BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042147
(69 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZQP2|ACO12_ARATH Putative peroxisomal acyl-coenzyme A oxidase 1.2 OS=Arabidopsis
thaliana GN=ACX1.2 PE=2 SV=1
Length = 664
Score = 132 bits (333), Expect = 5e-31, Method: Composition-based stats.
Identities = 58/69 (84%), Positives = 65/69 (94%)
Query: 1 VRPNAIALVDAFNYTDHYLGSVLGRYDGNVYPKLYEEAWKDPLNDSVVPDGYHEYIRPLL 60
VRPNA+ALVDAF+YTD YLGSVLGRYDGNVYPKL+EEA KDPLNDSVVPDGY EYIRPL+
Sbjct: 596 VRPNAVALVDAFDYTDQYLGSVLGRYDGNVYPKLFEEALKDPLNDSVVPDGYREYIRPLI 655
Query: 61 KQQLRNARL 69
KQ+ R+A+L
Sbjct: 656 KQRFRSAKL 664
>sp|O65202|ACOX1_ARATH Peroxisomal acyl-coenzyme A oxidase 1 OS=Arabidopsis thaliana
GN=ACX1 PE=1 SV=1
Length = 664
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 60/69 (86%), Positives = 65/69 (94%)
Query: 1 VRPNAIALVDAFNYTDHYLGSVLGRYDGNVYPKLYEEAWKDPLNDSVVPDGYHEYIRPLL 60
VRPNA+ALVDAFNYTDHYL SVLGRYDGNVYPKL+EEA KDPLNDSVVPDGY EY+RP+L
Sbjct: 596 VRPNAVALVDAFNYTDHYLNSVLGRYDGNVYPKLFEEALKDPLNDSVVPDGYQEYLRPVL 655
Query: 61 KQQLRNARL 69
+QQLR ARL
Sbjct: 656 QQQLRTARL 664
>sp|Q9Z1N0|ACOX1_CAVPO Peroxisomal acyl-coenzyme A oxidase 1 OS=Cavia porcellus GN=ACOX1
PE=2 SV=1
Length = 661
Score = 84.7 bits (208), Expect = 1e-16, Method: Composition-based stats.
Identities = 38/59 (64%), Positives = 47/59 (79%)
Query: 1 VRPNAIALVDAFNYTDHYLGSVLGRYDGNVYPKLYEEAWKDPLNDSVVPDGYHEYIRPL 59
+RPNA+ALVDAF+Y D LGSVLGRYDGNVY L+E A K PLN + V + YH+Y++PL
Sbjct: 599 IRPNAVALVDAFDYKDITLGSVLGRYDGNVYENLFEWAKKSPLNKTEVHESYHKYLKPL 657
>sp|P07872|ACOX1_RAT Peroxisomal acyl-coenzyme A oxidase 1 OS=Rattus norvegicus GN=Acox1
PE=1 SV=1
Length = 661
Score = 82.0 bits (201), Expect = 1e-15, Method: Composition-based stats.
Identities = 36/59 (61%), Positives = 47/59 (79%)
Query: 1 VRPNAIALVDAFNYTDHYLGSVLGRYDGNVYPKLYEEAWKDPLNDSVVPDGYHEYIRPL 59
+RPNA+ALVDAF++ D LGSVLGRYDGNVY L+E A K PLN + V + YH++++PL
Sbjct: 599 IRPNAVALVDAFDFKDMTLGSVLGRYDGNVYENLFEWAKKSPLNKTEVHESYHKHLKPL 657
>sp|Q9R0H0|ACOX1_MOUSE Peroxisomal acyl-coenzyme A oxidase 1 OS=Mus musculus GN=Acox1 PE=1
SV=5
Length = 661
Score = 78.2 bits (191), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/58 (60%), Positives = 46/58 (79%)
Query: 2 RPNAIALVDAFNYTDHYLGSVLGRYDGNVYPKLYEEAWKDPLNDSVVPDGYHEYIRPL 59
RPNA+ALVDAF++ D LGSVLGRYDGNVY L+E A K PLN + V + Y+++++PL
Sbjct: 600 RPNAVALVDAFDFKDVTLGSVLGRYDGNVYENLFEWAKKSPLNKTEVHESYYKHLKPL 657
>sp|Q8HYL8|ACOX1_PHACI Peroxisomal acyl-coenzyme A oxidase 1 OS=Phascolarctos cinereus
GN=ACOX1 PE=1 SV=2
Length = 661
Score = 75.5 bits (184), Expect = 8e-14, Method: Composition-based stats.
Identities = 33/59 (55%), Positives = 45/59 (76%)
Query: 1 VRPNAIALVDAFNYTDHYLGSVLGRYDGNVYPKLYEEAWKDPLNDSVVPDGYHEYIRPL 59
+RP + ALVDAF++ D LGSVLGRYDGN+Y ++E A K PLN S V + YH++++PL
Sbjct: 599 IRPESAALVDAFDFQDVSLGSVLGRYDGNIYENMFEWAKKSPLNKSEVHESYHKHLKPL 657
>sp|Q3SZP5|ACOX1_BOVIN Peroxisomal acyl-coenzyme A oxidase 1 OS=Bos taurus GN=ACOX1 PE=2
SV=1
Length = 660
Score = 70.1 bits (170), Expect = 4e-12, Method: Composition-based stats.
Identities = 32/52 (61%), Positives = 40/52 (76%)
Query: 1 VRPNAIALVDAFNYTDHYLGSVLGRYDGNVYPKLYEEAWKDPLNDSVVPDGY 52
+RP+A+ALVDAF++ D LGSVLGRYDGNVY L+E A K PLN + V + Y
Sbjct: 599 IRPDAVALVDAFDFQDVTLGSVLGRYDGNVYENLFEWAKKSPLNKTEVHESY 650
>sp|Q7KML2|ACOX1_DROME Probable peroxisomal acyl-coenzyme A oxidase 1 OS=Drosophila
melanogaster GN=CG5009 PE=1 SV=1
Length = 669
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 42/63 (66%)
Query: 2 RPNAIALVDAFNYTDHYLGSVLGRYDGNVYPKLYEEAWKDPLNDSVVPDGYHEYIRPLLK 61
RPNA++LVD+F+ D L S LG YDGNVY ++E K+PLN V +H+Y++P +K
Sbjct: 607 RPNAVSLVDSFDLHDRVLDSALGAYDGNVYEHIFESTKKNPLNKEPVNGAFHKYLKPFMK 666
Query: 62 QQL 64
L
Sbjct: 667 AHL 669
>sp|Q99424|ACOX2_HUMAN Peroxisomal acyl-coenzyme A oxidase 2 OS=Homo sapiens GN=ACOX2 PE=1
SV=1
Length = 681
Score = 67.4 bits (163), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/61 (54%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 1 VRPNAIALVDAFNYTDHYLGSVLGRYDGNVYPKLYEEAWKDPLNDSVVPDGYHEYIRPLL 60
+R +AI L DAF++TD L S LG YDGNVY +L++ A K P N P Y EYIRPLL
Sbjct: 616 IRKDAILLTDAFDFTDQCLNSALGCYDGNVYERLFQWAQKSPTNTQENP-AYEEYIRPLL 674
Query: 61 K 61
+
Sbjct: 675 Q 675
>sp|O02767|ACOX2_RABIT Peroxisomal acyl-coenzyme A oxidase 2 OS=Oryctolagus cuniculus
GN=ACOX2 PE=1 SV=1
Length = 681
Score = 65.1 bits (157), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/66 (48%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 1 VRPNAIALVDAFNYTDHYLGSVLGRYDGNVYPKLYEEAWKDPLNDSVVPDGYHEYIRPLL 60
+R +AI L DAF++TD L S LG YDGNVY +L+E A + P N P Y +YI+PLL
Sbjct: 616 IRKDAILLTDAFDFTDQCLNSALGCYDGNVYERLFEWAQRSPTNTQENP-AYKKYIQPLL 674
Query: 61 KQQLRN 66
+ N
Sbjct: 675 QSWRSN 680
>sp|Q15067|ACOX1_HUMAN Peroxisomal acyl-coenzyme A oxidase 1 OS=Homo sapiens GN=ACOX1 PE=1
SV=3
Length = 660
Score = 64.7 bits (156), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/52 (57%), Positives = 38/52 (73%)
Query: 1 VRPNAIALVDAFNYTDHYLGSVLGRYDGNVYPKLYEEAWKDPLNDSVVPDGY 52
+R +A+ALVDAF++ D LGSVLGRYDGNVY L+E A PLN + V + Y
Sbjct: 599 IRSDAVALVDAFDFQDVTLGSVLGRYDGNVYENLFEWAKNSPLNKAEVHESY 650
>sp|Q9QXD1|ACOX2_MOUSE Peroxisomal acyl-coenzyme A oxidase 2 OS=Mus musculus GN=Acox2 PE=1
SV=2
Length = 681
Score = 64.3 bits (155), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/61 (50%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 1 VRPNAIALVDAFNYTDHYLGSVLGRYDGNVYPKLYEEAWKDPLNDSVVPDGYHEYIRPLL 60
+R +AI L DAF+++DH L S LG YDG+VY +L+E A K P N P Y +YIRPL+
Sbjct: 616 IRKDAILLTDAFDFSDHCLNSALGCYDGHVYQRLFEWAQKSPANTQENP-AYKKYIRPLM 674
Query: 61 K 61
+
Sbjct: 675 Q 675
>sp|Q5RC19|ACOX1_PONAB Peroxisomal acyl-coenzyme A oxidase 1 OS=Pongo abelii GN=ACOX1 PE=2
SV=2
Length = 660
Score = 64.3 bits (155), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/52 (57%), Positives = 38/52 (73%)
Query: 1 VRPNAIALVDAFNYTDHYLGSVLGRYDGNVYPKLYEEAWKDPLNDSVVPDGY 52
+R +A+ALVDAF++ D LGSVLGRYDGNVY L+E A PLN + V + Y
Sbjct: 599 IRSDAVALVDAFDFQDVTLGSVLGRYDGNVYENLFEWAKNSPLNKAEVHESY 650
>sp|Q54GQ6|ACOX1_DICDI Peroxisomal acyl-coenzyme A oxidase 1 OS=Dictyostelium discoideum
GN=acox1 PE=3 SV=1
Length = 700
Score = 63.9 bits (154), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 43/64 (67%)
Query: 1 VRPNAIALVDAFNYTDHYLGSVLGRYDGNVYPKLYEEAWKDPLNDSVVPDGYHEYIRPLL 60
+RPN + LVD+F+ + LGS LG Y+G+VY LY+ A P N + +P G++E I+PL+
Sbjct: 637 LRPNLVPLVDSFDLCNTTLGSALGSYNGDVYSTLYKWASTQPFNKNSLPLGFNETIKPLI 696
Query: 61 KQQL 64
+L
Sbjct: 697 NSKL 700
>sp|P97562|ACOX2_RAT Peroxisomal acyl-coenzyme A oxidase 2 OS=Rattus norvegicus GN=Acox2
PE=1 SV=1
Length = 681
Score = 63.5 bits (153), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 1 VRPNAIALVDAFNYTDHYLGSVLGRYDGNVYPKLYEEAWKDPLNDSVVPDGYHEYIRPLL 60
+R +AI L DAF+++DH L S LG YDG+VY +L+E A K P N P Y +YIRPL+
Sbjct: 616 IRKDAILLTDAFDFSDHCLNSALGCYDGHVYERLFEWAQKYPANTQENP-AYKKYIRPLM 674
>sp|P34355|ACOX_CAEEL Probable peroxisomal acyl-coenzyme A oxidase OS=Caenorhabditis
elegans GN=C48B4.1 PE=3 SV=1
Length = 659
Score = 53.5 bits (127), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 2 RPNAIALVDAFNYTDHYLGSVLGRYDGNVYPKLYEEAWKDPLNDSVVPDGYHEYIRPL 59
R NA+++VD+F+ D L SVLGR DG+VY LY+ A PLN+ +P +Y++P+
Sbjct: 599 RRNAVSIVDSFDICDRELRSVLGRRDGHVYENLYKWAQMSPLNERNLPH-VEKYLKPM 655
>sp|P08790|ACOX5_CANTR Acyl-coenzyme A oxidase 5 OS=Candida tropicalis GN=POX5 PE=3 SV=3
Length = 662
Score = 47.4 bits (111), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 23/36 (63%)
Query: 1 VRPNAIALVDAFNYTDHYLGSVLGRYDGNVYPKLYE 36
VRPN + L D FN TD + +GRYDGNVY +E
Sbjct: 581 VRPNVVGLTDGFNLTDMMTNAAIGRYDGNVYEHYFE 616
>sp|Q6BRD5|ACOX_DEBHA Acyl-coenzyme A oxidase OS=Debaryomyces hansenii (strain ATCC 36239
/ CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=POX1
PE=3 SV=2
Length = 706
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 1 VRPNAIALVDAFNYTDHYLGSVLGRYDGNVYPKLY 35
+RPN IAL D+F +D + S +G YDGN+Y +
Sbjct: 625 IRPNVIALTDSFQQSDMMINSAIGSYDGNIYENYF 659
>sp|O74934|ACOX1_YARLI Acyl-coenzyme A oxidase 1 OS=Yarrowia lipolytica (strain CLIB 122 /
E 150) GN=POX1 PE=1 SV=1
Length = 689
Score = 43.1 bits (100), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 31/60 (51%)
Query: 1 VRPNAIALVDAFNYTDHYLGSVLGRYDGNVYPKLYEEAWKDPLNDSVVPDGYHEYIRPLL 60
VR I L DAF +D ++ + +G YDGNVY K + + + + P Y ++P L
Sbjct: 616 VRDQVIGLTDAFGLSDFFINAPIGSYDGNVYEKYFAKVNQQNPATNPRPPYYESTLKPFL 675
>sp|P11356|ACOX2_CANTR Acyl-coenzyme A oxidase 2 OS=Candida tropicalis GN=POX2 PE=3 SV=3
Length = 724
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 1 VRPNAIALVDAFNYTDHYLGSVLGRYDGNVYPKLYEEAWKDPLNDSVVPDGYHEYIRPLL 60
+RP I L D+F D+++ S++G+YDGN+Y Y E+ KD + S Y E + +L
Sbjct: 643 IRPYVIGLTDSFQQPDNFINSLIGKYDGNIYTN-YLESVKDVNDPSNYKAPYSEALEAML 701
>sp|P06598|ACOX4_CANTR Acyl-coenzyme A oxidase 4 OS=Candida tropicalis GN=POX4 PE=2 SV=3
Length = 709
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 1 VRPNAIALVDAFNYTDHYLGSVLGRYDGNVYPKLYE 36
VRPN +A D+F +D + S +GRYDG++Y ++
Sbjct: 628 VRPNVVAYTDSFQQSDMIVNSAIGRYDGDIYENYFD 663
>sp|P05335|ACOX4_CANMA Acyl-coenzyme A oxidase 4 OS=Candida maltosa GN=POX4 PE=3 SV=3
Length = 709
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 1 VRPNAIALVDAFNYTDHYLGSVLGRYDGNVYPKLYE 36
VRPN +A D+F +D + S +G+YDG+VY ++
Sbjct: 628 VRPNVVAYTDSFQQSDMVINSAIGKYDGDVYENYFD 663
>sp|Q00468|ACOX2_CANMA Acyl-coenzyme A oxidase 2 OS=Candida maltosa GN=POX2 PE=3 SV=1
Length = 724
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 1 VRPNAIALVDAFNYTDHYLGSVLGRYDGNVY 31
+RP I L D+F D+++ S++GRYDGNVY
Sbjct: 643 IRPYVIGLTDSFQQPDNFINSLIGRYDGNVY 673
>sp|Q9Y7B1|ACOX_PICPA Acyl-coenzyme A oxidase OS=Komagataella pastoris GN=POX1 PE=3 SV=1
Length = 719
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 1 VRPNAIALVDAFNYTDHYLGSVLGRYDGNVYPKLYEEAWKDPLNDSVVPDG---YHEYIR 57
VR I L D+F ++D+++ S LG + G++Y ++ + LN+ V DG Y E +
Sbjct: 634 VRDQVIGLTDSFQFSDYFINSALGSHSGDIYNTYFDTV--NNLNNPQVRDGKAAYSEALE 691
Query: 58 PLLKQ 62
+L++
Sbjct: 692 AMLRR 696
>sp|Q6FY63|ACOX_CANGA Acyl-coenzyme A oxidase OS=Candida glabrata (strain ATCC 2001 / CBS
138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=POX1 PE=3
SV=1
Length = 748
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
Query: 1 VRPNAIALVDAFNYTDHYLGSVLGRYDGNVYPKLYEEAWKDPLNDSVVPDG-----YHEY 55
+R I+L D+F + D L + +G YDG++Y + E K N+ V DG YHE
Sbjct: 664 IRKECISLTDSFKWPDGMLNAPIGYYDGDIYHNYFNEVVK---NNPVEKDGAGIPPYHEL 720
Query: 56 IRPLLKQQLRNARL 69
+ +L + ARL
Sbjct: 721 LANMLTRGDEFARL 734
>sp|Q6CKK7|ACOX_KLULA Acyl-coenzyme A oxidase OS=Kluyveromyces lactis (strain ATCC 8585 /
CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)
GN=POX1 PE=3 SV=1
Length = 736
Score = 37.7 bits (86), Expect = 0.023, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 1 VRPNAIALVDAFNYTDHYLGSVLGRYDGNVYPKLYEEAWKDPLNDSVVPDG 51
+R IAL DAF D + + +G YDG++Y + E N+ + PDG
Sbjct: 652 IRKECIALTDAFKLPDAMINAPIGYYDGDIYHNYFNEVTN---NNKLEPDG 699
>sp|O74935|ACOX2_YARLI Acyl-coenzyme A oxidase 2 OS=Yarrowia lipolytica (strain CLIB 122 /
E 150) GN=POX2 PE=1 SV=1
Length = 700
Score = 37.4 bits (85), Expect = 0.028, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 1 VRPNAIALVDAFNYTDHYLGSVLGRYDGNVYPKLYEEA-WKDPLNDSVVPDGYHEYIRPL 59
VR I DAFN +D+++ + +G YDG+ Y +++ ++P D P Y ++P
Sbjct: 626 VREEVIGYTDAFNLSDYFINAPIGCYDGDAYRHYFQKVNEQNPARDP-RPPYYASTLKPF 684
Query: 60 L 60
L
Sbjct: 685 L 685
>sp|P13711|ACOX_YEAST Acyl-coenzyme A oxidase OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=POX1 PE=1 SV=2
Length = 748
Score = 36.2 bits (82), Expect = 0.054, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 8/65 (12%)
Query: 1 VRPNAIALVDAFNYTDHYLGSVLGRYDGNVYPKLYEEAWKDPLNDSVVPDG-----YHEY 55
VR + I L D+F D L S +G +DG++Y + E + N+ V DG YH
Sbjct: 663 VRKDCIGLTDSFELPDAMLNSPIGYFDGDIYHNYFNEVCR---NNPVEADGAGKPSYHAL 719
Query: 56 IRPLL 60
+ +L
Sbjct: 720 LSSML 724
>sp|O74936|ACOX3_YARLI Acyl-coenzyme A oxidase 3 OS=Yarrowia lipolytica (strain CLIB 122 /
E 150) GN=POX3 PE=1 SV=1
Length = 700
Score = 35.8 bits (81), Expect = 0.071, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 28/60 (46%)
Query: 1 VRPNAIALVDAFNYTDHYLGSVLGRYDGNVYPKLYEEAWKDPLNDSVVPDGYHEYIRPLL 60
VR DAF +D ++ + +G YDG+VY + + + + P Y +RP L
Sbjct: 626 VRDQVAGYTDAFGLSDWFINAPIGNYDGDVYKHYFAKVNQQNPAQNPRPPYYESTLRPFL 685
>sp|Q63448|ACOX3_RAT Peroxisomal acyl-coenzyme A oxidase 3 OS=Rattus norvegicus GN=Acox3
PE=1 SV=1
Length = 700
Score = 35.8 bits (81), Expect = 0.079, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 24/35 (68%)
Query: 1 VRPNAIALVDAFNYTDHYLGSVLGRYDGNVYPKLY 35
++ +A+ALVDA +D LGS +GR DG +Y L+
Sbjct: 633 LKDDAVALVDAIAPSDFVLGSPIGRADGELYKNLW 667
>sp|Q756A9|ACOX_ASHGO Acyl-coenzyme A oxidase OS=Ashbya gossypii (strain ATCC 10895 / CBS
109.51 / FGSC 9923 / NRRL Y-1056) GN=POX1 PE=3 SV=2
Length = 733
Score = 33.5 bits (75), Expect = 0.36, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 23/37 (62%)
Query: 1 VRPNAIALVDAFNYTDHYLGSVLGRYDGNVYPKLYEE 37
++ +AI L DAF+ D + S +G YDG++Y + +
Sbjct: 652 IKTHAIRLTDAFHLPDAVINSSIGNYDGDIYHNYFND 688
>sp|P0A9R1|DHAS_SHIFL Aspartate-semialdehyde dehydrogenase OS=Shigella flexneri GN=asd
PE=3 SV=1
Length = 367
Score = 30.4 bits (67), Expect = 3.1, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 22/57 (38%), Gaps = 20/57 (35%)
Query: 24 GRYDGNVYPKLYEEAWK--------------------DPLNDSVVPDGYHEYIRPLL 60
G Y +YPKL E W+ DP+N V+ DG + IR +
Sbjct: 75 GDYTNEIYPKLRESGWQGYWIDAASSLRMKDDAIIILDPVNQDVITDGLNNGIRTFV 131
>sp|P0A9Q9|DHAS_ECOLI Aspartate-semialdehyde dehydrogenase OS=Escherichia coli (strain
K12) GN=asd PE=1 SV=1
Length = 367
Score = 30.4 bits (67), Expect = 3.1, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 22/57 (38%), Gaps = 20/57 (35%)
Query: 24 GRYDGNVYPKLYEEAWK--------------------DPLNDSVVPDGYHEYIRPLL 60
G Y +YPKL E W+ DP+N V+ DG + IR +
Sbjct: 75 GDYTNEIYPKLRESGWQGYWIDAASSLRMKDDAIIILDPVNQDVITDGLNNGIRTFV 131
>sp|Q8FCR6|DHAS_ECOL6 Aspartate-semialdehyde dehydrogenase OS=Escherichia coli O6:H1
(strain CFT073 / ATCC 700928 / UPEC) GN=asd PE=3 SV=2
Length = 367
Score = 30.4 bits (67), Expect = 3.1, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 22/57 (38%), Gaps = 20/57 (35%)
Query: 24 GRYDGNVYPKLYEEAWK--------------------DPLNDSVVPDGYHEYIRPLL 60
G Y +YPKL E W+ DP+N V+ DG + IR +
Sbjct: 75 GDYTNEIYPKLRESGWQGYWIDAASSLRMKDDAIIILDPVNQDVITDGLNNGIRTFV 131
>sp|P0A9R0|DHAS_ECO57 Aspartate-semialdehyde dehydrogenase OS=Escherichia coli O157:H7
GN=asd PE=3 SV=1
Length = 367
Score = 30.4 bits (67), Expect = 3.1, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 22/57 (38%), Gaps = 20/57 (35%)
Query: 24 GRYDGNVYPKLYEEAWK--------------------DPLNDSVVPDGYHEYIRPLL 60
G Y +YPKL E W+ DP+N V+ DG + IR +
Sbjct: 75 GDYTNEIYPKLRESGWQGYWIDAASSLRMKDDAIIILDPVNQDVITDGLNNGIRTFV 131
>sp|Q5RAU0|ACOX3_PONAB Peroxisomal acyl-coenzyme A oxidase 3 OS=Pongo abelii GN=ACOX3 PE=2
SV=1
Length = 700
Score = 30.4 bits (67), Expect = 3.7, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 1 VRPNAIALVDAFNYTDHYLGSVLGRYDGNVYPKLY 35
++ +A+ALVD D L S +GR DG +Y L+
Sbjct: 633 LKDDAVALVDVIAPPDFILDSPIGRADGELYKNLW 667
>sp|O15254|ACOX3_HUMAN Peroxisomal acyl-coenzyme A oxidase 3 OS=Homo sapiens GN=ACOX3 PE=1
SV=2
Length = 700
Score = 30.4 bits (67), Expect = 3.8, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 1 VRPNAIALVDAFNYTDHYLGSVLGRYDGNVYPKLY 35
++ +A+ALVD D L S +GR DG +Y L+
Sbjct: 633 LKDDAVALVDVIAPPDFVLDSPIGRADGELYKNLW 667
>sp|Q4WFT3|GUAA_ASPFU GMP synthase [glutamine-hydrolyzing] OS=Neosartorya fumigata
(strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=gua1 PE=3 SV=1
Length = 557
Score = 30.0 bits (66), Expect = 4.6, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 21/37 (56%)
Query: 15 TDHYLGSVLGRYDGNVYPKLYEEAWKDPLNDSVVPDG 51
TDH LG+V G D V KL +EA D + +V +G
Sbjct: 230 TDHVLGAVSGGVDSTVAAKLMKEAIGDRFHAVLVNNG 266
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.141 0.438
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,268,983
Number of Sequences: 539616
Number of extensions: 1124600
Number of successful extensions: 2115
Number of sequences better than 100.0: 38
Number of HSP's better than 100.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 2076
Number of HSP's gapped (non-prelim): 38
length of query: 69
length of database: 191,569,459
effective HSP length: 41
effective length of query: 28
effective length of database: 169,445,203
effective search space: 4744465684
effective search space used: 4744465684
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)