Query 042152
Match_columns 256
No_of_seqs 206 out of 1176
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 05:14:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042152.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042152hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gp6_A Leucoanthocyanidin diox 100.0 1.2E-67 4E-72 476.0 20.5 240 1-241 80-350 (356)
2 1w9y_A 1-aminocyclopropane-1-c 100.0 2.6E-67 8.8E-72 467.2 12.7 244 1-251 34-309 (319)
3 3oox_A Putative 2OG-Fe(II) oxy 100.0 1.9E-65 6.6E-70 454.3 21.9 235 1-236 36-309 (312)
4 1dcs_A Deacetoxycephalosporin 100.0 1.2E-62 4E-67 436.0 12.7 229 1-237 32-306 (311)
5 1odm_A Isopenicillin N synthas 100.0 1.1E-60 3.7E-65 426.9 19.4 224 1-236 42-324 (331)
6 3on7_A Oxidoreductase, iron/as 100.0 6.7E-57 2.3E-61 393.6 17.6 209 1-236 28-277 (280)
7 2hbt_A EGL nine homolog 1; pro 93.9 0.27 9.2E-06 41.1 8.9 81 103-199 119-213 (247)
8 2rg4_A Uncharacterized protein 93.5 0.31 1E-05 39.9 8.3 43 147-201 166-209 (216)
9 3dkq_A PKHD-type hydroxylase S 92.6 0.42 1.4E-05 39.9 8.0 80 101-198 99-194 (243)
10 2iuw_A Alkylated repair protei 88.7 2 6.8E-05 35.6 8.5 84 100-198 125-229 (238)
11 3s57_A Alpha-ketoglutarate-dep 88.5 1.8 6.3E-05 34.9 8.0 81 101-196 100-200 (204)
12 3i3q_A Alpha-ketoglutarate-dep 85.6 2.8 9.5E-05 34.1 7.5 80 101-197 105-201 (211)
13 3tht_A Alkylated DNA repair pr 83.0 2.9 9.9E-05 36.6 7.0 95 100-201 197-315 (345)
14 2jig_A Prolyl-4 hydroxylase; h 76.5 5 0.00017 32.5 6.0 89 102-200 99-218 (224)
15 3itq_A Prolyl 4-hydroxylase, a 74.5 8.2 0.00028 31.4 6.8 87 102-199 112-212 (216)
16 1e5r_A Proline oxidase; oxidor 48.4 25 0.00084 29.9 5.1 65 119-197 103-175 (290)
17 3rcq_A Aspartyl/asparaginyl be 43.2 44 0.0015 26.6 5.6 67 118-201 113-186 (197)
18 2ww6_A Fibritin, T4 fibritin; 41.8 21 0.00073 18.7 2.3 13 141-153 12-24 (27)
19 3kt7_A PKHD-type hydroxylase T 25.8 2.5E+02 0.0084 26.5 8.3 81 103-198 126-227 (633)
20 2p17_A Pirin-like protein; GK1 24.5 54 0.0019 27.4 3.4 21 114-134 48-68 (277)
21 2vf9_A Coat protein; virion, R 24.1 15 0.00053 25.6 -0.1 18 167-184 49-66 (131)
22 1zrr_A E-2/E-2' protein; nicke 23.0 2.1E+02 0.0073 22.0 6.4 63 120-199 95-159 (179)
23 2a1x_A Phytanoyl-COA dioxygena 21.1 2.7E+02 0.0093 22.8 7.2 29 178-207 232-261 (308)
No 1
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=1.2e-67 Score=475.99 Aligned_cols=240 Identities=36% Similarity=0.652 Sum_probs=217.5
Q ss_pred CEEeccCCCHHHHHHHHHHHHHHhCCCHHHHhccccCC--CceeeccccccccccccCCcccccccccCcccccCCCCCC
Q 042152 1 MQLKSHGVSSSLVEKVTAEVHDFFDLPMEEREKFWQRP--GEIEGFGQNFVVSKEQKLDWGYGFTMFSLPALLRKPHLFP 78 (256)
Q Consensus 1 F~l~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~--~~~~Gy~~~~~~~~~~~~d~~e~~~~~~~p~~~~~~~~wP 78 (256)
|||+||||+.++++++++++++||+||.|+|+++.... ..++||+........+..||+|.|.++..|.....+|.||
T Consensus 80 F~v~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~~p~~~~~~~~wP 159 (356)
T 1gp6_A 80 MHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWP 159 (356)
T ss_dssp EEEESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSC
T ss_pred EEEeCCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheeeeecCCccccccccCC
Confidence 89999999999999999999999999999999998764 3689998765555567889999999886665445678999
Q ss_pred CCCcc------------------------cccCCCCCC-ccccc---cCceeeeeeeeCCCCccccccccccccCCCcEE
Q 042152 79 KLPLP------------------------SALKMDPND-SKQFE---DGVQSMRMNYYPSCQQQEHVIGFNPHTDGSALT 130 (256)
Q Consensus 79 ~~~~~------------------------~~Lgl~~~~-~~~~~---~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~~~lT 130 (256)
+.++. ++|||++++ .+.+. .+.+.||++|||||++++..+|+++|||+|+||
T Consensus 160 ~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lT 239 (356)
T 1gp6_A 160 KTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALT 239 (356)
T ss_dssp CSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEE
T ss_pred CcchhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcccCCccceeeeeecCCCCCcccccCcCCccCCCeEE
Confidence 86543 889999998 77776 467899999999999988889999999999999
Q ss_pred EEEeCCCCCceEEeeCCeeEeccCCCCeEEEEcCchhHHhhCCcccCcCceeccCCCCCeEEEEEeeeCCCCc-eEecCC
Q 042152 131 ILLQLNEMDGLQIKKDGMRVPVKTLPDTFIINVGENLEILTNGIYRSIVHRATVNSEKARLSFATFYSMKLDG-EIGPAP 209 (256)
Q Consensus 131 lL~q~~~v~GLqV~~~g~W~~V~p~pg~lvVnvGd~L~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~p~~d~-~i~pl~ 209 (256)
||+| |+++||||+++|+|++|+|+||+|||||||+||+||||+||||+|||+.+++.+|||++||++|+.|+ +|.|++
T Consensus 240 lL~q-d~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~~i~pl~ 318 (356)
T 1gp6_A 240 FILH-NMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLP 318 (356)
T ss_dssp EEEE-CSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCG
T ss_pred EEEE-cCCCCeEEecCCcEEECcCCCCeEEEEeccHHHHhcCCEeeccCceecCCCCCCEEEEEEeecCCCCCcEEeCCh
Confidence 9999 67999999999999999999999999999999999999999999999999889999999999999999 999999
Q ss_pred CCCCCCCCCccccccHHHHHHHHHhcccccCc
Q 042152 210 SLITPETPALFKKISFVDYTKGFLSRKLQEKS 241 (256)
Q Consensus 210 ~~~~~~~~~~y~~~~~~ey~~~~~~~~~~~~~ 241 (256)
+|+++++|++|+++|++||+..++..+++++.
T Consensus 319 ~~~~~~~p~~y~~~t~~eyl~~~~~~~~d~~~ 350 (356)
T 1gp6_A 319 EMVSVESPAKFPPRTFAQHIEHKLFGKEQEEL 350 (356)
T ss_dssp GGCCSSSCCSSCCEEHHHHHHHHHHHHHHHHC
T ss_pred hhcCCCCCccCCCccHHHHHHHHHHhccCcch
Confidence 99999899999999999999999988766654
No 2
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=2.6e-67 Score=467.17 Aligned_cols=244 Identities=27% Similarity=0.494 Sum_probs=210.5
Q ss_pred CEEeccCCCHHHHHHHHHHHHHHhCCCHHHHhccccCCCceeeccccccccccccCCcccccccccCcccccCCCCCCCC
Q 042152 1 MQLKSHGVSSSLVEKVTAEVHDFFDLPMEEREKFWQRPGEIEGFGQNFVVSKEQKLDWGYGFTMFSLPALLRKPHLFPKL 80 (256)
Q Consensus 1 F~l~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~Gy~~~~~~~~~~~~d~~e~~~~~~~p~~~~~~~~wP~~ 80 (256)
|||+||||+.++++++++++++||+||.|+|+++... .+||+... .+.+..||+|.|+++..|. ..+|.||+.
T Consensus 34 F~v~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~---~~Gy~~~~--~e~~~~d~ke~~~~~~~p~--~~~~~wP~~ 106 (319)
T 1w9y_A 34 FELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVA---SKALEGVQ--AEVTDMDWESTFFLKHLPI--SNISEVPDL 106 (319)
T ss_dssp EEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHTTCC--CCGGGCCCCEEEEEEEESC--CGGGGCTTC
T ss_pred EEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccC---CCCCCccc--ccCCCCChhhheeeecCCc--ccccccccc
Confidence 8999999999999999999999999999999998643 35886542 2346789999999876553 246889986
Q ss_pred Ccc------------------------cccCCCCCC-cccccc---CceeeeeeeeCCCCccccccccccccCCCcEEEE
Q 042152 81 PLP------------------------SALKMDPND-SKQFED---GVQSMRMNYYPSCQQQEHVIGFNPHTDGSALTIL 132 (256)
Q Consensus 81 ~~~------------------------~~Lgl~~~~-~~~~~~---~~~~lr~~~Yp~~~~~~~~~g~~~HtD~~~lTlL 132 (256)
++. ++|||++++ .+.+.. +.+.||++|||||++++..+|+++|||+|+||||
T Consensus 107 ~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL 186 (319)
T 1w9y_A 107 DEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILL 186 (319)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHHHHTTTCCEEEEEEEECCCCSCGGGGSSCCCBCCSSSEEEE
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCcCCccceeEEEecCCCcccccccccccccCCCceEEE
Confidence 543 889999998 777763 5678999999999999888999999999999999
Q ss_pred EeCCCCCceEEeeCCeeEeccCCCCeEEEEcCchhHHhhCCcccCcCceeccCCCCCeEEEEEeeeCCCCceEecCCCCC
Q 042152 133 LQLNEMDGLQIKKDGMRVPVKTLPDTFIINVGENLEILTNGIYRSIVHRATVNSEKARLSFATFYSMKLDGEIGPAPSLI 212 (256)
Q Consensus 133 ~q~~~v~GLqV~~~g~W~~V~p~pg~lvVnvGd~L~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~p~~d~~i~pl~~~~ 212 (256)
+||++++||||+++|+|++|+|+||++||||||+||+||||+||||.|||+++++.+|+|++||++|+.|++|.|+++|+
T Consensus 187 ~qd~~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~SnG~~kS~~HRVv~~~~~~R~Sia~F~~p~~d~~i~pl~~l~ 266 (319)
T 1w9y_A 187 FQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQKDGARMSLASFYNPGSDAVIYPAPALV 266 (319)
T ss_dssp EESSSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSSCCEEEEEEEECCTTCEECCCGGGC
T ss_pred EecCCCCeeeEeeCCeEEEcccCCCcEEEEhHHHHHHHhCCeeecccceecCCCCCCceEEEEEecCCCCCeEeCchhhc
Confidence 99547999999999999999999999999999999999999999999999999889999999999999999999999999
Q ss_pred CCC---CCCccccccHHHHHHHHHhcccccCcc-cceeeeecc
Q 042152 213 TPE---TPALFKKISFVDYTKGFLSRKLQEKSN-VDFMRIENE 251 (256)
Q Consensus 213 ~~~---~~~~y~~~~~~ey~~~~~~~~~~~~~~-~~~~~~~~~ 251 (256)
+++ +|++|+++|++||+..+++..+.++.. ++.+|+..+
T Consensus 267 ~~~~~~~p~~Y~~~t~~ey~~~~~~~~~~~~~~~~~~~~~~~~ 309 (319)
T 1w9y_A 267 EKEAEENKQVYPKFVFDDYMKLYAGLKFQAKEPRFEAMKAMET 309 (319)
T ss_dssp --------CCCCCEEHHHHHHTTTTTTCSSHHHHHHHHHHC--
T ss_pred CcccccCccccCcEeHHHHHHHHHhhhcCcchhHHHHHHHHhh
Confidence 987 599999999999999999988877764 677776533
No 3
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=1.9e-65 Score=454.30 Aligned_cols=235 Identities=23% Similarity=0.350 Sum_probs=204.3
Q ss_pred CEEeccCCCHHHHHHHHHHHHHHhCCCHHHHhccccCCCceeecccccccc--ccccCCcccccccccC-cc-----ccc
Q 042152 1 MQLKSHGVSSSLVEKVTAEVHDFFDLPMEEREKFWQRPGEIEGFGQNFVVS--KEQKLDWGYGFTMFSL-PA-----LLR 72 (256)
Q Consensus 1 F~l~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~Gy~~~~~~~--~~~~~d~~e~~~~~~~-p~-----~~~ 72 (256)
|||+||||+.++++++++++++||+||.|+|+++.......+||...+.+. .....||+|.|.++.. +. ...
T Consensus 36 f~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~Gy~~~g~e~~~~~~~~D~kE~~~~~~~~~~~~~~~~~~ 115 (312)
T 3oox_A 36 AVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGVKGGARGYIPFGVETAKGADHYDLKEFWHMGRDLPPGHRFRAHM 115 (312)
T ss_dssp EEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSSGGGTSEEECCCCCCSTTSCSCCCCEEEEECCCCCTTCGGGGTS
T ss_pred EEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccCCCCccccccccceecCCCCCCCceeeeEeecCCCcCCcchhcc
Confidence 899999999999999999999999999999999987545679997644332 2356899999987642 11 123
Q ss_pred CCCCCCCCCcc------------------------cccCCCCCC-ccccccCceeeeeeeeCCCCccccccccccccCCC
Q 042152 73 KPHLFPKLPLP------------------------SALKMDPND-SKQFEDGVQSMRMNYYPSCQQQEHVIGFNPHTDGS 127 (256)
Q Consensus 73 ~~~~wP~~~~~------------------------~~Lgl~~~~-~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~~ 127 (256)
.+|.||+.++. ++|||++++ .+.+..+.+.||++|||||++++..+|+++|||+|
T Consensus 116 ~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~g 195 (312)
T 3oox_A 116 ADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLERDFFKPTVQDGNSVLRLLHYPPIPKDATGVRAGAHGDIN 195 (312)
T ss_dssp CCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTTHHHHTTCCCEEEEEEECCCSSCCC--CEEEECCCS
T ss_pred CCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHhcCCcceeeeEecCCCCCCcCCcCccceecCc
Confidence 47899987543 889999998 88888888899999999999765559999999999
Q ss_pred cEEEEEeCCCCCceEEe-eCCeeEeccCCCCeEEEEcCchhHHhhCCcccCcCceeccCC----CCCeEEEEEeeeCCCC
Q 042152 128 ALTILLQLNEMDGLQIK-KDGMRVPVKTLPDTFIINVGENLEILTNGIYRSIVHRATVNS----EKARLSFATFYSMKLD 202 (256)
Q Consensus 128 ~lTlL~q~~~v~GLqV~-~~g~W~~V~p~pg~lvVnvGd~L~~~TnG~~ks~~HRV~~~~----~~~R~Si~~F~~p~~d 202 (256)
+||||+| |+++||||+ ++|+|++|+|+||++||||||+||+||||+||||+|||++++ +.+|||++||++|+.|
T Consensus 196 ~lTlL~q-d~v~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~TnG~~kS~~HRVv~~~~~~~~~~R~Sia~F~~P~~d 274 (312)
T 3oox_A 196 TITLLLG-AEEGGLEVLDRDGQWLPINPPPGCLVINIGDMLERLTNNVLPSTVHRVVNPPPERRGVPRYSTPFFLHFASD 274 (312)
T ss_dssp SEEEEEC-CTTSCEEEECTTSCEEECCCCSSCEEEEECHHHHHHTTTSSCCCCEEECCCCGGGTTSCEEECCEEECCCTT
T ss_pred eEEEEeE-cCcCceEEECCCCcEEECCCCCCeEEEEhHHHHHHHhCCeecCCCceEeCCCccCCCCCEEEEEEEecCCCC
Confidence 9999999 689999997 589999999999999999999999999999999999998864 4679999999999999
Q ss_pred ceEecCCCCCCCCCCCccc-cccHHHHHHHHHhcc
Q 042152 203 GEIGPAPSLITPETPALFK-KISFVDYTKGFLSRK 236 (256)
Q Consensus 203 ~~i~pl~~~~~~~~~~~y~-~~~~~ey~~~~~~~~ 236 (256)
++|.|+++|+++++|++|+ ++|++||+..+++..
T Consensus 275 ~~i~pl~~~v~~~~p~~y~~~~t~~eyl~~r~~~~ 309 (312)
T 3oox_A 275 YEIKTLQNCVTAENPDRYPESITADEFLQQRLREI 309 (312)
T ss_dssp CEECCCGGGCCSSSCCSCSSCEEHHHHHHHHHHHH
T ss_pred cEEecCccccCCCCcccCCCCeeHHHHHHHHHHHh
Confidence 9999999999999999999 999999999998753
No 4
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=1.2e-62 Score=436.03 Aligned_cols=229 Identities=20% Similarity=0.255 Sum_probs=186.5
Q ss_pred CEEeccCCCHHHHHHHHHHHHHHhCCC-HHHHhccccCC-Cceeeccccccc------cccccCCcccccccccCccccc
Q 042152 1 MQLKSHGVSSSLVEKVTAEVHDFFDLP-MEEREKFWQRP-GEIEGFGQNFVV------SKEQKLDWGYGFTMFSLPALLR 72 (256)
Q Consensus 1 F~l~nHGi~~~~~~~~~~~~~~fF~lP-~e~K~~~~~~~-~~~~Gy~~~~~~------~~~~~~d~~e~~~~~~~p~~~~ 72 (256)
|||+||||+.++++++++++++||+|| .|+|+++.... ...+||+....+ ...+..||+|.|.++..
T Consensus 32 f~l~nHGi~~~l~~~~~~~~~~fF~lP~~e~K~~~~~~~~~~~~Gy~~~~~e~~~~~~~~~~~~d~~E~~~~~~~----- 106 (311)
T 1dcs_A 32 FYLTDCGLTDTELKSAKDLVIDFFEHGSEAEKRAVTSPVPTMRRGFTGLESESTAQITNTGSYSDYSMCYSMGTA----- 106 (311)
T ss_dssp EEEESSSCCHHHHHHHHHHHHHHHHHCCHHHHHHTBCSSCCSSSEEEEC-----------------CEEEEECSS-----
T ss_pred EEEECCCCCHHHHHHHHHHHHHHHcCCcHHHhHHhhccCCCCCCceeeccccccccccCCCCCCCcceeeeccCC-----
Confidence 899999999999999999999999999 99999998764 467999875543 23467899999998754
Q ss_pred CCCCCCCCCcc-----------------------cccCCCCCC-ccccccCceeeeeeeeCCCCccc--c--cccccccc
Q 042152 73 KPHLFPKLPLP-----------------------SALKMDPND-SKQFEDGVQSMRMNYYPSCQQQE--H--VIGFNPHT 124 (256)
Q Consensus 73 ~~~~wP~~~~~-----------------------~~Lgl~~~~-~~~~~~~~~~lr~~~Yp~~~~~~--~--~~g~~~Ht 124 (256)
+|.|| .+.+ ++|||+.+. .+.+.+..+.||++|||||++++ . .+|+++||
T Consensus 107 -~n~wP-~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~f~~~~~~lrl~~YPp~~~~~~~~~~~~g~~~Ht 184 (311)
T 1dcs_A 107 -DNLFP-SGDFERIWTQYFDRQYTASRAVAREVLRATGTEPDGGVEAFLDCEPLLRFRYFPQVPEHRSAEEQPLRMAPHY 184 (311)
T ss_dssp -SCCCS-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCTTCHHHHHSCCCEEEEEEECC-----------CCEEEEE
T ss_pred -CCCCC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCcHhHHhhcchhhheecCCCCCcccccCcccccccccc
Confidence 57899 3322 788994333 33444447889999999998763 3 67899999
Q ss_pred CCCcEEEEEeCCCCCc---eEEeeCCeeEeccCCCCeEEEEcCchhHHhhCCcccCcCceeccCC-----CCCeEEEEEe
Q 042152 125 DGSALTILLQLNEMDG---LQIKKDGMRVPVKTLPDTFIINVGENLEILTNGIYRSIVHRATVNS-----EKARLSFATF 196 (256)
Q Consensus 125 D~~~lTlL~q~~~v~G---LqV~~~g~W~~V~p~pg~lvVnvGd~L~~~TnG~~ks~~HRV~~~~-----~~~R~Si~~F 196 (256)
|+|+||||+|+++++| |||+++|+|++|+|+||+|||||||+||+||||+||||.|||+.++ +.+|||++||
T Consensus 185 D~g~lTlL~qd~~v~G~~~LqV~~~g~W~~V~p~pg~lvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~~~~~~R~Si~~F 264 (311)
T 1dcs_A 185 DLSMVTLIQQTPCANGFVSLQAEVGGAFTDLPYRPDAVLVFCGAIATLVTGGQVKAPRHHVAAPRRDQIAGSSRTSSVFF 264 (311)
T ss_dssp ECSSEEEEEEECCTTCCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTSCSCCCCEEECCC----CTTCCEEEEEEE
T ss_pred CCCeEEEEecCCCCCCceeEEEEeCCEEEeCcCCCCeEEEEHHHHHHHHhCCcccCCCceEeCCCcccCCCCCeEEEEEE
Confidence 9999999999327999 9999999999999999999999999999999999999999999987 6799999999
Q ss_pred eeCCCCceEecCCCCCCCCCCCcc--ccccHHHHHHHHHhccc
Q 042152 197 YSMKLDGEIGPAPSLITPETPALF--KKISFVDYTKGFLSRKL 237 (256)
Q Consensus 197 ~~p~~d~~i~pl~~~~~~~~~~~y--~~~~~~ey~~~~~~~~~ 237 (256)
++|+.|++|. +++++++++|++| +++|++||+..+++...
T Consensus 265 ~~p~~d~~i~-l~~~~~~~~p~~y~~~~~t~~ey~~~~~~~~~ 306 (311)
T 1dcs_A 265 LRPNADFTFS-VPLARECGFDVSLDGETATFQDWIGGNYVNIR 306 (311)
T ss_dssp ECCCTTCEEE-HHHHHHTTCCCCCCSSEEEHHHHHCSSCCCEE
T ss_pred EcCCCCcEEe-CCcccCCCCccccCCCCccHHHHHHHHHHHHh
Confidence 9999999999 9999988899999 99999999988777653
No 5
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=1.1e-60 Score=426.92 Aligned_cols=224 Identities=19% Similarity=0.258 Sum_probs=196.3
Q ss_pred CEEeccCCCHHHHHHHHHHHHHH-hCCCHHHHhccccCCCceeecccccccc--c------cccCCcccccccccCccc-
Q 042152 1 MQLKSHGVSSSLVEKVTAEVHDF-FDLPMEEREKFWQRPGEIEGFGQNFVVS--K------EQKLDWGYGFTMFSLPAL- 70 (256)
Q Consensus 1 F~l~nHGi~~~~~~~~~~~~~~f-F~lP~e~K~~~~~~~~~~~Gy~~~~~~~--~------~~~~d~~e~~~~~~~p~~- 70 (256)
|||+|||| +++++++++++| |+||.|+|+++.. +||.....+. . .+..||+|.|+++.....
T Consensus 42 f~v~nHGi---l~~~~~~~~~~F~F~lP~eeK~~~~~-----~Gy~~~~~e~~~~~~~~~~~~~~d~kE~~~~~~~~~~~ 113 (331)
T 1odm_A 42 FYAVNHGI---NVQRLSQKTKEFHMSITPEEKWDLAI-----RAYNKEHQDQVRAGYYLSIPGKKAVESFCYLNPNFTPD 113 (331)
T ss_dssp EEEESCCC---CHHHHHHHHHHHHHHCCHHHHHHHBC-----TTTCTTCTTCSSSEEECCBTTTBCCEEEEECCTTCCTT
T ss_pred EEEEccce---eHHHHHHHHHhccCCCCHHHHHhhhh-----cCCCcCCccccccccccccCCCCChhheEecccCCccc
Confidence 89999999 999999999999 9999999999975 5775433221 1 257899999998753210
Q ss_pred ---------ccCCCCCCCC--Ccc------------------------cccCCCCCC-ccccccCceeee--eeeeC---
Q 042152 71 ---------LRKPHLFPKL--PLP------------------------SALKMDPND-SKQFEDGVQSMR--MNYYP--- 109 (256)
Q Consensus 71 ---------~~~~~~wP~~--~~~------------------------~~Lgl~~~~-~~~~~~~~~~lr--~~~Yp--- 109 (256)
...+|.||+. ++. ++|||++++ .+.+..+.+.|| ++|||
T Consensus 114 ~p~~~~~~~~~~~n~wP~~~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lr~~l~~YP~~~ 193 (331)
T 1odm_A 114 HPRIQAKTPTHEVNVWPDETKHPGFQDFAEQYYWDVFGLSSALLKGYALALGKEENFFARHFKPDDTLASVVLIRYPYLD 193 (331)
T ss_dssp SHHHHTTCTTCCCCCCCCTTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTTGGGCCTTTCCCEEEEEEECCCS
T ss_pred cccccccccccCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhcCcHHHHHHHHhhCCCcc
Confidence 2357999986 433 889999998 888888888999 99999
Q ss_pred ---C---CCcccc-ccccccccCCCcEEEEEeCCCCCceEEe-eCCeeEeccCCCCeEEEEcCchhHHhhCCcccCcCce
Q 042152 110 ---S---CQQQEH-VIGFNPHTDGSALTILLQLNEMDGLQIK-KDGMRVPVKTLPDTFIINVGENLEILTNGIYRSIVHR 181 (256)
Q Consensus 110 ---~---~~~~~~-~~g~~~HtD~~~lTlL~q~~~v~GLqV~-~~g~W~~V~p~pg~lvVnvGd~L~~~TnG~~ks~~HR 181 (256)
| |++++. .+|+++|||+|+||||+| |+++||||+ ++| |++|+|+||+|||||||+||+||||+||||.||
T Consensus 194 ~~~p~~~~~~~~~~~~g~~~HtD~g~lTlL~q-d~v~GLQV~~~~g-Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HR 271 (331)
T 1odm_A 194 PYPEAAIKTAADGTKLSFEWHEDVSLITVLYQ-SNVQNLQVETAAG-YQDIEADDTGYLINCGSYMAHLTNNYYKAPIHR 271 (331)
T ss_dssp SCCGGGCEECTTSCEEEEEEECCSSSEEEEEE-CSSCCEEEEETTE-EEECCCCTTSEEEEECHHHHHHTTTSSCCCCEE
T ss_pred cccccccCCCccccccccccccCCCeEEEEee-CCCCCEEEEcCCC-eEECCCCCCeEEEEccHHHHHHhCCEeeCCCce
Confidence 7 877776 899999999999999999 689999999 588 999999999999999999999999999999999
Q ss_pred eccCCCCCeEEEEEeeeCCCCceEecCCCCCCCCCCCccccccHHHHHHHHHhcc
Q 042152 182 ATVNSEKARLSFATFYSMKLDGEIGPAPSLITPETPALFKKISFVDYTKGFLSRK 236 (256)
Q Consensus 182 V~~~~~~~R~Si~~F~~p~~d~~i~pl~~~~~~~~~~~y~~~~~~ey~~~~~~~~ 236 (256)
|+.+ +.+|+|++||++|+.|++|.|+++++++++ ++|+++|++||+..+++..
T Consensus 272 Vv~~-~~~R~Sia~F~~P~~d~~i~pl~~~~~~~~-~~y~~~t~~e~l~~~~~~~ 324 (331)
T 1odm_A 272 VKWV-NAERQSLPFFVNLGYDSVIDPFDPREPNGK-SDREPLSYGDYLQNGLVSL 324 (331)
T ss_dssp EECC-CSCEEEEEEEECCCTTCBCCCCCTTSTTCC-CSSCCCBHHHHHHHHHHHH
T ss_pred eCCC-CCCEEEEEEEEcCCCCCEEeCCCccccccc-cCCCCccHHHHHHHHHHHH
Confidence 9865 789999999999999999999999998877 8999999999999988765
No 6
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=100.00 E-value=6.7e-57 Score=393.59 Aligned_cols=209 Identities=22% Similarity=0.297 Sum_probs=173.9
Q ss_pred CEEeccCCCHHHHHHHHHHHHHHhCCCHHHHhccccCCCceeeccccc-ccc--ccccCCcccccccccCcccccCCCCC
Q 042152 1 MQLKSHGVSSSLVEKVTAEVHDFFDLPMEEREKFWQRPGEIEGFGQNF-VVS--KEQKLDWGYGFTMFSLPALLRKPHLF 77 (256)
Q Consensus 1 F~l~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~Gy~~~~-~~~--~~~~~d~~e~~~~~~~p~~~~~~~~w 77 (256)
|||+|||||.++++++++++++||+| |+|+++...++..+||.... .+. .....||+|.|.+. .|
T Consensus 28 F~v~nHGi~~~li~~~~~~~~~FF~l--e~K~k~~~~~~~~~GY~~~~~~e~~~~~~~~D~kE~~~~~----------p~ 95 (280)
T 3on7_A 28 GVLSNHPIDKELVERIYTEWQAFFNS--EAKNEFMFNRETHDGFFPASISETAKGHTVKDIKEYYHVY----------PW 95 (280)
T ss_dssp EEEESCSSCHHHHHHHHHHHHHHHTS--GGGGGGBCCTTTCCEEECCC--------CCCCSCEEEEEC----------TT
T ss_pred EEEECCCCCHHHHHHHHHHHHHHhhh--HHHHHhccCCCCCCccccCccccccCCCCcccHHHHHhcC----------CC
Confidence 89999999999999999999999998 89999987666689997654 222 23467999998763 25
Q ss_pred CCCCcc------------------------cccCCC--CCC----ccccccC-ceeeeeeeeCCCCccc--ccccccccc
Q 042152 78 PKLPLP------------------------SALKMD--PND----SKQFEDG-VQSMRMNYYPSCQQQE--HVIGFNPHT 124 (256)
Q Consensus 78 P~~~~~------------------------~~Lgl~--~~~----~~~~~~~-~~~lr~~~Yp~~~~~~--~~~g~~~Ht 124 (256)
|..++. ++||++ +++ .+.+.++ .+.||++|||||+.++ ..+|+++||
T Consensus 96 ~~~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~~~~lr~~~YP~~~~~~~~~~~g~~~Ht 175 (280)
T 3on7_A 96 GRIPDSLRANILAYYEKANTLASELLEWIETYSPDEIKAKFSIPLPEMIANSHKTLLRILHYPPMTGDEEMGAIRAAAHE 175 (280)
T ss_dssp SCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHTTCSSCHHHHHTTCSSCEEEEEEECCCCTTCCCCSEEEEEEC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcchhhhhHHHHHHhcCCccceEEEEECCCCCCccccCcccccCCC
Confidence 554432 566654 333 2344444 4899999999998764 479999999
Q ss_pred CCCcEEEEEeCCCCCceEEee-CCeeEeccCCCCeEEEEcCchhHHhhCCcccCcCceeccCC----CCCeEEEEEeeeC
Q 042152 125 DGSALTILLQLNEMDGLQIKK-DGMRVPVKTLPDTFIINVGENLEILTNGIYRSIVHRATVNS----EKARLSFATFYSM 199 (256)
Q Consensus 125 D~~~lTlL~q~~~v~GLqV~~-~g~W~~V~p~pg~lvVnvGd~L~~~TnG~~ks~~HRV~~~~----~~~R~Si~~F~~p 199 (256)
|+|+||||+| |+++||||+. +|+|++|+|+||++||||||+||+||||+||||.|||++++ ..+|||++||++|
T Consensus 176 D~g~lTlL~q-d~~~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~Tng~~kS~~HRVv~~~~~~~~~~R~Si~~F~~P 254 (280)
T 3on7_A 176 DINLITVLPT-ANEPGLQVKAKDGSWLDVPSDFGNIIINIGDMLQEASDGYFPSTSHRVINPEGTDKTKSRISLPLFLHP 254 (280)
T ss_dssp CCSSEEEEEC-CSCCCEEEECTTSCEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEEECCTTCCTTSCEEECCEEECC
T ss_pred CCCeEEEEEe-cCCCCeEEEcCCCCEEECcCCCCEEEEEcChHHHHHhCCcccCCCceEeCCCCCCCCCCeEEEEEEEcC
Confidence 9999999999 6899999994 89999999999999999999999999999999999999874 4589999999999
Q ss_pred CCCceEecCCCCCCCCCCCccccccHHHHHHHHHhcc
Q 042152 200 KLDGEIGPAPSLITPETPALFKKISFVDYTKGFLSRK 236 (256)
Q Consensus 200 ~~d~~i~pl~~~~~~~~~~~y~~~~~~ey~~~~~~~~ 236 (256)
+.|++|.| ++|++||+..|++..
T Consensus 255 ~~d~~i~p--------------~ita~~~l~~rl~~~ 277 (280)
T 3on7_A 255 HPSVVLSE--------------RYTADSYLMERLREL 277 (280)
T ss_dssp CTTCBCSS--------------SCBHHHHHHHHHHHT
T ss_pred CCCCEECC--------------CccHHHHHHHHHHHh
Confidence 99999974 699999999998763
No 7
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=93.95 E-value=0.27 Score=41.15 Aligned_cols=81 Identities=19% Similarity=0.259 Sum_probs=56.3
Q ss_pred eeeeeeCCCCccccccccccccCCC-----cEEEEEeCCC-------CCceEEeeCC--eeEeccCCCCeEEEEcCchhH
Q 042152 103 MRMNYYPSCQQQEHVIGFNPHTDGS-----ALTILLQLNE-------MDGLQIKKDG--MRVPVKTLPDTFIINVGENLE 168 (256)
Q Consensus 103 lr~~~Yp~~~~~~~~~g~~~HtD~~-----~lTlL~q~~~-------v~GLqV~~~g--~W~~V~p~pg~lvVnvGd~L~ 168 (256)
+.+.+|++. .-....|.|.. .+|+++.-++ .|.|++..++ ....|.|..|.+|+.-.+.
T Consensus 119 ~~~~~Y~~~-----G~~y~~H~D~~~~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~~~~~~~v~P~~grlv~F~s~~-- 191 (247)
T 2hbt_A 119 AMVACYPGN-----GTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDR-- 191 (247)
T ss_dssp EEEEEECSS-----SCCEEEECSSCSCCSEEEEEEEECBTTCCHHHHBCCEEECCTTCSSCEEECCBTTEEEEEECST--
T ss_pred EEEEEecCC-----CCcccccccCCCCCCceEEEEEEeCCCCCCCCCceeEEEecCCCCceEEEEcCCCEEEEEecCC--
Confidence 667889861 12356777762 6888876322 2337777644 6789999999999987531
Q ss_pred HhhCCcccCcCceeccCCCCCeEEEEEeeeC
Q 042152 169 ILTNGIYRSIVHRATVNSEKARLSFATFYSM 199 (256)
Q Consensus 169 ~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~p 199 (256)
-++|.|.. ....|+||+..+.-
T Consensus 192 --------~~~H~V~p-~~~~R~sit~W~~~ 213 (247)
T 2hbt_A 192 --------RNPHEVQP-AYATRYAITVWYFD 213 (247)
T ss_dssp --------TCCEEECC-BSSCEEEEEEEEEE
T ss_pred --------Cceeeecc-CCCEEEEEEEEEcC
Confidence 15899976 45799999987753
No 8
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=93.52 E-value=0.31 Score=39.94 Aligned_cols=43 Identities=14% Similarity=0.044 Sum_probs=34.4
Q ss_pred CeeEeccCCCCeEEEEcCchhHHhhCCcccCcCceeccCCC-CCeEEEEEeeeCCC
Q 042152 147 GMRVPVKTLPDTFIINVGENLEILTNGIYRSIVHRATVNSE-KARLSFATFYSMKL 201 (256)
Q Consensus 147 g~W~~V~p~pg~lvVnvGd~L~~~TnG~~ks~~HRV~~~~~-~~R~Si~~F~~p~~ 201 (256)
..+..|.|.+|.+||.-+.+ .|.|..... .+|+||+|.+.+..
T Consensus 166 ~~~~~i~P~~G~lvlFpS~l------------~H~V~p~~~~~~RiSIsFN~~~~~ 209 (216)
T 2rg4_A 166 RTFRSVAPKVGDVLLWESWL------------RHEVPMNMAEEDRISVSFNYAWGE 209 (216)
T ss_dssp CSEEEECCCTTEEEEEETTS------------CEEECCCCSSSCEEEEEEEEEC--
T ss_pred CCeeEecCCCCeEEEECCCC------------EEeccCCCCCCCEEEEEEEeecCC
Confidence 45678999999999987753 799988654 68999999998764
No 9
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=92.64 E-value=0.42 Score=39.94 Aligned_cols=80 Identities=20% Similarity=0.215 Sum_probs=54.9
Q ss_pred eeeeeeeeCCCCccccccccccccCCC-----------cEEEEEeCCC----C-CceEEeeCCeeEeccCCCCeEEEEcC
Q 042152 101 QSMRMNYYPSCQQQEHVIGFNPHTDGS-----------ALTILLQLNE----M-DGLQIKKDGMRVPVKTLPDTFIINVG 164 (256)
Q Consensus 101 ~~lr~~~Yp~~~~~~~~~g~~~HtD~~-----------~lTlL~q~~~----v-~GLqV~~~g~W~~V~p~pg~lvVnvG 164 (256)
.-+++++|.+.. -..+|.|.. .+|+++.-++ . |.|.+.....=..|+|..|++|+.-.
T Consensus 99 e~~~~~rY~~G~------~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGetvf~~~~~~~~V~P~~G~~v~F~s 172 (243)
T 3dkq_A 99 YPPLFNRYQGGE------TFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVIQDTYGQQSIKLSAGSLVLYPS 172 (243)
T ss_dssp EEEEEEEECTTC------EEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEEEETTEEEEECCCTTCEEEEET
T ss_pred ccceEEEECCCC------eeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCceEEEeeCCCcEEEecCCCEEEEECC
Confidence 348889998732 245666653 4666665333 2 33666654334789999999998643
Q ss_pred chhHHhhCCcccCcCceeccCCCCCeEEEEEeee
Q 042152 165 ENLEILTNGIYRSIVHRATVNSEKARLSFATFYS 198 (256)
Q Consensus 165 d~L~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~ 198 (256)
.++|+|.......|+++..+++
T Consensus 173 ------------~~lH~v~pV~~G~R~~~~~Wi~ 194 (243)
T 3dkq_A 173 ------------SSLHQVTPVLSGERTAAFMWLQ 194 (243)
T ss_dssp ------------TSEEEECCEEEECEEEEEEEEE
T ss_pred ------------CCeEcCccccccCEEEEEEehh
Confidence 3689998876679999999886
No 10
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=88.67 E-value=2 Score=35.57 Aligned_cols=84 Identities=18% Similarity=0.197 Sum_probs=55.1
Q ss_pred ceeeeeeeeCCCCccccccccccccCCC--------cEEEEEeCCCCCceEEee-C----------CeeEeccCCCCeEE
Q 042152 100 VQSMRMNYYPSCQQQEHVIGFNPHTDGS--------ALTILLQLNEMDGLQIKK-D----------GMRVPVKTLPDTFI 160 (256)
Q Consensus 100 ~~~lr~~~Yp~~~~~~~~~g~~~HtD~~--------~lTlL~q~~~v~GLqV~~-~----------g~W~~V~p~pg~lv 160 (256)
...+-+|+|.+. .-++++|.|-. +.||=+. ...=+.+.. . +..+.+...+|+++
T Consensus 125 ~n~~LvN~Y~~G-----~d~i~~H~D~~~~~~~~~~IaslSLG--~~~~f~f~~~~~~~~~~~~~~~~~~~i~L~~gsll 197 (238)
T 2iuw_A 125 FNSLLCNLYRNE-----KDSVDWHSDDEPSLGRCPIIASLSFG--ATRTFEMRKKPPPEENGDYTYVERVKIPLDHGTLL 197 (238)
T ss_dssp CCEEEEEEECST-----TCCEEEECCCCGGGCSSCCEEEEEEE--SCEEEEEEECCC--------CCCEEEEEECTTCEE
T ss_pred CCEEEEEEECCC-----CCceeCCcCChhhcCCCCcEEEEECC--CCEEEEEeccCCccccCcccCCceEEEEcCCCCEE
Confidence 345678999873 23688898842 2233332 122233332 1 46899999999999
Q ss_pred EEcCchhHHhhCCcccCcCceeccC--CCCCeEEEEEeee
Q 042152 161 INVGENLEILTNGIYRSIVHRATVN--SEKARLSFATFYS 198 (256)
Q Consensus 161 VnvGd~L~~~TnG~~ks~~HRV~~~--~~~~R~Si~~F~~ 198 (256)
|.-|++=..|. |.|... ....|+|+.|-..
T Consensus 198 vM~G~~r~~w~--------H~I~~~~~~~~~RIsLTfR~v 229 (238)
T 2iuw_A 198 IMEGATQADWQ--------HRVPKEYHSREPRVNLTFRTV 229 (238)
T ss_dssp EEEETHHHHEE--------EEECCCSSCCCCEEEEEEECC
T ss_pred EEChhhhCccE--------ecCCCcCCCCCCEEEEEeeec
Confidence 99999877776 444322 2578999999764
No 11
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=88.46 E-value=1.8 Score=34.90 Aligned_cols=81 Identities=10% Similarity=0.071 Sum_probs=53.3
Q ss_pred eeeeeeeeCCCCccccccccccccCCC--------cEEEEEeCCCCCceEEeeC----------CeeEeccCCCCeEEEE
Q 042152 101 QSMRMNYYPSCQQQEHVIGFNPHTDGS--------ALTILLQLNEMDGLQIKKD----------GMRVPVKTLPDTFIIN 162 (256)
Q Consensus 101 ~~lr~~~Yp~~~~~~~~~g~~~HtD~~--------~lTlL~q~~~v~GLqV~~~----------g~W~~V~p~pg~lvVn 162 (256)
...-+|+|.+.. -+++.|.|-. +.||=+. ...=+.+... +..+.+...+|+++|.
T Consensus 100 n~~LvN~Y~~G~-----d~i~~H~D~~~~~~~~~~IasvSLG--~~~~f~~~~~~~~~~~~~~~~~~~~~~L~~GsllvM 172 (204)
T 3s57_A 100 NFVLINRYKDGS-----DHICEHRDDERELAPGSPIASVSFG--ASRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMM 172 (204)
T ss_dssp SEEEEEEESSTT-----CCEEEECCCCTTBCTTCCEEEEEEE--SCEEEEEEEGGGCSSSCSCCCCCEEEEECTTEEEEE
T ss_pred ceeEEEEECCCC-----CcccceecChhhccCCCcEEEEECC--CceEEEEEEcCCCccccccCCceEEEECCCCCEEEE
Confidence 346689998732 3688898852 2233232 2233444431 2578899999999999
Q ss_pred cCchhHHhhCCcccCcCceeccCC--CCCeEEEEEe
Q 042152 163 VGENLEILTNGIYRSIVHRATVNS--EKARLSFATF 196 (256)
Q Consensus 163 vGd~L~~~TnG~~ks~~HRV~~~~--~~~R~Si~~F 196 (256)
-|++=..|. |.|-... ...|+|+.|-
T Consensus 173 ~g~~q~~w~--------H~Ip~~~~~~~~RislTFR 200 (204)
T 3s57_A 173 NHPTNTHWY--------HSLPVRKKVLAPRVNLTFR 200 (204)
T ss_dssp ETTHHHHEE--------EEECCCTTCCSCEEEEEEE
T ss_pred CchhhheeE--------eeccccCCCCCCEEEEEee
Confidence 999877786 6654432 3689999985
No 12
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=85.61 E-value=2.8 Score=34.10 Aligned_cols=80 Identities=13% Similarity=0.095 Sum_probs=52.3
Q ss_pred eeeeeeeeCCCCccccccccccccCC-----C--cEEEEEeCCCCCceEEee---CCeeEeccCCCCeEEEEcCchhHHh
Q 042152 101 QSMRMNYYPSCQQQEHVIGFNPHTDG-----S--ALTILLQLNEMDGLQIKK---DGMRVPVKTLPDTFIINVGENLEIL 170 (256)
Q Consensus 101 ~~lr~~~Yp~~~~~~~~~g~~~HtD~-----~--~lTlL~q~~~v~GLqV~~---~g~W~~V~p~pg~lvVnvGd~L~~~ 170 (256)
...-+|+|.+. . +++.|.|- + ++||=+. ...=+.+.. .+..+.+...+|+++|.-|+.- .|
T Consensus 105 n~~LvN~Y~~G-----~-~i~~H~D~~e~~~~~pI~svSLG--~~~~f~f~~~~~~~~~~~i~L~~GsllvM~G~~r-~~ 175 (211)
T 3i3q_A 105 DACLINRYAPG-----A-KLSLHQDKDEPDLRAPIVSVSLG--LPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESR-LF 175 (211)
T ss_dssp CEEEEEEECTT-----C-CEEEECCCCCSCTTSCEEEEEEE--SCEEEEECCSSTTSCCEEEEECTTCEEEECGGGT-TC
T ss_pred CEEEEEEEcCC-----C-CcccccCCCccccCCCEEEEECC--CCeEEEEecccCCCceEEEECCCCCEEEECchHH-ce
Confidence 34678999872 3 78999992 2 2333333 223344443 3678899999999999988762 22
Q ss_pred hCCcccCcCceeccCCC-------CCeEEEEEee
Q 042152 171 TNGIYRSIVHRATVNSE-------KARLSFATFY 197 (256)
Q Consensus 171 TnG~~ks~~HRV~~~~~-------~~R~Si~~F~ 197 (256)
.|.|..... ..|+|+.|-.
T Consensus 176 --------~H~I~~~~~~~~p~~~~~RIsLTFR~ 201 (211)
T 3i3q_A 176 --------YHGIQPLKAGFHPLTIDCRYNLTFRQ 201 (211)
T ss_dssp --------CEEECCCCCCCBTTTBTCEEEEEEEC
T ss_pred --------EeccCcccCCcCCCCCCCEEEEEeee
Confidence 477755432 4699999864
No 13
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=82.97 E-value=2.9 Score=36.65 Aligned_cols=95 Identities=22% Similarity=0.276 Sum_probs=60.9
Q ss_pred ceeeeeeeeCCCCccccccccccccCCC-----cEEEEEeCCCCCceEEee-CCeeEeccCCCCeEEEEcCchhHHhhCC
Q 042152 100 VQSMRMNYYPSCQQQEHVIGFNPHTDGS-----ALTILLQLNEMDGLQIKK-DGMRVPVKTLPDTFIINVGENLEILTNG 173 (256)
Q Consensus 100 ~~~lr~~~Yp~~~~~~~~~g~~~HtD~~-----~lTlL~q~~~v~GLqV~~-~g~W~~V~p~pg~lvVnvGd~L~~~TnG 173 (256)
...+-+|+|.+. -++++|.|-. .|..|-- ....=+.+.. +|.++.+...+|+++|.-|++-..|.-|
T Consensus 197 ~n~~lvN~Y~~G------~~I~~H~D~~~~~~~~I~slSL-G~~~~f~f~~~~~~~~~l~L~~gsLlvM~G~~r~~w~H~ 269 (345)
T 3tht_A 197 PDQMTINQYEPG------QGIPAHIDTHSAFEDEIVSLSL-GSEIVMDFKHPDGIAVPVMLPRRSLLVMTGESRYLWTHG 269 (345)
T ss_dssp CSEEEEEEECTT------CCEEEECCCTTTBCSCEEEEEE-SSCEEEEEECTTSCEEEEEECTTEEEEECTHHHHTSEEE
T ss_pred CCEEEEEEecCC------CCEeeccCCchhcCCeEEEEEC-CCceeEEEccCCCceEEEEcCCCcEEEEChHHhhceEcc
Confidence 345678889762 2789999873 2222222 1222344443 5779999999999999999998888655
Q ss_pred cccCcCceec------------------cCCCCCeEEEEEeeeCCC
Q 042152 174 IYRSIVHRAT------------------VNSEKARLSFATFYSMKL 201 (256)
Q Consensus 174 ~~ks~~HRV~------------------~~~~~~R~Si~~F~~p~~ 201 (256)
.-+-...-+- ..+...|+|+.|-.-+..
T Consensus 270 I~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~r~~RiSlT~R~v~~~ 315 (345)
T 3tht_A 270 ITCRKFDTVQASESLKSGIITSDVGDLTLSKRGLRTSFTFRKVRQT 315 (345)
T ss_dssp ECCCSEEEEESGGGSSCEECCSSSSCEEEEECCCEEEEEEECBCSS
T ss_pred CCcccCCccCcccccccccccccCCCceeccCCCEEEEEEEecCCC
Confidence 5443332221 011357999999987665
No 14
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=76.47 E-value=5 Score=32.48 Aligned_cols=89 Identities=16% Similarity=0.260 Sum_probs=56.0
Q ss_pred eeeeeeeCCCCccccccccccccCC--------------CcEEEEEeCCC--CCc-eEEeeCC-------------eeEe
Q 042152 102 SMRMNYYPSCQQQEHVIGFNPHTDG--------------SALTILLQLNE--MDG-LQIKKDG-------------MRVP 151 (256)
Q Consensus 102 ~lr~~~Yp~~~~~~~~~g~~~HtD~--------------~~lTlL~q~~~--v~G-LqV~~~g-------------~W~~ 151 (256)
.+++++|.+.. ...+|.|+ ..+|+|+--++ .|| +.+...+ .-+.
T Consensus 99 ~~qv~rY~~G~------~y~~H~D~~~~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~~~~~~~~~~~~c~~~~~~ 172 (224)
T 2jig_A 99 GLQVLHYHDGQ------KYEPHYDYFHDPVNAGPEHGGQRVVTMLMYLTTVEEGGETVLPNAEQKVTGDGWSECAKRGLA 172 (224)
T ss_dssp CCEEEEEETTC------CEEEECCSSCCTTSSSCCCCSCEEEEEEEECSCCSEECCEEETTSSSCCCSTTSCTTGGGSEE
T ss_pred ceEEEecCCCc------cccCcccCCCCccccccccCCCeEEEEEEEecCCCCCCceeCCCcccccccccccccccCceE
Confidence 47788887632 24566664 25788865332 344 4432211 2478
Q ss_pred ccCCCCeEEEEcCchhHHhhCCcc-cCcCceeccCCCCCeEEEEEeeeCC
Q 042152 152 VKTLPDTFIINVGENLEILTNGIY-RSIVHRATVNSEKARLSFATFYSMK 200 (256)
Q Consensus 152 V~p~pg~lvVnvGd~L~~~TnG~~-ks~~HRV~~~~~~~R~Si~~F~~p~ 200 (256)
|.|..|++|+.-- ...+|.. ..++|+|.......|+++..+++-.
T Consensus 173 V~P~~G~al~f~~----~~~~g~~d~~~lH~~~PV~~G~K~~~~~Wi~~~ 218 (224)
T 2jig_A 173 VKPIKGDALMFYS----LKPDGSNDPASLHGSCPTLKGDKWSATKWIHVA 218 (224)
T ss_dssp ECCCTTCEEEEES----BCTTSCBCGGGCEEECCEEESEEEEEEEEEESS
T ss_pred EecccCcEEEEEe----eCCCCCCCCCCcccCCccccceEEEEEEeEEcC
Confidence 9999999888643 1123432 5789999877667899999988644
No 15
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=74.54 E-value=8.2 Score=31.35 Aligned_cols=87 Identities=11% Similarity=0.066 Sum_probs=54.3
Q ss_pred eeeeeeeCCCCccccccccccccCCC-----------cEEEEEeCCC--CCceEEeeCCeeEeccCCCCeEEEEcCchhH
Q 042152 102 SMRMNYYPSCQQQEHVIGFNPHTDGS-----------ALTILLQLNE--MDGLQIKKDGMRVPVKTLPDTFIINVGENLE 168 (256)
Q Consensus 102 ~lr~~~Yp~~~~~~~~~g~~~HtD~~-----------~lTlL~q~~~--v~GLqV~~~g~W~~V~p~pg~lvVnvGd~L~ 168 (256)
.+++++|.+.. -..+|.|+. .+|+|+--++ .||==+..+. =+.|.|..|++|+.-.-
T Consensus 112 ~lqv~~Y~~G~------~y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~-~~~V~P~~G~al~f~~~--- 181 (216)
T 3itq_A 112 GLHILNYEVDQ------QYKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGGETFFPKL-NLSVHPRKGMAVYFEYF--- 181 (216)
T ss_dssp CCEEEEECBTC------CEEEECSSCCTTSGGGGGCEEEEEEEECSCCSEECCEEETTT-TEEECCCTTCEEEEECC---
T ss_pred ceeEEEeCCCC------ccccccCCCcCCCcccCCceEEEEEEecccCCcCceeEecCC-CCEEecCCCeEEEEecc---
Confidence 47888887632 145676653 4788776333 3442233321 27899999998886531
Q ss_pred HhhCCc-ccCcCceeccCCCCCeEEEEEeeeC
Q 042152 169 ILTNGI-YRSIVHRATVNSEKARLSFATFYSM 199 (256)
Q Consensus 169 ~~TnG~-~ks~~HRV~~~~~~~R~Si~~F~~p 199 (256)
..+|. -..++|+|.......|+++..+++-
T Consensus 182 -~~~g~~d~~~lH~~~PV~~G~K~v~~~W~~~ 212 (216)
T 3itq_A 182 -YQDQSLNELTLHGGAPVTKGEKWIATQWVRR 212 (216)
T ss_dssp -CSSHHHHHTTCEEECCEEESCEEEEEEEEES
T ss_pred -CCCCCCCCccccccceeccccEEEEEeeEec
Confidence 11222 2468999987766799999888763
No 16
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=48.39 E-value=25 Score=29.92 Aligned_cols=65 Identities=17% Similarity=0.210 Sum_probs=42.9
Q ss_pred ccccccCC--------CcEEEEEeCCCCCceEEeeCCeeEeccCCCCeEEEEcCchhHHhhCCcccCcCceeccCCCCCe
Q 042152 119 GFNPHTDG--------SALTILLQLNEMDGLQIKKDGMRVPVKTLPDTFIINVGENLEILTNGIYRSIVHRATVNSEKAR 190 (256)
Q Consensus 119 g~~~HtD~--------~~lTlL~q~~~v~GLqV~~~g~W~~V~p~pg~lvVnvGd~L~~~TnG~~ks~~HRV~~~~~~~R 190 (256)
.+.+|.|. +.+.+...-...+|....-+|+-+..++ ..+..+|. +..|+|.+.+..+|
T Consensus 103 ~I~~HrD~~~l~~~~~~~~RlHIPL~Tnp~~~f~vdg~~~~m~~-GE~w~~d~-------------~~~H~v~N~g~~~R 168 (290)
T 1e5r_A 103 IVIPHRDFVELDREVDRYFRTFMVLEDSPLAFHSNEDTVIHMRP-GEIWFLDA-------------ATVHSAVNFSEISR 168 (290)
T ss_dssp EEEEECCC--------CBCCEEEECSCCTTEEEEETTEEECCCT-TEEEECCT-------------TSCEEEEESSSSCC
T ss_pred EeeCccCccccccccCCceEEEeeEecCCCcEEEECCEEEecCC-CCEEEEcC-------------CCeeEEEcCCCCCe
Confidence 58899998 3344555433456777666776555554 22344443 35799999999999
Q ss_pred EEEEEee
Q 042152 191 LSFATFY 197 (256)
Q Consensus 191 ~Si~~F~ 197 (256)
+.+.+=+
T Consensus 169 IhLv~D~ 175 (290)
T 1e5r_A 169 QSLCVDF 175 (290)
T ss_dssp CEEEEEE
T ss_pred EEEEEEe
Confidence 9988765
No 17
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=43.16 E-value=44 Score=26.59 Aligned_cols=67 Identities=21% Similarity=0.262 Sum_probs=40.6
Q ss_pred cccccccCCC--cEEEEEeCCCCCceEEeeCCeeEeccCCCCeEEEEcCchhHHhhCCcc----cCcCceeccCCCCCeE
Q 042152 118 IGFNPHTDGS--ALTILLQLNEMDGLQIKKDGMRVPVKTLPDTFIINVGENLEILTNGIY----RSIVHRATVNSEKARL 191 (256)
Q Consensus 118 ~g~~~HtD~~--~lTlL~q~~~v~GLqV~~~g~W~~V~p~pg~lvVnvGd~L~~~TnG~~----ks~~HRV~~~~~~~R~ 191 (256)
..+.+|+|.. .|++++. |+ ||+ ++ ..+.||+.-..|..|.. -|-.|.|.+.+...|+
T Consensus 113 ~~I~pH~g~~n~~lR~HL~------L~---------~p~-~~-~~i~V~~~~~~w~eGe~~~fDds~~Hev~N~~d~~Rv 175 (197)
T 3rcq_A 113 THVWPHTGPTNCRLRMHLG------LV---------IPK-EG-CKIRCANETKTWEEGKVLIFDDSFEHEVWQDASSFRL 175 (197)
T ss_dssp EEEEEECCSCTTEEEEEEE------EE---------CCS-SS-EEEEETTEEECCCBTCEEEECTTSCEEEEECSSSCEE
T ss_pred CCcCCeeCCCCCeEEEEEE------EE---------eCC-CC-cEEEECCEEEEeeCCcEEEEcCCeEEEEEECCCCCEE
Confidence 3578898864 5555554 22 222 12 23445666666666644 3678999998888898
Q ss_pred EEEE-eeeCCC
Q 042152 192 SFAT-FYSMKL 201 (256)
Q Consensus 192 Si~~-F~~p~~ 201 (256)
-+.+ |.+|+.
T Consensus 176 vL~~D~~rPdl 186 (197)
T 3rcq_A 176 IFIVDVWHPEL 186 (197)
T ss_dssp EEEEEEECTTS
T ss_pred EEEEeeeCCCC
Confidence 7655 455543
No 18
>2ww6_A Fibritin, T4 fibritin; D-amino acids, chaperone, viral protein; HET: DPN PG4; 0.98A {Enterobacteria phage T4} PDB: 1rfo_A 1u0p_A 2kbl_A 2ww7_A*
Probab=41.79 E-value=21 Score=18.71 Aligned_cols=13 Identities=23% Similarity=0.197 Sum_probs=10.5
Q ss_pred eEEeeCCeeEecc
Q 042152 141 LQIKKDGMRVPVK 153 (256)
Q Consensus 141 LqV~~~g~W~~V~ 153 (256)
..|+++|.|+..+
T Consensus 12 ~Yvr~dg~WV~l~ 24 (27)
T 2ww6_A 12 AYVRKFGEWVLLS 24 (27)
T ss_dssp EEEEETTEEEEGG
T ss_pred eeEEEcCeEEEcc
Confidence 5678899999864
No 19
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A
Probab=25.84 E-value=2.5e+02 Score=26.50 Aligned_cols=81 Identities=20% Similarity=0.215 Sum_probs=50.8
Q ss_pred eeeeeeCCCCccccccccccccCC-C--cEEEEEeCCC---------CCceEEee-C-------CeeEeccCCCCeEEEE
Q 042152 103 MRMNYYPSCQQQEHVIGFNPHTDG-S--ALTILLQLNE---------MDGLQIKK-D-------GMRVPVKTLPDTFIIN 162 (256)
Q Consensus 103 lr~~~Yp~~~~~~~~~g~~~HtD~-~--~lTlL~q~~~---------v~GLqV~~-~-------g~W~~V~p~pg~lvVn 162 (256)
+.++.|++. -.+..|.|. + .||+++--+. .|-|++.. + .....|.|.-|++|+.
T Consensus 126 ~~~a~Y~~G------~fL~~H~D~~~~RrvS~VLYLN~pd~~W~~e~GGeL~Lyd~d~~~~P~~d~~~~I~P~fNrLV~F 199 (633)
T 3kt7_A 126 MSINTYTKG------CHLLTHDDVIGSRRISFILYLPDPDRKWKSHYGGGLRLFPSILPNVPHSDPSAKLVPQFNQIAFF 199 (633)
T ss_dssp EEEEEECTT------CEEEEECCCCTTEEEEEEEECSCTTSCCCGGGBCCEEECCEEETTEECSSCSEEECCCTTEEEEE
T ss_pred EEEEEeCCC------CeeeecCCCCCCeEEEEEEEcCCCCCCCCccCCceEEEecCCCcCCCCCCceEEEecCCCeEEEE
Confidence 567788763 246789984 2 4666653221 24488875 2 2467899999999987
Q ss_pred cCchhHHhhCCcccCcCceeccCC-CCCeEEEEEeee
Q 042152 163 VGENLEILTNGIYRSIVHRATVNS-EKARLSFATFYS 198 (256)
Q Consensus 163 vGd~L~~~TnG~~ks~~HRV~~~~-~~~R~Si~~F~~ 198 (256)
.-.- + ...|.|.... ++.|+||+-.++
T Consensus 200 ~vsp------~---~S~H~V~eV~~~~~RlSItGWF~ 227 (633)
T 3kt7_A 200 KVLP------G---FSFHDXEEVKVDKHRLSIQGWYH 227 (633)
T ss_dssp ECCT------T---TCCEEECCBCSSCCEEEEEEEEE
T ss_pred EcCC------C---CCcCCCCccCCCCCEEEEEEEec
Confidence 5310 1 2468763321 789999987665
No 20
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=24.48 E-value=54 Score=27.43 Aligned_cols=21 Identities=14% Similarity=0.339 Sum_probs=17.5
Q ss_pred cccccccccccCCCcEEEEEe
Q 042152 114 QEHVIGFNPHTDGSALTILLQ 134 (256)
Q Consensus 114 ~~~~~g~~~HtD~~~lTlL~q 134 (256)
+...++..+|.++.++|++++
T Consensus 48 ~~~gf~~HPHrg~EtVTyvl~ 68 (277)
T 2p17_A 48 ERGTFDVHPHRGIETVTYVIS 68 (277)
T ss_dssp CTTCCCCEEECSEEEEEEEEE
T ss_pred CCCCCCCCCCCCcEEEEEEEE
Confidence 344677889999999999998
No 21
>2vf9_A Coat protein; virion, RNA-binding, capsid protein, structural protein, virus; 3.50A {Bacteriophage PRR1}
Probab=24.09 E-value=15 Score=25.58 Aligned_cols=18 Identities=28% Similarity=0.392 Sum_probs=14.6
Q ss_pred hHHhhCCcccCcCceecc
Q 042152 167 LEILTNGIYRSIVHRATV 184 (256)
Q Consensus 167 L~~~TnG~~ks~~HRV~~ 184 (256)
|..-|||+|||++.-|+.
T Consensus 49 lrktsngrykstlklvvp 66 (131)
T 2vf9_A 49 LRKTSNGRYKSTLKLVVP 66 (131)
T ss_dssp EEECTTSEEEEEEEEEEE
T ss_pred EEecCCCceeeeEEEEEE
Confidence 445699999999988764
No 22
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=23.04 E-value=2.1e+02 Score=22.04 Aligned_cols=63 Identities=10% Similarity=0.106 Sum_probs=37.3
Q ss_pred cccccCCCcEEEEEeCCCCCceEEeeCCeeEeccCCCCeE-EEEcCchhHHhhCCcccCcCceeccCCCCCeEE-EEEee
Q 042152 120 FNPHTDGSALTILLQLNEMDGLQIKKDGMRVPVKTLPDTF-IINVGENLEILTNGIYRSIVHRATVNSEKARLS-FATFY 197 (256)
Q Consensus 120 ~~~HtD~~~lTlL~q~~~v~GLqV~~~g~W~~V~p~pg~l-vVnvGd~L~~~TnG~~ks~~HRV~~~~~~~R~S-i~~F~ 197 (256)
...|.+ .=+.++.. +.+=+.|..+|+|+.+...+|.+ +|+.| +.||.....+ .++. +-+|.
T Consensus 95 ~H~H~~-~Ei~~Vl~--G~g~~~i~~~d~~~~~~l~~GDli~IP~g-------------~~H~~~~~~~-~~~~~ir~F~ 157 (179)
T 1zrr_A 95 EHTHGE-DEVRFFVE--GAGLFCLHIGDEVFQVLCEKNDLISVPAH-------------TPHWFDMGSE-PNFTAIRIFD 157 (179)
T ss_dssp CBEESS-CEEEEEEE--SCCCCCEECSSCEEEEECCCSCEEEECTT-------------CCBCCCCSSC-SSCEEEEEEC
T ss_pred ceECCh-heEEEEEc--ceEEEEEEeCCEEEEEEECCCCEEEECCC-------------CeEeeecCCC-ceEEEEEecc
Confidence 445555 55566665 44445555578999888877765 45555 5688776443 4443 44454
Q ss_pred eC
Q 042152 198 SM 199 (256)
Q Consensus 198 ~p 199 (256)
.+
T Consensus 158 ~~ 159 (179)
T 1zrr_A 158 NP 159 (179)
T ss_dssp CG
T ss_pred CC
Confidence 43
No 23
>2a1x_A Phytanoyl-COA dioxygenase; beta jelly roll, double-stranded beta-helix, structural GENO structural genomics consortium, SGC, oxidoreductase; HET: AKG; 2.50A {Homo sapiens} SCOP: b.82.2.9
Probab=21.14 E-value=2.7e+02 Score=22.84 Aligned_cols=29 Identities=10% Similarity=0.114 Sum_probs=21.3
Q ss_pred cCceeccCC-CCCeEEEEEeeeCCCCceEec
Q 042152 178 IVHRATVNS-EKARLSFATFYSMKLDGEIGP 207 (256)
Q Consensus 178 ~~HRV~~~~-~~~R~Si~~F~~p~~d~~i~p 207 (256)
++|+...+. ...|.++.+-+.+.. +...+
T Consensus 232 ~~H~s~~N~s~~~R~~~~~~y~~~~-~~y~~ 261 (308)
T 2a1x_A 232 LIHGSGQNKTQGFRKAISCHFASAD-CHYID 261 (308)
T ss_dssp CCEEECCBCSSSCEEEEEEEEEETT-CEECC
T ss_pred ccccCCCCCCCCceEEEEEEEECCC-ceEcc
Confidence 689988764 478999999888875 44333
Done!