGYTNSKYCISS 214
+ S D RI PN G+ + T+R ++ S + L T S K + S
Sbjct: 77 ASGSRDKTVRIW---VPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVK--VWS 131
Query: 215 TFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDNDRTMKIW 257
T + H + V P +I S + +D+T+K+W
Sbjct: 132 THRQRFLFSLTQHINWVRCAKFSPDGRLIVSAS--DDKTVKLW 172
>WB|WBGene00004767 [details] [associations]
symbol:sel-10 species:6239 "Caenorhabditis elegans"
[GO:0008593 "regulation of Notch signaling pathway" evidence=IGI]
[GO:0030424 "axon" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660
GO:GO:0045746 GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 201 (75.8 bits), Expect = 3.5e-15, P = 3.5e-15
Identities = 64/251 (25%), Positives = 117/251 (46%)
Query: 18 TLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYS------LSSISNFDSTPPSPLQKFTG 71
TL GH V + S GR + S S ++T+ +S L ++ ST +
Sbjct: 291 TLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGSI 350
Query: 72 HEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKT 131
G D T+R+WDV + L TL GH V C+ F+ +VS ++ T++IW+ T
Sbjct: 351 LVTGSRD-TTLRVWDVESGRHLATLHGHHAAVRCVQFD--GTTVVSGGYDFTVKIWNAHT 407
Query: 132 GKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLW 191
G+C++ L H++ V ++ F + +++ + S D R+ D + P G+ + +T
Sbjct: 408 GRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTS 467
Query: 192 NYSTR-KILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDN 250
R IL + + +S + T + HR + S+ +N++A+ + +
Sbjct: 468 GMQLRGNILVSCNA--DSHVRVWDIHEGTCVHMLSGHRSAITSLQWF-GRNMVATSS--D 522
Query: 251 DRTMKIWTQEK 261
D T+K+W E+
Sbjct: 523 DGTVKLWDIER 533
Score = 143 (55.4 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 38/154 (24%), Positives = 70/154 (45%)
Query: 77 SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLK 136
SD T+++W + + TL+GHT V+ + IVS + + T+++W G L
Sbjct: 273 SDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLH 332
Query: 137 VLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTP------------------NGKF 178
L H+ V + G+++VT S D R+ D + +G
Sbjct: 333 TLQGHTSTVRCMAMA--GSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQFDGTT 390
Query: 179 ILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCI 212
++ G D T+++WN T + ++T +G+ N Y +
Sbjct: 391 VVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSL 424
>UNIPROTKB|Q93794 [details] [associations]
symbol:sel-10 "F-box/WD repeat-containing protein sel-10"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0046660 "female
sex differentiation" evidence=IMP] [GO:0045746 "negative regulation
of Notch signaling pathway" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660 GO:GO:0045746
GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 201 (75.8 bits), Expect = 3.5e-15, P = 3.5e-15
Identities = 64/251 (25%), Positives = 117/251 (46%)
Query: 18 TLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYS------LSSISNFDSTPPSPLQKFTG 71
TL GH V + S GR + S S ++T+ +S L ++ ST +
Sbjct: 291 TLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGSI 350
Query: 72 HEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKT 131
G D T+R+WDV + L TL GH V C+ F+ +VS ++ T++IW+ T
Sbjct: 351 LVTGSRD-TTLRVWDVESGRHLATLHGHHAAVRCVQFD--GTTVVSGGYDFTVKIWNAHT 407
Query: 132 GKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLW 191
G+C++ L H++ V ++ F + +++ + S D R+ D + P G+ + +T
Sbjct: 408 GRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTS 467
Query: 192 NYSTR-KILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDN 250
R IL + + +S + T + HR + S+ +N++A+ + +
Sbjct: 468 GMQLRGNILVSCNA--DSHVRVWDIHEGTCVHMLSGHRSAITSLQWF-GRNMVATSS--D 522
Query: 251 DRTMKIWTQEK 261
D T+K+W E+
Sbjct: 523 DGTVKLWDIER 533
Score = 143 (55.4 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 38/154 (24%), Positives = 70/154 (45%)
Query: 77 SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLK 136
SD T+++W + + TL+GHT V+ + IVS + + T+++W G L
Sbjct: 273 SDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLH 332
Query: 137 VLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTP------------------NGKF 178
L H+ V + G+++VT S D R+ D + +G
Sbjct: 333 TLQGHTSTVRCMAMA--GSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQFDGTT 390
Query: 179 ILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCI 212
++ G D T+++WN T + ++T +G+ N Y +
Sbjct: 391 VVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSL 424
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 202 (76.2 bits), Expect = 3.7e-15, P = 3.7e-15
Identities = 63/223 (28%), Positives = 103/223 (46%)
Query: 46 TLLTYSLSSISNFDSTPPS-PLQKFTGH--EQGISDLATIRLWDVPTATSLKTLIGHTNY 102
T+ ++ L I S S L K +G G D + +W V + +L GHT+
Sbjct: 7 TITSWKLQEIVAHSSNVSSLVLGKSSGRLLATGGED-CRVNIWAVSKPNCIMSLTGHTSA 65
Query: 103 VFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSY 162
V CI FN R+V+ + + ++R+WD++ K L+ L H ++++DF+ G + + S
Sbjct: 66 VGCIQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSV 125
Query: 163 DGLYRILDASTPNGKFILVGTLDNTLRLWNYSTR-KILKTYSGYTNSKYCISSTFSVTNG 221
D ++ D F G +R +S K L + S + K + + G
Sbjct: 126 DSNIKLWDVRRKGCVFRYKGHTQ-AVRCLAFSPDGKWLASASDDSTVKL-----WDLIAG 179
Query: 222 KYIV---SHRDPVISVASHPAKNIIASGALDNDRTMKIWTQEK 261
K I SH V V HP + ++ASG+ D RT+K+W EK
Sbjct: 180 KMITEFTSHTSAVNVVQFHPNEYLLASGSAD--RTVKLWDLEK 220
Score = 127 (49.8 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 34/158 (21%), Positives = 72/158 (45%)
Query: 15 LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSL---SSISNFDS-TPPSPLQKFT 70
+ +TL GH ++S + F G L S S + + + + + + T F+
Sbjct: 97 ILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFS 156
Query: 71 GHEQGI---SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIW 127
+ + SD +T++LWD+ + HT+ V + F+P + S + + T+++W
Sbjct: 157 PDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLW 216
Query: 128 DIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGL 165
D++ + + V ++ FN DG+ + + S + L
Sbjct: 217 DLEKFNMIGSSEGETGVVRSVLFNPDGSCLYSGSENTL 254
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 201 (75.8 bits), Expect = 4.4e-15, P = 4.4e-15
Identities = 69/254 (27%), Positives = 122/254 (48%)
Query: 2 SSDRSL--ESFRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNF- 58
SSD+S+ R YTL L GH V FS G + SSSA+ T+ +S +N
Sbjct: 398 SSDQSIGPNGRRSYTL---LLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLV 454
Query: 59 ----DSTPPSPLQKFT--GHE-QGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQ 111
+ P Q F+ GH S T R+W + L+ + GH + V C+ ++P
Sbjct: 455 CYKGHNYPVWDAQ-FSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPN 513
Query: 112 SNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDA 171
N I + + ++T+R+WD++TG+C+++ H V ++ + DG + + DG + D
Sbjct: 514 CNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDL 573
Query: 172 STPNGKFILVGTLDNTLRLWN--YSTR-KILKTYSGYTNSK-YCISSTFSVTNGKYIVSH 227
ST L+G N+ +W+ YS +L + S K + ++S+ +T + +
Sbjct: 574 STARCITPLMG--HNSC-VWSLSYSGEGSLLASGSADCTVKLWDVTSSTKLTKAEEKNGN 630
Query: 228 RDPVISVASHPAKN 241
+ + S+ + P K+
Sbjct: 631 SNRLRSLRTFPTKS 644
Score = 151 (58.2 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 63/239 (26%), Positives = 104/239 (43%)
Query: 25 AVSYVKF--SHDGRLLTSSSAEKTLLT--YSLSSISNFDSTPPSPLQKFTGHEQGISDLA 80
+VS+ F +H+G +S S + +L+ +S SSI +D Q +G Q +D +
Sbjct: 342 SVSFYTFVNTHNGLNCSSISHDGSLVAGGFSDSSIKVWDMAKIG--QAGSGALQAENDSS 399
Query: 81 TIRLWDVPTAT-SLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLP 139
+ P S L+GH+ V+ F+P + ++S + + TIR+W K L
Sbjct: 400 DQSIG--PNGRRSYTLLLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYK 457
Query: 140 AHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTL-DNTLRLWNYSTRKI 198
H+ PV F+ G + S+D RI I+ G L D W+ + I
Sbjct: 458 GHNYPVWDAQFSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYI 517
Query: 199 LKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDNDRTMKIW 257
S T + + + V + + HR V+S+A P +ASG D D T+ +W
Sbjct: 518 ATGSSDKTVRLWDVQTGECV---RIFIGHRSMVLSLAMSPDGRYMASG--DEDGTIMMW 571
>DICTYBASE|DDB_G0295793 [details] [associations]
symbol:DDB_G0295793 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0295793 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000207 KO:K15542 RefSeq:XP_002649088.2
ProteinModelPortal:C7G084 EnsemblProtists:DDB0252613 GeneID:8629212
KEGG:ddi:DDB_G0295793 OMA:APAQYPQ ProtClustDB:CLSZ2735765
Uniprot:C7G084
Length = 657
Score = 200 (75.5 bits), Expect = 5.5e-15, P = 5.5e-15
Identities = 64/252 (25%), Positives = 118/252 (46%)
Query: 19 LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTY--SLSSISNFDSTPPSPLQ--KFTGHEQ 74
L H AV + +SH+ + S + + +++++ F + S ++ F+ +
Sbjct: 163 LQAHDSAVRSIIWSHNEDWMVSGDDSGNIKYWQPNMNNVKIFKAHEQSKIRGLSFSPTDL 222
Query: 75 GISDLAT---IRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKT 131
++ A I++WD T L+GH V C++++PQ + IVS + I+IWD K+
Sbjct: 223 KLASCADDKIIKIWDFARCTEDNQLVGHGWDVKCVSWHPQKSLIVSGGKDNNIKIWDAKS 282
Query: 132 GKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLW 191
+ + L H V+ +++N++G IV++S D L ++ D T G L
Sbjct: 283 SQNITTLHGHKSTVSKVEWNQNGNWIVSASSDQLLKVFDIRTMKEMQTFKGHGKEVTALA 342
Query: 192 NYSTRKILKTYSGYTNSK--YCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALD 249
+ + L SG + K Y I + +H V S++ HP +I+ASG+
Sbjct: 343 LHPYHEDLFV-SGDKDGKILYWIVGN-PEPQAEIHSAHDADVWSLSWHPIGHILASGS-- 398
Query: 250 NDRTMKIWTQEK 261
ND T K W++ +
Sbjct: 399 NDHTTKFWSRNR 410
Score = 116 (45.9 bits), Expect = 0.00059, P = 0.00059
Identities = 58/240 (24%), Positives = 104/240 (43%)
Query: 30 KFSHDGRLLTSSSAEKT------LLTYSLSSISNFDSTPPSPLQKFTGHEQGISDLATIR 83
K +DG+ + + KT L+ Y+L+ + D + +Q + + I L I
Sbjct: 46 KIVYDGKRMRKAVVRKTVDFNSTLIKYNLARVYQRDYRDFAVVQPDQLYIREI--LPPIA 103
Query: 84 LWDVPTATSLKTLIGHTN-----Y-VFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKV 137
L P TS+ + HT+ Y + C+++ P+ R+V+ + + +W+ T +
Sbjct: 104 LESNPI-TSVCSRFIHTSSNKVKYPINCVSWTPEGRRLVTGSSSGEFTLWNGLTFNFETI 162
Query: 138 LPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYSTRK 197
L AH V +I ++ + +V+ G + + N K I + +R ++S
Sbjct: 163 LQAHDSAVRSIIWSHNEDWMVSGDDSGNIKYWQPNMNNVK-IFKAHEQSKIRGLSFSPTD 221
Query: 198 ILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDNDRTMKIW 257
LK S + I T +V H V V+ HP K++I SG DN+ +KIW
Sbjct: 222 -LKLASCADDKIIKIWDFARCTEDNQLVGHGWDVKCVSWHPQKSLIVSGGKDNN--IKIW 278
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 193 (73.0 bits), Expect = 7.4e-15, P = 7.4e-15
Identities = 65/254 (25%), Positives = 118/254 (46%)
Query: 18 TLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYS---------LSSISNF-DSTPPS--- 64
TL GH AV + ++ DG +L S+S +KT+ + L ++F +S P+
Sbjct: 104 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRG 163
Query: 65 PLQKFTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETI 124
P TG + G T++LWD+ +++T +T V + FN S++I+S + I
Sbjct: 164 PQLVCTGSDDG-----TVKLWDIRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGGIDNDI 217
Query: 125 RIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDAS--TPNGKFILV- 181
++WD++ K + H+D VT + + +G+ +++++ D R+ D P + + +
Sbjct: 218 KVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIF 277
Query: 182 -GTLDN----TLRL-WNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVA 235
G + N LR W+ KI +G + + T S + H + VA
Sbjct: 278 QGNVHNFEKNLLRCSWSPDGSKIA---AGSADRFVYVWDTTSRRILYKLPGHAGSINEVA 334
Query: 236 SHPAKNIIASGALD 249
HP + II S + D
Sbjct: 335 FHPDEPIIISASSD 348
Score = 128 (50.1 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 47/185 (25%), Positives = 87/185 (47%)
Query: 82 IRLWDV-PTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPA 140
I LW+V + TL GH+ V +++N + + S + ++T+ +WD +TG+ +K L
Sbjct: 90 ILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKG 149
Query: 141 HSDPVTAIDFNRDGTMIV-TSSYDGLYRILDASTPNGKFILVGTLDNTLRL----WNYST 195
H+ V + R G +V T S DG ++ D K + T NT ++ +N ++
Sbjct: 150 HTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIR----KKAAIQTFQNTYQVLAVTFNDTS 205
Query: 196 RKILKTYSGYTNSKYCISSTFSVTNGK--YIV-SHRDPVISVASHPAKNIIASGALDNDR 252
+I+ G N + + K Y + H D V ++ + + S A+DN
Sbjct: 206 DQIIS--GGIDND----IKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDN-- 257
Query: 253 TMKIW 257
T+++W
Sbjct: 258 TVRVW 262
Score = 121 (47.7 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 28/92 (30%), Positives = 46/92 (50%)
Query: 88 PTATSLKT----LIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKC--LKVLPAH 141
P +SL+ L GH V+C F+P + + S F+ I +W++ G C L H
Sbjct: 50 PRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY-GDCDNYATLKGH 108
Query: 142 SDPVTAIDFNRDGTMIVTSSYDGLYRILDAST 173
S V + +N DG+M+ ++S D + D+ T
Sbjct: 109 SGAVMELHYNTDGSMLFSASTDKTVAVWDSET 140
Score = 111 (44.1 bits), Expect = 0.00087, P = 0.00087
Identities = 38/181 (20%), Positives = 77/181 (42%)
Query: 19 LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSL-SSISNFDSTP--PSPLQKFTGHEQG 75
L+GH V KF +G L S+ ++ +L +++ N+ + + + + G
Sbjct: 62 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDG 121
Query: 76 -----ISDLATIRLWDVPTATSLKTLIGHTNYV-FCINFNPQSNRIVSDTFNETIRIWDI 129
S T+ +WD T +K L GHT++V C + + + + T+++WDI
Sbjct: 122 SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDI 181
Query: 130 KTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLR 189
+ ++ ++ V A+ FN I++ D ++ D + + G D+
Sbjct: 182 RKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTG 240
Query: 190 L 190
L
Sbjct: 241 L 241
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 193 (73.0 bits), Expect = 7.5e-15, P = 7.5e-15
Identities = 65/254 (25%), Positives = 118/254 (46%)
Query: 18 TLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYS---------LSSISNF-DSTPPS--- 64
TL GH AV + ++ DG +L S+S +KT+ + L ++F +S P+
Sbjct: 105 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRG 164
Query: 65 PLQKFTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETI 124
P TG + G T++LWD+ +++T +T V + FN S++I+S + I
Sbjct: 165 PQLVCTGSDDG-----TVKLWDIRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGGIDNDI 218
Query: 125 RIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDAS--TPNGKFILV- 181
++WD++ K + H+D VT + + +G+ +++++ D R+ D P + + +
Sbjct: 219 KVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIF 278
Query: 182 -GTLDN----TLRL-WNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVA 235
G + N LR W+ KI +G + + T S + H + VA
Sbjct: 279 QGNVHNFEKNLLRCSWSPDGSKIA---AGSADRFVYVWDTTSRRILYKLPGHAGSINEVA 335
Query: 236 SHPAKNIIASGALD 249
HP + II S + D
Sbjct: 336 FHPDEPIILSASSD 349
Score = 128 (50.1 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 47/185 (25%), Positives = 87/185 (47%)
Query: 82 IRLWDV-PTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPA 140
I LW+V + TL GH+ V +++N + + S + ++T+ +WD +TG+ +K L
Sbjct: 91 ILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKG 150
Query: 141 HSDPVTAIDFNRDGTMIV-TSSYDGLYRILDASTPNGKFILVGTLDNTLRL----WNYST 195
H+ V + R G +V T S DG ++ D K + T NT ++ +N ++
Sbjct: 151 HTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIR----KKAAIQTFQNTYQVLAVTFNDTS 206
Query: 196 RKILKTYSGYTNSKYCISSTFSVTNGK--YIV-SHRDPVISVASHPAKNIIASGALDNDR 252
+I+ G N + + K Y + H D V ++ + + S A+DN
Sbjct: 207 DQIIS--GGIDND----IKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDN-- 258
Query: 253 TMKIW 257
T+++W
Sbjct: 259 TVRVW 263
Score = 121 (47.7 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 28/92 (30%), Positives = 46/92 (50%)
Query: 88 PTATSLKT----LIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKC--LKVLPAH 141
P +SL+ L GH V+C F+P + + S F+ I +W++ G C L H
Sbjct: 51 PRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY-GDCDNYATLKGH 109
Query: 142 SDPVTAIDFNRDGTMIVTSSYDGLYRILDAST 173
S V + +N DG+M+ ++S D + D+ T
Sbjct: 110 SGAVMELHYNTDGSMLFSASTDKTVAVWDSET 141
Score = 111 (44.1 bits), Expect = 0.00088, P = 0.00088
Identities = 38/181 (20%), Positives = 77/181 (42%)
Query: 19 LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSL-SSISNFDSTP--PSPLQKFTGHEQG 75
L+GH V KF +G L S+ ++ +L +++ N+ + + + + G
Sbjct: 63 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDG 122
Query: 76 -----ISDLATIRLWDVPTATSLKTLIGHTNYV-FCINFNPQSNRIVSDTFNETIRIWDI 129
S T+ +WD T +K L GHT++V C + + + + T+++WDI
Sbjct: 123 SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDI 182
Query: 130 KTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLR 189
+ ++ ++ V A+ FN I++ D ++ D + + G D+
Sbjct: 183 RKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTG 241
Query: 190 L 190
L
Sbjct: 242 L 242
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 193 (73.0 bits), Expect = 7.5e-15, P = 7.5e-15
Identities = 65/254 (25%), Positives = 118/254 (46%)
Query: 18 TLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYS---------LSSISNF-DSTPPS--- 64
TL GH AV + ++ DG +L S+S +KT+ + L ++F +S P+
Sbjct: 105 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRG 164
Query: 65 PLQKFTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETI 124
P TG + G T++LWD+ +++T +T V + FN S++I+S + I
Sbjct: 165 PQLVCTGSDDG-----TVKLWDIRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGGIDNDI 218
Query: 125 RIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDAS--TPNGKFILV- 181
++WD++ K + H+D VT + + +G+ +++++ D R+ D P + + +
Sbjct: 219 KVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIF 278
Query: 182 -GTLDN----TLRL-WNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVA 235
G + N LR W+ KI +G + + T S + H + VA
Sbjct: 279 QGNVHNFEKNLLRCSWSPDGSKIA---AGSADRFVYVWDTTSRRILYKLPGHAGSINEVA 335
Query: 236 SHPAKNIIASGALD 249
HP + II S + D
Sbjct: 336 FHPDEPIILSASSD 349
Score = 128 (50.1 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 47/185 (25%), Positives = 87/185 (47%)
Query: 82 IRLWDV-PTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPA 140
I LW+V + TL GH+ V +++N + + S + ++T+ +WD +TG+ +K L
Sbjct: 91 ILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKG 150
Query: 141 HSDPVTAIDFNRDGTMIV-TSSYDGLYRILDASTPNGKFILVGTLDNTLRL----WNYST 195
H+ V + R G +V T S DG ++ D K + T NT ++ +N ++
Sbjct: 151 HTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIR----KKAAIQTFQNTYQVLAVTFNDTS 206
Query: 196 RKILKTYSGYTNSKYCISSTFSVTNGK--YIV-SHRDPVISVASHPAKNIIASGALDNDR 252
+I+ G N + + K Y + H D V ++ + + S A+DN
Sbjct: 207 DQIIS--GGIDND----IKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDN-- 258
Query: 253 TMKIW 257
T+++W
Sbjct: 259 TVRVW 263
Score = 121 (47.7 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 28/92 (30%), Positives = 46/92 (50%)
Query: 88 PTATSLKT----LIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKC--LKVLPAH 141
P +SL+ L GH V+C F+P + + S F+ I +W++ G C L H
Sbjct: 51 PRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY-GDCDNYATLKGH 109
Query: 142 SDPVTAIDFNRDGTMIVTSSYDGLYRILDAST 173
S V + +N DG+M+ ++S D + D+ T
Sbjct: 110 SGAVMELHYNTDGSMLFSASTDKTVAVWDSET 141
Score = 111 (44.1 bits), Expect = 0.00088, P = 0.00088
Identities = 38/181 (20%), Positives = 77/181 (42%)
Query: 19 LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSL-SSISNFDSTP--PSPLQKFTGHEQG 75
L+GH V KF +G L S+ ++ +L +++ N+ + + + + G
Sbjct: 63 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDG 122
Query: 76 -----ISDLATIRLWDVPTATSLKTLIGHTNYV-FCINFNPQSNRIVSDTFNETIRIWDI 129
S T+ +WD T +K L GHT++V C + + + + T+++WDI
Sbjct: 123 SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDI 182
Query: 130 KTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLR 189
+ ++ ++ V A+ FN I++ D ++ D + + G D+
Sbjct: 183 RKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTG 241
Query: 190 L 190
L
Sbjct: 242 L 242
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 193 (73.0 bits), Expect = 7.5e-15, P = 7.5e-15
Identities = 65/254 (25%), Positives = 118/254 (46%)
Query: 18 TLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYS---------LSSISNF-DSTPPS--- 64
TL GH AV + ++ DG +L S+S +KT+ + L ++F +S P+
Sbjct: 105 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRG 164
Query: 65 PLQKFTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETI 124
P TG + G T++LWD+ +++T +T V + FN S++I+S + I
Sbjct: 165 PQLVCTGSDDG-----TVKLWDIRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGGIDNDI 218
Query: 125 RIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDAS--TPNGKFILV- 181
++WD++ K + H+D VT + + +G+ +++++ D R+ D P + + +
Sbjct: 219 KVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIF 278
Query: 182 -GTLDN----TLRL-WNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVA 235
G + N LR W+ KI +G + + T S + H + VA
Sbjct: 279 QGNVHNFEKNLLRCSWSPDGSKIA---AGSADRFVYVWDTTSRRILYKLPGHAGSINEVA 335
Query: 236 SHPAKNIIASGALD 249
HP + II S + D
Sbjct: 336 FHPDEPIILSASSD 349
Score = 128 (50.1 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 47/185 (25%), Positives = 87/185 (47%)
Query: 82 IRLWDV-PTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPA 140
I LW+V + TL GH+ V +++N + + S + ++T+ +WD +TG+ +K L
Sbjct: 91 ILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKG 150
Query: 141 HSDPVTAIDFNRDGTMIV-TSSYDGLYRILDASTPNGKFILVGTLDNTLRL----WNYST 195
H+ V + R G +V T S DG ++ D K + T NT ++ +N ++
Sbjct: 151 HTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIR----KKAAIQTFQNTYQVLAVTFNDTS 206
Query: 196 RKILKTYSGYTNSKYCISSTFSVTNGK--YIV-SHRDPVISVASHPAKNIIASGALDNDR 252
+I+ G N + + K Y + H D V ++ + + S A+DN
Sbjct: 207 DQIIS--GGIDND----IKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDN-- 258
Query: 253 TMKIW 257
T+++W
Sbjct: 259 TVRVW 263
Score = 121 (47.7 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 28/92 (30%), Positives = 46/92 (50%)
Query: 88 PTATSLKT----LIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKC--LKVLPAH 141
P +SL+ L GH V+C F+P + + S F+ I +W++ G C L H
Sbjct: 51 PRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY-GDCDNYATLKGH 109
Query: 142 SDPVTAIDFNRDGTMIVTSSYDGLYRILDAST 173
S V + +N DG+M+ ++S D + D+ T
Sbjct: 110 SGAVMELHYNTDGSMLFSASTDKTVAVWDSET 141
Score = 111 (44.1 bits), Expect = 0.00088, P = 0.00088
Identities = 38/181 (20%), Positives = 77/181 (42%)
Query: 19 LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSL-SSISNFDSTP--PSPLQKFTGHEQG 75
L+GH V KF +G L S+ ++ +L +++ N+ + + + + G
Sbjct: 63 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDG 122
Query: 76 -----ISDLATIRLWDVPTATSLKTLIGHTNYV-FCINFNPQSNRIVSDTFNETIRIWDI 129
S T+ +WD T +K L GHT++V C + + + + T+++WDI
Sbjct: 123 SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDI 182
Query: 130 KTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLR 189
+ ++ ++ V A+ FN I++ D ++ D + + G D+
Sbjct: 183 RKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTG 241
Query: 190 L 190
L
Sbjct: 242 L 242
>ASPGD|ASPL0000031743 [details] [associations]
symbol:AN8505 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001305 ProteinModelPortal:C8VEM4
EnsemblFungi:CADANIAT00002997 HOGENOM:HOG000234485 OMA:WDAQTGS
Uniprot:C8VEM4
Length = 954
Score = 201 (75.8 bits), Expect = 7.6e-15, P = 7.6e-15
Identities = 61/171 (35%), Positives = 88/171 (51%)
Query: 2 SSDRSLESFRPYT--LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTL---------LTY 50
S D ++ + P T L QTL GH V V FS DGRLL S S +KT+ L
Sbjct: 714 SDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQ 773
Query: 51 SLSSISNF-DSTPPSPLQKFTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFN 109
+L SN+ S SP + G D T+RLWD T + +TL GH++ V + F+
Sbjct: 774 TLRGHSNWVRSVAFSPDGRLLA--SGSFD-KTVRLWDPATGSLQQTLRGHSDTVRSVAFS 830
Query: 110 PQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTS 160
P + S +F++T+R+WD TG + L VT + F++DG+ I T+
Sbjct: 831 PDGRLLASGSFDKTVRLWDPATGTLQQTLIIKGT-VTELQFSQDGSYISTN 880
Score = 199 (75.1 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 57/174 (32%), Positives = 85/174 (48%)
Query: 17 QTLNGHLRAVSYVKFS-HDGRLLTSSSAEKTLLTYSLSSISNFD-STPPSPLQKFTGHEQ 74
QTL GH +V V S D + L +L S + S SP +
Sbjct: 697 QTLEGHSNSVWAVLASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSPDGRLLA--S 754
Query: 75 GISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKC 134
G D T+RLWD T + +TL GH+N+V + F+P + S +F++T+R+WD TG
Sbjct: 755 GSFD-KTVRLWDPATGSLQQTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWDPATGSL 813
Query: 135 LKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTL 188
+ L HSD V ++ F+ DG ++ + S+D R+ D +T GTL TL
Sbjct: 814 QQTLRGHSDTVRSVAFSPDGRLLASGSFDKTVRLWDPAT--------GTLQQTL 859
Score = 159 (61.0 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 49/166 (29%), Positives = 87/166 (52%)
Query: 93 LKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNR 152
L+TL GH+N V+ + + S + +ET+R+WD TG + L HS V ++ F+
Sbjct: 696 LQTLEGHSNSVWAV--------LASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSP 747
Query: 153 DGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYSTR-KILKTYSGYTNSKYC 211
DG ++ + S+D R+ D +T + + L G N +R +S ++L + S +
Sbjct: 748 DGRLLASGSFDKTVRLWDPATGSLQQTLRGH-SNWVRSVAFSPDGRLLASGSFDKTVRLW 806
Query: 212 ISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDNDRTMKIW 257
+T S+ + + H D V SVA P ++ASG+ D +T+++W
Sbjct: 807 DPATGSLQ--QTLRGHSDTVRSVAFSPDGRLLASGSFD--KTVRLW 848
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 194 (73.4 bits), Expect = 8.8e-15, P = 8.8e-15
Identities = 66/259 (25%), Positives = 111/259 (42%)
Query: 11 RPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTY--SLSSISNFDSTPPSPLQK 68
+P + GH AV+ V FS G LL S S +KT+ + ++ S + ++
Sbjct: 49 KPQSRAYRFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWIPNVKGESTVFRAHTATVRS 108
Query: 69 --FTGHEQGI---SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNET 123
F Q + SD T+++W L +L H N+V C F+P IVS + ++T
Sbjct: 109 VHFCSDGQSLVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKT 168
Query: 124 IRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPN--GKFILV 181
+++WD + +C+ H VT +DF+ GT I +S D ++ D T + L
Sbjct: 169 VKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLH 228
Query: 182 GTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVS---HRDPVISVASHP 238
N L + + L T S + K + G+ + + H+ P +VA
Sbjct: 229 SAAVNALSF--HPSGNYLLTASSDSTLKI-----LDLMEGRLLYTLHGHQGPATTVAFSR 281
Query: 239 AKNIIASGALDNDRTMKIW 257
ASG +D + +W
Sbjct: 282 TGEYFASGG--SDEQVMVW 298
Score = 172 (65.6 bits), Expect = 6.3e-11, P = 6.3e-11
Identities = 57/240 (23%), Positives = 107/240 (44%)
Query: 2 SSDRSLESFRPYTLTQT--LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYS------LS 53
S D+++ + P ++ H V V F DG+ L ++S +KT+ +S L
Sbjct: 80 SRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQKFLF 139
Query: 54 SISNFDSTPPSPLQKFTGHE-QGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQS 112
S+S + G SD T++LWD + + + H +V ++F+P
Sbjct: 140 SLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSG 199
Query: 113 NRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDAS 172
I + + + T+++WD++T + L+ HS V A+ F+ G ++T+S D +ILD
Sbjct: 200 TCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLLTASSDSTLKILDLM 259
Query: 173 TPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCI-SSTFSVTNGKYIVS-HRDP 230
+ L G + T + SG ++ + + S F V + + ++ HR P
Sbjct: 260 EGRLLYTLHGHQGPATTVAFSRTGEYFA--SGGSDEQVMVWKSNFDVVDYREVIKVHRPP 317
Score = 150 (57.9 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 51/181 (28%), Positives = 88/181 (48%)
Query: 82 IRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIW--DIKTGKCLKVLP 139
+ +W + + GH + V C+NF+P + + S + ++T+RIW ++K G+ V
Sbjct: 43 LMVWHMKPQSRAYRFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWIPNVK-GEST-VFR 100
Query: 140 AHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFIL-VGTLDNTLRLWNYST--R 196
AH+ V ++ F DG +VT+S D ++ ST KF+ + N +R +S R
Sbjct: 101 AHTATVRSVHFCSDGQSLVTASDDKTVKVW--STHRQKFLFSLSQHINWVRCARFSPDGR 158
Query: 197 KILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDNDRTMKI 256
I+ T + +S V + Y H V V HP+ IA+ ++DN T+K+
Sbjct: 159 LIVSASDDKTVKLWDKTSRECVHS--YC-EHGGFVTYVDFHPSGTCIAAASMDN--TVKV 213
Query: 257 W 257
W
Sbjct: 214 W 214
Score = 126 (49.4 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 43/169 (25%), Positives = 78/169 (46%)
Query: 14 TLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISN---FDSTPPS-PLQKF 69
+L + GH A++ V FS + + L S S + L+ + + S F + F
Sbjct: 10 SLERHFKGHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNF 69
Query: 70 T--GH--EQGISDLATIRLWDVPTATSLKTLI-GHTNYVFCINFNPQSNRIVSDTFNETI 124
+ GH G D T+R+W +P T+ HT V ++F +V+ + ++T+
Sbjct: 70 SPSGHLLASGSRD-KTVRIW-IPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTV 127
Query: 125 RIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDAST 173
++W K L L H + V F+ DG +IV++S D ++ D ++
Sbjct: 128 KVWSTHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTS 176
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 180 (68.4 bits), Expect = 9.3e-15, Sum P(2) = 9.3e-15
Identities = 49/171 (28%), Positives = 82/171 (47%)
Query: 7 LESFRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTY---SLSSISNFDS-TP 62
L +F+P+ GH V+ V+FS G LL S+S ++T+ + S F + T
Sbjct: 2 LWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTA 61
Query: 63 PSPLQKFTGHEQGI---SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDT 119
P F+ Q + S+ +I++W + L +L HT++V C F+P IVS +
Sbjct: 62 PVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCS 121
Query: 120 FNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
++TI+IWD +C+ +DFN GT I ++ D ++ D
Sbjct: 122 EDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWD 172
Score = 180 (68.4 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 47/171 (27%), Positives = 85/171 (49%)
Query: 2 SSDRSLESFRPYT--LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS---IS 56
S D+S++ + Y +L H V KFS DGRL+ S S +KT+ + ++ ++
Sbjct: 79 SEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVN 138
Query: 57 NF-DSTPPSPLQKFTGHEQGISDLA---TIRLWDVPTATSLKTLIGHTNYVFCINFNPQS 112
NF DS + F I+ T+++WDV L+ H+ V CI+F+P
Sbjct: 139 NFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSG 198
Query: 113 NRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYD 163
N +++ + + T++I D+ G+ + L H+ PV + F++ G + + D
Sbjct: 199 NYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGAD 249
Score = 177 (67.4 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 44/156 (28%), Positives = 75/156 (48%)
Query: 22 HLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS----ISNFDSTPPSPLQKFTGHEQGI- 76
H V V FS DG+ L ++S +K++ +S+ S + T KF+ + I
Sbjct: 59 HTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIV 118
Query: 77 --SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKC 134
S+ TI++WD + + ++FNP I S ++T+++WD++ K
Sbjct: 119 SCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKL 178
Query: 135 LKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
L+ HS V I F+ G ++T+S DG +ILD
Sbjct: 179 LQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILD 214
Score = 133 (51.9 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 51/185 (27%), Positives = 89/185 (48%)
Query: 84 LWDV-PTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIW-DIKTGKCLKVLPAH 141
LW+ P A + + +GH + V + F+P N + S + + T+R+W K GK AH
Sbjct: 2 LWNFKPHARAYR-YVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGK-FSEFKAH 59
Query: 142 SDPVTAIDFNRDGTMIVTSSYD------GLYR--ILDASTPNGKFILVGTLDNTLRLW-N 192
+ PV ++DF+ DG + T+S D +YR L + + ++ RL +
Sbjct: 60 TAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVS 119
Query: 193 YSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDNDR 252
S K +K + T +K C+++ FS + G + D +P+ IAS +D+
Sbjct: 120 CSEDKTIKIWD--TTNKQCVNN-FSDSVG--FANFVD------FNPSGTCIASAG--SDQ 166
Query: 253 TMKIW 257
T+K+W
Sbjct: 167 TVKVW 171
Score = 59 (25.8 bits), Expect = 9.3e-15, Sum P(2) = 9.3e-15
Identities = 9/40 (22%), Positives = 23/40 (57%)
Query: 174 PNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCIS 213
P+G +++ + D TL++ + +++ T G+T + +S
Sbjct: 196 PSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVS 235
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 192 (72.6 bits), Expect = 9.7e-15, P = 9.7e-15
Identities = 65/254 (25%), Positives = 118/254 (46%)
Query: 18 TLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYS---------LSSISNF-DSTPPS--- 64
TL GH AV + ++ DG +L S+S +KT+ + L ++F +S P+
Sbjct: 105 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRG 164
Query: 65 PLQKFTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETI 124
P TG + G T++LWD+ +++T +T V + FN S++I+S + I
Sbjct: 165 PQLVCTGSDDG-----TVKLWDIRKKAAVQTF-QNTYQVLAVTFNDTSDQIISGGIDNDI 218
Query: 125 RIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDAS--TPNGKFILV- 181
++WD++ K + H+D VT + + +G+ +++++ D R+ D P + + +
Sbjct: 219 KVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIF 278
Query: 182 -GTLDN----TLRL-WNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVA 235
G + N LR W+ KI +G + + T S + H + VA
Sbjct: 279 QGNVHNFEKNLLRCSWSPDGSKIA---AGSADRFVYVWDTTSRRVLYKLPGHAGSINEVA 335
Query: 236 SHPAKNIIASGALD 249
HP + II S + D
Sbjct: 336 FHPDEPIILSASSD 349
Score = 129 (50.5 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 48/185 (25%), Positives = 87/185 (47%)
Query: 82 IRLWDV-PTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPA 140
I LW+V + TL GH+ V +++N + + S + ++T+ +WD +TG+ +K L
Sbjct: 91 ILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKG 150
Query: 141 HSDPVTAIDFNRDGTMIV-TSSYDGLYRILDASTPNGKFILVGTLDNTLRL----WNYST 195
H+ V + R G +V T S DG ++ D K V T NT ++ +N ++
Sbjct: 151 HTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIR----KKAAVQTFQNTYQVLAVTFNDTS 206
Query: 196 RKILKTYSGYTNSKYCISSTFSVTNGK--YIV-SHRDPVISVASHPAKNIIASGALDNDR 252
+I+ G N + + K Y + H D V ++ + + S A+DN
Sbjct: 207 DQIIS--GGIDND----IKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDN-- 258
Query: 253 TMKIW 257
T+++W
Sbjct: 259 TVRVW 263
Score = 121 (47.7 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 28/92 (30%), Positives = 46/92 (50%)
Query: 88 PTATSLKT----LIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKC--LKVLPAH 141
P +SL+ L GH V+C F+P + + S F+ I +W++ G C L H
Sbjct: 51 PRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY-GDCDNYATLKGH 109
Query: 142 SDPVTAIDFNRDGTMIVTSSYDGLYRILDAST 173
S V + +N DG+M+ ++S D + D+ T
Sbjct: 110 SGAVMELHYNTDGSMLFSASTDKTVAVWDSET 141
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 173 (66.0 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 48/172 (27%), Positives = 80/172 (46%)
Query: 9 SFRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTY--SLSSISNFDSTPPSPL 66
+ +P + GH AV+ V+FS LL SSS +KT+ + S+ S +
Sbjct: 46 NMKPQSRAYRFTGHKDAVTCVQFSPSAHLLASSSRDKTVRLWVPSVKGESVLFRAHTGSV 105
Query: 67 QK--FTGHEQGI---SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFN 121
+ F+ Q + SD +I+LW V + TL H N+V C F+P +VS + +
Sbjct: 106 RSVCFSADGQSLLTASDDQSIKLWSVHRQKIICTLREHNNWVRCARFSPDGQLMVSVSDD 165
Query: 122 ETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDAST 173
T+++WD + + + + +DF+ T I T+S D R+ D T
Sbjct: 166 RTVKLWDASSRQLIHTFCEPGGYSSYVDFHPSSTCIATASSDNTVRVWDIRT 217
Score = 167 (63.8 bits), Expect = 8.6e-14, Sum P(2) = 8.6e-14
Identities = 47/178 (26%), Positives = 88/178 (49%)
Query: 2 SSDRSLESFRPYTLTQTL--NGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS---IS 56
S D+++ + P +++ H +V V FS DG+ L ++S ++++ +S+ I
Sbjct: 79 SRDKTVRLWVPSVKGESVLFRAHTGSVRSVCFSADGQSLLTASDDQSIKLWSVHRQKIIC 138
Query: 57 NF-DSTPPSPLQKFTGHEQ---GISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQS 112
+ +F+ Q +SD T++LWD + + T Y ++F+P S
Sbjct: 139 TLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEPGGYSSYVDFHPSS 198
Query: 113 NRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
I + + + T+R+WDI+T L+ HS V A+ F+ G ++T+S D +ILD
Sbjct: 199 TCIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNALSFHPSGNHLLTASSDSTLKILD 256
Score = 158 (60.7 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 43/171 (25%), Positives = 80/171 (46%)
Query: 2 SSDRSLE--SFRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFD 59
S D+S++ S + TL H V +FS DG+L+ S S ++T+ + SS
Sbjct: 121 SDDQSIKLWSVHRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIH 180
Query: 60 S-TPPSPLQKFTGHEQGISDLAT------IRLWDVPTATSLKTLIGHTNYVFCINFNPQS 112
+ P + + +AT +R+WD+ T T L+ H+ V ++F+P
Sbjct: 181 TFCEPGGYSSYVDFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNALSFHPSG 240
Query: 113 NRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYD 163
N +++ + + T++I D+ G+ L L H + + F+R G ++ D
Sbjct: 241 NHLLTASSDSTLKILDLLEGRLLYTLHGHQGSASCVSFSRSGDQFASAGSD 291
Score = 150 (57.9 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 62/261 (23%), Positives = 118/261 (45%)
Query: 14 TLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGHE 73
TL + GH A++ + FS G+ + S S + +++ +++ P S +FTGH+
Sbjct: 9 TLERNFKGHRDAITSLDFSPSGKQIASGSVDASVMVWNMK--------PQSRAYRFTGHK 60
Query: 74 QGISD---------LA------TIRLWDVPTATSLKTLI-GHTNYVFCINFNPQSNRIVS 117
++ LA T+RLW VP+ L HT V + F+ +++
Sbjct: 61 DAVTCVQFSPSAHLLASSSRDKTVRLW-VPSVKGESVLFRAHTGSVRSVCFSADGQSLLT 119
Query: 118 DTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPN-- 175
+ +++I++W + K + L H++ V F+ DG ++V+ S D ++ DAS+
Sbjct: 120 ASDDQSIKLWSVHRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLI 179
Query: 176 GKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVA 235
F G + + ST + T S + T ++ Y V H V +++
Sbjct: 180 HTFCEPGGYSSYVDFHPSST--CIATASSDNTVRVWDIRTHTLLQ-HYQV-HSAAVNALS 235
Query: 236 SHPAKNIIASGALDNDRTMKI 256
HP+ N + + + +D T+KI
Sbjct: 236 FHPSGNHLLTAS--SDSTLKI 254
Score = 123 (48.4 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 41/181 (22%), Positives = 88/181 (48%)
Query: 80 ATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVL- 138
A++ +W++ + GH + V C+ F+P ++ + S + ++T+R+W + + K VL
Sbjct: 40 ASVMVWNMKPQSRAYRFTGHKDAVTCVQFSPSAHLLASSSRDKTVRLW-VPSVKGESVLF 98
Query: 139 PAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFIL-VGTLDNTLRLWNYSTR- 196
AH+ V ++ F+ DG ++T+S D ++ S K I + +N +R +S
Sbjct: 99 RAHTGSVRSVCFSADGQSLLTASDDQSIKLW--SVHRQKIICTLREHNNWVRCARFSPDG 156
Query: 197 KILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDNDRTMKI 256
+++ + S K +S+ + + + HP+ IA+ + DN T+++
Sbjct: 157 QLMVSVSDDRTVKLWDASSRQLIHTFCEPGGYSSYVDF--HPSSTCIATASSDN--TVRV 212
Query: 257 W 257
W
Sbjct: 213 W 213
Score = 112 (44.5 bits), Expect = 0.00087, P = 0.00087
Identities = 42/176 (23%), Positives = 78/176 (44%)
Query: 86 DVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPV 145
D PT + GH + + ++F+P +I S + + ++ +W++K H D V
Sbjct: 6 DDPTLE--RNFKGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAV 63
Query: 146 TAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYSTR-KILKTYSG 204
T + F+ ++ +SS D R+ S G+ +L ++R +S + L T S
Sbjct: 64 TCVQFSPSAHLLASSSRDKTVRLWVPSV-KGESVLFRAHTGSVRSVCFSADGQSLLTASD 122
Query: 205 YTNSKYCISSTFSVTNGKYIVS---HRDPVISVASHPAKNIIASGALDNDRTMKIW 257
+ K +SV K I + H + V P ++ S + +DRT+K+W
Sbjct: 123 DQSIKL-----WSVHRQKIICTLREHNNWVRCARFSPDGQLMVS--VSDDRTVKLW 171
Score = 68 (29.0 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 16/61 (26%), Positives = 32/61 (52%)
Query: 174 PNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVIS 233
P+G +L + D+TL++ + ++L T G+ S C+S FS + ++ + D +
Sbjct: 238 PSGNHLLTASSDSTLKILDLLEGRLLYTLHGHQGSASCVS--FSRSGDQFASAGSDQQVM 295
Query: 234 V 234
V
Sbjct: 296 V 296
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 180 (68.4 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 49/171 (28%), Positives = 82/171 (47%)
Query: 7 LESFRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTY---SLSSISNFDS-TP 62
L +F+P+ GH V+ V+FS G LL S+S ++T+ + S F + T
Sbjct: 44 LWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTA 103
Query: 63 PSPLQKFTGHEQGI---SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDT 119
P F+ Q + S+ +I++W + L +L HT++V C F+P IVS +
Sbjct: 104 PVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCS 163
Query: 120 FNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
++TI+IWD +C+ +DFN GT I ++ D ++ D
Sbjct: 164 EDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWD 214
Score = 180 (68.4 bits), Expect = 7.9e-12, P = 7.9e-12
Identities = 47/171 (27%), Positives = 85/171 (49%)
Query: 2 SSDRSLESFRPYT--LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS---IS 56
S D+S++ + Y +L H V KFS DGRL+ S S +KT+ + ++ ++
Sbjct: 121 SEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVN 180
Query: 57 NF-DSTPPSPLQKFTGHEQGISDLA---TIRLWDVPTATSLKTLIGHTNYVFCINFNPQS 112
NF DS + F I+ T+++WDV L+ H+ V CI+F+P
Sbjct: 181 NFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSG 240
Query: 113 NRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYD 163
N +++ + + T++I D+ G+ + L H+ PV + F++ G + + D
Sbjct: 241 NYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGAD 291
Score = 177 (67.4 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 44/156 (28%), Positives = 75/156 (48%)
Query: 22 HLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS----ISNFDSTPPSPLQKFTGHEQGI- 76
H V V FS DG+ L ++S +K++ +S+ S + T KF+ + I
Sbjct: 101 HTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIV 160
Query: 77 --SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKC 134
S+ TI++WD + + ++FNP I S ++T+++WD++ K
Sbjct: 161 SCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKL 220
Query: 135 LKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
L+ HS V I F+ G ++T+S DG +ILD
Sbjct: 221 LQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILD 256
Score = 134 (52.2 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 51/187 (27%), Positives = 90/187 (48%)
Query: 82 IRLWDV-PTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIW-DIKTGKCLKVLP 139
+ LW+ P A + + +GH + V + F+P N + S + + T+R+W K GK
Sbjct: 42 LMLWNFKPHARAYR-YVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGK-FSEFK 99
Query: 140 AHSDPVTAIDFNRDGTMIVTSSYD------GLYR--ILDASTPNGKFILVGTLDNTLRLW 191
AH+ PV ++DF+ DG + T+S D +YR L + + ++ RL
Sbjct: 100 AHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLI 159
Query: 192 -NYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDN 250
+ S K +K + T +K C+++ FS + G + D +P+ IAS +
Sbjct: 160 VSCSEDKTIKIWD--TTNKQCVNN-FSDSVG--FANFVD------FNPSGTCIASAG--S 206
Query: 251 DRTMKIW 257
D+T+K+W
Sbjct: 207 DQTVKVW 213
Score = 59 (25.8 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 9/40 (22%), Positives = 23/40 (57%)
Query: 174 PNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCIS 213
P+G +++ + D TL++ + +++ T G+T + +S
Sbjct: 238 PSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVS 277
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 192 (72.6 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 66/259 (25%), Positives = 109/259 (42%)
Query: 11 RPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTY--SLSSISNFDSTPPSPLQK 68
+P T GH AV+ V FS G LL S S +KT+ + ++ S + ++
Sbjct: 49 KPQTRAYRFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRS 108
Query: 69 --FTGHEQGI---SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNET 123
F Q SD T+++W L +L H N+V C F+P IVS + ++T
Sbjct: 109 VHFCSDGQSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKT 168
Query: 124 IRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPN--GKFILV 181
+++WD + +C+ H VT +DF+ GT I + D ++ D T + L
Sbjct: 169 VKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLH 228
Query: 182 GTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVS---HRDPVISVASHP 238
N L + + L T S + K + G+ + + H+ P +VA
Sbjct: 229 SAAVNALSF--HPSGNYLVTASSDSTLKI-----LDLMEGRLLYTLHGHQGPATTVAFSR 281
Query: 239 AKNIIASGALDNDRTMKIW 257
ASG +D + +W
Sbjct: 282 TGEYFASGG--SDEQVMVW 298
Score = 169 (64.5 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 48/180 (26%), Positives = 87/180 (48%)
Query: 2 SSDRSLESFRPYTLTQT--LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYS------LS 53
S D+++ + P ++ H V V F DG+ ++S +KT+ +S L
Sbjct: 80 SRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWSTHRQKFLF 139
Query: 54 SISNFDSTPPSPLQKFTGHEQGI---SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNP 110
S+S + KF+ + I SD T++LWD + + + H +V ++F+P
Sbjct: 140 SLSQHINWVRCA--KFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHP 197
Query: 111 QSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
I + + T+++WD++T + L+ HS V A+ F+ G +VT+S D +ILD
Sbjct: 198 SGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILD 257
Score = 151 (58.2 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 52/181 (28%), Positives = 86/181 (47%)
Query: 82 IRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIW--DIKTGKCLKVLP 139
+ +W + T GH + V C+NF+P + + S + ++T+RIW ++K G+ V
Sbjct: 43 LMVWHMKPQTRAYRFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVK-GEST-VFR 100
Query: 140 AHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFIL-VGTLDNTLRLWNYST--R 196
AH+ V ++ F DG VT+S D ++ ST KF+ + N +R +S R
Sbjct: 101 AHTATVRSVHFCSDGQSFVTASDDKTVKVW--STHRQKFLFSLSQHINWVRCAKFSPDGR 158
Query: 197 KILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDNDRTMKI 256
I+ T + +S V + Y H V V HP+ IA+ +DN T+K+
Sbjct: 159 LIVSASDDKTVKLWDKTSRECVHS--YC-EHGGFVTYVDFHPSGTCIAAAGMDN--TVKV 213
Query: 257 W 257
W
Sbjct: 214 W 214
Score = 124 (48.7 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 44/169 (26%), Positives = 77/169 (45%)
Query: 14 TLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISN---FDSTPPS-PLQKF 69
+L + GH AV+ V FS + + L S S + L+ + + + F + F
Sbjct: 10 SLERHFKGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNF 69
Query: 70 T--GH--EQGISDLATIRLWDVPTATSLKTLI-GHTNYVFCINFNPQSNRIVSDTFNETI 124
+ GH G D T+R+W VP T+ HT V ++F V+ + ++T+
Sbjct: 70 SPSGHLLASGSRD-KTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTV 127
Query: 125 RIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDAST 173
++W K L L H + V F+ DG +IV++S D ++ D ++
Sbjct: 128 KVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTS 176
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 191 (72.3 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 67/269 (24%), Positives = 113/269 (42%)
Query: 1 MSSDRSLESFRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTY--SLSSISNF 58
M S + +P + GH AV+ V FS G LL S S +KT+ + ++ S
Sbjct: 39 MDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTV 98
Query: 59 DSTPPSPLQK--FTGHEQGI---SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSN 113
+ ++ F Q + SD T+++W L +L H N+V C F+P
Sbjct: 99 FRAHTATVRSVHFCSDGQLLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGR 158
Query: 114 RIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDAST 173
IVS + ++T+++WD + +C+ H VT +DF+ GT I + D ++ D T
Sbjct: 159 LIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRT 218
Query: 174 PN--GKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVS---HR 228
+ L N L + + L T S + K + G+ + + H+
Sbjct: 219 HRLVQHYQLHSAAVNALSF--HPSGNYLITASSDSTLKI-----LDLMEGRLLYTLHGHQ 271
Query: 229 DPVISVASHPAKNIIASGALDNDRTMKIW 257
P +VA ASG +D + +W
Sbjct: 272 GPATTVAFSRTGEYFASGG--SDEQVMVW 298
Score = 133 (51.9 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 46/176 (26%), Positives = 82/176 (46%)
Query: 14 TLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGHE 73
+L + GH AV+ V FS + + L S S + TL+ + + P S +FTGH+
Sbjct: 10 SLERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMK--------PQSRAYRFTGHK 61
Query: 74 QGISD---------LA------TIRLWDVPTATSLKTLI-GHTNYVFCINFNPQSNRIVS 117
++ LA T+R+W VP T+ HT V ++F +V+
Sbjct: 62 DAVTCVNFSPSGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQLLVT 120
Query: 118 DTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDAST 173
+ ++T+++W + L L H + V F+ DG +IV++S D ++ D ++
Sbjct: 121 ASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTS 176
Score = 117 (46.2 bits), Expect = 0.00015, P = 0.00015
Identities = 41/163 (25%), Positives = 73/163 (44%)
Query: 98 GHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMI 157
GH + V C++F+ + + S + + T+ IW +K H D VT ++F+ G ++
Sbjct: 17 GHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLL 76
Query: 158 VTSSYDGLYRILDASTPN--GKFILVGTLDNTLRLWNY-STRKILKTYSGYTNSKYCISS 214
+ S D RI PN G+ + T+R ++ S ++L T S K + S
Sbjct: 77 ASGSRDKTVRIW---VPNVKGESTVFRAHTATVRSVHFCSDGQLLVTASDDKTVK--VWS 131
Query: 215 TFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDNDRTMKIW 257
T + H + V P +I S + +D+T+K+W
Sbjct: 132 THRQRFLFSLTQHINWVRCAKFSPDGRLIVSAS--DDKTVKLW 172
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 192 (72.6 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 52/169 (30%), Positives = 85/169 (50%)
Query: 48 LTYSLSSISNFDSTPP-SPLQKFTGHEQ--GISDLATIRLWDVPTATSLKTLIGHTNYVF 104
+T S S+I+ ST S T G D T R+WD T T + TL GH N+V
Sbjct: 132 VTRSSSAIAGHGSTILCSAFAPHTSSRMVTGAGD-NTARIWDCDTQTPMHTLKGHYNWVL 190
Query: 105 CINFNPQSNRIVSDTFNETIRIWDIKTGKCL-KVLPAHSDPVTAIDFNRDGTMIVTSSYD 163
C++++P I + + + TIR+WD K+G+CL L HS +T++ S++
Sbjct: 191 CVSWSPDGEVIATGSMDNTIRLWDPKSGQCLGDALRGHSKWITSL------------SWE 238
Query: 164 GLYRILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCI 212
++ + S P + + D T+++W+ +R T SG+TNS C+
Sbjct: 239 PIHLVKPGSKPR---LASSSKDGTIKIWDTVSRVCQYTMSGHTNSVSCV 284
Score = 159 (61.0 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 67/266 (25%), Positives = 121/266 (45%)
Query: 14 TLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS--------------ISNFD 59
T TL GH V V +S DG ++ + S + T+ + S I++
Sbjct: 177 TPMHTLKGHYNWVLCVSWSPDGEVIATGSMDNTIRLWDPKSGQCLGDALRGHSKWITSL- 235
Query: 60 STPPSPLQKFTGHEQGISDLA---TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIV 116
S P L K G + ++ + TI++WD + T+ GHTN V C+ + Q +
Sbjct: 236 SWEPIHLVK-PGSKPRLASSSKDGTIKIWDTVSRVCQYTMSGHTNSVSCVKWGGQG-LLY 293
Query: 117 SDTFNETIRIWDIKT-GKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPN 175
S + + T+R+WDI + G+C+ +L +H+ V + + D + + ++D + STP
Sbjct: 294 SGSHDRTVRVWDINSQGRCINILKSHAHWVNHLSLSTDYALRI-GAFDHTGK--KPSTPE 350
Query: 176 GKFILVGTLDNTLRLW--NYSTRKILKTYSG-YTNSKYC-ISSTFSVTNGKYIVSHRDPV 231
L+N ++ N ++ +++ T S YT + + ST + + H+ V
Sbjct: 351 EA--QKKALENYEKICKKNGNSEEMMVTASDDYTMFLWNPLKSTKPIAR---MTGHQKLV 405
Query: 232 ISVASHPAKNIIASGALDNDRTMKIW 257
VA P I S + DN ++K+W
Sbjct: 406 NHVAFSPDGRYIVSASFDN--SIKLW 429
Score = 132 (51.5 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 25/88 (28%), Positives = 47/88 (53%)
Query: 81 TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPA 140
+I+LWD + T GH V+ + ++ +VS + + T+++WD++T K LP
Sbjct: 425 SIKLWDGRDGKFISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVWDVRTRKLSVDLPG 484
Query: 141 HSDPVTAIDFNRDGTMIVTSSYDGLYRI 168
H D V +D++ DG + + D + R+
Sbjct: 485 HKDEVYTVDWSVDGKRVCSGGKDKMVRL 512
Score = 127 (49.8 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 32/124 (25%), Positives = 59/124 (47%)
Query: 77 SDLATIRLWDVPTATS-LKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCL 135
SD T+ LW+ +T + + GH V + F+P IVS +F+ +I++WD + GK +
Sbjct: 378 SDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAFSPDGRYIVSASFDNSIKLWDGRDGKFI 437
Query: 136 KVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRL-WNYS 194
H V + ++ D ++V+ S D ++ D T L G D + W+
Sbjct: 438 STFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVWDVRTRKLSVDLPGHKDEVYTVDWSVD 497
Query: 195 TRKI 198
+++
Sbjct: 498 GKRV 501
Score = 125 (49.1 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 49/200 (24%), Positives = 89/200 (44%)
Query: 69 FTGHEQGISDLATIR-LWDV-PTATSLKTLIGHTNYVFCINFNPQ-SNRIVSDTFNETIR 125
+ E I+ L T R ++ V P S + GH + + C F P S+R+V+ + T R
Sbjct: 110 YNSTEDQITLLYTPRAVFKVKPVTRSSSAIAGHGSTILCSAFAPHTSSRMVTGAGDNTAR 169
Query: 126 IWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLD 185
IWD T + L H + V + ++ DG +I T S D R+ D + G+ +
Sbjct: 170 IWDCDTQTPMHTLKGHYNWVLCVSWSPDGEVIATGSMDNTIRLWDPKS--GQCLGDALRG 227
Query: 186 NTLRLWNYSTRKILKTYSGYTNSKYCISS---TFSVTNG-----KYIVSHRDPVISVASH 237
++ + + S I G + + SS T + + +Y +S +S
Sbjct: 228 HSKWITSLSWEPIHLVKPG-SKPRLASSSKDGTIKIWDTVSRVCQYTMSGHTNSVSCVKW 286
Query: 238 PAKNIIASGALDNDRTMKIW 257
+ ++ SG+ +DRT+++W
Sbjct: 287 GGQGLLYSGS--HDRTVRVW 304
>UNIPROTKB|F1N9W1 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0045741 "positive regulation of epidermal
growth factor-activated receptor activity" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:AADN02016174 IPI:IPI00582326
Ensembl:ENSGALT00000016428 Uniprot:F1N9W1
Length = 587
Score = 192 (72.6 bits), Expect = 3.3e-14, P = 3.3e-14
Identities = 44/149 (29%), Positives = 81/149 (54%)
Query: 75 GISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKC 134
G +D T+++W+ T + TL GHT+ V C++ + + R+VS + + T+R+WDI+TG+C
Sbjct: 317 GSTD-RTLKVWNAETGECIHTLYGHTSTVRCMHLHEK--RVVSGSRDATLRVWDIETGQC 373
Query: 135 LKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTP------------------NG 176
L VL H V + + DG +V+ +YD + ++ D T +G
Sbjct: 374 LHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDG 431
Query: 177 KFILVGTLDNTLRLWNYSTRKILKTYSGY 205
++ G+LD ++R+W+ T + T +G+
Sbjct: 432 IHVVSGSLDTSIRVWDVETGNCIHTLTGH 460
Score = 185 (70.2 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 57/171 (33%), Positives = 87/171 (50%)
Query: 19 LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYS------LSSISNFDSTPPSPLQKFTGH 72
L GH+ AV V++ DGR + S + + + + L ++ + S LQ F G
Sbjct: 377 LMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYS-LQ-FDGI 432
Query: 73 EQGISDLAT-IRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKT 131
L T IR+WDV T + TL GH + + + N +VS + T++IWDIKT
Sbjct: 433 HVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL--KDNILVSGNADSTVKIWDIKT 490
Query: 132 GKCLKVLPA---HSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFI 179
G+CL+ L H VT + FN++ ++TSS DG ++ D T G+FI
Sbjct: 491 GQCLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKT--GEFI 537
Score = 159 (61.0 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 44/171 (25%), Positives = 78/171 (45%)
Query: 77 SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLK 136
SD T+++W T L+TL+GHT V+ + N I+S + + T+++W+ +TG+C+
Sbjct: 278 SDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQM--RDNIIISGSTDRTLKVWNAETGECIH 335
Query: 137 VLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTP------------------NGKF 178
L H+ V + + +V+ S D R+ D T +G+
Sbjct: 336 TLYGHTSTVRCMHLHEK--RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR 393
Query: 179 ILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCIS-STFSVTNGKYIVSHR 228
++ G D +++W+ T L T G+TN Y + V +G S R
Sbjct: 394 VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIR 444
Score = 149 (57.5 bits), Expect = 8.3e-08, P = 8.3e-08
Identities = 39/166 (23%), Positives = 79/166 (47%)
Query: 80 ATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLP 139
AT+R+WD+ T L L+GH V C+ ++ R+VS ++ +++WD +T CL L
Sbjct: 361 ATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQ 418
Query: 140 AHSDPVTAIDFNR----DGTM--------IVTSS----YDGLYRILDASTPNGKFILVGT 183
H++ V ++ F+ G++ + T + G + ++ G
Sbjct: 419 GHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGN 478
Query: 184 LDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRD 229
D+T+++W+ T + L+T G +K+ + T N ++++ D
Sbjct: 479 ADSTVKIWDIKTGQCLQTLQG--PNKHQSAVTCLQFNKNFVITSSD 522
Score = 138 (53.6 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 47/181 (25%), Positives = 85/181 (46%)
Query: 85 WDVPTATSLKTLIGHTNYVF-CINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSD 143
W S K L GH ++V C+ F NRIVS + + T+++W TGKCL+ L H+
Sbjct: 245 WRRGELKSPKVLKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTG 302
Query: 144 PVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYS 203
V + RD +I++ S D ++ +A T L G +T+R + ++++ S
Sbjct: 303 GVWSSQM-RDN-IIISGSTDRTLKVWNAETGECIHTLYGHT-STVRCMHLHEKRVV---S 356
Query: 204 GYTNSKYCISSTFSVTNGK--YIVSHRDPVISVASHPAKNIIASGALDNDRTMKIWTQEK 261
G S+ + + G+ +++ + + + ++ SGA D +K+W E
Sbjct: 357 G---SRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVV-SGAYDF--MVKVWDPET 410
Query: 262 E 262
E
Sbjct: 411 E 411
Score = 132 (51.5 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 38/135 (28%), Positives = 69/135 (51%)
Query: 14 TLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGHE 73
T TL GH V ++F DG + S S + ++ + + + N T +G E
Sbjct: 412 TCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVET-GNCIHTLTGHQSLTSGME 468
Query: 74 -------QGISDLATIRLWDVPTATSLKTLIG---HTNYVFCINFNPQSNRIVSDTFNET 123
G +D +T+++WD+ T L+TL G H + V C+ FN N +++ + + T
Sbjct: 469 LKDNILVSGNAD-STVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGT 525
Query: 124 IRIWDIKTGKCLKVL 138
+++WD+KTG+ ++ L
Sbjct: 526 VKLWDLKTGEFIRNL 540
>RGD|2321145 [details] [associations]
symbol:Fbxw7 "F-box and WD repeat domain containing 7, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006974 "response
to DNA damage stimulus" evidence=ISO] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0007219 "Notch signaling pathway"
evidence=ISO] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030324 "lung development" evidence=ISO] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0034644 "cellular response to
UV" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=ISO] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 RGD:2321145
GO:GO:0005783 GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974
GO:GO:0016567 GO:GO:0019005 GO:GO:0034644 GO:GO:0032876
GO:GO:2000060 GO:GO:0031146 GO:GO:0007062
GeneTree:ENSGT00690000101849 OrthoDB:EOG4MKNFW IPI:IPI00212282
ProteinModelPortal:D3ZQU4 Ensembl:ENSRNOT00000015279
UCSC:RGD:2321145 ArrayExpress:D3ZQU4 Uniprot:D3ZQU4
Length = 588
Score = 192 (72.6 bits), Expect = 3.3e-14, P = 3.3e-14
Identities = 44/149 (29%), Positives = 81/149 (54%)
Query: 75 GISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKC 134
G +D T+++W+ T + TL GHT+ V C++ + + R+VS + + T+R+WDI+TG+C
Sbjct: 359 GSTD-RTLKVWNAETGECIHTLYGHTSTVRCMHLHEK--RVVSGSRDATLRVWDIETGQC 415
Query: 135 LKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTP------------------NG 176
L VL H V + + DG +V+ +YD + ++ D T +G
Sbjct: 416 LHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDG 473
Query: 177 KFILVGTLDNTLRLWNYSTRKILKTYSGY 205
++ G+LD ++R+W+ T + T +G+
Sbjct: 474 IHVVSGSLDTSIRVWDVETGNCIHTLTGH 502
Score = 187 (70.9 bits), Expect = 9.0e-13, P = 9.0e-13
Identities = 58/171 (33%), Positives = 89/171 (52%)
Query: 19 LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYS------LSSISNFDSTPPSPLQKFTGH 72
L GH+ AV V++ DGR + S + + + + L ++ + S LQ F G
Sbjct: 419 LMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYS-LQ-FDGI 474
Query: 73 EQGISDLAT-IRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKT 131
L T IR+WDV T + TL GH + + + N +VS + T++IWDIKT
Sbjct: 475 HVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL--KDNILVSGNADSTVKIWDIKT 532
Query: 132 GKCLKVL--PA-HSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFI 179
G+CL+ L P+ H VT + FN++ ++TSS DG ++ D T G+FI
Sbjct: 533 GQCLQTLQGPSKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKT--GEFI 579
Score = 159 (61.0 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 44/171 (25%), Positives = 78/171 (45%)
Query: 77 SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLK 136
SD T+++W T L+TL+GHT V+ + N I+S + + T+++W+ +TG+C+
Sbjct: 320 SDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQM--RDNIIISGSTDRTLKVWNAETGECIH 377
Query: 137 VLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTP------------------NGKF 178
L H+ V + + +V+ S D R+ D T +G+
Sbjct: 378 TLYGHTSTVRCMHLHEK--RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR 435
Query: 179 ILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCIS-STFSVTNGKYIVSHR 228
++ G D +++W+ T L T G+TN Y + V +G S R
Sbjct: 436 VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIR 486
Score = 152 (58.6 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 40/166 (24%), Positives = 79/166 (47%)
Query: 80 ATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLP 139
AT+R+WD+ T L L+GH V C+ ++ R+VS ++ +++WD +T CL L
Sbjct: 403 ATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQ 460
Query: 140 AHSDPVTAIDFNR----DGTM--------IVTSS----YDGLYRILDASTPNGKFILVGT 183
H++ V ++ F+ G++ + T + G + ++ G
Sbjct: 461 GHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGN 520
Query: 184 LDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRD 229
D+T+++W+ T + L+T G SK+ + T N ++++ D
Sbjct: 521 ADSTVKIWDIKTGQCLQTLQG--PSKHQSAVTCLQFNKNFVITSSD 564
Score = 138 (53.6 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 47/181 (25%), Positives = 85/181 (46%)
Query: 85 WDVPTATSLKTLIGHTNYVF-CINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSD 143
W S K L GH ++V C+ F NRIVS + + T+++W TGKCL+ L H+
Sbjct: 287 WRRGELRSPKVLKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTG 344
Query: 144 PVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYS 203
V + RD +I++ S D ++ +A T L G +T+R + ++++ S
Sbjct: 345 GVWSSQM-RDN-IIISGSTDRTLKVWNAETGECIHTLYGHT-STVRCMHLHEKRVV---S 398
Query: 204 GYTNSKYCISSTFSVTNGK--YIVSHRDPVISVASHPAKNIIASGALDNDRTMKIWTQEK 261
G S+ + + G+ +++ + + + ++ SGA D +K+W E
Sbjct: 399 G---SRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVV-SGAYDF--MVKVWDPET 452
Query: 262 E 262
E
Sbjct: 453 E 453
Score = 132 (51.5 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 38/135 (28%), Positives = 69/135 (51%)
Query: 14 TLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGHE 73
T TL GH V ++F DG + S S + ++ + + + N T +G E
Sbjct: 454 TCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVET-GNCIHTLTGHQSLTSGME 510
Query: 74 -------QGISDLATIRLWDVPTATSLKTLIG---HTNYVFCINFNPQSNRIVSDTFNET 123
G +D +T+++WD+ T L+TL G H + V C+ FN N +++ + + T
Sbjct: 511 LKDNILVSGNAD-STVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFN--KNFVITSSDDGT 567
Query: 124 IRIWDIKTGKCLKVL 138
+++WD+KTG+ ++ L
Sbjct: 568 VKLWDLKTGEFIRNL 582
>UNIPROTKB|F1MNN4 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000060 "positive regulation of protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:DAAA02044177 IPI:IPI00716528 UniGene:Bt.24006
ProteinModelPortal:F1MNN4 Ensembl:ENSBTAT00000010457 Uniprot:F1MNN4
Length = 627
Score = 192 (72.6 bits), Expect = 3.7e-14, P = 3.7e-14
Identities = 44/149 (29%), Positives = 81/149 (54%)
Query: 75 GISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKC 134
G +D T+++W+ T + TL GHT+ V C++ + + R+VS + + T+R+WDI+TG+C
Sbjct: 357 GSTD-RTLKVWNAETGECIHTLYGHTSTVRCMHLHEK--RVVSGSRDATLRVWDIETGQC 413
Query: 135 LKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTP------------------NG 176
L VL H V + + DG +V+ +YD + ++ D T +G
Sbjct: 414 LHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDG 471
Query: 177 KFILVGTLDNTLRLWNYSTRKILKTYSGY 205
++ G+LD ++R+W+ T + T +G+
Sbjct: 472 IHVVSGSLDTSIRVWDVETGNCIHTLTGH 500
Score = 185 (70.2 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 57/171 (33%), Positives = 87/171 (50%)
Query: 19 LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYS------LSSISNFDSTPPSPLQKFTGH 72
L GH+ AV V++ DGR + S + + + + L ++ + S LQ F G
Sbjct: 417 LMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYS-LQ-FDGI 472
Query: 73 EQGISDLAT-IRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKT 131
L T IR+WDV T + TL GH + + + N +VS + T++IWDIKT
Sbjct: 473 HVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL--KDNILVSGNADSTVKIWDIKT 530
Query: 132 GKCLKVLPA---HSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFI 179
G+CL+ L H VT + FN++ ++TSS DG ++ D T G+FI
Sbjct: 531 GQCLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKT--GEFI 577
Score = 159 (61.0 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 44/171 (25%), Positives = 78/171 (45%)
Query: 77 SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLK 136
SD T+++W T L+TL+GHT V+ + N I+S + + T+++W+ +TG+C+
Sbjct: 318 SDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQM--RDNIIISGSTDRTLKVWNAETGECIH 375
Query: 137 VLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTP------------------NGKF 178
L H+ V + + +V+ S D R+ D T +G+
Sbjct: 376 TLYGHTSTVRCMHLHEK--RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR 433
Query: 179 ILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCIS-STFSVTNGKYIVSHR 228
++ G D +++W+ T L T G+TN Y + V +G S R
Sbjct: 434 VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIR 484
Score = 149 (57.5 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 39/166 (23%), Positives = 79/166 (47%)
Query: 80 ATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLP 139
AT+R+WD+ T L L+GH V C+ ++ R+VS ++ +++WD +T CL L
Sbjct: 401 ATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQ 458
Query: 140 AHSDPVTAIDFNR----DGTM--------IVTSS----YDGLYRILDASTPNGKFILVGT 183
H++ V ++ F+ G++ + T + G + ++ G
Sbjct: 459 GHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGN 518
Query: 184 LDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRD 229
D+T+++W+ T + L+T G +K+ + T N ++++ D
Sbjct: 519 ADSTVKIWDIKTGQCLQTLQG--PNKHQSAVTCLQFNKNFVITSSD 562
Score = 138 (53.6 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 47/181 (25%), Positives = 85/181 (46%)
Query: 85 WDVPTATSLKTLIGHTNYVF-CINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSD 143
W S K L GH ++V C+ F NRIVS + + T+++W TGKCL+ L H+
Sbjct: 285 WRRGELKSPKVLKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTG 342
Query: 144 PVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYS 203
V + RD +I++ S D ++ +A T L G +T+R + ++++ S
Sbjct: 343 GVWSSQM-RDN-IIISGSTDRTLKVWNAETGECIHTLYGHT-STVRCMHLHEKRVV---S 396
Query: 204 GYTNSKYCISSTFSVTNGK--YIVSHRDPVISVASHPAKNIIASGALDNDRTMKIWTQEK 261
G S+ + + G+ +++ + + + ++ SGA D +K+W E
Sbjct: 397 G---SRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVV-SGAYDF--MVKVWDPET 450
Query: 262 E 262
E
Sbjct: 451 E 451
Score = 132 (51.5 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 38/135 (28%), Positives = 69/135 (51%)
Query: 14 TLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGHE 73
T TL GH V ++F DG + S S + ++ + + + N T +G E
Sbjct: 452 TCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVET-GNCIHTLTGHQSLTSGME 508
Query: 74 -------QGISDLATIRLWDVPTATSLKTLIG---HTNYVFCINFNPQSNRIVSDTFNET 123
G +D +T+++WD+ T L+TL G H + V C+ FN N +++ + + T
Sbjct: 509 LKDNILVSGNAD-STVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGT 565
Query: 124 IRIWDIKTGKCLKVL 138
+++WD+KTG+ ++ L
Sbjct: 566 VKLWDLKTGEFIRNL 580
>MGI|MGI:1354695 [details] [associations]
symbol:Fbxw7 "F-box and WD-40 domain protein 7"
species:10090 "Mus musculus" [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0007219 "Notch signaling pathway" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO;ISA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO] [GO:0030324 "lung
development" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050821 "protein stabilization" evidence=ISO]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=ISO] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] Reactome:REACT_93132 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 MGI:MGI:1354695 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030324
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0001570
GO:GO:0019005 GO:GO:0031146 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 HOVERGEN:HBG051596 OMA:EECLHTL EMBL:AF391202
EMBL:AF391193 EMBL:AF391194 EMBL:AF391195 EMBL:AF391196
EMBL:AF391197 EMBL:AF391198 EMBL:AF391199 EMBL:AF391200
EMBL:AF391201 EMBL:AF391192 EMBL:AF427101 EMBL:BC131648
EMBL:AK032174 IPI:IPI00162935 RefSeq:NP_536353.2 UniGene:Mm.196475
ProteinModelPortal:Q8VBV4 SMR:Q8VBV4 STRING:Q8VBV4 PRIDE:Q8VBV4
Ensembl:ENSMUST00000029727 GeneID:50754 KEGG:mmu:50754
UCSC:uc008pql.2 HOGENOM:HOG000236264 NextBio:307631 Bgee:Q8VBV4
Genevestigator:Q8VBV4 GermOnline:ENSMUSG00000028086 Uniprot:Q8VBV4
Length = 629
Score = 192 (72.6 bits), Expect = 3.7e-14, P = 3.7e-14
Identities = 44/149 (29%), Positives = 81/149 (54%)
Query: 75 GISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKC 134
G +D T+++W+ T + TL GHT+ V C++ + + R+VS + + T+R+WDI+TG+C
Sbjct: 359 GSTD-RTLKVWNAETGECIHTLYGHTSTVRCMHLHEK--RVVSGSRDATLRVWDIETGQC 415
Query: 135 LKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTP------------------NG 176
L VL H V + + DG +V+ +YD + ++ D T +G
Sbjct: 416 LHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDG 473
Query: 177 KFILVGTLDNTLRLWNYSTRKILKTYSGY 205
++ G+LD ++R+W+ T + T +G+
Sbjct: 474 IHVVSGSLDTSIRVWDVETGNCIHTLTGH 502
Score = 187 (70.9 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 58/171 (33%), Positives = 89/171 (52%)
Query: 19 LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYS------LSSISNFDSTPPSPLQKFTGH 72
L GH+ AV V++ DGR + S + + + + L ++ + S LQ F G
Sbjct: 419 LMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYS-LQ-FDGI 474
Query: 73 EQGISDLAT-IRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKT 131
L T IR+WDV T + TL GH + + + N +VS + T++IWDIKT
Sbjct: 475 HVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL--KDNILVSGNADSTVKIWDIKT 532
Query: 132 GKCLKVL--PA-HSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFI 179
G+CL+ L P+ H VT + FN++ ++TSS DG ++ D T G+FI
Sbjct: 533 GQCLQTLQGPSKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKT--GEFI 579
Score = 159 (61.0 bits), Expect = 6.0e-09, P = 6.0e-09
Identities = 44/171 (25%), Positives = 78/171 (45%)
Query: 77 SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLK 136
SD T+++W T L+TL+GHT V+ + N I+S + + T+++W+ +TG+C+
Sbjct: 320 SDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQM--RDNIIISGSTDRTLKVWNAETGECIH 377
Query: 137 VLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTP------------------NGKF 178
L H+ V + + +V+ S D R+ D T +G+
Sbjct: 378 TLYGHTSTVRCMHLHEK--RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR 435
Query: 179 ILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCIS-STFSVTNGKYIVSHR 228
++ G D +++W+ T L T G+TN Y + V +G S R
Sbjct: 436 VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIR 486
Score = 152 (58.6 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 40/166 (24%), Positives = 79/166 (47%)
Query: 80 ATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLP 139
AT+R+WD+ T L L+GH V C+ ++ R+VS ++ +++WD +T CL L
Sbjct: 403 ATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQ 460
Query: 140 AHSDPVTAIDFNR----DGTM--------IVTSS----YDGLYRILDASTPNGKFILVGT 183
H++ V ++ F+ G++ + T + G + ++ G
Sbjct: 461 GHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGN 520
Query: 184 LDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRD 229
D+T+++W+ T + L+T G SK+ + T N ++++ D
Sbjct: 521 ADSTVKIWDIKTGQCLQTLQG--PSKHQSAVTCLQFNKNFVITSSD 564
Score = 138 (53.6 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 47/181 (25%), Positives = 85/181 (46%)
Query: 85 WDVPTATSLKTLIGHTNYVF-CINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSD 143
W S K L GH ++V C+ F NRIVS + + T+++W TGKCL+ L H+
Sbjct: 287 WRRGELKSPKVLKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTG 344
Query: 144 PVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYS 203
V + RD +I++ S D ++ +A T L G +T+R + ++++ S
Sbjct: 345 GVWSSQM-RDN-IIISGSTDRTLKVWNAETGECIHTLYGHT-STVRCMHLHEKRVV---S 398
Query: 204 GYTNSKYCISSTFSVTNGK--YIVSHRDPVISVASHPAKNIIASGALDNDRTMKIWTQEK 261
G S+ + + G+ +++ + + + ++ SGA D +K+W E
Sbjct: 399 G---SRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVV-SGAYDF--MVKVWDPET 452
Query: 262 E 262
E
Sbjct: 453 E 453
Score = 132 (51.5 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 38/135 (28%), Positives = 69/135 (51%)
Query: 14 TLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGHE 73
T TL GH V ++F DG + S S + ++ + + + N T +G E
Sbjct: 454 TCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVET-GNCIHTLTGHQSLTSGME 510
Query: 74 -------QGISDLATIRLWDVPTATSLKTLIG---HTNYVFCINFNPQSNRIVSDTFNET 123
G +D +T+++WD+ T L+TL G H + V C+ FN N +++ + + T
Sbjct: 511 LKDNILVSGNAD-STVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFN--KNFVITSSDDGT 567
Query: 124 IRIWDIKTGKCLKVL 138
+++WD+KTG+ ++ L
Sbjct: 568 VKLWDLKTGEFIRNL 582
>POMBASE|SPBC15D4.14 [details] [associations]
symbol:taf73 "transcription factor TFIID complex subunit
Taf5-like" species:4896 "Schizosaccharomyces pombe" [GO:0000991
"core RNA polymerase II binding transcription factor activity"
evidence=IC] [GO:0005669 "transcription factor TFIID complex"
evidence=TAS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=TAS] [GO:0030071 "regulation of mitotic
metaphase/anaphase transition" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
PomBase:SPBC15D4.14 GO:GO:0005829 GO:GO:0006355 GO:GO:0030071
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0006367
GO:GO:0000991 GO:GO:0005669 KO:K03130 HOGENOM:HOG000212424
EMBL:AB039954 PIR:T39490 RefSeq:NP_596254.1
ProteinModelPortal:O74319 IntAct:O74319 STRING:O74319
EnsemblFungi:SPBC15D4.14.1 GeneID:2539882 KEGG:spo:SPBC15D4.14
OMA:CATISED OrthoDB:EOG4CRQ92 NextBio:20801027 Uniprot:O74319
Length = 642
Score = 192 (72.6 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 44/148 (29%), Positives = 77/148 (52%)
Query: 32 SHDG-RLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKF---TGHEQGISDLATIRLWDV 87
S DG L S + T++ Y+ + +D SP + H+Q T RLWDV
Sbjct: 422 SEDGFTRLWSKDTKSTIVKYAGHNAPIWD-VQFSPFGYYFATASHDQ------TARLWDV 474
Query: 88 PTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTA 147
A L+ +GH N V C++F+P + + + + + T R+WD++TG ++V AH PV+A
Sbjct: 475 EHAAPLRVFVGHQNDVDCVSFHPNAAYLATGSSDHTTRMWDVRTGGTVRVFNAHHSPVSA 534
Query: 148 IDFNRDGTMIVTSSYDGLYRILDASTPN 175
+ + DG + ++ G+ ++ D + N
Sbjct: 535 LCMSADGLSLASADESGIIKVWDLRSSN 562
Score = 115 (45.5 bits), Expect = 0.00074, P = 0.00074
Identities = 38/175 (21%), Positives = 68/175 (38%)
Query: 83 RLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHS 142
RLW T +++ GH ++ + F+P + + ++T R+WD++ L+V H
Sbjct: 428 RLWSKDTKSTIVKYAGHNAPIWDVQFSPFGYYFATASHDQTARLWDVEHAAPLRVFVGHQ 487
Query: 143 DPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTY 202
+ V + F+ + + T S D R+ D T G + + + S L
Sbjct: 488 NDVDCVSFHPNAAYLATGSSDHTTRMWDVRT-GGTVRVFNAHHSPVSALCMSADG-LSLA 545
Query: 203 SGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDNDRTMKIW 257
S + + S V H V S++ I+ SG D D + W
Sbjct: 546 SADESGIIKVWDLRSSNQHVSFVKHSSIVYSLSFSYDNKILVSGGADTD--VNFW 598
>SGD|S000000680 [details] [associations]
symbol:TUP1 "General repressor of transcription" species:4932
"Saccharomyces cerevisiae" [GO:0001191 "RNA polymerase II
transcription factor binding transcription factor activity involved
in negative regulation of transcription" evidence=IMP;IDA;IPI]
[GO:0017053 "transcriptional repressor complex" evidence=IDA]
[GO:0001198 "negative regulation of mating-type specific
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0000433 "negative regulation of transcription from RNA
polymerase II promoter by glucose" evidence=IMP] [GO:2000531
"regulation of fatty acid biosynthetic process by regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0036033 "mediator
complex binding" evidence=IDA;IPI] [GO:0042826 "histone deacetylase
binding" evidence=IDA;IPI] [GO:0043486 "histone exchange"
evidence=IMP] [GO:0061418 "regulation of transcription from RNA
polymerase II promoter in response to hypoxia" evidence=IMP]
[GO:0061392 "regulation of transcription from RNA polymerase II
promoter in response to osmotic stress" evidence=IMP] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IMP] [GO:0042393 "histone
binding" evidence=IDA;IPI] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA;IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0035955 "negative regulation of dipeptide transport by negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IMP] [GO:0016584 "nucleosome positioning"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000000680 GO:GO:0017053 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GO:GO:2001020 GO:GO:0043486 GO:GO:0042393 GO:GO:0042826
GO:GO:0061418 GO:GO:0016584 GO:GO:0043130 GO:GO:0080025
GO:GO:0001191 GO:GO:0035955 GO:GO:0000433 GO:GO:0007070
GO:GO:2000531 GO:GO:0061392 GeneTree:ENSGT00700000104507
GO:GO:0001198 GO:GO:0036033 HOGENOM:HOG000200558 KO:K06666
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:M31733 EMBL:M35861 EMBL:X16365 PIR:JN0133 RefSeq:NP_010007.1
PDB:1ERJ PDB:3VP8 PDB:3VP9 PDBsum:1ERJ PDBsum:3VP8 PDBsum:3VP9
ProteinModelPortal:P16649 SMR:P16649 DIP:DIP-512N IntAct:P16649
MINT:MINT-648551 STRING:P16649 PaxDb:P16649 PeptideAtlas:P16649
EnsemblFungi:YCR084C GeneID:850445 KEGG:sce:YCR084C CYGD:YCR084c
OMA:TISESCI EvolutionaryTrace:P16649 NextBio:966057
Genevestigator:P16649 GermOnline:YCR084C Uniprot:P16649
Length = 713
Score = 153 (58.9 bits), Expect = 3.8e-14, Sum P(2) = 3.8e-14
Identities = 36/111 (32%), Positives = 57/111 (51%)
Query: 64 SPLQKFTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNET 123
SP KF G D IR+WD+ + L GH ++ +++ P +++VS + + T
Sbjct: 452 SPDGKFLA--TGAED-RLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRT 508
Query: 124 IRIWDIKTGKCLKVLPAHSDPVTAIDFNR-DGTMIVTSSYDGLYRILDAST 173
+RIWD++TG+C L D VT + + DG I S D R+ D+ T
Sbjct: 509 VRIWDLRTGQCSLTLSIE-DGVTTVAVSPGDGKYIAAGSLDRAVRVWDSET 558
Score = 97 (39.2 bits), Expect = 3.8e-14, Sum P(2) = 3.8e-14
Identities = 32/102 (31%), Positives = 54/102 (52%)
Query: 159 TSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSV 218
T D +Y ++ T +G+ ++ G+LD +++LWN L+ + ++SK S T V
Sbjct: 573 TGHKDSVYSVV--FTRDGQSVVSGSLDRSVKLWN------LQNANNKSDSKTPNSGTCEV 624
Query: 219 TNGKYIVSHRDPVISVASHPAKNIIASGALDNDRTMKIWTQE 260
T YI H+D V+SVA+ I SG+ DR + W ++
Sbjct: 625 T---YI-GHKDFVLSVATTQNDEYILSGS--KDRGVLFWDKK 660
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 191 (72.3 bits), Expect = 4.1e-14, P = 4.1e-14
Identities = 65/259 (25%), Positives = 109/259 (42%)
Query: 11 RPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTY--SLSSISNFDSTPPSPLQK 68
+P + GH AV+ V FS G LL S S +KT+ + ++ S + ++
Sbjct: 80 KPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRS 139
Query: 69 --FTGHEQGI---SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNET 123
F Q SD TI++W L +L H N+V C F+P IVS + ++T
Sbjct: 140 VHFCSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKT 199
Query: 124 IRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPN--GKFILV 181
+++WD + +C+ H VT +DF+ GT + + D ++ D T + L
Sbjct: 200 VKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLH 259
Query: 182 GTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVS---HRDPVISVASHP 238
N L + + L T S + K + G+ + + H+ P +VA
Sbjct: 260 SAAVNALSF--HPSGNYLVTASSDSTLKI-----LDLMEGRLLYTLHGHQGPATTVAFSR 312
Query: 239 AKNIIASGALDNDRTMKIW 257
ASG +D + +W
Sbjct: 313 TGEYFASGG--SDEQVMVW 329
Score = 168 (64.2 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 47/180 (26%), Positives = 87/180 (48%)
Query: 2 SSDRSLESFRPYTLTQT--LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYS------LS 53
S D+++ + P ++ H V V F DG+ ++S +KT+ +S L
Sbjct: 111 SRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHRQKFLF 170
Query: 54 SISNFDSTPPSPLQKFTGHEQGI---SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNP 110
S+S + KF+ + I SD T++LWD + + + H +V ++F+P
Sbjct: 171 SLSQHINWVRCA--KFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHP 228
Query: 111 QSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
+ + + T+++WD++T + L+ HS V A+ F+ G +VT+S D +ILD
Sbjct: 229 SGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILD 288
Score = 147 (56.8 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 51/181 (28%), Positives = 86/181 (47%)
Query: 82 IRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIW--DIKTGKCLKVLP 139
+ +W + + GH + V C+NF+P + + S + ++T+RIW +IK G+ V
Sbjct: 74 LMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIK-GEST-VFR 131
Query: 140 AHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFIL-VGTLDNTLRLWNYST--R 196
AH+ V ++ F DG VT+S D ++ ST KF+ + N +R +S R
Sbjct: 132 AHTATVRSVHFCSDGQSFVTASDDKTIKVW--STHRQKFLFSLSQHINWVRCAKFSPDGR 189
Query: 197 KILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDNDRTMKI 256
I+ T + +S V + Y H V V HP+ +A+ +DN T+K+
Sbjct: 190 LIVSASDDKTVKLWDKTSRECVHS--YC-EHGGFVTYVDFHPSGTCVAAAGMDN--TVKV 244
Query: 257 W 257
W
Sbjct: 245 W 245
Score = 132 (51.5 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 47/176 (26%), Positives = 80/176 (45%)
Query: 14 TLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGHE 73
+L + GH AV+ V FS + + L S S + L+ + + P S +FTGH+
Sbjct: 41 SLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMK--------PQSRAYRFTGHK 92
Query: 74 QGISD---------LA------TIRLWDVPTATSLKTLI-GHTNYVFCINFNPQSNRIVS 117
++ LA T+R+W VP T+ HT V ++F V+
Sbjct: 93 DAVTCVNFSPSGHLLASGSRDKTVRIW-VPNIKGESTVFRAHTATVRSVHFCSDGQSFVT 151
Query: 118 DTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDAST 173
+ ++TI++W K L L H + V F+ DG +IV++S D ++ D ++
Sbjct: 152 ASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTS 207
>UNIPROTKB|Q969H0 [details] [associations]
symbol:FBXW7 "F-box/WD repeat-containing protein 7"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0034644 "cellular response to UV" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=IDA] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=IDA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IMP] [GO:2000346 "negative regulation of
hepatocyte proliferation" evidence=ISS] [GO:0055088 "lipid
homeostasis" evidence=ISS] [GO:0032880 "regulation of protein
localization" evidence=ISS] [GO:0010883 "regulation of lipid
storage" evidence=ISS] [GO:0010868 "negative regulation of
triglyceride biosynthetic process" evidence=ISS] [GO:0001944
"vasculature development" evidence=TAS] [GO:0045746 "negative
regulation of Notch signaling pathway" evidence=ISS] [GO:2000639
"negative regulation of SREBP signaling pathway" evidence=ISS]
Reactome:REACT_17015 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
GO:GO:0005783 GO:GO:0005794 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0043234 GO:GO:0050821
GO:GO:0005654 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 GO:GO:0032880 SUPFAM:SSF81383
GO:GO:0006974 GO:GO:0016567 GO:GO:0055088 GO:GO:0019005
GO:GO:0034644 GO:GO:0001944 GO:GO:0032876 GO:GO:0010883
GO:GO:2000060 GO:GO:0045746 GO:GO:0031146 GO:GO:0007062 KO:K10260
EMBL:AY033553 EMBL:AF383178 EMBL:AY008274 EMBL:AF411971
EMBL:AF411972 EMBL:AY049984 EMBL:AK001933 EMBL:CR749305
EMBL:BC037320 EMBL:BC117244 EMBL:BC117246 EMBL:BC143944
IPI:IPI00056349 IPI:IPI00059165 IPI:IPI00075075 IPI:IPI00402151
RefSeq:NP_001013433.1 RefSeq:NP_060785.2 RefSeq:NP_361014.1
UniGene:Hs.561245 UniGene:Hs.717081 PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR ProteinModelPortal:Q969H0
SMR:Q969H0 DIP:DIP-27613N IntAct:Q969H0 MINT:MINT-276696
STRING:Q969H0 PhosphoSite:Q969H0 DMDM:44887885 PaxDb:Q969H0
PRIDE:Q969H0 DNASU:55294 Ensembl:ENST00000263981
Ensembl:ENST00000281708 Ensembl:ENST00000296555 GeneID:55294
KEGG:hsa:55294 UCSC:uc003imq.3 UCSC:uc003imr.3 UCSC:uc003ims.3
CTD:55294 GeneCards:GC04M153242 HGNC:HGNC:16712 HPA:CAB013793
HPA:CAB029987 MIM:606278 neXtProt:NX_Q969H0 PharmGKB:PA28054
HOVERGEN:HBG051596 InParanoid:Q969H0 OMA:EECLHTL OrthoDB:EOG4MKNFW
PhylomeDB:Q969H0 EvolutionaryTrace:Q969H0 GenomeRNAi:55294
NextBio:59488 ArrayExpress:Q969H0 Bgee:Q969H0 CleanEx:HS_FBXW7
Genevestigator:Q969H0 GermOnline:ENSG00000109670 GO:GO:2000346
GO:GO:2000639 GO:GO:0010868 Uniprot:Q969H0
Length = 707
Score = 192 (72.6 bits), Expect = 4.5e-14, P = 4.5e-14
Identities = 44/149 (29%), Positives = 81/149 (54%)
Query: 75 GISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKC 134
G +D T+++W+ T + TL GHT+ V C++ + + R+VS + + T+R+WDI+TG+C
Sbjct: 437 GSTD-RTLKVWNAETGECIHTLYGHTSTVRCMHLHEK--RVVSGSRDATLRVWDIETGQC 493
Query: 135 LKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTP------------------NG 176
L VL H V + + DG +V+ +YD + ++ D T +G
Sbjct: 494 LHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDG 551
Query: 177 KFILVGTLDNTLRLWNYSTRKILKTYSGY 205
++ G+LD ++R+W+ T + T +G+
Sbjct: 552 IHVVSGSLDTSIRVWDVETGNCIHTLTGH 580
Score = 185 (70.2 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 57/171 (33%), Positives = 87/171 (50%)
Query: 19 LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYS------LSSISNFDSTPPSPLQKFTGH 72
L GH+ AV V++ DGR + S + + + + L ++ + S LQ F G
Sbjct: 497 LMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYS-LQ-FDGI 552
Query: 73 EQGISDLAT-IRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKT 131
L T IR+WDV T + TL GH + + + N +VS + T++IWDIKT
Sbjct: 553 HVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL--KDNILVSGNADSTVKIWDIKT 610
Query: 132 GKCLKVLPA---HSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFI 179
G+CL+ L H VT + FN++ ++TSS DG ++ D T G+FI
Sbjct: 611 GQCLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKT--GEFI 657
Score = 159 (61.0 bits), Expect = 7.1e-09, P = 7.1e-09
Identities = 44/171 (25%), Positives = 78/171 (45%)
Query: 77 SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLK 136
SD T+++W T L+TL+GHT V+ + N I+S + + T+++W+ +TG+C+
Sbjct: 398 SDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQM--RDNIIISGSTDRTLKVWNAETGECIH 455
Query: 137 VLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTP------------------NGKF 178
L H+ V + + +V+ S D R+ D T +G+
Sbjct: 456 TLYGHTSTVRCMHLHEK--RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR 513
Query: 179 ILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCIS-STFSVTNGKYIVSHR 228
++ G D +++W+ T L T G+TN Y + V +G S R
Sbjct: 514 VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIR 564
Score = 149 (57.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 39/166 (23%), Positives = 79/166 (47%)
Query: 80 ATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLP 139
AT+R+WD+ T L L+GH V C+ ++ R+VS ++ +++WD +T CL L
Sbjct: 481 ATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQ 538
Query: 140 AHSDPVTAIDFNR----DGTM--------IVTSS----YDGLYRILDASTPNGKFILVGT 183
H++ V ++ F+ G++ + T + G + ++ G
Sbjct: 539 GHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGN 598
Query: 184 LDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRD 229
D+T+++W+ T + L+T G +K+ + T N ++++ D
Sbjct: 599 ADSTVKIWDIKTGQCLQTLQG--PNKHQSAVTCLQFNKNFVITSSD 642
Score = 138 (53.6 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 47/181 (25%), Positives = 85/181 (46%)
Query: 85 WDVPTATSLKTLIGHTNYVF-CINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSD 143
W S K L GH ++V C+ F NRIVS + + T+++W TGKCL+ L H+
Sbjct: 365 WRRGELKSPKVLKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTG 422
Query: 144 PVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYS 203
V + RD +I++ S D ++ +A T L G +T+R + ++++ S
Sbjct: 423 GVWSSQM-RDN-IIISGSTDRTLKVWNAETGECIHTLYGHT-STVRCMHLHEKRVV---S 476
Query: 204 GYTNSKYCISSTFSVTNGK--YIVSHRDPVISVASHPAKNIIASGALDNDRTMKIWTQEK 261
G S+ + + G+ +++ + + + ++ SGA D +K+W E
Sbjct: 477 G---SRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVV-SGAYDF--MVKVWDPET 530
Query: 262 E 262
E
Sbjct: 531 E 531
Score = 132 (51.5 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 38/135 (28%), Positives = 69/135 (51%)
Query: 14 TLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGHE 73
T TL GH V ++F DG + S S + ++ + + + N T +G E
Sbjct: 532 TCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVET-GNCIHTLTGHQSLTSGME 588
Query: 74 -------QGISDLATIRLWDVPTATSLKTLIG---HTNYVFCINFNPQSNRIVSDTFNET 123
G +D +T+++WD+ T L+TL G H + V C+ FN N +++ + + T
Sbjct: 589 LKDNILVSGNAD-STVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGT 645
Query: 124 IRIWDIKTGKCLKVL 138
+++WD+KTG+ ++ L
Sbjct: 646 VKLWDLKTGEFIRNL 660
>UNIPROTKB|E2QUZ3 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070374 "positive regulation of ERK1 and
ERK2 cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 OMA:EECLHTL EMBL:AAEX03010045 RefSeq:XP_867701.2
Ensembl:ENSCAFT00000012962 GeneID:475465 KEGG:cfa:475465
NextBio:20851305 Uniprot:E2QUZ3
Length = 712
Score = 192 (72.6 bits), Expect = 4.5e-14, P = 4.5e-14
Identities = 44/149 (29%), Positives = 81/149 (54%)
Query: 75 GISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKC 134
G +D T+++W+ T + TL GHT+ V C++ + + R+VS + + T+R+WDI+TG+C
Sbjct: 442 GSTD-RTLKVWNAETGECIHTLYGHTSTVRCMHLHEK--RVVSGSRDATLRVWDIETGQC 498
Query: 135 LKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTP------------------NG 176
L VL H V + + DG +V+ +YD + ++ D T +G
Sbjct: 499 LHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDG 556
Query: 177 KFILVGTLDNTLRLWNYSTRKILKTYSGY 205
++ G+LD ++R+W+ T + T +G+
Sbjct: 557 IHVVSGSLDTSIRVWDVETGNCIHTLTGH 585
Score = 185 (70.2 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 57/171 (33%), Positives = 87/171 (50%)
Query: 19 LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYS------LSSISNFDSTPPSPLQKFTGH 72
L GH+ AV V++ DGR + S + + + + L ++ + S LQ F G
Sbjct: 502 LMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYS-LQ-FDGI 557
Query: 73 EQGISDLAT-IRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKT 131
L T IR+WDV T + TL GH + + + N +VS + T++IWDIKT
Sbjct: 558 HVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL--KDNILVSGNADSTVKIWDIKT 615
Query: 132 GKCLKVLPA---HSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFI 179
G+CL+ L H VT + FN++ ++TSS DG ++ D T G+FI
Sbjct: 616 GQCLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKT--GEFI 662
Score = 159 (61.0 bits), Expect = 7.1e-09, P = 7.1e-09
Identities = 44/171 (25%), Positives = 78/171 (45%)
Query: 77 SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLK 136
SD T+++W T L+TL+GHT V+ + N I+S + + T+++W+ +TG+C+
Sbjct: 403 SDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQM--RDNIIISGSTDRTLKVWNAETGECIH 460
Query: 137 VLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTP------------------NGKF 178
L H+ V + + +V+ S D R+ D T +G+
Sbjct: 461 TLYGHTSTVRCMHLHEK--RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR 518
Query: 179 ILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCIS-STFSVTNGKYIVSHR 228
++ G D +++W+ T L T G+TN Y + V +G S R
Sbjct: 519 VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIR 569
Score = 149 (57.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 39/166 (23%), Positives = 79/166 (47%)
Query: 80 ATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLP 139
AT+R+WD+ T L L+GH V C+ ++ R+VS ++ +++WD +T CL L
Sbjct: 486 ATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQ 543
Query: 140 AHSDPVTAIDFNR----DGTM--------IVTSS----YDGLYRILDASTPNGKFILVGT 183
H++ V ++ F+ G++ + T + G + ++ G
Sbjct: 544 GHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGN 603
Query: 184 LDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRD 229
D+T+++W+ T + L+T G +K+ + T N ++++ D
Sbjct: 604 ADSTVKIWDIKTGQCLQTLQG--PNKHQSAVTCLQFNKNFVITSSD 647
Score = 138 (53.6 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 47/181 (25%), Positives = 85/181 (46%)
Query: 85 WDVPTATSLKTLIGHTNYVF-CINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSD 143
W S K L GH ++V C+ F NRIVS + + T+++W TGKCL+ L H+
Sbjct: 370 WRRGELKSPKVLKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTG 427
Query: 144 PVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYS 203
V + RD +I++ S D ++ +A T L G +T+R + ++++ S
Sbjct: 428 GVWSSQM-RDN-IIISGSTDRTLKVWNAETGECIHTLYGHT-STVRCMHLHEKRVV---S 481
Query: 204 GYTNSKYCISSTFSVTNGK--YIVSHRDPVISVASHPAKNIIASGALDNDRTMKIWTQEK 261
G S+ + + G+ +++ + + + ++ SGA D +K+W E
Sbjct: 482 G---SRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVV-SGAYDF--MVKVWDPET 535
Query: 262 E 262
E
Sbjct: 536 E 536
Score = 132 (51.5 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 38/135 (28%), Positives = 69/135 (51%)
Query: 14 TLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGHE 73
T TL GH V ++F DG + S S + ++ + + + N T +G E
Sbjct: 537 TCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVET-GNCIHTLTGHQSLTSGME 593
Query: 74 -------QGISDLATIRLWDVPTATSLKTLIG---HTNYVFCINFNPQSNRIVSDTFNET 123
G +D +T+++WD+ T L+TL G H + V C+ FN N +++ + + T
Sbjct: 594 LKDNILVSGNAD-STVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGT 650
Query: 124 IRIWDIKTGKCLKVL 138
+++WD+KTG+ ++ L
Sbjct: 651 VKLWDLKTGEFIRNL 665
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 191 (72.3 bits), Expect = 4.8e-14, P = 4.8e-14
Identities = 66/254 (25%), Positives = 117/254 (46%)
Query: 18 TLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYS---------LSSISNF-DSTPPS--- 64
TL GH AV + ++ DG +L S+S +KT+ + L ++F +S P+
Sbjct: 131 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRG 190
Query: 65 PLQKFTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETI 124
P TG + G T++LWD+ +++T +T V + FN S++I+S + I
Sbjct: 191 PQLVCTGSDDG-----TVKLWDIRKKAAVQTF-QNTYQVLAVTFNDTSDQIISGGIDNDI 244
Query: 125 RIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDAS--TPNGKFILV- 181
++WD++ K + H+D VT + + +G+ +++++ D RI D P + + +
Sbjct: 245 KVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKIF 304
Query: 182 -GTLDN----TLRL-WNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVA 235
G + N LR W+ KI G + + T S + H V +A
Sbjct: 305 QGNVHNFEKNLLRCSWSPDGSKIA---GGSADRFVYVWDTTSRRILYKLPGHAGSVNELA 361
Query: 236 SHPAKNIIASGALD 249
HP + II S + D
Sbjct: 362 FHPEEPIILSASSD 375
Score = 130 (50.8 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 49/185 (26%), Positives = 87/185 (47%)
Query: 82 IRLWDV-PTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPA 140
I LW+V + TL GH+ V +++N + + S + ++T+ +WD +TG+ +K L
Sbjct: 117 ILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKG 176
Query: 141 HSDPVTAIDFNRDGTMIV-TSSYDGLYRILDASTPNGKFILVGTLDNTLRL----WNYST 195
H+ V + R G +V T S DG ++ D K V T NT ++ +N ++
Sbjct: 177 HTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIR----KKAAVQTFQNTYQVLAVTFNDTS 232
Query: 196 RKILKTYSGYTNSKYCISSTFSVTNGK--YIV-SHRDPVISVASHPAKNIIASGALDNDR 252
+I+ G N + + K Y + H D V ++ + + S A+DN
Sbjct: 233 DQIIS--GGIDND----IKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDN-- 284
Query: 253 TMKIW 257
T++IW
Sbjct: 285 TVRIW 289
Score = 124 (48.7 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 29/92 (31%), Positives = 46/92 (50%)
Query: 88 PTATSLKT----LIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKC--LKVLPAH 141
P +SL+ L GH V+C F+P N + S F+ I +W++ G C L H
Sbjct: 77 PRCSSLQAPIMLLSGHEGEVYCCKFHPWGNTLASAGFDRLILLWNVY-GDCDNYATLKGH 135
Query: 142 SDPVTAIDFNRDGTMIVTSSYDGLYRILDAST 173
S V + +N DG+M+ ++S D + D+ T
Sbjct: 136 SGAVMELHYNTDGSMLFSASTDKTVAVWDSET 167
>ZFIN|ZDB-GENE-090313-79 [details] [associations]
symbol:fbxw7 "F-box and WD repeat domain containing
7" species:7955 "Danio rerio" [GO:0045746 "negative regulation of
Notch signaling pathway" evidence=IMP] [GO:0001525 "angiogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
ZFIN:ZDB-GENE-090313-79 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0001525 SUPFAM:SSF81383 GO:GO:0045746
GeneTree:ENSGT00690000101849 EMBL:AL953881 IPI:IPI00499035
Ensembl:ENSDART00000086512 Bgee:F1RCB5 Uniprot:F1RCB5
Length = 760
Score = 192 (72.6 bits), Expect = 5.0e-14, P = 5.0e-14
Identities = 44/149 (29%), Positives = 81/149 (54%)
Query: 75 GISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKC 134
G +D T+++W+ T + TL GHT+ V C++ + + R+VS + + T+R+WDI+TG+C
Sbjct: 490 GSTD-RTLKVWNAETGECIHTLYGHTSTVRCMHLHEK--RVVSGSRDATLRVWDIETGQC 546
Query: 135 LKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTP------------------NG 176
L VL H V + + DG +V+ +YD + ++ D T +G
Sbjct: 547 LHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDG 604
Query: 177 KFILVGTLDNTLRLWNYSTRKILKTYSGY 205
++ G+LD ++R+W+ T + T +G+
Sbjct: 605 IHVVSGSLDTSIRVWDVETGNCIHTLTGH 633
Score = 184 (69.8 bits), Expect = 4.3e-12, P = 4.3e-12
Identities = 57/171 (33%), Positives = 87/171 (50%)
Query: 19 LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYS------LSSISNFDSTPPSPLQKFTGH 72
L GH+ AV V++ DGR + S + + + + L ++ + S LQ F G
Sbjct: 550 LMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYS-LQ-FDGI 605
Query: 73 EQGISDLAT-IRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKT 131
L T IR+WDV T + TL GH + + + N +VS + T++IWDIKT
Sbjct: 606 HVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL--KDNILVSGNADSTVKIWDIKT 663
Query: 132 GKCLKVLPA---HSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFI 179
G+CL+ L H VT + FN++ ++TSS DG ++ D T G+FI
Sbjct: 664 GQCLQTLQGPHKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLRT--GEFI 710
Score = 159 (61.0 bits), Expect = 7.8e-09, P = 7.8e-09
Identities = 44/171 (25%), Positives = 78/171 (45%)
Query: 77 SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLK 136
SD T+++W T L+TL+GHT V+ + N I+S + + T+++W+ +TG+C+
Sbjct: 451 SDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQM--RDNIIISGSTDRTLKVWNAETGECIH 508
Query: 137 VLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTP------------------NGKF 178
L H+ V + + +V+ S D R+ D T +G+
Sbjct: 509 TLYGHTSTVRCMHLHEK--RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR 566
Query: 179 ILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCIS-STFSVTNGKYIVSHR 228
++ G D +++W+ T L T G+TN Y + V +G S R
Sbjct: 567 VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIR 617
Score = 147 (56.8 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 39/166 (23%), Positives = 78/166 (46%)
Query: 80 ATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLP 139
AT+R+WD+ T L L+GH V C+ ++ R+VS ++ +++WD +T CL L
Sbjct: 534 ATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQ 591
Query: 140 AHSDPVTAIDFNR----DGTM--------IVTSS----YDGLYRILDASTPNGKFILVGT 183
H++ V ++ F+ G++ + T + G + ++ G
Sbjct: 592 GHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGN 651
Query: 184 LDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRD 229
D+T+++W+ T + L+T G K+ + T N ++++ D
Sbjct: 652 ADSTVKIWDIKTGQCLQTLQG--PHKHQSAVTCLQFNKNFVITSSD 695
Score = 138 (53.6 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 47/181 (25%), Positives = 85/181 (46%)
Query: 85 WDVPTATSLKTLIGHTNYVF-CINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSD 143
W S K L GH ++V C+ F NRIVS + + T+++W TGKCL+ L H+
Sbjct: 418 WRRGDLKSPKVLKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTG 475
Query: 144 PVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYS 203
V + RD +I++ S D ++ +A T L G +T+R + ++++ S
Sbjct: 476 GVWSSQM-RDN-IIISGSTDRTLKVWNAETGECIHTLYGHT-STVRCMHLHEKRVV---S 529
Query: 204 GYTNSKYCISSTFSVTNGK--YIVSHRDPVISVASHPAKNIIASGALDNDRTMKIWTQEK 261
G S+ + + G+ +++ + + + ++ SGA D +K+W E
Sbjct: 530 G---SRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVV-SGAYDF--MVKVWDPET 583
Query: 262 E 262
E
Sbjct: 584 E 584
Score = 129 (50.5 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 37/135 (27%), Positives = 69/135 (51%)
Query: 14 TLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGHE 73
T TL GH V ++F DG + S S + ++ + + + N T +G E
Sbjct: 585 TCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVET-GNCIHTLTGHQSLTSGME 641
Query: 74 -------QGISDLATIRLWDVPTATSLKTLIG---HTNYVFCINFNPQSNRIVSDTFNET 123
G +D +T+++WD+ T L+TL G H + V C+ FN N +++ + + T
Sbjct: 642 LKDNILVSGNAD-STVKIWDIKTGQCLQTLQGPHKHQSAVTCLQFN--KNFVITSSDDGT 698
Query: 124 IRIWDIKTGKCLKVL 138
+++WD++TG+ ++ L
Sbjct: 699 VKLWDLRTGEFIRNL 713
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 181 (68.8 bits), Expect = 5.0e-14, Sum P(2) = 5.0e-14
Identities = 48/167 (28%), Positives = 80/167 (47%)
Query: 16 TQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSIS--------NFD--STPPSP 65
++ L+GH V V FS D L SSS + T+ +SL + + N+ T SP
Sbjct: 492 SKILHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLVGYKGHNYPVWDTQFSP 551
Query: 66 LQKFT---GHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNE 122
+ GH++ RLW L+ GH V C F+P SN + + + +
Sbjct: 552 FGYYFVSGGHDR------VARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYVATGSSDR 605
Query: 123 TIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRIL 169
T+R+WD+ G C+++ H P+ ++ F+ +G + + S DG R+L
Sbjct: 606 TVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDG--RVL 650
Score = 166 (63.5 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 60/243 (24%), Positives = 107/243 (44%)
Query: 19 LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGHEQGISD 78
LN + + ++ V F+ D L+ A+ T+ +S++ + E SD
Sbjct: 423 LNAY-QGLTAVDFTDDSSLIAGGFADSTVRVWSVTP-KKLRKVKSAADLNLIDKE---SD 477
Query: 79 LATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVL 138
R+ D T++ K L GH+ V+ ++F+P N ++S + + TIR+W ++T CL
Sbjct: 478 DVLERIMDEKTSSESKILHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLVGY 537
Query: 139 PAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTL-DNTLRLWNYSTRK 197
H+ PV F+ G V+ +D + R+ I G L D T ++ ++
Sbjct: 538 KGHNYPVWDTQFSPFGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNY 597
Query: 198 ILKTYSGYTNSKYCISSTFSVTNGKYI---VSHRDPVISVASHPAKNIIASGALDNDRTM 254
+ T S + V NG + H+ P+ S+A P +ASG+ D R +
Sbjct: 598 VA------TGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDG-RVL 650
Query: 255 KIW 257
+W
Sbjct: 651 -LW 652
Score = 148 (57.2 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 30/96 (31%), Positives = 49/96 (51%)
Query: 75 GISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKC 134
G SD T+RLWDV ++ GH + + F+P + S + + + +WDI G
Sbjct: 601 GSSD-RTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDIGHGLM 659
Query: 135 LKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
+ L H+ + A+ F+RDG +I + S D R+ D
Sbjct: 660 IAELKGHTGTIYALKFSRDGEIIASGSIDNTVRLWD 695
Score = 135 (52.6 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 49/184 (26%), Positives = 76/184 (41%)
Query: 77 SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLK 136
S+ TIRLW + T T L GH V+ F+P VS + R+W + L+
Sbjct: 518 SEDGTIRLWSLQTFTCLVGYKGHNYPVWDTQFSPFGYYFVSGGHDRVARLWATDHYQPLR 577
Query: 137 VLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYSTR 196
+ H VT F+ + + T S D R+ D N I G L
Sbjct: 578 IFAGHLADVTCTRFHPNSNYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNG 637
Query: 197 KILKTYSGYTNSKYCISSTFSVTNGKYIVS---HRDPVISVASHPAKNIIASGALDNDRT 253
K L SG T+ + + + + +G I H + ++ IIASG++DN T
Sbjct: 638 KFLA--SGSTDGRVLL---WDIGHGLMIAELKGHTGTIYALKFSRDGEIIASGSIDN--T 690
Query: 254 MKIW 257
+++W
Sbjct: 691 VRLW 694
Score = 58 (25.5 bits), Expect = 5.0e-14, Sum P(2) = 5.0e-14
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 154 GTMIVT-SSYDGLYRILDASTPNGKFILVGTLDNTLRLWN 192
G MI + G L S +G+ I G++DNT+RLW+
Sbjct: 657 GLMIAELKGHTGTIYALKFSR-DGEIIASGSIDNTVRLWD 695
>SGD|S000001308 [details] [associations]
symbol:MET30 "F-box protein containing five copies of the
WD40 motif" species:4932 "Saccharomyces cerevisiae" [GO:0008652
"cellular amino acid biosynthetic process" evidence=IEA]
[GO:0019344 "cysteine biosynthetic process" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IGI;IPI] [GO:0000209 "protein polyubiquitination"
evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0009086
"methionine biosynthetic process" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0043224 "nuclear SCF ubiquitin ligase
complex" evidence=IDA] [GO:0046685 "response to arsenic-containing
substance" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IDA] [GO:0000114 "regulation of transcription involved in
G1 phase of mitotic cell cycle" evidence=IMP] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IMP] [GO:0000087 "M phase of mitotic cell cycle"
evidence=IMP] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IMP] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 UniPathway:UPA00143 SGD:S000001308 GO:GO:0005737
GO:GO:0046686 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046685 GO:GO:0000082 EMBL:BK006942
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
SUPFAM:SSF81383 EMBL:Z46861 GO:GO:0000114 GO:GO:0009086
GO:GO:0000209 GO:GO:0019344 GO:GO:0043130 GO:GO:0031146
GO:GO:0000087 GO:GO:0043224 GO:GO:0030174
GeneTree:ENSGT00690000101849 EMBL:L26505 PIR:S49932
RefSeq:NP_012218.1 ProteinModelPortal:P39014 SMR:P39014
DIP:DIP-1439N IntAct:P39014 MINT:MINT-385167 STRING:P39014
PaxDb:P39014 PeptideAtlas:P39014 EnsemblFungi:YIL046W GeneID:854765
KEGG:sce:YIL046W CYGD:YIL046w HOGENOM:HOG000166480 KO:K10259
OMA:ILCYLDT OrthoDB:EOG496313 NextBio:977517 Genevestigator:P39014
GermOnline:YIL046W Uniprot:P39014
Length = 640
Score = 162 (62.1 bits), Expect = 5.4e-14, Sum P(2) = 5.4e-14
Identities = 46/139 (33%), Positives = 71/139 (51%)
Query: 15 LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS---ISNFDSTPPSPLQKFTG 71
L + L+GH V + F D R L + S +KT+ ++ + IS + S L +
Sbjct: 334 LIRRLSGHSDGVKTLYF--DDRKLITGSLDKTIRVWNYITGECISTYRGHSDSVLSVDSY 391
Query: 72 HEQGISDLA--TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDI 129
+ +S A T+++W V + T TL GHT +V C+ +P+S S + + TIR+WDI
Sbjct: 392 QKVIVSGSADKTVKVWHVESRTCY-TLRGHTEWVNCVKLHPKSFSCFSCSDDTTIRMWDI 450
Query: 130 KTGKCLKVLPAHSDPVTAI 148
+T CLKV H V I
Sbjct: 451 RTNSCLKVFRGHVGQVQKI 469
Score = 131 (51.2 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 32/116 (27%), Positives = 63/116 (54%)
Query: 66 LQKFTGHEQGISDL-------------ATIRLWDVPTATSLKTLIGHTNYVFCINFNPQS 112
+Q+F GH G+ L +TI +WD+ T ++ L GH++ V + F+ +
Sbjct: 295 IQEFKGHMDGVLTLQFNYRLLFTGSYDSTIGIWDLFTGKLIRRLSGHSDGVKTLYFDDR- 353
Query: 113 NRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRI 168
++++ + ++TIR+W+ TG+C+ HSD V ++D + +IV+ S D ++
Sbjct: 354 -KLITGSLDKTIRVWNYITGECISTYRGHSDSVLSVDSYQK--VIVSGSADKTVKV 406
Score = 83 (34.3 bits), Expect = 5.4e-14, Sum P(2) = 5.4e-14
Identities = 17/57 (29%), Positives = 32/57 (56%)
Query: 168 ILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISS-TFSVTNGKY 223
+LD + P +L LDNT++LW+ T K ++T G+ + I++ F + +G +
Sbjct: 514 VLDENIPYPTHLLSCGLDNTIKLWDVKTGKCIRTQFGHVEGVWDIAADNFRIISGSH 570
Score = 53 (23.7 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 185 DNTLRLWNYSTRKILKTYSGY 205
D T+R+W+ T LK + G+
Sbjct: 442 DTTIRMWDIRTNSCLKVFRGH 462
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 191 (72.3 bits), Expect = 5.7e-14, P = 5.7e-14
Identities = 64/251 (25%), Positives = 117/251 (46%)
Query: 18 TLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYS---------LSSISNF-DSTPPS--- 64
TL GH AV + ++ DG +L S+S +KT+ + L ++F +S P+
Sbjct: 104 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRG 163
Query: 65 PLQKFTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETI 124
P TG + G T++LWD+ +++T +T V + FN S++I+S + I
Sbjct: 164 PQLVCTGSDDG-----TVKLWDIRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGGIDNDI 217
Query: 125 RIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDAS--TPNGKFILV- 181
++WD++ K + H+D VT + + +G+ +++++ D R+ D P + + +
Sbjct: 218 KVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIF 277
Query: 182 -GTLDN----TLRL-WNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVA 235
G + N LR W+ KI +G + + T S + H + VA
Sbjct: 278 QGNVHNFEKNLLRCSWSPDGSKIA---AGSADRFVYVWDTTSRRILYKLPGHAGSINEVA 334
Query: 236 SHPAKNIIASG 246
HP + II +G
Sbjct: 335 FHPDEPIIETG 345
Score = 128 (50.1 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 47/185 (25%), Positives = 87/185 (47%)
Query: 82 IRLWDV-PTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPA 140
I LW+V + TL GH+ V +++N + + S + ++T+ +WD +TG+ +K L
Sbjct: 90 ILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKG 149
Query: 141 HSDPVTAIDFNRDGTMIV-TSSYDGLYRILDASTPNGKFILVGTLDNTLRL----WNYST 195
H+ V + R G +V T S DG ++ D K + T NT ++ +N ++
Sbjct: 150 HTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIR----KKAAIQTFQNTYQVLAVTFNDTS 205
Query: 196 RKILKTYSGYTNSKYCISSTFSVTNGK--YIV-SHRDPVISVASHPAKNIIASGALDNDR 252
+I+ G N + + K Y + H D V ++ + + S A+DN
Sbjct: 206 DQIIS--GGIDND----IKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDN-- 257
Query: 253 TMKIW 257
T+++W
Sbjct: 258 TVRVW 262
Score = 121 (47.7 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 28/92 (30%), Positives = 46/92 (50%)
Query: 88 PTATSLKT----LIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKC--LKVLPAH 141
P +SL+ L GH V+C F+P + + S F+ I +W++ G C L H
Sbjct: 50 PRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY-GDCDNYATLKGH 108
Query: 142 SDPVTAIDFNRDGTMIVTSSYDGLYRILDAST 173
S V + +N DG+M+ ++S D + D+ T
Sbjct: 109 SGAVMELHYNTDGSMLFSASTDKTVAVWDSET 140
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 176 (67.0 bits), Expect = 6.0e-14, Sum P(2) = 6.0e-14
Identities = 49/178 (27%), Positives = 82/178 (46%)
Query: 2 SSDRSLESFRPYTLTQT--LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS----I 55
S DR++ + P ++ H V V FS DG+ L S+S +K++ +++
Sbjct: 79 SRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASEDKSIKVWNMYRQRFLY 138
Query: 56 SNFDSTPPSPLQKFTGHEQGI---SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQS 112
S + T KF+ + I S+ TI++WD + + + FNP
Sbjct: 139 SLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVGFANFVAFNPNG 198
Query: 113 NRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
I S + T++IWDI+ K L+ HS V + F+ G ++T+S DG +ILD
Sbjct: 199 TCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYLITASSDGTLKILD 256
Score = 176 (67.0 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 44/171 (25%), Positives = 85/171 (49%)
Query: 2 SSDRSLESFRPYT--LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS---IS 56
S D+S++ + Y +L H V KFS DGRL+ S S +KT+ + ++ ++
Sbjct: 121 SEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVN 180
Query: 57 NF-DSTPPSPLQKFTGHEQGISDLA---TIRLWDVPTATSLKTLIGHTNYVFCINFNPQS 112
NF D + F + I+ T+++WD+ L+ H+ V C++F+P
Sbjct: 181 NFSDFVGFANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSG 240
Query: 113 NRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYD 163
N +++ + + T++I D+ G+ + L H+ PV + F++ G + + D
Sbjct: 241 NYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFTSGGAD 291
Score = 165 (63.1 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 48/171 (28%), Positives = 81/171 (47%)
Query: 7 LESFRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTY---SLSSISNFDS-TP 62
L S RP GH ++ V+FS G LL S+S ++T+ + S F + T
Sbjct: 44 LWSLRPQARAFRYVGHKDVITSVQFSPLGNLLASASRDRTIRLWIPDKRGKSSEFKAHTA 103
Query: 63 PSPLQKFTGHEQGISDLA---TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDT 119
P F+ Q ++ + +I++W++ L +L HT++V C F+P IVS +
Sbjct: 104 PVRSVDFSADGQFLASASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCS 163
Query: 120 FNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
++TI+IWD +C+ + FN +GT I ++ D +I D
Sbjct: 164 EDKTIKIWDTTNKQCVNNFSDFVGFANFVAFNPNGTCIASAGSDHTVKIWD 214
Score = 131 (51.2 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 47/180 (26%), Positives = 83/180 (46%)
Query: 82 IRLWDV-PTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIW-DIKTGKCLKVLP 139
+ LW + P A + + +GH + + + F+P N + S + + TIR+W K GK +
Sbjct: 42 LMLWSLRPQARAFR-YVGHKDVITSVQFSPLGNLLASASRDRTIRLWIPDKRGKSSE-FK 99
Query: 140 AHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYST--RK 197
AH+ PV ++DF+ DG + ++S D ++ + + L + +R +S R
Sbjct: 100 AHTAPVRSVDFSADGQFLASASEDKSIKVWNMYRQRFLYSLYRHT-HWVRCAKFSPDGRL 158
Query: 198 ILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDNDRTMKIW 257
I+ T + ++ V N V + VA +P IAS +D T+KIW
Sbjct: 159 IVSCSEDKTIKIWDTTNKQCVNNFSDFVGFAN---FVAFNPNGTCIASAG--SDHTVKIW 213
Score = 124 (48.7 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 62/256 (24%), Positives = 109/256 (42%)
Query: 15 LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS-------ISNFD---STPPS 64
L + GH A++ V FS +G+ L + S + L+ +SL + + D S S
Sbjct: 10 LERYFKGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVITSVQFS 69
Query: 65 PLQKFTGHEQGISDLATIRLWDVPTATSLKTLI-GHTNYVFCINFNPQSNRIVSDTFNET 123
PL S TIRLW +P + HT V ++F+ + S + +++
Sbjct: 70 PLGNLLA---SASRDRTIRLW-IPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASEDKS 125
Query: 124 IRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGT 183
I++W++ + L L H+ V F+ DG +IV+ S D +I D T N + V
Sbjct: 126 IKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWD--TTNKQ--CVNN 181
Query: 184 LDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVS---HRDPVISVASHPAK 240
+ + N+ T S + + + + K + H V V+ HP+
Sbjct: 182 FSDFVGFANFVAFNPNGTCIASAGSDHTVK-IWDIRVNKLLQHYQVHSGGVNCVSFHPSG 240
Query: 241 NIIASGALDNDRTMKI 256
N + + + +D T+KI
Sbjct: 241 NYLITAS--SDGTLKI 254
Score = 59 (25.8 bits), Expect = 6.0e-14, Sum P(2) = 6.0e-14
Identities = 9/40 (22%), Positives = 23/40 (57%)
Query: 174 PNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCIS 213
P+G +++ + D TL++ + +++ T G+T + +S
Sbjct: 238 PSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVS 277
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 189 (71.6 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 48/171 (28%), Positives = 88/171 (51%)
Query: 2 SSDRSLESFRPYT--LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS---IS 56
S D+S++ + Y +L H V KFS DGRL+ S S +KT+ + +S ++
Sbjct: 121 SEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVN 180
Query: 57 NF-DSTPPSPLQKFTGHEQGISDLAT---IRLWDVPTATSLKTLIGHTNYVFCINFNPQS 112
NF DS + F+ + I+ + +R+WD+ L+ H+ V C++F+P
Sbjct: 181 NFSDSVGFANFVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCLSFHPSG 240
Query: 113 NRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYD 163
N +V+ + + T++I D+ G+ + L H+ PV + F++DG + + D
Sbjct: 241 NSLVTASSDGTVKILDLVEGRLIYTLQGHTGPVFTVSFSKDGELFTSGGAD 291
Score = 181 (68.8 bits), Expect = 7.2e-14, Sum P(2) = 7.2e-14
Identities = 51/171 (29%), Positives = 84/171 (49%)
Query: 7 LESFRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLS---SISNFDS-TP 62
L S +P+ GH V+ ++FS G LL S+S +KT+ + L S F + T
Sbjct: 44 LWSLKPHARAYRYVGHKDVVTSLQFSPQGNLLASASRDKTVRLWVLDRKGKSSEFKAHTA 103
Query: 63 PSPLQKFTGHEQGI---SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDT 119
P F+ Q + S+ +I++W + L +L HT++V C F+P IVS +
Sbjct: 104 PVRSVDFSADGQFLVTASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCS 163
Query: 120 FNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
++TI+IWD + +C+ +DF+ +GT I ++ D RI D
Sbjct: 164 EDKTIKIWDTTSKQCVNNFSDSVGFANFVDFSPNGTCIASAGSDHAVRIWD 214
Score = 164 (62.8 bits), Expect = 9.2e-10, P = 9.2e-10
Identities = 44/156 (28%), Positives = 74/156 (47%)
Query: 22 HLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS----ISNFDSTPPSPLQKFTGHEQGI- 76
H V V FS DG+ L ++S +K++ +S+ S + T KF+ + I
Sbjct: 101 HTAPVRSVDFSADGQFLVTASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIV 160
Query: 77 --SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKC 134
S+ TI++WD + + + ++F+P I S + +RIWDI+ +
Sbjct: 161 SCSEDKTIKIWDTTSKQCVNNFSDSVGFANFVDFSPNGTCIASAGSDHAVRIWDIRMNRL 220
Query: 135 LKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
L+ HS V + F+ G +VT+S DG +ILD
Sbjct: 221 LQHYQVHSCGVNCLSFHPSGNSLVTASSDGTVKILD 256
Score = 138 (53.6 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 29/84 (34%), Positives = 52/84 (61%)
Query: 82 IRLWDV-PTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDI-KTGKCLKVLP 139
+ LW + P A + + +GH + V + F+PQ N + S + ++T+R+W + + GK +
Sbjct: 42 LMLWSLKPHARAYR-YVGHKDVVTSLQFSPQGNLLASASRDKTVRLWVLDRKGKSSE-FK 99
Query: 140 AHSDPVTAIDFNRDGTMIVTSSYD 163
AH+ PV ++DF+ DG +VT+S D
Sbjct: 100 AHTAPVRSVDFSADGQFLVTASED 123
Score = 67 (28.6 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 16/71 (22%), Positives = 32/71 (45%)
Query: 164 GLYRILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKY 223
G +D S PNG I D+ +R+W+ ++L+ Y ++ C+S F +
Sbjct: 187 GFANFVDFS-PNGTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCLS--FHPSGNSL 243
Query: 224 IVSHRDPVISV 234
+ + D + +
Sbjct: 244 VTASSDGTVKI 254
Score = 50 (22.7 bits), Expect = 7.2e-14, Sum P(2) = 7.2e-14
Identities = 8/40 (20%), Positives = 22/40 (55%)
Query: 174 PNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCIS 213
P+G ++ + D T+++ + +++ T G+T + +S
Sbjct: 238 PSGNSLVTASSDGTVKILDLVEGRLIYTLQGHTGPVFTVS 277
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 181 (68.8 bits), Expect = 4.8e-12, P = 4.8e-12
Identities = 48/171 (28%), Positives = 85/171 (49%)
Query: 2 SSDRSLESFRPYT--LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS---IS 56
S D+S++ + Y +L H V KFS DGRL+ S S +KT+ + ++ ++
Sbjct: 121 SEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVN 180
Query: 57 NF-DSTPPSPLQKFTGHEQGISDLA---TIRLWDVPTATSLKTLIGHTNYVFCINFNPQS 112
NF DS + F I+ T+++WDV L+ H+ V CI+F+P
Sbjct: 181 NFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSD 240
Query: 113 NRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYD 163
N +V+ + + T++I D+ G+ + L H+ PV + F++ G + + D
Sbjct: 241 NYLVTASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGAD 291
Score = 180 (68.4 bits), Expect = 7.3e-14, Sum P(2) = 7.3e-14
Identities = 49/171 (28%), Positives = 82/171 (47%)
Query: 7 LESFRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTY---SLSSISNFDS-TP 62
L +F+P+ GH V+ V+FS G LL S+S ++T+ + S F + T
Sbjct: 44 LWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTA 103
Query: 63 PSPLQKFTGHEQGI---SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDT 119
P F+ Q + S+ +I++W + L +L HT++V C F+P IVS +
Sbjct: 104 PVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCS 163
Query: 120 FNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
++TI+IWD +C+ +DFN GT I ++ D ++ D
Sbjct: 164 EDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWD 214
Score = 171 (65.3 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 44/156 (28%), Positives = 74/156 (47%)
Query: 22 HLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS----ISNFDSTPPSPLQKFTGHEQGI- 76
H V V FS DG+ L ++S +K++ +S+ S + T KF+ + I
Sbjct: 101 HTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIV 160
Query: 77 --SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKC 134
S+ TI++WD + + ++FNP I S ++T+++WD++ K
Sbjct: 161 SCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKL 220
Query: 135 LKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
L+ HS V I F+ +VT+S DG +ILD
Sbjct: 221 LQHYQVHSGGVNCISFHPSDNYLVTASSDGTLKILD 256
Score = 134 (52.2 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 51/187 (27%), Positives = 90/187 (48%)
Query: 82 IRLWDV-PTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIW-DIKTGKCLKVLP 139
+ LW+ P A + + +GH + V + F+P N + S + + T+R+W K GK
Sbjct: 42 LMLWNFKPHARAYR-YVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGK-FSEFK 99
Query: 140 AHSDPVTAIDFNRDGTMIVTSSYD------GLYR--ILDASTPNGKFILVGTLDNTLRLW 191
AH+ PV ++DF+ DG + T+S D +YR L + + ++ RL
Sbjct: 100 AHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLI 159
Query: 192 -NYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDN 250
+ S K +K + T +K C+++ FS + G + D +P+ IAS +
Sbjct: 160 VSCSEDKTIKIWD--TTNKQCVNN-FSDSVG--FANFVD------FNPSGTCIASAG--S 206
Query: 251 DRTMKIW 257
D+T+K+W
Sbjct: 207 DQTVKVW 213
Score = 51 (23.0 bits), Expect = 7.3e-14, Sum P(2) = 7.3e-14
Identities = 8/40 (20%), Positives = 22/40 (55%)
Query: 174 PNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCIS 213
P+ +++ + D TL++ + +++ T G+T + +S
Sbjct: 238 PSDNYLVTASSDGTLKILDLLEGRLIYTLQGHTGPVFTVS 277
>CGD|CAL0005939 [details] [associations]
symbol:TUP1 species:5476 "Candida albicans" [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IGI;ISS;IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0016337 "cell-cell adhesion" evidence=IMP]
[GO:0045827 "negative regulation of isoprenoid metabolic process"
evidence=IMP] [GO:0009372 "quorum sensing" evidence=IMP]
[GO:0044409 "entry into host" evidence=IMP] [GO:0051834 "evasion or
tolerance of defenses of other organism involved in symbiotic
interaction" evidence=IMP] [GO:0009405 "pathogenesis" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035690 "cellular
response to drug" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IEA] [GO:0000433 "negative regulation of
transcription from RNA polymerase II promoter by glucose"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0043156 "chromatin remodeling in
response to cation stress" evidence=IEA] [GO:0061418 "regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001198 "negative
regulation of mating-type specific transcription from RNA
polymerase II promoter" evidence=IEA] [GO:1900429 "negative
regulation of filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:0097308
"cellular response to farnesol" evidence=IMP] [GO:0036171
"filamentous growth of a population of unicellular organisms in
response to chemical stimulus" evidence=IMP] [GO:0044114
"development of symbiont in host" evidence=IMP] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] [GO:0036033 "mediator complex binding" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0001191
"RNA polymerase II transcription factor binding transcription
factor activity involved in negative regulation of transcription"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 183 (69.5 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 58/194 (29%), Positives = 92/194 (47%)
Query: 82 IRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAH 141
IR+WD+ T +K L GH ++ ++F P +R+VS + + ++RIWD++T +C L
Sbjct: 279 IRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLSIE 338
Query: 142 SDPVTAIDFNRDGTMIVTSSYDGLYRILDAST-----------PNGK-----FILVGTLD 185
D VT + + DG +I S D R+ D++T NG V +
Sbjct: 339 -DGVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSN 397
Query: 186 NTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIAS 245
N ++ + S + +K + + K ST VT YI H+D V+SV P I S
Sbjct: 398 NGEQIASGSLDRTVKLW--HLEGKSDKKSTCEVT---YI-GHKDFVLSVCCTPDNEYILS 451
Query: 246 GALDNDRTMKIWTQ 259
G+ DR + W Q
Sbjct: 452 GS--KDRGVIFWDQ 463
Score = 144 (55.7 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 48/164 (29%), Positives = 74/164 (45%)
Query: 102 YVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSS 161
Y+ + F+P + + ++ IRIWD+ T + +K+L H + ++DF DG +V+ S
Sbjct: 257 YIRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGS 316
Query: 162 YDGLYRILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISST-FSV-- 218
D RI D T L D + K++ S + S+T F V
Sbjct: 317 GDRSVRIWDLRTSQCSLTL-SIEDGVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVER 375
Query: 219 --TNGKYIVSHRDPVISVASHPAKNIIASGALDNDRTMKIWTQE 260
+ + H D V SVA IASG+LD RT+K+W E
Sbjct: 376 LDSGNENGNGHEDSVYSVAFSNNGEQIASGSLD--RTVKLWHLE 417
Score = 128 (50.1 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 55/218 (25%), Positives = 99/218 (45%)
Query: 18 TLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS-----ISNFDSTPPSPLQKFTGH 72
T +G L S V FS DG+LL + + +K + + LS+ I L F
Sbjct: 251 TASGDLYIRS-VCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDG 309
Query: 73 EQGISDLA--TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIK 130
++ +S ++R+WD+ T+ TL + V + +P I + + + T+R+WD
Sbjct: 310 DRLVSGSGDRSVRIWDLRTSQCSLTL-SIEDGVTTVAVSPDGKLIAAGSLDRTVRVWDST 368
Query: 131 TGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRL 190
TG ++ L + ++ N +G D +Y + A + NG+ I G+LD T++L
Sbjct: 369 TGFLVERLDSGNE-------NGNG------HEDSVYSV--AFSNNGEQIASGSLDRTVKL 413
Query: 191 WNYSTRKILKTYSG--YTNSKYCISSTFSVTNGKYIVS 226
W+ + K+ Y K + S + +YI+S
Sbjct: 414 WHLEGKSDKKSTCEVTYIGHKDFVLSVCCTPDNEYILS 451
Score = 122 (48.0 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 30/116 (25%), Positives = 61/116 (52%)
Query: 97 IGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTM 156
+ H++ V C+ F+ + + ++ N+T +++++ TG+ + L S + N+D
Sbjct: 197 LDHSSVVCCVRFS-RDGKFIATGCNKTTQVFNVTTGELVAKLIDESS-----NENKDDN- 249
Query: 157 IVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCI 212
T+S D LY +P+GK + G D +R+W+ ST++I+K G+ Y +
Sbjct: 250 -TTASGD-LYIRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSL 303
Score = 45 (20.9 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 9/33 (27%), Positives = 19/33 (57%)
Query: 22 HLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS 54
H V V+FS DG+ + ++ KT +++++
Sbjct: 199 HSSVVCCVRFSRDGKFI-ATGCNKTTQVFNVTT 230
Score = 45 (20.9 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 227 HRDPVISVA----SHPAKNIIASGALDNDRTMKIWTQE 260
HR+ VISVA S + I A+G+ D + WT++
Sbjct: 475 HRNSVISVAVSLNSKGTEGIFATGSGDCKARIWKWTKK 512
>UNIPROTKB|P0CY34 [details] [associations]
symbol:TUP1 "Transcriptional repressor TUP1" species:237561
"Candida albicans SC5314" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009372 "quorum sensing" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016337 "cell-cell adhesion"
evidence=IMP] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0035690 "cellular response to drug" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036171 "filamentous growth of a
population of unicellular organisms in response to chemical
stimulus" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0044114 "development of symbiont in host"
evidence=IMP] [GO:0044182 "filamentous growth of a population of
unicellular organisms" evidence=IMP] [GO:0044409 "entry into host"
evidence=IMP] [GO:0045827 "negative regulation of isoprenoid
metabolic process" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IGI;IMP] [GO:0051834
"evasion or tolerance of defenses of other organism involved in
symbiotic interaction" evidence=IMP] [GO:0071216 "cellular response
to biotic stimulus" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0097308 "cellular response to
farnesol" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 183 (69.5 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 58/194 (29%), Positives = 92/194 (47%)
Query: 82 IRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAH 141
IR+WD+ T +K L GH ++ ++F P +R+VS + + ++RIWD++T +C L
Sbjct: 279 IRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLSIE 338
Query: 142 SDPVTAIDFNRDGTMIVTSSYDGLYRILDAST-----------PNGK-----FILVGTLD 185
D VT + + DG +I S D R+ D++T NG V +
Sbjct: 339 -DGVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSN 397
Query: 186 NTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIAS 245
N ++ + S + +K + + K ST VT YI H+D V+SV P I S
Sbjct: 398 NGEQIASGSLDRTVKLW--HLEGKSDKKSTCEVT---YI-GHKDFVLSVCCTPDNEYILS 451
Query: 246 GALDNDRTMKIWTQ 259
G+ DR + W Q
Sbjct: 452 GS--KDRGVIFWDQ 463
Score = 144 (55.7 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 48/164 (29%), Positives = 74/164 (45%)
Query: 102 YVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSS 161
Y+ + F+P + + ++ IRIWD+ T + +K+L H + ++DF DG +V+ S
Sbjct: 257 YIRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGS 316
Query: 162 YDGLYRILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISST-FSV-- 218
D RI D T L D + K++ S + S+T F V
Sbjct: 317 GDRSVRIWDLRTSQCSLTL-SIEDGVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVER 375
Query: 219 --TNGKYIVSHRDPVISVASHPAKNIIASGALDNDRTMKIWTQE 260
+ + H D V SVA IASG+LD RT+K+W E
Sbjct: 376 LDSGNENGNGHEDSVYSVAFSNNGEQIASGSLD--RTVKLWHLE 417
Score = 128 (50.1 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 55/218 (25%), Positives = 99/218 (45%)
Query: 18 TLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS-----ISNFDSTPPSPLQKFTGH 72
T +G L S V FS DG+LL + + +K + + LS+ I L F
Sbjct: 251 TASGDLYIRS-VCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDG 309
Query: 73 EQGISDLA--TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIK 130
++ +S ++R+WD+ T+ TL + V + +P I + + + T+R+WD
Sbjct: 310 DRLVSGSGDRSVRIWDLRTSQCSLTL-SIEDGVTTVAVSPDGKLIAAGSLDRTVRVWDST 368
Query: 131 TGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRL 190
TG ++ L + ++ N +G D +Y + A + NG+ I G+LD T++L
Sbjct: 369 TGFLVERLDSGNE-------NGNG------HEDSVYSV--AFSNNGEQIASGSLDRTVKL 413
Query: 191 WNYSTRKILKTYSG--YTNSKYCISSTFSVTNGKYIVS 226
W+ + K+ Y K + S + +YI+S
Sbjct: 414 WHLEGKSDKKSTCEVTYIGHKDFVLSVCCTPDNEYILS 451
Score = 122 (48.0 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 30/116 (25%), Positives = 61/116 (52%)
Query: 97 IGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTM 156
+ H++ V C+ F+ + + ++ N+T +++++ TG+ + L S + N+D
Sbjct: 197 LDHSSVVCCVRFS-RDGKFIATGCNKTTQVFNVTTGELVAKLIDESS-----NENKDDN- 249
Query: 157 IVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCI 212
T+S D LY +P+GK + G D +R+W+ ST++I+K G+ Y +
Sbjct: 250 -TTASGD-LYIRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSL 303
Score = 45 (20.9 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 9/33 (27%), Positives = 19/33 (57%)
Query: 22 HLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS 54
H V V+FS DG+ + ++ KT +++++
Sbjct: 199 HSSVVCCVRFSRDGKFI-ATGCNKTTQVFNVTT 230
Score = 45 (20.9 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 227 HRDPVISVA----SHPAKNIIASGALDNDRTMKIWTQE 260
HR+ VISVA S + I A+G+ D + WT++
Sbjct: 475 HRNSVISVAVSLNSKGTEGIFATGSGDCKARIWKWTKK 512
>CGD|CAL0004039 [details] [associations]
symbol:orf19.3301 species:5476 "Candida albicans" [GO:0043224
"nuclear SCF ubiquitin ligase complex" evidence=IEA] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IEA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=IEA] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0000114 "regulation of
transcription involved in G1 phase of mitotic cell cycle"
evidence=IEA] [GO:0046686 "response to cadmium ion" evidence=IEA]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IEA]
[GO:0046685 "response to arsenic-containing substance"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA]
[GO:0030674 "protein binding, bridging" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 CGD:CAL0004039
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AACQ01000045 EMBL:AACQ01000042 KO:K10259
RefSeq:XP_718124.1 RefSeq:XP_718393.1 ProteinModelPortal:Q5A933
STRING:Q5A933 GeneID:3639919 GeneID:3640178 KEGG:cal:CaO19.10811
KEGG:cal:CaO19.3301 Uniprot:Q5A933
Length = 735
Score = 156 (60.0 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 47/175 (26%), Positives = 88/175 (50%)
Query: 85 WDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDP 144
W T T +KT GH++ V C+ FN + +++ +++ TI+IW I +G+C+K L H+
Sbjct: 369 WRKGTHT-IKTFTGHSDGVTCLQFNRKY--LMTGSYDTTIKIWKIDSGECVKTLTGHTKG 425
Query: 145 VTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILV--GTLDNTLRLWNYSTRKILKTY 202
V A+ F D +++ D ++ + T G+ I G D + + +++ + I+
Sbjct: 426 VRALVF--DNQKLISGGLDSTIKVWNYHT--GQCIATYRGHEDAVVSV-DFTNKSIVSGS 480
Query: 203 SGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDNDRTMKIW 257
+ +T + + S T + H D V V H A N I S + +D T+++W
Sbjct: 481 ADHTVRVWHVDSRTCYT----LRGHTDWVNHVKIHSASNTIFSAS--DDTTIRMW 529
Score = 153 (58.9 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 37/123 (30%), Positives = 63/123 (51%)
Query: 66 LQKFTGHEQGISDL-------------ATIRLWDVPTATSLKTLIGHTNYVFCINFNPQS 112
++ FTGH G++ L TI++W + + +KTL GHT V + F+ Q
Sbjct: 376 IKTFTGHSDGVTCLQFNRKYLMTGSYDTTIKIWKIDSGECVKTLTGHTKGVRALVFDNQ- 434
Query: 113 NRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRI--LD 170
+++S + TI++W+ TG+C+ H D V ++DF IV+ S D R+ +D
Sbjct: 435 -KLISGGLDSTIKVWNYHTGQCIATYRGHEDAVVSVDFTNKS--IVSGSADHTVRVWHVD 491
Query: 171 AST 173
+ T
Sbjct: 492 SRT 494
Score = 134 (52.2 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 38/127 (29%), Positives = 66/127 (51%)
Query: 17 QTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS---ISNFDSTPPSPLQ-KFTGH 72
+TL GH + V + F D + L S + T+ ++ + I+ + + + FT
Sbjct: 417 KTLTGHTKGVRALVF--DNQKLISGGLDSTIKVWNYHTGQCIATYRGHEDAVVSVDFTNK 474
Query: 73 E--QGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIK 130
G +D T+R+W V + T TL GHT++V + + SN I S + + TIR+WD+
Sbjct: 475 SIVSGSAD-HTVRVWHVDSRTCY-TLRGHTDWVNHVKIHSASNTIFSASDDTTIRMWDMN 532
Query: 131 TGKCLKV 137
+ +C+KV
Sbjct: 533 SNECIKV 539
Score = 115 (45.5 bits), Expect = 0.00088, P = 0.00088
Identities = 23/62 (37%), Positives = 36/62 (58%)
Query: 81 TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPA 140
TI+LWDV T ++T GH V+ I + + RI+S + I++WD++ GKCL
Sbjct: 649 TIKLWDVATGKCIRTQFGHIEGVWSIAAD--TFRIISGAHDRLIKVWDLQNGKCLHTFSN 706
Query: 141 HS 142
+S
Sbjct: 707 NS 708
Score = 91 (37.1 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 171 ASTPNG--KFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISS-TFSVTNGKY 223
A+TPN L LDNT++LW+ +T K ++T G+ + I++ TF + +G +
Sbjct: 631 ATTPNSYPTHFLTSALDNTIKLWDVATGKCIRTQFGHIEGVWSIAADTFRIISGAH 686
Score = 49 (22.3 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 179 ILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCI 212
I+ G D +++W+ K L T+S +S C+
Sbjct: 681 IISGAHDRLIKVWDLQNGKCLHTFSN-NSSVSCV 713
>ZFIN|ZDB-GENE-040426-1851 [details] [associations]
symbol:wdr61 "WD repeat domain 61" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016593 "Cdc73/Paf1 complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0055087 "Ski
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1851 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0032968 GO:GO:0016593 GO:GO:0055087 CTD:80349
HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW EMBL:BC062834
IPI:IPI00484493 RefSeq:NP_957147.1 UniGene:Dr.122500
ProteinModelPortal:Q6P5M2 STRING:Q6P5M2 PRIDE:Q6P5M2 DNASU:393827
GeneID:393827 KEGG:dre:393827 NextBio:20814815 Uniprot:Q6P5M2
Length = 305
Score = 186 (70.5 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 66/259 (25%), Positives = 114/259 (44%)
Query: 15 LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQK----FT 70
L TL GH V V S +G + SSS + + + L + S P+ F+
Sbjct: 56 LQWTLEGHQLGVVSVNISQNGAIAASSSLDAHIRLWDLETGKQIKSMDAGPVDAWTVAFS 115
Query: 71 GHEQGI---SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIW 127
+ I S L + ++ V + +L ++ I ++P + S + I I+
Sbjct: 116 PDSKYIATGSHLGKVNIFGVESGKKEHSLDTRGKFILSIAYSPDGKYLASGAIDGIINIF 175
Query: 128 DIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPN--------GKFI 179
DI TGK L L H+ P+ ++ F+ D ++VT+S DG +I D N G ++
Sbjct: 176 DIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWV 235
Query: 180 L-VGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHP 238
L V + + S+ K +K + T+S+ C+++ F H+D V SV +P
Sbjct: 236 LSVAFSPDDTHFVSSSSDKSIKVWD--TSSRSCVNTFFD---------HQDQVWSVKYNP 284
Query: 239 AKNIIASGALDNDRTMKIW 257
+ I S +DR + I+
Sbjct: 285 TGSKIVSAG--DDRAIHIY 301
Score = 149 (57.5 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 37/149 (24%), Positives = 73/149 (48%)
Query: 29 VKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTP--PSPLQK--FTGHEQGI---SDLAT 81
+ +S DG+ L S + + + + +++ + P++ F+ Q + SD
Sbjct: 154 IAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGY 213
Query: 82 IRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAH 141
I+++DV A TL GH ++V + F+P VS + +++I++WD + C+ H
Sbjct: 214 IKIYDVQHANLAGTLSGHGSWVLSVAFSPDDTHFVSSSSDKSIKVWDTSSRSCVNTFFDH 273
Query: 142 SDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
D V ++ +N G+ IV++ D I D
Sbjct: 274 QDQVWSVKYNPTGSKIVSAGDDRAIHIYD 302
>FB|FBgn0027524 [details] [associations]
symbol:CG3909 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GeneTree:ENSGT00700000104507 KO:K12602 EMBL:AF132174
RefSeq:NP_649969.1 UniGene:Dm.3198 SMR:Q9XZ19 IntAct:Q9XZ19
MINT:MINT-1753051 STRING:Q9XZ19 EnsemblMetazoa:FBtr0082172
GeneID:41226 KEGG:dme:Dmel_CG3909 UCSC:CG3909-RA
FlyBase:FBgn0027524 InParanoid:Q9XZ19 OMA:HETWVEC OrthoDB:EOG4R7SSH
GenomeRNAi:41226 NextBio:822821 Uniprot:Q9XZ19
Length = 331
Score = 153 (58.9 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 50/181 (27%), Positives = 84/181 (46%)
Query: 15 LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYS--------LSSISNFD--STPPS 64
L L GH V V S DG+ + SSS + T+ + L S D + S
Sbjct: 77 LRHKLKGHALGVVSVAVSSDGQTIASSSLDSTMCLWDARSGDKKHLLSFGPVDLWTVQFS 136
Query: 65 PLQKFTGHEQGISDLATIRLWDVPTATSLKTLIGHTN-YVFCINFNPQSNRIVSDTFNET 123
P K+ G++D I ++ V T + +TL Y I ++P I S +
Sbjct: 137 PCNKYV--ISGLND-GKISMYSVETGKAEQTLDAQNGKYTLSIAYSPDGKYIASGAIDGI 193
Query: 124 IRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGT 183
I I+D+ GK ++ L H+ PV ++ F+ + +++T+S DG ++ D + + +VGT
Sbjct: 194 ITIFDVAAGKVVQTLEGHAMPVRSLCFSPNSQLLLTASDDGHMKLYDVTHSD----VVGT 249
Query: 184 L 184
L
Sbjct: 250 L 250
Score = 136 (52.9 bits), Expect = 9.6e-07, P = 9.6e-07
Identities = 31/143 (21%), Positives = 70/143 (48%)
Query: 29 VKFSHDGRLLTSSSAEKTLLTYSLSS---ISNFDSTPPSPLQK--FTGHEQGI---SDLA 80
+ +S DG+ + S + + + + +++ + + P++ F+ + Q + SD
Sbjct: 176 IAYSPDGKYIASGAIDGIITIFDVAAGKVVQTLEGHA-MPVRSLCFSPNSQLLLTASDDG 234
Query: 81 TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPA 140
++L+DV + + TL GH ++V C+ F+ S + + +++IWD KCL
Sbjct: 235 HMKLYDVTHSDVVGTLSGHASWVLCVAFSEDGKHFASSSSDNSVKIWDTSERKCLHTFAE 294
Query: 141 HSDPVTAIDFNRDGTMIVTSSYD 163
H+D V + ++ + ++S D
Sbjct: 295 HTDQVWGVRYSPGNDKVASASED 317
Score = 111 (44.1 bits), Expect = 0.00076, P = 0.00076
Identities = 41/148 (27%), Positives = 67/148 (45%)
Query: 115 IVSDTFNETIRIWDIKTGKCLKV---LPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDA 171
+V+ ++ +++WD++ LK+ L H+ V ++ + DG I +SS D + DA
Sbjct: 55 LVTGGLDDLVKVWDLQEDNTLKLRHKLKGHALGVVSVAVSSDGQTIASSSLDSTMCLWDA 114
Query: 172 STPNGKFIL-VGTLDNTLRLWNYSTRKILK-TYSGYTNSK---YCISS-----TFSVTNG 221
+ + K +L G +D LW K SG + K Y + + T NG
Sbjct: 115 RSGDKKHLLSFGPVD----LWTVQFSPCNKYVISGLNDGKISMYSVETGKAEQTLDAQNG 170
Query: 222 KYIVSHRDPVISVASHPAKNIIASGALD 249
KY +S+A P IASGA+D
Sbjct: 171 KY-------TLSIAYSPDGKYIASGAID 191
Score = 77 (32.2 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 18/73 (24%), Positives = 38/73 (52%)
Query: 171 ASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDP 230
A + +GK + DN++++W+ S RK L T++ +T+ + + +S N K + D
Sbjct: 261 AFSEDGKHFASSSSDNSVKIWDTSERKCLHTFAEHTDQVWGVR--YSPGNDKVASASEDK 318
Query: 231 VISVASHPAKNII 243
+++ P I+
Sbjct: 319 SLNIYYCPPNAIV 331
>TAIR|locus:2060560 [details] [associations]
symbol:LIS "AT2G41500" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS;RCA] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0016607 "nuclear speck" evidence=IDA] [GO:0007267
"cell-cell signaling" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000741 "karyogamy" evidence=RCA] [GO:0006312
"mitotic recombination" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0009909 "regulation of flower development" evidence=RCA]
[GO:0009933 "meristem structural organization" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010182
"sugar mediated signaling pathway" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010388 "cullin deneddylation" evidence=RCA]
[GO:0016567 "protein ubiquitination" evidence=RCA] [GO:0016571
"histone methylation" evidence=RCA] [GO:0016579 "protein
deubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007267 GO:GO:0005681
EMBL:AC002510 GO:GO:0000398 GO:GO:0001709 EMBL:AC004625
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 EMBL:BT008700 EMBL:BT020589 EMBL:AK229530
IPI:IPI00545392 PIR:T00806 RefSeq:NP_181681.1 UniGene:At.12395
UniGene:At.42825 ProteinModelPortal:O22212 SMR:O22212 STRING:O22212
PaxDb:O22212 PRIDE:O22212 EnsemblPlants:AT2G41500.1 GeneID:818748
KEGG:ath:AT2G41500 GeneFarm:4669 TAIR:At2g41500
HOGENOM:HOG000157615 InParanoid:O22212 KO:K12662 OMA:CIATVSH
PhylomeDB:O22212 ProtClustDB:CLSN2683778 Genevestigator:O22212
GermOnline:AT2G41500 GO:GO:0009560 Uniprot:O22212
Length = 554
Score = 186 (70.5 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 49/173 (28%), Positives = 88/173 (50%)
Query: 2 SSDRSLESFRPY-TLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDS 60
S+DR+ + ++ TL QT GHL ++ V F G+ L ++S +KT + +++ +
Sbjct: 317 SADRTAKLWKTDGTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLL 376
Query: 61 TPPSPLQKF-TGHEQ--------GISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQ 111
+ +Q G+ LA R+WD+ T S+ GH VF +NF+P
Sbjct: 377 QEGHSRSVYGIAFQQDGALAASCGLDSLA--RVWDLRTGRSILVFQGHIKPVFSVNFSPN 434
Query: 112 SNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFN-RDGTMIVTSSYD 163
+ S + RIWD++ K L ++PAH++ V+ + + ++G + T+SYD
Sbjct: 435 GYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYD 487
Score = 168 (64.2 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 62/249 (24%), Positives = 101/249 (40%)
Query: 19 LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS--ISNFDSTPPSPLQKFTGHEQG- 75
L H + V FS L ++SA++T + + F+ L + H G
Sbjct: 294 LKDHKERATDVVFSPVDDCLATASADRTAKLWKTDGTLLQTFEGHLDR-LARVAFHPSGK 352
Query: 76 ----ISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKT 131
S T RLWD+ T L GH+ V+ I F S + R+WD++T
Sbjct: 353 YLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRT 412
Query: 132 GKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLW 191
G+ + V H PV +++F+ +G + + D RI D +I+ N +
Sbjct: 413 GRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHA-NLVSQV 471
Query: 192 NYSTRK--ILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALD 249
Y ++ L T S FS+ K + H V S+ + IA+ +
Sbjct: 472 KYEPQEGYFLATASYDMKVNIWSGRDFSLV--KSLAGHESKVASLDITADSSCIAT--VS 527
Query: 250 NDRTMKIWT 258
+DRT+K+WT
Sbjct: 528 HDRTIKLWT 536
Score = 166 (63.5 bits), Expect = 6.7e-10, P = 6.7e-10
Identities = 59/247 (23%), Positives = 102/247 (41%)
Query: 21 GHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGHE-QGISD- 78
G R ++ FS DG++L + S + + ++N + ++ T + D
Sbjct: 253 GDDRPLTGCSFSRDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVVFSPVDDC 312
Query: 79 LATI------RLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTG 132
LAT +LW T L+T GH + + + F+P + + ++++T R+WDI TG
Sbjct: 313 LATASADRTAKLWKTD-GTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTG 371
Query: 133 KCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWN 192
L + HS V I F +DG + + D L R+ D T + G + + N
Sbjct: 372 AELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSV-N 430
Query: 193 YSTRKILKTYSGYTNSKYCISSTFSVTNGKYIV-SHRDPVISVASHPAKNIIASGALDND 251
+S G N C + YI+ +H + V V P + + A D
Sbjct: 431 FSPNGYHLASGGEDNQ--CRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATA-SYD 487
Query: 252 RTMKIWT 258
+ IW+
Sbjct: 488 MKVNIWS 494
Score = 124 (48.7 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 41/161 (25%), Positives = 67/161 (41%)
Query: 21 GHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLS---SISNFDS-TPPSPLQKFT--GHE- 73
GH R+V + F DG L S + + L SI F P F+ G+
Sbjct: 379 GHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHL 438
Query: 74 -QGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSD-TFNETIRIWDIKT 131
G D R+WD+ SL + H N V + + PQ ++ +++ + IW +
Sbjct: 439 ASGGED-NQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRD 497
Query: 132 GKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDAS 172
+K L H V ++D D + I T S+D ++ +S
Sbjct: 498 FSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLWTSS 538
Score = 36 (17.7 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 11/44 (25%), Positives = 22/44 (50%)
Query: 152 RDGTMIVT-SSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYS 194
RD +++ + + ++ LD T + I + D T++LW S
Sbjct: 496 RDFSLVKSLAGHESKVASLDI-TADSSCIATVSHDRTIKLWTSS 538
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 186 (70.5 bits), Expect = 4.5e-13, P = 4.5e-13
Identities = 65/259 (25%), Positives = 109/259 (42%)
Query: 11 RPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTY--SLSSISNFDSTPPSPLQK 68
+P + GH AV+ V FS G LL S S +KT+ + ++ S + ++
Sbjct: 11 KPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRS 70
Query: 69 --FTGHEQGI---SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNET 123
F Q SD T+++W L +L H N+V C F+P IVS + ++T
Sbjct: 71 VHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKT 130
Query: 124 IRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPN--GKFILV 181
+++WD + +C+ H VT +DF+ GT I + D ++ D T + L
Sbjct: 131 VKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLH 190
Query: 182 GTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVS---HRDPVISVASHP 238
N L + + L T S + K + G+ + + H+ P +VA
Sbjct: 191 SAAVNGLSF--HPSGNYLITASSDSTLKI-----LDLMEGRLLYTLHGHQGPATTVAFSR 243
Query: 239 AKNIIASGALDNDRTMKIW 257
ASG +D + +W
Sbjct: 244 TGEYFASGG--SDEQVMVW 260
Score = 161 (61.7 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 45/180 (25%), Positives = 86/180 (47%)
Query: 2 SSDRSLESFRPYTLTQT--LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYS------LS 53
S D+++ + P ++ H V V F DG+ ++S +KT+ ++ L
Sbjct: 42 SRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLF 101
Query: 54 SISNFDSTPPSPLQKFTGHEQGI---SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNP 110
S+S + KF+ + I SD T++LWD + + + H +V ++F+P
Sbjct: 102 SLSQHINWVRCA--KFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHP 159
Query: 111 QSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
I + + T+++WD++T + L+ HS V + F+ G ++T+S D +ILD
Sbjct: 160 SGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILD 219
Score = 147 (56.8 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 51/181 (28%), Positives = 86/181 (47%)
Query: 82 IRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIW--DIKTGKCLKVLP 139
+ +W + + GH + V C+NF+P + + S + ++T+RIW ++K G+ V
Sbjct: 5 LMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVK-GEST-VFR 62
Query: 140 AHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFIL-VGTLDNTLRLWNYST--R 196
AH+ V ++ F DG VT+S D ++ +T KF+ + N +R +S R
Sbjct: 63 AHTATVRSVHFCSDGQSFVTASDDKTVKVW--ATHRQKFLFSLSQHINWVRCAKFSPDGR 120
Query: 197 KILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDNDRTMKI 256
I+ T + SS V + Y H V V HP+ IA+ +DN T+K+
Sbjct: 121 LIVSASDDKTVKLWDKSSRECVHS--YC-EHGGFVTYVDFHPSGTCIAAAGMDN--TVKV 175
Query: 257 W 257
W
Sbjct: 176 W 176
>SGD|S000000402 [details] [associations]
symbol:TAF5 "Subunit (90 kDa) of TFIID and SAGA complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0051123 "RNA polymerase
II transcriptional preinitiation complex assembly" evidence=IC]
[GO:0005669 "transcription factor TFIID complex" evidence=IDA]
[GO:0032947 "protein complex scaffold" evidence=IMP] [GO:0000124
"SAGA complex" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0016568 "chromatin modification" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046695 "SLIK (SAGA-like) complex"
evidence=IDA] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 SGD:S000000402 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003682
EMBL:BK006936 GO:GO:0000124 GO:GO:0046695 InterPro:IPR013720
Pfam:PF08513 EMBL:Z21487 GO:GO:0032947 GO:GO:0043130 GO:GO:0005669
GO:GO:0051123 GeneTree:ENSGT00700000104377 KO:K03130
HOGENOM:HOG000212424 OrthoDB:EOG4S1XG9 EMBL:Z36067 EMBL:AY692890
PIR:S34023 RefSeq:NP_009757.1 PDB:2J49 PDBsum:2J49
ProteinModelPortal:P38129 SMR:P38129 DIP:DIP-740N IntAct:P38129
MINT:MINT-475651 STRING:P38129 PaxDb:P38129 PeptideAtlas:P38129
EnsemblFungi:YBR198C GeneID:852497 KEGG:sce:YBR198C CYGD:YBR198c
OMA:PNINYLA EvolutionaryTrace:P38129 NextBio:971495
Genevestigator:P38129 GermOnline:YBR198C Uniprot:P38129
Length = 798
Score = 189 (71.6 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 50/164 (30%), Positives = 78/164 (47%)
Query: 17 QTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS----ISNFDSTPPSPLQKFT-- 70
+TL GH V FS D + L S S +KT+ +S+ + +S P F+
Sbjct: 519 KTLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPL 578
Query: 71 GHEQGI-SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDI 129
GH S T RLW L+ GH N V C++F+P + + + ++T R+WD+
Sbjct: 579 GHYFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDV 638
Query: 130 KTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDAST 173
TG +++ H+ PV +I DG + T S DG+ + D T
Sbjct: 639 STGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDIGT 682
Score = 159 (61.0 bits), Expect = 8.4e-09, P = 8.4e-09
Identities = 50/206 (24%), Positives = 96/206 (46%)
Query: 60 STPPSPLQKFTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDT 119
ST SP K+ G D T+RLW + T T+L + GH + V+ ++F+P + + +
Sbjct: 530 STSFSPDNKYL--LSGSED-KTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLGHYFATAS 586
Query: 120 FNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFI 179
++T R+W L++ H + V + F+ +G + T S D R+ D ST + +
Sbjct: 587 HDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDVSTGDSVRL 646
Query: 180 LVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHR----DPVISVA 235
+G + + + L T S+ I + + + GK + R + + S++
Sbjct: 647 FLGHTAPVISIAVCPDGRWLST-----GSEDGIINVWDIGTGKRLKQMRGHGKNAIYSLS 701
Query: 236 SHPAKNIIASGALDNDRTMKIWTQEK 261
N++ SG D+ T+++W +K
Sbjct: 702 YSKEGNVLISGGADH--TVRVWDLKK 725
Score = 156 (60.0 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 50/184 (27%), Positives = 86/184 (46%)
Query: 2 SSDRSLE--SFRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSI---- 55
S D+++ S +T + GH V V FS G ++S ++T +S I
Sbjct: 544 SEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLGHYFATASHDQTARLWSCDHIYPLR 603
Query: 56 ------SNFD--STPPSPLQKFTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCIN 107
++ D S P+ FTG SD T R+WDV T S++ +GHT V I
Sbjct: 604 IFAGHLNDVDCVSFHPNGCYVFTGS----SD-KTCRMWDVSTGDSVRLFLGHTAPVISIA 658
Query: 108 FNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHS-DPVTAIDFNRDGTMIVTSSYDGLY 166
P + + + + I +WDI TGK LK + H + + ++ ++++G ++++ D
Sbjct: 659 VCPDGRWLSTGSEDGIINVWDIGTGKRLKQMRGHGKNAIYSLSYSKEGNVLISGGADHTV 718
Query: 167 RILD 170
R+ D
Sbjct: 719 RVWD 722
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 177 (67.4 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 50/171 (29%), Positives = 83/171 (48%)
Query: 7 LESFRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLS---SISNFDS-TP 62
L S +P+ GH V+ ++FS G LL S+S ++T+ + L S F + T
Sbjct: 44 LWSLKPHARAYRYVGHKDVVTSLQFSPQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTA 103
Query: 63 PSPLQKFTGHEQGI---SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDT 119
P F+ Q + S+ +I++W + L +L HT++V C F+P IVS +
Sbjct: 104 PVRSVDFSADGQLLVTASEDKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCS 163
Query: 120 FNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
++TI+IWD +C+ +DFN +GT I ++ D +I D
Sbjct: 164 EDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHAVKIWD 214
Score = 175 (66.7 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 47/172 (27%), Positives = 89/172 (51%)
Query: 2 SSDRSLE---SFRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS---I 55
S D+S++ FR L +L H V KFS DGRL+ S S +KT+ + ++ +
Sbjct: 121 SEDKSIKVWSMFRQRFL-YSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCV 179
Query: 56 SNF-DSTPPSPLQKFTGHEQGISDLAT---IRLWDVPTATSLKTLIGHTNYVFCINFNPQ 111
+NF DS + F + I+ + +++WD+ L+ H+ V C++F+P
Sbjct: 180 NNFSDSVGFANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCLSFHPL 239
Query: 112 SNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYD 163
N +V+ + + T+++ D+ G+ + L H+ PV + F++DG ++ + D
Sbjct: 240 GNSLVTASSDGTVKMLDLIEGRLIYTLQGHTGPVFTVSFSKDGELLTSGGAD 291
Score = 165 (63.1 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 45/156 (28%), Positives = 74/156 (47%)
Query: 22 HLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS----ISNFDSTPPSPLQKFTGHEQGI- 76
H V V FS DG+LL ++S +K++ +S+ S + T KF+ + I
Sbjct: 101 HTAPVRSVDFSADGQLLVTASEDKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIV 160
Query: 77 --SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKC 134
S+ TI++WD + + ++FNP I S + ++IWDI+ K
Sbjct: 161 SCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHAVKIWDIRMNKL 220
Query: 135 LKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
L+ HS V + F+ G +VT+S DG ++LD
Sbjct: 221 LQHYQVHSCGVNCLSFHPLGNSLVTASSDGTVKMLD 256
Score = 139 (54.0 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 29/84 (34%), Positives = 52/84 (61%)
Query: 82 IRLWDV-PTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDI-KTGKCLKVLP 139
+ LW + P A + + +GH + V + F+PQ N + S + + T+R+W + + GK +
Sbjct: 42 LMLWSLKPHARAYR-YVGHKDVVTSLQFSPQGNLLASASRDRTVRLWVLDRKGKSSE-FK 99
Query: 140 AHSDPVTAIDFNRDGTMIVTSSYD 163
AH+ PV ++DF+ DG ++VT+S D
Sbjct: 100 AHTAPVRSVDFSADGQLLVTASED 123
Score = 60 (26.2 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 13/50 (26%), Positives = 25/50 (50%)
Query: 164 GLYRILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCIS 213
G +D + PNG I D+ +++W+ K+L+ Y ++ C+S
Sbjct: 187 GFANFVDFN-PNGTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCLS 235
Score = 48 (22.0 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 12/53 (22%), Positives = 28/53 (52%)
Query: 174 PNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVS 226
P G ++ + D T+++ + +++ T G+T + +S FS +G+ + S
Sbjct: 238 PLGNSLVTASSDGTVKMLDLIEGRLIYTLQGHTGPVFTVS--FS-KDGELLTS 287
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 186 (70.5 bits), Expect = 6.0e-13, P = 6.0e-13
Identities = 65/259 (25%), Positives = 109/259 (42%)
Query: 11 RPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTY--SLSSISNFDSTPPSPLQK 68
+P + GH AV+ V FS G LL S S +KT+ + ++ S + ++
Sbjct: 49 KPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRS 108
Query: 69 --FTGHEQGI---SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNET 123
F Q SD T+++W L +L H N+V C F+P IVS + ++T
Sbjct: 109 VHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKT 168
Query: 124 IRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPN--GKFILV 181
+++WD + +C+ H VT +DF+ GT I + D ++ D T + L
Sbjct: 169 VKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLH 228
Query: 182 GTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVS---HRDPVISVASHP 238
N L + + L T S + K + G+ + + H+ P +VA
Sbjct: 229 SAAVNGLSF--HPSGNYLITASSDSTLKI-----LDLMEGRLLYTLHGHQGPATTVAFSR 281
Query: 239 AKNIIASGALDNDRTMKIW 257
ASG +D + +W
Sbjct: 282 TGEYFASGG--SDEQVMVW 298
Score = 161 (61.7 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 45/180 (25%), Positives = 86/180 (47%)
Query: 2 SSDRSLESFRPYTLTQT--LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYS------LS 53
S D+++ + P ++ H V V F DG+ ++S +KT+ ++ L
Sbjct: 80 SRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLF 139
Query: 54 SISNFDSTPPSPLQKFTGHEQGI---SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNP 110
S+S + KF+ + I SD T++LWD + + + H +V ++F+P
Sbjct: 140 SLSQHINWVRCA--KFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHP 197
Query: 111 QSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
I + + T+++WD++T + L+ HS V + F+ G ++T+S D +ILD
Sbjct: 198 SGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILD 257
Score = 147 (56.8 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 51/181 (28%), Positives = 86/181 (47%)
Query: 82 IRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIW--DIKTGKCLKVLP 139
+ +W + + GH + V C+NF+P + + S + ++T+RIW ++K G+ V
Sbjct: 43 LMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVK-GEST-VFR 100
Query: 140 AHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFIL-VGTLDNTLRLWNYST--R 196
AH+ V ++ F DG VT+S D ++ +T KF+ + N +R +S R
Sbjct: 101 AHTATVRSVHFCSDGQSFVTASDDKTVKVW--ATHRQKFLFSLSQHINWVRCAKFSPDGR 158
Query: 197 KILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDNDRTMKI 256
I+ T + SS V + Y H V V HP+ IA+ +DN T+K+
Sbjct: 159 LIVSASDDKTVKLWDKSSRECVHS--YC-EHGGFVTYVDFHPSGTCIAAAGMDN--TVKV 213
Query: 257 W 257
W
Sbjct: 214 W 214
Score = 132 (51.5 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 47/176 (26%), Positives = 80/176 (45%)
Query: 14 TLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGHE 73
+L + GH AV+ V FS + + L S S + L+ + + P S +FTGH+
Sbjct: 10 SLERHFKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMK--------PQSRAYRFTGHK 61
Query: 74 QGISD---------LA------TIRLWDVPTATSLKTLI-GHTNYVFCINFNPQSNRIVS 117
++ LA T+R+W VP T+ HT V ++F V+
Sbjct: 62 DAVTCVNFSPSGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQSFVT 120
Query: 118 DTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDAST 173
+ ++T+++W K L L H + V F+ DG +IV++S D ++ D S+
Sbjct: 121 ASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSS 176
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 187 (70.9 bits), Expect = 6.7e-13, P = 6.7e-13
Identities = 46/140 (32%), Positives = 72/140 (51%)
Query: 75 GISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKC 134
G D T RLWD T T + T+ GHTN+V C+ + P ++ I + + + TIR WD K G
Sbjct: 153 GSGDF-TARLWDCDTQTPIATMKGHTNWVSCVAWAPDASIIATGSMDNTIRFWDPKKGSP 211
Query: 135 L-KVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILV-GTLDNTLRLWN 192
+ L H+ P+ A+ ++ L + +G ++L G+ DNT+R+WN
Sbjct: 212 IGDALRRHTKPIMAL----------------CWQPLHLAPDSGPYLLASGSKDNTVRIWN 255
Query: 193 YSTRKILKTYSGYTNSKYCI 212
R +L T SG+T C+
Sbjct: 256 VKLRTLLFTLSGHTAPITCV 275
Score = 161 (61.7 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 50/162 (30%), Positives = 80/162 (49%)
Query: 18 TLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNF-DS----TPP------SPL 66
T+ GH VS V ++ D ++ + S + T+ + S D+ T P PL
Sbjct: 172 TMKGHTNWVSCVAWAPDASIIATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCWQPL 231
Query: 67 QKF--TGH---EQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFN 121
+G G D T+R+W+V T L TL GHT + C+ + Q N I S +++
Sbjct: 232 HLAPDSGPYLLASGSKD-NTVRIWNVKLRTLLFTLSGHTAPITCVRWGGQ-NWIYSSSYD 289
Query: 122 ETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYD 163
+TIRIWD K GKCL +L H+ V + + + ++ + +YD
Sbjct: 290 KTIRIWDAKDGKCLHILKGHAARVNHLSLSTEH-VLRSGAYD 330
Score = 151 (58.2 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 30/89 (33%), Positives = 50/89 (56%)
Query: 80 ATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLP 139
+++RLWD T L TL GH V+ ++ S +VS + + T+++WD+++ K LP
Sbjct: 411 SSVRLWDGKTGKFLATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRSKKMKFDLP 470
Query: 140 AHSDPVTAIDFNRDGTMIVTSSYDGLYRI 168
H D V A+D++ DG + + D RI
Sbjct: 471 GHEDQVFAVDWSPDGQRVASGGADKAVRI 499
Score = 150 (57.9 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 48/184 (26%), Positives = 81/184 (44%)
Query: 19 LNGHLRAVSYVKFSHDGRLLTSSSAEKT-LLTYSLSSISNFDSTPPSPLQKFTGHEQ-GI 76
L GH V+++ S + +L S + + T S S K +G
Sbjct: 306 LKGHAARVNHLSLSTE-HVLRSGAYDHTDFKPKSFSDERRKAKERYEACLKQSGERLVSA 364
Query: 77 SDLATIRLWDVPTATS-LKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCL 135
SD + LWD +T + + GH V +F+P I + +F+ ++R+WD KTGK L
Sbjct: 365 SDDLQLILWDPQKSTKPITKMHGHQKVVNHASFSPDGRCIATASFDSSVRLWDGKTGKFL 424
Query: 136 KVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRL-WNYS 194
L H V ++ D ++V+SS D ++ D + KF L G D + W+
Sbjct: 425 ATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRSKKMKFDLPGHEDQVFAVDWSPD 484
Query: 195 TRKI 198
+++
Sbjct: 485 GQRV 488
Score = 114 (45.2 bits), Expect = 0.00068, P = 0.00068
Identities = 39/138 (28%), Positives = 62/138 (44%)
Query: 81 TIRLWDVPTATSL-KTLIGHTNYVF--C---INFNPQSNR--IVSDTFNETIRIWDIKTG 132
TIR WD + + L HT + C ++ P S + S + + T+RIW++K
Sbjct: 200 TIRFWDPKKGSPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLASGSKDNTVRIWNVKLR 259
Query: 133 KCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWN 192
L L H+ P+T + + I +SSYD RI DA IL G L +
Sbjct: 260 TLLFTLSGHTAPITCVRWGGQN-WIYSSSYDKTIRIWDAKDGKCLHILKGHAARVNHL-S 317
Query: 193 YSTRKILKTYSGYTNSKY 210
ST +L++ Y ++ +
Sbjct: 318 LSTEHVLRS-GAYDHTDF 334
Score = 49 (22.3 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 12/68 (17%), Positives = 34/68 (50%)
Query: 171 ASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSH-RD 229
A + + + ++ + D TL++W+ ++K+ G+ + + + + +G+ + S D
Sbjct: 438 AWSTDSRLLVSSSQDTTLKVWDVRSKKMKFDLPGHEDQVFAVDWS---PDGQRVASGGAD 494
Query: 230 PVISVASH 237
+ + SH
Sbjct: 495 KAVRIWSH 502
>RGD|1311332 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004402
"histone acetyltransferase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0015629 "actin cytoskeleton"
evidence=IEA;ISO] [GO:0016573 "histone acetylation" evidence=ISO]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA;ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0046983 "protein dimerization
activity" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 RGD:1311332 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212 GO:GO:0006367
GO:GO:0004402 GO:GO:0005669 EMBL:CH473986 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
OrthoDB:EOG469QW7 IPI:IPI00361559 RefSeq:NP_001099835.1
UniGene:Rn.144813 Ensembl:ENSRNOT00000027482 GeneID:294018
KEGG:rno:294018 UCSC:RGD:1311332 NextBio:637428 Uniprot:D3ZH66
Length = 798
Score = 175 (66.7 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 50/179 (27%), Positives = 81/179 (45%)
Query: 19 LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSIS--------NFD--STPPSPLQK 68
L GH V FS D L SSS + T+ +SL + + N+ T SP
Sbjct: 537 LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGY 596
Query: 69 FT---GHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIR 125
+ GH++ RLW L+ GH V C F+P SN + + + + T+R
Sbjct: 597 YFVSGGHDR------VARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVR 650
Query: 126 IWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTL 184
+WD+ G C+++ H P+ ++ F+ +G + T + DG + D G ++VG L
Sbjct: 651 LWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDI----GHGLMVGEL 705
Score = 162 (62.1 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 63/244 (25%), Positives = 105/244 (43%)
Query: 19 LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGHEQGISD 78
LN + + ++ V + D L+ A+ T+ +S++ S + E SD
Sbjct: 465 LNAY-QGLTAVDVTDDSSLIAGGFADSTVRVWSVTP-KKLRSVKQASDLSLIDKE---SD 519
Query: 79 LATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVL 138
R+ D TA+ LK L GH+ V+ +F+P N ++S + + T+R+W ++T CL
Sbjct: 520 DVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGY 579
Query: 139 PAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYSTRKI 198
H+ PV F+ G V+ +D + R+ I G L + N TR
Sbjct: 580 KGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADV----N-CTR-- 632
Query: 199 LKTYSGY--TNSKYCISSTFSVTNGKYI---VSHRDPVISVASHPAKNIIASGALDNDRT 253
S Y T S + V NG + H+ P+ S+ P +A+GA D R
Sbjct: 633 FHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDG-RV 691
Query: 254 MKIW 257
+ +W
Sbjct: 692 L-LW 694
Score = 148 (57.2 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 29/97 (29%), Positives = 50/97 (51%)
Query: 75 GISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKC 134
G +D T+RLWDV ++ GH + + F+P + + + + +WDI G
Sbjct: 643 GSAD-RTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLM 701
Query: 135 LKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDA 171
+ L H+D V ++ F+RDG ++ + S D R+ DA
Sbjct: 702 VGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDA 738
Score = 136 (52.9 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 47/182 (25%), Positives = 75/182 (41%)
Query: 77 SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLK 136
S+ T+RLW + T T L GH V+ F+P VS + R+W + L+
Sbjct: 560 SEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLR 619
Query: 137 VLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYSTR 196
+ H V F+ + + T S D R+ D N I G L
Sbjct: 620 IFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNG 679
Query: 197 KILKTYSGYTNSKYCISST-FSVTNGKYIVSHRDPVISVASHPAKNIIASGALDNDRTMK 255
+ L T G T+ + + + G+ + H D V S+ I+ASG++DN T++
Sbjct: 680 RFLAT--GATDGRVLLWDIGHGLMVGE-LKGHTDTVCSLRFSRDGEILASGSMDN--TVR 734
Query: 256 IW 257
+W
Sbjct: 735 LW 736
Score = 55 (24.4 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 8/18 (44%), Positives = 15/18 (83%)
Query: 175 NGKFILVGTLDNTLRLWN 192
+G+ + G++DNT+RLW+
Sbjct: 720 DGEILASGSMDNTVRLWD 737
>UNIPROTKB|Q15542 [details] [associations]
symbol:TAF5 "Transcription initiation factor TFIID subunit
5" species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0016032
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003700
GO:GO:0046983 GO:GO:0044212 GO:GO:0006368 EMBL:AL591408
GO:GO:0006367 Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276
HOVERGEN:HBG050226 KO:K03130 CTD:6877 OMA:ERQNNQI EMBL:X95525
EMBL:U75309 EMBL:U80191 EMBL:AK223615 EMBL:AK291229 EMBL:BC052268
EMBL:BC136340 EMBL:BC136348 IPI:IPI00298925 IPI:IPI00298926
RefSeq:NP_008882.2 UniGene:Hs.96103 PDB:2NXP PDBsum:2NXP
ProteinModelPortal:Q15542 SMR:Q15542 DIP:DIP-28150N IntAct:Q15542
STRING:Q15542 PhosphoSite:Q15542 DMDM:78103206 PaxDb:Q15542
PRIDE:Q15542 Ensembl:ENST00000351396 Ensembl:ENST00000369839
GeneID:6877 KEGG:hsa:6877 UCSC:uc001kwv.3 UCSC:uc010qqq.2
GeneCards:GC10P105117 HGNC:HGNC:11539 HPA:HPA006195 HPA:HPA006474
MIM:601787 neXtProt:NX_Q15542 PharmGKB:PA36314 InParanoid:Q15542
OrthoDB:EOG469QW7 PhylomeDB:Q15542 EvolutionaryTrace:Q15542
GenomeRNAi:6877 NextBio:26855 Bgee:Q15542 CleanEx:HS_TAF5
Genevestigator:Q15542 GermOnline:ENSG00000148835 Uniprot:Q15542
Length = 800
Score = 175 (66.7 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 50/179 (27%), Positives = 81/179 (45%)
Query: 19 LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSIS--------NFD--STPPSPLQK 68
L GH V FS D L SSS + T+ +SL + + N+ T SP
Sbjct: 539 LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGY 598
Query: 69 FT---GHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIR 125
+ GH++ RLW L+ GH V C F+P SN + + + + T+R
Sbjct: 599 YFVSGGHDR------VARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVR 652
Query: 126 IWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTL 184
+WD+ G C+++ H P+ ++ F+ +G + T + DG + D G ++VG L
Sbjct: 653 LWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDI----GHGLMVGEL 707
Score = 162 (62.1 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 63/244 (25%), Positives = 105/244 (43%)
Query: 19 LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGHEQGISD 78
LN + + ++ V + D L+ A+ T+ +S++ S + E SD
Sbjct: 467 LNAY-QGLTAVDVTDDSSLIAGGFADSTVRVWSVTP-KKLRSVKQASDLSLIDKE---SD 521
Query: 79 LATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVL 138
R+ D TA+ LK L GH+ V+ +F+P N ++S + + T+R+W ++T CL
Sbjct: 522 DVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGY 581
Query: 139 PAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYSTRKI 198
H+ PV F+ G V+ +D + R+ I G L + N TR
Sbjct: 582 KGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADV----N-CTR-- 634
Query: 199 LKTYSGY--TNSKYCISSTFSVTNGKYI---VSHRDPVISVASHPAKNIIASGALDNDRT 253
S Y T S + V NG + H+ P+ S+ P +A+GA D R
Sbjct: 635 FHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDG-RV 693
Query: 254 MKIW 257
+ +W
Sbjct: 694 L-LW 696
Score = 148 (57.2 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 29/97 (29%), Positives = 50/97 (51%)
Query: 75 GISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKC 134
G +D T+RLWDV ++ GH + + F+P + + + + +WDI G
Sbjct: 645 GSAD-RTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLM 703
Query: 135 LKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDA 171
+ L H+D V ++ F+RDG ++ + S D R+ DA
Sbjct: 704 VGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDA 740
Score = 136 (52.9 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 47/182 (25%), Positives = 75/182 (41%)
Query: 77 SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLK 136
S+ T+RLW + T T L GH V+ F+P VS + R+W + L+
Sbjct: 562 SEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLR 621
Query: 137 VLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYSTR 196
+ H V F+ + + T S D R+ D N I G L
Sbjct: 622 IFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNG 681
Query: 197 KILKTYSGYTNSKYCISST-FSVTNGKYIVSHRDPVISVASHPAKNIIASGALDNDRTMK 255
+ L T G T+ + + + G+ + H D V S+ I+ASG++DN T++
Sbjct: 682 RFLAT--GATDGRVLLWDIGHGLMVGE-LKGHTDTVCSLRFSRDGEILASGSMDN--TVR 736
Query: 256 IW 257
+W
Sbjct: 737 LW 738
Score = 55 (24.4 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 8/18 (44%), Positives = 15/18 (83%)
Query: 175 NGKFILVGTLDNTLRLWN 192
+G+ + G++DNT+RLW+
Sbjct: 722 DGEILASGSMDNTVRLWD 739
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 182 (69.1 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 66/274 (24%), Positives = 118/274 (43%)
Query: 1 MSSDRSLESFRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTY--SLSSISNF 58
M S + S +P L GH AV V+FS G L+ S S +KT+ + S+ S
Sbjct: 40 MDSCLKIWSMKPQMRAYCLVGHKDAVMCVQFSPSGHLVASGSRDKTVCLWVPSVKGESTV 99
Query: 59 DSTPPSPLQK--FTGHEQGI---SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSN 113
+ ++ F+ Q + SD TI++W V L +L H N+V C F+P
Sbjct: 100 FKAHTATVRSVHFSSDGQSLVTASDDKTIKVWTVHRQKFLFSLSQHINWVRCARFSPDGR 159
Query: 114 RIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDAST 173
I S + ++T+++WD + +C+ H ++F+ GT I + D ++ D
Sbjct: 160 LIASASDDKTVKLWDKTSRECIHSFCEHGGFANHVEFHPSGTCIAAAGTDKTVKVWDVR- 218
Query: 174 PNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCIS----STFSVTN---GKYIVS 226
++ L+ + T + + S + + Y I+ ST + + G+ + +
Sbjct: 219 ----------MNRLLQHYQVHTAAV-NSLSFHPSGNYLITASNDSTLKILDLLEGRLLYT 267
Query: 227 ---HRDPVISVASHPAKNIIASGALDNDRTMKIW 257
H+ P VA + ASG +D + +W
Sbjct: 268 LHGHQGPATCVAFSRTGDFFASGG--SDEQVMVW 299
Score = 124 (48.7 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 43/170 (25%), Positives = 79/170 (46%)
Query: 14 TLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS-------ISNFDSTPPSPL 66
+L + GH A++ V FS + + L S S + L +S+ + + D+
Sbjct: 11 SLERHFRGHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCVQF 70
Query: 67 QKFTGH--EQGISDLATIRLWDVPTATSLKTLI-GHTNYVFCINFNPQSNRIVSDTFNET 123
+GH G D T+ LW VP+ T+ HT V ++F+ +V+ + ++T
Sbjct: 71 SP-SGHLVASGSRD-KTVCLW-VPSVKGESTVFKAHTATVRSVHFSSDGQSLVTASDDKT 127
Query: 124 IRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDAST 173
I++W + K L L H + V F+ DG +I ++S D ++ D ++
Sbjct: 128 IKVWTVHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTS 177
>UNIPROTKB|F1NII4 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 PRINTS:PR00319 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:AADN02025808 EMBL:AADN02025807
IPI:IPI00592422 ProteinModelPortal:F1NII4
Ensembl:ENSGALT00000007475 Uniprot:F1NII4
Length = 498
Score = 167 (63.8 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 48/166 (28%), Positives = 79/166 (47%)
Query: 16 TQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSIS-NFDSTPPSPLQKFTGHEQ 74
T +L GH AV V FS G+ L S S + T+ + LS+ + F +
Sbjct: 120 TSSLEGHTEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPQFTAKGHRHWVLSIAWSP 179
Query: 75 GISDLAT------IRLWDVPTATSL-KTLIGHTNYVFCI-----NFNPQSNRIVSDTFNE 122
LA+ I LWD T + + L GH+ ++ C+ + NP+ + S + +
Sbjct: 180 DGKKLASGCKNSQIFLWDPATGNQIGRVLTGHSKWITCLCWEPLHINPECRYLASASKDG 239
Query: 123 TIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRI 168
+IRIWD G+C K+L H+ VT + + DG ++ +SS D ++
Sbjct: 240 SIRIWDTLMGRCDKILTGHTQSVTCVKWGGDG-LLYSSSQDRTIKV 284
Score = 167 (63.8 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 56/208 (26%), Positives = 96/208 (46%)
Query: 2 SSDRSLESFRPYT--LTQTLNGHLRAVSYVKFSHDGRLLTSS--SAEKTLLTYSLS-SIS 56
S DR+++ +R L +TL GH V+ + S D L T + AE T+ +S S++
Sbjct: 277 SQDRTIKVWRSQDGILCRTLQGHAHWVNTMALSTDYVLRTGAFEPAEATINPQDMSGSLA 336
Query: 57 NFDSTPPSPLQKFTGH--EQGIS--DLATIRLW-DVPTATSLKTLIGHTNYVFCINFNPQ 111
K G E+ +S D T+ LW L+ + GH + + F+P
Sbjct: 337 ELKDKAQQRYDKVRGQGPERLVSGSDDFTLFLWRPAEDKKPLERMTGHQALINQVLFSPD 396
Query: 112 SNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDA 171
+ I S +F+++I++W+ +TGK L L H V I ++ D ++V+ S D ++ DA
Sbjct: 397 TRIIASASFDKSIKLWEGRTGKYLTSLRGHVSAVYQIAWSADSRLLVSGSSDSTLKVWDA 456
Query: 172 STPNGKFILVGTLDNTLRL-WNYSTRKI 198
T L G D W+ +++
Sbjct: 457 ETKKLAIDLPGHADEVFATDWSPDGQRV 484
Score = 145 (56.1 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 30/88 (34%), Positives = 50/88 (56%)
Query: 81 TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPA 140
+I+LW+ T L +L GH + V+ I ++ S +VS + + T+++WD +T K LP
Sbjct: 408 SIKLWEGRTGKYLTSLRGHVSAVYQIAWSADSRLLVSGSSDSTLKVWDAETKKLAIDLPG 467
Query: 141 HSDPVTAIDFNRDGTMIVTSSYDGLYRI 168
H+D V A D++ DG + + D RI
Sbjct: 468 HADEVFATDWSPDGQRVASGGKDKCLRI 495
Score = 59 (25.8 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 11/41 (26%), Positives = 23/41 (56%)
Query: 173 TPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCIS 213
+P+ + I + D +++LW T K L + G+ ++ Y I+
Sbjct: 394 SPDTRIIASASFDKSIKLWEGRTGKYLTSLRGHVSAVYQIA 434
Score = 58 (25.5 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 11/46 (23%), Positives = 28/46 (60%)
Query: 165 LYRILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKY 210
+Y+I A + + + ++ G+ D+TL++W+ T+K+ G+ + +
Sbjct: 430 VYQI--AWSADSRLLVSGSSDSTLKVWDAETKKLAIDLPGHADEVF 473
Score = 57 (25.1 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 221 GKYIVS---HRDPVISVASHPAKNIIASGALDNDRTMKIWTQE 260
GKY+ S H V +A ++ SG+ +D T+K+W E
Sbjct: 417 GKYLTSLRGHVSAVYQIAWSADSRLLVSGS--SDSTLKVWDAE 457
Score = 42 (19.8 bits), Expect = 8.6e-11, Sum P(2) = 8.6e-11
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 173 TPNGKFILVGTLDNTLRLW 191
+P+G+ + G D LR+W
Sbjct: 478 SPDGQRVASGGKDKCLRIW 496
>UNIPROTKB|G4MQX3 [details] [associations]
symbol:MGG_04719 "Guanine nucleotide-binding protein
subunit beta-like protein" species:242507 "Magnaporthe oryzae
70-15" [GO:0005575 "cellular_component" evidence=ND] [GO:0043581
"mycelium development" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001231 GO:GO:0043581 KO:K14753
RefSeq:XP_003710816.1 ProteinModelPortal:G4MQX3 SMR:G4MQX3
EnsemblFungi:MGG_04719T0 GeneID:2677887 KEGG:mgr:MGG_04719
Uniprot:G4MQX3
Length = 316
Score = 171 (65.3 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 52/180 (28%), Positives = 91/180 (50%)
Query: 15 LTQTLNGHLRAVSYVKFSHDG-RLLTSSSAEKTLLTYSLSSISNFDSTPPS-PLQKFTGH 72
L TL GH V+ + S + +L SSS +KTL+ ++L+ D T P + GH
Sbjct: 7 LKGTLEGHNGWVTSLATSMENPNMLLSSSRDKTLIIWNLTR----DETSYGYPKRSLKGH 62
Query: 73 EQGISDLA---------------TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVS 117
+SD T+RLW++ T T+ + +GHTN V ++F+ + +IVS
Sbjct: 63 SHIVSDCVISSDGAYALSASWDKTLRLWELATGTTTRRFVGHTNDVLSVSFSADNRQIVS 122
Query: 118 DTFNETIRIWDIKTGKCLKVLP--AHSDPVTAIDF--NRDGTMIVTSSYDGLYRILDAST 173
+ + +I++W+ G C + HS+ V+ + F N +IV+S +D L ++ + S+
Sbjct: 123 GSRDRSIKLWNT-LGDCKYTITEKGHSEWVSCVRFSPNPQNPVIVSSGWDKLVKVWELSS 181
Score = 133 (51.9 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 44/166 (26%), Positives = 77/166 (46%)
Query: 17 QTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS---ISNFDSTPPSPLQ-KFTGH 72
++L GH VS S DG S+S +KTL + L++ F L F+
Sbjct: 57 RSLKGHSHIVSDCVISSDGAYALSASWDKTLRLWELATGTTTRRFVGHTNDVLSVSFSAD 116
Query: 73 EQGI---SDLATIRLWDVPTATSLKTLI---GHTNYVFCINF--NPQSNRIVSDTFNETI 124
+ I S +I+LW+ T K I GH+ +V C+ F NPQ+ IVS +++ +
Sbjct: 117 NRQIVSGSRDRSIKLWN--TLGDCKYTITEKGHSEWVSCVRFSPNPQNPVIVSSGWDKLV 174
Query: 125 RIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
++W++ + K H+ + + + DG++ + DG + D
Sbjct: 175 KVWELSSCKLQTDHIGHTGYINTVTISPDGSLCASGGKDGTTMLWD 220
Score = 106 (42.4 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 37/160 (23%), Positives = 70/160 (43%)
Query: 14 TLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQ-----K 68
T T+ GH V V FS D R + S S ++++ ++ + T + +
Sbjct: 96 TTTRRFVGHTNDVLSVSFSADNRQIVSGSRDRSIKLWNTLGDCKYTITEKGHSEWVSCVR 155
Query: 69 FTGHEQGISDLAT-----IRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNET 123
F+ + Q +++ +++W++ + IGHT Y+ + +P + S + T
Sbjct: 156 FSPNPQNPVIVSSGWDKLVKVWELSSCKLQTDHIGHTGYINTVTISPDGSLCASGGKDGT 215
Query: 124 IRIWDIKTGKCLKVLPAHSDPVTAIDF--NRDGTMIVTSS 161
+WD+ K L L A+ D + A+ F NR T+S
Sbjct: 216 TMLWDLNESKHLYSLNAN-DEIHALVFSPNRYWLCAATAS 254
Score = 44 (20.5 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 171 ASTPNGKFILVGTLDNTLRLWNYSTR 196
A + +G+ + G DN +R W +R
Sbjct: 290 AWSADGQTLFAGYTDNIIRAWGVMSR 315
Score = 43 (20.2 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 173 TPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSK 209
+P+G G D T LW+ + K L YS N +
Sbjct: 201 SPDGSLCASGGKDGTTMLWDLNESKHL--YSLNANDE 235
>FB|FBgn0010356 [details] [associations]
symbol:Taf5 "TBP-associated factor 5" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0005669 "transcription factor TFIID complex"
evidence=ISS;IDA;IPI] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0000124 "SAGA complex"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0000124 GO:GO:0005669 GO:GO:0051123
GeneTree:ENSGT00700000104377 KO:K03130 EMBL:U06460 EMBL:AY051960
PIR:S33263 RefSeq:NP_476957.1 UniGene:Dm.19905
ProteinModelPortal:P49846 SMR:P49846 DIP:DIP-48906N STRING:P49846
PaxDb:P49846 PRIDE:P49846 EnsemblMetazoa:FBtr0088240 GeneID:47900
KEGG:dme:Dmel_CG7704 CTD:6877 FlyBase:FBgn0010356 InParanoid:P49846
OMA:ERQNNQI OrthoDB:EOG4F7M11 PhylomeDB:P49846 GenomeRNAi:47900
NextBio:839215 Bgee:P49846 GermOnline:CG7704 Uniprot:P49846
Length = 704
Score = 186 (70.5 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 67/247 (27%), Positives = 115/247 (46%)
Query: 5 RSLESFRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSL---SSISNFDS- 60
R L+ R +T++L GH V F+ + LL S S + T+ +SL S + +
Sbjct: 433 RMLDD-RSGEVTRSLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVVTYRGH 491
Query: 61 TPPSPLQKFTGHEQGISDLA---TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVS 117
P +F H + T RLW + +L+ +GH + V C+ F+P SN + +
Sbjct: 492 VYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHPNSNYVAT 551
Query: 118 DTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGK 177
+ + T+R+WD TG+ ++++ H V+++ F+ G + + S D I D S NG
Sbjct: 552 GSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNIIIWDLS--NGS 609
Query: 178 FILVGTL---DNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISV 234
LV TL +T+ +S + +G N+ + VT YI +H I+V
Sbjct: 610 --LVTTLLRHTSTVTTITFSRDGTVLAAAGLDNN-LTLWDFHKVTED-YISNH----ITV 661
Query: 235 ASHPAKN 241
+ H +N
Sbjct: 662 SHHQDEN 668
Score = 163 (62.4 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 59/257 (22%), Positives = 116/257 (45%)
Query: 1 MSSDRSLESFRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDS 60
+S D+ L S YT+ LN H + V+ + S D +L + ++ +SL+
Sbjct: 360 LSKDQ-LPSAVFYTV---LNSH-QGVTCAEISDDSTMLACGFGDSSVRIWSLTPAKLRTL 414
Query: 61 TPPSPLQKFTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTF 120
L++ ++ +D+ +R+ D + ++L+GHT V+ F P+ N ++S +
Sbjct: 415 KDADSLREL---DKESADI-NVRMLDDRSGEVTRSLMGHTGPVYRCAFAPEMNLLLSCSE 470
Query: 121 NETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFIL 180
+ TIR+W + T C+ H PV + F G V+ SYD R+ + +
Sbjct: 471 DSTIRLWSLLTWSCVVTYRGHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVF 530
Query: 181 VGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAK 240
VG L + + + + T G ++ + + + + + H+ V S+A
Sbjct: 531 VGHLSDVDCVQFHPNSNYVAT--GSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSACG 588
Query: 241 NIIASGALDNDRTMKIW 257
+ASG++D++ + IW
Sbjct: 589 RYLASGSVDHN--IIIW 603
Score = 155 (59.6 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 46/188 (24%), Positives = 84/188 (44%)
Query: 77 SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLK 136
S+ +TIRLW + T + + T GH V+ + F P VS ++++T R+W + + L+
Sbjct: 469 SEDSTIRLWSLLTWSCVVTYRGHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALR 528
Query: 137 VLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYSTR 196
V H V + F+ + + T S D R+ D T ++ G + L +
Sbjct: 529 VFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSACG 588
Query: 197 KILKTYSGYTNSKYCISSTFSVTNGKYIVS---HRDPVISVASHPAKNIIASGALDNDRT 253
+ L SG + I + ++NG + + H V ++ ++A+ LDN+ T
Sbjct: 589 RYLA--SGSVDHNIII---WDLSNGSLVTTLLRHTSTVTTITFSRDGTVLAAAGLDNNLT 643
Query: 254 MKIWTQEK 261
+ W K
Sbjct: 644 L--WDFHK 649
>UNIPROTKB|G4N183 [details] [associations]
symbol:MGG_07465 "Periodic tryptophan protein 2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CM001233 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR011047 SUPFAM:SSF50998 KO:K14558 InterPro:IPR027145
InterPro:IPR007148 PANTHER:PTHR19858 Pfam:PF04003
RefSeq:XP_003711369.1 ProteinModelPortal:G4N183
EnsemblFungi:MGG_07465T0 GeneID:2683385 KEGG:mgr:MGG_07465
Uniprot:G4N183
Length = 900
Score = 158 (60.7 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 50/191 (26%), Positives = 92/191 (48%)
Query: 75 GISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKC 134
G S L + +W+ + + + GH + + + ++P RIV+ + +++WDI++G C
Sbjct: 318 GASKLGQLLVWEWQSESYILKQQGHFDSMNALAYSPDGKRIVTAADDGKLKVWDIESGFC 377
Query: 135 LKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYS 194
+ H+ VTA F + G ++ T+S DG R D ++ T RL ++S
Sbjct: 378 IVTFTEHTSGVTACQFAKKGNVLFTASLDGSIRAWDLI----RYRNFRTFTAPTRL-SFS 432
Query: 195 TRKILKTYSGYTNSKYCISS----TFSVTNGKYI--VS-HRDPVISVASHPAKNIIASGA 247
+ SG + + S +SV G+ + +S H PV +VA P ++ SG+
Sbjct: 433 CMAV--DPSGEVVAAGSLDSFDVHIWSVQTGQLLDQLSGHEGPVSAVAFAPDGGLLVSGS 490
Query: 248 LDNDRTMKIWT 258
D +T +IW+
Sbjct: 491 WD--KTARIWS 499
Score = 121 (47.7 bits), Expect = 0.00024, P = 0.00024
Identities = 39/157 (24%), Positives = 69/157 (43%)
Query: 18 TLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDS-TPPSPLQKF------T 70
T H V+ +F+ G +L ++S + ++ + L NF + T P+ L +
Sbjct: 380 TFTEHTSGVTACQFAKKGNVLFTASLDGSIRAWDLIRYRNFRTFTAPTRLSFSCMAVDPS 439
Query: 71 GH--EQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWD 128
G G D + +W V T L L GH V + F P +VS ++++T RIW
Sbjct: 440 GEVVAAGSLDSFDVHIWSVQTGQLLDQLSGHEGPVSAVAFAPDGGLLVSGSWDKTARIWS 499
Query: 129 I-KTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDG 164
+ + + L +D V ++ D + + S+ DG
Sbjct: 500 VFNRTQTSEPLQLQAD-VLSVAVRPDSSQLAVSTLDG 535
Score = 76 (31.8 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 22/75 (29%), Positives = 36/75 (48%)
Query: 2 SSDRSLESFRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDST 61
+ D LE F P+ + H V ++++S D R S+S + T +SL+ F
Sbjct: 132 TGDDGLE-FAPFVRHHSHAAHFDEVRHIEWSRDSRFFLSASKDLTARIWSLNQEEGFT-- 188
Query: 62 PPSPLQKFTGHEQGI 76
P+ L +GH QG+
Sbjct: 189 -PTVL---SGHRQGV 199
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 181 (68.8 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 45/166 (27%), Positives = 86/166 (51%)
Query: 18 TLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYS---------LSSISNF-DSTPPS--- 64
TL GH AV + ++ DG +L S+S +KT+ + L ++F +S P+
Sbjct: 105 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRG 164
Query: 65 PLQKFTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETI 124
P TG + G T++LWD+ +++T +T V + FN S++I+S + I
Sbjct: 165 PQLVCTGSDDG-----TVKLWDIRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGGIDNDI 218
Query: 125 RIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
++WD++ K + H+D VT + + +G+ +++++ D R+ D
Sbjct: 219 KVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWD 264
Score = 127 (49.8 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 47/185 (25%), Positives = 86/185 (46%)
Query: 82 IRLWDV-PTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPA 140
I LW V + TL GH+ V +++N + + S + ++T+ +WD +TG+ +K L
Sbjct: 91 ILLWSVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKG 150
Query: 141 HSDPVTAIDFNRDGTMIV-TSSYDGLYRILDASTPNGKFILVGTLDNTLRL----WNYST 195
H+ V + R G +V T S DG ++ D K + T NT ++ +N ++
Sbjct: 151 HTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIR----KKAAIQTFQNTYQVLAVTFNDTS 206
Query: 196 RKILKTYSGYTNSKYCISSTFSVTNGK--YIV-SHRDPVISVASHPAKNIIASGALDNDR 252
+I+ G N + + K Y + H D V ++ + + S A+DN
Sbjct: 207 DQIIS--GGIDND----IKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDN-- 258
Query: 253 TMKIW 257
T+++W
Sbjct: 259 TVRVW 263
Score = 120 (47.3 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 28/92 (30%), Positives = 45/92 (48%)
Query: 88 PTATSLKT----LIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKC--LKVLPAH 141
P +SL+ L GH V+C F+P + + S F+ I +W + G C L H
Sbjct: 51 PRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWSVY-GDCDNYATLKGH 109
Query: 142 SDPVTAIDFNRDGTMIVTSSYDGLYRILDAST 173
S V + +N DG+M+ ++S D + D+ T
Sbjct: 110 SGAVMELHYNTDGSMLFSASTDKTVAVWDSET 141
Score = 114 (45.2 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 39/181 (21%), Positives = 77/181 (42%)
Query: 19 LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSL-SSISNFDSTP--PSPLQKFTGHEQG 75
L+GH V KF +G L S+ ++ +L +S+ N+ + + + + G
Sbjct: 63 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWSVYGDCDNYATLKGHSGAVMELHYNTDG 122
Query: 76 -----ISDLATIRLWDVPTATSLKTLIGHTNYV-FCINFNPQSNRIVSDTFNETIRIWDI 129
S T+ +WD T +K L GHT++V C + + + + T+++WDI
Sbjct: 123 SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDI 182
Query: 130 KTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLR 189
+ ++ ++ V A+ FN I++ D ++ D + + G D+
Sbjct: 183 RKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTG 241
Query: 190 L 190
L
Sbjct: 242 L 242
Score = 51 (23.0 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 7/17 (41%), Positives = 13/17 (76%)
Query: 176 GKFILVGTLDNTLRLWN 192
G ++L +DNT+R+W+
Sbjct: 248 GSYLLSNAMDNTVRVWD 264
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 179 (68.1 bits), Expect = 7.6e-12, P = 7.6e-12
Identities = 38/103 (36%), Positives = 59/103 (57%)
Query: 71 GHEQGI-----SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIR 125
GH QG S TIR+WDV L TL GH N+V + F+P +VS + ++TIR
Sbjct: 305 GHHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIR 364
Query: 126 IWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRI 168
+WD++ +C+K L AH T+IDF++ +++ S D ++
Sbjct: 365 VWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKV 407
Score = 168 (64.2 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 56/228 (24%), Positives = 98/228 (42%)
Query: 17 QTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGHEQGI 76
++L GH +V V F G+LL S SA+ ++ + +++ ++ GH+ +
Sbjct: 144 RSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQ--SYEC-----IKTMHGHDHNV 196
Query: 77 SDLA---------------TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFN 121
S +A TI++W+V T +KT GH +V + + + + + + +
Sbjct: 197 SSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSND 256
Query: 122 ETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILV 181
+TIR+W + C L H V I + + + G G F+
Sbjct: 257 QTIRVWLTNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAGADN--KKGHHQGPFLAS 314
Query: 182 GTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRD 229
G+ D T+R+W+ S L T SG+ N + F GKY+VS D
Sbjct: 315 GSRDKTIRIWDVSVGLCLLTLSGHDN--WVRGLAFH-PGGKYLVSASD 359
Score = 141 (54.7 bits), Expect = 9.8e-09, Sum P(2) = 9.8e-09
Identities = 40/161 (24%), Positives = 79/161 (49%)
Query: 18 TLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDST---PPSPLQKFTGHEQ 74
+L GH +++ V F L+ S+S + T+ + + ++ + +Q Q
Sbjct: 103 SLTGHRASITRVIFHPIFALMVSASEDATIRIWDFET-GEYERSLKGHTDSVQDVAFDAQ 161
Query: 75 G------ISDLATIRLWDVPTATS-LKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIW 127
G +DL+ I+LWD + +KT+ GH + V + F P + ++S + + TI++W
Sbjct: 162 GKLLASCSADLS-IKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMW 220
Query: 128 DIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRI 168
++ TG C+K H + V + + +G++ T S D R+
Sbjct: 221 EVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRV 261
Score = 125 (49.1 bits), Expect = 8.8e-07, Sum P(2) = 8.8e-07
Identities = 58/239 (24%), Positives = 108/239 (45%)
Query: 2 SSDRSLESF---RPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS---I 55
S+D S++ + + Y +T++GH VS V F G + S+S ++T+ + +++ +
Sbjct: 169 SADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCV 228
Query: 56 SNFDSTPPSPLQKFTGHEQG-----ISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNP 110
+ ++ H +G S+ TIR+W + L H + V CI + P
Sbjct: 229 KTYTGHREW-VRMVRVHIEGSIFATCSNDQTIRVWLTNSKDCKVELRDHEHTVECIAWAP 287
Query: 111 QSNRIVSDTFNETIRIWDIKTGKCL-KVLPAHS-DPVTAI-DFNRDGTMIVTSSYDGLYR 167
++ + NE D K G L + S D I D + ++ S +D R
Sbjct: 288 EA---AASAINEAAGA-DNKKGHHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVR 343
Query: 168 ILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVS 226
L A P GK+++ + D T+R+W+ ++ +KT Y + +C S F + Y++S
Sbjct: 344 GL-AFHPGGKYLVSASDDKTIRVWDLRNKRCMKTL--YAHQHFCTSIDFHKAH-PYVIS 398
Score = 125 (49.1 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 44/181 (24%), Positives = 82/181 (45%)
Query: 85 WDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDP 144
W +P +L GH + + F+P +VS + + TIRIWD +TG+ + L H+D
Sbjct: 94 W-IPRPPEKFSLTGHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDS 152
Query: 145 VTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNY--STRKILKTY 202
V + F+ G ++ + S D ++ D + D+ + + + +L
Sbjct: 153 VQDVAFDAQGKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSAS 212
Query: 203 SGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDNDRTMKIW-TQEK 261
T + +++ + V K HR+ V V H +I A+ ND+T+++W T K
Sbjct: 213 RDRTIKMWEVATGYCV---KTYTGHREWVRMVRVHIEGSIFAT--CSNDQTIRVWLTNSK 267
Query: 262 E 262
+
Sbjct: 268 D 268
Score = 52 (23.4 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 11/36 (30%), Positives = 21/36 (58%)
Query: 222 KYIVSHRDPVISVASHPAKNIIASGALDNDRTMKIW 257
K + +H+ S+ H A + SG++D +T+K+W
Sbjct: 375 KTLYAHQHFCTSIDFHKAHPYVISGSVD--QTVKVW 408
Score = 40 (19.1 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 4/14 (28%), Positives = 12/14 (85%)
Query: 178 FILVGTLDNTLRLW 191
+++ G++D T+++W
Sbjct: 395 YVISGSVDQTVKVW 408
>UNIPROTKB|E1BT84 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 OMA:TVMEVKL EMBL:AADN02024425
IPI:IPI00586005 ProteinModelPortal:E1BT84
Ensembl:ENSGALT00000003177 Uniprot:E1BT84
Length = 1323
Score = 187 (70.9 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 53/189 (28%), Positives = 88/189 (46%)
Query: 77 SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFN--ETIRIWDIKTGKC 134
SD T+R+WD + L GH V C++++P +VS + + + I+ WD KTG+
Sbjct: 221 SDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQS 280
Query: 135 LKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKF-ILVG-TLDNTLRLWN 192
L L AH + V + N +G ++T+S D L ++ D + + G + T W
Sbjct: 281 LATLHAHKNTVMEVKLNLNGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAW- 339
Query: 193 YSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDNDR 252
+ + L G S G ++H + S+A HP +I+ SG+ ND
Sbjct: 340 HPVHEGLFASGGSDGSLLFWHVGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGS--NDH 397
Query: 253 TMKIWTQEK 261
T K WT+ +
Sbjct: 398 TSKFWTRNR 406
>UNIPROTKB|F1LT09 [details] [associations]
symbol:Wdr33 "Protein Wdr33" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1309230 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 IPI:IPI00189285 PRIDE:F1LT09
Ensembl:ENSRNOT00000017075 ArrayExpress:F1LT09 Uniprot:F1LT09
Length = 1327
Score = 187 (70.9 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 53/189 (28%), Positives = 88/189 (46%)
Query: 77 SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFN--ETIRIWDIKTGKC 134
SD T+R+WD + L GH V C++++P +VS + + + I+ WD KTG+
Sbjct: 217 SDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQS 276
Query: 135 LKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKF-ILVG-TLDNTLRLWN 192
L L AH + V + N +G ++T+S D L ++ D + + G + T W
Sbjct: 277 LATLHAHKNTVMEVKLNLNGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAW- 335
Query: 193 YSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDNDR 252
+ + L G S G ++H + S+A HP +I+ SG+ ND
Sbjct: 336 HPVHEGLFASGGSDGSLLFWHVGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGS--NDH 393
Query: 253 TMKIWTQEK 261
T K WT+ +
Sbjct: 394 TSKFWTRNR 402
>MGI|MGI:1921570 [details] [associations]
symbol:Wdr33 "WD repeat domain 33" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005581
"collagen" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1921570 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0006397
GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391 HSSP:P16649
GeneTree:ENSGT00540000070914 KO:K15542 CTD:55339 OMA:TVMEVKL
ChiTaRS:WDR33 EMBL:AB086191 EMBL:AK031786 EMBL:AK050653
EMBL:AC124393 EMBL:AC131761 EMBL:AC161511 IPI:IPI00170242
RefSeq:NP_083142.2 UniGene:Mm.277705 ProteinModelPortal:Q8K4P0
SMR:Q8K4P0 PhosphoSite:Q8K4P0 PRIDE:Q8K4P0
Ensembl:ENSMUST00000025264 GeneID:74320 KEGG:mmu:74320
UCSC:uc008eis.2 HOGENOM:HOG000148601 HOVERGEN:HBG054623
InParanoid:Q8C7C6 NextBio:340445 Bgee:Q8K4P0 Genevestigator:Q8K4P0
Uniprot:Q8K4P0
Length = 1330
Score = 187 (70.9 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 53/189 (28%), Positives = 88/189 (46%)
Query: 77 SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFN--ETIRIWDIKTGKC 134
SD T+R+WD + L GH V C++++P +VS + + + I+ WD KTG+
Sbjct: 221 SDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQS 280
Query: 135 LKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKF-ILVG-TLDNTLRLWN 192
L L AH + V + N +G ++T+S D L ++ D + + G + T W
Sbjct: 281 LATLHAHKNTVMEVKLNLNGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAW- 339
Query: 193 YSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDNDR 252
+ + L G S G ++H + S+A HP +I+ SG+ ND
Sbjct: 340 HPVHEGLFASGGSDGSLLFWHVGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGS--NDH 397
Query: 253 TMKIWTQEK 261
T K WT+ +
Sbjct: 398 TSKFWTRNR 406
>UNIPROTKB|E1BCT7 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 KO:K15542 CTD:55339 OMA:TVMEVKL
EMBL:DAAA02003882 EMBL:DAAA02003883 EMBL:DAAA02003884
IPI:IPI00689135 RefSeq:NP_001193007.1 UniGene:Bt.32571
ProteinModelPortal:E1BCT7 Ensembl:ENSBTAT00000007859 GeneID:541270
KEGG:bta:541270 NextBio:20879105 Uniprot:E1BCT7
Length = 1336
Score = 187 (70.9 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 53/189 (28%), Positives = 88/189 (46%)
Query: 77 SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFN--ETIRIWDIKTGKC 134
SD T+R+WD + L GH V C++++P +VS + + + I+ WD KTG+
Sbjct: 221 SDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQS 280
Query: 135 LKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKF-ILVG-TLDNTLRLWN 192
L L AH + V + N +G ++T+S D L ++ D + + G + T W
Sbjct: 281 LATLHAHKNTVMEVKLNLNGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAW- 339
Query: 193 YSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDNDR 252
+ + L G S G ++H + S+A HP +I+ SG+ ND
Sbjct: 340 HPVHEGLFASGGSDGSLLFWHVGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGS--NDH 397
Query: 253 TMKIWTQEK 261
T K WT+ +
Sbjct: 398 TSKFWTRNR 406
>UNIPROTKB|F1PV59 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR008160
Pfam:PF01391 GeneTree:ENSGT00540000070914 KO:K15542 OMA:TVMEVKL
EMBL:AAEX03011835 RefSeq:XP_003639747.1 ProteinModelPortal:F1PV59
Ensembl:ENSCAFT00000006945 GeneID:100856093 KEGG:cfa:100856093
Uniprot:F1PV59
Length = 1336
Score = 187 (70.9 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 53/189 (28%), Positives = 88/189 (46%)
Query: 77 SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFN--ETIRIWDIKTGKC 134
SD T+R+WD + L GH V C++++P +VS + + + I+ WD KTG+
Sbjct: 221 SDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQS 280
Query: 135 LKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKF-ILVG-TLDNTLRLWN 192
L L AH + V + N +G ++T+S D L ++ D + + G + T W
Sbjct: 281 LATLHAHKNTVMEVKLNLNGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAW- 339
Query: 193 YSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDNDR 252
+ + L G S G ++H + S+A HP +I+ SG+ ND
Sbjct: 340 HPVHEGLFASGGSDGSLLFWHVGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGS--NDH 397
Query: 253 TMKIWTQEK 261
T K WT+ +
Sbjct: 398 TSKFWTRNR 406
>UNIPROTKB|Q9C0J8 [details] [associations]
symbol:WDR33 "pre-mRNA 3' end processing protein WDR33"
species:9606 "Homo sapiens" [GO:0005581 "collagen" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006301 "postreplication repair" evidence=NAS]
[GO:0007283 "spermatogenesis" evidence=NAS] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006397 GO:GO:0007283
EMBL:CH471103 GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391
GO:GO:0006301 KO:K15542 EMBL:AC006011 EMBL:AB044749 EMBL:AK002156
EMBL:AK223319 EMBL:BC005401 EMBL:BC013990 EMBL:BC068484
EMBL:AL834365 IPI:IPI00106567 IPI:IPI00385811 IPI:IPI00432450
RefSeq:NP_001006623.1 RefSeq:NP_001006624.1 RefSeq:NP_060853.3
UniGene:Hs.554831 ProteinModelPortal:Q9C0J8 SMR:Q9C0J8
IntAct:Q9C0J8 PhosphoSite:Q9C0J8 DMDM:209572695 PaxDb:Q9C0J8
PRIDE:Q9C0J8 Ensembl:ENST00000322313 Ensembl:ENST00000393006
Ensembl:ENST00000409658 GeneID:55339 KEGG:hsa:55339 UCSC:uc002tpg.2
UCSC:uc002tpi.2 CTD:55339 GeneCards:GC02M128458 HGNC:HGNC:25651
HPA:HPA026897 neXtProt:NX_Q9C0J8 PharmGKB:PA134943440
HOGENOM:HOG000126810 HOVERGEN:HBG062379 InParanoid:Q9C0J8
OMA:TVMEVKL OrthoDB:EOG4V6ZG7 PhylomeDB:Q9C0J8 ChiTaRS:WDR33
GenomeRNAi:55339 NextBio:59651 ArrayExpress:Q9C0J8 Bgee:Q9C0J8
CleanEx:HS_WDR33 Genevestigator:Q9C0J8 GermOnline:ENSG00000136709
Uniprot:Q9C0J8
Length = 1336
Score = 187 (70.9 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 53/189 (28%), Positives = 88/189 (46%)
Query: 77 SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFN--ETIRIWDIKTGKC 134
SD T+R+WD + L GH V C++++P +VS + + + I+ WD KTG+
Sbjct: 221 SDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQS 280
Query: 135 LKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKF-ILVG-TLDNTLRLWN 192
L L AH + V + N +G ++T+S D L ++ D + + G + T W
Sbjct: 281 LATLHAHKNTVMEVKLNLNGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAW- 339
Query: 193 YSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDNDR 252
+ + L G S G ++H + S+A HP +I+ SG+ ND
Sbjct: 340 HPVHEGLFASGGSDGSLLFWHVGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGS--NDH 397
Query: 253 TMKIWTQEK 261
T K WT+ +
Sbjct: 398 TSKFWTRNR 406
>POMBASE|SPCC16A11.02 [details] [associations]
symbol:utp13 "U3 snoRNP-associated protein Utp13
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC16A11.02 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP PIR:T41075 RefSeq:NP_587989.2
ProteinModelPortal:Q9USN3 STRING:Q9USN3 EnsemblFungi:SPCC16A11.02.1
GeneID:2539337 KEGG:spo:SPCC16A11.02 OrthoDB:EOG4DZ53K
NextBio:20800502 Uniprot:Q9USN3
Length = 777
Score = 185 (70.2 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 50/175 (28%), Positives = 88/175 (50%)
Query: 38 LTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGHEQGISDLA---------------TI 82
L SSS ++TL ++L S N + H++ ++ + TI
Sbjct: 430 LASSSQDRTLKRFNLGSQLNKSDFSNRAVWTIKAHDRDVNAIQVSKDGRIIASASQDKTI 489
Query: 83 RLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHS 142
+LWD T + L GH V+ +FNP S ++ S + + TIRIW++ T +C++ L H+
Sbjct: 490 KLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQLASGSGDRTIRIWNVDTQQCVQTLEGHT 549
Query: 143 DPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTL-RLWNYSTR 196
+ + + GT +V+++ DGL ++ S+ G+ V TLDN R+W ++R
Sbjct: 550 GAILKLIYISQGTQVVSAAADGLVKVWSLSS--GE--CVATLDNHEDRVWALASR 600
Score = 179 (68.1 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 46/166 (27%), Positives = 83/166 (50%)
Query: 18 TLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGHEQGI- 76
T+ H R V+ ++ S DGR++ S+S +KT I +DS+ + GH +G+
Sbjct: 460 TIKAHDRDVNAIQVSKDGRIIASASQDKT--------IKLWDSSTGEVVGVLRGHRRGVW 511
Query: 77 --------SDLA------TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNE 122
LA TIR+W+V T ++TL GHT + + + Q ++VS +
Sbjct: 512 ACSFNPFSRQLASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADG 571
Query: 123 TIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRI 168
+++W + +G+C+ L H D V A+ DG+++V+ D + +
Sbjct: 572 LVKVWSLSSGECVATLDNHEDRVWALASRFDGSLLVSGGADAVVSV 617
Score = 116 (45.9 bits), Expect = 0.00073, P = 0.00073
Identities = 58/251 (23%), Positives = 104/251 (41%)
Query: 19 LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGHEQGISD 78
L GH V + S DG L + + + T+ ++L N + + FTGH ++
Sbjct: 360 LEGHTDIVLTLDSSEDGVWLATGAKDNTVRLWNL----NIEDNVYKCIHVFTGHTASVTA 415
Query: 79 LATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKT-GKCLKV 137
+A L DV + + N Q N+ SD N + W IK + +
Sbjct: 416 VALGPL-DVNGYPTFLASSSQDRTLKRFNLGSQLNK--SDFSNRAV--WTIKAHDRDVNA 470
Query: 138 LPAHSDPVTAIDFNRDGTMIV----TSSYDGLYR-----ILDAS-TPNGKFILVGTLDNT 187
+ D ++D T+ + T G+ R + S P + + G+ D T
Sbjct: 471 IQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQLASGSGDRT 530
Query: 188 LRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHR-DPVISVASHPAKNIIASG 246
+R+WN T++ ++T G+T + I ++ G +VS D ++ V S + +A+
Sbjct: 531 IRIWNVDTQQCVQTLEGHTGA---ILKLIYISQGTQVVSAAADGLVKVWSLSSGECVAT- 586
Query: 247 ALDNDRTMKIW 257
LDN ++W
Sbjct: 587 -LDNHED-RVW 595
Score = 112 (44.5 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 51/206 (24%), Positives = 83/206 (40%)
Query: 60 STPPSPLQKFT-GHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSD 118
S+ L++F G + SD + +W T+ H V I + I S
Sbjct: 433 SSQDRTLKRFNLGSQLNKSDFSNRAVW---------TIKAHDRDVNAIQVSKDGRIIASA 483
Query: 119 TFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKF 178
+ ++TI++WD TG+ + VL H V A FN + + S D RI + T
Sbjct: 484 SQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQLASGSGDRTIRIWNVDTQQCVQ 543
Query: 179 ILVGTLDNTLRLWNYS--TRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVAS 236
L G L+L S T+ + G + +SS V + +H D V ++AS
Sbjct: 544 TLEGHTGAILKLIYISQGTQVVSAAADGLVKV-WSLSSGECVAT---LDNHEDRVWALAS 599
Query: 237 HPAKNIIASGALDNDRTMKIWTQEKE 262
+++ SG D + +W E
Sbjct: 600 RFDGSLLVSGGAD--AVVSVWKDVTE 623
Score = 47 (21.6 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 11/42 (26%), Positives = 19/42 (45%)
Query: 21 GHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTP 62
GH + + F G L S S +KT+ +++ S + P
Sbjct: 187 GHSSVIRGLTFEPTGSFLLSGSRDKTVQVWNIKKRSAVRTIP 228
>UNIPROTKB|Q6PBD6 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:BC059759 RefSeq:NP_988871.1 UniGene:Str.5901
ProteinModelPortal:Q6PBD6 Ensembl:ENSXETT00000020997 GeneID:394466
KEGG:xtr:394466 Xenbase:XB-GENE-5751496 InParanoid:Q6PBD6
Bgee:Q6PBD6 Uniprot:Q6PBD6
Length = 305
Score = 161 (61.7 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 45/163 (27%), Positives = 75/163 (46%)
Query: 15 LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS---ISNFDSTPPSPLQ-KFT 70
L TL GH V V S G ++ SSS + + + L S I D+ P F+
Sbjct: 56 LQSTLEGHQLGVVSVDVSPSGNIMASSSLDAHIRLWDLESGKQIRAIDAGPVDAWSVAFS 115
Query: 71 GHEQGI---SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIW 127
Q + S + + ++ V T +L ++ I ++P + S + I I+
Sbjct: 116 PDSQHLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIF 175
Query: 128 DIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
DI TGK L L H+ P+ ++ F+ D ++VT+S DG +I +
Sbjct: 176 DIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYE 218
Score = 146 (56.5 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 34/149 (22%), Positives = 75/149 (50%)
Query: 29 VKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTP--PSPLQK--FTGHEQGI---SDLAT 81
+ +S DG+ L S + + + + +++ + P++ F+ Q + SD
Sbjct: 154 IAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGY 213
Query: 82 IRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAH 141
I++++V A+ TL GH ++V + F+P VS + ++++++WD+ C+ H
Sbjct: 214 IKIYEVQHASLAATLSGHGSWVLNVAFSPDDTHFVSSSSDKSVKVWDVSARTCVHTFLDH 273
Query: 142 SDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
D V + +N++G+ IV+ + D + D
Sbjct: 274 QDQVWGVKYNKNGSKIVSVADDQEIHVYD 302
Score = 124 (48.7 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 44/186 (23%), Positives = 81/186 (43%)
Query: 76 ISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCL 135
+ DL + W TL GH V ++ +P N + S + + IR+WD+++GK +
Sbjct: 40 LDDLVKVWKWSDERLELQSTLEGHQLGVVSVDVSPSGNIMASSSLDAHIRLWDLESGKQI 99
Query: 136 KVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYST 195
+ + A ++ F+ D + T S+ G I T ++ L T + YS
Sbjct: 100 RAIDAGPVDAWSVAFSPDSQHLATGSHVGKVNIFGVETGKKEYSL-DTRGKFILSIAYSP 158
Query: 196 R-KILKTYSGYTNSKYCISSTFSVTNGKYIVS---HRDPVISVASHPAKNIIASGALDND 251
K L SG + I + F + GK + + H P+ S+ P ++ + + +D
Sbjct: 159 DGKYLA--SGAIDG---IINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTAS--DD 211
Query: 252 RTMKIW 257
+KI+
Sbjct: 212 GYIKIY 217
Score = 121 (47.7 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 46/168 (27%), Positives = 73/168 (43%)
Query: 32 SHDGRLLTSSSAEKTLLTYSLSSISNFD-STPPSPLQKFTGHEQGISDLATIRLWDVPTA 90
SH G++ E YSL + F S SP K+ G D I ++D+ T
Sbjct: 125 SHVGKV-NIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLA--SGAID-GIINIFDIATG 180
Query: 91 TSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDF 150
L TL GH + + F+P S +V+ + + I+I++++ L H V + F
Sbjct: 181 KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYEVQHASLAATLSGHGSWVLNVAF 240
Query: 151 NRDGTMIVTSSYDGLYRILDASTPNGKFILVGT-LDNTLRLWNYSTRK 197
+ D T V+SS D ++ D S V T LD+ ++W K
Sbjct: 241 SPDDTHFVSSSSDKSVKVWDVSART----CVHTFLDHQDQVWGVKYNK 284
Score = 54 (24.1 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 16/75 (21%), Positives = 35/75 (46%)
Query: 155 TMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISS 214
++ T S G + + A +P+ + + D ++++W+ S R + T+ + + + +
Sbjct: 223 SLAATLSGHGSWVLNVAFSPDDTHFVSSSSDKSVKVWDVSARTCVHTFLDHQDQVWGVKY 282
Query: 215 TFSVTNGKYIVSHRD 229
NG IVS D
Sbjct: 283 N---KNGSKIVSVAD 294
>UNIPROTKB|I3LTD5 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 OMA:TVMEVKL EMBL:CU855997
EMBL:CU914448 Ensembl:ENSSSCT00000026043 Uniprot:I3LTD5
Length = 1471
Score = 187 (70.9 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 53/189 (28%), Positives = 88/189 (46%)
Query: 77 SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFN--ETIRIWDIKTGKC 134
SD T+R+WD + L GH V C++++P +VS + + + I+ WD KTG+
Sbjct: 222 SDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQS 281
Query: 135 LKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKF-ILVG-TLDNTLRLWN 192
L L AH + V + N +G ++T+S D L ++ D + + G + T W
Sbjct: 282 LATLHAHKNTVMEVKLNLNGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAW- 340
Query: 193 YSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDNDR 252
+ + L G S G ++H + S+A HP +I+ SG+ ND
Sbjct: 341 HPVHEGLFASGGSDGSLLFWHVGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGS--NDH 398
Query: 253 TMKIWTQEK 261
T K WT+ +
Sbjct: 399 TSKFWTRNR 407
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 162 (62.1 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 47/171 (27%), Positives = 85/171 (49%)
Query: 16 TQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSIS-NFD-----------STPP 63
T +L GH AV V FS G+ L S S + T+ + LS+ + +F S P
Sbjct: 109 TSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSP 168
Query: 64 SPLQKFTGHEQGISDLATIRLWDVPTATSL-KTLIGHTNYVFCINF-----NPQSNRIVS 117
+ +G + G I LWD T T + +TL GH+ ++ +++ NP+ + S
Sbjct: 169 DGKKLASGCKNG-----QILLWDPSTGTQVGRTLTGHSKWITGLSWEPLHMNPECRYVAS 223
Query: 118 DTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRI 168
+ + ++R+WD G+C ++L H+ VT + + DG ++ ++S D ++
Sbjct: 224 SSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDG-LLYSASQDRTIKV 273
Score = 160 (61.4 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 56/208 (26%), Positives = 95/208 (45%)
Query: 2 SSDRSLESFRPY--TLTQTLNGHLRAVSYVKFSHDGRLLTSS--SAEKTLLTYSLS-SIS 56
S DR+++ +R + L +TL GH V+ + S D L T + AE T+ L S+
Sbjct: 266 SQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEATVNAQDLQGSLK 325
Query: 57 NFDSTPPSP--LQKFTGHEQGIS--DLATIRLWD-VPTATSLKTLIGHTNYVFCINFNPQ 111
S L + G E+ +S D T+ LW L + GH + + F+P
Sbjct: 326 ELKERASSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPD 385
Query: 112 SNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDA 171
S + S +F+++I++WD +TGK L L H V I ++ D ++V+ S D ++ D
Sbjct: 386 SRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDV 445
Query: 172 STPNGKFILVGTLDNTLRL-WNYSTRKI 198
L G D + W+ +++
Sbjct: 446 KAQKLTTDLPGHADEVYAVDWSPDGQRV 473
Score = 155 (59.6 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 31/88 (35%), Positives = 50/88 (56%)
Query: 81 TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPA 140
+I+LWD T L +L GH V+ I ++ S +VS + + T+++WD+K K LP
Sbjct: 397 SIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLTTDLPG 456
Query: 141 HSDPVTAIDFNRDGTMIVTSSYDGLYRI 168
H+D V A+D++ DG + + D RI
Sbjct: 457 HADEVYAVDWSPDGQRVASGGKDKCLRI 484
Score = 142 (55.0 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 41/135 (30%), Positives = 63/135 (46%)
Query: 64 SPLQKFTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNET 123
SP K+ G D T+R WD+ T T T GH ++V I+++P ++ S N
Sbjct: 125 SPTGKYLA--SGSGD-TTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLASGCKNGQ 181
Query: 124 IRIWDIKTGKCL-KVLPAHSDPVTAIDF-----NRDGTMIVTSSYDGLYRILDASTPNGK 177
I +WD TG + + L HS +T + + N + + +SS DG R+ D + +
Sbjct: 182 ILLWDPSTGTQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWDTTAGRCE 241
Query: 178 FILVG-TLDNTLRLW 191
IL G T T W
Sbjct: 242 RILTGHTQSVTCLRW 256
Score = 97 (39.2 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 26/94 (27%), Positives = 43/94 (45%)
Query: 80 ATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLP 139
A R+ V TS +L GH+ V + F+P + S + + T+R WD+ T
Sbjct: 98 AVFRVRAVTRCTS--SLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCK 155
Query: 140 AHSDPVTAIDFNRDGTMIVTSSYDGLYRILDAST 173
H V +I ++ DG + + +G + D ST
Sbjct: 156 GHRHWVLSISWSPDGKKLASGCKNGQILLWDPST 189
Score = 62 (26.9 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 11/48 (22%), Positives = 28/48 (58%)
Query: 165 LYRILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCI 212
+Y+I A + + + ++ G+ D+TL++W+ +K+ G+ + Y +
Sbjct: 419 VYQI--AWSADSRLLVSGSSDSTLKVWDVKAQKLTTDLPGHADEVYAV 464
Score = 58 (25.5 bits), Expect = 8.7e-12, Sum P(2) = 8.7e-12
Identities = 10/41 (24%), Positives = 23/41 (56%)
Query: 173 TPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCIS 213
+P+ + + + D +++LW+ T K L + G+ + Y I+
Sbjct: 383 SPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIA 423
Score = 44 (20.5 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 163 DGLYRILDASTPNGKFILVGTLDNTLRLW 191
D +Y + D S P+G+ + G D LR+W
Sbjct: 459 DEVYAV-DWS-PDGQRVASGGKDKCLRIW 485
>DICTYBASE|DDB_G0269388 [details] [associations]
symbol:corB "coronin 7" species:44689 "Dictyostelium
discoideum" [GO:0051015 "actin filament binding" evidence=IEA;IDA]
[GO:0031589 "cell-substrate adhesion" evidence=IMP] [GO:0031276
"negative regulation of lateral pseudopodium assembly"
evidence=IMP] [GO:0031252 "cell leading edge" evidence=IDA]
[GO:0030866 "cortical actin cytoskeleton organization"
evidence=IMP] [GO:0030864 "cortical actin cytoskeleton"
evidence=IDA] [GO:0030835 "negative regulation of actin filament
depolymerization" evidence=IDA] [GO:0009617 "response to bacterium"
evidence=IMP] [GO:0006909 "phagocytosis" evidence=IEA;IMP]
[GO:0005829 "cytosol" evidence=IDA] [GO:0001891 "phagocytic cup"
evidence=IDA] [GO:0001667 "ameboidal cell migration" evidence=IMP]
[GO:0045335 "phagocytic vesicle" evidence=IBA] [GO:0042995 "cell
projection" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003779 "actin binding"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0269388 GO:GO:0005829 GO:GO:0031252
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0045335
GO:GO:0009617 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030866 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006909 GO:GO:0051015 GO:GO:0042995
GO:GO:0001891 GO:GO:0030864 GO:GO:0031589 GO:GO:0001667
GO:GO:0030835 InterPro:IPR015505 InterPro:IPR015048
InterPro:IPR015049 PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954
HSSP:O89053 OMA:EVEFARC RefSeq:XP_645927.1
ProteinModelPortal:Q55E54 EnsemblProtists:DDB0232260 GeneID:8616868
KEGG:ddi:DDB_G0269388 ProtClustDB:CLSZ2730920 GO:GO:0031276
Uniprot:Q55E54
Length = 962
Score = 153 (58.9 bits), Expect = 3.8e-12, Sum P(2) = 3.8e-12
Identities = 47/149 (31%), Positives = 83/149 (55%)
Query: 45 KTLLTYSLSS-ISNFDSTPPSPLQKFTGHEQGISDLATIRLWDVPTA-----TSLKT--L 96
+T L ++ SS + +F+ P + Q T SD +TI++W++ A TSL + +
Sbjct: 68 ETFLIHAHSSGVIDFEFNPFNEHQLVTA-----SDDSTIKVWNIDEAIRSGATSLSSASI 122
Query: 97 I--GHTNYVFCINFNPQSNRIVSD-TFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRD 153
+ GH+ V CI FNP +N I++ + ++T++IWD+ G+ +T++ +N D
Sbjct: 123 VCSGHSKSVECIAFNPVANNILASCSADKTLKIWDLSNGEEKYSWNFEQGSLTSLSWNYD 182
Query: 154 GTMIVTSSYDGLYRILDASTPNGKFILVG 182
G+++V + D RI+DA T G+ I VG
Sbjct: 183 GSLLVATGKDLKNRIIDART--GESIQVG 209
Score = 128 (50.1 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 28/90 (31%), Positives = 47/90 (52%)
Query: 91 TSLKTLIGHTNYVFCINFNPQS-NRIVSDTFNETIRIWDIK---TGKCLKVLPAHSDPVT 146
T+ +GH V +NF+P + N +++ + +++WD+ G+ L H+D +T
Sbjct: 607 TTEADFVGHNRKVISVNFHPTAENVLITSGGDMVVKLWDLNEGGAGEKLSFANVHTDMIT 666
Query: 147 AIDFNRDGTMIVTSSYDGLYRILDASTPNG 176
++D N G I+TSS D RI D T G
Sbjct: 667 SVDVNWTGDKILTSSKDKKMRIFDPRTNKG 696
Score = 81 (33.6 bits), Expect = 3.8e-12, Sum P(2) = 3.8e-12
Identities = 29/90 (32%), Positives = 45/90 (50%)
Query: 170 DASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRD 229
D S N + G+ D+ ++++ T I KT T +K S+ ++ T + V H
Sbjct: 566 DLSQHNTSLVATGSEDSHVKVFKIPTGGIPKT----TANK---SNNYTTTEADF-VGHNR 617
Query: 230 PVISVASHP-AKNI-IASGALDNDRTMKIW 257
VISV HP A+N+ I SG D +K+W
Sbjct: 618 KVISVNFHPTAENVLITSGG---DMVVKLW 644
Score = 55 (24.4 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 20 NGHLRAVSYVKFSH-DGRLLTSSSAEKTLLTYSLSS 54
+GH ++V + F+ +L S SA+KTL + LS+
Sbjct: 125 SGHSKSVECIAFNPVANNILASCSADKTLKIWDLSN 160
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 182 (69.1 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 46/171 (26%), Positives = 86/171 (50%)
Query: 2 SSDRSLESFRPYT--LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS---IS 56
S D+S++ + Y +L H V KFS DGRL+ S S +KT+ + ++ ++
Sbjct: 121 SEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVN 180
Query: 57 NF-DSTPPSPLQKFTGHEQGISDLA---TIRLWDVPTATSLKTLIGHTNYVFCINFNPQS 112
NF DS + F + I+ T+++WD+ L+ H+ V C++F+P
Sbjct: 181 NFSDSVGFANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSG 240
Query: 113 NRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYD 163
N I++ + + T++I D+ G+ + L H+ PV + F++ G + + D
Sbjct: 241 NYIITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFSSGGAD 291
Score = 177 (67.4 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 49/178 (27%), Positives = 83/178 (46%)
Query: 2 SSDRSLESFRPYTLTQT--LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS----I 55
S DR++ + P ++ H V V FS DG+ L ++S +K++ +++
Sbjct: 79 SRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWNMYRQRFLY 138
Query: 56 SNFDSTPPSPLQKFTGHEQGI---SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQS 112
S + T KF+ + I S+ TI++WD + + ++FNP
Sbjct: 139 SLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNG 198
Query: 113 NRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
I S + T++IWDI+ K L+ HS V + F+ G I+T+S DG +ILD
Sbjct: 199 TCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYIITASSDGTLKILD 256
Score = 162 (62.1 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 65/250 (26%), Positives = 109/250 (43%)
Query: 21 GHLRAVSYVKFSHDGRLLTSSSAEKTLLTY---SLSSISNFDS-TPPSPLQKFTGHEQGI 76
GH V+ V+FS G LL S+S ++T+ + S F + T P F+ Q +
Sbjct: 58 GHKDVVTSVQFSPLGNLLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFL 117
Query: 77 ---SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGK 133
S+ +I++W++ L +L HT++V C F+P IVS + ++TI+IWD +
Sbjct: 118 ATASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQ 177
Query: 134 CLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNY 193
C+ +DFN +GT I ++ D +I D I V L ++ +
Sbjct: 178 CVNNFSDSVGFANFVDFNPNGTCIASAGSDHTVKIWD--------IRVNKLLQHYQVHSG 229
Query: 194 STRKILKTYSG-Y--TNSKYCISSTFSVTNGKYIVS---HRDPVISVASHPAKNIIASGA 247
+ SG Y T S + G+ I + H PV +V+ + +SG
Sbjct: 230 GVNCVSFHPSGNYIITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFSSGG 289
Query: 248 LDNDRTMKIW 257
D + +W
Sbjct: 290 ADTQ--VLLW 297
Score = 131 (51.2 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 52/187 (27%), Positives = 89/187 (47%)
Query: 82 IRLWDV-PTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIW-DIKTGKCLKVLP 139
+ LW+ P A + + +GH + V + F+P N + S + + T+R+W K GK +
Sbjct: 42 LMLWNCKPQARAFR-YVGHKDVVTSVQFSPLGNLLASASRDRTVRLWIPDKRGKSSE-FK 99
Query: 140 AHSDPVTAIDFNRDGTMIVTSSYD------GLYR--ILDASTPNGKFILVGTLDNTLRLW 191
AH+ PV ++DF+ DG + T+S D +YR L + + ++ RL
Sbjct: 100 AHTAPVRSVDFSADGQFLATASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLI 159
Query: 192 -NYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDN 250
+ S K +K + T +K C+++ FS + G + D +P IAS +
Sbjct: 160 VSCSEDKTIKIWD--TTNKQCVNN-FSDSVG--FANFVD------FNPNGTCIASAG--S 206
Query: 251 DRTMKIW 257
D T+KIW
Sbjct: 207 DHTVKIW 213
Score = 117 (46.2 bits), Expect = 0.00029, P = 0.00029
Identities = 59/256 (23%), Positives = 109/256 (42%)
Query: 15 LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS-------ISNFD---STPPS 64
L + GH A++ V FS G+ L ++S + L+ ++ + + D S S
Sbjct: 10 LERYFKGHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYVGHKDVVTSVQFS 69
Query: 65 PLQKFTGHEQGISDLATIRLWDVPTATSLKTLI-GHTNYVFCINFNPQSNRIVSDTFNET 123
PL S T+RLW +P + HT V ++F+ + + + +++
Sbjct: 70 PLGNLLA---SASRDRTVRLW-IPDKRGKSSEFKAHTAPVRSVDFSADGQFLATASEDKS 125
Query: 124 IRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGT 183
I++W++ + L L H+ V F+ DG +IV+ S D +I D T N + V
Sbjct: 126 IKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWD--TTNKQ--CVNN 181
Query: 184 LDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVS---HRDPVISVASHPAK 240
+++ N+ T S + + + + K + H V V+ HP+
Sbjct: 182 FSDSVGFANFVDFNPNGTCIASAGSDHTVK-IWDIRVNKLLQHYQVHSGGVNCVSFHPSG 240
Query: 241 NIIASGALDNDRTMKI 256
N I + + +D T+KI
Sbjct: 241 NYIITAS--SDGTLKI 254
>UNIPROTKB|B4DF38 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016787 GO:GO:0005874 HOGENOM:HOG000184015 InterPro:IPR017252
PANTHER:PTHR22847:SF51 UniGene:Hs.77318 HGNC:HGNC:8574
ChiTaRS:PAFAH1B1 EMBL:AC015799 EMBL:AC005696 EMBL:AK293918
IPI:IPI00909586 SMR:B4DF38 STRING:B4DF38 Ensembl:ENST00000451360
UCSC:uc010vqz.2 HOVERGEN:HBG103859 Uniprot:B4DF38
Length = 205
Score = 162 (62.1 bits), Expect = 6.3e-12, P = 6.3e-12
Identities = 32/97 (32%), Positives = 55/97 (56%)
Query: 81 TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPA 140
TI+LWD ++T+ GH + V + P + IVS + ++TI++W+++TG C+K
Sbjct: 2 TIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTG 61
Query: 141 HSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGK 177
H + V + N+DGT+I + S D R+ +T K
Sbjct: 62 HREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK 98
Score = 162 (62.1 bits), Expect = 6.3e-12, P = 6.3e-12
Identities = 46/154 (29%), Positives = 75/154 (48%)
Query: 81 TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPA 140
TI++W+V T +KT GH +V + N I S + ++T+R+W + T +C L
Sbjct: 44 TIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 103
Query: 141 HSDPVTAIDFNRDGTMI----VTSS---YDGLYR-ILDASTPNGKFILVGTLDNTLRLWN 192
H V I + + + T S +D R +L S GKFIL D TLR+W+
Sbjct: 104 HEHVVECISWAPESSYSSISEATGSEVGHDNWVRGVLFHS--GGKFILSCADDKTLRVWD 161
Query: 193 YSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVS 226
Y ++ +KT + + + + S F T Y+V+
Sbjct: 162 YKNKRCMKTLNAHEH--FVTSLDFHKT-APYVVT 192
Score = 158 (60.7 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 44/169 (26%), Positives = 84/169 (49%)
Query: 2 SSDRSLESFRPYT--LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFD 59
S D++++ + T +T GH V V+ + DG L+ S S ++T+ + +++
Sbjct: 40 SRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT----- 94
Query: 60 STPPSPLQKFTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDT 119
+ L++ + IS + AT + +GH N+V + F+ I+S
Sbjct: 95 KECKAELREHEHVVECISWAPESSYSSISEATGSE--VGHDNWVRGVLFHSGGKFILSCA 152
Query: 120 FNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRI 168
++T+R+WD K +C+K L AH VT++DF++ +VT S D ++
Sbjct: 153 DDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 201
>UNIPROTKB|I3L3N5 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005874 InterPro:IPR017252
PANTHER:PTHR22847:SF51 HGNC:HGNC:8574 ChiTaRS:PAFAH1B1
EMBL:AC015799 EMBL:AC005696 Ensembl:ENST00000574468 Bgee:I3L3N5
Uniprot:I3L3N5
Length = 208
Score = 162 (62.1 bits), Expect = 6.3e-12, P = 6.3e-12
Identities = 32/97 (32%), Positives = 55/97 (56%)
Query: 81 TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPA 140
TI+LWD ++T+ GH + V + P + IVS + ++TI++W+++TG C+K
Sbjct: 5 TIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTG 64
Query: 141 HSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGK 177
H + V + N+DGT+I + S D R+ +T K
Sbjct: 65 HREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK 101
Score = 162 (62.1 bits), Expect = 6.3e-12, P = 6.3e-12
Identities = 46/154 (29%), Positives = 75/154 (48%)
Query: 81 TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPA 140
TI++W+V T +KT GH +V + N I S + ++T+R+W + T +C L
Sbjct: 47 TIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 106
Query: 141 HSDPVTAIDFNRDGTMI----VTSS---YDGLYR-ILDASTPNGKFILVGTLDNTLRLWN 192
H V I + + + T S +D R +L S GKFIL D TLR+W+
Sbjct: 107 HEHVVECISWAPESSYSSISEATGSEVGHDNWVRGVLFHS--GGKFILSCADDKTLRVWD 164
Query: 193 YSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVS 226
Y ++ +KT + + + + S F T Y+V+
Sbjct: 165 YKNKRCMKTLNAHEH--FVTSLDFHKT-APYVVT 195
Score = 158 (60.7 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 44/169 (26%), Positives = 84/169 (49%)
Query: 2 SSDRSLESFRPYT--LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFD 59
S D++++ + T +T GH V V+ + DG L+ S S ++T+ + +++
Sbjct: 43 SRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT----- 97
Query: 60 STPPSPLQKFTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDT 119
+ L++ + IS + AT + +GH N+V + F+ I+S
Sbjct: 98 KECKAELREHEHVVECISWAPESSYSSISEATGSE--VGHDNWVRGVLFHSGGKFILSCA 155
Query: 120 FNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRI 168
++T+R+WD K +C+K L AH VT++DF++ +VT S D ++
Sbjct: 156 DDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 204
>TAIR|locus:2157762 [details] [associations]
symbol:AT5G50230 "AT5G50230" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007275 "multicellular
organismal development" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:BT011244 EMBL:BT020329 IPI:IPI00518229
RefSeq:NP_199834.2 UniGene:At.29744 ProteinModelPortal:Q6NNP0
SMR:Q6NNP0 PRIDE:Q6NNP0 EnsemblPlants:AT5G50230.1 GeneID:835088
KEGG:ath:AT5G50230 TAIR:At5g50230 InParanoid:Q6NNP0
PhylomeDB:Q6NNP0 ProtClustDB:CLSN2681670 Genevestigator:Q6NNP0
Uniprot:Q6NNP0
Length = 509
Score = 168 (64.2 bits), Expect = 6.3e-12, Sum P(2) = 6.3e-12
Identities = 43/169 (25%), Positives = 83/169 (49%)
Query: 14 TLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS-------ISNFDSTPPSPL 66
TL ++L G L + + +HD + + ++++ L + +SS + D +
Sbjct: 258 TLIKSLYGSLGNILDMAVTHDNKSVIAATSSNNLFVWDVSSGRVRHTLTGHTDKVCAVDV 317
Query: 67 QKFTG-HEQGISDLATIRLWDVPTATSLKTLIGHTNY-VFCINFNPQSNRIVSDTFNETI 124
KF+ H + TI+LWD+ T++ +N C++ + + + S + +
Sbjct: 318 SKFSSRHVVSAAYDRTIKLWDLHKGYCTNTVLFTSNCNAICLSIDGLT--VFSGHMDGNL 375
Query: 125 RIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDAST 173
R+WDI+TGK L + HS VT++ +R+G I+TS D ++ + D T
Sbjct: 376 RLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRILTSGRDNVHNVFDTRT 424
Score = 124 (48.7 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 43/183 (23%), Positives = 82/183 (44%)
Query: 75 GISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKC 134
G D A +++WD + T +K+L G + + + +++ T + + +WD+ +G+
Sbjct: 243 GGQDRA-VKMWDTNSGTLIKSLYGSLGNILDMAVTHDNKSVIAATSSNNLFVWDVSSGRV 301
Query: 135 LKVLPAHSDPVTAIDFNRDGTM-IVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNY 193
L H+D V A+D ++ + +V+++YD ++ D K T+ T N
Sbjct: 302 RHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLH----KGYCTNTVLFTSNC-NA 356
Query: 194 STRKI--LKTYSGYTNSKYCISSTFSVTNGKY---IVSHRDPVISVA-SHPAKNIIASGA 247
I L +SG+ + + + + GK + H V SV+ S I+ SG
Sbjct: 357 ICLSIDGLTVFSGHMDGNLRL---WDIQTGKLLSEVAGHSSAVTSVSLSRNGNRILTSGR 413
Query: 248 LDN 250
DN
Sbjct: 414 -DN 415
Score = 52 (23.4 bits), Expect = 6.3e-12, Sum P(2) = 6.3e-12
Identities = 9/41 (21%), Positives = 20/41 (48%)
Query: 173 TPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCIS 213
+P+ ++ G+ D ++ +W+ S I+ T+ C S
Sbjct: 448 SPDDDYVAAGSADGSVHVWSLSKGNIVSILKEQTSPILCCS 488
>FB|FBgn0041171 [details] [associations]
symbol:ago "archipelago" species:7227 "Drosophila
melanogaster" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0008054 "cyclin catabolic process" evidence=TAS]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=NAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0030332 "cyclin binding"
evidence=TAS] [GO:0007096 "regulation of exit from mitosis"
evidence=TAS] [GO:0045926 "negative regulation of growth"
evidence=IMP] [GO:0042023 "DNA endoreduplication" evidence=IMP]
[GO:0035147 "branch fusion, open tracheal system" evidence=IMP]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] [GO:0007411 "axon guidance" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0007411 GO:GO:0007088
EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0045926
GO:GO:0019005 GO:GO:0008054 GO:GO:0007096 GO:GO:0035147
GO:GO:0042023 GO:GO:0030332 GeneTree:ENSGT00690000101849
EMBL:AY061300 EMBL:AY075401 RefSeq:NP_523922.1 RefSeq:NP_728964.1
RefSeq:NP_728965.1 UniGene:Dm.2559 ProteinModelPortal:Q9VZF4
SMR:Q9VZF4 DIP:DIP-32477N IntAct:Q9VZF4 MINT:MINT-901835
STRING:Q9VZF4 PaxDb:Q9VZF4 PRIDE:Q9VZF4 EnsemblMetazoa:FBtr0073245
EnsemblMetazoa:FBtr0073246 EnsemblMetazoa:FBtr0073247 GeneID:38516
KEGG:dme:Dmel_CG15010 UCSC:CG15010-RA CTD:38516 FlyBase:FBgn0041171
InParanoid:Q9VZF4 KO:K10260 OMA:DLEEICT OrthoDB:EOG45TB38
PhylomeDB:Q9VZF4 GenomeRNAi:38516 NextBio:809050 Bgee:Q9VZF4
GermOnline:CG15010 GO:GO:0060253 Uniprot:Q9VZF4
Length = 1326
Score = 185 (70.2 bits), Expect = 6.5e-12, P = 6.5e-12
Identities = 66/255 (25%), Positives = 123/255 (48%)
Query: 11 RPYTLTQTLNGHL-RAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDS----TPPSP 65
RP + L GH ++ ++FS G + S S + TL +S + + T
Sbjct: 982 RPVRKPKVLKGHDDHVITCLQFS--GNRIVSGSDDNTLKVWSAVNGKCLRTLVGHTGGVW 1039
Query: 66 LQKFTGHE--QGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNET 123
+ +G+ G +D T+++WD+ + + TL GHT+ V C++ + +++VS + + T
Sbjct: 1040 SSQMSGNIIISGSTD-RTLKVWDMDSGACVHTLQGHTSTVRCMHLH--GSKVVSGSRDAT 1096
Query: 124 IRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGT 183
+R+WDI+ G CL VL H V + + DG +IV+ +YD + +I L G
Sbjct: 1097 LRVWDIEQGSCLHVLVGHLAAVRCVQY--DGKLIVSGAYDYMVKIWHPERQECLHTLQG- 1153
Query: 184 LDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKY-IVSHRDPVISVASHPAKNI 242
+T R+++ L SG ++ + N K+ ++ H+ ++ +NI
Sbjct: 1154 --HTNRVYSLQFDG-LHVVSGSLDTSIRVWDV-ETGNCKHTLMGHQS--LTSGMELRQNI 1207
Query: 243 IASGALDNDRTMKIW 257
+ SG D+ T+K+W
Sbjct: 1208 LVSGNADS--TVKVW 1220
Score = 176 (67.0 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 57/171 (33%), Positives = 84/171 (49%)
Query: 19 LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYS------LSSISNFDSTPPSPLQKFTGH 72
L GHL AV V++ DG+L+ S + + + + L ++ + S LQ F G
Sbjct: 1111 LVGHLAAVRCVQY--DGKLIVSGAYDYMVKIWHPERQECLHTLQGHTNRVYS-LQ-FDGL 1166
Query: 73 EQGISDLAT-IRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKT 131
L T IR+WDV T TL+GH + + + N +VS + T+++WDI T
Sbjct: 1167 HVVSGSLDTSIRVWDVETGNCKHTLMGHQSLTSGMEL--RQNILVSGNADSTVKVWDITT 1224
Query: 132 GKCLKVLPA---HSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFI 179
G+CL+ L H VT + FN +VTSS DG ++ D T G FI
Sbjct: 1225 GQCLQTLSGPNKHHSAVTCLQFN--SRFVVTSSDDGTVKLWDVKT--GDFI 1271
Score = 141 (54.7 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 44/166 (26%), Positives = 85/166 (51%)
Query: 80 ATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLP 139
AT+R+WD+ + L L+GH V C+ ++ IVS ++ ++IW + +CL L
Sbjct: 1095 ATLRVWDIEQGSCLHVLVGHLAAVRCVQYD--GKLIVSGAYDYMVKIWHPERQECLHTLQ 1152
Query: 140 AHSDPVTAIDFNR--------DGTMIVTSSYDG--LYRILD-ASTPNG----KFILV-GT 183
H++ V ++ F+ D ++ V G + ++ S +G + ILV G
Sbjct: 1153 GHTNRVYSLQFDGLHVVSGSLDTSIRVWDVETGNCKHTLMGHQSLTSGMELRQNILVSGN 1212
Query: 184 LDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRD 229
D+T+++W+ +T + L+T SG +K+ + T N +++V+ D
Sbjct: 1213 ADSTVKVWDITTGQCLQTLSG--PNKHHSAVTCLQFNSRFVVTSSD 1256
Score = 130 (50.8 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 39/133 (29%), Positives = 68/133 (51%)
Query: 18 TLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGHE---- 73
TL GH V ++F DG + S S + ++ + + + N T +G E
Sbjct: 1150 TLQGHTNRVYSLQF--DGLHVVSGSLDTSIRVWDVET-GNCKHTLMGHQSLTSGMELRQN 1206
Query: 74 ---QGISDLATIRLWDVPTATSLKTLIG---HTNYVFCINFNPQSNRIVSDTFNETIRIW 127
G +D +T+++WD+ T L+TL G H + V C+ FN S +V+ + + T+++W
Sbjct: 1207 ILVSGNAD-STVKVWDITTGQCLQTLSGPNKHHSAVTCLQFN--SRFVVTSSDDGTVKLW 1263
Query: 128 DIKTGKCLKVLPA 140
D+KTG ++ L A
Sbjct: 1264 DVKTGDFIRNLVA 1276
>FB|FBgn0036733 [details] [associations]
symbol:U4-U6-60K "U4-U6 small nuclear riboprotein factor 60K"
species:7227 "Drosophila melanogaster" [GO:0005688 "U6 snRNP"
evidence=ISS] [GO:0005687 "U4 snRNP" evidence=ISS] [GO:0008380 "RNA
splicing" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0030532 "small nuclear ribonucleoprotein complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0030621 "U4 snRNA binding" evidence=IDA] [GO:0017070 "U6 snRNA
binding" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0030532
GO:GO:0017070 GO:GO:0030621 InterPro:IPR014906 Pfam:PF08799
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR HSSP:O43172
EMBL:AY061623 RefSeq:NP_648990.1 UniGene:Dm.987 SMR:Q9VVI0
MINT:MINT-295539 STRING:Q9VVI0 EnsemblMetazoa:FBtr0075209
GeneID:39955 KEGG:dme:Dmel_CG6322 UCSC:CG6322-RA CTD:39955
FlyBase:FBgn0036733 InParanoid:Q9VVI0 OrthoDB:EOG4R7SRZ
GenomeRNAi:39955 NextBio:816257 Uniprot:Q9VVI0
Length = 553
Score = 181 (68.8 bits), Expect = 7.2e-12, P = 7.2e-12
Identities = 58/215 (26%), Positives = 94/215 (43%)
Query: 54 SISNFDSTPPSPLQKFTGHEQGISDLATI------RLWDVPTATSLKTLIGHTNYVFCIN 107
SI++ P + K H G LAT RLWD+ T + GH V C++
Sbjct: 344 SIADITGHMPHRVSKVAFHPSG-RFLATACYDSSWRLWDLEQKTEVLHQEGHAKPVHCLS 402
Query: 108 FNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYR 167
++ + +V+ + R+WD++TG+C+ L H V +DF+ +G I T S D +
Sbjct: 403 YHSDGSVLVTGGLDAFGRVWDLRTGRCIMFLEGHLGAVFGVDFSPNGFHIATGSQDNTCK 462
Query: 168 ILDASTPNGKFILVGTLDNTLRLWNYSTR--KILKTYSGYTNSKYCISSTFSVTNGKYIV 225
I D + + N + Y L T S + +K + T+ K +
Sbjct: 463 IWDLRRRQPVYTIPAHT-NLISDVKYQQECGSFLVTCSYDSTTKIWSNKTWQPL--KTLQ 519
Query: 226 SHRDPVISVASHPAKNIIASGALDNDRTMKIWTQE 260
H + VISV P IA+ + D RT K+W+ +
Sbjct: 520 GHDNKVISVDIAPNSQYIATTSFD--RTFKLWSPD 552
Score = 114 (45.2 bits), Expect = 0.00078, P = 0.00078
Identities = 25/104 (24%), Positives = 49/104 (47%)
Query: 82 IRLWDVPTATSLKTLIGHTNY-VFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPA 140
++LW S+ + GH + V + F+P + + ++ + R+WD++ +
Sbjct: 334 VKLWGFNNEESIADITGHMPHRVSKVAFHPSGRFLATACYDSSWRLWDLEQKTEVLHQEG 393
Query: 141 HSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTL 184
H+ PV + ++ DG+++VT D R+ D T L G L
Sbjct: 394 HAKPVHCLSYHSDGSVLVTGGLDAFGRVWDLRTGRCIMFLEGHL 437
>FB|FBgn0046222 [details] [associations]
symbol:CG1109 species:7227 "Drosophila melanogaster"
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:Q04724
GeneTree:ENSGT00540000070914 KO:K15542 EMBL:AY051695
RefSeq:NP_730982.1 RefSeq:NP_730983.1 UniGene:Dm.4508 SMR:Q9VNG2
STRING:Q9VNG2 EnsemblMetazoa:FBtr0078713 EnsemblMetazoa:FBtr0078714
GeneID:40698 KEGG:dme:Dmel_CG1109 UCSC:CG1109-RA
FlyBase:FBgn0046222 InParanoid:Q9VNG2 OMA:TLRIWDF OrthoDB:EOG49ZW47
GenomeRNAi:40698 NextBio:820117 Uniprot:Q9VNG2
Length = 807
Score = 159 (61.0 bits), Expect = 7.3e-12, Sum P(2) = 7.3e-12
Identities = 35/96 (36%), Positives = 54/96 (56%)
Query: 77 SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFN--ETIRIWDIKTGKC 134
SD T+R+WD + L GH V C++++PQ IVS + + + I+IWD K+G
Sbjct: 248 SDDGTLRIWDFMRCQEERVLRGHGADVKCVHWHPQKGMIVSGSKDNQQPIKIWDPKSGIA 307
Query: 135 LKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
L L AH V + +N +G +VT+S D L ++ D
Sbjct: 308 LATLHAHKSTVMDLKWNDNGNWLVTASRDHLLKLFD 343
Score = 69 (29.3 bits), Expect = 7.3e-12, Sum P(2) = 7.3e-12
Identities = 14/36 (38%), Positives = 23/36 (63%)
Query: 226 SHRDPVISVASHPAKNIIASGALDNDRTMKIWTQEK 261
+H V ++A HP +I+ SG+ ND T+K WT+ +
Sbjct: 400 AHDSIVWTLAWHPLGHILCSGS--NDHTIKFWTRNR 433
>UNIPROTKB|F1NFT8 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0016593 "Cdc73/Paf1 complex" evidence=IEA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IEA] [GO:0035327
"transcriptionally active chromatin" evidence=IEA] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=IEA] [GO:0055087
"Ski complex" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087
OMA:IATGSHH IPI:IPI00584957 EMBL:AADN02040454
ProteinModelPortal:F1NFT8 PRIDE:F1NFT8 Ensembl:ENSGALT00000034634
Uniprot:F1NFT8
Length = 305
Score = 176 (67.0 bits), Expect = 7.5e-12, P = 7.5e-12
Identities = 51/177 (28%), Positives = 81/177 (45%)
Query: 15 LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS---ISNFDSTPPSPLQ-KFT 70
L TL GH V V SH G + SSS + + + L + I + D+ P F+
Sbjct: 56 LQWTLEGHQLGVVSVDISHTGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVDAWSLAFS 115
Query: 71 GHEQGI---SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIW 127
Q + S + + ++ V T +L ++ I ++P + S + I I+
Sbjct: 116 PDSQFLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIF 175
Query: 128 DIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTL 184
DI TGK L L H+ P+ ++ F+ D ++VT+S DG +I D N L GTL
Sbjct: 176 DIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHAN----LAGTL 228
Score = 137 (53.3 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 37/149 (24%), Positives = 70/149 (46%)
Query: 29 VKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTP--PSPLQK--FTGHEQGI---SDLAT 81
+ +S DG+ L S + + + + +++ + P++ F+ Q + SD
Sbjct: 154 IAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGY 213
Query: 82 IRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAH 141
I+++DV A TL GH ++V + F P VS + ++++++WD T C+ H
Sbjct: 214 IKIYDVQHANLAGTLSGHGSWVLNVAFCPDDTHFVSSSSDKSVKVWDAGTRTCVHTFFDH 273
Query: 142 SDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
D V + +N G+ IV+ D I D
Sbjct: 274 QDQVWGVKYNGSGSKIVSVGDDQEIHIYD 302
Score = 124 (48.7 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 42/143 (29%), Positives = 64/143 (44%)
Query: 32 SHDGRLLTSSSAEKTLLTYSLSSISNFD-STPPSPLQKFTGHEQGISDLATIRLWDVPTA 90
SH G++ E YSL + F S SP K+ G D I ++D+ T
Sbjct: 125 SHVGKV-NIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLA--SGAID-GIINIFDIATG 180
Query: 91 TSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDF 150
L TL GH + + F+P S +V+ + + I+I+D++ L H V + F
Sbjct: 181 KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAF 240
Query: 151 NRDGTMIVTSSYDGLYRILDAST 173
D T V+SS D ++ DA T
Sbjct: 241 CPDDTHFVSSSSDKSVKVWDAGT 263
Score = 112 (44.5 bits), Expect = 0.00050, P = 0.00050
Identities = 44/186 (23%), Positives = 80/186 (43%)
Query: 76 ISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCL 135
+ DL + W+ TL GH V ++ + + S + + IR+WD++TGK +
Sbjct: 40 LDDLVKVWKWNDEKLDLQWTLEGHQLGVVSVDISHTGSIAASSSLDAHIRLWDLETGKQI 99
Query: 136 KVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYST 195
K + A ++ F+ D + T S+ G I T ++ L T + YS
Sbjct: 100 KSIDAGPVDAWSLAFSPDSQFLATGSHVGKVNIFGVETGKKEYSL-DTRGKFILSIAYSP 158
Query: 196 R-KILKTYSGYTNSKYCISSTFSVTNGKYIVS---HRDPVISVASHPAKNIIASGALDND 251
K L SG + I + F + GK + + H P+ S+ P ++ + + +D
Sbjct: 159 DGKYLA--SGAIDG---IINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTAS--DD 211
Query: 252 RTMKIW 257
+KI+
Sbjct: 212 GYIKIY 217
>UNIPROTKB|Q5ZJH5 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045638 "negative regulation of myeloid
cell differentiation" evidence=ISS] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISS] [GO:2001162
"positive regulation of histone H3-K79 methylation" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0080182
"histone H3-K4 trimethylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW
EMBL:AJ720459 IPI:IPI00584957 RefSeq:NP_001005805.1
UniGene:Gga.4665 ProteinModelPortal:Q5ZJH5 GeneID:415359
KEGG:gga:415359 InParanoid:Q5ZJH5 NextBio:20818980 Uniprot:Q5ZJH5
Length = 305
Score = 176 (67.0 bits), Expect = 7.5e-12, P = 7.5e-12
Identities = 51/177 (28%), Positives = 81/177 (45%)
Query: 15 LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS---ISNFDSTPPSPLQ-KFT 70
L TL GH V V SH G + SSS + + + L + I + D+ P F+
Sbjct: 56 LQWTLEGHQLGVVSVDISHTGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVDAWSLAFS 115
Query: 71 GHEQGI---SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIW 127
Q + S + + ++ V T +L ++ I ++P + S + I I+
Sbjct: 116 PDSQFLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIF 175
Query: 128 DIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTL 184
DI TGK L L H+ P+ ++ F+ D ++VT+S DG +I D N L GTL
Sbjct: 176 DIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHAN----LAGTL 228
Score = 137 (53.3 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 37/149 (24%), Positives = 70/149 (46%)
Query: 29 VKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTP--PSPLQK--FTGHEQGI---SDLAT 81
+ +S DG+ L S + + + + +++ + P++ F+ Q + SD
Sbjct: 154 IAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGY 213
Query: 82 IRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAH 141
I+++DV A TL GH ++V + F P VS + ++++++WD T C+ H
Sbjct: 214 IKIYDVQHANLAGTLSGHGSWVLNVAFCPDDTHFVSSSSDKSVKVWDAGTRTCVHTFFDH 273
Query: 142 SDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
D V + +N G+ IV+ D I D
Sbjct: 274 QDQVWGVKYNGSGSKIVSVGDDQEIHIYD 302
Score = 124 (48.7 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 42/143 (29%), Positives = 64/143 (44%)
Query: 32 SHDGRLLTSSSAEKTLLTYSLSSISNFD-STPPSPLQKFTGHEQGISDLATIRLWDVPTA 90
SH G++ E YSL + F S SP K+ G D I ++D+ T
Sbjct: 125 SHVGKV-NIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLA--SGAID-GIINIFDIATG 180
Query: 91 TSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDF 150
L TL GH + + F+P S +V+ + + I+I+D++ L H V + F
Sbjct: 181 KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAF 240
Query: 151 NRDGTMIVTSSYDGLYRILDAST 173
D T V+SS D ++ DA T
Sbjct: 241 CPDDTHFVSSSSDKSVKVWDAGT 263
Score = 112 (44.5 bits), Expect = 0.00050, P = 0.00050
Identities = 44/186 (23%), Positives = 80/186 (43%)
Query: 76 ISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCL 135
+ DL + W+ TL GH V ++ + + S + + IR+WD++TGK +
Sbjct: 40 LDDLVKVWKWNDEKLDLQWTLEGHQLGVVSVDISHTGSIAASSSLDAHIRLWDLETGKQI 99
Query: 136 KVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYST 195
K + A ++ F+ D + T S+ G I T ++ L T + YS
Sbjct: 100 KSIDAGPVDAWSLAFSPDSQFLATGSHVGKVNIFGVETGKKEYSL-DTRGKFILSIAYSP 158
Query: 196 R-KILKTYSGYTNSKYCISSTFSVTNGKYIVS---HRDPVISVASHPAKNIIASGALDND 251
K L SG + I + F + GK + + H P+ S+ P ++ + + +D
Sbjct: 159 DGKYLA--SGAIDG---IINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTAS--DD 211
Query: 252 RTMKIW 257
+KI+
Sbjct: 212 GYIKIY 217
>UNIPROTKB|Q3SZK1 [details] [associations]
symbol:AAMP "Angio-associated migratory cell protein"
species:9913 "Bos taurus" [GO:0045766 "positive regulation of
angiogenesis" evidence=NAS] [GO:0010595 "positive regulation of
endothelial cell migration" evidence=IMP] [GO:0014909 "smooth
muscle cell migration" evidence=ISS] [GO:0009986 "cell surface"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005886 GO:GO:0005737 GO:GO:0009986
GO:GO:0030154 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 EMBL:BC102815 IPI:IPI00693899
RefSeq:NP_001070463.1 UniGene:Bt.20293 ProteinModelPortal:Q3SZK1
STRING:Q3SZK1 PRIDE:Q3SZK1 Ensembl:ENSBTAT00000005126 GeneID:767919
KEGG:bta:767919 CTD:14 GeneTree:ENSGT00690000102167
HOGENOM:HOG000261676 HOVERGEN:HBG061307 InParanoid:Q3SZK1
OMA:VWSFEVG OrthoDB:EOG4D26PX NextBio:20918276 ArrayExpress:Q3SZK1
GO:GO:0001525 GO:GO:0045766 GO:GO:0010595 GO:GO:0014909
Uniprot:Q3SZK1
Length = 434
Score = 161 (61.7 bits), Expect = 9.6e-12, Sum P(2) = 9.6e-12
Identities = 50/168 (29%), Positives = 75/168 (44%)
Query: 21 GHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGHEQ------ 74
GH +V+ FSHD L+ + L + + + S L+ H +
Sbjct: 132 GHKDSVTCAGFSHDSTLVATGDMSGLLKVWQVDTKEEVWSFEAGDLEWMEWHPRAPVLLA 191
Query: 75 GISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKC 134
G +D T +W VPT KT G C P R V + TIRIWD+K G
Sbjct: 192 GTADGNTW-MWKVPTG-DCKTFQGPNCPATCGRVLPDGKRAVVGYEDGTIRIWDLKQGNS 249
Query: 135 LKVLPA---HSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFI 179
+ VL H P+T + N+DG++I+T S D +++ A+T GK +
Sbjct: 250 IHVLKGTEGHQGPLTCVATNQDGSLILTGSVDCQAKLVSATT--GKVV 295
Score = 113 (44.8 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 21/76 (27%), Positives = 39/76 (51%)
Query: 99 HTNYVFCINFNPQSNRI-VSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMI 157
H+ VFC++ +P++N + V+ ++ +W + G+ L H D VT F+ D T++
Sbjct: 90 HSASVFCVSLDPKTNTLAVTGGEDDKAFVWRLSDGELLFECAGHKDSVTCAGFSHDSTLV 149
Query: 158 VTSSYDGLYRILDAST 173
T GL ++ T
Sbjct: 150 ATGDMSGLLKVWQVDT 165
Score = 61 (26.5 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 13/44 (29%), Positives = 25/44 (56%)
Query: 174 PNGKFILVGTLDNTLRLWNY---STRKILKTYSGYTNSKYCISS 214
P+GK +VG D T+R+W+ ++ +LK G+ C+++
Sbjct: 225 PDGKRAVVGYEDGTIRIWDLKQGNSIHVLKGTEGHQGPLTCVAT 268
Score = 57 (25.1 bits), Expect = 9.6e-12, Sum P(2) = 9.6e-12
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 183 TLDNTLRLWNYSTRKILKTYSGYT 206
+LD +RLW+ T ++L Y G+T
Sbjct: 377 SLDGIVRLWDARTGRLLTDYRGHT 400
Score = 45 (20.9 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 10/31 (32%), Positives = 13/31 (41%)
Query: 174 PNGKFILVGTLDNTLRLWNYSTRKILKTYSG 204
P +L GT D +W T KT+ G
Sbjct: 184 PRAPVLLAGTADGNTWMWKVPTGDC-KTFQG 213
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 175 (66.7 bits), Expect = 9.9e-12, P = 9.9e-12
Identities = 52/180 (28%), Positives = 86/180 (47%)
Query: 81 TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPA 140
+IRLWDV + L L GH V ++F+P S ++ S +++ +W++++G+ + +L
Sbjct: 91 SIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRRVHLLVG 150
Query: 141 HSDPVTAIDFNRDGTMIVTSSYDGLYRILD--ASTPNGKFI-LVGTLDNTLRLWNYSTRK 197
H D + + DF+ + T S+D I D ASTP + L G N L YS
Sbjct: 151 HCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCLC-YSASG 209
Query: 198 ILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDNDRTMKIW 257
+L SG + C+ + + H V S+A P + +AS RT+K+W
Sbjct: 210 LLA--SGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSPDELKLASAGYS--RTVKVW 265
Score = 155 (59.6 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 47/183 (25%), Positives = 83/183 (45%)
Query: 77 SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLK 136
SD + +W + L L GH V F+P I S + + +IR+WD+ KCL
Sbjct: 45 SDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLH 104
Query: 137 VLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYS-T 195
VL H V + F+ D + + +D + + + +LVG D+ ++ ++S T
Sbjct: 105 VLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRRVHLLVGHCDS-IQSSDFSPT 163
Query: 196 RKILKTYS-GYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDNDRTM 254
L T S T + + ++ V + + H IS + A ++ASG+ D +T+
Sbjct: 164 SDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGN-ISCLCYSASGLLASGSWD--KTI 220
Query: 255 KIW 257
+W
Sbjct: 221 CVW 223
Score = 145 (56.1 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 52/198 (26%), Positives = 87/198 (43%)
Query: 2 SSDRSLESF---RPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS---- 54
SSD S+ + R L L GH R+V V FS D + L S +K + + + S
Sbjct: 87 SSDHSIRLWDVARSKCL-HVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRRV 145
Query: 55 ---ISNFDSTPPSPLQKFTGH-EQGISDLATIRLWDVPTAT---SLKTLIGHTNYVFCIN 107
+ + DS S + G D +T+ +WD+ +T S L GHT + C+
Sbjct: 146 HLLVGHCDSIQSSDFSPTSDSLATGSWD-STVHIWDLRASTPVVSYHNLEGHTGNISCLC 204
Query: 108 FNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYR 167
++ S + S ++++TI +W T L H+ V ++ F+ D + ++ Y +
Sbjct: 205 YSA-SGLLASGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSPDELKLASAGYSRTVK 263
Query: 168 ILDASTPNGKFILVGTLD 185
+ D T L G LD
Sbjct: 264 VWDCLTGKCLETLKGMLD 281
Score = 142 (55.0 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 46/158 (29%), Positives = 70/158 (44%)
Query: 19 LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGHEQGISD 78
L GH ++ FS L + S + T+ + L + STP GH IS
Sbjct: 148 LVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRA-----STPVVSYHNLEGHTGNISC 202
Query: 79 LA--------------TIRLWDVPTATSLKT-LIGHTNYVFCINFNPQSNRIVSDTFNET 123
L TI +W PT +L L GHT +V + F+P ++ S ++ T
Sbjct: 203 LCYSASGLLASGSWDKTICVWK-PTTNNLPLQLKGHTIWVNSLAFSPDELKLASAGYSRT 261
Query: 124 IRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSS 161
+++WD TGKCL+ L D A F DG ++V+ +
Sbjct: 262 VKVWDCLTGKCLETLKGMLDVAHACIFTPDGKLLVSGA 299
Score = 129 (50.5 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 39/159 (24%), Positives = 72/159 (45%)
Query: 99 HTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIV 158
H V C F+P +++ + + + +W K+G+ L L H PV + F+ DG +I
Sbjct: 25 HHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLIA 84
Query: 159 TSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSV 218
+SS D R+ D + +L G ++ ++S + SG + + + S
Sbjct: 85 SSSSDHSIRLWDVARSKCLHVLKGH-QRSVETVSFSPDS-KQLASGGWDKRAIVWEVQSG 142
Query: 219 TNGKYIVSHRDPVISVASHPAKNIIASGALDNDRTMKIW 257
+V H D + S P + +A+G+ D+ T+ IW
Sbjct: 143 RRVHLLVGHCDSIQSSDFSPTSDSLATGSWDS--TVHIW 179
Score = 118 (46.6 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 38/170 (22%), Positives = 80/170 (47%)
Query: 19 LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSIS----------NFDSTPPSPLQK 68
L GH V FS DGRL+ SSS++ ++ + ++ + ++ SP K
Sbjct: 64 LAGHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSK 123
Query: 69 FTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWD 128
G D I +W+V + + L+GH + + +F+P S+ + + +++ T+ IWD
Sbjct: 124 QLA--SGGWDKRAI-VWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWD 180
Query: 129 IKTGKCLKV---LPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPN 175
++ + L H+ ++ + ++ G ++ + S+D + +T N
Sbjct: 181 LRASTPVVSYHNLEGHTGNISCLCYSASG-LLASGSWDKTICVWKPTTNN 229
Score = 46 (21.3 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 187 TLRLWNYSTRKILKTYSGYTNSKY-CISSTFSVTNGKYIVS 226
T+++W+ T K L+T G + + CI F+ +GK +VS
Sbjct: 261 TVKVWDCLTGKCLETLKGMLDVAHACI---FT-PDGKLLVS 297
>POMBASE|SPAC227.12 [details] [associations]
symbol:SPAC227.12 "U4/U6 x U5 tri-snRNP complex subunit
Prp4 family (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] [GO:0045292 "mRNA cis splicing, via spliceosome"
evidence=ISS] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 PomBase:SPAC227.12
GO:GO:0005829 EMBL:CU329670 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0046540 HSSP:P16649 GO:GO:0045292
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
OMA:CKIWDLR OrthoDB:EOG4V1B90 PIR:T50168 RefSeq:NP_592966.1
ProteinModelPortal:Q9UTC7 IntAct:Q9UTC7 STRING:Q9UTC7
EnsemblFungi:SPAC227.12.1 GeneID:2541477 KEGG:spo:SPAC227.12
NextBio:20802576 Uniprot:Q9UTC7
Length = 462
Score = 178 (67.7 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 55/182 (30%), Positives = 89/182 (48%)
Query: 81 TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETI-RIWDIKTGKCLKVLP 139
T RLWDV T L GH+ +F I P + +VS N+ I RIWD+++GK + VL
Sbjct: 288 TWRLWDVHTGVELLMQEGHSEGIFSIACQPDGS-LVSSGGNDAIGRIWDLRSGKSIMVLD 346
Query: 140 AHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVG--TLDNTLRLWNYSTRK 197
H + A+ ++ +G + TSS D +I D + + +L + +R +
Sbjct: 347 EHIRQIVAMAWSPNGYQLATSSADDTVKIWDLRKVSLAHTIPAHSSLVSDVRYIESGVNR 406
Query: 198 ILKTYSGYTNSKYCIS--STFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDNDRTMK 255
+ T SGY C+ + + + K +V H + V+SV + I+SG DRT+K
Sbjct: 407 FIAT-SGYDG---CVKLWNPLNCSLIKSMVGHEEKVMSVDGY-GDRFISSGY---DRTIK 458
Query: 256 IW 257
+W
Sbjct: 459 LW 460
Score = 153 (58.9 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 60/206 (29%), Positives = 96/206 (46%)
Query: 1 MSSDRSLESFRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSS---AEKTLLTYSLSSISN 57
+S S+E + L + G R ++ V+FS++G S S K + +LS +
Sbjct: 150 LSGKSSIEHLQKAELMGSQIGGERPIAIVRFSNNGNHFASGSWGGQVKVWNSDNLSEVQL 209
Query: 58 FDSTPPS-------PL-QKFTGH-EQ-----GISDLATIRLWDVPTATSLKTLIGHTNYV 103
F PL Q + EQ G +D T+ LW +T L L GH V
Sbjct: 210 FRGHTDRVSGLDWYPLCQAWDADSEQLTLATGAAD-NTVCLWKASQSTPLLRLEGHLARV 268
Query: 104 FCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYD 163
+ F+P + +VS +F+ T R+WD+ TG L + HS+ + +I DG+++ + D
Sbjct: 269 GRVAFHPSGDYLVSASFDTTWRLWDVHTGVELLMQEGHSEGIFSIACQPDGSLVSSGGND 328
Query: 164 GLYRILDASTPNGKFILVGTLDNTLR 189
+ RI D + GK I+V LD +R
Sbjct: 329 AIGRIWDLRS--GKSIMV--LDEHIR 350
>WB|WBGene00015974 [details] [associations]
symbol:C18E3.5 species:6239 "Caenorhabditis elegans"
[GO:0018991 "oviposition" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0018991 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 HOGENOM:HOG000091644
OMA:HAGSVNE EMBL:FO080611 GeneTree:ENSGT00690000101787
RefSeq:NP_491325.1 ProteinModelPortal:O02097 SMR:O02097
STRING:O02097 PaxDb:O02097 EnsemblMetazoa:C18E3.5.1
EnsemblMetazoa:C18E3.5.2 GeneID:172015 KEGG:cel:CELE_C18E3.5
UCSC:C18E3.5 CTD:172015 WormBase:C18E3.5 InParanoid:O02097
NextBio:873669 Uniprot:O02097
Length = 331
Score = 175 (66.7 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 49/173 (28%), Positives = 86/173 (49%)
Query: 82 IRLWDV-PTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPA 140
I LW+V + L GH + + FN S+ +VS ++T+R+WD++TG C++ +
Sbjct: 60 IFLWNVFGECENFAVLKGHKGAIMEVKFNADSSHLVSAGTDKTVRVWDMETGSCIRNFKS 119
Query: 141 HSDPVTAIDFNRDGT-MIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYSTRKIL 199
H+D V ++D NR G MI ++S DG + D + + T +N + ++
Sbjct: 120 HTDIVNSVDVNRRGPQMICSASDDGTVMVHDMRSKEAAKKFICKYQQTAVTFNDAADNVI 179
Query: 200 KTYSGYTNSKYCISSTFSVTNG-KYIVS-HRDPVISVA-SHPAKNIIASGALD 249
G N I + N +Y++S HRD + S++ SH N + S ++D
Sbjct: 180 --CGGIDNQ---IKVWDMLRNDVRYVLSGHRDTITSLSVSHNG-NFLLSNSMD 226
Score = 122 (48.0 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 55/247 (22%), Positives = 96/247 (38%)
Query: 19 LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSL---SSISNFDSTPPSPLQKFTGHEQG 75
L GH A+ VKF+ D L S+ +KT+ + + S I NF S + + +G
Sbjct: 75 LKGHKGAIMEVKFNADSSHLVSAGTDKTVRVWDMETGSCIRNFKSHTDI-VNSVDVNRRG 133
Query: 76 ------ISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDI 129
SD T+ + D+ + + K I + FN ++ ++ + I++WD+
Sbjct: 134 PQMICSASDDGTVMVHDMRSKEAAKKFICKYQQT-AVTFNDAADNVICGGIDNQIKVWDM 192
Query: 130 KTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDAS--TPNGKFIL--VGTLD 185
VL H D +T++ + +G ++++S D D P + + G
Sbjct: 193 LRNDVRYVLSGHRDTITSLSVSHNGNFLLSNSMDCSLMSWDIRPFVPAQRLVARYQGASH 252
Query: 186 N---TLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNI 242
N L +S R T Y ++ K + H V A HP + I
Sbjct: 253 NFEKNLLKCGWSPRDNYITAGSADRFVYVWNAKSRACVYK-LPGHLGSVNCTALHPTQQI 311
Query: 243 IASGALD 249
+ S D
Sbjct: 312 LLSAGSD 318
Score = 117 (46.2 bits), Expect = 0.00016, P = 0.00016
Identities = 37/184 (20%), Positives = 80/184 (43%)
Query: 16 TQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSL-SSISNF---DSTPPSPLQ-KF- 69
T L GH + +FS DG L S+ ++ + +++ NF + ++ KF
Sbjct: 29 TMVLQGHGGEIYTSQFSSDGSFLASAGYDQQIFLWNVFGECENFAVLKGHKGAIMEVKFN 88
Query: 70 --TGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNE-TIRI 126
+ H T+R+WD+ T + ++ HT+ V ++ N + +++ ++ T+ +
Sbjct: 89 ADSSHLVSAGTDKTVRVWDMETGSCIRNFKSHTDIVNSVDVNRRGPQMICSASDDGTVMV 148
Query: 127 WDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDN 186
D+++ + K TA+ FN ++ D ++ D + +++L G D
Sbjct: 149 HDMRSKEAAKKFICKYQQ-TAVTFNDAADNVICGGIDNQIKVWDMLRNDVRYVLSGHRDT 207
Query: 187 TLRL 190
L
Sbjct: 208 ITSL 211
>WB|WBGene00011051 [details] [associations]
symbol:pfs-2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] [GO:0044428 "nuclear part" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0018996 eggNOG:COG2319 GO:GO:0040011
HSSP:P16649 GO:GO:0044428 GeneTree:ENSGT00540000070914 EMBL:Z83120
KO:K15542 RefSeq:NP_496985.1 ProteinModelPortal:Q9NAN8 SMR:Q9NAN8
PaxDb:Q9NAN8 EnsemblMetazoa:R06A4.9.1 EnsemblMetazoa:R06A4.9.2
GeneID:175092 KEGG:cel:CELE_R06A4.9 UCSC:R06A4.9.1 CTD:175092
WormBase:R06A4.9 InParanoid:Q9NAN8 OMA:LTKFIRT NextBio:886718
Uniprot:Q9NAN8
Length = 809
Score = 166 (63.5 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 35/97 (36%), Positives = 53/97 (54%)
Query: 77 SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVS---DTFNETIRIWDIKTGK 133
SD T R+WD T + L GH V CI+++P I + DT + ++IWD K+G
Sbjct: 236 SDDGTARVWDFARYTEERVLRGHGAEVRCIDWHPTKGLIATGSRDT-QQPVKIWDPKSGS 294
Query: 134 CLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
CL L H V A++FN++G ++T D L ++ D
Sbjct: 295 CLATLQEHKSSVMAVEFNKNGNWLLTGGRDHLVKMYD 331
Score = 57 (25.1 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 226 SHRDPVISVASHPAKNIIASGALDNDRTMKIWTQEK 261
+H + S+ HP +I+A+G+ ND K W + +
Sbjct: 387 AHDQAIWSMKWHPLGHILATGS--NDNNTKFWARNR 420
Score = 46 (21.3 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 226 SHRDPVISVASHPA-KNIIASGALDNDRTMKIWTQEKE 262
+H+ VIS+A HP + + SG D ++ W + E
Sbjct: 343 AHKKEVISLAWHPIHEGLFVSGG--GDGSIVYWMVDGE 378
Score = 38 (18.4 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 6/18 (33%), Positives = 9/18 (50%)
Query: 174 PNGKFILVGTLDNTLRLW 191
P G + G+ DN + W
Sbjct: 399 PLGHILATGSNDNNTKFW 416
>SGD|S000000379 [details] [associations]
symbol:SWD3 "Essential subunit of the COMPASS (Set1C)
complex" species:4932 "Saccharomyces cerevisiae" [GO:0005694
"chromosome" evidence=IEA] [GO:0051568 "histone H3-K4 methylation"
evidence=IMP;IDA] [GO:0048188 "Set1C/COMPASS complex" evidence=IPI]
[GO:0042800 "histone methyltransferase activity (H3-K4 specific)"
evidence=IDA;IMP] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0005634 "nucleus" evidence=IEA] [GO:0000781
"chromosome, telomeric region" evidence=IEA] [GO:0000723 "telomere
maintenance" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000000379 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 EMBL:BK006936
GO:GO:0006348 GO:GO:0048188 GO:GO:0051568 GO:GO:0000781
GO:GO:0000723 KO:K14963 OrthoDB:EOG49CTJ0 EMBL:Z36043 EMBL:AY693212
PIR:S46046 RefSeq:NP_009734.1 ProteinModelPortal:P38123 SMR:P38123
DIP:DIP-1754N IntAct:P38123 MINT:MINT-393581 STRING:P38123
PaxDb:P38123 PeptideAtlas:P38123 EnsemblFungi:YBR175W GeneID:852472
KEGG:sce:YBR175W CYGD:YBR175w HOGENOM:HOG000091642 OMA:IRIWCAR
NextBio:971432 Genevestigator:P38123 GermOnline:YBR175W
Uniprot:P38123
Length = 315
Score = 174 (66.3 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 54/173 (31%), Positives = 86/173 (49%)
Query: 10 FRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLS--SISNFDSTPPS-PL 66
F+ T T NG L+A K S DG+ L + +L Y ++ ++S T + P
Sbjct: 2 FQFVTPVGTQNG-LKATC-AKISPDGQFLAITQG-LNILIYDINRRTVSQTLVTSHARPF 58
Query: 67 QKFTGHEQG-----ISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFN 121
+ G SD ++ + + L T IGHT V + FN + N + + + +
Sbjct: 59 SELCWSPDGQCIATASDDFSVEIIHLSYGL-LHTFIGHTAPVISLTFNRKGNLLFTSSMD 117
Query: 122 ETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTS-SYDGLYRILDAST 173
E+I+IWD G +K + AHS+ V ++D + + I++S SYDGL RI DA T
Sbjct: 118 ESIKIWDTLNGSLMKTISAHSEAVVSVDVPMNDSSILSSGSYDGLIRIFDAET 170
Score = 143 (55.4 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 44/173 (25%), Positives = 87/173 (50%)
Query: 14 TLTQTL-NGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLS-SISNFDSTPPSPLQKFTG 71
T++QTL H R S + +S DG+ + ++S + ++ LS + + +P+ T
Sbjct: 45 TVSQTLVTSHARPFSELCWSPDGQCIATASDDFSVEIIHLSYGLLHTFIGHTAPVISLTF 104
Query: 72 HEQG----ISDL-ATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSD-TFNETIR 125
+ +G S + +I++WD + +KT+ H+ V ++ + I+S +++ IR
Sbjct: 105 NRKGNLLFTSSMDESIKIWDTLNGSLMKTISAHSEAVVSVDVPMNDSSILSSGSYDGLIR 164
Query: 126 IWDIKTGKCLKVLPAHSD--------PVTAIDFNRDGTMIVTSSYDGLYRILD 170
I+D +TG CLK L D P++ + F+ + ++ S DG+ +I D
Sbjct: 165 IFDAETGHCLKTLTYDKDWKRENGVVPISQVKFSENARYLLVKSLDGVVKIWD 217
>ZFIN|ZDB-GENE-040718-126 [details] [associations]
symbol:wdr83 "WD repeat domain containing 83"
species:7955 "Danio rerio" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040718-126 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091642
EMBL:BC076138 IPI:IPI00510406 RefSeq:NP_001002429.1
UniGene:Dr.80944 ProteinModelPortal:Q6DH44 STRING:Q6DH44
PRIDE:Q6DH44 GeneID:436702 KEGG:dre:436702 CTD:84292
HOVERGEN:HBG105288 InParanoid:Q6DH44 KO:K13124 OrthoDB:EOG4ZCT4V
NextBio:20831145 ArrayExpress:Q6DH44 Uniprot:Q6DH44
Length = 315
Score = 143 (55.4 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 41/168 (24%), Positives = 80/168 (47%)
Query: 12 PYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS---ISNFDSTPPSPLQK 68
P L +T++ AV V+F+ DG L + ++K+L +S+S + + L
Sbjct: 14 PQHLWRTVDCQQGAVRAVRFNADGNYLLTCGSDKSLKLWSVSRGTLLKTYSGHGYEVLDA 73
Query: 69 FTGHEQG----ISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETI 124
++ S T+ LWDV + + L GH V C+ FN ++ ++S + + T+
Sbjct: 74 DGSYDNSQLCSCSSDKTVILWDVASGQVTRKLRGHAGKVNCVQFNEEATVMLSGSIDGTV 133
Query: 125 RIWDIKTGKC--LKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
R WD ++ + +++L D ++++ + ++T S DG R D
Sbjct: 134 RCWDTRSRRMEPIQILDESQDGISSLKVSEHE--LLTGSVDGRVRRYD 179
Score = 117 (46.2 bits), Expect = 0.00014, P = 0.00014
Identities = 46/180 (25%), Positives = 86/180 (47%)
Query: 3 SDRSLE--SFRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS--ISNF 58
SD+SL+ S TL +T +GH V S+D L S S++KT++ + ++S ++
Sbjct: 45 SDKSLKLWSVSRGTLLKTYSGHGYEVLDADGSYDNSQLCSCSSDKTVILWDVASGQVTRK 104
Query: 59 DSTPPSPLQKFTGHEQGISDLA-----TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSN 113
+ +E+ L+ T+R WD + I + + +
Sbjct: 105 LRGHAGKVNCVQFNEEATVMLSGSIDGTVRCWDTRSRRMEPIQILDESQDGISSLKVSEH 164
Query: 114 RIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDAST 173
+++ + + +R +D++ G+ L+V S P+T + F+RDG ++SS D R+LD ST
Sbjct: 165 ELLTGSVDGRVRRYDLRMGQ-LQVDYIGS-PITCVCFSRDGQCTLSSSLDSTVRLLDKST 222
Score = 71 (30.1 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 175 NGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKY 210
+G+ L +LD+T+RL + ST ++L YSG+ N Y
Sbjct: 202 DGQCTLSSSLDSTVRLLDKSTGEMLGEYSGHVNKGY 237
>WB|WBGene00003047 [details] [associations]
symbol:lis-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040025
"vulval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007100 "mitotic
centrosome separation" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] [GO:0051026 "chiasma
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IGI;IMP] [GO:0048489 "synaptic vesicle transport"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005938
"cell cortex" evidence=IDA] [GO:0005818 "aster" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0009792 GO:GO:0000132 GO:GO:0035046 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0000776 GO:GO:0051301
GO:GO:0007052 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0048489
GO:GO:0005874 GO:GO:0040025 GO:GO:0043652 GO:GO:0005818
GO:GO:0007018 GO:GO:0000777 GO:GO:0051026 GO:GO:0051932 EMBL:Z81113
GO:GO:0007100 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AF164430 PIR:T24399
RefSeq:NP_499755.1 UniGene:Cel.19492 ProteinModelPortal:Q9NDC9
SMR:Q9NDC9 IntAct:Q9NDC9 STRING:Q9NDC9 PaxDb:Q9NDC9
EnsemblMetazoa:T03F6.5 GeneID:176758 KEGG:cel:CELE_T03F6.5
UCSC:T03F6.5 CTD:36791 WormBase:T03F6.5 InParanoid:Q9NDC9
NextBio:893884 Uniprot:Q9NDC9
Length = 404
Score = 175 (66.7 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 64/272 (23%), Positives = 119/272 (43%)
Query: 16 TQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGHEQG 75
TQ L GH ++ V F ++ S S + T+ + + + T GH
Sbjct: 99 TQKLTGHRLPITRVIFHPLWTIMASCSEDATIKVWDYET-GQLERT-------LKGHTDA 150
Query: 76 ISDLA---------------TIRLWDV-PTATSLKTLIGHTNYVFCINFNPQSNRIVSDT 119
++D+A +I+LWD T LK+L GH + V + F P + ++S +
Sbjct: 151 VNDIAIDAAGKQLVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLPTGDFVLSAS 210
Query: 120 FNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFI 179
+ TI+ WDI TG C+ H+D V I + DGT+ ++S D + +T + K +
Sbjct: 211 RDHTIKQWDISTGYCVYTFRGHNDWVRMIRISNDGTLFASASLDQTVTVWSFATKSAKLV 270
Query: 180 LVGTLDNTLRLWNYSTRKILKTYSGYT---NSKYCISS--------TFSVTNGKYI---V 225
L ++ + ++ +G NS + + S +++ G + +
Sbjct: 271 LRDH-EHAVECVEWAPDTAYTNVTGQQPEGNSTHILFSGSRDRSIKAWNINTGDVLFTLL 329
Query: 226 SHRDPVISVASHPAKNIIASGALDNDRTMKIW 257
+H + V +A HP + S A +D+T+++W
Sbjct: 330 AHENWVRGLAFHPKGKYLISVA--DDKTLRVW 359
Score = 152 (58.6 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 57/226 (25%), Positives = 94/226 (41%)
Query: 15 LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLL------TYS-LSSISNFDSTPPSPLQ 67
L +TL GH AV+ + G+ L S S++ ++ TY L S+ + T S
Sbjct: 140 LERTLKGHTDAVNDIAIDAAGKQLVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTF 199
Query: 68 KFTGH-EQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRI 126
TG S TI+ WD+ T + T GH ++V I + S + ++T+ +
Sbjct: 200 LPTGDFVLSASRDHTIKQWDISTGYCVYTFRGHNDWVRMIRISNDGTLFASASLDQTVTV 259
Query: 127 WDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGK---FILVGT 183
W T VL H V +++ D T+ Y + P G + G+
Sbjct: 260 WSFATKSAKLVLRDHEHAVECVEWAPD-----TA-----YTNVTGQQPEGNSTHILFSGS 309
Query: 184 LDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRD 229
D +++ WN +T +L T + N + F GKY++S D
Sbjct: 310 RDRSIKAWNINTGDVLFTLLAHEN--WVRGLAFH-PKGKYLISVAD 352
Score = 150 (57.9 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 24/83 (28%), Positives = 50/83 (60%)
Query: 81 TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPA 140
+I+ W++ T L TL+ H N+V + F+P+ ++S ++T+R+W++ +C+K + A
Sbjct: 313 SIKAWNINTGDVLFTLLAHENWVRGLAFHPKGKYLISVADDKTLRVWELSAQRCMKAIEA 372
Query: 141 HSDPVTAIDFNRDGTMIVTSSYD 163
H V+ + F++ ++T S D
Sbjct: 373 HEHFVSTVAFHQTSPFVITGSVD 395
Score = 37 (18.1 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 4/14 (28%), Positives = 11/14 (78%)
Query: 178 FILVGTLDNTLRLW 191
F++ G++D + ++W
Sbjct: 388 FVITGSVDMSCKVW 401
>ASPGD|ASPL0000046644 [details] [associations]
symbol:AN2021 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001307 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AACD01000032 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR007111 PROSITE:PS50837 RefSeq:XP_659625.1
ProteinModelPortal:Q5BBQ9 EnsemblFungi:CADANIAT00008689
GeneID:2875333 KEGG:ani:AN2021.2 OMA:KQVLKGH OrthoDB:EOG412QDH
Uniprot:Q5BBQ9
Length = 1311
Score = 172 (65.6 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 77/252 (30%), Positives = 112/252 (44%)
Query: 15 LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLL----TYSL--SSISNF-DSTPPSPLQ 67
L +T GH V V S DGR + S S E L T L + S F S SP
Sbjct: 808 LEKTFVGHTGTVLSVAISSDGRQIVSGSIEAVKLWDAATGDLLKTLASGFAGSVAFSPDS 867
Query: 68 KFTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIW 127
+ G D I +WD T KTL H + I F+P ++V+ + + TI+ W
Sbjct: 868 RQIA--AGFKD-GKIFIWDA-AGTLQKTLERHPGAIMSIAFSPDVKQLVTCSTDSTIKRW 923
Query: 128 DIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNT 187
DI G + + HS VT + + DG +I + S D ++ DA+T + + L G LD
Sbjct: 924 DITIGGVQEAV-GHSKHVTTMVLSPDGKVIASGSADKTIKLWDAATGDLQKTLTGHLDTV 982
Query: 188 LRL-WNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVIS-VASHPAKNIIAS 245
++ ++ R+I+ S K ++T V N D V + VA P IAS
Sbjct: 983 EKVVFSLDNRQIVSCSSEAV--KIWDAATGKVQNS----FESDDVFTIVAVSPDGKHIAS 1036
Query: 246 GALDNDRTMKIW 257
G N R +K+W
Sbjct: 1037 GHC-NGR-IKLW 1046
Score = 162 (62.1 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 66/255 (25%), Positives = 121/255 (47%)
Query: 21 GHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPL---QK--FT-GHEQ 74
GH + V+ + S DG+++ S SA+KT+ + ++ + T L +K F+ + Q
Sbjct: 935 GHSKHVTTMVLSPDGKVIASGSADKTIKLWDAAT-GDLQKTLTGHLDTVEKVVFSLDNRQ 993
Query: 75 GIS-DLATIRLWDVPTATSLKTLIGHTNYVFCI-NFNPQSNRIVSDTFNETIRIWDIKTG 132
+S +++WD T + ++ VF I +P I S N I++WD+ TG
Sbjct: 994 IVSCSSEAVKIWDAATGKVQNSF--ESDDVFTIVAVSPDGKHIASGHCNGRIKLWDMATG 1051
Query: 133 KCLKVLPAHSDP----VTAIDFNRD-GTMIVTSSYDGLYRILDASTPNGKFILVGTLDNT 187
LK + + VT F+ I + GL +P+ K IL + D
Sbjct: 1052 SLLKTMAGYRSKFDSLVTTEVFDIQLQEAIFNTQITGL-----VFSPDAKLILSTSTDRA 1106
Query: 188 LRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVA-SHPAKNIIASG 246
++LW+ +T + K +++S I+ FS ++G + + + SVA S ++I A+
Sbjct: 1107 IKLWDAATGDLQKRLPCHSDS--IITDAFSRSSG-----YPNWIFSVAFSSDGQHIAAAS 1159
Query: 247 ALDNDRTMKIWTQEK 261
A D+T+++W+ EK
Sbjct: 1160 A---DKTIRVWSIEK 1171
Score = 140 (54.3 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 45/181 (24%), Positives = 85/181 (46%)
Query: 78 DLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKV 137
D I L+D T K L GH++ + F+ S ++V+ + + T+R+W+ TG K
Sbjct: 752 DSTCIMLFDTATGDLQKILKGHSHECSTMAFSSDSRQLVTGSVDCTVRLWNTTTGDLEKT 811
Query: 138 LPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYSTRK 197
H+ V ++ + DG IV+ S + + ++ DA+T + L ++ ++ +R+
Sbjct: 812 FVGHTGTVLSVAISSDGRQIVSGSIEAV-KLWDAATGDLLKTLASGFAGSVA-FSPDSRQ 869
Query: 198 ILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHP-AKNIIASGALDNDRTMKI 256
I +G+ + K I T K + H ++S+A P K ++ D T+K
Sbjct: 870 IA---AGFKDGKIFIWDAAG-TLQKTLERHPGAIMSIAFSPDVKQLVTCST---DSTIKR 922
Query: 257 W 257
W
Sbjct: 923 W 923
Score = 138 (53.6 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 61/250 (24%), Positives = 100/250 (40%)
Query: 15 LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS------ISNFDSTPPSPLQK 68
L + L GH S + FS D R L + S + T+ ++ ++ T S
Sbjct: 766 LQKILKGHSHECSTMAFSSDSRQLVTGSVDCTVRLWNTTTGDLEKTFVGHTGTVLSVAIS 825
Query: 69 FTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWD 128
G + + ++LWD T LKTL + + + F+P S +I + + I IWD
Sbjct: 826 SDGRQIVSGSIEAVKLWDAATGDLLKTLA--SGFAGSVAFSPDSRQIAAGFKDGKIFIWD 883
Query: 129 IKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTL 188
G K L H + +I F+ D +VT S D + D T G VG +
Sbjct: 884 A-AGTLQKTLERHPGAIMSIAFSPDVKQLVTCSTDSTIKRWDI-TIGGVQEAVGHSKHVT 941
Query: 189 RLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVA-SHPAKNIIASGA 247
+ K++ + S K ++T + K + H D V V S + I++ +
Sbjct: 942 TMVLSPDGKVIASGSADKTIKLWDAATGDLQ--KTLTGHLDTVEKVVFSLDNRQIVSCSS 999
Query: 248 LDNDRTMKIW 257
+KIW
Sbjct: 1000 ----EAVKIW 1005
Score = 134 (52.2 bits), Expect = 7.4e-08, Sum P(2) = 7.4e-08
Identities = 45/163 (27%), Positives = 74/163 (45%)
Query: 55 ISNFDSTPPSPLQKFTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNR 114
I +D S L+ G+ L T ++D+ L+ I +T + F+P +
Sbjct: 1043 IKLWDMATGSLLKTMAGYRSKFDSLVTTEVFDI----QLQEAIFNTQITGLV-FSPDAKL 1097
Query: 115 IVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDG-LYRILDAST 173
I+S + + I++WD TG K LP HSD + F+R +S Y ++ + A +
Sbjct: 1098 ILSTSTDRAIKLWDAATGDLQKRLPCHSDSIITDAFSR------SSGYPNWIFSV--AFS 1149
Query: 174 PNGKFILVGTLDNTLRLWNYSTRKILKT--YSGYTNSKYCISS 214
+G+ I + D T+R+W S K LK Y G + SS
Sbjct: 1150 SDGQHIAAASADKTIRVW--SIEKSLKASKYLGRAVGSHIKSS 1190
Score = 65 (27.9 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 16/35 (45%), Positives = 21/35 (60%)
Query: 8 ESFRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSS 42
+S+ P + QTL GH AV V FS DG+ + S S
Sbjct: 607 DSWTP--MIQTLTGHSEAVWRVAFSPDGKQIASGS 639
>DICTYBASE|DDB_G0275045 [details] [associations]
symbol:gpbB "Guanine nucleotide-binding protein
subunit beta-like protein" species:44689 "Dictyostelium discoideum"
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275045 GO:GO:0045335
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000013 KO:K14753 OMA:IRVWQVM
EMBL:U27537 RefSeq:XP_643839.1 ProteinModelPortal:P46800 SMR:P46800
IntAct:P46800 STRING:P46800 SWISS-2DPAGE:P46800 PRIDE:P46800
EnsemblProtists:DDB0185122 GeneID:8619886 KEGG:ddi:DDB_G0275045
Uniprot:P46800
Length = 329
Score = 173 (66.0 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 56/192 (29%), Positives = 92/192 (47%)
Query: 17 QTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS-ISN--FDSTPPSPLQ-KFTGH 72
++L GH V V SHDG+ S S + TL + ++ +S F + F+
Sbjct: 64 RSLKGHSHFVQDVVISHDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSD 123
Query: 73 EQGI---SDLATIRLWDVPTATSLK-TLIG---HTNYVFCINFNPQSNRIVSDTFNETIR 125
+ I S ATI++W+ T K TL G H ++V CI F+P + IVS +++ ++
Sbjct: 124 NRQIISGSRDATIKVWN--TLGECKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVK 181
Query: 126 IWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLD 185
IWDIK+ KC L H+ V + + DG++ + D + + S+ GK +
Sbjct: 182 IWDIKSFKCNHTLTDHTGYVNTVTISPDGSLCASGGKDTFACLWELSS--GKPLYKLEAR 239
Query: 186 NTLRLWNYSTRK 197
NT+ +S K
Sbjct: 240 NTINALAFSPNK 251
Score = 156 (60.0 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 50/178 (28%), Positives = 84/178 (47%)
Query: 13 YTLTQTLNGHLRAVSYVKFSHDGR-LLTSSSAEKTLLTYSLSSISNFDSTPPSPLQK-FT 70
Y +L GH V+ + S + + SSS +KT++ + L+ D+T P +
Sbjct: 11 YLEVGSLVGHNGFVTSIAVSPENPDTIISSSRDKTVMVWQLTPT---DATSPGKAHRSLK 67
Query: 71 GHEQGISDLA---------------TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRI 115
GH + D+ T+RLWD+ S + GHT V + F+ + +I
Sbjct: 68 GHSHFVQDVVISHDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSDNRQI 127
Query: 116 VSDTFNETIRIWDIKTGKCLKVL--P-AHSDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
+S + + TI++W+ G+C L P AH D V+ I F+ + IV+ S+D +I D
Sbjct: 128 ISGSRDATIKVWNT-LGECKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIWD 184
Score = 122 (48.0 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 45/178 (25%), Positives = 80/178 (44%)
Query: 81 TIRLWDV-PT-ATSL----KTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKC 134
T+ +W + PT ATS ++L GH+++V + + +S +++ T+R+WDI G
Sbjct: 45 TVMVWQLTPTDATSPGKAHRSLKGHSHFVQDVVISHDGQFALSGSWDNTLRLWDITKGVS 104
Query: 135 LKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYS 194
++ H+ V ++ F+ D I++ S D ++ + + KF L G + W
Sbjct: 105 TRLFKGHTQDVMSVAFSSDNRQIISGSRDATIKVWN-TLGECKFTLEGP--EAHQDWVSC 161
Query: 195 TRKILKT---YSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALD 249
R T SG ++K I S + H V +V P ++ ASG D
Sbjct: 162 IRFSPNTPTIVSGSWDNKVKIWDIKSFKCNHTLTDHTGYVNTVTISPDGSLCASGGKD 219
Score = 121 (47.7 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 42/150 (28%), Positives = 68/150 (45%)
Query: 88 PTATSLK--TLIGHTNYVFCINFNPQS-NRIVSDTFNETIRIWDIKTGKCLKVLPAHSDP 144
P T L+ +L+GH +V I +P++ + I+S + ++T+ +W + AH
Sbjct: 7 PQVTYLEVGSLVGHNGFVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKAHRSL 66
Query: 145 VTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSG 204
F +D V S+DG +F L G+ DNTLRLW+ + + + G
Sbjct: 67 KGHSHFVQD----VVISHDG------------QFALSGSWDNTLRLWDITKGVSTRLFKG 110
Query: 205 YTNSKYCISSTFSVTNGKYIVSHRDPVISV 234
+T +S FS N + I RD I V
Sbjct: 111 HTQD--VMSVAFSSDNRQIISGSRDATIKV 138
Score = 112 (44.5 bits), Expect = 9.6e-05, Sum P(2) = 9.6e-05
Identities = 35/145 (24%), Positives = 63/145 (43%)
Query: 16 TQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQ------KF 69
T+ GH + V V FS D R + S S + T+ ++ F P Q +F
Sbjct: 105 TRLFKGHTQDVMSVAFSSDNRQIISGSRDATIKVWNTLGECKFTLEGPEAHQDWVSCIRF 164
Query: 70 TGHEQGISDLA---TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRI 126
+ + I + +++WD+ + TL HT YV + +P + S + +
Sbjct: 165 SPNTPTIVSGSWDNKVKIWDIKSFKCNHTLTDHTGYVNTVTISPDGSLCASGGKDTFACL 224
Query: 127 WDIKTGKCLKVLPAHSDPVTAIDFN 151
W++ +GK L L A + + A+ F+
Sbjct: 225 WELSSGKPLYKLEARNT-INALAFS 248
Score = 44 (20.5 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 9/29 (31%), Positives = 18/29 (62%)
Query: 171 ASTPNGKFILVGTLDNTLRLWNYSTRKIL 199
A +PN K+ L D+ + +W+ T+++L
Sbjct: 246 AFSPN-KYWLSAATDDKIIIWDLLTKQVL 273
Score = 40 (19.1 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 7/27 (25%), Positives = 17/27 (62%)
Query: 147 AIDFNRDGTMIVTSSYDGLYRILDAST 173
++ ++ DG+++ DGL R+ +S+
Sbjct: 302 SLAWSADGSVLYAGYNDGLIRVYKSSS 328
Score = 36 (17.7 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 9/27 (33%), Positives = 12/27 (44%)
Query: 173 TPNGKFILVGTLDNTLRLWNYSTRKIL 199
+P+G G D LW S+ K L
Sbjct: 207 SPDGSLCASGGKDTFACLWELSSGKPL 233
>MGI|MGI:2429770 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:2429770 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
EMBL:AL603745 GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855
OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154 CTD:54475
HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS EMBL:BC018399 IPI:IPI00124677
RefSeq:NP_663406.2 UniGene:Mm.29176 ProteinModelPortal:Q8VEJ4
SMR:Q8VEJ4 STRING:Q8VEJ4 PhosphoSite:Q8VEJ4 PaxDb:Q8VEJ4
PRIDE:Q8VEJ4 Ensembl:ENSMUST00000103213 GeneID:217011
KEGG:mmu:217011 InParanoid:B1ARD5 NextBio:375506 Bgee:Q8VEJ4
CleanEx:MM_NLE1 Genevestigator:Q8VEJ4 GermOnline:ENSMUSG00000020692
Uniprot:Q8VEJ4
Length = 485
Score = 160 (61.4 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 56/208 (26%), Positives = 95/208 (45%)
Query: 2 SSDRSLESFRPY--TLTQTLNGHLRAVSYVKFSHDGRLLTSS--SAEKTLLTYSLS-SIS 56
S DR+++ +R + L +TL GH V+ + S D L T + AE T+ L S+
Sbjct: 264 SQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEATVNAQDLQGSLK 323
Query: 57 NFDSTPPSP--LQKFTGHEQGIS--DLATIRLWD-VPTATSLKTLIGHTNYVFCINFNPQ 111
S L + G E+ +S D T+ LW L + GH + + F+P
Sbjct: 324 ELKERASSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPD 383
Query: 112 SNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDA 171
S + S +F+++I++WD +TGK L L H V I ++ D ++V+ S D ++ D
Sbjct: 384 SRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDV 443
Query: 172 STPNGKFILVGTLDNTLRL-WNYSTRKI 198
L G D + W+ +++
Sbjct: 444 KAQKLATDLPGHADEVYAVDWSPDGQRV 471
Score = 155 (59.6 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 45/171 (26%), Positives = 84/171 (49%)
Query: 16 TQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSIS-NFD-----------STPP 63
T +L GH AV V FS G+ L S S + T+ + LS+ + +F S P
Sbjct: 107 TSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSP 166
Query: 64 SPLQKFTGHEQGISDLATIRLWDVPTATSL-KTLIGHTNYVFCINF-----NPQSNRIVS 117
+ +G + G + LWD T + +TL GH+ ++ +++ NP+ + S
Sbjct: 167 DGKKLASGCKNG-----QVLLWDPSTGLQVGRTLTGHSKWITGLSWEPLHMNPECRYVAS 221
Query: 118 DTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRI 168
+ + ++R+WD G+C ++L H+ VT + + DG ++ ++S D ++
Sbjct: 222 SSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDG-LLYSASQDRTIKV 271
Score = 155 (59.6 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 31/88 (35%), Positives = 50/88 (56%)
Query: 81 TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPA 140
+I+LWD T L +L GH V+ I ++ S +VS + + T+++WD+K K LP
Sbjct: 395 SIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLATDLPG 454
Query: 141 HSDPVTAIDFNRDGTMIVTSSYDGLYRI 168
H+D V A+D++ DG + + D RI
Sbjct: 455 HADEVYAVDWSPDGQRVASGGKDKCLRI 482
Score = 140 (54.3 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 40/135 (29%), Positives = 63/135 (46%)
Query: 64 SPLQKFTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNET 123
SP K+ G D T+R WD+ T T T GH ++V I+++P ++ S N
Sbjct: 123 SPTGKYLA--SGSGD-TTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLASGCKNGQ 179
Query: 124 IRIWDIKTGKCL-KVLPAHSDPVTAIDF-----NRDGTMIVTSSYDGLYRILDASTPNGK 177
+ +WD TG + + L HS +T + + N + + +SS DG R+ D + +
Sbjct: 180 VLLWDPSTGLQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWDTTAGRCE 239
Query: 178 FILVG-TLDNTLRLW 191
IL G T T W
Sbjct: 240 RILTGHTQSVTCLRW 254
Score = 114 (45.2 bits), Expect = 0.00065, P = 0.00065
Identities = 32/132 (24%), Positives = 62/132 (46%)
Query: 81 TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPA 140
T+R WD+ T T T GH ++V I+++P ++ S N + +WD TG L+V
Sbjct: 137 TVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLASGCKNGQVLLWDPSTG--LQV--- 191
Query: 141 HSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYSTRKILK 200
+T I S++ L+ P +++ + D ++R+W+ + + +
Sbjct: 192 -GRTLTG-----HSKWITGLSWEPLHM-----NPECRYVASSSKDGSVRVWDTTAGRCER 240
Query: 201 TYSGYTNSKYCI 212
+G+T S C+
Sbjct: 241 ILTGHTQSVTCL 252
Score = 97 (39.2 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 26/94 (27%), Positives = 43/94 (45%)
Query: 80 ATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLP 139
A R+ V TS +L GH+ V + F+P + S + + T+R WD+ T
Sbjct: 96 AVFRVRAVTRCTS--SLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCK 153
Query: 140 AHSDPVTAIDFNRDGTMIVTSSYDGLYRILDAST 173
H V +I ++ DG + + +G + D ST
Sbjct: 154 GHRHWVLSISWSPDGKKLASGCKNGQVLLWDPST 187
Score = 62 (26.9 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 11/48 (22%), Positives = 28/48 (58%)
Query: 165 LYRILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCI 212
+Y+I A + + + ++ G+ D+TL++W+ +K+ G+ + Y +
Sbjct: 417 VYQI--AWSADSRLLVSGSSDSTLKVWDVKAQKLATDLPGHADEVYAV 462
Score = 58 (25.5 bits), Expect = 7.1e-11, Sum P(2) = 7.1e-11
Identities = 10/41 (24%), Positives = 23/41 (56%)
Query: 173 TPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCIS 213
+P+ + + + D +++LW+ T K L + G+ + Y I+
Sbjct: 381 SPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIA 421
Score = 44 (20.5 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 163 DGLYRILDASTPNGKFILVGTLDNTLRLW 191
D +Y + D S P+G+ + G D LR+W
Sbjct: 457 DEVYAV-DWS-PDGQRVASGGKDKCLRIW 483
>DICTYBASE|DDB_G0287337 [details] [associations]
symbol:taf5 "TFIID subunit" species:44689
"Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005669 "transcription factor TFIID complex"
evidence=ISS] [GO:0000124 "SAGA complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0287337 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016568 GenomeReviews:CM000154_GR GO:GO:0006366
EMBL:AAFI02000100 GO:GO:0000124 GO:GO:0003743 GO:GO:0005669
KO:K03130 OMA:PNINYLA RefSeq:XP_637246.1 ProteinModelPortal:Q54KH7
STRING:Q54KH7 EnsemblProtists:DDB0231003 GeneID:8626077
KEGG:ddi:DDB_G0287337 InParanoid:Q54KH7 ProtClustDB:CLSZ2497147
Uniprot:Q54KH7
Length = 948
Score = 179 (68.1 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 47/179 (26%), Positives = 83/179 (46%)
Query: 2 SSDRSLESFRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNF--- 58
SS L+ + + +T GH V FS D + L S S + T +S+ ++SN
Sbjct: 658 SSSNKLQKQQKESEFKTFLGHSGPVYGCSFSPDSQYLLSCSEDTTARLWSMETMSNLVCY 717
Query: 59 --DSTP--PSPLQKFTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNR 114
+ P F + S T RLW + L+ GH + + F+P N
Sbjct: 718 KGHNFPVWDVSFSPFGFYFATASHDRTARLWTTNHISPLRIFTGHLSDCNTVRFHPNINY 777
Query: 115 IVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDAST 173
+ + + +++ R+W+I+TGKC+++ H P+ + F+ DG ++ T+ D + D ST
Sbjct: 778 LATGSNDKSARLWEIQTGKCVRIFMGHRAPIYTVAFSPDGRLLATAGEDTSVILWDLST 836
Score = 158 (60.7 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 45/165 (27%), Positives = 81/165 (49%)
Query: 21 GHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGH-------- 72
GH V V FS G ++S ++T ++ + IS PL+ FTGH
Sbjct: 719 GHNFPVWDVSFSPFGFYFATASHDRTARLWTTNHIS--------PLRIFTGHLSDCNTVR 770
Query: 73 -EQGISDLAT------IRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIR 125
I+ LAT RLW++ T ++ +GH ++ + F+P + + + ++
Sbjct: 771 FHPNINYLATGSNDKSARLWEIQTGKCVRIFMGHRAPIYTVAFSPDGRLLATAGEDTSVI 830
Query: 126 IWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
+WD+ TGK +K + H+ V ++DF+ DG+++ + S D R+ D
Sbjct: 831 LWDLSTGKKVKKMDGHTKCVYSLDFSCDGSILASGSSDCTVRLWD 875
>RGD|1308228 [details] [associations]
symbol:Wdr61 "WD repeat domain 61" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=ISO;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISO;ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISO;ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISO;ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISO;ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0055087 "Ski complex" evidence=ISO;ISS]
[GO:0080182 "histone H3-K4 trimethylation" evidence=ISO;ISS]
[GO:2001162 "positive regulation of histone H3-K79 methylation"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1308228 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0080182
GO:GO:0016593 GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW
EMBL:BC098059 IPI:IPI00366523 RefSeq:NP_001020914.1 UniGene:Rn.3698
ProteinModelPortal:Q4V7A0 STRING:Q4V7A0 PRIDE:Q4V7A0 GeneID:363064
KEGG:rno:363064 UCSC:RGD:1308228 InParanoid:Q4V7A0 NextBio:682300
ArrayExpress:Q4V7A0 Genevestigator:Q4V7A0
GermOnline:ENSRNOG00000012803 Uniprot:Q4V7A0
Length = 305
Score = 158 (60.7 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
Identities = 48/177 (27%), Positives = 77/177 (43%)
Query: 15 LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFT-GHE 73
L +L GH V V SH + SSS + + + L + S P+ +T
Sbjct: 56 LQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQMKSIDAGPVDAWTLAFS 115
Query: 74 QGISDLAT------IRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIW 127
LAT + ++ V + +L ++ I ++P + S + I I+
Sbjct: 116 PDSQHLATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIF 175
Query: 128 DIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTL 184
DI TGK L L H+ P+ ++ F+ D ++VT+S DG +I D N L GTL
Sbjct: 176 DIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHAN----LAGTL 228
Score = 144 (55.7 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 36/149 (24%), Positives = 72/149 (48%)
Query: 29 VKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTP--PSPLQK--FTGHEQGI---SDLAT 81
+ +S DG+ L S + + + + +++ + P++ F+ Q + SD
Sbjct: 154 IAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGY 213
Query: 82 IRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAH 141
I+++DV A TL GH ++V + F P VS + ++++++WD+ T C+ H
Sbjct: 214 IKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCIHTFFDH 273
Query: 142 SDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
D V + +N +G+ IV+ D + D
Sbjct: 274 QDQVWGVKYNGNGSKIVSVGDDQEIHVYD 302
Score = 119 (46.9 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 37/125 (29%), Positives = 58/125 (46%)
Query: 50 YSLSSISNFD-STPPSPLQKFTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINF 108
YSL + F S SP K+ G D I ++D+ T L TL GH + + F
Sbjct: 142 YSLDTRGKFILSIAYSPDGKYLA--SGAID-GIINIFDIATGKLLHTLEGHAMPIRSLTF 198
Query: 109 NPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRI 168
+P S +V+ + + I+I+D++ L H+ V + F D T V+SS D ++
Sbjct: 199 SPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKV 258
Query: 169 LDAST 173
D T
Sbjct: 259 WDVGT 263
Score = 48 (22.0 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
Identities = 13/59 (22%), Positives = 27/59 (45%)
Query: 171 ASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRD 229
A P+ + + D ++++W+ TR + T+ + + + + NG IVS D
Sbjct: 239 AFCPDDTHFVSSSSDKSVKVWDVGTRTCIHTFFDHQDQVWGVKYN---GNGSKIVSVGD 294
>UNIPROTKB|Q8IU52 [details] [associations]
symbol:TUWD12 "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 HOVERGEN:HBG057502
UniGene:Hs.604487 HGNC:HGNC:30836 HSSP:Q02793 EMBL:AB053266
EMBL:AB053276 IPI:IPI00796655 SMR:Q8IU52 STRING:Q8IU52
Ensembl:ENST00000393179 Uniprot:Q8IU52
Length = 348
Score = 172 (65.6 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 43/153 (28%), Positives = 77/153 (50%)
Query: 18 TLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS---ISNF-DSTPPSPLQKFTGHE 73
+L H V KFS DGRL+ S S +KT+ + ++ ++NF DS + F
Sbjct: 9 SLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSG 68
Query: 74 QGISDLA---TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIK 130
I+ T+++WDV L+ H+ V CI+F+P N +++ + + T++I D+
Sbjct: 69 TCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLL 128
Query: 131 TGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYD 163
G+ + L H+ PV + F++ G + + D
Sbjct: 129 EGRLIYTLQGHTGPVFTVSFSKGGELFASGGAD 161
Score = 152 (58.6 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 28/94 (29%), Positives = 48/94 (51%)
Query: 77 SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLK 136
S+ TI++WD + + ++FNP I S ++T+++WD++ K L+
Sbjct: 33 SEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQ 92
Query: 137 VLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
HS V I F+ G ++T+S DG +ILD
Sbjct: 93 HYQVHSGGVNCISFHPSGNYLITASSDGTLKILD 126
Score = 117 (46.2 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 25/78 (32%), Positives = 40/78 (51%)
Query: 93 LKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNR 152
L +L HT++V C F+P IVS + ++TI+IWD +C+ +DFN
Sbjct: 7 LYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNP 66
Query: 153 DGTMIVTSSYDGLYRILD 170
GT I ++ D ++ D
Sbjct: 67 SGTCIASAGSDQTVKVWD 84
Score = 59 (25.8 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 9/40 (22%), Positives = 23/40 (57%)
Query: 174 PNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCIS 213
P+G +++ + D TL++ + +++ T G+T + +S
Sbjct: 108 PSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVS 147
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 175 (66.7 bits), Expect = 4.6e-11, P = 4.6e-11
Identities = 50/179 (27%), Positives = 81/179 (45%)
Query: 19 LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSIS--------NFD--STPPSPLQK 68
L GH V FS D L SSS + T+ +SL + + N+ T SP
Sbjct: 299 LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGY 358
Query: 69 FT---GHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIR 125
+ GH++ RLW L+ GH V C F+P SN + + + + T+R
Sbjct: 359 YFVSGGHDR------VARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVR 412
Query: 126 IWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTL 184
+WD+ G C+++ H P+ ++ F+ +G + T + DG + D G ++VG L
Sbjct: 413 LWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDI----GHGLMVGEL 467
Score = 169 (64.5 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 63/244 (25%), Positives = 105/244 (43%)
Query: 19 LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGHEQGISD 78
LN + + ++ V + D L+ A+ T+ +S++ S + E SD
Sbjct: 226 LNAYQQGLTAVDVTDDSSLIAGGFADSTVRVWSVTP-KKLRSVKQAADLSLIDKE---SD 281
Query: 79 LATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVL 138
R+ D TA+ LK L GH+ V+ +F+P N ++S + + T+R+W ++T CL
Sbjct: 282 DVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGY 341
Query: 139 PAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYSTRKI 198
H+ PV F+ G V+ +D + R+ I G L + N TR
Sbjct: 342 KGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADV----N-CTR-- 394
Query: 199 LKTYSGY--TNSKYCISSTFSVTNGKYI---VSHRDPVISVASHPAKNIIASGALDNDRT 253
S Y T S + V NG + H+ P+ S+ P +A+GA D R
Sbjct: 395 FHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDG-RV 453
Query: 254 MKIW 257
+ +W
Sbjct: 454 L-LW 456
Score = 153 (58.9 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 34/116 (29%), Positives = 58/116 (50%)
Query: 75 GISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKC 134
G +D T+RLWDV ++ GH + + F+P + + + + +WDI G
Sbjct: 405 GSAD-RTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLM 463
Query: 135 LKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDA-------STPNGKFILVGT 183
+ L H+D V ++ F+RDG ++ + S D R+ DA T N + +L+GT
Sbjct: 464 VGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVKAFEDLETDNSQELLLGT 519
Score = 137 (53.3 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 48/186 (25%), Positives = 76/186 (40%)
Query: 77 SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLK 136
S+ T+RLW + T T L GH V+ F+P VS + R+W + L+
Sbjct: 322 SEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLR 381
Query: 137 VLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYSTR 196
+ H V F+ + + T S D R+ D N I G L
Sbjct: 382 IFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNG 441
Query: 197 KILKTYSGYTNSKYCISST-FSVTNGKYIVSHRDPVISVASHPAKNIIASGALDNDRTMK 255
+ L T G T+ + + + G+ + H D V S+ I+ASG++DN T++
Sbjct: 442 RFLAT--GATDGRVLLWDIGHGLMVGE-LKGHTDTVCSLRFSRDGEILASGSMDN--TVR 496
Query: 256 IWTQEK 261
+W K
Sbjct: 497 LWDAVK 502
>RGD|1309121 [details] [associations]
symbol:Fbxw11 "F-box and WD repeat domain containing 11"
species:10116 "Rattus norvegicus" [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006470
"protein dephosphorylation" evidence=ISO] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=ISO] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0031648 "protein destabilization" evidence=ISO] [GO:0042347
"negative regulation of NF-kappaB import into nucleus"
evidence=ISO] [GO:0042753 "positive regulation of circadian rhythm"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045862 "positive regulation
of proteolysis" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 RGD:1309121 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 IPI:IPI00368750 Ensembl:ENSRNOT00000005874
UCSC:RGD:1309121 ArrayExpress:F1M7I4 Uniprot:F1M7I4
Length = 493
Score = 174 (66.3 bits), Expect = 5.4e-11, P = 5.4e-11
Identities = 53/184 (28%), Positives = 92/184 (50%)
Query: 2 SSDRSLESFRPYT--LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFD 59
SSD ++ + T + TL H AV +++FS+ L+ + S ++++ + ++S + D
Sbjct: 248 SSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG--LMVTCSKDRSIAVWDMASAT--D 303
Query: 60 STPPSPLQKFTGHEQGIS--DL-----------ATIRLWDVPTATSLKTLIGHTNYVFCI 106
T L GH ++ D TI++W T ++TL GH + C+
Sbjct: 304 ITLRRVL---VGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACL 360
Query: 107 NFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLY 166
+ + +VS + + TIR+WDI+ G CL+VL H + V I F D IV+ +YDG
Sbjct: 361 QY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKI 416
Query: 167 RILD 170
++ D
Sbjct: 417 KVWD 420
Score = 171 (65.3 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 62/196 (31%), Positives = 91/196 (46%)
Query: 2 SSDRSLE-----SFRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSIS 56
S DRS+ S TL + L GH AV+ V F D + + S+S ++T+ +S S+
Sbjct: 288 SKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCE 345
Query: 57 NFDSTPPSPLQKFTGHEQGISDLA-------------TIRLWDVPTATSLKTLIGHTNYV 103
F T GH++GI+ L TIRLWD+ L+ L GH V
Sbjct: 346 -FVRT-------LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV 397
Query: 104 FCINFNPQSNRIVSDTFNETIRIWDIKTGK---------CLKVLPAHSDPVTAIDFNRDG 154
CI F+ + RIVS ++ I++WD++ CL+ L HS V + F D
Sbjct: 398 RCIRFD--NKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DE 453
Query: 155 TMIVTSSYDGLYRILD 170
I++SS+D I D
Sbjct: 454 FQIISSSHDDTILIWD 469
Score = 158 (60.7 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 50/189 (26%), Positives = 94/189 (49%)
Query: 75 GISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKC 134
G+ D +I++WD + LK L GHT V C+ ++ + IV+ + + T+R+WD+ TG+
Sbjct: 207 GLRD-NSIKIWDKSSLECLKVLTGHTGSVLCLQYDERV--IVTGSSDSTVRVWDVNTGEV 263
Query: 135 LKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNG---KFILVGTLDNTLRLW 191
L L H++ V + F+ +G M VT S D + D ++ + +LVG + +
Sbjct: 264 LNTLIHHNEAVLHLRFS-NGLM-VTCSKDRSIAVWDMASATDITLRRVLVGHRA-AVNVV 320
Query: 192 NYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDND 251
++ + I+ SG K +ST + + H+ + + ++ SG+ DN
Sbjct: 321 DFDDKYIVSA-SGDRTIKVWSTSTCEFV--RTLNGHKRGIACLQYRD--RLVVSGSSDN- 374
Query: 252 RTMKIWTQE 260
T+++W E
Sbjct: 375 -TIRLWDIE 382
Score = 154 (59.3 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 44/157 (28%), Positives = 81/157 (51%)
Query: 103 VFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSY 162
V+C+ ++ ++I+S + +I+IWD + +CLKVL H+ V + + D +IVT S
Sbjct: 194 VYCLQYD--DDKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQY--DERVIVTGSS 249
Query: 163 DGLYRILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGK 222
D R+ D +T L+ + L L +S ++ + + + ++S +T +
Sbjct: 250 DSTVRVWDVNTGEVLNTLIHHNEAVLHL-RFSNGLMVTCSKDRSIAVWDMASATDITLRR 308
Query: 223 YIVSHRDPVISVASHPAKNII-ASGALDNDRTMKIWT 258
+V HR ++V K I+ ASG DRT+K+W+
Sbjct: 309 VLVGHR-AAVNVVDFDDKYIVSASG----DRTIKVWS 340
>POMBASE|SPAC57A10.05c [details] [associations]
symbol:pof1 "F-box/WD repeat protein protein Pof1"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0030674 "protein binding, bridging" evidence=IPI]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IPI] [GO:0071276 "cellular
response to cadmium ion" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 PomBase:SPAC57A10.05c
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071276 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0042787
HOGENOM:HOG000166480 KO:K10259 OrthoDB:EOG496313 EMBL:AB032410
PIR:T38932 RefSeq:NP_593310.1 ProteinModelPortal:P87053
IntAct:P87053 STRING:P87053 EnsemblFungi:SPAC57A10.05c.1
GeneID:2542914 KEGG:spo:SPAC57A10.05c NextBio:20803951
Uniprot:P87053
Length = 605
Score = 175 (66.7 bits), Expect = 5.6e-11, P = 5.6e-11
Identities = 60/186 (32%), Positives = 99/186 (53%)
Query: 80 ATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLP 139
ATIRLW++ T + L GH++ V C+ F+ +++S + ++TIRIW+ +T +C+ +L
Sbjct: 293 ATIRLWNLATFQQVALLEGHSSGVTCLQFD--QCKLISGSMDKTIRIWNYRTSECISILH 350
Query: 140 AHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFI-LVGTLD--NTLRLWNYSTR 196
H+D V + F D T++V+ S D ++ S GK I L G N++R+ R
Sbjct: 351 GHTDSVLCLTF--DSTLLVSGSADCTVKLWHFS--GGKRITLRGHTGPVNSVRI--IRDR 404
Query: 197 KILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDNDRTMKI 256
++ SG +S I S + T +H PV S+A A + + S +LD T+K
Sbjct: 405 GLV--LSGSDDSTIKIWSLETNTCLHTFSAHIGPVQSLAL--ADSRLFSCSLDG--TIKQ 458
Query: 257 WTQEKE 262
W EK+
Sbjct: 459 WDIEKK 464
Score = 154 (59.3 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 52/167 (31%), Positives = 81/167 (48%)
Query: 96 LIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGT 155
L GH++ V C+ N + S +++ TIR+W++ T + + +L HS VT + F D
Sbjct: 269 LSGHSDGVMCLQL--VRNILASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQF--DQC 324
Query: 156 MIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISST 215
+++ S D RI + T IL G D+ L L ST + SG S C
Sbjct: 325 KLISGSMDKTIRIWNYRTSECISILHGHTDSVLCLTFDSTLLV----SG---SADCTVKL 377
Query: 216 FSVTNGKYIV--SHRDPVISVASHPAKNIIASGALDNDRTMKIWTQE 260
+ + GK I H PV SV + ++ SG+ +D T+KIW+ E
Sbjct: 378 WHFSGGKRITLRGHTGPVNSVRIIRDRGLVLSGS--DDSTIKIWSLE 422
Score = 143 (55.4 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 54/207 (26%), Positives = 99/207 (47%)
Query: 18 TLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS---ISNFDSTPPSPLQKFTGHEQ 74
TL GH V+ V+ D L+ S S + T+ +SL + + F S P+Q +
Sbjct: 387 TLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHTF-SAHIGPVQSLALADS 445
Query: 75 GISDLA---TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKT 131
+ + TI+ WD+ + TL GH V+ I + R++S + +++W+
Sbjct: 446 RLFSCSLDGTIKQWDIEKKKCVHTLFGHIEGVWEIAADHL--RLISGAHDGVVKVWE--A 501
Query: 132 GKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDG-LYRILDASTPNGKFILVGTLD-NTL- 188
+C+ L HS+PVT++ D +V+ S DG +Y L + PN + ++ ++L
Sbjct: 502 CECVHTLKNHSEPVTSVALG-D-CEVVSGSEDGKIYLWLFNNAPNESPVSTQSVPISSLN 559
Query: 189 -RLWNYSTRKILKTYSGYTNSKYCISS 214
+ N S ++ L + Y++S IS+
Sbjct: 560 GQRSNSSVQRALSSVPNYSSSLSNIST 586
Score = 137 (53.3 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 48/179 (26%), Positives = 86/179 (48%)
Query: 2 SSDRSLE--SFRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS---IS 56
S D+++ ++R L+GH +V + F D LL S SA+ T+ + S I+
Sbjct: 330 SMDKTIRIWNYRTSECISILHGHTDSVLCLTF--DSTLLVSGSADCTVKLWHFSGGKRIT 387
Query: 57 NFDSTPPSPLQKFTGHEQGI----SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQS 112
T P + ++G+ SD +TI++W + T T L T H V +
Sbjct: 388 LRGHTGPVNSVRII-RDRGLVLSGSDDSTIKIWSLETNTCLHTFSAHIGPVQSLAL--AD 444
Query: 113 NRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDA 171
+R+ S + + TI+ WDI+ KC+ L H + V I D +++ ++DG+ ++ +A
Sbjct: 445 SRLFSCSLDGTIKQWDIEKKKCVHTLFGHIEGVWEIA--ADHLRLISGAHDGVVKVWEA 501
>UNIPROTKB|F1S8U2 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:CU469143 EMBL:CT737224
EMBL:CT737143 Ensembl:ENSSSCT00000011555 Uniprot:F1S8U2
Length = 506
Score = 174 (66.3 bits), Expect = 5.7e-11, P = 5.7e-11
Identities = 53/184 (28%), Positives = 94/184 (51%)
Query: 2 SSDRSLESFRPYT--LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFD 59
SSD ++ + T + TL H AV +++F++ G ++T S ++++ + ++S + D
Sbjct: 261 SSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNN-GMMVTCSK-DRSIAVWDMASPT--D 316
Query: 60 STPPSPLQKFTGHEQGIS--DL-----------ATIRLWDVPTATSLKTLIGHTNYVFCI 106
T L GH ++ D TI++W+ T ++TL GH + C+
Sbjct: 317 ITLRRVL---VGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACL 373
Query: 107 NFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLY 166
+ + +VS + + TIR+WDI+ G CL+VL H + V I F D IV+ +YDG
Sbjct: 374 QY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKI 429
Query: 167 RILD 170
++ D
Sbjct: 430 KVWD 433
Score = 167 (63.8 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 51/189 (26%), Positives = 94/189 (49%)
Query: 75 GISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKC 134
G+ D TI++WD T + L GHT V C+ ++ + I++ + + T+R+WD+ TG+
Sbjct: 220 GLRD-NTIKIWDKSTLECKRILTGHTGSVLCLQYDERV--IITGSSDSTVRVWDVNTGEM 276
Query: 135 LKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNG---KFILVGTLDNTLRLW 191
L L H + V + FN +G M+VT S D + D ++P + +LVG + +
Sbjct: 277 LNTLIHHCEAVLHLRFN-NG-MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA-AVNVV 333
Query: 192 NYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDND 251
++ + I+ SG K +ST + + H+ + + ++ SG+ DN
Sbjct: 334 DFDDKYIVSA-SGDRTIKVWNTSTCEFV--RTLNGHKRGIACLQYRD--RLVVSGSSDN- 387
Query: 252 RTMKIWTQE 260
T+++W E
Sbjct: 388 -TIRLWDIE 395
Score = 164 (62.8 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 62/189 (32%), Positives = 90/189 (47%)
Query: 2 SSDRSL---ESFRP--YTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSIS 56
S DRS+ + P TL + L GH AV+ V F D + + S+S ++T+ ++ S+
Sbjct: 301 SKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCE 358
Query: 57 -----NFDSTPPSPLQ-KFTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNP 110
N + LQ + G SD TIRLWD+ L+ L GH V CI F+
Sbjct: 359 FVRTLNGHKRGIACLQYRDRLVVSGSSD-NTIRLWDIECGACLRVLEGHEELVRCIRFD- 416
Query: 111 QSNRIVSDTFNETIRIWDI--------KTGK-CLKVLPAHSDPVTAIDFNRDGTMIVTSS 161
+ RIVS ++ I++WD+ G CL+ L HS V + F D IV+SS
Sbjct: 417 -NKRIVSGAYDGKIKVWDLIAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSS 473
Query: 162 YDGLYRILD 170
+D I D
Sbjct: 474 HDDTILIWD 482
Score = 153 (58.9 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 43/156 (27%), Positives = 79/156 (50%)
Query: 103 VFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSY 162
V+C+ ++ Q +IVS + TI+IWD T +C ++L H+ V + + D +I+T S
Sbjct: 207 VYCLQYDDQ--KIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQY--DERVIITGSS 262
Query: 163 DGLYRILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGK 222
D R+ D +T L+ + L L ++ ++ + + + ++S +T +
Sbjct: 263 DSTVRVWDVNTGEMLNTLIHHCEAVLHL-RFNNGMMVTCSKDRSIAVWDMASPTDITLRR 321
Query: 223 YIVSHRDPVISVASHPAKNII-ASGALDNDRTMKIW 257
+V HR ++V K I+ ASG DRT+K+W
Sbjct: 322 VLVGHR-AAVNVVDFDDKYIVSASG----DRTIKVW 352
>UNIPROTKB|J9P544 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:J9P544 Ensembl:ENSCAFT00000045166 Uniprot:J9P544
Length = 510
Score = 174 (66.3 bits), Expect = 5.7e-11, P = 5.7e-11
Identities = 53/184 (28%), Positives = 92/184 (50%)
Query: 2 SSDRSLESFRPYT--LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFD 59
SSD ++ + T + TL H AV +++FS+ L+ + S ++++ + ++S + D
Sbjct: 265 SSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG--LMVTCSKDRSIAVWDMASAT--D 320
Query: 60 STPPSPLQKFTGHEQGIS--DL-----------ATIRLWDVPTATSLKTLIGHTNYVFCI 106
T L GH ++ D TI++W T ++TL GH + C+
Sbjct: 321 ITLRRVL---VGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACL 377
Query: 107 NFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLY 166
+ + +VS + + TIR+WDI+ G CL+VL H + V I F D IV+ +YDG
Sbjct: 378 QY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKI 433
Query: 167 RILD 170
++ D
Sbjct: 434 KVWD 437
Score = 171 (65.3 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 62/196 (31%), Positives = 91/196 (46%)
Query: 2 SSDRSLE-----SFRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSIS 56
S DRS+ S TL + L GH AV+ V F D + + S+S ++T+ +S S+
Sbjct: 305 SKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCE 362
Query: 57 NFDSTPPSPLQKFTGHEQGISDLA-------------TIRLWDVPTATSLKTLIGHTNYV 103
F T GH++GI+ L TIRLWD+ L+ L GH V
Sbjct: 363 -FVRT-------LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV 414
Query: 104 FCINFNPQSNRIVSDTFNETIRIWDIKTGK---------CLKVLPAHSDPVTAIDFNRDG 154
CI F+ + RIVS ++ I++WD++ CL+ L HS V + F D
Sbjct: 415 RCIRFD--NKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DE 470
Query: 155 TMIVTSSYDGLYRILD 170
I++SS+D I D
Sbjct: 471 FQIISSSHDDTILIWD 486
Score = 158 (60.7 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 50/189 (26%), Positives = 94/189 (49%)
Query: 75 GISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKC 134
G+ D +I++WD + LK L GHT V C+ ++ + IV+ + + T+R+WD+ TG+
Sbjct: 224 GLRD-NSIKIWDKTSLECLKVLTGHTGSVLCLQYDERV--IVTGSSDSTVRVWDVNTGEV 280
Query: 135 LKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNG---KFILVGTLDNTLRLW 191
L L H++ V + F+ +G M VT S D + D ++ + +LVG + +
Sbjct: 281 LNTLIHHNEAVLHLRFS-NGLM-VTCSKDRSIAVWDMASATDITLRRVLVGHRA-AVNVV 337
Query: 192 NYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDND 251
++ + I+ SG K +ST + + H+ + + ++ SG+ DN
Sbjct: 338 DFDDKYIVSA-SGDRTIKVWSTSTCEFV--RTLNGHKRGIACLQYRD--RLVVSGSSDN- 391
Query: 252 RTMKIWTQE 260
T+++W E
Sbjct: 392 -TIRLWDIE 399
Score = 153 (58.9 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 44/157 (28%), Positives = 81/157 (51%)
Query: 103 VFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSY 162
V+C+ ++ + +I+S + +I+IWD + +CLKVL H+ V + + D +IVT S
Sbjct: 211 VYCLQYDDE--KIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQY--DERVIVTGSS 266
Query: 163 DGLYRILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGK 222
D R+ D +T L+ + L L +S ++ + + + ++S +T +
Sbjct: 267 DSTVRVWDVNTGEVLNTLIHHNEAVLHL-RFSNGLMVTCSKDRSIAVWDMASATDITLRR 325
Query: 223 YIVSHRDPVISVASHPAKNII-ASGALDNDRTMKIWT 258
+V HR ++V K I+ ASG DRT+K+W+
Sbjct: 326 VLVGHR-AAVNVVDFDDKYIVSASG----DRTIKVWS 357
>UNIPROTKB|B4DH70 [details] [associations]
symbol:FBXW11 "cDNA FLJ54601, highly similar to F-box/WD
repeat protein 11" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AC011410 HOGENOM:HOG000006638
HOVERGEN:HBG002521 OrthoDB:EOG4F1X2M UniGene:Hs.484138
HGNC:HGNC:13607 EMBL:AC011387 EMBL:AC113342 EMBL:AK294956
IPI:IPI01013614 SMR:B4DH70 STRING:B4DH70 Ensembl:ENST00000425623
UCSC:uc011dey.1 Uniprot:B4DH70
Length = 510
Score = 174 (66.3 bits), Expect = 5.7e-11, P = 5.7e-11
Identities = 53/184 (28%), Positives = 92/184 (50%)
Query: 2 SSDRSLESFRPYT--LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFD 59
SSD ++ + T + TL H AV +++FS+ L+ + S ++++ + ++S + D
Sbjct: 265 SSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG--LMVTCSKDRSIAVWDMASAT--D 320
Query: 60 STPPSPLQKFTGHEQGIS--DL-----------ATIRLWDVPTATSLKTLIGHTNYVFCI 106
T L GH ++ D TI++W T ++TL GH + C+
Sbjct: 321 ITLRRVL---VGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACL 377
Query: 107 NFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLY 166
+ + +VS + + TIR+WDI+ G CL+VL H + V I F D IV+ +YDG
Sbjct: 378 QY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKI 433
Query: 167 RILD 170
++ D
Sbjct: 434 KVWD 437
Score = 171 (65.3 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 62/196 (31%), Positives = 91/196 (46%)
Query: 2 SSDRSLE-----SFRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSIS 56
S DRS+ S TL + L GH AV+ V F D + + S+S ++T+ +S S+
Sbjct: 305 SKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCE 362
Query: 57 NFDSTPPSPLQKFTGHEQGISDLA-------------TIRLWDVPTATSLKTLIGHTNYV 103
F T GH++GI+ L TIRLWD+ L+ L GH V
Sbjct: 363 -FVRT-------LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV 414
Query: 104 FCINFNPQSNRIVSDTFNETIRIWDIKTGK---------CLKVLPAHSDPVTAIDFNRDG 154
CI F+ + RIVS ++ I++WD++ CL+ L HS V + F D
Sbjct: 415 RCIRFD--NKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DE 470
Query: 155 TMIVTSSYDGLYRILD 170
I++SS+D I D
Sbjct: 471 FQIISSSHDDTILIWD 486
Score = 158 (60.7 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 50/189 (26%), Positives = 94/189 (49%)
Query: 75 GISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKC 134
G+ D +I++WD + LK L GHT V C+ ++ + IV+ + + T+R+WD+ TG+
Sbjct: 224 GLRD-NSIKIWDKTSLECLKVLTGHTGSVLCLQYDERV--IVTGSSDSTVRVWDVNTGEV 280
Query: 135 LKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNG---KFILVGTLDNTLRLW 191
L L H++ V + F+ +G M VT S D + D ++ + +LVG + +
Sbjct: 281 LNTLIHHNEAVLHLRFS-NGLM-VTCSKDRSIAVWDMASATDITLRRVLVGHRA-AVNVV 337
Query: 192 NYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDND 251
++ + I+ SG K +ST + + H+ + + ++ SG+ DN
Sbjct: 338 DFDDKYIVSA-SGDRTIKVWSTSTCEFV--RTLNGHKRGIACLQYRD--RLVVSGSSDN- 391
Query: 252 RTMKIWTQE 260
T+++W E
Sbjct: 392 -TIRLWDIE 399
Score = 153 (58.9 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 44/157 (28%), Positives = 81/157 (51%)
Query: 103 VFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSY 162
V+C+ ++ + +I+S + +I+IWD + +CLKVL H+ V + + D +IVT S
Sbjct: 211 VYCLQYDDE--KIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQY--DERVIVTGSS 266
Query: 163 DGLYRILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGK 222
D R+ D +T L+ + L L +S ++ + + + ++S +T +
Sbjct: 267 DSTVRVWDVNTGEVLNTLIHHNEAVLHL-RFSNGLMVTCSKDRSIAVWDMASATDITLRR 325
Query: 223 YIVSHRDPVISVASHPAKNII-ASGALDNDRTMKIWT 258
+V HR ++V K I+ ASG DRT+K+W+
Sbjct: 326 VLVGHR-AAVNVVDFDDKYIVSASG----DRTIKVWS 357
>UNIPROTKB|F1M373 [details] [associations]
symbol:Fbxw11 "Protein Fbxw11" species:10116 "Rattus
norvegicus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1309121 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 GO:GO:0045892
GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842
GO:GO:0045862 GO:GO:0000209 GO:GO:0031648 GO:GO:0042347
GO:GO:0031146 GO:GO:0042753 IPI:IPI00870648
Ensembl:ENSRNOT00000006078 ArrayExpress:F1M373 Uniprot:F1M373
Length = 527
Score = 174 (66.3 bits), Expect = 6.1e-11, P = 6.1e-11
Identities = 53/184 (28%), Positives = 92/184 (50%)
Query: 2 SSDRSLESFRPYT--LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFD 59
SSD ++ + T + TL H AV +++FS+ L+ + S ++++ + ++S + D
Sbjct: 282 SSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG--LMVTCSKDRSIAVWDMASAT--D 337
Query: 60 STPPSPLQKFTGHEQGIS--DL-----------ATIRLWDVPTATSLKTLIGHTNYVFCI 106
T L GH ++ D TI++W T ++TL GH + C+
Sbjct: 338 ITLRRVL---VGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACL 394
Query: 107 NFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLY 166
+ + +VS + + TIR+WDI+ G CL+VL H + V I F D IV+ +YDG
Sbjct: 395 QY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKI 450
Query: 167 RILD 170
++ D
Sbjct: 451 KVWD 454
Score = 171 (65.3 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 62/196 (31%), Positives = 91/196 (46%)
Query: 2 SSDRSLE-----SFRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSIS 56
S DRS+ S TL + L GH AV+ V F D + + S+S ++T+ +S S+
Sbjct: 322 SKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCE 379
Query: 57 NFDSTPPSPLQKFTGHEQGISDLA-------------TIRLWDVPTATSLKTLIGHTNYV 103
F T GH++GI+ L TIRLWD+ L+ L GH V
Sbjct: 380 -FVRT-------LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV 431
Query: 104 FCINFNPQSNRIVSDTFNETIRIWDIKTGK---------CLKVLPAHSDPVTAIDFNRDG 154
CI F+ + RIVS ++ I++WD++ CL+ L HS V + F D
Sbjct: 432 RCIRFD--NKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DE 487
Query: 155 TMIVTSSYDGLYRILD 170
I++SS+D I D
Sbjct: 488 FQIISSSHDDTILIWD 503
Score = 158 (60.7 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 50/189 (26%), Positives = 94/189 (49%)
Query: 75 GISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKC 134
G+ D +I++WD + LK L GHT V C+ ++ + IV+ + + T+R+WD+ TG+
Sbjct: 241 GLRD-NSIKIWDKSSLECLKVLTGHTGSVLCLQYDERV--IVTGSSDSTVRVWDVNTGEV 297
Query: 135 LKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNG---KFILVGTLDNTLRLW 191
L L H++ V + F+ +G M VT S D + D ++ + +LVG + +
Sbjct: 298 LNTLIHHNEAVLHLRFS-NGLM-VTCSKDRSIAVWDMASATDITLRRVLVGHRA-AVNVV 354
Query: 192 NYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDND 251
++ + I+ SG K +ST + + H+ + + ++ SG+ DN
Sbjct: 355 DFDDKYIVSA-SGDRTIKVWSTSTCEFV--RTLNGHKRGIACLQYRD--RLVVSGSSDN- 408
Query: 252 RTMKIWTQE 260
T+++W E
Sbjct: 409 -TIRLWDIE 416
Score = 154 (59.3 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 44/157 (28%), Positives = 81/157 (51%)
Query: 103 VFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSY 162
V+C+ ++ ++I+S + +I+IWD + +CLKVL H+ V + + D +IVT S
Sbjct: 228 VYCLQYD--DDKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQY--DERVIVTGSS 283
Query: 163 DGLYRILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGK 222
D R+ D +T L+ + L L +S ++ + + + ++S +T +
Sbjct: 284 DSTVRVWDVNTGEVLNTLIHHNEAVLHL-RFSNGLMVTCSKDRSIAVWDMASATDITLRR 342
Query: 223 YIVSHRDPVISVASHPAKNII-ASGALDNDRTMKIWT 258
+V HR ++V K I+ ASG DRT+K+W+
Sbjct: 343 VLVGHR-AAVNVVDFDDKYIVSASG----DRTIKVWS 374
>UNIPROTKB|E2RTE4 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:E2RTE4 Ensembl:ENSCAFT00000026749 Uniprot:E2RTE4
Length = 529
Score = 174 (66.3 bits), Expect = 6.1e-11, P = 6.1e-11
Identities = 53/184 (28%), Positives = 92/184 (50%)
Query: 2 SSDRSLESFRPYT--LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFD 59
SSD ++ + T + TL H AV +++FS+ L+ + S ++++ + ++S + D
Sbjct: 284 SSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG--LMVTCSKDRSIAVWDMASAT--D 339
Query: 60 STPPSPLQKFTGHEQGIS--DL-----------ATIRLWDVPTATSLKTLIGHTNYVFCI 106
T L GH ++ D TI++W T ++TL GH + C+
Sbjct: 340 ITLRRVL---VGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACL 396
Query: 107 NFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLY 166
+ + +VS + + TIR+WDI+ G CL+VL H + V I F D IV+ +YDG
Sbjct: 397 QY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKI 452
Query: 167 RILD 170
++ D
Sbjct: 453 KVWD 456
Score = 171 (65.3 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 62/196 (31%), Positives = 91/196 (46%)
Query: 2 SSDRSLE-----SFRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSIS 56
S DRS+ S TL + L GH AV+ V F D + + S+S ++T+ +S S+
Sbjct: 324 SKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCE 381
Query: 57 NFDSTPPSPLQKFTGHEQGISDLA-------------TIRLWDVPTATSLKTLIGHTNYV 103
F T GH++GI+ L TIRLWD+ L+ L GH V
Sbjct: 382 -FVRT-------LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV 433
Query: 104 FCINFNPQSNRIVSDTFNETIRIWDIKTGK---------CLKVLPAHSDPVTAIDFNRDG 154
CI F+ + RIVS ++ I++WD++ CL+ L HS V + F D
Sbjct: 434 RCIRFD--NKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DE 489
Query: 155 TMIVTSSYDGLYRILD 170
I++SS+D I D
Sbjct: 490 FQIISSSHDDTILIWD 505
Score = 158 (60.7 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 50/189 (26%), Positives = 94/189 (49%)
Query: 75 GISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKC 134
G+ D +I++WD + LK L GHT V C+ ++ + IV+ + + T+R+WD+ TG+
Sbjct: 243 GLRD-NSIKIWDKTSLECLKVLTGHTGSVLCLQYDERV--IVTGSSDSTVRVWDVNTGEV 299
Query: 135 LKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNG---KFILVGTLDNTLRLW 191
L L H++ V + F+ +G M VT S D + D ++ + +LVG + +
Sbjct: 300 LNTLIHHNEAVLHLRFS-NGLM-VTCSKDRSIAVWDMASATDITLRRVLVGHRA-AVNVV 356
Query: 192 NYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDND 251
++ + I+ SG K +ST + + H+ + + ++ SG+ DN
Sbjct: 357 DFDDKYIVSA-SGDRTIKVWSTSTCEFV--RTLNGHKRGIACLQYRD--RLVVSGSSDN- 410
Query: 252 RTMKIWTQE 260
T+++W E
Sbjct: 411 -TIRLWDIE 418
Score = 153 (58.9 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 44/157 (28%), Positives = 81/157 (51%)
Query: 103 VFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSY 162
V+C+ ++ + +I+S + +I+IWD + +CLKVL H+ V + + D +IVT S
Sbjct: 230 VYCLQYDDE--KIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQY--DERVIVTGSS 285
Query: 163 DGLYRILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGK 222
D R+ D +T L+ + L L +S ++ + + + ++S +T +
Sbjct: 286 DSTVRVWDVNTGEVLNTLIHHNEAVLHL-RFSNGLMVTCSKDRSIAVWDMASATDITLRR 344
Query: 223 YIVSHRDPVISVASHPAKNII-ASGALDNDRTMKIWT 258
+V HR ++V K I+ ASG DRT+K+W+
Sbjct: 345 VLVGHR-AAVNVVDFDDKYIVSASG----DRTIKVWS 376
>UNIPROTKB|F1MLG0 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045862 "positive
regulation of proteolysis" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0031648 "protein destabilization" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:DAAA02049882
EMBL:DAAA02049883 IPI:IPI00699126 Ensembl:ENSBTAT00000061118
Uniprot:F1MLG0
Length = 530
Score = 174 (66.3 bits), Expect = 6.2e-11, P = 6.2e-11
Identities = 53/184 (28%), Positives = 92/184 (50%)
Query: 2 SSDRSLESFRPYT--LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFD 59
SSD ++ + T + TL H AV +++FS+ L+ + S ++++ + ++S + D
Sbjct: 285 SSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG--LMVTCSKDRSIAVWDMASAT--D 340
Query: 60 STPPSPLQKFTGHEQGIS--DL-----------ATIRLWDVPTATSLKTLIGHTNYVFCI 106
T L GH ++ D TI++W T ++TL GH + C+
Sbjct: 341 ITLRRVL---VGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACL 397
Query: 107 NFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLY 166
+ + +VS + + TIR+WDI+ G CL+VL H + V I F D IV+ +YDG
Sbjct: 398 QY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKI 453
Query: 167 RILD 170
++ D
Sbjct: 454 KVWD 457
Score = 171 (65.3 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 62/196 (31%), Positives = 91/196 (46%)
Query: 2 SSDRSLE-----SFRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSIS 56
S DRS+ S TL + L GH AV+ V F D + + S+S ++T+ +S S+
Sbjct: 325 SKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCE 382
Query: 57 NFDSTPPSPLQKFTGHEQGISDLA-------------TIRLWDVPTATSLKTLIGHTNYV 103
F T GH++GI+ L TIRLWD+ L+ L GH V
Sbjct: 383 -FVRT-------LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV 434
Query: 104 FCINFNPQSNRIVSDTFNETIRIWDIKTGK---------CLKVLPAHSDPVTAIDFNRDG 154
CI F+ + RIVS ++ I++WD++ CL+ L HS V + F D
Sbjct: 435 RCIRFD--NKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DE 490
Query: 155 TMIVTSSYDGLYRILD 170
I++SS+D I D
Sbjct: 491 FQIISSSHDDTILIWD 506
Score = 158 (60.7 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 50/189 (26%), Positives = 94/189 (49%)
Query: 75 GISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKC 134
G+ D +I++WD + LK L GHT V C+ ++ + IV+ + + T+R+WD+ TG+
Sbjct: 244 GLRD-NSIKIWDKTSLECLKVLTGHTGSVLCLQYDERV--IVTGSSDSTVRVWDVNTGEV 300
Query: 135 LKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNG---KFILVGTLDNTLRLW 191
L L H++ V + F+ +G M VT S D + D ++ + +LVG + +
Sbjct: 301 LNTLIHHNEAVLHLRFS-NGLM-VTCSKDRSIAVWDMASATDITLRRVLVGHRA-AVNVV 357
Query: 192 NYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDND 251
++ + I+ SG K +ST + + H+ + + ++ SG+ DN
Sbjct: 358 DFDDKYIVSA-SGDRTIKVWSTSTCEFV--RTLNGHKRGIACLQYRD--RLVVSGSSDN- 411
Query: 252 RTMKIWTQE 260
T+++W E
Sbjct: 412 -TIRLWDIE 419
Score = 153 (58.9 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 44/157 (28%), Positives = 81/157 (51%)
Query: 103 VFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSY 162
V+C+ ++ + +I+S + +I+IWD + +CLKVL H+ V + + D +IVT S
Sbjct: 231 VYCLQYDDE--KIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQY--DERVIVTGSS 286
Query: 163 DGLYRILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGK 222
D R+ D +T L+ + L L +S ++ + + + ++S +T +
Sbjct: 287 DSTVRVWDVNTGEVLNTLIHHNEAVLHL-RFSNGLMVTCSKDRSIAVWDMASATDITLRR 345
Query: 223 YIVSHRDPVISVASHPAKNII-ASGALDNDRTMKIWT 258
+V HR ++V K I+ ASG DRT+K+W+
Sbjct: 346 VLVGHR-AAVNVVDFDDKYIVSASG----DRTIKVWS 377
>MGI|MGI:2144023 [details] [associations]
symbol:Fbxw11 "F-box and WD-40 domain protein 11"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=ISO;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006470
"protein dephosphorylation" evidence=IDA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO;IDA]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO;IMP] [GO:0031648 "protein
destabilization" evidence=ISO] [GO:0042347 "negative regulation of
NF-kappaB import into nucleus" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048511 "rhythmic process"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
MGI:MGI:2144023 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 EMBL:AL669951 GO:GO:0042753
EMBL:AL669844 HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362
OrthoDB:EOG4F1X2M GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AY038079 EMBL:AK041532 EMBL:AK149139 EMBL:AK152181
EMBL:AK160086 EMBL:AK166226 EMBL:AK168667 EMBL:BC034261
IPI:IPI00473301 IPI:IPI00474016 IPI:IPI00515142 IPI:IPI00969335
RefSeq:NP_001258276.1 RefSeq:NP_001258277.1 RefSeq:NP_001258278.1
RefSeq:NP_598776.1 UniGene:Mm.28017 UniGene:Mm.474118
ProteinModelPortal:Q5SRY7 SMR:Q5SRY7 DIP:DIP-59921N STRING:Q5SRY7
PhosphoSite:Q5SRY7 PRIDE:Q5SRY7 Ensembl:ENSMUST00000076383
Ensembl:ENSMUST00000093205 Ensembl:ENSMUST00000109366 GeneID:103583
KEGG:mmu:103583 UCSC:uc007ijx.1 UCSC:uc007ijy.1 UCSC:uc007ijz.1
UCSC:uc007ika.1 InParanoid:Q923H0 ChiTaRS:FBXW11 NextBio:356027
Bgee:Q5SRY7 Genevestigator:Q5SRY7 Uniprot:Q5SRY7
Length = 542
Score = 174 (66.3 bits), Expect = 6.4e-11, P = 6.4e-11
Identities = 53/184 (28%), Positives = 92/184 (50%)
Query: 2 SSDRSLESFRPYT--LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFD 59
SSD ++ + T + TL H AV +++FS+ L+ + S ++++ + ++S + D
Sbjct: 297 SSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG--LMVTCSKDRSIAVWDMASAT--D 352
Query: 60 STPPSPLQKFTGHEQGIS--DL-----------ATIRLWDVPTATSLKTLIGHTNYVFCI 106
T L GH ++ D TI++W T ++TL GH + C+
Sbjct: 353 ITLRRVL---VGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACL 409
Query: 107 NFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLY 166
+ + +VS + + TIR+WDI+ G CL+VL H + V I F D IV+ +YDG
Sbjct: 410 QY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKI 465
Query: 167 RILD 170
++ D
Sbjct: 466 KVWD 469
Score = 171 (65.3 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 62/196 (31%), Positives = 91/196 (46%)
Query: 2 SSDRSLE-----SFRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSIS 56
S DRS+ S TL + L GH AV+ V F D + + S+S ++T+ +S S+
Sbjct: 337 SKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCE 394
Query: 57 NFDSTPPSPLQKFTGHEQGISDLA-------------TIRLWDVPTATSLKTLIGHTNYV 103
F T GH++GI+ L TIRLWD+ L+ L GH V
Sbjct: 395 -FVRT-------LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV 446
Query: 104 FCINFNPQSNRIVSDTFNETIRIWDIKTGK---------CLKVLPAHSDPVTAIDFNRDG 154
CI F+ + RIVS ++ I++WD++ CL+ L HS V + F D
Sbjct: 447 RCIRFD--NKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DE 502
Query: 155 TMIVTSSYDGLYRILD 170
I++SS+D I D
Sbjct: 503 FQIISSSHDDTILIWD 518
Score = 158 (60.7 bits), Expect = 6.1e-09, P = 6.1e-09
Identities = 50/189 (26%), Positives = 94/189 (49%)
Query: 75 GISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKC 134
G+ D +I++WD + LK L GHT V C+ ++ + IV+ + + T+R+WD+ TG+
Sbjct: 256 GLRD-NSIKIWDKSSLECLKVLTGHTGSVLCLQYDERV--IVTGSSDSTVRVWDVNTGEV 312
Query: 135 LKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNG---KFILVGTLDNTLRLW 191
L L H++ V + F+ +G M VT S D + D ++ + +LVG + +
Sbjct: 313 LNTLIHHNEAVLHLRFS-NGLM-VTCSKDRSIAVWDMASATDITLRRVLVGHRA-AVNVV 369
Query: 192 NYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDND 251
++ + I+ SG K +ST + + H+ + + ++ SG+ DN
Sbjct: 370 DFDDKYIVSA-SGDRTIKVWSTSTCEFV--RTLNGHKRGIACLQYRD--RLVVSGSSDN- 423
Query: 252 RTMKIWTQE 260
T+++W E
Sbjct: 424 -TIRLWDIE 431
Score = 154 (59.3 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 44/157 (28%), Positives = 81/157 (51%)
Query: 103 VFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSY 162
V+C+ ++ ++I+S + +I+IWD + +CLKVL H+ V + + D +IVT S
Sbjct: 243 VYCLQYD--DDKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQY--DERVIVTGSS 298
Query: 163 DGLYRILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGK 222
D R+ D +T L+ + L L +S ++ + + + ++S +T +
Sbjct: 299 DSTVRVWDVNTGEVLNTLIHHNEAVLHL-RFSNGLMVTCSKDRSIAVWDMASATDITLRR 357
Query: 223 YIVSHRDPVISVASHPAKNII-ASGALDNDRTMKIWT 258
+V HR ++V K I+ ASG DRT+K+W+
Sbjct: 358 VLVGHR-AAVNVVDFDDKYIVSASG----DRTIKVWS 389
>UNIPROTKB|F1PBF1 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 KO:K03362 GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AAEX03003014 RefSeq:XP_866627.1
ProteinModelPortal:F1PBF1 Ensembl:ENSCAFT00000026752 GeneID:479291
KEGG:cfa:479291 Uniprot:F1PBF1
Length = 542
Score = 174 (66.3 bits), Expect = 6.4e-11, P = 6.4e-11
Identities = 53/184 (28%), Positives = 92/184 (50%)
Query: 2 SSDRSLESFRPYT--LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFD 59
SSD ++ + T + TL H AV +++FS+ L+ + S ++++ + ++S + D
Sbjct: 297 SSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG--LMVTCSKDRSIAVWDMASAT--D 352
Query: 60 STPPSPLQKFTGHEQGIS--DL-----------ATIRLWDVPTATSLKTLIGHTNYVFCI 106
T L GH ++ D TI++W T ++TL GH + C+
Sbjct: 353 ITLRRVL---VGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACL 409
Query: 107 NFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLY 166
+ + +VS + + TIR+WDI+ G CL+VL H + V I F D IV+ +YDG
Sbjct: 410 QY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKI 465
Query: 167 RILD 170
++ D
Sbjct: 466 KVWD 469
Score = 171 (65.3 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 62/196 (31%), Positives = 91/196 (46%)
Query: 2 SSDRSLE-----SFRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSIS 56
S DRS+ S TL + L GH AV+ V F D + + S+S ++T+ +S S+
Sbjct: 337 SKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCE 394
Query: 57 NFDSTPPSPLQKFTGHEQGISDLA-------------TIRLWDVPTATSLKTLIGHTNYV 103
F T GH++GI+ L TIRLWD+ L+ L GH V
Sbjct: 395 -FVRT-------LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV 446
Query: 104 FCINFNPQSNRIVSDTFNETIRIWDIKTGK---------CLKVLPAHSDPVTAIDFNRDG 154
CI F+ + RIVS ++ I++WD++ CL+ L HS V + F D
Sbjct: 447 RCIRFD--NKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DE 502
Query: 155 TMIVTSSYDGLYRILD 170
I++SS+D I D
Sbjct: 503 FQIISSSHDDTILIWD 518
Score = 158 (60.7 bits), Expect = 6.1e-09, P = 6.1e-09
Identities = 50/189 (26%), Positives = 94/189 (49%)
Query: 75 GISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKC 134
G+ D +I++WD + LK L GHT V C+ ++ + IV+ + + T+R+WD+ TG+
Sbjct: 256 GLRD-NSIKIWDKTSLECLKVLTGHTGSVLCLQYDERV--IVTGSSDSTVRVWDVNTGEV 312
Query: 135 LKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNG---KFILVGTLDNTLRLW 191
L L H++ V + F+ +G M VT S D + D ++ + +LVG + +
Sbjct: 313 LNTLIHHNEAVLHLRFS-NGLM-VTCSKDRSIAVWDMASATDITLRRVLVGHRA-AVNVV 369
Query: 192 NYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDND 251
++ + I+ SG K +ST + + H+ + + ++ SG+ DN
Sbjct: 370 DFDDKYIVSA-SGDRTIKVWSTSTCEFV--RTLNGHKRGIACLQYRD--RLVVSGSSDN- 423
Query: 252 RTMKIWTQE 260
T+++W E
Sbjct: 424 -TIRLWDIE 431
Score = 153 (58.9 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 44/157 (28%), Positives = 81/157 (51%)
Query: 103 VFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSY 162
V+C+ ++ + +I+S + +I+IWD + +CLKVL H+ V + + D +IVT S
Sbjct: 243 VYCLQYDDE--KIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQY--DERVIVTGSS 298
Query: 163 DGLYRILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGK 222
D R+ D +T L+ + L L +S ++ + + + ++S +T +
Sbjct: 299 DSTVRVWDVNTGEVLNTLIHHNEAVLHL-RFSNGLMVTCSKDRSIAVWDMASATDITLRR 357
Query: 223 YIVSHRDPVISVASHPAKNII-ASGALDNDRTMKIWT 258
+V HR ++V K I+ ASG DRT+K+W+
Sbjct: 358 VLVGHR-AAVNVVDFDDKYIVSASG----DRTIKVWS 389
>UNIPROTKB|Q9UKB1 [details] [associations]
symbol:FBXW11 "F-box/WD repeat-containing protein 11"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=NAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA;NAS] [GO:0016567
"protein ubiquitination" evidence=IDA;NAS] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IDA] [GO:0006470 "protein
dephosphorylation" evidence=ISS] [GO:0042753 "positive regulation
of circadian rhythm" evidence=ISS] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0031648 "protein destabilization"
evidence=IMP] [GO:0045862 "positive regulation of proteolysis"
evidence=IMP] [GO:0005813 "centrosome" evidence=IDA] [GO:0005829
"cytosol" evidence=ISS;TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 Reactome:REACT_6900
GO:GO:0045892 GO:GO:0045893
Pathway_Interaction_DB:wnt_canonical_pathway
Pathway_Interaction_DB:ps1pathway GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862
Pathway_Interaction_DB:hedgehog_glipathway GO:GO:0000209
Pathway_Interaction_DB:hdac_classi_pathway
Pathway_Interaction_DB:nfkappabatypicalpathway
Pathway_Interaction_DB:nfkappabcanonicalpathway GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753 HOGENOM:HOG000006638
HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M EMBL:AF176022
EMBL:AB033279 EMBL:AB033280 EMBL:AB033281 EMBL:AB014596
EMBL:AK314999 EMBL:BC026213 IPI:IPI00301283 IPI:IPI00306671
IPI:IPI00328796 RefSeq:NP_036432.2 RefSeq:NP_387448.2
RefSeq:NP_387449.2 UniGene:Hs.484138 ProteinModelPortal:Q9UKB1
SMR:Q9UKB1 DIP:DIP-27593N IntAct:Q9UKB1 MINT:MINT-120522
STRING:Q9UKB1 PhosphoSite:Q9UKB1 DMDM:13124267 PRIDE:Q9UKB1
DNASU:23291 Ensembl:ENST00000265094 Ensembl:ENST00000296933
Ensembl:ENST00000393802 GeneID:23291 KEGG:hsa:23291 UCSC:uc003mbl.1
UCSC:uc003mbm.1 UCSC:uc003mbn.1 CTD:23291 GeneCards:GC05M171288
HGNC:HGNC:13607 MIM:605651 neXtProt:NX_Q9UKB1 PharmGKB:PA28050
InParanoid:Q9UKB1 OMA:FDQWSEA PhylomeDB:Q9UKB1
Pathway_Interaction_DB:nfkappabalternativepathway GenomeRNAi:23291
NextBio:45108 ArrayExpress:Q9UKB1 Bgee:Q9UKB1 CleanEx:HS_FBXW11
Genevestigator:Q9UKB1 GermOnline:ENSG00000072803 Uniprot:Q9UKB1
Length = 542
Score = 174 (66.3 bits), Expect = 6.4e-11, P = 6.4e-11
Identities = 53/184 (28%), Positives = 92/184 (50%)
Query: 2 SSDRSLESFRPYT--LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFD 59
SSD ++ + T + TL H AV +++FS+ L+ + S ++++ + ++S + D
Sbjct: 297 SSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG--LMVTCSKDRSIAVWDMASAT--D 352
Query: 60 STPPSPLQKFTGHEQGIS--DL-----------ATIRLWDVPTATSLKTLIGHTNYVFCI 106
T L GH ++ D TI++W T ++TL GH + C+
Sbjct: 353 ITLRRVL---VGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACL 409
Query: 107 NFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLY 166
+ + +VS + + TIR+WDI+ G CL+VL H + V I F D IV+ +YDG
Sbjct: 410 QY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKI 465
Query: 167 RILD 170
++ D
Sbjct: 466 KVWD 469
Score = 171 (65.3 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 62/196 (31%), Positives = 91/196 (46%)
Query: 2 SSDRSLE-----SFRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSIS 56
S DRS+ S TL + L GH AV+ V F D + + S+S ++T+ +S S+
Sbjct: 337 SKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCE 394
Query: 57 NFDSTPPSPLQKFTGHEQGISDLA-------------TIRLWDVPTATSLKTLIGHTNYV 103
F T GH++GI+ L TIRLWD+ L+ L GH V
Sbjct: 395 -FVRT-------LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV 446
Query: 104 FCINFNPQSNRIVSDTFNETIRIWDIKTGK---------CLKVLPAHSDPVTAIDFNRDG 154
CI F+ + RIVS ++ I++WD++ CL+ L HS V + F D
Sbjct: 447 RCIRFD--NKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DE 502
Query: 155 TMIVTSSYDGLYRILD 170
I++SS+D I D
Sbjct: 503 FQIISSSHDDTILIWD 518
Score = 158 (60.7 bits), Expect = 6.1e-09, P = 6.1e-09
Identities = 50/189 (26%), Positives = 94/189 (49%)
Query: 75 GISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKC 134
G+ D +I++WD + LK L GHT V C+ ++ + IV+ + + T+R+WD+ TG+
Sbjct: 256 GLRD-NSIKIWDKTSLECLKVLTGHTGSVLCLQYDERV--IVTGSSDSTVRVWDVNTGEV 312
Query: 135 LKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNG---KFILVGTLDNTLRLW 191
L L H++ V + F+ +G M VT S D + D ++ + +LVG + +
Sbjct: 313 LNTLIHHNEAVLHLRFS-NGLM-VTCSKDRSIAVWDMASATDITLRRVLVGHRA-AVNVV 369
Query: 192 NYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDND 251
++ + I+ SG K +ST + + H+ + + ++ SG+ DN
Sbjct: 370 DFDDKYIVSA-SGDRTIKVWSTSTCEFV--RTLNGHKRGIACLQYRD--RLVVSGSSDN- 423
Query: 252 RTMKIWTQE 260
T+++W E
Sbjct: 424 -TIRLWDIE 431
Score = 153 (58.9 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 44/157 (28%), Positives = 81/157 (51%)
Query: 103 VFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSY 162
V+C+ ++ + +I+S + +I+IWD + +CLKVL H+ V + + D +IVT S
Sbjct: 243 VYCLQYDDE--KIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQY--DERVIVTGSS 298
Query: 163 DGLYRILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGK 222
D R+ D +T L+ + L L +S ++ + + + ++S +T +
Sbjct: 299 DSTVRVWDVNTGEVLNTLIHHNEAVLHL-RFSNGLMVTCSKDRSIAVWDMASATDITLRR 357
Query: 223 YIVSHRDPVISVASHPAKNII-ASGALDNDRTMKIWT 258
+V HR ++V K I+ ASG DRT+K+W+
Sbjct: 358 VLVGHR-AAVNVVDFDDKYIVSASG----DRTIKVWS 389
>WB|WBGene00003009 [details] [associations]
symbol:lin-23 species:6239 "Caenorhabditis elegans"
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0040015 "negative regulation of multicellular organism growth"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] [GO:0008285 "negative regulation of
cell proliferation" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0006898 GO:GO:0005737 GO:GO:0040007
GO:GO:0040010 GO:GO:0008285 GO:GO:0051301 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0010171 GO:GO:0040011 GO:GO:0048812 SUPFAM:SSF81383
GO:GO:0007049 GO:GO:0040035 GO:GO:0040015 EMBL:FO080748
HOGENOM:HOG000006638 KO:K03362 GeneTree:ENSGT00690000101849
EMBL:AF275253 PIR:T16607 RefSeq:NP_495285.1 UniGene:Cel.17632
ProteinModelPortal:Q09990 SMR:Q09990 STRING:Q09990 PaxDb:Q09990
EnsemblMetazoa:K10B2.1 GeneID:174058 KEGG:cel:CELE_K10B2.1
UCSC:K10B2.1 CTD:174058 WormBase:K10B2.1 InParanoid:Q09990
OMA:IKVWSMD NextBio:882327 Uniprot:Q09990
Length = 665
Score = 175 (66.7 bits), Expect = 6.5e-11, P = 6.5e-11
Identities = 64/199 (32%), Positives = 98/199 (49%)
Query: 2 SSDRSLE-----SFRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSIS 56
S DRS+ S R T+ + L GH AV+ V F D R + S+S ++T+ +S+ ++
Sbjct: 319 SKDRSIAVWDMVSPRDITIRRVLVGHRAAVNVVDF--DDRYIVSASGDRTIKVWSMDTLE 376
Query: 57 NFDSTPPSPLQ-----KFTGH--EQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFN 109
F T + ++ G G SD TIRLWD+ + L+ L GH V CI F+
Sbjct: 377 -FVRTLAGHRRGIACLQYRGRLVVSGSSD-NTIRLWDIHSGVCLRVLEGHEELVRCIRFD 434
Query: 110 PQSNRIVSDTFNETIRIWDIKTGK---------CLKVLPAHSDPVTAIDFNRDGTMIVTS 160
+ RIVS ++ I++WD++ CL L H+ V + F D IV+S
Sbjct: 435 EK--RIVSGAYDGKIKVWDLQAALDPRALSSEICLCSLVQHTGRVFRLQF--DDFQIVSS 490
Query: 161 SYDG---LYRILDASTPNG 176
S+D ++ LDA P+G
Sbjct: 491 SHDDTILIWDFLDAP-PSG 508
Score = 171 (65.3 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 54/187 (28%), Positives = 94/187 (50%)
Query: 75 GISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNR-IVSDTFNETIRIWDIKTGK 133
G+ D TI++WD + + L GHT V C+ ++ NR I+S + + T+R+WD++TG+
Sbjct: 238 GLRD-NTIKIWDRKDYSCSRILSGHTGSVLCLQYD---NRVIISGSSDATVRVWDVETGE 293
Query: 134 CLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNG---KFILVGTLDNTLRL 190
C+K L H + V + F +G M VT S D + D +P + +LVG + +
Sbjct: 294 CIKTLIHHCEAVLHLRF-ANGIM-VTCSKDRSIAVWDMVSPRDITIRRVLVGHRA-AVNV 350
Query: 191 WNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDN 250
++ R I+ SG K T + + HR I+ + + ++ SG+ DN
Sbjct: 351 VDFDDRYIVSA-SGDRTIKVWSMDTLEFV--RTLAGHRRG-IACLQYRGR-LVVSGSSDN 405
Query: 251 DRTMKIW 257
T+++W
Sbjct: 406 --TIRLW 410
Score = 167 (63.8 bits), Expect = 6.8e-10, P = 6.8e-10
Identities = 49/167 (29%), Positives = 86/167 (51%)
Query: 17 QTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGHEQGI 76
+TL H AV +++F++ G ++T S ++++ + + +S D T L GH +
Sbjct: 296 KTLIHHCEAVLHLRFAN-GIMVTCSK-DRSIAVWDM--VSPRDITIRRVL---VGHRAAV 348
Query: 77 S--DL-----------ATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNET 123
+ D TI++W + T ++TL GH + C+ + + +VS + + T
Sbjct: 349 NVVDFDDRYIVSASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQY--RGRLVVSGSSDNT 406
Query: 124 IRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
IR+WDI +G CL+VL H + V I F D IV+ +YDG ++ D
Sbjct: 407 IRLWDIHSGVCLRVLEGHEELVRCIRF--DEKRIVSGAYDGKIKVWD 451
Score = 139 (54.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 40/159 (25%), Positives = 78/159 (49%)
Query: 103 VFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSY 162
V+C+ ++ ++IVS + TI+IWD K C ++L H+ V + + D +I++ S
Sbjct: 225 VYCLQYD--DDKIVSGLRDNTIKIWDRKDYSCSRILSGHTGSVLCLQY--DNRVIISGSS 280
Query: 163 DGLYRILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGK 222
D R+ D T L+ + L L ++ ++ + + + + S +T +
Sbjct: 281 DATVRVWDVETGECIKTLIHHCEAVLHL-RFANGIMVTCSKDRSIAVWDMVSPRDITIRR 339
Query: 223 YIVSHRDPVISVASHPAKNII-ASGALDNDRTMKIWTQE 260
+V HR ++V + I+ ASG DRT+K+W+ +
Sbjct: 340 VLVGHR-AAVNVVDFDDRYIVSASG----DRTIKVWSMD 373
Score = 120 (47.3 bits), Expect = 0.00021, P = 0.00021
Identities = 44/203 (21%), Positives = 97/203 (47%)
Query: 11 RPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS---ISNFDSTPPSPLQ 67
+ Y+ ++ L+GH +V +++ D R++ S S++ T+ + + + I + L
Sbjct: 250 KDYSCSRILSGHTGSVLCLQY--DNRVIISGSSDATVRVWDVETGECIKTLIHHCEAVLH 307
Query: 68 -KFT-GHEQGISDLATIRLWDVPTATSL---KTLIGHTNYVFCINFNPQSNRIVSDTFNE 122
+F G S +I +WD+ + + + L+GH V ++F+ + IVS + +
Sbjct: 308 LRFANGIMVTCSKDRSIAVWDMVSPRDITIRRVLVGHRAAVNVVDFDDRY--IVSASGDR 365
Query: 123 TIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVG 182
TI++W + T + ++ L H + + + G ++V+ S D R+ D + +L G
Sbjct: 366 TIKVWSMDTLEFVRTLAGHRRGIACLQYR--GRLVVSGSSDNTIRLWDIHSGVCLRVLEG 423
Query: 183 TLDNTLRLWNYSTRKILK-TYSG 204
+ +R + ++I+ Y G
Sbjct: 424 H-EELVRCIRFDEKRIVSGAYDG 445
>UNIPROTKB|Q09990 [details] [associations]
symbol:lin-23 "F-box/WD repeat-containing protein lin-23"
species:6239 "Caenorhabditis elegans" [GO:0005737 "cytoplasm"
evidence=NAS] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0008285
GO:GO:0051301 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010171 GO:GO:0040011
GO:GO:0048812 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0040035
GO:GO:0040015 EMBL:FO080748 HOGENOM:HOG000006638 KO:K03362
GeneTree:ENSGT00690000101849 EMBL:AF275253 PIR:T16607
RefSeq:NP_495285.1 UniGene:Cel.17632 ProteinModelPortal:Q09990
SMR:Q09990 STRING:Q09990 PaxDb:Q09990 EnsemblMetazoa:K10B2.1
GeneID:174058 KEGG:cel:CELE_K10B2.1 UCSC:K10B2.1 CTD:174058
WormBase:K10B2.1 InParanoid:Q09990 OMA:IKVWSMD NextBio:882327
Uniprot:Q09990
Length = 665
Score = 175 (66.7 bits), Expect = 6.5e-11, P = 6.5e-11
Identities = 64/199 (32%), Positives = 98/199 (49%)
Query: 2 SSDRSLE-----SFRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSIS 56
S DRS+ S R T+ + L GH AV+ V F D R + S+S ++T+ +S+ ++
Sbjct: 319 SKDRSIAVWDMVSPRDITIRRVLVGHRAAVNVVDF--DDRYIVSASGDRTIKVWSMDTLE 376
Query: 57 NFDSTPPSPLQ-----KFTGH--EQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFN 109
F T + ++ G G SD TIRLWD+ + L+ L GH V CI F+
Sbjct: 377 -FVRTLAGHRRGIACLQYRGRLVVSGSSD-NTIRLWDIHSGVCLRVLEGHEELVRCIRFD 434
Query: 110 PQSNRIVSDTFNETIRIWDIKTGK---------CLKVLPAHSDPVTAIDFNRDGTMIVTS 160
+ RIVS ++ I++WD++ CL L H+ V + F D IV+S
Sbjct: 435 EK--RIVSGAYDGKIKVWDLQAALDPRALSSEICLCSLVQHTGRVFRLQF--DDFQIVSS 490
Query: 161 SYDG---LYRILDASTPNG 176
S+D ++ LDA P+G
Sbjct: 491 SHDDTILIWDFLDAP-PSG 508
Score = 171 (65.3 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 54/187 (28%), Positives = 94/187 (50%)
Query: 75 GISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNR-IVSDTFNETIRIWDIKTGK 133
G+ D TI++WD + + L GHT V C+ ++ NR I+S + + T+R+WD++TG+
Sbjct: 238 GLRD-NTIKIWDRKDYSCSRILSGHTGSVLCLQYD---NRVIISGSSDATVRVWDVETGE 293
Query: 134 CLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNG---KFILVGTLDNTLRL 190
C+K L H + V + F +G M VT S D + D +P + +LVG + +
Sbjct: 294 CIKTLIHHCEAVLHLRF-ANGIM-VTCSKDRSIAVWDMVSPRDITIRRVLVGHRA-AVNV 350
Query: 191 WNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDN 250
++ R I+ SG K T + + HR I+ + + ++ SG+ DN
Sbjct: 351 VDFDDRYIVSA-SGDRTIKVWSMDTLEFV--RTLAGHRRG-IACLQYRGR-LVVSGSSDN 405
Query: 251 DRTMKIW 257
T+++W
Sbjct: 406 --TIRLW 410
Score = 167 (63.8 bits), Expect = 6.8e-10, P = 6.8e-10
Identities = 49/167 (29%), Positives = 86/167 (51%)
Query: 17 QTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGHEQGI 76
+TL H AV +++F++ G ++T S ++++ + + +S D T L GH +
Sbjct: 296 KTLIHHCEAVLHLRFAN-GIMVTCSK-DRSIAVWDM--VSPRDITIRRVL---VGHRAAV 348
Query: 77 S--DL-----------ATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNET 123
+ D TI++W + T ++TL GH + C+ + + +VS + + T
Sbjct: 349 NVVDFDDRYIVSASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQY--RGRLVVSGSSDNT 406
Query: 124 IRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
IR+WDI +G CL+VL H + V I F D IV+ +YDG ++ D
Sbjct: 407 IRLWDIHSGVCLRVLEGHEELVRCIRF--DEKRIVSGAYDGKIKVWD 451
Score = 139 (54.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 40/159 (25%), Positives = 78/159 (49%)
Query: 103 VFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSY 162
V+C+ ++ ++IVS + TI+IWD K C ++L H+ V + + D +I++ S
Sbjct: 225 VYCLQYD--DDKIVSGLRDNTIKIWDRKDYSCSRILSGHTGSVLCLQY--DNRVIISGSS 280
Query: 163 DGLYRILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGK 222
D R+ D T L+ + L L ++ ++ + + + + S +T +
Sbjct: 281 DATVRVWDVETGECIKTLIHHCEAVLHL-RFANGIMVTCSKDRSIAVWDMVSPRDITIRR 339
Query: 223 YIVSHRDPVISVASHPAKNII-ASGALDNDRTMKIWTQE 260
+V HR ++V + I+ ASG DRT+K+W+ +
Sbjct: 340 VLVGHR-AAVNVVDFDDRYIVSASG----DRTIKVWSMD 373
Score = 120 (47.3 bits), Expect = 0.00021, P = 0.00021
Identities = 44/203 (21%), Positives = 97/203 (47%)
Query: 11 RPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS---ISNFDSTPPSPLQ 67
+ Y+ ++ L+GH +V +++ D R++ S S++ T+ + + + I + L
Sbjct: 250 KDYSCSRILSGHTGSVLCLQY--DNRVIISGSSDATVRVWDVETGECIKTLIHHCEAVLH 307
Query: 68 -KFT-GHEQGISDLATIRLWDVPTATSL---KTLIGHTNYVFCINFNPQSNRIVSDTFNE 122
+F G S +I +WD+ + + + L+GH V ++F+ + IVS + +
Sbjct: 308 LRFANGIMVTCSKDRSIAVWDMVSPRDITIRRVLVGHRAAVNVVDFDDRY--IVSASGDR 365
Query: 123 TIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVG 182
TI++W + T + ++ L H + + + G ++V+ S D R+ D + +L G
Sbjct: 366 TIKVWSMDTLEFVRTLAGHRRGIACLQYR--GRLVVSGSSDNTIRLWDIHSGVCLRVLEG 423
Query: 183 TLDNTLRLWNYSTRKILK-TYSG 204
+ +R + ++I+ Y G
Sbjct: 424 H-EELVRCIRFDEKRIVSGAYDG 445
>RGD|1306281 [details] [associations]
symbol:Aamp "angio-associated, migratory cell protein"
species:10116 "Rattus norvegicus" [GO:0009986 "cell surface"
evidence=IEA;ISO] [GO:0014909 "smooth muscle cell migration"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1306281 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 CTD:14
GeneTree:ENSGT00690000102167 OMA:VWSFEVG EMBL:CH474004
RefSeq:NP_001100390.1 UniGene:Rn.13592 ProteinModelPortal:G3V7V2
PRIDE:G3V7V2 Ensembl:ENSRNOT00000019497 GeneID:301512
KEGG:rno:301512 NextBio:648863 Uniprot:G3V7V2
Length = 435
Score = 154 (59.3 bits), Expect = 6.6e-11, Sum P(2) = 6.6e-11
Identities = 49/168 (29%), Positives = 74/168 (44%)
Query: 21 GHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGHEQ------ 74
GH +V+ FSHD L+ + L + + + S L+ H +
Sbjct: 133 GHKDSVTCAGFSHDSTLVATGDMSGLLKVWQVETKEEVWSFEAGDLEWMEWHPRAPVLLA 192
Query: 75 GISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKC 134
G +D T +W VP KT G C P R V + TIRIWD+K G
Sbjct: 193 GTADGNTW-MWKVPNG-DCKTFQGPNCPATCGRVLPDGKRAVVGYEDGTIRIWDLKQGNP 250
Query: 135 LKVLPA---HSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFI 179
+ VL H P+T + N+DG++I+T S D +++ A+T GK +
Sbjct: 251 IHVLKGTEGHQGPLTCVATNQDGSLILTGSVDCQAKLVSATT--GKVV 296
Score = 113 (44.8 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 21/76 (27%), Positives = 39/76 (51%)
Query: 99 HTNYVFCINFNPQSNRI-VSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMI 157
H+ VFC++ +P++N + V+ ++ +W + G+ L H D VT F+ D T++
Sbjct: 91 HSASVFCVSLDPKTNTLAVTGGEDDKAFVWRLSDGELLFECAGHKDSVTCAGFSHDSTLV 150
Query: 158 VTSSYDGLYRILDAST 173
T GL ++ T
Sbjct: 151 ATGDMSGLLKVWQVET 166
Score = 60 (26.2 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 13/44 (29%), Positives = 23/44 (52%)
Query: 174 PNGKFILVGTLDNTLRLWNYSTRK---ILKTYSGYTNSKYCISS 214
P+GK +VG D T+R+W+ +LK G+ C+++
Sbjct: 226 PDGKRAVVGYEDGTIRIWDLKQGNPIHVLKGTEGHQGPLTCVAT 269
Score = 58 (25.5 bits), Expect = 6.6e-11, Sum P(2) = 6.6e-11
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 183 TLDNTLRLWNYSTRKILKTYSGYT 206
+LD +RLW+ T ++L Y G+T
Sbjct: 378 SLDGVVRLWDARTGRLLTDYRGHT 401
Score = 40 (19.1 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 9/31 (29%), Positives = 12/31 (38%)
Query: 174 PNGKFILVGTLDNTLRLWNYSTRKILKTYSG 204
P +L GT D +W KT+ G
Sbjct: 185 PRAPVLLAGTADGNTWMWKVPNGDC-KTFQG 214
>UNIPROTKB|Q68DS0 [details] [associations]
symbol:DKFZp781N011 "Putative uncharacterized protein
DKFZp781N011" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AL627424 EMBL:AL133387 EMBL:AL445463
RefSeq:NP_003930.1 RefSeq:NP_378663.1 UniGene:Hs.643802
UniGene:Hs.713753 GeneID:8945 KEGG:hsa:8945 CTD:8945 HGNC:HGNC:1144
HOVERGEN:HBG002521 KO:K03362 ChiTaRS:BTRC GenomeRNAi:8945
EMBL:CR749295 IPI:IPI01012795 RefSeq:NP_001243785.1 SMR:Q68DS0
STRING:Q68DS0 Ensembl:ENST00000393441 Uniprot:Q68DS0
Length = 564
Score = 174 (66.3 bits), Expect = 6.9e-11, P = 6.9e-11
Identities = 53/184 (28%), Positives = 94/184 (51%)
Query: 2 SSDRSLESFRPYT--LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFD 59
SSD ++ + T + TL H AV +++F++ G ++T S ++++ + ++S + D
Sbjct: 319 SSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNN-GMMVTCSK-DRSIAVWDMASPT--D 374
Query: 60 STPPSPLQKFTGHEQGIS--DL-----------ATIRLWDVPTATSLKTLIGHTNYVFCI 106
T L GH ++ D TI++W+ T ++TL GH + C+
Sbjct: 375 ITLRRVL---VGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACL 431
Query: 107 NFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLY 166
+ + +VS + + TIR+WDI+ G CL+VL H + V I F D IV+ +YDG
Sbjct: 432 QY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKI 487
Query: 167 RILD 170
++ D
Sbjct: 488 KVWD 491
Score = 166 (63.5 bits), Expect = 6.9e-10, P = 6.9e-10
Identities = 51/189 (26%), Positives = 94/189 (49%)
Query: 75 GISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKC 134
G+ D TI++WD T + L GHT V C+ ++ + I++ + + T+R+WD+ TG+
Sbjct: 278 GLRD-NTIKIWDKNTLECKRILTGHTGSVLCLQYDERV--IITGSSDSTVRVWDVNTGEM 334
Query: 135 LKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNG---KFILVGTLDNTLRLW 191
L L H + V + FN +G M+VT S D + D ++P + +LVG + +
Sbjct: 335 LNTLIHHCEAVLHLRFN-NG-MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA-AVNVV 391
Query: 192 NYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDND 251
++ + I+ SG K +ST + + H+ + + ++ SG+ DN
Sbjct: 392 DFDDKYIVSA-SGDRTIKVWNTSTCEFV--RTLNGHKRGIACLQYRD--RLVVSGSSDN- 445
Query: 252 RTMKIWTQE 260
T+++W E
Sbjct: 446 -TIRLWDIE 453
Score = 164 (62.8 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 62/189 (32%), Positives = 90/189 (47%)
Query: 2 SSDRSL---ESFRP--YTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSIS 56
S DRS+ + P TL + L GH AV+ V F D + + S+S ++T+ ++ S+
Sbjct: 359 SKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCE 416
Query: 57 -----NFDSTPPSPLQ-KFTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNP 110
N + LQ + G SD TIRLWD+ L+ L GH V CI F+
Sbjct: 417 FVRTLNGHKRGIACLQYRDRLVVSGSSD-NTIRLWDIECGACLRVLEGHEELVRCIRFD- 474
Query: 111 QSNRIVSDTFNETIRIWDI--------KTGK-CLKVLPAHSDPVTAIDFNRDGTMIVTSS 161
+ RIVS ++ I++WD+ G CL+ L HS V + F D IV+SS
Sbjct: 475 -NKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSS 531
Query: 162 YDGLYRILD 170
+D I D
Sbjct: 532 HDDTILIWD 540
Score = 153 (58.9 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 43/156 (27%), Positives = 79/156 (50%)
Query: 103 VFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSY 162
V+C+ ++ Q +IVS + TI+IWD T +C ++L H+ V + + D +I+T S
Sbjct: 265 VYCLQYDDQ--KIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSS 320
Query: 163 DGLYRILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGK 222
D R+ D +T L+ + L L ++ ++ + + + ++S +T +
Sbjct: 321 DSTVRVWDVNTGEMLNTLIHHCEAVLHL-RFNNGMMVTCSKDRSIAVWDMASPTDITLRR 379
Query: 223 YIVSHRDPVISVASHPAKNII-ASGALDNDRTMKIW 257
+V HR ++V K I+ ASG DRT+K+W
Sbjct: 380 VLVGHR-AAVNVVDFDDKYIVSASG----DRTIKVW 410
>UNIPROTKB|H0YN81 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC090607 HGNC:HGNC:30300 ChiTaRS:WDR61
Ensembl:ENST00000560569 Bgee:H0YN81 Uniprot:H0YN81
Length = 294
Score = 156 (60.0 bits), Expect = 7.0e-11, Sum P(2) = 7.0e-11
Identities = 48/177 (27%), Positives = 77/177 (43%)
Query: 15 LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFT-GHE 73
L +L GH V V SH + SSS + + + L + S P+ +T
Sbjct: 56 LQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFS 115
Query: 74 QGISDLAT------IRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIW 127
LAT + ++ V + +L ++ I ++P + S + I I+
Sbjct: 116 PDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIF 175
Query: 128 DIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTL 184
DI TGK L L H+ P+ ++ F+ D ++VT+S DG +I D N L GTL
Sbjct: 176 DIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHAN----LAGTL 228
Score = 140 (54.3 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 34/138 (24%), Positives = 69/138 (50%)
Query: 29 VKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTP--PSPLQK--FTGHEQGI---SDLAT 81
+ +S DG+ L S + + + + +++ + P++ F+ Q + SD
Sbjct: 154 IAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGY 213
Query: 82 IRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAH 141
I+++DV A TL GH ++V + F P VS + ++++++WD+ T C+ H
Sbjct: 214 IKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDH 273
Query: 142 SDPVTAIDFNRDGTMIVT 159
D V + +N +G+ IV+
Sbjct: 274 QDQVWGVKYNGNGSKIVS 291
Score = 119 (46.9 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 37/125 (29%), Positives = 58/125 (46%)
Query: 50 YSLSSISNFD-STPPSPLQKFTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINF 108
YSL + F S SP K+ G D I ++D+ T L TL GH + + F
Sbjct: 142 YSLDTRGKFILSIAYSPDGKYLA--SGAID-GIINIFDIATGKLLHTLEGHAMPIRSLTF 198
Query: 109 NPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRI 168
+P S +V+ + + I+I+D++ L H+ V + F D T V+SS D ++
Sbjct: 199 SPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKV 258
Query: 169 LDAST 173
D T
Sbjct: 259 WDVGT 263
Score = 47 (21.6 bits), Expect = 7.0e-11, Sum P(2) = 7.0e-11
Identities = 13/59 (22%), Positives = 27/59 (45%)
Query: 171 ASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRD 229
A P+ + + D ++++W+ TR + T+ + + + + NG IVS D
Sbjct: 239 AFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYN---GNGSKIVSVGD 294
>UNIPROTKB|F1MVN1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:DAAA02058986 EMBL:DAAA02058987
EMBL:DAAA02058988 EMBL:DAAA02058989 EMBL:DAAA02058990
EMBL:DAAA02058991 IPI:IPI00717164 UniGene:Bt.25271
Ensembl:ENSBTAT00000009830 Uniprot:F1MVN1
Length = 569
Score = 174 (66.3 bits), Expect = 7.0e-11, P = 7.0e-11
Identities = 53/184 (28%), Positives = 94/184 (51%)
Query: 2 SSDRSLESFRPYT--LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFD 59
SSD ++ + T + TL H AV +++F++ G ++T S ++++ + ++S + D
Sbjct: 324 SSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNN-GMMVTCSK-DRSIAVWDMASPT--D 379
Query: 60 STPPSPLQKFTGHEQGIS--DL-----------ATIRLWDVPTATSLKTLIGHTNYVFCI 106
T L GH ++ D TI++W+ T ++TL GH + C+
Sbjct: 380 ITLRRVL---VGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACL 436
Query: 107 NFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLY 166
+ + +VS + + TIR+WDI+ G CL+VL H + V I F D IV+ +YDG
Sbjct: 437 QY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKI 492
Query: 167 RILD 170
++ D
Sbjct: 493 KVWD 496
Score = 167 (63.8 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 51/189 (26%), Positives = 94/189 (49%)
Query: 75 GISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKC 134
G+ D TI++WD T + L GHT V C+ ++ + I++ + + T+R+WD+ TG+
Sbjct: 283 GLRD-NTIKIWDKSTLECKRILTGHTGSVLCLQYDERV--IITGSSDSTVRVWDVNTGEM 339
Query: 135 LKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNG---KFILVGTLDNTLRLW 191
L L H + V + FN +G M+VT S D + D ++P + +LVG + +
Sbjct: 340 LNTLIHHCEAVLHLRFN-NG-MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA-AVNVV 396
Query: 192 NYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDND 251
++ + I+ SG K +ST + + H+ + + ++ SG+ DN
Sbjct: 397 DFDDKYIVSA-SGDRTIKVWNTSTCEFV--RTLNGHKRGIACLQYRD--RLVVSGSSDN- 450
Query: 252 RTMKIWTQE 260
T+++W E
Sbjct: 451 -TIRLWDIE 458
Score = 164 (62.8 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 62/189 (32%), Positives = 90/189 (47%)
Query: 2 SSDRSL---ESFRP--YTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSIS 56
S DRS+ + P TL + L GH AV+ V F D + + S+S ++T+ ++ S+
Sbjct: 364 SKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCE 421
Query: 57 -----NFDSTPPSPLQ-KFTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNP 110
N + LQ + G SD TIRLWD+ L+ L GH V CI F+
Sbjct: 422 FVRTLNGHKRGIACLQYRDRLVVSGSSD-NTIRLWDIECGACLRVLEGHEELVRCIRFD- 479
Query: 111 QSNRIVSDTFNETIRIWDI--------KTGK-CLKVLPAHSDPVTAIDFNRDGTMIVTSS 161
+ RIVS ++ I++WD+ G CL+ L HS V + F D IV+SS
Sbjct: 480 -NKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSS 536
Query: 162 YDGLYRILD 170
+D I D
Sbjct: 537 HDDTILIWD 545
Score = 153 (58.9 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 43/156 (27%), Positives = 79/156 (50%)
Query: 103 VFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSY 162
V+C+ ++ Q +IVS + TI+IWD T +C ++L H+ V + + D +I+T S
Sbjct: 270 VYCLQYDDQ--KIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQY--DERVIITGSS 325
Query: 163 DGLYRILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGK 222
D R+ D +T L+ + L L ++ ++ + + + ++S +T +
Sbjct: 326 DSTVRVWDVNTGEMLNTLIHHCEAVLHL-RFNNGMMVTCSKDRSIAVWDMASPTDITLRR 384
Query: 223 YIVSHRDPVISVASHPAKNII-ASGALDNDRTMKIW 257
+V HR ++V K I+ ASG DRT+K+W
Sbjct: 385 VLVGHR-AAVNVVDFDDKYIVSASG----DRTIKVW 415
>MGI|MGI:1917493 [details] [associations]
symbol:Wdr61 "WD repeat domain 61" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=ISO]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISO] [GO:0035327
"transcriptionally active chromatin" evidence=ISO] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISO] [GO:0055087
"Ski complex" evidence=ISO] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISO] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1917493 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309554 EMBL:AK012342 EMBL:AK013114
EMBL:AK142498 EMBL:AK153862 EMBL:AK167706 EMBL:BC023026
IPI:IPI00112320 RefSeq:NP_001020546.1 RefSeq:NP_075680.1
UniGene:Mm.28437 ProteinModelPortal:Q9ERF3 SMR:Q9ERF3 IntAct:Q9ERF3
PhosphoSite:Q9ERF3 PaxDb:Q9ERF3 PRIDE:Q9ERF3
Ensembl:ENSMUST00000051822 Ensembl:ENSMUST00000121204 GeneID:66317
KEGG:mmu:66317 InParanoid:Q9ERF3 NextBio:321305 Bgee:Q9ERF3
CleanEx:MM_WDR61 Genevestigator:Q9ERF3
GermOnline:ENSMUSG00000061559 Uniprot:Q9ERF3
Length = 305
Score = 156 (60.0 bits), Expect = 7.0e-11, Sum P(2) = 7.0e-11
Identities = 48/177 (27%), Positives = 77/177 (43%)
Query: 15 LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFT-GHE 73
L +L GH V V SH + SSS + + + L + S P+ +T
Sbjct: 56 LQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQMKSIDAGPVDAWTLAFS 115
Query: 74 QGISDLAT------IRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIW 127
LAT + ++ V + +L ++ I ++P + S + I I+
Sbjct: 116 PDSQYLATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIF 175
Query: 128 DIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTL 184
DI TGK L L H+ P+ ++ F+ D ++VT+S DG +I D N L GTL
Sbjct: 176 DIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHAN----LAGTL 228
Score = 144 (55.7 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 36/149 (24%), Positives = 72/149 (48%)
Query: 29 VKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTP--PSPLQK--FTGHEQGI---SDLAT 81
+ +S DG+ L S + + + + +++ + P++ F+ Q + SD
Sbjct: 154 IAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGY 213
Query: 82 IRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAH 141
I+++DV A TL GH ++V + F P VS + ++++++WD+ T C+ H
Sbjct: 214 IKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCIHTFFDH 273
Query: 142 SDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
D V + +N +G+ IV+ D + D
Sbjct: 274 QDQVWGVKYNGNGSKIVSVGDDQEIHVYD 302
Score = 119 (46.9 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 37/125 (29%), Positives = 58/125 (46%)
Query: 50 YSLSSISNFD-STPPSPLQKFTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINF 108
YSL + F S SP K+ G D I ++D+ T L TL GH + + F
Sbjct: 142 YSLDTRGKFILSIAYSPDGKYLA--SGAID-GIINIFDIATGKLLHTLEGHAMPIRSLTF 198
Query: 109 NPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRI 168
+P S +V+ + + I+I+D++ L H+ V + F D T V+SS D ++
Sbjct: 199 SPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKV 258
Query: 169 LDAST 173
D T
Sbjct: 259 WDVGT 263
Score = 48 (22.0 bits), Expect = 7.0e-11, Sum P(2) = 7.0e-11
Identities = 13/59 (22%), Positives = 27/59 (45%)
Query: 171 ASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRD 229
A P+ + + D ++++W+ TR + T+ + + + + NG IVS D
Sbjct: 239 AFCPDDTHFVSSSSDKSVKVWDVGTRTCIHTFFDHQDQVWGVKYN---GNGSKIVSVGD 294
>UNIPROTKB|G4MXN3 [details] [associations]
symbol:MGG_01259 "Pre-mRNA splicing factor" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 KO:K12662 RefSeq:XP_003714171.1
ProteinModelPortal:G4MXN3 EnsemblFungi:MGG_01259T0 GeneID:2679643
KEGG:mgr:MGG_01259 Uniprot:G4MXN3
Length = 531
Score = 160 (61.4 bits), Expect = 7.2e-11, Sum P(2) = 7.2e-11
Identities = 44/161 (27%), Positives = 80/161 (49%)
Query: 36 RLLTSSSAEKTL-LTYSLSSISNFDSTPPSPLQKFTGHEQGISDLAT------IRLWDVP 88
+L + + ++T+ L + +S P + LQ+ + ++ LAT + LW +
Sbjct: 231 KLFSIPNLDETMNLRGHTNKVSGMCWFPGATLQESNVSAESVN-LATGGAEGQVNLWSLS 289
Query: 89 TATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAI 148
T L TL GHT V ++F+P + S + + + R+WD++ L + HS V A+
Sbjct: 290 QDTPLATLSGHTQRVCRVDFHPSGRFLASASEDTSWRLWDVEKRTELLLQEGHSRGVFAV 349
Query: 149 DFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLR 189
FN DG+++ ++ D + RI D T IL G +D ++
Sbjct: 350 SFNGDGSLLASAGQDSIGRIWDLRTGRTIMILDGHMDGHIK 390
Score = 156 (60.0 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 32/92 (34%), Positives = 51/92 (55%)
Query: 83 RLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHS 142
RLWDV T L GH+ VF ++FN + + S + RIWD++TG+ + +L H
Sbjct: 326 RLWDVEKRTELLLQEGHSRGVFAVSFNGDGSLLASAGQDSIGRIWDLRTGRTIMILDGHM 385
Query: 143 D----PVTAIDFNRDGTMIVTSSYDGLYRILD 170
D P+ A+D+ DG ++++S DG + D
Sbjct: 386 DGHIKPIYALDWGSDGHRVLSASADGWIKCWD 417
Score = 53 (23.7 bits), Expect = 7.2e-11, Sum P(2) = 7.2e-11
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 227 HRDPVISV-ASHPAKNIIASGALDNDRTMKIW 257
H PV SV S + I++ G +DRT+K+W
Sbjct: 495 HTGPVASVDVSRDGRWIVSGG---HDRTVKLW 523
>UNIPROTKB|F1P1L6 [details] [associations]
symbol:AAMP "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0009986 "cell surface" evidence=IEA] [GO:0014909
"smooth muscle cell migration" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009986 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GeneTree:ENSGT00690000102167 GO:GO:0014909 EMBL:AADN02016792
IPI:IPI00586339 Ensembl:ENSGALT00000018663 ArrayExpress:F1P1L6
Uniprot:F1P1L6
Length = 408
Score = 156 (60.0 bits), Expect = 7.2e-11, Sum P(2) = 7.2e-11
Identities = 47/176 (26%), Positives = 80/176 (45%)
Query: 20 NGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGHEQ----- 74
+GH +V+ FSHD + + + + + + S L+ H Q
Sbjct: 105 SGHKDSVTCAGFSHDSVFVATGDMSGLIKVWRVDTKEEAWSFEVGDLEWMEWHPQAHVLL 164
Query: 75 -GISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGK 133
G +D +W +P+ KT G C P R V + T+RIWD+K G
Sbjct: 165 AGTAD-GNSWMWKIPSG-DCKTFQGPACPATCGKILPDGKRAVVGYEDGTMRIWDLKQGT 222
Query: 134 CLKVLPA---HSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDN 186
L VL H DP+T + N+DG++I+T S D ++++++T GK + V +++
Sbjct: 223 SLHVLKGQDGHQDPLTCVASNQDGSLILTGSVDCHAKLVNSAT--GKVVCVFKMES 276
Score = 105 (42.0 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 23/89 (25%), Positives = 42/89 (47%)
Query: 99 HTNYVFCINFNPQSNRI-VSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMI 157
H+ VFC++ +P++N + V+ ++ +W + G+ L H D VT F+ D +
Sbjct: 64 HSASVFCVSLDPKTNTLAVTGGEDDKAFVWRLSDGELLFECSGHKDSVTCAGFSHDSVFV 123
Query: 158 VTSSYDGLYRILDASTPNGKFIL-VGTLD 185
T GL ++ T + VG L+
Sbjct: 124 ATGDMSGLIKVWRVDTKEEAWSFEVGDLE 152
Score = 54 (24.1 bits), Expect = 7.2e-11, Sum P(2) = 7.2e-11
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 175 NGKFILVGTLDNTLRLWNYSTRKILKTYSGYT 206
N + +LD +RLW+ + K++ Y G++
Sbjct: 343 NSAVVYTCSLDGAVRLWDARSGKMISEYRGHS 374
Score = 50 (22.7 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 9/23 (39%), Positives = 17/23 (73%)
Query: 227 HRDPVISVASHPAKNIIASGALD 249
H+DP+ VAS+ ++I +G++D
Sbjct: 233 HQDPLTCVASNQDGSLILTGSVD 255
>UNIPROTKB|F1ND84 [details] [associations]
symbol:AAMP "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0009986 "cell surface" evidence=IEA] [GO:0014909
"smooth muscle cell migration" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009986 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GeneTree:ENSGT00690000102167 OMA:VWSFEVG GO:GO:0014909
EMBL:AADN02016792 IPI:IPI00821947 Ensembl:ENSGALT00000038174
ArrayExpress:F1ND84 Uniprot:F1ND84
Length = 411
Score = 156 (60.0 bits), Expect = 7.4e-11, Sum P(2) = 7.4e-11
Identities = 47/176 (26%), Positives = 80/176 (45%)
Query: 20 NGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGHEQ----- 74
+GH +V+ FSHD + + + + + + S L+ H Q
Sbjct: 108 SGHKDSVTCAGFSHDSVFVATGDMSGLIKVWRVDTKEEAWSFEVGDLEWMEWHPQAHVLL 167
Query: 75 -GISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGK 133
G +D +W +P+ KT G C P R V + T+RIWD+K G
Sbjct: 168 AGTAD-GNSWMWKIPSG-DCKTFQGPACPATCGKILPDGKRAVVGYEDGTMRIWDLKQGT 225
Query: 134 CLKVLPA---HSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDN 186
L VL H DP+T + N+DG++I+T S D ++++++T GK + V +++
Sbjct: 226 SLHVLKGQDGHQDPLTCVASNQDGSLILTGSVDCHAKLVNSAT--GKVVCVFKMES 279
Score = 105 (42.0 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 23/89 (25%), Positives = 42/89 (47%)
Query: 99 HTNYVFCINFNPQSNRI-VSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMI 157
H+ VFC++ +P++N + V+ ++ +W + G+ L H D VT F+ D +
Sbjct: 67 HSASVFCVSLDPKTNTLAVTGGEDDKAFVWRLSDGELLFECSGHKDSVTCAGFSHDSVFV 126
Query: 158 VTSSYDGLYRILDASTPNGKFIL-VGTLD 185
T GL ++ T + VG L+
Sbjct: 127 ATGDMSGLIKVWRVDTKEEAWSFEVGDLE 155
Score = 54 (24.1 bits), Expect = 7.4e-11, Sum P(2) = 7.4e-11
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 175 NGKFILVGTLDNTLRLWNYSTRKILKTYSGYT 206
N + +LD +RLW+ + K++ Y G++
Sbjct: 346 NSAVVYTCSLDGAVRLWDARSGKMISEYRGHS 377
Score = 50 (22.7 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 9/23 (39%), Positives = 17/23 (73%)
Query: 227 HRDPVISVASHPAKNIIASGALD 249
H+DP+ VAS+ ++I +G++D
Sbjct: 236 HQDPLTCVASNQDGSLILTGSVD 258
>UNIPROTKB|E2RDC4 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA] [GO:0061136 "regulation of proteasomal
protein catabolic process" evidence=IEA] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945 KO:K03362
OMA:NAYLKPM GeneTree:ENSGT00690000101849 EMBL:AAEX03015480
EMBL:AAEX03015479 RefSeq:XP_543980.3 ProteinModelPortal:E2RDC4
Ensembl:ENSCAFT00000015696 GeneID:486851 KEGG:cfa:486851
NextBio:20860562 Uniprot:E2RDC4
Length = 605
Score = 174 (66.3 bits), Expect = 7.7e-11, P = 7.7e-11
Identities = 53/184 (28%), Positives = 94/184 (51%)
Query: 2 SSDRSLESFRPYT--LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFD 59
SSD ++ + T + TL H AV +++F++ G ++T S ++++ + ++S + D
Sbjct: 360 SSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNN-GMMVTCSK-DRSIAVWDMASPT--D 415
Query: 60 STPPSPLQKFTGHEQGIS--DL-----------ATIRLWDVPTATSLKTLIGHTNYVFCI 106
T L GH ++ D TI++W+ T ++TL GH + C+
Sbjct: 416 ITLRRVL---VGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACL 472
Query: 107 NFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLY 166
+ + +VS + + TIR+WDI+ G CL+VL H + V I F D IV+ +YDG
Sbjct: 473 QY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKI 528
Query: 167 RILD 170
++ D
Sbjct: 529 KVWD 532
Score = 167 (63.8 bits), Expect = 5.9e-10, P = 5.9e-10
Identities = 51/189 (26%), Positives = 94/189 (49%)
Query: 75 GISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKC 134
G+ D TI++WD T + L GHT V C+ ++ + I++ + + T+R+WD+ TG+
Sbjct: 319 GLRD-NTIKIWDKSTLECKRILTGHTGSVLCLQYDERV--IITGSSDSTVRVWDVNTGEM 375
Query: 135 LKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNG---KFILVGTLDNTLRLW 191
L L H + V + FN +G M+VT S D + D ++P + +LVG + +
Sbjct: 376 LNTLIHHCEAVLHLRFN-NG-MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA-AVNVV 432
Query: 192 NYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDND 251
++ + I+ SG K +ST + + H+ + + ++ SG+ DN
Sbjct: 433 DFDDKYIVSA-SGDRTIKVWNTSTCEFV--RTLNGHKRGIACLQYRD--RLVVSGSSDN- 486
Query: 252 RTMKIWTQE 260
T+++W E
Sbjct: 487 -TIRLWDIE 494
Score = 164 (62.8 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 62/189 (32%), Positives = 90/189 (47%)
Query: 2 SSDRSL---ESFRP--YTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSIS 56
S DRS+ + P TL + L GH AV+ V F D + + S+S ++T+ ++ S+
Sbjct: 400 SKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCE 457
Query: 57 -----NFDSTPPSPLQ-KFTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNP 110
N + LQ + G SD TIRLWD+ L+ L GH V CI F+
Sbjct: 458 FVRTLNGHKRGIACLQYRDRLVVSGSSD-NTIRLWDIECGACLRVLEGHEELVRCIRFD- 515
Query: 111 QSNRIVSDTFNETIRIWDI--------KTGK-CLKVLPAHSDPVTAIDFNRDGTMIVTSS 161
+ RIVS ++ I++WD+ G CL+ L HS V + F D IV+SS
Sbjct: 516 -NKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSS 572
Query: 162 YDGLYRILD 170
+D I D
Sbjct: 573 HDDTILIWD 581
Score = 153 (58.9 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 43/156 (27%), Positives = 79/156 (50%)
Query: 103 VFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSY 162
V+C+ ++ Q +IVS + TI+IWD T +C ++L H+ V + + D +I+T S
Sbjct: 306 VYCLQYDDQ--KIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQY--DERVIITGSS 361
Query: 163 DGLYRILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGK 222
D R+ D +T L+ + L L ++ ++ + + + ++S +T +
Sbjct: 362 DSTVRVWDVNTGEMLNTLIHHCEAVLHL-RFNNGMMVTCSKDRSIAVWDMASPTDITLRR 420
Query: 223 YIVSHRDPVISVASHPAKNII-ASGALDNDRTMKIW 257
+V HR ++V K I+ ASG DRT+K+W
Sbjct: 421 VLVGHR-AAVNVVDFDDKYIVSASG----DRTIKVW 451
>UNIPROTKB|Q9Y297 [details] [associations]
symbol:BTRC "F-box/WD repeat-containing protein 1A"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0033598
"mammary gland epithelial cell proliferation" evidence=IEA]
[GO:0042753 "positive regulation of circadian rhythm" evidence=IEA]
[GO:0043122 "regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0031648 "protein destabilization" evidence=IMP] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0045862 "positive
regulation of proteolysis" evidence=IMP] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0016032
"viral reproduction" evidence=TAS] [GO:0031145 "anaphase-promoting
complex-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=TAS] [GO:0051437 "positive regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0051439 "regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=TAS] [GO:0045879 "negative regulation of
smoothened signaling pathway" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0045892 Reactome:REACT_115566 GO:GO:0019048 GO:GO:0007165
GO:GO:0045893 GO:GO:0016032 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016874 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0016567
GO:GO:0051726 GO:GO:0043433 GO:GO:0019005 GO:GO:0045862
GO:GO:0000209 GO:GO:0031145 GO:GO:0051437 GO:GO:0071407
Reactome:REACT_24941 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0045879 GO:GO:0042753 PDB:1P22
PDBsum:1P22 EMBL:AL627424 EMBL:AF101784 EMBL:Y14153 EMBL:AF129530
EMBL:GU727631 EMBL:AK313353 EMBL:AL133387 EMBL:AL445463
EMBL:BC027994 IPI:IPI00307418 IPI:IPI00413142 RefSeq:NP_003930.1
RefSeq:NP_378663.1 UniGene:Hs.643802 UniGene:Hs.713753 PDB:2P64
PDBsum:2P64 ProteinModelPortal:Q9Y297 SMR:Q9Y297 DIP:DIP-31607N
IntAct:Q9Y297 MINT:MINT-108636 STRING:Q9Y297 PhosphoSite:Q9Y297
DMDM:13124271 PRIDE:Q9Y297 DNASU:8945 Ensembl:ENST00000370187
Ensembl:ENST00000408038 GeneID:8945 KEGG:hsa:8945 UCSC:uc001kta.3
UCSC:uc001ktb.3 CTD:8945 GeneCards:GC10P103103 HGNC:HGNC:1144
HPA:CAB032986 MIM:603482 neXtProt:NX_Q9Y297 PharmGKB:PA25465
HOGENOM:HOG000006638 HOVERGEN:HBG002521 InParanoid:Q9Y297 KO:K03362
OMA:NAYLKPM OrthoDB:EOG4F1X2M PhylomeDB:Q9Y297 ChiTaRS:BTRC
EvolutionaryTrace:Q9Y297 GenomeRNAi:8945 NextBio:33645
ArrayExpress:Q9Y297 Bgee:Q9Y297 CleanEx:HS_BTRC
Genevestigator:Q9Y297 Uniprot:Q9Y297
Length = 605
Score = 174 (66.3 bits), Expect = 7.7e-11, P = 7.7e-11
Identities = 53/184 (28%), Positives = 94/184 (51%)
Query: 2 SSDRSLESFRPYT--LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFD 59
SSD ++ + T + TL H AV +++F++ G ++T S ++++ + ++S + D
Sbjct: 360 SSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNN-GMMVTCSK-DRSIAVWDMASPT--D 415
Query: 60 STPPSPLQKFTGHEQGIS--DL-----------ATIRLWDVPTATSLKTLIGHTNYVFCI 106
T L GH ++ D TI++W+ T ++TL GH + C+
Sbjct: 416 ITLRRVL---VGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACL 472
Query: 107 NFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLY 166
+ + +VS + + TIR+WDI+ G CL+VL H + V I F D IV+ +YDG
Sbjct: 473 QY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKI 528
Query: 167 RILD 170
++ D
Sbjct: 529 KVWD 532
Score = 166 (63.5 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 51/189 (26%), Positives = 94/189 (49%)
Query: 75 GISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKC 134
G+ D TI++WD T + L GHT V C+ ++ + I++ + + T+R+WD+ TG+
Sbjct: 319 GLRD-NTIKIWDKNTLECKRILTGHTGSVLCLQYDERV--IITGSSDSTVRVWDVNTGEM 375
Query: 135 LKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNG---KFILVGTLDNTLRLW 191
L L H + V + FN +G M+VT S D + D ++P + +LVG + +
Sbjct: 376 LNTLIHHCEAVLHLRFN-NG-MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA-AVNVV 432
Query: 192 NYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDND 251
++ + I+ SG K +ST + + H+ + + ++ SG+ DN
Sbjct: 433 DFDDKYIVSA-SGDRTIKVWNTSTCEFV--RTLNGHKRGIACLQYRD--RLVVSGSSDN- 486
Query: 252 RTMKIWTQE 260
T+++W E
Sbjct: 487 -TIRLWDIE 494
Score = 164 (62.8 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 62/189 (32%), Positives = 90/189 (47%)
Query: 2 SSDRSL---ESFRP--YTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSIS 56
S DRS+ + P TL + L GH AV+ V F D + + S+S ++T+ ++ S+
Sbjct: 400 SKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCE 457
Query: 57 -----NFDSTPPSPLQ-KFTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNP 110
N + LQ + G SD TIRLWD+ L+ L GH V CI F+
Sbjct: 458 FVRTLNGHKRGIACLQYRDRLVVSGSSD-NTIRLWDIECGACLRVLEGHEELVRCIRFD- 515
Query: 111 QSNRIVSDTFNETIRIWDI--------KTGK-CLKVLPAHSDPVTAIDFNRDGTMIVTSS 161
+ RIVS ++ I++WD+ G CL+ L HS V + F D IV+SS
Sbjct: 516 -NKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSS 572
Query: 162 YDGLYRILD 170
+D I D
Sbjct: 573 HDDTILIWD 581
Score = 153 (58.9 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 43/156 (27%), Positives = 79/156 (50%)
Query: 103 VFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSY 162
V+C+ ++ Q +IVS + TI+IWD T +C ++L H+ V + + D +I+T S
Sbjct: 306 VYCLQYDDQ--KIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSS 361
Query: 163 DGLYRILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGK 222
D R+ D +T L+ + L L ++ ++ + + + ++S +T +
Sbjct: 362 DSTVRVWDVNTGEMLNTLIHHCEAVLHL-RFNNGMMVTCSKDRSIAVWDMASPTDITLRR 420
Query: 223 YIVSHRDPVISVASHPAKNII-ASGALDNDRTMKIW 257
+V HR ++V K I+ ASG DRT+K+W
Sbjct: 421 VLVGHR-AAVNVVDFDDKYIVSASG----DRTIKVW 451
>UNIPROTKB|G4MUR7 [details] [associations]
symbol:MGG_08829 "Transcriptional repressor rco-1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
KO:K06666 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
RefSeq:XP_003713847.1 ProteinModelPortal:G4MUR7 SMR:G4MUR7
EnsemblFungi:MGG_08829T0 GeneID:2679815 KEGG:mgr:MGG_08829
Uniprot:G4MUR7
Length = 607
Score = 174 (66.3 bits), Expect = 7.8e-11, P = 7.8e-11
Identities = 55/199 (27%), Positives = 86/199 (43%)
Query: 82 IRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAH 141
IR+WD+ T T GH ++ ++F I S + + T+R+WDI+ G L V
Sbjct: 370 IRVWDITTRTIRIQFAGHEQDIYSLDFARDGRTIASGSGDRTVRLWDIENGTALTVFTIE 429
Query: 142 SDPVTAIDFNRDGTMIVTSSYDGLYRILD-----------------------ASTPNGKF 178
D VT + + D + S D R+ D A +PNG+
Sbjct: 430 -DGVTTVAISPDTKYVAAGSLDKSVRVWDLTQGCPVERLEGPDGHKDSVYSVAFSPNGRD 488
Query: 179 ILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHP 238
++ G+LD T++LW +T + G + C+ TF HRD V+SVA P
Sbjct: 489 LVTGSLDKTIKLWELATPRGNMQNQGSKGGR-CVK-TFE--------GHRDFVLSVALTP 538
Query: 239 AKNIIASGALDNDRTMKIW 257
+ SG+ DR ++ W
Sbjct: 539 DNQWVMSGS--KDRGVQFW 555
Score = 144 (55.7 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 44/205 (21%), Positives = 94/205 (45%)
Query: 21 GHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSL---SSISNF---DSTPPSPLQKFTGHEQ 74
GH + + + F+ DGR + S S ++T+ + + ++++ F D + T +
Sbjct: 386 GHEQDIYSLDFARDGRTIASGSGDRTVRLWDIENGTALTVFTIEDGVTTVAISPDTKYVA 445
Query: 75 GISDLATIRLWDVPTATSLKTLIG---HTNYVFCINFNPQSNRIVSDTFNETIRIWDIKT 131
S ++R+WD+ ++ L G H + V+ + F+P +V+ + ++TI++W++ T
Sbjct: 446 AGSLDKSVRVWDLTQGCPVERLEGPDGHKDSVYSVAFSPNGRDLVTGSLDKTIKLWELAT 505
Query: 132 ------------GKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFI 179
G+C+K H D V ++ D +++ S D + D T + + +
Sbjct: 506 PRGNMQNQGSKGGRCVKTFEGHRDFVLSVALTPDNQWVMSGSKDRGVQFWDPRTGSTQLM 565
Query: 180 LVGTLDNTLRLWNYSTRKILKTYSG 204
L G ++ + + T T SG
Sbjct: 566 LQGHKNSVISVAPSPTGGFFATGSG 590
Score = 143 (55.4 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 44/191 (23%), Positives = 90/191 (47%)
Query: 81 TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVL-- 138
T+RLWD+ T+L T+ + V + +P + + + + ++++R+WD+ G ++ L
Sbjct: 411 TVRLWDIENGTAL-TVFTIEDGVTTVAISPDTKYVAAGSLDKSVRVWDLTQGCPVERLEG 469
Query: 139 P-AHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYSTRK 197
P H D V ++ F+ +G +VT S D ++ + +TP G G+ R
Sbjct: 470 PDGHKDSVYSVAFSPNGRDLVTGSLDKTIKLWELATPRGNMQNQGSKGGRCVKTFEGHRD 529
Query: 198 ILKTYSGYTNSKYCISST-------FSVTNGK---YIVSHRDPVISVASHPAKNIIASGA 247
+ + + ++++ +S + + G + H++ VISVA P A+G+
Sbjct: 530 FVLSVALTPDNQWVMSGSKDRGVQFWDPRTGSTQLMLQGHKNSVISVAPSPTGGFFATGS 589
Query: 248 LDNDRTMKIWT 258
D +IW+
Sbjct: 590 --GDMRARIWS 598
Score = 129 (50.5 bits), Expect = 9.5e-07, Sum P(2) = 9.5e-07
Identities = 47/169 (27%), Positives = 71/169 (42%)
Query: 15 LTQTLNGHLRAVSYVKFSHDGRLLTSS---SAE----KTLLTYSLSSISNFDSTPPSPLQ 67
L TL H V V+FS DG+ + + SA+ T + N D+T ++
Sbjct: 292 LVHTLQ-HESVVCCVRFSADGKYVATGCNRSAQIFDVNTGEKVCVLQDDNADTTGDLYIR 350
Query: 68 KFTGHEQGISDLAT------IRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFN 121
G LAT IR+WD+ T T GH ++ ++F I S + +
Sbjct: 351 SVCFSPDG-KYLATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSLDFARDGRTIASGSGD 409
Query: 122 ETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
T+R+WDI+ G L V D VT + + D + S D R+ D
Sbjct: 410 RTVRLWDIENGTALTVFTIE-DGVTTVAISPDTKYVAAGSLDKSVRVWD 457
Score = 52 (23.4 bits), Expect = 9.5e-07, Sum P(2) = 9.5e-07
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 171 ASTPNGKFILVGTLDNTLRLWNYS 194
A +P G F G+ D R+W+Y+
Sbjct: 577 APSPTGGFFATGSGDMRARIWSYT 600
>UNIPROTKB|Q13685 [details] [associations]
symbol:AAMP "Angio-associated migratory cell protein"
species:9606 "Homo sapiens" [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0014909 "smooth muscle cell
migration" evidence=IEP] [GO:0010595 "positive regulation of
endothelial cell migration" evidence=ISS] [GO:0009986 "cell
surface" evidence=IDA] [GO:0001525 "angiogenesis" evidence=NAS]
[GO:0008201 "heparin binding" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0005737
GO:GO:0009986 GO:GO:0030154 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0008201
CTD:14 HOGENOM:HOG000261676 HOVERGEN:HBG061307 OrthoDB:EOG4D26PX
GO:GO:0001525 GO:GO:0010595 GO:GO:0014909 EMBL:M95627 EMBL:CR456755
EMBL:BC008809 EMBL:BC020244 EMBL:BC039866 IPI:IPI00014481
PIR:I39383 RefSeq:NP_001078.2 UniGene:Hs.83347
ProteinModelPortal:Q13685 SMR:Q13685 IntAct:Q13685
MINT:MINT-1418005 STRING:Q13685 PhosphoSite:Q13685 DMDM:62906874
PaxDb:Q13685 PRIDE:Q13685 Ensembl:ENST00000248450 GeneID:14
KEGG:hsa:14 UCSC:uc002vhk.3 GeneCards:GC02M219092 HGNC:HGNC:18
HPA:CAB017717 MIM:603488 neXtProt:NX_Q13685 PharmGKB:PA24365
InParanoid:Q13685 ChiTaRS:AAMP GenomeRNAi:14 NextBio:31
ArrayExpress:Q13685 Bgee:Q13685 CleanEx:HS_AAMP
Genevestigator:Q13685 GermOnline:ENSG00000127837 Uniprot:Q13685
Length = 434
Score = 154 (59.3 bits), Expect = 8.3e-11, Sum P(2) = 8.3e-11
Identities = 49/168 (29%), Positives = 74/168 (44%)
Query: 21 GHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGHEQ------ 74
GH +V+ FSHD L+ + L + + + S L+ H +
Sbjct: 132 GHKDSVTCAGFSHDSTLVATGDMSGLLKVWQVDTKEEVWSFEAGDLEWMEWHPRAPVLLA 191
Query: 75 GISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKC 134
G +D T +W VP KT G C P R V + TIRIWD+K G
Sbjct: 192 GTADGNTW-MWKVPNG-DCKTFQGPNCPATCGRVLPDGKRAVVGYEDGTIRIWDLKQGSP 249
Query: 135 LKVLPA---HSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFI 179
+ VL H P+T + N+DG++I+T S D +++ A+T GK +
Sbjct: 250 IHVLKGTEGHQGPLTCVAANQDGSLILTGSVDCQAKLVSATT--GKVV 295
Score = 113 (44.8 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 21/76 (27%), Positives = 39/76 (51%)
Query: 99 HTNYVFCINFNPQSNRI-VSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMI 157
H+ VFC++ +P++N + V+ ++ +W + G+ L H D VT F+ D T++
Sbjct: 90 HSASVFCVSLDPKTNTLAVTGGEDDKAFVWRLSDGELLFECAGHKDSVTCAGFSHDSTLV 149
Query: 158 VTSSYDGLYRILDAST 173
T GL ++ T
Sbjct: 150 ATGDMSGLLKVWQVDT 165
Score = 62 (26.9 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 14/44 (31%), Positives = 24/44 (54%)
Query: 174 PNGKFILVGTLDNTLRLWNY---STRKILKTYSGYTNSKYCISS 214
P+GK +VG D T+R+W+ S +LK G+ C+++
Sbjct: 225 PDGKRAVVGYEDGTIRIWDLKQGSPIHVLKGTEGHQGPLTCVAA 268
Score = 57 (25.1 bits), Expect = 8.3e-11, Sum P(2) = 8.3e-11
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 183 TLDNTLRLWNYSTRKILKTYSGYT 206
+LD +RLW+ T ++L Y G+T
Sbjct: 377 SLDGIVRLWDARTGRLLTDYRGHT 400
Score = 40 (19.1 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 9/31 (29%), Positives = 12/31 (38%)
Query: 174 PNGKFILVGTLDNTLRLWNYSTRKILKTYSG 204
P +L GT D +W KT+ G
Sbjct: 184 PRAPVLLAGTADGNTWMWKVPNGDC-KTFQG 213
>UNIPROTKB|Q5RCG7 [details] [associations]
symbol:AAMP "Angio-associated migratory cell protein"
species:9601 "Pongo abelii" [GO:0009986 "cell surface"
evidence=ISS] [GO:0010595 "positive regulation of endothelial cell
migration" evidence=ISS] [GO:0014909 "smooth muscle cell migration"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005886 GO:GO:0005737 GO:GO:0009986
GO:GO:0030154 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 CTD:14 GeneTree:ENSGT00690000102167
HOVERGEN:HBG061307 OrthoDB:EOG4D26PX GO:GO:0001525 GO:GO:0010595
GO:GO:0014909 EMBL:CR858303 EMBL:CR859206 RefSeq:NP_001125288.1
UniGene:Pab.19266 ProteinModelPortal:Q5RCG7
Ensembl:ENSPPYT00000015307 GeneID:100172186 KEGG:pon:100172186
InParanoid:Q5RCG7 Uniprot:Q5RCG7
Length = 434
Score = 154 (59.3 bits), Expect = 8.3e-11, Sum P(2) = 8.3e-11
Identities = 49/168 (29%), Positives = 74/168 (44%)
Query: 21 GHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGHEQ------ 74
GH +V+ FSHD L+ + L + + + S L+ H +
Sbjct: 132 GHKDSVTCAGFSHDSTLVATGDMSGLLKVWQVDTKEEVWSFEAGDLEWMEWHPRAPVLLA 191
Query: 75 GISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKC 134
G +D T +W VP KT G C P R V + TIRIWD+K G
Sbjct: 192 GTADGNTW-MWKVPNG-DCKTFQGPNCPATCGRVLPDGKRAVVGYEDGTIRIWDLKQGSP 249
Query: 135 LKVLPA---HSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFI 179
+ VL H P+T + N+DG++I+T S D +++ A+T GK +
Sbjct: 250 IHVLKGTEGHQGPLTCVATNQDGSLILTGSVDCQAKLVSATT--GKVV 295
Score = 113 (44.8 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 21/76 (27%), Positives = 39/76 (51%)
Query: 99 HTNYVFCINFNPQSNRI-VSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMI 157
H+ VFC++ +P++N + V+ ++ +W + G+ L H D VT F+ D T++
Sbjct: 90 HSASVFCVSLDPKTNTLAVTGGEDDKAFVWRLSDGELLFECAGHKDSVTCAGFSHDSTLV 149
Query: 158 VTSSYDGLYRILDAST 173
T GL ++ T
Sbjct: 150 ATGDMSGLLKVWQVDT 165
Score = 62 (26.9 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 14/44 (31%), Positives = 24/44 (54%)
Query: 174 PNGKFILVGTLDNTLRLWNY---STRKILKTYSGYTNSKYCISS 214
P+GK +VG D T+R+W+ S +LK G+ C+++
Sbjct: 225 PDGKRAVVGYEDGTIRIWDLKQGSPIHVLKGTEGHQGPLTCVAT 268
Score = 57 (25.1 bits), Expect = 8.3e-11, Sum P(2) = 8.3e-11
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 183 TLDNTLRLWNYSTRKILKTYSGYT 206
+LD +RLW+ T ++L Y G+T
Sbjct: 377 SLDGIVRLWDARTGRLLTDYRGHT 400
Score = 40 (19.1 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 9/31 (29%), Positives = 12/31 (38%)
Query: 174 PNGKFILVGTLDNTLRLWNYSTRKILKTYSG 204
P +L GT D +W KT+ G
Sbjct: 184 PRAPVLLAGTADGNTWMWKVPNGDC-KTFQG 213
>UNIPROTKB|E1BEN8 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377 KO:K03130
CTD:6877 OMA:ERQNNQI EMBL:DAAA02059036 IPI:IPI00698152
RefSeq:NP_001178407.1 UniGene:Bt.59287 ProteinModelPortal:E1BEN8
Ensembl:ENSBTAT00000012808 GeneID:516001 KEGG:bta:516001
NextBio:20872090 Uniprot:E1BEN8
Length = 800
Score = 175 (66.7 bits), Expect = 8.5e-11, P = 8.5e-11
Identities = 50/179 (27%), Positives = 81/179 (45%)
Query: 19 LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSIS--------NFD--STPPSPLQK 68
L GH V FS D L SSS + T+ +SL + + N+ T SP
Sbjct: 539 LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGY 598
Query: 69 FT---GHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIR 125
+ GH++ RLW L+ GH V C F+P SN + + + + T+R
Sbjct: 599 YFVSGGHDR------VARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVR 652
Query: 126 IWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTL 184
+WD+ G C+++ H P+ ++ F+ +G + T + DG + D G ++VG L
Sbjct: 653 LWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDI----GHGLMVGEL 707
Score = 162 (62.1 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 63/244 (25%), Positives = 105/244 (43%)
Query: 19 LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGHEQGISD 78
LN + + ++ V + D L+ A+ T+ +S++ S + E SD
Sbjct: 467 LNAY-QGLTAVDVTDDSSLIAGGFADSTVRVWSVTP-KKLRSVKQAADLSLIDKE---SD 521
Query: 79 LATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVL 138
R+ D TA+ LK L GH+ V+ +F+P N ++S + + T+R+W ++T CL
Sbjct: 522 DVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGY 581
Query: 139 PAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYSTRKI 198
H+ PV F+ G V+ +D + R+ I G L + N TR
Sbjct: 582 KGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADV----N-CTR-- 634
Query: 199 LKTYSGY--TNSKYCISSTFSVTNGKYI---VSHRDPVISVASHPAKNIIASGALDNDRT 253
S Y T S + V NG + H+ P+ S+ P +A+GA D R
Sbjct: 635 FHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDG-RV 693
Query: 254 MKIW 257
+ +W
Sbjct: 694 L-LW 696
Score = 148 (57.2 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 29/97 (29%), Positives = 50/97 (51%)
Query: 75 GISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKC 134
G +D T+RLWDV ++ GH + + F+P + + + + +WDI G
Sbjct: 645 GSAD-RTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLM 703
Query: 135 LKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDA 171
+ L H+D V ++ F+RDG ++ + S D R+ DA
Sbjct: 704 VGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDA 740
Score = 137 (53.3 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 48/186 (25%), Positives = 76/186 (40%)
Query: 77 SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLK 136
S+ T+RLW + T T L GH V+ F+P VS + R+W + L+
Sbjct: 562 SEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLR 621
Query: 137 VLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYSTR 196
+ H V F+ + + T S D R+ D N I G L
Sbjct: 622 IFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNG 681
Query: 197 KILKTYSGYTNSKYCISST-FSVTNGKYIVSHRDPVISVASHPAKNIIASGALDNDRTMK 255
+ L T G T+ + + + G+ + H D V S+ I+ASG++DN T++
Sbjct: 682 RFLAT--GATDGRVLLWDIGHGLMVGE-LKGHTDTVCSLRFSRDGEILASGSMDN--TVR 736
Query: 256 IWTQEK 261
+W K
Sbjct: 737 LWDAVK 742
>UNIPROTKB|E2RE41 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0033276 "transcription factor TFTC
complex" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
EMBL:AAEX03015497 RefSeq:XP_003433663.1 Ensembl:ENSCAFT00000016513
GeneID:100688981 KEGG:cfa:100688981 Uniprot:E2RE41
Length = 801
Score = 175 (66.7 bits), Expect = 8.5e-11, P = 8.5e-11
Identities = 50/179 (27%), Positives = 81/179 (45%)
Query: 19 LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSIS--------NFD--STPPSPLQK 68
L GH V FS D L SSS + T+ +SL + + N+ T SP
Sbjct: 540 LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGY 599
Query: 69 FT---GHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIR 125
+ GH++ RLW L+ GH V C F+P SN + + + + T+R
Sbjct: 600 YFVSGGHDR------VARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVR 653
Query: 126 IWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTL 184
+WD+ G C+++ H P+ ++ F+ +G + T + DG + D G ++VG L
Sbjct: 654 LWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDI----GHGLMVGEL 708
Score = 162 (62.1 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 63/244 (25%), Positives = 105/244 (43%)
Query: 19 LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGHEQGISD 78
LN + + ++ V + D L+ A+ T+ +S++ S + E SD
Sbjct: 468 LNAY-QGLTAVDVTDDSSLIAGGFADSTVRVWSVTP-KKLRSVKQAADLSLIDKE---SD 522
Query: 79 LATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVL 138
R+ D TA+ LK L GH+ V+ +F+P N ++S + + T+R+W ++T CL
Sbjct: 523 DVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGY 582
Query: 139 PAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYSTRKI 198
H+ PV F+ G V+ +D + R+ I G L + N TR
Sbjct: 583 KGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADV----N-CTR-- 635
Query: 199 LKTYSGY--TNSKYCISSTFSVTNGKYI---VSHRDPVISVASHPAKNIIASGALDNDRT 253
S Y T S + V NG + H+ P+ S+ P +A+GA D R
Sbjct: 636 FHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDG-RV 694
Query: 254 MKIW 257
+ +W
Sbjct: 695 L-LW 697
Score = 148 (57.2 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 29/97 (29%), Positives = 50/97 (51%)
Query: 75 GISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKC 134
G +D T+RLWDV ++ GH + + F+P + + + + +WDI G
Sbjct: 646 GSAD-RTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLM 704
Query: 135 LKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDA 171
+ L H+D V ++ F+RDG ++ + S D R+ DA
Sbjct: 705 VGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDA 741
Score = 137 (53.3 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 48/186 (25%), Positives = 76/186 (40%)
Query: 77 SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLK 136
S+ T+RLW + T T L GH V+ F+P VS + R+W + L+
Sbjct: 563 SEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLR 622
Query: 137 VLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYSTR 196
+ H V F+ + + T S D R+ D N I G L
Sbjct: 623 IFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNG 682
Query: 197 KILKTYSGYTNSKYCISST-FSVTNGKYIVSHRDPVISVASHPAKNIIASGALDNDRTMK 255
+ L T G T+ + + + G+ + H D V S+ I+ASG++DN T++
Sbjct: 683 RFLAT--GATDGRVLLWDIGHGLMVGE-LKGHTDTVCSLRFSRDGEILASGSMDN--TVR 737
Query: 256 IWTQEK 261
+W K
Sbjct: 738 LWDAVK 743
>TAIR|locus:2050064 [details] [associations]
symbol:AT2G21390 species:3702 "Arabidopsis thaliana"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005215 "transporter activity" evidence=ISS] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISS] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030117 "membrane
coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IDA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0005829
"cytosol" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0006886
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC006841 GO:GO:0030126 HSSP:P63005
HOGENOM:HOG000195913 KO:K05236 ProtClustDB:CLSN2914500
InterPro:IPR016391 PIRSF:PIRSF003354 EMBL:AK228692 IPI:IPI00534598
PIR:F84600 RefSeq:NP_179734.1 UniGene:At.28070
ProteinModelPortal:Q9SJT9 SMR:Q9SJT9 STRING:Q9SJT9 PaxDb:Q9SJT9
PRIDE:Q9SJT9 EnsemblPlants:AT2G21390.1 GeneID:816678
KEGG:ath:AT2G21390 GeneFarm:3755 TAIR:At2g21390 InParanoid:Q9SJT9
OMA:GMENTDI PhylomeDB:Q9SJT9 Genevestigator:Q9SJT9 Uniprot:Q9SJT9
Length = 1218
Score = 163 (62.4 bits), Expect = 8.5e-11, Sum P(2) = 8.5e-11
Identities = 54/185 (29%), Positives = 89/185 (48%)
Query: 77 SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLK 136
SD TIR+W+ + T + L GH +YV C +F+P+ + +VS + ++T+R+WDI K
Sbjct: 112 SDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALKKKS 171
Query: 137 VLPAHSDPVTAIDFNRD--GTM--IVTSSYDGLYRILDAST--PNGKFILVGTLDNTLRL 190
PA D + N D G + IV +G R ++ ++ P I+ G D ++L
Sbjct: 172 ASPA-DDLMRFSQMNSDLFGGVDAIVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKL 230
Query: 191 WNYSTRKI--LKTYSGYTNSKYCISSTFSVTNGKYIVSH-RDPVISVASHPAKNIIASGA 247
W + K + T G+ N+ +SS IVS+ D I V + I +
Sbjct: 231 WRMNETKAWEVDTLRGHMNN---VSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGIQTFR 287
Query: 248 LDNDR 252
++DR
Sbjct: 288 REHDR 292
Score = 147 (56.8 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 29/89 (32%), Positives = 53/89 (59%)
Query: 82 IRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAH 141
I++W+ T L TL+GH +Y+ + F+ ++ IVS + ++TIRIW+ ++ C+ VL H
Sbjct: 75 IKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISVLTGH 134
Query: 142 SDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
+ V F+ ++V++S D R+ D
Sbjct: 135 NHYVMCASFHPKEDLVVSASLDQTVRVWD 163
Score = 122 (48.0 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 44/179 (24%), Positives = 82/179 (45%)
Query: 2 SSDRSLE--SFRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFD 59
S D+++ +++ T L GH V F L+ S+S ++T+ + + ++
Sbjct: 112 SDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALKKKS 171
Query: 60 STPPSPLQKFTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDT 119
++P L +F+ Q SDL + A L GH V +F+P IVS
Sbjct: 172 ASPADDLMRFS---QMNSDL-----FGGVDAIVKYVLEGHDRGVNWASFHPTLPLIVSGA 223
Query: 120 FNETIRIWDIKTGKCLKV--LPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNG 176
+ +++W + K +V L H + V+++ F+ +IV++S D R+ DA+ G
Sbjct: 224 DDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTG 282
Score = 121 (47.7 bits), Expect = 0.00034, P = 0.00034
Identities = 34/160 (21%), Positives = 75/160 (46%)
Query: 100 TNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVT 159
+N V ++F+P+ I++ + I++WD + G + H PV + F+ + V+
Sbjct: 9 SNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVS 68
Query: 160 SSYDGLYRILDASTPNGKFILVGTLD--NTLRLWNYSTRKILKTYSGYTNSKYCISSTFS 217
D ++ + T F L+G LD T++ +++ I+ T + S
Sbjct: 69 GGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQ-FHHENPWIVSASDDQTIRIWNWQSRTC 127
Query: 218 VTNGKYIVSHRDPVISVASHPAKNIIASGALDNDRTMKIW 257
++ + H V+ + HP ++++ S +LD +T+++W
Sbjct: 128 IS---VLTGHNHYVMCASFHPKEDLVVSASLD--QTVRVW 162
Score = 58 (25.5 bits), Expect = 8.5e-11, Sum P(2) = 8.5e-11
Identities = 12/46 (26%), Positives = 26/46 (56%)
Query: 9 SFRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS 54
+++ + TL GHL + V+F H+ + S+S ++T+ ++ S
Sbjct: 79 NYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQS 124
Score = 42 (19.8 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 234 VASHPAKNIIASGALDNDRTMKIWTQEKE 262
+A HP N++A+G +D M ++ E+E
Sbjct: 296 LAVHPEINLLAAG---HDNGMIVFKLERE 321
>UNIPROTKB|Q32LN7 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9913
"Bos taurus" [GO:0080182 "histone H3-K4 trimethylation"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:2001162 "positive regulation of histone H3-K79 methylation"
evidence=ISS] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=ISS] [GO:0045638 "negative regulation of
myeloid cell differentiation" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISS] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0080182
GO:GO:0016593 GO:GO:0045638 GO:GO:2001162
GeneTree:ENSGT00700000104507 GO:GO:0055087 EMBL:BC109495
IPI:IPI00695868 RefSeq:NP_001033186.1 UniGene:Bt.20040
ProteinModelPortal:Q32LN7 PRIDE:Q32LN7 Ensembl:ENSBTAT00000021203
GeneID:513208 KEGG:bta:513208 CTD:80349 HOGENOM:HOG000036765
HOVERGEN:HBG059813 InParanoid:Q32LN7 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW NextBio:20870747 Uniprot:Q32LN7
Length = 305
Score = 156 (60.0 bits), Expect = 8.9e-11, Sum P(2) = 8.9e-11
Identities = 48/177 (27%), Positives = 77/177 (43%)
Query: 15 LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFT-GHE 73
L +L GH V V SH + SSS + + + L + S P+ +T
Sbjct: 56 LQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFS 115
Query: 74 QGISDLAT------IRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIW 127
LAT + ++ V + +L ++ I ++P + S + I I+
Sbjct: 116 PDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIF 175
Query: 128 DIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTL 184
DI TGK L L H+ P+ ++ F+ D ++VT+S DG +I D N L GTL
Sbjct: 176 DIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHAN----LAGTL 228
Score = 144 (55.7 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 37/149 (24%), Positives = 72/149 (48%)
Query: 29 VKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTP--PSPLQK--FTGHEQGI---SDLAT 81
+ +S DG+ L S + + + + +++ + P++ F+ Q + SD
Sbjct: 154 IAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGY 213
Query: 82 IRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAH 141
I+++DV A TL GH ++V + F P VS + ++++++WD+ T C+ H
Sbjct: 214 IKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDH 273
Query: 142 SDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
D V + +N +G+ IV+ D I D
Sbjct: 274 QDQVWGVKYNGNGSKIVSVGDDQEIHIYD 302
Score = 119 (46.9 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 37/125 (29%), Positives = 58/125 (46%)
Query: 50 YSLSSISNFD-STPPSPLQKFTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINF 108
YSL + F S SP K+ G D I ++D+ T L TL GH + + F
Sbjct: 142 YSLDTRGKFILSIAYSPDGKYLA--SGAID-GIINIFDIATGKLLHTLEGHAMPIRSLTF 198
Query: 109 NPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRI 168
+P S +V+ + + I+I+D++ L H+ V + F D T V+SS D ++
Sbjct: 199 SPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKV 258
Query: 169 LDAST 173
D T
Sbjct: 259 WDVGT 263
Score = 47 (21.6 bits), Expect = 8.9e-11, Sum P(2) = 8.9e-11
Identities = 13/59 (22%), Positives = 27/59 (45%)
Query: 171 ASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRD 229
A P+ + + D ++++W+ TR + T+ + + + + NG IVS D
Sbjct: 239 AFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYN---GNGSKIVSVGD 294
>UNIPROTKB|Q9GZS3 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=IDA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0045638 "negative regulation of myeloid cell
differentiation" evidence=IDA] [GO:0055087 "Ski complex"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0035327 "transcriptionally active
chromatin" evidence=IDA] [GO:0051571 "positive regulation of
histone H3-K4 methylation" evidence=IMP] [GO:2001162 "positive
regulation of histone H3-K79 methylation" evidence=IMP] [GO:0080182
"histone H3-K4 trimethylation" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 EMBL:CH471136 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309553 EMBL:AF100786 EMBL:AF127799
EMBL:AK024754 EMBL:CR457333 EMBL:BC010080 IPI:IPI00019269
RefSeq:NP_079510.1 UniGene:Hs.513055 PDB:3OW8 PDBsum:3OW8
ProteinModelPortal:Q9GZS3 SMR:Q9GZS3 DIP:DIP-36672N IntAct:Q9GZS3
MINT:MINT-1376321 STRING:Q9GZS3 PhosphoSite:Q9GZS3 DMDM:74761365
PaxDb:Q9GZS3 PeptideAtlas:Q9GZS3 PRIDE:Q9GZS3 DNASU:80349
Ensembl:ENST00000267973 Ensembl:ENST00000558311 GeneID:80349
KEGG:hsa:80349 UCSC:uc002bdn.3 GeneCards:GC15M078575
HGNC:HGNC:30300 HPA:HPA039932 HPA:HPA040065 MIM:609540
neXtProt:NX_Q9GZS3 PharmGKB:PA142670595 InParanoid:Q9GZS3
PhylomeDB:Q9GZS3 ChiTaRS:WDR61 EvolutionaryTrace:Q9GZS3
GenomeRNAi:80349 NextBio:70956 Bgee:Q9GZS3 CleanEx:HS_WDR61
Genevestigator:Q9GZS3 GermOnline:ENSG00000140395 Uniprot:Q9GZS3
Length = 305
Score = 156 (60.0 bits), Expect = 8.9e-11, Sum P(2) = 8.9e-11
Identities = 48/177 (27%), Positives = 77/177 (43%)
Query: 15 LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFT-GHE 73
L +L GH V V SH + SSS + + + L + S P+ +T
Sbjct: 56 LQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFS 115
Query: 74 QGISDLAT------IRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIW 127
LAT + ++ V + +L ++ I ++P + S + I I+
Sbjct: 116 PDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIF 175
Query: 128 DIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTL 184
DI TGK L L H+ P+ ++ F+ D ++VT+S DG +I D N L GTL
Sbjct: 176 DIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHAN----LAGTL 228
Score = 144 (55.7 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 37/149 (24%), Positives = 72/149 (48%)
Query: 29 VKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTP--PSPLQK--FTGHEQGI---SDLAT 81
+ +S DG+ L S + + + + +++ + P++ F+ Q + SD
Sbjct: 154 IAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGY 213
Query: 82 IRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAH 141
I+++DV A TL GH ++V + F P VS + ++++++WD+ T C+ H
Sbjct: 214 IKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDH 273
Query: 142 SDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
D V + +N +G+ IV+ D I D
Sbjct: 274 QDQVWGVKYNGNGSKIVSVGDDQEIHIYD 302
Score = 119 (46.9 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 37/125 (29%), Positives = 58/125 (46%)
Query: 50 YSLSSISNFD-STPPSPLQKFTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINF 108
YSL + F S SP K+ G D I ++D+ T L TL GH + + F
Sbjct: 142 YSLDTRGKFILSIAYSPDGKYLA--SGAID-GIINIFDIATGKLLHTLEGHAMPIRSLTF 198
Query: 109 NPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRI 168
+P S +V+ + + I+I+D++ L H+ V + F D T V+SS D ++
Sbjct: 199 SPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKV 258
Query: 169 LDAST 173
D T
Sbjct: 259 WDVGT 263
Score = 47 (21.6 bits), Expect = 8.9e-11, Sum P(2) = 8.9e-11
Identities = 13/59 (22%), Positives = 27/59 (45%)
Query: 171 ASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRD 229
A P+ + + D ++++W+ TR + T+ + + + + NG IVS D
Sbjct: 239 AFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYN---GNGSKIVSVGD 294
>UNIPROTKB|E2RBV0 [details] [associations]
symbol:WDR61 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001162 "positive regulation of histone
H3-K79 methylation" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:0055087 "Ski complex"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0035327 "transcriptionally active chromatin"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0016593 "Cdc73/Paf1 complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
KO:K12602 OMA:IATGSHH EMBL:AAEX03002395 EMBL:AAEX03002396
RefSeq:XP_536215.2 ProteinModelPortal:E2RBV0
Ensembl:ENSCAFT00000022589 GeneID:479068 KEGG:cfa:479068
NextBio:20854309 Uniprot:E2RBV0
Length = 305
Score = 156 (60.0 bits), Expect = 8.9e-11, Sum P(2) = 8.9e-11
Identities = 48/177 (27%), Positives = 77/177 (43%)
Query: 15 LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFT-GHE 73
L +L GH V V SH + SSS + + + L + S P+ +T
Sbjct: 56 LQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLDNGKQIKSIDAGPVDAWTLAFS 115
Query: 74 QGISDLAT------IRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIW 127
LAT + ++ V + +L ++ I ++P + S + I I+
Sbjct: 116 PDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIF 175
Query: 128 DIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTL 184
DI TGK L L H+ P+ ++ F+ D ++VT+S DG +I D N L GTL
Sbjct: 176 DIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHAN----LAGTL 228
Score = 143 (55.4 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 36/149 (24%), Positives = 72/149 (48%)
Query: 29 VKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTP--PSPLQK--FTGHEQGI---SDLAT 81
+ +S DG+ L S + + + + +++ + P++ F+ Q + SD
Sbjct: 154 IAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGY 213
Query: 82 IRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAH 141
I+++DV A TL GH ++V + F P VS + ++++++WD+ T C+ H
Sbjct: 214 IKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDH 273
Query: 142 SDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
D V + +N +G+ IV+ D + D
Sbjct: 274 QDQVWGVKYNGNGSKIVSVGDDQEIHVYD 302
Score = 119 (46.9 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 37/125 (29%), Positives = 58/125 (46%)
Query: 50 YSLSSISNFD-STPPSPLQKFTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINF 108
YSL + F S SP K+ G D I ++D+ T L TL GH + + F
Sbjct: 142 YSLDTRGKFILSIAYSPDGKYLA--SGAID-GIINIFDIATGKLLHTLEGHAMPIRSLTF 198
Query: 109 NPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRI 168
+P S +V+ + + I+I+D++ L H+ V + F D T V+SS D ++
Sbjct: 199 SPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKV 258
Query: 169 LDAST 173
D T
Sbjct: 259 WDVGT 263
Score = 47 (21.6 bits), Expect = 8.9e-11, Sum P(2) = 8.9e-11
Identities = 13/59 (22%), Positives = 27/59 (45%)
Query: 171 ASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRD 229
A P+ + + D ++++W+ TR + T+ + + + + NG IVS D
Sbjct: 239 AFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYN---GNGSKIVSVGD 294
>RGD|1310215 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II, p300/CBP-associated
factor (PCAF)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] [GO:0004402 "histone
acetyltransferase activity" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310215 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
EMBL:BC098861 IPI:IPI00359892 UniGene:Rn.23853
ProteinModelPortal:Q4G004 UCSC:RGD:1310215 InParanoid:Q4G004
ArrayExpress:Q4G004 Genevestigator:Q4G004 Uniprot:Q4G004
Length = 143
Score = 152 (58.6 bits), Expect = 9.5e-11, P = 9.5e-11
Identities = 26/90 (28%), Positives = 49/90 (54%)
Query: 81 TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPA 140
T+RLW S++ GH V ++F+P + S ++ +++WD+ +G K L
Sbjct: 3 TVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRG 62
Query: 141 HSDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
H+D +T++ F+ D +I ++S D R+ D
Sbjct: 63 HTDSITSLAFSPDSGLIASASMDNSVRVWD 92
Score = 116 (45.9 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 19/53 (35%), Positives = 34/53 (64%)
Query: 82 IRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKC 134
++LWD+ + T K L GHT+ + + F+P S I S + + ++R+WDI++ C
Sbjct: 46 LKLWDLASGTLFKELRGHTDSITSLAFSPDSGLIASASMDNSVRVWDIRSTCC 98
>RGD|1359721 [details] [associations]
symbol:Btrc "beta-transducin repeat containing E3 ubiquitin
protein ligase" species:10116 "Rattus norvegicus" [GO:0000209
"protein polyubiquitination" evidence=IEA;ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;ISO] [GO:0006470
"protein dephosphorylation" evidence=IEA;ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;ISO]
[GO:0008013 "beta-catenin binding" evidence=IEA;ISO] [GO:0016567
"protein ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA;ISO] [GO:0030163 "protein catabolic
process" evidence=ISO] [GO:0031648 "protein destabilization"
evidence=IEA;ISO] [GO:0033598 "mammary gland epithelial cell
proliferation" evidence=IEA;ISO] [GO:0042753 "positive regulation
of circadian rhythm" evidence=IEA;ISO] [GO:0043122 "regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA;ISO] [GO:0045309
"protein phosphorylated amino acid binding" evidence=IEA;ISO]
[GO:0045862 "positive regulation of proteolysis" evidence=IEA;ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA;ISO] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA;ISO]
[GO:0061136 "regulation of proteasomal protein catabolic process"
evidence=IEA;ISO] [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 CTD:8945 HOGENOM:HOG000006638 HOVERGEN:HBG002521
KO:K03362 OrthoDB:EOG4F1X2M EMBL:BC085125 IPI:IPI00951294
RefSeq:NP_001007149.2 UniGene:Rn.21800 SMR:Q5U4E5 STRING:Q5U4E5
Ensembl:ENSRNOT00000064259 GeneID:361765 KEGG:rno:361765
UCSC:RGD:1359721 InParanoid:Q5U4E5 NextBio:677539
Genevestigator:Q5U4E5 Uniprot:Q5U4E5
Length = 506
Score = 172 (65.6 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 49/169 (28%), Positives = 87/169 (51%)
Query: 15 LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGHEQ 74
+ TL H AV +++F++ G ++T S ++++ + ++S + D T L GH
Sbjct: 276 MLNTLIHHCEAVLHLRFNN-GMMVTCSK-DRSIAVWDMASPT--DITLRRVL---VGHRA 328
Query: 75 GIS--DL-----------ATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFN 121
++ D TI++W+ T ++TL GH + C+ + + +VS + +
Sbjct: 329 AVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSD 386
Query: 122 ETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
TIR+WDI+ G CL+VL H + V I F D IV+ +YDG ++ D
Sbjct: 387 NTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWD 433
Score = 166 (63.5 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 62/196 (31%), Positives = 91/196 (46%)
Query: 2 SSDRSL---ESFRP--YTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSIS 56
S DRS+ + P TL + L GH AV+ V F D + + S+S ++T+ ++ S+
Sbjct: 301 SKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCE 358
Query: 57 NFDSTPPSPLQKFTGHEQGISDLA-------------TIRLWDVPTATSLKTLIGHTNYV 103
F T GH++GI+ L TIRLWD+ L+ L GH V
Sbjct: 359 -FVRT-------LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV 410
Query: 104 FCINFNPQSNRIVSDTFNETIRIWDIKTGK---------CLKVLPAHSDPVTAIDFNRDG 154
CI F+ + RIVS ++ I++WD+ CL+ L HS V + F D
Sbjct: 411 RCIRFD--NKRIVSGAYDGKIKVWDLMAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DE 466
Query: 155 TMIVTSSYDGLYRILD 170
IV+SS+D I D
Sbjct: 467 FQIVSSSHDDTILIWD 482
Score = 162 (62.1 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 50/189 (26%), Positives = 93/189 (49%)
Query: 75 GISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKC 134
G+ D TI++WD T + L GHT V C+ ++ + I++ + + T+R+WD+ G+
Sbjct: 220 GLRD-NTIKIWDKSTLECKRILTGHTGSVLCLQYDERV--IITGSSDSTVRVWDVNAGEM 276
Query: 135 LKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNG---KFILVGTLDNTLRLW 191
L L H + V + FN +G M+VT S D + D ++P + +LVG + +
Sbjct: 277 LNTLIHHCEAVLHLRFN-NG-MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA-AVNVV 333
Query: 192 NYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDND 251
++ + I+ SG K +ST + + H+ + + ++ SG+ DN
Sbjct: 334 DFDDKYIVSA-SGDRTIKVWNTSTCEFV--RTLNGHKRGIACLQYRD--RLVVSGSSDN- 387
Query: 252 RTMKIWTQE 260
T+++W E
Sbjct: 388 -TIRLWDIE 395
Score = 148 (57.2 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 42/156 (26%), Positives = 78/156 (50%)
Query: 103 VFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSY 162
V+C+ ++ Q +IVS + TI+IWD T +C ++L H+ V + + D +I+T S
Sbjct: 207 VYCLQYDDQ--KIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQY--DERVIITGSS 262
Query: 163 DGLYRILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGK 222
D R+ D + L+ + L L ++ ++ + + + ++S +T +
Sbjct: 263 DSTVRVWDVNAGEMLNTLIHHCEAVLHL-RFNNGMMVTCSKDRSIAVWDMASPTDITLRR 321
Query: 223 YIVSHRDPVISVASHPAKNII-ASGALDNDRTMKIW 257
+V HR ++V K I+ ASG DRT+K+W
Sbjct: 322 VLVGHR-AAVNVVDFDDKYIVSASG----DRTIKVW 352
>UNIPROTKB|F1P5E8 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AADN02035964
EMBL:AADN02035965 EMBL:AADN02035966 IPI:IPI00735168
Ensembl:ENSGALT00000003489 ArrayExpress:F1P5E8 Uniprot:F1P5E8
Length = 515
Score = 172 (65.6 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 53/184 (28%), Positives = 92/184 (50%)
Query: 2 SSDRSLESFRPYT--LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFD 59
SSD ++ + T + TL H AV +++FS+ L+ + S ++++ + ++S + D
Sbjct: 270 SSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG--LMVTCSKDRSIAVWDMASPT--D 325
Query: 60 STPPSPLQKFTGHEQGIS--DL-----------ATIRLWDVPTATSLKTLIGHTNYVFCI 106
T L GH ++ D TI++W T ++TL GH + C+
Sbjct: 326 ITLRRVL---VGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACL 382
Query: 107 NFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLY 166
+ + +VS + + TIR+WDI+ G CL+VL H + V I F D IV+ +YDG
Sbjct: 383 QY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKI 438
Query: 167 RILD 170
++ D
Sbjct: 439 KVWD 442
Score = 170 (64.9 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 62/196 (31%), Positives = 92/196 (46%)
Query: 2 SSDRSL---ESFRP--YTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSIS 56
S DRS+ + P TL + L GH AV+ V F D + + S+S ++T+ +S S+
Sbjct: 310 SKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCE 367
Query: 57 NFDSTPPSPLQKFTGHEQGISDLA-------------TIRLWDVPTATSLKTLIGHTNYV 103
F T GH++GI+ L TIRLWD+ L+ L GH V
Sbjct: 368 -FVRT-------LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV 419
Query: 104 FCINFNPQSNRIVSDTFNETIRIWDIKTGK---------CLKVLPAHSDPVTAIDFNRDG 154
CI F+ + RIVS ++ I++WD++ CL+ L HS V + F D
Sbjct: 420 RCIRFD--NKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DE 475
Query: 155 TMIVTSSYDGLYRILD 170
I++SS+D I D
Sbjct: 476 FQIISSSHDDTILIWD 491
Score = 166 (63.5 bits), Expect = 5.9e-10, P = 5.9e-10
Identities = 51/189 (26%), Positives = 95/189 (50%)
Query: 75 GISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKC 134
G+ D +I++WD + LK L GHT V C+ ++ + IV+ + + T+R+WD+ TG+
Sbjct: 229 GLRD-NSIKIWDKTSLECLKVLTGHTGSVLCLQYDERV--IVTGSSDSTVRVWDVNTGEV 285
Query: 135 LKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNG---KFILVGTLDNTLRLW 191
L L H++ V + F+ +G M VT S D + D ++P + +LVG + +
Sbjct: 286 LNTLIHHNEAVLHLRFS-NGLM-VTCSKDRSIAVWDMASPTDITLRRVLVGHRA-AVNVV 342
Query: 192 NYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDND 251
++ + I+ SG K +ST + + H+ + + ++ SG+ DN
Sbjct: 343 DFDDKYIVSA-SGDRTIKVWSTSTCEFV--RTLNGHKRGIACLQYRD--RLVVSGSSDN- 396
Query: 252 RTMKIWTQE 260
T+++W E
Sbjct: 397 -TIRLWDIE 404
Score = 152 (58.6 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 44/157 (28%), Positives = 81/157 (51%)
Query: 103 VFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSY 162
V+C+ ++ + +I+S + +I+IWD + +CLKVL H+ V + + D +IVT S
Sbjct: 216 VYCLQYDDE--KIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQY--DERVIVTGSS 271
Query: 163 DGLYRILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGK 222
D R+ D +T L+ + L L +S ++ + + + ++S +T +
Sbjct: 272 DSTVRVWDVNTGEVLNTLIHHNEAVLHL-RFSNGLMVTCSKDRSIAVWDMASPTDITLRR 330
Query: 223 YIVSHRDPVISVASHPAKNII-ASGALDNDRTMKIWT 258
+V HR ++V K I+ ASG DRT+K+W+
Sbjct: 331 VLVGHR-AAVNVVDFDDKYIVSASG----DRTIKVWS 362
>FB|FBgn0039867 [details] [associations]
symbol:CstF-50 "CstF-50" species:7227 "Drosophila
melanogaster" [GO:0005848 "mRNA cleavage stimulating factor
complex" evidence=ISS] [GO:0006379 "mRNA cleavage" evidence=ISS]
[GO:0005654 "nucleoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006379 KO:K14406
OMA:LYDHTDE GeneTree:ENSGT00700000104487 HSSP:P46680 GO:GO:0005848
FlyBase:FBgn0039867 NextBio:835499 EMBL:AY094802 RefSeq:NP_651883.1
UniGene:Dm.11654 SMR:Q9V9V0 IntAct:Q9V9V0 MINT:MINT-287008
STRING:Q9V9V0 EnsemblMetazoa:FBtr0085865 GeneID:43734
KEGG:dme:Dmel_CG2261 UCSC:CG2261-RA CTD:43734 InParanoid:Q9V9V0
GenomeRNAi:43734 Uniprot:Q9V9V0
Length = 424
Score = 138 (53.6 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 42/175 (24%), Positives = 83/175 (47%)
Query: 13 YTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLS--SISN----FDSTPPSPL 66
+ + +TL H VSY++F +L S+S + T+ + ++ S+ F P
Sbjct: 156 HPVIRTLYDHTDEVSYLEFHPKEHILASASRDGTVKLFDIAKPSVKKAHKVFTDCEPVLC 215
Query: 67 QKF--TGHEQGI-SDLATIRLWDVPTATSLKTLIG---HTNYVFCINFNPQSNRIVSDTF 120
F TG I ++ +R++DV T + I H V C+ ++P + ++
Sbjct: 216 LSFHPTGDYVAIGTEHNVLRVYDVATTQCFVSAIPSQQHKAGVTCVKYSPTGKLYATGSY 275
Query: 121 NETIRIWDIKTGKCLKVLP-AHSDP-VTAIDFNRDGTMIVTSSYDGLYRILDAST 173
+ I+IWD +G+C+ + AH + +++F R+G +++S D L + + T
Sbjct: 276 DGDIKIWDGISGRCINTIAEAHGGAAICSLEFTRNGKYLLSSGMDSLVYLWELCT 330
Score = 75 (31.5 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 20/72 (27%), Positives = 38/72 (52%)
Query: 173 TPNGKFILVGTLDNTLRLWNYSTRKILKTYSGY-TNSK--YCISSTFSVTNGKYIVSHRD 229
T NGK++L +D+ + LW T + ++TY+G T K + + F+ T Y++ +
Sbjct: 308 TRNGKYLLSSGMDSLVYLWELCTSRPIQTYTGAGTTGKQEHQTEAVFNHTED-YVLFPDE 366
Query: 230 PVISVASHPAKN 241
S+ S ++N
Sbjct: 367 ATTSLCSWNSRN 378
>UNIPROTKB|Q7YR70 [details] [associations]
symbol:AAMP "Angio-associated migratory cell protein"
species:9615 "Canis lupus familiaris" [GO:0014909 "smooth muscle
cell migration" evidence=ISS] [GO:0009986 "cell surface"
evidence=ISS] [GO:0010595 "positive regulation of endothelial cell
migration" evidence=ISS] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005886 GO:GO:0005737 GO:GO:0009986
GO:GO:0030154 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 CTD:14
GeneTree:ENSGT00690000102167 HOGENOM:HOG000261676
HOVERGEN:HBG061307 OMA:VWSFEVG OrthoDB:EOG4D26PX GO:GO:0001525
GO:GO:0010595 GO:GO:0014909 EMBL:AY197355 RefSeq:NP_001013872.1
UniGene:Cfa.8616 ProteinModelPortal:Q7YR70 STRING:Q7YR70
Ensembl:ENSCAFT00000023220 GeneID:478908 KEGG:cfa:478908
InParanoid:Q7YR70 NextBio:20854176 Uniprot:Q7YR70
Length = 435
Score = 153 (58.9 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 49/168 (29%), Positives = 74/168 (44%)
Query: 21 GHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGHEQ------ 74
GH +V+ FSHD L+ + L + + + S L+ H +
Sbjct: 133 GHKDSVTCAGFSHDSTLVATGDMSGLLKVWQVDTKEEVWSFEAGDLEWMEWHPRAPVLLA 192
Query: 75 GISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKC 134
G +D T +W VP KT G C P R V + TIRIWD+K G
Sbjct: 193 GTADGNTW-MWKVPNG-DCKTFQGPNCPATCGRVLPDGKRAVVGYEDGTIRIWDLKQGSP 250
Query: 135 LKVLPA---HSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFI 179
+ VL H P+T + N+DG++I+T S D +++ A+T GK +
Sbjct: 251 IHVLKGTEGHQGPLTCVATNQDGSLILTGSVDCQAQLVSATT--GKVV 296
Score = 113 (44.8 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 21/76 (27%), Positives = 39/76 (51%)
Query: 99 HTNYVFCINFNPQSNRI-VSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMI 157
H+ VFC++ +P++N + V+ ++ +W + G+ L H D VT F+ D T++
Sbjct: 91 HSASVFCVSLDPKTNTLAVTGGEDDKAFVWRLSDGELLFECAGHKDSVTCAGFSHDSTLV 150
Query: 158 VTSSYDGLYRILDAST 173
T GL ++ T
Sbjct: 151 ATGDMSGLLKVWQVDT 166
Score = 62 (26.9 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 14/44 (31%), Positives = 24/44 (54%)
Query: 174 PNGKFILVGTLDNTLRLWNY---STRKILKTYSGYTNSKYCISS 214
P+GK +VG D T+R+W+ S +LK G+ C+++
Sbjct: 226 PDGKRAVVGYEDGTIRIWDLKQGSPIHVLKGTEGHQGPLTCVAT 269
Score = 57 (25.1 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 183 TLDNTLRLWNYSTRKILKTYSGYT 206
+LD +RLW+ T ++L Y G+T
Sbjct: 378 SLDGIVRLWDARTGRLLTDYRGHT 401
Score = 40 (19.1 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 9/31 (29%), Positives = 12/31 (38%)
Query: 174 PNGKFILVGTLDNTLRLWNYSTRKILKTYSG 204
P +L GT D +W KT+ G
Sbjct: 185 PRAPVLLAGTADGNTWMWKVPNGDC-KTFQG 214
>UNIPROTKB|E1BHK9 [details] [associations]
symbol:E1BHK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 EMBL:DAAA02074871 IPI:IPI00726849
ProteinModelPortal:E1BHK9 Ensembl:ENSBTAT00000028149 OMA:RTATERK
Uniprot:E1BHK9
Length = 586
Score = 172 (65.6 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 56/208 (26%), Positives = 92/208 (44%)
Query: 7 LESFRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPL 66
LESF T T GH V + S S+S + T +S FD T PL
Sbjct: 368 LESF---TNTVLYQGHAYPVWDLDISPHSLFFASASYDHTARLWS------FDRT--YPL 416
Query: 67 QKFTGHEQGI---------SDLAT------IRLWDVPTATSLKTLIGHTNYVFCINFNPQ 111
+ + GH G+ + LAT +RLW S++ GH V C+ F+P
Sbjct: 417 RIYAGHLAGVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHCGPVRCLAFSPN 476
Query: 112 SNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDA 171
+VS ++ +++WD+ +G K L H+D +T++ F+ D ++I ++S D RI D
Sbjct: 477 GQYLVSAGEDQLLKLWDLASGTLYKDLHGHTDDITSVTFSLDSSVIASASMDNSVRIWDI 536
Query: 172 STPNGKFILVGTLDNTLRLWNYSTRKIL 199
+ + G+ L ++ +L
Sbjct: 537 KSKHNSTPADGSSSELLGVYTGQMSTVL 564
Score = 164 (62.8 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 44/174 (25%), Positives = 79/174 (45%)
Query: 8 ESFRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNF-----DSTP 62
E R T + L GH V +F D L S S + ++ + L S +N + P
Sbjct: 324 EEDRTATERKVLLGHCGPVYSTRFLPDSSALLSCSEDTSIRYWDLESFTNTVLYQGHAYP 383
Query: 63 PSPLQKFTGHEQGISDLA---TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDT 119
L + H + + T RLW L+ GH V C+ F+P SN + + +
Sbjct: 384 VWDLD-ISPHSLFFASASYDHTARLWSFDRTYPLRIYAGHLAGVDCVKFHPNSNYLATGS 442
Query: 120 FNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDAST 173
++T+R+W + G +++ H PV + F+ +G +V++ D L ++ D ++
Sbjct: 443 TDKTVRLWSAQQGNSVRLFTGHCGPVRCLAFSPNGQYLVSAGEDQLLKLWDLAS 496
Score = 144 (55.7 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 56/226 (24%), Positives = 93/226 (41%)
Query: 32 SHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGHEQGISDLATIRLWDVPTAT 91
S D +LL + ++ +SL+S F S P Q H I+D + D TAT
Sbjct: 277 SPDNKLLATGLNNSSIKLWSLTS--KFKSKPH---QIDVSHIHLINDTLEVDEED-RTAT 330
Query: 92 SLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFN 151
K L+GH V+ F P S+ ++S + + +IR WD+++ + H+ PV +D +
Sbjct: 331 ERKVLLGHCGPVYSTRFLPDSSALLSCSEDTSIRYWDLESFTNTVLYQGHAYPVWDLDIS 390
Query: 152 RDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYC 211
++SYD R+ I G L + + L T G T+
Sbjct: 391 PHSLFFASASYDHTARLWSFDRTYPLRIYAGHLAGVDCVKFHPNSNYLAT--GSTDKTVR 448
Query: 212 ISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDNDRTMKIW 257
+ S + + H PV +A P + S D+ +K+W
Sbjct: 449 LWSAQQGNSVRLFTGHCGPVRCLAFSPNGQYLVSAG--EDQLLKLW 492
Score = 136 (52.9 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 43/181 (23%), Positives = 78/181 (43%)
Query: 77 SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLK 136
S+ +IR WD+ + T+ GH V+ ++ +P S S +++ T R+W L+
Sbjct: 358 SEDTSIRYWDLESFTNTVLYQGHAYPVWDLDISPHSLFFASASYDHTARLWSFDRTYPLR 417
Query: 137 VLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYSTR 196
+ H V + F+ + + T S D R+ A N + G +R +S
Sbjct: 418 IYAGHLAGVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHC-GPVRCLAFSPN 476
Query: 197 KILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDNDRTMKI 256
+G + + S T K + H D + SV ++IAS ++DN +++I
Sbjct: 477 GQYLVSAG-EDQLLKLWDLASGTLYKDLHGHTDDITSVTFSLDSSVIASASMDN--SVRI 533
Query: 257 W 257
W
Sbjct: 534 W 534
>POMBASE|SPBC713.04c [details] [associations]
symbol:SPBC713.04c "U3 snoRNP-associated protein Utp1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IDA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0030515 "snoRNA binding" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC713.04c GO:GO:0005829
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 GO:GO:0030515 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0006364 GO:GO:0005732 HOGENOM:HOG000160363
KO:K14558 OMA:VWQCDTP InterPro:IPR027145 InterPro:IPR007148
PANTHER:PTHR19858 Pfam:PF04003 RefSeq:NP_595343.1
ProteinModelPortal:Q9C1X1 STRING:Q9C1X1 EnsemblFungi:SPBC713.04c.1
GeneID:2541182 KEGG:spo:SPBC713.04c OrthoDB:EOG4350F7
NextBio:20802294 Uniprot:Q9C1X1
Length = 854
Score = 174 (66.3 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 53/158 (33%), Positives = 82/158 (51%)
Query: 18 TLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDS-TPPSPLQKF------T 70
T H AVS + FS G +L SSS + ++ + L NF + T PS +Q +
Sbjct: 376 TFTQHTSAVSGLCFSKRGNVLFSSSLDGSVRAWDLIRYRNFRTFTAPSRVQFSCIAVDPS 435
Query: 71 GHE--QGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWD 128
G G D I +W V T L+TL GH V ++FN + + S ++++T+RIWD
Sbjct: 436 GEIVCAGSQDSFEIFMWSVQTGQLLETLAGHEGPVSSLSFNSSGSLLASGSWDKTVRIWD 495
Query: 129 I--KTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDG 164
I ++G ++ LP SD V ++ F+ DG + +S DG
Sbjct: 496 IFSRSG-IVEPLPIPSD-VLSLAFHPDGKEVCVASLDG 531
Score = 146 (56.5 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 45/175 (25%), Positives = 85/175 (48%)
Query: 13 YTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS---ISNFDSTPPSPLQKF 69
Y L Q H A+S +++S DG+ + + + + + + ++S I F + S +
Sbjct: 331 YVLKQ--QSHYDALSTLQYSSDGQRIITGADDGKIKVWDMNSGFCIVTF-TQHTSAVSGL 387
Query: 70 TGHEQG----ISDL-ATIRLWDVPTATSLKTLIGHTNYVF-CINFNPQSNRIVSDTFNET 123
++G S L ++R WD+ + +T + F CI +P S IV ++
Sbjct: 388 CFSKRGNVLFSSSLDGSVRAWDLIRYRNFRTFTAPSRVQFSCIAVDP-SGEIVCAGSQDS 446
Query: 124 IRI--WDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNG 176
I W ++TG+ L+ L H PV+++ FN G+++ + S+D RI D + +G
Sbjct: 447 FEIFMWSVQTGQLLETLAGHEGPVSSLSFNSSGSLLASGSWDKTVRIWDIFSRSG 501
Score = 118 (46.6 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 30/126 (23%), Positives = 62/126 (49%)
Query: 46 TLLTYSLS-SISNFDSTPPSPLQKFTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVF 104
T+L Y LS + SN D+ + + G S L + +W+ + + + H + +
Sbjct: 287 TML-YQLSITQSNIDTLTVNSTGDWIAI--GSSKLGQLLVWEWQSESYVLKQQSHYDALS 343
Query: 105 CINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDG 164
+ ++ RI++ + I++WD+ +G C+ H+ V+ + F++ G ++ +SS DG
Sbjct: 344 TLQYSSDGQRIITGADDGKIKVWDMNSGFCIVTFTQHTSAVSGLCFSKRGNVLFSSSLDG 403
Query: 165 LYRILD 170
R D
Sbjct: 404 SVRAWD 409
Score = 71 (30.1 bits), Expect = 0.00010, Sum P(4) = 0.00010
Identities = 22/73 (30%), Positives = 33/73 (45%)
Query: 6 SLES--FRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPP 63
SLE F P+ L + GH + + +S D R S+S + T +S+ I F P
Sbjct: 127 SLEEREFAPFVLHREYTGHFDDIVSISWSADSRFFISTSKDLTARLHSVDPIEGFH---P 183
Query: 64 SPLQKFTGHEQGI 76
L TGH+ +
Sbjct: 184 CAL---TGHKNTV 193
Score = 71 (30.1 bits), Expect = 0.00010, Sum P(4) = 0.00010
Identities = 23/106 (21%), Positives = 49/106 (46%)
Query: 84 LWDVPTATSLKTL-IGHTNY-VFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAH 141
++++P+ T L L I +N +N I S + + +W+ ++ + +H
Sbjct: 280 IYELPSFTMLYQLSITQSNIDTLTVNSTGDWIAIGSSKLGQLL-VWEWQSESYVLKQQSH 338
Query: 142 SDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNT 187
D ++ + ++ DG I+T + DG ++ D N F +V +T
Sbjct: 339 YDALSTLQYSSDGQRIITGADDGKIKVWDM---NSGFCIVTFTQHT 381
Score = 60 (26.2 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 14/45 (31%), Positives = 28/45 (62%)
Query: 216 FSVTNGKYI---VSHRDPVISVASHPAKNIIASGALDNDRTMKIW 257
+SV G+ + H PV S++ + + +++ASG+ D +T++IW
Sbjct: 452 WSVQTGQLLETLAGHEGPVSSLSFNSSGSLLASGSWD--KTVRIW 494
Score = 57 (25.1 bits), Expect = 3.2e-06, Sum P(3) = 3.2e-06
Identities = 14/57 (24%), Positives = 31/57 (54%)
Query: 171 ASTPNGKFILVGTLDN-TLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVS 226
A P+G+ + G+ D+ + +W+ T ++L+T +G+ +SS ++G + S
Sbjct: 431 AVDPSGEIVCAGSQDSFEIFMWSVQTGQLLETLAGHEGP---VSSLSFNSSGSLLAS 484
Score = 43 (20.2 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 14/49 (28%), Positives = 21/49 (42%)
Query: 7 LESFRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSI 55
+E F P LT GH V FS D + + + S + L + S +
Sbjct: 178 IEGFHPCALT----GHKNTVVSGFFSKDQQTIYTVSKDGALFVWKYSPL 222
Score = 43 (20.2 bits), Expect = 0.00010, Sum P(4) = 0.00010
Identities = 8/39 (20%), Positives = 21/39 (53%)
Query: 176 GKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKY-CIS 213
G + +LD ++R W+ + +T++ + ++ CI+
Sbjct: 393 GNVLFSSSLDGSVRAWDLIRYRNFRTFTAPSRVQFSCIA 431
>MGI|MGI:1338871 [details] [associations]
symbol:Btrc "beta-transducin repeat containing protein"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008013 "beta-catenin binding"
evidence=IDA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0031648
"protein destabilization" evidence=ISO] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IMP]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IDA] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IMP] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IMP] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IDA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
UniPathway:UPA00143 MGI:MGI:1338871 GO:GO:0005829 GO:GO:0005634
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH466534 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511
GO:GO:0019005 GO:GO:0004842 GO:GO:0045862 GO:GO:0008013
GO:GO:0000209 GO:GO:0071407 GO:GO:0045309 Reactome:REACT_109335
Reactome:REACT_24972 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OMA:NAYLKPM
OrthoDB:EOG4F1X2M EMBL:AF099932 EMBL:AF110396 EMBL:AF112979
EMBL:AF081887 EMBL:AF391190 EMBL:AF391178 EMBL:AF391179
EMBL:AF391180 EMBL:AF391181 EMBL:AF391182 EMBL:AF391183
EMBL:AF391184 EMBL:AF391185 EMBL:AF391186 EMBL:AF391187
EMBL:AF391188 EMBL:AF391189 EMBL:AK145624 EMBL:AK156660
EMBL:AK220183 EMBL:BC003989 IPI:IPI00402788 IPI:IPI00877195
RefSeq:NP_001032847.2 RefSeq:NP_033901.1 UniGene:Mm.119717
UniGene:Mm.446448 HSSP:Q9Y297 ProteinModelPortal:Q3ULA2 SMR:Q3ULA2
IntAct:Q3ULA2 STRING:Q3ULA2 PhosphoSite:Q3ULA2
Ensembl:ENSMUST00000065601 Ensembl:ENSMUST00000111936 GeneID:12234
KEGG:mmu:12234 UCSC:uc008hqy.2 UCSC:uc008hqz.2
GeneTree:ENSGT00690000101849 InParanoid:Q571K6 NextBio:280656
Bgee:Q3ULA2 Genevestigator:Q3ULA2 Uniprot:Q3ULA2
Length = 605
Score = 172 (65.6 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 49/169 (28%), Positives = 87/169 (51%)
Query: 15 LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGHEQ 74
+ TL H AV +++F++ G ++T S ++++ + ++S + D T L GH
Sbjct: 375 MLNTLIHHCEAVLHLRFNN-GMMVTCSK-DRSIAVWDMASPT--DITLRRVL---VGHRA 427
Query: 75 GIS--DL-----------ATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFN 121
++ D TI++W+ T ++TL GH + C+ + + +VS + +
Sbjct: 428 AVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSD 485
Query: 122 ETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
TIR+WDI+ G CL+VL H + V I F D IV+ +YDG ++ D
Sbjct: 486 NTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWD 532
Score = 166 (63.5 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 62/196 (31%), Positives = 91/196 (46%)
Query: 2 SSDRSL---ESFRP--YTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSIS 56
S DRS+ + P TL + L GH AV+ V F D + + S+S ++T+ ++ S+
Sbjct: 400 SKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCE 457
Query: 57 NFDSTPPSPLQKFTGHEQGISDLA-------------TIRLWDVPTATSLKTLIGHTNYV 103
F T GH++GI+ L TIRLWD+ L+ L GH V
Sbjct: 458 -FVRT-------LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV 509
Query: 104 FCINFNPQSNRIVSDTFNETIRIWDIKTGK---------CLKVLPAHSDPVTAIDFNRDG 154
CI F+ + RIVS ++ I++WD+ CL+ L HS V + F D
Sbjct: 510 RCIRFD--NKRIVSGAYDGKIKVWDLMAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DE 565
Query: 155 TMIVTSSYDGLYRILD 170
IV+SS+D I D
Sbjct: 566 FQIVSSSHDDTILIWD 581
Score = 162 (62.1 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 50/189 (26%), Positives = 93/189 (49%)
Query: 75 GISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKC 134
G+ D TI++WD T + L GHT V C+ ++ + I++ + + T+R+WD+ G+
Sbjct: 319 GLRD-NTIKIWDKSTLECKRILTGHTGSVLCLQYDERV--IITGSSDSTVRVWDVNAGEM 375
Query: 135 LKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNG---KFILVGTLDNTLRLW 191
L L H + V + FN +G M+VT S D + D ++P + +LVG + +
Sbjct: 376 LNTLIHHCEAVLHLRFN-NG-MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA-AVNVV 432
Query: 192 NYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDND 251
++ + I+ SG K +ST + + H+ + + ++ SG+ DN
Sbjct: 433 DFDDKYIVSA-SGDRTIKVWNTSTCEFV--RTLNGHKRGIACLQYRD--RLVVSGSSDN- 486
Query: 252 RTMKIWTQE 260
T+++W E
Sbjct: 487 -TIRLWDIE 494
Score = 148 (57.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 42/156 (26%), Positives = 78/156 (50%)
Query: 103 VFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSY 162
V+C+ ++ Q +IVS + TI+IWD T +C ++L H+ V + + D +I+T S
Sbjct: 306 VYCLQYDDQ--KIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQY--DERVIITGSS 361
Query: 163 DGLYRILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGK 222
D R+ D + L+ + L L ++ ++ + + + ++S +T +
Sbjct: 362 DSTVRVWDVNAGEMLNTLIHHCEAVLHL-RFNNGMMVTCSKDRSIAVWDMASPTDITLRR 420
Query: 223 YIVSHRDPVISVASHPAKNII-ASGALDNDRTMKIW 257
+V HR ++V K I+ ASG DRT+K+W
Sbjct: 421 VLVGHR-AAVNVVDFDDKYIVSASG----DRTIKVW 451
>UNIPROTKB|F1LMH8 [details] [associations]
symbol:Btrc "Protein Btrc" species:10116 "Rattus
norvegicus" [GO:0000209 "protein polyubiquitination" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0006470 "protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 GeneTree:ENSGT00690000101849 IPI:IPI00372531
PRIDE:F1LMH8 Ensembl:ENSRNOT00000022426 ArrayExpress:F1LMH8
Uniprot:F1LMH8
Length = 605
Score = 172 (65.6 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 49/169 (28%), Positives = 87/169 (51%)
Query: 15 LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGHEQ 74
+ TL H AV +++F++ G ++T S ++++ + ++S + D T L GH
Sbjct: 375 MLNTLIHHCEAVLHLRFNN-GMMVTCSK-DRSIAVWDMASPT--DITLRRVL---VGHRA 427
Query: 75 GIS--DL-----------ATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFN 121
++ D TI++W+ T ++TL GH + C+ + + +VS + +
Sbjct: 428 AVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSD 485
Query: 122 ETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
TIR+WDI+ G CL+VL H + V I F D IV+ +YDG ++ D
Sbjct: 486 NTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWD 532
Score = 166 (63.5 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 62/196 (31%), Positives = 91/196 (46%)
Query: 2 SSDRSL---ESFRP--YTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSIS 56
S DRS+ + P TL + L GH AV+ V F D + + S+S ++T+ ++ S+
Sbjct: 400 SKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCE 457
Query: 57 NFDSTPPSPLQKFTGHEQGISDLA-------------TIRLWDVPTATSLKTLIGHTNYV 103
F T GH++GI+ L TIRLWD+ L+ L GH V
Sbjct: 458 -FVRT-------LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV 509
Query: 104 FCINFNPQSNRIVSDTFNETIRIWDIKTGK---------CLKVLPAHSDPVTAIDFNRDG 154
CI F+ + RIVS ++ I++WD+ CL+ L HS V + F D
Sbjct: 510 RCIRFD--NKRIVSGAYDGKIKVWDLMAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DE 565
Query: 155 TMIVTSSYDGLYRILD 170
IV+SS+D I D
Sbjct: 566 FQIVSSSHDDTILIWD 581
Score = 162 (62.1 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 50/189 (26%), Positives = 93/189 (49%)
Query: 75 GISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKC 134
G+ D TI++WD T + L GHT V C+ ++ + I++ + + T+R+WD+ G+
Sbjct: 319 GLRD-NTIKIWDKSTLECKRILTGHTGSVLCLQYDERV--IITGSSDSTVRVWDVNAGEM 375
Query: 135 LKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNG---KFILVGTLDNTLRLW 191
L L H + V + FN +G M+VT S D + D ++P + +LVG + +
Sbjct: 376 LNTLIHHCEAVLHLRFN-NG-MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA-AVNVV 432
Query: 192 NYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDND 251
++ + I+ SG K +ST + + H+ + + ++ SG+ DN
Sbjct: 433 DFDDKYIVSA-SGDRTIKVWNTSTCEFV--RTLNGHKRGIACLQYRD--RLVVSGSSDN- 486
Query: 252 RTMKIWTQE 260
T+++W E
Sbjct: 487 -TIRLWDIE 494
Score = 148 (57.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 42/156 (26%), Positives = 78/156 (50%)
Query: 103 VFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSY 162
V+C+ ++ Q +IVS + TI+IWD T +C ++L H+ V + + D +I+T S
Sbjct: 306 VYCLQYDDQ--KIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQY--DERVIITGSS 361
Query: 163 DGLYRILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGK 222
D R+ D + L+ + L L ++ ++ + + + ++S +T +
Sbjct: 362 DSTVRVWDVNAGEMLNTLIHHCEAVLHL-RFNNGMMVTCSKDRSIAVWDMASPTDITLRR 420
Query: 223 YIVSHRDPVISVASHPAKNII-ASGALDNDRTMKIW 257
+V HR ++V K I+ ASG DRT+K+W
Sbjct: 421 VLVGHR-AAVNVVDFDDKYIVSASG----DRTIKVW 451
>UNIPROTKB|F1NYG1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0006470
"protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0042753 OMA:NAYLKPM GeneTree:ENSGT00690000101849
EMBL:AADN02046404 IPI:IPI00684527 Ensembl:ENSGALT00000033197
Uniprot:F1NYG1
Length = 605
Score = 172 (65.6 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 49/169 (28%), Positives = 87/169 (51%)
Query: 15 LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGHEQ 74
+ TL H AV +++F++ G ++T S ++++ + ++S + D T L GH
Sbjct: 375 MLNTLIHHCEAVLHLRFNN-GMMVTCSK-DRSIAVWDMASPT--DITLRRVL---VGHRA 427
Query: 75 GIS--DL-----------ATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFN 121
++ D TI++W+ T ++TL GH + C+ + + +VS + +
Sbjct: 428 AVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSD 485
Query: 122 ETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
TIR+WDI+ G CL+VL H + V I F D IV+ +YDG ++ D
Sbjct: 486 NTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWD 532
Score = 166 (63.5 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 63/196 (32%), Positives = 92/196 (46%)
Query: 2 SSDRSL---ESFRP--YTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSIS 56
S DRS+ + P TL + L GH AV+ V F D + + S+S ++T+ ++ S+
Sbjct: 400 SKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCE 457
Query: 57 NFDSTPPSPLQKFTGHEQGISDLA-------------TIRLWDVPTATSLKTLIGHTNYV 103
F T GH++GI+ L TIRLWD+ L+ L GH V
Sbjct: 458 -FVRT-------LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV 509
Query: 104 FCINFNPQSNRIVSDTFNETIRIWDI--------KTGK-CLKVLPAHSDPVTAIDFNRDG 154
CI F+ + RIVS ++ I++WD+ G CL+ L HS V + F D
Sbjct: 510 RCIRFD--NKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DE 565
Query: 155 TMIVTSSYDGLYRILD 170
IV+SS+D I D
Sbjct: 566 FQIVSSSHDDTILIWD 581
Score = 161 (61.7 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 50/189 (26%), Positives = 93/189 (49%)
Query: 75 GISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKC 134
G+ D TI++WD T + L GHT V C+ ++ + I++ + + T+R+WD+ G+
Sbjct: 319 GLRD-NTIKIWDKNTLECKRILTGHTGSVLCLQYDERV--IITGSSDSTVRVWDVNAGEM 375
Query: 135 LKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNG---KFILVGTLDNTLRLW 191
L L H + V + FN +G M+VT S D + D ++P + +LVG + +
Sbjct: 376 LNTLIHHCEAVLHLRFN-NG-MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA-AVNVV 432
Query: 192 NYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDND 251
++ + I+ SG K +ST + + H+ + + ++ SG+ DN
Sbjct: 433 DFDDKYIVSA-SGDRTIKVWNTSTCEFV--RTLNGHKRGIACLQYRD--RLVVSGSSDN- 486
Query: 252 RTMKIWTQE 260
T+++W E
Sbjct: 487 -TIRLWDIE 494
Score = 148 (57.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 42/156 (26%), Positives = 78/156 (50%)
Query: 103 VFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSY 162
V+C+ ++ Q +IVS + TI+IWD T +C ++L H+ V + + D +I+T S
Sbjct: 306 VYCLQYDDQ--KIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSS 361
Query: 163 DGLYRILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGK 222
D R+ D + L+ + L L ++ ++ + + + ++S +T +
Sbjct: 362 DSTVRVWDVNAGEMLNTLIHHCEAVLHL-RFNNGMMVTCSKDRSIAVWDMASPTDITLRR 420
Query: 223 YIVSHRDPVISVASHPAKNII-ASGALDNDRTMKIW 257
+V HR ++V K I+ ASG DRT+K+W
Sbjct: 421 VLVGHR-AAVNVVDFDDKYIVSASG----DRTIKVW 451
>FB|FBgn0023423 [details] [associations]
symbol:slmb "supernumerary limbs" species:7227 "Drosophila
melanogaster" [GO:0045879 "negative regulation of smoothened
signaling pathway" evidence=IMP] [GO:0030111 "regulation of Wnt
receptor signaling pathway" evidence=IMP;TAS] [GO:0008588 "release
of cytoplasmic sequestered NF-kappaB" evidence=IMP;TAS] [GO:0008589
"regulation of smoothened signaling pathway" evidence=TAS]
[GO:0000151 "ubiquitin ligase complex" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0030512
"negative regulation of transforming growth factor beta receptor
signaling pathway" evidence=NAS] [GO:0030178 "negative regulation
of Wnt receptor signaling pathway" evidence=IMP;NAS] [GO:0019005
"SCF ubiquitin ligase complex" evidence=NAS;TAS] [GO:0006508
"proteolysis" evidence=IMP] [GO:0045475 "locomotor rhythm"
evidence=IMP] [GO:0007623 "circadian rhythm" evidence=IMP;IPI]
[GO:0007611 "learning or memory" evidence=IMP] [GO:0008355
"olfactory learning" evidence=IMP] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0030708 "germarium-derived female
germ-line cyst encapsulation" evidence=IMP] [GO:0046843 "dorsal
appendage formation" evidence=IMP] [GO:0030720 "oocyte localization
involved in germarium-derived egg chamber formation" evidence=IMP]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0030727
"germarium-derived female germ-line cyst formation" evidence=IMP]
[GO:0045849 "negative regulation of nurse cell apoptotic process"
evidence=IMP] [GO:0030707 "ovarian follicle cell development"
evidence=IMP] [GO:0007293 "germarium-derived egg chamber formation"
evidence=IMP] [GO:0030713 "ovarian follicle cell stalk formation"
evidence=IMP] [GO:0007304 "chorion-containing eggshell formation"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0007298 "border follicle cell migration" evidence=IMP]
[GO:0046599 "regulation of centriole replication" evidence=IDA]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 SMART:SM01028 GO:GO:0007088
GO:GO:0008355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 GO:GO:0006508 SUPFAM:SSF81383 GO:GO:0007298
GO:GO:0045475 GO:GO:0019005 GO:GO:0004842 GO:GO:0030178
GO:GO:0046843 GO:GO:0030720 GO:GO:0030713 GO:GO:0030512
GO:GO:0030727 GO:GO:0030708 GO:GO:0008588 GO:GO:0045879
GO:GO:0046599 HSSP:Q9Y297 GO:GO:0060253 EMBL:AF032878
ProteinModelPortal:O44382 SMR:O44382 IntAct:O44382 STRING:O44382
PaxDb:O44382 PRIDE:O44382 FlyBase:FBgn0023423 HOGENOM:HOG000102803
InParanoid:O44382 OrthoDB:EOG4S7H55 ArrayExpress:O44382 Bgee:O44382
GO:GO:0045849 Uniprot:O44382
Length = 510
Score = 171 (65.3 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 51/189 (26%), Positives = 97/189 (51%)
Query: 75 GISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKC 134
G+ D TI++WD +KTL+GHT V C+ ++ + I+S + + T+R+WD+ TG+
Sbjct: 226 GLRD-NTIKIWDRTDLQCVKTLMGHTGSVLCLQYDDKV--IISGSSDSTVRVWDVNTGEM 282
Query: 135 LKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNG---KFILVGTLDNTLRLW 191
+ L H + V + FN +G M+VT S D + D ++P+ + +LVG + +
Sbjct: 283 VNTLIHHCEAVLHLRFN-NG-MMVTCSKDRSIAVWDMTSPSEITLRRVLVGHRA-AVNVV 339
Query: 192 NYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDND 251
++ + I+ SG K +ST + + H+ + + ++ SG+ DN
Sbjct: 340 DFDEKYIVSA-SGDRTIKVWSTSTCEFV--RTLNGHKRGIACLQYRD--RLVVSGSSDN- 393
Query: 252 RTMKIWTQE 260
++++W E
Sbjct: 394 -SIRLWDIE 401
Score = 170 (64.9 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 54/187 (28%), Positives = 91/187 (48%)
Query: 2 SSDRSLESFRPYT--LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFD 59
SSD ++ + T + TL H AV +++F++ G ++T S SI+ +D
Sbjct: 267 SSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFNN-GMMVTCSKDR---------SIAVWD 316
Query: 60 STPPSPL---QKFTGHEQGIS--DL-----------ATIRLWDVPTATSLKTLIGHTNYV 103
T PS + + GH ++ D TI++W T ++TL GH +
Sbjct: 317 MTSPSEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGI 376
Query: 104 FCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYD 163
C+ + + +VS + + +IR+WDI+ G CL+VL H + V I F D IV+ +YD
Sbjct: 377 ACLQY--RDRLVVSGSSDNSIRLWDIECGACLRVLEGHEELVRCIRF--DTKRIVSGAYD 432
Query: 164 GLYRILD 170
G ++ D
Sbjct: 433 GKIKVWD 439
Score = 161 (61.7 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 64/203 (31%), Positives = 93/203 (45%)
Query: 2 SSDRSL---ESFRP--YTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSIS 56
S DRS+ + P TL + L GH AV+ V F D + + S+S ++T+ +S S+
Sbjct: 307 SKDRSIAVWDMTSPSEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWSTSTCE 364
Query: 57 NFDSTPPSPLQKFTGHEQGISDLA-------------TIRLWDVPTATSLKTLIGHTNYV 103
F T GH++GI+ L +IRLWD+ L+ L GH V
Sbjct: 365 -FVRT-------LNGHKRGIACLQYRDRLVVSGSSDNSIRLWDIECGACLRVLEGHEELV 416
Query: 104 FCINFNPQSNRIVSDTFNETIRIWDIKTGK---------CLKVLPAHSDPVTAIDFNRDG 154
CI F+ + RIVS ++ I++WD+ CL L H+ V + F D
Sbjct: 417 RCIRFD--TKRIVSGAYDGKIKVWDLVAALDPRAASNTLCLNTLVEHTGRVFRLQF--DE 472
Query: 155 TMIVTSSYDGLYRILDAS--TPN 175
IV+SS+D I D TPN
Sbjct: 473 FQIVSSSHDDTILIWDFLNFTPN 495
Score = 143 (55.4 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 41/157 (26%), Positives = 78/157 (49%)
Query: 103 VFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSY 162
V+C+ ++ +IVS + TI+IWD +C+K L H+ V + + D +I++ S
Sbjct: 213 VYCLQYD--DGKIVSGLRDNTIKIWDRTDLQCVKTLMGHTGSVLCLQY--DDKVIISGSS 268
Query: 163 DGLYRILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGK 222
D R+ D +T L+ + L L ++ ++ + + + ++S +T +
Sbjct: 269 DSTVRVWDVNTGEMVNTLIHHCEAVLHL-RFNNGMMVTCSKDRSIAVWDMTSPSEITLRR 327
Query: 223 YIVSHRDPVISVASHPAKNII-ASGALDNDRTMKIWT 258
+V HR ++V K I+ ASG DRT+K+W+
Sbjct: 328 VLVGHR-AAVNVVDFDEKYIVSASG----DRTIKVWS 359
>RGD|1306947 [details] [associations]
symbol:Wdr83 "WD repeat domain 83" species:10116 "Rattus
norvegicus" [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=IEA;ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0005681 "spliceosomal complex"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1306947 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0071013
GO:GO:0000375 CTD:84292 HOVERGEN:HBG105288 KO:K13124
OrthoDB:EOG4ZCT4V EMBL:AY940050 IPI:IPI00209921
RefSeq:NP_001041312.1 UniGene:Rn.3570 ProteinModelPortal:Q5BLX8
PRIDE:Q5BLX8 GeneID:288924 KEGG:rno:288924 InParanoid:Q5BLX8
NextBio:629000 Genevestigator:Q5BLX8 Uniprot:Q5BLX8
Length = 315
Score = 123 (48.4 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 25/90 (27%), Positives = 47/90 (52%)
Query: 81 TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPA 140
T++LW+ T L+T GH V + ++ + S ++T+ +WD+ TG+ ++
Sbjct: 48 TLKLWNPLRGTLLRTYSGHGYEVLDAAGSFDNSHLCSGGGDKTVVLWDVATGQVVRKFRG 107
Query: 141 HSDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
H+ V + FN + T+I++ S D R D
Sbjct: 108 HAGKVNTVQFNEEATVILSGSIDSSVRCWD 137
Score = 115 (45.5 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 43/158 (27%), Positives = 68/158 (43%)
Query: 12 PYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYS------LSSISNFDSTPPSP 65
P +TL+ AV V+F+ DG + ++KTL ++ L + S
Sbjct: 14 PRKQLKTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDA 73
Query: 66 LQKFTGHE--QGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNET 123
F G D T+ LWDV T ++ GH V + FN ++ I+S + + +
Sbjct: 74 AGSFDNSHLCSGGGD-KTVVLWDVATGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSS 132
Query: 124 IRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSS 161
+R WD ++ K P +PV +D RDG V S
Sbjct: 133 VRCWDCRSRK-----P---EPVQTLDEARDGISSVKVS 162
Score = 87 (35.7 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 23/69 (33%), Positives = 37/69 (53%)
Query: 158 VTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFS 217
VTS Y G + +G+ L+ +LD+TLRL + T ++L Y G+ N KY + S
Sbjct: 185 VTSDYVGSPITCTCFSRDGQCTLISSLDSTLRLLDKDTGELLGEYVGHKNQKYKLDCCLS 244
Query: 218 VTNGKYIVS 226
+ ++VS
Sbjct: 245 ERD-THVVS 252
>UNIPROTKB|F1MFJ6 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024
EMBL:DAAA02002018 EMBL:DAAA02002019 EMBL:DAAA02002020
EMBL:DAAA02002021 EMBL:DAAA02002022 EMBL:DAAA02002023
EMBL:DAAA02002024 IPI:IPI00732449 UniGene:Bt.25104
ProteinModelPortal:F1MFJ6 Ensembl:ENSBTAT00000029211 OMA:GYARIWM
NextBio:20899067 Uniprot:F1MFJ6
Length = 514
Score = 149 (57.5 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 53/220 (24%), Positives = 94/220 (42%)
Query: 15 LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLL-----TYSLSSISNFDSTPPSPL--Q 67
L TL H + +K++ G + S+ +KT + T + F S P + Q
Sbjct: 258 LASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQLFPFHSAPALDVDWQ 317
Query: 68 KFTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIW 127
+D+ I + + +KT GHTN V I ++P N + S + + T++IW
Sbjct: 318 SNNTFASCSTDMC-IHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIW 376
Query: 128 DIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVG-TLDN 186
+K C+ L AH+ + I ++ G S PN +L + D+
Sbjct: 377 SMKQDNCVHDLQAHNKEIYTIKWSPTGP--------------GTSNPNANLMLASASFDS 422
Query: 187 TLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVS 226
T+RLW+ + T + + Y ++ FS +G+Y+ S
Sbjct: 423 TVRLWDVDRGICIHTLTKHQEPVYSVA--FS-PDGRYLAS 459
Score = 142 (55.0 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 29/106 (27%), Positives = 53/106 (50%)
Query: 77 SDLATIRLWDVPTATSLKTLIGHTNYVFCINF--------NPQSN-RIVSDTFNETIRIW 127
SD T+++W + + L H ++ I + NP +N + S +F+ T+R+W
Sbjct: 368 SDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTSNPNANLMLASASFDSTVRLW 427
Query: 128 DIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDAST 173
D+ G C+ L H +PV ++ F+ DG + + S+D I + T
Sbjct: 428 DVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQT 473
Score = 135 (52.6 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 43/170 (25%), Positives = 74/170 (43%)
Query: 17 QTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS---ISNFDSTPP-------SPL 66
+T GH V+ +K+ G LL S S + TL +S+ + + + SP
Sbjct: 343 KTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPT 402
Query: 67 QKFTGHEQGISDLA------TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTF 120
T + LA T+RLWDV + TL H V+ + F+P + S +F
Sbjct: 403 GPGTSNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSF 462
Query: 121 NETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
++ + IW+ +TG + + + + +N G + S+ DG +LD
Sbjct: 463 DKCVHIWNTQTGALVHSYRG-TGGIFEVCWNAAGDKVGASASDGSVCVLD 511
Score = 116 (45.9 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 31/98 (31%), Positives = 55/98 (56%)
Query: 86 DVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIK----TGK-------C 134
++P ++ L GH + VF +NP S+ + S + + T RIW++ +G C
Sbjct: 156 EIPPNKAV-VLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHC 214
Query: 135 LKV----LPAHSDPVTAIDFNRDGTMIVTSSYDGLYRI 168
++ +P++ D VT++D+N +GT++ T SYDG RI
Sbjct: 215 IREGGQDVPSNKD-VTSLDWNSEGTLLATGSYDGFARI 251
Score = 63 (27.2 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 224 IVSHRDPVISVASHPAKNIIASGALDNDRTMKIW-TQ 259
+ H++PV SVA P +ASG+ D + + IW TQ
Sbjct: 438 LTKHQEPVYSVAFSPDGRYLASGSFD--KCVHIWNTQ 472
Score = 44 (20.5 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 19 LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDST 61
L GH V ++ LL S S + T ++LS S ST
Sbjct: 165 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGST 207
>UNIPROTKB|E1BWK2 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006470 "protein dephosphorylation" evidence=IEA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031648 "protein destabilization"
evidence=IEA] [GO:0042347 "negative regulation of NF-kappaB import
into nucleus" evidence=IEA] [GO:0042753 "positive regulation of
circadian rhythm" evidence=IEA] [GO:0045862 "positive regulation of
proteolysis" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 GeneTree:ENSGT00690000101849 OMA:FDQWSEA
EMBL:AADN02035964 EMBL:AADN02035965 EMBL:AADN02035966
IPI:IPI00818493 Ensembl:ENSGALT00000041199 ArrayExpress:E1BWK2
Uniprot:E1BWK2
Length = 523
Score = 170 (64.9 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 49/166 (29%), Positives = 84/166 (50%)
Query: 18 TLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGHEQGIS 77
TL H AV +++FS+ L+ + S ++++ + ++S + D T L GH ++
Sbjct: 296 TLIHHNEAVLHLRFSNG--LMVTCSKDRSIAVWDMASPT--DITLRRVL---VGHRAAVN 348
Query: 78 --DL-----------ATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETI 124
D TI++W T ++TL GH + C+ + + +VS + + TI
Sbjct: 349 VVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTI 406
Query: 125 RIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
R+WDI+ G CL+VL H + V I F D IV+ +YDG ++ D
Sbjct: 407 RLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWD 450
Score = 170 (64.9 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 62/196 (31%), Positives = 92/196 (46%)
Query: 2 SSDRSL---ESFRP--YTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSIS 56
S DRS+ + P TL + L GH AV+ V F D + + S+S ++T+ +S S+
Sbjct: 318 SKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCE 375
Query: 57 NFDSTPPSPLQKFTGHEQGISDLA-------------TIRLWDVPTATSLKTLIGHTNYV 103
F T GH++GI+ L TIRLWD+ L+ L GH V
Sbjct: 376 -FVRT-------LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV 427
Query: 104 FCINFNPQSNRIVSDTFNETIRIWDIKTGK---------CLKVLPAHSDPVTAIDFNRDG 154
CI F+ + RIVS ++ I++WD++ CL+ L HS V + F D
Sbjct: 428 RCIRFD--NKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DE 483
Query: 155 TMIVTSSYDGLYRILD 170
I++SS+D I D
Sbjct: 484 FQIISSSHDDTILIWD 499
Score = 157 (60.3 bits), Expect = 7.8e-09, P = 7.8e-09
Identities = 51/190 (26%), Positives = 95/190 (50%)
Query: 75 GISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETI-RIWDIKTGK 133
G+ D +I++WD + LK L GHT V C+ ++ + IV+ + + T+ R+WD+ TG+
Sbjct: 236 GLRD-NSIKIWDKTSLECLKVLTGHTGSVLCLQYDERV--IVTGSSDSTVSRVWDVNTGE 292
Query: 134 CLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNG---KFILVGTLDNTLRL 190
L L H++ V + F+ +G M VT S D + D ++P + +LVG + +
Sbjct: 293 VLNTLIHHNEAVLHLRFS-NGLM-VTCSKDRSIAVWDMASPTDITLRRVLVGHRA-AVNV 349
Query: 191 WNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDN 250
++ + I+ SG K +ST + + H+ + + ++ SG+ DN
Sbjct: 350 VDFDDKYIVSA-SGDRTIKVWSTSTCEFV--RTLNGHKRGIACLQYRD--RLVVSGSSDN 404
Query: 251 DRTMKIWTQE 260
T+++W E
Sbjct: 405 --TIRLWDIE 412
Score = 144 (55.7 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 44/158 (27%), Positives = 82/158 (51%)
Query: 103 VFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSY 162
V+C+ ++ + +I+S + +I+IWD + +CLKVL H+ V + + D +IVT S
Sbjct: 223 VYCLQYDDE--KIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQY--DERVIVTGSS 278
Query: 163 DG-LYRILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNG 221
D + R+ D +T L+ + L L +S ++ + + + ++S +T
Sbjct: 279 DSTVSRVWDVNTGEVLNTLIHHNEAVLHL-RFSNGLMVTCSKDRSIAVWDMASPTDITLR 337
Query: 222 KYIVSHRDPVISVASHPAKNII-ASGALDNDRTMKIWT 258
+ +V HR ++V K I+ ASG DRT+K+W+
Sbjct: 338 RVLVGHR-AAVNVVDFDDKYIVSASG----DRTIKVWS 370
>MGI|MGI:2442144 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005669
"transcription factor TFIID complex" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISO] [GO:0016573 "histone acetylation"
evidence=ISO] [GO:0033276 "transcription factor TFTC complex"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:2442144
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0005669 HOVERGEN:HBG050226
KO:K03130 CTD:6877 OrthoDB:EOG469QW7 EMBL:AK031985 EMBL:AK088953
IPI:IPI00223695 RefSeq:NP_796316.2 UniGene:Mm.301522
ProteinModelPortal:Q8C092 SMR:Q8C092 STRING:Q8C092
PhosphoSite:Q8C092 PaxDb:Q8C092 PRIDE:Q8C092 DNASU:226182
GeneID:226182 KEGG:mmu:226182 UCSC:uc008hun.1 HOGENOM:HOG000212424
InParanoid:Q8C092 NextBio:378056 Genevestigator:Q8C092
GermOnline:ENSMUSG00000025049 Uniprot:Q8C092
Length = 801
Score = 172 (65.6 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 49/179 (27%), Positives = 81/179 (45%)
Query: 19 LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSIS--------NFD--STPPSPLQK 68
L GH V FS D L SSS + T+ +SL + + N+ T SP
Sbjct: 540 LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGY 599
Query: 69 FT---GHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIR 125
+ GH++ RLW L+ GH V C ++P SN + + + + T+R
Sbjct: 600 YFVSGGHDR------VARLWATDHYQPLRIFAGHLADVNCTRYHPNSNYVATGSADRTVR 653
Query: 126 IWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTL 184
+WD+ G C+++ H P+ ++ F+ +G + T + DG + D G ++VG L
Sbjct: 654 LWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDI----GHGLMVGEL 708
Score = 163 (62.4 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 60/242 (24%), Positives = 103/242 (42%)
Query: 19 LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGHEQGISD 78
LN + + ++ V + D L+ A+ T+ +S++ S + E SD
Sbjct: 468 LNAY-QGLTAVDVTDDSSLIAGGFADSTVRVWSVTP-KKLRSVKQASDLSLIDKE---SD 522
Query: 79 LATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVL 138
R+ D TA+ LK L GH+ V+ +F+P N ++S + + T+R+W ++T CL
Sbjct: 523 DVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGY 582
Query: 139 PAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYSTRKI 198
H+ PV F+ G V+ +D + R+ I G L + + Y
Sbjct: 583 KGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLAD-VNCTRYHPNS- 640
Query: 199 LKTYSGYTNSKYCISSTFSVTNGKYI---VSHRDPVISVASHPAKNIIASGALDNDRTMK 255
Y T S + V NG + H+ P+ S+ P +A+GA D R +
Sbjct: 641 --NYVA-TGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDG-RVL- 695
Query: 256 IW 257
+W
Sbjct: 696 LW 697
Score = 148 (57.2 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 29/97 (29%), Positives = 50/97 (51%)
Query: 75 GISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKC 134
G +D T+RLWDV ++ GH + + F+P + + + + +WDI G
Sbjct: 646 GSAD-RTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLM 704
Query: 135 LKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDA 171
+ L H+D V ++ F+RDG ++ + S D R+ DA
Sbjct: 705 VGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDA 741
Score = 134 (52.2 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 47/186 (25%), Positives = 76/186 (40%)
Query: 77 SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLK 136
S+ T+RLW + T T L GH V+ F+P VS + R+W + L+
Sbjct: 563 SEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLR 622
Query: 137 VLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYSTR 196
+ H V ++ + + T S D R+ D N I G L
Sbjct: 623 IFAGHLADVNCTRYHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNG 682
Query: 197 KILKTYSGYTNSKYCISST-FSVTNGKYIVSHRDPVISVASHPAKNIIASGALDNDRTMK 255
+ L T G T+ + + + G+ + H D V S+ I+ASG++DN T++
Sbjct: 683 RFLAT--GATDGRVLLWDIGHGLMVGE-LKGHTDTVCSLRFSRDGEILASGSMDN--TVR 737
Query: 256 IWTQEK 261
+W K
Sbjct: 738 LWDAVK 743
>TAIR|locus:2036823 [details] [associations]
symbol:AT1G62020 species:3702 "Arabidopsis thaliana"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005215 "transporter activity" evidence=ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=ISS] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0030244 "cellulose biosynthetic
process" evidence=RCA] [GO:0048193 "Golgi vesicle transport"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005886 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030126 EMBL:AC004392 EMBL:AY050400
EMBL:BT001048 IPI:IPI00528095 PIR:T02146 RefSeq:NP_176393.1
UniGene:At.48329 ProteinModelPortal:Q94A40 SMR:Q94A40 IntAct:Q94A40
STRING:Q94A40 PaxDb:Q94A40 PRIDE:Q94A40 EnsemblPlants:AT1G62020.1
GeneID:842497 KEGG:ath:AT1G62020 GeneFarm:2989 TAIR:At1g62020
HOGENOM:HOG000195913 InParanoid:Q94A40 KO:K05236 OMA:PLAADHI
PhylomeDB:Q94A40 ProtClustDB:CLSN2914500 Genevestigator:Q94A40
InterPro:IPR016391 PIRSF:PIRSF003354 Uniprot:Q94A40
Length = 1216
Score = 163 (62.4 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 54/185 (29%), Positives = 89/185 (48%)
Query: 77 SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLK 136
SD TIR+W+ + T + L GH +YV C +F+P+ + +VS + ++T+R+WDI +
Sbjct: 112 SDDQTIRIWNWQSRTCVSVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKT 171
Query: 137 VLPAHSDPVTAIDFNRD--GTM--IVTSSYDGLYRILD--ASTPNGKFILVGTLDNTLRL 190
V PA D + N D G + IV +G R ++ A P I+ G D ++L
Sbjct: 172 VSPA-DDIMRLTQMNSDLFGGVDAIVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKL 230
Query: 191 WNYSTRKI--LKTYSGYTNSKYCISSTFSVTNGKYIVSH-RDPVISVASHPAKNIIASGA 247
W + K + T G+ N+ +SS IVS+ D I V + + +
Sbjct: 231 WRMNETKAWEVDTLRGHMNN---VSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGLQTFR 287
Query: 248 LDNDR 252
++DR
Sbjct: 288 REHDR 292
Score = 144 (55.7 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 33/109 (30%), Positives = 58/109 (53%)
Query: 82 IRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAH 141
I++W+ L TL+GH +Y+ + F+ + IVS + ++TIRIW+ ++ C+ VL H
Sbjct: 75 IKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVSVLTGH 134
Query: 142 SDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRL 190
+ V F+ ++V++S D R+ D K V D+ +RL
Sbjct: 135 NHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKK--TVSPADDIMRL 181
Score = 54 (24.1 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 12/37 (32%), Positives = 22/37 (59%)
Query: 18 TLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS 54
TL GHL + V+F H+ + S+S ++T+ ++ S
Sbjct: 88 TLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQS 124
Score = 43 (20.2 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 234 VASHPAKNIIASGALDNDRTMKIWTQEKE 262
+A HP N++A+G +D M ++ E+E
Sbjct: 296 LAVHPEMNLLAAG---HDSGMIVFKLERE 321
>WB|WBGene00010556 [details] [associations]
symbol:rack-1 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0040017
"positive regulation of locomotion" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0006997 "nucleus organization" evidence=IMP] [GO:0007411 "axon
guidance" evidence=IMP] [GO:0048675 "axon extension" evidence=IMP]
[GO:0005813 "centrosome" evidence=IDA] [GO:0000281 "cytokinesis
after mitosis" evidence=IMP] [GO:0040038 "polar body extrusion
after meiotic divisions" evidence=IMP] [GO:0051304 "chromosome
separation" evidence=IMP] [GO:0000776 "kinetochore" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005635 "nuclear
envelope" evidence=IDA] [GO:0033365 "protein localization to
organelle" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008045 "motor neuron axon guidance"
evidence=IGI;IMP] [GO:0030426 "growth cone" evidence=IDA]
[GO:0030424 "axon" evidence=IDA] [GO:0044297 "cell body"
evidence=IDA] [GO:0030334 "regulation of cell migration"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0005737 GO:GO:0018991
GO:GO:0040010 GO:GO:0005635 GO:GO:0005813 GO:GO:0000776
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0040017 GO:GO:0030426 GO:GO:0030334
GO:GO:0008045 GO:GO:0040035 GO:GO:0000281 GO:GO:0033365
GO:GO:0040038 GO:GO:0044297 GO:GO:0006997 GO:GO:0048675 EMBL:Z69664
HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 PIR:T23309 RefSeq:NP_501859.1
ProteinModelPortal:Q21215 SMR:Q21215 DIP:DIP-26516N IntAct:Q21215
MINT:MINT-1071040 STRING:Q21215 World-2DPAGE:0020:Q21215
PaxDb:Q21215 PRIDE:Q21215 EnsemblMetazoa:K04D7.1.1
EnsemblMetazoa:K04D7.1.2 EnsemblMetazoa:K04D7.1.3
EnsemblMetazoa:K04D7.1.4 GeneID:177895 KEGG:cel:CELE_K04D7.1
UCSC:K04D7.1.1 CTD:177895 WormBase:K04D7.1 InParanoid:Q21215
NextBio:898836 GO:GO:0051304 Uniprot:Q21215
Length = 325
Score = 158 (60.7 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 43/157 (27%), Positives = 81/157 (51%)
Query: 33 HDGRLLTSSSAEKTLLTYSLSSISNFDSTPPS-PLQKFTGHEQGISDLA----------- 80
+D + SSS +KT+L + + S++ D P P++ TGH +SD+
Sbjct: 28 NDKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSLTGHNHFVSDVVISSDGQFALSG 87
Query: 81 ----TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLK 136
T+RLWD+ S + I HT V + F+ + +IVS + +++I++W+ +C
Sbjct: 88 SWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFSADNRQIVSGSRDKSIKLWNT-LAQCKY 146
Query: 137 VLP--AHSDPVTAIDF---NRDGTMIVTSSYDGLYRI 168
+ H+D V+ + F NRD +IV++ +D + ++
Sbjct: 147 TITDDCHTDWVSTVRFSPSNRD-PVIVSAGWDKVVKV 182
Score = 132 (51.5 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 53/181 (29%), Positives = 85/181 (46%)
Query: 17 QTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLS---SISNFDSTPPSPLQ-KFTGH 72
++L GH VS V S DG+ S S +KTL + L+ S F S L F+
Sbjct: 63 RSLTGHNHFVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFSAD 122
Query: 73 EQGI---SDLATIRLWDVPTATSLKTLIG---HTNYVFCINFNPQSNR---IVSDTFNET 123
+ I S +I+LW+ T K I HT++V + F+P SNR IVS +++
Sbjct: 123 NRQIVSGSRDKSIKLWN--TLAQCKYTITDDCHTDWVSTVRFSP-SNRDPVIVSAGWDKV 179
Query: 124 IRIWDIKTGKC-LKVLP-AHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILV 181
+++W++ G C LK H+ V + + DG++ + DG + D + + L
Sbjct: 180 VKVWNL--GNCRLKTNHIGHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLP 237
Query: 182 G 182
G
Sbjct: 238 G 238
Score = 42 (19.8 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 10/32 (31%), Positives = 14/32 (43%)
Query: 173 TPNGKFILVGTLDNTLRLWNYSTRKILKTYSG 204
+P+G G D LW+ + K L T G
Sbjct: 207 SPDGSLCASGGKDGQAMLWDLNEGKHLYTLPG 238
Score = 38 (18.4 bits), Expect = 5.8e-10, Sum P(2) = 5.8e-10
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 185 DNTLRLWNYSTRKILKT----YSGYTNS 208
D +++WN + LKT ++GY N+
Sbjct: 177 DKVVKVWNLGNCR-LKTNHIGHTGYVNT 203
>UNIPROTKB|Q21215 [details] [associations]
symbol:rack-1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009792 GO:GO:0005737
GO:GO:0018991 GO:GO:0040010 GO:GO:0005635 GO:GO:0005813
GO:GO:0000776 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040017 GO:GO:0030426
GO:GO:0030334 GO:GO:0008045 GO:GO:0040035 GO:GO:0000281
GO:GO:0033365 GO:GO:0040038 GO:GO:0044297 GO:GO:0006997
GO:GO:0048675 EMBL:Z69664 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM GeneTree:ENSGT00700000104461 PIR:T23309
RefSeq:NP_501859.1 ProteinModelPortal:Q21215 SMR:Q21215
DIP:DIP-26516N IntAct:Q21215 MINT:MINT-1071040 STRING:Q21215
World-2DPAGE:0020:Q21215 PaxDb:Q21215 PRIDE:Q21215
EnsemblMetazoa:K04D7.1.1 EnsemblMetazoa:K04D7.1.2
EnsemblMetazoa:K04D7.1.3 EnsemblMetazoa:K04D7.1.4 GeneID:177895
KEGG:cel:CELE_K04D7.1 UCSC:K04D7.1.1 CTD:177895 WormBase:K04D7.1
InParanoid:Q21215 NextBio:898836 GO:GO:0051304 Uniprot:Q21215
Length = 325
Score = 158 (60.7 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 43/157 (27%), Positives = 81/157 (51%)
Query: 33 HDGRLLTSSSAEKTLLTYSLSSISNFDSTPPS-PLQKFTGHEQGISDLA----------- 80
+D + SSS +KT+L + + S++ D P P++ TGH +SD+
Sbjct: 28 NDKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSLTGHNHFVSDVVISSDGQFALSG 87
Query: 81 ----TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLK 136
T+RLWD+ S + I HT V + F+ + +IVS + +++I++W+ +C
Sbjct: 88 SWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFSADNRQIVSGSRDKSIKLWNT-LAQCKY 146
Query: 137 VLP--AHSDPVTAIDF---NRDGTMIVTSSYDGLYRI 168
+ H+D V+ + F NRD +IV++ +D + ++
Sbjct: 147 TITDDCHTDWVSTVRFSPSNRD-PVIVSAGWDKVVKV 182
Score = 132 (51.5 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 53/181 (29%), Positives = 85/181 (46%)
Query: 17 QTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLS---SISNFDSTPPSPLQ-KFTGH 72
++L GH VS V S DG+ S S +KTL + L+ S F S L F+
Sbjct: 63 RSLTGHNHFVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFSAD 122
Query: 73 EQGI---SDLATIRLWDVPTATSLKTLIG---HTNYVFCINFNPQSNR---IVSDTFNET 123
+ I S +I+LW+ T K I HT++V + F+P SNR IVS +++
Sbjct: 123 NRQIVSGSRDKSIKLWN--TLAQCKYTITDDCHTDWVSTVRFSP-SNRDPVIVSAGWDKV 179
Query: 124 IRIWDIKTGKC-LKVLP-AHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILV 181
+++W++ G C LK H+ V + + DG++ + DG + D + + L
Sbjct: 180 VKVWNL--GNCRLKTNHIGHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLP 237
Query: 182 G 182
G
Sbjct: 238 G 238
Score = 42 (19.8 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 10/32 (31%), Positives = 14/32 (43%)
Query: 173 TPNGKFILVGTLDNTLRLWNYSTRKILKTYSG 204
+P+G G D LW+ + K L T G
Sbjct: 207 SPDGSLCASGGKDGQAMLWDLNEGKHLYTLPG 238
Score = 38 (18.4 bits), Expect = 5.8e-10, Sum P(2) = 5.8e-10
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 185 DNTLRLWNYSTRKILKT----YSGYTNS 208
D +++WN + LKT ++GY N+
Sbjct: 177 DKVVKVWNLGNCR-LKTNHIGHTGYVNT 203
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 170 (64.9 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 50/188 (26%), Positives = 86/188 (45%)
Query: 78 DLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKV 137
D + LW + + +L GHT+ V + N IV+ + + +IR+WD++ K L+
Sbjct: 41 DDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRT 100
Query: 138 LPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYSTR- 196
L H + ++DF+ G + + S D ++ D F G +R +S
Sbjct: 101 LMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGH-SQAVRCLRFSPDG 159
Query: 197 KILKTYSGYTNSKYCISSTFSVTNGKYIVS---HRDPVISVASHPAKNIIASGALDNDRT 253
K L + + K + +T GK + H PV V HP + ++ASG+ +DRT
Sbjct: 160 KWLASAADDHTVKL-----WDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGS--SDRT 212
Query: 254 MKIWTQEK 261
++ W EK
Sbjct: 213 IRFWDLEK 220
Score = 155 (59.6 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 39/163 (23%), Positives = 71/163 (43%)
Query: 18 TLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSI----------SNFDSTPPSPLQ 67
+L GH V V+ + L+ + S ++ + L + +N S P
Sbjct: 58 SLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYG 117
Query: 68 KFTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIW 127
+F G D I+LWD+ + GH+ V C+ F+P + S + T+++W
Sbjct: 118 EFVA--SGSQD-TNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLW 174
Query: 128 DIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
D+ GK + P H+ PV ++F+ + ++ + S D R D
Sbjct: 175 DLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWD 217
>ZFIN|ZDB-GENE-040426-2903 [details] [associations]
symbol:fbxw11b "F-box and WD-40 domain protein
11b" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-040426-2903 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:BX465186
EMBL:BC056809 IPI:IPI00494842 RefSeq:NP_998669.2 UniGene:Dr.75211
SMR:Q6PGW4 STRING:Q6PGW4 Ensembl:ENSDART00000019252 GeneID:406825
KEGG:dre:406825 CTD:406825 InParanoid:Q6PGW4 NextBio:20818332
Uniprot:Q6PGW4
Length = 527
Score = 169 (64.5 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 64/206 (31%), Positives = 99/206 (48%)
Query: 2 SSDRSL---ESFRP--YTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSIS 56
S DRS+ + P +L + L GH AV+ V F D + + S+S ++T+ +S S+
Sbjct: 322 SKDRSIAVWDMASPTDISLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCE 379
Query: 57 NFDSTPPSPLQKFTGHEQGISDLA-------------TIRLWDVPTATSLKTLIGHTNYV 103
F T GH++GI+ L TIRLWD+ L+ L GH V
Sbjct: 380 -FVRT-------LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV 431
Query: 104 FCINFNPQSNRIVSDTFNETIRIWDIKTGK---------CLKVLPAHSDPVTAIDFNRDG 154
CI F+ + RIVS ++ I++WD++ CL+ L HS V + F D
Sbjct: 432 RCIRFD--NKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DE 487
Query: 155 TMIVTSSYDG---LYRILDASTPNGK 177
I++SS+D ++ L+ ST NG+
Sbjct: 488 FQIISSSHDDTILIWDFLNVST-NGQ 512
Score = 167 (63.8 bits), Expect = 4.7e-10, P = 4.7e-10
Identities = 47/166 (28%), Positives = 82/166 (49%)
Query: 18 TLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGHEQGIS 77
TL H AV +++F + L+ + S ++++ + ++S T S + GH ++
Sbjct: 300 TLIHHNEAVLHLRFCNG--LMVTCSKDRSIAVWDMAS-----PTDISLRRVLVGHRAAVN 352
Query: 78 --DL-----------ATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETI 124
D TI++W T ++TL GH + C+ + + +VS + + TI
Sbjct: 353 VVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTI 410
Query: 125 RIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
R+WDI+ G CL+VL H + V I F D IV+ +YDG ++ D
Sbjct: 411 RLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWD 454
Score = 161 (61.7 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 51/189 (26%), Positives = 94/189 (49%)
Query: 75 GISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKC 134
G+ D +I++WD T LK L GHT V C+ ++ + IV+ + + T+R+WD+ +G+
Sbjct: 241 GLRD-NSIKIWDKQTLECLKILTGHTGSVLCLQYDERV--IVTGSSDSTVRVWDVNSGEV 297
Query: 135 LKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNG---KFILVGTLDNTLRLW 191
L L H++ V + F +G M VT S D + D ++P + +LVG + +
Sbjct: 298 LNTLIHHNEAVLHLRFC-NGLM-VTCSKDRSIAVWDMASPTDISLRRVLVGHRA-AVNVV 354
Query: 192 NYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDND 251
++ + I+ SG K +ST + + H+ + + ++ SG+ DN
Sbjct: 355 DFDDKYIVSA-SGDRTIKVWSTSTCEFV--RTLNGHKRGIACLQYRD--RLVVSGSSDN- 408
Query: 252 RTMKIWTQE 260
T+++W E
Sbjct: 409 -TIRLWDIE 416
Score = 144 (55.7 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 41/157 (26%), Positives = 81/157 (51%)
Query: 103 VFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSY 162
V+C+ ++ + +I+S + +I+IWD +T +CLK+L H+ V + + D +IVT S
Sbjct: 228 VYCLQYDDE--KIISGLRDNSIKIWDKQTLECLKILTGHTGSVLCLQY--DERVIVTGSS 283
Query: 163 DGLYRILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGK 222
D R+ D ++ L+ + L L + ++ + + + ++S ++ +
Sbjct: 284 DSTVRVWDVNSGEVLNTLIHHNEAVLHL-RFCNGLMVTCSKDRSIAVWDMASPTDISLRR 342
Query: 223 YIVSHRDPVISVASHPAKNII-ASGALDNDRTMKIWT 258
+V HR ++V K I+ ASG DRT+K+W+
Sbjct: 343 VLVGHR-AAVNVVDFDDKYIVSASG----DRTIKVWS 374
>ZFIN|ZDB-GENE-030131-6305 [details] [associations]
symbol:fbxw11a "F-box and WD-40 domain protein
11a" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-030131-6305 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
HSSP:Q9Y297 GeneTree:ENSGT00690000101849 EMBL:CABZ01001943
EMBL:CABZ01001944 EMBL:CABZ01001945 EMBL:CABZ01001946 EMBL:BC045356
IPI:IPI00502564 RefSeq:NP_958467.1 UniGene:Dr.78612 SMR:Q7ZVZ1
STRING:Q7ZVZ1 Ensembl:ENSDART00000036901 GeneID:334373
KEGG:dre:334373 CTD:334373 OMA:MESQINT NextBio:20810369
Uniprot:Q7ZVZ1
Length = 527
Score = 169 (64.5 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 47/166 (28%), Positives = 83/166 (50%)
Query: 18 TLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGHEQGIS 77
TL H AV +++F + L+ + S ++++ + ++S +T S + GH ++
Sbjct: 300 TLIHHNEAVLHLRFCNG--LMVTCSKDRSIAVWDMAS-----ATDISLRRVLVGHRAAVN 352
Query: 78 --DL-----------ATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETI 124
D TI++W T ++TL GH + C+ + + +VS + + TI
Sbjct: 353 VVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTI 410
Query: 125 RIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
R+WDI+ G CL+VL H + V I F D IV+ +YDG ++ D
Sbjct: 411 RLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWD 454
Score = 167 (63.8 bits), Expect = 4.7e-10, P = 4.7e-10
Identities = 61/196 (31%), Positives = 91/196 (46%)
Query: 2 SSDRSLE-----SFRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSIS 56
S DRS+ S +L + L GH AV+ V F D + + S+S ++T+ +S S+
Sbjct: 322 SKDRSIAVWDMASATDISLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCE 379
Query: 57 NFDSTPPSPLQKFTGHEQGISDLA-------------TIRLWDVPTATSLKTLIGHTNYV 103
F T GH++GI+ L TIRLWD+ L+ L GH V
Sbjct: 380 -FVRT-------LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV 431
Query: 104 FCINFNPQSNRIVSDTFNETIRIWDIKTGK---------CLKVLPAHSDPVTAIDFNRDG 154
CI F+ + RIVS ++ I++WD++ CL+ L HS V + F D
Sbjct: 432 RCIRFD--NKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DE 487
Query: 155 TMIVTSSYDGLYRILD 170
I++SS+D I D
Sbjct: 488 FQIISSSHDDTILIWD 503
Score = 150 (57.9 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 49/189 (25%), Positives = 93/189 (49%)
Query: 75 GISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKC 134
G+ D +I++WD + LK L GHT V C+ ++ + IV+ + + T+R+WD+ +G+
Sbjct: 241 GLRD-NSIKIWDKQSLECLKVLTGHTGSVLCLQYDERV--IVTGSSDSTVRVWDVSSGEV 297
Query: 135 LKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNG---KFILVGTLDNTLRLW 191
L L H++ V + F +G M VT S D + D ++ + +LVG + +
Sbjct: 298 LNTLIHHNEAVLHLRFC-NGLM-VTCSKDRSIAVWDMASATDISLRRVLVGHRA-AVNVV 354
Query: 192 NYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDND 251
++ + I+ SG K +ST + + H+ + + ++ SG+ DN
Sbjct: 355 DFDDKYIVSA-SGDRTIKVWSTSTCEFV--RTLNGHKRGIACLQYRD--RLVVSGSSDN- 408
Query: 252 RTMKIWTQE 260
T+++W E
Sbjct: 409 -TIRLWDIE 416
Score = 145 (56.1 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 42/157 (26%), Positives = 81/157 (51%)
Query: 103 VFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSY 162
V+C+ ++ ++I+S + +I+IWD ++ +CLKVL H+ V + + D +IVT S
Sbjct: 228 VYCLQYD--DDKIISGLRDNSIKIWDKQSLECLKVLTGHTGSVLCLQY--DERVIVTGSS 283
Query: 163 DGLYRILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGK 222
D R+ D S+ L+ + L L + ++ + + + ++S ++ +
Sbjct: 284 DSTVRVWDVSSGEVLNTLIHHNEAVLHL-RFCNGLMVTCSKDRSIAVWDMASATDISLRR 342
Query: 223 YIVSHRDPVISVASHPAKNII-ASGALDNDRTMKIWT 258
+V HR ++V K I+ ASG DRT+K+W+
Sbjct: 343 VLVGHR-AAVNVVDFDDKYIVSASG----DRTIKVWS 374
>UNIPROTKB|E1C4U3 [details] [associations]
symbol:E1C4U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:ERQNNQI EMBL:AADN02030830
EMBL:AADN02030831 IPI:IPI00579493 ProteinModelPortal:E1C4U3
Ensembl:ENSGALT00000013413 Uniprot:E1C4U3
Length = 780
Score = 171 (65.3 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 50/179 (27%), Positives = 80/179 (44%)
Query: 19 LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSIS--------NFD--STPPSPLQK 68
L GH V FS D L S S + T+ +SL + + N+ T SP
Sbjct: 519 LYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGY 578
Query: 69 FT---GHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIR 125
+ GH++ RLW L+ GH V C F+P SN I + + + T+R
Sbjct: 579 YFVSGGHDR------VARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRTVR 632
Query: 126 IWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTL 184
+WD+ G C+++ H P+ ++ F+ +G + T + DG + D G ++VG L
Sbjct: 633 LWDVLNGNCVRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWDI----GHGLMVGEL 687
Score = 165 (63.1 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 61/243 (25%), Positives = 107/243 (44%)
Query: 19 LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGHEQGISD 78
LN + + ++ V + D ++ A+ T+ +S++ S + E SD
Sbjct: 447 LNAY-QGLTAVDITDDSSMIVGGFADSTVRVWSVTP-KKLRSVKAAADLSLIDKE---SD 501
Query: 79 LATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVL 138
R+ D TA+ LK L GH+ V+ +F+P N ++S + + T+R+W ++T CL
Sbjct: 502 DVLERIMDEKTASELKILYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLVGY 561
Query: 139 PAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTL-DNTLRLWNYSTRK 197
H+ PV F+ G V+ +D + R+ I G L D T ++ ++
Sbjct: 562 KGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNY 621
Query: 198 ILKTYSGYTNSKYCISSTFSVTNGKYI---VSHRDPVISVASHPAKNIIASGALDNDRTM 254
I T S + V NG + H+ P+ S+A P +A+GA D R +
Sbjct: 622 IA------TGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGRFLATGATDG-RVL 674
Query: 255 KIW 257
+W
Sbjct: 675 -LW 676
Score = 147 (56.8 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 29/97 (29%), Positives = 50/97 (51%)
Query: 75 GISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKC 134
G +D T+RLWDV ++ GH + + F+P + + + + +WDI G
Sbjct: 625 GSAD-RTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWDIGHGLM 683
Query: 135 LKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDA 171
+ L H+D + A+ F+RDG ++ + S D R+ DA
Sbjct: 684 VGELKGHTDTIYALRFSRDGEILASGSMDNTVRLWDA 720
Score = 138 (53.6 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 48/186 (25%), Positives = 77/186 (41%)
Query: 77 SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLK 136
S+ T+RLW + T T L GH V+ F+P VS + R+W + L+
Sbjct: 542 SEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLR 601
Query: 137 VLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYSTR 196
+ H VT F+ + I T S D R+ D N I G L
Sbjct: 602 IFAGHLADVTCTRFHPNSNYIATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNG 661
Query: 197 KILKTYSGYTNSKYCISST-FSVTNGKYIVSHRDPVISVASHPAKNIIASGALDNDRTMK 255
+ L T G T+ + + + G+ + H D + ++ I+ASG++DN T++
Sbjct: 662 RFLAT--GATDGRVLLWDIGHGLMVGE-LKGHTDTIYALRFSRDGEILASGSMDN--TVR 716
Query: 256 IWTQEK 261
+W K
Sbjct: 717 LWDAVK 722
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 170 (64.9 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 50/188 (26%), Positives = 86/188 (45%)
Query: 78 DLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKV 137
D + LW + + +L GHT+ V + N IV+ + + +IR+WD++ K L+
Sbjct: 41 DDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRT 100
Query: 138 LPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYSTR- 196
L H + ++DF+ G + + S D ++ D F G +R +S
Sbjct: 101 LMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGH-SQAVRCLRFSPDG 159
Query: 197 KILKTYSGYTNSKYCISSTFSVTNGKYIVS---HRDPVISVASHPAKNIIASGALDNDRT 253
K L + + K + +T GK + H PV V HP + ++ASG+ +DRT
Sbjct: 160 KWLASAADDHTVKL-----WDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGS--SDRT 212
Query: 254 MKIWTQEK 261
++ W EK
Sbjct: 213 IRFWDLEK 220
Score = 155 (59.6 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 39/163 (23%), Positives = 71/163 (43%)
Query: 18 TLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSI----------SNFDSTPPSPLQ 67
+L GH V V+ + L+ + S ++ + L + +N S P
Sbjct: 58 SLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYG 117
Query: 68 KFTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIW 127
+F G D I+LWD+ + GH+ V C+ F+P + S + T+++W
Sbjct: 118 EFVA--SGSQD-TNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLW 174
Query: 128 DIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
D+ GK + P H+ PV ++F+ + ++ + S D R D
Sbjct: 175 DLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWD 217
Score = 133 (51.9 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 34/158 (21%), Positives = 69/158 (43%)
Query: 15 LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSL---SSISNFDSTPPSP-LQKFT 70
+ +TL GH + + F G + S S + + + + + + + +F+
Sbjct: 97 ILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFS 156
Query: 71 GHEQGISDLA---TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIW 127
+ ++ A T++LWD+ + GHT V + F+P + S + + TIR W
Sbjct: 157 PDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFW 216
Query: 128 DIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGL 165
D++ + + + PV ++ FN DG + + D L
Sbjct: 217 DLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSL 254
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 170 (64.9 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 50/188 (26%), Positives = 86/188 (45%)
Query: 78 DLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKV 137
D + LW + + +L GHT+ V + N IV+ + + +IR+WD++ K L+
Sbjct: 41 DDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRT 100
Query: 138 LPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYSTR- 196
L H + ++DF+ G + + S D ++ D F G +R +S
Sbjct: 101 LMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGH-SQAVRCLRFSPDG 159
Query: 197 KILKTYSGYTNSKYCISSTFSVTNGKYIVS---HRDPVISVASHPAKNIIASGALDNDRT 253
K L + + K + +T GK + H PV V HP + ++ASG+ +DRT
Sbjct: 160 KWLASAADDHTVKL-----WDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGS--SDRT 212
Query: 254 MKIWTQEK 261
++ W EK
Sbjct: 213 IRFWDLEK 220
Score = 155 (59.6 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 39/163 (23%), Positives = 71/163 (43%)
Query: 18 TLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSI----------SNFDSTPPSPLQ 67
+L GH V V+ + L+ + S ++ + L + +N S P
Sbjct: 58 SLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYG 117
Query: 68 KFTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIW 127
+F G D I+LWD+ + GH+ V C+ F+P + S + T+++W
Sbjct: 118 EFVA--SGSQD-TNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLW 174
Query: 128 DIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
D+ GK + P H+ PV ++F+ + ++ + S D R D
Sbjct: 175 DLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWD 217
Score = 133 (51.9 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 34/158 (21%), Positives = 69/158 (43%)
Query: 15 LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSL---SSISNFDSTPPSP-LQKFT 70
+ +TL GH + + F G + S S + + + + + + + +F+
Sbjct: 97 ILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFS 156
Query: 71 GHEQGISDLA---TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIW 127
+ ++ A T++LWD+ + GHT V + F+P + S + + TIR W
Sbjct: 157 PDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFW 216
Query: 128 DIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGL 165
D++ + + + PV ++ FN DG + + D L
Sbjct: 217 DLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSL 254
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 170 (64.9 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 50/188 (26%), Positives = 86/188 (45%)
Query: 78 DLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKV 137
D + LW + + +L GHT+ V + N IV+ + + +IR+WD++ K L+
Sbjct: 41 DDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRT 100
Query: 138 LPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYSTR- 196
L H + ++DF+ G + + S D ++ D F G +R +S
Sbjct: 101 LMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGH-SQAVRCLRFSPDG 159
Query: 197 KILKTYSGYTNSKYCISSTFSVTNGKYIVS---HRDPVISVASHPAKNIIASGALDNDRT 253
K L + + K + +T GK + H PV V HP + ++ASG+ +DRT
Sbjct: 160 KWLASAADDHTVKL-----WDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGS--SDRT 212
Query: 254 MKIWTQEK 261
++ W EK
Sbjct: 213 IRFWDLEK 220
Score = 155 (59.6 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 39/163 (23%), Positives = 71/163 (43%)
Query: 18 TLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSI----------SNFDSTPPSPLQ 67
+L GH V V+ + L+ + S ++ + L + +N S P
Sbjct: 58 SLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYG 117
Query: 68 KFTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIW 127
+F G D I+LWD+ + GH+ V C+ F+P + S + T+++W
Sbjct: 118 EFVA--SGSQD-TNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLW 174
Query: 128 DIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
D+ GK + P H+ PV ++F+ + ++ + S D R D
Sbjct: 175 DLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWD 217
Score = 133 (51.9 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 34/158 (21%), Positives = 69/158 (43%)
Query: 15 LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSL---SSISNFDSTPPSP-LQKFT 70
+ +TL GH + + F G + S S + + + + + + + +F+
Sbjct: 97 ILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFS 156
Query: 71 GHEQGISDLA---TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIW 127
+ ++ A T++LWD+ + GHT V + F+P + S + + TIR W
Sbjct: 157 PDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFW 216
Query: 128 DIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGL 165
D++ + + + PV ++ FN DG + + D L
Sbjct: 217 DLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSL 254
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 170 (64.9 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 50/188 (26%), Positives = 86/188 (45%)
Query: 78 DLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKV 137
D + LW + + +L GHT+ V + N IV+ + + +IR+WD++ K L+
Sbjct: 41 DDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRT 100
Query: 138 LPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYSTR- 196
L H + ++DF+ G + + S D ++ D F G +R +S
Sbjct: 101 LMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGH-SQAVRCLRFSPDG 159
Query: 197 KILKTYSGYTNSKYCISSTFSVTNGKYIVS---HRDPVISVASHPAKNIIASGALDNDRT 253
K L + + K + +T GK + H PV V HP + ++ASG+ +DRT
Sbjct: 160 KWLASAADDHTVKL-----WDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGS--SDRT 212
Query: 254 MKIWTQEK 261
++ W EK
Sbjct: 213 IRFWDLEK 220
Score = 155 (59.6 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 39/163 (23%), Positives = 71/163 (43%)
Query: 18 TLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSI----------SNFDSTPPSPLQ 67
+L GH V V+ + L+ + S ++ + L + +N S P
Sbjct: 58 SLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYG 117
Query: 68 KFTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIW 127
+F G D I+LWD+ + GH+ V C+ F+P + S + T+++W
Sbjct: 118 EFVA--SGSQD-TNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLW 174
Query: 128 DIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
D+ GK + P H+ PV ++F+ + ++ + S D R D
Sbjct: 175 DLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWD 217
Score = 133 (51.9 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 34/158 (21%), Positives = 69/158 (43%)
Query: 15 LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSL---SSISNFDSTPPSP-LQKFT 70
+ +TL GH + + F G + S S + + + + + + + +F+
Sbjct: 97 ILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFS 156
Query: 71 GHEQGISDLA---TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIW 127
+ ++ A T++LWD+ + GHT V + F+P + S + + TIR W
Sbjct: 157 PDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFW 216
Query: 128 DIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGL 165
D++ + + + PV ++ FN DG + + D L
Sbjct: 217 DLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSL 254
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 170 (64.9 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 50/188 (26%), Positives = 86/188 (45%)
Query: 78 DLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKV 137
D + LW + + +L GHT+ V + N IV+ + + +IR+WD++ K L+
Sbjct: 41 DDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRT 100
Query: 138 LPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYSTR- 196
L H + ++DF+ G + + S D ++ D F G +R +S
Sbjct: 101 LMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGH-SQAVRCLRFSPDG 159
Query: 197 KILKTYSGYTNSKYCISSTFSVTNGKYIVS---HRDPVISVASHPAKNIIASGALDNDRT 253
K L + + K + +T GK + H PV V HP + ++ASG+ +DRT
Sbjct: 160 KWLASAADDHTVKL-----WDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGS--SDRT 212
Query: 254 MKIWTQEK 261
++ W EK
Sbjct: 213 IRFWDLEK 220
Score = 155 (59.6 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 39/163 (23%), Positives = 71/163 (43%)
Query: 18 TLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSI----------SNFDSTPPSPLQ 67
+L GH V V+ + L+ + S ++ + L + +N S P
Sbjct: 58 SLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYG 117
Query: 68 KFTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIW 127
+F G D I+LWD+ + GH+ V C+ F+P + S + T+++W
Sbjct: 118 EFVA--SGSQD-TNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLW 174
Query: 128 DIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
D+ GK + P H+ PV ++F+ + ++ + S D R D
Sbjct: 175 DLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWD 217
Score = 134 (52.2 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 35/158 (22%), Positives = 69/158 (43%)
Query: 15 LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSL---SSISNFDSTPPSP-LQKFT 70
+ +TL GH + + F G + S S + + + + + + + +F+
Sbjct: 97 ILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFS 156
Query: 71 GHEQGISDLA---TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIW 127
+ ++ A T++LWD+ + GHT V + F+P + S + + TIR W
Sbjct: 157 PDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFW 216
Query: 128 DIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGL 165
D++ + + + PV +I FN DG + + D L
Sbjct: 217 DLEKFQVVSCIEGEPGPVRSILFNPDGCCLYSGCQDSL 254
>UNIPROTKB|B7TCI5 [details] [associations]
symbol:TBL1X "Transducin beta-like 1" species:9913 "Bos
taurus" [GO:0006508 "proteolysis" evidence=ISS] [GO:0007605
"sensory perception of sound" evidence=ISS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0008013 "beta-catenin binding" evidence=ISS]
[GO:0042393 "histone binding" evidence=ISS] [GO:0005876 "spindle
microtubule" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006508
GO:GO:0003682 GO:GO:0005667 GO:GO:0000122 GO:GO:0044212
GO:GO:0007605 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0045444 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 GeneTree:ENSGT00690000102024 KO:K04508
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:6907
OMA:RAHSVNN EMBL:FJ195366 EMBL:DAAA02075574 IPI:IPI00717120
RefSeq:NP_001138704.1 UniGene:Bt.27699 STRING:B7TCI5
Ensembl:ENSBTAT00000024105 GeneID:515972 KEGG:bta:515972
NextBio:20872077 Uniprot:B7TCI5
Length = 528
Score = 149 (57.5 bits), Expect = 6.1e-09, Sum P(2) = 6.1e-09
Identities = 32/112 (28%), Positives = 59/112 (52%)
Query: 77 SDLATIRLWDVPTATSLKTLIGHTNYVFCINF--------NPQSN-RIVSDTFNETIRIW 127
SD T+++W + T + L H+ ++ I + NP S+ + S +F+ T+R+W
Sbjct: 382 SDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLW 441
Query: 128 DIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFI 179
D++ G CL L H +PV ++ F+ DG + + S+D I + T +G +
Sbjct: 442 DVERGVCLHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWN--TQSGSLV 491
Score = 147 (56.8 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 55/220 (25%), Positives = 94/220 (42%)
Query: 15 LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISN-----FDSTPPSPL--Q 67
L TL H + +K++ G + S+ +KT + + + F S P + Q
Sbjct: 272 LASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ 331
Query: 68 KFTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIW 127
T +D+ I + + +KT GHTN V I ++P + S + + T++IW
Sbjct: 332 NNTTFASCSTDMC-IHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIW 390
Query: 128 DIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVG-TLDN 186
+K C+ L AHS + I ++ G S PN +L + D+
Sbjct: 391 SMKQDTCVHDLQAHSKEIYTIKWSPTGPA--------------TSNPNSSIMLASASFDS 436
Query: 187 TLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVS 226
T+RLW+ L T + + Y ++ FS +GKY+ S
Sbjct: 437 TVRLWDVERGVCLHTLTKHQEPVYSVA--FS-PDGKYLAS 473
Score = 123 (48.4 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 33/99 (33%), Positives = 53/99 (53%)
Query: 86 DVPTATSLKTLI-GHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGK----------- 133
DV S T++ GH + VF +NP S+ + S + + T RIW++
Sbjct: 168 DVEIPPSKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRH 227
Query: 134 CLKV----LPAHSDPVTAIDFNRDGTMIVTSSYDGLYRI 168
C++ +P++ D VT++D+N DGT++ T SYDG RI
Sbjct: 228 CIREGGHDVPSNKD-VTSLDWNSDGTLLATGSYDGFARI 265
Score = 63 (27.2 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 224 IVSHRDPVISVASHPAKNIIASGALDNDRTMKIW-TQ 259
+ H++PV SVA P +ASG+ D + + IW TQ
Sbjct: 452 LTKHQEPVYSVAFSPDGKYLASGSFD--KCVHIWNTQ 486
Score = 48 (22.0 bits), Expect = 6.1e-09, Sum P(2) = 6.1e-09
Identities = 15/50 (30%), Positives = 22/50 (44%)
Query: 12 PYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDST 61
P + L GH V ++ LL S S + T ++L+ SN ST
Sbjct: 172 PPSKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGST 221
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 169 (64.5 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 54/191 (28%), Positives = 95/191 (49%)
Query: 75 GISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKC 134
G D T+++WD+ T T GH ++ ++++ IVS + ++ +IWDI+ GKC
Sbjct: 345 GAED-KTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAKIWDIEKGKC 403
Query: 135 LKVLPAHS-DP---VTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFI--LVGTLDNTL 188
L P VT++ + DG ++ S D + R+ DA T G F+ G LD+
Sbjct: 404 AFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQT--GYFLERYEGHLDSVY 461
Query: 189 RLWNYSTRKILKTYSGYTNSK-YCISSTFSVTNGKYIVS-HRDPVISVASHPAKNIIASG 246
+ K L + S + K + +S + S + + + H+D V+SVA P + + SG
Sbjct: 462 SVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSPDGSWLISG 521
Query: 247 ALDNDRTMKIW 257
+ DR+++ W
Sbjct: 522 S--KDRSVQFW 530
Score = 150 (57.9 bits), Expect = 7.5e-09, Sum P(2) = 7.5e-09
Identities = 41/183 (22%), Positives = 78/183 (42%)
Query: 15 LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLS------SISNFDSTPPSPLQK 68
+ T GH + + +S DGR + S S +K + + ++ N + P + +
Sbjct: 361 IQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTS 420
Query: 69 FTGHEQG----ISDLATI-RLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNET 123
G L I RLWD T L+ GH + V+ + F+P + S + +++
Sbjct: 421 VAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSLASGSLDKS 480
Query: 124 IRIWDIK----TGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFI 179
+++WD+ +C H D V ++ F+ DG+ +++ S D + D +
Sbjct: 481 LKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWDPRNGTTHMM 540
Query: 180 LVG 182
L G
Sbjct: 541 LQG 543
Score = 135 (52.6 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 44/187 (23%), Positives = 84/187 (44%)
Query: 83 RLWDVPTATSLKTLIGHTN-----YVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKV 137
+++DV T + + + Y+ + F+P N + + ++T+++WDI T K
Sbjct: 305 QIYDVDTGKKVHAFVDESEKDGDLYIRSVCFSPDGNYLATGAEDKTVKVWDIHTKKIQHT 364
Query: 138 LPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFIL----VGTLDNTLRLWNY 193
H + ++D++ DG IV+ S D +I D F L VG + +
Sbjct: 365 FYGHELDIYSLDYSSDGRFIVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMS 424
Query: 194 STRKILKTYSGYTNSKYCISSTFSVTNGKYIV---SHRDPVISVASHPAKNIIASGALDN 250
+++ +G ++ I + G ++ H D V SVA P +ASG+LD
Sbjct: 425 PDGRLVA--AGSLDN---IVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSLASGSLD- 478
Query: 251 DRTMKIW 257
+++K+W
Sbjct: 479 -KSLKLW 484
Score = 120 (47.3 bits), Expect = 0.00018, P = 0.00018
Identities = 42/168 (25%), Positives = 81/168 (48%)
Query: 99 HTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDP-----VTAIDFNRD 153
H + V C+NF+ + ++ N + +I+D+ TGK + S+ + ++ F+ D
Sbjct: 280 HNSVVCCVNFS-NDGKYLATGCNRSAQIYDVDTGKKVHAFVDESEKDGDLYIRSVCFSPD 338
Query: 154 GTMIVTSSYDGLYRILDASTPNGKFILVG-TLDNTLRLWNYSTR-KILKTYSGYTNSK-Y 210
G + T + D ++ D T + G LD + +YS+ + + + SG +K +
Sbjct: 339 GNYLATGAEDKTVKVWDIHTKKIQHTFYGHELD--IYSLDYSSDGRFIVSGSGDKKAKIW 396
Query: 211 CISS-TFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDNDRTMKIW 257
I + T G V ++ V SVA P ++A+G+LDN +++W
Sbjct: 397 DIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDN--IVRLW 442
Score = 47 (21.6 bits), Expect = 7.5e-09, Sum P(2) = 7.5e-09
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 219 TNGKYIVSHRDPVISVASHPAKN---IIASGALDNDRTMKIW 257
T + H++ VISVA P N + A+G+ D ++W
Sbjct: 536 TTHMMLQGHKNSVISVALSPKNNSHGVFATGS--GDFRSRLW 575
>UNIPROTKB|F1NM37 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 OMA:HHFRGSP GeneTree:ENSGT00690000102183
EMBL:AADN02023671 EMBL:AADN02023670 IPI:IPI00583117
Ensembl:ENSGALT00000008918 Uniprot:F1NM37
Length = 812
Score = 150 (57.9 bits), Expect = 9.9e-08, P = 9.9e-08
Identities = 49/169 (28%), Positives = 80/169 (47%)
Query: 12 PYTL--TQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKF 69
P TL T GH + ++ V S + +L+ + S ++ +S S L F
Sbjct: 477 PETLHAQMTERGHDKDINSVAVSPNDKLIATGSQDRLAKLWSCPDCSL--------LGVF 528
Query: 70 TGHEQGI-------SD--LAT------IRLWDVPTATSLKTLIGHTNYVFCINFNPQSNR 114
TGH++GI D LAT ++LW + + LKT GH V I F + +
Sbjct: 529 TGHKRGIWCVQFSPVDQILATSSADGTLKLWGLQDFSCLKTFEGHDASVLKIIFVSRGTQ 588
Query: 115 IVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYD 163
++S + +++W IKT +C+K L H D + + N+ M+VT+S D
Sbjct: 589 LLSGGSDGLLKLWTIKTNECVKTLDGHEDKIWGLHTNKQDDMVVTASSD 637
Score = 146 (56.5 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 37/142 (26%), Positives = 62/142 (43%)
Query: 57 NFDSTPPSPLQKFTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIV 116
+ +S SP K G D +LW P + L GH ++C+ F+P +
Sbjct: 492 DINSVAVSPNDKLIA--TGSQDRLA-KLWSCPDCSLLGVFTGHKRGIWCVQFSPVDQILA 548
Query: 117 SDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNG 176
+ + + T+++W ++ CLK H V I F GT +++ DGL ++ T
Sbjct: 549 TSSADGTLKLWGLQDFSCLKTFEGHDASVLKIIFVSRGTQLLSGGSDGLLKLWTIKTNE- 607
Query: 177 KFILVGTLD-NTLRLWNYSTRK 197
V TLD + ++W T K
Sbjct: 608 ---CVKTLDGHEDKIWGLHTNK 626
Score = 146 (56.5 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 29/96 (30%), Positives = 51/96 (53%)
Query: 80 ATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRI--VSDTFNETIRIWDIKTGKCLKV 137
+TI++WD+ L G + V + F+P +R+ S + + IRIWD+ + KC+ V
Sbjct: 132 STIKIWDMIKQYCTHNLKGSSGVVHLVEFHPDISRLQLFSSSMDYKIRIWDLNSSKCVAV 191
Query: 138 LPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDAST 173
L H VT++ F DG +++S D + + + T
Sbjct: 192 LDGHFSAVTSLAFTADGNTLISSGRDKICMVWNLKT 227
Score = 124 (48.7 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 40/136 (29%), Positives = 68/136 (50%)
Query: 2 SSDR--SLESFRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSL---SSIS 56
S DR L S +L GH R + V+FS ++L +SSA+ TL + L S +
Sbjct: 509 SQDRLAKLWSCPDCSLLGVFTGHKRGIWCVQFSPVDQILATSSADGTLKLWGLQDFSCLK 568
Query: 57 NFDSTPPSPLQ-----KFTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQ 111
F+ S L+ + T G SD ++LW + T +KTL GH + ++ ++ N Q
Sbjct: 569 TFEGHDASVLKIIFVSRGTQLLSGGSD-GLLKLWTIKTNECVKTLDGHEDKIWGLHTNKQ 627
Query: 112 SNRIVSDTFNETIRIW 127
+ +V+ + + +I +W
Sbjct: 628 DDMVVTASSDSSITLW 643
Score = 101 (40.6 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 31/139 (22%), Positives = 68/139 (48%)
Query: 82 IRLWDVPTATSLKTLIGHTNYVFCINF-NPQSNRIVSDTFNETIRIWDIKTGKCLKVLPA 140
I +D T K L G+ + V + F P + IV T + ++++++ T C ++L
Sbjct: 326 IVFYDAQTLQLRKQLAGYNDEVLDVKFLGPGDSHIVVATNSPQLKVFELSTSHC-QILYG 384
Query: 141 HSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGT-LDNTLRLWNYSTRKIL 199
H++ + A+D R G M V+ + D R+ + +G+ + V L + + S ++
Sbjct: 385 HTETILALDVFRKGLMFVSCAKDKSIRVWRMNK-DGRVVCVAQGLGHAHGVGAVSCSRLK 443
Query: 200 KTYSGYTNSKYCISSTFSV 218
+++ T+S+ C +++
Sbjct: 444 ESFV-VTSSQDCTIKVWNI 461
Score = 69 (29.3 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 14/44 (31%), Positives = 25/44 (56%)
Query: 19 LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTP 62
L+GH AV+ + F+ DG L SS +K + ++L + + + P
Sbjct: 192 LDGHFSAVTSLAFTADGNTLISSGRDKICMVWNLKTRESIRTIP 235
Score = 59 (25.8 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 14/54 (25%), Positives = 25/54 (46%)
Query: 173 TPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVS 226
+P + + + D TL+LW LKT+ G+ S + V+ G ++S
Sbjct: 541 SPVDQILATSSADGTLKLWGLQDFSCLKTFEGHDAS---VLKIIFVSRGTQLLS 591
Score = 56 (24.8 bits), Expect = 7.2e-09, Sum P(2) = 7.2e-09
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 176 GKFILVGTLDNTLRLWNYSTRKILKTYSGY 205
G +L G D L+LW T + +KT G+
Sbjct: 586 GTQLLSGGSDGLLKLWTIKTNECVKTLDGH 615
>GENEDB_PFALCIPARUM|PF08_0019 [details] [associations]
symbol:PF08_0019 "receptor for activated C
kinase homolog, PfRACK" species:5833 "Plasmodium falciparum"
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] [GO:0005080 "protein kinase C binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 164 (62.8 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 65/266 (24%), Positives = 125/266 (46%)
Query: 21 GHLRAVSYVKFSHDGRLLT--SSSAEKTLLTYSLSSISNFDSTPPSPLQK-FTGHEQGIS 77
GH V+ V D +L T S+S +K L+ +++++ + DS +K TGH Q I+
Sbjct: 19 GHSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINT--DDDSGEIGTAKKSLTGHSQAIN 76
Query: 78 DLA---------------TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNE 122
D++ ++RLWD+ ++++ IGHT+ VF ++F+P + +IVS + ++
Sbjct: 77 DVSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDK 136
Query: 123 TIRIWDIKTGKCLKVLP--AHSDPVTAIDFNR--DGTMIVTSSYDGLYRILDASTPNGKF 178
TI++W+ +C + H+D +T + F+ + +IV+ +D L ++ + +
Sbjct: 137 TIKLWNT-LAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLNK 195
Query: 179 ILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHR--DPVISVAS 236
L G L S L G K ++ + V GK++ S + S+
Sbjct: 196 NLEGHT-GVLNTVTISPDGSLCASGG----KDGVAKLWDVKEGKHLYSLETGSTINSLCF 250
Query: 237 HPAKNIIASGALDNDRTMKIWTQEKE 262
P + + DR ++IW E +
Sbjct: 251 SPCDYWLCAAT---DRFIRIWNLESK 273
Score = 153 (58.9 bits), Expect = 8.4e-09, P = 8.4e-09
Identities = 47/188 (25%), Positives = 90/188 (47%)
Query: 14 TLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLS---SISNFDSTPPSPLQ-KF 69
T ++L GH +A++ V S DG S S + ++ + LS +I +F F
Sbjct: 63 TAKKSLTGHSQAINDVSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSF 122
Query: 70 TGHEQGISDLA---TIRLWDVPTATSLKTLIG---HTNYVFCINFNPQSNR--IVSDTFN 121
+ + I + TI+LW+ T K I HT+++ C+ F+P N+ IVS ++
Sbjct: 123 SPDNRQIVSASRDKTIKLWN--TLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWD 180
Query: 122 ETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFIL- 180
+ +++W++K K L H+ + + + DG++ + DG+ ++ D + L
Sbjct: 181 KLVKVWNLKNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSLE 240
Query: 181 VGTLDNTL 188
G+ N+L
Sbjct: 241 TGSTINSL 248
>UNIPROTKB|Q8IBA0 [details] [associations]
symbol:PfRACK "Receptor for activated C kinase homolog,
PfRACK" species:36329 "Plasmodium falciparum 3D7" [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 164 (62.8 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 65/266 (24%), Positives = 125/266 (46%)
Query: 21 GHLRAVSYVKFSHDGRLLT--SSSAEKTLLTYSLSSISNFDSTPPSPLQK-FTGHEQGIS 77
GH V+ V D +L T S+S +K L+ +++++ + DS +K TGH Q I+
Sbjct: 19 GHSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINT--DDDSGEIGTAKKSLTGHSQAIN 76
Query: 78 DLA---------------TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNE 122
D++ ++RLWD+ ++++ IGHT+ VF ++F+P + +IVS + ++
Sbjct: 77 DVSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDK 136
Query: 123 TIRIWDIKTGKCLKVLP--AHSDPVTAIDFNR--DGTMIVTSSYDGLYRILDASTPNGKF 178
TI++W+ +C + H+D +T + F+ + +IV+ +D L ++ + +
Sbjct: 137 TIKLWNT-LAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLNK 195
Query: 179 ILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHR--DPVISVAS 236
L G L S L G K ++ + V GK++ S + S+
Sbjct: 196 NLEGHT-GVLNTVTISPDGSLCASGG----KDGVAKLWDVKEGKHLYSLETGSTINSLCF 250
Query: 237 HPAKNIIASGALDNDRTMKIWTQEKE 262
P + + DR ++IW E +
Sbjct: 251 SPCDYWLCAAT---DRFIRIWNLESK 273
Score = 153 (58.9 bits), Expect = 8.4e-09, P = 8.4e-09
Identities = 47/188 (25%), Positives = 90/188 (47%)
Query: 14 TLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLS---SISNFDSTPPSPLQ-KF 69
T ++L GH +A++ V S DG S S + ++ + LS +I +F F
Sbjct: 63 TAKKSLTGHSQAINDVSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSF 122
Query: 70 TGHEQGISDLA---TIRLWDVPTATSLKTLIG---HTNYVFCINFNPQSNR--IVSDTFN 121
+ + I + TI+LW+ T K I HT+++ C+ F+P N+ IVS ++
Sbjct: 123 SPDNRQIVSASRDKTIKLWN--TLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWD 180
Query: 122 ETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFIL- 180
+ +++W++K K L H+ + + + DG++ + DG+ ++ D + L
Sbjct: 181 KLVKVWNLKNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSLE 240
Query: 181 VGTLDNTL 188
G+ N+L
Sbjct: 241 TGSTINSL 248
>SGD|S000006382 [details] [associations]
symbol:PRP4 "Splicing factor" species:4932 "Saccharomyces
cerevisiae" [GO:0003674 "molecular_function" evidence=ND]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=IDA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IPI] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 SGD:S000006382 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006949 GO:GO:0000398
InterPro:IPR027106 PANTHER:PTHR19846 EMBL:U25842 GO:GO:0046540
EMBL:M26597 HOGENOM:HOG000157615 KO:K12662
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:M28518 PIR:A32569
RefSeq:NP_015504.1 ProteinModelPortal:P20053 SMR:P20053
DIP:DIP-2607N IntAct:P20053 MINT:MINT-423902 STRING:P20053
PaxDb:P20053 EnsemblFungi:YPR178W GeneID:856307 KEGG:sce:YPR178W
CYGD:YPR178w OrthoDB:EOG4V1B90 NextBio:981676 Genevestigator:P20053
GermOnline:YPR178W Uniprot:P20053
Length = 465
Score = 167 (63.8 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 65/263 (24%), Positives = 107/263 (40%)
Query: 15 LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGHEQ 74
LTQ L+ H+ + + + D S AE L+ SN + L GHE+
Sbjct: 210 LTQKLDSHVGKIGAIDWHPDSNNQMISCAEDGLIKNF--QYSN-EEGGLRLLGDLVGHER 266
Query: 75 GISDLA---------------TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDT 119
ISD+ T RLWD T L GH VF ++F + + S
Sbjct: 267 RISDVKYHPSGKFIGSASHDMTWRLWDASTHQELLLQEGHDKGVFSLSFQCDGSLVCSGG 326
Query: 120 FNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDA-STPNGKF 178
+ +WDI++G + L HS P+ + ++ +G + T DG+ + D G+
Sbjct: 327 MDSLSMLWDIRSGSKVMTLAGHSKPIYTVAWSPNGYQVATGGGDGIINVWDIRKRDEGQL 386
Query: 179 ILVGTLDNTLRLWNYST----RKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISV 234
+ N + +S +K++ GY N SS + G + H D +IS+
Sbjct: 387 NQILAHRNIVTQVRFSKEDGGKKLVSC--GYDNLINVYSSDTWLKMGS-LAGHTDKIISL 443
Query: 235 ASHPAKNIIASGALDNDRTMKIW 257
+ + SG D R++K+W
Sbjct: 444 DISNNSHFLVSGGWD--RSIKLW 464
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 169 (64.5 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 57/227 (25%), Positives = 101/227 (44%)
Query: 41 SSAEKTLLTYSLSSISNFDSTPPS-PLQKFTGHEQGIS-DLATIRLWDVPTATSLKTLIG 98
++A T + L I S S L K TG D + +W V + +L G
Sbjct: 2 AAAVVTKTAWKLQEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTG 61
Query: 99 HTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIV 158
HT + + + + IV+ + + +IR+WD++ K L+ L H + ++DF+ G+ +
Sbjct: 62 HTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVA 121
Query: 159 TSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYSTR-KILKTYSGYTNSKYCISSTFS 217
+ S D ++ D G + +R +S K L + + K +
Sbjct: 122 SGSLDTDIKLWDVRR-KGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKL-----WD 175
Query: 218 VTNGKYI---VSHRDPVISVASHPAKNIIASGALDNDRTMKIWTQEK 261
+T GK + H PV V HP++ ++ASG+ +DRT++ W EK
Sbjct: 176 LTAGKVMFEFTGHSGPVNVVEFHPSEYLLASGS--SDRTIRFWDLEK 220
Score = 153 (58.9 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 41/174 (23%), Positives = 82/174 (47%)
Query: 17 QTLNGHLRAVSYVKFSHD-GRLLTSSSAEKTLLTYSLSS----ISNFDSTPPSPLQKFTG 71
Q + H VS + GRLL + + + +S++ +S T P + +
Sbjct: 14 QEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISA 73
Query: 72 HEQGI---SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWD 128
E+ I S +IR+WD+ A L+TL+GH + ++F+P + + S + + I++WD
Sbjct: 74 KEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWD 133
Query: 129 IKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVG 182
++ C+ +H+ V + F+ DG + +++ D ++ D + F G
Sbjct: 134 VRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTG 187
Score = 140 (54.3 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 39/163 (23%), Positives = 67/163 (41%)
Query: 18 TLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSI----------SNFDSTPPSPLQ 67
+L GH + ++ S L+ + S ++ + L + +N S P
Sbjct: 58 SLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYG 117
Query: 68 KFTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIW 127
F G D I+LWDV + HT V C+ F+P + S + T+++W
Sbjct: 118 SFVA--SGSLD-TDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLW 174
Query: 128 DIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
D+ GK + HS PV ++F+ ++ + S D R D
Sbjct: 175 DLTAGKVMFEFTGHSGPVNVVEFHPSEYLLASGSSDRTIRFWD 217
Score = 128 (50.1 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 37/158 (23%), Positives = 68/158 (43%)
Query: 15 LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSL---SSISNFDS-TPPSPLQKFT 70
+ +TL GH + + F G + S S + + + + I + S T +F+
Sbjct: 97 ILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFS 156
Query: 71 GHEQGISDLA---TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIW 127
+ ++ A T++LWD+ + GH+ V + F+P + S + + TIR W
Sbjct: 157 PDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHPSEYLLASGSSDRTIRFW 216
Query: 128 DIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGL 165
D++ + + + PV I FN DG + D L
Sbjct: 217 DLEKFHVVSCIEEEATPVRCILFNPDGCCLYGGFQDSL 254
>UNIPROTKB|D6RFX4 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9606 "Homo sapiens" [GO:0008200 "ion channel
inhibitor activity" evidence=IEA] [GO:0015935 "small ribosomal
subunit" evidence=IEA] [GO:0017148 "negative regulation of
translation" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0090003
"regulation of establishment of protein localization to plasma
membrane" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0017148 GO:GO:0043025 GO:GO:0030425
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008200
HOGENOM:HOG000091643 ChiTaRS:GNB2L1 HGNC:HGNC:4399 GO:GO:0015935
EMBL:AC008443 IPI:IPI00966041 ProteinModelPortal:D6RFX4 SMR:D6RFX4
Ensembl:ENST00000507000 UCSC:uc010jls.3 ArrayExpress:D6RFX4
Bgee:D6RFX4 Uniprot:D6RFX4
Length = 194
Score = 137 (53.3 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 29/92 (31%), Positives = 54/92 (58%)
Query: 81 TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLP- 139
T+RLWD+ T T+ + +GHT V + F+ + +IVS + ++TI++W+ G C +
Sbjct: 45 TLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNT-LGVCKYTVQD 103
Query: 140 -AHSDPVTAIDF--NRDGTMIVTSSYDGLYRI 168
+HS+ V+ + F N +IV+ +D L ++
Sbjct: 104 ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKV 135
Score = 99 (39.9 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 19/70 (27%), Positives = 38/70 (54%)
Query: 94 KTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRD 153
+ L GH+++V + + +S +++ T+R+WD+ TG + H+ V ++ F+ D
Sbjct: 16 RALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSD 75
Query: 154 GTMIVTSSYD 163
IV+ S D
Sbjct: 76 NRQIVSGSRD 85
Score = 43 (20.2 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 10/32 (31%), Positives = 14/32 (43%)
Query: 173 TPNGKFILVGTLDNTLRLWNYSTRKILKTYSG 204
+P+G G D LW+ + K L T G
Sbjct: 160 SPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG 191
Score = 40 (19.1 bits), Expect = 8.2e-10, Sum P(2) = 8.2e-10
Identities = 6/22 (27%), Positives = 13/22 (59%)
Query: 185 DNTLRLWNYSTRKILKTYSGYT 206
D +++WN + K+ + G+T
Sbjct: 130 DKLVKVWNLANCKLKTNHIGHT 151
>SGD|S000004722 [details] [associations]
symbol:ASC1 "G-protein beta subunit and guanine nucleotide
dissociation inhibitor" species:4932 "Saccharomyces cerevisiae"
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0004871 "signal
transducer activity" evidence=IMP;IPI] [GO:0001403 "invasive growth
in response to glucose limitation" evidence=IMP] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IDA] [GO:0017148
"negative regulation of translation" evidence=IMP] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IMP;IPI]
[GO:0001965 "G-protein alpha-subunit binding" evidence=IPI]
[GO:0005092 "GDP-dissociation inhibitor activity" evidence=IDA]
[GO:0010255 "glucose mediated signaling pathway" evidence=IMP;IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000004722 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0017148 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 EMBL:BK006946 GO:GO:0004871
GO:GO:0001403 EMBL:Z49702 GO:GO:0022627 GO:GO:0010255
HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 GO:GO:0005092 OrthoDB:EOG437VPP
PIR:S54578 RefSeq:NP_013834.1 PDB:1TRJ PDB:3FRX PDB:3IZB PDB:3O2Z
PDB:3O30 PDB:3RFG PDB:3RFH PDB:3U5C PDB:3U5G PDBsum:1TRJ
PDBsum:3FRX PDBsum:3IZB PDBsum:3O2Z PDBsum:3O30 PDBsum:3RFG
PDBsum:3RFH PDBsum:3U5C PDBsum:3U5G ProteinModelPortal:P38011
SMR:P38011 DIP:DIP-6465N IntAct:P38011 MINT:MINT-652105
STRING:P38011 UCD-2DPAGE:P38011 PaxDb:P38011 PeptideAtlas:P38011
EnsemblFungi:YMR116C GeneID:855143 KEGG:sce:YMR116C
EvolutionaryTrace:P38011 NextBio:978537 Genevestigator:P38011
GermOnline:YMR116C Uniprot:P38011
Length = 319
Score = 160 (61.4 bits), Expect = 4.6e-10, Sum P(2) = 4.6e-10
Identities = 45/150 (30%), Positives = 77/150 (51%)
Query: 15 LTQTLNGHLRAVSYVKFSH-DGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGHE 73
L TL GH V+ + S LL S+S +KTL+++ L+ D P++ F GH
Sbjct: 9 LRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGD---DQKFGVPVRSFKGHS 65
Query: 74 QGISDLA---------------TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSD 118
+ D T+RLWDV T + + +GH + V ++ + +++ I+S
Sbjct: 66 HIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISG 125
Query: 119 TFNETIRIWDIKTGKCLKVLPAHSDPVTAI 148
+ ++TI++W IK G+CL L H+D V+ +
Sbjct: 126 SRDKTIKVWTIK-GQCLATLLGHNDWVSQV 154
Score = 36 (17.7 bits), Expect = 4.6e-10, Sum P(2) = 4.6e-10
Identities = 7/33 (21%), Positives = 16/33 (48%)
Query: 225 VSHRDPVISVASHPAKNIIASGALDNDRTMKIW 257
+ H + ++ + P +IAS D + + +W
Sbjct: 193 IGHNSNINTLTASPDGTLIASAGKDGE--IMLW 223
>FB|FBgn0021874 [details] [associations]
symbol:Nle "Notchless" species:7227 "Drosophila melanogaster"
[GO:0007219 "Notch signaling pathway" evidence=ISS;TAS] [GO:0005112
"Notch binding" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005634 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0005112 GeneTree:ENSGT00690000102167 InterPro:IPR011047
SUPFAM:SSF50998 HSSP:P16649 PRINTS:PR00319 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 FlyBase:FBgn0021874 EMBL:AY089286
RefSeq:NP_477294.2 UniGene:Dm.13475 SMR:Q9VPR4 IntAct:Q9VPR4
MINT:MINT-291987 STRING:Q9VPR4 EnsemblMetazoa:FBtr0078075
GeneID:33234 KEGG:dme:Dmel_CG2863 UCSC:CG2863-RA CTD:33234
InParanoid:Q9VPR4 GenomeRNAi:33234 NextBio:782583 Uniprot:Q9VPR4
Length = 488
Score = 155 (59.6 bits), Expect = 4.8e-10, Sum P(2) = 4.8e-10
Identities = 49/167 (29%), Positives = 80/167 (47%)
Query: 11 RPYT-LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSIS-NFDSTPPSPLQK 68
RP T T ++ GH AV + FS DG L S S + T+ + L++ + +F T
Sbjct: 106 RPVTRCTSSMPGHAEAVVSLNFSPDGAHLASGSGDTTVRLWDLNTETPHFTCTGHKQWVL 165
Query: 69 FTGHEQGISDLAT------IRLWDVPTATSL-KTLIGHTNYVFCINF-----NPQSNRIV 116
LA+ I +WD T + L GH ++ C+ + +P+ ++
Sbjct: 166 CVSWAPDGKRLASGCKAGSIIIWDPETGQQKGRPLSGHKKHINCLAWEPYHRDPECRKLA 225
Query: 117 SDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYD 163
S + + RIWD+K G+CL + H++ VTA+ + G +I TSS D
Sbjct: 226 SASGDGDCRIWDVKLGQCLMNIAGHTNAVTAVRWGGAG-LIYTSSKD 271
Score = 139 (54.0 bits), Expect = 9.0e-07, P = 9.0e-07
Identities = 24/88 (27%), Positives = 48/88 (54%)
Query: 81 TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPA 140
++RLW + T GH V+ + ++ S IVS + + T+++W ++T K + LP
Sbjct: 398 SVRLWRASDGQYMATFRGHVQAVYTVAWSADSRLIVSGSKDSTLKVWSVQTKKLAQELPG 457
Query: 141 HSDPVTAIDFNRDGTMIVTSSYDGLYRI 168
H+D V +D+ DG+ + + D + ++
Sbjct: 458 HADEVFGVDWAPDGSRVASGGKDKVIKL 485
Score = 138 (53.6 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 43/184 (23%), Positives = 81/184 (44%)
Query: 2 SSDRSLESFRPYT--LTQTLNGHLRAVSYVKFSHDGRLLTS--------SSAEKTLLTYS 51
S DR+++ +R L +T +GH V+ + S D L T S + +L T
Sbjct: 269 SKDRTVKMWRAADGILCRTFSGHAHWVNNIALSTDYVLRTGPFHPVKDRSKSHLSLSTEE 328
Query: 52 L--SSISNFDSTPPSPLQKFTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFN 109
L S++ + + P ++ SD T+ LW ++ + GH N V + ++
Sbjct: 329 LQESALKRYQAVCPDEVESLVS----CSDDNTLYLWRNNQNKCVERMTGHQNVVNDVKYS 384
Query: 110 PQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRIL 169
P I S +F++++R+W G+ + H V + ++ D +IV+ S D ++
Sbjct: 385 PDVKLIASASFDKSVRLWRASDGQYMATFRGHVQAVYTVAWSADSRLIVSGSKDSTLKVW 444
Query: 170 DAST 173
T
Sbjct: 445 SVQT 448
Score = 121 (47.7 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 33/102 (32%), Positives = 51/102 (50%)
Query: 75 GISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKC 134
G D T+RLWD+ T T T GH +V C+++ P R+ S +I IWD +TG+
Sbjct: 137 GSGD-TTVRLWDLNTETPHFTCTGHKQWVLCVSWAPDGKRLASGCKAGSIIIWDPETGQQ 195
Query: 135 L-KVLPAHSDPVTAI---DFNRDGTM--IVTSSYDGLYRILD 170
+ L H + + ++RD + ++S DG RI D
Sbjct: 196 KGRPLSGHKKHINCLAWEPYHRDPECRKLASASGDGDCRIWD 237
Score = 50 (22.7 bits), Expect = 4.8e-10, Sum P(2) = 4.8e-10
Identities = 9/47 (19%), Positives = 25/47 (53%)
Query: 179 ILVGTLDNTLRLWNYSTRKILKTYSGYTN--SKYCISSTFSVTNGKY 223
I + D T+++W + + +T+SG+ + + +S+ + + G +
Sbjct: 265 IYTSSKDRTVKMWRAADGILCRTFSGHAHWVNNIALSTDYVLRTGPF 311
Score = 43 (20.2 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 174 PNGKFILVGTLDNTLRLWNY 193
P+G + G D ++LW Y
Sbjct: 469 PDGSRVASGGKDKVIKLWAY 488
Score = 38 (18.4 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 224 IVSHRDPVISVASHPAKNIIASGALDNDRTMKIW 257
I H + V +V A I S DRT+K+W
Sbjct: 247 IAGHTNAVTAVRWGGAGLIYTSS---KDRTVKMW 277
>TAIR|locus:2012971 [details] [associations]
symbol:AT1G71840 "AT1G71840" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0005829 "cytosol" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684 GO:GO:0005829
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 HOGENOM:HOG000261676 OMA:VWSFEVG HSSP:P16649
EMBL:AY080732 EMBL:BT001964 IPI:IPI00538190 RefSeq:NP_177329.2
UniGene:At.44000 ProteinModelPortal:Q8RXQ4 SMR:Q8RXQ4 IntAct:Q8RXQ4
PRIDE:Q8RXQ4 EnsemblPlants:AT1G71840.1 GeneID:843514
KEGG:ath:AT1G71840 TAIR:At1g71840 InParanoid:Q8RXQ4
PhylomeDB:Q8RXQ4 ProtClustDB:CLSN2680639 ArrayExpress:Q8RXQ4
Genevestigator:Q8RXQ4 Uniprot:Q8RXQ4
Length = 407
Score = 165 (63.1 bits), Expect = 5.0e-10, P = 5.0e-10
Identities = 60/252 (23%), Positives = 115/252 (45%)
Query: 19 LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS--ISNFDSTPPSPLQKFTGHEQGI 76
L GH +VS + FS+DG+LL S + + + SS + P + ++ H +G
Sbjct: 109 LPGHKDSVSCLAFSYDGQLLASGGLDGVVQIFDASSGTLKCVLDGPGAGIEWVRWHPRGH 168
Query: 77 SDLA-----TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKT 131
LA ++ +W+ L GH V C +F P I + + + ++ +W+ KT
Sbjct: 169 IVLAGSEDCSLWMWNADKEAYLNMFSGHNLNVTCGDFTPDGKLICTGSDDASLIVWNPKT 228
Query: 132 GKCLKVL---PAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFI--LVGTLDN 186
+ + ++ P H++ +T +D N + ++ ++ S DG I++ T GK + L D+
Sbjct: 229 CESIHIVKGHPYHTEGLTCLDINSNSSLAISGSKDGSVHIVNIVT--GKVVSSLNSHTDS 286
Query: 187 TLRL-WNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIAS 245
+ ++ S+ I +G + K I T ++I H + V S+ +A+
Sbjct: 287 VECVKFSPSSATIPLAATGGMDKKLIIWDLQHSTP-RFICEHEEGVTSLTWIGTSKYLAT 345
Query: 246 GALDNDRTMKIW 257
G + T+ IW
Sbjct: 346 GCANG--TVSIW 355
Score = 124 (48.7 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 57/250 (22%), Positives = 106/250 (42%)
Query: 14 TLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQ----KF 69
TL L+G + +V++ G ++ + S + +L ++ + + L F
Sbjct: 146 TLKCVLDGPGAGIEWVRWHPRGHIVLAGSEDCSLWMWNADKEAYLNMFSGHNLNVTCGDF 205
Query: 70 TGHEQGI---SDLATIRLWDVPTATSLKTLIGH---TNYVFCINFNPQSNRIVSDTFNET 123
T + I SD A++ +W+ T S+ + GH T + C++ N S+ +S + + +
Sbjct: 206 TPDGKLICTGSDDASLIVWNPKTCESIHIVKGHPYHTEGLTCLDINSNSSLAISGSKDGS 265
Query: 124 IRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYR---ILDASTPNGKFIL 180
+ I +I TGK + L +H+D V + F+ I ++ G+ + I D +FI
Sbjct: 266 VHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIPLAATGGMDKKLIIWDLQHSTPRFIC 325
Query: 181 VGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAK 240
T W T K L T G N I + H+D V +++
Sbjct: 326 EHEEGVTSLTW-IGTSKYLAT--GCANGTVSIWDSLLGNCVHTYHGHQDAVQAISVSTNT 382
Query: 241 NIIASGALDN 250
+ I S ++DN
Sbjct: 383 DFIVSVSVDN 392
Score = 116 (45.9 bits), Expect = 0.00029, P = 0.00029
Identities = 26/92 (28%), Positives = 46/92 (50%)
Query: 92 SLKTLIGHTNYVFCINFNPQSNRIVSDTF-NETIRIWDIKTGKCLKVLPAHSDPVTAIDF 150
S+ T GH ++ + +P +V+ ++ +W I G LP H D V+ + F
Sbjct: 62 SVHTFTGHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAF 121
Query: 151 NRDGTMIVTSSYDGLYRILDASTPNGKFILVG 182
+ DG ++ + DG+ +I DAS+ K +L G
Sbjct: 122 SYDGQLLASGGLDGVVQIFDASSGTLKCVLDG 153
>SGD|S000004212 [details] [associations]
symbol:UTP13 "Nucleolar protein" species:4932 "Saccharomyces
cerevisiae" [GO:0005634 "nucleus" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0030686 "90S preribosome"
evidence=IDA] [GO:0030515 "snoRNA binding" evidence=IPI]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0034388
"Pwp2p-containing subcomplex of 90S preribosome" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0032040 "small-subunit processome"
evidence=IEA;IDA] [GO:0000480 "endonucleolytic cleavage in 5'-ETS
of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000472 "endonucleolytic cleavage to generate mature 5'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000004212 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030515
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006945
EMBL:U19027 GO:GO:0032040 GO:GO:0000447 GO:GO:0000472 GO:GO:0000480
GO:GO:0034388 HOGENOM:HOG000188765 KO:K14555
GeneTree:ENSGT00690000102183 OrthoDB:EOG4DZ53K PIR:S51445
RefSeq:NP_013323.1 ProteinModelPortal:Q05946 SMR:Q05946
DIP:DIP-4790N IntAct:Q05946 MINT:MINT-501291 STRING:Q05946
PaxDb:Q05946 PeptideAtlas:Q05946 EnsemblFungi:YLR222C GeneID:850919
KEGG:sce:YLR222C CYGD:YLR222c OMA:ADSKLIR NextBio:967338
Genevestigator:Q05946 GermOnline:YLR222C Uniprot:Q05946
Length = 817
Score = 169 (64.5 bits), Expect = 5.1e-10, P = 5.1e-10
Identities = 40/158 (25%), Positives = 87/158 (55%)
Query: 18 TLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQ-----KFTGH 72
T + H + ++ + S + + ++S +KT ++L + ++T + + F +
Sbjct: 486 TRHAHEKDINALSVSPNDSIFATASYDKTCKIWNLEN-GELEATLANHKRGLWDVSFCQY 544
Query: 73 EQGISDLA---TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDI 129
++ ++ + T+++W + T + +KTL GHTN V +F + +++S + I+IWD
Sbjct: 545 DKLLATSSGDKTVKIWSLDTFSVMKTLEGHTNAVQRCSFINKQKQLISCGADGLIKIWDC 604
Query: 130 KTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYR 167
+G+CLK L H++ + A+ DG MIV++ DG+++
Sbjct: 605 SSGECLKTLDGHNNRLWALSTMNDGDMIVSADADGVFQ 642
Score = 122 (48.0 bits), Expect = 0.00016, P = 0.00016
Identities = 30/116 (25%), Positives = 57/116 (49%)
Query: 81 TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPA 140
T ++W++ TL H ++ ++F + + + ++T++IW + T +K L
Sbjct: 514 TCKIWNLENGELEATLANHKRGLWDVSFCQYDKLLATSSGDKTVKIWSLDTFSVMKTLEG 573
Query: 141 HSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLD-NTLRLWNYST 195
H++ V F +++ DGL +I D S+ G+ + TLD + RLW ST
Sbjct: 574 HTNAVQRCSFINKQKQLISCGADGLIKIWDCSS--GECLK--TLDGHNNRLWALST 625
>UNIPROTKB|E1BV27 [details] [associations]
symbol:TBL1X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0003682 GO:GO:0005667
GO:GO:0044212 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045444 GeneTree:ENSGT00690000102024 KO:K04508 CTD:6907
OMA:RAHSVNN EMBL:AADN02017315 EMBL:AADN02017316 EMBL:AADN02017317
EMBL:AADN02017318 EMBL:AADN02017319 EMBL:AADN02017320
EMBL:AADN02017321 EMBL:AADN02017322 EMBL:AADN02017323
EMBL:AADN02017324 IPI:IPI00589153 RefSeq:NP_001153226.1
UniGene:Gga.5909 ProteinModelPortal:E1BV27
Ensembl:ENSGALT00000021808 GeneID:426045 KEGG:gga:426045
NextBio:20827776 Uniprot:E1BV27
Length = 523
Score = 149 (57.5 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 32/112 (28%), Positives = 58/112 (51%)
Query: 77 SDLATIRLWDVPTATSLKTLIGHTNYVFCINF--------NPQSN-RIVSDTFNETIRIW 127
SD T+++W + T + L H+ ++ I + NP SN + S +F+ T+R+W
Sbjct: 377 SDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSPTGPGTSNPNSNIMLASASFDSTVRLW 436
Query: 128 DIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFI 179
D+ G C+ L H +PV ++ F+ DG + + S+D I + T +G +
Sbjct: 437 DVDRGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWN--TQSGTLV 486
Score = 145 (56.1 bits), Expect = 5.2e-10, Sum P(2) = 5.2e-10
Identities = 54/220 (24%), Positives = 94/220 (42%)
Query: 15 LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISN-----FDSTPPSPL--Q 67
L TL H + +K++ G + S+ +KT + + + F S P + Q
Sbjct: 267 LASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ 326
Query: 68 KFTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIW 127
T +D+ I + + +KT GHTN V I ++P + S + + T++IW
Sbjct: 327 NNTTFASCSTDMC-IHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIW 385
Query: 128 DIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVG-TLDN 186
+K C+ L AHS + I ++ G S PN +L + D+
Sbjct: 386 SMKQDTCVHDLQAHSKEIYTIKWSPTGP--------------GTSNPNSNIMLASASFDS 431
Query: 187 TLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVS 226
T+RLW+ + T + + Y ++ FS +GKY+ S
Sbjct: 432 TVRLWDVDRGVCIHTLTKHQEPVYSVA--FS-PDGKYLAS 468
Score = 121 (47.7 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 33/99 (33%), Positives = 55/99 (55%)
Query: 86 DVPTATSLKTLI-GHTNYVFCINFNPQSNRIVSDTFNETIRIWDIK----TGK------- 133
DV + T++ GH + VF +NP S+ + S + + T RIW++ +G
Sbjct: 163 DVEIPPNKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNSGSTQLVLRH 222
Query: 134 CLKV----LPAHSDPVTAIDFNRDGTMIVTSSYDGLYRI 168
C++ +P++ D VT++D+N DGT++ T SYDG RI
Sbjct: 223 CIREGGHDVPSNKD-VTSLDWNSDGTLLATGSYDGFARI 260
Score = 63 (27.2 bits), Expect = 5.2e-10, Sum P(2) = 5.2e-10
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 224 IVSHRDPVISVASHPAKNIIASGALDNDRTMKIW-TQ 259
+ H++PV SVA P +ASG+ D + + IW TQ
Sbjct: 447 LTKHQEPVYSVAFSPDGKYLASGSFD--KCVHIWNTQ 481
Score = 48 (22.0 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 15/50 (30%), Positives = 21/50 (42%)
Query: 12 PYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDST 61
P L GH V ++ LL S S + T ++L+ SN ST
Sbjct: 167 PPNKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNSGST 216
>UNIPROTKB|P63247 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9031 "Gallus gallus" [GO:0007165 "signal
transduction" evidence=TAS] [GO:0001891 "phagocytic cup"
evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=IEA] [GO:0019903 "protein
phosphatase binding" evidence=IEA] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0043547 "positive regulation
of GTPase activity" evidence=IEA] [GO:0048471 "perinuclear region
of cytoplasm" evidence=IEA] [GO:0050765 "negative regulation of
phagocytosis" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:2001244 "positive regulation
of intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0007165 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547
GO:GO:0043025 GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0008200 GO:GO:0030178
GO:GO:2001244 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753
CTD:10399 HOVERGEN:HBG000277 OrthoDB:EOG4933J5 EMBL:M24193
EMBL:AY393848 EMBL:AY694127 EMBL:AB268588 IPI:IPI00596315
PIR:A33928 RefSeq:NP_001004378.1 UniGene:Gga.7066
ProteinModelPortal:P63247 SMR:P63247 STRING:P63247 PRIDE:P63247
GeneID:417044 KEGG:gga:417044 InParanoid:A5HUK6 NextBio:20820423
Uniprot:P63247
Length = 317
Score = 154 (59.3 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 47/175 (26%), Positives = 86/175 (49%)
Query: 14 TLTQTLNGHLRAVSYVKFSHD-GRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGH 72
TL TL GH V+ + + ++ S+S +KT++ + L+ P L+ GH
Sbjct: 6 TLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALR---GH 62
Query: 73 EQGISDLA---------------TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVS 117
+SD+ T+RLWD+ T T+ + +GHT V + F+ + +IVS
Sbjct: 63 SHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVS 122
Query: 118 DTFNETIRIWDIKTGKCLKVLP--AHSDPVTAIDF--NRDGTMIVTSSYDGLYRI 168
+ ++TI++W+ G C + +HS+ V+ + F N +IV+ +D L ++
Sbjct: 123 GSRDKTIKLWNT-LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKV 176
Score = 120 (47.3 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 49/186 (26%), Positives = 83/186 (44%)
Query: 13 YTLTQ-TLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS---ISNFDSTPPSPLQ- 67
Y + Q L GH VS V S DG+ S S + TL + L++ F L
Sbjct: 52 YGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSV 111
Query: 68 KFTGHEQGI---SDLATIRLWDVPTATSLKTLI---GHTNYVFCINFNPQSNR--IVSDT 119
F+ + I S TI+LW+ T K + H+ +V C+ F+P S+ IVS
Sbjct: 112 AFSSDNRQIVSGSRDKTIKLWN--TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCG 169
Query: 120 FNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFI 179
+++ +++W++ K H+ + + + DG++ + DG + D + GK +
Sbjct: 170 WDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLN--EGKHL 227
Query: 180 LVGTLD 185
TLD
Sbjct: 228 Y--TLD 231
Score = 43 (20.2 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 10/32 (31%), Positives = 14/32 (43%)
Query: 173 TPNGKFILVGTLDNTLRLWNYSTRKILKTYSG 204
+P+G G D LW+ + K L T G
Sbjct: 201 SPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG 232
Score = 40 (19.1 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 6/22 (27%), Positives = 13/22 (59%)
Query: 185 DNTLRLWNYSTRKILKTYSGYT 206
D +++WN + K+ + G+T
Sbjct: 171 DKLVKVWNLANCKLKTNHIGHT 192
>UNIPROTKB|P63243 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9913 "Bos taurus" [GO:0030971 "receptor
tyrosine kinase binding" evidence=ISS] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=ISS] [GO:0050765
"negative regulation of phagocytosis" evidence=ISS] [GO:0043547
"positive regulation of GTPase activity" evidence=ISS] [GO:0043065
"positive regulation of apoptotic process" evidence=ISS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0001891 "phagocytic cup" evidence=ISS] [GO:0042169 "SH2 domain
binding" evidence=ISS] [GO:0005080 "protein kinase C binding"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0032464 "positive regulation of protein homooligomerization"
evidence=ISS] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0030335 "positive regulation of cell migration" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=ISS] [GO:2000543 "positive regulation of gastrulation"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0043025 "neuronal cell body" evidence=ISS]
[GO:0043204 "perikaryon" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:0019903 "protein phosphatase
binding" evidence=IEA] [GO:0008656 "cysteine-type endopeptidase
activator activity involved in apoptotic process" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AJ132860 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0006417 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
GO:GO:0043547 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032880
GO:GO:0048511 GO:GO:0007049 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0042169 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:0030971 GO:GO:0030178 GO:GO:2001244 GO:GO:0007369
GO:GO:0032464 GO:GO:2000114 GO:GO:0051302 GO:GO:2000543
GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
EMBL:BC102286 IPI:IPI00700792 RefSeq:NP_786996.1 UniGene:Bt.2981
ProteinModelPortal:P63243 SMR:P63243 STRING:P63243 PRIDE:P63243
Ensembl:ENSBTAT00000026183 GeneID:327682 KEGG:bta:327682 CTD:10399
GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277 InParanoid:P63243
OrthoDB:EOG4933J5 NextBio:20810147 ArrayExpress:P63243
Uniprot:P63243
Length = 317
Score = 154 (59.3 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 47/175 (26%), Positives = 86/175 (49%)
Query: 14 TLTQTLNGHLRAVSYVKFSHD-GRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGH 72
TL TL GH V+ + + ++ S+S +KT++ + L+ P L+ GH
Sbjct: 6 TLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALR---GH 62
Query: 73 EQGISDLA---------------TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVS 117
+SD+ T+RLWD+ T T+ + +GHT V + F+ + +IVS
Sbjct: 63 SHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVS 122
Query: 118 DTFNETIRIWDIKTGKCLKVLP--AHSDPVTAIDF--NRDGTMIVTSSYDGLYRI 168
+ ++TI++W+ G C + +HS+ V+ + F N +IV+ +D L ++
Sbjct: 123 GSRDKTIKLWNT-LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKV 176
Score = 120 (47.3 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 49/186 (26%), Positives = 83/186 (44%)
Query: 13 YTLTQ-TLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS---ISNFDSTPPSPLQ- 67
Y + Q L GH VS V S DG+ S S + TL + L++ F L
Sbjct: 52 YGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSV 111
Query: 68 KFTGHEQGI---SDLATIRLWDVPTATSLKTLI---GHTNYVFCINFNPQSNR--IVSDT 119
F+ + I S TI+LW+ T K + H+ +V C+ F+P S+ IVS
Sbjct: 112 AFSSDNRQIVSGSRDKTIKLWN--TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCG 169
Query: 120 FNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFI 179
+++ +++W++ K H+ + + + DG++ + DG + D + GK +
Sbjct: 170 WDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLN--EGKHL 227
Query: 180 LVGTLD 185
TLD
Sbjct: 228 Y--TLD 231
Score = 43 (20.2 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 10/32 (31%), Positives = 14/32 (43%)
Query: 173 TPNGKFILVGTLDNTLRLWNYSTRKILKTYSG 204
+P+G G D LW+ + K L T G
Sbjct: 201 SPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG 232
Score = 40 (19.1 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 6/22 (27%), Positives = 13/22 (59%)
Query: 185 DNTLRLWNYSTRKILKTYSGYT 206
D +++WN + K+ + G+T
Sbjct: 171 DKLVKVWNLANCKLKTNHIGHT 192
>UNIPROTKB|F1PLR0 [details] [associations]
symbol:GNB2L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001244 "positive regulation of intrinsic
apoptotic signaling pathway" evidence=IEA] [GO:0051898 "negative
regulation of protein kinase B signaling cascade" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0050765
"negative regulation of phagocytosis" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0043547
"positive regulation of GTPase activity" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0032464 "positive regulation of
protein homooligomerization" evidence=IEA] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030971 "receptor tyrosine kinase
binding" evidence=IEA] [GO:0030496 "midbody" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=IEA] [GO:0019903
"protein phosphatase binding" evidence=IEA] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IEA] [GO:0008200 "ion channel inhibitor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=IEA] [GO:0001891 "phagocytic cup" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0048471 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547
GO:GO:0043025 GO:GO:0030425 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0043065 GO:GO:0051726 GO:GO:0001891 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 GO:GO:2001244 GO:GO:0032464 GO:GO:0030292 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 EMBL:AAEX03007665
ProteinModelPortal:F1PLR0 Ensembl:ENSCAFT00000020233 Uniprot:F1PLR0
Length = 317
Score = 154 (59.3 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 47/175 (26%), Positives = 86/175 (49%)
Query: 14 TLTQTLNGHLRAVSYVKFSHD-GRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGH 72
TL TL GH V+ + + ++ S+S +KT++ + L+ P L+ GH
Sbjct: 6 TLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALR---GH 62
Query: 73 EQGISDLA---------------TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVS 117
+SD+ T+RLWD+ T T+ + +GHT V + F+ + +IVS
Sbjct: 63 SHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVS 122
Query: 118 DTFNETIRIWDIKTGKCLKVLP--AHSDPVTAIDF--NRDGTMIVTSSYDGLYRI 168
+ ++TI++W+ G C + +HS+ V+ + F N +IV+ +D L ++
Sbjct: 123 GSRDKTIKLWNT-LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKV 176
Score = 120 (47.3 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 49/186 (26%), Positives = 83/186 (44%)
Query: 13 YTLTQ-TLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS---ISNFDSTPPSPLQ- 67
Y + Q L GH VS V S DG+ S S + TL + L++ F L
Sbjct: 52 YGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSV 111
Query: 68 KFTGHEQGI---SDLATIRLWDVPTATSLKTLI---GHTNYVFCINFNPQSNR--IVSDT 119
F+ + I S TI+LW+ T K + H+ +V C+ F+P S+ IVS
Sbjct: 112 AFSSDNRQIVSGSRDKTIKLWN--TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCG 169
Query: 120 FNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFI 179
+++ +++W++ K H+ + + + DG++ + DG + D + GK +
Sbjct: 170 WDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLN--EGKHL 227
Query: 180 LVGTLD 185
TLD
Sbjct: 228 Y--TLD 231
Score = 43 (20.2 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 10/32 (31%), Positives = 14/32 (43%)
Query: 173 TPNGKFILVGTLDNTLRLWNYSTRKILKTYSG 204
+P+G G D LW+ + K L T G
Sbjct: 201 SPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG 232
Score = 40 (19.1 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 6/22 (27%), Positives = 13/22 (59%)
Query: 185 DNTLRLWNYSTRKILKTYSGYT 206
D +++WN + K+ + G+T
Sbjct: 171 DKLVKVWNLANCKLKTNHIGHT 192
>UNIPROTKB|P63244 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9606 "Homo sapiens" [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007369 "gastrulation" evidence=IEA] [GO:0019048
"virus-host interaction" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0090003 "regulation of establishment of
protein localization to plasma membrane" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0043204 "perikaryon" evidence=IEA]
[GO:0005102 "receptor binding" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0019903 "protein phosphatase binding"
evidence=IPI] [GO:0030496 "midbody" evidence=IDA] [GO:0043025
"neuronal cell body" evidence=ISS] [GO:0042169 "SH2 domain binding"
evidence=IDA] [GO:0030971 "receptor tyrosine kinase binding"
evidence=IDA] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=IDA] [GO:0030308 "negative regulation of cell
growth" evidence=IDA] [GO:0051726 "regulation of cell cycle"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005080 "protein kinase C binding"
evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IDA] [GO:0015935 "small ribosomal
subunit" evidence=ISS] [GO:0030425 "dendrite" evidence=ISS]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=IDA] [GO:0032464 "positive
regulation of protein homooligomerization" evidence=IDA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IMP;IDA] [GO:0030335 "positive regulation of cell
migration" evidence=IDA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IDA] [GO:0001891 "phagocytic cup" evidence=IDA]
[GO:0050765 "negative regulation of phagocytosis" evidence=IMP]
[GO:0008200 "ion channel inhibitor activity" evidence=ISS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2001244 "positive regulation of
intrinsic apoptotic signaling pathway" evidence=IMP] [GO:0006919
"activation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=IMP] [GO:0051898 "negative regulation
of protein kinase B signaling cascade" evidence=IMP] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IMP] [GO:0017148 "negative regulation
of translation" evidence=ISS] [GO:0061099 "negative regulation of
protein tyrosine kinase activity" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0048471
Pathway_Interaction_DB:igf1_pathway GO:GO:0019048 GO:GO:0005080
GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148 GO:GO:0043547
Pathway_Interaction_DB:syndecan_2_pathway GO:GO:0043025
GO:GO:0030425 GO:GO:0043204 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0048511 GO:GO:0007049
GO:GO:0043065 GO:GO:0051726 GO:GO:0001891 GO:GO:0042169
Pathway_Interaction_DB:tnfpathway GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0008656 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 Pathway_Interaction_DB:ar_tf_pathway GO:GO:0030971
GO:GO:0030178 GO:GO:2001244 GO:GO:0007369
Pathway_Interaction_DB:hif1apathway EMBL:CH471165 GO:GO:0032464
GO:GO:2000114 GO:GO:0051302 GO:GO:0051898 GO:GO:2000543
GO:GO:0030292 KO:K14753 OMA:IRVWQVM CTD:10399 HOVERGEN:HBG000277
ChiTaRS:GNB2L1 EMBL:M24194 EMBL:AY159316 EMBL:AY336089
EMBL:AK095666 EMBL:CR456978 EMBL:CR541909 EMBL:AK222488
EMBL:BC000214 EMBL:BC000366 EMBL:BC010119 EMBL:BC014256
EMBL:BC014788 EMBL:BC017287 EMBL:BC019093 EMBL:BC019362
EMBL:BC021993 EMBL:BC032006 IPI:IPI00848226 PIR:B33928
RefSeq:NP_006089.1 UniGene:Hs.5662 PDB:4AOW PDBsum:4AOW
ProteinModelPortal:P63244 SMR:P63244 IntAct:P63244 MINT:MINT-105673
STRING:P63244 PhosphoSite:P63244 DMDM:54037168
REPRODUCTION-2DPAGE:IPI00848226 REPRODUCTION-2DPAGE:P63244
PaxDb:P63244 PRIDE:P63244 DNASU:10399 Ensembl:ENST00000512805
GeneID:10399 KEGG:hsa:10399 UCSC:uc003mni.1 GeneCards:GC05M180663
HGNC:HGNC:4399 HPA:CAB004288 HPA:HPA021676 MIM:176981
neXtProt:NX_P63244 PharmGKB:PA28779 InParanoid:P63244
GenomeRNAi:10399 NextBio:39404 ArrayExpress:P63244 Bgee:P63244
CleanEx:HS_GNB2L1 Genevestigator:P63244 GermOnline:ENSG00000204628
GO:GO:0015935 Uniprot:P63244
Length = 317
Score = 154 (59.3 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 47/175 (26%), Positives = 86/175 (49%)
Query: 14 TLTQTLNGHLRAVSYVKFSHD-GRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGH 72
TL TL GH V+ + + ++ S+S +KT++ + L+ P L+ GH
Sbjct: 6 TLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALR---GH 62
Query: 73 EQGISDLA---------------TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVS 117
+SD+ T+RLWD+ T T+ + +GHT V + F+ + +IVS
Sbjct: 63 SHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVS 122
Query: 118 DTFNETIRIWDIKTGKCLKVLP--AHSDPVTAIDF--NRDGTMIVTSSYDGLYRI 168
+ ++TI++W+ G C + +HS+ V+ + F N +IV+ +D L ++
Sbjct: 123 GSRDKTIKLWNT-LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKV 176
Score = 120 (47.3 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 49/186 (26%), Positives = 83/186 (44%)
Query: 13 YTLTQ-TLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS---ISNFDSTPPSPLQ- 67
Y + Q L GH VS V S DG+ S S + TL + L++ F L
Sbjct: 52 YGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSV 111
Query: 68 KFTGHEQGI---SDLATIRLWDVPTATSLKTLI---GHTNYVFCINFNPQSNR--IVSDT 119
F+ + I S TI+LW+ T K + H+ +V C+ F+P S+ IVS
Sbjct: 112 AFSSDNRQIVSGSRDKTIKLWN--TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCG 169
Query: 120 FNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFI 179
+++ +++W++ K H+ + + + DG++ + DG + D + GK +
Sbjct: 170 WDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLN--EGKHL 227
Query: 180 LVGTLD 185
TLD
Sbjct: 228 Y--TLD 231
Score = 43 (20.2 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 10/32 (31%), Positives = 14/32 (43%)
Query: 173 TPNGKFILVGTLDNTLRLWNYSTRKILKTYSG 204
+P+G G D LW+ + K L T G
Sbjct: 201 SPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG 232
Score = 40 (19.1 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 6/22 (27%), Positives = 13/22 (59%)
Query: 185 DNTLRLWNYSTRKILKTYSGYT 206
D +++WN + K+ + G+T
Sbjct: 171 DKLVKVWNLANCKLKTNHIGHT 192
>UNIPROTKB|P63246 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9823 "Sus scrofa" [GO:0061099 "negative
regulation of protein tyrosine kinase activity" evidence=ISS]
[GO:0005080 "protein kinase C binding" evidence=ISS] [GO:0030496
"midbody" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0001891 "phagocytic cup"
evidence=ISS] [GO:0042169 "SH2 domain binding" evidence=ISS]
[GO:0030971 "receptor tyrosine kinase binding" evidence=ISS]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0050765 "negative regulation of phagocytosis" evidence=ISS]
[GO:0043547 "positive regulation of GTPase activity" evidence=ISS]
[GO:0043065 "positive regulation of apoptotic process"
evidence=ISS] [GO:0032464 "positive regulation of protein
homooligomerization" evidence=ISS] [GO:0032436 "positive regulation
of proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0030335 "positive regulation of cell migration"
evidence=ISS] [GO:0030308 "negative regulation of cell growth"
evidence=ISS] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:0051302
"regulation of cell division" evidence=ISS] [GO:0032880 "regulation
of protein localization" evidence=ISS] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] [GO:0043204
"perikaryon" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0007369 "gastrulation" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0006417 "regulation of translation"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0006417 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
GO:GO:0043547 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032880 GO:GO:0048511
GO:GO:0007049 GO:GO:0043065 GO:GO:0051726 GO:GO:0001891
GO:GO:0042169 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0030971 GO:GO:0030178
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 KO:K14753 CTD:10399 HOVERGEN:HBG000277
EMBL:Z33879 EMBL:AF146043 PIR:S45054 RefSeq:NP_999497.1
UniGene:Ssc.12515 ProteinModelPortal:P63246 SMR:P63246 PRIDE:P63246
GeneID:397605 KEGG:ssc:397605 Uniprot:P63246
Length = 317
Score = 154 (59.3 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 47/175 (26%), Positives = 86/175 (49%)
Query: 14 TLTQTLNGHLRAVSYVKFSHD-GRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGH 72
TL TL GH V+ + + ++ S+S +KT++ + L+ P L+ GH
Sbjct: 6 TLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALR---GH 62
Query: 73 EQGISDLA---------------TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVS 117
+SD+ T+RLWD+ T T+ + +GHT V + F+ + +IVS
Sbjct: 63 SHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVS 122
Query: 118 DTFNETIRIWDIKTGKCLKVLP--AHSDPVTAIDF--NRDGTMIVTSSYDGLYRI 168
+ ++TI++W+ G C + +HS+ V+ + F N +IV+ +D L ++
Sbjct: 123 GSRDKTIKLWNT-LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKV 176
Score = 120 (47.3 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 49/186 (26%), Positives = 83/186 (44%)
Query: 13 YTLTQ-TLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS---ISNFDSTPPSPLQ- 67
Y + Q L GH VS V S DG+ S S + TL + L++ F L
Sbjct: 52 YGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSV 111
Query: 68 KFTGHEQGI---SDLATIRLWDVPTATSLKTLI---GHTNYVFCINFNPQSNR--IVSDT 119
F+ + I S TI+LW+ T K + H+ +V C+ F+P S+ IVS
Sbjct: 112 AFSSDNRQIVSGSRDKTIKLWN--TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCG 169
Query: 120 FNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFI 179
+++ +++W++ K H+ + + + DG++ + DG + D + GK +
Sbjct: 170 WDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLN--EGKHL 227
Query: 180 LVGTLD 185
TLD
Sbjct: 228 Y--TLD 231
Score = 43 (20.2 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 10/32 (31%), Positives = 14/32 (43%)
Query: 173 TPNGKFILVGTLDNTLRLWNYSTRKILKTYSG 204
+P+G G D LW+ + K L T G
Sbjct: 201 SPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG 232
Score = 40 (19.1 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 6/22 (27%), Positives = 13/22 (59%)
Query: 185 DNTLRLWNYSTRKILKTYSGYT 206
D +++WN + K+ + G+T
Sbjct: 171 DKLVKVWNLANCKLKTNHIGHT 192
>UNIPROTKB|B1N1C2 [details] [associations]
symbol:GNB2L1 "Uncharacterized protein" species:9103
"Meleagris gallopavo" [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547 GO:GO:0043025
GO:GO:0030425 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:2001244 GO:GO:0032464 GO:GO:0030292 KO:K14753 OMA:IRVWQVM
CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
EMBL:DQ993255 RefSeq:XP_003211191.1 UniGene:Mga.4509
ProteinModelPortal:B1N1C2 SMR:B1N1C2 PRIDE:B1N1C2
Ensembl:ENSMGAT00000000634 GeneID:100541375 KEGG:mgp:100541375
Uniprot:B1N1C2
Length = 317
Score = 154 (59.3 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 47/175 (26%), Positives = 86/175 (49%)
Query: 14 TLTQTLNGHLRAVSYVKFSHD-GRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGH 72
TL TL GH V+ + + ++ S+S +KT++ + L+ P L+ GH
Sbjct: 6 TLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALR---GH 62
Query: 73 EQGISDLA---------------TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVS 117
+SD+ T+RLWD+ T T+ + +GHT V + F+ + +IVS
Sbjct: 63 SHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVS 122
Query: 118 DTFNETIRIWDIKTGKCLKVLP--AHSDPVTAIDF--NRDGTMIVTSSYDGLYRI 168
+ ++TI++W+ G C + +HS+ V+ + F N +IV+ +D L ++
Sbjct: 123 GSRDKTIKLWNT-LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKV 176
Score = 120 (47.3 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 49/186 (26%), Positives = 83/186 (44%)
Query: 13 YTLTQ-TLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS---ISNFDSTPPSPLQ- 67
Y + Q L GH VS V S DG+ S S + TL + L++ F L
Sbjct: 52 YGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSV 111
Query: 68 KFTGHEQGI---SDLATIRLWDVPTATSLKTLI---GHTNYVFCINFNPQSNR--IVSDT 119
F+ + I S TI+LW+ T K + H+ +V C+ F+P S+ IVS
Sbjct: 112 AFSSDNRQIVSGSRDKTIKLWN--TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCG 169
Query: 120 FNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFI 179
+++ +++W++ K H+ + + + DG++ + DG + D + GK +
Sbjct: 170 WDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLN--EGKHL 227
Query: 180 LVGTLD 185
TLD
Sbjct: 228 Y--TLD 231
Score = 43 (20.2 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 10/32 (31%), Positives = 14/32 (43%)
Query: 173 TPNGKFILVGTLDNTLRLWNYSTRKILKTYSG 204
+P+G G D LW+ + K L T G
Sbjct: 201 SPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG 232
Score = 40 (19.1 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 6/22 (27%), Positives = 13/22 (59%)
Query: 185 DNTLRLWNYSTRKILKTYSGYT 206
D +++WN + K+ + G+T
Sbjct: 171 DKLVKVWNLANCKLKTNHIGHT 192
>UNIPROTKB|Q4R7Y4 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9541 "Macaca fascicularis" [GO:0001891
"phagocytic cup" evidence=ISS] [GO:0001934 "positive regulation of
protein phosphorylation" evidence=ISS] [GO:0005080 "protein kinase
C binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=ISS]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=ISS] [GO:0030308 "negative regulation of cell growth"
evidence=ISS] [GO:0030335 "positive regulation of cell migration"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0030971
"receptor tyrosine kinase binding" evidence=ISS] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=ISS] [GO:0032880
"regulation of protein localization" evidence=ISS] [GO:0042169 "SH2
domain binding" evidence=ISS] [GO:0043025 "neuronal cell body"
evidence=ISS] [GO:0043065 "positive regulation of apoptotic
process" evidence=ISS] [GO:0043547 "positive regulation of GTPase
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0050765 "negative regulation of
phagocytosis" evidence=ISS] [GO:0051302 "regulation of cell
division" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISS] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0048471
GO:GO:0006915 GO:GO:0005080 GO:GO:0006417 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0043547 GO:GO:0043025
GO:GO:0030425 GO:GO:0043204 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032880 GO:GO:0048511 GO:GO:0007049 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0042169 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0030971 GO:GO:0030178 GO:GO:0007369 GO:GO:0032464
GO:GO:2000114 GO:GO:0051302 GO:GO:2000543 GO:GO:0030292
HOVERGEN:HBG000277 EMBL:AB168677 ProteinModelPortal:Q4R7Y4
SMR:Q4R7Y4 PRIDE:Q4R7Y4 Uniprot:Q4R7Y4
Length = 317
Score = 154 (59.3 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 47/175 (26%), Positives = 86/175 (49%)
Query: 14 TLTQTLNGHLRAVSYVKFSHD-GRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGH 72
TL TL GH V+ + + ++ S+S +KT++ + L+ P L+ GH
Sbjct: 6 TLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALR---GH 62
Query: 73 EQGISDLA---------------TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVS 117
+SD+ T+RLWD+ T T+ + +GHT V + F+ + +IVS
Sbjct: 63 SHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVS 122
Query: 118 DTFNETIRIWDIKTGKCLKVLP--AHSDPVTAIDF--NRDGTMIVTSSYDGLYRI 168
+ ++TI++W+ G C + +HS+ V+ + F N +IV+ +D L ++
Sbjct: 123 GSRDKTIKLWNT-LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKV 176
Score = 120 (47.3 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 49/186 (26%), Positives = 83/186 (44%)
Query: 13 YTLTQ-TLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS---ISNFDSTPPSPLQ- 67
Y + Q L GH VS V S DG+ S S + TL + L++ F L
Sbjct: 52 YGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSV 111
Query: 68 KFTGHEQGI---SDLATIRLWDVPTATSLKTLI---GHTNYVFCINFNPQSNR--IVSDT 119
F+ + I S TI+LW+ T K + H+ +V C+ F+P S+ IVS
Sbjct: 112 AFSSDNRQIVSGSRDKTIKLWN--TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCG 169
Query: 120 FNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFI 179
+++ +++W++ K H+ + + + DG++ + DG + D + GK +
Sbjct: 170 WDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLN--EGKHL 227
Query: 180 LVGTLD 185
TLD
Sbjct: 228 Y--TLD 231
Score = 43 (20.2 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 10/32 (31%), Positives = 14/32 (43%)
Query: 173 TPNGKFILVGTLDNTLRLWNYSTRKILKTYSG 204
+P+G G D LW+ + K L T G
Sbjct: 201 SPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG 232
Score = 40 (19.1 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 6/22 (27%), Positives = 13/22 (59%)
Query: 185 DNTLRLWNYSTRKILKTYSGYT 206
D +++WN + K+ + G+T
Sbjct: 171 DKLVKVWNLANCKLKTNHIGHT 192
>UNIPROTKB|Q5U275 [details] [associations]
symbol:gnb2l1 "LOC495666 protein" species:8355 "Xenopus
laevis" [GO:0005737 "cytoplasm" evidence=ISS] [GO:0043025 "neuronal
cell body" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 KO:K14753 HOVERGEN:HBG000277 EMBL:BC086231
RefSeq:NP_001088625.1 UniGene:Xl.49445 ProteinModelPortal:Q5U275
SMR:Q5U275 PRIDE:Q5U275 GeneID:495666 KEGG:xla:495666
Xenbase:XB-GENE-5927586 Uniprot:Q5U275
Length = 317
Score = 154 (59.3 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 47/175 (26%), Positives = 86/175 (49%)
Query: 14 TLTQTLNGHLRAVSYVKFSHD-GRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGH 72
TL TL GH V+ + + ++ S+S +KT++ + L+ P L+ GH
Sbjct: 6 TLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALR---GH 62
Query: 73 EQGISDLA---------------TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVS 117
+SD+ T+RLWD+ T T+ + +GHT V + F+ + +IVS
Sbjct: 63 SHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVS 122
Query: 118 DTFNETIRIWDIKTGKCLKVLP--AHSDPVTAIDF--NRDGTMIVTSSYDGLYRI 168
+ ++TI++W+ G C + +HS+ V+ + F N +IV+ +D L ++
Sbjct: 123 GSRDKTIKLWNT-LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKV 176
Score = 120 (47.3 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 49/186 (26%), Positives = 83/186 (44%)
Query: 13 YTLTQ-TLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS---ISNFDSTPPSPLQ- 67
Y + Q L GH VS V S DG+ S S + TL + L++ F L
Sbjct: 52 YGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSV 111
Query: 68 KFTGHEQGI---SDLATIRLWDVPTATSLKTLI---GHTNYVFCINFNPQSNR--IVSDT 119
F+ + I S TI+LW+ T K + H+ +V C+ F+P S+ IVS
Sbjct: 112 AFSSDNRQIVSGSRDKTIKLWN--TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCG 169
Query: 120 FNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFI 179
+++ +++W++ K H+ + + + DG++ + DG + D + GK +
Sbjct: 170 WDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLN--EGKHL 227
Query: 180 LVGTLD 185
TLD
Sbjct: 228 Y--TLD 231
Score = 43 (20.2 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 10/32 (31%), Positives = 14/32 (43%)
Query: 173 TPNGKFILVGTLDNTLRLWNYSTRKILKTYSG 204
+P+G G D LW+ + K L T G
Sbjct: 201 SPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG 232
Score = 40 (19.1 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 6/22 (27%), Positives = 13/22 (59%)
Query: 185 DNTLRLWNYSTRKILKTYSGYT 206
D +++WN + K+ + G+T
Sbjct: 171 DKLVKVWNLANCKLKTNHIGHT 192
>MGI|MGI:101849 [details] [associations]
symbol:Gnb2l1 "guanine nucleotide binding protein (G
protein), beta polypeptide 2 like 1" species:10090 "Mus musculus"
[GO:0001891 "phagocytic cup" evidence=ISO] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISO] [GO:0004872
"receptor activity" evidence=ISA] [GO:0005080 "protein kinase C
binding" evidence=ISO;ISA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0008104 "protein localization"
evidence=ISA] [GO:0008200 "ion channel inhibitor activity"
evidence=IDA] [GO:0008656 "cysteine-type endopeptidase activator
activity involved in apoptotic process" evidence=ISO] [GO:0015935
"small ribosomal subunit" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=ISO] [GO:0030308 "negative regulation of cell
growth" evidence=ISO] [GO:0030335 "positive regulation of cell
migration" evidence=ISO] [GO:0030425 "dendrite" evidence=IDA]
[GO:0030496 "midbody" evidence=ISO] [GO:0030971 "receptor tyrosine
kinase binding" evidence=ISO] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0032464 "positive regulation of protein
homooligomerization" evidence=ISO] [GO:0035556 "intracellular
signal transduction" evidence=ISA] [GO:0040008 "regulation of
growth" evidence=IEA] [GO:0042169 "SH2 domain binding"
evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0043065
"positive regulation of apoptotic process" evidence=ISO]
[GO:0043547 "positive regulation of GTPase activity" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0050765 "negative
regulation of phagocytosis" evidence=ISO] [GO:0051726 "regulation
of cell cycle" evidence=ISO] [GO:0051898 "negative regulation of
protein kinase B signaling cascade" evidence=ISO] [GO:0061099
"negative regulation of protein tyrosine kinase activity"
evidence=ISO] [GO:0090003 "regulation of establishment of protein
localization to plasma membrane" evidence=ISO] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:101849 GO:GO:0005634 GO:GO:0048471
GO:GO:0006915 GO:GO:0005080 GO:GO:0008104 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148 GO:GO:0043547
GO:GO:0035556 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004872
GO:GO:0032880 GO:GO:0048511 GO:GO:0007049 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0042169 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 GO:GO:0030971 GO:GO:0030178 GO:GO:2001244
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 EMBL:CH466575
GO:GO:0051302 GO:GO:2000543 GO:GO:0030292 KO:K14753 OMA:IRVWQVM
CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
OrthoDB:EOG4933J5 ChiTaRS:GNB2L1 GO:GO:0015935 EMBL:D29802
EMBL:X75313 EMBL:AK002493 EMBL:AK012242 EMBL:AK017772 EMBL:AK051226
EMBL:AK159797 EMBL:AK160528 EMBL:AK160739 EMBL:AK161234
EMBL:AK166417 EMBL:AK166786 EMBL:AK166800 EMBL:AK166889
EMBL:AK166945 EMBL:AK168086 EMBL:AK168096 EMBL:AK168196
EMBL:AK168349 EMBL:AL645849 EMBL:BC046760 EMBL:AF295529
IPI:IPI00317740 PIR:S38398 RefSeq:NP_032169.1 UniGene:Mm.5305
ProteinModelPortal:P68040 SMR:P68040 IntAct:P68040 STRING:P68040
REPRODUCTION-2DPAGE:P68040 SWISS-2DPAGE:P68040 PaxDb:P68040
PRIDE:P68040 Ensembl:ENSMUST00000020640 GeneID:14694 KEGG:mmu:14694
UCSC:uc007ipa.1 InParanoid:Q9CSQ0 NextBio:286639 Bgee:P68040
Genevestigator:P68040 GermOnline:ENSMUSG00000020372 Uniprot:P68040
Length = 317
Score = 154 (59.3 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 47/175 (26%), Positives = 86/175 (49%)
Query: 14 TLTQTLNGHLRAVSYVKFSHD-GRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGH 72
TL TL GH V+ + + ++ S+S +KT++ + L+ P L+ GH
Sbjct: 6 TLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALR---GH 62
Query: 73 EQGISDLA---------------TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVS 117
+SD+ T+RLWD+ T T+ + +GHT V + F+ + +IVS
Sbjct: 63 SHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVS 122
Query: 118 DTFNETIRIWDIKTGKCLKVLP--AHSDPVTAIDF--NRDGTMIVTSSYDGLYRI 168
+ ++TI++W+ G C + +HS+ V+ + F N +IV+ +D L ++
Sbjct: 123 GSRDKTIKLWNT-LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKV 176
Score = 120 (47.3 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 49/186 (26%), Positives = 83/186 (44%)
Query: 13 YTLTQ-TLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS---ISNFDSTPPSPLQ- 67
Y + Q L GH VS V S DG+ S S + TL + L++ F L
Sbjct: 52 YGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSV 111
Query: 68 KFTGHEQGI---SDLATIRLWDVPTATSLKTLI---GHTNYVFCINFNPQSNR--IVSDT 119
F+ + I S TI+LW+ T K + H+ +V C+ F+P S+ IVS
Sbjct: 112 AFSSDNRQIVSGSRDKTIKLWN--TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCG 169
Query: 120 FNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFI 179
+++ +++W++ K H+ + + + DG++ + DG + D + GK +
Sbjct: 170 WDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLN--EGKHL 227
Query: 180 LVGTLD 185
TLD
Sbjct: 228 Y--TLD 231
Score = 43 (20.2 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 10/32 (31%), Positives = 14/32 (43%)
Query: 173 TPNGKFILVGTLDNTLRLWNYSTRKILKTYSG 204
+P+G G D LW+ + K L T G
Sbjct: 201 SPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG 232
Score = 40 (19.1 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 6/22 (27%), Positives = 13/22 (59%)
Query: 185 DNTLRLWNYSTRKILKTYSGYT 206
D +++WN + K+ + G+T
Sbjct: 171 DKLVKVWNLANCKLKTNHIGHT 192
>RGD|69229 [details] [associations]
symbol:Gnb2l1 "guanine nucleotide binding protein (G protein),
beta polypeptide 2 like 1" species:10116 "Rattus norvegicus"
[GO:0001891 "phagocytic cup" evidence=ISO;ISS] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISO;ISS] [GO:0005080
"protein kinase C binding" evidence=IC;ISO;IDA] [GO:0005634
"nucleus" evidence=ISO;ISS] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0006919 "activation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=ISO] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007205 "protein kinase C-activating
G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0007369 "gastrulation" evidence=IEA] [GO:0008200 "ion channel
inhibitor activity" evidence=IEA;ISO] [GO:0008656 "cysteine-type
endopeptidase activator activity involved in apoptotic process"
evidence=IEA;ISO] [GO:0015935 "small ribosomal subunit"
evidence=IDA] [GO:0017148 "negative regulation of translation"
evidence=IMP] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0030178 "negative regulation of Wnt receptor
signaling pathway" evidence=ISS] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=ISO;ISS] [GO:0030308 "negative
regulation of cell growth" evidence=ISO;ISS] [GO:0030335 "positive
regulation of cell migration" evidence=ISO;ISS] [GO:0030425
"dendrite" evidence=IEA;ISO] [GO:0030496 "midbody" evidence=ISO;ISS]
[GO:0030971 "receptor tyrosine kinase binding" evidence=ISO;ISS]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0032464 "positive
regulation of protein homooligomerization" evidence=ISO;ISS]
[GO:0032880 "regulation of protein localization" evidence=ISS]
[GO:0042169 "SH2 domain binding" evidence=ISO;ISS] [GO:0043025
"neuronal cell body" evidence=ISO;ISS] [GO:0043065 "positive
regulation of apoptotic process" evidence=ISO;ISS] [GO:0043204
"perikaryon" evidence=IEA] [GO:0043547 "positive regulation of
GTPase activity" evidence=ISO;ISS] [GO:0048471 "perinuclear region
of cytoplasm" evidence=ISO;ISS] [GO:0048511 "rhythmic process"
evidence=IEA] [GO:0050765 "negative regulation of phagocytosis"
evidence=ISO;ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISO;ISS] [GO:0051898 "negative regulation of protein kinase
B signaling cascade" evidence=IEA;ISO] [GO:0061099 "negative
regulation of protein tyrosine kinase activity" evidence=ISO]
[GO:0090003 "regulation of establishment of protein localization to
plasma membrane" evidence=IMP] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] [GO:2001244 "positive
regulation of intrinsic apoptotic signaling pathway"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:69229 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148
GO:GO:0043547 GO:GO:0007205 GO:GO:0043025 GO:GO:0030425
GO:GO:0043204 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 GO:GO:0007049 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0042169 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:0090003 GO:GO:0030971 GO:GO:0030178 GO:GO:2001244
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753 CTD:10399
GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277 OrthoDB:EOG4933J5
GO:GO:0015935 EMBL:U03390 EMBL:BC063809 IPI:IPI00231134 PIR:A36986
RefSeq:NP_570090.2 RefSeq:XP_003751228.1 UniGene:Rn.55487
ProteinModelPortal:P63245 SMR:P63245 IntAct:P63245 MINT:MINT-4095812
STRING:P63245 PhosphoSite:P63245 PRIDE:P63245
Ensembl:ENSRNOT00000003334 GeneID:100911540 GeneID:83427
KEGG:rno:100911540 KEGG:rno:83427 UCSC:RGD:69229 InParanoid:P63245
NextBio:615845 Genevestigator:P63245 GermOnline:ENSRNOG00000002390
Uniprot:P63245
Length = 317
Score = 154 (59.3 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 47/175 (26%), Positives = 86/175 (49%)
Query: 14 TLTQTLNGHLRAVSYVKFSHD-GRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGH 72
TL TL GH V+ + + ++ S+S +KT++ + L+ P L+ GH
Sbjct: 6 TLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALR---GH 62
Query: 73 EQGISDLA---------------TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVS 117
+SD+ T+RLWD+ T T+ + +GHT V + F+ + +IVS
Sbjct: 63 SHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVS 122
Query: 118 DTFNETIRIWDIKTGKCLKVLP--AHSDPVTAIDF--NRDGTMIVTSSYDGLYRI 168
+ ++TI++W+ G C + +HS+ V+ + F N +IV+ +D L ++
Sbjct: 123 GSRDKTIKLWNT-LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKV 176
Score = 120 (47.3 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 49/186 (26%), Positives = 83/186 (44%)
Query: 13 YTLTQ-TLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS---ISNFDSTPPSPLQ- 67
Y + Q L GH VS V S DG+ S S + TL + L++ F L
Sbjct: 52 YGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSV 111
Query: 68 KFTGHEQGI---SDLATIRLWDVPTATSLKTLI---GHTNYVFCINFNPQSNR--IVSDT 119
F+ + I S TI+LW+ T K + H+ +V C+ F+P S+ IVS
Sbjct: 112 AFSSDNRQIVSGSRDKTIKLWN--TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCG 169
Query: 120 FNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFI 179
+++ +++W++ K H+ + + + DG++ + DG + D + GK +
Sbjct: 170 WDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLN--EGKHL 227
Query: 180 LVGTLD 185
TLD
Sbjct: 228 Y--TLD 231
Score = 43 (20.2 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 10/32 (31%), Positives = 14/32 (43%)
Query: 173 TPNGKFILVGTLDNTLRLWNYSTRKILKTYSG 204
+P+G G D LW+ + K L T G
Sbjct: 201 SPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG 232
Score = 40 (19.1 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 6/22 (27%), Positives = 13/22 (59%)
Query: 185 DNTLRLWNYSTRKILKTYSGYT 206
D +++WN + K+ + G+T
Sbjct: 171 DKLVKVWNLANCKLKTNHIGHT 192
>POMBASE|SPBC1289.11 [details] [associations]
symbol:spf38 "splicing factor Spf38" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IC] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC1289.11
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0045292 PIR:T39362 RefSeq:NP_596835.1
ProteinModelPortal:O94620 IntAct:O94620 STRING:O94620
EnsemblFungi:SPBC1289.11.1 GeneID:2539984 KEGG:spo:SPBC1289.11
HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE OrthoDB:EOG43BQZ4
NextBio:20801127 Uniprot:O94620
Length = 340
Score = 163 (62.4 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 64/255 (25%), Positives = 119/255 (46%)
Query: 19 LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNF-----DSTPPSPLQKF-TGH 72
LNG A++ +++S D R++ SS++ L+++ S + + L G
Sbjct: 89 LNGCKGAITDLQWSRDSRVVYCSSSDTHLMSWDAVSGQKIRKHKGHAGVVNALDVLKVGS 148
Query: 73 E--QGISDLATIRLWDVPTATSLKTLIGHTNY-VFCINFNPQSNRIVSDTFNETIRIWDI 129
E +SD T+++WD + +KT+ Y + + Q ++ + I+IWD+
Sbjct: 149 ELLTSVSDDCTMKVWDSRSKDCIKTI--EEKYPLTAVAIAQQGTQVFIGGIDGAIKIWDL 206
Query: 130 KTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILD----ASTPNGKFILVGTLD 185
+ C VL H D +T++ ++DG+ ++++S D RI D AS I G +
Sbjct: 207 RNNHCSHVLKGHKDIITSLAISKDGSSLLSNSMDNTVRIFDVKPFASAQRQLQIFEGAIH 266
Query: 186 ----NTLRL-WNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIV-SHRDPVISVASHPA 239
N L + W+ ++R + S + Y S+T + +Y++ H V V HP
Sbjct: 267 GQEHNLLGVAWSRNSRFVGAGSSD--KNVYVWSATGDL---RYVLPGHEGSVNHVDFHPH 321
Query: 240 KNIIASGALDNDRTM 254
++II S +DRT+
Sbjct: 322 QDIILS--CSSDRTI 334
>UNIPROTKB|G8JL27 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9031 "Gallus gallus" [GO:0001891 "phagocytic
cup" evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=IEA] [GO:0019903 "protein
phosphatase binding" evidence=IEA] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0050765 "negative regulation of
phagocytosis" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:2001244 "positive regulation
of intrinsic apoptotic signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 EMBL:AADN02030122
Ensembl:ENSGALT00000000171 Uniprot:G8JL27
Length = 320
Score = 154 (59.3 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 47/175 (26%), Positives = 86/175 (49%)
Query: 14 TLTQTLNGHLRAVSYVKFSHD-GRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGH 72
TL TL GH V+ + + ++ S+S +KT++ + L+ P L+ GH
Sbjct: 9 TLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALR---GH 65
Query: 73 EQGISDLA---------------TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVS 117
+SD+ T+RLWD+ T T+ + +GHT V + F+ + +IVS
Sbjct: 66 SHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVS 125
Query: 118 DTFNETIRIWDIKTGKCLKVLP--AHSDPVTAIDF--NRDGTMIVTSSYDGLYRI 168
+ ++TI++W+ G C + +HS+ V+ + F N +IV+ +D L ++
Sbjct: 126 GSRDKTIKLWNT-LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKV 179
Score = 120 (47.3 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 49/186 (26%), Positives = 83/186 (44%)
Query: 13 YTLTQ-TLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS---ISNFDSTPPSPLQ- 67
Y + Q L GH VS V S DG+ S S + TL + L++ F L
Sbjct: 55 YGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSV 114
Query: 68 KFTGHEQGI---SDLATIRLWDVPTATSLKTLI---GHTNYVFCINFNPQSNR--IVSDT 119
F+ + I S TI+LW+ T K + H+ +V C+ F+P S+ IVS
Sbjct: 115 AFSSDNRQIVSGSRDKTIKLWN--TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCG 172
Query: 120 FNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFI 179
+++ +++W++ K H+ + + + DG++ + DG + D + GK +
Sbjct: 173 WDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLN--EGKHL 230
Query: 180 LVGTLD 185
TLD
Sbjct: 231 Y--TLD 234
Score = 43 (20.2 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 10/32 (31%), Positives = 14/32 (43%)
Query: 173 TPNGKFILVGTLDNTLRLWNYSTRKILKTYSG 204
+P+G G D LW+ + K L T G
Sbjct: 204 SPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG 235
Score = 40 (19.1 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 6/22 (27%), Positives = 13/22 (59%)
Query: 185 DNTLRLWNYSTRKILKTYSGYT 206
D +++WN + K+ + G+T
Sbjct: 174 DKLVKVWNLANCKLKTNHIGHT 195
>ZFIN|ZDB-GENE-070112-2212 [details] [associations]
symbol:traf7 "TNF receptor-associated factor 7"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR008974 InterPro:IPR013323 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089 PROSITE:PS50294
SMART:SM00184 SMART:SM00320 Pfam:PF00097 Prosite:PS00518
ZFIN:ZDB-GENE-070112-2212 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 SUPFAM:SSF49599
Gene3D:3.90.890.10 GeneTree:ENSGT00690000101849 CTD:84231
HOGENOM:HOG000220840 HOVERGEN:HBG055270 KO:K10646 OMA:ALCIQGN
OrthoDB:EOG4BRWK8 EMBL:BX572621 EMBL:CR450851 EMBL:BC129220
IPI:IPI00488353 RefSeq:NP_001073654.1 UniGene:Dr.124692
Ensembl:ENSDART00000084579 Ensembl:ENSDART00000132703 GeneID:563746
KEGG:dre:563746 InParanoid:A1L1U9 NextBio:20885047 Uniprot:A1L1U9
Length = 639
Score = 167 (63.8 bits), Expect = 6.4e-10, P = 6.4e-10
Identities = 67/266 (25%), Positives = 124/266 (46%)
Query: 2 SSDRSL---ESFRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNF 58
SSD+S+ ++ Y +TL GH V + G L S SA+ T++ + + ++
Sbjct: 384 SSDKSIKVWDTCTTYKCQKTLEGHDGIV--LALCIQGNKLYSGSADCTIIVWDIQTLQKV 441
Query: 59 DS--TPPSPLQKF-TGHEQGIS-DLATIRLWD-VPTATSLKT-LIGHTNYVFCINFNPQS 112
++ +P+ + H S L I++WD V T LK L G ++V + +
Sbjct: 442 NTIRAHDNPVCTLVSSHNMLFSGSLKAIKVWDIVGTELKLKKELTGLNHWVRALVAS--Q 499
Query: 113 NRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDAS 172
N + S ++ +TI+IWDI++ +C+ VL V +I IV +Y+ L + D
Sbjct: 500 NHLYSGSY-QTIKIWDIRSLECVHVLQTSGGSVYSIAVTNHH--IVCGTYENLIHVWDIE 556
Query: 173 TPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVI 232
+ L G + L ST K +S + + S ++ + ++ H+ V
Sbjct: 557 SKEQVRTLTGHVGTVYALAVISTPDQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGSVT 616
Query: 233 SVASHPAKNIIASGALDNDRTMKIWT 258
++A ++ + SGA+D+ T+K+WT
Sbjct: 617 ALAV--SRGRLFSGAVDS--TVKVWT 638
>DICTYBASE|DDB_G0278285 [details] [associations]
symbol:copB2 "coatomer protein complex beta 2 subunit
(beta prime)" species:44689 "Dictyostelium discoideum" [GO:0030117
"membrane coat" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=ISS]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0278285 GO:GO:0006886 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GenomeReviews:CM000152_GR GO:GO:0005198 EMBL:AAFI02000023
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030126
HSSP:P63005 InterPro:IPR016453 PIRSF:PIRSF005567 OMA:LRNKAFG
RefSeq:XP_642264.1 ProteinModelPortal:Q54YD8 STRING:Q54YD8
EnsemblProtists:DDB0233798 GeneID:8621473 KEGG:ddi:DDB_G0278285
ProtClustDB:CLSZ2729111 Uniprot:Q54YD8
Length = 1005
Score = 169 (64.5 bits), Expect = 6.8e-10, P = 6.8e-10
Identities = 56/212 (26%), Positives = 102/212 (48%)
Query: 55 ISNFDSTPPSPLQ--KFTGHEQGI---SDLATIRLWDVPTATSLKTLIGHTNYVFCINFN 109
+ +F+ +P +P++ +F +Q I SD IR+++ T +K+ H +Y+ CI +
Sbjct: 50 VKSFEVSPNNPVRTARFIAKKQWIVTGSDDTYIRVYNYNTMEKIKSFEAHADYIRCIIVH 109
Query: 110 PQSNRIVSDTFNETIRIWDIKTG-KCLKVLPAHSDPVTAIDFN-RDGTMIVTSSYDGLYR 167
P I+S + + I++WD + G +V HS V +I +N +D T+S D +
Sbjct: 110 PTLPYILSSSDDMFIKLWDYEKGWSNTQVFEGHSHYVMSIAWNPKDTNQFATASLDKTVK 169
Query: 168 ILDASTPNGKFILVGTLD--NTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIV 225
+ ++P+ F L G N++ ++ + L SG + I S T + +
Sbjct: 170 VWSINSPHPHFTLEGHEKGINSVEYFSGGEKPYL--ISGADDKLVKIWDYQSKTCVQTLE 227
Query: 226 SHRDPVISVASHPAKNIIASGALDNDRTMKIW 257
H + V V HP +I SG+ D T+K+W
Sbjct: 228 GHSNNVSVVCYHPELPLILSGS--EDGTVKLW 257
Score = 121 (47.7 bits), Expect = 0.00027, P = 0.00027
Identities = 40/158 (25%), Positives = 80/158 (50%)
Query: 16 TQTLNGHLRAVSYVKFS-HDGRLLTSSSAEKTLLTYSLSSIS-NFD----STPPSPLQKF 69
TQ GH V + ++ D ++S +KT+ +S++S +F + ++ F
Sbjct: 136 TQVFEGHSHYVMSIAWNPKDTNQFATASLDKTVKVWSINSPHPHFTLEGHEKGINSVEYF 195
Query: 70 TGHEQG--IS--DLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIR 125
+G E+ IS D +++WD + T ++TL GH+N V + ++P+ I+S + + T++
Sbjct: 196 SGGEKPYLISGADDKLVKIWDYQSKTCVQTLEGHSNNVSVVCYHPELPLILSGSEDGTVK 255
Query: 126 IWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYD 163
+W T + + L V +++F R G+ + YD
Sbjct: 256 LWHSSTYRLERTLNYGMGFVWSMNFLR-GSNFIGLGYD 292
>UNIPROTKB|Q6GMD2 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GO:GO:0055087 CTD:80349 HOVERGEN:HBG059813 KO:K12602
EMBL:BC074136 RefSeq:NP_001086055.1 UniGene:Xl.23922
ProteinModelPortal:Q6GMD2 GeneID:444484 KEGG:xla:444484
Xenbase:XB-GENE-5751613 Uniprot:Q6GMD2
Length = 305
Score = 161 (61.7 bits), Expect = 7.1e-10, P = 7.1e-10
Identities = 44/159 (27%), Positives = 74/159 (46%)
Query: 19 LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS---ISNFDSTPPSPLQ-KFTGHEQ 74
L GH V V S G ++ SSS + + + L S I + D+ P F+ Q
Sbjct: 60 LEGHQLGVVSVDVSPSGNIMASSSLDAHIRLWDLESGKQIRSIDAGPVDAWSVAFSPDSQ 119
Query: 75 GI---SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKT 131
+ S + + ++ V T +L ++ I ++P + S + I I+DI T
Sbjct: 120 HLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIAT 179
Query: 132 GKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
GK L L H+ P+ ++ F+ D ++VT+S DG +I D
Sbjct: 180 GKLLHTLEGHAMPIRSLTFSTDSQLLVTASDDGYIKIYD 218
Score = 150 (57.9 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 36/149 (24%), Positives = 74/149 (49%)
Query: 29 VKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTP--PSPLQK--FTGHEQGI---SDLAT 81
+ +S DG+ L S + + + + +++ + P++ F+ Q + SD
Sbjct: 154 IAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSTDSQLLVTASDDGY 213
Query: 82 IRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAH 141
I+++DV A+ TL GH ++V + F+P VS + ++++++WD+ C+ H
Sbjct: 214 IKIYDVQHASLAATLSGHGSWVLNVAFSPDDAHFVSSSSDKSVKVWDVSARTCVHTFLDH 273
Query: 142 SDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
D V + +NR+G+ IV+ D + D
Sbjct: 274 QDQVWGVKYNRNGSKIVSVGDDQEIHVYD 302
Score = 111 (44.1 bits), Expect = 0.00065, P = 0.00065
Identities = 39/142 (27%), Positives = 62/142 (43%)
Query: 32 SHDGRLLTSSSAEKTLLTYSLSSISNFD-STPPSPLQKFTGHEQGISDLATIRLWDVPTA 90
SH G++ E YSL + F S SP K+ G D I ++D+ T
Sbjct: 125 SHVGKV-NIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLA--SGAID-GIINIFDIATG 180
Query: 91 TSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDF 150
L TL GH + + F+ S +V+ + + I+I+D++ L H V + F
Sbjct: 181 KLLHTLEGHAMPIRSLTFSTDSQLLVTASDDGYIKIYDVQHASLAATLSGHGSWVLNVAF 240
Query: 151 NRDGTMIVTSSYDGLYRILDAS 172
+ D V+SS D ++ D S
Sbjct: 241 SPDDAHFVSSSSDKSVKVWDVS 262
>UNIPROTKB|I3LI24 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9823 "Sus scrofa" [GO:2001244 "positive
regulation of intrinsic apoptotic signaling pathway" evidence=IEA]
[GO:0051898 "negative regulation of protein kinase B signaling
cascade" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0050765 "negative regulation of phagocytosis"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0043547 "positive regulation of GTPase activity"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0042169 "SH2 domain binding" evidence=IEA]
[GO:0032464 "positive regulation of protein homooligomerization"
evidence=IEA] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0030971 "receptor tyrosine kinase binding" evidence=IEA]
[GO:0030496 "midbody" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030335 "positive regulation of cell migration"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0008656 "cysteine-type endopeptidase activator
activity involved in apoptotic process" evidence=IEA] [GO:0008200
"ion channel inhibitor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0001891 "phagocytic cup"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0048471 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0043547 GO:GO:0043025 GO:GO:0030425
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0008200 GO:GO:2001244
GO:GO:0032464 GO:GO:0030292 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 Ensembl:ENSSSCT00000022602
Uniprot:I3LI24
Length = 317
Score = 153 (58.9 bits), Expect = 7.5e-10, Sum P(2) = 7.5e-10
Identities = 48/175 (27%), Positives = 83/175 (47%)
Query: 14 TLTQTLNGHLRAVSYVK-FSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGH 72
TL TL GH V+ + + RL S +KT++ + L+ P L+ GH
Sbjct: 6 TLRGTLKGHNGWVTQLSAHAETQRLFLSCRRDKTIIMWKLTRDETNYGIPQRALR---GH 62
Query: 73 EQGISDLA---------------TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVS 117
+SD+ T+RLWD+ T T+ + +GHT V + F+ + +IVS
Sbjct: 63 SHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVS 122
Query: 118 DTFNETIRIWDIKTGKCLKVLP--AHSDPVTAIDF--NRDGTMIVTSSYDGLYRI 168
+ ++TI++W+ G C + +HS+ V+ + F N +IV+ +D L +
Sbjct: 123 GSRDKTIKLWNT-LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVNV 176
Score = 118 (46.6 bits), Expect = 0.00011, P = 0.00011
Identities = 49/186 (26%), Positives = 82/186 (44%)
Query: 13 YTLTQ-TLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS---ISNFDSTPPSPLQ- 67
Y + Q L GH VS V S DG+ S S + TL + L++ F L
Sbjct: 52 YGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSV 111
Query: 68 KFTGHEQGI---SDLATIRLWDVPTATSLKTLI---GHTNYVFCINFNPQSNR--IVSDT 119
F+ + I S TI+LW+ T K + H+ +V C+ F+P S+ IVS
Sbjct: 112 AFSSDNRQIVSGSRDKTIKLWN--TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCG 169
Query: 120 FNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFI 179
+++ + +W++ K H+ + + + DG++ + DG + D + GK +
Sbjct: 170 WDKLVNVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLN--EGKHL 227
Query: 180 LVGTLD 185
TLD
Sbjct: 228 Y--TLD 231
Score = 43 (20.2 bits), Expect = 7.5e-10, Sum P(2) = 7.5e-10
Identities = 10/32 (31%), Positives = 14/32 (43%)
Query: 173 TPNGKFILVGTLDNTLRLWNYSTRKILKTYSG 204
+P+G G D LW+ + K L T G
Sbjct: 201 SPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG 232
Score = 38 (18.4 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 6/22 (27%), Positives = 12/22 (54%)
Query: 185 DNTLRLWNYSTRKILKTYSGYT 206
D + +WN + K+ + G+T
Sbjct: 171 DKLVNVWNLANCKLKTNHIGHT 192
>ZFIN|ZDB-GENE-030131-5987 [details] [associations]
symbol:taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:7955
"Danio rerio" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-5987
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OrthoDB:EOG4NCMCF EMBL:BC056820
IPI:IPI00498551 RefSeq:NP_956146.1 UniGene:Dr.80603
ProteinModelPortal:Q6PGV3 STRING:Q6PGV3 GeneID:334055
KEGG:dre:334055 InParanoid:Q6PGV3 NextBio:20810247
ArrayExpress:Q6PGV3 Uniprot:Q6PGV3
Length = 601
Score = 166 (63.5 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 41/168 (24%), Positives = 74/168 (44%)
Query: 32 SHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGHEQGISDLATIRLWDVPTAT 91
SHD S A L +S+ D P + G +D T+RLW
Sbjct: 415 SHDRTARLWSFARTYPLRLYAGHLSDVDCVKFHPNSNYIA--TGSTD-KTVRLWSTRQGA 471
Query: 92 SLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFN 151
S++ GH V + F+P + S ++ +++WD+ +G K L H+D ++++ F+
Sbjct: 472 SVRLFTGHRGPVLTLAFSPNGKYLASAGEDQRLKLWDLASGGLFKDLRGHTDTISSLSFS 531
Query: 152 RDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYSTRKIL 199
+D +++ ++S D R+ D +G G + + ST IL
Sbjct: 532 QDSSLVASASMDNTVRVWDIRNAHGSAPTDGCSSELIGQYTGSTSNIL 579
Score = 157 (60.3 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 45/175 (25%), Positives = 77/175 (44%)
Query: 17 QTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISN-------------FDSTPP 63
+TL GH V F D L S S + T+ + L S +N D +P
Sbjct: 348 KTLRGHSGPVYRTAFLTDASGLLSCSEDSTVRYWDLKSFTNTVLYRGHAYPVWDVDVSPC 407
Query: 64 SPLQKFTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNET 123
S H++ T RLW L+ GH + V C+ F+P SN I + + ++T
Sbjct: 408 SLYFSTASHDR------TARLWSFARTYPLRLYAGHLSDVDCVKFHPNSNYIATGSTDKT 461
Query: 124 IRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKF 178
+R+W + G +++ H PV + F+ +G + ++ D ++ D ++ G F
Sbjct: 462 VRLWSTRQGASVRLFTGHRGPVLTLAFSPNGKYLASAGEDQRLKLWDLAS-GGLF 515
Score = 134 (52.2 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 40/139 (28%), Positives = 71/139 (51%)
Query: 2 SSDRS--LESF-RPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSL---SSI 55
S DR+ L SF R Y L + GHL V VKF + + + S +KT+ +S +S+
Sbjct: 415 SHDRTARLWSFARTYPL-RLYAGHLSDVDCVKFHPNSNYIATGSTDKTVRLWSTRQGASV 473
Query: 56 SNFDS-TPPSPLQKFTGHEQGISDLAT---IRLWDVPTATSLKTLIGHTNYVFCINFNPQ 111
F P F+ + + ++ ++LWD+ + K L GHT+ + ++F+
Sbjct: 474 RLFTGHRGPVLTLAFSPNGKYLASAGEDQRLKLWDLASGGLFKDLRGHTDTISSLSFSQD 533
Query: 112 SNRIVSDTFNETIRIWDIK 130
S+ + S + + T+R+WDI+
Sbjct: 534 SSLVASASMDNTVRVWDIR 552
Score = 134 (52.2 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 60/248 (24%), Positives = 108/248 (43%)
Query: 23 LRAVSYVKFSHDGRLLTSS--SAEKTLLTYSL-SSISNFDSTPPSPLQKFTGHEQGISDL 79
L V + F H +LL ++ SA+ LL +S S L K H+ +D+
Sbjct: 268 LTTVCFYAFQHTEQLLNTAEVSADSRLLAAGFDNSAVKLWSLRARKL-KAGPHK---ADV 323
Query: 80 ATIRL-WDV---------PTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDI 129
+ IRL DV + + +KTL GH+ V+ F ++ ++S + + T+R WD+
Sbjct: 324 SKIRLACDVLEEEADDEDASGSEIKTLRGHSGPVYRTAFLTDASGLLSCSEDSTVRYWDL 383
Query: 130 KTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLR 189
K+ + H+ PV +D + T+S+D R+ + + G L +
Sbjct: 384 KSFTNTVLYRGHAYPVWDVDVSPCSLYFSTASHDRTARLWSFARTYPLRLYAGHLSDVDC 443
Query: 190 LWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALD 249
+ + + T G T+ + ST + + HR PV+++A P +AS
Sbjct: 444 VKFHPNSNYIAT--GSTDKTVRLWSTRQGASVRLFTGHRGPVLTLAFSPNGKYLASAG-- 499
Query: 250 NDRTMKIW 257
D+ +K+W
Sbjct: 500 EDQRLKLW 507
Score = 122 (48.0 bits), Expect = 0.00011, P = 0.00011
Identities = 45/191 (23%), Positives = 86/191 (45%)
Query: 77 SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLK 136
S+ +T+R WD+ + T+ GH V+ ++ +P S + + + T R+W L+
Sbjct: 373 SEDSTVRYWDLKSFTNTVLYRGHAYPVWDVDVSPCSLYFSTASHDRTARLWSFARTYPLR 432
Query: 137 VLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYSTR 196
+ H V + F+ + I T S D R+ ST G ++RL+
Sbjct: 433 LYAGHLSDVDCVKFHPNSNYIATGSTDKTVRLW--STRQGA---------SVRLFTGHRG 481
Query: 197 KILKTYSGYTNSKYCISS-------TFSVTNG---KYIVSHRDPVISVASHPAKNIIASG 246
+L T + N KY S+ + + +G K + H D + S++ +++AS
Sbjct: 482 PVL-TLAFSPNGKYLASAGEDQRLKLWDLASGGLFKDLRGHTDTISSLSFSQDSSLVASA 540
Query: 247 ALDNDRTMKIW 257
++DN T+++W
Sbjct: 541 SMDN--TVRVW 549
>ASPGD|ASPL0000014385 [details] [associations]
symbol:cpcB species:162425 "Emericella nidulans"
[GO:0034198 "cellular response to amino acid starvation"
evidence=IMP] [GO:0001965 "G-protein alpha-subunit binding"
evidence=IGI;ISS] [GO:0070798 "positive regulation of
cleistothecium development" evidence=IMP] [GO:0005622
"intracellular" evidence=IDA] [GO:0035690 "cellular response to
drug" evidence=IEP] [GO:0097308 "cellular response to farnesol"
evidence=IEP] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0005080 "protein kinase C binding" evidence=IEA] [GO:0070791
"cleistothecium development" evidence=IMP] [GO:0032995 "regulation
of fungal-type cell wall biogenesis" evidence=IEA] [GO:0031139
"positive regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0034613 "cellular protein localization"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032956 "regulation of actin cytoskeleton
organization" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001302
EMBL:AACD01000067 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
RefSeq:XP_661767.1 ProteinModelPortal:G5EB28 SMR:G5EB28
EnsemblFungi:CADANIAT00004509 GeneID:2873584 KEGG:ani:AN4163.2
Uniprot:G5EB28
Length = 316
Score = 152 (58.6 bits), Expect = 7.7e-10, Sum P(2) = 7.7e-10
Identities = 46/179 (25%), Positives = 89/179 (49%)
Query: 15 LTQTLNGHLRAVSYVKFSHDG-RLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGHE 73
L TL GH V+ + S + +L S S +KTL+ ++L+ P L+ GH
Sbjct: 7 LRGTLEGHNGWVTSLATSLENPNMLLSGSRDKTLIIWNLTRDEQAYGYPKRSLE---GHS 63
Query: 74 QGISDLA---------------TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSD 118
+SD ++RLW++ + + +T +GHTN V ++F+ + +IVS
Sbjct: 64 HIVSDCVISSDGAYALSASWDKSLRLWELSSGQTTRTFVGHTNDVLSVSFSADNRQIVSG 123
Query: 119 TFNETIRIWDIKTGKCLKVLP--AHSDPVTAIDF--NRDGTMIVTSSYDGLYRILDAST 173
+ + TI++W+ G C + H++ V+ + F N +IV++ +D L ++ + ++
Sbjct: 124 SRDRTIKLWNT-LGDCKYTITDKGHTEWVSCVRFSPNPQNPVIVSAGWDKLVKVWELAS 181
Score = 139 (54.0 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 46/166 (27%), Positives = 78/166 (46%)
Query: 17 QTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS---ISNFDSTPPSPLQ-KFTGH 72
++L GH VS S DG S+S +K+L + LSS F L F+
Sbjct: 57 RSLEGHSHIVSDCVISSDGAYALSASWDKSLRLWELSSGQTTRTFVGHTNDVLSVSFSAD 116
Query: 73 EQGI---SDLATIRLWDVPTATSLKTLI---GHTNYVFCINF--NPQSNRIVSDTFNETI 124
+ I S TI+LW+ T K I GHT +V C+ F NPQ+ IVS +++ +
Sbjct: 117 NRQIVSGSRDRTIKLWN--TLGDCKYTITDKGHTEWVSCVRFSPNPQNPVIVSAGWDKLV 174
Query: 125 RIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
++W++ + + H+ + + + DG++ + DG+ + D
Sbjct: 175 KVWELASCRLQTDHIGHTGYINTVTISPDGSLCASGGKDGVTMLWD 220
Score = 109 (43.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 38/158 (24%), Positives = 67/158 (42%)
Query: 16 TQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQ-----KFT 70
T+T GH V V FS D R + S S ++T+ ++ + T + +F+
Sbjct: 98 TRTFVGHTNDVLSVSFSADNRQIVSGSRDRTIKLWNTLGDCKYTITDKGHTEWVSCVRFS 157
Query: 71 GHEQGISDLAT-----IRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIR 125
+ Q ++ +++W++ + IGHT Y+ + +P + S +
Sbjct: 158 PNPQNPVIVSAGWDKLVKVWELASCRLQTDHIGHTGYINTVTISPDGSLCASGGKDGVTM 217
Query: 126 IWDIKTGKCLKVLPAHSDPVTAIDF--NRDGTMIVTSS 161
+WD+ K L L A D + A+ F NR TSS
Sbjct: 218 LWDLNESKHLYSLHA-GDEIHALVFSPNRYWLCAATSS 254
Score = 44 (20.5 bits), Expect = 7.7e-10, Sum P(2) = 7.7e-10
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 171 ASTPNGKFILVGTLDNTLRLWNYSTR 196
A + +G+ + G DN +R W +R
Sbjct: 290 AWSADGQTLFAGYTDNKIRAWGVMSR 315
Score = 37 (18.1 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 8/27 (29%), Positives = 12/27 (44%)
Query: 173 TPNGKFILVGTLDNTLRLWNYSTRKIL 199
+P+G G D LW+ + K L
Sbjct: 201 SPDGSLCASGGKDGVTMLWDLNESKHL 227
>TAIR|locus:2040731 [details] [associations]
symbol:AT2G37670 "AT2G37670" species:3702 "Arabidopsis
thaliana" [GO:0004871 "signal transducer activity" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007165 "signal transduction"
evidence=ISS] [GO:0048610 "cellular process involved in
reproduction" evidence=RCA] [GO:0048868 "pollen tube development"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AC004684 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 IPI:IPI00535445 PIR:T02533 RefSeq:NP_181303.1
UniGene:At.50121 ProteinModelPortal:O80935 SMR:O80935
EnsemblPlants:AT2G37670.1 GeneID:818344 KEGG:ath:AT2G37670
TAIR:At2g37670 HOGENOM:HOG000239143 InParanoid:O80935 OMA:GWIKVRQ
PhylomeDB:O80935 ProtClustDB:CLSN2683085 ArrayExpress:O80935
Genevestigator:O80935 Uniprot:O80935
Length = 903
Score = 153 (58.9 bits), Expect = 7.8e-10, Sum P(2) = 7.8e-10
Identities = 46/153 (30%), Positives = 74/153 (48%)
Query: 81 TIRLWDVPTATSLKTLIGHTNYVFCINFNP-QSNRIVSDTFNETIRIWDIKTGKCLKVLP 139
T+RLWD+ T T LK L H +YV CI F+P N +S + + IRIW I+ ++
Sbjct: 528 TVRLWDIETKTCLK-LFAHNDYVTCIQFSPVDENYFLSGSLDAKIRIWSIQDRHVVEWSD 586
Query: 140 AHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYSTRKIL 199
H + VTA + DG + S+ G+ R D T + K +D + + RKI
Sbjct: 587 LH-EMVTAACYTPDGQGALIGSHKGICRAYD--TEDCKLSQTNQIDVQSNKKSQAKRKIT 643
Query: 200 K-TYSGYTNSKYCISSTFS---VTNGKYIVSHR 228
+S S+ ++S S + +G ++ H+
Sbjct: 644 SFQFSPVNPSEVLVTSADSRIRILDGSEVI-HK 675
Score = 117 (46.2 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 26/75 (34%), Positives = 47/75 (62%)
Query: 95 TLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNR-D 153
+L GH + + ++++ +S ++S + ++T+R+WDI+T CLK+ AH+D VT I F+ D
Sbjct: 501 SLKGHLDAILDLSWS-KSQLLLSSSMDKTVRLWDIETKTCLKLF-AHNDYVTCIQFSPVD 558
Query: 154 GTMIVTSSYDGLYRI 168
++ S D RI
Sbjct: 559 ENYFLSGSLDAKIRI 573
Score = 58 (25.5 bits), Expect = 7.8e-10, Sum P(2) = 7.8e-10
Identities = 20/75 (26%), Positives = 33/75 (44%)
Query: 5 RSLESFRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYS-----LSSISNFD 59
+S + + Q + H AV +KFS D L S A++ + + L S++
Sbjct: 386 KSYKELSALHMCQEIQAHEGAVWTIKFSQDAHYLASGGADRVIHVWEVQECELMSMNEGS 445
Query: 60 STPPSP-LQKFTGHE 73
TP P L +G+E
Sbjct: 446 LTPIHPSLCDSSGNE 460
Score = 49 (22.3 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 169 LDAS-TPNGKFILVGTLDNTLRLWN---YSTRKILKTYS 203
L AS + +GK+I+ + D+ + LW + TR L T S
Sbjct: 686 LSASYSQDGKYIICASEDSQVYLWKNDFHRTRSTLTTQS 724
>TAIR|locus:2202129 [details] [associations]
symbol:AT1G11160 "AT1G11160" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0080008 GO:GO:0008352 PANTHER:PTHR19845 IPI:IPI00528177
RefSeq:NP_172582.2 UniGene:At.43445 ProteinModelPortal:F4I7E1
SMR:F4I7E1 PRIDE:F4I7E1 EnsemblPlants:AT1G11160.1 GeneID:837657
KEGG:ath:AT1G11160 OMA:DETHATQ Uniprot:F4I7E1
Length = 1021
Score = 162 (62.1 bits), Expect = 8.0e-10, Sum P(2) = 8.0e-10
Identities = 48/188 (25%), Positives = 80/188 (42%)
Query: 6 SLESFRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSI---------- 55
+L S T +L GH V V F+ + L+ + ++ + + L
Sbjct: 41 NLWSIGKTTSPMSLCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHR 100
Query: 56 SNFDSTPPSPLQKFTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRI 115
SN + P +F G SD +R+WD ++T GHT + I F+P +
Sbjct: 101 SNCSAVEFHPFGEFLA--SGSSD-TNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWV 157
Query: 116 VSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPN 175
VS + +++WD+ GK L H P+ ++DF+ ++ T S D + D T
Sbjct: 158 VSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWDLET-- 215
Query: 176 GKFILVGT 183
F L+GT
Sbjct: 216 --FELIGT 221
Score = 156 (60.0 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 43/182 (23%), Positives = 81/182 (44%)
Query: 82 IRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAH 141
+ LW + TS +L GHT+ V + FN + +++ + I++WD++ K ++ H
Sbjct: 40 VNLWSIGKTTSPMSLCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGH 99
Query: 142 SDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYSTRKILKT 201
+A++F+ G + + S D R+ D + G + +S
Sbjct: 100 RSNCSAVEFHPFGEFLASGSSDTNLRVWD-TRKKGCIQTYKGHTRGISTIEFSPDGRWVV 158
Query: 202 YSGYTNSKYCISSTFSVTNGKYIVS---HRDPVISVASHPAKNIIASGALDNDRTMKIWT 258
G N + + +T GK + H P+ S+ HP + ++A+G+ D RT+K W
Sbjct: 159 SGGLDN----VVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSAD--RTVKFWD 212
Query: 259 QE 260
E
Sbjct: 213 LE 214
Score = 48 (22.0 bits), Expect = 8.0e-10, Sum P(2) = 8.0e-10
Identities = 15/46 (32%), Positives = 21/46 (45%)
Query: 176 GKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKY-CISSTFSVTN 220
GKFI N++ +W S L+ Y + K C+ FSV N
Sbjct: 278 GKFIGCSYYRNSVGIW-VSDISELEPYGAVSEDKNECMVKRFSVLN 322
>FB|FBgn0263933 [details] [associations]
symbol:ebi "ebi" species:7227 "Drosophila melanogaster"
[GO:0042058 "regulation of epidermal growth factor receptor
signaling pathway" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005525 "GTP binding" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0051726 "regulation of cell
cycle" evidence=IMP] [GO:0007173 "epidermal growth factor receptor
signaling pathway" evidence=TAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0042676 "compound eye cone cell fate
commitment" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0017053 "transcriptional repressor complex"
evidence=IGI;IPI] [GO:0042461 "photoreceptor cell development"
evidence=IMP] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0031065 "positive regulation of histone deacetylation"
evidence=IDA] [GO:0070491 "repressing transcription factor binding"
evidence=IPI] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IPI] [GO:0035220 "wing disc
development" evidence=IGI;IMP] [GO:0045747 "positive regulation of
Notch signaling pathway" evidence=IGI;IDA] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0045572 "positive regulation of
imaginal disc growth" evidence=IGI;IMP] [GO:0022416 "chaeta
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005525 GO:GO:0017053 GO:GO:0007173 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007601 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030162 GO:GO:0007219 GO:GO:0045747
GO:GO:0003682 GO:GO:0000122 GO:GO:0022416 GO:GO:0035220
GO:GO:0007049 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045572
GO:GO:0005700 GO:GO:0042461 GO:GO:0042058 GO:GO:0031065
GO:GO:0042676 EMBL:AF146345 EMBL:AY061326 RefSeq:NP_477329.1
UniGene:Dm.3639 ProteinModelPortal:Q95RJ9 SMR:Q95RJ9 IntAct:Q95RJ9
MINT:MINT-6540401 STRING:Q95RJ9 PaxDb:Q95RJ9
EnsemblMetazoa:FBtr0078055 GeneID:33212 KEGG:dme:Dmel_CG4063
CTD:33212 FlyBase:FBgn0263933 GeneTree:ENSGT00690000102024
InParanoid:Q95RJ9 KO:K04508 OMA:NRDRCCH OrthoDB:EOG4SF7NC
PhylomeDB:Q95RJ9 GenomeRNAi:33212 NextBio:782461 Bgee:Q95RJ9
GermOnline:CG4063 Uniprot:Q95RJ9
Length = 700
Score = 153 (58.9 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 43/170 (25%), Positives = 77/170 (45%)
Query: 17 QTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLS-------------SISNFDSTPP 63
+T GH V+ +K+ G+LL S S + TL +S++ I +P
Sbjct: 528 KTFKGHTNEVNAIKWCPQGQLLASCSDDMTLKIWSMNRDRCCHDLQAHSKEIYTIKWSPT 587
Query: 64 SPLQKFTGHEQGISDLA---TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTF 120
P ++ + T+RLWDV + + TL HT V+ + F+P + S +F
Sbjct: 588 GPGTNNPNTNLILASASFDSTVRLWDVERGSCIHTLTKHTEPVYSVAFSPDGKHLASGSF 647
Query: 121 NETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
++ + IW +TG+ + + + + +N GT + S+ DG +LD
Sbjct: 648 DKCVHIWSTQTGQLVHSYKG-TGGIFEVCWNSKGTKVGASASDGSVFVLD 696
Score = 149 (57.5 bits), Expect = 8.0e-10, Sum P(2) = 8.0e-10
Identities = 55/221 (24%), Positives = 95/221 (42%)
Query: 15 LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSIS-----NFDSTPPSPLQKF 69
L TL H + +K++ G + S+ +KT + + S+ F S P +
Sbjct: 443 LASTLGQHKGPIFALKWNKCGNYILSAGVDKTTIIWDASTGQCTQQFAFHSAPALDVDWQ 502
Query: 70 TGHEQGISDLAT---IRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRI 126
T Q + +T I + + +KT GHTN V I + PQ + S + + T++I
Sbjct: 503 TN--QAFASCSTDQRIHVCRLGVNEPIKTFKGHTNEVNAIKWCPQGQLLASCSDDMTLKI 560
Query: 127 WDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVG-TLD 185
W + +C L AHS + I ++ G + PN IL + D
Sbjct: 561 WSMNRDRCCHDLQAHSKEIYTIKWSPTGP--------------GTNNPNTNLILASASFD 606
Query: 186 NTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVS 226
+T+RLW+ + T + +T Y ++ FS +GK++ S
Sbjct: 607 STVRLWDVERGSCIHTLTKHTEPVYSVA--FS-PDGKHLAS 644
Score = 147 (56.8 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 32/112 (28%), Positives = 59/112 (52%)
Query: 77 SDLATIRLWDVPTATSLKTLIGHTNYVFCINF--------NPQSNRIV-SDTFNETIRIW 127
SD T+++W + L H+ ++ I + NP +N I+ S +F+ T+R+W
Sbjct: 553 SDDMTLKIWSMNRDRCCHDLQAHSKEIYTIKWSPTGPGTNNPNTNLILASASFDSTVRLW 612
Query: 128 DIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFI 179
D++ G C+ L H++PV ++ F+ DG + + S+D I ST G+ +
Sbjct: 613 DVERGSCIHTLTKHTEPVYSVAFSPDGKHLASGSFDKCVHIW--STQTGQLV 662
Score = 118 (46.6 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 30/97 (30%), Positives = 53/97 (54%)
Query: 86 DVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGK----------CL 135
++P + + + L GH + VF +NP + + S + + T RIWD+ C+
Sbjct: 342 EIPESKA-RVLRGHESEVFICAWNPSRDLLASGSGDSTARIWDMSDANTNSNQLVLRHCI 400
Query: 136 KV----LPAHSDPVTAIDFNRDGTMIVTSSYDGLYRI 168
+ +P++ D VT++D+N DG+++ T SYDG RI
Sbjct: 401 QKGGAEVPSNKD-VTSLDWNCDGSLLATGSYDGYARI 436
Score = 60 (26.2 bits), Expect = 8.0e-10, Sum P(2) = 8.0e-10
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 224 IVSHRDPVISVASHPAKNIIASGALDNDRTMKIWTQE 260
+ H +PV SVA P +ASG+ D + + IW+ +
Sbjct: 623 LTKHTEPVYSVAFSPDGKHLASGSFD--KCVHIWSTQ 657
>MGI|MGI:1915086 [details] [associations]
symbol:Wdr83 "WD repeat domain containing 83" species:10090
"Mus musculus" [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1915086 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 GO:GO:0000375
GeneTree:ENSGT00700000104496 HOGENOM:HOG000091642 CTD:84292
HOVERGEN:HBG105288 KO:K13124 OrthoDB:EOG4ZCT4V OMA:CKQGAVR
EMBL:AY365434 EMBL:AK005790 EMBL:AK020654 EMBL:BC005587
EMBL:BC019369 EMBL:BC094624 IPI:IPI00118714 IPI:IPI00407931
IPI:IPI00624217 RefSeq:NP_080675.2 UniGene:Mm.334680
ProteinModelPortal:Q9DAJ4 SMR:Q9DAJ4 STRING:Q9DAJ4
PhosphoSite:Q9DAJ4 PRIDE:Q9DAJ4 Ensembl:ENSMUST00000093357
Ensembl:ENSMUST00000149050 GeneID:67836 KEGG:mmu:67836
UCSC:uc009mph.1 InParanoid:Q9DAJ4 NextBio:325661 Bgee:Q9DAJ4
CleanEx:MM_1500041N16RIK Genevestigator:Q9DAJ4
GermOnline:ENSMUSG00000005150 Uniprot:Q9DAJ4
Length = 315
Score = 123 (48.4 bits), Expect = 9.8e-10, Sum P(2) = 9.8e-10
Identities = 25/90 (27%), Positives = 47/90 (52%)
Query: 81 TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPA 140
T++LW+ T L+T GH V + ++ + S ++T+ +WD+ TG+ ++
Sbjct: 48 TLKLWNPLRGTLLRTYSGHGYEVLDAAGSFDNSHLCSGGGDKTVVLWDVATGQVVRKFRG 107
Query: 141 HSDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
H+ V + FN + T+I++ S D R D
Sbjct: 108 HAGKVNTVQFNEEATVILSGSIDSSVRCWD 137
Score = 117 (46.2 bits), Expect = 5.3e-09, Sum P(2) = 5.3e-09
Identities = 43/158 (27%), Positives = 68/158 (43%)
Query: 12 PYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYS------LSSISNFDSTPPSP 65
P +TL+ AV V+F+ DG + ++KTL ++ L + S
Sbjct: 14 PQKRMKTLDCSQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDA 73
Query: 66 LQKFTGHE--QGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNET 123
F G D T+ LWDV T ++ GH V + FN ++ I+S + + +
Sbjct: 74 AGSFDNSHLCSGGGD-KTVVLWDVATGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSS 132
Query: 124 IRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSS 161
+R WD ++ K P +PV +D RDG V S
Sbjct: 133 VRCWDCRSRK-----P---EPVQTLDEARDGISSVKVS 162
Score = 79 (32.9 bits), Expect = 9.8e-10, Sum P(2) = 9.8e-10
Identities = 21/69 (30%), Positives = 37/69 (53%)
Query: 158 VTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFS 217
V+S Y G + +G+ L+ +LD+TLRL + T ++L Y G+ N +Y + S
Sbjct: 185 VSSDYVGSPITCTCFSRDGQCTLISSLDSTLRLLDKDTGELLGEYVGHKNQQYKLDCCLS 244
Query: 218 VTNGKYIVS 226
+ ++VS
Sbjct: 245 ERD-THVVS 252
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 150 (57.9 bits), Expect = 9.8e-10, P = 9.8e-10
Identities = 37/156 (23%), Positives = 69/156 (44%)
Query: 18 TLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSI----------SNFDSTPPSPLQ 67
+L GH V V+ + L+ + S ++ + L + +N S P
Sbjct: 58 SLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYG 117
Query: 68 KFTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIW 127
+F G D I+LWD+ + GH+ V C+ F+P + S + T+++W
Sbjct: 118 EFVA--SGSQD-TNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLW 174
Query: 128 DIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYD 163
D+ GK + P H+ PV ++F+ + ++ + S D
Sbjct: 175 DLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSD 210
Score = 147 (56.8 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 45/176 (25%), Positives = 78/176 (44%)
Query: 78 DLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKV 137
D + LW + + +L GHT+ V + N IV+ + + +IR+WD++ K L+
Sbjct: 41 DDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRT 100
Query: 138 LPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYSTR- 196
L H + ++DF+ G + + S D ++ D F G +R +S
Sbjct: 101 LMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGH-SQAVRCLRFSPDG 159
Query: 197 KILKTYSGYTNSKYCISSTFSVTNGKYIVS---HRDPVISVASHPAKNIIASGALD 249
K L + + K + +T GK + H PV V HP + ++ASG+ D
Sbjct: 160 KWLASAADDHTVKL-----WDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSD 210
Score = 145 (56.1 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 43/171 (25%), Positives = 80/171 (46%)
Query: 17 QTLNGHLRAVSYVKFSH-DGRLLTSSSAEKTLLTYSLSS----ISNFDSTPPSPLQKFTG 71
Q + H VS + GRLL + + + +S++ +S T P +
Sbjct: 14 QEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNT 73
Query: 72 HEQGI---SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWD 128
E+ I S +IR+WD+ A L+TL+GH + ++F+P + S + + I++WD
Sbjct: 74 PEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWD 133
Query: 129 IKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFI 179
I+ C+ HS V + F+ DG + +++ D ++ D + GK +
Sbjct: 134 IRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTA--GKMM 182
Score = 113 (44.8 bits), Expect = 0.00014, P = 0.00014
Identities = 41/171 (23%), Positives = 71/171 (41%)
Query: 89 TATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNET-IRIWDIKTGKCLKVLPAHSDPVTA 147
TA L+ ++ H + V + S R+++ ++ + +W I C+ L H+ PV +
Sbjct: 9 TAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVES 68
Query: 148 IDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTN 207
+ N +IV S G R+ D L+G N L + + + + S TN
Sbjct: 69 VRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTN 128
Query: 208 SK-YCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDNDRTMKIW 257
K + I V + H V + P +AS A +D T+K+W
Sbjct: 129 IKLWDIRRKGCVFRYR---GHSQAVRCLRFSPDGKWLASAA--DDHTVKLW 174
>TAIR|locus:2148965 [details] [associations]
symbol:TOZ "AT5G16750" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA;IMP]
[GO:0009880 "embryonic pattern specification" evidence=RCA;IMP]
[GO:0051301 "cell division" evidence=RCA;IMP] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010182 "sugar mediated signaling
pathway" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048366
"leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GO:GO:0005730 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0009880 GO:GO:0006364
HSSP:P16649 GO:GO:0032040 EMBL:AL391147 HOGENOM:HOG000188765
KO:K14555 OMA:ADSKLIR IPI:IPI00523827 PIR:T51507 RefSeq:NP_568338.2
UniGene:At.24110 ProteinModelPortal:Q9LFE2 SMR:Q9LFE2 STRING:Q9LFE2
PRIDE:Q9LFE2 EnsemblPlants:AT5G16750.1 GeneID:831538
KEGG:ath:AT5G16750 TAIR:At5g16750 InParanoid:Q9LFE2
PhylomeDB:Q9LFE2 ProtClustDB:CLSN2680022 Genevestigator:Q9LFE2
Uniprot:Q9LFE2
Length = 876
Score = 154 (59.3 bits), Expect = 7.5e-09, Sum P(2) = 7.5e-09
Identities = 29/97 (29%), Positives = 50/97 (51%)
Query: 77 SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLK 136
S+ T +W +P + TL GH +F + F+ +++ + ++T++IW I G CLK
Sbjct: 518 SEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLK 577
Query: 137 VLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDAST 173
H+ V F DGT V+ DGL ++ + +T
Sbjct: 578 TFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNT 614
Score = 141 (54.7 bits), Expect = 9.9e-10, Sum P(2) = 9.9e-10
Identities = 42/171 (24%), Positives = 76/171 (44%)
Query: 14 TLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTP--PSPLQKFTG 71
++ T+ G ++ + S D +LL S+ + + + L ++ S P+
Sbjct: 51 SVKSTIEGESDTLTALALSPDDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMAC 110
Query: 72 HEQGISDLAT------IRLWDVPTATSLKTLIGHTNYVFCINFNPQSNR--IVSDTFNET 123
H G LAT + +WDV GH V I F+P SN+ ++S + + T
Sbjct: 111 HASG-GLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNILISGSDDAT 169
Query: 124 IRIWDIKTG----KCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
+R+WD+ KCL ++ H VT+I + DG + ++ D + + D
Sbjct: 170 VRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVNLWD 220
Score = 131 (51.2 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 26/97 (26%), Positives = 47/97 (48%)
Query: 81 TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPA 140
T+++W + + LKT GHT+ V +F + VS + +++W++ T +C+
Sbjct: 564 TVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSECIATYDQ 623
Query: 141 HSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGK 177
H D V A+ + MI T D + + ST + K
Sbjct: 624 HEDKVWALAVGKKTEMIATGGGDAVINLWHDSTASDK 660
Score = 105 (42.0 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 31/139 (22%), Positives = 60/139 (43%)
Query: 39 TSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGHEQGISDLATIRLWDVPTATSLKTLIG 98
T SS + T+ S +++ +P L GH + IR+WD+ T +++ G
Sbjct: 48 TDSSVKSTIEGES-DTLTALALSPDDKLLFSAGHSR------QIRVWDLETLKCIRSWKG 100
Query: 99 HTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGT--M 156
H V + + + + + + +WD+ G C H V++I F+ D +
Sbjct: 101 HEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNI 160
Query: 157 IVTSSYDGLYRILDASTPN 175
+++ S D R+ D + N
Sbjct: 161 LISGSDDATVRVWDLNAKN 179
Score = 99 (39.9 bits), Expect = 8.9e-06, Sum P(3) = 8.9e-06
Identities = 28/109 (25%), Positives = 54/109 (49%)
Query: 68 KFTGHEQGISDLAT----IRLWDVPTATSLKTLIGHTNYVFCINFNPQSNR---IVSDTF 120
KF G E+ +AT +R++DV T + L GH V ++ S+ IV+ +
Sbjct: 365 KFLGDEEQFLAVATNLEEVRVYDVATMSCSYVLAGHKEVVLSLDTCVSSSGNVLIVTGSK 424
Query: 121 NETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDG-TMIVTSSYDGLYRI 168
++T+R+W+ + C+ V H+ + A+ F + + V+ S D ++
Sbjct: 425 DKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKV 473
Score = 71 (30.1 bits), Expect = 9.9e-10, Sum P(2) = 9.9e-10
Identities = 21/80 (26%), Positives = 41/80 (51%)
Query: 179 ILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVS-HRDPVISVASH 237
++ + D T+++W S LKT+ G+T+S + ++F +T+G VS D ++ + +
Sbjct: 556 VMTASGDKTVKIWAISDGSCLKTFEGHTSS--VLRASF-ITDGTQFVSCGADGLLKLWNV 612
Query: 238 PAKNIIASGALDNDRTMKIW 257
IA+ D K+W
Sbjct: 613 NTSECIATYDQHED---KVW 629
Score = 59 (25.8 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 13/55 (23%), Positives = 28/55 (50%)
Query: 172 STPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVS 226
S+ I+ G+ D T+RLWN +++ + +G+ ++ F+ + + VS
Sbjct: 412 SSSGNVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVA--FAKKSFSFFVS 464
Score = 48 (22.0 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 23/80 (28%), Positives = 36/80 (45%)
Query: 178 FILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASH 237
F + G+ D TL++W S I + N K T SV + +H + SVA
Sbjct: 461 FFVSGSGDRTLKVW--SLDGISEDSEEPINLK-----TRSV-----VAAHDKDINSVAVA 508
Query: 238 PAKNIIASGALDNDRTMKIW 257
+++ +G+ DRT IW
Sbjct: 509 RNDSLVCTGS--EDRTASIW 526
Score = 47 (21.6 bits), Expect = 7.5e-09, Sum P(2) = 7.5e-09
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 22 HLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSIS 56
H AV+ + S DG L S+ +K + + L S
Sbjct: 191 HFSAVTSIALSEDGLTLFSAGRDKVVNLWDLHDYS 225
>POMBASE|SPAC630.14c [details] [associations]
symbol:tup12 "transcriptional corepressor Tup12"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043156 "chromatin remodeling in response to cation stress"
evidence=IMP] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] [GO:0071473 "cellular response to cation stress"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC630.14c InterPro:IPR001632 GO:GO:0005829
GO:GO:0003714 GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 PRINTS:PR00319 HOGENOM:HOG000200558
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:U92792 PIR:T38992 RefSeq:NP_592910.2 ProteinModelPortal:Q9UUG8
STRING:Q9UUG8 EnsemblFungi:SPAC630.14c.1 GeneID:2543402
NextBio:20804417 GO:GO:0043156 Uniprot:Q9UUG8
Length = 598
Score = 165 (63.1 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 69/274 (25%), Positives = 120/274 (43%)
Query: 15 LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLL----TYSLSSISNFDSTPP------- 63
L TL H + YV+FS DG+ L + ++ T L ++ +S+
Sbjct: 292 LLHTLE-HTSVICYVRFSADGKFLATGCNRAAMVFNVETGKLITLLQEESSKREGDLYVR 350
Query: 64 ----SPLQKFTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDT 119
SP K+ G+ D IR+WD+ + L GH ++ ++F+ +VS +
Sbjct: 351 SVAFSPDGKYLA--TGVED-QQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGS 407
Query: 120 FNETIRIWDIKTGKCLKVLPAHSDP-VTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKF 178
+ T+ +WD++ G+ +L H+D VT + F+ DG I S D + RI T +G
Sbjct: 408 GDRTVCLWDVEAGEQKLIL--HTDDGVTTVMFSPDGQFIAAGSLDKVIRIW---TSSGTL 462
Query: 179 I--LVGTLDNTLRLWNYSTRKILKTYSGYTNSKY----CISS---TFSVTNG---KYIVS 226
+ L G ++ + K L + S K C+S+ + G +
Sbjct: 463 VEQLHGHEESVYSVAFSPDGKYLVSGSLDNTIKLWELQCVSNVAPSMYKEGGICKQTFTG 522
Query: 227 HRDPVISVASHPAKNIIASGALDNDRTMKIWTQE 260
H+D ++SV P I SG+ DRT++ W+ +
Sbjct: 523 HKDFILSVTVSPDGKWIISGS--KDRTIQFWSPD 554
Score = 152 (58.6 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 50/199 (25%), Positives = 94/199 (47%)
Query: 19 LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS-----ISNFDSTPPSPLQKFTGHE 73
L GH + + + FS DG+ L S S ++T+ + + + I + D + + G
Sbjct: 384 LTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVEAGEQKLILHTDDGVTTVMFSPDGQF 443
Query: 74 QGISDL-ATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTG 132
L IR+W + T ++ L GH V+ + F+P +VS + + TI++W+++
Sbjct: 444 IAAGSLDKVIRIW-TSSGTLVEQLHGHEESVYSVAFSPDGKYLVSGSLDNTIKLWELQ-- 500
Query: 133 KCLK-VLPAHSDPVTAIDFNRDGTMIVTSSYDGLYR-ILDAS-TPNGKFILVGTLDNTLR 189
C+ V P+ + G I ++ G IL + +P+GK+I+ G+ D T++
Sbjct: 501 -CVSNVAPSM--------YKEGG--ICKQTFTGHKDFILSVTVSPDGKWIISGSKDRTIQ 549
Query: 190 LWNYSTRKILKTYSGYTNS 208
W+ + T G+ NS
Sbjct: 550 FWSPDSPHSQLTLQGHNNS 568
Score = 115 (45.5 bits), Expect = 0.00067, P = 0.00067
Identities = 51/193 (26%), Positives = 84/193 (43%)
Query: 81 TIRLWDVPTATSLKTLIGHTNY-VFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLP 139
T+ LWDV + LI HT+ V + F+P I + + ++ IRIW +G ++ L
Sbjct: 411 TVCLWDVEAGE--QKLILHTDDGVTTVMFSPDGQFIAAGSLDKVIRIWT-SSGTLVEQLH 467
Query: 140 AHSDPVTAIDFNRDGTMIVTSSYDGLYRILDAS-----TPN----G---KFILVGTLDNT 187
H + V ++ F+ DG +V+ S D ++ + P+ G K G D
Sbjct: 468 GHEESVYSVAFSPDGKYLVSGSLDNTIKLWELQCVSNVAPSMYKEGGICKQTFTGHKDFI 527
Query: 188 LRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGA 247
L + K + SG + S S + + H + VISVA P + A+G+
Sbjct: 528 LSVTVSPDGKWI--ISGSKDRTIQFWSPDSPHSQLTLQGHNNSVISVAVSPNGHCFATGS 585
Query: 248 LDNDRTMKIWTQE 260
D +IW+ E
Sbjct: 586 --GDLRARIWSYE 596
>UNIPROTKB|F1MNS4 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9913
"Bos taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 IPI:IPI00711976 UniGene:Bt.20483 OMA:HHFRGSP
GeneTree:ENSGT00690000102183 EMBL:DAAA02057306
ProteinModelPortal:F1MNS4 Ensembl:ENSBTAT00000027147 Uniprot:F1MNS4
Length = 800
Score = 146 (56.5 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 35/131 (26%), Positives = 67/131 (51%)
Query: 81 TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPA 140
T +LW +P L T GH ++C+ F+P + + + + TI++W ++ CLK
Sbjct: 502 TAKLWALPRCQLLGTFSGHRRGLWCVQFSPMDQVLATASADGTIKLWALQDFSCLKTFEG 561
Query: 141 HSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLD-NTLRLWN-YSTRKI 198
H V + F GT +++S DGL ++ + N + V TLD + ++W + +R
Sbjct: 562 HDASVLKVAFVSRGTQLLSSGSDGLLKLW--TIKNNE--CVRTLDAHEDKVWGLHCSRLD 617
Query: 199 LKTYSGYTNSK 209
+ +G ++S+
Sbjct: 618 DRALTGASDSR 628
Score = 126 (49.4 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09
Identities = 28/91 (30%), Positives = 46/91 (50%)
Query: 82 IRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIV--SDTFNETIRIWDIKTGKCLKVLP 139
+R+WDV G V + F+P R++ S + +IR+W ++ CL VL
Sbjct: 133 VRVWDVVRCYGTHHFRGSPGVVHLVAFHPDPARLLLFSSAADTSIRVWSLQERSCLAVLT 192
Query: 140 AHSDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
AH VT++ F+ DG +++S D + I D
Sbjct: 193 AHYSAVTSLTFSADGHTMLSSGRDKICVIWD 223
Score = 108 (43.1 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 42/159 (26%), Positives = 74/159 (46%)
Query: 17 QTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSI---SNFDSTPPSPLQ-KFTGH 72
Q L G R +++ +H LL S +A+ LL Y S+ F L +F G
Sbjct: 286 QRLRGPGRELTHCTLAHAAGLLLSVTADHNLLLYDAHSLRLRKQFAGYSEEVLDVRFLGP 345
Query: 73 EQG----ISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWD 128
E S+ ++++D+ T+ + + L GHT+ V ++ + S +++IR+W
Sbjct: 346 EDSHVVVASNSPCLKVFDLQTS-ACQILHGHTDIVLALDVFRKGRLFASCAKDQSIRVWR 404
Query: 129 I-KTGK--CLKVLPAHSDPVTAIDFNR-DGTMIVTSSYD 163
+ K+G+ C+ H+ V I +R T +VT S D
Sbjct: 405 MNKSGEVACVAQGSGHTHSVGTICCSRLKETFLVTGSQD 443
Score = 95 (38.5 bits), Expect = 4.9e-08, Sum P(3) = 4.9e-08
Identities = 21/86 (24%), Positives = 45/86 (52%)
Query: 84 LWDVPTATSLKTLIGHTNYVFCINF-NPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHS 142
L+D + K G++ V + F P+ + +V + + ++++D++T C ++L H+
Sbjct: 318 LYDAHSLRLRKQFAGYSEEVLDVRFLGPEDSHVVVASNSPCLKVFDLQTSAC-QILHGHT 376
Query: 143 DPVTAIDFNRDGTMIVTSSYDGLYRI 168
D V A+D R G + + + D R+
Sbjct: 377 DIVLALDVFRKGRLFASCAKDQSIRV 402
Score = 80 (33.2 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 171 ASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCI 212
A PN K + G+ D T +LW ++L T+SG+ +C+
Sbjct: 486 AVAPNDKLLATGSQDRTAKLWALPRCQLLGTFSGHRRGLWCV 527
Score = 65 (27.9 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 21/80 (26%), Positives = 37/80 (46%)
Query: 178 FILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASH 237
F++ G+ D T++LW +L +G+ + + T H + SVA
Sbjct: 436 FLVTGSQDCTVKLWPLP-EALLSKGTGHEGGPVFLQA--QATQR----CHDKDINSVAVA 488
Query: 238 PAKNIIASGALDNDRTMKIW 257
P ++A+G+ DRT K+W
Sbjct: 489 PNDKLLATGS--QDRTAKLW 506
Score = 64 (27.6 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 17/63 (26%), Positives = 30/63 (47%)
Query: 2 SSDRSLE--SFRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFD 59
++D S+ S + + L H AV+ + FS DG + SS +K + + L S+
Sbjct: 172 AADTSIRVWSLQERSCLAVLTAHYSAVTSLTFSADGHTMLSSGRDKICVIWDLRSLQATR 231
Query: 60 STP 62
+ P
Sbjct: 232 TVP 234
Score = 42 (19.8 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 13/57 (22%), Positives = 28/57 (49%)
Query: 179 ILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTF-SVTNGKYIVSHRDPVISV 234
+L T D+ L L++ + ++ K ++GY S+ + F + +V+ P + V
Sbjct: 307 LLSVTADHNLLLYDAHSLRLRKQFAGY--SEEVLDVRFLGPEDSHVVVASNSPCLKV 361
>UNIPROTKB|Q2KJJ5 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9913
"Bos taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 GO:GO:0032040 HSSP:P63005 EMBL:BC105313
IPI:IPI00711976 RefSeq:NP_001040084.2 UniGene:Bt.20483
ProteinModelPortal:Q2KJJ5 STRING:Q2KJJ5 PRIDE:Q2KJJ5 GeneID:618429
KEGG:bta:618429 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
InParanoid:Q2KJJ5 KO:K14555 OrthoDB:EOG42JNQR NextBio:20901180
Uniprot:Q2KJJ5
Length = 800
Score = 146 (56.5 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 35/131 (26%), Positives = 67/131 (51%)
Query: 81 TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPA 140
T +LW +P L T GH ++C+ F+P + + + + TI++W ++ CLK
Sbjct: 502 TAKLWALPRCQLLGTFSGHRRGLWCVQFSPMDQVLATASADGTIKLWALQDFSCLKTFEG 561
Query: 141 HSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLD-NTLRLWN-YSTRKI 198
H V + F GT +++S DGL ++ + N + V TLD + ++W + +R
Sbjct: 562 HDASVLKVAFVSRGTQLLSSGSDGLLKLW--TIKNNE--CVRTLDAHEDKVWGLHCSRLD 617
Query: 199 LKTYSGYTNSK 209
+ +G ++S+
Sbjct: 618 DRALTGASDSR 628
Score = 126 (49.4 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09
Identities = 28/91 (30%), Positives = 46/91 (50%)
Query: 82 IRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIV--SDTFNETIRIWDIKTGKCLKVLP 139
+R+WDV G V + F+P R++ S + +IR+W ++ CL VL
Sbjct: 133 VRVWDVVRCYGTHHFRGSPGVVHLVAFHPDPARLLLFSSAADTSIRVWSLQERSCLAVLT 192
Query: 140 AHSDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
AH VT++ F+ DG +++S D + I D
Sbjct: 193 AHYSAVTSLTFSADGHTMLSSGRDKICVIWD 223
Score = 108 (43.1 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 42/159 (26%), Positives = 74/159 (46%)
Query: 17 QTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSI---SNFDSTPPSPLQ-KFTGH 72
Q L G R +++ +H LL S +A+ LL Y S+ F L +F G
Sbjct: 286 QRLRGPGRELTHCTLAHAAGLLLSVTADHNLLLYDARSLRLRKQFAGYSEEVLDVRFLGP 345
Query: 73 EQG----ISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWD 128
E S+ ++++D+ T+ + + L GHT+ V ++ + S +++IR+W
Sbjct: 346 EDSHVVVASNSPCLKVFDLQTS-ACQILHGHTDIVLALDVFRKGRLFASCAKDQSIRVWR 404
Query: 129 I-KTGK--CLKVLPAHSDPVTAIDFNR-DGTMIVTSSYD 163
+ K+G+ C+ H+ V I +R T +VT S D
Sbjct: 405 MNKSGEVACVAQGSGHTHSVGTICCSRLKETFLVTGSQD 443
Score = 95 (38.5 bits), Expect = 4.9e-08, Sum P(3) = 4.9e-08
Identities = 21/86 (24%), Positives = 45/86 (52%)
Query: 84 LWDVPTATSLKTLIGHTNYVFCINF-NPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHS 142
L+D + K G++ V + F P+ + +V + + ++++D++T C ++L H+
Sbjct: 318 LYDARSLRLRKQFAGYSEEVLDVRFLGPEDSHVVVASNSPCLKVFDLQTSAC-QILHGHT 376
Query: 143 DPVTAIDFNRDGTMIVTSSYDGLYRI 168
D V A+D R G + + + D R+
Sbjct: 377 DIVLALDVFRKGRLFASCAKDQSIRV 402
Score = 80 (33.2 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 171 ASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCI 212
A PN K + G+ D T +LW ++L T+SG+ +C+
Sbjct: 486 AVAPNDKLLATGSQDRTAKLWALPRCQLLGTFSGHRRGLWCV 527
Score = 65 (27.9 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 21/80 (26%), Positives = 37/80 (46%)
Query: 178 FILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASH 237
F++ G+ D T++LW +L +G+ + + T H + SVA
Sbjct: 436 FLVTGSQDCTVKLWPLP-EALLSKGTGHEGGPVFLQA--QATQH----CHDKDINSVAVA 488
Query: 238 PAKNIIASGALDNDRTMKIW 257
P ++A+G+ DRT K+W
Sbjct: 489 PNDKLLATGS--QDRTAKLW 506
Score = 64 (27.6 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 17/63 (26%), Positives = 30/63 (47%)
Query: 2 SSDRSLE--SFRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFD 59
++D S+ S + + L H AV+ + FS DG + SS +K + + L S+
Sbjct: 172 AADTSIRVWSLQERSCLAVLTAHYSAVTSLTFSADGHTMLSSGRDKICVIWDLRSLQATR 231
Query: 60 STP 62
+ P
Sbjct: 232 TVP 234
Score = 42 (19.8 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 13/57 (22%), Positives = 28/57 (49%)
Query: 179 ILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTF-SVTNGKYIVSHRDPVISV 234
+L T D+ L L++ + ++ K ++GY S+ + F + +V+ P + V
Sbjct: 307 LLSVTADHNLLLYDARSLRLRKQFAGY--SEEVLDVRFLGPEDSHVVVASNSPCLKV 361
>UNIPROTKB|F1NEH1 [details] [associations]
symbol:TRAF7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0000185 "activation of
MAPKKK activity" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IEA] [GO:0043410 "positive regulation of MAPK cascade"
evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR008974 InterPro:IPR013323 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089 PROSITE:PS50145
PROSITE:PS50294 SMART:SM00184 SMART:SM00320 Pfam:PF00097
Prosite:PS00518 GO:GO:0043231 GO:GO:0005886 GO:GO:0006915
GO:GO:0042981 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0043410 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 InterPro:IPR017907 SUPFAM:SSF49599
Gene3D:3.90.890.10 GeneTree:ENSGT00690000101849 GO:GO:0000185
OMA:ALCIQGN EMBL:AADN02023658 EMBL:AADN02023655 EMBL:AADN02023656
EMBL:AADN02023657 IPI:IPI00600547 Ensembl:ENSGALT00000009263
ArrayExpress:F1NEH1 Uniprot:F1NEH1
Length = 670
Score = 165 (63.1 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 67/266 (25%), Positives = 123/266 (46%)
Query: 2 SSDRSL---ESFRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNF 58
SSD+++ ++ Y +TL GH V + G L S SA+ T++ + + ++
Sbjct: 415 SSDKTIKVWDTCTTYKCQKTLEGHDGIV--LALCIQGNKLYSGSADCTIIVWDIQNLQKV 472
Query: 59 DS--TPPSPLQKF-TGHEQGIS-DLATIRLWD-VPTATSLKT-LIGHTNYVFCINFNPQS 112
++ +P+ + H S L I++WD V T LK L G ++V + +
Sbjct: 473 NTIRAHDNPVCTLVSSHNMLFSGSLKAIKVWDIVGTELKLKKELTGLNHWVRALVAS--Q 530
Query: 113 NRIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDAS 172
N + S ++ +TI+IWDI+ +C+ VL V +I IV +Y+ L + D
Sbjct: 531 NYLYSGSY-QTIKIWDIRNLECVHVLQTSGGSVYSIAVTNHH--IVCGTYENLIHVWDIE 587
Query: 173 TPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVI 232
T L G + L ST K +S + + S ++ + ++ H+ V
Sbjct: 588 TKEQVRTLTGHVGTVYALAVISTPDQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGSVT 647
Query: 233 SVASHPAKNIIASGALDNDRTMKIWT 258
++A ++ + SGA+D+ T+K+WT
Sbjct: 648 ALAV--SRGRLFSGAVDS--TVKVWT 669
>UNIPROTKB|F1NNQ9 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0071001 "U4/U6 snRNP" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AADN02026938
EMBL:AADN02026937 IPI:IPI00576508 Ensembl:ENSGALT00000014388
Uniprot:F1NNQ9
Length = 521
Score = 163 (62.4 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 44/171 (25%), Positives = 78/171 (45%)
Query: 6 SLESFRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNF-----DS 60
SLES P + GH V+ V + GR L ++ + + + L + S
Sbjct: 308 SLESDEPVA---DIEGHSMRVARVMWHPSGRFLGTTCYDHSWRLWDLEAQEEILHQEGHS 364
Query: 61 TPPSPLQKFT-GHEQGISDLATI-RLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSD 118
+ T G G L R+WD+ T + L GH ++ +NF+P + +
Sbjct: 365 KGVYDIAFHTDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGLNFSPNGYHVATG 424
Query: 119 TFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRD-GTMIVTSSYDGLYRI 168
+ + T ++WD++ KC+ +PAH + VT + F + G ++T +YD +I
Sbjct: 425 SGDNTCKVWDLRQRKCIYTIPAHQNLVTGVKFEPNHGNFLLTGAYDNTAKI 475
Score = 135 (52.6 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 50/184 (27%), Positives = 84/184 (45%)
Query: 81 TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDT-FNETIRIWDIKTGKCLKVLP 139
+++LW + + + + GH+ V + ++P S R + T ++ + R+WD++ + +
Sbjct: 303 SVKLWSLESDEPVADIEGHSMRVARVMWHP-SGRFLGTTCYDHSWRLWDLEAQEEILHQE 361
Query: 140 AHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYSTRKI- 198
HS V I F+ DG++ T D R+ D T L G L L N+S
Sbjct: 362 GHSKGVYDIAFHTDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGL-NFSPNGYH 420
Query: 199 LKTYSGYTNSKYCISSTFSVTNGK--YIV-SHRDPVISVASHPAK-NIIASGALDNDRTM 254
+ T SG K + + K Y + +H++ V V P N + +GA DN T
Sbjct: 421 VATGSGDNTCK-----VWDLRQRKCIYTIPAHQNLVTGVKFEPNHGNFLLTGAYDN--TA 473
Query: 255 KIWT 258
KIWT
Sbjct: 474 KIWT 477
Score = 123 (48.4 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 41/180 (22%), Positives = 77/180 (42%)
Query: 83 RLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHS 142
RLWD+ + GH+ V+ I F+ + + + R+WD++TG+C+ L H
Sbjct: 347 RLWDLEAQEEILHQEGHSKGVYDIAFHTDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHL 406
Query: 143 DPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRL-WNYSTRKILKT 201
+ ++F+ +G + T S D ++ D + + + + + + L T
Sbjct: 407 KEIYGLNFSPNGYHVATGSGDNTCKVWDLRQRKCIYTIPAHQNLVTGVKFEPNHGNFLLT 466
Query: 202 YSGYTNS-KYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDNDRTMKIWTQE 260
Y N+ K +S K + H V+ + +IA+ + D RT K+WT E
Sbjct: 467 -GAYDNTAKIWTHPGWSPL--KTLAGHEGKVMGLDISLDGQLIATCSYD--RTFKLWTAE 521
>DICTYBASE|DDB_G0293070 [details] [associations]
symbol:DDB_G0293070 "TROVE domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA;ISS] [GO:0005697 "telomerase holoenzyme complex"
evidence=ISS] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008858
InterPro:IPR015943 Pfam:PF00400 Pfam:PF05731 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50988 SMART:SM00320
dictyBase:DDB_G0293070 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003723 EMBL:AAFI02000199
GO:GO:0005697 KO:K11127 InterPro:IPR025139 Pfam:PF13271
RefSeq:XP_629304.1 ProteinModelPortal:Q54CB5 PRIDE:Q54CB5
EnsemblProtists:DDB0237515 GeneID:8629027 KEGG:ddi:DDB_G0293070
InParanoid:Q54CB5 OMA:LPSDWIE ProtClustDB:CLSZ2429313
Uniprot:Q54CB5
Length = 2430
Score = 170 (64.9 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 71/282 (25%), Positives = 122/282 (43%)
Query: 1 MSSDRSLESFRPYTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLS---SISN 57
M +D L L + H ++V++ S+DG + + S + T +S + ++N
Sbjct: 1718 MKNDVLLFDVNSQKLISVMGNHSKSVNHCSLSNDGNYIVTGSDDATAKVWSSTLGTQLTN 1777
Query: 58 F--------DSTPPSPLQKFTGHEQGISDLATIRLWDVPTAT---SLKTLIGHTNYVFCI 106
F + SP Q G +D T+RL+DV + T + L GHT + I
Sbjct: 1778 FLIPGDCWANCLAFSPTQPLLA--VGATD-CTVRLFDVSSNTIYREVAKLHGHTRAITSI 1834
Query: 107 NFNPQSNRIVSDTFNETIRIWDIKTGKC-LKVLPAHSDPVTAIDFNRDGTM-IVTSSYDG 164
F+P N I S + + I++W+++T K + AH+DP+ I FN +++ S D
Sbjct: 1835 TFSPSGNLIASTSEDLLIKVWNVQTHKAEYTIEKAHNDPINCISFNPTNECELISCSDDY 1894
Query: 165 LYRILDASTPNGKFILVGTLDNTLRLWNYSTR-KILKTYSGYTNSKYCISSTFSVTNGKY 223
++ T + G+ NT++ YS K + T S + C + + ++ K
Sbjct: 1895 STKVWSRFTTSTTLSTEGST-NTIKHCVYSPDGKYIATVS-----RDCSIAVYLCSSKKL 1948
Query: 224 IV---SHRDPVISVASHPAKNIIASGALD-NDRTMKIWTQEK 261
+ H D V P + SG D N R I TQ++
Sbjct: 1949 LFRLKGHTDWVNFCTFSPDSKKLVSGGWDFNLRVWNIKTQKE 1990
Score = 150 (57.9 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 54/226 (23%), Positives = 99/226 (43%)
Query: 19 LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTP--PSPLQK--FTGHEQ 74
L GH V++ FS D + L S + L +++ + S ++K FT ++
Sbjct: 1952 LKGHTDWVNFCTFSPDSKKLVSGGWDFNLRVWNIKTQKELLCLKGHSSSIEKAFFTKDQK 2011
Query: 75 GISDLA---TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKT 131
I + ++++WD + + +L T ++ + S RI S + + I+ W
Sbjct: 2012 YIISASFDGSVKVWDAQFGSEITSLRHQTRISDVVSSSDASGRIFSSSDDGIIKSWYPVA 2071
Query: 132 GKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDAS-TPNGKFILVGTLDNTLRL 190
G CL L HS P+ + FN + +SS+ +S P I + D T++L
Sbjct: 2072 GSCLATLTGHSGPIKQVQFNPNSGGGGSSSFSSFSSFSSSSDAPVTLSIASSSDDGTVKL 2131
Query: 191 WNY-STRKILKTYSGYTNSKYCISSTFSVTNGKYIVS-HRDPVISV 234
W + S + G N C+ FS +GKY+ + +D V+++
Sbjct: 2132 WEFNSATATTSAHKGSINQ--CV---FS-KDGKYVATCGQDCVLNI 2171
Score = 149 (57.5 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 62/256 (24%), Positives = 112/256 (43%)
Query: 22 HLRAVSYVKFSHDGR-LLTSSSAEKTLLTYSLSS---ISNFDSTPPSPLQKFTGHEQG-- 75
H RAV+Y +FS LL S + + +++ ++ S NF S P+ G
Sbjct: 1605 HSRAVNYCEFSPTANNLLMSCAWDSSIIIFNTSDKNIFRNFRSAHSKPVNSCCWSPDGTL 1664
Query: 76 ISDLA---TIRLWDVPTATSLKTLIGHT-----NY--VFCINFNPQSNRIVSDTFNETIR 125
I+ + TI++W+ P T K + H +Y + F+ S +I++ T +
Sbjct: 1665 IASSSWDGTIKIWN-PFDTIAKDRLKHVIDASLSYGSIKSCKFSANSKQILATTMKNDVL 1723
Query: 126 IWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDAS--TPNGKFILVGT 183
++D+ + K + V+ HS V + DG IVT S D ++ ++ T F++ G
Sbjct: 1724 LFDVNSQKLISVMGNHSKSVNHCSLSNDGNYIVTGSDDATAKVWSSTLGTQLTNFLIPG- 1782
Query: 184 LDNTLRLWNYS-TRKILKT-YSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKN 241
D +S T+ +L + T + +SS + H + S+ P+ N
Sbjct: 1783 -DCWANCLAFSPTQPLLAVGATDCTVRLFDVSSNTIYREVAKLHGHTRAITSITFSPSGN 1841
Query: 242 IIASGALDNDRTMKIW 257
+IAS + D +K+W
Sbjct: 1842 LIASTS--EDLLIKVW 1855
Score = 133 (51.9 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 63/262 (24%), Positives = 116/262 (44%)
Query: 17 QTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSP--LQKFTGHEQ 74
QT+ G + +S DG ++ S+ + + + S+ S + + F+ +
Sbjct: 1516 QTITGLEDGATACCYSRDGSMIASAGKDSIIHIFKASNGSELLTLVGHSNWISCFSFSDD 1575
Query: 75 GISDLA------TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIV-SDTFNETIRIW 127
G LA T+ +WD+ + H+ V F+P +N ++ S ++ +I I+
Sbjct: 1576 G-KTLASSSWDNTVIVWDLIVGNQIHQFKDHSRAVNYCEFSPTANNLLMSCAWDSSIIIF 1634
Query: 128 DIKTGKCLKVL-PAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDN 186
+ + AHS PV + ++ DGT+I +SS+DG +I + K L +D
Sbjct: 1635 NTSDKNIFRNFRSAHSKPVNSCCWSPDGTLIASSSWDGTIKIWNPFDTIAKDRLKHVIDA 1694
Query: 187 TLRLWNYSTRKILKTYSGYTNSKYCISST-------FSVTNGKYIV---SHRDPVISVAS 236
+L +Y + K K +S NSK +++T F V + K I +H V +
Sbjct: 1695 SL---SYGSIKSCK-FSA--NSKQILATTMKNDVLLFDVNSQKLISVMGNHSKSVNHCSL 1748
Query: 237 HPAKNIIASGALDNDRTMKIWT 258
N I +G+ +D T K+W+
Sbjct: 1749 SNDGNYIVTGS--DDATAKVWS 1768
Score = 126 (49.4 bits), Expect = 0.00020, P = 0.00020
Identities = 72/273 (26%), Positives = 122/273 (44%)
Query: 2 SSDRSLESFRPY--TLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFD 59
S D ++S+ P + TL GH + V+F+ + SSS SS S+F
Sbjct: 2059 SDDGIIKSWYPVAGSCLATLTGHSGPIKQVQFNPNSGGGGSSS---------FSSFSSFS 2109
Query: 60 STPPSPLQKFTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVF-CINFNPQSNRIVSD 118
S+ +P+ T SD T++LW+ +AT+ T H + C+ F+ + +
Sbjct: 2110 SSSDAPV---TLSIASSSDDGTVKLWEFNSATA--TTSAHKGSINQCV-FSKDGKYVATC 2163
Query: 119 TFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDG---LYR-----ILD 170
+ + IWD KT LK + S PVT FNR G + + DG +Y +L
Sbjct: 2164 GQDCVLNIWDAKTHINLKTMIFES-PVTTCSFNRSGVLFI-GLQDGTLEVYSKDWKTVLH 2221
Query: 171 ASTPNGKFILVGTLDNTLRLWNYSTRKILK--TYSGYTNSKYCISSTFSVTNGKY---IV 225
NGK I + +L + + + + +S +TN C++ + KY IV
Sbjct: 2222 KEKTNGK-ITRSSAHPSLNIQSTESPDYIDLFAFSTWTN---CVN--LLNCSEKYFDPIV 2275
Query: 226 SHRDPVISVASHPAKNIIASGALDNDRTMKIWT 258
S D V SV + +++A+G+ + +KI++
Sbjct: 2276 SFDDWVESVEFSTSGDLLAAGS--RTKQVKIFS 2306
Score = 113 (44.8 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 42/181 (23%), Positives = 80/181 (44%)
Query: 13 YTLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSIS---NFDSTPPSPLQ-- 67
Y L+GH RA++ + FS G L+ S+S + + +++ + + P+
Sbjct: 1818 YREVAKLHGHTRAITSITFSPSGNLIASTSEDLLIKVWNVQTHKAEYTIEKAHNDPINCI 1877
Query: 68 KFTGHEQ----GISDLATIRLWD-VPTATSLKTLIGHTNYV-FCINFNPQSNRIVSDTFN 121
F + SD + ++W T+T+L T G TN + C+ ++P I + + +
Sbjct: 1878 SFNPTNECELISCSDDYSTKVWSRFTTSTTLSTE-GSTNTIKHCV-YSPDGKYIATVSRD 1935
Query: 122 ETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILV 181
+I ++ + K L L H+D V F+ D +V+ +D R+ + T L
Sbjct: 1936 CSIAVYLCSSKKLLFRLKGHTDWVNFCTFSPDSKKLVSGGWDFNLRVWNIKTQKELLCLK 1995
Query: 182 G 182
G
Sbjct: 1996 G 1996
Score = 73 (30.8 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 19/58 (32%), Positives = 35/58 (60%)
Query: 173 TPNGKFILVGTLDNTLRLWNYST---RKILKTY-SGYTNSKYCISSTF-SVTNGKYIV 225
+PN K++ +GT D T+ L + ++ R+IL T S T+ K+ S+ SV+N + ++
Sbjct: 2328 SPNDKYLAIGTFDGTVELLDIASGKLRRILTTQVSSITSLKFLDSTRLVSVSNDRSLI 2385
>UNIPROTKB|Q9BZK7 [details] [associations]
symbol:TBL1XR1 "F-box-like/WD repeat-containing protein
TBL1XR1" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=IMP] [GO:0003714 "transcription corepressor
activity" evidence=IGI;IDA] [GO:0042393 "histone binding"
evidence=IDA] [GO:0017053 "transcriptional repressor complex"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISS;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0008013 "beta-catenin binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=IDA] [GO:0000118
"histone deacetylase complex" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0044255 "cellular lipid metabolic process"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_111217 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0044281 EMBL:CH471052 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0007219
GO:GO:0044255 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393
GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AF314544 EMBL:AF268193
EMBL:AK022956 EMBL:BC060320 EMBL:BC113421 IPI:IPI00002922
RefSeq:NP_078941.2 UniGene:Hs.581171 ProteinModelPortal:Q9BZK7
SMR:Q9BZK7 IntAct:Q9BZK7 STRING:Q9BZK7 PhosphoSite:Q9BZK7
DMDM:23396874 PaxDb:Q9BZK7 PRIDE:Q9BZK7 Ensembl:ENST00000430069
Ensembl:ENST00000457928 GeneID:79718 KEGG:hsa:79718 UCSC:uc003fiw.4
CTD:79718 GeneCards:GC03M176737 H-InvDB:HIX0147994 HGNC:HGNC:29529
HPA:HPA019182 MIM:608628 neXtProt:NX_Q9BZK7 PharmGKB:PA134928556
HOGENOM:HOG000220902 HOVERGEN:HBG050240 InParanoid:Q9BZK7
OMA:LANNHAD OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 GenomeRNAi:79718
NextBio:69065 PMAP-CutDB:Q9BZK7 ArrayExpress:Q9BZK7 Bgee:Q9BZK7
CleanEx:HS_TBL1XR1 Genevestigator:Q9BZK7 GermOnline:ENSG00000177565
Uniprot:Q9BZK7
Length = 514
Score = 142 (55.0 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 29/106 (27%), Positives = 53/106 (50%)
Query: 77 SDLATIRLWDVPTATSLKTLIGHTNYVFCINF--------NPQSN-RIVSDTFNETIRIW 127
SD T+++W + + L H ++ I + NP +N + S +F+ T+R+W
Sbjct: 368 SDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLW 427
Query: 128 DIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDAST 173
D+ G C+ L H +PV ++ F+ DG + + S+D I + T
Sbjct: 428 DVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQT 473
Score = 141 (54.7 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 51/220 (23%), Positives = 94/220 (42%)
Query: 15 LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISN-----FDSTPPSPL--Q 67
L TL H + +K++ G + S+ +KT + + + F S P + Q
Sbjct: 258 LASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ 317
Query: 68 KFTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIW 127
+D+ I + + +KT GHTN V I ++P N + S + + T++IW
Sbjct: 318 SNNTFASCSTDMC-IHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIW 376
Query: 128 DIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVG-TLDN 186
+K C+ L AH+ + I ++ G + PN +L + D+
Sbjct: 377 SMKQDNCVHDLQAHNKEIYTIKWSPTGP--------------GTNNPNANLMLASASFDS 422
Query: 187 TLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVS 226
T+RLW+ + T + + Y ++ FS +G+Y+ S
Sbjct: 423 TVRLWDVDRGICIHTLTKHQEPVYSVA--FS-PDGRYLAS 459
Score = 135 (52.6 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 43/170 (25%), Positives = 74/170 (43%)
Query: 17 QTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS---ISNFDSTPP-------SPL 66
+T GH V+ +K+ G LL S S + TL +S+ + + + SP
Sbjct: 343 KTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPT 402
Query: 67 QKFTGHEQGISDLA------TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTF 120
T + LA T+RLWDV + TL H V+ + F+P + S +F
Sbjct: 403 GPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSF 462
Query: 121 NETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
++ + IW+ +TG + + + + +N G + S+ DG +LD
Sbjct: 463 DKCVHIWNTQTGALVHSYRG-TGGIFEVCWNAAGDKVGASASDGSVCVLD 511
Score = 116 (45.9 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 31/98 (31%), Positives = 55/98 (56%)
Query: 86 DVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIK----TGK-------C 134
++P ++ L GH + VF +NP S+ + S + + T RIW++ +G C
Sbjct: 156 EIPPNKAV-VLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHC 214
Query: 135 LKV----LPAHSDPVTAIDFNRDGTMIVTSSYDGLYRI 168
++ +P++ D VT++D+N +GT++ T SYDG RI
Sbjct: 215 IREGGQDVPSNKD-VTSLDWNSEGTLLATGSYDGFARI 251
Score = 63 (27.2 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 224 IVSHRDPVISVASHPAKNIIASGALDNDRTMKIW-TQ 259
+ H++PV SVA P +ASG+ D + + IW TQ
Sbjct: 438 LTKHQEPVYSVAFSPDGRYLASGSFD--KCVHIWNTQ 472
Score = 57 (25.1 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 12/41 (29%), Positives = 23/41 (56%)
Query: 222 KYIVSHRDPVISVASHPAKNIIASGALDNDRTMKIWTQEKE 262
K H + V ++ P N++AS +D T+KIW+ +++
Sbjct: 343 KTFQGHTNEVNAIKWDPTGNLLAS--CSDDMTLKIWSMKQD 381
Score = 44 (20.5 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 19 LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDST 61
L GH V ++ LL S S + T ++LS S ST
Sbjct: 165 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGST 207
>UNIPROTKB|F1SGD0 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 OMA:GYARIWM
EMBL:CU856317 Ensembl:ENSSSCT00000012871 Uniprot:F1SGD0
Length = 514
Score = 142 (55.0 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 29/106 (27%), Positives = 53/106 (50%)
Query: 77 SDLATIRLWDVPTATSLKTLIGHTNYVFCINF--------NPQSN-RIVSDTFNETIRIW 127
SD T+++W + + L H ++ I + NP +N + S +F+ T+R+W
Sbjct: 368 SDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLW 427
Query: 128 DIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDAST 173
D+ G C+ L H +PV ++ F+ DG + + S+D I + T
Sbjct: 428 DVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQT 473
Score = 141 (54.7 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 51/220 (23%), Positives = 94/220 (42%)
Query: 15 LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISN-----FDSTPPSPL--Q 67
L TL H + +K++ G + S+ +KT + + + F S P + Q
Sbjct: 258 LASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ 317
Query: 68 KFTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIW 127
+D+ I + + +KT GHTN V I ++P N + S + + T++IW
Sbjct: 318 SNNTFASCSTDMC-IHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIW 376
Query: 128 DIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVG-TLDN 186
+K C+ L AH+ + I ++ G + PN +L + D+
Sbjct: 377 SMKQDNCVHDLQAHNKEIYTIKWSPTGP--------------GTNNPNANLMLASASFDS 422
Query: 187 TLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVS 226
T+RLW+ + T + + Y ++ FS +G+Y+ S
Sbjct: 423 TVRLWDVDRGICIHTLTKHQEPVYSVA--FS-PDGRYLAS 459
Score = 135 (52.6 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 43/170 (25%), Positives = 74/170 (43%)
Query: 17 QTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS---ISNFDSTPP-------SPL 66
+T GH V+ +K+ G LL S S + TL +S+ + + + SP
Sbjct: 343 KTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPT 402
Query: 67 QKFTGHEQGISDLA------TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTF 120
T + LA T+RLWDV + TL H V+ + F+P + S +F
Sbjct: 403 GPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSF 462
Query: 121 NETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
++ + IW+ +TG + + + + +N G + S+ DG +LD
Sbjct: 463 DKCVHIWNTQTGALVHSYRG-TGGIFEVCWNAAGDKVGASASDGSVCVLD 511
Score = 116 (45.9 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 31/98 (31%), Positives = 55/98 (56%)
Query: 86 DVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIK----TGK-------C 134
++P ++ L GH + VF +NP S+ + S + + T RIW++ +G C
Sbjct: 156 EIPPNKAV-VLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHC 214
Query: 135 LKV----LPAHSDPVTAIDFNRDGTMIVTSSYDGLYRI 168
++ +P++ D VT++D+N +GT++ T SYDG RI
Sbjct: 215 IREGGQDVPSNKD-VTSLDWNSEGTLLATGSYDGFARI 251
Score = 63 (27.2 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 224 IVSHRDPVISVASHPAKNIIASGALDNDRTMKIW-TQ 259
+ H++PV SVA P +ASG+ D + + IW TQ
Sbjct: 438 LTKHQEPVYSVAFSPDGRYLASGSFD--KCVHIWNTQ 472
Score = 57 (25.1 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 12/41 (29%), Positives = 23/41 (56%)
Query: 222 KYIVSHRDPVISVASHPAKNIIASGALDNDRTMKIWTQEKE 262
K H + V ++ P N++AS +D T+KIW+ +++
Sbjct: 343 KTFQGHTNEVNAIKWDPTGNLLAS--CSDDMTLKIWSMKQD 381
Score = 44 (20.5 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 19 LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDST 61
L GH V ++ LL S S + T ++LS S ST
Sbjct: 165 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGST 207
>MGI|MGI:2441730 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1X-linked receptor 1"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=ISO;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IC]
[GO:0005876 "spindle microtubule" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=ISO] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] [GO:0044212 "transcription
regulatory region DNA binding" evidence=ISO;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IMP] [GO:0047485
"protein N-terminus binding" evidence=ISO] [GO:0060070 "canonical
Wnt receptor signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:2441730 GO:GO:0017053
GO:GO:0003714 GO:GO:0045892 GO:GO:0005654 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024 KO:K04508
CTD:79718 HOGENOM:HOG000220902 HOVERGEN:HBG050240 OMA:LANNHAD
OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 EMBL:AF268195 EMBL:AK029595
EMBL:AK033347 EMBL:AK036064 EMBL:AK136255 EMBL:BC018512
IPI:IPI00308283 RefSeq:NP_109657.2 UniGene:Mm.202966
UniGene:Mm.446265 ProteinModelPortal:Q8BHJ5 SMR:Q8BHJ5
IntAct:Q8BHJ5 STRING:Q8BHJ5 PhosphoSite:Q8BHJ5 PaxDb:Q8BHJ5
PRIDE:Q8BHJ5 DNASU:81004 Ensembl:ENSMUST00000063988 GeneID:81004
KEGG:mmu:81004 InParanoid:Q8BHJ5 NextBio:350342 Bgee:Q8BHJ5
CleanEx:MM_TBL1XR1 Genevestigator:Q8BHJ5
GermOnline:ENSMUSG00000027630 Uniprot:Q8BHJ5
Length = 514
Score = 142 (55.0 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 29/106 (27%), Positives = 53/106 (50%)
Query: 77 SDLATIRLWDVPTATSLKTLIGHTNYVFCINF--------NPQSN-RIVSDTFNETIRIW 127
SD T+++W + + L H ++ I + NP +N + S +F+ T+R+W
Sbjct: 368 SDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLW 427
Query: 128 DIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDAST 173
D+ G C+ L H +PV ++ F+ DG + + S+D I + T
Sbjct: 428 DVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQT 473
Score = 141 (54.7 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 51/220 (23%), Positives = 94/220 (42%)
Query: 15 LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISN-----FDSTPPSPL--Q 67
L TL H + +K++ G + S+ +KT + + + F S P + Q
Sbjct: 258 LASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ 317
Query: 68 KFTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIW 127
+D+ I + + +KT GHTN V I ++P N + S + + T++IW
Sbjct: 318 SNNTFASCSTDMC-IHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIW 376
Query: 128 DIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVG-TLDN 186
+K C+ L AH+ + I ++ G + PN +L + D+
Sbjct: 377 SMKQDNCVHDLQAHNKEIYTIKWSPTGP--------------GTNNPNANLMLASASFDS 422
Query: 187 TLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVS 226
T+RLW+ + T + + Y ++ FS +G+Y+ S
Sbjct: 423 TVRLWDVDRGICIHTLTKHQEPVYSVA--FS-PDGRYLAS 459
Score = 135 (52.6 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 43/170 (25%), Positives = 74/170 (43%)
Query: 17 QTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS---ISNFDSTPP-------SPL 66
+T GH V+ +K+ G LL S S + TL +S+ + + + SP
Sbjct: 343 KTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPT 402
Query: 67 QKFTGHEQGISDLA------TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTF 120
T + LA T+RLWDV + TL H V+ + F+P + S +F
Sbjct: 403 GPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSF 462
Query: 121 NETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
++ + IW+ +TG + + + + +N G + S+ DG +LD
Sbjct: 463 DKCVHIWNTQTGALVHSYRG-TGGIFEVCWNAAGDKVGASASDGSVCVLD 511
Score = 117 (46.2 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 30/98 (30%), Positives = 54/98 (55%)
Query: 86 DVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGK-----------C 134
++P+ ++ L GH + VF +NP S+ + S + + T RIW++ C
Sbjct: 156 EIPSNKAV-VLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGPTQLVLRHC 214
Query: 135 LKV----LPAHSDPVTAIDFNRDGTMIVTSSYDGLYRI 168
++ +P++ D VT++D+N +GT++ T SYDG RI
Sbjct: 215 IREGGQDVPSNKD-VTSLDWNSEGTLLATGSYDGFARI 251
Score = 63 (27.2 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 224 IVSHRDPVISVASHPAKNIIASGALDNDRTMKIW-TQ 259
+ H++PV SVA P +ASG+ D + + IW TQ
Sbjct: 438 LTKHQEPVYSVAFSPDGRYLASGSFD--KCVHIWNTQ 472
Score = 57 (25.1 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 12/41 (29%), Positives = 23/41 (56%)
Query: 222 KYIVSHRDPVISVASHPAKNIIASGALDNDRTMKIWTQEKE 262
K H + V ++ P N++AS +D T+KIW+ +++
Sbjct: 343 KTFQGHTNEVNAIKWDPTGNLLAS--CSDDMTLKIWSMKQD 381
>RGD|1560053 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1 X-linked receptor 1"
species:10116 "Rattus norvegicus" [GO:0000118 "histone deacetylase
complex" evidence=IEA;ISO] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003714 "transcription corepressor
activity" evidence=IEA;ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005876
"spindle microtubule" evidence=IEA;ISO] [GO:0008013 "beta-catenin
binding" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0017053 "transcriptional repressor complex"
evidence=IEA;ISO] [GO:0042393 "histone binding" evidence=IEA;ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA;ISO] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0047485
"protein N-terminus binding" evidence=IEA;ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 RGD:1560053 GO:GO:0017053 GO:GO:0003714
GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513
GO:GO:0060070 GO:GO:0005876 EMBL:CH473961 GO:GO:0000118
GeneTree:ENSGT00690000102024 KO:K04508 CTD:79718 OrthoDB:EOG412M5M
IPI:IPI00367976 RefSeq:NP_001102411.1 UniGene:Rn.140831
Ensembl:ENSRNOT00000015573 GeneID:365755 KEGG:rno:365755
UCSC:RGD:1560053 NextBio:687981 Uniprot:D3ZNF4
Length = 514
Score = 142 (55.0 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 29/106 (27%), Positives = 53/106 (50%)
Query: 77 SDLATIRLWDVPTATSLKTLIGHTNYVFCINF--------NPQSN-RIVSDTFNETIRIW 127
SD T+++W + + L H ++ I + NP +N + S +F+ T+R+W
Sbjct: 368 SDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLW 427
Query: 128 DIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDAST 173
D+ G C+ L H +PV ++ F+ DG + + S+D I + T
Sbjct: 428 DVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQT 473
Score = 141 (54.7 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 51/220 (23%), Positives = 94/220 (42%)
Query: 15 LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISN-----FDSTPPSPL--Q 67
L TL H + +K++ G + S+ +KT + + + F S P + Q
Sbjct: 258 LASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ 317
Query: 68 KFTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIW 127
+D+ I + + +KT GHTN V I ++P N + S + + T++IW
Sbjct: 318 SNNTFASCSTDMC-IHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIW 376
Query: 128 DIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVG-TLDN 186
+K C+ L AH+ + I ++ G + PN +L + D+
Sbjct: 377 SMKQDNCVHDLQAHNKEIYTIKWSPTGP--------------GTNNPNANLMLASASFDS 422
Query: 187 TLRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVS 226
T+RLW+ + T + + Y ++ FS +G+Y+ S
Sbjct: 423 TVRLWDVDRGICIHTLTKHQEPVYSVA--FS-PDGRYLAS 459
Score = 135 (52.6 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 43/170 (25%), Positives = 74/170 (43%)
Query: 17 QTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS---ISNFDSTPP-------SPL 66
+T GH V+ +K+ G LL S S + TL +S+ + + + SP
Sbjct: 343 KTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPT 402
Query: 67 QKFTGHEQGISDLA------TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTF 120
T + LA T+RLWDV + TL H V+ + F+P + S +F
Sbjct: 403 GPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSF 462
Query: 121 NETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
++ + IW+ +TG + + + + +N G + S+ DG +LD
Sbjct: 463 DKCVHIWNTQTGALVHSYRG-TGGIFEVCWNAAGDKVGASASDGSVCVLD 511
Score = 115 (45.5 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 30/98 (30%), Positives = 53/98 (54%)
Query: 86 DVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGK-----------C 134
++P ++ L GH + VF +NP S+ + S + + T RIW++ C
Sbjct: 156 EIPPNKAV-VLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGPTQLVLRHC 214
Query: 135 LKV----LPAHSDPVTAIDFNRDGTMIVTSSYDGLYRI 168
++ +P++ D VT++D+N +GT++ T SYDG RI
Sbjct: 215 IREGGQDVPSNKD-VTSLDWNSEGTLLATGSYDGFARI 251
Score = 63 (27.2 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 224 IVSHRDPVISVASHPAKNIIASGALDNDRTMKIW-TQ 259
+ H++PV SVA P +ASG+ D + + IW TQ
Sbjct: 438 LTKHQEPVYSVAFSPDGRYLASGSFD--KCVHIWNTQ 472
Score = 57 (25.1 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 12/41 (29%), Positives = 23/41 (56%)
Query: 222 KYIVSHRDPVISVASHPAKNIIASGALDNDRTMKIWTQEKE 262
K H + V ++ P N++AS +D T+KIW+ +++
Sbjct: 343 KTFQGHTNEVNAIKWDPTGNLLAS--CSDDMTLKIWSMKQD 381
>DICTYBASE|DDB_G0295761 [details] [associations]
symbol:nle1 "putative notchless" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0295761 InterPro:IPR001632
GO:GO:0005634 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 PRINTS:PR00319
KO:K14855 OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154
RefSeq:XP_002649195.1 ProteinModelPortal:C7FZX3
EnsemblProtists:DDB0252725 GeneID:8616962 KEGG:ddi:DDB_G0295761
Uniprot:C7FZX3
Length = 507
Score = 162 (62.1 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 33/88 (37%), Positives = 51/88 (57%)
Query: 81 TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPA 140
+I+LWD + L GH V+ + ++ S +VS + + T++IWDIKT K K LP
Sbjct: 417 SIKLWDGQSGKFLGNFRGHVGAVYQVCWSSDSRYLVSGSKDSTLKIWDIKTKKMEKELPG 476
Query: 141 HSDPVTAIDFNRDGTMIVTSSYDGLYRI 168
H+D V +D++ DG + + S D L RI
Sbjct: 477 HADEVYTVDWSPDGDRVASGSKDRLLRI 504
Score = 152 (58.6 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 67/224 (29%), Positives = 105/224 (46%)
Query: 11 RPYT-LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLL---------TYSLSSISNFD- 59
RP T +++GH AV FS DG+ S + T+ T++L +N+
Sbjct: 127 RPVTRCASSMSGHTEAVLNCAFSPDGKGFVSVGGDTTVRIWDIYTSTPTHTLKGHTNWVL 186
Query: 60 STPPSPLQKFTGHEQGISDLATIRLWDVPTATSL-KTLIGHTNYVFCINF-----NPQSN 113
SP K G+ IR+W T L TL GHT ++ +++ NP+
Sbjct: 187 QVAWSPDSKKIA-TAGME--GDIRIWCPQTGKQLGSTLKGHTKFITGLSWEPFHLNPKCV 243
Query: 114 RIVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDAST 173
R+ S + + TIRIWD ++ K L L H+ VT + + +G +I + S D R+ + T
Sbjct: 244 RLASSSKDSTIRIWDTESCKNLMSLSGHTMSVTCLKWGGEG-LIYSGSQDRTVRVFN--T 300
Query: 174 PNGKFILVGTLD------NTLRLWNYSTRKILKTYS-GYTNSKY 210
+G+ LV LD NTL L +T +L+T S +T +Y
Sbjct: 301 TDGR--LVRVLDGHAHWVNTLAL---NTDYVLRTGSYDHTGKEY 339
Score = 147 (56.8 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 52/199 (26%), Positives = 91/199 (45%)
Query: 2 SSDRSLESFRPYT--LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTY-SLSSISNF 58
S DR++ F L + L+GH V+ + + D +L + S + T Y +L
Sbjct: 290 SQDRTVRVFNTTDGRLVRVLDGHAHWVNTLALNTD-YVLRTGSYDHTGKEYDTLEEAQRV 348
Query: 59 DSTPPSPLQ-KFTGHEQGIS--DLATIRLWDVP-TATSLKTLIGHTNYVFCINFNPQSNR 114
+ ++ K G E IS D T+ +W+ T TS+ L GH + ++F+P
Sbjct: 349 ALERYNDVKAKSKGMEILISGSDDFTVIMWNPSVTKTSISRLTGHQQLINLVSFSPDGRY 408
Query: 115 IVSDTFNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTP 174
S +F+++I++WD ++GK L H V + ++ D +V+ S D +I D T
Sbjct: 409 FASASFDKSIKLWDGQSGKFLGNFRGHVGAVYQVCWSSDSRYLVSGSKDSTLKIWDIKTK 468
Query: 175 NGKFILVGTLDNTLRL-WN 192
+ L G D + W+
Sbjct: 469 KMEKELPGHADEVYTVDWS 487
Score = 141 (54.7 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 38/140 (27%), Positives = 72/140 (51%)
Query: 2 SSDRSLESFRPYTLTQT----LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS--- 54
S D ++ + P ++T+T L GH + ++ V FS DGR S+S +K++ + S
Sbjct: 370 SDDFTVIMWNP-SVTKTSISRLTGHQQLINLVSFSPDGRYFASASFDKSIKLWDGQSGKF 428
Query: 55 ISNFDSTPPSPLQKFTGHEQ-----GISDLATIRLWDVPTATSLKTLIGHTNYVFCINFN 109
+ NF + Q + G D +T+++WD+ T K L GH + V+ ++++
Sbjct: 429 LGNFRGHVGAVYQVCWSSDSRYLVSGSKD-STLKIWDIKTKKMEKELPGHADEVYTVDWS 487
Query: 110 PQSNRIVSDTFNETIRIWDI 129
P +R+ S + + +RIW +
Sbjct: 488 PDGDRVASGSKDRLLRIWTV 507
Score = 135 (52.6 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 39/133 (29%), Positives = 67/133 (50%)
Query: 81 TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPA 140
T+R+WD+ T+T TL GHTN+V + ++P S +I + IRIW +TGK L
Sbjct: 163 TVRIWDIYTSTPTHTLKGHTNWVLQVAWSPDSKKIATAGMEGDIRIWCPQTGKQLG---- 218
Query: 141 HSDPVTAIDFNRDGTMIVTS-SYDGLYRILDASTPNGKFILVGTLDNTLRLWNYSTRKIL 199
+ + + T +T S++ + P + + D+T+R+W+ + K L
Sbjct: 219 -----STL---KGHTKFITGLSWEPFHL-----NPKCVRLASSSKDSTIRIWDTESCKNL 265
Query: 200 KTYSGYTNSKYCI 212
+ SG+T S C+
Sbjct: 266 MSLSGHTMSVTCL 278
>WB|WBGene00018014 [details] [associations]
symbol:F33G12.2 species:6239 "Caenorhabditis elegans"
[GO:0019915 "lipid storage" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 GO:GO:0019915 HSSP:P16649
GeneTree:ENSGT00700000104496 HOGENOM:HOG000091642 KO:K13124
OMA:CKQGAVR EMBL:FO080686 RefSeq:NP_494926.1
ProteinModelPortal:Q19986 SMR:Q19986 IntAct:Q19986 STRING:Q19986
EnsemblMetazoa:F33G12.2 GeneID:173867 KEGG:cel:CELE_F33G12.2
UCSC:F33G12.2 CTD:173867 WormBase:F33G12.2 InParanoid:Q19986
NextBio:881457 Uniprot:Q19986
Length = 305
Score = 128 (50.1 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 40/171 (23%), Positives = 83/171 (48%)
Query: 81 TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPA 140
T++LW+ ++ LKT G N V + +++I + + ++D++TGK L+
Sbjct: 39 TVKLWNPLKSSLLKTYSGTGNEVLDAASSSDNSQIAAGGADRACTVFDVETGKQLRRWRT 98
Query: 141 HSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILV--GTLDNTLRLWNYSTRKI 198
H V A+ FN + +++ + S D + D + + K I + + D L + + + +I
Sbjct: 99 HGAQVNAVAFNEESSVVFSGSMDCTMQAFDCRSRSEKPIQIFNESTDGILSI-DVNGHEI 157
Query: 199 LKTYSGYTNSKYCISSTFSVTNGKYIVSHR-DPVISVASHPAKNIIASGAL 248
+ +G + Y + +S+ +G V + D V SV+ P N + +G +
Sbjct: 158 V---AGSADGNYRV---YSIRDGNMTVDYMGDSVNSVSFTPDSNCLLAGVM 202
Score = 104 (41.7 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 39/154 (25%), Positives = 74/154 (48%)
Query: 25 AVSYVKFSHDGRLLTSSSAEKTLLTYS-LSS--ISNFDSTPPSPLQKFTGHEQ-----GI 76
AV V+++ DG + ++KT+ ++ L S + + T L + + G
Sbjct: 18 AVRAVRYNVDGNYCVTCGSDKTVKLWNPLKSSLLKTYSGTGNEVLDAASSSDNSQIAAGG 77
Query: 77 SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTG--KC 134
+D A ++DV T L+ H V + FN +S+ + S + + T++ +D ++ K
Sbjct: 78 ADRACT-VFDVETGKQLRRWRTHGAQVNAVAFNEESSVVFSGSMDCTMQAFDCRSRSEKP 136
Query: 135 LKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRI 168
+++ +D + +ID N G IV S DG YR+
Sbjct: 137 IQIFNESTDGILSIDVN--GHEIVAGSADGNYRV 168
Score = 98 (39.6 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 31/102 (30%), Positives = 51/102 (50%)
Query: 152 RDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKY- 210
RDG M V D + + + TP+ +L G + +RL + S+ K+L +Y G+ N++Y
Sbjct: 172 RDGNMTVDYMGDSVNSV--SFTPDSNCLLAGVMGGIVRLIDKSSGKLLASYKGHQNTEYK 229
Query: 211 --C--ISSTFSVTNGK-----YIVSHRDP-VISVASHPAKNI 242
C + S V +G Y+ S D ++S HP+K I
Sbjct: 230 LDCRVLQSIEHVASGSEDGFVYVYSLLDSHIVSKLEHPSKVI 271
>UNIPROTKB|Q19986 [details] [associations]
symbol:F33G12.2 "Protein F33G12.2" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
GO:GO:0019915 HSSP:P16649 GeneTree:ENSGT00700000104496
HOGENOM:HOG000091642 KO:K13124 OMA:CKQGAVR EMBL:FO080686
RefSeq:NP_494926.1 ProteinModelPortal:Q19986 SMR:Q19986
IntAct:Q19986 STRING:Q19986 EnsemblMetazoa:F33G12.2 GeneID:173867
KEGG:cel:CELE_F33G12.2 UCSC:F33G12.2 CTD:173867 WormBase:F33G12.2
InParanoid:Q19986 NextBio:881457 Uniprot:Q19986
Length = 305
Score = 128 (50.1 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 40/171 (23%), Positives = 83/171 (48%)
Query: 81 TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPA 140
T++LW+ ++ LKT G N V + +++I + + ++D++TGK L+
Sbjct: 39 TVKLWNPLKSSLLKTYSGTGNEVLDAASSSDNSQIAAGGADRACTVFDVETGKQLRRWRT 98
Query: 141 HSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILV--GTLDNTLRLWNYSTRKI 198
H V A+ FN + +++ + S D + D + + K I + + D L + + + +I
Sbjct: 99 HGAQVNAVAFNEESSVVFSGSMDCTMQAFDCRSRSEKPIQIFNESTDGILSI-DVNGHEI 157
Query: 199 LKTYSGYTNSKYCISSTFSVTNGKYIVSHR-DPVISVASHPAKNIIASGAL 248
+ +G + Y + +S+ +G V + D V SV+ P N + +G +
Sbjct: 158 V---AGSADGNYRV---YSIRDGNMTVDYMGDSVNSVSFTPDSNCLLAGVM 202
Score = 104 (41.7 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 39/154 (25%), Positives = 74/154 (48%)
Query: 25 AVSYVKFSHDGRLLTSSSAEKTLLTYS-LSS--ISNFDSTPPSPLQKFTGHEQ-----GI 76
AV V+++ DG + ++KT+ ++ L S + + T L + + G
Sbjct: 18 AVRAVRYNVDGNYCVTCGSDKTVKLWNPLKSSLLKTYSGTGNEVLDAASSSDNSQIAAGG 77
Query: 77 SDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTG--KC 134
+D A ++DV T L+ H V + FN +S+ + S + + T++ +D ++ K
Sbjct: 78 ADRACT-VFDVETGKQLRRWRTHGAQVNAVAFNEESSVVFSGSMDCTMQAFDCRSRSEKP 136
Query: 135 LKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRI 168
+++ +D + +ID N G IV S DG YR+
Sbjct: 137 IQIFNESTDGILSIDVN--GHEIVAGSADGNYRV 168
Score = 98 (39.6 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 31/102 (30%), Positives = 51/102 (50%)
Query: 152 RDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNTLRLWNYSTRKILKTYSGYTNSKY- 210
RDG M V D + + + TP+ +L G + +RL + S+ K+L +Y G+ N++Y
Sbjct: 172 RDGNMTVDYMGDSVNSV--SFTPDSNCLLAGVMGGIVRLIDKSSGKLLASYKGHQNTEYK 229
Query: 211 --C--ISSTFSVTNGK-----YIVSHRDP-VISVASHPAKNI 242
C + S V +G Y+ S D ++S HP+K I
Sbjct: 230 LDCRVLQSIEHVASGSEDGFVYVYSLLDSHIVSKLEHPSKVI 271
>UNIPROTKB|F1NYZ8 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0008013 "beta-catenin
binding" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0047485 "protein N-terminus binding" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 EMBL:AADN02020878
EMBL:AADN02020879 EMBL:AADN02020880 EMBL:AADN02020881
EMBL:AADN02020882 EMBL:AADN02020883 EMBL:AADN02020884
EMBL:AADN02020885 EMBL:AADN02020886 EMBL:AADN02020887
EMBL:AADN02020888 EMBL:AADN02020889 EMBL:AADN02020890
EMBL:AADN02020891 EMBL:AADN02020892 EMBL:AADN02020893
EMBL:AADN02020894 EMBL:AADN02020895 EMBL:AADN02020896
EMBL:AADN02020897 EMBL:AADN02020898 IPI:IPI00594570
Ensembl:ENSGALT00000001912 ArrayExpress:F1NYZ8 Uniprot:F1NYZ8
Length = 517
Score = 140 (54.3 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 52/219 (23%), Positives = 98/219 (44%)
Query: 15 LTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISN-----FDSTPPSPL--Q 67
L TL H + +K++ G + S+ +KT + + + F S P + Q
Sbjct: 258 LASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ 317
Query: 68 KFTGHEQGISDLATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIW 127
+D+ I + + +KT GHTN V I ++P N + S + + T++IW
Sbjct: 318 SNNTFASCSTDMC-IHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIW 376
Query: 128 DIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDNT 187
+K C+ L AH+ + I ++ G T++ + ++ AS + F D+T
Sbjct: 377 SMKQDSCVHDLQAHNKEIYTIKWSPTGPG--TNNPNA--NLMLASLDSASF------DST 426
Query: 188 LRLWNYSTRKILKTYSGYTNSKYCISSTFSVTNGKYIVS 226
+RLW+ + T + + Y ++ FS +G+Y+ S
Sbjct: 427 VRLWDVDRGICIHTLTKHQEPVYSVA--FS-PDGRYLAS 462
Score = 136 (52.9 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 29/109 (26%), Positives = 55/109 (50%)
Query: 77 SDLATIRLWDVPTATSLKTLIGHTNYVFCINF--------NPQSNRIV----SDTFNETI 124
SD T+++W + + + L H ++ I + NP +N ++ S +F+ T+
Sbjct: 368 SDDMTLKIWSMKQDSCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASLDSASFDSTV 427
Query: 125 RIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDAST 173
R+WD+ G C+ L H +PV ++ F+ DG + + S+D I + T
Sbjct: 428 RLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQT 476
Score = 120 (47.3 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 25/91 (27%), Positives = 46/91 (50%)
Query: 80 ATIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLP 139
+T+RLWDV + TL H V+ + F+P + S +F++ + IW+ +TG +
Sbjct: 425 STVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYR 484
Query: 140 AHSDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
+ + + +N G + S+ DG +LD
Sbjct: 485 G-TGGIFEVCWNAAGDKVGASASDGSVCVLD 514
Score = 116 (45.9 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 31/98 (31%), Positives = 55/98 (56%)
Query: 86 DVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIK----TGK-------C 134
++P ++ L GH + VF +NP S+ + S + + T RIW++ +G C
Sbjct: 156 EIPPNKAV-VLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHC 214
Query: 135 LKV----LPAHSDPVTAIDFNRDGTMIVTSSYDGLYRI 168
++ +P++ D VT++D+N +GT++ T SYDG RI
Sbjct: 215 IREGGQDVPSNKD-VTSLDWNSEGTLLATGSYDGFARI 251
Score = 63 (27.2 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 224 IVSHRDPVISVASHPAKNIIASGALDNDRTMKIW-TQ 259
+ H++PV SVA P +ASG+ D + + IW TQ
Sbjct: 441 LTKHQEPVYSVAFSPDGRYLASGSFD--KCVHIWNTQ 475
Score = 57 (25.1 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 12/41 (29%), Positives = 23/41 (56%)
Query: 222 KYIVSHRDPVISVASHPAKNIIASGALDNDRTMKIWTQEKE 262
K H + V ++ P N++AS +D T+KIW+ +++
Sbjct: 343 KTFQGHTNEVNAIKWDPTGNLLAS--CSDDMTLKIWSMKQD 381
Score = 44 (20.5 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 19 LNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDST 61
L GH V ++ LL S S + T ++LS S ST
Sbjct: 165 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGST 207
>ZFIN|ZDB-GENE-990415-89 [details] [associations]
symbol:gnb2l1 "guanine nucleotide binding protein (G
protein), beta polypeptide 2-like 1" species:7955 "Danio rerio"
[GO:0001525 "angiogenesis" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0060027 "convergent extension involved in
gastrulation" evidence=IGI;IMP] [GO:0051302 "regulation of cell
division" evidence=IMP] [GO:2000114 "regulation of establishment of
cell polarity" evidence=IMP] [GO:0032880 "regulation of protein
localization" evidence=IMP] [GO:0030178 "negative regulation of Wnt
receptor signaling pathway" evidence=IMP] [GO:2000543 "positive
regulation of gastrulation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-990415-89 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032880 GO:GO:0001525 GO:GO:0030178 GO:GO:0060027
GO:GO:2000114 GO:GO:0051302 GO:GO:2000543 HOGENOM:HOG000091643
KO:K14753 CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
OrthoDB:EOG4933J5 EMBL:AF025330 EMBL:AY423038 EMBL:BC049459
IPI:IPI00507097 RefSeq:NP_571519.1 UniGene:Dr.75572
ProteinModelPortal:O42248 SMR:O42248 STRING:O42248 PRIDE:O42248
Ensembl:ENSDART00000061001 GeneID:30722 KEGG:dre:30722
InParanoid:O42248 NextBio:20807071 ArrayExpress:O42248 Bgee:O42248
Uniprot:O42248
Length = 317
Score = 148 (57.2 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 44/175 (25%), Positives = 86/175 (49%)
Query: 14 TLTQTLNGHLRAVSYVKFSHD-GRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFTGH 72
T+ TL GH V+ + + ++ S+S +KT++ + L+ P L+ GH
Sbjct: 6 TVRGTLKGHSGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALR---GH 62
Query: 73 EQGISDLA---------------TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVS 117
+SD+ T+RLWD+ T T+ + +GHT V + F+ + +IVS
Sbjct: 63 SHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSADNRQIVS 122
Query: 118 DTFNETIRIWDIKTGKCLKVLP--AHSDPVTAIDF--NRDGTMIVTSSYDGLYRI 168
+ ++TI++W+ G C + +H++ V+ + F N +IV+ +D + ++
Sbjct: 123 GSRDKTIKLWNT-LGVCKYTIQDDSHTEWVSCVRFSPNSSNPIIVSCGWDKMVKV 176
Score = 125 (49.1 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 51/186 (27%), Positives = 83/186 (44%)
Query: 13 YTLTQ-TLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSS---ISNFDSTPPSPLQ- 67
Y + Q L GH VS V S DG+ S S + TL + L++ F L
Sbjct: 52 YGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSV 111
Query: 68 KFTGHEQGI---SDLATIRLWDVPTATSLKTLI---GHTNYVFCINFNPQSNR--IVSDT 119
F+ + I S TI+LW+ T K I HT +V C+ F+P S+ IVS
Sbjct: 112 AFSADNRQIVSGSRDKTIKLWN--TLGVCKYTIQDDSHTEWVSCVRFSPNSSNPIIVSCG 169
Query: 120 FNETIRIWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFI 179
+++ +++W++ K H+ + + + DG++ + DG + D + GK +
Sbjct: 170 WDKMVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLN--EGKHL 227
Query: 180 LVGTLD 185
TLD
Sbjct: 228 Y--TLD 231
Score = 110 (43.8 bits), Expect = 0.00091, P = 0.00091
Identities = 36/149 (24%), Positives = 66/149 (44%)
Query: 14 TLTQTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQ-----K 68
T T+ GH + V V FS D R + S S +KT+ ++ + + S + +
Sbjct: 96 TTTRRFVGHTKDVLSVAFSADNRQIVSGSRDKTIKLWNTLGVCKYTIQDDSHTEWVSCVR 155
Query: 69 FTGHEQGISDLAT-----IRLWDVPTATSLKTL-IGHTNYVFCINFNPQSNRIVSDTFNE 122
F+ + ++ +++W++ LKT IGHT Y+ + +P + S +
Sbjct: 156 FSPNSSNPIIVSCGWDKMVKVWNLANC-KLKTNHIGHTGYLNTVTVSPDGSLCASGGKDG 214
Query: 123 TIRIWDIKTGKCLKVLPAHSDPVTAIDFN 151
+WD+ GK L L D + A+ F+
Sbjct: 215 QAMLWDLNEGKHLYTLDG-GDTINALCFS 242
Score = 45 (20.9 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 173 TPNGKFILVGTLDNTLRLWNYSTRKILKTYSGY-TNSKYCIS 213
+P+G G D LW+ + K L T G T + C S
Sbjct: 201 SPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDTINALCFS 242
Score = 40 (19.1 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
Identities = 6/22 (27%), Positives = 13/22 (59%)
Query: 185 DNTLRLWNYSTRKILKTYSGYT 206
D +++WN + K+ + G+T
Sbjct: 171 DKMVKVWNLANCKLKTNHIGHT 192
>ZFIN|ZDB-GENE-040426-2855 [details] [associations]
symbol:gnb1b "guanine nucleotide binding protein
(G protein), beta polypeptide 1b" species:7955 "Danio rerio"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632
ZFIN:ZDB-GENE-040426-2855 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 HSSP:P16649 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:CU207276 EMBL:CR854824 EMBL:BC044482
EMBL:BC152684 IPI:IPI00483806 RefSeq:NP_998646.1
RefSeq:XP_003198887.1 UniGene:Dr.26330 SMR:Q803H5 STRING:Q803H5
Ensembl:ENSDART00000015309 Ensembl:ENSDART00000084989
Ensembl:ENSDART00000136035 GeneID:100537780 GeneID:406796
KEGG:dre:100537780 KEGG:dre:406796 CTD:406796 InParanoid:Q803H5
NextBio:20818306 Uniprot:Q803H5
Length = 340
Score = 158 (60.7 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 46/182 (25%), Positives = 76/182 (41%)
Query: 81 TIRLWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPA 140
T LWD+ T T GHT V ++ P + VS + + ++WDI+ G C +
Sbjct: 165 TCALWDIETGQQTTTFAGHTGDVMSLSLAPDTRLFVSGACDASAKLWDIREGMCRQTFTG 224
Query: 141 HSDPVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDN-----TLRLWNYST 195
H + AI F +G T S D R+ D ++V + DN T ++ S
Sbjct: 225 HESDINAICFFPNGNAFATGSDDATCRLFDLRADQE--LMVYSHDNIICGITSVAFSKSG 282
Query: 196 RKILKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDNDRTMK 255
R +L +GY + + T + H + V + +A+G+ D+ +K
Sbjct: 283 RLLL---AGYDDFNCNVWDTLKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDS--FLK 337
Query: 256 IW 257
IW
Sbjct: 338 IW 339
Score = 131 (51.2 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 42/165 (25%), Positives = 75/165 (45%)
Query: 17 QTLNGHLRAVSYVKFSHDGRLLTSSSAEKTLLTYSLSSISNFDSTPPSPLQKFT-GHEQG 75
+TL GHL + + + D RLL S+S + L+ + + + + P T +
Sbjct: 49 RTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPS 108
Query: 76 ISDLATIRLWDVPTATSLKT----------LIGHTNYVFCINFNPQSNRIVSDTFNETIR 125
+ +A L ++ + SLKT L GHT Y+ C F N+IV+ + + T
Sbjct: 109 GNYVACGGLDNICSIYSLKTREGNVRVSRELAGHTGYLSCCRFL-DDNQIVTSSGDTTCA 167
Query: 126 IWDIKTGKCLKVLPAHSDPVTAIDFNRDGTMIVTSSYDGLYRILD 170
+WDI+TG+ H+ V ++ D + V+ + D ++ D
Sbjct: 168 LWDIETGQQTTTFAGHTGDVMSLSLAPDTRLFVSGACDASAKLWD 212
>FB|FBgn0001105 [details] [associations]
symbol:Gbeta13F "G protein beta-subunit 13F" species:7227
"Drosophila melanogaster" [GO:0005834 "heterotrimeric G-protein
complex" evidence=ISS;NAS] [GO:0003924 "GTPase activity"
evidence=ISS;NAS] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=ISS;NAS] [GO:0055059 "asymmetric neuroblast
division" evidence=IMP] [GO:0007015 "actin filament organization"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=TAS] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005886 GO:GO:0005875 GO:GO:0007015
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 ChiTaRS:Gbeta13F EMBL:AE014298 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 GO:GO:0045176
PRINTS:PR00319 GO:GO:0055059 GeneTree:ENSGT00550000074331 KO:K04536
OMA:CMLWDIE InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:M22567
EMBL:AY058566 PIR:A40489 RefSeq:NP_525090.1 RefSeq:NP_727907.1
RefSeq:NP_996459.1 RefSeq:NP_996460.1 RefSeq:NP_996461.1
RefSeq:NP_996462.1 UniGene:Dm.7041 ProteinModelPortal:P26308
SMR:P26308 DIP:DIP-18432N MINT:MINT-1016369 STRING:P26308
PaxDb:P26308 PRIDE:P26308 EnsemblMetazoa:FBtr0074106
EnsemblMetazoa:FBtr0074107 EnsemblMetazoa:FBtr0074108
EnsemblMetazoa:FBtr0074110 EnsemblMetazoa:FBtr0074111
EnsemblMetazoa:FBtr0331597 GeneID:32544 KEGG:dme:Dmel_CG10545
CTD:32544 FlyBase:FBgn0001105 InParanoid:P26308 OrthoDB:EOG4NS1T0
PhylomeDB:P26308 GenomeRNAi:32544 NextBio:779043 Bgee:P26308
GermOnline:CG10545 Uniprot:P26308
Length = 340
Score = 158 (60.7 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 42/179 (23%), Positives = 77/179 (43%)
Query: 84 LWDVPTATSLKTLIGHTNYVFCINFNPQSNRIVSDTFNETIRIWDIKTGKCLKVLPAHSD 143
LWD+ T + + +GHT V ++ PQ VS + + ++WDI+ G C + P H
Sbjct: 168 LWDIETGLQVTSFLGHTGDVMALSLAPQCKTFVSGACDASAKLWDIREGVCKQTFPGHES 227
Query: 144 PVTAIDFNRDGTMIVTSSYDGLYRILDASTPNGKFILVGTLDN-----TLRLWNYSTRKI 198
+ A+ F +G T S D R+ D + + + DN T ++ S R +
Sbjct: 228 DINAVTFFPNGQAFATGSDDATCRLFDIRADQE--LAMYSHDNIICGITSVAFSKSGRLL 285
Query: 199 LKTYSGYTNSKYCISSTFSVTNGKYIVSHRDPVISVASHPAKNIIASGALDNDRTMKIW 257
L +GY + + T + H + V + +A+G+ D+ +++W
Sbjct: 286 L---AGYDDFNCNVWDTMKAERSGILAGHDNRVSCLGVTENGMAVATGSWDS--FLRVW 339
WARNING: HSPs involving 715 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.131 0.387 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 262 262 0.00091 114 3 11 22 0.49 33
32 0.49 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 965
No. of states in DFA: 597 (63 KB)
Total size of DFA: 193 KB (2109 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 25.39u 0.15s 25.54t Elapsed: 00:00:01
Total cpu time: 25.50u 0.16s 25.66t Elapsed: 00:00:01
Start: Mon May 20 21:44:03 2013 End: Mon May 20 21:44:04 2013
WARNINGS ISSUED: 2