BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042154
(377 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255555097|ref|XP_002518586.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542431|gb|EEF43973.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 377
Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust.
Identities = 235/378 (62%), Positives = 281/378 (74%), Gaps = 8/378 (2%)
Query: 1 MSFPSRLLS--CSFSTTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTG 58
M+F RLLS CS ST T TG S ++ +YKE NLKRLV+KFKK S+ RFRT TG
Sbjct: 1 MAFVIRLLSRTCSTSTQLT-TGTAARASSVKVLYKERNLKRLVEKFKKFSENDRFRTKTG 59
Query: 59 IYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEM 118
IY T++RLA AKRF WIEEILE QK+YKDI KEG+ ARLI LYGK+ MF+N+RKVFDEM
Sbjct: 60 IYEETIRRLAIAKRFNWIEEILEDQKKYKDIHKEGYNARLIRLYGKSNMFDNSRKVFDEM 119
Query: 119 PGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGS 178
P RNC++TV+SFNALL ACV SKKFDEVDGLF+ LP +L I+PD VSYNT+IK + + G+
Sbjct: 120 PDRNCKRTVVSFNALLAACVTSKKFDEVDGLFRKLPKELEIKPDTVSYNTVIKGYCEMGA 179
Query: 179 LDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNA 238
LD A +LL EME KG DLITFNTLL GFYSNG F D E+IW MV ++ P++RSYNA
Sbjct: 180 LDKAISLLVEMEMKGNPPDLITFNTLLNGFYSNGLFVDGERIWSQMVQKSIVPDIRSYNA 239
Query: 239 RLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY----NKS 294
+L GLA+ K+TK A+ L+ EM+SK I PDV +F ALIKGFV E NLEEAK WY N
Sbjct: 240 KLLGLALVKRTKDAVLLLQEMKSKGIKPDVISFNALIKGFVKEENLEEAKYWYCETRNSG 299
Query: 295 G-CGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEE 353
G CG +K F L+PFVCEKGDL FAF L K S +CLVD A L+ VV+ L KE ++++
Sbjct: 300 GDCGPDKFTFTTLIPFVCEKGDLRFAFELSKDVISRKCLVDMALLKCVVEGLVKESKIQD 359
Query: 354 AKELVELGKTNSYCRYNL 371
A ELV+LG N YCRY L
Sbjct: 360 ANELVKLGMNNGYCRYQL 377
>gi|359496226|ref|XP_003635182.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
mitochondrial-like [Vitis vinifera]
Length = 382
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 227/382 (59%), Positives = 279/382 (73%), Gaps = 5/382 (1%)
Query: 1 MSFPSRLLSCSFSTTATATGPKF--IGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTG 58
MSF SR L +FST+ AT + SV + IY+E NLKRLV KFKKSS+L RFRT TG
Sbjct: 1 MSFLSRRLYRAFSTSTAATAQATGNLESVFKDIYRERNLKRLVQKFKKSSELDRFRTKTG 60
Query: 59 IYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEM 118
IY TV+RLA+AKRFRWIEEILE QK+YKDIS+EGF RLI LYGK+ MF++A KVFDEM
Sbjct: 61 IYEETVRRLASAKRFRWIEEILEEQKKYKDISREGFAVRLITLYGKSGMFDHAFKVFDEM 120
Query: 119 PGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGS 178
P + CE++VLSFNALLGACVNSKKFD+V+G F +LP KL +EPDLVSYN +I D GS
Sbjct: 121 PDQKCERSVLSFNALLGACVNSKKFDKVEGFFSELPSKLSVEPDLVSYNIVINGLCDMGS 180
Query: 179 LDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNA 238
+DSA +L EMEKK + DLITFNTLL G Y++GRF D EKIW M N+ P++RSYNA
Sbjct: 181 MDSAVGMLDEMEKKSLEPDLITFNTLLNGCYTSGRFLDGEKIWGRMEKKNILPDIRSYNA 240
Query: 239 RLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SG 295
+L GL EK+ + + LV EM++K I PD ++F ALIKGF N+G ++EA WY K +
Sbjct: 241 KLVGLVSEKRMLEGIGLVEEMQTKGIKPDGYSFNALIKGFCNDGKVDEATNWYGKMREND 300
Query: 296 CGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAK 355
C +K F LVP CEKG D AF LCK F+ +CLVD+ LQ VD L K +V EAK
Sbjct: 301 CLPDKLTFATLVPLYCEKGSFDQAFELCKEIFNRKCLVDEVLLQNAVDGLVKGGKVVEAK 360
Query: 356 ELVELGKTNSYCRYNLKFPSEE 377
+LV+LG +NSY RYNLK P+++
Sbjct: 361 KLVQLGNSNSYRRYNLKIPTDK 382
>gi|359496216|ref|XP_002268636.2| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
mitochondrial [Vitis vinifera]
Length = 383
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 227/383 (59%), Positives = 282/383 (73%), Gaps = 6/383 (1%)
Query: 1 MSFPSRLLSCSFSTTATATGPKF--IGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTG 58
MSF SR L +FST+ AT + SV + IY+E NLKRLV KFKKSS+L RFRT TG
Sbjct: 1 MSFLSRRLYRAFSTSTAATAQATGNLESVFKDIYRERNLKRLVQKFKKSSELDRFRTKTG 60
Query: 59 IYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEM 118
IY TV+RLA+AKRFRWIEEILE QK+YKDIS+EGF RLI+LYGK+ MF++A KVFDEM
Sbjct: 61 IYEETVRRLASAKRFRWIEEILEEQKKYKDISREGFAVRLISLYGKSGMFDHAFKVFDEM 120
Query: 119 PGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGS 178
P + CE++VLSFNALLGACV+SKKFD+V+G F +LP KL +EPDLVSYN +IK D GS
Sbjct: 121 PDQKCERSVLSFNALLGACVHSKKFDKVEGFFSELPSKLSVEPDLVSYNIVIKGLCDMGS 180
Query: 179 LDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNA 238
+DSA +L EMEKK + DLITFNTLL G Y++GRF D EKIW M N+ P++RSYNA
Sbjct: 181 MDSAVGMLDEMEKKSLEPDLITFNTLLNGCYTSGRFLDGEKIWGRMEKKNILPDIRSYNA 240
Query: 239 RLDGL-AIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---S 294
+L GL + EK+ + + LV EM++K I PD ++F ALIKGF N+G ++EA WY K +
Sbjct: 241 KLVGLVSSEKRMLEGIGLVEEMQTKGIKPDGYSFNALIKGFCNDGKVDEATNWYGKMREN 300
Query: 295 GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA 354
C +K F LVP CEKG D AF LCK F+ +CLVD+ LQ VD L K +V EA
Sbjct: 301 DCSPDKLTFATLVPLYCEKGSFDQAFELCKEIFNRKCLVDEVLLQNAVDGLVKGGKVVEA 360
Query: 355 KELVELGKTNSYCRYNLKFPSEE 377
K+LV+LG +NSY RYNLK P+++
Sbjct: 361 KKLVQLGNSNSYRRYNLKIPTDK 383
>gi|224076660|ref|XP_002304977.1| predicted protein [Populus trichocarpa]
gi|222847941|gb|EEE85488.1| predicted protein [Populus trichocarpa]
Length = 381
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 222/380 (58%), Positives = 282/380 (74%), Gaps = 5/380 (1%)
Query: 1 MSFPSRLLSCSFST--TATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTG 58
MS SRL +FST +A AT + S+ +++E +LKRLV+KFKK+S+ RFRT +
Sbjct: 1 MSALSRLFRSTFSTATSAAATENTIVRSLSNEVFRERSLKRLVEKFKKASENERFRTKSA 60
Query: 59 IYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEM 118
IY T++RLA AK+FR++EEILE+QKQY+D+SKEGF ARLI+LYG + MF+NARKVFDEM
Sbjct: 61 IYKDTIRRLAAAKKFRYVEEILENQKQYQDMSKEGFNARLISLYGSSGMFDNARKVFDEM 120
Query: 119 PGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGS 178
R C +TVLSFNALLGACVNSKKFDEV GLF+ L +L IEPDLVSYNT++KAF + GS
Sbjct: 121 LERKCARTVLSFNALLGACVNSKKFDEVGGLFRGLSEELEIEPDLVSYNTVMKAFCEMGS 180
Query: 179 LDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNA 238
LDSA +LL E+EKKG++ DLITFNTLL G Y+NGRF E+IW+ M NV+P+ RSYN
Sbjct: 181 LDSAVSLLDEIEKKGLKPDLITFNTLLNGLYANGRFDAGERIWQRMKEKNVKPDGRSYNE 240
Query: 239 RLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSG 295
+L GLA+EK+ K A ++V EM+S+ I D+F++ ALI+GFVNEG+LEEAK WY KS
Sbjct: 241 KLLGLALEKRMKDATKVVEEMKSEGIEFDIFSYNALIRGFVNEGDLEEAKGWYGEIRKSD 300
Query: 296 CGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAK 355
+K FK L+PFV EKGD+ FAF+LCK S + V +A +Q V+D LAKE ++ EAK
Sbjct: 301 IKPDKLTFKTLIPFVVEKGDVAFAFDLCKDALSSKLAVKEALIQPVLDALAKESKINEAK 360
Query: 356 ELVELGKTNSYCRYNLKFPS 375
ELVEL K L PS
Sbjct: 361 ELVELSKARRSDSLKLTLPS 380
>gi|388512253|gb|AFK44188.1| unknown [Medicago truncatula]
Length = 376
Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust.
Identities = 213/375 (56%), Positives = 272/375 (72%), Gaps = 4/375 (1%)
Query: 6 RLLSCSFSTTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQ 65
R+L S T T P I S+ + +YKE NLK LV+KFKK+SD+ RFR GIY TV+
Sbjct: 3 RILQRSVHTI-TEKSPNNIKSISQDLYKEQNLKTLVEKFKKASDIDRFRKKNGIYEDTVR 61
Query: 66 RLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQ 125
RLA AKRFRW+ +I+EHQK Y DIS EGF+ARLI LYGK+ M +A+K+FDEMP RNCE+
Sbjct: 62 RLAGAKRFRWVRDIIEHQKSYADISNEGFSARLITLYGKSNMHRHAQKLFDEMPQRNCER 121
Query: 126 TVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTL 185
+VLS NALL A ++SK++D V+ LFK LP +L ++PDLVSYNT IKA ++KGS DSA ++
Sbjct: 122 SVLSLNALLAAYLHSKQYDVVERLFKKLPVQLSVKPDLVSYNTYIKALLEKGSFDSAVSV 181
Query: 186 LYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAI 245
L EMEK G+ DLITFNTLL G YS GRF D EK+WE + NV PN+R+YNARL GLA+
Sbjct: 182 LEEMEKDGVESDLITFNTLLDGLYSKGRFEDGEKLWEKLGEKNVVPNIRTYNARLLGLAV 241
Query: 246 EKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNKAI 302
K+ +A+E EM K + PD+F+F ALIKGF NEGNL+EAK+W+ KS +K
Sbjct: 242 AKRAGEAVEFYEEMEKKGVKPDLFSFNALIKGFANEGNLDEAKKWFGEIEKSEHDPSKRT 301
Query: 303 FKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGK 362
+ ++VPF+CEKGDL A + K+ F RC VD + L++VV +L E V EAKE+VE GK
Sbjct: 302 YAIIVPFLCEKGDLKTAIEMVKQIFLTRCRVDVSLLRIVVGKLVSESMVSEAKEIVERGK 361
Query: 363 TNSYCRYNLKFPSEE 377
NSYCRY L FP++E
Sbjct: 362 NNSYCRYKLNFPADE 376
>gi|147791424|emb|CAN76851.1| hypothetical protein VITISV_005999 [Vitis vinifera]
Length = 383
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 225/383 (58%), Positives = 279/383 (72%), Gaps = 6/383 (1%)
Query: 1 MSFPSRLLSCSFSTTATATGPKF--IGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTG 58
MSF SR L +FST+ AT + SV + IY+E NLKRLV KFKKSS+L RFRT TG
Sbjct: 1 MSFLSRRLYRAFSTSTAATAQATGNLESVFKDIYRERNLKRLVQKFKKSSELDRFRTKTG 60
Query: 59 IYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEM 118
IY TV+RLA+AKRFRWIEEILE QK+YKDIS+EGF RLI+LYGK+ MF++A KVFDEM
Sbjct: 61 IYEETVRRLASAKRFRWIEEILEEQKKYKDISREGFAVRLISLYGKSGMFDHAFKVFDEM 120
Query: 119 PGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGS 178
P + CE++VLSFN LLGACV SKKFD+V+G F +LP KL +EPDLVSYN +IK D GS
Sbjct: 121 PDQKCERSVLSFNXLLGACVXSKKFDKVEGFFSELPSKLSVEPDLVSYNIVIKGLCDMGS 180
Query: 179 LDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNA 238
+DSA +L EMEKK + DLITFNTLL Y++GRF D EKIW M N+ P++RSYNA
Sbjct: 181 MDSAVGMLDEMEKKSLEPDLITFNTLLNRXYTSGRFLDGEKIWGRMEKKNILPDIRSYNA 240
Query: 239 RLDGL-AIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---S 294
+L GL + EK+ + + LV EM++K I PD ++F ALIKGF N+G ++EA WY K +
Sbjct: 241 KLVGLVSSEKRMLEGIGLVEEMQTKGIKPDGYSFNALIKGFCNDGKVDEATNWYGKMREN 300
Query: 295 GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA 354
C +K F LVP CEKG D AF LCK F+ +CLVD+ LQ VD L K +V EA
Sbjct: 301 DCSPDKLTFATLVPLYCEKGSFDQAFELCKEIFNRKCLVDEVLLQNAVDGLVKGGKVVEA 360
Query: 355 KELVELGKTNSYCRYNLKFPSEE 377
K+LV+LG +NSY RYNLK P+++
Sbjct: 361 KKLVQLGNSNSYRRYNLKIPTDK 383
>gi|296090624|emb|CBI41008.3| unnamed protein product [Vitis vinifera]
Length = 379
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 211/350 (60%), Positives = 263/350 (75%), Gaps = 5/350 (1%)
Query: 11 SFSTTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANA 70
S S TA ATG + SV + IY+E NLKRLV KFKKSS+L RFRT TGIY TV+RLA+A
Sbjct: 23 SPSATAQATGN--LESVFKDIYRERNLKRLVQKFKKSSELDRFRTKTGIYEETVRRLASA 80
Query: 71 KRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSF 130
KRFRWIEEILE QK+YKDIS+EGF RLI+LYGK+ MF++A KVFDEMP + CE++VLSF
Sbjct: 81 KRFRWIEEILEEQKKYKDISREGFAVRLISLYGKSGMFDHAFKVFDEMPDQKCERSVLSF 140
Query: 131 NALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEME 190
NALLGACV+SKKFD++DG F++LP LG+ PD+VSYN I+ AF + GSLDSA ++L EME
Sbjct: 141 NALLGACVHSKKFDKIDGFFQELPGNLGVVPDVVSYNIIVNAFCEMGSLDSALSVLDEME 200
Query: 191 KKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTK 250
K G+ DLITFNTLL FY NG +AD EKIW+ M NV PNVRSYNA+L G+ E +
Sbjct: 201 KVGLEPDLITFNTLLNAFYQNGSYADGEKIWDLMKKNNVAPNVRSYNAKLRGVISENRMS 260
Query: 251 KALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLV 307
+A+EL+ EM++ I PDVFT +L+KGF N GNLEEAKRWY+ ++ +A + L+
Sbjct: 261 EAVELIDEMKTSGIKPDVFTLNSLMKGFCNAGNLEEAKRWYSEIARNELPPVRATYMTLI 320
Query: 308 PFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
PF+ EKGD D A LCK S R L++ A LQ V++ L KE ++EEA EL
Sbjct: 321 PFLVEKGDFDMATELCKEVCSRRWLIEPALLQQVLEGLVKESKIEEATEL 370
>gi|356521277|ref|XP_003529283.1| PREDICTED: pentatricopeptide repeat-containing protein At1g55890,
mitochondrial-like [Glycine max]
Length = 379
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 210/371 (56%), Positives = 266/371 (71%), Gaps = 4/371 (1%)
Query: 10 CSFSTTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLAN 69
C+ + AT I S+ +YKE LK +V+KFKK+SD RFR TGIY TV+RLA
Sbjct: 10 CTATEPATTIAAS-IRSISEDLYKEVKLKNVVEKFKKASDNDRFRKKTGIYEDTVRRLAG 68
Query: 70 AKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLS 129
A+RFRW+ +ILEHQKQY DIS EGF+ARLI+LYGK+ M ++ARKVFDEMP RNC +TVLS
Sbjct: 69 ARRFRWVRDILEHQKQYSDISNEGFSARLISLYGKSGMTKHARKVFDEMPQRNCSRTVLS 128
Query: 130 FNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEM 189
NALL A ++S K+D V LF+DLP +L I+PDLV+YNTIIKAF +KGS DSA ++L E+
Sbjct: 129 LNALLAAYLHSHKYDVVQELFRDLPTQLSIKPDLVTYNTIIKAFCEKGSFDSALSVLREI 188
Query: 190 EKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQT 249
E+KG+ D ITFNTLL G YS GRF + EK+WE M NV P VRSY ++L GLA K+
Sbjct: 189 EEKGLSPDSITFNTLLDGLYSKGRFEEGEKVWEQMSVNNVAPGVRSYCSKLVGLAEVKKA 248
Query: 250 KKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLL 306
+A+EL EM + PD+F A+IKGFVNEGNL+EAK+W+ KS +K + ++
Sbjct: 249 GEAVELFREMEKVGVKPDLFCINAVIKGFVNEGNLDEAKKWFGEIAKSEYDPDKNTYSII 308
Query: 307 VPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKTNSY 366
VPF+CEKGD A +CK F+ RC VD LQ VVD+LA E + EAKE+VE+GKTN Y
Sbjct: 309 VPFLCEKGDFKTAIEMCKEIFNNRCRVDATLLQGVVDKLASEGMITEAKEIVEIGKTNRY 368
Query: 367 CRYNLKFPSEE 377
CRY L P++E
Sbjct: 369 CRYRLDLPAKE 379
>gi|356524760|ref|XP_003530996.1| PREDICTED: pentatricopeptide repeat-containing protein At1g55890,
mitochondrial-like [Glycine max]
Length = 381
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 204/357 (57%), Positives = 260/357 (72%), Gaps = 3/357 (0%)
Query: 24 IGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQ 83
I S+ +YKE LK +V+KFKK+SD+ RFR TGIY TV+RLA A+RFRWI +ILEHQ
Sbjct: 25 IKSISEDLYKEVKLKNVVEKFKKASDIDRFRKKTGIYEDTVRRLAGARRFRWIRDILEHQ 84
Query: 84 KQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKF 143
KQY DIS EGF+ARLI+LYGK+ M ++ARKVFDEMP RNC +TVLS NALL A ++S+K+
Sbjct: 85 KQYSDISNEGFSARLISLYGKSGMTKHARKVFDEMPQRNCSRTVLSLNALLAAYLHSRKY 144
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT 203
D V LF+DLP +L I+PDLV+YNTIIKAF +KGS DSA ++ E+E+KG+ D ITFNT
Sbjct: 145 DIVGELFRDLPTQLSIKPDLVTYNTIIKAFCEKGSFDSALSVFQEIEEKGLSPDSITFNT 204
Query: 204 LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
LL G YS GRF + EK+WE M NV P VRSY ++L GLA K+ +A+ L EM
Sbjct: 205 LLDGLYSKGRFEEGEKVWEQMGVKNVAPGVRSYCSKLVGLAEVKKMGEAVVLFREMEKLG 264
Query: 264 INPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAF 320
+ PD+F A+IKGFVNEGNL+EAK+W+ K ++ + ++VPF+CEKGD A
Sbjct: 265 VKPDLFCINAVIKGFVNEGNLDEAKKWFGEIAKFEYDPDRNTYSIIVPFLCEKGDFKTAI 324
Query: 321 NLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKTNSYCRYNLKFPSEE 377
++CK F+ RC VD LQ VVD+LA E EAKE+VE+GKTN YCRY L P+E+
Sbjct: 325 DMCKEIFNNRCRVDATLLQGVVDKLASEGMDTEAKEIVEIGKTNRYCRYRLDLPAEK 381
>gi|224114227|ref|XP_002316702.1| predicted protein [Populus trichocarpa]
gi|222859767|gb|EEE97314.1| predicted protein [Populus trichocarpa]
Length = 396
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 209/379 (55%), Positives = 269/379 (70%), Gaps = 5/379 (1%)
Query: 1 MSFPSRLLSCSF--STTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTG 58
MS RLL + ST+A A+ S I KE NL+ LV+KFK +S FRT T
Sbjct: 1 MSSLLRLLGRALPASTSAAASDTIKAKSYWTEIIKERNLEHLVEKFKNASVDEDFRTKTF 60
Query: 59 IYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEM 118
+Y ++ RLA A++F ++EEILE QKQY+DI KEGF ARLI+LYG A MF+NARKVFDEM
Sbjct: 61 VYKNSIHRLAAARKFNYVEEILEDQKQYEDIYKEGFNARLISLYGVAGMFDNARKVFDEM 120
Query: 119 PGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGS 178
R C +TV+SFNALLGACVNSKKFDE +GLFK L +L IEPDLVSYNT++KAF + GS
Sbjct: 121 FERKCARTVVSFNALLGACVNSKKFDEAEGLFKGLSKELEIEPDLVSYNTVLKAFCEMGS 180
Query: 179 LDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNA 238
+DSA TLL EMEKKG+ DLITFNTLL GFY+ GRF D E+IWE M NV P++RSYNA
Sbjct: 181 MDSAATLLDEMEKKGLEPDLITFNTLLHGFYAKGRFVDGERIWEQMKEKNVEPDIRSYNA 240
Query: 239 RLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSG 295
+L GL +EK+ + +++V EM+S+ I D F++ LI+GFVNEG+L++AK WY+ +SG
Sbjct: 241 KLLGLTLEKRMEDVVKVVEEMKSEGIQLDTFSYSTLIRGFVNEGDLKKAKHWYHEIGRSG 300
Query: 296 CGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAK 355
C +K + L+PF +KGD FA+ +CK + LV A +Q VVD LAK+ R+EEAK
Sbjct: 301 CKRDKLTLEGLIPFALQKGDFMFAYGICKDVLCSKLLVQNALIQSVVDALAKDSRLEEAK 360
Query: 356 ELVELGKTNSYCRYNLKFP 374
+LV LG++ Y L+ P
Sbjct: 361 KLVGLGESCRAHSYKLELP 379
>gi|224114223|ref|XP_002316701.1| predicted protein [Populus trichocarpa]
gi|222859766|gb|EEE97313.1| predicted protein [Populus trichocarpa]
Length = 386
Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust.
Identities = 210/385 (54%), Positives = 269/385 (69%), Gaps = 10/385 (2%)
Query: 1 MSFPSRLLSCSFSTTATATG-------PKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRF 53
MS SRLL +FST ATA P S+ IYKE N K+LV KFK +S F
Sbjct: 1 MSSLSRLLRRAFSTVATAATTITSDAAPDTAKSLSYLIYKERNHKKLVKKFKNASVNEHF 60
Query: 54 RTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARK 113
RT IY T++RL+ +++F ++EEILE QKQYKD+SKEGF ARLI+LYG MF++ARK
Sbjct: 61 RTKVAIYKETIRRLSVSRKFDYVEEILEDQKQYKDMSKEGFNARLISLYGSVGMFDHARK 120
Query: 114 VFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAF 173
VFDEM R C +TV+SFNALLGAC++SK FDEV+GLF+ L ++ IEPDL+SYNT+IKAF
Sbjct: 121 VFDEMRERQCARTVMSFNALLGACLSSKNFDEVEGLFRGLSKEIKIEPDLISYNTVIKAF 180
Query: 174 VDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNV 233
+ GSLDSA +LL EM++KG+ DLITFNTLL GFY+ GRF D E+IWE M NV P+V
Sbjct: 181 CEMGSLDSAVSLLDEMKRKGLEPDLITFNTLLHGFYAKGRFVDGERIWEQMKEKNVEPDV 240
Query: 234 RSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY-- 291
RSYNA+L GL +EK+ + +++V EM+S+ I D F++ ALI+GFVNEG+L+ AK WY
Sbjct: 241 RSYNAKLLGLTLEKRMEDVVKVVEEMKSEGIQLDTFSYSALIRGFVNEGDLKNAKHWYLE 300
Query: 292 -NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELR 350
+SGC +K + L+PF +KGD FA+ +CK + LV A +Q VVD LAKE R
Sbjct: 301 IGRSGCKRDKLTLEGLIPFALQKGDFMFAYGICKDVLCSKLLVQNALIQSVVDALAKESR 360
Query: 351 VEEAKELVELGKTNSYCRYNLKFPS 375
+E AKELV LG + Y L PS
Sbjct: 361 MEAAKELVNLGDAHHTYSYKLNLPS 385
>gi|359496222|ref|XP_002263756.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g13150-like [Vitis vinifera]
Length = 379
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 202/380 (53%), Positives = 261/380 (68%), Gaps = 4/380 (1%)
Query: 1 MSFPSRLLSCSFSTTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIY 60
MS +R L F++ AT ++ R ++LK +VDKFKKSSD RFR+ G Y
Sbjct: 1 MSSLARRLRGIFTSPLPATTKTPAKTIKRSSSNNSSLKEMVDKFKKSSDSKRFRSRYGYY 60
Query: 61 TGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPG 120
V LA AK+F +IE+ILEHQKQY +IS E F RL+ LYGKA MFE+A K+FDE+P
Sbjct: 61 EKAVLTLAKAKKFSFIEDILEHQKQYNEISTEVFAVRLMTLYGKAGMFEHAHKLFDELPK 120
Query: 121 RNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLD 180
NCE+TV+SFNALL CVNSKKFD++DG F++LP LG+ PD+VSYN I+ AF + GSLD
Sbjct: 121 LNCERTVVSFNALLSVCVNSKKFDKIDGFFQELPGNLGVVPDVVSYNIIVNAFCEMGSLD 180
Query: 181 SANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARL 240
SA ++L EMEK G+ DLITFNTLL FY NG +AD EKIW+ M NV PNVRSYNA+L
Sbjct: 181 SALSVLDEMEKVGLEPDLITFNTLLNAFYQNGSYADGEKIWDLMKKNNVAPNVRSYNAKL 240
Query: 241 DGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCG 297
G+ E + +A+EL+ EM++ I PDVFT +L+KGF N GNLEEAKRWY+ ++
Sbjct: 241 RGVISENRMSEAVELIDEMKTSGIKPDVFTLNSLMKGFCNAGNLEEAKRWYSEIARNELP 300
Query: 298 MNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
+A + L+PF+ EKGD D A LCK S R L++ A LQ V++ L KE ++EEA EL
Sbjct: 301 PVRATYMTLIPFLVEKGDFDMATELCKEVCSRRWLIEPALLQQVLEGLVKESKIEEATEL 360
Query: 358 VELGKTNSYCRYNLKFPSEE 377
VEL K + R L+ PS++
Sbjct: 361 VELAKLKKF-RITLELPSDK 379
>gi|359496212|ref|XP_003635178.1| PREDICTED: pentatricopeptide repeat-containing protein At1g55890,
mitochondrial-like [Vitis vinifera]
Length = 379
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 197/380 (51%), Positives = 259/380 (68%), Gaps = 4/380 (1%)
Query: 1 MSFPSRLLSCSFSTTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIY 60
MS +R L F++ AT ++ R + LK ++DKFKKSSD RFR+ G Y
Sbjct: 1 MSSLARRLRGIFTSPLPATTKTPAKTIKRSSSNNSTLKEMIDKFKKSSDSKRFRSRYGYY 60
Query: 61 TGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPG 120
V LA AK+ +IE+ILEHQ+QY +IS E F RL+ LYG A MF++A K+FDE+P
Sbjct: 61 EKAVLTLAKAKKLSFIEDILEHQEQYNEISTEVFAVRLMTLYGTAGMFDHAHKLFDELPK 120
Query: 121 RNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLD 180
NCE+TV+SFNALL ACVNSKKFD++DG F++LP LGI PD+VSYN ++ AF + GSLD
Sbjct: 121 LNCERTVMSFNALLSACVNSKKFDKIDGFFQELPGNLGIVPDVVSYNILVNAFCEMGSLD 180
Query: 181 SANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARL 240
SA ++L EMEK G+ DLITFNTLL FY NG +AD EKIW+ M NV PNVRSYNA+L
Sbjct: 181 SALSVLDEMEKVGLEPDLITFNTLLNAFYQNGSYADGEKIWDLMKKNNVAPNVRSYNAKL 240
Query: 241 DGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCG 297
G+ E + +A+EL+ EM++ I PDVFT +L+KGF N GNLEEAKRWY+ ++
Sbjct: 241 RGVISENRMSEAVELIDEMKTSGIKPDVFTLNSLMKGFCNAGNLEEAKRWYSEIARNELP 300
Query: 298 MNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
+A + L+PF+ EKGD + A LCK S R L++ A LQ V++ L KE ++EEA EL
Sbjct: 301 PVRATYMTLIPFLVEKGDFEMATELCKEVCSRRWLIEPALLQQVLEGLVKESKIEEATEL 360
Query: 358 VELGKTNSYCRYNLKFPSEE 377
VEL K + R L+ PS++
Sbjct: 361 VELEKLKKF-RITLELPSDK 379
>gi|18399887|ref|NP_566445.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273726|sp|Q9LK57.1|PP226_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g13160, mitochondrial; Flags: Precursor
gi|10172603|dbj|BAB01407.1| unnamed protein product [Arabidopsis thaliana]
gi|22531265|gb|AAM97136.1| expressed protein [Arabidopsis thaliana]
gi|27311983|gb|AAO00957.1| expressed protein [Arabidopsis thaliana]
gi|332641782|gb|AEE75303.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 394
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/375 (52%), Positives = 260/375 (69%), Gaps = 6/375 (1%)
Query: 6 RLLSCSFSTTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQ 65
R S + AT + PK S+I + E + K + +KFKK+ FR N +Y TV+
Sbjct: 22 RFFSAVTAAAATPSPPK--PSLITLVNDERDPKFITEKFKKACQAEWFRKNIAVYERTVR 79
Query: 66 RLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQ 125
RLA AK+F W+EEILE Q +Y ++SKEGF AR+I LYG+ MFENA+KVFDEMP RNC++
Sbjct: 80 RLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQKVFDEMPERNCKR 139
Query: 126 TVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTL 185
T LSFNALL ACVNSKKFD V+G+FK+LP KL IEPD+ SYNT+IK KGS A L
Sbjct: 140 TALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVAL 199
Query: 186 LYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAI 245
+ E+E KG++ D ITFN LL Y+ G+F + E+IW MV NV+ ++RSYNARL GLA+
Sbjct: 200 IDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAM 259
Query: 246 EKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNKAI 302
E ++++ + L +++ E+ PDVFTF A+IKGFV+EG L+EA WY K+GC K +
Sbjct: 260 ENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFV 319
Query: 303 FKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGK 362
F L+P +C+ GDL+ A+ LCK F++R LVD+A LQ VVD L K + +EA+E+VEL K
Sbjct: 320 FNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEAEEIVELAK 379
Query: 363 TNSYCRYNLK-FPSE 376
TN Y + L+ FP E
Sbjct: 380 TNDYLQCKLRLFPKE 394
>gi|21617993|gb|AAM67043.1| unknown [Arabidopsis thaliana]
Length = 394
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/375 (52%), Positives = 261/375 (69%), Gaps = 6/375 (1%)
Query: 6 RLLSCSFSTTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQ 65
R S + AT + PK S+I + E + K + +KFKK+ FR N +Y TV+
Sbjct: 22 RFFSAVTAAAATPSPPK--PSLITLVNDERDPKFITEKFKKACQAEWFRKNIAVYERTVR 79
Query: 66 RLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQ 125
RLA AK+F W+EEILE Q +Y ++SKEGF AR+I LYG+ MFENA+KVFDEMP RNC++
Sbjct: 80 RLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQKVFDEMPERNCKR 139
Query: 126 TVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTL 185
TVLSFNALL ACVNSKKFD V+G+F++LP KL IEPD+ SYNT+IK KGS A L
Sbjct: 140 TVLSFNALLNACVNSKKFDLVEGIFEELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVAL 199
Query: 186 LYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAI 245
+ E+E KG++ D ITFN LL Y+ G+F + E+IW MV NV+ ++RSYNARL GLA+
Sbjct: 200 IDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAM 259
Query: 246 EKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNKAI 302
E ++++ + L +++ E+ PDVFTF A+IKGFV+EG L+EA WY K+GC K +
Sbjct: 260 ENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFV 319
Query: 303 FKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGK 362
F L+P +C+ GDL+ A+ LCK F++R LVD+A LQ VVD L K + +EA+E+VEL K
Sbjct: 320 FNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEAEEIVELAK 379
Query: 363 TNSYCRYNLK-FPSE 376
TN Y + L+ FP E
Sbjct: 380 TNDYLQCKLRLFPKE 394
>gi|147791423|emb|CAN76850.1| hypothetical protein VITISV_005998 [Vitis vinifera]
Length = 340
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 191/341 (56%), Positives = 242/341 (70%), Gaps = 4/341 (1%)
Query: 40 LVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLI 99
+VDKFKKSSD RFR+ G Y V LA AK+F +IE+ILEHQKQY +IS E F RL+
Sbjct: 1 MVDKFKKSSDSKRFRSRYGYYEKAVLTLAKAKKFSFIEDILEHQKQYNEISTEVFAVRLM 60
Query: 100 ALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGI 159
LYGKA MFE+A K+FDE P NCE+TV+SFNALL CV SKKFD++DG F++LP LG+
Sbjct: 61 TLYGKAGMFEHAHKLFDEXPKLNCERTVVSFNALLSVCVXSKKFDKIDGFFQELPGNLGV 120
Query: 160 EPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEK 219
PD+VSYN I+ AF + GSLDSA ++L EMEK G+ DLITFNTLL FY NG +AD EK
Sbjct: 121 VPDVVSYNIIVNAFCEMGSLDSALSVLDEMEKVGLEPDLITFNTLLNAFYQNGSYADGEK 180
Query: 220 IWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFV 279
IW+ M NV PNVRSYNA+L G+ E + +A+EL+ EM++ I PDVFT +L+KGF
Sbjct: 181 IWDLMKKNNVAPNVRSYNAKLRGVISENRMSEAVELIDEMKTSGIKPDVFTLNSLMKGFC 240
Query: 280 NEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQA 336
N GNLEEAKRWY+ ++ +A + L+PF+ EKGD D A LCK S R L++ A
Sbjct: 241 NAGNLEEAKRWYSEIARNELPPVRATYMTLIPFLVEKGDFDMATELCKEVCSRRWLIEPA 300
Query: 337 PLQLVVDRLAKELRVEEAKELVELGKTNSYCRYNLKFPSEE 377
LQ V++ L KE ++EEA ELVEL K + R L+ PS++
Sbjct: 301 LLQQVLEGLVKESKIEEATELVELAKLKKF-RITLELPSDK 340
>gi|297834132|ref|XP_002884948.1| hypothetical protein ARALYDRAFT_478692 [Arabidopsis lyrata subsp.
lyrata]
gi|297330788|gb|EFH61207.1| hypothetical protein ARALYDRAFT_478692 [Arabidopsis lyrata subsp.
lyrata]
Length = 394
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/382 (50%), Positives = 260/382 (68%), Gaps = 7/382 (1%)
Query: 1 MSFPS--RLLSCSFSTTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTG 58
+S P+ R S + AT + P+ S+I + E + K +++KFKK+ FR N
Sbjct: 15 LSTPTNRRFFSAVTAAAATPSSPR--PSLITLVNDERDPKFIMEKFKKACQAEWFRKNIA 72
Query: 59 IYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEM 118
+Y TV+RLA AK+F W+EEILE Q +Y ++SKEGF AR+I LYG+ MFENA+KVFDEM
Sbjct: 73 VYEKTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQKVFDEM 132
Query: 119 PGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGS 178
P RNC++TVLSFNALL ACVNSKKFD V+ +FK+LP K+ IEPD+ SYNT+IK KGS
Sbjct: 133 PERNCKRTVLSFNALLNACVNSKKFDLVESIFKELPGKISIEPDVASYNTLIKGLCGKGS 192
Query: 179 LDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNA 238
A L+ E+E KG++ D ITFN LL Y+ G+F + EKIW MV V+ ++RSYNA
Sbjct: 193 FTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEKIWARMVEKKVKRDIRSYNA 252
Query: 239 RLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY---NKSG 295
RL GLA+EK++++ + L E++ E+ PDVFTF A+IKGF EG L+EA WY K+G
Sbjct: 253 RLLGLAMEKKSEEMVSLFDELKVNELKPDVFTFTAMIKGFAGEGRLDEAITWYKEIEKNG 312
Query: 296 CGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAK 355
C K +F L+P +C+ DL+ A+ LCK F +R LVD+A LQ VVD L K + +EA+
Sbjct: 313 CRPMKFVFNSLLPAICKACDLESAYELCKEIFVKRLLVDEAVLQEVVDTLVKGSKQDEAE 372
Query: 356 ELVELGKTNSYCRYNLKFPSEE 377
E+VEL KTN Y + L+ +E
Sbjct: 373 EIVELAKTNDYLQCKLRLSPKE 394
>gi|15222796|ref|NP_175985.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174230|sp|Q9LG23.1|PPR82_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g55890, mitochondrial; Flags: Precursor
gi|8778306|gb|AAF79315.1|AC002304_8 F14J16.14 [Arabidopsis thaliana]
gi|18650654|gb|AAL75896.1| At1g55890/F14J16_4 [Arabidopsis thaliana]
gi|53828645|gb|AAU94432.1| At1g55890 [Arabidopsis thaliana]
gi|332195194|gb|AEE33315.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 398
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/380 (50%), Positives = 266/380 (70%), Gaps = 7/380 (1%)
Query: 2 SFPSRLLSCSFSTTATATGP-KFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIY 60
S + ++S + TA + P K + S++ G E N KR+V+KFKK+ + RFRTN +Y
Sbjct: 21 SSAATVVSEPTAVTAAISPPQKSLTSLVNG---ERNPKRIVEKFKKACESERFRTNIAVY 77
Query: 61 TGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPG 120
TV+RL AKR ++EEILE QK+Y+D+SKEGF AR+I+LYGKA MFENA+KVF+EMP
Sbjct: 78 DRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQKVFEEMPN 137
Query: 121 RNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLD 180
R+C+++VLSFNALL A SKKFD V+ LF +LP KL I+PD+VSYNT+IKA +K SL
Sbjct: 138 RDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLP 197
Query: 181 SANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARL 240
A LL E+E KG++ D++TFNTLLL Y G+F E+IW MV NV ++R+YNARL
Sbjct: 198 EAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARL 257
Query: 241 DGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCG 297
GLA E ++K+ + L GE+++ + PDVF+F A+I+G +NEG ++EA+ WY K G
Sbjct: 258 LGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYR 317
Query: 298 MNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
+KA F LL+P +C+ GD + A L K TFS+R LV Q LQ +VD L K + EEA+E+
Sbjct: 318 PDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEAEEI 377
Query: 358 VELGKTNSYCRYNLKFPSEE 377
V++ KTN + + L PS+E
Sbjct: 378 VKIAKTNDFLKLKLNLPSQE 397
>gi|255555093|ref|XP_002518584.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542429|gb|EEF43971.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 377
Score = 354 bits (908), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 183/364 (50%), Positives = 244/364 (67%), Gaps = 9/364 (2%)
Query: 14 TTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRF 73
TT+TAT P + KE L++LV ++K+SS+ FR Y+ V+RL+ AK+F
Sbjct: 17 TTSTATIPPSTVNT-----KERKLQKLVQRYKRSSESPEFRARHRFYSTIVRRLSFAKQF 71
Query: 74 RWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNAL 133
+E+ LEHQK + DI+ E FT RLI+LYGKA M ++A ++FDEMP C +TV SFNAL
Sbjct: 72 SMVEDFLEHQKNFADITNEQFTIRLISLYGKAGMLDHAHRLFDEMPDLKCTRTVRSFNAL 131
Query: 134 LGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKG 193
L AC++S KFD+V G +D P KLGI PD+VS+N +IK + + G+LDS +L EMEK+G
Sbjct: 132 LSACIDSGKFDKVQGFLRDFPVKLGITPDVVSFNIVIKGYCEIGNLDSGVLVLCEMEKRG 191
Query: 194 IRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKAL 253
I DLITFNTLL GFY NGRF D EKIW M + NV PNVRSYN+RL GL +E + +A+
Sbjct: 192 IEPDLITFNTLLNGFYGNGRFVDGEKIWTLMESKNVVPNVRSYNSRLRGLELENRVMEAV 251
Query: 254 ELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFV 310
EL+GEM +K I PDV ++ A+IKG N+ N+EE K WY K +G ++ + L+P++
Sbjct: 252 ELLGEMENKGIRPDVMSYNAVIKGLCNDENVEEVKNWYRKLKENGRMPDRVTYMTLIPYL 311
Query: 311 CEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKTNSYCRYN 370
+KGDLD A LC ++ LV+ Q VVD L K RVEEAK+LVE GK+N + Y
Sbjct: 312 RQKGDLDGAVELCIEIMNKGLLVNATLFQHVVDELVKLSRVEEAKDLVERGKSNKHS-YK 370
Query: 371 LKFP 374
L P
Sbjct: 371 LSLP 374
>gi|297847954|ref|XP_002891858.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337700|gb|EFH68117.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 395
Score = 352 bits (903), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 193/379 (50%), Positives = 262/379 (69%), Gaps = 10/379 (2%)
Query: 6 RLLSCSFSTTATATG---PK-FIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYT 61
R S + TTA + P+ + S++ G E N +R+V+KFKK+ + RFR N +Y
Sbjct: 19 RFSSAATVTTAVSAAISPPQNSLTSIVNG---ERNPQRIVEKFKKACESERFRNNIAVYD 75
Query: 62 GTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGR 121
TV+RL AKR ++EEILE QK+Y+D+SKEGF AR+I+LYGKA MFENA+KVFDEMP R
Sbjct: 76 RTVRRLVAAKRLHFVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQKVFDEMPDR 135
Query: 122 NCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDS 181
NC+++VLSFNALL A SKKFD V+ LF +LP KL I+PD+VSYNT+IKA +K SL
Sbjct: 136 NCKRSVLSFNALLSAYGLSKKFDVVEQLFNELPGKLSIKPDIVSYNTLIKALCEKDSLPE 195
Query: 182 ANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLD 241
A LL E E KG++ D++TFNTLLL Y G+F E+IW +V NV ++R+YNARL
Sbjct: 196 AVALLDEFENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKLVEKNVPIDIRTYNARLL 255
Query: 242 GLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGM 298
GLA E ++K+ + L E+++ I PDVF+F A+I+G +N+G ++EA+ WY K G
Sbjct: 256 GLASEVKSKELVSLFEELKASGIKPDVFSFNAMIRGSINQGKMDEAESWYKEIVKHGYRP 315
Query: 299 NKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
+KA F LL+P +C+ GD +FA L K TFS+R LV Q LQ +VD L K + EEA+E+V
Sbjct: 316 DKATFALLLPAMCKAGDFEFAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEAEEIV 375
Query: 359 ELGKTNSYCRYNLKFPSEE 377
E+ KTN + + L PS+E
Sbjct: 376 EIAKTNDFLKLKLILPSQE 394
>gi|224076667|ref|XP_002304978.1| predicted protein [Populus trichocarpa]
gi|222847942|gb|EEE85489.1| predicted protein [Populus trichocarpa]
Length = 373
Score = 340 bits (871), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 175/361 (48%), Positives = 235/361 (65%), Gaps = 13/361 (3%)
Query: 9 SCSFSTTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLA 68
S SF A AT K K L+++V +FKK S+ FR+ IY TV+RL
Sbjct: 18 SPSFRPPAAATATK----------KRGTLEKMVSRFKKCSESSSFRSRYDIYAITVKRLI 67
Query: 69 NAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVL 128
R I EIL+HQK + D++ E FTA LI LYGKA MF++ARK+FDEMP C +TV
Sbjct: 68 KYNRLSMINEILDHQKNFPDMTNETFTAHLIYLYGKAGMFDDARKLFDEMPDLKCPRTVF 127
Query: 129 SFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
SFNALL AC+N+++FDE+ L D +LGI D+VSY+ I F G L SA + E
Sbjct: 128 SFNALLLACINARRFDEIKKLLADFRSELGITFDVVSYSIAINGFCKMGDLVSAEMVFDE 187
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
M K + +LITFNTLL GFY NG+FAD E+IW MV MNV P+VRSYNA+L LA+E +
Sbjct: 188 MIKSDVEPNLITFNTLLNGFYLNGKFADGERIWSRMVEMNVVPDVRSYNAKLHALALENR 247
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKL 305
K+A+E+V EMR K + DVF+F ALI+GF+N +LEEAK+WY + GC N+ F+
Sbjct: 248 MKEAIEVVEEMRDKGLELDVFSFNALIRGFLNGEDLEEAKQWYGEMRRHGCEPNRVTFQF 307
Query: 306 LVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKTNS 365
L+PF+CEKGD+ FA +C+ F ++ LQLVV+RL E ++++A++LV+ GK +
Sbjct: 308 LIPFLCEKGDVGFAVEICEEIFDKKWHARAEVLQLVVNRLVMEAKIQDAEKLVQDGKKHK 367
Query: 366 Y 366
Y
Sbjct: 368 Y 368
>gi|147819559|emb|CAN76564.1| hypothetical protein VITISV_029137 [Vitis vinifera]
Length = 449
Score = 332 bits (850), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 167/291 (57%), Positives = 207/291 (71%), Gaps = 7/291 (2%)
Query: 44 FKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYG 103
FKKSSD RFR+ G Y V LA AK+F +IE+ILEHQKQY +IS E F RLI LYG
Sbjct: 157 FKKSSDSKRFRSRYGYYEKAVLTLAKAKKFSFIEDILEHQKQYNEISTEVFAVRLITLYG 216
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
KA MFE+A K+FDEMP NCE+TV+SFNALL ACVNSKKFD++DG F++LP LGI PD+
Sbjct: 217 KAGMFEHAHKLFDEMPKLNCERTVMSFNALLSACVNSKKFDKIDGFFQELPRNLGIVPDV 276
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
VSYN ++ AF + GSLDSA ++L EMEK G+ DLITFNTLL FY +G AD EKIW+
Sbjct: 277 VSYNILVNAFCEMGSLDSALSVLDEMEKVGLEPDLITFNTLLNVFYQSGSNADGEKIWDL 336
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M NV PNVRSYNA+L G+ E + +A+ L+ EM++ I PDVFT +L+KGF N GN
Sbjct: 337 MKKNNVAPNVRSYNAKLRGVISENRMSEAVNLIDEMKTSGIKPDVFTLNSLMKGFCNAGN 396
Query: 284 LEEAKRWYNKSGCGMN-----KAIFKLLVPFVCEKGDLDFAFNLCKRTFSE 329
LEEAKRW+ S +N +A + L+PF+ EK D + A LCK F +
Sbjct: 397 LEEAKRWH--SEIAINELPPVRATYMRLIPFLVEKDDFEMATELCKEVFQK 445
>gi|449479641|ref|XP_004155661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g55890,
mitochondrial-like [Cucumis sativus]
Length = 398
Score = 332 bits (850), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 166/377 (44%), Positives = 244/377 (64%), Gaps = 16/377 (4%)
Query: 2 SFPSRLLS-CSFSTTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIY 60
S PS C+ ST AT + E +L+ +VDKF K+++ RFR G +
Sbjct: 30 SLPSSATQKCNKSTAATP------------LTAEEHLQNIVDKFIKNTESQRFRHKKGTF 77
Query: 61 TGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPG 120
TV+ LA K+F IE+I+E QK+Y+DI EGF RLI LYGKA MF +ARK+FDE+P
Sbjct: 78 DSTVRLLAVRKKFSLIEDIIEAQKKYEDIKVEGFATRLIKLYGKAGMFSHARKLFDELPE 137
Query: 121 RNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLD 180
NCE+TV SFN+LL +CV SK+FD+V+ +F+++P ++ I+ D++SYN +I AF + +LD
Sbjct: 138 LNCERTVKSFNSLLASCVKSKEFDQVEKIFREVPQEVSIKADVISYNIVINAFCEMDALD 197
Query: 181 SANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARL 240
A ++MEK G+ +L+TFNTLL Y G+F D E++W TM N N+ P++ SYNARL
Sbjct: 198 KAILFFHDMEKNGMEPNLVTFNTLLTALYRKGQFFDGERVWATMENKNIAPDLVSYNARL 257
Query: 241 DGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCG 297
G+ +EK+ + +EL+ +M KEI PDV+++ LIKGF +G+LEEAK+WY K S
Sbjct: 258 RGMVLEKRIQDGIELLAKMEEKEIKPDVYSYNILIKGFCQDGDLEEAKKWYYKLKESEVD 317
Query: 298 MNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
+++L+P +CE+GD D LCK + + A +Q VV+ LA+ ++EEAK+L
Sbjct: 318 PIATTYRILLPLLCEQGDFDSGLQLCKEAIDKGFVFHTAEVQRVVNGLAEVSKIEEAKDL 377
Query: 358 VELGKTNSYCRYNLKFP 374
VEL + + ++ LK P
Sbjct: 378 VELYNSKNNLKFKLKLP 394
>gi|449434360|ref|XP_004134964.1| PREDICTED: uncharacterized protein LOC101207147 [Cucumis sativus]
Length = 2802
Score = 320 bits (820), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 162/363 (44%), Positives = 233/363 (64%), Gaps = 16/363 (4%)
Query: 2 SFPSRLLS-CSFSTTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIY 60
S PS C+ ST AT + E +L+ +VDKF K+++ RFR G Y
Sbjct: 1267 SLPSSATQKCNKSTAATP------------LTAEEHLQNIVDKFIKNTESQRFRHQKGTY 1314
Query: 61 TGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPG 120
TV+ LA K+F IE+I+E QK+Y+DI EGF RLI LYGKA MF +ARK+FDE+P
Sbjct: 1315 DSTVRLLAVRKKFSLIEDIIEAQKKYEDIKVEGFATRLIKLYGKAGMFSHARKLFDELPE 1374
Query: 121 RNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLD 180
NCE+TV SFN+LL +CV SK+ D+V+ +F+++P ++ I+ D++SYN +I AF + +LD
Sbjct: 1375 LNCERTVKSFNSLLASCVKSKELDQVEKIFREVPQEVSIKADVISYNIVINAFCEMDALD 1434
Query: 181 SANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARL 240
A ++MEK G+ +L+TFNTLL Y G+F D E++W TM N N+ P++ SYNARL
Sbjct: 1435 KAILFFHDMEKNGMEPNLVTFNTLLTALYRKGQFFDGERVWATMENKNIAPDLVSYNARL 1494
Query: 241 DGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCG 297
G+ +EK+ + +EL+ +M KEI PDV+++ LIKGF +G+LEEAK+WY K S
Sbjct: 1495 RGMVLEKRIQDGIELLAKMEEKEIKPDVYSYNILIKGFCQDGDLEEAKKWYYKLKESEVD 1554
Query: 298 MNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
+++L+P +CE+GD D LCK + + A +Q VVD LA+ + EEAK+L
Sbjct: 1555 PIATTYRILLPLLCEQGDFDSGLQLCKEAIDKGFVFHTAEVQRVVDGLAEVSKTEEAKDL 1614
Query: 358 VEL 360
L
Sbjct: 1615 SRL 1617
Score = 307 bits (787), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 166/397 (41%), Positives = 239/397 (60%), Gaps = 35/397 (8%)
Query: 2 SFPSRLLSCSFSTTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYT 61
S PS C+ ST AT + E L++LV +F K+S+ +FR Y
Sbjct: 1667 SPPSATKKCNKSTAATP------------LTSEQGLQKLVKRFIKNSESEKFRRKNDTYF 1714
Query: 62 GTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGR 121
TV+ LA K+F IE+I+E QK+Y++I +EGF RLI LYGKA MF +ARK+FDE+P
Sbjct: 1715 STVRLLAIHKKFSMIEDIIEAQKKYEEIKEEGFAIRLIKLYGKAGMFSHARKLFDELPEL 1774
Query: 122 NCEQTVLSFNALLGACVNSKKF------------------DEVDGLFKDLPHKLGIEPDL 163
NCE+TV SFNALL +C NSK+F D+++ +F+++P ++ IE D+
Sbjct: 1775 NCERTVKSFNALLTSCANSKEFEQLETMFREVPCANSKEFDQLETIFREVPQEVSIEADV 1834
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
VSYN +I A+ G+LD A +MEK G +L+TFNTLL YS G+F D E +W
Sbjct: 1835 VSYNIVINAYCKMGALDKAILFFNDMEKNGTEPNLVTFNTLLTALYSKGQFLDGESMWAR 1894
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M N N+ P++ SYNARL + +EK+ + ++L+ EM K I P+V ++Y LI+GF +G+
Sbjct: 1895 MENKNIAPDLISYNARLQRMVLEKRIQDGIQLLAEMEEKAIKPNVDSYYILIEGFCEDGD 1954
Query: 284 LEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL 340
LE+AK+WY K + N +I++ L+P CEKGD D LCK +F + +Q
Sbjct: 1955 LEQAKQWYYKLKDNEVNPNASIYRTLLPLYCEKGDFDSGLRLCKESFDNGLVFLAEEVQR 2014
Query: 341 VVDRLAKELRVEEAKELVELGKTNSYCRYNLKFPSEE 377
VVD L + ++EEAK+LV L NS+ + LK P +E
Sbjct: 2015 VVDGLIEVSKIEEAKDLVAL--YNSHSIFKLKIPQKE 2049
Score = 304 bits (779), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 159/361 (44%), Positives = 223/361 (61%), Gaps = 5/361 (1%)
Query: 11 SFSTTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANA 70
S S+ AT K + EN L++LV +F +S+ +FR Y TV+ LA
Sbjct: 887 SLSSLATKKSKK--SPTATPLTDENRLQKLVQRFIINSESKQFRRKNDTYDSTVRFLAVR 944
Query: 71 KRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSF 130
K+F IEEI+E QK+Y +I +EGF RLI LYGKA MF ARK+FDE+P CE+TV SF
Sbjct: 945 KKFSMIEEIIEAQKKYDEIKEEGFVIRLIRLYGKAGMFSQARKLFDELPELKCERTVRSF 1004
Query: 131 NALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEME 190
NALL +CV SK+FD+V+ +F+++P +L IE D+ SYN +I A+ + D A ME
Sbjct: 1005 NALLVSCVKSKEFDQVEKIFREVPQELSIEADVSSYNIVINAYCEMDDFDKAILFFNHME 1064
Query: 191 KKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTK 250
K G+ DL+TFNTLL Y G+F D E +W M N N+ P++ SYNARL G+ ++K+ +
Sbjct: 1065 KNGMEPDLVTFNTLLTALYRKGQFLDGESMWARMENKNIAPDLVSYNARLRGMVLDKRIQ 1124
Query: 251 KALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLV 307
+EL+ +M KEI PDV + LI F +G+LEEAK+WY K S N ++ L+
Sbjct: 1125 DGIELLAKMEEKEIKPDVHIYNTLITSFCKDGDLEEAKKWYYKLKESEVDPNATTYRTLL 1184
Query: 308 PFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKTNSYC 367
P +CEKGD D LCK ++R + A +Q VVD LA+ + EEAK+L++ ++S
Sbjct: 1185 PLLCEKGDFDSGLQLCKEAINKRFVFHTAEVQRVVDGLAEVSKTEEAKDLLKKMFSSSLS 1244
Query: 368 R 368
R
Sbjct: 1245 R 1245
>gi|449479638|ref|XP_004155660.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
mitochondrial-like [Cucumis sativus]
Length = 398
Score = 318 bits (815), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 163/367 (44%), Positives = 227/367 (61%), Gaps = 5/367 (1%)
Query: 11 SFSTTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANA 70
S S+ AT K + EN L++LV +F +S+ +FR Y TV+ LA
Sbjct: 30 SLSSLATKKSKK--SPTATPLTDENRLQKLVQRFIINSESKQFRRKNDTYDSTVRFLAVR 87
Query: 71 KRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSF 130
K+F IEEI+E QK+Y +I +EGF RLI LYGKA MF ARK+FDE+P CE+TV SF
Sbjct: 88 KKFSMIEEIIEAQKKYDEIKEEGFVIRLIRLYGKAGMFSQARKLFDELPELKCERTVRSF 147
Query: 131 NALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEME 190
NALL +CV SK+FD+V+ +F+++P +L IE D+ SYN +I A+ + D A ME
Sbjct: 148 NALLVSCVKSKEFDQVEKIFREVPQELSIEADVSSYNIVINAYCEMDDFDKAILFFNHME 207
Query: 191 KKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTK 250
K G+ DL+TFNTLL Y G+F D E +W M N N+ P++ SYNARL G+ ++K+ +
Sbjct: 208 KNGMEPDLVTFNTLLTALYRKGQFLDGESMWARMENKNIAPDLVSYNARLRGMVLDKRIQ 267
Query: 251 KALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLV 307
+EL+ +M KEI PDV + LI F +G+LEEAK+WY K S N ++ L+
Sbjct: 268 DGIELLAKMEEKEIKPDVHIYNTLITSFCKDGDLEEAKKWYYKLKESEVDPNATTYRTLL 327
Query: 308 PFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKTNSYC 367
P +CEKGD D LCK ++R + A +Q VVD LA+ + EEAK+LVEL + +
Sbjct: 328 PLLCEKGDFDSGLQLCKEAINKRFVFHTAEVQRVVDGLAEVSKTEEAKDLVELYNSKNNL 387
Query: 368 RYNLKFP 374
++ LK P
Sbjct: 388 KFKLKLP 394
>gi|449479644|ref|XP_004155662.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
mitochondrial-like [Cucumis sativus]
Length = 411
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 165/394 (41%), Positives = 237/394 (60%), Gaps = 36/394 (9%)
Query: 2 SFPSRLLSCSFSTTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYT 61
S PS C+ ST AT + E L++LV +F K+S+ +FR Y
Sbjct: 30 SPPSATKKCNKSTAATP------------LTSEQGLQKLVKRFIKNSESEKFRRKNDTYF 77
Query: 62 GTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGR 121
TV+ LA K+F IE+I+E QK+Y++I +EGF RLI LYGKA MF +ARK+FDE+P
Sbjct: 78 STVRLLAIHKKFSMIEDIIEAQKKYEEIKEEGFAIRLIKLYGKAGMFSHARKLFDELPEL 137
Query: 122 NCEQTVLSFNALLGA------------------CVNSKKFDEVDGLFKDLPHKLGIEPDL 163
NCE+TV SFNALL + C NSK+FD+++ +F+++P ++ IE D+
Sbjct: 138 NCERTVKSFNALLTSCANSKEFEQLETMFREIPCANSKEFDQLETIFREVPQEVSIEADV 197
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
VSYN +I A+ G+LD A +MEK G +L+TFNTLL YS G+F D E +W
Sbjct: 198 VSYNIVINAYCKMGALDKAILFFNDMEKNGTEPNLVTFNTLLTALYSKGQFLDGESMWAR 257
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M N N+ P++ SYNARL + +EK+ + ++L+ EM K I P+V ++Y LI+GF +G+
Sbjct: 258 MENKNIAPDLISYNARLQRMVLEKRIQDGIQLLAEME-KAIKPNVDSYYILIEGFCEDGD 316
Query: 284 LEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL 340
LE+AK+WY K + N +I++ L+P CEKGD D LCK +F + +Q
Sbjct: 317 LEQAKQWYYKLKDNEVNPNASIYRTLLPLYCEKGDFDSGLQLCKESFDNGLVFLAEEVQR 376
Query: 341 VVDRLAKELRVEEAKELVELGKTNSYCRYNLKFP 374
VVD L + ++EEAK+LV L NS+ + LK P
Sbjct: 377 VVDGLIEVSKIEEAKDLVAL--YNSHSIFKLKIP 408
>gi|297834130|ref|XP_002884947.1| hypothetical protein ARALYDRAFT_897532 [Arabidopsis lyrata subsp.
lyrata]
gi|297330787|gb|EFH61206.1| hypothetical protein ARALYDRAFT_897532 [Arabidopsis lyrata subsp.
lyrata]
Length = 528
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 155/370 (41%), Positives = 227/370 (61%), Gaps = 5/370 (1%)
Query: 3 FPSRLLSCSFSTTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTG 62
FPS+L + + S+ + G K + L + V+KFK+S + FR G+Y+
Sbjct: 38 FPSKLKASTASSASVGDGGNLSNDAKES--KNSKLTKKVEKFKRSCESEGFRQVHGLYSA 95
Query: 63 TVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRN 122
++RL AK+F I E+L++QK++ DI E F R++ LYG + M E+A K+FDEMP N
Sbjct: 96 FIRRLREAKKFSTIHEVLQYQKKFDDIKSEDFVIRIMLLYGYSGMAEHAHKLFDEMPELN 155
Query: 123 CEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSA 182
CE+TV SFNALL A VNS+K DE FK+LP KLGI PDLV+YNT+IKA GS+D
Sbjct: 156 CERTVKSFNALLSAYVNSRKLDEAKKAFKELPEKLGITPDLVTYNTMIKALCRTGSMDDI 215
Query: 183 NTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDG 242
++ E+EK G DLI+FNTLL FY F + ++IW+ M + N+ PN+RSYN+R+ G
Sbjct: 216 LSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLAPNIRSYNSRVRG 275
Query: 243 LAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMN 299
L K+ A++L+ M+++ I+PDV T+ A I + + NLEE +WYN + G +
Sbjct: 276 LTRNKKFTDAIDLINVMKTEGISPDVHTYNAFITAYRGDNNLEEVMKWYNEMKEKGLTPD 335
Query: 300 KAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ LL+P +C+KGDLD A + + + L + VV+RL +++EA +LV+
Sbjct: 336 TVTYCLLIPLLCKKGDLDRAVEISEEAIKHKLLSRPNMYKPVVERLMGAGKIDEATQLVK 395
Query: 360 LGKTNSYCRY 369
GK SY RY
Sbjct: 396 NGKLQSYFRY 405
>gi|15231160|ref|NP_187922.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75311241|sp|Q9LK58.1|PP225_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g13150
gi|10172602|dbj|BAB01406.1| unnamed protein product [Arabidopsis thaliana]
gi|66792658|gb|AAY56431.1| At3g13150 [Arabidopsis thaliana]
gi|332641781|gb|AEE75302.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 551
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 158/370 (42%), Positives = 228/370 (61%), Gaps = 8/370 (2%)
Query: 3 FPSRLLSCSFSTTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTG 62
FPS+L + ST + G + K + L + V+KFK+S + FR G+Y+
Sbjct: 38 FPSKLKA---STASVGDGGQSSNDAKDS--KNSKLTQKVEKFKRSCESESFRQVHGLYSA 92
Query: 63 TVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRN 122
++RL AK+F I+E+L++QK++ DI E F R++ LYG + M E+A K+FDEMP N
Sbjct: 93 FIRRLREAKKFSTIDEVLQYQKKFDDIKSEDFVIRIMLLYGYSGMAEHAHKLFDEMPELN 152
Query: 123 CEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSA 182
CE+TV SFNALL A VNSKK DE FK+LP KLGI PDLV+YNT+IKA KGS+D
Sbjct: 153 CERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDI 212
Query: 183 NTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDG 242
++ E+EK G DLI+FNTLL FY F + ++IW+ M + N+ PN+RSYN+R+ G
Sbjct: 213 LSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRG 272
Query: 243 LAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMN 299
L K+ AL L+ M+++ I+PDV T+ ALI + + NLEE + YN + G +
Sbjct: 273 LTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPD 332
Query: 300 KAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ +L+P +C+KGDLD A + + + L + VV+RL +++EA +LV+
Sbjct: 333 TVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEATQLVK 392
Query: 360 LGKTNSYCRY 369
GK SY RY
Sbjct: 393 NGKLQSYFRY 402
>gi|413952228|gb|AFW84877.1| hypothetical protein ZEAMMB73_259977 [Zea mays]
Length = 453
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 137/353 (38%), Positives = 205/353 (58%), Gaps = 7/353 (1%)
Query: 27 VIRGIYKENNLKRLVDKF-KKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
+++ I++E + +LV +F +S+ RFR +Y V RLA+ R I I++ QK
Sbjct: 56 ILQVIFRERDPDKLVSQFIAESTASERFRNKHRVYDVAVARLASFGRHDGIAAIIDSQKP 115
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
+ S GF ARLI L G+A+M +A +F ++P ++ ++ ++FNALL A +++ FD
Sbjct: 116 FIAASSVGFAARLIRLCGRASMPSHAAAIFHDLPPKH--KSSMTFNALLAAYLDASDFDA 173
Query: 146 VDGLFKDLPH-KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
+ +++P I P + S+N +I A K L +A ++ MEK+GI D+I+FN L
Sbjct: 174 LATALQEIPATHPTIAPTIYSHNILISALCKKPDLSAAVDVITLMEKRGITPDIISFNIL 233
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
L GFYSN RF D EK+WE M NV P+ RSYNA+L GL + + + A L+ M+ +
Sbjct: 234 LNGFYSNDRFDDVEKVWEMMKERNVEPDARSYNAKLRGLVSQGRVEDAAALIERMQKEGP 293
Query: 265 NPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFN 321
PD ++ LI+G+ NEG L EAK+ Y+ K+G N+ F LVP E G+LD A +
Sbjct: 294 KPDSVSYNELIRGYCNEGRLNEAKKVYDNMIKNGYAPNRGTFHTLVPHFVEAGELDHALS 353
Query: 322 LCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKTNSYCRYNLKFP 374
C F+ +C V + LQ VV L RVEEAK +V LG+ N Y R L+ P
Sbjct: 354 CCHEIFTRKCRVQCSLLQGVVTALFAASRVEEAKRIVHLGRENYYPRKGLRMP 406
>gi|357131120|ref|XP_003567190.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
mitochondrial-like [Brachypodium distachyon]
Length = 463
Score = 240 bits (613), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 141/365 (38%), Positives = 211/365 (57%), Gaps = 12/365 (3%)
Query: 22 KFIGSVIRGIYKENNLKRLVDKF-KKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEIL 80
K +G +I+G+ +E + ++LV F SS RFR +Y V RLA+ R IE IL
Sbjct: 74 KPLGYIIKGLLRERDPEKLVSDFVAASSASARFRDRHRVYEMAVSRLASLGRQDSIETIL 133
Query: 81 EHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNS 140
QK++ + SKEGF RLI LYG+AAM A F E+P + + ++ NA+L A +
Sbjct: 134 GAQKRFLETSKEGFATRLIGLYGRAAMPAQASATFHELPAQL--KCTMTLNAVLTAYYQA 191
Query: 141 KKFDEVDGLFKDLP--HKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL 198
K+FD + F+++ H L + P + SYN +I+A K L +A ++ MEK G+ D
Sbjct: 192 KEFDALATAFQEISVSHPLVV-PSVYSYNILIRALCQKHDLSAALNVITLMEKCGVLPDN 250
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
I+FNTLL GFY NGR DAE +WE M N+ P+ +SYNA+L GL E + + A+ +V
Sbjct: 251 ISFNTLLNGFYQNGRMDDAEAVWEMMKGWNLEPDTKSYNAKLRGLVAEGRIEDAVAVVER 310
Query: 259 MRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGD 315
M + PD ++ LI+G+ + G LE+AK+ Y+ K+ C N+ ++ L+P + + G+
Sbjct: 311 MEKEGPKPDTVSYNELIRGYCSAGRLEDAKKLYDGLVKNECAPNRGTYETLLPRLLQAGE 370
Query: 316 LDFAFNLCKRTFS---ERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKTNSYCRYNLK 372
LD A C S + C VD++ LQ VV L + RV+EA ++VELG+ Y R L
Sbjct: 371 LDCAVRYCHGLLSPNTKNCRVDRSLLQDVVTTLVEASRVDEAAKIVELGRKKYYLRKLLM 430
Query: 373 FPSEE 377
+EE
Sbjct: 431 PHTEE 435
>gi|357131125|ref|XP_003567192.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
mitochondrial-like, partial [Brachypodium distachyon]
Length = 457
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 142/362 (39%), Positives = 211/362 (58%), Gaps = 12/362 (3%)
Query: 22 KFIGSVIRGIYKENNLKRLVDKF-KKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEIL 80
K +G +I+G+ +E + ++LV F SS RFR +Y V RLA+ R IE +L
Sbjct: 67 KPLGYIIKGLLRERDPEKLVSDFVAASSASARFRDRHRVYEVAVSRLASFGRQDSIETLL 126
Query: 81 EHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNS 140
QK++ + SKEGF RLI LYG+AAM A F E+P + + ++FNA+L A +
Sbjct: 127 GAQKRFLETSKEGFATRLIGLYGRAAMPAQAAATFHELPAQ--LKCTMTFNAVLTAYSRA 184
Query: 141 KKFDEVDGLFKDLP--HKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL 198
K+FD + F+++P H L + P + SYN +I A K +L +A ++ MEK G+ D
Sbjct: 185 KEFDALATAFQEIPASHPL-VVPSVYSYNILISALCQKPALSAALNVVTLMEKCGVLPDN 243
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
I+FNTLL GF NGR DAE +WE M N+ P+ +SYNA+L GL E + + A+ +V
Sbjct: 244 ISFNTLLNGFSKNGRVDDAEAVWEMMKERNLEPDTKSYNAKLRGLVAEGRIEDAVAVVER 303
Query: 259 MRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGD 315
M + PD ++ LI+G+ + G LE+AK+ Y+ K+ C NK ++ L+P + + G+
Sbjct: 304 MEKEGPKPDTVSYNELIRGYCSAGRLEDAKKLYDGLVKNECAPNKGTYETLLPRLLQAGE 363
Query: 316 LDFAFNLCKRTFS---ERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKTNSYCRYNLK 372
LD A C FS + C VD + LQ VV L + RV+EA ++VELG+ Y R L+
Sbjct: 364 LDCALRYCHELFSSNIKSCRVDCSLLQDVVTTLVEASRVDEAAKIVELGRKKYYPRKLLR 423
Query: 373 FP 374
P
Sbjct: 424 MP 425
>gi|242054629|ref|XP_002456460.1| hypothetical protein SORBIDRAFT_03g036710 [Sorghum bicolor]
gi|241928435|gb|EES01580.1| hypothetical protein SORBIDRAFT_03g036710 [Sorghum bicolor]
Length = 439
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 124/322 (38%), Positives = 187/322 (58%), Gaps = 6/322 (1%)
Query: 59 IYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEM 118
+Y V RLA+ R I I++ QK + + S GF ARL+ L G A+M +A +F +
Sbjct: 75 VYEVAVARLASFGRHDAIAAIIDSQKPFIEASSVGFAARLVRLCGGASMPSHAAAIFHGL 134
Query: 119 PGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLP-HKLGIEPDLVSYNTIIKAFVDKG 177
P ++ ++V++FNALL A V++ FD + F+ +P I P + SYN +I A K
Sbjct: 135 PPKH--KSVMTFNALLAAYVDASDFDALTTTFQQIPASHPTIIPTVYSYNILISALCQKP 192
Query: 178 SLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYN 237
L +A ++ MEK+G+ D+I+FN LL GFY+N F DAEK+WE M N+ P+ +SYN
Sbjct: 193 ELSAALDVIALMEKRGVSPDIISFNILLNGFYNNDSFDDAEKVWEMMKERNIEPDEKSYN 252
Query: 238 ARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KS 294
A+L GL + + + A+ L+ M+ + PD ++ LI+G+ EG L EAK+ Y+ K+
Sbjct: 253 AKLRGLVSQGRVEDAVALIERMQKEGPKPDSVSYNELIRGYCKEGRLNEAKKVYDDLIKN 312
Query: 295 GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA 354
C N+ F LVP + E G+LD A + C FS +C V + LQ VV L R+ EA
Sbjct: 313 ECAPNRGTFHTLVPHLVEAGELDRALSCCHEIFSRKCRVHCSLLQGVVTALIAASRMGEA 372
Query: 355 KELVELGKTNSYCRYNLKFPSE 376
K +V LG+ N Y + +L+ P
Sbjct: 373 KRIVHLGRKNYYPQKHLRMPPH 394
>gi|242041671|ref|XP_002468230.1| hypothetical protein SORBIDRAFT_01g042160 [Sorghum bicolor]
gi|241922084|gb|EER95228.1| hypothetical protein SORBIDRAFT_01g042160 [Sorghum bicolor]
Length = 396
Score = 228 bits (581), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 128/352 (36%), Positives = 197/352 (55%), Gaps = 7/352 (1%)
Query: 28 IRGIYKENNLKRLVDKF-KKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
+ I++E N +LV +F KS+ FR +Y V RLA+ R I I++ QK +
Sbjct: 4 VTAIFRERNPDKLVSRFIAKSTASESFRNEHRVYEVAVARLASFGRHDAIAAIIDSQKPF 63
Query: 87 KDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEV 146
S GF ARLI L G+A+M +A +F ++P ++ +++++FNALL V++ FD +
Sbjct: 64 IKASSVGFAARLIRLCGRASMPSHAAAIFHDLPPKH--KSIMTFNALLATYVDASDFDAL 121
Query: 147 DGLFKD-LPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
F+ L I P + SY+ +I A K L +A ++ MEK+G+ D I FN +L
Sbjct: 122 AIAFQQILASHPTIVPTVYSYSILISALCQKRELSAALDVITLMEKRGVSPDNIFFNIVL 181
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEIN 265
GFY N F DAEK+WE M N+ P+ + YNA+L GL + + + A+ L+ M+ +
Sbjct: 182 NGFYRNDSFDDAEKVWEIMKERNIEPDAKCYNAKLRGLISQGRVEDAVALIERMQKEGPK 241
Query: 266 PDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
PD ++ LI+G+ EG L +AK+ Y+ K+ C N+ F LVP E +LD A +
Sbjct: 242 PDSVSYNELIRGYCKEGRLNQAKKVYDDLIKNECAPNRGTFHTLVPHFVEARELDCALSC 301
Query: 323 CKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKTNSYCRYNLKFP 374
C F +C V + LQ VV L R+EEA+ +V+LG+T+ Y R L+ P
Sbjct: 302 CHEIFRRKCRVQCSLLQGVVTALIAASRMEEARRIVQLGRTSYYPRKGLRIP 353
>gi|115440379|ref|NP_001044469.1| Os01g0785700 [Oryza sativa Japonica Group]
gi|20804913|dbj|BAB92593.1| drought-inducible protein 1OS [Oryza sativa Japonica Group]
gi|37179506|gb|AAN05726.2| drought-inducible protein 1OS [Oryza sativa Indica Group]
gi|113534000|dbj|BAF06383.1| Os01g0785700 [Oryza sativa Japonica Group]
gi|125527974|gb|EAY76088.1| hypothetical protein OsI_04014 [Oryza sativa Indica Group]
gi|125572269|gb|EAZ13784.1| hypothetical protein OsJ_03709 [Oryza sativa Japonica Group]
gi|215704731|dbj|BAG94759.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215717015|dbj|BAG95378.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 434
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 130/356 (36%), Positives = 202/356 (56%), Gaps = 7/356 (1%)
Query: 24 IGSVIRGIYKENNLKRLVDKF-KKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEH 82
I +I+G+ +E + +LV F SS RFR +Y V RLA R +E I++
Sbjct: 60 IDDIIKGLLRERDPDKLVSGFIAASSTHPRFRARHRVYDVAVSRLATFGRLDGVEAIIDA 119
Query: 83 QKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKK 142
QK + + SKEGF ARLI LYG A+M +A F ++P + ++ ++FN+LL A V + +
Sbjct: 120 QKPFLETSKEGFAARLIRLYGHASMASHAAATFHDLPPQ--LKSTMTFNSLLAAYVEAGE 177
Query: 143 FDEVDGLFKDLP-HKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITF 201
F+ + FK++P + P + SYN +++A L +A + MEK GI DL+TF
Sbjct: 178 FEALAAAFKEIPVSNPSVVPSVYSYNILLQALCKVPDLSAALDTMTLMEKSGISPDLVTF 237
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS 261
NTLL GFY++G AEK+WE + N+ P+ ++YNA+L GL + + + A+ +V +M
Sbjct: 238 NTLLNGFYNHGDMDGAEKVWEMITERNMVPDAKNYNAKLRGLVAQGRIEDAVAVVEKMEK 297
Query: 262 KEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDF 318
PD ++ LI+G+ +G LEEAK+ + ++G N+ + L+P + + G+LD+
Sbjct: 298 DGPKPDTISYNELIRGYCKDGRLEEAKKLFEDMAENGYVANRGTYHTLIPCLVKAGELDY 357
Query: 319 AFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKTNSYCRYNLKFP 374
A C + + VD LQ VV L RVE+A ++VELG NSY R L P
Sbjct: 358 ALKCCHEIYGKNLRVDCFVLQEVVTALVTASRVEDATKIVELGWNNSYPRRILNIP 413
>gi|242054627|ref|XP_002456459.1| hypothetical protein SORBIDRAFT_03g036700 [Sorghum bicolor]
gi|241928434|gb|EES01579.1| hypothetical protein SORBIDRAFT_03g036700 [Sorghum bicolor]
Length = 429
Score = 224 bits (570), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 130/356 (36%), Positives = 202/356 (56%), Gaps = 24/356 (6%)
Query: 24 IGSVIRGIYKENNLKRLVDKFKKSSDLG-RFRTNTGIYTGTVQRLANAKRFRWIEEILEH 82
+G ++R I +E + +LV +F +S RFR N +Y V RLA+ R + +L+
Sbjct: 61 LGKIMRVISEERDPDKLVSQFIAASTASPRFRDNRRVYEVAVSRLASFGRRDAVAALLDS 120
Query: 83 QKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKK 142
QK + + S E FT R++ LYG+A+M +A F +P ++ ++V +FNALL A V++
Sbjct: 121 QKPFLEASNEDFTVRILRLYGRASMPSHAAATFVGLPPKH--KSVAAFNALLAAYVDTGD 178
Query: 143 FDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFN 202
FD + ++P EP A +D SL M+K G+ D+++FN
Sbjct: 179 FDSLAIALDEIPGSQKAEP---------SAALDVISL---------MDKCGLTPDMVSFN 220
Query: 203 TLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
+LL GFY+NGRF AEKIWE M N++PN ++YNA+L GL E + + A ++ M +
Sbjct: 221 SLLNGFYNNGRFDKAEKIWEMMKERNLQPNAKTYNAKLRGLVAEGRMEDAAAVIQRMLKE 280
Query: 263 EINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFA 319
PD ++ LI+G+ EG L+E+K+ Y+ K+G NK F+ L+P + E G+LD A
Sbjct: 281 GPKPDSVSYNELIRGYCKEGRLDESKKVYDELVKNGYAPNKGTFETLIPCLVEVGELDLA 340
Query: 320 FNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKTNSYCRYNLKFPS 375
N C+ F+ +C V + LQ VV L RVEEA+ +V+LG N+Y +L P+
Sbjct: 341 LNCCQEIFNRKCRVKCSLLQAVVTALVAASRVEEARRIVKLGWKNNYPPRHLNIPA 396
>gi|359482337|ref|XP_002267057.2| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
mitochondrial-like [Vitis vinifera]
Length = 405
Score = 197 bits (501), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 111/332 (33%), Positives = 176/332 (53%), Gaps = 3/332 (0%)
Query: 34 ENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEG 93
E + +RL FK ++ N + TV RLA A RF +IE +LEHQK +EG
Sbjct: 52 ERDPERLFQLFKANAHNRLVVENRFAFEDTVSRLAGAGRFDYIEHLLEHQKTLPQGRREG 111
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
F R+I LYGKA M + A F +M C++TV SFNA L S + +D +D+
Sbjct: 112 FIVRIIMLYGKAGMIKQAVDTFYDMHLFGCQRTVKSFNAALKVLTQSYDLEAIDLFLRDV 171
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
P K GIE D+ S N +IKA D L+ A ++ EMEK G+ D++T+ TL+ FY + R
Sbjct: 172 PFKFGIELDVFSVNIVIKALCDMDILEKAYMVMIEMEKAGVNPDVVTYTTLISAFYKSNR 231
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
+ +W MV PN+ ++N R+ L ++ +A L+G M I PD T+
Sbjct: 232 WEVGNGLWNLMVMKGCLPNLATFNVRIQYLVNRRRAWQANSLMGMMEYLGITPDEVTYNL 291
Query: 274 LIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSER 330
+IKGF G LE AK+ Y+ G N I++ ++ ++C+ G+ D A+ +CK +
Sbjct: 292 VIKGFCQAGYLEMAKKVYSALHGKGYKPNVKIYQTMIHYLCKGGEFDMAYTMCKDCMNRN 351
Query: 331 CLVDQAPLQLVVDRLAKELRVEEAKELVELGK 362
++ + +++ L +++AK ++ L +
Sbjct: 352 WSLNVDTIYKLLEGLKGNGEIDKAKVILRLAR 383
>gi|255553141|ref|XP_002517613.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543245|gb|EEF44777.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 400
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 110/332 (33%), Positives = 181/332 (54%), Gaps = 3/332 (0%)
Query: 34 ENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEG 93
E + ++L + FK ++ N + T+ RLA A+RF +IE +LEHQK +EG
Sbjct: 48 ERDPEKLFNLFKANARNRLVIENRFAFEDTISRLAGARRFDYIEHLLEHQKTLPQGRREG 107
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
F R+I LYGKA M ++A F++M C++TV SFNA L + + + ++
Sbjct: 108 FIIRIIMLYGKAGMTKHAVDTFNDMHMYGCKRTVKSFNAALKVLTETCDLEAIKAFLSEV 167
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
P K I D+ S N IIKAF LD A ++ +ME+ GIR D++T+ TL+ FY N R
Sbjct: 168 PEKFDIILDIFSVNIIIKAFCKMSILDKAYLVMIQMERLGIRPDVVTYTTLISAFYKNDR 227
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
+ + +W MV PN+ ++N R+ L +Q+ +A E++ M I+PD T+
Sbjct: 228 WEISNGLWNLMVLKGCLPNLSTFNVRIQHLVNIRQSWQANEVMLLMERIGISPDEVTYNL 287
Query: 274 LIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSER 330
+IKGF G LE A+R Y+ G N I++ ++ +C+ G+ D A+ +CK +
Sbjct: 288 VIKGFGQAGYLEMARRVYSALHGKGYKPNVKIYQTMIHCLCKGGEFDLAYTMCKDCMKKS 347
Query: 331 CLVDQAPLQLVVDRLAKELRVEEAKELVELGK 362
++ + ++D L K ++++AK +V L +
Sbjct: 348 WFLNVDTIHTLLDGLKKNGQLDKAKMIVTLAQ 379
>gi|357148282|ref|XP_003574702.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
mitochondrial-like [Brachypodium distachyon]
Length = 448
Score = 194 bits (492), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 118/341 (34%), Positives = 180/341 (52%), Gaps = 5/341 (1%)
Query: 31 IYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDIS 90
I E + KRL + F+ ++ N + V RL+ A+R +EEILE K
Sbjct: 89 IKHERDPKRLYELFRANAHNRLLVENRFAFQDAVARLSGARRNDLVEEILEQHKALPQGR 148
Query: 91 KEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLF 150
+EGF R+I LYGKA M E+A + F EM C T SFNA L + ++ FDE LF
Sbjct: 149 REGFVVRIIGLYGKARMPEHALRTFQEMEMYGCTCTNKSFNATLKVLMQAQLFDEALQLF 208
Query: 151 KDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYS 210
++ P K G+E D +SYNT++K D G L +A ++ EMEK+GI+ D+IT+ TL+ FY
Sbjct: 209 EEGPGKYGVELDDISYNTVVKMMCDMGELRAAYRVMQEMEKEGIQPDVITYTTLMAAFYK 268
Query: 211 NGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
NG+ + +W M P + SYN R+ L ++ +A +LV +M + I PD T
Sbjct: 269 NGQREVGDGLWNLMRLRGCMPTLASYNVRIQFLINRRRGWQANDLVRKMYAAGIRPDEIT 328
Query: 271 FYALIKGFVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTF 327
+ +IKGF E AK + + GC N I++ +V ++CE+ + D AF LCK +
Sbjct: 329 YNLVIKGFFMMREHEMAKTVFGAMHGRGCKPNGKIYQTMVHYLCERREFDLAFRLCKDSM 388
Query: 328 SERCLVDQAPLQLVVDRLAKELRVEEAKELVEL--GKTNSY 366
+ ++ L + A E+++L G+ +SY
Sbjct: 389 ENNWFPSVDTIHHLLKGLMSISKDRNAGEIMKLVMGRKSSY 429
>gi|156070779|gb|ABU45192.1| unknown [Petunia integrifolia subsp. inflata]
Length = 406
Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 105/297 (35%), Positives = 171/297 (57%), Gaps = 6/297 (2%)
Query: 63 TVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRN 122
TV+RLA + RF IE LE K I++E F + +I YG A MF++A K++D+M
Sbjct: 71 TVKRLAKSHRFSDIESFLESHKNSSKITQEPFLSSIIRSYGIAGMFDHALKIYDQMDDLG 130
Query: 123 CEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSA 182
++ +SFN LL ACVN+K++D V LF ++P K G PD VSY +I+++ + G + A
Sbjct: 131 TPRSAISFNVLLSACVNTKQYDRVRQLFDEMPVKYGFLPDKVSYGILIRSYCEMGLPEKA 190
Query: 183 NTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDG 242
L EME+KG+ + ITF TLL FY G +AEK+W MVN P+V +YN ++
Sbjct: 191 MERLKEMEEKGVEITAITFTTLLHAFYKKGMGDEAEKVWNEMVNKGCGPDVGAYNVKIRN 250
Query: 243 L-AIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGM 298
+ + + KA L+ EM + + PD ++ L+ + G ++EA++ Y +GC
Sbjct: 251 IQGGDPEGVKA--LIEEMNNAGLKPDTISYNYLMTCYCENGLMDEAQKVYEDLETNGCNP 308
Query: 299 NKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAK 355
N A F+ L+ ++C+KG + + + K + + D L+ +V+ L K ++++AK
Sbjct: 309 NAATFRSLILYLCKKGRFETGYKVFKESVRVNKMPDFNTLKCLVEGLVKREKLKDAK 365
>gi|224070831|ref|XP_002303255.1| predicted protein [Populus trichocarpa]
gi|222840687|gb|EEE78234.1| predicted protein [Populus trichocarpa]
Length = 401
Score = 190 bits (483), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 109/332 (32%), Positives = 173/332 (52%), Gaps = 3/332 (0%)
Query: 34 ENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEG 93
E + ++L + FK +++ N + TV RLA A RF +IE +LEHQK +EG
Sbjct: 49 ERDPEKLFNLFKANAENRLVVENRFAFEDTVSRLAGANRFDYIEHLLEHQKPLPQGRREG 108
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
F R+I LYGKA M ++A F M C++TV S NA L ++ ++ +
Sbjct: 109 FMVRIIMLYGKAGMIKHAIDTFYNMHLHGCKRTVKSVNAALKVLTGTRDLAAIEAFVNEA 168
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
P K IE D+ S N I+KA + G+LD A L+ EMEK G+R D+IT+ TL+ FY N R
Sbjct: 169 PKKFDIELDIFSVNIIVKALCETGNLDKAYLLMVEMEKSGVRPDVITYTTLMSAFYKNNR 228
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
+W MV PN+ ++N R+ L ++ A +++ M I PD T+
Sbjct: 229 SEIGNGLWNLMVLKGCLPNLATFNVRIQYLVNIRRAWHANDVMRLMLKIGIVPDEVTYNL 288
Query: 274 LIKGFVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSER 330
+IKGF G LE AK Y G N +++ +V ++C+ G+ D A+ +C+
Sbjct: 289 VIKGFFQTGKLEMAKMVYFSLRGKGHKFNVKVYQTMVHYLCKGGEFDLAYTMCRDCMRNN 348
Query: 331 CLVDQAPLQLVVDRLAKELRVEEAKELVELGK 362
++ + +++ L K ++ +AK +V L +
Sbjct: 349 WFLNVDTIHTLLEGLKKNGQLNKAKVIVTLAQ 380
>gi|147840633|emb|CAN68320.1| hypothetical protein VITISV_032192 [Vitis vinifera]
Length = 416
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 101/305 (33%), Positives = 173/305 (56%), Gaps = 5/305 (1%)
Query: 63 TVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRN 122
TV+RLA ++RF IE ++E K I++E + + LI YG A MF++A + F++M
Sbjct: 79 TVKRLAKSRRFADIETLIESHKNDPKITQEPYLSTLIRSYGIAGMFQHALRTFNQMEELG 138
Query: 123 CEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSA 182
++ +SFNALL AC SK FD+V F+++P + GI PD +SY ++K++ + G D A
Sbjct: 139 TPRSSISFNALLSACNQSKLFDQVPKFFEEIPRRYGIXPDKISYGILVKSYCESGLSDKA 198
Query: 183 NTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDG 242
++L EME+KG+ + +TF T+L Y G+ AEK+W M +V +YN ++
Sbjct: 199 ISMLKEMEEKGVEITAVTFTTILDALYKQGQSDRAEKVWHEMAKKGCL-DVGAYNVKI-M 256
Query: 243 LAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMN 299
A + L+ EM + + PD ++ L+ + G ++EAK+ Y ++GC N
Sbjct: 257 FAHGGDPENVKALIDEMSNAGLKPDTISYNYLMTSYCKSGMMDEAKKVYAELEETGCHPN 316
Query: 300 KAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
A F+ L+ ++C GD + + + K++ R + D L+ +V+ L ++ + +EAK L+
Sbjct: 317 AATFRTLIYYLCRSGDFETGYKVFKQSAFRRKIPDFGTLRHLVEGLVQKKKTKEAKGLIR 376
Query: 360 LGKTN 364
K N
Sbjct: 377 TVKKN 381
>gi|224054128|ref|XP_002298105.1| predicted protein [Populus trichocarpa]
gi|222845363|gb|EEE82910.1| predicted protein [Populus trichocarpa]
Length = 401
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 109/347 (31%), Positives = 179/347 (51%), Gaps = 8/347 (2%)
Query: 34 ENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEG 93
E + ++L + FK +++ N + TV RLA A RF +IE +LEHQK +EG
Sbjct: 49 ERDPEKLFNLFKANAENKLVVENRFAFEDTVSRLAGANRFDYIEHLLEHQKTLPQGRREG 108
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
+ R+I LYGKA M E+A F M R C++TV SFNA L ++ ++ +
Sbjct: 109 YMVRIIMLYGKAGMIEHAIDTFHNMHLRGCKRTVKSFNAALKVLTGTRDLATIETFVNEA 168
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
P K IE D+ S N I+KA ++G LD + L+ EMEK G+ D+IT+ TL +Y N +
Sbjct: 169 PKKFDIEFDIFSVNIIVKALCERGVLDKSYLLMVEMEKSGVTPDVITYTTLTSAYYKNNK 228
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
+W MV PN+ ++N R+ L ++ A +++ M+ I PD ++
Sbjct: 229 AEIGNGLWNLMVLKGCLPNLATFNVRIQYLVNIRRAWHANDVMRLMQKIGIVPDEVSYNL 288
Query: 274 LIKGFVNEGNLEEAKRWYNKSGC---GMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSER 330
++KGF GNLE AK Y C N +++ +V ++C+ G+ D A+ +C+
Sbjct: 289 VLKGFFQVGNLEMAKLVYFSLRCKGHKFNVKVYQTMVHYLCKGGEFDLAYTMCRDCMRTN 348
Query: 331 CLVDQAPLQLVVDRLAKELRVEEAKELVELGKTNSYCRYNLKFPSEE 377
++ + +++ L K ++ +AK ++ L + R FPS
Sbjct: 349 WFLNVDTIHTLLEGLKKNGQLNKAKVILTLAQ-----RRVPPFPSSH 390
>gi|225430810|ref|XP_002271426.1| PREDICTED: pentatricopeptide repeat-containing protein At4g36680,
mitochondrial-like [Vitis vinifera]
Length = 414
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 100/305 (32%), Positives = 173/305 (56%), Gaps = 5/305 (1%)
Query: 63 TVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRN 122
TV+RLA ++RF IE ++E K I++E + + LI YG A MF++A + F++M
Sbjct: 77 TVKRLAKSRRFADIETLIESHKNDPKITQEPYLSTLIRSYGIAGMFQHALRTFNQMEELG 136
Query: 123 CEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSA 182
++ +SFNALL AC SK FD+V F+++P + G+ PD +SY ++K++ + G D A
Sbjct: 137 TPRSSISFNALLSACNQSKLFDQVPKFFEEIPRRYGVLPDKISYGILVKSYCESGLSDKA 196
Query: 183 NTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDG 242
++L EME+KG+ + +TF T+L Y G+ AEK+W M +V +YN ++
Sbjct: 197 ISMLKEMEEKGVEITAVTFTTILDALYKQGQSDRAEKVWHEMAKKGCL-DVGAYNVKI-M 254
Query: 243 LAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMN 299
A + L+ EM + + PD ++ L+ + G ++EAK+ Y ++GC N
Sbjct: 255 FAHGGDPENVKALIDEMSNAGLKPDTISYNYLMTSYCKSGMVDEAKKVYAELEETGCHPN 314
Query: 300 KAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
A F+ L+ ++C GD + + + K++ R + D L+ +V+ L ++ + +EAK L+
Sbjct: 315 AATFRTLIYYLCRSGDFETGYKVFKQSAFRRKIPDFGTLRHLVEGLVQKKKTKEAKGLIR 374
Query: 360 LGKTN 364
K N
Sbjct: 375 TVKKN 379
>gi|156070795|gb|ABU45207.1| unknown [Solanum bulbocastanum]
Length = 405
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 102/297 (34%), Positives = 173/297 (58%), Gaps = 6/297 (2%)
Query: 63 TVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRN 122
TV+RLA + RF IE LE K I++E F + +I YG A MF++A K++ +M
Sbjct: 73 TVKRLAKSHRFSDIENFLESHKNSPKITQEPFLSSIIRSYGVAGMFDHALKIYHQMDDLG 132
Query: 123 CEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSA 182
++ +SFN LL ACV SK +D V LF ++P K G PD VSY +I+++ + GS + A
Sbjct: 133 TPRSAISFNVLLSACVRSKLYDRVPQLFDEIPVKYGFLPDKVSYGILIRSYCEMGSPEMA 192
Query: 183 NTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDG 242
L EME+KG+ + +TF T+L FY + +AEK+W MVN P+V +YN ++
Sbjct: 193 MERLKEMEEKGVEITSVTFTTILHSFYKKRKSDEAEKVWNEMVNRGCGPDVGAYNVKI-- 250
Query: 243 LAIEKQTKKALE-LVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGM 298
+ I+ + ++ L+ EM + PD ++ L+ + ++EA++ Y+ K+GC
Sbjct: 251 MNIQGGDPEGVKALIEEMNDAGLKPDTISYNYLMTCYCRNELIDEAQKVYDDLEKNGCNP 310
Query: 299 NKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAK 355
N A F+ L+ ++C+KG + + + K + + + D L+ +V+ LAK+ ++++AK
Sbjct: 311 NAATFRTLIFYLCKKGRFETGYKVFKESVKVQKIPDFDTLKYLVEGLAKKSKLKDAK 367
>gi|293334061|ref|NP_001169447.1| uncharacterized protein LOC100383318 [Zea mays]
gi|224029437|gb|ACN33794.1| unknown [Zea mays]
gi|414869277|tpg|DAA47834.1| TPA: hypothetical protein ZEAMMB73_389575 [Zea mays]
Length = 459
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 113/345 (32%), Positives = 174/345 (50%), Gaps = 5/345 (1%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
V+ I E + +RL F+ ++ N + V RLA A+R +EEILE K
Sbjct: 96 VLVRIKHERDPERLYQLFRANAHNRLLVENRFAFEDAVARLAGARRNDLVEEILEQHKAL 155
Query: 87 KDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEV 146
+EGF R+I LYGKA M +A + F EM C +T S NA + + ++ FDE
Sbjct: 156 PQGRREGFVVRIIGLYGKAGMPGHALRTFQEMGMYGCPRTAKSLNATMKVLLRARMFDEA 215
Query: 147 DGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLL 206
LF++ P K +E D +S NT++K F D G L +A ++ ME+ G+R D+IT+ TL+
Sbjct: 216 LSLFEEGPEKYDVEVDDISCNTVVKMFCDMGDLRAAYQVMQGMERAGVRPDVITYTTLMA 275
Query: 207 GFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINP 266
FY GR + +W M P + +YN R+ L + +A EL +M I P
Sbjct: 276 AFYKCGRREVGDGLWNLMRLRGCVPTLATYNVRIQFLVNRGRGWQANELARKMYVAGIKP 335
Query: 267 DVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLC 323
D T+ +IKGF G E AK + + GC N +++ +V ++CE+ D D AF LC
Sbjct: 336 DEITYNLIIKGFFMMGEHEMAKTVFGAMHGRGCKPNSKVYQTMVHYLCERRDFDLAFRLC 395
Query: 324 KRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVEL--GKTNSY 366
K + + + ++ L + KE+++L G+ SY
Sbjct: 396 KDSMEKNWFPSVDTINQLLKGLMAISKDRNGKEIMKLVTGRKPSY 440
>gi|338762831|gb|AEI98618.1| hypothetical protein 111O18.5 [Coffea canephora]
Length = 417
Score = 183 bits (465), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 112/354 (31%), Positives = 187/354 (52%), Gaps = 13/354 (3%)
Query: 14 TTATATGPKFIG-----SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLA 68
+TAT+T P I S +R +Y + + + T YT V+RLA
Sbjct: 31 STATSTKPSTISTSRAKSQLRYVYDPDKALEIYSSVSPNYTSPLSSRYTQEYT--VRRLA 88
Query: 69 NAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVL 128
+ RF IE LE K I++E F + LI YG A MF++A K F+EM ++ +
Sbjct: 89 KSHRFSDIESFLESHKNDPKITQEPFLSSLIRSYGLAGMFDHALKTFNEMDDLGTPRSTV 148
Query: 129 SFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
SFNALL AC +SK F LF ++P + G+ PD SY +IKA+ + GS +SA L E
Sbjct: 149 SFNALLSACNSSKNFGRAPELFDEVPQRYGLSPDKFSYGNLIKAYCEMGSPESALERLKE 208
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
ME+KGI + +TF T++ FY G+ +AE++W MV +V +YN R+ + I +
Sbjct: 209 MEEKGIEITAVTFTTIMHSFYKKGKNEEAERVWSEMVKRGCPIDVGAYNVRI--MHIHGE 266
Query: 249 TKKALE-LVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFK 304
+++ L+ E+ S + PD ++ L+ + G ++EA + Y +GC N A F+
Sbjct: 267 DPDSVKGLIEEISSAGLKPDTISYNYLMTSYCKSGMMDEAFKVYEDLEGNGCKPNAATFR 326
Query: 305 LLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
L+ ++C++ + + + K + + + D L+ +++ L K + +EAK ++
Sbjct: 327 TLIFYLCKRQRFETGYKVFKESVAVHKIPDFNTLKHLLEGLVKRSKFKEAKGMI 380
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 107/219 (48%), Gaps = 11/219 (5%)
Query: 76 IEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLG 135
+E + E +++ +I+ FT + + Y K E A +V+ EM R C V ++N +
Sbjct: 203 LERLKEMEEKGIEITAVTFTTIMHSFYKKGKN-EEAERVWSEMVKRGCPIDVGAYNVRI- 260
Query: 136 ACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIR 195
++ + D V GL +++ G++PD +SYN ++ ++ G +D A + ++E G +
Sbjct: 261 MHIHGEDPDSVKGLIEEI-SSAGLKPDTISYNYLMTSYCKSGMMDEAFKVYEDLEGNGCK 319
Query: 196 LDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALEL 255
+ TF TL+ RF K+++ V ++ P+ + L+GL + K+A +
Sbjct: 320 PNAATFRTLIFYLCKRQRFETGYKVFKESVAVHKIPDFNTLKHLLEGLVKRSKFKEAKGM 379
Query: 256 VGEMRSKEINPDVFTFY-------ALIKGFVNEGNLEEA 287
+ ++ K+ P+V + L+ NE +LEE
Sbjct: 380 IRTVK-KKFPPNVVKAWERLQKELGLVSVEANEVDLEET 417
>gi|449468996|ref|XP_004152207.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
mitochondrial-like [Cucumis sativus]
gi|449484169|ref|XP_004156805.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
mitochondrial-like [Cucumis sativus]
Length = 399
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 104/294 (35%), Positives = 162/294 (55%), Gaps = 3/294 (1%)
Query: 34 ENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEG 93
E + ++L FK ++ N + TV RLA A+RF +IE +LEHQK +EG
Sbjct: 47 ERDPEKLFHLFKANAHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREG 106
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
F R+I LYGKA M ++A F +M C +TV SFNA+L + S+ ++ +
Sbjct: 107 FIIRIIMLYGKAEMIKHALDTFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFLSEA 166
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
P K IE D++S N ++KAF D G L+ A L+ EMEK GI+ D++T+ TL+ Y + +
Sbjct: 167 PEKFDIELDIISVNILVKAFCDFGFLNRAYLLMLEMEKLGIKPDVVTYTTLISASYKDRQ 226
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
+ +W MV PN+ ++N R+ L ++ A +L+ MR+ I PD T+
Sbjct: 227 SEISNGLWNLMVLRGCLPNLTTFNVRIQHLIERRRAWDANKLMKMMRNIGIVPDEVTYNL 286
Query: 274 LIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCK 324
+IKGF G L+ AKR Y+ SG N I++ ++ ++C+ D + A +CK
Sbjct: 287 VIKGFCQAGLLDMAKRVYSALHGSGYKPNVKIYQTMIHYLCKSEDFNLAHTICK 340
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 79/169 (46%), Gaps = 2/169 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI+ K E + +++ M R C + +FN + + ++ + + L K + +
Sbjct: 217 LISASYKDRQSEISNGLWNLMVLRGCLPNLTTFNVRIQHLIERRRAWDANKLMK-MMRNI 275
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
GI PD V+YN +IK F G LD A + + G + ++ + T++ + F A
Sbjct: 276 GIVPDEVTYNLVIKGFCQAGLLDMAKRVYSALHGSGYKPNVKIYQTMIHYLCKSEDFNLA 335
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINP 266
I + +N N PN+ + ++ L GL + KA +L+ + K + P
Sbjct: 336 HTICKDAMNKNWFPNIDTIHSLLKGLNKMGEAGKA-QLILALARKRVPP 383
>gi|242082341|ref|XP_002445939.1| hypothetical protein SORBIDRAFT_07g028400 [Sorghum bicolor]
gi|241942289|gb|EES15434.1| hypothetical protein SORBIDRAFT_07g028400 [Sorghum bicolor]
Length = 465
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 103/301 (34%), Positives = 159/301 (52%), Gaps = 3/301 (0%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
V+ I E + +RL F+ ++ N + V RLA A+R +EEILE K
Sbjct: 102 VLVKIKHERDPERLYQLFRTNAHNRLLVENRFAFEDAVARLAGARRNDLVEEILEQHKAL 161
Query: 87 KDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEV 146
+EGF R+I LYGKA M +A + F EM C +T S NA + + ++ FDE
Sbjct: 162 PQGRREGFVVRIIGLYGKAGMPSHALRTFQEMGMYGCPRTAKSLNATMKVLLRAQMFDEA 221
Query: 147 DGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLL 206
LF++ P K G+E D +S NT++K + D G L +A ++ ME G++ D++T+ TL+
Sbjct: 222 LWLFEEGPEKYGVELDDISCNTVVKIYCDMGDLRAAYRVMQGMEGAGVQPDVVTYTTLMA 281
Query: 207 GFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINP 266
FY G+ + +W M P + +YN R+ L ++ +A ELV +M + I P
Sbjct: 282 AFYKCGQREVGDGLWNLMRLRGCEPTLATYNVRIQFLINRERGWQANELVRKMYAVGIKP 341
Query: 267 DVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLC 323
D T+ +IKGF G E AK + + GC N +++ +V ++CE+ D D AF C
Sbjct: 342 DEITYNLIIKGFFMMGEHEMAKTVFGAMHGRGCKPNSKVYQTMVHYLCERRDFDLAFRFC 401
Query: 324 K 324
K
Sbjct: 402 K 402
>gi|317106734|dbj|BAJ53230.1| JHL06P13.10 [Jatropha curcas]
Length = 399
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 107/332 (32%), Positives = 173/332 (52%), Gaps = 3/332 (0%)
Query: 34 ENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEG 93
E + ++L + FK ++ N + TV RLA A+RF +IE +LEHQK +EG
Sbjct: 47 ERDPEKLFNLFKANAQNRLVIENRFAFEDTVSRLAGARRFHYIENLLEHQKTLPQGRREG 106
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
F R+I LY KA M ++A F +M C++TV SFNA L ++ + +
Sbjct: 107 FIVRIIMLYAKAGMVKHALNTFYDMHLYGCKRTVKSFNAALKVLTGTRNMVAIQDFLCEA 166
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
P K I D+ S N IIKA + G LD A ++ + +K GI D+IT+ TL+ Y N
Sbjct: 167 PEKFDITMDIFSINIIIKALCEMGYLDKAYLVMVQFQKSGIEADVITYTTLISASYRNKL 226
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
+ +W MV +PN+ ++N R+ L +Q+ +A +++ M+ I PD T+
Sbjct: 227 WMIGNGLWNLMVLKGCKPNLATFNVRIQYLVNSRQSWEANDVMRLMQRIGIAPDQVTYNL 286
Query: 274 LIKGFVNEGNLEEAKRWYNKSGCGMNKAIFKL---LVPFVCEKGDLDFAFNLCKRTFSER 330
+IKGF G LE AKR Y+ + K FK+ ++ ++C+ G+ D A+ +CK +
Sbjct: 287 VIKGFCLAGYLEMAKRVYSALQGEVYKPNFKIYQTMIHYLCKGGEFDLAYTMCKDCMGKG 346
Query: 331 CLVDQAPLQLVVDRLAKELRVEEAKELVELGK 362
+ + +++ L K + +AK +V L K
Sbjct: 347 WYLHVDTIHALLNGLMKNGHLGKAKLIVTLAK 378
>gi|125603901|gb|EAZ43226.1| hypothetical protein OsJ_27826 [Oryza sativa Japonica Group]
Length = 515
Score = 180 bits (457), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 118/361 (32%), Positives = 185/361 (51%), Gaps = 9/361 (2%)
Query: 13 STTATATG--PKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANA 70
STT + G P ++R I E + RL + F+ ++ N + V RLA A
Sbjct: 138 STTKESAGVEPAEPPVLVR-IKNERDPVRLYELFRANAHNRLLIENRFAFEDAVARLAGA 196
Query: 71 KRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSF 130
+R +EEILE K +EGF R+I LYGKA M ++A F EM C +T S
Sbjct: 197 RRNDLVEEILEQHKALPQGRREGFVVRIIGLYGKARMPDHALSTFREMGLYGCPRTAKSL 256
Query: 131 NALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEME 190
NA + + ++ FDEV LF+ G+E D +SYNT++K D G L +A ++ EME
Sbjct: 257 NATMKVLLRARLFDEVLQLFES-SETYGVELDDISYNTVVKMMCDLGELRAAFRVMQEME 315
Query: 191 KKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTK 250
K G+R D+IT+ TL+ FY G+ + +W M P + SYN R+ L ++
Sbjct: 316 KAGVRPDVITYTTLMDAFYKCGQREVGDGLWNLMRLRGCMPTLASYNVRIQFLVNRRRGW 375
Query: 251 KALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNKAIFKLLV 307
+A +LV +M + + PD T+ +IKGF G E AK + + GC N +++ +V
Sbjct: 376 QANDLVRKMYASGLRPDEITYNLVIKGFFMMGEHEMAKTVFGAMHGRGCKPNAKVYQTMV 435
Query: 308 PFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVEL--GKTNS 365
++CE+ + D AF LCK + + + ++ L + A+E+++L G+ S
Sbjct: 436 HYLCERREFDLAFRLCKDSMEKNWFPSVDTINQLLKGLISISKDRNAREIMKLVIGRKPS 495
Query: 366 Y 366
Y
Sbjct: 496 Y 496
>gi|115477108|ref|NP_001062150.1| Os08g0499800 [Oryza sativa Japonica Group]
gi|42407346|dbj|BAD08807.1| putative drought-inducible protein 1OS [Oryza sativa Japonica
Group]
gi|113624119|dbj|BAF24064.1| Os08g0499800 [Oryza sativa Japonica Group]
gi|125562056|gb|EAZ07504.1| hypothetical protein OsI_29761 [Oryza sativa Indica Group]
gi|215716978|dbj|BAG95341.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 443
Score = 180 bits (457), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 118/361 (32%), Positives = 185/361 (51%), Gaps = 9/361 (2%)
Query: 13 STTATATG--PKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANA 70
STT + G P ++R I E + RL + F+ ++ N + V RLA A
Sbjct: 66 STTKESAGVEPAEPPVLVR-IKNERDPVRLYELFRANAHNRLLIENRFAFEDAVARLAGA 124
Query: 71 KRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSF 130
+R +EEILE K +EGF R+I LYGKA M ++A F EM C +T S
Sbjct: 125 RRNDLVEEILEQHKALPQGRREGFVVRIIGLYGKARMPDHALSTFREMGLYGCPRTAKSL 184
Query: 131 NALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEME 190
NA + + ++ FDEV LF+ G+E D +SYNT++K D G L +A ++ EME
Sbjct: 185 NATMKVLLRARLFDEVLQLFES-SETYGVELDDISYNTVVKMMCDLGELRAAFRVMQEME 243
Query: 191 KKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTK 250
K G+R D+IT+ TL+ FY G+ + +W M P + SYN R+ L ++
Sbjct: 244 KAGVRPDVITYTTLMDAFYKCGQREVGDGLWNLMRLRGCMPTLASYNVRIQFLVNRRRGW 303
Query: 251 KALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNKAIFKLLV 307
+A +LV +M + + PD T+ +IKGF G E AK + + GC N +++ +V
Sbjct: 304 QANDLVRKMYASGLRPDEITYNLVIKGFFMMGEHEMAKTVFGAMHGRGCKPNAKVYQTMV 363
Query: 308 PFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVEL--GKTNS 365
++CE+ + D AF LCK + + + ++ L + A+E+++L G+ S
Sbjct: 364 HYLCERREFDLAFRLCKDSMEKNWFPSVDTINQLLKGLISISKDRNAREIMKLVIGRKPS 423
Query: 366 Y 366
Y
Sbjct: 424 Y 424
>gi|357455193|ref|XP_003597877.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87162918|gb|ABD28713.1| Pentatricopeptide repeat [Medicago truncatula]
gi|355486925|gb|AES68128.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 439
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/339 (30%), Positives = 175/339 (51%), Gaps = 4/339 (1%)
Query: 28 IRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYK 87
+ + E + +L FK ++ N + TV RLA AKRF +IE++LE QK+
Sbjct: 80 LEALKSEWDPHKLFHIFKSNATNPIVVENRFAFYDTVSRLAGAKRFDYIEQLLEQQKKLP 139
Query: 88 DISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVD 147
+EGF R+I LYG A M ++A F +M C +TV SFNA L S+ FDE+
Sbjct: 140 QSRREGFVVRIITLYGNAGMIQHALNTFYQMGDFRCVRTVKSFNATLNVLAKSRDFDEIS 199
Query: 148 GLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE-MEKKGIRLDLITFNTLLL 206
++P + I D+ S N +KAF + L A + + + KG++ D++T+ TL+
Sbjct: 200 RFLNEVPRRFDIRLDVYSVNIAVKAFCEAEKLKEAYLFMLDCVNNKGVKPDVVTYTTLIS 259
Query: 207 GFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINP 266
FY + R+ +W MV V PN+ ++N R+ L ++ A +L+ M+ + P
Sbjct: 260 AFYDHKRWEIGNGLWNQMVLKGVMPNLHTFNVRIQFLVTVRRVWDANKLMALMQRNGVTP 319
Query: 267 DVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLC 323
D T +IKGF G E A R Y + G ++ I++ ++ +C++GD A+ LC
Sbjct: 320 DEVTLVLVIKGFFRAGYPEMAMRVYSALHDKGYKISANIYQTMIHNLCKRGDFSQAYTLC 379
Query: 324 KRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGK 362
K + + + + ++++ L K ++ +AK +V L +
Sbjct: 380 KDSMRKNWFPNVDTIFMLLEGLKKSGKINKAKVIVALAE 418
>gi|449454724|ref|XP_004145104.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
mitochondrial-like [Cucumis sativus]
gi|449471723|ref|XP_004153390.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
mitochondrial-like [Cucumis sativus]
gi|449530564|ref|XP_004172264.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
mitochondrial-like [Cucumis sativus]
Length = 405
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 107/328 (32%), Positives = 177/328 (53%), Gaps = 3/328 (0%)
Query: 34 ENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEG 93
E N +R++D + +S F + ++ + +L+ K F I LE K D+ E
Sbjct: 55 EENPERIIDICRAASLTPEFHLDRIAFSVAISKLSKFKHFDGIRRFLEELKSRPDLKNER 114
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
F I LYG+A M ++A + F ++ +V + NALL AC +K + E+ ++ +
Sbjct: 115 FACHAIVLYGQANMLDHAIRTFKQIDELGVRHSVKTLNALLFACNLAKDYKELKRVYMEF 174
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
P GIEPD+ +YN +IKAF + GS S ++++ EM++K ++ + TF L G Y +
Sbjct: 175 PKIYGIEPDIDTYNRVIKAFSESGSSSSVSSIVAEMDRKDVKPNATTFANWLAGCYMEEK 234
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
F D EK+ M VR V +YNAR+ L K++ +A L M S+ ++P+ T+
Sbjct: 235 FEDVEKVLNLMEKYGVRRGVATYNARIRSLCKLKRSTEAKALFDGMLSRGMDPNSVTYCE 294
Query: 274 LIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSER 330
LI GF EGNL+EAK + + SGC + + L F+C GD + AF +C + +
Sbjct: 295 LIHGFCKEGNLDEAKSIFKRMINSGCQPDSECYFTLTYFLCRGGDYETAFKICLESMKKG 354
Query: 331 CLVDQAPLQLVVDRLAKELRVEEAKELV 358
+ + + ++ +VD L +VEEAK+L+
Sbjct: 355 WVPNFSTMKSLVDGLVSISKVEEAKQLI 382
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 74/155 (47%), Gaps = 1/155 (0%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
FE+ KV + M + V ++NA + + K+ E LF + + G++P+ V+Y
Sbjct: 235 FEDVEKVLNLMEKYGVRRGVATYNARIRSLCKLKRSTEAKALFDGMLSR-GMDPNSVTYC 293
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
+I F +G+LD A ++ M G + D + TL G + A KI +
Sbjct: 294 ELIHGFCKEGNLDEAKSIFKRMINSGCQPDSECYFTLTYFLCRGGDYETAFKICLESMKK 353
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
PN + + +DGL + ++A +L+G+++ +
Sbjct: 354 GWVPNFSTMKSLVDGLVSISKVEEAKQLIGQIKER 388
>gi|359494840|ref|XP_003634851.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
mitochondrial-like [Vitis vinifera]
Length = 396
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 98/302 (32%), Positives = 170/302 (56%), Gaps = 3/302 (0%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMP 119
++ + +LA++K F I L+ K D+ E F + I L+G+A M +A + F++M
Sbjct: 72 FSVAISKLADSKHFDSIRHFLDELKARPDLRTERFVSHAIVLFGQAGMLNDAVRTFEQMH 131
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL 179
++TV S NALL +C+ +K + E + +F + P GIE +L SYNT++KAF + GS
Sbjct: 132 QLGVDRTVRSLNALLFSCILAKNYKEANRIFLEFPKTYGIELNLDSYNTVLKAFSESGSS 191
Query: 180 DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNAR 239
S ++L EM +KG++ + +F LL GFY+ ++ D K+ + M ++P + +YN R
Sbjct: 192 SSGYSILAEMGRKGVKPNATSFGILLAGFYNEEKYEDVGKVLKMMEEYKMQPGISTYNIR 251
Query: 240 LDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGC 296
+ L K++ +A L+ + ++ + P+ T+ LI GF EGNL+EAK+ + GC
Sbjct: 252 IQSLCKLKKSSEAKALLDGILARRMKPNSETYCHLIHGFCKEGNLDEAKKLFKDMVNRGC 311
Query: 297 GMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKE 356
+ + LV F+C+ GD + A CK + + + + +V+ L +VEEA+E
Sbjct: 312 KPDSDCYFTLVYFLCQGGDFESALRFCKECMEKGWFPNISTMTSLVNGLVSISKVEEARE 371
Query: 357 LV 358
L+
Sbjct: 372 LI 373
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 76/165 (46%), Gaps = 1/165 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+A + +E+ KV M + + ++N + + KK E L + +
Sbjct: 216 LLAGFYNEEKYEDVGKVLKMMEEYKMQPGISTYNIRIQSLCKLKKSSEAKALLDGILAR- 274
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
++P+ +Y +I F +G+LD A L +M +G + D + TL+ G F A
Sbjct: 275 RMKPNSETYCHLIHGFCKEGNLDEAKKLFKDMVNRGCKPDSDCYFTLVYFLCQGGDFESA 334
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
+ + + PN+ + + ++GL + ++A EL+G+++ K
Sbjct: 335 LRFCKECMEKGWFPNISTMTSLVNGLVSISKVEEARELIGQIKEK 379
>gi|147767812|emb|CAN77919.1| hypothetical protein VITISV_027645 [Vitis vinifera]
Length = 396
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 98/302 (32%), Positives = 170/302 (56%), Gaps = 3/302 (0%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMP 119
++ + +LA++K F I L+ K D+ E F + I L+G+A M +A + F++M
Sbjct: 72 FSVAISKLADSKHFDSIRHFLDELKARPDLRTERFVSHAIVLFGQAGMLNDAVRTFEQMH 131
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL 179
++TV S NALL +C+ +K + E + +F + P GIE +L SYNT++KAF + GS
Sbjct: 132 QLGVDRTVRSLNALLFSCILAKNYKEANRIFLEFPKTYGIELNLDSYNTVLKAFSESGSS 191
Query: 180 DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNAR 239
S ++L EM +KG++ + +F LL GFY+ ++ D K+ + M ++P + +YN R
Sbjct: 192 SSGYSILAEMGRKGVKPNATSFGILLAGFYNEEKYEDVGKVLKMMEEYKMQPGISTYNIR 251
Query: 240 LDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGC 296
+ L K++ +A L+ + ++ + P+ T+ LI GF EGNL+EAK+ + GC
Sbjct: 252 IQSLCKLKKSSEAKALLDGILARRMKPNSETYCHLIHGFCKEGNLDEAKKLFKDMVNRGC 311
Query: 297 GMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKE 356
+ + LV F+C+ GD + A CK + + + + +V+ L +VEEA+E
Sbjct: 312 KPDSDCYFTLVYFLCQGGDFESALRFCKECMEKGWFPNISTMTSLVNGLVSISKVEEAQE 371
Query: 357 LV 358
L+
Sbjct: 372 LI 373
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 76/165 (46%), Gaps = 1/165 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+A + +E+ KV M + + ++N + + KK E L + +
Sbjct: 216 LLAGFYNEEKYEDVGKVLKMMEEYKMQPGISTYNIRIQSLCKLKKSSEAKALLDGILAR- 274
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
++P+ +Y +I F +G+LD A L +M +G + D + TL+ G F A
Sbjct: 275 RMKPNSETYCHLIHGFCKEGNLDEAKKLFKDMVNRGCKPDSDCYFTLVYFLCQGGDFESA 334
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
+ + + PN+ + + ++GL + ++A EL+G+++ K
Sbjct: 335 LRFCKECMEKGWFPNISTMTSLVNGLVSISKVEEAQELIGQIKEK 379
>gi|15220068|ref|NP_178132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806404|sp|Q8GW57.2|PP134_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g80150, mitochondrial; Flags: Precursor
gi|332198242|gb|AEE36363.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 397
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 111/368 (30%), Positives = 189/368 (51%), Gaps = 18/368 (4%)
Query: 10 CSFSTTATATGPKFIGS---VIRGIY-----------KENNLKRLVDKFKKSSDLGRFRT 55
C F ++A ATG ++ + I+G+ E + ++L + FK ++
Sbjct: 11 CHFPSSA-ATGIAYVSTESNQIQGLKPLEEPALVKLKSERDPEKLYNLFKANATNRLVIE 69
Query: 56 NTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVF 115
N + TV RLA A R +IE++LEHQK +EGF R+I LYGKA M + A F
Sbjct: 70 NRFAFEDTVSRLAGAGRLDFIEDLLEHQKTLPQGRREGFIVRIIMLYGKAGMTKQALDTF 129
Query: 116 DEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVD 175
M C+++V SFNA L + + D P K GI+ D VS+N IK+F +
Sbjct: 130 FNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDIDAVSFNIAIKSFCE 189
Query: 176 KGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRS 235
G LD A + EMEK G+ D++T+ TL+ Y + R +W MV +PN+ +
Sbjct: 190 LGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMVLKGCKPNLTT 249
Query: 236 YNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY---N 292
+N R+ L ++ A +L+ M ++ PD T+ +IKGF + A+R Y +
Sbjct: 250 FNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAERVYTAMH 309
Query: 293 KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVE 352
G N I++ ++ ++C+ G+ D A+ +CK ++ + +++++ L K+ +++
Sbjct: 310 GKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVKKGQLD 369
Query: 353 EAKELVEL 360
+AK ++EL
Sbjct: 370 QAKSIMEL 377
>gi|5902386|gb|AAD55488.1|AC009322_28 Hypothetical protein [Arabidopsis thaliana]
Length = 419
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 111/368 (30%), Positives = 189/368 (51%), Gaps = 18/368 (4%)
Query: 10 CSFSTTATATGPKFIGS---VIRGIY-----------KENNLKRLVDKFKKSSDLGRFRT 55
C F ++A ATG ++ + I+G+ E + ++L + FK ++
Sbjct: 11 CHFPSSA-ATGIAYVSTESNQIQGLKPLEEPALVKLKSERDPEKLYNLFKANATNRLVIE 69
Query: 56 NTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVF 115
N + TV RLA A R +IE++LEHQK +EGF R+I LYGKA M + A F
Sbjct: 70 NRFAFEDTVSRLAGAGRLDFIEDLLEHQKTLPQGRREGFIVRIIMLYGKAGMTKQALDTF 129
Query: 116 DEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVD 175
M C+++V SFNA L + + D P K GI+ D VS+N IK+F +
Sbjct: 130 FNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDIDAVSFNIAIKSFCE 189
Query: 176 KGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRS 235
G LD A + EMEK G+ D++T+ TL+ Y + R +W MV +PN+ +
Sbjct: 190 LGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMVLKGCKPNLTT 249
Query: 236 YNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY---N 292
+N R+ L ++ A +L+ M ++ PD T+ +IKGF + A+R Y +
Sbjct: 250 FNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAERVYTAMH 309
Query: 293 KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVE 352
G N I++ ++ ++C+ G+ D A+ +CK ++ + +++++ L K+ +++
Sbjct: 310 GKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVKKGQLD 369
Query: 353 EAKELVEL 360
+AK ++EL
Sbjct: 370 QAKSIMEL 377
>gi|297842851|ref|XP_002889307.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335148|gb|EFH65566.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 397
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 111/368 (30%), Positives = 187/368 (50%), Gaps = 18/368 (4%)
Query: 10 CSFSTTATATGPKFIGS---VIRGIY-----------KENNLKRLVDKFKKSSDLGRFRT 55
C FS++A ATG ++ + I+G+ E + ++L F+ ++
Sbjct: 11 CHFSSSA-ATGIAYVSTDSNQIQGLKPLEEPALVKLKSERDPEKLFKLFQANATNRLVIE 69
Query: 56 NTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVF 115
N + TV RLA A R +IE++LEHQK +EGF R+I LYGKA M + A F
Sbjct: 70 NRFAFEDTVSRLAGAGRLDFIEDLLEHQKTLPQGRREGFIVRIIMLYGKAGMTKQALDTF 129
Query: 116 DEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVD 175
M C+++V SFNA L + D P K I+ D VS+N IK+F +
Sbjct: 130 YNMDLYGCKRSVKSFNAALQVLSFKPDLHTIREFLHDAPAKYRIDIDAVSFNIAIKSFCE 189
Query: 176 KGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRS 235
G LD A + EMEK G++ D++T+ TL+ FY + R +W MV RPN+ +
Sbjct: 190 LGILDGAYMAMREMEKSGLKPDVVTYTTLISAFYKHERCVIGNGLWNLMVLKGCRPNLTT 249
Query: 236 YNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY---N 292
+N R+ L ++ A +L+ M ++ PD T+ +IKGF A+R Y +
Sbjct: 250 FNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPHMAERVYTAMH 309
Query: 293 KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVE 352
G N I++ ++ ++C+ G+ D A+ +CK ++ + +++++ L K+ +++
Sbjct: 310 GKGYKPNVKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVKKDQLD 369
Query: 353 EAKELVEL 360
+AK ++ L
Sbjct: 370 QAKSIMGL 377
>gi|156070758|gb|ABU45173.1| unknown [Solanum melongena]
Length = 427
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 95/296 (32%), Positives = 167/296 (56%), Gaps = 6/296 (2%)
Query: 64 VQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNC 123
V+RLA + RF IE LE K I++E F + +I YG A MF++A K++ +M
Sbjct: 72 VKRLAKSHRFSDIENFLESHKNSPKITQEPFLSSIIRSYGVARMFDHALKIYHQMDDLGT 131
Query: 124 EQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSAN 183
++ +SFN LL AC++SK +D V LF ++P K G PD VSY +I+++ + G + A
Sbjct: 132 PRSAISFNVLLSACMHSKLYDRVAQLFDEIPVKYGFLPDKVSYGVLIRSYCEMGLPEMAM 191
Query: 184 TLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
EME+KG+ + + F T+L FY G+ +AE++W MV+ P+V +YN ++ +
Sbjct: 192 ERFKEMEEKGVEITAVAFTTILHSFYKKGKSDEAERVWNEMVSRGCGPDVGAYNVKI--M 249
Query: 244 AIEKQTKKALE-LVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMN 299
I+ + ++ L+ EM + + PD ++ L+ + ++EA++ Y +GC N
Sbjct: 250 NIQGSKPEGVKALIEEMSNAGLKPDTISYNYLMTCYCKNQLMDEAQKVYEDLKTNGCNPN 309
Query: 300 KAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAK 355
A F+ L+ ++C+KG + + + + + S + D L+ +V+ L K+ R +AK
Sbjct: 310 AATFRTLIFYLCKKGRFETGYKVFRESVSVHKIPDFITLKYLVEGLVKKSRWRDAK 365
>gi|297743432|emb|CBI36299.3| unnamed protein product [Vitis vinifera]
Length = 353
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 97/256 (37%), Positives = 138/256 (53%)
Query: 34 ENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEG 93
E + +RL FK ++ N + TV RLA A RF +IE +LEHQK +EG
Sbjct: 52 ERDPERLFQLFKANAHNRLVVENRFAFEDTVSRLAGAGRFDYIEHLLEHQKTLPQGRREG 111
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
F R+I LYGKA M + A F +M C++TV SFNA L S + +D +D+
Sbjct: 112 FIVRIIMLYGKAGMIKQAVDTFYDMHLFGCQRTVKSFNAALKVLTQSYDLEAIDLFLRDV 171
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
P K GIE D+ S N +IKA D L+ A ++ EMEK G+ D++T+ TL+ FY + R
Sbjct: 172 PFKFGIELDVFSVNIVIKALCDMDILEKAYMVMIEMEKAGVNPDVVTYTTLISAFYKSNR 231
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
+ +W MV PN+ ++N R+ L ++ +A L+G M I PD T+
Sbjct: 232 WEVGNGLWNLMVMKGCLPNLATFNVRIQYLVNRRRAWQANSLMGMMEYLGITPDEVTYNL 291
Query: 274 LIKGFVNEGNLEEAKR 289
+IKGF G LE AK+
Sbjct: 292 VIKGFCQAGYLEMAKK 307
>gi|26453140|dbj|BAC43646.1| unknown protein [Arabidopsis thaliana]
gi|28950987|gb|AAO63417.1| At1g80150 [Arabidopsis thaliana]
Length = 397
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 110/368 (29%), Positives = 189/368 (51%), Gaps = 18/368 (4%)
Query: 10 CSFSTTATATGPKFIGS---VIRGIY-----------KENNLKRLVDKFKKSSDLGRFRT 55
C F ++A ATG ++ + I+G+ E + ++L + FK ++
Sbjct: 11 CHFPSSA-ATGIAYVSTESNQIQGLKPLEEPALVKLKSERDPEKLYNLFKANATNRLVIE 69
Query: 56 NTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVF 115
N + TV RLA A R +IE++LEHQK +EGF R+I LYGKA M + A F
Sbjct: 70 NRFAFEDTVSRLAGAGRLDFIEDLLEHQKTLPQGRREGFMVRIIMLYGKAGMTKQALDTF 129
Query: 116 DEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVD 175
M C+++V SFNA L + + D P K GI+ D VS+N IK+F +
Sbjct: 130 FNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDIDAVSFNIAIKSFCE 189
Query: 176 KGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRS 235
G LD A + EMEK G+ D++T+ TL+ Y + R +W +V +PN+ +
Sbjct: 190 LGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLIVLKGCKPNLTT 249
Query: 236 YNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY---N 292
+N R+ L ++ A +L+ M ++ PD T+ +IKGF + A+R Y +
Sbjct: 250 FNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAERVYTAMH 309
Query: 293 KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVE 352
G N I++ ++ ++C+ G+ D A+ +CK ++ + +++++ L K+ +++
Sbjct: 310 GKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVKKGQLD 369
Query: 353 EAKELVEL 360
+AK ++EL
Sbjct: 370 QAKSIMEL 377
>gi|18407365|ref|NP_564786.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806489|sp|Q8LE47.2|PPR87_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g61870, mitochondrial; AltName: Full=Protein
PENTATRICOPEPTIDE REPEAT 336; Flags: Precursor
gi|16226403|gb|AAL16159.1|AF428391_1 At1g61870/F8K4_8 [Arabidopsis thaliana]
gi|3367521|gb|AAC28506.1| Similar to gb|U08285 membrane-associated salt-inducible protein
from Nicotiana tabacum. ESTs gb|T44131 and gb|T04378
come from this gene [Arabidopsis thaliana]
gi|17065564|gb|AAL32936.1| Unknown protein [Arabidopsis thaliana]
gi|32815835|gb|AAP88326.1| At1g61870 [Arabidopsis thaliana]
gi|332195777|gb|AEE33898.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 408
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 104/329 (31%), Positives = 183/329 (55%), Gaps = 4/329 (1%)
Query: 34 ENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILE-HQKQYKDISKE 92
E + R+++ + +S R + ++ V+ LA K F + +L+ + D+ E
Sbjct: 57 EKDPDRILEICRAASLTPDCRIDRIAFSAAVENLAEKKHFSAVSNLLDGFIENRPDLKSE 116
Query: 93 GFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKD 152
F A I LY +A M +++ +VF ++ +TV S NALL AC+ +K + E ++ +
Sbjct: 117 RFAAHAIVLYAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIE 176
Query: 153 LPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNG 212
+P GIEPDL +YN +IK F + GS S+ +++ EME+KGI+ + +F ++ GFY+
Sbjct: 177 MPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAED 236
Query: 213 RFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFY 272
+ + K+ M + V V +YN R+ L K++K+A L+ M S + P+ T+
Sbjct: 237 KSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYS 296
Query: 273 ALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSE 329
LI GF NE + EEAK+ + GC + + L+ ++C+ GD + A +LCK + +
Sbjct: 297 HLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEK 356
Query: 330 RCLVDQAPLQLVVDRLAKELRVEEAKELV 358
+ + ++ +V+ LAK+ +VEEAKEL+
Sbjct: 357 NWVPSFSIMKSLVNGLAKDSKVEEAKELI 385
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 69/150 (46%), Gaps = 1/150 (0%)
Query: 113 KVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKA 172
KV M R V ++N + + KK E L + G++P+ V+Y+ +I
Sbjct: 243 KVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGM-LSAGMKPNTVTYSHLIHG 301
Query: 173 FVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPN 232
F ++ + A L M +G + D + TL+ G F A + + + N P+
Sbjct: 302 FCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPS 361
Query: 233 VRSYNARLDGLAIEKQTKKALELVGEMRSK 262
+ ++GLA + + ++A EL+G+++ K
Sbjct: 362 FSIMKSLVNGLAKDSKVEEAKELIGQVKEK 391
>gi|297798228|ref|XP_002866998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312834|gb|EFH43257.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 411
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 189/352 (53%), Gaps = 8/352 (2%)
Query: 13 STTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTG-TVQRLANAK 71
+TTA ++G + + KE++ + + + SD ++ TV+RLA +
Sbjct: 22 TTTAPSSGKISVSKAKSTLRKEHDPDKALKIYANVSDHSASPVSSRYAQELTVRRLAKCR 81
Query: 72 RFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFN 131
RF IE ++E K I +E F + LI YG+A+MF++A + F++M ++ +SFN
Sbjct: 82 RFSDIETLIESHKNDPKIKEEPFYSTLIRSYGRASMFDHAMRTFEQMDQYGTPRSAVSFN 141
Query: 132 ALLGACVNSKKFDEVDGLFKDLPHKLG-IEPDLVSYNTIIKAFVDKGSLDSANTLLYEME 190
ALL AC++SKKFD+V LF ++P + I PD +SY +IK++ D GS A ++ +M+
Sbjct: 142 ALLNACLHSKKFDKVPQLFDEIPQRYNKIVPDKISYGILIKSYCDSGSPQKAIEIMRQMQ 201
Query: 191 KKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQT- 249
KG+ + I F T+L Y G AE +W MV + +YN R+ ++ +K++
Sbjct: 202 GKGMEVTTIAFTTILSSLYKKGELEVAESLWNEMVKKGCELDNAAYNVRI--MSAQKESP 259
Query: 250 KKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNKAIFKLL 306
++ EL+ EM + + PD ++ L+ + +G L+EAK+ Y + C N A F+ L
Sbjct: 260 ERVKELIEEMSTMGLKPDTISYNYLMTAYCEKGMLDEAKKVYEGLEGNNCAPNSATFRTL 319
Query: 307 VPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
+ +C + + + K++ + D L+ + L ++ ++++AK L+
Sbjct: 320 IFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLAVGLVEKKKIDDAKGLI 371
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 91/189 (48%), Gaps = 3/189 (1%)
Query: 74 RWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNAL 133
+ IE + + Q + +++ FT L +LY K + E A +++EM + CE ++N
Sbjct: 192 KAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGEL-EVAESLWNEMVKKGCELDNAAYNVR 250
Query: 134 LGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKG 193
+ + + + V L +++ +G++PD +SYN ++ A+ +KG LD A + +E
Sbjct: 251 IMS-AQKESPERVKELIEEM-STMGLKPDTISYNYLMTAYCEKGMLDEAKKVYEGLEGNN 308
Query: 194 IRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKAL 253
+ TF TL+ + + I++ V M+ P+ + GL +K+ A
Sbjct: 309 CAPNSATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLAVGLVEKKKIDDAK 368
Query: 254 ELVGEMRSK 262
L+ ++ K
Sbjct: 369 GLIRTVKKK 377
>gi|18398767|ref|NP_565439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216725|sp|Q9ZU67.1|PP162_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g18520, mitochondrial; Flags: Precursor
gi|4218007|gb|AAD12215.1| expressed protein [Arabidopsis thaliana]
gi|21617890|gb|AAM66940.1| membrane-associated salt-inducible protein like [Arabidopsis
thaliana]
gi|330251683|gb|AEC06777.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 418
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 105/304 (34%), Positives = 165/304 (54%), Gaps = 9/304 (2%)
Query: 63 TVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRN 122
TVQRLA ++RF IE ++E K I E F + LI YG+A+MF++A K+F+EM
Sbjct: 73 TVQRLAKSQRFSDIEALIESHKNNPKIKTETFLSTLIRSYGRASMFDHAMKMFEEMDKLG 132
Query: 123 CEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL-GIEPDLVSYNTIIKAFVDKGSLDS 181
+TV+SFNALL AC++S F+ V LF + P + I PD +SY +IK++ D G +
Sbjct: 133 TPRTVVSFNALLAACLHSDLFERVPQLFDEFPQRYNNITPDKISYGMLIKSYCDSGKPEK 192
Query: 182 ANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLD 241
A ++ +ME KG+ + +I F T+L Y NG +AE +W MVN + YN RL
Sbjct: 193 AMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKGCDLDNTVYNVRLM 252
Query: 242 GLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGM--- 298
A E ++ EL+ EM S + PD ++ L+ + +G + EAK+ Y G+
Sbjct: 253 NAAKE-SPERVKELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEAKKVYE----GLEQP 307
Query: 299 NKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
N A F+ L+ +C G D + K++ + D + + + L K R+E+A+ +
Sbjct: 308 NAATFRTLIFHLCINGLYDQGLTVFKKSAIVHKIPDFKTCKHLTEGLVKNNRMEDARGVA 367
Query: 359 ELGK 362
+ K
Sbjct: 368 RIVK 371
>gi|297836596|ref|XP_002886180.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332020|gb|EFH62439.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 421
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 106/297 (35%), Positives = 163/297 (54%), Gaps = 9/297 (3%)
Query: 63 TVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRN 122
TVQRLA ++RF IE ++E K I E F + LI YG+A+MF++A K+F+EM
Sbjct: 69 TVQRLAKSQRFSDIEALIESHKNNPKIKTETFLSTLIRSYGRASMFDHAMKMFEEMDQIG 128
Query: 123 CEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL-GIEPDLVSYNTIIKAFVDKGSLDS 181
+TV+SFNALL AC++S F+ V LF ++P + I PD VSY +IK++ D GS +
Sbjct: 129 TPRTVVSFNALLAACLHSDLFERVPQLFDEIPQRYNNITPDKVSYGMLIKSYCDSGSPEK 188
Query: 182 ANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLD 241
A ++ +ME KG+ + +I F T+L Y NG AE +W MVN + YN RL
Sbjct: 189 AMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDVAESLWTEMVNKGCELDNTVYNVRLM 248
Query: 242 GLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGM--- 298
A E ++ EL+ EM S + PD ++ L+ + +G + EAK+ Y G+
Sbjct: 249 NAAKE-SPERVEELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMGEAKKVYE----GLEQP 303
Query: 299 NKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAK 355
N A F+ L+ +C G D + K++ + D + + + L K R+E+A+
Sbjct: 304 NAATFRTLIFRLCINGLYDQGLTVFKKSAIVHKIPDFKTCKHLTEGLVKNNRMEDAR 360
>gi|297837243|ref|XP_002886503.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332344|gb|EFH62762.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 408
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 100/303 (33%), Positives = 173/303 (57%), Gaps = 4/303 (1%)
Query: 60 YTGTVQRLANAKRFRWIEEILE-HQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEM 118
++ V+ LA K F + +L+ + +D+ E F A I LY +A M +++ +VF ++
Sbjct: 83 FSAAVENLAEKKHFSAVSNLLDGFIENRQDLKSERFAAHAIVLYAQANMLDHSLRVFRDL 142
Query: 119 PGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGS 178
+TV S NALL AC+ +K + E ++ ++P GIEPDL +YN +IK F + GS
Sbjct: 143 EKFEIPRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGS 202
Query: 179 LDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNA 238
S+ +++ EME+KGI+ + +F ++ GFYS + + K+ M + V V +YN
Sbjct: 203 ASSSYSIVAEMERKGIKPNSSSFGLMISGFYSEDKNDEVGKVLVMMKDRGVNIGVSTYNI 262
Query: 239 RLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSG 295
R+ L K++K+A L+ M S + P+ T+ LI+GF NE + EEAK+ + G
Sbjct: 263 RIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIRGFCNEDDFEEAKKLFKVMVNRG 322
Query: 296 CGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAK 355
C + + L+ ++C+ GD + A LCK + + + + ++ +V+ LAK+ +V+EAK
Sbjct: 323 CKPDSECYFTLIYYLCKGGDFETALVLCKESMEKNWVPSFSIMKSLVNGLAKDSKVDEAK 382
Query: 356 ELV 358
EL+
Sbjct: 383 ELI 385
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 69/150 (46%), Gaps = 1/150 (0%)
Query: 113 KVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKA 172
KV M R V ++N + + KK E L D G++P+ V+Y+ +I+
Sbjct: 243 KVLVMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALL-DGMLSAGMKPNTVTYSHLIRG 301
Query: 173 FVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPN 232
F ++ + A L M +G + D + TL+ G F A + + + N P+
Sbjct: 302 FCNEDDFEEAKKLFKVMVNRGCKPDSECYFTLIYYLCKGGDFETALVLCKESMEKNWVPS 361
Query: 233 VRSYNARLDGLAIEKQTKKALELVGEMRSK 262
+ ++GLA + + +A EL+G+++ K
Sbjct: 362 FSIMKSLVNGLAKDSKVDEAKELIGQVKEK 391
>gi|224094727|ref|XP_002310210.1| predicted protein [Populus trichocarpa]
gi|222853113|gb|EEE90660.1| predicted protein [Populus trichocarpa]
Length = 396
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 99/299 (33%), Positives = 162/299 (54%), Gaps = 4/299 (1%)
Query: 63 TVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRN 122
TV+RLA + RF IE ++E K I +E F + LI YG A MF+ A K + EM
Sbjct: 61 TVRRLAKSHRFADIESLMESHKSDPKIKQEPFLSSLIRSYGVAGMFDQALKTYQEMDQLG 120
Query: 123 CEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSA 182
++ +SFNALL AC+ SK + +V LF ++ K + PD VSY ++KA+ + G + A
Sbjct: 121 TPRSCISFNALLSACIQSKLYKKVPVLFNEISEKYRVLPDTVSYGMLVKAYCEDGKPEKA 180
Query: 183 NTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDG 242
+L EMEKKG+ + I +L YS G+ +AE+ + MV + YN ++
Sbjct: 181 IEVLGEMEKKGVEVTAIVCTPVLNCLYSKGKKDEAERFLDGMVERGCELDAVVYNVKISN 240
Query: 243 LAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMN 299
A+ + ++ EL+ EM S + PD ++ L+ + G +EEAK+ Y + GC N
Sbjct: 241 -AVSQGPERVKELIEEMESYGLKPDTISYNYLMTSYCTSGMMEEAKKVYEEFRVHGCKAN 299
Query: 300 KAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
A F+ LV +C+ G+ + + + K + + D L+ +V L ++ +++EAK L+
Sbjct: 300 AATFRTLVFNLCKSGEYEKGYEIFKDSVKVHRIPDFNTLKYLVKGLVEKKKIKEAKGLI 358
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 93/194 (47%), Gaps = 3/194 (1%)
Query: 69 NAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVL 128
+ K + IE + E +K+ +++ T L LY K E A + D M R CE +
Sbjct: 174 DGKPEKAIEVLGEMEKKGVEVTAIVCTPVLNCLYSKGKKDE-AERFLDGMVERGCELDAV 232
Query: 129 SFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
+N + V S+ + V L +++ G++PD +SYN ++ ++ G ++ A + E
Sbjct: 233 VYNVKISNAV-SQGPERVKELIEEM-ESYGLKPDTISYNYLMTSYCTSGMMEEAKKVYEE 290
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
G + + TF TL+ +G + +I++ V ++ P+ + + GL +K+
Sbjct: 291 FRVHGCKANAATFRTLVFNLCKSGEYEKGYEIFKDSVKVHRIPDFNTLKYLVKGLVEKKK 350
Query: 249 TKKALELVGEMRSK 262
K+A L+ M+ K
Sbjct: 351 IKEAKGLIRTMKKK 364
>gi|224134358|ref|XP_002327818.1| predicted protein [Populus trichocarpa]
gi|222836903|gb|EEE75296.1| predicted protein [Populus trichocarpa]
Length = 397
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/278 (34%), Positives = 154/278 (55%), Gaps = 8/278 (2%)
Query: 63 TVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRN 122
TV+RLA + RF IE ++E +K I +E F + LI YG A MF+ A K + +M
Sbjct: 62 TVRRLATSHRFTDIESLIESRKTDPKIKQEPFLSSLIRSYGVAGMFDQAMKTYHQMDQLG 121
Query: 123 CEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSA 182
++ +SFNALL ACV S+ +++V GLF ++ K + PD VSY ++K++ + G D A
Sbjct: 122 TPRSSISFNALLSACVQSRLYNKVPGLFDEISEKYRVLPDKVSYGILVKSYCEDGKPDKA 181
Query: 183 NTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDG 242
N +L EMEKKG+ + + + TLL YS G+ +AE+ W MV + YN ++
Sbjct: 182 NEVLREMEKKGVEVTTVVYTTLLNCLYSKGKNEEAERFWHAMVKRGCELDAAVYNVKISN 241
Query: 243 LAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMN 299
A+++ ++ EL+ +M + + PD ++ LI + G +E+AK+ Y GC N
Sbjct: 242 -AMKQGPERVKELIEDMENSALKPDTISYNYLITSYCMTGMMEDAKKVYEGLEGYGCKAN 300
Query: 300 KAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAP 337
A F+ LV +C+ G+ + + R F E V + P
Sbjct: 301 AATFRTLVFHLCKNGEYEKGY----RLFKESVRVHRIP 334
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 90/191 (47%), Gaps = 4/191 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L LY K E A + + M R CE +N + + + V L +D+ +
Sbjct: 204 LNCLYSKGKN-EEAERFWHAMVKRGCELDAAVYNVKISNAMKQGP-ERVKELIEDMENS- 260
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
++PD +SYN +I ++ G ++ A + +E G + + TF TL+ NG +
Sbjct: 261 ALKPDTISYNYLITSYCMTGMMEDAKKVYEGLEGYGCKANAATFRTLVFHLCKNGEYEKG 320
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++++ V ++ P+ + +GLA +K+ K+A L+ M+ K+ P++ + ++
Sbjct: 321 YRLFKESVRVHRIPDFNTLKYLAEGLAEKKKMKEAKGLIRTMK-KKFPPNLLNAWKKVEE 379
Query: 278 FVNEGNLEEAK 288
+ + EE K
Sbjct: 380 SLGLHSTEEDK 390
>gi|255554937|ref|XP_002518506.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542351|gb|EEF43893.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 397
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 111/357 (31%), Positives = 195/357 (54%), Gaps = 11/357 (3%)
Query: 12 FSTTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAK 71
FSTT ++ + + I + E N +++++ +S + ++ + +L+ +
Sbjct: 19 FSTTPLSSKER-TRAAISLLKSEENPQKIIEICNSASLTPEAHLDRIAFSVAITKLSKSN 77
Query: 72 RFRWIEEILEHQKQYK-DI-SKEGFTARLIALYGKAAMFENARKVFDE----MPGRNCEQ 125
F +I++ L+ + + D+ + E F A I L+G+AAM ++A + F E + G
Sbjct: 78 NFSFIQQFLDDLRVSRPDLRTSERFAAHAIVLFGQAAMVDHAVRTFKEYHTDVIGLGNNG 137
Query: 126 TVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTL 185
+V FNALL AC +K + EV +F + P IEP+L SYNT+IK+F D S S ++
Sbjct: 138 SVKVFNALLFACYLAKDYSEVKRVFLEFPKNYNIEPNLDSYNTVIKSFCDSESSSSGFSV 197
Query: 186 LYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVN-MNVRPNVRSYNARLDGLA 244
L EM++K ++ + TF LL GFY ++ D K+ E M + +RP V +YN R+ L
Sbjct: 198 LAEMDRKRLKPNATTFGHLLAGFYKEEKYEDVGKVLEMMKDKYGIRPGVSTYNIRIQSLC 257
Query: 245 IEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKA 301
K++ +A L+ M S+++ P+ T+ LI GF NEG+LE KR + G + A
Sbjct: 258 KLKKSAEAKALLDGMLSRQMKPNSVTYAHLIHGFCNEGDLEGGKRLFKDMVNRGYQPDSA 317
Query: 302 IFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
+ L+ ++C+ D + A +CK + + + + A ++ +V+ LA +V+EAKEL+
Sbjct: 318 CYFTLLHYLCKGQDFETALRICKESIGKDWVPNIATMKSLVNGLAGIGKVDEAKELI 374
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 78/168 (46%), Gaps = 2/168 (1%)
Query: 96 ARLIALYGKAAMFENARKVFDEMPGR-NCEQTVLSFNALLGACVNSKKFDEVDGLFKDLP 154
L+A + K +E+ KV + M + V ++N + + KK E L +
Sbjct: 214 GHLLAGFYKEEKYEDVGKVLEMMKDKYGIRPGVSTYNIRIQSLCKLKKSAEAKALLDGML 273
Query: 155 HKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRF 214
+ ++P+ V+Y +I F ++G L+ L +M +G + D + TLL F
Sbjct: 274 SR-QMKPNSVTYAHLIHGFCNEGDLEGGKRLFKDMVNRGYQPDSACYFTLLHYLCKGQDF 332
Query: 215 ADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
A +I + + + PN+ + + ++GLA + +A EL+ +++ K
Sbjct: 333 ETALRICKESIGKDWVPNIATMKSLVNGLAGIGKVDEAKELIAKIKEK 380
>gi|15234493|ref|NP_195386.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181418|sp|Q9M065.1|PP352_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g36680, mitochondrial; Flags: Precursor
gi|2464912|emb|CAB16807.1| salt-inducible like protein [Arabidopsis thaliana]
gi|7270616|emb|CAB80334.1| salt-inducible like protein [Arabidopsis thaliana]
gi|17381286|gb|AAL36061.1| C7A10_680/C7A10_680 [Arabidopsis thaliana]
gi|24111267|gb|AAN46757.1| At4g36680/C7A10_680 [Arabidopsis thaliana]
gi|332661286|gb|AEE86686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 412
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 103/352 (29%), Positives = 186/352 (52%), Gaps = 8/352 (2%)
Query: 13 STTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTG-TVQRLANAK 71
+TTA ++G + + KE++ + + + SD ++ TV+RLA +
Sbjct: 22 TTTAPSSGKISVSKAKSTLRKEHDPDKALKIYANVSDHSASPVSSRYAQELTVRRLAKCR 81
Query: 72 RFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFN 131
RF IE ++E K I +E F + LI YG+A+MF +A + F++M ++ +SFN
Sbjct: 82 RFSDIETLIESHKNDPKIKEEPFYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFN 141
Query: 132 ALLGACVNSKKFDEVDGLFKDLPHKLG-IEPDLVSYNTIIKAFVDKGSLDSANTLLYEME 190
ALL AC++SK FD+V LF ++P + I PD +SY +IK++ D G+ + A ++ +M+
Sbjct: 142 ALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQ 201
Query: 191 KKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQT- 249
KG+ + I F T+L Y G A+ +W MV + +YN R+ ++ +K++
Sbjct: 202 GKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRI--MSAQKESP 259
Query: 250 KKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNKAIFKLL 306
++ EL+ EM S + PD ++ L+ + G L+EAK+ Y + C N A F+ L
Sbjct: 260 ERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTL 319
Query: 307 VPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
+ +C + + + K++ + D L+ +V L + + ++AK L+
Sbjct: 320 IFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVVGLVENKKRDDAKGLI 371
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 91/189 (48%), Gaps = 3/189 (1%)
Query: 74 RWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNAL 133
+ IE + + Q + +++ FT L +LY K + E A +++EM + CE ++N
Sbjct: 192 KAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGEL-EVADNLWNEMVKKGCELDNAAYNVR 250
Query: 134 LGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKG 193
+ + + + V L +++ +G++PD +SYN ++ A+ ++G LD A + +E
Sbjct: 251 IMS-AQKESPERVKELIEEM-SSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNN 308
Query: 194 IRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKAL 253
+ TF TL+ + + I++ V M+ P+ + + GL K+ A
Sbjct: 309 CAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVVGLVENKKRDDAK 368
Query: 254 ELVGEMRSK 262
L+ ++ K
Sbjct: 369 GLIRTVKKK 377
>gi|2632061|emb|CAA05629.1| membrane-associated salt-inducible protein like [Arabidopsis
thaliana]
Length = 428
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 103/352 (29%), Positives = 186/352 (52%), Gaps = 8/352 (2%)
Query: 13 STTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTG-TVQRLANAK 71
+TTA ++G + + KE++ + + + SD ++ TV+RLA +
Sbjct: 38 TTTAPSSGKISVSKAKSTLRKEHDPDKALKIYANVSDHSASPVSSRYAQELTVRRLAKCR 97
Query: 72 RFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFN 131
RF IE ++E K I +E F + LI YG+A+MF +A + F++M ++ +SFN
Sbjct: 98 RFSDIETLIESHKNDPKIKEEPFYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFN 157
Query: 132 ALLGACVNSKKFDEVDGLFKDLPHKLG-IEPDLVSYNTIIKAFVDKGSLDSANTLLYEME 190
ALL AC++SK FD+V LF ++P + I PD +SY +IK++ D G+ + A ++ +M+
Sbjct: 158 ALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQ 217
Query: 191 KKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQT- 249
KG+ + I F T+L Y G A+ +W MV + +YN R+ ++ +K++
Sbjct: 218 GKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRI--MSAQKESP 275
Query: 250 KKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNKAIFKLL 306
++ EL+ EM S + PD ++ L+ + G L+EAK+ Y + C N A F+ L
Sbjct: 276 ERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTL 335
Query: 307 VPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
+ +C + + + K++ + D L+ +V L + + ++AK L+
Sbjct: 336 IFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVVGLVENKKRDDAKGLI 387
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 91/189 (48%), Gaps = 3/189 (1%)
Query: 74 RWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNAL 133
+ IE + + Q + +++ FT L +LY K + E A +++EM + CE ++N
Sbjct: 208 KAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGEL-EVADNLWNEMVKKGCELDNAAYNVR 266
Query: 134 LGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKG 193
+ + + + V L +++ +G++PD +SYN ++ A+ ++G LD A + +E
Sbjct: 267 IMS-AQKESPERVKELIEEM-SSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNN 324
Query: 194 IRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKAL 253
+ TF TL+ + + I++ V M+ P+ + + GL K+ A
Sbjct: 325 CAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVVGLVENKKRDDAK 384
Query: 254 ELVGEMRSK 262
L+ ++ K
Sbjct: 385 GLIRTVKKK 393
>gi|21553755|gb|AAM62848.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
Length = 407
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 98/302 (32%), Positives = 171/302 (56%), Gaps = 3/302 (0%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMP 119
++ V+ LA F + +L+ + + + E F A I LY +A M +++ +VF ++
Sbjct: 83 FSAAVENLAEKNHFSAVSNLLDGFIENRHLKSERFAAHAIVLYAQANMLDHSLRVFRDLE 142
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL 179
+TV S NALL AC+ +K + E ++ ++P GIEPDL +YN +IK F + GS
Sbjct: 143 KFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSA 202
Query: 180 DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNAR 239
S+ +++ EME+KGI+ + +F ++ GFY+ + + K+ M V V +YN R
Sbjct: 203 SSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKARGVNIGVSTYNIR 262
Query: 240 LDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGC 296
+ L +K++K+A L+ M S + P+ T+ LI GF NE + EEAK+ + GC
Sbjct: 263 IQSLCKKKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKVMVNRGC 322
Query: 297 GMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKE 356
+ + L+ ++C+ GD + A +LCK + + + + ++ +V+ LAK+ +VEEAKE
Sbjct: 323 KPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKE 382
Query: 357 LV 358
L+
Sbjct: 383 LI 384
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 54/105 (51%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++P+ V+Y+ +I F ++ + A L M +G + D + TL+ G F A
Sbjct: 286 GMKPNTVTYSHLIHGFCNEDDFEEAKKLFKVMVNRGCKPDSECYFTLIYYLCKGGDFETA 345
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
+ + + N P+ + ++GLA + + ++A EL+G+++ K
Sbjct: 346 LSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELIGQVKEK 390
>gi|356555650|ref|XP_003546143.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
mitochondrial-like [Glycine max]
Length = 388
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 103/338 (30%), Positives = 179/338 (52%), Gaps = 7/338 (2%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
S I + E N +R++D + ++ + ++ V +LA A F I L+ K
Sbjct: 32 SAIHLLKSETNPERILDICRAAALTPDSHIDRRAFSLAVSKLAAAHHFAGIRTFLDDLKT 91
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDE-MPGRNCEQTVLSFNALLGACVNSKKFD 144
D+ E F + I LYG+A M ++A + F E +P ++V + N+LL A + +K +
Sbjct: 92 RPDLRNEKFLSHAIVLYGQANMLDHAIRTFTEDLPS---PRSVKTLNSLLFAALLAKNYK 148
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
E+ ++ + P I+P+L +YNT+IKAF + GS S ++L EM+K I ++ T N
Sbjct: 149 ELTRIYLEFPKTYSIQPNLDTYNTVIKAFAESGSTSSVYSVLAEMDKNNIAPNVTTLNNS 208
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
L GFY +F D K+ + M +V P++ +YN R+ L K++ +A L+ M
Sbjct: 209 LSGFYREKKFDDVGKVLKLMEKYSVFPSISTYNVRIQSLCKLKRSSEAKALLEGMVCNGR 268
Query: 265 NPDVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFN 321
P+ ++ LI GF EG+LEEAKR + + G + + LV F+C G+ + A
Sbjct: 269 KPNSVSYACLIHGFCKEGDLEEAKRLFRDMKRRGYLPDGECYFTLVHFLCCGGEFEAALE 328
Query: 322 LCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ K + + + ++ +V+ LA L+V+EAKE+++
Sbjct: 329 VAKECMGKGWVPNFTTMKSLVNGLAGALKVDEAKEVIK 366
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 73/155 (47%), Gaps = 1/155 (0%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
F++ KV M + ++ ++N + + K+ E L + + G +P+ VSY
Sbjct: 218 FDDVGKVLKLMEKYSVFPSISTYNVRIQSLCKLKRSSEAKALLEGMVCN-GRKPNSVSYA 276
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
+I F +G L+ A L +M+++G D + TL+ G F A ++ + +
Sbjct: 277 CLIHGFCKEGDLEEAKRLFRDMKRRGYLPDGECYFTLVHFLCCGGEFEAALEVAKECMGK 336
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
PN + + ++GLA + +A E++ +++ K
Sbjct: 337 GWVPNFTTMKSLVNGLAGALKVDEAKEVIKQIKEK 371
>gi|297849542|ref|XP_002892652.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338494|gb|EFH68911.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 403
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 97/329 (29%), Positives = 173/329 (52%), Gaps = 4/329 (1%)
Query: 34 ENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYK-DISKE 92
ENN R+++ + +S + + I++ V LA K F + ++L+ Q + D E
Sbjct: 52 ENNPNRILEICRSASLTPDYHVDRIIFSVAVVTLAKEKHFVAVSQLLDGFIQNQPDPKSE 111
Query: 93 GFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKD 152
F R I LYG+A M + + + F ++ +TV S NALL AC+ +K + E + ++ +
Sbjct: 112 SFAVRAIILYGRANMLDRSIQTFRDLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLE 171
Query: 153 LPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNG 212
+P GIEPDL +YN +I+ + GS + +++ EME+K ++ +F ++ GFY
Sbjct: 172 MPKMYGIEPDLETYNRMIRVLCESGSTSLSYSIVAEMERKWVKPTASSFGLMIDGFYKEE 231
Query: 213 RFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFY 272
+F D K+ M V V +YN + L K++ +A L+ + S + P+ T+
Sbjct: 232 KFDDVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYS 291
Query: 273 ALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSE 329
LI GF +E NL+EA + SG + + L+ +C+ GD + A LC+ + +
Sbjct: 292 LLIHGFCSEENLDEAMNLFEVMVYSGYKPDSECYFTLIRCLCKGGDFETALILCRESMEK 351
Query: 330 RCLVDQAPLQLVVDRLAKELRVEEAKELV 358
+ + ++ +V+ LA +V+EAKEL+
Sbjct: 352 NWVPSFSIMKWLVNGLASVSKVDEAKELI 380
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 76/184 (41%), Gaps = 2/184 (1%)
Query: 79 ILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACV 138
+ E ++++ + F + Y K F++ RKV M V ++N ++
Sbjct: 205 VAEMERKWVKPTASSFGLMIDGFY-KEEKFDDVRKVMRMMDEFGVHVGVATYNIMIQCLC 263
Query: 139 NSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL 198
KK E L D + P+ V+Y+ +I F + +LD A L M G + D
Sbjct: 264 KRKKSAEAKALI-DGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVYSGYKPDS 322
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
+ TL+ G F A + + N P+ ++GLA + +A EL+ +
Sbjct: 323 ECYFTLIRCLCKGGDFETALILCRESMEKNWVPSFSIMKWLVNGLASVSKVDEAKELIAQ 382
Query: 259 MRSK 262
++ K
Sbjct: 383 VKEK 386
>gi|15221069|ref|NP_172629.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200551|sp|Q9SAB4.1|PPR33_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g11630, mitochondrial; Flags: Precursor
gi|4835794|gb|AAD30260.1|AC007296_21 Strong similarity to gi|3367521 F8K4.8 from Arabidopsis thaliana
BAC gb|AC004392 [Arabidopsis thaliana]
gi|14326576|gb|AAK60332.1|AF385742_1 At1g11630/F25C20_22 [Arabidopsis thaliana]
gi|19548051|gb|AAL87389.1| At1g11630/F25C20_22 [Arabidopsis thaliana]
gi|21593339|gb|AAM65288.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
gi|332190642|gb|AEE28763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 405
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 174/333 (52%), Gaps = 4/333 (1%)
Query: 34 ENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYK-DISKE 92
ENN R+++ + +S + + I++ V LA K F + ++L+ Q + D E
Sbjct: 52 ENNPDRILEICRSTSLSPDYHVDRIIFSVAVVTLAREKHFVAVSQLLDGFIQNQPDPKSE 111
Query: 93 GFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKD 152
F R I LYG+A M + + + F + +TV S NALL AC+ +K + E + ++ +
Sbjct: 112 SFAVRAIILYGRANMLDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLE 171
Query: 153 LPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNG 212
+P GIEPDL +YN +I+ + GS S+ +++ EME+K I+ +F ++ GFY
Sbjct: 172 MPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEE 231
Query: 213 RFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFY 272
+F + K+ M V V +YN + L K++ +A L+ + S + P+ T+
Sbjct: 232 KFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYS 291
Query: 273 ALIKGFVNEGNLEEAKRWYNKSGCGMNKA---IFKLLVPFVCEKGDLDFAFNLCKRTFSE 329
LI GF +E NL+EA + C K + L+ +C+ GD + A LC+ + +
Sbjct: 292 LLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEK 351
Query: 330 RCLVDQAPLQLVVDRLAKELRVEEAKELVELGK 362
+ + ++ +V+ LA +V+EAKEL+ + K
Sbjct: 352 NWVPSFSVMKWLVNGLASRSKVDEAKELIAVVK 384
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 90/214 (42%), Gaps = 7/214 (3%)
Query: 160 EPDLVSYNTIIKAFVDKGS---LDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
+PD S + ++A + G LD + +E+ I + + N LL + +
Sbjct: 105 QPDPKSESFAVRAIILYGRANMLDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKE 164
Query: 217 AEKIWETMVNM-NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
A +++ M M + P++ +YN + L T + +V EM K I P +F +I
Sbjct: 165 ANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMI 224
Query: 276 KGFVNEGNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCL 332
GF E +E + R ++ G + A + +++ +C++ A L S R
Sbjct: 225 DGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMR 284
Query: 333 VDQAPLQLVVDRLAKELRVEEAKELVELGKTNSY 366
+ L++ E ++EA L E+ N Y
Sbjct: 285 PNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGY 318
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 74/184 (40%), Gaps = 2/184 (1%)
Query: 79 ILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACV 138
+ E ++++ + F + Y K F+ RKV M V ++N ++
Sbjct: 205 VAEMERKWIKPTAASFGLMIDGFY-KEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLC 263
Query: 139 NSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL 198
KK E L D + P+ V+Y+ +I F + +LD A L M G + D
Sbjct: 264 KRKKSAEAKALI-DGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDS 322
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
+ TL+ G F A + + N P+ ++GLA + +A EL+
Sbjct: 323 ECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVNGLASRSKVDEAKELIAV 382
Query: 259 MRSK 262
++ K
Sbjct: 383 VKEK 386
>gi|297741760|emb|CBI32989.3| unnamed protein product [Vitis vinifera]
Length = 412
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/258 (32%), Positives = 147/258 (56%), Gaps = 3/258 (1%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
+A M +A + F++M ++TV S NALL +C+ +K + E + +F + P GIE +L
Sbjct: 132 RAGMLNDAVRTFEQMHQLGVDRTVRSLNALLFSCILAKNYKEANRIFLEFPKTYGIELNL 191
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
SYNT++KAF + GS S ++L EM +KG++ + +F LL GFY+ ++ D K+ +
Sbjct: 192 DSYNTVLKAFSESGSSSSGYSILAEMGRKGVKPNATSFGILLAGFYNEEKYEDVGKVLKM 251
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M ++P + +YN R+ L K++ +A L+ + ++ + P+ T+ LI GF EGN
Sbjct: 252 MEEYKMQPGISTYNIRIQSLCKLKKSSEAKALLDGILARRMKPNSETYCHLIHGFCKEGN 311
Query: 284 LEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL 340
L+EAK+ + GC + + LV F+C+ GD + A CK + + + +
Sbjct: 312 LDEAKKLFKDMVNRGCKPDSDCYFTLVYFLCQGGDFESALRFCKECMEKGWFPNISTMTS 371
Query: 341 VVDRLAKELRVEEAKELV 358
+V+ L +VEEA+EL+
Sbjct: 372 LVNGLVSISKVEEARELI 389
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 76/165 (46%), Gaps = 1/165 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+A + +E+ KV M + + ++N + + KK E L + +
Sbjct: 232 LLAGFYNEEKYEDVGKVLKMMEEYKMQPGISTYNIRIQSLCKLKKSSEAKALLDGILAR- 290
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
++P+ +Y +I F +G+LD A L +M +G + D + TL+ G F A
Sbjct: 291 RMKPNSETYCHLIHGFCKEGNLDEAKKLFKDMVNRGCKPDSDCYFTLVYFLCQGGDFESA 350
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
+ + + PN+ + + ++GL + ++A EL+G+++ K
Sbjct: 351 LRFCKECMEKGWFPNISTMTSLVNGLVSISKVEEARELIGQIKEK 395
>gi|413934838|gb|AFW69389.1| hypothetical protein ZEAMMB73_912579 [Zea mays]
Length = 590
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 104/345 (30%), Positives = 168/345 (48%), Gaps = 21/345 (6%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
V+ I E + +RL F+ ++ N + V RLA A+R +EEILE Q+
Sbjct: 182 VLVRIKHERDPERLYQLFRANAHNRLLVENRFAFEDAVARLAGARRNDLVEEILE---QH 238
Query: 87 KDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEV 146
K + + G GK +A + F EM C +T S NA + + ++ FDE
Sbjct: 239 KALPRGG---------GKG----HALRTFQEMGMYGCPRTAKSLNATMKVLLRARMFDEA 285
Query: 147 DGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLL 206
LF++ P K +E D +S NT++K F D G L +A ++ ME+ G+R D+IT+ TL+
Sbjct: 286 LSLFEEGPEKYDVEVDDISCNTVVKMFCDMGDLRAAYRVMQGMERAGLRSDVITYMTLMA 345
Query: 207 GFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINP 266
FY GR + +W M P + +YN R+ L + +A E+ ++ I P
Sbjct: 346 AFYKCGRHEVGDGLWNLMRLRGWVPTLATYNVRIQFLVNRGRGWQANEMARKIYVAGIKP 405
Query: 267 DVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLC 323
D T+ +IKGF G E AK + + GC N +++ +V ++CE+ D D AF LC
Sbjct: 406 DEITYNLIIKGFFMMGEHEMAKTVFGAMHGRGCKPNSKVYQTMVHYLCERRDFDLAFRLC 465
Query: 324 KRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVEL--GKTNSY 366
K + + + ++ L + KE+++L G+ SY
Sbjct: 466 KDSMEKNWFPSVDTINQLLKGLMAISKDRNGKEIMKLVTGRKPSY 510
>gi|413934837|gb|AFW69388.1| hypothetical protein ZEAMMB73_912579 [Zea mays]
Length = 529
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 104/347 (29%), Positives = 168/347 (48%), Gaps = 21/347 (6%)
Query: 31 IYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDIS 90
I E + +RL F+ ++ N + V RLA A+R +EEILE Q+K +
Sbjct: 186 IKHERDPERLYQLFRANAHNRLLVENRFAFEDAVARLAGARRNDLVEEILE---QHKALP 242
Query: 91 KEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLF 150
+ G GK +A + F EM C +T S NA + + ++ FDE LF
Sbjct: 243 RGG---------GKG----HALRTFQEMGMYGCPRTAKSLNATMKVLLRARMFDEALSLF 289
Query: 151 KDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYS 210
++ P K +E D +S NT++K F D G L +A ++ ME+ G+R D+IT+ TL+ FY
Sbjct: 290 EEGPEKYDVEVDDISCNTVVKMFCDMGDLRAAYRVMQGMERAGLRSDVITYMTLMAAFYK 349
Query: 211 NGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
GR + +W M P + +YN R+ L + +A E+ ++ I PD T
Sbjct: 350 CGRHEVGDGLWNLMRLRGWVPTLATYNVRIQFLVNRGRGWQANEMARKIYVAGIKPDEIT 409
Query: 271 FYALIKGFVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTF 327
+ +IKGF G E AK + + GC N +++ +V ++CE+ D D AF LCK +
Sbjct: 410 YNLIIKGFFMMGEHEMAKTVFGAMHGRGCKPNSKVYQTMVHYLCERRDFDLAFRLCKDSM 469
Query: 328 SERCLVDQAPLQLVVDRLAKELRVEEAKELVEL--GKTNSYCRYNLK 372
+ + ++ L + KE+++L G+ SY +K
Sbjct: 470 EKNWFPSVDTINQLLKGLMAISKDRNGKEIMKLVTGRKPSYSYGEMK 516
>gi|225425092|ref|XP_002272104.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
mitochondrial [Vitis vinifera]
gi|297738261|emb|CBI27462.3| unnamed protein product [Vitis vinifera]
Length = 386
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 186/365 (50%), Gaps = 16/365 (4%)
Query: 3 FPSRLLSCSFSTTATATGPKFIGSVIRGIYKENNLKRLVDKFK-KSSDLGRFRTNTGIYT 61
P RLLS + +T + F+ + + E + ++L F +SS+ RFR + +Y
Sbjct: 7 IPRRLLSLARFSTLSDPFTTFLAAK-SAVESEPDPEKLAHIFHHQSSNFARFRRHRPLYQ 65
Query: 62 GTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGR 121
+ +RL+ + R +E +++HQK EGF RLI LY + M ++A + F +M
Sbjct: 66 LSCRRLSRSGRLDLVERLIDHQKTLPHPRTEGFWIRLIMLYSTSGMVDHALRTFHQMVQD 125
Query: 122 NCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDS 181
+ T S A+L +++ D++ +F +P ++G+ P SY+ ++KAF + ++S
Sbjct: 126 RVQLTEKSLCAILTVYLDNDLIDQLHTVFNTMPSEIGVSPGTKSYSLVLKAFCQQKDMES 185
Query: 182 ANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLD 241
A LL++ME D+ ++N LL + NG + ++I + + N + + +YN R+
Sbjct: 186 ARKLLHKMENP----DIGSYNVLLEAYSENGDGVEFDEILKEIKNKGLEHDCTTYNHRIL 241
Query: 242 GLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK-------S 294
K++ +A +L+ EM +K + P+ ++ +I GF G+ E A++ + +
Sbjct: 242 RFCKNKESVRAKKLLDEMVAKGVKPNSASYNMIIHGFCKVGDFESAQKVLGRMLADGYVA 301
Query: 295 GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA 354
C ++ + L + ++G+ D A N+CK + + + +V L + +VE A
Sbjct: 302 PCSIS---YITLFQHMVKEGEFDSALNMCKEIIRRKWVPPFEAMDGLVKGLVEISKVEAA 358
Query: 355 KELVE 359
KE+VE
Sbjct: 359 KEVVE 363
>gi|224113615|ref|XP_002316521.1| predicted protein [Populus trichocarpa]
gi|222859586|gb|EEE97133.1| predicted protein [Populus trichocarpa]
Length = 401
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/310 (31%), Positives = 171/310 (55%), Gaps = 11/310 (3%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYK-DISKEGFTARLIALYGKAAMFENARKVFDEM 118
++ + +LA + F +I++ L + + D+ F A I LYG+A M + A ++F E
Sbjct: 69 FSVAIDKLAKSNNFSYIDDFLTDLRTSRPDLRTVRFAAHSIILYGQAGMIDQAIRLFKEY 128
Query: 119 PGRNCEQTVLS------FNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKA 172
+N VL+ NALL +C+ +KK+DEV+ +F D + IEP+L ++NT+I++
Sbjct: 129 HEKNQNDVVLTSGSVKLLNALLFSCILAKKYDEVNRVFVDFSKRYKIEPNLETFNTVIQS 188
Query: 173 FVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM-VNMNVRP 231
F + GS S ++L EM+ KG++ + TF L GFY ++ D + + + + +
Sbjct: 189 FCESGSSSSCYSVLNEMDMKGVKPNETTFGHLFAGFYREEKYEDVGTVSKMIEEDYGISA 248
Query: 232 NVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY 291
+ YN R+ L K+ ++A L+ SK I P+ T+ LI GF EG+LEEAKR +
Sbjct: 249 GIGVYNIRIHSLCKLKRAREANVLLEGCLSKGITPNGVTYSHLILGFCMEGDLEEAKRLF 308
Query: 292 NK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKE 348
GC + + LV F+ + GD + A+ +CK + ++ + + + ++++V LA
Sbjct: 309 KSMENRGCQPAYSCYATLVYFLGKGGDFESAYRVCKESMGKKMVPNFSTMKILVQGLASS 368
Query: 349 LRVEEAKELV 358
V++AKEL+
Sbjct: 369 GEVDKAKELI 378
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 52/105 (49%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
GI P+ V+Y+ +I F +G L+ A L ME +G + + TL+ G F A
Sbjct: 280 GITPNGVTYSHLILGFCMEGDLEEAKRLFKSMENRGCQPAYSCYATLVYFLGKGGDFESA 339
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
++ + + + PN + + GLA + KA EL+GE++ +
Sbjct: 340 YRVCKESMGKKMVPNFSTMKILVQGLASSGEVDKAKELIGEVKER 384
>gi|359492929|ref|XP_002283907.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Vitis vinifera]
Length = 513
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/362 (28%), Positives = 185/362 (51%), Gaps = 16/362 (4%)
Query: 13 STTATAT------GPKFIG--SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTV 64
+T AT T PKFI S I I +E + +R ++ F + ++ F N Y +
Sbjct: 41 ATEATTTMVEPRKKPKFISHESAINLIKRETDPQRALEIFNRVAEQRGFSHNNATYATIL 100
Query: 65 QRLANAKRFRWIEEILEHQKQYKDIS-KEGFTARLIALYGKAAMFENARKVFDEM-PGRN 122
+LA +K+F+ I+ +L HQ Y+ EG L+ + K ++ E ++FD + P
Sbjct: 101 HKLAKSKKFQAIDAVL-HQMTYETCKFHEGIFLNLMKHFSKLSLHERVVEMFDAIRPIVR 159
Query: 123 CEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSA 182
+ ++ + + L V S + D + L +EP+ +N ++K G +DSA
Sbjct: 160 EKPSLKAISTCLNLLVESNQVDLTRKFLLNSKKSLNLEPNTCIFNILVKHHCKNGDIDSA 219
Query: 183 NTLLYEMEKKGIRL-DLITFNTLLLGFYSNGRFADAEKIWETMVNMN-VRPNVRSYNARL 240
++ EM+K + +LIT++TL+ G +GR +A +++E MV+ + + P+ +YNA +
Sbjct: 220 FEVVEEMKKSHVSYPNLITYSTLINGLCGSGRLKEAIELFEEMVSKDQILPDALTYNALI 279
Query: 241 DGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS---GCG 297
+G ++ +AL+++ M+ NP+VF + AL+ GF EG LEEAK +++ G
Sbjct: 280 NGFCHGEKVDRALKIMEFMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMKSLGLK 339
Query: 298 MNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
+ + L+ F C G +D A L K +C D +++ L +E R EEA+ +
Sbjct: 340 PDTVGYTTLINFFCRAGRVDEAMELLKDMRENKCRADTVTFNVILGGLCREGRFEEARGM 399
Query: 358 VE 359
+E
Sbjct: 400 LE 401
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 117/229 (51%), Gaps = 4/229 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCE-QTVLSFNALLGACVNSKKFDEVDGLFKDLPHK 156
L+ + K ++A +V +EM + +++++ L+ S + E LF+++ K
Sbjct: 206 LVKHHCKNGDIDSAFEVVEEMKKSHVSYPNLITYSTLINGLCGSGRLKEAIELFEEMVSK 265
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
I PD ++YN +I F +D A ++ M+K G ++ ++ L+ GF GR +
Sbjct: 266 DQILPDALTYNALINGFCHGEKVDRALKIMEFMKKNGCNPNVFNYSALMNGFCKEGRLEE 325
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
A+++++ M ++ ++P+ Y ++ + +A+EL+ +MR + D TF ++
Sbjct: 326 AKEVFDEMKSLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMRENKCRADTVTFNVILG 385
Query: 277 GFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
G EG EEA+ + G +NKA +++++ +C +G+L A L
Sbjct: 386 GLCREGRFEEARGMLERLPYEGVYLNKASYRIVLNSLCREGELQKATQL 434
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 119/275 (43%), Gaps = 13/275 (4%)
Query: 56 NTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTAR-LIALYGKAAMFENARKV 114
N Y+ + L + R + E+ E I + T LI + + A K+
Sbjct: 235 NLITYSTLINGLCGSGRLKEAIELFEEMVSKDQILPDALTYNALINGFCHGEKVDRALKI 294
Query: 115 FDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFV 174
+ M C V +++AL+ + +E +F ++ LG++PD V Y T+I F
Sbjct: 295 MEFMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEM-KSLGLKPDTVGYTTLINFFC 353
Query: 175 DKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVR 234
G +D A LL +M + R D +TFN +L G GRF +A + E + V N
Sbjct: 354 RAGRVDEAMELLKDMRENKCRADTVTFNVILGGLCREGRFEEARGMLERLPYEGVYLNKA 413
Query: 235 SYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS 294
SY L+ L E + +KA +LVG M + + P T L+ G + +A +
Sbjct: 414 SYRIVLNSLCREGELQKATQLVGLMLGRGVLPHFATSNELLVHLCEAGKVGDAVM----A 469
Query: 295 GCGMNKAIFK-------LLVPFVCEKGDLDFAFNL 322
G+ + FK LLV +C + L AF L
Sbjct: 470 LLGLLELGFKPEPNSWALLVELICRERKLLPAFEL 504
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 81/171 (47%), Gaps = 2/171 (1%)
Query: 93 GFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKD 152
G+T LI + +A + A ++ +M C ++FN +LG +F+E G+ +
Sbjct: 344 GYTT-LINFFCRAGRVDEAMELLKDMRENKCRADTVTFNVILGGLCREGRFEEARGMLER 402
Query: 153 LPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNG 212
LP++ G+ + SY ++ + +G L A L+ M +G+ T N LL+ G
Sbjct: 403 LPYE-GVYLNKASYRIVLNSLCREGELQKATQLVGLMLGRGVLPHFATSNELLVHLCEAG 461
Query: 213 RFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
+ DA ++ + +P S+ ++ + E++ A EL+ ++ +E
Sbjct: 462 KVGDAVMALLGLLELGFKPEPNSWALLVELICRERKLLPAFELLDDLVIQE 512
>gi|449438040|ref|XP_004136798.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
mitochondrial-like [Cucumis sativus]
gi|449494815|ref|XP_004159654.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
mitochondrial-like [Cucumis sativus]
Length = 405
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/367 (27%), Positives = 187/367 (50%), Gaps = 12/367 (3%)
Query: 5 SRLLSCSFSTTA----TATGP-KFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGI 59
SRL S S+STT T+ P + + I +++ +L F ++S L F I
Sbjct: 16 SRLHSFSYSTTPPLQPTSDSPFPSLRAAKSAILSQSDPDKLAQSFIQASTLPSFCRYRPI 75
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDE-M 118
Y ++++LA A+RF I+ I++ + + EGF RLI LY M A + D+ +
Sbjct: 76 YHQSIRKLARAQRFDLIDVIIQSHHKSPSATSEGFWIRLIMLYSSVGMVNQALYILDQAI 135
Query: 119 PGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGS 178
++C + S A+L +++ ++V +F+ +P K+G+ P VS+N ++KAFV +
Sbjct: 136 LHKSCNLSEKSLCAILSVFLDNSMPEKVHEMFRSIPEKIGVTPTAVSHNLVLKAFVRQND 195
Query: 179 LDSANTLLYEMEKKGIRL--DLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSY 236
L SA + E+ K ++ ++ +F LL ++SNG ++I + + + N+ +Y
Sbjct: 196 LPSARNWIDELCKDDAKVIPNIDSFTILLGAYWSNGDMIGFDEIEKEISKRGLEFNLATY 255
Query: 237 NARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA----KRWYN 292
N R+ L K+ +A +++ EM SK + P+ ++ ++I G+ + G++E A K
Sbjct: 256 NYRISRLCKNKECARAKKILDEMISKGVKPNSSSYDSIIHGYCDVGDIESAMKILKGILE 315
Query: 293 KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVE 352
I+ L+ + ++G+ + A C+ T R + ++ +V L +VE
Sbjct: 316 DGHVSPTSRIYYRLIRSMVKEGEFEMALETCRETIKRRWVPPFEAMEALVRGLVAMSKVE 375
Query: 353 EAKELVE 359
EAKE+VE
Sbjct: 376 EAKEVVE 382
>gi|226490900|ref|NP_001141371.1| uncharacterized protein LOC100273462 [Zea mays]
gi|194704218|gb|ACF86193.1| unknown [Zea mays]
gi|414880165|tpg|DAA57296.1| TPA: hypothetical protein ZEAMMB73_527047 [Zea mays]
Length = 393
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 148/280 (52%), Gaps = 13/280 (4%)
Query: 87 KDISKEGFTAR----LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKK 142
+D++ T R IAL+G+A + +A F P + S NAL+ AC+ S
Sbjct: 98 RDLASTVLTPRHAPHAIALFGQAHLLPDAISTFQSSP------STRSLNALIFACIVSGN 151
Query: 143 FDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFN 202
E +F+ P G++P+ ++N IIK+F + G++ S ++ EM KKG++ + ITF
Sbjct: 152 HTEAARVFQTFPDAHGVKPNTETFNAIIKSFAESGTIRSFYSVFDEMCKKGLKPNSITFT 211
Query: 203 TLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
T L GFY +F D +K+ E M ++ YN R+ L ++ +A LV EM K
Sbjct: 212 TALAGFYKEEKFDDIKKVLELMKKNGCGESLPVYNVRVQSLCKLGRSGEARALVDEMMKK 271
Query: 263 EINPDVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFA 319
P+ T+ LI GF EG+LEEAKR Y + G + + +L+ ++C+ DLD A
Sbjct: 272 GTKPNWVTYNHLIYGFCKEGDLEEAKRLYKEMGRKGLVGDSDFYFMLIYYLCKGDDLDTA 331
Query: 320 FNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
L ++ + + ++++V+ LA R++EAK ++E
Sbjct: 332 LGLYNEIAAKNWVPCFSTMKMLVNGLAGSSRIDEAKGIIE 371
>gi|195620494|gb|ACG32077.1| membrane-associated salt-inducible protein [Zea mays]
Length = 393
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 148/280 (52%), Gaps = 13/280 (4%)
Query: 87 KDISKEGFTAR----LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKK 142
+D++ T R IAL+G+A + +A F P + S NAL+ AC+ S
Sbjct: 98 RDLASTVLTPRHAPHAIALFGQAHLLPDAISTFQSSP------STRSLNALIFACIVSGN 151
Query: 143 FDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFN 202
E +F+ P G++P+ ++N IIK+F + G++ S ++ EM KKG++ + ITF
Sbjct: 152 HTEXARVFQTFPDAHGVKPNTETFNAIIKSFAESGTIRSFYSVFDEMCKKGLKPNSITFT 211
Query: 203 TLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
T L GFY +F D +K+ E M ++ YN R+ L ++ +A LV EM K
Sbjct: 212 TALAGFYKEEKFDDIKKVLELMKKNGCGESLPVYNVRVQSLCKLGRSGEARALVDEMMKK 271
Query: 263 EINPDVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFA 319
P+ T+ LI GF EG+LEEAKR Y + G + + +L+ ++C+ DLD A
Sbjct: 272 GTKPNWVTYNHLIYGFCKEGDLEEAKRLYKEMGRKGLVGDSDFYFMLIYYLCKGDDLDTA 331
Query: 320 FNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
L ++ + + ++++V+ LA R++EAK ++E
Sbjct: 332 LGLYNEIAAKNWVPCFSTMKMLVNGLAGSSRIDEAKGIIE 371
>gi|125528002|gb|EAY76116.1| hypothetical protein OsI_04043 [Oryza sativa Indica Group]
Length = 390
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/264 (32%), Positives = 138/264 (52%), Gaps = 9/264 (3%)
Query: 99 IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLG 158
IAL+G+A + +A F P + S NALL AC+ S E +F+ P
Sbjct: 111 IALFGQAGLLPDAVSTFKSSP------STRSLNALLFACLVSGNHAEAARVFQTFPDAYS 164
Query: 159 IEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAE 218
++P+ ++N IIK+F + G+ S ++L EM KKG++ + TF T + GFY RF D
Sbjct: 165 VKPNTDTFNAIIKSFAESGTTRSFYSVLDEMCKKGVKPNATTFTTAIAGFYKEERFDDVG 224
Query: 219 KIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGF 278
K+ E M ++ +N R+ GL ++ A L+ EM K P T+ LI GF
Sbjct: 225 KVIELMKKHGCGESLPVFNVRVQGLCKLGRSGDAKALLNEMVKKGTKPSWLTYNHLIHGF 284
Query: 279 VNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQ 335
EG+LEEAKR Y K G + + + +L+ ++C+ GD D A + + +
Sbjct: 285 CKEGDLEEAKRLYKEMAKKGLVGDSSFYYMLIYYLCKGGDFDTAVGVYNEIAARNWVPCF 344
Query: 336 APLQLVVDRLAKELRVEEAKELVE 359
+ ++++V+ LA RV+EAK ++E
Sbjct: 345 STMKMLVNGLAGSSRVDEAKGIIE 368
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 105/257 (40%), Gaps = 3/257 (1%)
Query: 7 LLSCSFSTTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQR 66
LL + ST ++ + + +++ N F+ D + NT + ++
Sbjct: 119 LLPDAVSTFKSSPSTRSLNALLFACLVSGNHAEAARVFQTFPDAYSVKPNTDTFNAIIKS 178
Query: 67 LANAKRFRWIEEILEHQ-KQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQ 125
A + R +L+ K+ + FT + Y K F++ KV + M C +
Sbjct: 179 FAESGTTRSFYSVLDEMCKKGVKPNATTFTTAIAGFY-KEERFDDVGKVIELMKKHGCGE 237
Query: 126 TVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTL 185
++ FN + + + L ++ K G +P ++YN +I F +G L+ A L
Sbjct: 238 SLPVFNVRVQGLCKLGRSGDAKALLNEMVKK-GTKPSWLTYNHLIHGFCKEGDLEEAKRL 296
Query: 186 LYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAI 245
EM KKG+ D + L+ G F A ++ + N P + ++GLA
Sbjct: 297 YKEMAKKGLVGDSSFYYMLIYYLCKGGDFDTAVGVYNEIAARNWVPCFSTMKMLVNGLAG 356
Query: 246 EKQTKKALELVGEMRSK 262
+ +A ++ +M+ K
Sbjct: 357 SSRVDEAKGIIEKMKEK 373
>gi|357125390|ref|XP_003564377.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g61870, mitochondrial-like [Brachypodium
distachyon]
Length = 390
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 140/264 (53%), Gaps = 9/264 (3%)
Query: 99 IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLG 158
IAL+G+A + +A F P + S NALL AC+ + E +F+ P
Sbjct: 111 IALFGQAGLLPDAISTFQSSP------STRSLNALLFACLVAGNHAEAARIFQTFPDAHN 164
Query: 159 IEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAE 218
++P+ ++N IIK+F + G+ S ++ EM KKG++ + TF T + GFY +F D E
Sbjct: 165 VKPNTETFNAIIKSFSESGTTRSFYSVFDEMCKKGVKPNATTFTTAIAGFYKEEQFGDVE 224
Query: 219 KIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGF 278
K+ E M +++ YNAR+ GL ++ +A L+ EM + P T+ LI GF
Sbjct: 225 KVIELMKKHGCGESLQVYNARVQGLCKLGRSGEAKALLNEMVKRGTKPSWVTYNHLIYGF 284
Query: 279 VNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQ 335
EG+LEE KR Y K G + + + L+ ++C+ GD D A + T + +
Sbjct: 285 CKEGDLEEVKRLYKEMGKKGLVGDSSFYFTLIFYLCKAGDFDSALGVYNETTARSWVPCF 344
Query: 336 APLQLVVDRLAKELRVEEAKELVE 359
+ ++++V+ LA +V+EAK ++E
Sbjct: 345 STMKMLVNGLAGSSKVDEAKGIIE 368
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 103/257 (40%), Gaps = 3/257 (1%)
Query: 7 LLSCSFSTTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQR 66
LL + ST ++ + + +++ N F+ D + NT + ++
Sbjct: 119 LLPDAISTFQSSPSTRSLNALLFACLVAGNHAEAARIFQTFPDAHNVKPNTETFNAIIKS 178
Query: 67 LANAKRFRWIEEILEHQ-KQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQ 125
+ + R + + K+ + FT + Y K F + KV + M C +
Sbjct: 179 FSESGTTRSFYSVFDEMCKKGVKPNATTFTTAIAGFY-KEEQFGDVEKVIELMKKHGCGE 237
Query: 126 TVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTL 185
++ +NA + + E L ++ K G +P V+YN +I F +G L+ L
Sbjct: 238 SLQVYNARVQGLCKLGRSGEAKALLNEMV-KRGTKPSWVTYNHLIYGFCKEGDLEEVKRL 296
Query: 186 LYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAI 245
EM KKG+ D + TL+ G F A ++ + P + ++GLA
Sbjct: 297 YKEMGKKGLVGDSSFYFTLIFYLCKAGDFDSALGVYNETTARSWVPCFSTMKMLVNGLAG 356
Query: 246 EKQTKKALELVGEMRSK 262
+ +A ++ +M+ K
Sbjct: 357 SSKVDEAKGIIEKMKEK 373
>gi|20146263|dbj|BAB89045.1| putative drought-inducible protein 1OS [Oryza sativa Japonica
Group]
gi|20160842|dbj|BAB89782.1| putative drought-inducible protein 1OS [Oryza sativa Japonica
Group]
gi|215700983|dbj|BAG92407.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 390
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 85/264 (32%), Positives = 138/264 (52%), Gaps = 9/264 (3%)
Query: 99 IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLG 158
IAL+G+A + +A F P + S NALL AC+ S E +F+ P
Sbjct: 111 IALFGQAGLLPDAVSTFKSSP------STRSLNALLFACLVSGNHAEAARVFQTFPDAYS 164
Query: 159 IEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAE 218
++P+ ++N IIK+F + G+ S ++L EM +KG++ + TF T + GFY RF D
Sbjct: 165 VKPNTDTFNAIIKSFAESGTTRSFYSVLDEMCQKGVKPNATTFTTAIAGFYKEERFDDVG 224
Query: 219 KIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGF 278
K+ E M ++ +N R+ GL ++ A L+ EM K P T+ LI GF
Sbjct: 225 KVIELMKKHGCGESLPVFNVRVQGLCKLGRSGDAKALLNEMVKKGTKPSWLTYNHLIHGF 284
Query: 279 VNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQ 335
EG+LEEAKR Y K G + + + +L+ ++C+ GD D A + + +
Sbjct: 285 CKEGDLEEAKRLYKEMAKKGLVGDSSFYYMLIYYLCKGGDFDTAVGVYNEIAARNWVPCF 344
Query: 336 APLQLVVDRLAKELRVEEAKELVE 359
+ ++++V+ LA RV+EAK ++E
Sbjct: 345 STMKMLVNGLAGSSRVDEAKGIIE 368
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 106/258 (41%), Gaps = 5/258 (1%)
Query: 7 LLSCSFSTTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQR 66
LL + ST ++ + + +++ N F+ D + NT + ++
Sbjct: 119 LLPDAVSTFKSSPSTRSLNALLFACLVSGNHAEAARVFQTFPDAYSVKPNTDTFNAIIKS 178
Query: 67 LANAKRFRWIEEILEH--QKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCE 124
A + R +L+ QK K + FT + Y K F++ KV + M C
Sbjct: 179 FAESGTTRSFYSVLDEMCQKGVKP-NATTFTTAIAGFY-KEERFDDVGKVIELMKKHGCG 236
Query: 125 QTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANT 184
+++ FN + + + L ++ K G +P ++YN +I F +G L+ A
Sbjct: 237 ESLPVFNVRVQGLCKLGRSGDAKALLNEMVKK-GTKPSWLTYNHLIHGFCKEGDLEEAKR 295
Query: 185 LLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLA 244
L EM KKG+ D + L+ G F A ++ + N P + ++GLA
Sbjct: 296 LYKEMAKKGLVGDSSFYYMLIYYLCKGGDFDTAVGVYNEIAARNWVPCFSTMKMLVNGLA 355
Query: 245 IEKQTKKALELVGEMRSK 262
+ +A ++ +M+ K
Sbjct: 356 GSSRVDEAKGIIEKMKEK 373
>gi|86438766|emb|CAJ75625.1| pentatricopeptide repeat-containing protein [Brachypodium
sylvaticum]
Length = 289
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 77/194 (39%), Positives = 110/194 (56%)
Query: 31 IYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDIS 90
I E N KRL + F+ ++ N + V RL+ A+R +EEILE K
Sbjct: 88 IKNERNPKRLYELFRANAHNRLLVENRFAFQDAVARLSGARRNDLVEEILEQHKALPQGR 147
Query: 91 KEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLF 150
+EGF R+I LYGKA M E+A + F EM C T SFNA L + ++ FD+ LF
Sbjct: 148 REGFVVRIIGLYGKARMPEHALRTFQEMEMYGCTCTNKSFNATLKVLMQAQLFDKALQLF 207
Query: 151 KDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYS 210
++ P K G+E D +SYNT++K D G L +A ++ EMEK+GI+ D+IT+ TL+ FY
Sbjct: 208 EEGPGKYGVELDDISYNTVVKMMCDMGQLRAAYRVMQEMEKEGIQPDVITYTTLMAAFYK 267
Query: 211 NGRFADAEKIWETM 224
NG+ + +W M
Sbjct: 268 NGQREVGDGLWNLM 281
>gi|227463008|gb|ACP39956.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227463010|gb|ACP39957.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 337
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 85/258 (32%), Positives = 136/258 (52%)
Query: 34 ENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEG 93
E N R+++ + +S F + ++ + +L+ F+ I+ L D+ E
Sbjct: 48 EQNPDRILNICRAASLTPTFHLDRIAFSVAISKLSEGNHFQSIDTFLRELNSRPDLQHER 107
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
F + + LYG+A M +A FDE + ++ S NALL A + +K + E +F +
Sbjct: 108 FVSHSLILYGQAKMLNHALTTFDEFYNKGYCRSTKSLNALLVAAILAKDYKEAKRIFVEF 167
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
P + GIEP+L +YNT IKA + GS S ++L +M+ KGI+ + TF TLL GFY+ +
Sbjct: 168 PKRYGIEPNLETYNTAIKALCESGSSSSVYSILVDMKSKGIKPNATTFGTLLAGFYAEEK 227
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
+ D K+ M V V +YN R+ L + K++ +A L+ M SK I P+ T+
Sbjct: 228 YEDVGKVLNLMKEHGVSVGVSTYNIRIRSLCMLKKSNEAKALLDGMLSKGIMPNSATYNH 287
Query: 274 LIKGFVNEGNLEEAKRWY 291
LI G GNL EAK+ +
Sbjct: 288 LIYGXCRGGNLGEAKKVF 305
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 39/189 (20%), Positives = 82/189 (43%), Gaps = 7/189 (3%)
Query: 128 LSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPD-LVSYNTIIKAFVDKGSLDSANTLL 186
++F+ + F +D ++L + ++ + VS++ I+ + L+ A T
Sbjct: 72 IAFSVAISKLSEGNHFQSIDTFLRELNSRPDLQHERFVSHSLIL--YGQAKMLNHALTTF 129
Query: 187 YEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW-ETMVNMNVRPNVRSYNARLDGLAI 245
E KG + N LL+ + +A++I+ E + PN+ +YN + L
Sbjct: 130 DEFYNKGYCRSTKSLNALLVAAILAKDYKEAKRIFVEFPKRYGIEPNLETYNTAIKALCE 189
Query: 246 EKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAI 302
+ ++ +M+SK I P+ TF L+ GF E E+ + N + G + +
Sbjct: 190 SGSSSSVYSILVDMKSKGIKPNATTFGTLLAGFYAEEKYEDVGKVLNLMKEHGVSVGVST 249
Query: 303 FKLLVPFVC 311
+ + + +C
Sbjct: 250 YNIRIRSLC 258
>gi|242054647|ref|XP_002456469.1| hypothetical protein SORBIDRAFT_03g036880 [Sorghum bicolor]
gi|241928444|gb|EES01589.1| hypothetical protein SORBIDRAFT_03g036880 [Sorghum bicolor]
Length = 392
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 145/280 (51%), Gaps = 13/280 (4%)
Query: 87 KDISKEGFTAR----LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKK 142
+D++ T R I L+G+A + +A F P + S NAL+ AC+ S
Sbjct: 97 RDLASTVLTPRHAPHAIVLFGQANLLPDAISTFQSSP------STRSLNALIFACIVSGN 150
Query: 143 FDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFN 202
E +F+ P G++P+ ++N IIK+F + G++ S ++ EM KKG++ + TF
Sbjct: 151 HTEAARVFQTFPDAHGVKPNTETFNAIIKSFAESGTIRSFYSVFDEMCKKGLKPNATTFT 210
Query: 203 TLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
T L GFY RF D K+ E M ++ YN R+ L ++ +A LV EM K
Sbjct: 211 TALAGFYKEERFDDVGKVLELMKKNGCGESLPVYNVRVQSLCKLGRSGEARALVDEMVKK 270
Query: 263 EINPDVFTFYALIKGFVNEGNLEEAKRWYNKSG-CGMNKAI--FKLLVPFVCEKGDLDFA 319
P T+ LI GF EG+LEEAKR Y + G G+ I + +L+ ++C+ D D A
Sbjct: 271 GTKPSWVTYNHLIYGFCKEGDLEEAKRLYKEMGRKGLVGDINFYFMLIHYLCKGDDFDTA 330
Query: 320 FNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ ++ + + ++++V+ LA R++EAK ++E
Sbjct: 331 LGVYNEIAAKNWVPCFSTMKMLVNGLAGSSRIDEAKGIIE 370
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 109/260 (41%), Gaps = 5/260 (1%)
Query: 5 SRLLSCSFSTTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTV 64
+ LL + ST ++ + + ++I N F+ D + NT + +
Sbjct: 119 ANLLPDAISTFQSSPSTRSLNALIFACIVSGNHTEAARVFQTFPDAHGVKPNTETFNAII 178
Query: 65 QRLANAKRFRWIEEILEHQ-KQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNC 123
+ A + R + + K+ + FT L Y K F++ KV + M C
Sbjct: 179 KSFAESGTIRSFYSVFDEMCKKGLKPNATTFTTALAGFY-KEERFDDVGKVLELMKKNGC 237
Query: 124 EQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSAN 183
+++ +N + + + E L ++ K G +P V+YN +I F +G L+ A
Sbjct: 238 GESLPVYNVRVQSLCKLGRSGEARALVDEMVKK-GTKPSWVTYNHLIYGFCKEGDLEEAK 296
Query: 184 TLLYEMEKKGIRLDLITFNTLLLGFYSNG-RFADAEKIWETMVNMNVRPNVRSYNARLDG 242
L EM +KG+ D I F +L+ + G F A ++ + N P + ++G
Sbjct: 297 RLYKEMGRKGLVGD-INFYFMLIHYLCKGDDFDTALGVYNEIAAKNWVPCFSTMKMLVNG 355
Query: 243 LAIEKQTKKALELVGEMRSK 262
LA + +A ++ +M+ K
Sbjct: 356 LAGSSRIDEAKGIIEKMKEK 375
>gi|156070774|gb|ABU45188.1| unknown [Capsicum frutescens]
Length = 373
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 151/299 (50%), Gaps = 24/299 (8%)
Query: 63 TVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRN 122
TV+RLA + RF E LE K I++E F + +I YG A MF++A K+ +M
Sbjct: 54 TVKRLAKSHRFSDSENFLESHKNSSKITQEPFLSSIIRSYGVAGMFDHALKICHQMDHLG 113
Query: 123 CEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSA 182
++ +SFN LL ACV+SK +D V LF ++P + +IK +
Sbjct: 114 TPRSAISFNVLLSACVHSKLYDRVAQLFDEMPVSMDF--------YLIKCPMG------- 158
Query: 183 NTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDG 242
L EM++K + + + F T+L FY G+ +AE++W MVN P+V +YN ++
Sbjct: 159 ---LKEMDEKDVEITTVAFTTILHSFYKKGKSDEAERVWNEMVNKGCGPDVGAYNVKI-- 213
Query: 243 LAIEKQTKKALE-LVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGM 298
+ I+ + ++ L+ EM + PD ++ L+ + + E ++ Y +GC
Sbjct: 214 MNIQGGDPEGVKALIEEMSDAGLKPDTISYNYLMTCYFRNELMNEVQKVYEDLEANGCNP 273
Query: 299 NKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
N A F+ L+ ++ +KG + + + K + + D L+ +V+ L K ++ EAK +
Sbjct: 274 NAATFRTLIFYLSKKGKYEAGYKVFKESVRVNKIPDFNTLEYLVEGLVKRSKLNEAKRM 332
>gi|224078640|ref|XP_002305587.1| predicted protein [Populus trichocarpa]
gi|222848551|gb|EEE86098.1| predicted protein [Populus trichocarpa]
Length = 359
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 174/355 (49%), Gaps = 51/355 (14%)
Query: 12 FSTTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAK 71
FST+ ++ K ++ R + E N +++++ + +S + ++ + +LA +
Sbjct: 25 FSTSPLSSISKTRVALSR-LKTETNPEKILEICRSASLTPEANIDRITFSVAIDKLAKSN 83
Query: 72 RFRWIEEIL-EHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLS- 129
F +I+E+L E + D+ E F A I L+GKA M ++A ++F E +N VLS
Sbjct: 84 NFSYIDELLTELRTSRPDLRTEQFAAHSIVLFGKAGMIDHAIRLFKEYHEKNQNGVVLSS 143
Query: 130 -----FNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANT 184
N+LL +C+ +KK++EV +F D IEP+L +YNTII+AF + GS S +
Sbjct: 144 GSVKLLNSLLYSCILAKKYNEVKRVFVDFTKSFKIEPNLDTYNTIIQAFSEGGSSSSCYS 203
Query: 185 LLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM-VNMNVRPNVRSYNARLDGL 243
+L EM+KKG++ + T L+ GFY ++ D K+ + M + + + YN R+ L
Sbjct: 204 ILNEMDKKGVKPNTTTIGNLITGFYKEEKYEDVGKVLKMMEEDYGTKAGIDIYNIRIRSL 263
Query: 244 AIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKAIF 303
K++K+A L+G ++ + P T+
Sbjct: 264 CKLKRSKEAEALLGGCIARGVKPKAVTYR------------------------------- 292
Query: 304 KLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
D + A+ +CK + ++ + + + ++++V+ LA VE+AKEL+
Sbjct: 293 -----------DFESAYRICKESMEKKLVPNSSTMKMLVEGLASSGNVEKAKELI 336
>gi|125572292|gb|EAZ13807.1| hypothetical protein OsJ_03733 [Oryza sativa Japonica Group]
Length = 351
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 133/259 (51%), Gaps = 9/259 (3%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
+A + +A F P + S NALL AC+ S E +F+ P ++P+
Sbjct: 77 RAGLLPDAVSTFKSSP------STRSLNALLFACLVSGNHAEAARVFQTFPDAYSVKPNT 130
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
++N IIK+F + G+ S ++L EM +KG++ + TF T + GFY RF D K+ E
Sbjct: 131 DTFNAIIKSFAESGTTRSFYSVLDEMCQKGVKPNATTFTTAIAGFYKEERFDDVGKVIEL 190
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M ++ +N R+ GL ++ A L+ EM K P T+ LI GF EG+
Sbjct: 191 MKKHGCGESLPVFNVRVQGLCKLGRSGDAKALLNEMVKKGTKPSWLTYNHLIHGFCKEGD 250
Query: 284 LEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL 340
LEEAKR Y K G + + + +L+ ++C+ GD D A + + + + +++
Sbjct: 251 LEEAKRLYKEMAKKGLVGDSSFYYMLIYYLCKGGDFDTAVGVYNEIAARNWVPCFSTMKM 310
Query: 341 VVDRLAKELRVEEAKELVE 359
+V+ LA RV+EAK ++E
Sbjct: 311 LVNGLAGSSRVDEAKGIIE 329
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 106/258 (41%), Gaps = 5/258 (1%)
Query: 7 LLSCSFSTTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQR 66
LL + ST ++ + + +++ N F+ D + NT + ++
Sbjct: 80 LLPDAVSTFKSSPSTRSLNALLFACLVSGNHAEAARVFQTFPDAYSVKPNTDTFNAIIKS 139
Query: 67 LANAKRFRWIEEILEH--QKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCE 124
A + R +L+ QK K + FT + Y K F++ KV + M C
Sbjct: 140 FAESGTTRSFYSVLDEMCQKGVKP-NATTFTTAIAGFY-KEERFDDVGKVIELMKKHGCG 197
Query: 125 QTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANT 184
+++ FN + + + L ++ K G +P ++YN +I F +G L+ A
Sbjct: 198 ESLPVFNVRVQGLCKLGRSGDAKALLNEMVKK-GTKPSWLTYNHLIHGFCKEGDLEEAKR 256
Query: 185 LLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLA 244
L EM KKG+ D + L+ G F A ++ + N P + ++GLA
Sbjct: 257 LYKEMAKKGLVGDSSFYYMLIYYLCKGGDFDTAVGVYNEIAARNWVPCFSTMKMLVNGLA 316
Query: 245 IEKQTKKALELVGEMRSK 262
+ +A ++ +M+ K
Sbjct: 317 GSSRVDEAKGIIEKMKEK 334
>gi|255576901|ref|XP_002529336.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531207|gb|EEF33053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 610
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 152/312 (48%), Gaps = 7/312 (2%)
Query: 53 FRTNTGIYTGTVQRLANAKRFRWIEEIL-EHQKQYKDISKEGFTARLIALYGKAAMFENA 111
FR + Y + +L AK F +E+IL + + Q + ++KE +I YG+A + +NA
Sbjct: 43 FRYSLLCYDLMITKLGRAKMFHEMEQILLQFKTQTRLVAKEPLFCNIITFYGRAGLPQNA 102
Query: 112 RKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIK 171
K+FDEMP C++T+ S+N LL + K+FD + F ++ K ++PD ++N +I+
Sbjct: 103 LKMFDEMPLYRCQRTIKSYNTLLNVLMICKEFDVMREHFVNI--KRHVKPDGCTFNIMIR 160
Query: 172 AFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN-VR 230
G +D A +L EM+ + + + +TF TL+ G N + +A K+ + MVN++ +
Sbjct: 161 GLCSDGRVDDALKVLDEMKNRDLVPNQVTFGTLIYGLCLNLKLKEAFKLKDYMVNVHGLC 220
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEE---A 287
PN Y + GL + AL L EM + D + LI G G +E
Sbjct: 221 PNEYVYATLIKGLCAVGELSFALRLKEEMERDGVKVDSAIYSTLISGLFKVGRKDEVFGV 280
Query: 288 KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAK 347
GC + + +++ C+ D + A+ + RC D +++ L K
Sbjct: 281 LMEMELKGCKADTVTYNVMINGFCKDKDFETAYKILDEMMENRCKPDVISYNVILGELCK 340
Query: 348 ELRVEEAKELVE 359
+ + EA +L E
Sbjct: 341 DGKWSEASDLFE 352
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 95/202 (47%), Gaps = 5/202 (2%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
++A KV DEM R+ ++F L+ G C+N K E L + + G+ P+ Y
Sbjct: 169 DDALKVLDEMKNRDLVPNQVTFGTLIYGLCLNLK-LKEAFKLKDYMVNVHGLCPNEYVYA 227
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
T+IK G L A L EME+ G+++D ++TL+ G + GR + + M
Sbjct: 228 TLIKGLCAVGELSFALRLKEEMERDGVKVDSAIYSTLISGLFKVGRKDEVFGVLMEMELK 287
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+ + +YN ++G +K + A +++ EM PDV ++ ++ +G EA
Sbjct: 288 GCKADTVTYNVMINGFCKDKDFETAYKILDEMMENRCKPDVISYNVILGELCKDGKWSEA 347
Query: 288 KRWYN---KSGCGMNKAIFKLL 306
+ + GC + ++++
Sbjct: 348 SDLFEDMPRRGCAPDVVSYRIV 369
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 73/154 (47%), Gaps = 1/154 (0%)
Query: 130 FNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEM 189
++ L+ + DEV G+ ++ K G + D V+YN +I F ++A +L EM
Sbjct: 261 YSTLISGLFKVGRKDEVFGVLMEMELK-GCKADTVTYNVMINGFCKDKDFETAYKILDEM 319
Query: 190 EKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQT 249
+ + D+I++N +L +G++++A ++E M P+V SY DGL+ +
Sbjct: 320 MENRCKPDVISYNVILGELCKDGKWSEASDLFEDMPRRGCAPDVVSYRIVFDGLSDAMEF 379
Query: 250 KKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
K A ++ EM K P + I G+
Sbjct: 380 KDAAFILDEMVFKGFAPRSSSICKFINRLCQNGD 413
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 68/156 (43%), Gaps = 7/156 (4%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I + K FE A K+ DEM C+ V+S+N +LG K+ E LF+D+P +
Sbjct: 299 MINGFCKDKDFETAYKILDEMMENRCKPDVISYNVILGELCKDGKWSEASDLFEDMPRR- 357
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G PD+VSY + D A +L EM KG + + NG D
Sbjct: 358 GCAPDVVSYRIVFDGLSDAMEFKDAAFILDEMVFKGFAPRSSSICKFINRLCQNG---DE 414
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKAL 253
+ +W +N + + + L +AI K ++
Sbjct: 415 DLVWSV---LNCLGKINAIDTELWKMAIAVALKNSM 447
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 176/365 (48%), Gaps = 22/365 (6%)
Query: 8 LSCSFSTTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGR-FRT--------NTG 58
L+ +F A A+ P F + + N+L +++ + KK + G FR+ +
Sbjct: 58 LALAFFRWAPASIPGFSHTA----FSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVC 113
Query: 59 IYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFT-ARLIALYGKAAMFENARKVFDE 117
Y + NA E+LE K + + FT +I A + A D
Sbjct: 114 SYNIVISGFCNAGDLHAALELLEEMKS-AGFAPDAFTHTPIITAMANAGDLDGA---MDH 169
Query: 118 MPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKG 177
+ C+ V+++ AL+ A +KK +E L +++ + G P+LV+YN ++ A
Sbjct: 170 LRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRER-GCPPNLVTYNVLVDALCKLS 228
Query: 178 SLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYN 237
+ +A ++ +M + G +++TFN+L+ GF G DA K+ MV +RPNV +Y+
Sbjct: 229 MVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYS 288
Query: 238 ARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---S 294
A +DGL ++ +A E++ EM+++ + PD FT+ ALI G +EEA++ + S
Sbjct: 289 ALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGS 348
Query: 295 GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA 354
GC + ++ ++ C+ G L A + +R D V+D L K ++ EA
Sbjct: 349 GCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEA 408
Query: 355 KELVE 359
+ ++E
Sbjct: 409 QVILE 413
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 134/266 (50%), Gaps = 5/266 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI K+ F A++V +EM R +++AL+ + K +E + + + +
Sbjct: 290 LIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGS- 348
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G PD+V Y++II AF G L A L EM K+ D++T+NT++ G G+ A+A
Sbjct: 349 GCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEA 408
Query: 218 EKIWETMV-NMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
+ I E M + +V P+V +Y+ ++GL +A +L+ M NPDV T+ +I
Sbjct: 409 QVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIID 468
Query: 277 GFVNEGNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV 333
G G LEEA+ + ++GC N + L+ +C+ +D A + + + C
Sbjct: 469 GLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPP 528
Query: 334 DQAPLQLVVDRLAKELRVEEAKELVE 359
+ +V+ L R++EA++LV+
Sbjct: 529 NLVTYNTMVNGLCVSGRIKEAQQLVQ 554
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 137/278 (49%), Gaps = 6/278 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+ + K ++ARK+ M + V++++AL+ S+KF E + +++ +
Sbjct: 255 LVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTR- 313
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ PD +Y+ +I ++ A +L M G D++ +++++ F +G+ +A
Sbjct: 314 GVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEA 373
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMR-SKEINPDVFTFYALIK 276
+K + M P+V +YN +DGL + +A ++ +M+ S ++ PDV T+ +I
Sbjct: 374 QKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVIN 433
Query: 277 GFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV 333
G L EA++ + K+GC + + ++ +C+ G L+ A L + C
Sbjct: 434 GLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAP 493
Query: 334 DQAPLQLVVDRLAKELRVEEAKELVELGKTNSYCRYNL 371
+ ++ L K +V+EA+ ++E + N+ C NL
Sbjct: 494 NVVTYTTLISGLCKARKVDEAERVMEEMR-NAGCPPNL 530
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 128/296 (43%), Gaps = 42/296 (14%)
Query: 53 FRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFT-ARLIALYGKAAMFENA 111
R N Y+ + L +++F +E+LE K + ++ + FT + LI KA E A
Sbjct: 280 MRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKT-RGVTPDAFTYSALIHGLCKADKIEEA 338
Query: 112 RKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE-----------------------VDG 148
++ M G C V+ +++++ A S K E +DG
Sbjct: 339 EQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDG 398
Query: 149 LFK------------DLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRL 196
L K + + PD+V+Y+T+I L A LL M K G
Sbjct: 399 LCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNP 458
Query: 197 DLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELV 256
D++T+ T++ G GR +AE + + M PNV +Y + GL ++ +A ++
Sbjct: 459 DVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVM 518
Query: 257 GEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN-----KSGCGMNKAIFKLLV 307
EMR+ P++ T+ ++ G G ++EA++ ++ C + A ++ +V
Sbjct: 519 EEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIV 574
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 71/169 (42%), Gaps = 8/169 (4%)
Query: 26 SVIRGIYKENNL---KRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEH 82
+VI G+ K + L ++L+D+ K+ + YT + L R E +L+
Sbjct: 430 TVINGLCKSDMLVEAQKLLDRMCKAG----CNPDVVTYTTIIDGLCKCGRLEEAEYLLQG 485
Query: 83 QKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKK 142
K+ LI+ KA + A +V +EM C ++++N ++ S +
Sbjct: 486 MKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGR 545
Query: 143 FDEVDGLFKDLPH-KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEME 190
E L + + + PD +Y TI+ A + + A LL +M+
Sbjct: 546 IKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQMK 594
>gi|15237345|ref|NP_197146.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170213|sp|Q9FFE3.1|PP388_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16420, mitochondrial; Flags: Precursor
gi|9759124|dbj|BAB09609.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332004907|gb|AED92290.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 535
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 160/326 (49%), Gaps = 8/326 (2%)
Query: 53 FRTNTGIYTGTVQRLANAKRFRWIEEIL-EHQKQYKDI-SKEGFTARLIALYGKAAMFEN 110
F N Y + +L+ A+ F +E ++ + + Y I E L+ YG A +E+
Sbjct: 79 FTHNYDTYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYES 138
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
+ ++F +P +++V S N LL + +++FD V +FK+ GI P++ + N ++
Sbjct: 139 SMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLV 198
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
KA K ++SA +L E+ G+ +L+T+ T+L G+ + G A+++ E M++
Sbjct: 199 KALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWY 258
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
P+ +Y +DG + +A ++ +M EI P+ T+ +I+ E EA+
Sbjct: 259 PDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNM 318
Query: 291 YN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAK 347
++ + + ++ ++ +CE +D A L ++ C+ D A L ++ L K
Sbjct: 319 FDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCK 378
Query: 348 ELRVEEAKEL---VELGKTNSYCRYN 370
E RV EA++L E G S YN
Sbjct: 379 EGRVTEARKLFDEFEKGSIPSLLTYN 404
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 131/304 (43%), Gaps = 50/304 (16%)
Query: 27 VIRGIYKENNLK---RLVDKFKKSSDLGRFRTNTGIYTGTVQR--LANAKRFRWIEEILE 81
+++ + K+N+++ +++D+ + T T I G V R + +AKR +EE+L+
Sbjct: 197 LVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRV--LEEMLD 254
Query: 82 HQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSK 141
+ Y D + +T L+ Y K F A V D+M E +++ ++ A K
Sbjct: 255 -RGWYPDATT--YTV-LMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEK 310
Query: 142 K-------FDE----------------VDGLFKDLPHKL-------------GIEPDLVS 165
K FDE +D L +D HK+ PD
Sbjct: 311 KSGEARNMFDEMLERSFMPDSSLCCKVIDALCED--HKVDEACGLWRKMLKNNCMPDNAL 368
Query: 166 YNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMV 225
+T+I +G + A L E EK I L+T+NTL+ G G +A ++W+ M
Sbjct: 369 LSTLIHWLCKEGRVTEARKLFDEFEKGSIP-SLLTYNTLIAGMCEKGELTEAGRLWDDMY 427
Query: 226 NMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLE 285
+PN +YN ++GL+ K+ + ++ EM P+ TF L +G G E
Sbjct: 428 ERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEE 487
Query: 286 EAKR 289
+A +
Sbjct: 488 DAMK 491
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 67/149 (44%), Gaps = 2/149 (1%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
+ A ++ +M NC + L+ + E LF + G P L++YNT
Sbjct: 348 DEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEK--GSIPSLLTYNT 405
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
+I +KG L A L +M ++ + + T+N L+ G NG + ++ E M+ +
Sbjct: 406 LIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIG 465
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVG 257
PN ++ +GL + + A+++V
Sbjct: 466 CFPNKTTFLILFEGLQKLGKEEDAMKIVS 494
>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
Length = 669
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 172/351 (49%), Gaps = 14/351 (3%)
Query: 16 ATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTN--TGIYTGTVQRLANAKRF 73
AT VI I K+ R+ D FK +D+G + N T YT ++ L A+R+
Sbjct: 313 GCATNTTLCNIVINSICKQG---RVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERW 369
Query: 74 RWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNAL 133
+E+L + E I + + + E A + ++M C V+++NAL
Sbjct: 370 DDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNAL 429
Query: 134 L-GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKK 192
+ G CV D LF+ +P K P+ ++Y T++ + LD A L+ EM +
Sbjct: 430 VNGFCVQGH-IDSALELFRSMPCK----PNTITYTTLLTGLCNAERLDGAAELVAEMLRG 484
Query: 193 GIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKA 252
+++TFN L+ F G +A ++ E M+ PN+ +YN LDG+ + ++ A
Sbjct: 485 DCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDA 544
Query: 253 LELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPF 309
LEL+ + SK ++PDV TF ++I E +EEA + ++ G ++ ++
Sbjct: 545 LELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLG 604
Query: 310 VCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVEL 360
+C++ ++D A + S C+ +++ ++++ LA E ++EA++L+ +
Sbjct: 605 LCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAQDLLSV 655
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 141/336 (41%), Gaps = 8/336 (2%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
+I G+ +E + + + G F+ +T YT ++ L +KR+ +EE+ +
Sbjct: 219 IINGMCREGRVDDARELLNRLPSYG-FQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEK 277
Query: 87 KDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEV 146
+ E LI + + M E A +V ++M C N ++ + + D+
Sbjct: 278 NCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDA 337
Query: 147 DGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLL 206
L D+ G PD +SY T++K D A LL EM + + +TFNT +
Sbjct: 338 FKLLNDM-GSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFIC 396
Query: 207 GFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINP 266
G A + E M V +YNA ++G ++ ALEL RS P
Sbjct: 397 ILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALEL---FRSMPCKP 453
Query: 267 DVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLC 323
+ T+ L+ G N L+ A + C N F +LV F C+KG L+ A L
Sbjct: 454 NTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELV 513
Query: 324 KRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
++ C + ++D + K+ E+A EL+
Sbjct: 514 EQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLH 549
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 121/264 (45%), Gaps = 7/264 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+A Y + + AR++ MP ++ L+ + + + L D+ +
Sbjct: 117 LVAGYCRYGHLDAARRLIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRR- 172
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G +P++V+Y +++A + A +L EM KG +++T+N ++ G GR DA
Sbjct: 173 GCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 232
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ + + +P+ SY L GL K+ EL EM K P+ TF LI+
Sbjct: 233 RELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRF 292
Query: 278 FVNEGNLEEAKR---WYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
F G +E A + + GC N + +++ +C++G +D AF L S C D
Sbjct: 293 FCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPD 352
Query: 335 QAPLQLVVDRLAKELRVEEAKELV 358
V+ L + R ++AKEL+
Sbjct: 353 TISYTTVLKGLCRAERWDDAKELL 376
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 110/253 (43%), Gaps = 4/253 (1%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
FE A V DEM + C ++++N ++ + D+ L LP G +PD VSY
Sbjct: 194 FEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLP-SYGFQPDTVSYT 252
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
T++K D L EM +K + +TF+ L+ F G A ++ E M
Sbjct: 253 TLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEH 312
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
N N ++ + + + A +L+ +M S NPD ++ ++KG ++A
Sbjct: 313 GCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDA 372
Query: 288 KRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDR 344
K N ++ C N+ F + +C+KG ++ A L ++ C V +V+
Sbjct: 373 KELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNG 432
Query: 345 LAKELRVEEAKEL 357
+ ++ A EL
Sbjct: 433 FCVQGHIDSALEL 445
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 105/239 (43%), Gaps = 41/239 (17%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G D+ +YNT++ + G LD+A L+ M + D T+ L+ GR ADA
Sbjct: 106 GSPVDVFAYNTLVAGYCRYGHLDAARRLIGSMP---VAPDAYTYTPLIRVLCDRGRVADA 162
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ + M+ +PNV +Y L+ + ++A+ ++ EMR+K P++ T+ +I G
Sbjct: 163 LSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIING 222
Query: 278 FVNEGNLEEA-----------------------------KRWYN---------KSGCGMN 299
EG +++A KRW + + C N
Sbjct: 223 MCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPN 282
Query: 300 KAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
+ F +L+ F C G ++ A + ++ C + +V++ + K+ RV++A +L+
Sbjct: 283 EVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLL 341
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 98/212 (46%), Gaps = 3/212 (1%)
Query: 54 RTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTAR-LIALYGKAAMFENAR 112
+ NT YT + L NA+R E++ + D T L++ + + E A
Sbjct: 452 KPNTITYTTLLTGLCNAERLDGAAELVAEMLR-GDCPPNVVTFNVLVSFFCQKGFLEEAI 510
Query: 113 KVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKA 172
++ ++M C ++++N LL ++ L L K G+ PD++++++II
Sbjct: 511 ELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSK-GVSPDVITFSSIIGI 569
Query: 173 FVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPN 232
+ ++ A L + ++ G+R + +N +LLG +A + MV+ PN
Sbjct: 570 LSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPN 629
Query: 233 VRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+Y ++GLA E K+A +L+ + S+ +
Sbjct: 630 ESTYIILIEGLAHEGLLKEAQDLLSVLCSRGV 661
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 74/173 (42%), Gaps = 8/173 (4%)
Query: 197 DLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELV 256
D+ L+ GR +DA ++ +V +YN + G A L+
Sbjct: 75 DVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLI 134
Query: 257 GEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEK 313
G M + PD +T+ LI+ + G + +A + + GC N + +L+ +C
Sbjct: 135 GSM---PVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRN 191
Query: 314 GDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKTNSY 366
+ A + ++ C + ++++ + +E RV++A+EL L + SY
Sbjct: 192 SGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREL--LNRLPSY 242
>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
Length = 385
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 142/297 (47%), Gaps = 3/297 (1%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFT-ARLIALYGKAAMFENARKVFDEM 118
Y + L A+R ++LE + Y + FT LI + K+ ++A +VF+++
Sbjct: 57 YNSLISGLCKAERASEAYDLLE-EMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQL 115
Query: 119 PGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGS 178
R V++++ L+ + E LF + P+ V+YN++I F G
Sbjct: 116 VARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGK 175
Query: 179 LDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNA 238
+D A LL M + G D++T+ TL+ GF R DA + M + PNV ++ +
Sbjct: 176 MDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTS 235
Query: 239 RLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY-NKSGCG 297
+DGL E + A+ ++GEMR K +P V+T+ ++ G+ LEEA+++ + C
Sbjct: 236 LMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLEEMDCP 295
Query: 298 MNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA 354
N F +++ +C+ A L + RC D V+D L +E +V+EA
Sbjct: 296 PNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEA 352
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 116/271 (42%), Gaps = 52/271 (19%)
Query: 70 AKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLS 129
A+ FR +++ + + KEG I L+G+ M ++ +C ++
Sbjct: 117 ARGFR--PDVVTYSCLIDGLCKEGRLKEAIDLFGR--MIKSG----------SCMPNTVT 162
Query: 130 FNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEM 189
+N+L+ K DE L + + + G PD+V+Y T++ F LD A LL +M
Sbjct: 163 YNSLISGFCRMGKMDEAMNLLERM-AETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQM 221
Query: 190 EKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM---------------------VN-- 226
+KG+ +++TF +L+ G R +DA I M VN
Sbjct: 222 TRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQL 281
Query: 227 ----------MNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
M+ PNV S+N + GL ++ +A+ELV E R + NPDV + +I
Sbjct: 282 EEARKFMLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVID 341
Query: 277 GFVNEGNLEEAKRWYNK----SGCGMNKAIF 303
E ++EA R Y K GC N +
Sbjct: 342 VLCREKKVDEACRVYRKMLEEPGCLPNSITY 372
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 100/202 (49%), Gaps = 4/202 (1%)
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
P V+YN++I A LL EM G D+ T+ TL+ GF + + DA ++
Sbjct: 52 PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 111
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM-RSKEINPDVFTFYALIKGFV 279
+E +V RP+V +Y+ +DGL E + K+A++L G M +S P+ T+ +LI GF
Sbjct: 112 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFC 171
Query: 280 NEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQA 336
G ++EA + +G + + L+ C+ LD A++L + + +
Sbjct: 172 RMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVV 231
Query: 337 PLQLVVDRLAKELRVEEAKELV 358
++D L +E R+ +A ++
Sbjct: 232 TFTSLMDGLCRENRLSDAVHIL 253
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/233 (19%), Positives = 95/233 (40%), Gaps = 3/233 (1%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
+I G+ KE LK +D F + G NT Y + + +LE +
Sbjct: 130 LIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAET 189
Query: 87 KDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEV 146
L+ + K A ++A + ++M + V++F +L+ + +
Sbjct: 190 GSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDA 249
Query: 147 DGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLL 206
+ ++ K P + +YNTI+ + L+ A + +E+ ++++FN ++
Sbjct: 250 VHILGEMRRK-SCSPTVYTYNTILDGYCRVNQLEEARKFM--LEEMDCPPNVVSFNIMIR 306
Query: 207 GFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
G R ++A ++ E P+V Y +D L EK+ +A + +M
Sbjct: 307 GLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEACRVYRKM 359
>gi|297735184|emb|CBI17546.3| unnamed protein product [Vitis vinifera]
Length = 371
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 145/305 (47%), Gaps = 48/305 (15%)
Query: 63 TVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRN 122
TV+RLA ++RF IE ++E K I++E + + LI Y
Sbjct: 77 TVKRLAKSRRFADIETLIESHKNDPKITQEPYLSTLIRSY-------------------- 116
Query: 123 CEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSA 182
V F+++P + G+ PD +SY ++K++ + G D A
Sbjct: 117 -----------------------VPKFFEEIPRRYGVLPDKISYGILVKSYCESGLSDKA 153
Query: 183 NTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDG 242
++L EME+KG+ + +TF T+L Y G+ AEK+W M +V +YN ++
Sbjct: 154 ISMLKEMEEKGVEITAVTFTTILDALYKQGQSDRAEKVWHEMAKKGCL-DVGAYNVKI-M 211
Query: 243 LAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMN 299
A + L+ EM + + PD ++ L+ + G ++EAK+ Y ++GC N
Sbjct: 212 FAHGGDPENVKALIDEMSNAGLKPDTISYNYLMTSYCKSGMVDEAKKVYAELEETGCHPN 271
Query: 300 KAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
A F+ L+ ++C GD + + + K++ R + D L+ +V+ L ++ + +EAK L+
Sbjct: 272 AATFRTLIYYLCRSGDFETGYKVFKQSAFRRKIPDFGTLRHLVEGLVQKKKTKEAKGLIR 331
Query: 360 LGKTN 364
K N
Sbjct: 332 TVKKN 336
>gi|225450630|ref|XP_002278172.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial [Vitis vinifera]
gi|296089757|emb|CBI39576.3| unnamed protein product [Vitis vinifera]
Length = 586
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 167/357 (46%), Gaps = 19/357 (5%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGR-FRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
V+ I ++ NL + F + R F N Y +++L+ A+ F +E ++ +
Sbjct: 104 VVSMISRQQNLDLALQIFDHAGKFHRNFAHNYETYLAMIEKLSKARAFEPMETLISQLHK 163
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
+ E +I YG A + A + F +P + +V SFN LL V +K+FD
Sbjct: 164 SQIKCGENLFITVIRNYGFAGRPKLAIRTFLRIPSFGLQPSVRSFNTLLNTLVQNKRFDL 223
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
V +FK+ K GI P++ + N ++KA K +D+A +L EM G +++T+ T+L
Sbjct: 224 VHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTIL 283
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEIN 265
G+ S G A +++ +++ P+ +Y +DG + + A++++ EM +
Sbjct: 284 GGYVSKGDMVGARRVFGEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVE 343
Query: 266 PDVFTFYALIKGFVNEGNLEEA---------KRWYNKSGCGMNKAIFKLLVPFVCEKGDL 316
P+ T+ +I+ + E E K++ S A+ ++ +CE+G +
Sbjct: 344 PNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPSS------ALCCRVIDMLCEEGKV 397
Query: 317 DFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL---VELGKTNSYCRYN 370
+ A L K+ + C D A ++ L KE +V EA++L E G S YN
Sbjct: 398 EVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEARKLFDEFEKGSIPSTLTYN 454
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 93/207 (44%), Gaps = 5/207 (2%)
Query: 102 YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEP 161
Y K F +A KV DEM E +++ ++ A KK EV L D+ K I P
Sbjct: 321 YCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYI-P 379
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
+I ++G ++ A L ++ KK D +TL+ G+ +A K++
Sbjct: 380 SSALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEARKLF 439
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
+ ++ P+ +YNA + G+ + +A L M K P+ FT+ LIKGF
Sbjct: 440 DEFEKGSI-PSTLTYNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFTYNMLIKGFCKV 498
Query: 282 GNLEEAKRWYNK---SGCGMNKAIFKL 305
GN E R + +GC NKA + +
Sbjct: 499 GNAREGIRVMEEMLDNGCLPNKATYAI 525
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/309 (20%), Positives = 119/309 (38%), Gaps = 41/309 (13%)
Query: 67 LANAKRFRWIEEILEHQKQYKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQ 125
L KRF + + ++ ++ I FT L+ K + A +V +EMP
Sbjct: 215 LVQNKRFDLVHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIP 274
Query: 126 TVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTL 185
V+++ +LG V+ +F ++ + G PD +Y ++ + KG A +
Sbjct: 275 NVVTYTTILGGYVSKGDMVGARRVFGEILDR-GWVPDPTTYTILMDGYCKKGRFMDAVKV 333
Query: 186 LYEMEKKGIRLDLITFNTLLLGFY-----------------------------------S 210
+ EME+ + + +T+ ++ +
Sbjct: 334 MDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPSSALCCRVIDMLCE 393
Query: 211 NGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
G+ A ++W+ ++ N P+ + + L E + +A +L E I P T
Sbjct: 394 EGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEARKLFDEFEKGSI-PSTLT 452
Query: 271 FYALIKGFVNEGNLEEAKR-WYN--KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTF 327
+ ALI G G L EA R W N + GC N + +L+ C+ G+ + +
Sbjct: 453 YNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFTYNMLIKGFCKVGNAREGIRVMEEML 512
Query: 328 SERCLVDQA 336
CL ++A
Sbjct: 513 DNGCLPNKA 521
>gi|255564599|ref|XP_002523294.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537382|gb|EEF39010.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 544
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 161/331 (48%), Gaps = 20/331 (6%)
Query: 53 FRTNTGIYTGTVQRLANAKRFRWIEEILE--HQKQYKDISKEGFTARLIALYGKAAMFEN 110
F N Y + +L+ A+ F +E +L H+ Q K E +I YG A +
Sbjct: 91 FSHNYDTYDSIIHKLSRARVFGPVELLLSDLHKSQIK--CGENIFINVIRNYGLAGKPDF 148
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A + F + N +++V S N LL A V +K++D V +FK+ K G+ P++ + N +I
Sbjct: 149 ALRTFIRIQDFNVQRSVRSLNTLLNAFVQNKRYDLVHAMFKNCRSKYGVLPNVFTCNILI 208
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
KA K ++SA +L EM G+ +++T+ T+L G+ S G +A K++ + +
Sbjct: 209 KALCKKNDVESAVKVLDEMPAMGMIPNVVTYTTILGGYSSRGDMVNANKVFGELFDRGWL 268
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK-- 288
P+ +Y ++G + + A++L+ +M + P+ T+ +++ + E EA+
Sbjct: 269 PDATTYTILMNGYCEQGRLADAIKLMDDMGENGVEPNEVTYGVMVEAYCKEKKAGEARNL 328
Query: 289 ------RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVV 342
R Y S A+ ++ +CE G ++ A L KR + C+ D A + ++
Sbjct: 329 LDDMLERQYVPS-----SALCCKVIDVLCEAGKIEEACELWKRMLKKNCMPDNAIMSTLI 383
Query: 343 DRLAKELRVEEAKEL---VELGKTNSYCRYN 370
L KE +V EA++L E G S YN
Sbjct: 384 HWLCKEGKVWEARKLFGEFERGAIPSLLTYN 414
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 100/239 (41%), Gaps = 9/239 (3%)
Query: 39 RLVDKFKKSSDLGR--FRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTA 96
RL D K D+G N Y V+ K+ +L+ + + +
Sbjct: 286 RLADAIKLMDDMGENGVEPNEVTYGVMVEAYCKEKKAGEARNLLDDMLERQYVPSSALCC 345
Query: 97 RLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHK 156
++I + +A E A +++ M +NC + L+ K E LF +
Sbjct: 346 KVIDVLCEAGKIEEACELWKRMLKKNCMPDNAIMSTLIHWLCKEGKVWEARKLFGEFER- 404
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
G P L++YNT+I +KG L A L +M +KG + + T+N L+ GF G +
Sbjct: 405 -GAIPSLLTYNTLIAGMCEKGELSEAGKLWDDMMEKGYKPNAFTYNMLIKGFSKIGNAKE 463
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGL---AIEKQTKKALELVGEMRSKEINPDVFTFY 272
+I E M++ PN +Y ++ L +E + K + + M S ++ D + +
Sbjct: 464 GIRILEEMLDNRCMPNKSTYAILIEELCKMGMEGEVDKVVSMA--MASGGVDSDSWDLF 520
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 98/220 (44%), Gaps = 5/220 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+ Y + +A K+ D+M E +++ ++ A KK E L D+ +
Sbjct: 277 LMNGYCEQGRLADAIKLMDDMGENGVEPNEVTYGVMVEAYCKEKKAGEARNLLDDMLERQ 336
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
+ P +I + G ++ A L M KK D +TL+ G+ +A
Sbjct: 337 YV-PSSALCCKVIDVLCEAGKIEEACELWKRMLKKNCMPDNAIMSTLIHWLCKEGKVWEA 395
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
K++ + P++ +YN + G+ + + +A +L +M K P+ FT+ LIKG
Sbjct: 396 RKLFGEFERGAI-PSLLTYNTLIAGMCEKGELSEAGKLWDDMMEKGYKPNAFTYNMLIKG 454
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKG 314
F GN +E R + + C NK+ + +L+ +C+ G
Sbjct: 455 FSKIGNAKEGIRILEEMLDNRCMPNKSTYAILIEELCKMG 494
>gi|147821100|emb|CAN70963.1| hypothetical protein VITISV_038268 [Vitis vinifera]
Length = 844
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 169/359 (47%), Gaps = 23/359 (6%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGR-FRTNTGIYTGTVQRLANAKRFRWIEEILE--HQ 83
V+ I ++ NL + F + R F N Y +++L+ A+ F +E ++ H+
Sbjct: 104 VVSMISRQQNLDLALQIFDHAGKFHRNFAHNYETYLAMIEKLSKARAFEPMETLISQLHK 163
Query: 84 KQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKF 143
Q K E +I YG A + A + F +P + +V SFN LL V +K+F
Sbjct: 164 SQIK--CGENLFITVIRNYGFAGRPKLAIRTFLRIPSFGLQPSVRSFNTLLNTLVQNKRF 221
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT 203
D V +FK+ K GI P++ + N ++KA K +D+A +L EM G +++T+ T
Sbjct: 222 DLVHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTT 281
Query: 204 LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
+L G+ S G A +++ +++ P+ +Y +DG + + A++++ EM
Sbjct: 282 ILGGYVSKGDMVGARRVFGEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENR 341
Query: 264 INPDVFTFYALIKGFVNEGNLEEA---------KRWYNKSGCGMNKAIFKLLVPFVCEKG 314
+ P+ T+ +I+ + E E K++ S A+ ++ +CE+G
Sbjct: 342 VEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPSS------ALCCRVIDMLCEEG 395
Query: 315 DLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL---VELGKTNSYCRYN 370
++ A L K+ + C D A ++ L KE +V EA++L E G S YN
Sbjct: 396 KVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEARKLFDEFEKGSIPSTLTYN 454
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 93/207 (44%), Gaps = 5/207 (2%)
Query: 102 YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEP 161
Y K F +A KV DEM E +++ ++ A KK EV L D+ K I P
Sbjct: 321 YCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYI-P 379
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
+I ++G ++ A L ++ KK D +TL+ G+ +A K++
Sbjct: 380 SSALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEARKLF 439
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
+ ++ P+ +YNA + G+ + +A L M K P+ FT+ LIKGF
Sbjct: 440 DEFEKGSI-PSTLTYNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFTYNMLIKGFCKV 498
Query: 282 GNLEEAKRWYNK---SGCGMNKAIFKL 305
GN E R + +GC NKA + +
Sbjct: 499 GNAREGIRVMEEMLDNGCLPNKATYAI 525
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/309 (20%), Positives = 119/309 (38%), Gaps = 41/309 (13%)
Query: 67 LANAKRFRWIEEILEHQKQYKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQ 125
L KRF + + ++ ++ I FT L+ K + A +V +EMP
Sbjct: 215 LVQNKRFDLVHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIP 274
Query: 126 TVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTL 185
V+++ +LG V+ +F ++ + G PD +Y ++ + KG A +
Sbjct: 275 NVVTYTTILGGYVSKGDMVGARRVFGEILDR-GWVPDPTTYTILMDGYCKKGRFMDAVKV 333
Query: 186 LYEMEKKGIRLDLITFNTLLLGFY-----------------------------------S 210
+ EME+ + + +T+ ++ +
Sbjct: 334 MDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPSSALCCRVIDMLCE 393
Query: 211 NGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
G+ A ++W+ ++ N P+ + + L E + +A +L E I P T
Sbjct: 394 EGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEARKLFDEFEKGSI-PSTLT 452
Query: 271 FYALIKGFVNEGNLEEAKR-WYN--KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTF 327
+ ALI G G L EA R W N + GC N + +L+ C+ G+ + +
Sbjct: 453 YNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFTYNMLIKGFCKVGNAREGIRVMEEML 512
Query: 328 SERCLVDQA 336
CL ++A
Sbjct: 513 DNGCLPNKA 521
>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
Length = 500
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 142/297 (47%), Gaps = 3/297 (1%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFT-ARLIALYGKAAMFENARKVFDEM 118
Y + L A+R ++LE + Y + FT LI + K+ ++A +VF+++
Sbjct: 118 YNSLISGLCKAERASEAYDLLE-EMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQL 176
Query: 119 PGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGS 178
R V++++ L+ + E LF + P+ V+YN++I F G
Sbjct: 177 VARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGK 236
Query: 179 LDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNA 238
+D A LL M + G D++T+ TL+ GF R DA + M + P+V ++ +
Sbjct: 237 MDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTS 296
Query: 239 RLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY-NKSGCG 297
+DGL E + A+ ++GEMR K +P V+T+ ++ G+ LEEA+++ + C
Sbjct: 297 LMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCP 356
Query: 298 MNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA 354
N F +++ +C+ A L + RC D V+D L +E +V+EA
Sbjct: 357 PNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEA 413
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 147/328 (44%), Gaps = 58/328 (17%)
Query: 70 AKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLS 129
A+ FR +++ + + KEG I L+G+ M ++ +C ++
Sbjct: 178 ARGFR--PDVVTYSCLIDGLCKEGRLKEAIDLFGR--MIKSG----------SCMPNTVT 223
Query: 130 FNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEM 189
+N+L+ K DE L + + G PD+V+Y T++ F LD A LL +M
Sbjct: 224 YNSLISGFCRMGKMDEAMNLLERMAET-GSSPDVVTYTTLMNGFCKLARLDDAYDLLNQM 282
Query: 190 EKKGIRLDLITFNTLLLGFYSNGRFADAEKI---------------WETMVN-------- 226
+KG+ D++TF +L+ G R +DA I + T+++
Sbjct: 283 TRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQL 342
Query: 227 ----------MNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
M+ PNV S+N + GL ++ +A+ELV E R + NPDV + +I
Sbjct: 343 EEARKFMLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVID 402
Query: 277 GFVNEGNLEEAKRWYNK----SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSER-C 331
G E ++EA R Y K GC N + L+ +C G LD A R + E+ C
Sbjct: 403 GLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRA-----RGYIEKGC 457
Query: 332 LVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ + L++D K R E+A+EL++
Sbjct: 458 VPNIGTYNLLIDAFRKANRDEDARELLD 485
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 140/306 (45%), Gaps = 12/306 (3%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQ---YKDISKEGFTARLIALYGKAAMFENARKVFD 116
YT +Q L KR L + D+ +TA + AL + + E ARK +
Sbjct: 14 YTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYT--YTAVIHALCVENRLHE-ARKFLE 70
Query: 117 EMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDK 176
EM RN V+++ L+ + DE L + K P V+YN++I
Sbjct: 71 EMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK--CVPTAVTYNSLISGLCKA 128
Query: 177 GSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSY 236
A LL EM G D+ T+ TL+ GF + + DA +++E +V RP+V +Y
Sbjct: 129 ERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTY 188
Query: 237 NARLDGLAIEKQTKKALELVGEM-RSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK-- 293
+ +DGL E + K+A++L G M +S P+ T+ +LI GF G ++EA +
Sbjct: 189 SCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMA 248
Query: 294 -SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVE 352
+G + + L+ C+ LD A++L + + D ++D L +E R+
Sbjct: 249 ETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLS 308
Query: 353 EAKELV 358
+A ++
Sbjct: 309 DAVHIL 314
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 90/199 (45%), Gaps = 4/199 (2%)
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
D V+Y ++I+ L+ A L +M KG D+ T+ ++ R +A K
Sbjct: 10 DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
E M N N+ PNV +Y +DGL + +A+ L+ +MR K + P T+ +LI G
Sbjct: 70 EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKA 128
Query: 282 GNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPL 338
EA + SGC + + L+ C+ D A + ++ + D
Sbjct: 129 ERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTY 188
Query: 339 QLVVDRLAKELRVEEAKEL 357
++D L KE R++EA +L
Sbjct: 189 SCLIDGLCKEGRLKEAIDL 207
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 96/228 (42%), Gaps = 14/228 (6%)
Query: 37 LKRLVDKFKKSSDLGR--FRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGF 94
L RL D + + + R + +T + L R IL ++ K S +
Sbjct: 269 LARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRR-KSCSPTVY 327
Query: 95 TARLIA-LYGKAAMFENARK-VFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKD 152
T I Y +A E ARK + +EM +C V+SFN ++ + E L ++
Sbjct: 328 TYNTILDGYCRANQLEEARKFMLEEM---DCPPNVVSFNIMIRGLCKVNRSSEAMELVEE 384
Query: 153 LPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEM-EKKGIRLDLITFNTLLLGFYSN 211
+ PD+V Y T+I + +D A + +M E+ G + IT++TL+ G +
Sbjct: 385 -ARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNA 443
Query: 212 GRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
G A E PN+ +YN +D + + A EL+ +M
Sbjct: 444 GMLDRARGYIEK----GCVPNIGTYNLLIDAFRKANRDEDARELLDDM 487
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 90/209 (43%), Gaps = 23/209 (11%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYT--------GTVQRLANAKRFRWIE 77
S++ G+ +EN RL D ++ R + +YT +L A++F
Sbjct: 296 SLMDGLCREN---RLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKF---- 348
Query: 78 EILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGAC 137
+LE ++ R + +++ A ++ +E R C V+ + ++
Sbjct: 349 -MLEEMDCPPNVVSFNIMIRGLCKVNRSS---EAMELVEEARRRRCNPDVVMYTTVIDGL 404
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLD 197
KK DE +++ + + G P+ ++Y+T+I + G LD A + +KG +
Sbjct: 405 CREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRARGYI----EKGCVPN 460
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVN 226
+ T+N L+ F R DA ++ + MV
Sbjct: 461 IGTYNLLIDAFRKANRDEDARELLDDMVQ 489
>gi|297807667|ref|XP_002871717.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317554|gb|EFH47976.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 533
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 160/326 (49%), Gaps = 8/326 (2%)
Query: 53 FRTNTGIYTGTVQRLANAKRFRWIEEIL-EHQKQYKDI-SKEGFTARLIALYGKAAMFEN 110
F N Y + +L+ A+ F +E ++ + + Y I E L+ YG A +E+
Sbjct: 77 FTHNYDTYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYES 136
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
+ ++F +P +++V S N LL + +++FD V +FK+ GI P++ + N ++
Sbjct: 137 SMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLV 196
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
KA K ++SA +L E+ G+ +L+T+ T+L G+ + G A+++ E M++
Sbjct: 197 KALCKKNDIESAYKVLDEIPAMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWY 256
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
P+ +Y +DG + +A ++ +M EI P+ T+ +I+ E EA+
Sbjct: 257 PDAITYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNM 316
Query: 291 YNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAK 347
+++ + ++ ++ +CE +D A L ++ C+ D A L ++ L K
Sbjct: 317 FDEMLDRSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCK 376
Query: 348 ELRVEEAKEL---VELGKTNSYCRYN 370
E RV EA++L + G S YN
Sbjct: 377 EGRVSEARKLFDEFDKGSIPSLLTYN 402
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 134/288 (46%), Gaps = 16/288 (5%)
Query: 27 VIRGIYKENNLK---RLVDKFKKSSDLGRFRTNTGIYTGTVQR--LANAKRFRWIEEILE 81
+++ + K+N+++ +++D+ + T T I G V R + +AKR +EE+L+
Sbjct: 195 LVKALCKKNDIESAYKVLDEIPAMGLVPNLVTYTTILGGYVARGDMESAKRV--LEEMLD 252
Query: 82 HQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSK 141
+ Y D +T L+ Y K F A V D+M E +++ ++ A K
Sbjct: 253 -RGWYPDAIT--YTV-LMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEK 308
Query: 142 KFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITF 201
K E +F ++ + PD +I A + +D A L +M K D
Sbjct: 309 KSGEARNMFDEMLDR-SFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALL 367
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS 261
+TL+ GR ++A K+++ ++ P++ +YN + G+ + + +A L +M
Sbjct: 368 STLIHWLCKEGRVSEARKLFDEFDKGSI-PSLLTYNTLIAGMCEKGELTEAGRLWDDMFE 426
Query: 262 KEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLL 306
++ P+ FT+ LI+G GN++E R +SGC NK F +L
Sbjct: 427 RKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLESGCFPNKTTFLIL 474
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 82/177 (46%), Gaps = 2/177 (1%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
AR +FDEM R+ ++ A K DE GL++ + K PD +T+I
Sbjct: 313 ARNMFDEMLDRSFMPDSSLCCKVIDALCEDHKVDEACGLWRKM-LKNNCMPDNALLSTLI 371
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
+G + A L E +K I L+T+NTL+ G G +A ++W+ M +
Sbjct: 372 HWLCKEGRVSEARKLFDEFDKGSIP-SLLTYNTLIAGMCEKGELTEAGRLWDDMFERKCK 430
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
PN +YN ++GL+ K+ + ++ EM P+ TF L +G G E+A
Sbjct: 431 PNAFTYNVLIEGLSKNGNVKEGVRVLEEMLESGCFPNKTTFLILFEGLQKLGKEEDA 487
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 64/140 (45%), Gaps = 10/140 (7%)
Query: 118 MPGRNCEQTVLSFNALLGACVNSKK-FDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDK 176
MP T++ + G ++K FDE D G P L++YNT+I +K
Sbjct: 361 MPDNALLSTLIHWLCKEGRVSEARKLFDEFDK---------GSIPSLLTYNTLIAGMCEK 411
Query: 177 GSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSY 236
G L A L +M ++ + + T+N L+ G NG + ++ E M+ PN ++
Sbjct: 412 GELTEAGRLWDDMFERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLESGCFPNKTTF 471
Query: 237 NARLDGLAIEKQTKKALELV 256
+GL + + A+++V
Sbjct: 472 LILFEGLQKLGKEEDAIKIV 491
>gi|449456681|ref|XP_004146077.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g53330-like [Cucumis sativus]
Length = 527
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 168/347 (48%), Gaps = 42/347 (12%)
Query: 53 FRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDIS-KEGFTARLIALYGKAAMFENA 111
FR + Y + +L AK F +EEIL+ KQ + E +IA YG+A + + A
Sbjct: 111 FRYSLLSYDLIISKLGRAKMFDEMEEILQQLKQETRFAPHEVIFCNVIAFYGRAHLPDRA 170
Query: 112 RKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIK 171
+VF+ +P C++TV S N+LL A + +++ +++ +F D+ + PD ++N +I
Sbjct: 171 FQVFERIPSFRCKRTVKSVNSLLAALLKNRQLEKMTQVFVDISNYGS--PDACTFNILIH 228
Query: 172 AFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM-NVR 230
A G LD+ + EM+K+G++ +++TF TL+ G N + +A ++ E MV + ++
Sbjct: 229 AACLCGDLDAVWGVFDEMQKRGVKPNVVTFGTLIYGLSLNSKLKEALRLKEDMVKVYMIK 288
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEM-----------------------RSKEIN-- 265
PN Y + G + A +L EM R +E++
Sbjct: 289 PNASIYTTLIKGFCGVGELNFAFKLKEEMVTSNVKLVSAVYSTLISALFKHGRKEEVSDI 348
Query: 266 ----------PDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCE 312
PD T+ A+I G E +LE A R + + GC + F ++ ++C+
Sbjct: 349 LREMGENGCKPDTVTYNAIINGHCKENDLESAHRVMDEMVEKGCKPDVFSFNTIIGWLCK 408
Query: 313 KGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+G LD A +L + C D +++ D L + ++++EA +++
Sbjct: 409 EGKLDKAMDLLEDMPRRGCPPDVLSYRIIFDGLCEMMQLKEATSILD 455
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 95/202 (47%), Gaps = 3/202 (1%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A K+ +EM N + ++ L+ A + +EV + +++ G +PD V+YN II
Sbjct: 310 AFKLKEEMVTSNVKLVSAVYSTLISALFKHGRKEEVSDILREMGEN-GCKPDTVTYNAII 368
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
+ L+SA+ ++ EM +KG + D+ +FNT++ G+ A + E M
Sbjct: 369 NGHCKENDLESAHRVMDEMVEKGCKPDVFSFNTIIGWLCKEGKLDKAMDLLEDMPRRGCP 428
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
P+V SY DGL Q K+A ++ EM K P + L+ E N+E
Sbjct: 429 PDVLSYRIIFDGLCEMMQLKEATSILDEMIFKGYVPRNESINKLVDRLCQECNMELLWMI 488
Query: 291 YNKSGCG--MNKAIFKLLVPFV 310
N G G MN ++ +V FV
Sbjct: 489 LNSLGRGNRMNMDMWARVVAFV 510
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 61/137 (44%), Gaps = 1/137 (0%)
Query: 57 TGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFD 116
+ +Y+ + L R + +IL + +I + K E+A +V D
Sbjct: 326 SAVYSTLISALFKHGRKEEVSDILREMGENGCKPDTVTYNAIINGHCKENDLESAHRVMD 385
Query: 117 EMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDK 176
EM + C+ V SFN ++G K D+ L +D+P + G PD++SY I +
Sbjct: 386 EMVEKGCKPDVFSFNTIIGWLCKEGKLDKAMDLLEDMPRR-GCPPDVLSYRIIFDGLCEM 444
Query: 177 GSLDSANTLLYEMEKKG 193
L A ++L EM KG
Sbjct: 445 MQLKEATSILDEMIFKG 461
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 107/250 (42%), Gaps = 8/250 (3%)
Query: 119 PGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGS 178
P + ++LS++ ++ +K FDE++ + + L + P V + +I AF +
Sbjct: 107 PPKPFRYSLLSYDLIISKLGRAKMFDEMEEILQQLKQETRFAPHEVIFCNVI-AFYGRAH 165
Query: 179 L-DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYN 237
L D A + + + + + N+LL N + +++ + N P+ ++N
Sbjct: 166 LPDRAFQVFERIPSFRCKRTVKSVNSLLAALLKNRQLEKMTQVFVDISNYG-SPDACTFN 224
Query: 238 ARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS--- 294
+ + + EM+ + + P+V TF LI G L+EA R
Sbjct: 225 ILIHAACLCGDLDAVWGVFDEMQKRGVKPNVVTFGTLIYGLSLNSKLKEALRLKEDMVKV 284
Query: 295 -GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEE 353
N +I+ L+ C G+L+FAF L + + + A ++ L K R EE
Sbjct: 285 YMIKPNASIYTTLIKGFCGVGELNFAFKLKEEMVTSNVKLVSAVYSTLISALFKHGRKEE 344
Query: 354 AKELV-ELGK 362
+++ E+G+
Sbjct: 345 VSDILREMGE 354
>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
Length = 500
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 142/297 (47%), Gaps = 3/297 (1%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFT-ARLIALYGKAAMFENARKVFDEM 118
Y + L A+R ++LE + Y + FT LI + K+ ++A +VF+++
Sbjct: 118 YNSLISGLCKAERASEAYDLLE-EMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQL 176
Query: 119 PGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGS 178
R V++++ L+ + E LF + P+ V+YN++I F G
Sbjct: 177 VARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGK 236
Query: 179 LDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNA 238
+D A LL M + G D++T+ TL+ GF R DA + M + P+V ++ +
Sbjct: 237 MDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTS 296
Query: 239 RLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY-NKSGCG 297
+DGL E + A+ ++GEMR K +P V+T+ ++ G+ LEEA+++ + C
Sbjct: 297 LMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCP 356
Query: 298 MNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA 354
N F +++ +C+ A L + RC D V+D L +E +V+EA
Sbjct: 357 PNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEA 413
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 147/328 (44%), Gaps = 58/328 (17%)
Query: 70 AKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLS 129
A+ FR +++ + + KEG I L+G+ M ++ +C ++
Sbjct: 178 ARGFR--PDVVTYSCLIDGLCKEGRLKEAIDLFGR--MIKSG----------SCMPNTVT 223
Query: 130 FNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEM 189
+N+L+ K DE L + + G PD+V+Y T++ F LD A LL +M
Sbjct: 224 YNSLISGFCRMGKMDEAMNLLERMAET-GSSPDVVTYTTLMNGFCKLARLDDAYDLLNQM 282
Query: 190 EKKGIRLDLITFNTLLLGFYSNGRFADAEKI---------------WETMVN-------- 226
+KG+ D++TF +L+ G R +DA I + T+++
Sbjct: 283 TRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQL 342
Query: 227 ----------MNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
M+ PNV S+N + GL ++ +A+ELV E R + NPDV + +I
Sbjct: 343 EEARKFMLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVID 402
Query: 277 GFVNEGNLEEAKRWYNK----SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSER-C 331
G E ++EA R Y K GC N + LV +C G LD A R + E+ C
Sbjct: 403 GLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRA-----RGYIEKGC 457
Query: 332 LVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ + L++D K R E+A+EL++
Sbjct: 458 VPNIGTYNLLIDAFRKANRDEDARELLD 485
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 140/306 (45%), Gaps = 12/306 (3%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQ---YKDISKEGFTARLIALYGKAAMFENARKVFD 116
YT +Q L KR L + D+ +TA + AL + + E ARK +
Sbjct: 14 YTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYT--YTAVIHALCVENRLHE-ARKFLE 70
Query: 117 EMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDK 176
EM RN V+++ L+ + DE L + K P V+YN++I
Sbjct: 71 EMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK--CVPTAVTYNSLISGLCKA 128
Query: 177 GSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSY 236
A LL EM G D+ T+ TL+ GF + + DA +++E +V RP+V +Y
Sbjct: 129 ERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTY 188
Query: 237 NARLDGLAIEKQTKKALELVGEM-RSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK-- 293
+ +DGL E + K+A++L G M +S P+ T+ +LI GF G ++EA +
Sbjct: 189 SCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMA 248
Query: 294 -SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVE 352
+G + + L+ C+ LD A++L + + D ++D L +E R+
Sbjct: 249 ETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLS 308
Query: 353 EAKELV 358
+A ++
Sbjct: 309 DAVHIL 314
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 90/199 (45%), Gaps = 4/199 (2%)
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
D V+Y ++I+ L+ A L +M KG D+ T+ ++ R +A K
Sbjct: 10 DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
E M N N+ PNV +Y +DGL + +A+ L+ +MR K + P T+ +LI G
Sbjct: 70 EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKA 128
Query: 282 GNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPL 338
EA + SGC + + L+ C+ D A + ++ + D
Sbjct: 129 ERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTY 188
Query: 339 QLVVDRLAKELRVEEAKEL 357
++D L KE R++EA +L
Sbjct: 189 SCLIDGLCKEGRLKEAIDL 207
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 96/228 (42%), Gaps = 14/228 (6%)
Query: 37 LKRLVDKFKKSSDLGR--FRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGF 94
L RL D + + + R + +T + L R IL ++ K S +
Sbjct: 269 LARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRR-KSCSPTVY 327
Query: 95 TARLIA-LYGKAAMFENARK-VFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKD 152
T I Y +A E ARK + +EM +C V+SFN ++ + E L ++
Sbjct: 328 TYNTILDGYCRANQLEEARKFMLEEM---DCPPNVVSFNIMIRGLCKVNRSSEAMELVEE 384
Query: 153 LPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEM-EKKGIRLDLITFNTLLLGFYSN 211
+ PD+V Y T+I + +D A + +M E+ G + IT++TL+ G +
Sbjct: 385 -ARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNA 443
Query: 212 GRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
G A E PN+ +YN +D + + A EL+ +M
Sbjct: 444 GMLDRARGYIEK----GCVPNIGTYNLLIDAFRKANRDEDARELLDDM 487
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 90/209 (43%), Gaps = 23/209 (11%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYT--------GTVQRLANAKRFRWIE 77
S++ G+ +EN RL D ++ R + +YT +L A++F
Sbjct: 296 SLMDGLCREN---RLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKF---- 348
Query: 78 EILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGAC 137
+LE ++ R + +++ A ++ +E R C V+ + ++
Sbjct: 349 -MLEEMDCPPNVVSFNIMIRGLCKVNRSS---EAMELVEEARRRRCNPDVVMYTTVIDGL 404
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLD 197
KK DE +++ + + G P+ ++Y+T++ + G LD A + +KG +
Sbjct: 405 CREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRARGYI----EKGCVPN 460
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVN 226
+ T+N L+ F R DA ++ + MV
Sbjct: 461 IGTYNLLIDAFRKANRDEDARELLDDMVQ 489
>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g59900
gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 907
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 154/340 (45%), Gaps = 10/340 (2%)
Query: 7 LLSCSFSTTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQR 66
+L FS + A + S++ G+ K ++ ++ K+ D G N +Y +
Sbjct: 323 MLCLRFSPSEAA-----VSSLVEGLRKRGKIEEALNLVKRVVDFG-VSPNLFVYNALIDS 376
Query: 67 LANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQT 126
L ++F E + + + + + LI ++ + + A EM + +
Sbjct: 377 LCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLS 436
Query: 127 VLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLL 186
V +N+L+ +G ++ +K +EP +V+Y +++ + KG ++ A L
Sbjct: 437 VYPYNSLINGHCKFGDISAAEGFMAEMINK-KLEPTVVTYTSLMGGYCSKGKINKALRLY 495
Query: 187 YEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIE 246
+EM KGI + TF TLL G + G DA K++ M NV+PN +YN ++G E
Sbjct: 496 HEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEE 555
Query: 247 KQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNKAIF 303
KA E + EM K I PD +++ LI G G EAK + +K C +N+ +
Sbjct: 556 GDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICY 615
Query: 304 KLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVD 343
L+ C +G L+ A ++C+ +D +++D
Sbjct: 616 TGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLID 655
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 140/314 (44%), Gaps = 5/314 (1%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMP 119
Y V L + F E+++ + E + L+ K E A + +
Sbjct: 300 YCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVV 359
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL 179
+ +NAL+ + +KF E + LF D K+G+ P+ V+Y+ +I F +G L
Sbjct: 360 DFGVSPNLFVYNALIDSLCKGRKFHEAELLF-DRMGKIGLRPNDVTYSILIDMFCRRGKL 418
Query: 180 DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNAR 239
D+A + L EM G++L + +N+L+ G G + AE M+N + P V +Y +
Sbjct: 419 DTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSL 478
Query: 240 LDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSG---C 296
+ G + + KAL L EM K I P ++TF L+ G G + +A + +N+
Sbjct: 479 MGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNV 538
Query: 297 GMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKE 356
N+ + +++ CE+GD+ AF K + + D + ++ L + EAK
Sbjct: 539 KPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKV 598
Query: 357 LVELGKTNSYCRYN 370
V+ G C N
Sbjct: 599 FVD-GLHKGNCELN 611
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 128/296 (43%), Gaps = 28/296 (9%)
Query: 85 QYKDISK-EGFTARLI---------------ALYGKAAMFENARKVFDEMPGRNCEQTVL 128
++ DIS EGF A +I Y A +++ EM G+ ++
Sbjct: 449 KFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIY 508
Query: 129 SFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
+F LL + + LF ++ + ++P+ V+YN +I+ + ++G + A L E
Sbjct: 509 TFTTLLSGLFRAGLIRDAVKLFNEMA-EWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKE 567
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
M +KGI D ++ L+ G G+ ++A+ + + N N Y L G E +
Sbjct: 568 MTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGK 627
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNE-------GNLEEAKRWYNKSGCGMNKA 301
++AL + EM + ++ D+ + LI G + G L+E + G +
Sbjct: 628 LEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEM----HDRGLKPDDV 683
Query: 302 IFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
I+ ++ + GD AF + +E C+ ++ V++ L K V EA+ L
Sbjct: 684 IYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVL 739
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 127/319 (39%), Gaps = 42/319 (13%)
Query: 80 LEHQKQYKDISKE--GFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGAC 137
L H+ K I+ FT L L+ +A + +A K+F+EM N + +++N ++
Sbjct: 494 LYHEMTGKGIAPSIYTFTTLLSGLF-RAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGY 552
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLD 197
+ K++ K GI PD SY +I G A + + K L+
Sbjct: 553 CEEGDMSKAFEFLKEMTEK-GIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELN 611
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
I + LL GF G+ +A + + MV V ++ Y +DG K K L+
Sbjct: 612 EICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLK 671
Query: 258 EMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKG 314
EM + + PD + ++I G+ +EA ++ GC N+ + ++ +C+ G
Sbjct: 672 EMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAG 731
Query: 315 DLDFAFNLCKRT---------FSERCLVD--------------------------QAPLQ 339
++ A LC + + C +D A
Sbjct: 732 FVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYN 791
Query: 340 LVVDRLAKELRVEEAKELV 358
+++ ++ R+EEA EL+
Sbjct: 792 MLIRGFCRQGRIEEASELI 810
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 130/295 (44%), Gaps = 16/295 (5%)
Query: 70 AKRFRWIEEILEHQKQYKDISKEGFTARLI----ALYGKAAMFENARKVFDEMPGRNCEQ 125
+K F +++E+ E K I + ++ R + L G+A+ A+ D + NCE
Sbjct: 559 SKAFEFLKEMTE-----KGIVPDTYSYRPLIHGLCLTGQAS---EAKVFVDGLHKGNCEL 610
Query: 126 TVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTL 185
+ + LL K +E + +++ + G++ DLV Y +I + L
Sbjct: 611 NEICYTGLLHGFCREGKLEEALSVCQEMVQR-GVDLDLVCYGVLIDGSLKHKDRKLFFGL 669
Query: 186 LYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAI 245
L EM +G++ D + + +++ G F +A IW+ M+N PN +Y A ++GL
Sbjct: 670 LKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCK 729
Query: 246 EKQTKKALELVGEMRSKEINPDVFTFYALIKGFV-NEGNLEEAKRWYNK--SGCGMNKAI 302
+A L +M+ P+ T+ + E ++++A +N G N A
Sbjct: 730 AGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTAT 789
Query: 303 FKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
+ +L+ C +G ++ A L R + D +++ L + V++A EL
Sbjct: 790 YNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIEL 844
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 138/306 (45%), Gaps = 13/306 (4%)
Query: 24 IGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQ 83
+ +++ G+ K + ++ F +G R + IYTG ++ L K +E++ H
Sbjct: 195 LSALLHGLVKFRHFGLAMELFNDMVSVG-IRPDVYIYTGVIRSLCELKDLSRAKEMIAHM 253
Query: 84 KQYK-DISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKK 142
+ D++ + + L K ++E A + ++ G++ + V+++ L+ ++
Sbjct: 254 EATGCDVNIVPYNVLIDGLCKKQKVWE-AVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQE 312
Query: 143 FDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFN 202
F E+ D L P + +++++ +G ++ A L+ + G+ +L +N
Sbjct: 313 F-EIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYN 371
Query: 203 TLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
L+ +F +AE +++ M + +RPN +Y+ +D + AL +GEM
Sbjct: 372 ALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDT 431
Query: 263 EINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKAIFKLLVPFV------CEKGDL 316
+ V+ + +LI G G++ A+ + + +NK + +V + C KG +
Sbjct: 432 GLKLSVYPYNSLINGHCKFGDISAAEGFMAEM---INKKLEPTVVTYTSLMGGYCSKGKI 488
Query: 317 DFAFNL 322
+ A L
Sbjct: 489 NKALRL 494
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 89/189 (47%), Gaps = 4/189 (2%)
Query: 127 VLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLL 186
V + +ALL V + F LF D+ +GI PD+ Y +I++ + L A ++
Sbjct: 192 VRTLSALLHGLVKFRHFGLAMELFNDMV-SVGIRPDVYIYTGVIRSLCELKDLSRAKEMI 250
Query: 187 YEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIE 246
ME G ++++ +N L+ G + +A I + + +++P+V +Y + GL
Sbjct: 251 AHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKV 310
Query: 247 KQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS---GCGMNKAIF 303
++ + LE++ EM +P +L++G G +EEA + G N ++
Sbjct: 311 QEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVY 370
Query: 304 KLLVPFVCE 312
L+ +C+
Sbjct: 371 NALIDSLCK 379
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 86/197 (43%), Gaps = 3/197 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I K F+ A ++D M C +++ A++ + +E + L + +
Sbjct: 688 MIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKM-QPV 746
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTL-LYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
P+ V+Y + + KG +D + L+ KG+ + T+N L+ GF GR +
Sbjct: 747 SSVPNQVTYGCFLD-ILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEE 805
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
A ++ M+ V P+ +Y ++ L KKA+EL M K I PD + LI
Sbjct: 806 ASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIH 865
Query: 277 GFVNEGNLEEAKRWYNK 293
G G + +A N+
Sbjct: 866 GCCVAGEMGKATELRNE 882
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 55/110 (50%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ + +YN +I+ F +G ++ A+ L+ M G+ D IT+ T++ A
Sbjct: 782 GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKA 841
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPD 267
++W +M +RP+ +YN + G + + KA EL EM + + P+
Sbjct: 842 IELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 59/117 (50%), Gaps = 4/117 (3%)
Query: 201 FNTLLLGFYSNGRFADAEKIWETMVN-MNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
F+ L+ + + R D +++ M+ +++ P VR+ +A L GL + A+EL +M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLEEAKRW---YNKSGCGMNKAIFKLLVPFVCEK 313
S I PDV+ + +I+ +L AK +GC +N + +L+ +C+K
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKK 275
>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
Length = 668
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 175/349 (50%), Gaps = 14/349 (4%)
Query: 18 ATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTN--TGIYTGTVQRLANAKRFRW 75
AT VI I K+ R+ D FK +++G + N T YT ++ L A+R+
Sbjct: 314 ATNTTLCNIVINSICKQG---RVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWND 370
Query: 76 IEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL- 134
+E+L+ + E I + + + E A + ++M C V+++NAL+
Sbjct: 371 AKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVN 430
Query: 135 GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGI 194
G CV D LF+ +P K P+ ++Y T++ + LD+A L+ EM +
Sbjct: 431 GFCVQGH-IDSALELFRSMPCK----PNTITYTTLLTGLCNAERLDAAAELVAEMLHRDC 485
Query: 195 RLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALE 254
+++TFN L+ F G +A ++ E M+ PN+ +YN DG+ + ++ ALE
Sbjct: 486 PPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALE 545
Query: 255 LVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS---GCGMNKAIFKLLVPFVC 311
L+ + SK ++PDV TF ++I E +EEA + ++ + G ++ ++ +C
Sbjct: 546 LLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLC 605
Query: 312 EKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVEL 360
++ ++D A + S C+ +++ ++++ LA+E ++EA++L+ +
Sbjct: 606 KRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLAREGLLKEAQDLLSM 654
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 137/336 (40%), Gaps = 8/336 (2%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
+I G+ +E + D + G + +T YT ++ L +KR+ +EE+ +
Sbjct: 218 IINGMCREGRVDDARDLLNRLFSYG-CQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEK 276
Query: 87 KDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEV 146
+ E LI + + M E A +V +M C N ++ + + D+
Sbjct: 277 NCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDA 336
Query: 147 DGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLL 206
++ G PD +SY T++K + A LL EM + + +TFNT +
Sbjct: 337 FKFLNNM-GSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFIC 395
Query: 207 GFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINP 266
G A + E M V +YNA ++G ++ ALEL RS P
Sbjct: 396 ILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALEL---FRSMPCKP 452
Query: 267 DVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLC 323
+ T+ L+ G N L+ A + C N F +LV F C+KG LD A L
Sbjct: 453 NTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELV 512
Query: 324 KRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
++ C + + D + K+ E+A EL+
Sbjct: 513 EQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLH 548
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 118/265 (44%), Gaps = 7/265 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+A Y + + AR++ MP ++ L+ + + + L D+ +
Sbjct: 116 LVAGYCRYGHLDAARRLIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRR- 171
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G +P++V+Y +++A + A +L EM KG +++T+N ++ G GR DA
Sbjct: 172 GCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 231
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ + + +P+ SY L GL K+ EL EM K P+ TF LI+
Sbjct: 232 RDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRF 291
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
F G +E A + + C N + +++ +C++G +D AF S C D
Sbjct: 292 FCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPD 351
Query: 335 QAPLQLVVDRLAKELRVEEAKELVE 359
V+ L + R +AKEL++
Sbjct: 352 TISYTTVLKGLCRAERWNDAKELLK 376
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 128/304 (42%), Gaps = 40/304 (13%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSY-- 166
++AR + + + C+ +S+ LL SK++D+V+ LF ++ K P+ V++
Sbjct: 229 DDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEK-NCMPNEVTFDM 287
Query: 167 ---------------------------------NTIIKAFVDKGSLDSANTLLYEMEKKG 193
N +I + +G +D A L M G
Sbjct: 288 LIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYG 347
Query: 194 IRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKAL 253
D I++ T+L G R+ DA+++ + MV N PN ++N + L + ++A+
Sbjct: 348 CNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAI 407
Query: 254 ELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKAIFKLLVPFVCEK 313
L+ +M+ V T+ AL+ GF +G+++ A + C N + L+ +C
Sbjct: 408 MLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCKPNTITYTTLLTGLCNA 467
Query: 314 GDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV----ELGKTNSYCRY 369
LD A L C + ++V+ ++ ++EA ELV E G T + Y
Sbjct: 468 ERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITY 527
Query: 370 NLKF 373
N F
Sbjct: 528 NTLF 531
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 102/235 (43%), Gaps = 41/235 (17%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G D+ +YNT++ + G LD+A L+ M + D T+ L+ GR ADA
Sbjct: 105 GSPVDVFAYNTLVAGYCRYGHLDAARRLIGSMP---VAPDAYTYTPLIRVLCDRGRVADA 161
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ + M+ +PNV +Y L+ + ++A+ ++ EMR+K P++ T+ +I G
Sbjct: 162 LSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIING 221
Query: 278 FVNEGNLEEA-----------------------------KRWYN---------KSGCGMN 299
EG +++A KRW + + C N
Sbjct: 222 MCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPN 281
Query: 300 KAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA 354
+ F +L+ F C G ++ A + ++ C + +V++ + K+ RV++A
Sbjct: 282 EVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDA 336
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 96/212 (45%), Gaps = 3/212 (1%)
Query: 54 RTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTAR-LIALYGKAAMFENAR 112
+ NT YT + L NA+R E++ + ++D T L+ + + + A
Sbjct: 451 KPNTITYTTLLTGLCNAERLDAAAELVA-EMLHRDCPPNVVTFNVLVNFFCQKGFLDEAI 509
Query: 113 KVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKA 172
++ ++M C ++++N L ++ L L K G+ PD++++++II
Sbjct: 510 ELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSK-GVSPDVITFSSIIGI 568
Query: 173 FVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPN 232
+ ++ A + + + G+R + +N +LLG +A MV+ PN
Sbjct: 569 LSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPN 628
Query: 233 VRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+Y ++GLA E K+A +L+ + S+ +
Sbjct: 629 ESTYIILIEGLAREGLLKEAQDLLSMLCSRGV 660
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/171 (19%), Positives = 74/171 (43%), Gaps = 6/171 (3%)
Query: 191 KKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTK 250
+ G D+ L+ GR +DA ++ +V +YN + G
Sbjct: 68 RDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLD 127
Query: 251 KALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLV 307
A L+G M + PD +T+ LI+ + G + +A + + GC N + +L+
Sbjct: 128 AARRLIGSM---PVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLL 184
Query: 308 PFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
+C+ + A + ++ C + ++++ + +E RV++A++L+
Sbjct: 185 EAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLL 235
>gi|449485877|ref|XP_004157297.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g07740, mitochondrial-like [Cucumis sativus]
Length = 460
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 141/308 (45%), Gaps = 39/308 (12%)
Query: 53 FRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENAR 112
F+ + Y+ + +LA ++RF +E IL H + E LI YGKA + E
Sbjct: 77 FKHHYPSYSSLIYKLARSRRFEAVETILGHLRNRNIRCNETLFVALIQHYGKAHLVEKGI 136
Query: 113 KVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKA 172
++F +MP NC +T+ SFN LL V+ +F + +F+ +++G P+ VSYN +IK
Sbjct: 137 ELFHQMPSFNCFRTLQSFNVLLNTLVDCDQFSKASEIFQQ-AYEMGFRPNSVSYNIMIKG 195
Query: 173 FVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPN 232
++ KG + A L EM +KG++ ++T+N+ L G A +++ M PN
Sbjct: 196 WIKKGGWEQACNLFDEMLEKGVQPSVVTYNSXLGVLCRKGEMDTALCLFKNMTEKGHHPN 255
Query: 233 VRSYNARLDG---LAIEKQTKKAL--------------------------------ELVG 257
+Y ++G + K+ KK + L+
Sbjct: 256 AVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKLRPVNYGVLMTHLGKTGNIDEMESLLN 315
Query: 258 EMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKG 314
EM+ + + PDV T+ L+ EG + +A + K GC N A +++++ C G
Sbjct: 316 EMKKRRLKPDVVTYNILVNYLCKEGKVGDAYKVLVKMQVGGCDPNAATYRMMIDGYCNAG 375
Query: 315 DLDFAFNL 322
D D A +
Sbjct: 376 DFDGAMKI 383
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 125/295 (42%), Gaps = 41/295 (13%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I+ K + +++ ++ F + FRT + + L + +F EI Q+
Sbjct: 121 ALIQHYGKAHLVEKGIELFHQMPSFNCFRTLQS-FNVLLNTLVDCDQFSKASEIF--QQA 177
Query: 86 YKDISKEGFTARLIALYG--KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKF 143
Y+ + + I + G K +E A +FDEM + + +V+++N+ LG +
Sbjct: 178 YEMGFRPNSVSYNIMIKGWIKKGGWEQACNLFDEMLEKGVQPSVVTYNSXLGVLCRKGEM 237
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKA--FVDK------------------------- 176
D LFK++ K G P+ V+Y +++ F+ K
Sbjct: 238 DTALCLFKNMTEK-GHHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKLRPVNYGV 296
Query: 177 --------GSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
G++D +LL EM+K+ ++ D++T+N L+ G+ DA K+ M
Sbjct: 297 LMTHLGKTGNIDEMESLLNEMKKRRLKPDVVTYNILVNYLCKEGKVGDAYKVLVKMQVGG 356
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
PN +Y +DG A++++ M P + TF +L+ G + N
Sbjct: 357 CDPNAATYRMMIDGYCNAGDFDGAMKILNAMLMSGHYPHLKTFASLVVGLLKGEN 411
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 81/183 (44%), Gaps = 4/183 (2%)
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
E LF++ H+ G + SY+++I ++ T+L + + IR + F L
Sbjct: 64 EALALFENY-HEKGFKHHYPSYSSLIYKLARSRRFEAVETILGHLRNRNIRCNETLFVAL 122
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+ + +++ M + N ++S+N L+ L Q KA E+ +
Sbjct: 123 IQHYGKAHLVEKGIELFHQMPSFNCFRTLQSFNVLLNTLVDCDQFSKASEIFQQAYEMGF 182
Query: 265 NPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFN 321
P+ ++ +IKG++ +G E+A ++ + G + + + +C KG++D A
Sbjct: 183 RPNSVSYNIMIKGWIKKGGWEQACNLFDEMLEKGVQPSVVTYNSXLGVLCRKGEMDTALC 242
Query: 322 LCK 324
L K
Sbjct: 243 LFK 245
>gi|357150324|ref|XP_003575420.1| PREDICTED: pentatricopeptide repeat-containing protein At4g36680,
mitochondrial-like [Brachypodium distachyon]
Length = 468
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 141/299 (47%), Gaps = 6/299 (2%)
Query: 64 VQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVF-DEMPGRN 122
+RL+ A RF E +L E + ++ Y AA+ E A + F P
Sbjct: 79 ARRLSRAGRFADAEALL--SSHIPASPTEPHLSAILCSYASAALPEKALEAFRSAAPSLP 136
Query: 123 CEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSA 182
+ + FNALL A V ++ V LF +L + I PD SY ++KA A
Sbjct: 137 SPISPMPFNALLSAFVRCRRHRRVPVLFTELSKEFSITPDATSYGILVKAHCMVRHDAKA 196
Query: 183 NTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDG 242
+ +L +M ++GI F T++ Y + +AE +W+ M+ +P+ +YN +
Sbjct: 197 HEVLAQMREEGISPTTTIFTTMIDSMYKQKKIEEAETLWKQMLESGCKPDQATYNVKAMN 256
Query: 243 LAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMN 299
+ + + L ++ EM + + PD T+ L+ + G +E+AK Y+ GC N
Sbjct: 257 FGLHGKPEDVLLVMAEMEAAGVKPDTITYNFLMTSYCKNGKVEDAKGLYHSLGAKGCSPN 316
Query: 300 KAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
A +K ++ ++ GD D A + + + S+ + D ++ V+ LAK +V EAK+++
Sbjct: 317 AATYKHMMAYLFAHGDFDAAMKIFRESLSKHKVPDFKTMKGFVEGLAKGGKVAEAKDVI 375
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 57/103 (55%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD ++YN ++ ++ G ++ A L + + KG + T+ ++ +++G F A
Sbjct: 277 GVKPDTITYNFLMTSYCKNGKVEDAKGLYHSLGAKGCSPNAATYKHMMAYLFAHGDFDAA 336
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMR 260
KI+ ++ + P+ ++ ++GLA + +A +++ E++
Sbjct: 337 MKIFRESLSKHKVPDFKTMKGFVEGLAKGGKVAEAKDVISEVK 379
>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
Length = 715
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 144/336 (42%), Gaps = 8/336 (2%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
+I G+ +E + + + S G F+ +T YT ++ L AKR+ +EE+ +
Sbjct: 252 IINGMCREGRVDDAREFLNRLSSYG-FQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEK 310
Query: 87 KDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEV 146
+ E L+ + + M E A +V ++M G C N ++ + D+
Sbjct: 311 NCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDA 370
Query: 147 DGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLL 206
++ G PD +SY T++K + A LL EM +K + +TFNT +
Sbjct: 371 FQFLNNM-GSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFIC 429
Query: 207 GFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINP 266
G A + E M N+ +YNA ++G ++ + ALEL M K P
Sbjct: 430 ILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---P 486
Query: 267 DVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLC 323
+ T+ L+ G N L+ A + C N F +LV F C+KG +D A L
Sbjct: 487 NTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELV 546
Query: 324 KRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
++ C + ++D + K+ EEA EL+
Sbjct: 547 EQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLH 582
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 172/353 (48%), Gaps = 14/353 (3%)
Query: 12 FSTTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRF--RTNTGIYTGTVQRLAN 69
S A VI I K+ R+ D F+ +++G + +T YT ++ L
Sbjct: 342 MSGHGCAANTTLCNIVINTICKQG---RVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCR 398
Query: 70 AKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLS 129
A+R+ +E+L+ + E I + + + E A + ++M CE +++
Sbjct: 399 AERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVT 458
Query: 130 FNALL-GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
+NAL+ G CV + D LF +P K P+ ++Y T++ + LD+A LL E
Sbjct: 459 YNALVNGFCVQGR-VDSALELFYSMPCK----PNTITYTTLLTGLCNAERLDAAAELLAE 513
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
M +K +++TFN L+ F G +A ++ E M+ PN+ +YN LDG+ +
Sbjct: 514 MLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCN 573
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA-KRWYNKSGCGMNK--AIFKL 305
+++ALEL+ + S ++PD+ T+ ++I E +EEA K ++ GM I+
Sbjct: 574 SEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNK 633
Query: 306 LVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
++ +C++ + D A + S C+ ++ +++ LA E ++E ++L+
Sbjct: 634 ILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLL 686
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 120/265 (45%), Gaps = 7/265 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+A Y + + AR++ MP ++ ++ + + E L D+ H+
Sbjct: 150 LVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHR- 205
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G +P +V+Y +++A A +L EM KG +++T+N ++ G GR DA
Sbjct: 206 GCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 265
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ + + +P+ SY L GL K+ + EL EM K P+ TF L++
Sbjct: 266 REFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRF 325
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
F G +E A + + GC N + +++ +C++G +D AF S C D
Sbjct: 326 FCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPD 385
Query: 335 QAPLQLVVDRLAKELRVEEAKELVE 359
V+ L + R E+AKEL++
Sbjct: 386 TISYTTVLKGLCRAERWEDAKELLK 410
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 103/235 (43%), Gaps = 41/235 (17%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G D+ +YNT++ + G LD+A L+ M + D T+ ++ G GR +A
Sbjct: 139 GTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEA 195
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ + M++ +P+V +Y L+ + +A+E++ EMR+K P++ T+ +I G
Sbjct: 196 LSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIING 255
Query: 278 FVNEGNLEE-----------------------------AKRWYN---------KSGCGMN 299
EG +++ AKRW + + C N
Sbjct: 256 MCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPN 315
Query: 300 KAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA 354
+ F +LV F C G ++ A + ++ C + +V++ + K+ RV++A
Sbjct: 316 EVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDA 370
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 102/216 (47%), Gaps = 11/216 (5%)
Query: 54 RTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTAR-LIALYGKAAMFENAR 112
+ NT YT + L NA+R E+L Q KD + T L++ + + + + A
Sbjct: 485 KPNTITYTTLLTGLCNAERLDAAAELLAEMLQ-KDCAPNVVTFNVLVSFFCQKGLMDEAI 543
Query: 113 KVFDEMPGRNCEQTVLSFNALLGA----CVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
++ ++M C ++++N LL C + + + + GL + G+ PD+V+Y++
Sbjct: 544 ELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSN-----GVSPDIVTYSS 598
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
II + ++ A + + ++ G+R + +N +LL A + MV+
Sbjct: 599 IIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNG 658
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
PN +Y ++GLA E K+ +L+ E+ S+ +
Sbjct: 659 CMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 694
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 79/188 (42%), Gaps = 8/188 (4%)
Query: 182 ANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLD 241
A L+ +G D+ L+ GR +DA ++ +V +YN +
Sbjct: 93 AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVA 152
Query: 242 GLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGM 298
G Q A L+ M + PD +T+ +I+G + G + EA + GC
Sbjct: 153 GYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQP 209
Query: 299 NKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
+ + +L+ VC+ A + ++ C + ++++ + +E RV++A+E
Sbjct: 210 SVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREF- 268
Query: 359 ELGKTNSY 366
L + +SY
Sbjct: 269 -LNRLSSY 275
>gi|224063295|ref|XP_002301082.1| predicted protein [Populus trichocarpa]
gi|222842808|gb|EEE80355.1| predicted protein [Populus trichocarpa]
Length = 509
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 172/343 (50%), Gaps = 10/343 (2%)
Query: 21 PKFIG--SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEE 78
PKFI + + I E + + ++ F + F N Y+ + +LA AK+F+ ++
Sbjct: 45 PKFISHETAVNLIKHERDPQHALEIFNLVVEQKGFNHNHATYSTIIDKLARAKKFQAVDA 104
Query: 79 ILEHQKQYKDIS-KEGFTARLIALYGKAAMFENARKVFDEM-PGRNCEQTVLSFNALLGA 136
+L Q Y+ E L+ + K++ FE ++F+++ P + ++ + + L
Sbjct: 105 LLR-QMMYETCKFHESLFLNLMKYFAKSSEFERVVEMFNKIQPIVREKPSLKAISTCLNL 163
Query: 137 CVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRL 196
V SK+ D + G DL ++P+ +N IK G L+SA ++ EM+K I
Sbjct: 164 LVESKQVDLLRGFLLDLNKDHMLKPNTCIFNIFIKYHCKSGDLESAFAVVKEMKKSSISY 223
Query: 197 -DLITFNTLLLGFYSNGRFADAEKIWETMVNMN-VRPNVRSYNARLDGLAIEKQTKKALE 254
+LIT++TL+ G +GR +A +++E MV+ + + P+ +YN ++G + + +A +
Sbjct: 224 PNLITYSTLMDGLCESGRLKEAIELFEEMVSKDQILPDALTYNVLINGFSCWGKVDRAKK 283
Query: 255 LVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS---GCGMNKAIFKLLVPFVC 311
++ M+S +P+VF + AL+ GF EG LEEA + + G + + +L+ + C
Sbjct: 284 IMEFMKSNGCSPNVFNYSALMSGFCKEGRLEEAMDAFEEMKIFGLKQDTVGYTILINYFC 343
Query: 312 EKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA 354
G +D A L + +C D + +++ E R EEA
Sbjct: 344 RFGRIDEAMALLEEMKETKCKADIVTVNVLLRGFCGEGRTEEA 386
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 122/283 (43%), Gaps = 11/283 (3%)
Query: 56 NTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLI----ALYGKAAMFENA 111
N Y+ + L + R + E+ E I + T ++ + +GK + A
Sbjct: 225 NLITYSTLMDGLCESGRLKEAIELFEEMVSKDQILPDALTYNVLINGFSCWGKV---DRA 281
Query: 112 RKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIK 171
+K+ + M C V +++AL+ + +E F+++ G++ D V Y +I
Sbjct: 282 KKIMEFMKSNGCSPNVFNYSALMSGFCKEGRLEEAMDAFEEM-KIFGLKQDTVGYTILIN 340
Query: 172 AFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRP 231
F G +D A LL EM++ + D++T N LL GF GR +A + + + +
Sbjct: 341 YFCRFGRIDEAMALLEEMKETKCKADIVTVNVLLRGFCGEGRTEEALGMLNRLSSEGIYL 400
Query: 232 NVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA-KRW 290
N SY L+ L + KALEL+G S+ P T L+ G G ++A
Sbjct: 401 NKASYRIVLNSLCQKGDLDKALELLGLTLSRGFVPHHATSNELLVGLCKAGMADDAVVAL 460
Query: 291 YNKSGCGM--NKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERC 331
Y + G + + LLV FVC + L AF L + C
Sbjct: 461 YGLAEMGFKPEQDSWALLVEFVCRERKLLLAFELLDELTANEC 503
>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
Length = 624
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 166/365 (45%), Gaps = 35/365 (9%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
++RG+ + N L++ + ++G + IY + + AK F + L +
Sbjct: 16 LLRGLCRSNQLEKARQLLGRMKEMGCV-PDDAIYNALISGYSKAKDFGQAFKFLAEMVKN 74
Query: 87 KDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE- 145
+ ++ KA ++A K+ DEM + C + ++N ++ +K DE
Sbjct: 75 HCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEA 134
Query: 146 --------VDGLFKDLP----------------------HKLGIEPDLVSYNTIIKAFVD 175
V G F D+ ++ + PD+VSY T+I
Sbjct: 135 KKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVTPDVVSYTTVINGLCK 194
Query: 176 KGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRS 235
G LDSA+ +L +M +G D++T+++L+ GF G A + ++M+ + RPN+ +
Sbjct: 195 SGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVA 254
Query: 236 YNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK-- 293
YN+ L L KA +++ EM + PDV ++ A I G +++AK +++
Sbjct: 255 YNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMV 314
Query: 294 -SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVE 352
GC N + + +LV +C+K +LD A L ++ + +VD +++D L K R +
Sbjct: 315 ERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFD 374
Query: 353 EAKEL 357
EA L
Sbjct: 375 EACAL 379
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 111/242 (45%), Gaps = 1/242 (0%)
Query: 118 MPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKG 177
M ++C+ +F LL S + ++ L + ++G PD YN +I +
Sbjct: 1 MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRM-KEMGCVPDDAIYNALISGYSKAK 59
Query: 178 SLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYN 237
A L EM K ++T+ ++ G GR DA K+ + M + PN+ +YN
Sbjct: 60 DFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYN 119
Query: 238 ARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCG 297
++GL E++ +A +++ EM + PDV T+ + IKG ++EA+++ +
Sbjct: 120 VIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVT 179
Query: 298 MNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
+ + ++ +C+ GDLD A + + + C D ++D K VE A L
Sbjct: 180 PDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGL 239
Query: 358 VE 359
++
Sbjct: 240 LD 241
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 137/341 (40%), Gaps = 59/341 (17%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYT---GTVQRLANAKRFRWIEEILEH 82
S+I G K ++R + LG R N Y G + RL + I +
Sbjct: 222 SLIDGFCKGGEVERAMGLLDSMLKLG-CRPNMVAYNSLLGALHRLGH---------IGKA 271
Query: 83 QKQYKDISKEGFTARLIALYG------KAAMFENARKVFDEMPGRNC------------- 123
+ ++ + GFT +++ KA + A+ VFD M R C
Sbjct: 272 EDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEE 331
Query: 124 --------------EQT--------VLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEP 161
EQ +L + LL +FDE LF + + EP
Sbjct: 332 LCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEP 391
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
D+ YN ++ + + +D A + +M ++ +++T+N L+ G + R +DAE +
Sbjct: 392 DVFFYNVMLDSHCKRRQIDKALQIHKQMLERNC-CNVVTWNILVHGLCVDDRLSDAETML 450
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
TMV+ P+ +Y +D + ++ ALEL E PDV T+ ALI G V+E
Sbjct: 451 LTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHE 510
Query: 282 GNLEEAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
EEA + K ++ A++ ++ E G D L
Sbjct: 511 NMAEEAYLLFTK----LDVALWNAMILGYAENGSGDLGLKL 547
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 93/220 (42%), Gaps = 33/220 (15%)
Query: 102 YGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIE 160
+ K + A ++ +M RNC V+++N L+ G CV+ + D L + G
Sbjct: 403 HCKRRQIDKALQIHKQMLERNC-CNVVTWNILVHGLCVDDRLSDAETMLLTMVDE--GFI 459
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITF------------------- 201
PD V+Y T++ A G +A L E K G D++T+
Sbjct: 460 PDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLL 519
Query: 202 ---------NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQT-KK 251
N ++LG+ NG K++ ++ +V PN R++ + G ++ ++ K
Sbjct: 520 FTKLDVALWNAMILGYAENGSGDLGLKLFVELIESDVEPNARTFGKEISGKLVKAESLGK 579
Query: 252 ALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY 291
A L PD+F LI F G+LEEA+R +
Sbjct: 580 ARGLFDRAVKGGFFPDLFVANTLIDVFAKCGDLEEARRIF 619
>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
Length = 684
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 144/336 (42%), Gaps = 8/336 (2%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
+I G+ +E + + + S G F+ +T YT ++ L AKR+ +EE+ +
Sbjct: 221 IINGMCREGRVDDAREFLNRLSSYG-FQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEK 279
Query: 87 KDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEV 146
+ E L+ + + M E A +V ++M G C N ++ + D+
Sbjct: 280 NCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDA 339
Query: 147 DGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLL 206
++ G PD +SY T++K + A LL EM +K + +TFNT +
Sbjct: 340 FQFLNNM-GSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFIC 398
Query: 207 GFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINP 266
G A + E M N+ +YNA ++G ++ + ALEL M K P
Sbjct: 399 ILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---P 455
Query: 267 DVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLC 323
+ T+ L+ G N L+ A + C N F +LV F C+KG +D A L
Sbjct: 456 NTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELV 515
Query: 324 KRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
++ C + ++D + K+ EEA EL+
Sbjct: 516 EQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLH 551
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 172/353 (48%), Gaps = 14/353 (3%)
Query: 12 FSTTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRF--RTNTGIYTGTVQRLAN 69
S A VI I K+ R+ D F+ +++G + +T YT ++ L
Sbjct: 311 MSGHGCAANTTLCNIVINTICKQG---RVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCR 367
Query: 70 AKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLS 129
A+R+ +E+L+ + E I + + + E A + ++M CE +++
Sbjct: 368 AERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVT 427
Query: 130 FNALL-GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
+NAL+ G CV + D LF +P K P+ ++Y T++ + LD+A LL E
Sbjct: 428 YNALVNGFCVQGR-VDSALELFYSMPCK----PNTITYTTLLTGLCNAERLDAAAELLAE 482
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
M +K +++TFN L+ F G +A ++ E M+ PN+ +YN LDG+ +
Sbjct: 483 MLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCN 542
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA-KRWYNKSGCGMNK--AIFKL 305
+++ALEL+ + S ++PD+ T+ ++I E +EEA K ++ GM I+
Sbjct: 543 SEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNK 602
Query: 306 LVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
++ +C++ + D A + S C+ ++ +++ LA E ++E ++L+
Sbjct: 603 ILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLL 655
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 120/265 (45%), Gaps = 7/265 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+A Y + + AR++ MP ++ ++ + + E L D+ H+
Sbjct: 119 LVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHR- 174
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G +P +V+Y +++A A +L EM KG +++T+N ++ G GR DA
Sbjct: 175 GCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 234
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ + + +P+ SY L GL K+ + EL EM K P+ TF L++
Sbjct: 235 REFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRF 294
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
F G +E A + + GC N + +++ +C++G +D AF S C D
Sbjct: 295 FCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPD 354
Query: 335 QAPLQLVVDRLAKELRVEEAKELVE 359
V+ L + R E+AKEL++
Sbjct: 355 TISYTTVLKGLCRAERWEDAKELLK 379
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 103/235 (43%), Gaps = 41/235 (17%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G D+ +YNT++ + G LD+A L+ M + D T+ ++ G GR +A
Sbjct: 108 GTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEA 164
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ + M++ +P+V +Y L+ + +A+E++ EMR+K P++ T+ +I G
Sbjct: 165 LSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIING 224
Query: 278 FVNEGNLEE-----------------------------AKRWYN---------KSGCGMN 299
EG +++ AKRW + + C N
Sbjct: 225 MCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPN 284
Query: 300 KAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA 354
+ F +LV F C G ++ A + ++ C + +V++ + K+ RV++A
Sbjct: 285 EVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDA 339
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 102/216 (47%), Gaps = 11/216 (5%)
Query: 54 RTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTAR-LIALYGKAAMFENAR 112
+ NT YT + L NA+R E+L Q KD + T L++ + + + + A
Sbjct: 454 KPNTITYTTLLTGLCNAERLDAAAELLAEMLQ-KDCAPNVVTFNVLVSFFCQKGLMDEAI 512
Query: 113 KVFDEMPGRNCEQTVLSFNALLGA----CVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
++ ++M C ++++N LL C + + + + GL + G+ PD+V+Y++
Sbjct: 513 ELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSN-----GVSPDIVTYSS 567
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
II + ++ A + + ++ G+R + +N +LL A + MV+
Sbjct: 568 IIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNG 627
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
PN +Y ++GLA E K+ +L+ E+ S+ +
Sbjct: 628 CMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 663
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 85/203 (41%), Gaps = 8/203 (3%)
Query: 167 NTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVN 226
N ++ + + L A L+ +G D+ L+ GR +DA ++
Sbjct: 47 NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAER 106
Query: 227 MNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEE 286
+V +YN + G Q A L+ M + PD +T+ +I+G + G + E
Sbjct: 107 SGTAVDVFAYNTLVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGE 163
Query: 287 AKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVD 343
A + GC + + +L+ VC+ A + ++ C + ++++
Sbjct: 164 ALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIIN 223
Query: 344 RLAKELRVEEAKELVELGKTNSY 366
+ +E RV++A+E L + +SY
Sbjct: 224 GMCREGRVDDAREF--LNRLSSY 244
>gi|147843358|emb|CAN80524.1| hypothetical protein VITISV_030537 [Vitis vinifera]
Length = 714
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 173/361 (47%), Gaps = 41/361 (11%)
Query: 13 STTATAT------GPKFIG--SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTV 64
+T AT T PKFI S I I +E + +R ++ F + ++ F N Y +
Sbjct: 111 ATEATTTMVEPRKKPKFISHESAINLIKRETDPQRALEIFNRVAEQRGFSHNNATYATIL 170
Query: 65 QRLANAKRFRWIEEILEHQKQYKDIS-KEGFTARLIALYGKAAMFENARKVFDEMPGRNC 123
+LA +K+F+ I+ +L HQ Y+ EG L+ + K ++ E ++FD +
Sbjct: 171 HKLAKSKKFQAIDAVL-HQMTYETCKFHEGIFLNLMKHFSKLSLHERVVEMFDAIXPIVR 229
Query: 124 EQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSAN 183
E+ L + C+N L +E + S G +DSA
Sbjct: 230 EKPSLK---AISTCLN-----------------LLVESNQSSITA------KNGDIDSAF 263
Query: 184 TLLYEMEKKGIRL-DLITFNTLLLGFYSNGRFADAEKIWETMVNMN-VRPNVRSYNARLD 241
++ EM+K + +LIT++TL+ G +GR +A +++E MV+ + + P+ +YNA ++
Sbjct: 264 EVVEEMKKSHVSYPNLITYSTLINGLCGSGRLKEAIELFEEMVSKDQILPDALTYNALIN 323
Query: 242 GLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS---GCGM 298
G + +AL+++ M+ NP+VF + AL+ GF EG LEEAK +++ G
Sbjct: 324 GFCHGXKVDRALKIMEFMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMKSLGLKP 383
Query: 299 NKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
+ + L+ F C G +D A L K +C D +++ L +E R EEA ++
Sbjct: 384 DTVGYTTLINFFCRAGRVDEAMELLKDMXENKCRADTVTFNVILGGLCREGRFEEAXGML 443
Query: 359 E 359
E
Sbjct: 444 E 444
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 119/275 (43%), Gaps = 13/275 (4%)
Query: 56 NTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTAR-LIALYGKAAMFENARKV 114
N Y+ + L + R + E+ E I + T LI + + A K+
Sbjct: 278 NLITYSTLINGLCGSGRLKEAIELFEEMVSKDQILPDALTYNALINGFCHGXKVDRALKI 337
Query: 115 FDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFV 174
+ M C V +++AL+ + +E +F ++ LG++PD V Y T+I F
Sbjct: 338 MEFMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEM-KSLGLKPDTVGYTTLINFFC 396
Query: 175 DKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVR 234
G +D A LL +M + R D +TFN +L G GRF +A + E + V N
Sbjct: 397 RAGRVDEAMELLKDMXENKCRADTVTFNVILGGLCREGRFEEAXGMLERLPYEGVYLNKA 456
Query: 235 SYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS 294
SY L+ L E + +KA +LVG M + + P T L+ G + +A +
Sbjct: 457 SYRIVLNSLCREGELQKATQLVGLMLGRGVLPHFATSNELLVHLCEAGKVGDAVM----A 512
Query: 295 GCGMNKAIFK-------LLVPFVCEKGDLDFAFNL 322
G+ + FK LLV +C + L AF L
Sbjct: 513 LLGLLELGFKPEPNSWALLVELICRERKLLPAFEL 547
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 81/171 (47%), Gaps = 2/171 (1%)
Query: 93 GFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKD 152
G+T LI + +A + A ++ +M C ++FN +LG +F+E G+ +
Sbjct: 387 GYTT-LINFFCRAGRVDEAMELLKDMXENKCRADTVTFNVILGGLCREGRFEEAXGMLER 445
Query: 153 LPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNG 212
LP++ G+ + SY ++ + +G L A L+ M +G+ T N LL+ G
Sbjct: 446 LPYE-GVYLNKASYRIVLNSLCREGELQKATQLVGLMLGRGVLPHFATSNELLVHLCEAG 504
Query: 213 RFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
+ DA ++ + +P S+ ++ + E++ A EL+ ++ +E
Sbjct: 505 KVGDAVMALLGLLELGFKPEPNSWALLVELICRERKLLPAFELLDDLVIQE 555
>gi|297812025|ref|XP_002873896.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319733|gb|EFH50155.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 507
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 181/359 (50%), Gaps = 12/359 (3%)
Query: 11 SFSTTATATGPKFIG--SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLA 68
S ST T KFI S + + +E + +R +D F K+S F N Y+ + L
Sbjct: 42 SISTMETNPKTKFISHESTVSLMKRERDPQRALDIFNKASQQKGFNHNNATYSVLLDNLV 101
Query: 69 NAKRFRWIEEILEHQKQYKDIS-KEGFTARLIALYGKAAMFENARKVFD--EMPGRNCEQ 125
K+F ++ IL HQ +Y+ +E L+ + + + + ++F+ ++ R +
Sbjct: 102 RHKKFLAVDAIL-HQMKYETCRFQESLFLNLMRHFSRFDLHDKVMEMFNLIQVIAR-VKP 159
Query: 126 TVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTL 185
++ + + L ++S + D L H L ++P+ +N ++K G +DSA +
Sbjct: 160 SLNAISTCLNLLIDSGEVDLARKLLLYAKHNLALQPNTCIFNILVKHHCKNGDIDSAFRV 219
Query: 186 LYEMEKKGIRL-DLITFNTLLLGFYSNGRFADAEKIWETMVN-MNVRPNVRSYNARLDGL 243
+ EM++ GI + IT++TL+ ++ R +A +++E M++ + P+ +N ++G
Sbjct: 220 VEEMKRSGISYPNSITYSTLMDCLFAQSRSKEAVELFEDMISKRGISPDPVIFNVMINGF 279
Query: 244 AIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNK 300
+ ++A ++ M+ NP+V+ + AL+ GF EG ++EAK+ ++ K+G ++
Sbjct: 280 CRSGEVERAKMILDFMKKNGCNPNVYNYSALMNGFCKEGKIQEAKQVFDEVKKTGLKLDT 339
Query: 301 AIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ L+ +C G++D A L + RC D +++ L+ E R EEA ++++
Sbjct: 340 VGYTTLMNCLCRNGEIDEAMKLLGEMKASRCRADALTYNVILRGLSSEGRSEEALQMLD 398
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 116/226 (51%), Gaps = 4/226 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCE-QTVLSFNALLGACVNSKKFDEVDGLFKDLPHK 156
L+ + K ++A +V +EM ++++ L+ + E LF+D+ K
Sbjct: 203 LVKHHCKNGDIDSAFRVVEEMKRSGISYPNSITYSTLMDCLFAQSRSKEAVELFEDMISK 262
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
GI PD V +N +I F G ++ A +L M+K G ++ ++ L+ GF G+ +
Sbjct: 263 RGISPDPVIFNVMINGFCRSGEVERAKMILDFMKKNGCNPNVYNYSALMNGFCKEGKIQE 322
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
A+++++ + ++ + Y ++ L + +A++L+GEM++ D T+ +++
Sbjct: 323 AKQVFDEVKKTGLKLDTVGYTTLMNCLCRNGEIDEAMKLLGEMKASRCRADALTYNVILR 382
Query: 277 GFVNEGNLEEAKRWYNKSGC---GMNKAIFKLLVPFVCEKGDLDFA 319
G +EG EEA + ++ GC +NK +++++ +C G+L+ A
Sbjct: 383 GLSSEGRSEEALQMLDQWGCEGVHLNKGSYRIILNALCCNGELEKA 428
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 115/250 (46%), Gaps = 6/250 (2%)
Query: 73 FRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNA 132
FR +EE+ Y + ++ + L+ ++ E D + R + FN
Sbjct: 217 FRVVEEMKRSGISYPN--SITYSTLMDCLFAQSRSKEAVELFEDMISKRGISPDPVIFNV 274
Query: 133 LLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKK 192
++ S + + + D K G P++ +Y+ ++ F +G + A + E++K
Sbjct: 275 MINGFCRSGEVERAKMIL-DFMKKNGCNPNVYNYSALMNGFCKEGKIQEAKQVFDEVKKT 333
Query: 193 GIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKA 252
G++LD + + TL+ NG +A K+ M R + +YN L GL+ E ++++A
Sbjct: 334 GLKLDTVGYTTLMNCLCRNGEIDEAMKLLGEMKASRCRADALTYNVILRGLSSEGRSEEA 393
Query: 253 LELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW---YNKSGCGMNKAIFKLLVPF 309
L+++ + + ++ + ++ ++ G LE+A ++ +K G + A + LV
Sbjct: 394 LQMLDQWGCEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSKRGIWPHHATWNELVVR 453
Query: 310 VCEKGDLDFA 319
+CE G+ +
Sbjct: 454 LCESGNTEIG 463
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 55/281 (19%), Positives = 112/281 (39%), Gaps = 21/281 (7%)
Query: 1 MSFP-----SRLLSCSFSTTATATGPKFIGSVI--RGIYKENNL-KRLVDKFKKSSDLGR 52
+S+P S L+ C F+ + + + +I RGI + + +++ F +S ++ R
Sbjct: 228 ISYPNSITYSTLMDCLFAQSRSKEAVELFEDMISKRGISPDPVIFNVMINGFCRSGEVER 287
Query: 53 ------FRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFT------ARLIA 100
F G A F +I E ++ + ++ K G L+
Sbjct: 288 AKMILDFMKKNGCNPNVYNYSALMNGFCKEGKIQEAKQVFDEVKKTGLKLDTVGYTTLMN 347
Query: 101 LYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIE 160
+ + A K+ EM C L++N +L + + +E + + G+
Sbjct: 348 CLCRNGEIDEAMKLLGEMKASRCRADALTYNVILRGLSSEGRSEEALQMLDQWGCE-GVH 406
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
+ SY I+ A G L+ A L M K+GI T+N L++ +G ++
Sbjct: 407 LNKGSYRIILNALCCNGELEKAVKFLSVMSKRGIWPHHATWNELVVRLCESGNTEIGVRV 466
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS 261
+ + + P +S+ A ++ + E++ EL+ + S
Sbjct: 467 LIGFLGIGLIPAPKSWGAVVESICKERKLVHVFELLDSLAS 507
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 147/295 (49%), Gaps = 9/295 (3%)
Query: 69 NAKRFRWIEEILEHQKQYKDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTV 127
NA E+LE K + + FT +I A + A D + C+ V
Sbjct: 2 NAGDLHAALELLEEMKS-AGFAPDAFTHTPIITAMANAGDLDGA---MDHLRSMGCDPNV 57
Query: 128 LSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLY 187
+++ AL+ A +KK +E L +++ + G P+LV+YN ++ A + +A ++
Sbjct: 58 VTYTALIAAFARAKKLEEAMKLLEEMRER-GCPPNLVTYNVLVDALCKLSMVGAAQDVVK 116
Query: 188 EMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEK 247
+M + G +++TFN+L+ GF G DA K+ MV +RPNV +Y+A +DGL +
Sbjct: 117 KMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQ 176
Query: 248 QTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFK 304
+ +A E++ EM++ + PD FT+ ALI G +EEA++ + SGC + ++
Sbjct: 177 KFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYS 236
Query: 305 LLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
++ C+ G L A + +R D V+D L K ++ EA+ +++
Sbjct: 237 SIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILD 291
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 131/260 (50%), Gaps = 5/260 (1%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K+ F A++V +EM +++AL+ + K +E + + + + G PD+
Sbjct: 174 KSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGS-GCTPDV 232
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
V Y++II AF G L A L EM K+ D++T+NT++ G G+ A+A+ I +
Sbjct: 233 VVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQ 292
Query: 224 MV-NMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEG 282
M + +V P+V +Y+ ++GL +A +L+ M NPDV T+ +I G G
Sbjct: 293 MQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCG 352
Query: 283 NLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQ 339
LEEA+ + ++GC N + L+ +C+ +D A + + + C +
Sbjct: 353 RLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYN 412
Query: 340 LVVDRLAKELRVEEAKELVE 359
+V+ L R++EA++LV+
Sbjct: 413 TMVNGLCVSGRIKEAQQLVQ 432
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 136/278 (48%), Gaps = 6/278 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+ + K ++ARK+ M + V++++AL+ S+KF E + +++
Sbjct: 133 LVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKAS- 191
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ PD +Y+ +I ++ A +L M G D++ +++++ F +G+ +A
Sbjct: 192 GVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEA 251
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMR-SKEINPDVFTFYALIK 276
+K + M P+V +YN +DGL + +A ++ +M+ S ++ PDV T+ +I
Sbjct: 252 QKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVIN 311
Query: 277 GFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV 333
G L EA++ + K+GC + + ++ +C+ G L+ A L + C
Sbjct: 312 GLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAP 371
Query: 334 DQAPLQLVVDRLAKELRVEEAKELVELGKTNSYCRYNL 371
+ ++ L K +V+EA+ ++E + N+ C NL
Sbjct: 372 NVVTYTTLISGLCKARKVDEAERVMEEMR-NAGCPPNL 408
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 129/296 (43%), Gaps = 42/296 (14%)
Query: 53 FRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFT-ARLIALYGKAAMFENA 111
R N Y+ + L +++F +E+LE K ++ + FT + LI KA E A
Sbjct: 158 MRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKA-SGVTPDAFTYSALIHGLCKADKIEEA 216
Query: 112 RKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE-----------------------VDG 148
++ M G C V+ +++++ A S K E +DG
Sbjct: 217 EQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDG 276
Query: 149 LFK-----------DLPHKLG-IEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRL 196
L K D + G + PD+V+Y+T+I L A LL M K G
Sbjct: 277 LCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNP 336
Query: 197 DLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELV 256
D++T+ T++ G GR +AE + + M PNV +Y + GL ++ +A ++
Sbjct: 337 DVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVM 396
Query: 257 GEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN-----KSGCGMNKAIFKLLV 307
EMR+ P++ T+ ++ G G ++EA++ ++ C + A ++ +V
Sbjct: 397 EEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIV 452
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 73/169 (43%), Gaps = 10/169 (5%)
Query: 26 SVIRGIYKENNL---KRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEH 82
+VI G+ K + L ++L+D+ K+ + YT + L R E +L+
Sbjct: 308 TVINGLCKSDMLVEAQKLLDRMCKAG----CNPDVVTYTTIIDGLCKCGRLEEAEYLLQG 363
Query: 83 QKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSK 141
K+ LI+ KA + A +V +EM C ++++N ++ G CV S
Sbjct: 364 MKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCV-SG 422
Query: 142 KFDEVDGLFKDLPH-KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEM 189
+ E L + + + PD +Y TI+ A + + A LL +M
Sbjct: 423 RIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 471
>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
Length = 729
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 143/308 (46%), Gaps = 5/308 (1%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMP 119
YT ++ L ++R++ +EE+ K E ++ + + + A KV D M
Sbjct: 270 YTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMS 329
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL 179
C +++++++L + + D+ L L G +PD ++Y T++K
Sbjct: 330 EHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRL-KSYGCKPDTIAYTTVLKGLCSIEQW 388
Query: 180 DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNAR 239
+ A L+ EM D +TFNT++ G A K+ E M P++ +YN+
Sbjct: 389 EHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSI 448
Query: 240 LDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW---YNKSGC 296
+DGL E+ A+EL+ ++S PD+ TF L+KG + E+A++ S C
Sbjct: 449 IDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDC 508
Query: 297 GMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKE 356
+ F ++ +C+KG L A K C+ +Q+ +VVD L K + +EA +
Sbjct: 509 PPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALK 568
Query: 357 LVELGKTN 364
L+ G TN
Sbjct: 569 LLS-GMTN 575
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 119/258 (46%), Gaps = 4/258 (1%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
KA+ + A + DEM + CE ++++N L+ A N DE + DLP G +PD
Sbjct: 209 KASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSH-GCKPDA 267
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
V+Y ++K+ L EM D +TFNT++ G A K+ +
Sbjct: 268 VTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDH 327
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M P++ +Y++ LDGL + A+EL+ ++S PD + ++KG +
Sbjct: 328 MSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQ 387
Query: 284 LEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL 340
E A+ + S C ++ F ++ +C+KG +D A + ++ C D
Sbjct: 388 WEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNS 447
Query: 341 VVDRLAKELRVEEAKELV 358
++D L E +++A EL+
Sbjct: 448 IIDGLCNERCIDDAMELL 465
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/371 (21%), Positives = 152/371 (40%), Gaps = 42/371 (11%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
S++ G+ + V+ + G + +T YT ++ L + +++ EE++
Sbjct: 342 SILDGLCDVGRVDDAVELLSRLKSYG-CKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVC 400
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
E +IA + + + A KV ++M C ++++N+++ N + D+
Sbjct: 401 SDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDD 460
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
L +L G +PD+V++NT++K + A L+ M D TFNT++
Sbjct: 461 AMELLSNL-QSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVI 519
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEIN 265
G A + + M PN +YN +D L +T++AL+L+ M +
Sbjct: 520 TSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNG--T 577
Query: 266 PDVFTFYALIKGFVNEGNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFN- 321
PD+ T+ +I G +EEA R +G + ++ L +C + D A
Sbjct: 578 PDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRM 637
Query: 322 LCK----------------------------------RTFSERCLVDQAPLQLVVDRLAK 347
LC+ S C+ D++ ++++ LA
Sbjct: 638 LCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAY 697
Query: 348 ELRVEEAKELV 358
E ++EAK+L+
Sbjct: 698 ECLLDEAKQLL 708
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 105/248 (42%), Gaps = 43/248 (17%)
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
LG +V+YNT++ + G ++ A L+ M D TFN L+ GR D
Sbjct: 124 LGASATVVTYNTMVNGYCRAGRIEDARRLISGMP---FPPDTFTFNPLIRALCVRGRVPD 180
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
A +++ M++ P+V +Y+ LD ++A+ L+ EMR+K PD+ T+ LI
Sbjct: 181 ALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLIN 240
Query: 277 GFVNEGNLEEA-----------------------------KRW---------YNKSGCGM 298
NEG+++EA +RW + C
Sbjct: 241 AMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAP 300
Query: 299 NKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
++ F +V +C++G +D A + C+ D ++D L RV++A EL
Sbjct: 301 DEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVEL- 359
Query: 359 ELGKTNSY 366
L + SY
Sbjct: 360 -LSRLKSY 366
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 89/225 (39%), Gaps = 37/225 (16%)
Query: 170 IKAFVDKGSLDSANTLLYEMEKKG-----IRLDLITFNTLLLGFYSNGRFADAEKI---- 220
+++ + + +D A L+ + G + L ++ N L+ S GR ADAE++
Sbjct: 65 LRSLIQREEIDDALALVDSIASGGGSGKCLPLPVVPCNILIKRLCSGGRVADAERVFATL 124
Query: 221 --------WETMVN-----------------MNVRPNVRSYNARLDGLAIEKQTKKALEL 255
+ TMVN M P+ ++N + L + + AL +
Sbjct: 125 GASATVVTYNTMVNGYCRAGRIEDARRLISGMPFPPDTFTFNPLIRALCVRGRVPDALAV 184
Query: 256 VGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCE 312
+M + +P V T+ L+ +A ++ GC + + +L+ +C
Sbjct: 185 FDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCN 244
Query: 313 KGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
+GD+D A N+ S C D V+ L R +E +EL
Sbjct: 245 EGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEEL 289
>gi|449436014|ref|XP_004135789.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
mitochondrial-like [Cucumis sativus]
Length = 460
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 140/308 (45%), Gaps = 39/308 (12%)
Query: 53 FRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENAR 112
F+ + Y+ + +LA ++RF +E IL H + E LI YGKA + E
Sbjct: 77 FKHHYPSYSSLIYKLARSRRFEAVETILGHLRNRNIRCNETLFVALIQHYGKAHLVEKGI 136
Query: 113 KVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKA 172
++F +MP NC +T+ SFN LL V+ +F + +F+ +++ P+ VSYN +IK
Sbjct: 137 ELFHQMPSFNCFRTLQSFNVLLNTLVDCDQFSKASEIFQQ-AYEMDFRPNSVSYNIMIKG 195
Query: 173 FVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPN 232
++ KG + A L EM +KG++ ++T+N+ L G A +++ M PN
Sbjct: 196 WIKKGGWEQACNLFDEMLEKGVQPSVVTYNSFLGVLCRKGEMDTALCLFKNMTEKGHHPN 255
Query: 233 VRSYNARLDG---LAIEKQTKKAL--------------------------------ELVG 257
+Y ++G + K+ KK + L+
Sbjct: 256 AVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKLRPVNYGVLMTHLGKTGNIDEMESLLN 315
Query: 258 EMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKG 314
EM+ + + PDV T+ L+ EG + +A + K GC N A +++++ C G
Sbjct: 316 EMKKRRLKPDVVTYNILVNYLCKEGKVGDAYKVLVKMQVGGCDPNAATYRMMIDGYCNAG 375
Query: 315 DLDFAFNL 322
D D A +
Sbjct: 376 DFDGAMKI 383
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 125/295 (42%), Gaps = 41/295 (13%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I+ K + +++ ++ F + FRT + + L + +F EI Q+
Sbjct: 121 ALIQHYGKAHLVEKGIELFHQMPSFNCFRTLQS-FNVLLNTLVDCDQFSKASEIF--QQA 177
Query: 86 YKDISKEGFTARLIALYG--KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKF 143
Y+ + + I + G K +E A +FDEM + + +V+++N+ LG +
Sbjct: 178 YEMDFRPNSVSYNIMIKGWIKKGGWEQACNLFDEMLEKGVQPSVVTYNSFLGVLCRKGEM 237
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKA--FVDK------------------------- 176
D LFK++ K G P+ V+Y +++ F+ K
Sbjct: 238 DTALCLFKNMTEK-GHHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKLRPVNYGV 296
Query: 177 --------GSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
G++D +LL EM+K+ ++ D++T+N L+ G+ DA K+ M
Sbjct: 297 LMTHLGKTGNIDEMESLLNEMKKRRLKPDVVTYNILVNYLCKEGKVGDAYKVLVKMQVGG 356
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
PN +Y +DG A++++ M P + TF +L+ G + N
Sbjct: 357 CDPNAATYRMMIDGYCNAGDFDGAMKILNAMLMSGHYPHLKTFASLVVGLLKGEN 411
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 82/183 (44%), Gaps = 4/183 (2%)
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
E LF++ H+ G + SY+++I ++ T+L + + IR + F L
Sbjct: 64 EALALFENY-HEKGFKHHYPSYSSLIYKLARSRRFEAVETILGHLRNRNIRCNETLFVAL 122
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+ + +++ M + N ++S+N L+ L Q KA E+ + +
Sbjct: 123 IQHYGKAHLVEKGIELFHQMPSFNCFRTLQSFNVLLNTLVDCDQFSKASEIFQQAYEMDF 182
Query: 265 NPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFN 321
P+ ++ +IKG++ +G E+A ++ + G + + + +C KG++D A
Sbjct: 183 RPNSVSYNIMIKGWIKKGGWEQACNLFDEMLEKGVQPSVVTYNSFLGVLCRKGEMDTALC 242
Query: 322 LCK 324
L K
Sbjct: 243 LFK 245
>gi|326528779|dbj|BAJ97411.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326534194|dbj|BAJ89447.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 390
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 134/264 (50%), Gaps = 9/264 (3%)
Query: 99 IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLG 158
I L+G+A + +A F P + S NALL AC+ + E +F+ P
Sbjct: 111 IVLFGQAGLLPDAISTFQSSP------STRSLNALLFACIVAGNHAEAARIFQTFPDAHR 164
Query: 159 IEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAE 218
++P+ ++N+IIK+F + G+ S ++ EM K+G++ TF + GFY RF D E
Sbjct: 165 VKPNAETFNSIIKSFSESGTTRSFYSVFDEMCKQGVKPTATTFTAAIAGFYKEERFDDVE 224
Query: 219 KIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGF 278
K+ + M +++ YNAR+ GL + A L+ EM K P T+ LI GF
Sbjct: 225 KVIKLMKKHGCGESLQVYNARVQGLCKLGRNGDAKALLSEMAKKGTKPSWVTYNHLIYGF 284
Query: 279 VNEGNLEEAKRWYNKSGCG--MNKAIFKLLVPF-VCEKGDLDFAFNLCKRTFSERCLVDQ 335
EG+LEE KR Y + G + + F V F +C+ GD D A ++ +
Sbjct: 285 CKEGDLEEVKRLYKEMGMKGLVGDSNFYFTVIFHLCKAGDFDTALSVYNEIAPRNWIPCF 344
Query: 336 APLQLVVDRLAKELRVEEAKELVE 359
+ ++++V+ LA R++EAK ++E
Sbjct: 345 STMKMLVNGLAGSSRIDEAKGIIE 368
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 1/155 (0%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
F++ KV M C +++ +NA + + + L ++ K G +P V+YN
Sbjct: 220 FDDVEKVIKLMKKHGCGESLQVYNARVQGLCKLGRNGDAKALLSEMAKK-GTKPSWVTYN 278
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
+I F +G L+ L EM KG+ D + T++ G F A ++ +
Sbjct: 279 HLIYGFCKEGDLEEVKRLYKEMGMKGLVGDSNFYFTVIFHLCKAGDFDTALSVYNEIAPR 338
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
N P + ++GLA + +A ++ +M+ K
Sbjct: 339 NWIPCFSTMKMLVNGLAGSSRIDEAKGIIEKMKEK 373
>gi|359494844|ref|XP_003634853.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g61870, mitochondrial-like [Vitis vinifera]
Length = 336
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 127/239 (53%), Gaps = 10/239 (4%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMP 119
++ + +LA++K F I L+ K D+ E F + I L+G+A M +A + F++M
Sbjct: 72 FSVAISKLADSKHFDSIRHFLDELKARPDLRTERFVSHAIVLFGQAGMLNDAVRTFEQMH 131
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL 179
++TV S NALL +C+ +K + E + +F + P GIE +L SYNT++KAF + GS
Sbjct: 132 QLGVDRTVRSLNALLFSCILAKNYKEANRIFLEFPKTYGIELNLDSYNTVLKAFSESGSS 191
Query: 180 DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNAR 239
S ++L EM +KG++ + +F LL GFY+ ++ D + + M ++P + +YN R
Sbjct: 192 SSGYSILAEMGRKGVKPNATSFGILLAGFYNEEKYEDVGXVLKMMEEYXMQPGISTYNIR 251
Query: 240 LDGLAIEKQTKKALELVGEMR----------SKEINPDVFTFYALIKGFVNEGNLEEAK 288
L K + + L G + K P++ T +L+ G + +EEA+
Sbjct: 252 XQSLCKLKXSSERALLDGILARRMXXXXXXYEKGWXPNISTMTSLVNGLXSISKVEEAR 310
>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
Length = 684
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 143/336 (42%), Gaps = 8/336 (2%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
+I G+ +E + + + S G F+ +T YT ++ L AKR+ +EE+ +
Sbjct: 221 IINGMCREGRVDDAREFLNRLSSYG-FQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEK 279
Query: 87 KDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEV 146
+ E L+ + + M E A +V ++M G C N ++ + D+
Sbjct: 280 NCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDA 339
Query: 147 DGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLL 206
++ G PD +SY T++K + A LL EM +K + +TFNT +
Sbjct: 340 FQFLNNM-GSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFIC 398
Query: 207 GFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINP 266
G A + E M N+ +YNA ++G ++ + ALEL M K P
Sbjct: 399 ILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---P 455
Query: 267 DVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLC 323
+ T+ L+ G N L+ A + C N F +LV F C+KG +D A L
Sbjct: 456 NTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELV 515
Query: 324 KRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
++ C + ++D + + EEA EL+
Sbjct: 516 EQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLH 551
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 172/353 (48%), Gaps = 14/353 (3%)
Query: 12 FSTTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRF--RTNTGIYTGTVQRLAN 69
S A VI I K+ R+ D F+ +++G + +T YT ++ L
Sbjct: 311 MSGHGCAANTTLCNIVINTICKQG---RVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCR 367
Query: 70 AKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLS 129
A+R+ +E+L+ + E I + + + E A + ++M CE +++
Sbjct: 368 AERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVT 427
Query: 130 FNALL-GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
+NAL+ G CV + D LF +P K P+ ++Y T++ + LD+A LL E
Sbjct: 428 YNALVNGFCVQGR-VDSALELFYSMPCK----PNTITYTTLLTGLCNAERLDAAAELLAE 482
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
M +K +++TFN L+ F G +A ++ E M+ PN+ +YN LDG+ +
Sbjct: 483 MLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCN 542
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA-KRWYNKSGCGMNK--AIFKL 305
+++ALEL+ + S ++PD+ T+ ++I E +EEA K ++ GM I+
Sbjct: 543 SEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNK 602
Query: 306 LVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
++ +C++ + D A + S C+ ++ +++ LA E ++E ++L+
Sbjct: 603 ILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLL 655
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 120/265 (45%), Gaps = 7/265 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+A Y + + AR++ MP ++ ++ + + E L D+ H+
Sbjct: 119 LVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHR- 174
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G +P +V+Y +++A A +L EM KG +++T+N ++ G GR DA
Sbjct: 175 GCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 234
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ + + +P+ SY L GL K+ + EL EM K P+ TF L++
Sbjct: 235 REFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRF 294
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
F G +E A + + GC N + +++ +C++G +D AF S C D
Sbjct: 295 FCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPD 354
Query: 335 QAPLQLVVDRLAKELRVEEAKELVE 359
V+ L + R E+AKEL++
Sbjct: 355 TISYTTVLKGLCRAERWEDAKELLK 379
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 103/235 (43%), Gaps = 41/235 (17%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G D+ +YNT++ + G LD+A L+ M + D T+ ++ G GR +A
Sbjct: 108 GTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEA 164
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ + M++ +P+V +Y L+ + +A+E++ EMR+K P++ T+ +I G
Sbjct: 165 LSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIING 224
Query: 278 FVNEGNLEE-----------------------------AKRWYN---------KSGCGMN 299
EG +++ AKRW + + C N
Sbjct: 225 MCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPN 284
Query: 300 KAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA 354
+ F +LV F C G ++ A + ++ C + +V++ + K+ RV++A
Sbjct: 285 EVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDA 339
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 99/212 (46%), Gaps = 3/212 (1%)
Query: 54 RTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTAR-LIALYGKAAMFENAR 112
+ NT YT + L NA+R E+L Q KD + T L++ + + + + A
Sbjct: 454 KPNTITYTTLLTGLCNAERLDAAAELLAEMLQ-KDCAPNVVTFNVLVSFFCQKGLMDEAI 512
Query: 113 KVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKA 172
++ ++M C ++++N LL N +E L L G+ PD+V+Y++II
Sbjct: 513 ELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSN-GVSPDIVTYSSIIGV 571
Query: 173 FVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPN 232
+ ++ A + + ++ G+R + +N +LL A + MV+ PN
Sbjct: 572 LSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPN 631
Query: 233 VRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+Y ++GLA E K+ +L+ E+ S+ +
Sbjct: 632 ELTYITLIEGLANEDFLKETRDLLRELCSRGV 663
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 85/203 (41%), Gaps = 8/203 (3%)
Query: 167 NTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVN 226
N ++ + + L A L+ +G D+ L+ GR +DA ++
Sbjct: 47 NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAER 106
Query: 227 MNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEE 286
+V +YN + G Q A L+ M + PD +T+ +I+G + G + E
Sbjct: 107 SGTAVDVFAYNTLVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGE 163
Query: 287 AKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVD 343
A + GC + + +L+ VC+ A + ++ C + ++++
Sbjct: 164 ALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIIN 223
Query: 344 RLAKELRVEEAKELVELGKTNSY 366
+ +E RV++A+E L + +SY
Sbjct: 224 GMCREGRVDDAREF--LNRLSSY 244
>gi|449436958|ref|XP_004136259.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Cucumis sativus]
gi|449497032|ref|XP_004160294.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Cucumis sativus]
Length = 504
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 166/341 (48%), Gaps = 8/341 (2%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
+ I+ I E + + +D F S+ F N Y +Q LA K+F+ I+ +L HQ
Sbjct: 52 TAIKLIKNERDPQHALDIFNMVSEQQGFNHNHATYASIIQNLAKYKKFQAIDGVL-HQMT 110
Query: 86 YKDIS-KEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVL-SFNALLGACVNSKKF 143
Y EG L+ + K++M E +F + E+ L + + L V S +
Sbjct: 111 YDTCKVHEGIFLNLMKHFSKSSMHERVLDMFYAIKSIVREKPSLKAISTCLNLLVESDRV 170
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRL-DLITFN 202
D L + KL + P+ +N ++K G L +A ++ EM+ + +L+T++
Sbjct: 171 DLARKLLVNARSKLNLRPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSARVSYPNLVTYS 230
Query: 203 TLLLGFYSNGRFADAEKIWETMVNM-NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS 261
TL+ G NG+ +A + +E MV+ N+ P+ +YN ++G + +A ++ M+S
Sbjct: 231 TLIGGLCENGKLKEAIEFFEEMVSKDNILPDALTYNILINGFCQRGKVDRARTILEFMKS 290
Query: 262 KEINPDVFTFYALIKGFVNEGNLEEAKRWYNK-SGCGM--NKAIFKLLVPFVCEKGDLDF 318
+P+VF + L+ G+ EG L+EAK +N+ GM + + L+ +C G +D
Sbjct: 291 NGCSPNVFNYSVLMNGYCKEGRLQEAKEVFNEIKSLGMKPDTISYTTLINCLCRTGRVDE 350
Query: 319 AFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
A L ++ + C D +++ L +E R +EA ++V+
Sbjct: 351 ATELLQQMKDKDCRADTVTFNVMLGGLCREGRFDEALDMVQ 391
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 115/223 (51%), Gaps = 4/223 (1%)
Query: 98 LIALYGKAAMFENARKVFDEM-PGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHK 156
L+ + + + A +V EM R +++++ L+G + K E F+++ K
Sbjct: 196 LVKHHCRNGDLQAAFEVVKEMKSARVSYPNLVTYSTLIGGLCENGKLKEAIEFFEEMVSK 255
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
I PD ++YN +I F +G +D A T+L M+ G ++ ++ L+ G+ GR +
Sbjct: 256 DNILPDALTYNILINGFCQRGKVDRARTILEFMKSNGCSPNVFNYSVLMNGYCKEGRLQE 315
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
A++++ + ++ ++P+ SY ++ L + +A EL+ +M+ K+ D TF ++
Sbjct: 316 AKEVFNEIKSLGMKPDTISYTTLINCLCRTGRVDEATELLQQMKDKDCRADTVTFNVMLG 375
Query: 277 GFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDL 316
G EG +EA K G +NK +++++ F+ +KG+L
Sbjct: 376 GLCREGRFDEALDMVQKLPFEGFYLNKGSYRIVLNFLTQKGEL 418
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 75/166 (45%), Gaps = 1/166 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + + A ++ +M ++C ++FN +LG +FDE + + LP +
Sbjct: 338 LINCLCRTGRVDEATELLQQMKDKDCRADTVTFNVMLGGLCREGRFDEALDMVQKLPFE- 396
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G + SY ++ KG L A LL M +G T NTLLL +NG DA
Sbjct: 397 GFYLNKGSYRIVLNFLTQKGELRKATELLGLMLNRGFVPHHATSNTLLLLLCNNGMVKDA 456
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
+ ++ M +P S+ +D + E++ EL+ + ++E
Sbjct: 457 VESLLGLLEMGFKPEHESWFTLVDLICRERKMLPVFELLDVLVTQE 502
>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Vitis vinifera]
gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 132/267 (49%), Gaps = 5/267 (1%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
+E A+ +F+EM V++FN L+ A + K +E + L K + + G PD +YN
Sbjct: 289 WEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQR-GESPDTFTYN 347
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
T+I F +G +D A L ME KGI D +++N L+ G+ +GR +A+K++ M+
Sbjct: 348 TLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCK 407
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+ P V +YN L GL E + + A L GEM+ ++ P+ T+ L+ G +L EA
Sbjct: 408 EIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEA 467
Query: 288 KRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDR 344
++ + IF L+ +C+ ++ A L R E + +++
Sbjct: 468 MELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHG 527
Query: 345 LAKELRVEEAKELVELGKTNSYCRYNL 371
L K ++E AK+L LG C NL
Sbjct: 528 LCKSGQLENAKDLF-LGMEEKGCAPNL 553
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 151/337 (44%), Gaps = 7/337 (2%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
S+I G+ + F + D G N + + L A + +L+ Q
Sbjct: 278 SIIHGMCHTGRWEGAKGLFNEMVDEG-VHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQ 336
Query: 86 YKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
+ S + FT LI + ++AR +F M + E +S+N L+ S +
Sbjct: 337 RGE-SPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMV 395
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
E L++++ K I P +++YNT++ +G + A L EM+ + + T+N L
Sbjct: 396 EAKKLYREMMCK-EIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNIL 454
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
L G N ++A +++ + N + +P+++ +N +DGL ++ + A EL + + +
Sbjct: 455 LDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGL 514
Query: 265 NPDVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFN 321
P+V T+ +I G G LE AK + + GC N F L+ C+ ++
Sbjct: 515 EPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVE 574
Query: 322 LCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
L + + D + + +VVD L+K+ + E L+
Sbjct: 575 LLQEMAEKDFSPDASTISIVVDLLSKDEKYREYLHLL 611
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 126/291 (43%), Gaps = 45/291 (15%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A VF+ + + SFN LLGA K++ +V L+K + +G+ PD ++ N +I
Sbjct: 76 AFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMS-LIGLAPDFITLNILI 134
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
+ + +D +L EM ++G + +TF +L+ G R ++A + MV M R
Sbjct: 135 NCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYR 194
Query: 231 PNVRSYNARLDGLAIEKQTKKAL------------------------------------- 253
PNV +Y L+GL + T A+
Sbjct: 195 PNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLI 254
Query: 254 ----ELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLL 306
EL EM+ + I+PDV + ++I G + G E AK +N+ G N F +L
Sbjct: 255 DKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVL 314
Query: 307 VPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
+ +C+ G ++ A +L K D ++D E R+++A++L
Sbjct: 315 IDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDL 365
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 100/207 (48%), Gaps = 11/207 (5%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
GI PD+V+Y++II G + A L EM +G+ +++TFN L+ G+ +A
Sbjct: 268 GISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEA 327
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ + M+ P+ +YN +DG +E + A +L M SK I D ++ LI G
Sbjct: 328 NHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLING 387
Query: 278 FVNEGNLEEAKRWYNKSGCG--MNKAI-FKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
+ G + EAK+ Y + C M I + L+ + +G + A+NL F E + D
Sbjct: 388 YCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNL----FGEMKVHD 443
Query: 335 QAP----LQLVVDRLAKELRVEEAKEL 357
P +++D L K + EA EL
Sbjct: 444 LTPESCTYNILLDGLCKNNHLSEAMEL 470
>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 707
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 132/258 (51%), Gaps = 6/258 (2%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
E A ++ +EM G C +++++ L+ A + K DE GL K++ HK G+E DL+ Y
Sbjct: 193 LEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHK-GLEADLIVYT 251
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
++I+ F D G LD L E+ ++G IT+NTL+ GF GR +A +I+E M+
Sbjct: 252 SLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMER 311
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
VRPNV +Y +DGL +TK+AL+L+ M K+ P+V T+ +I + + +A
Sbjct: 312 GVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADA 371
Query: 288 ---KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL--VV 342
K + + L+ +C KGDLD A L + D + ++
Sbjct: 372 LEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALI 431
Query: 343 DRLAKELRVEEAKELVEL 360
L K R+ +A ++ +L
Sbjct: 432 HGLCKGNRLHQALDIYDL 449
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 117/271 (43%), Gaps = 10/271 (3%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++IRG K LK + F+ + G R N YTG + L + + ++L Q
Sbjct: 287 TLIRGFCKLGRLKEASEIFEFMMERG-VRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQ 345
Query: 86 YKDISKEGFTARLIA-LYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
KD T +I K ++ +A ++ + M R +++N+LLG D
Sbjct: 346 -KDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLD 404
Query: 145 EVDGL----FKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLIT 200
E L KD + +PD++S+N +I L A + + +K D++T
Sbjct: 405 EASKLLYLMLKDSSYT---DPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVT 461
Query: 201 FNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMR 260
N LL +G A ++W+ + N + PN +Y +DG A L+ +MR
Sbjct: 462 TNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMR 521
Query: 261 SKEINPDVFTFYALIKGFVNEGNLEEAKRWY 291
E+ P VF + L+ +G L++A R +
Sbjct: 522 LSELPPSVFDYNCLLSSLCKKGTLDQAWRLF 552
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 123/285 (43%), Gaps = 15/285 (5%)
Query: 85 QYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
Y D F A LI K A ++D + + +++ N LL + + S +
Sbjct: 418 SYTDPDVISFNA-LIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVN 476
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
+ L+K + + I P+ +Y T+I F G L+ A LL +M + + +N L
Sbjct: 477 KAMELWKQISNS-KIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCL 535
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
L G A +++E M + P+V S+N +DG K A L+ M +
Sbjct: 536 LSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGL 595
Query: 265 NPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFN 321
+PD+FT+ LI F+ G L+EA +++K SG + I ++ + +G+ D
Sbjct: 596 SPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVLKYCISQGETDKLTE 655
Query: 322 LCKRTFSERCLVDQAPLQLVVDRLAKE----------LRVEEAKE 356
K+ + ++D+ V+D + LRV + KE
Sbjct: 656 FVKKLVDKDVVLDKELTCTVMDYMCSSSGNMDIAKRLLRVADDKE 700
>gi|242095042|ref|XP_002438011.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
gi|241916234|gb|EER89378.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
Length = 1443
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 136/270 (50%), Gaps = 8/270 (2%)
Query: 95 TARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLP 154
A ++ + G+A A +VF G TV FNA++G S +FD+ L D
Sbjct: 191 VAVVLGVLGRARQDSIAEEVFLRFAGEGA--TVQVFNAMMGVYARSGRFDDARQLL-DTM 247
Query: 155 HKLGIEPDLVSYNTIIKAFVDKGSLDS--ANTLLYEMEKKGIRLDLITFNTLLLGFYSNG 212
H GI+PDLVS+NT+I A G L + A LL+E+ + G+R D+IT+NTL+ +
Sbjct: 248 HDRGIDPDLVSFNTLINARSKSGCLAAGVALDLLFEVRQSGLRPDVITYNTLISACSQSS 307
Query: 213 RFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFY 272
DA ++E M+ RP++ +YNA + + ++A L GE+ K PD T+
Sbjct: 308 NLEDAVTVFEEMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFGELVEKGFMPDAVTYN 367
Query: 273 ALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSE 329
+L+ F EGN+++ + K+G N+ + ++ + G LD A L +
Sbjct: 368 SLLYAFAKEGNVDKVEHTCEELVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAV 427
Query: 330 RCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
C D +++D L K ++ EA +++E
Sbjct: 428 GCTPDAVTYTVMIDSLGKMDKIAEAGKVLE 457
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 132/265 (49%), Gaps = 4/265 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI+ +++ E+A VF+EM C + ++NA++ K +E + LF +L K
Sbjct: 299 LISACSQSSNLEDAVTVFEEMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFGELVEK- 357
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G PD V+YN+++ AF +G++D E+ K G + + IT+NT++ + GR A
Sbjct: 358 GFMPDAVTYNSLLYAFAKEGNVDKVEHTCEELVKAGFKKNEITYNTMIHMYGKMGRLDLA 417
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+++ M + P+ +Y +D L + +A +++ +M + P + F ALI
Sbjct: 418 VGLYDEMRAVGCTPDAVTYTVMIDSLGKMDKIAEAGKVLEDMADAGLKPTLVAFSALICA 477
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
+ G +A++ ++ SG ++ + +++ G+ + L + ++ D
Sbjct: 478 YAKGGRRADAEKTFDCMIASGVKPDRLAYLVMLDVFARSGETEKMLRLYRTMMNDNYRPD 537
Query: 335 QAPLQLVVDRLAKELRVEEAKELVE 359
Q+++ LAKE + EE +E+++
Sbjct: 538 DDMYQVLLVALAKEDKCEEIEEIIQ 562
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 95/212 (44%), Gaps = 7/212 (3%)
Query: 81 EHQKQYKDISKEGFTA------RLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL 134
E ++ + ++ ++GF L+ + K + +E+ ++ +++N ++
Sbjct: 346 EAERLFGELVEKGFMPDAVTYNSLLYAFAKEGNVDKVEHTCEELVKAGFKKNEITYNTMI 405
Query: 135 GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGI 194
+ D GL+ ++ +G PD V+Y +I + + A +L +M G+
Sbjct: 406 HMYGKMGRLDLAVGLYDEM-RAVGCTPDAVTYTVMIDSLGKMDKIAEAGKVLEDMADAGL 464
Query: 195 RLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALE 254
+ L+ F+ L+ + GR ADAEK ++ M+ V+P+ +Y LD A +T+K L
Sbjct: 465 KPTLVAFSALICAYAKGGRRADAEKTFDCMIASGVKPDRLAYLVMLDVFARSGETEKMLR 524
Query: 255 LVGEMRSKEINPDVFTFYALIKGFVNEGNLEE 286
L M + PD + L+ E EE
Sbjct: 525 LYRTMMNDNYRPDDDMYQVLLVALAKEDKCEE 556
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 77/162 (47%), Gaps = 1/162 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I +YGK + A ++DEM C +++ ++ + K E + +D+
Sbjct: 404 MIHMYGKMGRLDLAVGLYDEMRAVGCTPDAVTYTVMIDSLGKMDKIAEAGKVLEDMADA- 462
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++P LV+++ +I A+ G A M G++ D + + +L F +G
Sbjct: 463 GLKPTLVAFSALICAYAKGGRRADAEKTFDCMIASGVKPDRLAYLVMLDVFARSGETEKM 522
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
+++ TM+N N RP+ Y L LA E + ++ E++ +M
Sbjct: 523 LRLYRTMMNDNYRPDDDMYQVLLVALAKEDKCEEIEEIIQDM 564
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 106/255 (41%), Gaps = 28/255 (10%)
Query: 40 LVDKFKKSSDLGRFRTNTGIYTG--TVQRLANAKRFRWIEEILEHQKQYKDISKEGFTAR 97
++D F K+ D+ IY G L N +R + +L H +++D+
Sbjct: 856 MLDAFAKAGDVFEV---MKIYNGMKAAGYLPNMHLYRSMTSLLCHHNRFRDVE------L 906
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+IA EM G + + FN+LL + FD +++ + +
Sbjct: 907 MIA----------------EMEGAGFKPDLSIFNSLLNMYTAAGNFDRTTQVYQSI-LEA 949
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+EPD +YNT+I + + TLL EM K+G+ L ++ +LL A
Sbjct: 950 GLEPDEDTYNTLIVMYCRSLRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQA 1009
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++++E M + + + N Y+ + KA L+ M+ I P + T + L+
Sbjct: 1010 DQLFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTS 1069
Query: 278 FVNEGNLEEAKRWYN 292
+ G EA+ N
Sbjct: 1070 YGTAGQPHEAENVLN 1084
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 103/244 (42%), Gaps = 12/244 (4%)
Query: 130 FNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEM 189
+NAL+ A S +++ +F ++ K G P + S N +++A + G LD ++ E+
Sbjct: 783 WNALIHAYAESGLYEKARAVFDNMI-KTGPLPTVDSVNGMMRALIVDGRLDELYVVVGEL 841
Query: 190 EKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQT 249
+ ++ T +L F G + KI+ M PN+ Y + L +
Sbjct: 842 QDMDFKISKSTVLLMLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMTSLLCHHNRF 901
Query: 250 KKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLL 306
+ ++ EM PD+ F +L+ + GN + + Y ++G ++ + L
Sbjct: 902 RDVELMIAEMEGAGFKPDLSIFNSLLNMYTAAGNFDRTTQVYQSILEAGLEPDEDTYNTL 961
Query: 307 VPFVCEKGDLDFAFNLC----KRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGK 362
+ C + F L KR + + Q+ L+ ELR E+A +L E +
Sbjct: 962 IVMYCRSLRPEEGFTLLNEMGKRGLTPKL---QSYKSLLAASAKAELR-EQADQLFEEMR 1017
Query: 363 TNSY 366
+ SY
Sbjct: 1018 SKSY 1021
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/276 (18%), Positives = 111/276 (40%), Gaps = 44/276 (15%)
Query: 76 IEEILEHQKQYKDISKEGFTARLIALYGKAAMFEN-ARKVFDEMPGRNCEQTVLSFNALL 134
+E I +H +D+ E L + +E ++++ + PG+NC + L+
Sbjct: 627 LECIRDHVSSSQDLISECSIILLCRKQTSISAYEQYSQRLMLKYPGQNCNL----YEHLI 682
Query: 135 GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGI 194
V ++ F E +F D+ +GIE Y +II + G ++A+ L+ + + GI
Sbjct: 683 TCLVEAELFSEACQVFCDMQF-IGIEASKNIYESIISTYCKLGFPETAHGLMDDALQSGI 741
Query: 195 RLDLIT-----------------------------------FNTLLLGFYSNGRFADAEK 219
L++++ +N L+ + +G + A
Sbjct: 742 PLNILSCRVIIIEAYGNIKLWQQAEILVKGLRQASGIDRRIWNALIHAYAESGLYEKARA 801
Query: 220 IWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFV 279
+++ M+ P V S N + L ++ + + +VGE++ + T ++ F
Sbjct: 802 VFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVVGELQDMDFKISKSTVLLMLDAFA 861
Query: 280 NEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCE 312
G++ E + YN +G N +++ + +C
Sbjct: 862 KAGDVFEVMKIYNGMKAAGYLPNMHLYRSMTSLLCH 897
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 83/180 (46%), Gaps = 1/180 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI +Y ++ E + +EM R + S+ +LL A ++ ++ D LF+++ K
Sbjct: 961 LIVMYCRSLRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQLFEEMRSK- 1019
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
+ + Y+ ++K + + G+ A LL M++ GI + T + L+ + + G+ +A
Sbjct: 1020 SYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPHEA 1079
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
E + ++ + ++ + Y+ D ++ + EM+ + PD + I+
Sbjct: 1080 ENVLNSLKSSSLEVSTLPYSTVFDAYLKNGDYDLGIKKLLEMKRDGVEPDHQVWTCFIRA 1139
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 41/232 (17%), Positives = 97/232 (41%), Gaps = 9/232 (3%)
Query: 88 DISKEGFTARL------IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSK 141
++ K G T +L +A KA + E A ++F+EM ++ + ++ ++ N+
Sbjct: 980 EMGKRGLTPKLQSYKSLLAASAKAELREQADQLFEEMRSKSYQLNRSIYHMMMKIYRNAG 1039
Query: 142 KFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITF 201
+ + L + GIEP + + + ++ ++ G A +L ++ + + + +
Sbjct: 1040 NHSKAENLLAVMKED-GIEPTIATMHILMTSYGTAGQPHEAENVLNSLKSSSLEVSTLPY 1098
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS 261
+T+ + NG + K M V P+ + + + ++ +QT A+ L+ ++
Sbjct: 1099 STVFDAYLKNGDYDLGIKKLLEMKRDGVEPDHQVWTCFIRAASLCEQTADAILLLKSLQD 1158
Query: 262 KEINPDVFTFYALIKGFVNE--GNLEEAKRWYNKSGCGMNKAIFKLLVPFVC 311
+ + ++E LEE + + + A+ LL F C
Sbjct: 1159 CGFDLPIRLLTERTPSLLSEIANYLEELEALEDSAALNFVNAVEDLLWAFEC 1210
>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 907
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 142/304 (46%), Gaps = 5/304 (1%)
Query: 24 IGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQ 83
+ S++ G+ K ++ ++ K+ ++ G N +Y + L + F E + +
Sbjct: 335 VSSLVEGLRKRGKVEEALNLVKRVAEFG-VSPNIFVYNALIDSLCKGRNFDEAELLFDRM 393
Query: 84 KQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKF 143
+ + + LI ++ + + A EM + +V +N+L+
Sbjct: 394 GKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDI 453
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT 203
+ L ++ +K +EP +V+Y +++ + KG ++ A L +EM KGI + TF T
Sbjct: 454 SAAESLMAEMINK-KLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTT 512
Query: 204 LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
LL G + G DA K++ M NV+PN +YN ++G E KA E + EM K
Sbjct: 513 LLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKG 572
Query: 264 INPDVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAF 320
I PD +++ LI G G EAK + +K C +N+ + L+ C +G L+ A
Sbjct: 573 IVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEAL 632
Query: 321 NLCK 324
++C+
Sbjct: 633 SVCQ 636
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 131/298 (43%), Gaps = 22/298 (7%)
Query: 70 AKRFRWIEEILEHQKQYKDISKEGFTARLI----ALYGKAAMFENARKVFDEMPGRNCEQ 125
+K F ++ E++E K I + ++ R + L G+A+ A+ D + NCE
Sbjct: 559 SKAFEFLNEMIE-----KGIVPDTYSYRPLIHGLCLTGQAS---EAKVFVDGLHKGNCEL 610
Query: 126 TVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTL 185
+ + LL K +E + +D+ + G++ DLV Y +I + L
Sbjct: 611 NEICYTGLLHGFCREGKLEEALSVCQDMGLR-GVDLDLVCYGVLIDGSLKHKDRKVFLGL 669
Query: 186 LYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAI 245
L EM +G++ D + + +++ G F +A IW+ M+N PN +Y A ++GL
Sbjct: 670 LKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCK 729
Query: 246 EKQTKKALELVGEMRSKEINPDVFTFYA----LIKGFVNEGNLEEAKRWYNK--SGCGMN 299
+A L +MR P+ T+ L KG G++++A +N G N
Sbjct: 730 AGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGV---GDMKKAVELHNAILKGLLAN 786
Query: 300 KAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
A + +L+ C +G ++ A L R + D ++ L + V++A EL
Sbjct: 787 TATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIEL 844
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 121/264 (45%), Gaps = 6/264 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+ Y A +++ EM G+ ++ +F LL + + LF ++ +
Sbjct: 478 LMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMA-EW 536
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
++P+ V+YN +I+ + ++G++ A L EM +KGI D ++ L+ G G+ ++A
Sbjct: 537 NVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEA 596
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ + + N N Y L G E + ++AL + +M + ++ D+ + LI G
Sbjct: 597 KVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDG 656
Query: 278 FVNEGN----LEEAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV 333
+ + L K +++ G + I+ ++ + GD AF + +E C+
Sbjct: 657 SLKHKDRKVFLGLLKEMHDR-GLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVP 715
Query: 334 DQAPLQLVVDRLAKELRVEEAKEL 357
++ V++ L K V EA+ L
Sbjct: 716 NEVTYTAVINGLCKAGFVNEAEIL 739
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 114/251 (45%), Gaps = 8/251 (3%)
Query: 127 VLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLL 186
V + +ALL V + F LF D+ + +GI PD+ Y +I++ + L A ++
Sbjct: 192 VRTLSALLHGLVKFRHFGLAMELFDDMIN-VGIRPDVYIYTGVIRSLCELKDLSRAKEMI 250
Query: 187 YEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIE 246
+ME G ++++ +N L+ G + +A I + + ++P+V +Y + GL
Sbjct: 251 VQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKV 310
Query: 247 KQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS---GCGMNKAIF 303
++ + LE++ EM +P +L++G G +EEA + G N ++
Sbjct: 311 QEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVY 370
Query: 304 KLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA----KELVE 359
L+ +C+ + D A L R + +++D + +++ A E+++
Sbjct: 371 NALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMID 430
Query: 360 LGKTNSYCRYN 370
+G S YN
Sbjct: 431 MGLKPSVYPYN 441
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/306 (20%), Positives = 138/306 (45%), Gaps = 13/306 (4%)
Query: 24 IGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRF-RWIEEILEH 82
+ +++ G+ K + ++ F ++G R + IYTG ++ L K R E I++
Sbjct: 195 LSALLHGLVKFRHFGLAMELFDDMINVG-IRPDVYIYTGVIRSLCELKDLSRAKEMIVQM 253
Query: 83 QKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKK 142
+ D++ + + L K ++E A + ++ G+ + V+++ L+ ++
Sbjct: 254 EATGCDVNIVPYNVLIDGLCKKQKVWE-AVGIKKDLAGKELKPDVVTYCTLVCGLCKVQE 312
Query: 143 FDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFN 202
F EV D +L P + +++++ +G ++ A L+ + + G+ ++ +N
Sbjct: 313 F-EVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYN 371
Query: 203 TLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
L+ F +AE +++ M + + PN +Y+ +D + AL +GEM
Sbjct: 372 ALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDM 431
Query: 263 EINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKAIFKLLVPFV------CEKGDL 316
+ P V+ + +LI G G++ A+ + +NK + +V + C KG +
Sbjct: 432 GLKPSVYPYNSLINGHCKFGDISAAESLMAEM---INKKLEPTVVTYTSLMGGYCSKGKI 488
Query: 317 DFAFNL 322
+ A L
Sbjct: 489 NKALRL 494
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 84/197 (42%), Gaps = 3/197 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I K F+ A ++D M C +++ A++ + +E + L +
Sbjct: 688 MIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGN 747
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTL-LYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
+ P+ V+Y + + KG D + L+ KG+ + T+N L+ GF GR +
Sbjct: 748 SV-PNQVTYGCFLD-ILTKGVGDMKKAVELHNAILKGLLANTATYNMLIRGFCRQGRMEE 805
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
A ++ M+ V P+ +Y + L KKA+EL M K I PD + LI
Sbjct: 806 ASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIH 865
Query: 277 GFVNEGNLEEAKRWYNK 293
G G + +A N+
Sbjct: 866 GCCVAGEMGKATELRNE 882
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 56/113 (49%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ + +YN +I+ F +G ++ A+ L+ M G+ D IT+ T++ A
Sbjct: 782 GLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKA 841
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
++W +M +RP+ +YN + G + + KA EL EM + + P+ T
Sbjct: 842 IELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTET 894
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 89/200 (44%), Gaps = 3/200 (1%)
Query: 130 FNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEM 189
F+ L+ V S++ + +FK + K+ + P++ + + ++ V A L +M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMMTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDM 218
Query: 190 EKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQT 249
GIR D+ + ++ + A+++ M N+ YN +DGL +++
Sbjct: 219 INVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKV 278
Query: 250 KKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLL 306
+A+ + ++ KE+ PDV T+ L+ G E + + ++A L
Sbjct: 279 WEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSL 338
Query: 307 VPFVCEKGDLDFAFNLCKRT 326
V + ++G ++ A NL KR
Sbjct: 339 VEGLRKRGKVEEALNLVKRV 358
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 87/198 (43%), Gaps = 4/198 (2%)
Query: 166 YNTIIKAFV-DKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
++ +I+ +V + LD M K + ++ T + LL G F A ++++ M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMMTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDM 218
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
+N+ +RP+V Y + L K +A E++ +M + + ++ + LI G + +
Sbjct: 219 INVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKV 278
Query: 285 EEA---KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLV 341
EA K+ + + LV +C+ + + + R +A + +
Sbjct: 279 WEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSL 338
Query: 342 VDRLAKELRVEEAKELVE 359
V+ L K +VEEA LV+
Sbjct: 339 VEGLRKRGKVEEALNLVK 356
>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Glycine max]
Length = 615
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 149/322 (46%), Gaps = 15/322 (4%)
Query: 62 GTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARL----IALYG--KAAMFENARKVF 115
G L R R +E I Y ++ G+ ++ + ++G KA NAR VF
Sbjct: 213 GCENLLRRVVRLRPVE-IERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVF 271
Query: 116 DEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVD 175
DE+P R TV+SFN L+ C S +E L K + G+ PD+ +++ +I
Sbjct: 272 DEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRL-KGVMESEGVCPDVFTFSALINGLCK 330
Query: 176 KGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRS 235
+G LD + L EM +G+ + +TF TL+ G G+ A K ++ M+ VRP++ +
Sbjct: 331 EGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVT 390
Query: 236 YNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA---KRWYN 292
YNA ++GL K+A LV EM + + PD TF LI G +G++E A KR
Sbjct: 391 YNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMV 450
Query: 293 KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVE 352
+ G ++ F L+ +C +G + A + S D +V+D K+ V+
Sbjct: 451 EEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVK 510
Query: 353 EA----KELVELGKTNSYCRYN 370
KE+ G YN
Sbjct: 511 MGFKLLKEMQSDGHVPGVVTYN 532
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 87/185 (47%), Gaps = 1/185 (0%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K + A K F M + ++++NAL+ E L ++ G++PD
Sbjct: 365 KGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTAS-GLKPDK 423
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
+++ T+I G ++SA + M ++GI LD + F L+ G GR DA ++
Sbjct: 424 ITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTD 483
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M++ +P+ +Y +D + K +L+ EM+S P V T+ AL+ G +G
Sbjct: 484 MLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQ 543
Query: 284 LEEAK 288
++ AK
Sbjct: 544 MKNAK 548
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 64/135 (47%), Gaps = 1/135 (0%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
E+A ++ M E ++F AL+ + + + D+ G +PD +Y
Sbjct: 439 MESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDM-LSAGFKPDDPTYT 497
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
+I F KG + LL EM+ G ++T+N L+ G G+ +A+ + + M+N+
Sbjct: 498 MVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNV 557
Query: 228 NVRPNVRSYNARLDG 242
V PN +YN LDG
Sbjct: 558 GVAPNDITYNILLDG 572
>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 138/290 (47%), Gaps = 10/290 (3%)
Query: 86 YKDISKEGFTAR------LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
Y +I + GF + LI + K +A+ +F+E+ R T +SFN L+
Sbjct: 211 YSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCK 270
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
S+ DE L K + I PD+ +Y+ +I +G LD A L EM+++G+R + I
Sbjct: 271 SRNLDEGFRLKKTMEEN-RIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGI 329
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
TF L+ G Y + R A + M+ M V+P++ YN L+GL KA +LV EM
Sbjct: 330 TFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEM 389
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLEEA---KRWYNKSGCGMNKAIFKLLVPFVCEKGDL 316
+ + PD T+ LI G+ EG+LE A ++ N+ G ++ F L+ C G +
Sbjct: 390 KMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRV 449
Query: 317 DFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKTNSY 366
A + D A +V+D K+ V+ +L++ + N +
Sbjct: 450 RDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGH 499
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 125/264 (47%), Gaps = 6/264 (2%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I G+ K NL + KK+ + R + Y+ + L R E++ + +Q
Sbjct: 263 TLINGLCKSRNLDEGF-RLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQ 321
Query: 86 YKDISKEG--FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKF 143
+ + G FTA + Y ++ ++A + +M + ++ +N LL
Sbjct: 322 -RGLRPNGITFTALIDGQY-RSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDV 379
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT 203
++ L ++ +G++PD ++Y T+I + +G L+SA + M ++G+ LD + F
Sbjct: 380 NKARKLVDEM-KMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTA 438
Query: 204 LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
L+ GF +GR DAE+ MV ++P+ +Y +DG + K +L+ EM+
Sbjct: 439 LISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQING 498
Query: 264 INPDVFTFYALIKGFVNEGNLEEA 287
P V T+ L+ G +G ++ A
Sbjct: 499 HKPGVITYNVLMNGLCKQGQMKNA 522
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 83/196 (42%), Gaps = 4/196 (2%)
Query: 168 TIIKAFVDKGSLDSANTLLYE-MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVN 226
+II+ V + DSA ++ ++ G R F+ L++ ++ +G +DA + + + N
Sbjct: 122 SIIRFLVSRKGKDSAASVFAAILDTAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRN 181
Query: 227 MNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEE 286
N + LD + E+ P V + LI F EG++ +
Sbjct: 182 SNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRD 241
Query: 287 AKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVD 343
AK +N K G F L+ +C+ +LD F L K R D +++
Sbjct: 242 AKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIH 301
Query: 344 RLAKELRVEEAKELVE 359
L KE R++ A++L +
Sbjct: 302 GLCKEGRLDVAEQLFD 317
>gi|413952776|gb|AFW85425.1| chloroplast RNA splicing4 [Zea mays]
Length = 1435
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 135/270 (50%), Gaps = 8/270 (2%)
Query: 95 TARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLP 154
A ++ + G+A A +VF G TV FNA++G S +FD+ L D
Sbjct: 191 VAVVLGVLGRARQDSIAEEVFLRFAGEGA--TVQVFNAMMGVYARSGRFDDARQLL-DTM 247
Query: 155 HKLGIEPDLVSYNTIIKAFVDKGSLDS--ANTLLYEMEKKGIRLDLITFNTLLLGFYSNG 212
H GI+PDLVS+NT+I A G L + A LL+E+ + G+R D+IT+NTL+ +
Sbjct: 248 HDRGIDPDLVSFNTLINARSKSGCLAAGVALDLLFEVRQSGLRPDVITYNTLISACSQSS 307
Query: 213 RFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFY 272
DA ++E M+ RP++ +YNA + + ++A L E+ K PD T+
Sbjct: 308 NLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFRELVEKGFMPDAITYN 367
Query: 273 ALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSE 329
+L+ F EGN+++ + K+G N+ + ++ + G LD A L +
Sbjct: 368 SLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAM 427
Query: 330 RCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
C D +++D L K R+ EA +++E
Sbjct: 428 GCTPDAVTYTVMIDSLGKMNRIAEAGKVLE 457
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 138/281 (49%), Gaps = 6/281 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI+ +++ E+A VF++M C + ++NA++ K +E + LF++L K
Sbjct: 299 LISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFRELVEK- 357
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G PD ++YN+++ AF +G++D ++ K G + + IT+NT++ + GR A
Sbjct: 358 GFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTMIHMYGKMGRLDLA 417
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+++ M M P+ +Y +D L + +A +++ +M + P + F ALI
Sbjct: 418 VGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMTDAGLKPTLIAFSALICA 477
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
+ G +A+ ++ SG ++ + +++ GD + L ++ ++ D
Sbjct: 478 YAKGGRRADAENTFDCMIASGVKPDRLAYLVMLDVFARSGDTEKMLCLYRKMMNDNYRPD 537
Query: 335 QAPLQLVVDRLAKELRVEEAKELVELGKTNSYCRYNLKFPS 375
Q+++ LAKE + EE +E+++ CR NL S
Sbjct: 538 DDMYQVLLVALAKEDKCEEIEEVIQ--DMELLCRMNLGIIS 576
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 104/237 (43%), Gaps = 13/237 (5%)
Query: 81 EHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTV--------LSFNA 132
E ++ ++++ ++GF I + ++ A++ + CEQ V +++N
Sbjct: 346 EAERLFRELVEKGFMPDAITY--NSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNT 403
Query: 133 LLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKK 192
++ + D GL+ ++ +G PD V+Y +I + + A +L +M
Sbjct: 404 MIHMYGKMGRLDLAVGLYDEM-RAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMTDA 462
Query: 193 GIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKA 252
G++ LI F+ L+ + GR ADAE ++ M+ V+P+ +Y LD A T+K
Sbjct: 463 GLKPTLIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYLVMLDVFARSGDTEKM 522
Query: 253 LELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSG--CGMNKAIFKLLV 307
L L +M + PD + L+ E EE + C MN I ++
Sbjct: 523 LCLYRKMMNDNYRPDDDMYQVLLVALAKEDKCEEIEEVIQDMELLCRMNLGIISTML 579
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 116/284 (40%), Gaps = 18/284 (6%)
Query: 19 TGP----KFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFR 74
TGP + ++R + + L L ++ D+ N I TV L +A F
Sbjct: 809 TGPLPTVDSVNGMMRALIVDGRLDELYVVVEELQDM-----NFKISKSTVLLLLDA--FA 861
Query: 75 WIEEILEHQKQYKDISKEGFTA------RLIALYGKAAMFENARKVFDEMPGRNCEQTVL 128
++ E K Y + G+ +I+L F + + EM G + +
Sbjct: 862 KAGDVFEVMKIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAGFKPDLA 921
Query: 129 SFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
NALL + FD +++ + + G+EPD +YNT+I + + TLL E
Sbjct: 922 ILNALLNMYTAAGNFDRTTQVYRSI-LEAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNE 980
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
M K+G+ L ++ +LL A++I+E M + + + N Y+ +
Sbjct: 981 MGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKIYRNAGN 1040
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN 292
KA L+ M+ I P + T + L+ + G EA+ N
Sbjct: 1041 HSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPREAENVLN 1084
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 117/277 (42%), Gaps = 15/277 (5%)
Query: 98 LIALYGKAAMFENARKVFDEM-PGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHK 156
+I YGK +++ A + + ++ + +NAL+ A S +++ +F ++ K
Sbjct: 752 IIEAYGKIKLWQQAEILVKGLRQASGIDRRI--WNALIHAYAESGLYEKARAVFDNMI-K 808
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
G P + S N +++A + G LD ++ E++ ++ T LL F G +
Sbjct: 809 TGPLPTVDSVNGMMRALIVDGRLDELYVVVEELQDMNFKISKSTVLLLLDAFAKAGDVFE 868
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
KI+ M PN+ Y + + L + + ++ EM PD+ AL+
Sbjct: 869 VMKIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLN 928
Query: 277 GFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLC----KRTFSE 329
+ GN + + Y ++G ++ + L+ C + F L KR +
Sbjct: 929 MYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTP 988
Query: 330 RCLVDQAPLQLVVDRLAKELRVEEAKELVELGKTNSY 366
+ Q+ L+ ELR E+A ++ E ++ SY
Sbjct: 989 KL---QSYKSLLAASAKAELR-EQADQIFEEMRSKSY 1021
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 40/232 (17%), Positives = 96/232 (41%), Gaps = 9/232 (3%)
Query: 88 DISKEGFTARL------IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSK 141
++ K G T +L +A KA + E A ++F+EM ++ + ++ ++ N+
Sbjct: 980 EMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKIYRNAG 1039
Query: 142 KFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITF 201
+ + L + GIEP + + + ++ ++ G A +L ++ + + + +
Sbjct: 1040 NHSKAENLLAVMKED-GIEPTIATMHILMTSYGTAGQPREAENVLNNLKSSSLEVSTLPY 1098
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS 261
+T+ + NG + M V P+ + + + ++ +QT A+ L+ ++
Sbjct: 1099 STVFDAYLKNGDYNHGTTKLLEMKRDGVEPDHQVWTCFIRAASLCEQTADAILLLKSLQD 1158
Query: 262 KEINPDVFTFYALIKGFVNE--GNLEEAKRWYNKSGCGMNKAIFKLLVPFVC 311
+ + ++E LEE + + + A+ LL F C
Sbjct: 1159 CGFDLPIRLLTERTPSLLSEIANYLEELEALEDSAALNFVNAVEDLLWAFEC 1210
>gi|414588908|tpg|DAA39479.1| TPA: chloroplast RNA splicing4 [Zea mays]
Length = 1438
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 135/270 (50%), Gaps = 8/270 (2%)
Query: 95 TARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLP 154
A ++ + G+A A +VF G TV FNA++G S +FD+ L D
Sbjct: 191 VAVVLGVLGRARQDSIAEEVFLRFAGEGA--TVQVFNAMMGVYARSGRFDDARQLL-DTM 247
Query: 155 HKLGIEPDLVSYNTIIKAFVDKGSLDS--ANTLLYEMEKKGIRLDLITFNTLLLGFYSNG 212
H GI+PDLVS+NT+I A G L + A LL+E+ + G+R D+IT+NTL+ +
Sbjct: 248 HDRGIDPDLVSFNTLINARSKSGCLAAGVALDLLFEVRQSGLRPDVITYNTLISACSQSS 307
Query: 213 RFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFY 272
DA ++E M+ RP++ +YNA + + ++A L E+ K PD T+
Sbjct: 308 NLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFRELVEKGFMPDAITYN 367
Query: 273 ALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSE 329
+L+ F EGN+++ + K+G N+ + ++ + G LD A L +
Sbjct: 368 SLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAM 427
Query: 330 RCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
C D +++D L K R+ EA +++E
Sbjct: 428 GCTPDAVTYTVMIDSLGKMNRIAEAGKVLE 457
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 138/281 (49%), Gaps = 6/281 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI+ +++ E+A VF++M C + ++NA++ K +E + LF++L K
Sbjct: 299 LISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFRELVEK- 357
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G PD ++YN+++ AF +G++D ++ K G + + IT+NT++ + GR A
Sbjct: 358 GFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTMIHMYGKMGRLDLA 417
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+++ M M P+ +Y +D L + +A +++ +M + P + F ALI
Sbjct: 418 VGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMTDAGLKPTLIAFSALICA 477
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
+ G +A+ ++ SG ++ + +++ GD + L ++ ++ D
Sbjct: 478 YAKGGRRADAENTFDCMIASGVKPDRLAYLVMLDVFARSGDTEKMLCLYRKMMNDNYRPD 537
Query: 335 QAPLQLVVDRLAKELRVEEAKELVELGKTNSYCRYNLKFPS 375
Q+++ LAKE + EE +E+++ CR NL S
Sbjct: 538 DDMYQVLLVALAKEDKCEEIEEVIQ--DMELLCRMNLGIIS 576
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 104/237 (43%), Gaps = 13/237 (5%)
Query: 81 EHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTV--------LSFNA 132
E ++ ++++ ++GF I + ++ A++ + CEQ V +++N
Sbjct: 346 EAERLFRELVEKGFMPDAITY--NSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNT 403
Query: 133 LLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKK 192
++ + D GL+ ++ +G PD V+Y +I + + A +L +M
Sbjct: 404 MIHMYGKMGRLDLAVGLYDEM-RAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMTDA 462
Query: 193 GIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKA 252
G++ LI F+ L+ + GR ADAE ++ M+ V+P+ +Y LD A T+K
Sbjct: 463 GLKPTLIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYLVMLDVFARSGDTEKM 522
Query: 253 LELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSG--CGMNKAIFKLLV 307
L L +M + PD + L+ E EE + C MN I ++
Sbjct: 523 LCLYRKMMNDNYRPDDDMYQVLLVALAKEDKCEEIEEVIQDMELLCRMNLGIISTML 579
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 116/284 (40%), Gaps = 18/284 (6%)
Query: 19 TGP----KFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFR 74
TGP + ++R + + L L ++ D+ N I TV L +A F
Sbjct: 809 TGPLPTVDSVNGMMRALIVDGRLDELYVVVEELQDM-----NFKISKSTVLLLLDA--FA 861
Query: 75 WIEEILEHQKQYKDISKEGFTA------RLIALYGKAAMFENARKVFDEMPGRNCEQTVL 128
++ E K Y + G+ +I+L F + + EM G + +
Sbjct: 862 KAGDVFEVMKIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAGFKPDLA 921
Query: 129 SFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
NALL + FD +++ + + G+EPD +YNT+I + + TLL E
Sbjct: 922 ILNALLNMYTAAGNFDRTTQVYRSIL-EAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNE 980
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
M K+G+ L ++ +LL A++I+E M + + + N Y+ +
Sbjct: 981 MGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKIYRNAGN 1040
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN 292
KA L+ M+ I P + T + L+ + G EA+ N
Sbjct: 1041 HSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPREAENVLN 1084
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 117/277 (42%), Gaps = 15/277 (5%)
Query: 98 LIALYGKAAMFENARKVFDEM-PGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHK 156
+I YGK +++ A + + ++ + +NAL+ A S +++ +F ++ K
Sbjct: 752 IIEAYGKIKLWQQAEILVKGLRQASGIDRRI--WNALIHAYAESGLYEKARAVFDNMI-K 808
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
G P + S N +++A + G LD ++ E++ ++ T LL F G +
Sbjct: 809 TGPLPTVDSVNGMMRALIVDGRLDELYVVVEELQDMNFKISKSTVLLLLDAFAKAGDVFE 868
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
KI+ M PN+ Y + + L + + ++ EM PD+ AL+
Sbjct: 869 VMKIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLN 928
Query: 277 GFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLC----KRTFSE 329
+ GN + + Y ++G ++ + L+ C + F L KR +
Sbjct: 929 MYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTP 988
Query: 330 RCLVDQAPLQLVVDRLAKELRVEEAKELVELGKTNSY 366
+ Q+ L+ ELR E+A ++ E ++ SY
Sbjct: 989 KL---QSYKSLLAASAKAELR-EQADQIFEEMRSKSY 1021
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 40/232 (17%), Positives = 96/232 (41%), Gaps = 9/232 (3%)
Query: 88 DISKEGFTARL------IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSK 141
++ K G T +L +A KA + E A ++F+EM ++ + ++ ++ N+
Sbjct: 980 EMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKIYRNAG 1039
Query: 142 KFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITF 201
+ + L + GIEP + + + ++ ++ G A +L ++ + + + +
Sbjct: 1040 NHSKAENLLAVMKED-GIEPTIATMHILMTSYGTAGQPREAENVLNNLKSSSLEVSTLPY 1098
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS 261
+T+ + NG + M V P+ + + + ++ +QT A+ L+ ++
Sbjct: 1099 STVFDAYLKNGDYNHGTTKLLEMKRDGVEPDHQVWTCFIRAASLCEQTADAILLLKSLQD 1158
Query: 262 KEINPDVFTFYALIKGFVNE--GNLEEAKRWYNKSGCGMNKAIFKLLVPFVC 311
+ + ++E LEE + + + A+ LL F C
Sbjct: 1159 CGFDLPIRLLTERTPSLLSEIANYLEELEALEDSAALNFVNAVEDLLWAFEC 1210
>gi|242062404|ref|XP_002452491.1| hypothetical protein SORBIDRAFT_04g026810 [Sorghum bicolor]
gi|241932322|gb|EES05467.1| hypothetical protein SORBIDRAFT_04g026810 [Sorghum bicolor]
Length = 468
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 162/361 (44%), Gaps = 11/361 (3%)
Query: 6 RLLSCSFSTTATATGPKFI--GSVIRGIYKENNLKRLVDKFKK--SSDLGRFRTNTGIYT 61
R LS + STT T P R + +E + R+V ++ + T +
Sbjct: 19 RRLSSALSTTTGGTDPGATPFSDAKRQLRRERDPDRVVSILDAIDTASISAASTRHALSL 78
Query: 62 GTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVF-DEMPG 120
+RL+ ++RF E +L + E A ++ Y A + E A F P
Sbjct: 79 A-ARRLSLSRRFAEAEALLSSHLTASNT--ETHLAAVLCCYAAANLPEKAIDAFRSAAPS 135
Query: 121 RNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLD 180
+ L FNALL V +++ V LF +L + I PD SY ++KA+
Sbjct: 136 LPAPISPLPFNALLSTFVRCRRYRRVPVLFAELSKEFSITPDATSYAILVKAYCMNRDDA 195
Query: 181 SANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARL 240
A +L M ++GI + +L+ Y +AE +W+ MV P+V +YN +
Sbjct: 196 KAKQVLDLMREQGISPTASIYTSLIDSMYKRKMTNEAESLWKEMVESGCEPDVVTYNVKA 255
Query: 241 DGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCG 297
+ ++ +E++ EM + + P+ T+ L+ + G LE+AK Y+ + GC
Sbjct: 256 LYYMAHGKPEEVIEVMTEMEAAGLKPNTITYNYLMISYCKSGKLEDAKVLYHSLAEKGCS 315
Query: 298 MNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
+ +K ++ +C GD D + K + +R + D ++ +V+ LAK RV +AKE+
Sbjct: 316 ADAYTYKHMLAELCAHGDFDAGLGIFKDSLKKRKVPDFRTMKRLVEGLAKGGRVADAKEV 375
Query: 358 V 358
+
Sbjct: 376 I 376
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 82/167 (49%), Gaps = 2/167 (1%)
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
+T+ + ++Y K M A ++ EM CE V+++N + K +EV + ++
Sbjct: 216 YTSLIDSMY-KRKMTNEAESLWKEMVESGCEPDVVTYNVKALYYMAHGKPEEVIEVMTEM 274
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
G++P+ ++YN ++ ++ G L+ A L + + +KG D T+ +L ++G
Sbjct: 275 -EAAGLKPNTITYNYLMISYCKSGKLEDAKVLYHSLAEKGCSADAYTYKHMLAELCAHGD 333
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMR 260
F I++ + P+ R+ ++GLA + A E++ E++
Sbjct: 334 FDAGLGIFKDSLKKRKVPDFRTMKRLVEGLAKGGRVADAKEVIAEVK 380
>gi|224129154|ref|XP_002320514.1| predicted protein [Populus trichocarpa]
gi|222861287|gb|EEE98829.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 157/342 (45%), Gaps = 11/342 (3%)
Query: 12 FSTTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAK 71
FS + P+ S+ + N + D F + D G T L++
Sbjct: 120 FSYRMCDSSPRVFDSLFKTYAHMNKFRNATDVFSRMKDYGFLPT----VESCNAYLSSLL 175
Query: 72 RFRWIEEILEHQKQYKD--ISKEGFTARLI-ALYGKAAMFENARKVFDEMPGRNCEQTVL 128
F ++ L ++ + IS +T L+ + K+ E A +V EM V+
Sbjct: 176 DFHRVDIALTFYREMRRCRISPNSYTFNLVLSALCKSGKLEKAVEVLREMESVGITPNVV 235
Query: 129 SFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
S+N L+ N K + K+L K G+EP++V++N++I F +G L AN E
Sbjct: 236 SYNTLIAGHCN-KGLLSIATKLKNLMGKNGLEPNVVTFNSLIHGFCKEGKLHEANRFFSE 294
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
M+ + + +T+NTL+ G+ G A K++E M+ V+ ++ +YNA + GL E +
Sbjct: 295 MKVMNVTPNTVTYNTLINGYGQVGNSNMAGKVYEEMMRNGVKADILTYNALILGLCKEGK 354
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKL 305
TKKA LV E+ + + P+ T+ ALI G N + A + Y +SGC N+ FK+
Sbjct: 355 TKKAAFLVKELDKENLVPNASTYSALISGQCARKNSDRAFQLYKSMVRSGCHPNEQTFKM 414
Query: 306 LVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAK 347
L + D + AFN+ F+ D L + D L +
Sbjct: 415 LTSAFVKNEDFEGAFNVLMDMFARSMASDSNTLLEIYDGLCQ 456
>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
Length = 692
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 123/266 (46%), Gaps = 5/266 (1%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
F +A +V +++ R C V + N +L A + DE L +DLP G EPD+VSYN
Sbjct: 210 FRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLP-SFGCEPDVVSYN 268
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
++K L+ EM + +++TFNTL+ NG F ++ MV
Sbjct: 269 AVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEH 328
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
P++R Y +DG+ E + A E++ M S + P+V + L+KG + EE
Sbjct: 329 GCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEET 388
Query: 288 KRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDR 344
+ + C ++ F +LV F C+ G +D L ++ C+ D V++
Sbjct: 389 EELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVING 448
Query: 345 LAKELRVEEAKELVELGKTNSYCRYN 370
KE ++EA L++ T C+ N
Sbjct: 449 FCKEGLIDEAVMLLK-SMTACGCKPN 473
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 139/323 (43%), Gaps = 18/323 (5%)
Query: 49 DLGRFRTNTGI--YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAA 106
DL F + Y ++ L AKR+ ++E++E + LI+ +
Sbjct: 254 DLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNG 313
Query: 107 MFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSY 166
+FE +V +M C + + ++ + + +P G++P++V Y
Sbjct: 314 LFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMP-SYGLKPNVVCY 372
Query: 167 NTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVN 226
NT++K + LL EM K LD +TFN L+ F NG ++ E M+
Sbjct: 373 NTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLE 432
Query: 227 MNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEE 286
P+V +Y ++G E +A+ L+ M + P+ ++ ++KG +
Sbjct: 433 HGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCS------ 486
Query: 287 AKRWYN---------KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAP 337
A+RW + + GC +N F L+ F+C+KG ++ A L K+ C D
Sbjct: 487 AERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLIS 546
Query: 338 LQLVVDRLAKELRVEEAKELVEL 360
V+D L K + +EA EL+ +
Sbjct: 547 YSTVIDGLGKAGKTDEALELLNV 569
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/358 (19%), Positives = 144/358 (40%), Gaps = 72/358 (20%)
Query: 73 FRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNA 132
F + E+L ++ A +I K E A ++ + MP + V+ +N
Sbjct: 315 FERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNT 374
Query: 133 LLGACVNSKKFDEVDGLF-----KDLPH-----------------------------KLG 158
LL ++++++E + L KD P + G
Sbjct: 375 LLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHG 434
Query: 159 IEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAE 218
PD+++Y T+I F +G +D A LL M G + + I++ +L G S R+ DAE
Sbjct: 435 CMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAE 494
Query: 219 KIWETMVNM-----------------------------------NVRPNVRSYNARLDGL 243
+ M+ P++ SY+ +DGL
Sbjct: 495 DLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGL 554
Query: 244 AIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNK 300
+T +ALEL+ M +K ++P+ + ++ EG + + + ++ + +
Sbjct: 555 GKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDA 614
Query: 301 AIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
++ ++ +C++G+ + A S C+ +++ +++ LA E V+EA+E++
Sbjct: 615 VLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEML 672
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 113/264 (42%), Gaps = 7/264 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
++A Y +A E+AR++ +P T F + C + D + + ++P +
Sbjct: 133 MVAGYCRAGQLESARRLAAAVPVPPNAYTY--FPVVRALCARGRIADAL-AVLDEMPRR- 188
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G P Y+ I++A G SA +L ++ +G LD+ N +L G +A
Sbjct: 189 GCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEA 248
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ + + P+V SYNA L GL + K+ EL+ EM P++ TF LI
Sbjct: 249 LHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISY 308
Query: 278 FVNEGNLE---EAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
G E E + GC + ++ ++ +C++G L+ A + R S +
Sbjct: 309 LCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPN 368
Query: 335 QAPLQLVVDRLAKELRVEEAKELV 358
++ L R EE +EL+
Sbjct: 369 VVCYNTLLKGLCSAERWEETEELL 392
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 105/237 (44%), Gaps = 2/237 (0%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
+VI G KE + V K + G + NT YT ++ L +A+R+ E+++ Q
Sbjct: 444 TVINGFCKEGLIDEAVMLLKSMTACG-CKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQ 502
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
LI K + E A ++ +M C ++S++ ++ + K DE
Sbjct: 503 QGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDE 562
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
L + +K G+ P+ + Y++I A +G ++ + ++ IR D + +N ++
Sbjct: 563 ALELLNVMVNK-GMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVI 621
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
G A + MV+ PN +Y + GLA E K+A E++ E+ SK
Sbjct: 622 SSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSK 678
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/269 (31%), Positives = 130/269 (48%), Gaps = 6/269 (2%)
Query: 93 GFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKD 152
+ A L+AL A +AR+ FD M V ++N L+ A E + +D
Sbjct: 125 AYNAVLLAL--SDASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRD 182
Query: 153 LPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNG 212
+ G +P+ V+YNT++ AF G +D A L+ M + G++ +L+TFN+++ G G
Sbjct: 183 M-RGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAG 241
Query: 213 RFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFY 272
R DA K+++ MV + P+ SYN + G + +AL + EM K I PDV TF
Sbjct: 242 RMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFT 301
Query: 273 ALIKGFVNEGNLEEA---KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSE 329
+LI GNLE A R + G MN+ F L+ C+KG LD A +
Sbjct: 302 SLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQC 361
Query: 330 RCLVDQAPLQLVVDRLAKELRVEEAKELV 358
R +++ R++EA+ELV
Sbjct: 362 RIQPSVVCYNALINGYCMVGRMDEARELV 390
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 125/257 (48%), Gaps = 4/257 (1%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
KA E+ARKVFDEM +S+N L+G E +F ++ K GI PD+
Sbjct: 239 KAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRK-GIMPDV 297
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
V++ ++I G+L+ A L+ EM ++G++++ ITF L+ GF G DA
Sbjct: 298 VTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVRE 357
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M ++P+V YNA ++G + + +A ELV EM +K + PDV T+ ++ + G+
Sbjct: 358 MRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGD 417
Query: 284 LEEA---KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL 340
A + ++G + + L+ +CE+ L A L K S D+
Sbjct: 418 THSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTS 477
Query: 341 VVDRLAKELRVEEAKEL 357
++D KE VE A L
Sbjct: 478 LIDGHCKEGNVERALSL 494
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 111/216 (51%), Gaps = 5/216 (2%)
Query: 75 WIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL 134
+ E+ E Q +I+ FTA LI + K ++A EM + +V+ +NAL+
Sbjct: 319 LVREMRERGLQMNEIT---FTA-LIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALI 374
Query: 135 GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGI 194
+ DE L +++ K G++PD+V+Y+TI+ A+ G SA L +M + G+
Sbjct: 375 NGYCMVGRMDEARELVREMEAK-GVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGV 433
Query: 195 RLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALE 254
D IT+++L+ R DA +++ M+++ ++P+ +Y + +DG E ++AL
Sbjct: 434 LPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALS 493
Query: 255 LVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
L EM + PDV T+ LI G +EA+R
Sbjct: 494 LHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRL 529
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 117/248 (47%), Gaps = 19/248 (7%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI Y + AR++ EM + + V++++ +L A + L + +
Sbjct: 373 LINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLEN- 431
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ PD ++Y+++I+ ++ L A+ L M G++ D +T+ +L+ G G A
Sbjct: 432 GVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERA 491
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINP----------- 266
+ + MV V P+V +Y+ ++GL+ +TK+A L+ ++ +E P
Sbjct: 492 LSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRC 551
Query: 267 ----DVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFA 319
++ + AL+KGF +G + EA + Y ++ +++ +L+ C +G++ A
Sbjct: 552 CRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKA 611
Query: 320 FNLCKRTF 327
+ K+
Sbjct: 612 LSFHKQML 619
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/248 (19%), Positives = 104/248 (41%), Gaps = 54/248 (21%)
Query: 128 LSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLY 187
+++++L+ K+ + LFK++ LG++PD V+Y ++I +G+++ A +L
Sbjct: 438 ITYSSLIRVLCEEKRLGDAHVLFKNMI-SLGLQPDEVTYTSLIDGHCKEGNVERALSLHD 496
Query: 188 EMEKKGIRLDLITFNTL------------------------------------------- 204
EM K G+ D++T++ L
Sbjct: 497 EMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAE 556
Query: 205 -------LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
L GF G +A+K+++++++ N + Y+ + G E KAL
Sbjct: 557 LKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHK 616
Query: 258 EMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK--SGCGMNKA-IFKLLVPFVCEKG 314
+M P+ + +LI+G +G + EA + + + C + A K L+ ++G
Sbjct: 617 QMLQCGFAPNSTSTISLIRGLFEKGMVVEADQVIQQLLNCCSLADAEASKALIDLNLKEG 676
Query: 315 DLDFAFNL 322
++D ++
Sbjct: 677 NVDAVLDV 684
>gi|449456671|ref|XP_004146072.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
mitochondrial-like [Cucumis sativus]
gi|449503658|ref|XP_004162112.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
mitochondrial-like [Cucumis sativus]
Length = 411
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 96/325 (29%), Positives = 164/325 (50%), Gaps = 19/325 (5%)
Query: 21 PKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEIL 80
P + ++I+ I +++ + ++ D ++ N IYT V RLA + F IE+++
Sbjct: 58 PNEVINIIQQIQHPSSVLAFLHQWSNRKD---YKPNKEIYTLVVSRLAEGRLFDDIEKVM 114
Query: 81 EHQKQYKDIS-KEGFTARLIALYGK-AAMFENARKVFDEMPGRNCEQTVLSFNALLGACV 138
K ++ + F +I +YG A A +MP NC +V +FN +L V
Sbjct: 115 LRIKAERNFRLSDEFFYHVIKIYGNVAGRLNKAIDTLFDMPNYNCWPSVKTFNFVLNLLV 174
Query: 139 NSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL 198
++K FD V ++ P KLGIE D N ++K G+LD+A +L E ++ R ++
Sbjct: 175 SAKMFDVVHEVYMGAP-KLGIEIDACCLNILVKGLCQSGNLDAALKVLDEFPQQRCRPNV 233
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
TF+TLL G NG A +++ M N V P+ ++N + GL +K+ ++A+EL+G
Sbjct: 234 RTFSTLLHGLCENGELGRALELFCKMENEGVCPDTITFNILISGLRKKKRIEEAIELLGR 293
Query: 259 MRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKAIFKLLVP-FVCEKGDLD 317
M+ K P+ T+ ++ G ++ G EA+ C M++ I + + P FV K L
Sbjct: 294 MKLKGCYPNAGTYQEVLYGLLDTGKFIEAR------DC-MHRMISEGMDPSFVSYKKLLS 346
Query: 318 FAFNLCKRTFSERCLVDQAPLQLVV 342
LCK+ +E VD Q+V+
Sbjct: 347 ---GLCKKKLTED--VDWVLKQMVM 366
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 86/182 (47%), Gaps = 2/182 (1%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
++ + A KV DE P + C V +F+ LL + + LF + ++ G+ PD
Sbjct: 210 QSGNLDAALKVLDEFPQQRCRPNVRTFSTLLHGLCENGELGRALELFCKMENE-GVCPDT 268
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
+++N +I K ++ A LL M+ KG + T+ +L G G+F +A
Sbjct: 269 ITFNILISGLRKKKRIEEAIELLGRMKLKGCYPNAGTYQEVLYGLLDTGKFIEARDCMHR 328
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M++ + P+ SY L GL +K T+ ++ +M + P V + +++ ++ GN
Sbjct: 329 MISEGMDPSFVSYKKLLSGLCKKKLTEDVDWVLKQMVMQGFVPKVGMWKVILRCMLS-GN 387
Query: 284 LE 285
E
Sbjct: 388 EE 389
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 68/159 (42%), Gaps = 5/159 (3%)
Query: 205 LLGFYSN--GRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
++ Y N GR A M N N P+V+++N L+ L K E+
Sbjct: 133 VIKIYGNVAGRLNKAIDTLFDMPNYNCWPSVKTFNFVLNLLVSAKMFDVVHEVYMGAPKL 192
Query: 263 EINPDVFTFYALIKGFVNEGNLEEAKRW---YNKSGCGMNKAIFKLLVPFVCEKGDLDFA 319
I D L+KG GNL+ A + + + C N F L+ +CE G+L A
Sbjct: 193 GIEIDACCLNILVKGLCQSGNLDAALKVLDEFPQQRCRPNVRTFSTLLHGLCENGELGRA 252
Query: 320 FNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
L + +E D +++ L K+ R+EEA EL+
Sbjct: 253 LELFCKMENEGVCPDTITFNILISGLRKKKRIEEAIELL 291
>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 127/259 (49%), Gaps = 4/259 (1%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K M A+ VF+ M + E V ++NAL+ + + DE LF + K G P +
Sbjct: 199 KEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRK-GCAPSV 257
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
SYN +IK G +D A LL EM K + D +T++TL+ GF +GR DA+K+ E
Sbjct: 258 RSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEE 317
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M + + P++ +Y+ LDGL + +A EL+ M+ +I P++F + LI+G N G
Sbjct: 318 MRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGK 377
Query: 284 LEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL 340
LE A+ ++ G + + +++ + + G + A L + CL + +
Sbjct: 378 LEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNV 437
Query: 341 VVDRLAKELRVEEAKELVE 359
++ + A L+E
Sbjct: 438 IIQGFLRNGDTSNAGRLIE 456
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 141/291 (48%), Gaps = 10/291 (3%)
Query: 78 EILEHQKQYKDISKEGFTARLIA----LYGKAAMFEN--ARKVFDEMPGRNCEQTVLSFN 131
+I++ K + ++ K G+ +I + G M A ++ +M + C+ V+ ++
Sbjct: 62 KIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYS 121
Query: 132 ALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEK 191
++ + K E ++ ++ GI P++V+Y++I+ F + G + A +L +M +
Sbjct: 122 TIIDSLCKDKLITEAMEFLSEMVNR-GISPNVVTYSSILHGFCNLGRSNEATSLFKQMVE 180
Query: 192 KGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKK 251
+ + D +TFN L+ G G +A+ ++ETM+ V PNV +YNA +DG + Q +
Sbjct: 181 RNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDE 240
Query: 252 ALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW---YNKSGCGMNKAIFKLLVP 308
A +L M K P V ++ LIKG G ++EAK + + + L+
Sbjct: 241 AQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMK 300
Query: 309 FVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
C+ G A L + S L D +V+D L K+ ++EA EL++
Sbjct: 301 GFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLK 351
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 76/138 (55%)
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
KLG++P+ V+++T++ K + A L EM K G D+IT++T++ G G
Sbjct: 40 KLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTT 99
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
A ++ + M +PNV Y+ +D L +K +A+E + EM ++ I+P+V T+ +++
Sbjct: 100 MAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSIL 159
Query: 276 KGFVNEGNLEEAKRWYNK 293
GF N G EA + +
Sbjct: 160 HGFCNLGRSNEATSLFKQ 177
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 99/206 (48%), Gaps = 5/206 (2%)
Query: 159 IEPDLVSYNTIIKAFV--DKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
I PD+ + +I F + A ++L M K G++ + +TF+TLL G S + D
Sbjct: 6 IRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIID 65
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
A K+++ MV M P+V +Y+ ++GL T A++L+ +M K P+V + +I
Sbjct: 66 AVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIID 125
Query: 277 GFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV 333
+ + EA + ++ G N + ++ C G + A +L K+ +
Sbjct: 126 SLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMP 185
Query: 334 DQAPLQLVVDRLAKELRVEEAKELVE 359
D ++VD L+KE + EA+ + E
Sbjct: 186 DTVTFNILVDGLSKEGMILEAQCVFE 211
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 76/166 (45%), Gaps = 1/166 (0%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
++A+K+ +EM +++++ +L DE L K + IEP++ Y
Sbjct: 309 QDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQES-KIEPNIFIYTI 367
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
+I+ + G L++A L + KGI+ D++T+ ++ G G +A +++ M
Sbjct: 368 LIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHG 427
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYAL 274
PN +YN + G T A L+ EM + + D TF L
Sbjct: 428 CLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADSSTFQML 473
>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
Length = 818
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 141/308 (45%), Gaps = 5/308 (1%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMP 119
YT ++ L ++R++ +EE+L E ++ + + + A +V D M
Sbjct: 359 YTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMS 418
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL 179
C +++++++L + + D+ L L G +PD ++Y T++K
Sbjct: 419 EHGCVADIVTYSSILDGLCDVGRVDDAVELLSRL-KSYGCKPDTIAYTTVLKGLCSTEQW 477
Query: 180 DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNAR 239
+ A L+ EM D +TFNT++ G A ++ E M P++ +YN
Sbjct: 478 ERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCI 537
Query: 240 LDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGC 296
+DGL E A+EL+ +++S PD+ TF L+KG E+A++ +S C
Sbjct: 538 IDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNC 597
Query: 297 GMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKE 356
++ F ++ +C+KG L A K C+ + + +VVD L K + + A E
Sbjct: 598 PPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALE 657
Query: 357 LVELGKTN 364
L+ G TN
Sbjct: 658 LLS-GMTN 664
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 132/300 (44%), Gaps = 42/300 (14%)
Query: 97 RLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHK 156
R + + G+ +A VFD+M R C +V++++ LL A + + L ++ K
Sbjct: 259 RALCVRGR---IPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAK 315
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
G EPD+V+YN +I A ++G +D A +L + G + D +T+ +L + R+ +
Sbjct: 316 -GCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKE 374
Query: 217 AEKIWETMVNMNVRP-----------------------------------NVRSYNARLD 241
E++ M + N P ++ +Y++ LD
Sbjct: 375 VEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILD 434
Query: 242 GLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGM 298
GL + A+EL+ ++S PD + ++KG + E A+ + S C
Sbjct: 435 GLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPP 494
Query: 299 NKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
++ F +V +C+KG +D A + ++ C D ++D L E +++A EL+
Sbjct: 495 DEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELL 554
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 140/338 (41%), Gaps = 63/338 (18%)
Query: 81 EHQKQYKDI-----------SKEGFTARLIALYGKAAMFENARKVFDEMP---GRNCEQT 126
E Q Q+ D EG RL +L + + E A +FD M GRNC
Sbjct: 129 EQQDQHVDTKWRRQPRAPPRRGEGAKRRLRSLVQRGEIDE-ALVLFDSMASGGGRNCPP- 186
Query: 127 VLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLL 186
V+ N L+ + + + + +F LG +V+YNT++ + G ++ A L+
Sbjct: 187 VVPCNILIKRLCSDGRVSDAERVFA----ALGPSATVVTYNTMVNGYCRAGRIEDARRLI 242
Query: 187 YEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIE 246
M D TFN L+ GR DA +++ M++ P+V +Y+ LD E
Sbjct: 243 NGMP---FPPDTFTFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKE 299
Query: 247 KQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA------------------- 287
++A+ L+ EMR+K PD+ T+ LI NEG+++EA
Sbjct: 300 SGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTY 359
Query: 288 ----------KRW---------YNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFS 328
+RW + C ++ F +V +C++G +D A +
Sbjct: 360 TPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSE 419
Query: 329 ERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKTNSY 366
C+ D ++D L RV++A EL L + SY
Sbjct: 420 HGCVADIVTYSSILDGLCDVGRVDDAVEL--LSRLKSY 455
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 86/214 (40%), Gaps = 32/214 (14%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALL----------------------GACVNSKKFD- 144
+E+A ++ M NC L+FN ++ G NS +
Sbjct: 582 WEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSI 641
Query: 145 EVDGLFKDLPHKLGIE---------PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIR 195
VD L K + +E PDL++YNT+I G ++ A LL M G+
Sbjct: 642 VVDALLKAGKAQAALELLSGMTNGTPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLC 701
Query: 196 LDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALEL 255
D T+ +L G A ++ + + + P+ YN L G +++T A++
Sbjct: 702 PDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDC 761
Query: 256 VGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
M S PD T+ L++ G L+EAKR
Sbjct: 762 FAHMVSSGCMPDESTYVILLEALAYGGLLDEAKR 795
>gi|294461967|gb|ADE76539.1| unknown [Picea sitchensis]
Length = 486
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 149/321 (46%), Gaps = 4/321 (1%)
Query: 41 VDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIA 100
++ F+ +S F+ + Y + +L A++F+ +E +++ ++ G +I
Sbjct: 117 MEIFEVASRQPGFKHSYSTYHTLICKLGRARQFKTMEGLIQQMRKDGCPYTPGLFVDIIE 176
Query: 101 LYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIE 160
+YG+ M A K F +M E FN LL + K + LFK L H+ GI
Sbjct: 177 IYGEVGMPNEAIKAFHQMLEFGYEPLAKHFNVLLIVLIEHKCLETALSLFKKL-HEFGIS 235
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
P+ +YN +I+A L A L +M K+G D+ T++ L+ G + A +
Sbjct: 236 PNTRTYNILIRAHCHSDKLSHAYFLFNKMHKQGCIPDVETYSILMQGLCRKSQVKTALGV 295
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
+ M+N P+ +YN L+ L + ++A L+ +M+ NPDV + +I GF
Sbjct: 296 LDEMLNKGYVPDALTYNTLLNSLCRKMNLREAYRLLSKMKVMGCNPDVINYNTVITGFCR 355
Query: 281 EGNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAP 337
EG +A R ++GC N ++ LV +C +G D A + + S + +
Sbjct: 356 EGRALDACQILRDMPENGCLPNALSYRTLVNGLCNEGKFDEAKDFVEEMISNGFIPHISI 415
Query: 338 LQLVVDRLAKELRVEEAKELV 358
L++ L E +V EA E++
Sbjct: 416 YHLLITGLCNEGKVGEACEVL 436
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 105/218 (48%), Gaps = 4/218 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + + +A +F++M + C V +++ L+ + G+ ++ +K
Sbjct: 244 LIRAHCHSDKLSHAYFLFNKMHKQGCIPDVETYSILMQGLCRKSQVKTALGVLDEMLNK- 302
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G PD ++YNT++ + K +L A LL +M+ G D+I +NT++ GF GR DA
Sbjct: 303 GYVPDALTYNTLLNSLCRKMNLREAYRLLSKMKVMGCNPDVINYNTVITGFCREGRALDA 362
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+I M PN SY ++GL E + +A + V EM S P + ++ LI G
Sbjct: 363 CQILRDMPENGCLPNALSYRTLVNGLCNEGKFDEAKDFVEEMISNGFIPHISIYHLLITG 422
Query: 278 FVNEGNLEEAKR---WYNKSGCGMNKAIFKLLVPFVCE 312
NEG + EA K +++ + +L+ +CE
Sbjct: 423 LCNEGKVGEACEVLVMMTKQTLAPHESTWSVLLMRICE 460
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 85/182 (46%), Gaps = 1/182 (0%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
+ + + A V DEM + L++N LL + E L + +G PD+
Sbjct: 285 RKSQVKTALGVLDEMLNKGYVPDALTYNTLLNSLCRKMNLREAYRLLSKMK-VMGCNPDV 343
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
++YNT+I F +G A +L +M + G + +++ TL+ G + G+F +A+ E
Sbjct: 344 INYNTVITGFCREGRALDACQILRDMPENGCLPNALSYRTLVNGLCNEGKFDEAKDFVEE 403
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M++ P++ Y+ + GL E + +A E++ M + + P T+ L+ +
Sbjct: 404 MISNGFIPHISIYHLLITGLCNEGKVGEACEVLVMMTKQTLAPHESTWSVLLMRICEDSQ 463
Query: 284 LE 285
E
Sbjct: 464 TE 465
>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
gi|224033903|gb|ACN36027.1| unknown [Zea mays]
Length = 655
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 123/266 (46%), Gaps = 5/266 (1%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
F +A +V +++ R C V + N +L A + DE L +DLP G EPD+VSYN
Sbjct: 173 FRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLP-SFGCEPDVVSYN 231
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
++K L+ EM + +++TFNTL+ NG F ++ MV
Sbjct: 232 AVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEH 291
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
P++R Y +DG+ E + A E++ M S + P+V + L+KG + EE
Sbjct: 292 GCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEET 351
Query: 288 KRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDR 344
+ + C ++ F +LV F C+ G +D L ++ C+ D V++
Sbjct: 352 EELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVING 411
Query: 345 LAKELRVEEAKELVELGKTNSYCRYN 370
KE ++EA L++ T C+ N
Sbjct: 412 FCKEGLIDEAVMLLK-SMTACGCKPN 436
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 135/310 (43%), Gaps = 16/310 (5%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMP 119
Y ++ L AKR+ ++E++E + LI+ + +FE +V +M
Sbjct: 230 YNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMV 289
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL 179
C + + ++ + + +P G++P++V YNT++K
Sbjct: 290 EHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMP-SYGLKPNVVCYNTLLKGLCSAERW 348
Query: 180 DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNAR 239
+ LL EM K LD +TFN L+ F NG ++ E M+ P+V +Y
Sbjct: 349 EETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTV 408
Query: 240 LDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN------- 292
++G E +A+ L+ M + P+ ++ ++KG + A+RW +
Sbjct: 409 INGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCS------AERWVDAEDLMSQ 462
Query: 293 --KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELR 350
+ GC +N F L+ F+C+KG ++ A L K+ C D V+D L K +
Sbjct: 463 MIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGK 522
Query: 351 VEEAKELVEL 360
+EA EL+ +
Sbjct: 523 TDEALELLNV 532
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/375 (20%), Positives = 155/375 (41%), Gaps = 75/375 (20%)
Query: 22 KFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILE 81
+ ++I GI KE +L+ + + G + N Y ++ L +A+R+ EE+L
Sbjct: 298 RMYATIIDGICKEGHLEVAHEILNRMPSYG-LKPNVVCYNTLLKGLCSAERWEETEELL- 355
Query: 82 HQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSK 141
A MF+ ++C ++FN L+ +
Sbjct: 356 -----------------------AEMFD-----------KDCPLDDVTFNILVDFFCQNG 381
Query: 142 KFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITF 201
D V L + + + G PD+++Y T+I F +G +D A LL M G + + I++
Sbjct: 382 LVDRVIELLEQMLER-GCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISY 440
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNM---------------------------------- 227
+L G S R+ DAE + M+
Sbjct: 441 TIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLV 500
Query: 228 -NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEE 286
P++ SY+ +DGL +T +ALEL+ M +K ++P+ + ++ EG + +
Sbjct: 501 NGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINK 560
Query: 287 AKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVD 343
+ ++ + + ++ ++ +C++G+ + A S C+ +++ +++
Sbjct: 561 VIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIR 620
Query: 344 RLAKELRVEEAKELV 358
LA E V+EA+E++
Sbjct: 621 GLASEGFVKEAQEML 635
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 113/264 (42%), Gaps = 7/264 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
++A Y +A E+AR++ +P T F + C + D + + ++P +
Sbjct: 96 MVAGYCRAGQLESARRLAAAVPVPPNAYTY--FPVVRALCARGRIADAL-AVLDEMPRR- 151
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G P Y+ I++A G SA +L ++ +G LD+ N +L G +A
Sbjct: 152 GCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEA 211
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ + + P+V SYNA L GL + K+ EL+ EM P++ TF LI
Sbjct: 212 LHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISY 271
Query: 278 FVNEGNLE---EAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
G E E + GC + ++ ++ +C++G L+ A + R S +
Sbjct: 272 LCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPN 331
Query: 335 QAPLQLVVDRLAKELRVEEAKELV 358
++ L R EE +EL+
Sbjct: 332 VVCYNTLLKGLCSAERWEETEELL 355
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 105/237 (44%), Gaps = 2/237 (0%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
+VI G KE + V K + G + NT YT ++ L +A+R+ E+++ Q
Sbjct: 407 TVINGFCKEGLIDEAVMLLKSMTACG-CKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQ 465
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
LI K + E A ++ +M C ++S++ ++ + K DE
Sbjct: 466 QGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDE 525
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
L + +K G+ P+ + Y++I A +G ++ + ++ IR D + +N ++
Sbjct: 526 ALELLNVMVNK-GMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVI 584
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
G A + MV+ PN +Y + GLA E K+A E++ E+ SK
Sbjct: 585 SSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSK 641
>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
Length = 653
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 125/267 (46%), Gaps = 5/267 (1%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGA-CVNSKKFDEVDGLFKDLPHKLGIEPDLVSY 166
F +A +V ++ GR C V + N +L A C DE L +DLP G +PD+VSY
Sbjct: 169 FRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSY 228
Query: 167 NTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVN 226
N ++K L+ EM + G +++TFNTL+ NG F ++ MV+
Sbjct: 229 NAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVD 288
Query: 227 MNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEE 286
P++R Y LDG+ E + A E++ M S + P+V + ++KG + E+
Sbjct: 289 HGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQ 348
Query: 287 AKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVD 343
A+ + + C ++ F +LV F C+ G + L ++ C+ D V++
Sbjct: 349 AEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVIN 408
Query: 344 RLAKELRVEEAKELVELGKTNSYCRYN 370
KE ++EA L++ CR N
Sbjct: 409 GFCKEGLIDEAVMLLK-SMAACGCRPN 434
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 133/310 (42%), Gaps = 16/310 (5%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMP 119
Y ++ L AKR+ +++++E + LI + +FE +V +M
Sbjct: 228 YNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMV 287
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL 179
C + + +L + + +P G++P++V YNT++K
Sbjct: 288 DHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMP-SYGLKPNVVCYNTVLKGLCSAERW 346
Query: 180 DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNAR 239
+ A LL EM LD +TFN L+ F NG ++ E M+ P+V +Y
Sbjct: 347 EQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTV 406
Query: 240 LDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN------- 292
++G E +A+ L+ M + P+ ++ ++KG + A+RW +
Sbjct: 407 INGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCS------AERWVDAEDLMSQ 460
Query: 293 --KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELR 350
+ GC N F ++ F+C+KG ++ A L K+ C D V+D L K +
Sbjct: 461 MIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGK 520
Query: 351 VEEAKELVEL 360
+EA EL+ +
Sbjct: 521 TDEALELLNV 530
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 83/376 (22%), Positives = 153/376 (40%), Gaps = 77/376 (20%)
Query: 22 KFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILE 81
+ +V+ G+ KE +L+ + + G + N Y ++ L +A+R+ EE+L
Sbjct: 296 RMYATVLDGVCKEGHLEVAHEILDRMPSYG-LKPNVVCYNTVLKGLCSAERWEQAEELL- 353
Query: 82 HQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGA-CVNS 140
A MF+N +C ++FN L+ C N
Sbjct: 354 -----------------------AEMFDN-----------DCPLDDVTFNILVDFFCQNG 379
Query: 141 KKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLIT 200
+ ++ L + L H G PD+++Y T+I F +G +D A LL M G R + I+
Sbjct: 380 LVYRVIELLEQMLEH--GCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTIS 437
Query: 201 FNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMR 260
+ +L G S R+ DAE + M+ PN ++N ++ L + ++A+EL+ +M
Sbjct: 438 YTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQML 497
Query: 261 SKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFK------------- 304
+PD+ ++ +I G G +EA N G N I+
Sbjct: 498 LNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRIN 557
Query: 305 ----------------------LLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVV 342
++ +C++G D A S C+ +++ +++
Sbjct: 558 RVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILI 617
Query: 343 DRLAKELRVEEAKELV 358
LA E V+EA+E++
Sbjct: 618 RGLASEGFVKEAQEML 633
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 108/239 (45%), Gaps = 6/239 (2%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIE-EILEHQK 84
+VI G KE + V K + G R NT YT ++ L +A+R W++ E L Q
Sbjct: 405 TVINGFCKEGLIDEAVMLLKSMAACG-CRPNTISYTIVLKGLCSAER--WVDAEDLMSQM 461
Query: 85 QYKDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKF 143
+ S T +I K + E A ++ +M C ++S++ ++ + K
Sbjct: 462 IEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKT 521
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT 203
DE L + +K G+ P+ + Y++I A +G ++ + ++ IR D + +N
Sbjct: 522 DEALELLNVMVNK-GMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNA 580
Query: 204 LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
++ G A + MV+ PN +Y + GLA E K+A E++ E+ SK
Sbjct: 581 VISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQEMLTELCSK 639
>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 566
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 130/254 (51%), Gaps = 4/254 (1%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
++A +VFDEM R ++++N L+G K +E + + + GI P+L++YNT
Sbjct: 285 KDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSD-GINPNLITYNT 343
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
+I F G L A +L +++ +G+ L+T+N L+ GF G + A K+ + M
Sbjct: 344 LIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERG 403
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
++P+ +Y +D A +KA++L M + PDV T+ LI GF +G + EA
Sbjct: 404 IKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEAS 463
Query: 289 RWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRL 345
R + + C N+ I+ ++ C++G A L K + + A + +++ L
Sbjct: 464 RLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVL 523
Query: 346 AKELRVEEAKELVE 359
KE + +EA+ LVE
Sbjct: 524 CKERKSKEAERLVE 537
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 99/201 (49%), Gaps = 4/201 (1%)
Query: 127 VLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLL 186
V SF L+ C + + ++ L +L + G P++V Y T+I KG ++ A L
Sbjct: 163 VYSFGILIKGCCEAGEIEKSFDLLIELT-EFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221
Query: 187 YEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIE 246
+EM K G+ + T+ L+ G + NG +++E M V PN+ +YN ++ L +
Sbjct: 222 FEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKD 281
Query: 247 KQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIF 303
+TK A ++ EMR + ++ ++ T+ LI G E L EA + ++ G N +
Sbjct: 282 GRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITY 341
Query: 304 KLLVPFVCEKGDLDFAFNLCK 324
L+ C G L A +LC+
Sbjct: 342 NTLIDGFCGVGKLGKALSLCR 362
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 140/319 (43%), Gaps = 42/319 (13%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
+I G++K K+ + ++K + G F N Y + +L R + ++ + ++
Sbjct: 239 LINGLFKNGVKKQGFEMYEKMQEDGVF-PNLYTYNCVMNQLCKDGRTKDAFQVFDEMRE- 296
Query: 87 KDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
+ +S T LI + A KV D+M ++++N L+ K +
Sbjct: 297 RGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGK 356
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRL--------- 196
L +DL + G+ P LV+YN ++ F KG A ++ EME++GI+
Sbjct: 357 ALSLCRDLKSR-GLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILI 415
Query: 197 --------------------------DLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
D+ T++ L+ GF G+ +A +++++MV N
Sbjct: 416 DTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCE 475
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
PN YN + G E + +AL+L+ EM KE+ P+V ++ +I+ E +EA+R
Sbjct: 476 PNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERL 535
Query: 291 YNK---SGCGMNKAIFKLL 306
K SG + +I L+
Sbjct: 536 VEKMIDSGIDPSTSILSLI 554
>gi|224117008|ref|XP_002317451.1| predicted protein [Populus trichocarpa]
gi|222860516|gb|EEE98063.1| predicted protein [Populus trichocarpa]
Length = 461
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 150/312 (48%), Gaps = 7/312 (2%)
Query: 53 FRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDIS-KEGFTARLIALYGKAAMFENA 111
FR + Y + +L AK F ++EIL K+ + KE +I YG+A + ENA
Sbjct: 41 FRYSLLSYDLIITKLGRAKMFNEMQEILAQLKEETLFTPKEALFCDIINFYGRARLPENA 100
Query: 112 RKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIK 171
K+ E+P ++TV S+N+LL + K FD++ LF + KLG + D +YN +I+
Sbjct: 101 LKLLVELPSFRVQRTVKSYNSLLSVFLMCKDFDKMRELFVGI-EKLG-KADACTYNLLIR 158
Query: 172 AFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM-NVR 230
F G LD A+ + EM +G+ ++ITF L+ GF + R +A K+ MV + V
Sbjct: 159 GFCASGRLDDASKVFDEMTNRGVSPNVITFGNLIYGFCLHLRLKEAFKLKTDMVKVYRVY 218
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA-KR 289
PN Y + + G+ + A L EM +I D + LI G G EEA
Sbjct: 219 PNAYIYASLIKGVCKNGELSLAFRLKKEMIRNKIELDPAIYSTLISGLFKAGRKEEALGV 278
Query: 290 WYN--KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAK 347
W + + G + + +++ C+ D + A+ L + C D +++ L +
Sbjct: 279 WEDMKERGYKPDTVTYNVIINLFCKDKDFEAAYRLLDEMVEKGCKPDVISYNVILRELFE 338
Query: 348 ELRVEEAKELVE 359
E + EA +L E
Sbjct: 339 EGKRGEANDLFE 350
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 101/218 (46%), Gaps = 5/218 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSF-NALLGACVNSKKFDEVDGLFKDLPHK 156
LI + + ++A KVFDEM R V++F N + G C++ + E L D+
Sbjct: 156 LIRGFCASGRLDDASKVFDEMTNRGVSPNVITFGNLIYGFCLHL-RLKEAFKLKTDMVKV 214
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
+ P+ Y ++IK G L A L EM + I LD ++TL+ G + GR +
Sbjct: 215 YRVYPNAYIYASLIKGVCKNGELSLAFRLKKEMIRNKIELDPAIYSTLISGLFKAGRKEE 274
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
A +WE M +P+ +YN ++ +K + A L+ EM K PDV ++ +++
Sbjct: 275 ALGVWEDMKERGYKPDTVTYNVIINLFCKDKDFEAAYRLLDEMVEKGCKPDVISYNVILR 334
Query: 277 GFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVC 311
EG EA + + GC + +++L C
Sbjct: 335 ELFEEGKRGEANDLFEDMPRRGCAPDVVSYRILFDGFC 372
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 112/245 (45%), Gaps = 11/245 (4%)
Query: 84 KQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKF 143
K Y+ A LI K A ++ EM E ++ L+ + +
Sbjct: 213 KVYRVYPNAYIYASLIKGVCKNGELSLAFRLKKEMIRNKIELDPAIYSTLISGLFKAGRK 272
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT 203
+E G+++D+ + G +PD V+YN II F ++A LL EM +KG + D+I++N
Sbjct: 273 EEALGVWEDMKER-GYKPDTVTYNVIINLFCKDKDFEAAYRLLDEMVEKGCKPDVISYNV 331
Query: 204 LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
+L + G+ +A ++E M P+V SY DG Q K+A ++ EM K
Sbjct: 332 ILRELFEEGKRGEANDLFEDMPRRGCAPDVVSYRILFDGFCNGMQFKEAAFILDEMIFKG 391
Query: 264 INPDVFTFYALIKGFVN---EGNLEEAKR-WYN--KSGCGMNKAIFKLLVPFVCEKGDLD 317
P A I FVN EG E+ R +N + G +N ++++ V V + L
Sbjct: 392 FVP----CSASICKFVNRLCEGKNEDLLRSAFNTLEKGKLVNVDLWRMAVAMVFKDDKLS 447
Query: 318 FAFNL 322
+FNL
Sbjct: 448 SSFNL 452
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 115/284 (40%), Gaps = 69/284 (24%)
Query: 119 PGRNCEQTVLSFNALLGACVNSKKFDEV----------------DGLFKDLPHKLG---- 158
P + ++LS++ ++ +K F+E+ + LF D+ + G
Sbjct: 37 PSKPFRYSLLSYDLIITKLGRAKMFNEMQEILAQLKEETLFTPKEALFCDIINFYGRARL 96
Query: 159 ---------------IEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT 203
++ + SYN+++ F+ D L +EK G + D T+N
Sbjct: 97 PENALKLLVELPSFRVQRTVKSYNSLLSVFLMCKDFDKMRELFVGIEKLG-KADACTYNL 155
Query: 204 LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM-RSK 262
L+ GF ++GR DA K+++ M N V PNV ++ + G + + K+A +L +M +
Sbjct: 156 LIRGFCASGRLDDASKVFDEMTNRGVSPNVITFGNLIYGFCLHLRLKEAFKLKTDMVKVY 215
Query: 263 EINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
+ P+ + + +LIKG VC+ G+L AF L
Sbjct: 216 RVYPNAYIYASLIKG--------------------------------VCKNGELSLAFRL 243
Query: 323 CKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKTNSY 366
K + +D A ++ L K R EEA + E K Y
Sbjct: 244 KKEMIRNKIELDPAIYSTLISGLFKAGRKEEALGVWEDMKERGY 287
>gi|413919532|gb|AFW59464.1| hypothetical protein ZEAMMB73_836837 [Zea mays]
Length = 365
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 128/248 (51%), Gaps = 6/248 (2%)
Query: 44 FKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYG 103
FKK+ ++ + +Y+ + RLA A+RF +EE+L + K + F RLI +YG
Sbjct: 58 FKKACSRRDYKPSEALYSLMIDRLACARRFSDVEELLSKARTEKLRFSDEFFYRLIKMYG 117
Query: 104 KAAMFENARKVFD---EMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIE 160
A E+ +K D MPG NC + +FN +L V ++++ V ++ P +LG+
Sbjct: 118 NVA--EHPQKAMDTLFAMPGYNCWPSTKTFNYVLHMLVCKRQYEVVHEVYSSAP-RLGVT 174
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
D S+N ++K G D A +LL+EM K+G + + T++T + + A ++
Sbjct: 175 LDTCSFNILVKGLCQYGKFDEAISLLHEMPKQGCQPNATTYSTFMHFLCQRSQVDKAFEL 234
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
+E M ++ + YN + GL +++ +A +L M S+ P+ T+ L+ G ++
Sbjct: 235 FERMRKQDIAADTVVYNILISGLCRDERVTEAFDLFKSMTSEGCCPNSGTYQVLLDGLIS 294
Query: 281 EGNLEEAK 288
G L EAK
Sbjct: 295 LGKLFEAK 302
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 103/254 (40%), Gaps = 8/254 (3%)
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL 179
GR + L+ N +L VN + ++ +FK + +P Y+ +I
Sbjct: 28 GRLDHKDWLAPNEVLKVFVNIRDTSLINSVFKKACSRRDYKPSEALYSLMIDRLACARRF 87
Query: 180 DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM---NVRPNVRSY 236
LL + + +R F L+ Y N +K +T+ M N P+ +++
Sbjct: 88 SDVEELLSKARTEKLRFS-DEFFYRLIKMYGNVA-EHPQKAMDTLFAMPGYNCWPSTKTF 145
Query: 237 NARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---K 293
N L L ++Q + E+ + D +F L+KG G +EA + K
Sbjct: 146 NYVLHMLVCKRQYEVVHEVYSSAPRLGVTLDTCSFNILVKGLCQYGKFDEAISLLHEMPK 205
Query: 294 SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEE 353
GC N + + F+C++ +D AF L +R + D +++ L ++ RV E
Sbjct: 206 QGCQPNATTYSTFMHFLCQRSQVDKAFELFERMRKQDIAADTVVYNILISGLCRDERVTE 265
Query: 354 AKELVELGKTNSYC 367
A +L + + C
Sbjct: 266 AFDLFKSMTSEGCC 279
>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 137/290 (47%), Gaps = 10/290 (3%)
Query: 86 YKDISKEGFTAR------LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
Y +I + GF + LI + K +A+ +F+E+ R T +SFN L+
Sbjct: 211 YSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCK 270
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
S+ DE L K + I PD+ +Y+ +I +G LD A L EM+++G+R + I
Sbjct: 271 SRNLDEGFRLKKTMEEN-RIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGI 329
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
TF L+ G + R A + M+ M V+P++ YN L+GL KA +LV EM
Sbjct: 330 TFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEM 389
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLEEA---KRWYNKSGCGMNKAIFKLLVPFVCEKGDL 316
R + PD T+ LI G+ EG+LE A ++ N+ G ++ F L+ C G +
Sbjct: 390 RMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRV 449
Query: 317 DFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKTNSY 366
A + D A +V+D K+ V+ +L++ + N +
Sbjct: 450 RDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGH 499
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 123/263 (46%), Gaps = 4/263 (1%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I G+ K NL + KK+ + R + Y+ + L R E++ + +Q
Sbjct: 263 TLINGLCKSRNLDEGF-RLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQ 321
Query: 86 YKDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
+ + G T LI ++ ++A + +M + ++ +N LL +
Sbjct: 322 -RGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVN 380
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
+ L ++ +G++PD ++Y T+I + +G L+SA + M ++G+ LD + F L
Sbjct: 381 KARKLVDEM-RMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTAL 439
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+ GF +GR DAE+ MV ++P+ +Y +DG + K +L+ EM+
Sbjct: 440 ISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGH 499
Query: 265 NPDVFTFYALIKGFVNEGNLEEA 287
P V T+ L+ G +G ++ A
Sbjct: 500 KPGVITYNVLMNGLCKQGQMKNA 522
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 83/196 (42%), Gaps = 4/196 (2%)
Query: 168 TIIKAFVDKGSLDSANTLLYE-MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVN 226
+II+ V + DSA ++ ++ G R F+ L++ ++ +G +DA + + + N
Sbjct: 122 SIIRFLVSRKGKDSAASVFAAILDTAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRN 181
Query: 227 MNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEE 286
N + LD + E+ P V + LI F EG++ +
Sbjct: 182 SNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRD 241
Query: 287 AKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVD 343
AK +N K G F L+ +C+ +LD F L K R D +++
Sbjct: 242 AKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIH 301
Query: 344 RLAKELRVEEAKELVE 359
L KE R++ A++L +
Sbjct: 302 GLCKEGRLDVAEQLFD 317
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 76/231 (32%), Positives = 116/231 (50%), Gaps = 6/231 (2%)
Query: 93 GFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKD 152
+ A L+AL A +AR+ FD M V ++N L+ A E + +D
Sbjct: 158 AYNAVLLAL--SDASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSILRD 215
Query: 153 LPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNG 212
+ G P++V+YNT++ AF G +D A L+ M + G++ +L+TFN+++ G G
Sbjct: 216 M-RGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAG 274
Query: 213 RFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFY 272
+ DA K+++ MV + P+ SYN + G + +AL + EM K I PDV TF
Sbjct: 275 KMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFT 334
Query: 273 ALIKGFVNEGNLEEA---KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAF 320
+LI GNLE A R + G MN+ F L+ C+KG LD A
Sbjct: 335 SLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDAL 385
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 141/293 (48%), Gaps = 39/293 (13%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
KA E+ARKVFDEM +S+N L+G + E +F ++ K GI PD+
Sbjct: 272 KAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQK-GIMPDV 330
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
V++ ++I G+L+ A TL+ +M ++G++++ +TF L+ GF G DA
Sbjct: 331 VTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRG 390
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGF----- 278
M ++P+V YNA ++G + + +A EL+ EM +K + PDV T+ +I +
Sbjct: 391 MKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCD 450
Query: 279 -----------VNEGNLEEAKRWYN--KSGCG---------MNKAIFKL----------- 305
+ +G L +A + + + CG + K + KL
Sbjct: 451 THSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTS 510
Query: 306 LVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
L+ C++G+++ A +L + L D ++++ L+K R EA++L+
Sbjct: 511 LIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLL 563
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 101/200 (50%), Gaps = 2/200 (1%)
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
FT+ LI + KA E A + +M R + ++F AL+ D+ + +
Sbjct: 333 FTS-LIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGM 391
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
+ I+P +V YN +I + G +D A LL+EME KG++ D++T++T++ + N
Sbjct: 392 -KQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCD 450
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
A ++ + M+ V P+ +Y++ + L EK+ A L M + PD FT+ +
Sbjct: 451 THSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTS 510
Query: 274 LIKGFVNEGNLEEAKRWYNK 293
LI G EGN+E A ++K
Sbjct: 511 LIDGHCKEGNVESALSLHDK 530
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 136/322 (42%), Gaps = 56/322 (17%)
Query: 60 YTGTVQRLANAKRF-RWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEM 118
+T + + A R + + + +++ +++ FTA LI + K ++A M
Sbjct: 333 FTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTA-LIDGFCKKGFLDDALLAVRGM 391
Query: 119 PGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGS 178
+ +V+ +NAL+ + DE L ++ K G++PD+V+Y+TII A+
Sbjct: 392 KQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAK-GLKPDVVTYSTIISAYCKNCD 450
Query: 179 LDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNA 238
SA L +M +KG+ D IT+++L+ R +DA +++ M+ + ++P+ +Y +
Sbjct: 451 THSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTS 510
Query: 239 RLDGLAIEKQTKKALELVGEMRSKEINPDVFTF--------------------------- 271
+DG E + AL L +M + PDV T+
Sbjct: 511 LIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHED 570
Query: 272 -----------------------YALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKL 305
AL+KGF +G + EA + Y ++ +++ +
Sbjct: 571 PIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSV 630
Query: 306 LVPFVCEKGDLDFAFNLCKRTF 327
L+ C G++ A + K+
Sbjct: 631 LIHGHCRAGNVMKALSFHKQML 652
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/289 (19%), Positives = 116/289 (40%), Gaps = 53/289 (18%)
Query: 52 RFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFT-ARLIALYGKAAMFEN 110
R + + Y + R E+L H+ + K + + T + +I+ Y K +
Sbjct: 395 RIKPSVVCYNALINGYCMVGRMDEARELL-HEMEAKGLKPDVVTYSTIISAYCKNCDTHS 453
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A ++ +M + +++++L+ K+ + LFK++ KLG++PD +Y ++I
Sbjct: 454 AFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMI-KLGLQPDEFTYTSLI 512
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL-------------------------- 204
+G+++SA +L +M K G+ D++T++ L
Sbjct: 513 DGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPI 572
Query: 205 ------------------------LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARL 240
L GF G +A+K++++M++ N + Y+ +
Sbjct: 573 PANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLI 632
Query: 241 DGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
G KAL +M P+ + +LI+G G + EA +
Sbjct: 633 HGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQ 681
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 127/270 (47%), Gaps = 5/270 (1%)
Query: 93 GFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKD 152
+ A L+AL A +AR++ M V ++N L+ A + +E G+ D
Sbjct: 122 AYNAVLLAL--SDASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALGVVGD 179
Query: 153 LPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNG 212
G P++V+YNT++ AF G +D+A L+ M + G+R L+TFNT++ G G
Sbjct: 180 DMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAG 239
Query: 213 RFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFY 272
R DA K+++ M + P+ SYN + G +AL + EM K + PDV TF
Sbjct: 240 RMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFT 299
Query: 273 ALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSE 329
+LI GNLE A + G MN+ F L+ C G LD A K
Sbjct: 300 SLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMREC 359
Query: 330 RCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
R ++++ K R++EA+EL+
Sbjct: 360 RIQPSVVCYNVLINGYCKLGRMDEARELIH 389
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 127/257 (49%), Gaps = 4/257 (1%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
KA E+ARK+FDEM +S+N L+ + E +F ++ K G+ PD+
Sbjct: 237 KAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQK-GVVPDV 295
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
V++ ++I A G+L+ A L+ +M ++G+R++ TF L+ GF NG DA +
Sbjct: 296 VTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKE 355
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M ++P+V YN ++G + +A EL+ EM +K + PDV T+ ++ G+ G+
Sbjct: 356 MRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGD 415
Query: 284 LEEA---KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL 340
+ A R K G + + L+ +CE+ L A L ++ D+
Sbjct: 416 TDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTT 475
Query: 341 VVDRLAKELRVEEAKEL 357
++D KE V++A L
Sbjct: 476 LIDGHCKEGNVQKALSL 492
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 103/196 (52%), Gaps = 2/196 (1%)
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
FTA LI + + ++A EM + +V+ +N L+ + DE L ++
Sbjct: 333 FTA-LIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEM 391
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
K G++PD+V+Y+TI+ + G DSA L +M KKG+ D IT+++L+ G R
Sbjct: 392 EAK-GMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERR 450
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
DA +++E M+ + ++P+ +Y +DG E +KAL L EM K + PDV T+
Sbjct: 451 LGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSV 510
Query: 274 LIKGFVNEGNLEEAKR 289
LI G +EA+R
Sbjct: 511 LIDGLSKSARTKEAQR 526
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 152/331 (45%), Gaps = 36/331 (10%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
S+I + + NL+R V + + G R N +T + R ++++ L K+
Sbjct: 300 SLIHAMCRAGNLERAVALVGQMRERG-LRMNEFTFTALIDGFC---RNGFLDDALLAMKE 355
Query: 86 YKDISKEGFTA---RLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSK 141
++ + LI Y K + AR++ EM + + V++++ +L G C
Sbjct: 356 MRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYC---- 411
Query: 142 KFDEVDGLFKDLPHKL---GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL 198
K + D F +L K+ G+ PD ++Y+++I+ ++ L A L +M + G++ D
Sbjct: 412 KIGDTDSAF-ELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDE 470
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
T+ TL+ G G A + + M+ V P+V +Y+ +DGL+ +TK+A L+ +
Sbjct: 471 FTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFK 530
Query: 259 MRSKEINPDVFTF---------------YALIKGFVNEGNLEEAKRWYNK---SGCGMNK 300
+ ++ PD + AL+KGF +G + +A + Y ++
Sbjct: 531 LYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDG 590
Query: 301 AIFKLLVPFVCEKGDLDFAFNLCKRTFSERC 331
+++ +L+ C G++ A + K+ RC
Sbjct: 591 SVYSVLIHGHCRGGNIMKALSFHKQLL--RC 619
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 91/205 (44%), Gaps = 5/205 (2%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G P L++YN ++ A D SL SA LL M + G+ ++ T+N L+ + G+ +A
Sbjct: 115 GYAPSLLAYNAVLLALSD-ASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEA 173
Query: 218 -EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
+ + M PNV +YN + + A LVG MR + P + TF ++
Sbjct: 174 LGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVN 233
Query: 277 GFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV 333
G G +E+A++ ++ + G + + LV C+ G L A + + +
Sbjct: 234 GLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVP 293
Query: 334 DQAPLQLVVDRLAKELRVEEAKELV 358
D ++ + + +E A LV
Sbjct: 294 DVVTFTSLIHAMCRAGNLERAVALV 318
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/259 (18%), Positives = 107/259 (41%), Gaps = 52/259 (20%)
Query: 80 LEHQKQYKDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACV 138
L H+ + K + + T + +++ Y K ++A ++ +M + +++++L+
Sbjct: 387 LIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLC 446
Query: 139 NSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL 198
++ + LF+ + +LG++PD +Y T+I +G++ A +L EM KKG+ D+
Sbjct: 447 EERRLGDACELFEKML-QLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDV 505
Query: 199 ITFNTL--------------------------------------------------LLGF 208
+T++ L L GF
Sbjct: 506 VTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGF 565
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDV 268
G A+K++++M++ + + + Y+ + G KAL ++ +P+
Sbjct: 566 SMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNS 625
Query: 269 FTFYALIKGFVNEGNLEEA 287
+ +L++G EG EA
Sbjct: 626 TSTISLVRGLFEEGMTVEA 644
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 100/261 (38%), Gaps = 23/261 (8%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMP 119
Y+ ++ L +R E+ E Q E LI + K + A + DEM
Sbjct: 438 YSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMI 497
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTI---------- 169
+ V++++ L+ S + E L L ++ + PD + Y +
Sbjct: 498 KKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPV-PDNIKYEALMHCCRTAEFK 556
Query: 170 -----IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
+K F KG ++ A+ + M + +LD ++ L+ G G A + +
Sbjct: 557 SVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQL 616
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
+ PN S + + GL E T +A ++ E+ + D T ALI + N
Sbjct: 617 LRCGFSPNSTSTISLVRGLFEEGMTVEADNVIQELLNCCSLADAETSKALI-----DLNR 671
Query: 285 EEAKRWYNKSG--CGMNKAIF 303
+E ++ G C A+F
Sbjct: 672 KEGVGYFQAQGELCMQKPALF 692
>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 132/258 (51%), Gaps = 6/258 (2%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
E A ++ +EM G C +++++ L+ A + K DE G K++ +G+E DLV Y
Sbjct: 193 LEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKF-MGLEADLVVYT 251
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
++I+ F D G LD L E+ ++G IT+NTL+ GF G+ +A +I+E M+
Sbjct: 252 SLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIER 311
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
VRPNV +Y +DGL +TK+AL+L+ M K+ P+ T+ +I +G + +A
Sbjct: 312 GVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADA 371
Query: 288 ---KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL--VV 342
K + + +L+ +C KGDLD A L + D + ++
Sbjct: 372 VEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALI 431
Query: 343 DRLAKELRVEEAKELVEL 360
L KE R+ +A ++ +L
Sbjct: 432 HGLCKENRLHQALDIYDL 449
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 114/268 (42%), Gaps = 4/268 (1%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++IRG K LK + F+ + G R N YTG + L + + ++L +
Sbjct: 287 TLIRGFCKLGQLKEASEIFEFMIERG-VRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIE 345
Query: 86 YKDISKEGFTARLIA-LYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
KD T +I K + +A ++ + M R +++N LLG D
Sbjct: 346 -KDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLD 404
Query: 145 EVDGL-FKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT 203
E L + L +PD++SYN +I + L A + + +K D +T N
Sbjct: 405 EASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNI 464
Query: 204 LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
LL G A ++W+ + + + N +Y A +DG A L+ +MR E
Sbjct: 465 LLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSE 524
Query: 264 INPDVFTFYALIKGFVNEGNLEEAKRWY 291
+ P VF + L+ EG+L++A R +
Sbjct: 525 LQPSVFDYNCLLSSLCKEGSLDQAWRLF 552
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 127/281 (45%), Gaps = 13/281 (4%)
Query: 16 ATATGPKFIG--SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRF 73
++ T P I ++I G+ KEN L + +D + DL + G T L + +
Sbjct: 417 SSYTDPDVISYNALIHGLCKENRLHQALDIY----DLLVEKLGAGDRVTTNILLNSTLKA 472
Query: 74 RWIEEILEHQKQYKDI----SKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLS 129
+ + +E KQ D + + +TA +I + K M A+ + +M + +V
Sbjct: 473 GDVNKAMELWKQISDSKIVRNSDTYTA-MIDGFCKTGMLNVAKGLLCKMRVSELQPSVFD 531
Query: 130 FNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEM 189
+N LL + D+ LF+++ PD+VS+N +I + G + SA +LL M
Sbjct: 532 YNCLLSSLCKEGSLDQAWRLFEEMQRDNNF-PDVVSFNIMIDGSLKAGDIKSAESLLVGM 590
Query: 190 EKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQT 249
+ G+ DL T++ L+ F G +A ++ MV+ P+ ++ L + +T
Sbjct: 591 SRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGET 650
Query: 250 KKALELVGEMRSKEINPDVFTFYALIKGFVN-EGNLEEAKR 289
K ELV ++ K+I D ++ N N++ AKR
Sbjct: 651 DKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLAKR 691
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 3/205 (1%)
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
PD+ SYNT+I+ F + L+ A L EM+ G L+T+ L+ F G+ +A
Sbjct: 175 PDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGF 234
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
+ M M + ++ Y + + G + + L E+ + +P T+ LI+GF
Sbjct: 235 LKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCK 294
Query: 281 EGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAP 337
G L+EA + + G N + L+ +C G A L + +
Sbjct: 295 LGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVT 354
Query: 338 LQLVVDRLAKELRVEEAKELVELGK 362
+++++L K+ V +A E+VEL K
Sbjct: 355 YNIIINKLCKDGLVADAVEIVELMK 379
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 92/205 (44%), Gaps = 13/205 (6%)
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
+Y +I F G L+ A LL +M ++ + +N LL G A +++E M
Sbjct: 496 TYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEM 555
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
N P+V S+N +DG K A L+ M ++PD+FT+ LI F+ G L
Sbjct: 556 QRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYL 615
Query: 285 EEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLV 341
+EA +++K SG + I ++ + +G+ D L K+ + ++D+ V
Sbjct: 616 DEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTV 675
Query: 342 VDRLAKE----------LRVEEAKE 356
+D + LRV + KE
Sbjct: 676 MDYMCNSSANMDLAKRLLRVTDDKE 700
>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 806
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 118/239 (49%), Gaps = 4/239 (1%)
Query: 124 EQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSAN 183
E V +NAL+ +F E L ++ + G++P+++SY+T+I D G+++ +
Sbjct: 241 EPVVPVYNALIHGVCKECRFKEAFDLMNEMVDR-GVDPNVISYSTVISCLSDMGNVELSL 299
Query: 184 TLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
+ M +G R ++ TF +L+ GF+ GR DA +W M+ V PNV +YN + GL
Sbjct: 300 AVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGL 359
Query: 244 AIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNK 300
+ +A+ + +M I P+V T+ +I GF G+L A +NK GC N
Sbjct: 360 CSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNV 419
Query: 301 AIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
++ +V +C+ D AF+L S+ C + L + RVE A +++
Sbjct: 420 VVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLD 478
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 138/284 (48%), Gaps = 9/284 (3%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
V++ + +E+++ ++ FK S+ G F+ Y + +L + +L+ K
Sbjct: 44 VVKVLRQEHDIVSSLEYFKSLSNSGTFKHTHLTYETMIDKLGRNNEMDGVSYLLQQMKLE 103
Query: 87 KDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEV 146
+ +I Y ++ + E K+F + CE +V +N +L A ++ F +
Sbjct: 104 NVPCSQELFQFVIKCYRRSNLGEQGLKMFYRIREFGCEPSVKIYNLVLDALLSQNLFKMI 163
Query: 147 DGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLL 206
+ L+ ++ + G+EP++ +YN ++KA G +D A LL EM KG D +++ T++
Sbjct: 164 NALYNNMKSE-GLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVI- 221
Query: 207 GFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINP 266
S + D +K E + M P V YNA + G+ E + K+A +L+ EM + ++P
Sbjct: 222 --SSMCKLGDVDKARE--LAMKFEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDP 277
Query: 267 DVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLV 307
+V ++ +I + GN+E + + + GC N F L+
Sbjct: 278 NVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLI 321
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 115/258 (44%), Gaps = 11/258 (4%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANA----KRFRWIEEILE 81
++I G K +L + + K + G R N +YT V L + F I+ ++
Sbjct: 389 TIIYGFAKSGDLVSACETWNKMINCG-CRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMIS 447
Query: 82 HQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSK 141
I+ F L +A E A V D+M C + ++N LL +
Sbjct: 448 DGCPPTVITFNNFIKGLC----RAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRAN 503
Query: 142 KFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITF 201
F E GL ++L + +E D V+YNTI+ F G LL +M GI+LD IT
Sbjct: 504 AFREACGLIRELEER-KVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLVNGIKLDTITV 562
Query: 202 NTLLLGFYSNGRFADAEKIWETM-VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMR 260
NT + + G+ A K+ + + R ++ ++ L G+ T++A+ + EM
Sbjct: 563 NTTVNAYCKLGKVKTAIKVLDNISAEKEFRADIITHTIILWGICNWLGTEEAVVYLHEML 622
Query: 261 SKEINPDVFTFYALIKGF 278
+ I P++ T+ L++GF
Sbjct: 623 KRGIFPNIATWNVLVRGF 640
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 74/176 (42%), Gaps = 3/176 (1%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G P++V Y ++ D A L+ M G +ITFN + G GR A
Sbjct: 414 GCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWA 473
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ + M PN+R+YN LDGL ++A L+ E+ +++ D T+ ++ G
Sbjct: 474 MNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYG 533
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSER 330
F G ++ + K +G ++ V C+ G + A + +E+
Sbjct: 534 FSFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNISAEK 589
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 93/212 (43%), Gaps = 8/212 (3%)
Query: 150 FKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFY 209
FK L + + ++Y T+I +D + LL +M+ + + F ++ +
Sbjct: 61 FKSLSNSGTFKHTHLTYETMIDKLGRNNEMDGVSYLLQQMKLENVPCSQELFQFVIKCYR 120
Query: 210 SNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVF 269
+ K++ + P+V+ YN LD L + K L M+S+ + P+VF
Sbjct: 121 RSNLGEQGLKMFYRIREFGCEPSVKIYNLVLDALLSQNLFKMINALYNNMKSEGLEPNVF 180
Query: 270 TFYALIKGFVNEGNLEEAKRW---YNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRT 326
T+ L+K G ++ A + + GC + + ++ +C+ GD+D A L +
Sbjct: 181 TYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKARELAMK- 239
Query: 327 FSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
F V A ++ + KE R +EA +L+
Sbjct: 240 FEPVVPVYNA----LIHGVCKECRFKEAFDLM 267
>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 546
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 177/361 (49%), Gaps = 33/361 (9%)
Query: 32 YKENNLKRL-VDKFKKSSDLGRFRTNTG---IYTGTVQRLANAKRFRWIEEILEHQKQYK 87
Y +N RL + FK++SD G + T + +G V+ + EI + + YK
Sbjct: 103 YAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVK----------VGEIGDMEFVYK 152
Query: 88 DISKEGFTARLIAL------YGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNS 140
++ + LI+ K A + ++M R V+++N L+ G C
Sbjct: 153 EMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMG 212
Query: 141 K--KFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL 198
K K + D + K++ GI P+ V++N +I F ++ +A + EM ++G++ ++
Sbjct: 213 KIGKMYKADAILKEMRAD-GICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNV 271
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
+T+N+L+ G +NG+ +A + + MVN ++PN+ ++NA L+G K K+A EL +
Sbjct: 272 VTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDD 331
Query: 259 MRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGD 315
M + I P+V T+ LI + + N+E+A Y G + + + L+ +C KGD
Sbjct: 332 MPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGD 391
Query: 316 LDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKTNSYCRYNLKFPS 375
L+ A NL ++ D +++D L + +++A L++ CR LK PS
Sbjct: 392 LEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLD-----EMCRKGLK-PS 445
Query: 376 E 376
+
Sbjct: 446 Q 446
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 113/220 (51%), Gaps = 4/220 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+ + K M + A ++FD+MP + V ++N L+ A + ++ L++ + K
Sbjct: 312 LLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGK- 370
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ PD+ +YN +I KG L++A L+ EM+ K ++ DLIT+N L+ + G A
Sbjct: 371 GVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKA 430
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ + M ++P+ +YN +DG E + AL L +M +V T+ LIKG
Sbjct: 431 LRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKG 490
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKG 314
F + LE+A N + G N+ ++++ + EKG
Sbjct: 491 FCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKG 530
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 131/264 (49%), Gaps = 4/264 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K A KVF EM + + V+++N+L+ N+ K +E L + +
Sbjct: 242 LIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSC 301
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
++P+++++N ++ F + A L +M K+GI ++ T+N L+ + + DA
Sbjct: 302 -LKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDA 360
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ M+ V P+V +YN + GL + + A LV EM +K + D+ T+ LI
Sbjct: 361 FALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDS 420
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
N+G +++A R + + G ++ + ++ C++G+L A NL + L +
Sbjct: 421 LCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLAN 480
Query: 335 QAPLQLVVDRLAKELRVEEAKELV 358
A +++ K+ ++E+A L+
Sbjct: 481 VATYNVLIKGFCKKDKLEDANGLL 504
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 1/111 (0%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
+ A ++ DEM + + + L++N ++ L + K+G ++ +YN
Sbjct: 427 MKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQM-EKVGRLANVATYN 485
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAE 218
+IK F K L+ AN LL EM +KG+ + +T+ + G D E
Sbjct: 486 VLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKGFVPDIE 536
>gi|242062032|ref|XP_002452305.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
gi|241932136|gb|EES05281.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
Length = 347
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 136/272 (50%), Gaps = 6/272 (2%)
Query: 105 AAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLV 164
A +E+A K+ +EM + C V++FN L+ + + + +P K G P+ +
Sbjct: 64 AERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIP-KYGCTPNSL 122
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
SYN ++ AF + +D A + M +G D++++NTLL NG A + +
Sbjct: 123 SYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQL 182
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
P + SYN +DGL +TK+ALEL+ EM SK + PD+ T+ + G E +
Sbjct: 183 KGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDKI 242
Query: 285 EEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLV 341
EEA R + K G ++ ++ +C++ + A +L S C+ +++ ++
Sbjct: 243 EEAIRTFCKVQDMGIRPTVVLYNAILLGLCKRRETHNAIDLFSYMISNGCMPNESTYTIL 302
Query: 342 VDRLAKELRVEEAKELVELGKTNSYCRYNLKF 373
V+ LA E V+EA++L LG+ S N KF
Sbjct: 303 VEGLAYEGLVKEARDL--LGQLCSRGVVNKKF 332
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 148/307 (48%), Gaps = 11/307 (3%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
V+ GI +E + ++ + G NT Y ++ L A+R+ E+++E + +
Sbjct: 22 VLNGICQEGRVDDAMEFLENLPSYGG-EPNTVSYNIVLKGLFTAERWEDAEKLME-EMAH 79
Query: 87 KDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
K T LI+ + + E A +V +++P C LS+N LL A KK D+
Sbjct: 80 KGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDK 139
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
F +L G PD+VSYNT++ A G +D A LL++++ KG LI++NT++
Sbjct: 140 AMA-FVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKGKGCSPVLISYNTVI 198
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEIN 265
G G+ +A ++ + M++ ++P++ +Y GL E + ++A+ +++ I
Sbjct: 199 DGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDKIEEAIRTFCKVQDMGIR 258
Query: 266 PDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDL----DF 318
P V + A++ G A ++ +GC N++ + +LV + +G + D
Sbjct: 259 PTVVLYNAILLGLCKRRETHNAIDLFSYMISNGCMPNESTYTILVEGLAYEGLVKEARDL 318
Query: 319 AFNLCKR 325
LC R
Sbjct: 319 LGQLCSR 325
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 105/245 (42%), Gaps = 4/245 (1%)
Query: 113 KVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKA 172
K+ DEM + C ++++N +L + D+ ++LP G EP+ VSYN ++K
Sbjct: 2 KLLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLP-SYGGEPNTVSYNIVLKG 60
Query: 173 FVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPN 232
+ A L+ EM KG +++TFN L+ G A ++ E + PN
Sbjct: 61 LFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPN 120
Query: 233 VRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN 292
SYN L +K+ KA+ V M S+ PD+ ++ L+ G ++ A +
Sbjct: 121 SLSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLH 180
Query: 293 K---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKEL 349
+ GC + ++ + + G A L S+ D + L +E
Sbjct: 181 QLKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCRED 240
Query: 350 RVEEA 354
++EEA
Sbjct: 241 KIEEA 245
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 98/205 (47%), Gaps = 3/205 (1%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G PD+++YN ++ +G +D A L + G + +++N +L G ++ R+ DA
Sbjct: 11 GCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGLFTAERWEDA 70
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
EK+ E M + PNV ++N + L + A+E++ ++ P+ ++ L+
Sbjct: 71 EKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSLSYNPLLHA 130
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
F + +++A + GC + + L+ +C G++D A +L + + C
Sbjct: 131 FCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKGKGCSPV 190
Query: 335 QAPLQLVVDRLAKELRVEEAKELVE 359
V+D L K + +EA EL++
Sbjct: 191 LISYNTVIDGLTKAGKTKEALELLD 215
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 79/178 (44%), Gaps = 3/178 (1%)
Query: 185 LLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLA 244
LL EM KG D+IT+N +L G GR DA + E + + PN SYN L GL
Sbjct: 3 LLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGLF 62
Query: 245 IEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKA 301
++ + A +L+ EM K P+V TF LI G +E A K GC N
Sbjct: 63 TAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSL 122
Query: 302 IFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ L+ C++ +D A + S C D ++ L + V+ A +L+
Sbjct: 123 SYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLH 180
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 69/145 (47%), Gaps = 3/145 (2%)
Query: 219 KIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGF 278
K+ + M + P++ +YN L+G+ E + A+E + + S P+ ++ ++KG
Sbjct: 2 KLLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGL 61
Query: 279 VNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQ 335
E+A++ + GC N F +L+ F+C +G ++ A + ++ C +
Sbjct: 62 FTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNS 121
Query: 336 APLQLVVDRLAKELRVEEAKELVEL 360
++ K+ ++++A VEL
Sbjct: 122 LSYNPLLHAFCKQKKMDKAMAFVEL 146
>gi|225435096|ref|XP_002281474.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
mitochondrial-like [Vitis vinifera]
Length = 501
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 141/312 (45%), Gaps = 40/312 (12%)
Query: 44 FKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYG 103
F + +G F+ + Y+ V +LA ++ F +E +L++ + +E LI YG
Sbjct: 110 FNQYQQMG-FKHDYPSYSALVYKLARSRNFEAVETLLDYLQNINIRCRETLFIALIQHYG 168
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K+ M E A ++F MP NC +T++SFN LL V + +F + G+F D K+G +
Sbjct: 169 KSQMPEKAVELFQRMPSFNCHRTLVSFNTLLNVLVENDRFLDAIGIF-DRSTKMGFRRNS 227
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
+S+N IIK ++ KG D A + EM K ++ ++TFN+L+ G A + E
Sbjct: 228 ISFNIIIKGWLGKGEWDKAWQVFEEMIDKEVKPTVVTFNSLIGFLCGKGDLDGAMGLLED 287
Query: 224 MVNMNVRPNVRSYNARLDGLAI---EKQTKKAL--------------------------- 253
M+ RPN +Y ++GL K+ KK +
Sbjct: 288 MIQKRHRPNAVTYALLMEGLCSLGKYKEAKKMMFDMDYQGCKPRLLNFGVLMSDLGRRGR 347
Query: 254 -----ELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW---YNKSGCGMNKAIFKL 305
L+ EM+ + PDV T+ LI EG EA + GC N A +++
Sbjct: 348 IDDSKTLLLEMKRRRFKPDVVTYNILINHLCKEGRALEAYKVLVEMQVGGCEPNAATYRM 407
Query: 306 LVPFVCEKGDLD 317
+V C+ D +
Sbjct: 408 MVDGFCQVEDFE 419
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 92/214 (42%), Gaps = 34/214 (15%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHK----------- 156
++ A +VF+EM + + TV++FN+L+G D GL +D+ K
Sbjct: 243 WDKAWQVFEEMIDKEVKPTVVTFNSLIGFLCGKGDLDGAMGLLEDMIQKRHRPNAVTYAL 302
Query: 157 -----------------------LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKG 193
G +P L+++ ++ +G +D + TLL EM+++
Sbjct: 303 LMEGLCSLGKYKEAKKMMFDMDYQGCKPRLLNFGVLMSDLGRRGRIDDSKTLLLEMKRRR 362
Query: 194 IRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKAL 253
+ D++T+N L+ GR +A K+ M PN +Y +DG + + L
Sbjct: 363 FKPDVVTYNILINHLCKEGRALEAYKVLVEMQVGGCEPNAATYRMMVDGFCQVEDFEGGL 422
Query: 254 ELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+++ M P + +F L+ G + G ++ A
Sbjct: 423 KVLSAMLMCGHCPRLESFCDLVVGLLKNGKIDGA 456
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 77/169 (45%), Gaps = 1/169 (0%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
++ A+K+ +M + C+ +L+F L+ + D+ L ++ + +PD+V+YN
Sbjct: 313 YKEAKKMMFDMDYQGCKPRLLNFGVLMSDLGRRGRIDDSKTLLLEMKRR-RFKPDVVTYN 371
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
+I +G A +L EM+ G + T+ ++ GF F K+ M+
Sbjct: 372 ILINHLCKEGRALEAYKVLVEMQVGGCEPNAATYRMMVDGFCQVEDFEGGLKVLSAMLMC 431
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
P + S+ + GL + A ++ EM +++ + + AL+K
Sbjct: 432 GHCPRLESFCDLVVGLLKNGKIDGACFVLEEMEKRKMRFHLEAWEALVK 480
>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
gi|194702156|gb|ACF85162.1| unknown [Zea mays]
gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
Length = 567
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 131/256 (51%), Gaps = 4/256 (1%)
Query: 105 AAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLV 164
A +E+A K+ +EM + C V++FN L+ + + + +P + G P+ +
Sbjct: 284 AERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMP-QYGCTPNSL 342
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
SYN ++ AF + + A + M +G D++++NTLL NG A ++ +
Sbjct: 343 SYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQL 402
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
+ P + SYN +DGL +TK+ALEL+ EM SK + PD+ T+ + G E +
Sbjct: 403 KDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRI 462
Query: 285 EEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLV 341
EEA R + K G A++ ++ +C++ + A +L S C+ +++ ++
Sbjct: 463 EEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTIL 522
Query: 342 VDRLAKELRVEEAKEL 357
V+ LA E V+EA+EL
Sbjct: 523 VEGLAYEGLVKEAREL 538
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 134/302 (44%), Gaps = 37/302 (12%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
V+ GI +E ++ ++ K G NT Y ++ L A+R+ E+++E + +
Sbjct: 242 VLNGICQEGRVEDAMEFLKNLPSYG-CEPNTVSYNIVLKGLFTAERWEDAEKLME-EMAH 299
Query: 87 KDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
K T LI+ + + E A +V ++MP C LS+N LL A KK +
Sbjct: 300 KGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHK 359
Query: 146 V---------DGLFKD----------------------LPHKL---GIEPDLVSYNTIIK 171
G + D L H+L G P L+SYNT+I
Sbjct: 360 AMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVID 419
Query: 172 AFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRP 231
G A LL EM KG++ D+IT++T+ G R +A + + + +M +RP
Sbjct: 420 GLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRP 479
Query: 232 NVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY 291
YNA L GL ++T A++L M S P+ T+ L++G EG ++EA+ +
Sbjct: 480 TAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELF 539
Query: 292 NK 293
+
Sbjct: 540 AQ 541
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 115/237 (48%), Gaps = 7/237 (2%)
Query: 127 VLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLL 186
V+ +NA++ + + D L D+P +EPD +YNT+I+ +G +A +L
Sbjct: 134 VMVYNAMVAGYCGAGQLDAARRLVADMP----VEPDAYTYNTLIRGLCGRGRTSNALAVL 189
Query: 187 YEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIE 246
+M ++G D++T+ LL + A K+ + M + P++ +YN L+G+ E
Sbjct: 190 EDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQE 249
Query: 247 KQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIF 303
+ + A+E + + S P+ ++ ++KG E+A++ + GC N F
Sbjct: 250 GRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTF 309
Query: 304 KLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVEL 360
+L+ F+C +G ++ A + ++ C + ++ K+ ++ +A E VEL
Sbjct: 310 NMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVEL 366
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 116/265 (43%), Gaps = 7/265 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
++A Y A + AR++ +MP E ++N L+ + + +D+ +
Sbjct: 140 MVAGYCGAGQLDAARRLVADMP---VEPDAYTYNTLIRGLCGRGRTSNALAVLEDM-FRR 195
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G PD+V+Y +++A + A LL EM KG D++T+N +L G GR DA
Sbjct: 196 GCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDA 255
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ + + + PN SYN L GL ++ + A +L+ EM K P+V TF LI
Sbjct: 256 MEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISF 315
Query: 278 FVNEGNLEEAKRWYNKS---GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
G +E A + GC N + L+ C++ + A + S C D
Sbjct: 316 LCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPD 375
Query: 335 QAPLQLVVDRLAKELRVEEAKELVE 359
++ L + V+ A EL+
Sbjct: 376 IVSYNTLLTALCRNGEVDVAIELLH 400
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 89/187 (47%), Gaps = 4/187 (2%)
Query: 78 EILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGAC 137
E++ + Y DI + L AL + + A ++ ++ + C ++S+N ++
Sbjct: 365 ELMVSRGCYPDIVS--YNTLLTALC-RNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGL 421
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLD 197
+ K E L ++ K G++PD+++Y+TI + ++ A +++ GIR
Sbjct: 422 TKAGKTKEALELLDEMTSK-GLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPT 480
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
+N +LLG +A ++ M++ PN +Y ++GLA E K+A EL
Sbjct: 481 AALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFA 540
Query: 258 EMRSKEI 264
++ S+ +
Sbjct: 541 QLCSRGV 547
>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 151/345 (43%), Gaps = 13/345 (3%)
Query: 24 IGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQ 83
+ +++ G+ K+ N+ D K G + +Y + + + E + +
Sbjct: 323 VSNLVDGLRKKGNIGSAFDLVNKVKKFG-VAPSLFVYNALINSMCKDGKLDEAESLFNNM 381
Query: 84 KQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKF 143
+ + LI + K + A +M + TV +++L+ K
Sbjct: 382 GHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKL 441
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT 203
LF ++ G++P++V Y ++I + +G L +A L +EM KGI + TF
Sbjct: 442 RAAKSLFDEMIAN-GLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTA 500
Query: 204 LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
L+ G R A+A K++ MV NV PN +YN ++G E T +A EL+ EM K
Sbjct: 501 LISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKG 560
Query: 264 INPDVFTFYALIKGFVNEGNLEEAKRWYNK-----------SGCGMNKAIFKLLVPFVCE 312
+ PD +T+ LI G + G + EA+ + N GC N + L+ +C+
Sbjct: 561 LVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCK 620
Query: 313 KGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
G +D A LC+ + L +Q +D L E +E+A +L
Sbjct: 621 IGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQL 665
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 155/334 (46%), Gaps = 5/334 (1%)
Query: 28 IRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYK 87
IRG+ K + V+ K R + G Y V L + F EE++ ++
Sbjct: 257 IRGLCKNQRVWEAVE-IKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFG 315
Query: 88 DISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVD 147
+ E + L+ K +A + +++ ++ +NAL+ + K DE +
Sbjct: 316 FVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAE 375
Query: 148 GLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLG 207
LF ++ HK G+ P+ V+Y+ +I +F +G LD A L +M + GI+ + +++L+ G
Sbjct: 376 SLFNNMGHK-GLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISG 434
Query: 208 FYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPD 267
G+ A+ +++ M+ ++PNV Y + + G E + A L EM K I+P+
Sbjct: 435 HCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPN 494
Query: 268 VFTFYALIKGFVNEGNLEEAKRWYNKS---GCGMNKAIFKLLVPFVCEKGDLDFAFNLCK 324
+TF ALI G + + EA + + + N+ + +L+ C++G+ AF L
Sbjct: 495 TYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLD 554
Query: 325 RTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
+ + D + ++ L RV EA+E +
Sbjct: 555 EMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFM 588
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 64/120 (53%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G + V+YN +I+ F G + A +L M GI D I+++T++ + G +A
Sbjct: 672 GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEA 731
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
K+WE+M+N V P+ +YN + G + + KA EL +M + + P+ T+ +LI G
Sbjct: 732 IKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHG 791
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 97/217 (44%), Gaps = 4/217 (1%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
F A +FDE+ V + A++ + K F + + G + + +YN
Sbjct: 196 FRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESS-GCDLSVATYN 254
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
I+ + A + + KG+R D+ T+ TL+LG F E++ M+
Sbjct: 255 VFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEF 314
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
P+ + + +DGL + A +LV +++ + P +F + ALI +G L+EA
Sbjct: 315 GFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEA 374
Query: 288 KRWYNKSGC-GM--NKAIFKLLVPFVCEKGDLDFAFN 321
+ +N G G+ N + +L+ C++G LD A +
Sbjct: 375 ESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALH 411
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 126/330 (38%), Gaps = 45/330 (13%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
S+I G KE L + + + G NT +T + L +A R ++ +
Sbjct: 465 SLISGYCKEGELHNAFRLYHEMTGKG-ISPNTYTFTALISGLCHANRMAEANKLFGEMVE 523
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
+ I E LI + K A ++ DEM + ++ L+ ++ + E
Sbjct: 524 WNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSE 583
Query: 146 VDGLFKDLP---HKL----GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEME-------- 190
DL KL G P++V+Y +I G +D A L EM
Sbjct: 584 AREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQ 643
Query: 191 ----------------KKGIRL----------DLITFNTLLLGFYSNGRFADAEKIWETM 224
+K I+L + +T+N L+ GF GR +A ++ M
Sbjct: 644 NTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNM 703
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
++ + P+ SY+ + K+A++L M ++ +NPD + LI G G L
Sbjct: 704 IDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGEL 763
Query: 285 EEAKRWYN---KSGCGMNKAIFKLLVPFVC 311
+A + + G N+A + L+ C
Sbjct: 764 TKAFELRDDMMRRGVKPNRATYNSLIHGTC 793
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
GI PD +SY+TII + +G L A L M +G+ D + +N L+ G G A
Sbjct: 707 GISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKA 766
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAI 245
++ + M+ V+PN +YN+ + G +
Sbjct: 767 FELRDDMMRRGVKPNRATYNSLIHGTCL 794
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 58/117 (49%), Gaps = 3/117 (2%)
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
+ F+ L+ + N R D + M++ + P +R+ + L+GL +Q + AL L E
Sbjct: 146 LGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDE 205
Query: 259 MRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCE 312
+ S + PDV+ + A+++ + A+ + SGC ++ A + + + +C+
Sbjct: 206 IVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCK 262
>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 864
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 161/350 (46%), Gaps = 14/350 (4%)
Query: 22 KFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILE 81
+ S++ G + NL+ + F S G N+ Y+ + L R +EE
Sbjct: 231 HIVTSLLLGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGR---LEEAFG 287
Query: 82 HQKQYKD----ISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGAC 137
+ Q + S +T + AL + + + A +FDEM R C+ V ++ L+
Sbjct: 288 LKDQMGEKGCQPSTRTYTVLIKALCDRG-LIDKAFNLFDEMIARGCKPNVHTYTVLIDGL 346
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLD 197
K +E +G+ + + K GI P +++YN +I + G + A LL MEK+ + +
Sbjct: 347 CRDGKIEEANGVCRKMV-KDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPN 405
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
+ TFN L+ G G+ A + + M++ + P++ SYN +DGL E A +L+
Sbjct: 406 VRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLT 465
Query: 258 EMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKG 314
M S ++ PD TF A+I F +G + A + + G +++ L+ VC G
Sbjct: 466 SMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVG 525
Query: 315 DLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKTN 364
A + + R L L +++D L+K +++E EL LGK N
Sbjct: 526 KTRDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKE--ELAMLGKIN 573
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 117/259 (45%), Gaps = 37/259 (14%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEV---------- 146
LI Y K A ++ M R C+ V +FN L+ G C K + V
Sbjct: 377 LINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNG 436
Query: 147 ------------DGLFKD----LPHKL-------GIEPDLVSYNTIIKAFVDKGSLDSAN 183
DGL ++ + +KL +EPD +++ II AF +G D A+
Sbjct: 437 LSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVAS 496
Query: 184 TLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
L M +KGI LD +T TL+ G + G+ DA I ET+V M + S N LD L
Sbjct: 497 AFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVILDML 556
Query: 244 AIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW---YNKSGCGMNK 300
+ + K+ L ++G++ + P V T+ L+ G + G++ + R SGC N
Sbjct: 557 SKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNV 616
Query: 301 AIFKLLVPFVCEKGDLDFA 319
+ +++ +C+ G ++ A
Sbjct: 617 YPYTIIINGLCQFGRVEEA 635
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 100/219 (45%), Gaps = 5/219 (2%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G ++ Y TI+ A G ++A + ++ K G LD +LLLGF DA
Sbjct: 190 GFVVGMIDYRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDA 249
Query: 218 EKIWETMVNM-NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
K+++ M PN SY+ + GL + ++A L +M K P T+ LIK
Sbjct: 250 LKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIK 309
Query: 277 GFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV 333
+ G +++A +++ GC N + +L+ +C G ++ A +C++ +
Sbjct: 310 ALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFP 369
Query: 334 DQAPLQLVVDRLAKELRVEEAKELVELGKTNSYCRYNLK 372
+++ K+ RV A EL+ + + + C+ N++
Sbjct: 370 SVITYNALINGYCKDGRVVPAFELLTVMEKRA-CKPNVR 407
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 65/127 (51%), Gaps = 4/127 (3%)
Query: 155 HKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRF 214
+KLG+ P +V+Y T++ + G + + +L M+ G ++ + ++ G GR
Sbjct: 573 NKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRV 632
Query: 215 ADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM--RSKEINPDVFTFY 272
+AEK+ M + V PN +Y + G + +ALE V M R E+N +++
Sbjct: 633 EEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYS-- 690
Query: 273 ALIKGFV 279
+L++GFV
Sbjct: 691 SLLRGFV 697
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 102/217 (47%), Gaps = 23/217 (10%)
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
PH L + D++S +K + +L ++ K G+ ++T+ TL+ G +G
Sbjct: 546 PHSLNVILDMLSKGCKLKEEL---------AMLGKINKLGLVPSVVTYTTLVDGLIRSGD 596
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
+ + ++ E M PNV Y ++GL + ++A +L+ M+ ++P+ T+
Sbjct: 597 ISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTV 656
Query: 274 LIKGFVNEGNLE---EAKRWYNKSGCGMNKAIF-KLLVPFV-CEKGDLDFAFNLCKRTFS 328
++KG+VN G L+ E R + G +N I+ LL FV +KG + K S
Sbjct: 657 MVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGFVLSQKGIRETDPECIKELIS 716
Query: 329 ERCLVDQ------APLQLVVDRLAKELRVEEAKELVE 359
+V+Q +V RL KE R +E+ LV+
Sbjct: 717 ---VVEQLGGSTSGLCIFLVTRLCKEGRTDESNGLVQ 750
>gi|115447457|ref|NP_001047508.1| Os02g0633200 [Oryza sativa Japonica Group]
gi|49388176|dbj|BAD25302.1| membrane-associated salt-inducible protein like [Oryza sativa
Japonica Group]
gi|113537039|dbj|BAF09422.1| Os02g0633200 [Oryza sativa Japonica Group]
gi|125540409|gb|EAY86804.1| hypothetical protein OsI_08180 [Oryza sativa Indica Group]
gi|125582977|gb|EAZ23908.1| hypothetical protein OsJ_07630 [Oryza sativa Japonica Group]
gi|215693356|dbj|BAG88738.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 455
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 126/267 (47%), Gaps = 4/267 (1%)
Query: 96 ARLIALYGKAAMFENARKVF-DEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLP 154
A ++ Y A++ E A F P + L FNA+L + ++ V LF +L
Sbjct: 108 AAVLCSYAAASLPEKALAAFRSAAPSLPSPISPLPFNAVLSVFLRCRRHRRVPVLFDELS 167
Query: 155 HKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRF 214
+ I PD SY ++KA+ A+ +L +M +G + T++ Y +
Sbjct: 168 KEFSITPDASSYGILVKAYCMLSKDAKAHEVLDQMRGQGFTPTNSIYTTMIDSMYKQKKM 227
Query: 215 ADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYAL 274
AE++W+ M+ +P+ YN ++ ++ +T+ LE++ EM + PD T+ L
Sbjct: 228 EQAERLWKQMLESGRKPDQAVYNTKIMHHSLHGKTEDVLEVIAEMEEAGVKPDTITYNFL 287
Query: 275 IKGFVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERC 331
+ + G +E AK Y + GC N A +K ++ +C GDLD A + K ++
Sbjct: 288 MTSYCKHGKMETAKELYRSLGEKGCSANAATYKHMMAQLCAHGDLDGALVIFKESYRSNK 347
Query: 332 LVDQAPLQLVVDRLAKELRVEEAKELV 358
+ D + +V+ L K RV EAK +V
Sbjct: 348 VPDFRTMSGLVEGLTKAGRVAEAKNIV 374
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 85/171 (49%), Gaps = 6/171 (3%)
Query: 94 FTARLIALYGKAAMFENARKVFDEM--PGRNCEQTVLSFNALLGACVNSKKFDEVDGLFK 151
+T + ++Y + M E A +++ +M GR +Q V +N + K ++V +
Sbjct: 214 YTTMIDSMYKQKKM-EQAERLWKQMLESGRKPDQAV--YNTKIMHHSLHGKTEDVLEVIA 270
Query: 152 DLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSN 211
++ + G++PD ++YN ++ ++ G +++A L + +KG + T+ ++ ++
Sbjct: 271 EM-EEAGVKPDTITYNFLMTSYCKHGKMETAKELYRSLGEKGCSANAATYKHMMAQLCAH 329
Query: 212 GRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
G A I++ N P+ R+ + ++GL + +A +V +M+ K
Sbjct: 330 GDLDGALVIFKESYRSNKVPDFRTMSGLVEGLTKAGRVAEAKNIVAKMKKK 380
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 127/257 (49%), Gaps = 4/257 (1%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
KA E ARKVFDEM V+S+N LL E +F ++ + G+ PD+
Sbjct: 235 KAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQR-GLVPDV 293
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
V++ ++I A G+L+ A L+ +M ++G+R++ +TF L+ GF G DA E
Sbjct: 294 VTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEE 353
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M ++P+V YNA ++G + A EL+ EM +K + PDV T+ +I G+ GN
Sbjct: 354 MRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGN 413
Query: 284 LEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL 340
L+ A + K G + + L+ +CE+ L+ A L + D+
Sbjct: 414 LDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTT 473
Query: 341 VVDRLAKELRVEEAKEL 357
++D KE VE+A L
Sbjct: 474 LIDGHCKEGNVEKALSL 490
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 105/196 (53%), Gaps = 2/196 (1%)
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
FTA LI + K ++A +EM + +V+ +NAL+ + D L +++
Sbjct: 331 FTA-LIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREM 389
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
K ++PD+V+Y+TII + G+LDSA L +M KKG+ D IT+++L+ G R
Sbjct: 390 EAK-RVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKR 448
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
DA +++E M+ + V+P+ +Y +DG E +KAL L EM K + PDV T+
Sbjct: 449 LNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSV 508
Query: 274 LIKGFVNEGNLEEAKR 289
LI G +EA R
Sbjct: 509 LINGLSKSARTKEAHR 524
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 138/294 (46%), Gaps = 9/294 (3%)
Query: 67 LANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQT 126
L +A+RF + +L H ++ R + G+ E A V +M G C
Sbjct: 133 LPSARRF--LSSMLRHGVA-PNVYTYNILVRALCARGR---LEEAVGVVGDMRGAGCAPN 186
Query: 127 VLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLL 186
+++N L+ A + + D + + + + +P+LV++N+++ G ++ A +
Sbjct: 187 AVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVF 246
Query: 187 YEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIE 246
EM ++G+ D++++NTLL G+ G ++ ++ M + P+V ++ + +
Sbjct: 247 DEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKA 306
Query: 247 KQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK-SGCGMNKAI--F 303
++A+ LV +MR + + + TF ALI GF +G L++A + CG+ ++ +
Sbjct: 307 GNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCY 366
Query: 304 KLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
L+ C+ G +D A L + ++R D ++ K ++ A +L
Sbjct: 367 NALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQL 420
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 100/234 (42%), Gaps = 41/234 (17%)
Query: 126 TVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTL 185
+V ++NA+L A ++ L L H G+ P++ +YN +++A +G L+ A +
Sbjct: 117 SVPAYNAVLLALSDASLPSARRFLSSMLRH--GVAPNVYTYNILVRALCARGRLEEAVGV 174
Query: 186 LYEMEKKGIRLDLITFNTLLL------------------------------------GFY 209
+ +M G + +T+NTL+ G
Sbjct: 175 VGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLC 234
Query: 210 SNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVF 269
GR A K+++ MV + P+V SYN L G ++L + EM + + PDV
Sbjct: 235 KAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVV 294
Query: 270 TFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAF 320
TF +LI GNLE+A + G MN+ F L+ C+KG LD A
Sbjct: 295 TFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDAL 348
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 117/248 (47%), Gaps = 19/248 (7%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI Y K + AR++ EM + + V++++ ++ D L + + K
Sbjct: 369 LINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKK- 427
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ PD ++Y+++I+ ++ L+ A L M + G++ D T+ TL+ G G A
Sbjct: 428 GVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKA 487
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTF------ 271
+ + M+ V P+V +Y+ ++GL+ +TK+A L+ ++ ++ PD +
Sbjct: 488 LSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLC 547
Query: 272 ---------YALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFA 319
AL+KGF +G ++EA + Y ++ +++ +L+ C G++ A
Sbjct: 548 CSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKA 607
Query: 320 FNLCKRTF 327
+ K+
Sbjct: 608 LSFHKQML 615
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 9/142 (6%)
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
+N +LL S+ A + +M+ V PNV +YN + L + ++A+ +VG+M
Sbjct: 120 AYNAVLLAL-SDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDM 178
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN----KSGCGMNKAIFKLLVPFVCEKGD 315
R P+ T+ L+ F G L+ A+R + + N F +V +C+ G
Sbjct: 179 RGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGR 238
Query: 316 LDFAFNLCKRTFSERCLVDQAP 337
++ A ++ F E AP
Sbjct: 239 MEGA----RKVFDEMVREGLAP 256
>gi|115440435|ref|NP_001044497.1| Os01g0793200 [Oryza sativa Japonica Group]
gi|113534028|dbj|BAF06411.1| Os01g0793200, partial [Oryza sativa Japonica Group]
Length = 235
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 114/213 (53%), Gaps = 3/213 (1%)
Query: 150 FKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFY 209
F+ P ++P+ ++N IIK+F + G+ S ++L EM +KG++ + TF T + GFY
Sbjct: 1 FQTFPDAYSVKPNTDTFNAIIKSFAESGTTRSFYSVLDEMCQKGVKPNATTFTTAIAGFY 60
Query: 210 SNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVF 269
RF D K+ E M ++ +N R+ GL ++ A L+ EM K P
Sbjct: 61 KEERFDDVGKVIELMKKHGCGESLPVFNVRVQGLCKLGRSGDAKALLNEMVKKGTKPSWL 120
Query: 270 TFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRT 326
T+ LI GF EG+LEEAKR Y K G + + + +L+ ++C+ GD D A +
Sbjct: 121 TYNHLIHGFCKEGDLEEAKRLYKEMAKKGLVGDSSFYYMLIYYLCKGGDFDTAVGVYNEI 180
Query: 327 FSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ + + ++++V+ LA RV+EAK ++E
Sbjct: 181 AARNWVPCFSTMKMLVNGLAGSSRVDEAKGIIE 213
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 93/221 (42%), Gaps = 5/221 (2%)
Query: 44 FKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEH--QKQYKDISKEGFTARLIAL 101
F+ D + NT + ++ A + R +L+ QK K + FT +
Sbjct: 1 FQTFPDAYSVKPNTDTFNAIIKSFAESGTTRSFYSVLDEMCQKGVKP-NATTFTTAIAGF 59
Query: 102 YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEP 161
Y K F++ KV + M C +++ FN + + + L ++ K G +P
Sbjct: 60 Y-KEERFDDVGKVIELMKKHGCGESLPVFNVRVQGLCKLGRSGDAKALLNEMVKK-GTKP 117
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
++YN +I F +G L+ A L EM KKG+ D + L+ G F A ++
Sbjct: 118 SWLTYNHLIHGFCKEGDLEEAKRLYKEMAKKGLVGDSSFYYMLIYYLCKGGDFDTAVGVY 177
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
+ N P + ++GLA + +A ++ +M+ K
Sbjct: 178 NEIAARNWVPCFSTMKMLVNGLAGSSRVDEAKGIIEKMKEK 218
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 135/270 (50%), Gaps = 8/270 (2%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
F+ A++VF M + V SFN L+G + +E +K++ + G+ PD+VS++
Sbjct: 243 FDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQR-GVTPDVVSFS 301
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
+I F +G +D A L EM+ G+ D + + ++ GF G ++A ++ + MV +
Sbjct: 302 CLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGL 361
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
P+V +YN L+GL + + A EL+ EM+ + + PD+ TF LI G+ +GN E+A
Sbjct: 362 GCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKA 421
Query: 288 KRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDR 344
+ ++ + + L+ +C KGDL A L + + +++D
Sbjct: 422 LQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDS 481
Query: 345 LAKELRVEEA----KELVELGKTNSYCRYN 370
++ +VEEA E+V G + YN
Sbjct: 482 HCEKGQVEEAFGFLDEMVSKGNLPNIMTYN 511
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 130/255 (50%), Gaps = 8/255 (3%)
Query: 122 NCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDS 181
+ E + N ++ + S +FD+ D + ++ K + PD+V++N +I A G +D+
Sbjct: 152 DSEVNAYTLNIMVHSYCKSLEFDKADTVISEM-EKRCVFPDVVTHNVLIDARFRAGDVDA 210
Query: 182 ANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLD 241
A L+ M KG++ ++TFN++L G + RF A++++ M +V P+VRS+N +
Sbjct: 211 AIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIG 270
Query: 242 GLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK-SGCGM-- 298
G + ++A++ EM+ + + PDV +F LI F G ++ A + + G G+
Sbjct: 271 GFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVP 330
Query: 299 NKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
+ I+ +++ C G + A + CL D +++ L K+ R+ +A+EL+
Sbjct: 331 DGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELL 390
Query: 359 ----ELGKTNSYCRY 369
E G T C +
Sbjct: 391 NEMKERGVTPDLCTF 405
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 114/221 (51%), Gaps = 7/221 (3%)
Query: 73 FRWIEEILEHQKQYKDISKEGFTAR------LIALYGKAAMFENARKVFDEMPGRNCEQT 126
F + E+ E K YK++ + G T LI L+ ++A EM G
Sbjct: 272 FCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPD 331
Query: 127 VLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLL 186
+ + ++G + E + +D LG PD+V+YNT++ + L A LL
Sbjct: 332 GVIYTMVIGGFCRAGSMSEALRV-RDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELL 390
Query: 187 YEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIE 246
EM+++G+ DL TF TL+ G+ +G F A ++++T+++ +RP+V +YN+ +DG+ +
Sbjct: 391 NEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRK 450
Query: 247 KQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
KA EL +M ++EI P+ T+ LI +G +EEA
Sbjct: 451 GDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEA 491
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 113/236 (47%), Gaps = 1/236 (0%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMP 119
Y + L R EE+L K+ LI Y + FE A ++FD +
Sbjct: 370 YNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLL 429
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL 179
+ V+++N+L+ + + L+ D+ H I P+ V+Y+ +I + +KG +
Sbjct: 430 HQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDM-HAREIFPNHVTYSILIDSHCEKGQV 488
Query: 180 DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNAR 239
+ A L EM KG +++T+N+++ G+ +G ++ + M+ N+ P++ ++N
Sbjct: 489 EEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTL 548
Query: 240 LDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSG 295
+ G E+ A + M + + PD T+ +I GF +GN+EEA R + K G
Sbjct: 549 IHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMG 604
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 134/274 (48%), Gaps = 14/274 (5%)
Query: 26 SVIRGIYKENNL---KRLVDKFKK---SSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEI 79
+++ G+ K++ L + L+++ K+ + DL F T Y R N ++ + +
Sbjct: 372 TLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYC----RDGNFEKALQLFDT 427
Query: 80 LEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
L HQ+ D+ LI + A +++D+M R ++++ L+ +
Sbjct: 428 LLHQRLRPDVVAYN---SLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCE 484
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
+ +E G ++ K G P++++YN+IIK + G++ L +M + I DLI
Sbjct: 485 KGQVEEAFGFLDEMVSK-GNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLI 543
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
TFNTL+ G+ A ++ M V+P+ +YN ++G + + ++A + +M
Sbjct: 544 TFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKM 603
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK 293
+ I PD +T+ +LI G V GN +EA + +++
Sbjct: 604 GASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDE 637
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 89/174 (51%), Gaps = 9/174 (5%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACV--NSKKFDE-VDGLFKDL 153
LI + + E A DEM + ++++N+++ G C N KK + + + +D
Sbjct: 478 LIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQD- 536
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
I PDL+++NT+I ++ + ++ A + MEK+ ++ D +T+N ++ GF G
Sbjct: 537 ----NILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGN 592
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPD 267
+A ++++ M + P+ +Y + ++G +K+A +L EM + PD
Sbjct: 593 MEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPD 646
>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1246
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 162/383 (42%), Gaps = 46/383 (12%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
+I + K ++ R D + G F N Y + L A+R E+LE+ +
Sbjct: 381 LIEALCKSGDVDRAFDMLDVMTTKGIF-PNLHTYNTMICGLLKARRLDEALELLENMESL 439
Query: 87 KDISKEGFTARL-IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
+ F+ L I YGK+ A F+ M R ++ + NA L + + E
Sbjct: 440 -GVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISE 498
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
+ +F DL HK G+ PD V+YN ++K + G +D A LL EM KG D++ N+L+
Sbjct: 499 AEDIFNDL-HKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLI 557
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK--- 262
Y GR A K++ + N+ + P V +YN L GL E + KALEL G M
Sbjct: 558 NTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCP 617
Query: 263 --------------------------------EINPDVFTFYALIKGFVNEGNLEEAKRW 290
NPDV T+ +I G + EG ++ A +
Sbjct: 618 PNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWF 677
Query: 291 YNKSGCGMNKAIFKL--LVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL---VVDRL 345
+++ ++ L L+P V G ++ A + + CL Q Q +++ +
Sbjct: 678 FHQMKKFLSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACL--QTNSQFWGELMECI 735
Query: 346 AKELRVEEAKELVELGKTNSYCR 368
E +EEA E+ NS C+
Sbjct: 736 LTEAEIEEAISFAEILVCNSVCQ 758
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 120/289 (41%), Gaps = 37/289 (12%)
Query: 103 GKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL------PHK 156
G+A ++A +F EM C V+++ L+ A + K D+ L+ + P +
Sbjct: 281 GRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDR 340
Query: 157 L----------------------------GIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
+ G PD+V+Y +I+A G +D A +L
Sbjct: 341 VTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDV 400
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
M KGI +L T+NT++ G R +A ++ E M ++ V+P SY +D
Sbjct: 401 MTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGD 460
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKL 305
KA++ M+ + I P + A + G + EA+ +N K G + + +
Sbjct: 461 PAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNM 520
Query: 306 LVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA 354
L+ + G +D A L S+ C D + +++ L K RV+ A
Sbjct: 521 LMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAA 569
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 102/205 (49%), Gaps = 3/205 (1%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++P + +Y+ ++ A +G LL EM+ G+R ++ T+ + R DA
Sbjct: 230 GMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDA 289
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
I++ M + P+V +Y +D L + KA EL +MR+ +PD T+ L+
Sbjct: 290 WGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDK 349
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
F G+LE KR++N+ G + + +L+ +C+ GD+D AF++ ++ +
Sbjct: 350 FGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPN 409
Query: 335 QAPLQLVVDRLAKELRVEEAKELVE 359
++ L K R++EA EL+E
Sbjct: 410 LHTYNTMICGLLKARRLDEALELLE 434
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 115/257 (44%), Gaps = 4/257 (1%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
+I + K NNL + +D + + G F Y + L A R +I E Y
Sbjct: 872 IISALVKSNNLNKALDLYYELMS-GDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDY 930
Query: 87 KDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEV 146
LI +GK+ + A ++F +M + S+ L+ + + DE
Sbjct: 931 GCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEA 990
Query: 147 DGLFKDLPHKL-GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
F++L KL G++PD VSYN II LD A +L EM+ +GI DL T+N L+
Sbjct: 991 VQYFEEL--KLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALI 1048
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEIN 265
L G+ A K++E + + + P+V +YNA + G ++ +A + +M +
Sbjct: 1049 LHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCS 1108
Query: 266 PDVFTFYALIKGFVNEG 282
P+ TF L + G
Sbjct: 1109 PNTETFAQLPNKYPRAG 1125
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 122/271 (45%), Gaps = 37/271 (13%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE------------ 145
L+ +GK+ ++ EM R CE ++ N ++ A V S ++
Sbjct: 837 LLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGD 896
Query: 146 -----------VDGLFK----DLPHKL-------GIEPDLVSYNTIIKAFVDKGSLDSAN 183
+DGL K + K+ G P+ V YN +I F G +D A
Sbjct: 897 FSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFAC 956
Query: 184 TLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
L +M K+GIR DL ++ L+ GR +A + +E + + P+ SYN ++GL
Sbjct: 957 ELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGL 1016
Query: 244 AIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK-SGCGMNKAI 302
++ +AL L EM+++ I+PD++T+ ALI G ++ A + Y + G+ ++
Sbjct: 1017 GKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSV 1076
Query: 303 FKL--LVPFVCEKGDLDFAFNLCKRTFSERC 331
F L+ G+ D AF++ K+ C
Sbjct: 1077 FTYNALIRGHSLSGNKDQAFSVFKKMMVVGC 1107
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 99/222 (44%), Gaps = 3/222 (1%)
Query: 141 KKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLIT 200
KK + +F LGI P L SYN ++ + + A L +M+ G + T
Sbjct: 774 KKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFT 833
Query: 201 FNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMR 260
+N LL + R ++ M + PN ++N + L KAL+L E+
Sbjct: 834 YNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELM 893
Query: 261 SKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS---GCGMNKAIFKLLVPFVCEKGDLD 317
S + +P T+ LI G + G E+A + + + GCG N I+ +L+ + G++D
Sbjct: 894 SGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEID 953
Query: 318 FAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
FA L K+ E D ++V+ L R++EA + E
Sbjct: 954 FACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFE 995
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 91/183 (49%), Gaps = 1/183 (0%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
E A ++F++M ++N LL A SK+ +++ L+ ++ + G EP+ +++N
Sbjct: 813 EKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSR-GCEPNAITHNI 871
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
II A V +L+ A L YE+ T+ L+ G GR A KI+E M++
Sbjct: 872 IISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYG 931
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
PN YN ++G + A EL +M + I PD+ ++ L++ G ++EA
Sbjct: 932 CGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAV 991
Query: 289 RWY 291
+++
Sbjct: 992 QYF 994
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 95/206 (46%), Gaps = 33/206 (16%)
Query: 152 DLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSN 211
DL K I +L +Y TI KA KG + A L +M + G L+ ++N L+
Sbjct: 155 DLMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFALRKMTEVGFILNAYSYNGLI-HLLLP 213
Query: 212 GRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTF 271
G +A K+++ M++ ++P++++Y+A + L T+K + L+ EM+S + P+++T+
Sbjct: 214 GFCNEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTY 273
Query: 272 YALIKGFVNEGNLEEAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERC 331
I+ L A+R +D A+ + K E C
Sbjct: 274 TICIRA------LGRARR--------------------------IDDAWGIFKEMDDEGC 301
Query: 332 LVDQAPLQLVVDRLAKELRVEEAKEL 357
D +++D L ++++AKEL
Sbjct: 302 GPDVITYTVLIDALCAAGKLDKAKEL 327
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 153/325 (47%), Gaps = 46/325 (14%)
Query: 73 FRWIEEILEHQKQYKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFN 131
++ E++L++ IS +G LI Y K + A ++++EM E ++ ++N
Sbjct: 28 YKLFEQMLDNG-----ISPDGIEYNILIDGYAKKGRVDEANRLYEEMVSVGLEPSIYTYN 82
Query: 132 ALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLD----------- 180
+LL A K E LFK + K G EPD+V+Y+TII G +
Sbjct: 83 SLLNAFCKETKMKEAMELFKTMAEK-GFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMI 141
Query: 181 ----SANTLLY---------------------EMEKKGIRLDLITFNTLLLGFYSNGRFA 215
SANT+ Y EM KG D IT+NT+L G G+ +
Sbjct: 142 ERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVS 201
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
+A++ +++M + P+V +YN LD L E +T +A++L ++ +K PD T+ +++
Sbjct: 202 EAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSIL 261
Query: 276 KGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCL 332
G + N++EA+ + K SGC N A + +++ C +D A + + +
Sbjct: 262 LGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAV 321
Query: 333 VDQAPLQLVVDRLAKELRVEEAKEL 357
D +++D L K V++A EL
Sbjct: 322 PDVVTYNILLDGLCKTNLVDKAHEL 346
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 157/353 (44%), Gaps = 10/353 (2%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
S++ KE +K ++ FK ++ G F + Y+ + L + E+L H+
Sbjct: 83 SLLNAFCKETKMKEAMELFKTMAEKG-FEPDVVTYSTIISGLCKTGKVTEALEMLFHKMI 141
Query: 86 YKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
+ S LI K E A K+ +EM + +++N +L K
Sbjct: 142 ERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVS 201
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
E F +P + G PD+V+YN ++ A +G D A L ++ KG D +T+N++
Sbjct: 202 EAKQFFDSMPSR-GYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSI 260
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
LLG +AE++++ MV PN +Y+ L G K+ A +++ EM
Sbjct: 261 LLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGA 320
Query: 265 NPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFN 321
PDV T+ L+ G +++A ++ +GC + + +++ +C+ + A
Sbjct: 321 VPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARV 380
Query: 322 LCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVEL----GKTNSYCRYN 370
L R + + D +++D L K +++EAK+L++ G Y YN
Sbjct: 381 LFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYN 433
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 139/276 (50%), Gaps = 6/276 (2%)
Query: 87 KDISKEGFTARLI-ALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
++ S +T R++ + K + K+F++M + +N L+ + DE
Sbjct: 2 RECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDE 61
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
+ L++++ +G+EP + +YN+++ AF + + A L M +KG D++T++T++
Sbjct: 62 ANRLYEEMV-SVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTII 120
Query: 206 LGFYSNGRFADA-EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
G G+ +A E ++ M+ N +YNA ++GL ++ ++A +L+ EM SK
Sbjct: 121 SGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGY 180
Query: 265 NPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFN 321
PD T+ ++ G G + EAK++++ G + + L+ + ++G D A
Sbjct: 181 VPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMK 240
Query: 322 LCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
L K ++ + D ++ LA++ ++EA+E+
Sbjct: 241 LFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEM 276
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 104/235 (44%), Gaps = 39/235 (16%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A++ FD MP R V+++N LL A K DE LFKD+ K G PD V+YN+I+
Sbjct: 203 AKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAK-GYMPDTVTYNSIL 261
Query: 171 KAFVDKGSLD-----------------------------------SANTLLYEMEKKGIR 195
K ++D A+ +L EM K G
Sbjct: 262 LGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAV 321
Query: 196 LDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALEL 255
D++T+N LL G A +++ TMV+ P++ SY+ L+GL + A L
Sbjct: 322 PDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVL 381
Query: 256 VGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLV 307
M +++ PDV TF L+ G G L+EAK ++ SGC + + L+
Sbjct: 382 FDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLM 436
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 106/210 (50%), Gaps = 4/210 (1%)
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
P+ ++ ++K+F +G L L +M GI D I +N L+ G+ GR +A ++
Sbjct: 6 PNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRL 65
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
+E MV++ + P++ +YN+ L+ E + K+A+EL M K PDV T+ +I G
Sbjct: 66 YEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCK 125
Query: 281 EGNLEEA-KRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQA 336
G + EA + ++K GC N + L+ +C+ +++ A+ L + S+ + D
Sbjct: 126 TGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNI 185
Query: 337 PLQLVVDRLAKELRVEEAKELVELGKTNSY 366
++ L + +V EAK+ + + Y
Sbjct: 186 TYNTILSGLCRMGKVSEAKQFFDSMPSRGY 215
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 104/217 (47%), Gaps = 9/217 (4%)
Query: 81 EHQKQYKDISKEGF-------TARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNAL 133
E K +KD+ +G+ + L+ L K+ M E A ++F +M C +++ +
Sbjct: 237 EAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDE-AEEMFKKMVASGCAPNGATYSIV 295
Query: 134 LGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKG 193
L +KK D+ + +++ K+G PD+V+YN ++ +D A+ L M G
Sbjct: 296 LSGHCRAKKVDDAHKVLEEM-SKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNG 354
Query: 194 IRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKAL 253
D+++++ +L G + DA +++ M+ + P+V ++N +DGL + +A
Sbjct: 355 CAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAK 414
Query: 254 ELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
+L+ +M PD + L+ G +G +A R
Sbjct: 415 DLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRL 451
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 109/268 (40%), Gaps = 11/268 (4%)
Query: 2 SFPSRLLSCSFSTTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYT 61
S PSR +S A ++ +YKE + FK G + +T Y
Sbjct: 209 SMPSR----GYSPDVVA-----YNGLLDALYKEGKTDEAMKLFKDVIAKG-YMPDTVTYN 258
Query: 62 GTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGR 121
+ LA EE+ + + +++ + +A ++A KV +EM
Sbjct: 259 SILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKI 318
Query: 122 NCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDS 181
V+++N LL + D+ LF + G PD+VSY+ ++ +
Sbjct: 319 GAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDN-GCAPDIVSYSVVLNGLCKTNKVHD 377
Query: 182 ANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLD 241
A L M ++ + D++TFN L+ G G+ +A+ + + M P+ +YN ++
Sbjct: 378 ARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMN 437
Query: 242 GLAIEKQTKKALELVGEMRSKEINPDVF 269
GL + + +A L M+ K D F
Sbjct: 438 GLRKQGRHIQADRLTQAMKEKGFLSDCF 465
>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 950
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 133/264 (50%), Gaps = 6/264 (2%)
Query: 99 IALYG--KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHK 156
I ++G K ++A +FDEM R + ++ +L +KK + LF +
Sbjct: 203 ILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKM-RA 261
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
G DL++YN ++ F G LD A TLL + K G L +I + L+ G + R+ +
Sbjct: 262 SGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEE 321
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
A ++ M+ N++P+V Y + GL+ E + +AL L+GEM + + PD + ALIK
Sbjct: 322 AHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIK 381
Query: 277 GFVNEGNLEEAKRW---YNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV 333
GF + G L+EA+ +K C N + +L+ +C+ G ++ A ++ K CL
Sbjct: 382 GFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLP 441
Query: 334 DQAPLQLVVDRLAKELRVEEAKEL 357
+++ L K R+EEA+ L
Sbjct: 442 SVVTFNSLINGLCKANRLEEARLL 465
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 131/294 (44%), Gaps = 25/294 (8%)
Query: 89 ISKEGFTARLIALYG-------KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSK 141
++K+G +I YG +A +E A + +M N + V+ + ++
Sbjct: 294 LTKDGHILGVIG-YGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEG 352
Query: 142 KFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITF 201
+ E L ++ + G+ PD + YN +IK F D G LD A +L E+ K + T+
Sbjct: 353 RVTEALTLLGEMTER-GLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTY 411
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM-- 259
+ L+ G NG A+ I++ M + P+V ++N+ ++GL + ++A L +M
Sbjct: 412 SILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEI 471
Query: 260 -----------RSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKL 305
+ + D+ + +++ G + +A + + SG + + +
Sbjct: 472 VRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNI 531
Query: 306 LVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
L+ C+ G+++ AF L K + + D ++D L + R E+A E+ E
Sbjct: 532 LINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFE 585
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/275 (20%), Positives = 115/275 (41%), Gaps = 17/275 (6%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
+IRG+ +E + + + ++ G R +T Y ++ + E + ++
Sbjct: 344 MIRGLSQEGRVTEALTLLGEMTERG-LRPDTICYNALIKGFCDMGYLDEAESLRLEISKH 402
Query: 87 KDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEV 146
+ LI K + A+ +F EM C +V++FN+L+ + + +E
Sbjct: 403 DCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEA 462
Query: 147 DGLFKDLPHKLGIEP--------------DLVSYNTIIKAFVDKGSLDSANTLLYEMEKK 192
LF + ++ +P D+ S +++ + G + A LL ++
Sbjct: 463 RLLFYQM--EIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDS 520
Query: 193 GIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKA 252
G+ D+ T+N L+ GF G A K+++ M P+ +Y +DGL + + A
Sbjct: 521 GVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDA 580
Query: 253 LELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
LE+ +M K P+ T+ ++ E N+ A
Sbjct: 581 LEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLA 615
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 89/194 (45%), Gaps = 3/194 (1%)
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
+++ +I+A+ + G + A M + DL FN +L F A ++ M
Sbjct: 130 AFSVLIEAYSEAGMDEKAVESFSLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQM 189
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
+ N+ P+V +Y + GL +T+ AL L EM + I P+ + ++ G +
Sbjct: 190 LKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKI 249
Query: 285 EEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLV 341
+A+R ++K SGC + + +L+ C+ G LD AF L + + ++ +
Sbjct: 250 FDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCL 309
Query: 342 VDRLAKELRVEEAK 355
++ L + R EEA
Sbjct: 310 INGLFRARRYEEAH 323
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 96/236 (40%), Gaps = 39/236 (16%)
Query: 52 RFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENA 111
R RT + G + + NA W + + E + IS E F+ LI Y +A M E A
Sbjct: 91 RCRTVQDLIIGKLIK-ENAFELYW-KVLQELKNSAIKISSEAFSV-LIEAYSEAGMDEKA 147
Query: 112 RKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIK 171
+ F M +C+ PDL ++N I+
Sbjct: 148 VESFSLMRDFDCK------------------------------------PDLFAFNLILH 171
Query: 172 AFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRP 231
V K + A + +M K + D++T+ L+ G + DA +++ M + + P
Sbjct: 172 FLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILP 231
Query: 232 NVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
N Y+ L GL K+ A L +MR+ N D+ T+ L+ GF G L++A
Sbjct: 232 NQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDA 287
>gi|297849070|ref|XP_002892416.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338258|gb|EFH68675.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 459
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 155/355 (43%), Gaps = 40/355 (11%)
Query: 44 FKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYG 103
F + ++G FR + Y+ + +LA ++ F +++IL + +E LI YG
Sbjct: 69 FHQYQEMG-FRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMALIQHYG 127
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
KA + A VF ++ +C +T+ S N L+ V++ + ++ F D + + P+
Sbjct: 128 KAGWVDKAVDVFHKLTSFDCVRTIQSLNTLINVLVDNGELEKAKSFF-DGAKDMRLRPNS 186
Query: 164 VSYNTIIKAFVDK-----------------------------------GSLDSANTLLYE 188
VS+N +IK F+DK + A +LL +
Sbjct: 187 VSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNNDMGKATSLLED 246
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
M KK IR + +TF L+ G NG + +A+K+ M +P + +Y + L +
Sbjct: 247 MIKKRIRPNAVTFGLLMKGLCCNGEYNEAKKLMFDMEYRGCKPGLVNYGVLMSDLGKRGK 306
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKL 305
+A L+GEM+ + I PD + L+ EG + EA R + GC N A +++
Sbjct: 307 IDEAKILLGEMKKRRIKPDFVIYNILVNHLCTEGRVPEAYRTLTEMQMKGCKPNAATYRM 366
Query: 306 LVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVEL 360
+V C GD D N+ + R A +V L K ++ A ++E+
Sbjct: 367 IVDGFCRIGDFDSGLNVLNAMLASRHSPTPATFVRMVSGLIKGGNLDHACFVLEV 421
>gi|212275364|ref|NP_001130677.1| uncharacterized protein LOC100191780 [Zea mays]
gi|194707568|gb|ACF87868.1| unknown [Zea mays]
gi|195624402|gb|ACG34031.1| membrane-associated salt-inducible protein like [Zea mays]
gi|195653371|gb|ACG46153.1| membrane-associated salt-inducible protein like [Zea mays]
gi|413937895|gb|AFW72446.1| putative membrane-associated salt-inducible protein [Zea mays]
Length = 471
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 130/273 (47%), Gaps = 4/273 (1%)
Query: 90 SKEGFTARLIALYGKAAMFENARKVF-DEMPGRNCEQTVLSFNALLGACVNSKKFDEVDG 148
+ E A ++ Y A + E A F P + L FNALL + +++ V
Sbjct: 107 TTEAHLAAVLCSYASANLPEKAIDAFRSAAPSLPTPNSPLPFNALLSTFIRCRRYRRVPV 166
Query: 149 LFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
LF +L + I P+ SY ++KA+ A L M ++GI + TL+
Sbjct: 167 LFAELSKEFSITPNATSYGILVKAYCMARDDAKAKQALDLMREQGISPTNRIYTTLIDSM 226
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDV 268
Y +AE +W+ MV P+V +YN + A+ + ++ +E++ EM + + PD
Sbjct: 227 YKRKMTNEAESLWKEMVESECEPDVATYNVKAMYYALHGKPEEVMEVMTEMEAAGVKPDT 286
Query: 269 FTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKR 325
T+ L+ + G LE+AK Y+ + GC + A +K ++ +C GD D + K
Sbjct: 287 TTYNFLMTSYCKSGKLEDAKVLYHSLAEKGCSADAATYKHMLAELCAYGDFDAGLGIFKD 346
Query: 326 TFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
+ R + D ++ +V+ LAK RV +AKE+V
Sbjct: 347 SLKRRKVPDFRTMKGLVEGLAKGGRVADAKEVV 379
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 77/167 (46%), Gaps = 2/167 (1%)
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
+T + ++Y K M A ++ EM CE V ++N K +EV + ++
Sbjct: 219 YTTLIDSMY-KRKMTNEAESLWKEMVESECEPDVATYNVKAMYYALHGKPEEVMEVMTEM 277
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
G++PD +YN ++ ++ G L+ A L + + +KG D T+ +L + G
Sbjct: 278 -EAAGVKPDTTTYNFLMTSYCKSGKLEDAKVLYHSLAEKGCSADAATYKHMLAELCAYGD 336
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMR 260
F I++ + P+ R+ ++GLA + A E+V E++
Sbjct: 337 FDAGLGIFKDSLKRRKVPDFRTMKGLVEGLAKGGRVADAKEVVAEVK 383
>gi|356532610|ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Glycine max]
Length = 642
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/364 (25%), Positives = 161/364 (44%), Gaps = 41/364 (11%)
Query: 44 FKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYG 103
FK + +G ++ + ++ A++ FR +EE+L K+ + + E + YG
Sbjct: 48 FKSGTQMGSYKLGDLSFYSLIESHASSLDFRSLEEVLHQMKRERRVFLEKNFIVMFKAYG 107
Query: 104 KAAMFENARKVFDEMPGR-NCEQTVLSFNALLGACVNSKKFDEVDGLFKDL--PHKLGIE 160
KA + E A +F M G C+QTV SFN++L V F+ + + L I
Sbjct: 108 KAHLPEKAVDLFHRMWGEFQCKQTVKSFNSVLNVIVQEGLFNRALEFYNHVVASKSLNIH 167
Query: 161 PDLVSYNTIIKA-----FVDKG------------------------------SLDSANTL 185
P+ +++N +IKA VDK +D A +L
Sbjct: 168 PNALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSL 227
Query: 186 LYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAI 245
L EM+ +G +L+ FN L+ G A K+ + M PN +YNA + GL +
Sbjct: 228 LDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCL 287
Query: 246 EKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW---YNKSGCGMNKAI 302
+ + +KA+ L+ +M S + P+ TF LI GFV +G + R G N+ +
Sbjct: 288 KGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYV 347
Query: 303 FKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGK 362
+ L+ +C++G + A L K + C + ++D L +E +++EA+ + K
Sbjct: 348 YSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMK 407
Query: 363 TNSY 366
Y
Sbjct: 408 NKGY 411
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 126/264 (47%), Gaps = 6/264 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHK 156
LI+ K A K+ D M + C +++NAL+ G C+ K V L + + +K
Sbjct: 246 LISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNK 305
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
P+ V++ T+I FV +G +L +E +G R + +++L+ G G+F
Sbjct: 306 --CVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQ 363
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
A ++W+ MV PN Y+A +DGL E + +A + EM++K P+ FT+ +L++
Sbjct: 364 AMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMR 423
Query: 277 GFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV 333
G+ G+ +A + + + C N+ + +L+ +C+ G A + K+ S +
Sbjct: 424 GYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRGIKL 483
Query: 334 DQAPLQLVVDRLAKELRVEEAKEL 357
D ++ VE+ +L
Sbjct: 484 DVVAYSSMIHGFCNANLVEQGLKL 507
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 87/167 (52%), Gaps = 1/167 (0%)
Query: 130 FNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEM 189
+++L+ KF++ L+K++ K G P+ + Y+ +I +G LD A L EM
Sbjct: 348 YSSLISGLCKEGKFNQAMELWKEMVGK-GCGPNTIVYSALIDGLCREGKLDEARGFLSEM 406
Query: 190 EKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQT 249
+ KG + T+++L+ G++ G A +W+ M N N N Y+ ++GL + +
Sbjct: 407 KNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKF 466
Query: 250 KKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGC 296
+AL + +M S+ I DV + ++I GF N +E+ + +N+ C
Sbjct: 467 MEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLC 513
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 91/212 (42%), Gaps = 38/212 (17%)
Query: 96 ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPH 155
+ LI+ K F A +++ EM G+ C + ++AL+ K DE G ++ +
Sbjct: 349 SSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKN 408
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
K G P+ +Y+++++ + + G A + EM + + ++ L+ G +G+F
Sbjct: 409 K-GYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFM 467
Query: 216 DAEKIWETMV-------------------NMN------------------VRPNVRSYNA 238
+A +W+ M+ N N V+P+V +YN
Sbjct: 468 EALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITYNI 527
Query: 239 RLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
L+ I+K +A++++ M + +PD T
Sbjct: 528 LLNAFCIQKSIFRAIDILNIMLDQGCDPDFIT 559
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 127/257 (49%), Gaps = 4/257 (1%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
KA E ARKVFDEM V+S+N LL E +F ++ + G+ PD+
Sbjct: 235 KAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQR-GLVPDV 293
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
V++ ++I A G+L+ A L+ +M ++G+R++ +TF L+ GF G DA E
Sbjct: 294 VTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEE 353
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M ++P+V YNA ++G + A EL+ EM +K + PDV T+ +I G+ GN
Sbjct: 354 MRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGN 413
Query: 284 LEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL 340
L+ A + K G + + L+ +CE+ L+ A L + D+
Sbjct: 414 LDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTT 473
Query: 341 VVDRLAKELRVEEAKEL 357
++D KE VE+A L
Sbjct: 474 LIDGHCKEGNVEKALSL 490
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 105/197 (53%), Gaps = 2/197 (1%)
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
FTA LI + K ++A +EM + +V+ +NAL+ + D L +++
Sbjct: 331 FTA-LIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREM 389
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
K ++PD+V+Y+TII + G+LDSA L +M KKG+ D IT+++L+ G R
Sbjct: 390 EAKR-VKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKR 448
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
DA +++E M+ + V+P+ +Y +DG E +KAL L EM K + PDV T+
Sbjct: 449 LNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSV 508
Query: 274 LIKGFVNEGNLEEAKRW 290
LI G +EA R
Sbjct: 509 LINGLSKSARTKEAHRL 525
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 138/294 (46%), Gaps = 9/294 (3%)
Query: 67 LANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQT 126
L +A+RF + +L H ++ R + G+ E A V +M G C
Sbjct: 133 LPSARRF--LSSMLRHGVA-PNVYTYNILVRALCARGR---LEEAVGVVGDMRGAGCAPN 186
Query: 127 VLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLL 186
+++N L+ A + + D + + + + +P+LV++N+++ G ++ A +
Sbjct: 187 AVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVF 246
Query: 187 YEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIE 246
EM ++G+ D++++NTLL G+ G ++ ++ M + P+V ++ + +
Sbjct: 247 DEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKA 306
Query: 247 KQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK-SGCGMNKAI--F 303
++A+ LV +MR + + + TF ALI GF +G L++A + CG+ ++ +
Sbjct: 307 GNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCY 366
Query: 304 KLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
L+ C+ G +D A L + ++R D ++ K ++ A +L
Sbjct: 367 NALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQL 420
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 100/234 (42%), Gaps = 41/234 (17%)
Query: 126 TVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTL 185
+V ++NA+L A ++ L L H G+ P++ +YN +++A +G L+ A +
Sbjct: 117 SVPAYNAVLLALSDASLPSARRFLSSMLRH--GVAPNVYTYNILVRALCARGRLEEAVGV 174
Query: 186 LYEMEKKGIRLDLITFNTLLL------------------------------------GFY 209
+ +M G + +T+NTL+ G
Sbjct: 175 VGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLC 234
Query: 210 SNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVF 269
GR A K+++ MV + P+V SYN L G ++L + EM + + PDV
Sbjct: 235 KAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVV 294
Query: 270 TFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAF 320
TF +LI GNLE+A + G MN+ F L+ C+KG LD A
Sbjct: 295 TFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDAL 348
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 122/252 (48%), Gaps = 27/252 (10%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHK 156
LI Y K + AR++ EM + + V++++ ++ G C K +D F+ L K
Sbjct: 369 LINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYC----KVGNLDSAFQ-LNQK 423
Query: 157 L---GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
+ G+ PD ++Y+++I+ ++ L+ A L M + G++ D T+ TL+ G G
Sbjct: 424 MLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGN 483
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTF-- 271
A + + M+ V P+V +Y+ ++GL+ +TK+A L+ ++ ++ PD +
Sbjct: 484 VEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDA 543
Query: 272 -------------YALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGD 315
AL+KGF +G ++EA + Y ++ +++ +L+ C G+
Sbjct: 544 LMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGN 603
Query: 316 LDFAFNLCKRTF 327
+ A + K+
Sbjct: 604 VRKALSFHKQML 615
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 9/142 (6%)
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
+N +LL S+ A + +M+ V PNV +YN + L + ++A+ +VG+M
Sbjct: 120 AYNAVLLAL-SDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDM 178
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN----KSGCGMNKAIFKLLVPFVCEKGD 315
R P+ T+ L+ F G L+ A+R + + N F +V +C+ G
Sbjct: 179 RGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGR 238
Query: 316 LDFAFNLCKRTFSERCLVDQAP 337
++ A ++ F E AP
Sbjct: 239 MEGA----RKVFDEMVREGLAP 256
>gi|449444522|ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 783
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 133/264 (50%), Gaps = 6/264 (2%)
Query: 99 IALYG--KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHK 156
I ++G K ++A +FDEM R + ++ +L +KK + LF +
Sbjct: 203 ILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRAS 262
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
G DL++YN ++ F G LD A TLL + K G L +I + L+ G + R+ +
Sbjct: 263 -GCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEE 321
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
A ++ M+ N++P+V Y + GL+ E + +AL L+GEM + + PD + ALIK
Sbjct: 322 AHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIK 381
Query: 277 GFVNEGNLEEAKRW---YNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV 333
GF + G L+EA+ +K C N + +L+ +C+ G ++ A ++ K CL
Sbjct: 382 GFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLP 441
Query: 334 DQAPLQLVVDRLAKELRVEEAKEL 357
+++ L K R+EEA+ L
Sbjct: 442 SVVTFNSLINGLCKANRLEEARLL 465
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 131/294 (44%), Gaps = 25/294 (8%)
Query: 89 ISKEGFTARLIALYG-------KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSK 141
++K+G +I YG +A +E A + +M N + V+ + ++
Sbjct: 294 LTKDGHILGVIG-YGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEG 352
Query: 142 KFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITF 201
+ E L ++ + G+ PD + YN +IK F D G LD A +L E+ K + T+
Sbjct: 353 RVTEALTLLGEMTER-GLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTY 411
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM-- 259
+ L+ G NG A+ I++ M + P+V ++N+ ++GL + ++A L +M
Sbjct: 412 SILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEI 471
Query: 260 -----------RSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKL 305
+ + D+ + +++ G + +A + + SG + + +
Sbjct: 472 VRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNI 531
Query: 306 LVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
L+ C+ G+++ AF L K + + D ++D L + R E+A E+ E
Sbjct: 532 LINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFE 585
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 86/183 (46%), Gaps = 7/183 (3%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNS---KKFDEVDGLFKDLPHKLGIEPDLV 164
FE KV E+ + + +F+ L+ A + +K E GL +D K PDL
Sbjct: 109 FELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLMRDFDCK----PDLF 164
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
++N I+ V K + A + +M K + D++T+ L+ G + DA +++ M
Sbjct: 165 AFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEM 224
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
+ + PN Y+ L GL K+ A L +MR+ N D+ T+ L+ GF G L
Sbjct: 225 TDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYL 284
Query: 285 EEA 287
++A
Sbjct: 285 DDA 287
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/275 (20%), Positives = 115/275 (41%), Gaps = 17/275 (6%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
+IRG+ +E + + + ++ G R +T Y ++ + E + ++
Sbjct: 344 MIRGLSQEGRVTEALTLLGEMTERG-LRPDTICYNALIKGFCDMGYLDEAESLRLEISKH 402
Query: 87 KDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEV 146
+ LI K + A+ +F EM C +V++FN+L+ + + +E
Sbjct: 403 DCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEA 462
Query: 147 DGLFKDLPHKLGIEP--------------DLVSYNTIIKAFVDKGSLDSANTLLYEMEKK 192
LF + ++ +P D+ S +++ + G + A LL ++
Sbjct: 463 RLLFYQM--EIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDS 520
Query: 193 GIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKA 252
G+ D+ T+N L+ GF G A K+++ M P+ +Y +DGL + + A
Sbjct: 521 GVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDA 580
Query: 253 LELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
LE+ +M K P+ T+ ++ E N+ A
Sbjct: 581 LEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLA 615
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 89/194 (45%), Gaps = 3/194 (1%)
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
+++ +I+A+ + G + A M + DL FN +L F A ++ M
Sbjct: 130 AFSVLIEAYSEAGMDEKAVESFGLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQM 189
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
+ N+ P+V +Y + GL +T+ AL L EM + I P+ + ++ G +
Sbjct: 190 LKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKI 249
Query: 285 EEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLV 341
+A+R ++K SGC + + +L+ C+ G LD AF L + + ++ +
Sbjct: 250 FDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCL 309
Query: 342 VDRLAKELRVEEAK 355
++ L + R EEA
Sbjct: 310 INGLFRARRYEEAH 323
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 127/257 (49%), Gaps = 4/257 (1%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
KA E ARKVFDEM V+S+N LL E +F ++ + G+ PD+
Sbjct: 93 KAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQR-GLVPDV 151
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
V++ ++I A G+L+ A L+ +M ++G+R++ +TF L+ GF G DA E
Sbjct: 152 VTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEE 211
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M ++P+V YNA ++G + A EL+ EM +K + PDV T+ +I G+ GN
Sbjct: 212 MRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGN 271
Query: 284 LEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL 340
L+ A + K G + + L+ +CE+ L+ A L + D+
Sbjct: 272 LDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTT 331
Query: 341 VVDRLAKELRVEEAKEL 357
++D KE VE+A L
Sbjct: 332 LIDGHCKEGNVEKALSL 348
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 105/197 (53%), Gaps = 2/197 (1%)
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
FTA LI + K ++A +EM + +V+ +NAL+ + D L +++
Sbjct: 189 FTA-LIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREM 247
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
K ++PD+V+Y+TII + G+LDSA L +M KKG+ D IT+++L+ G R
Sbjct: 248 EAKR-VKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKR 306
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
DA +++E M+ + V+P+ +Y +DG E +KAL L EM K + PDV T+
Sbjct: 307 LNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSV 366
Query: 274 LIKGFVNEGNLEEAKRW 290
LI G +EA R
Sbjct: 367 LINGLSKSARTKEAHRL 383
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 122/253 (48%), Gaps = 3/253 (1%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
E A V +M G C +++N L+ A + + D + + + + +P+LV++N
Sbjct: 26 LEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFN 85
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
+++ G ++ A + EM ++G+ D++++NTLL G+ G ++ ++ M
Sbjct: 86 SMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQR 145
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+ P+V ++ + + ++A+ LV +MR + + + TF ALI GF +G L++A
Sbjct: 146 GLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDA 205
Query: 288 KRWYNK-SGCGMNKAI--FKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDR 344
+ CG+ ++ + L+ C+ G +D A L + ++R D ++
Sbjct: 206 LLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISG 265
Query: 345 LAKELRVEEAKEL 357
K ++ A +L
Sbjct: 266 YCKVGNLDSAFQL 278
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 86/202 (42%), Gaps = 39/202 (19%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLL----------- 206
G+ P++ +YN +++A +G L+ A ++ +M G + +T+NTL+
Sbjct: 5 GVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGA 64
Query: 207 -------------------------GFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLD 241
G GR A K+++ MV + P+V SYN L
Sbjct: 65 ERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLS 124
Query: 242 GLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGM 298
G ++L + EM + + PDV TF +LI GNLE+A + G M
Sbjct: 125 GYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRM 184
Query: 299 NKAIFKLLVPFVCEKGDLDFAF 320
N+ F L+ C+KG LD A
Sbjct: 185 NEVTFTALIDGFCKKGFLDDAL 206
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 122/252 (48%), Gaps = 27/252 (10%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHK 156
LI Y K + AR++ EM + + V++++ ++ G C K +D F+ L K
Sbjct: 227 LINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYC----KVGNLDSAFQ-LNQK 281
Query: 157 L---GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
+ G+ PD ++Y+++I+ ++ L+ A L M + G++ D T+ TL+ G G
Sbjct: 282 MLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGN 341
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTF-- 271
A + + M+ V P+V +Y+ ++GL+ +TK+A L+ ++ ++ PD +
Sbjct: 342 VEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDA 401
Query: 272 -------------YALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGD 315
AL+KGF +G ++EA + Y ++ +++ +L+ C G+
Sbjct: 402 LMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGN 461
Query: 316 LDFAFNLCKRTF 327
+ A + K+
Sbjct: 462 VRKALSFHKQML 473
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 8/118 (6%)
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
MV V PNV +YN + L + ++A+ +VG+MR P+ T+ L+ F G
Sbjct: 1 MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60
Query: 284 LEEAKRWYN----KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAP 337
L+ A+R + + N F +V +C+ G ++ A ++ F E AP
Sbjct: 61 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGA----RKVFDEMVREGLAP 114
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 35/174 (20%), Positives = 71/174 (40%), Gaps = 4/174 (2%)
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
M + G+ ++ T+N L+ + GR +A + M PN +YN + +
Sbjct: 1 MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60
Query: 249 TKKALELVGEMRSK-EINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFK 304
A +V MR + P++ TF +++ G G +E A++ ++ + G + +
Sbjct: 61 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120
Query: 305 LLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
L+ C+ G L + + + D ++ K +E+A LV
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALV 174
>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
Length = 655
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 122/266 (45%), Gaps = 5/266 (1%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
F +A +V +++ R C V + N +L A + D+ L +DLP G EPD+VSYN
Sbjct: 173 FRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLP-SFGCEPDVVSYN 231
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
++K L+ EM + +++TFNTL+ NG F ++ M
Sbjct: 232 AVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEH 291
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
P++R Y +DG+ E K A E++ M S + P+V + L+KG + EE
Sbjct: 292 GCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEET 351
Query: 288 KRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDR 344
+ + C ++ F +LV F C+ G +D L ++ C+ D V++
Sbjct: 352 EELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVING 411
Query: 345 LAKELRVEEAKELVELGKTNSYCRYN 370
KE ++EA L++ T C+ N
Sbjct: 412 FCKEGLIDEAVMLLK-SMTACGCKPN 436
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 134/310 (43%), Gaps = 16/310 (5%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMP 119
Y ++ L AKR+ ++E++E + LI+ + +FE +V +M
Sbjct: 230 YNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMA 289
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL 179
C + + ++ + +P G++P++V YNT++K
Sbjct: 290 EHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMP-SYGLKPNVVCYNTLLKGLCSAERW 348
Query: 180 DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNAR 239
+ LL EM K LD +TFN L+ F NG ++ E M+ P+V +Y
Sbjct: 349 EETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTV 408
Query: 240 LDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN------- 292
++G E +A+ L+ M + P+ ++ ++KG + A+RW +
Sbjct: 409 INGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCS------AERWVDAEDLMSQ 462
Query: 293 --KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELR 350
+ GC +N F L+ F+C+KG ++ A L K+ C D V+D L K +
Sbjct: 463 MIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGK 522
Query: 351 VEEAKELVEL 360
+EA EL+ +
Sbjct: 523 TDEALELLNV 532
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/376 (21%), Positives = 155/376 (41%), Gaps = 77/376 (20%)
Query: 22 KFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILE 81
+ ++I GI KE +LK + + G + N Y ++ L +A+R+ EE+L
Sbjct: 298 RMYATIIDGICKEGHLKVAHEILNRMPSYG-LKPNVVCYNTLLKGLCSAERWEETEELL- 355
Query: 82 HQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSK 141
A MF+ ++C ++FN L+ +
Sbjct: 356 -----------------------AEMFD-----------KDCPLDDVTFNILVDFFCQNG 381
Query: 142 KFDEVDGLFKD-LPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLIT 200
D V L + L H G PD+++Y T+I F +G +D A LL M G + + I+
Sbjct: 382 LVDRVIELLEQMLVH--GCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTIS 439
Query: 201 FNTLLLGFYSNGRFADAEKIWETMVNM--------------------------------- 227
+ +L G S R+ DAE + M+
Sbjct: 440 YTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQML 499
Query: 228 --NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLE 285
P++ SY+ +DGL +T +ALEL+ M +K ++P+ + ++ EG +
Sbjct: 500 VNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRIN 559
Query: 286 EAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVV 342
+ + ++ + + ++ ++ +C++G+ + A S C+ +++ +++
Sbjct: 560 KVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILI 619
Query: 343 DRLAKELRVEEAKELV 358
LA E V+EA+E++
Sbjct: 620 RGLASEGFVKEAQEML 635
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 100/234 (42%), Gaps = 7/234 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
++A Y +A E+AR++ +P T F + C + D + + ++P +
Sbjct: 96 MVAGYCRAGQLESARRLAAAVPVPPNAYTY--FPVVRALCARGRIADAL-AVLDEMPRR- 151
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G P Y+ I++A G SA +L ++ +G LD+ N +L G A
Sbjct: 152 GCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDKA 211
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ + + P+V SYNA L GL + K+ EL+ EM P++ TF LI
Sbjct: 212 LHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISY 271
Query: 278 FVNEGNLE---EAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFS 328
G E E + GC + ++ ++ +C++G L A + R S
Sbjct: 272 LCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPS 325
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 105/237 (44%), Gaps = 2/237 (0%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
+VI G KE + V K + G + NT YT ++ L +A+R+ E+++ Q
Sbjct: 407 TVINGFCKEGLIDEAVMLLKSMTACG-CKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQ 465
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
LI K + E A ++ +M C ++S++ ++ + K DE
Sbjct: 466 QGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDE 525
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
L + +K G+ P+ + Y++I A +G ++ + ++ IR D + +N ++
Sbjct: 526 ALELLNVMVNK-GMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVI 584
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
G A + MV+ PN +Y + GLA E K+A E++ E+ SK
Sbjct: 585 SSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSK 641
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 142/299 (47%), Gaps = 39/299 (13%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI +A A K+F +M NC TV ++ L+ A S + E LF ++ K
Sbjct: 270 LIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEK- 328
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G EP++ +Y +I + +D A +L EM +KG+ ++T+N L+ G+ G DA
Sbjct: 329 GCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDA 388
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+I + M + + PN R+YN + GL +++ KA+ L+ +M ++++P + T+ +LI G
Sbjct: 389 FEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHG 448
Query: 278 -----------------------------------FVNEGNLEEAKRWYNK---SGCGMN 299
EG +EEA ++ G N
Sbjct: 449 QCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKAN 508
Query: 300 KAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
+ I+ L+ C+ G +D A++L +R ++ CL + ++++ L KE +++EA LV
Sbjct: 509 EVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLV 567
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 138/306 (45%), Gaps = 15/306 (4%)
Query: 66 RLANAKRFRWIEEILEHQKQYKDISKEG----------FTARLIALYGKAAMFENARKVF 115
R++ K IE++L + ++ ++ +G + L++L K + + + V+
Sbjct: 124 RISMIKSCCSIEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSL-SKFLLIDEMKTVY 182
Query: 116 DEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVD 175
E+ + +FNA++ E + L+ + G+ PD +Y ++I
Sbjct: 183 LELLNNQISPNIYTFNAMVNGYCKIGNVVEAE-LYASKIVQAGLHPDTFTYTSLILGHCR 241
Query: 176 KGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRS 235
+D+A + M +KG + + +++ L+ G GR +A K++ M N P VR+
Sbjct: 242 NKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRT 301
Query: 236 YNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW---YN 292
Y + L+ + +AL L EM+ K P+V T+ LI G E ++EA++ +
Sbjct: 302 YTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMS 361
Query: 293 KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVE 352
+ G + + L+ C++G +D AF + S C + ++ L K+ +V
Sbjct: 362 EKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVH 421
Query: 353 EAKELV 358
+A L+
Sbjct: 422 KAMALL 427
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 112/255 (43%), Gaps = 44/255 (17%)
Query: 81 EHQKQYKDISKEGFTARLIAL------YGKAAMFENARKVFDEMPGRNCEQTVLSFNALL 134
E +K ++S++G ++ Y K M ++A ++ D M +C ++N L+
Sbjct: 352 EARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELI 411
Query: 135 -GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKA--------------------- 172
G C K + L K L KL P L++YN++I
Sbjct: 412 CGLCKKRKVHKAMALLNKMLERKLS--PSLITYNSLIHGQCKVNDLESAYRLLSLMNENG 469
Query: 173 ----------FVD----KGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAE 218
F+D +G ++ A TL ++ KG++ + + + L+ G+ G+ A
Sbjct: 470 LVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAY 529
Query: 219 KIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGF 278
+ E M+N PN +YN ++GL EK+ K+A LV +M + + P V T+ LI
Sbjct: 530 SLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEM 589
Query: 279 VNEGNLEEAKRWYNK 293
+ +G + A + +N
Sbjct: 590 LKDGAFDHALKVFNH 604
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/277 (19%), Positives = 120/277 (43%), Gaps = 22/277 (7%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K E A +FD + + + + + AL+ K D L + + + + P+
Sbjct: 486 KEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACL-PNS 544
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
+YN +I+ + + A++L+ +M G++ ++T+ L+ +G F A K++
Sbjct: 545 YTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNH 604
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
MV++ +P+V +Y A L + ++ +++ +M + I PD+ T+ LI G+ G
Sbjct: 605 MVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGL 664
Query: 284 LEEA---KRWYNKSGCGMNKAIFKLLVPFVCEKG------------------DLDFAFNL 322
A + +GC + I +L+ + + + + A L
Sbjct: 665 THRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKL 724
Query: 323 CKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
++ C +D + ++ ++ R+EEA+ LV
Sbjct: 725 FEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVH 761
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/363 (20%), Positives = 139/363 (38%), Gaps = 57/363 (15%)
Query: 54 RTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARK 113
+ N IYT + + +LE + LI K + A
Sbjct: 506 KANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASS 565
Query: 114 VFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAF 173
+ +M + TV+++ L+G + FD +F + LG +PD+ +Y + A+
Sbjct: 566 LVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMV-SLGYQPDVCTYTAFLHAY 624
Query: 174 VDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNV 233
+G L+ + ++ +M ++GI DL+T+ L+ G+ G A + MV+ +P++
Sbjct: 625 FSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSL 684
Query: 234 RSYNARLDGLAIEKQTKK------------------ALELVGEMRSKEINPDVFTFYALI 275
+ + L+ E + K+ AL+L +M DV + ALI
Sbjct: 685 YIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALI 744
Query: 276 KGFVNEGNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTF----- 327
GF + LEEA+ + G ++ I+ L+ C+ G A L
Sbjct: 745 AGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLL 804
Query: 328 ----SERCLV--------------------------DQAPLQLVVDRLAKELRVEEAKEL 357
S + LV D+ ++++D L K V+E EL
Sbjct: 805 PLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSEL 864
Query: 358 VEL 360
+++
Sbjct: 865 IDI 867
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 95/231 (41%), Gaps = 14/231 (6%)
Query: 147 DGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLL 206
DG FK +P L YNTI+ + +D T+ E+ I ++ TFN ++
Sbjct: 150 DGEFK-------FKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVN 202
Query: 207 GFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINP 266
G+ G +AE +V + P+ +Y + + G K A E+ M K
Sbjct: 203 GYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQR 262
Query: 267 DVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLC 323
+ ++ LI G G + EA + + + C + +L+ + G A NL
Sbjct: 263 NEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLF 322
Query: 324 KRTFSERCLVDQAPLQLVVDRLAKELRVEEAK----ELVELGKTNSYCRYN 370
+ C + +++D L KE +++EA+ E+ E G S YN
Sbjct: 323 NEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYN 373
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 75/171 (43%), Gaps = 1/171 (0%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
+E A K+F++M C V + AL+ ++ +E GL + + G+ P YN
Sbjct: 718 YEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKER-GMSPSEDIYN 776
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
+++ G A L+ M + G+ L ++ L+ G Y G A+ ++ +++
Sbjct: 777 SLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSC 836
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGF 278
+ ++ +DGL + EL+ M K P+ T+ LI+G
Sbjct: 837 GYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEGL 887
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G D+ Y +I F + L+ A L++ M+++G+ +N+LL G +A+A
Sbjct: 732 GCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEA 791
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ + MV + P + SY + GL IE +KA + + S N D + LI G
Sbjct: 792 VRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDG 851
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLV 307
+ ++E + + GC N + LL+
Sbjct: 852 LLKRDLVDECSELIDIMEEKGCQPNPLTYSLLI 884
Score = 41.6 bits (96), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 74/175 (42%), Gaps = 13/175 (7%)
Query: 73 FRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNA 132
+ E+++EH D+S G LIA + + E A+ + M R + +N+
Sbjct: 722 LKLFEKMVEHGCTI-DVSIYG---ALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNS 777
Query: 133 LLGACVNSKKFDE----VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
LL C + E VD + ++ G+ P L SY ++ +GS + A + +
Sbjct: 778 LLDCCCKLGVYAEAVRLVDAMVEN-----GLLPLLESYKLLVCGLYIEGSNEKAKAVFHG 832
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
+ G D + + L+ G + ++ + M +PN +Y+ ++GL
Sbjct: 833 LLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEGL 887
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 142/299 (47%), Gaps = 39/299 (13%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI +A A K+F +M NC TV ++ L+ A S + E LF ++ K
Sbjct: 270 LIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEK- 328
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G EP++ +Y +I + +D A +L EM +KG+ ++T+N L+ G+ G DA
Sbjct: 329 GCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDA 388
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+I + M + + PN R+YN + GL +++ KA+ L+ +M ++++P + T+ +LI G
Sbjct: 389 FEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHG 448
Query: 278 -----------------------------------FVNEGNLEEAKRWYNK---SGCGMN 299
EG +EEA ++ G N
Sbjct: 449 QCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKAN 508
Query: 300 KAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
+ I+ L+ C+ G +D A++L +R ++ CL + ++++ L KE +++EA LV
Sbjct: 509 EVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLV 567
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 117/259 (45%), Gaps = 4/259 (1%)
Query: 103 GKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPD 162
K + + + V+ E+ + +FNA++ E + L+ + G+ PD
Sbjct: 170 SKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAE-LYASKIVQAGLHPD 228
Query: 163 LVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWE 222
+Y ++I +D+A + M +KG + + +++ L+ G GR +A K++
Sbjct: 229 TFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFA 288
Query: 223 TMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEG 282
M N P VR+Y + L+ + +AL L EM+ K P+V T+ LI G E
Sbjct: 289 DMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKEN 348
Query: 283 NLEEAKRW---YNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQ 339
++EA++ ++ G + + L+ C++G +D AF + S C +
Sbjct: 349 KMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYN 408
Query: 340 LVVDRLAKELRVEEAKELV 358
++ L K+ +V +A L+
Sbjct: 409 ELICGLCKKRKVHKAMALL 427
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 112/255 (43%), Gaps = 44/255 (17%)
Query: 81 EHQKQYKDISKEGFTAR------LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL 134
E +K ++S++G LI Y K M ++A ++ D M +C ++N L+
Sbjct: 352 EARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELI 411
Query: 135 -GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKA--------------------- 172
G C K + L K L KL P L++YN++I
Sbjct: 412 CGLCKKRKVHKAMALLNKMLERKLS--PSLITYNSLIHGQCKVNDLESAYRLLSLMNENG 469
Query: 173 ----------FVD----KGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAE 218
F+D +G ++ A TL ++ KG++ + + + L+ G+ G+ A
Sbjct: 470 LVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAY 529
Query: 219 KIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGF 278
+ E M+N PN +YN ++GL EK+ K+A LV +M + + P V T+ LI
Sbjct: 530 SLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEM 589
Query: 279 VNEGNLEEAKRWYNK 293
+ +G + A + +N
Sbjct: 590 LKDGAFDHALKVFNH 604
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 114/266 (42%), Gaps = 5/266 (1%)
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
+TA LI Y K + A + + M C ++N L+ KK E L +
Sbjct: 512 YTA-LIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKM 570
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
+G++P +V+Y +I + G+ D A + M G + D+ T+ L ++S G
Sbjct: 571 L-TMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGM 629
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
+ + + M + P++ +Y +DG A T +A + + M P ++
Sbjct: 630 LEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSI 689
Query: 274 LIKGFVNEGNLEEAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV 333
LIK +E ++E + ++ G + + + V + + + A L ++ C +
Sbjct: 690 LIKNLSHENRMKETR---SEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTI 746
Query: 334 DQAPLQLVVDRLAKELRVEEAKELVE 359
D + ++ ++ R+EEA+ LV
Sbjct: 747 DVSIYGALIAGFCQQERLEEAQGLVH 772
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 96/207 (46%), Gaps = 4/207 (1%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K E A +FD + + + + + AL+ K D L + + + + P+
Sbjct: 486 KEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACL-PNS 544
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
+YN +I+ + + A++L+ +M G++ ++T+ L+ +G F A K++
Sbjct: 545 YTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNH 604
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
MV++ +P+V +Y A L + ++ +++ +M + I PD+ T+ LI G+ G
Sbjct: 605 MVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGL 664
Query: 284 LEEA---KRWYNKSGCGMNKAIFKLLV 307
A + +GC + I +L+
Sbjct: 665 THRAFDFLKCMVDTGCKPSLYIVSILI 691
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 75/374 (20%), Positives = 139/374 (37%), Gaps = 68/374 (18%)
Query: 54 RTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARK 113
+ N IYT + + +LE + LI K + A
Sbjct: 506 KANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASS 565
Query: 114 VFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAF 173
+ +M + TV+++ L+G + FD +F + LG +PD+ +Y + A+
Sbjct: 566 LVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMV-SLGYQPDVCTYTAFLHAY 624
Query: 174 VDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNV 233
+G L+ + ++ +M ++GI DL+T+ L+ G+ G A + MV+ +P++
Sbjct: 625 FSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSL 684
Query: 234 RSYNARLDGLAIEKQTKK-----------------------------ALELVGEMRSKEI 264
+ + L+ E + K+ AL+L +M
Sbjct: 685 YIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGC 744
Query: 265 NPDVFTFYALIKGFVNEGNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFN 321
DV + ALI GF + LEEA+ + G ++ I+ L+ C+ G A
Sbjct: 745 TIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVR 804
Query: 322 LCKRTF---------SERCLV--------------------------DQAPLQLVVDRLA 346
L S + LV D+ ++++D L
Sbjct: 805 LVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLL 864
Query: 347 KELRVEEAKELVEL 360
K V+E EL+++
Sbjct: 865 KRDLVDECSELIDI 878
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 95/231 (41%), Gaps = 14/231 (6%)
Query: 147 DGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLL 206
DG FK +P L YNTI+ + +D T+ E+ I ++ TFN ++
Sbjct: 150 DGEFK-------FKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVN 202
Query: 207 GFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINP 266
G+ G +AE +V + P+ +Y + + G K A E+ M K
Sbjct: 203 GYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQR 262
Query: 267 DVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLC 323
+ ++ LI G G + EA + + + C + +L+ + G A NL
Sbjct: 263 NEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLF 322
Query: 324 KRTFSERCLVDQAPLQLVVDRLAKELRVEEAK----ELVELGKTNSYCRYN 370
+ C + +++D L KE +++EA+ E+ E G S YN
Sbjct: 323 NEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYN 373
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 71/165 (43%), Gaps = 1/165 (0%)
Query: 99 IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLG 158
IA K +E A K+F++M C V + AL+ ++ +E GL + + G
Sbjct: 720 IADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKER-G 778
Query: 159 IEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAE 218
+ P YN+++ G A L+ M + G+ L ++ L+ G Y G A+
Sbjct: 779 MSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAK 838
Query: 219 KIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
++ +++ + ++ +DGL + EL+ M K+
Sbjct: 839 AVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKD 883
Score = 38.5 bits (88), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 84/212 (39%), Gaps = 17/212 (8%)
Query: 73 FRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNA 132
+ E+++EH D+S G LIA + + E A+ + M R + +N+
Sbjct: 733 LKLFEKMVEHGCTI-DVSIYG---ALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNS 788
Query: 133 LLGACVNSKKFDE----VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
LL C + E VD + ++ G+ P L SY ++ +GS + A + +
Sbjct: 789 LLDCCCKLGVYAEAVRLVDAMVEN-----GLLPLLESYKLLVCGLYIEGSNEKAKAVFHG 843
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
+ G D + + L+ G + ++ + M + A L LA
Sbjct: 844 LLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKDATAQADIACAALMRLAAANS 903
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
TK ALE E+R +N T + G VN
Sbjct: 904 TKGALE-DHELRGLSVNHGELT---QLSGLVN 931
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 130/269 (48%), Gaps = 9/269 (3%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LIA KA FE A +F+EM +N + V++F AL+ + + + + DL L
Sbjct: 573 LIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDIL-DLMGNL 631
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ P++V+YN ++ G ++ A L EM G D IT+ +L+ R DA
Sbjct: 632 GVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDA 691
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ + + P+ +YN +DGL QT++A+ ++ EM K +PDV T+ LI
Sbjct: 692 LQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDS 751
Query: 278 FVNEGNLEEAKRWYNKSG------CGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERC 331
G+LEEA+R + C N + +L+ +C+ G +D A L + + C
Sbjct: 752 LCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSC 811
Query: 332 --LVDQAPLQLVVDRLAKELRVEEAKELV 358
L + +D L K+ + EA EL+
Sbjct: 812 DVLPNIITYNSFLDGLCKQSMMAEACELM 840
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 151/359 (42%), Gaps = 40/359 (11%)
Query: 51 GRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFT-ARLIALYGKAAMFE 109
G + N Y V L A + ++E K ++ + T + L+ + KA+ +
Sbjct: 389 GGYVPNVITYNALVNGLCKADKMERAHAMIESMVD-KGVTPDVITYSVLVDAFCKASRVD 447
Query: 110 NARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTI 169
A ++ M R C V++FN+++ S + E +F D+ K G+ PD ++Y T+
Sbjct: 448 EALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTL 507
Query: 170 IKAFVDKGSLDSANTLLYEME---------------------------KKGIRLDLI--- 199
I G A LL M + + L+L+
Sbjct: 508 IDGLFRTGRAGQAEALLDAMPDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDK 567
Query: 200 -TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
TFN L+ G G F A ++E MV N++P+V ++ A +DGL Q + A +++
Sbjct: 568 VTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDL 627
Query: 259 MRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGD 315
M + + P+V T+ AL+ G G +EEA ++ + SGC + + LV +C
Sbjct: 628 MGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASR 687
Query: 316 LDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA----KELVELGKTNSYCRYN 370
D A L S D ++VD L K + E+A +E+V G YN
Sbjct: 688 TDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYN 746
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 161/357 (45%), Gaps = 13/357 (3%)
Query: 25 GSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQK 84
G++I G+ K ++ D +LG N Y V L + R + LE
Sbjct: 606 GALIDGLCKAGQVEAARDILDLMGNLG-VPPNVVTYNALVHGLCKSGRIEEACQFLEEMV 664
Query: 85 QYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
+ L+ +A+ ++A ++ E+ + +++N L+ S + +
Sbjct: 665 SSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTE 724
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRL---DLITF 201
+ + +++ K G PD+V+YNT+I + G L+ A L +M + R +++T+
Sbjct: 725 QAITVLEEMVGK-GHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTY 783
Query: 202 NTLLLGFYSNGRFADAEKIWETMV--NMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
+ L+ G GR +A ++ + M+ + +V PN+ +YN+ LDGL + +A EL+ +
Sbjct: 784 SVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSL 843
Query: 260 R--SKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCG---MNKAIFKLLVPFVCEKG 314
R S ++PD TF LI G G +EA ++ G N + +L+ +C+
Sbjct: 844 RDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTD 903
Query: 315 DLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKTNSYCRYNL 371
++ A + + + D ++VD K V+EA EL+ G + C N+
Sbjct: 904 KMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLH-GMASRGCTPNV 959
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 126/276 (45%), Gaps = 16/276 (5%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I G+ K N L ++ F++ + G + Y + L A ++ E ++
Sbjct: 221 TIINGLCKSNELGAGMELFEELVERGH-HPDVVTYNTLIDSLCKAG------DLEEARRL 273
Query: 86 YKDISKEGFTAR------LIALYGKAAMFENARKVFDEMPGRNCE--QTVLSFNALL-GA 136
+ D+S LI K + AR++ EM ++C+ ++++N+ L G
Sbjct: 274 HGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGL 333
Query: 137 CVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRL 196
C S + + + L + PD V+++T+I G +D A ++ +M G
Sbjct: 334 CKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVP 393
Query: 197 DLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELV 256
++IT+N L+ G + A + E+MV+ V P+V +Y+ +D + +ALEL+
Sbjct: 394 NVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELL 453
Query: 257 GEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN 292
M S+ P+V TF ++I G EA + ++
Sbjct: 454 HGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFD 489
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 117/268 (43%), Gaps = 26/268 (9%)
Query: 104 KAAMFENARKVFDEMPGRNCE--QTVLSFNALLGACVNSKKFDEVDGLFKDL-PHKLGIE 160
K + AR++ EM ++C+ ++++N+ L E L + L L +
Sbjct: 792 KVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVS 851
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
PD V+++T+I G D A + +M G +++T+N L+ G + A +
Sbjct: 852 PDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAM 911
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
E+MV+ V P+V +Y+ +D +ALEL+ M S+ P+V TF ++I G
Sbjct: 912 IESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCK 971
Query: 281 EGNLEEAKRWYN----KSGCGMNKAIFKLLVPFVCEKG-------------DLD-FAFNL 322
EA + ++ K G +K + L+ + G D D +AFN
Sbjct: 972 SDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPDPDTYAFNC 1031
Query: 323 CKRTFSE-----RCLVDQAPLQLVVDRL 345
C S+ R L L+LV D++
Sbjct: 1032 CINGLSKLGDVSRALHRMLELELVPDKV 1059
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 110/256 (42%), Gaps = 43/256 (16%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLL----------- 206
G+ P +V+YNTII L + L E+ ++G D++T+NTL+
Sbjct: 211 GVAPTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEA 270
Query: 207 ------------------------GFYSNGRFADAEKIWETMV--NMNVRPNVRSYNARL 240
G GR +A ++ + M + +V PN+ +YN+ L
Sbjct: 271 RRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFL 330
Query: 241 DGLAIEKQTKKALELVGEMR--SKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCG- 297
DGL + T +A EL+ +R S ++PD TF LI G G ++EA ++ G
Sbjct: 331 DGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGG 390
Query: 298 --MNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAK 355
N + LV +C+ ++ A + + + D ++VD K RV+EA
Sbjct: 391 YVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEAL 450
Query: 356 ELVELGKTNSYCRYNL 371
EL+ G + C N+
Sbjct: 451 ELLH-GMASRGCTPNV 465
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 100/236 (42%), Gaps = 9/236 (3%)
Query: 51 GRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFT-ARLIALYGKAAMFE 109
G + N Y + L + ++E K ++ + T + L+ + KA+ +
Sbjct: 883 GGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVD-KGVTPDVITYSVLVDAFCKASHVD 941
Query: 110 NARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTI 169
A ++ M R C V++FN+++ S + E +F D+ K G+ PD ++Y T+
Sbjct: 942 EALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTL 1001
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
I G A LL M D FN + G + D + M+ + +
Sbjct: 1002 IDGLFRTGWAGQAEVLLDAMPDP----DTYAFNCCINGL---SKLGDVSRALHRMLELEL 1054
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLE 285
P+ ++N + G ++A L EM +K + PDV TF ALI G G +E
Sbjct: 1055 VPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVE 1110
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 124/287 (43%), Gaps = 44/287 (15%)
Query: 76 IEEILEHQKQYKD----ISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSF 130
+ E E + +D +S + T + LI K + A VFD+M V+++
Sbjct: 833 MAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTY 892
Query: 131 NALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEME 190
N L+ + K + + + + K G+ PD+++Y+ ++ AF +D A LL+ M
Sbjct: 893 NVLMNGLCKTDKMERAHAMIESMVDK-GVTPDVITYSVLVDAFCKASHVDEALELLHGMA 951
Query: 191 KKGIRLDLITFNTLLLGFYSNGRFADA---------------EKI-------------W- 221
+G +++TFN+++ G + + +A +KI W
Sbjct: 952 SRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWA 1011
Query: 222 ---ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGF 278
E +++ P+ ++N ++GL+ +AL + E+ E+ PD TF LI G
Sbjct: 1012 GQAEVLLDAMPDPDTYAFNCCINGLSKLGDVSRALHRMLEL---ELVPDKVTFNILIAGA 1068
Query: 279 VNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
GN E+A + + + F L+ +C+ G ++ +++
Sbjct: 1069 CKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEATWDI 1115
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 118/306 (38%), Gaps = 51/306 (16%)
Query: 104 KAAMFENARKVFDEM----PGRNCEQTVLSFNALLGACVNSKKFDEVDG------LFKDL 153
K + E+ R + + + PG++ + L V + ++DG F D
Sbjct: 41 KPLLAEDPRSISEALESLRPGQSVVAALRGCKGRLHPSVAAAILAQLDGNAELGTQFYDW 100
Query: 154 PHKL-GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL------- 205
L G + + S+N + V GS A L R + T++TLL
Sbjct: 101 AAALPGFKHTIFSFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAG 160
Query: 206 ------LGFYSN---------------------GRFADAEKIWE-TMVNMNVRPNVRSYN 237
LGF+ G A A +I+ M V P + +YN
Sbjct: 161 GDVERTLGFFRRIRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYN 220
Query: 238 ARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY---NKS 294
++GL + +EL E+ + +PDV T+ LI G+LEEA+R + +
Sbjct: 221 TIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSR 280
Query: 295 GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERC--LVDQAPLQLVVDRLAKELRVE 352
C N + +L+ +C+ G +D A L + + C L + +D L K+
Sbjct: 281 SCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTA 340
Query: 353 EAKELV 358
EA EL+
Sbjct: 341 EACELM 346
>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
Length = 569
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 141/315 (44%), Gaps = 20/315 (6%)
Query: 56 NTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIAL------YGKAAMFE 109
N Y+ V L +R +L ++++ GFT ++ KA
Sbjct: 218 NAITYSALVDGLCKCERLDEAVALL-----LGEVTRRGFTPDIVTYSTVIDGLCKAGRLR 272
Query: 110 NARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTI 169
+A +F+EM +C T +++N+L+G + DE L + PD+++Y T+
Sbjct: 273 DAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDD-NCAPDVITYTTL 328
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
+ AF G LD A L +M + D++TF +L+ G GR DA ++ E +
Sbjct: 329 MSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGC 388
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
P + +YN +DG Q +KA ELV + RS+ P+ T+ L+ G G ++A +
Sbjct: 389 PPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQ 448
Query: 290 WYNK-----SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDR 344
+ ++ C + A++ +++ +C G D A + + A VV
Sbjct: 449 YLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFA 508
Query: 345 LAKELRVEEAKELVE 359
L K + ++A EL+E
Sbjct: 509 LCKAHQPQQAHELLE 523
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 110/265 (41%), Gaps = 7/265 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL--PH 155
LI KA + + A + +M R L N ++G + + G+++ + H
Sbjct: 86 LIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAH 145
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
PD ++Y ++ G L A +L EM D T ++ R
Sbjct: 146 P----PDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVD 201
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLA-IEKQTKKALELVGEMRSKEINPDVFTFYAL 274
DA ++ E M++ + N +Y+A +DGL E+ + L+GE+ + PD+ T+ +
Sbjct: 202 DARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTV 261
Query: 275 IKGFVNEGNLEEAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
I G G L +A + + C + L+ C GD+D A L + + C D
Sbjct: 262 IDGLCKAGRLRDAVDIFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPD 321
Query: 335 QAPLQLVVDRLAKELRVEEAKELVE 359
++ K R+++A EL +
Sbjct: 322 VITYTTLMSAFCKMGRLDDAYELFQ 346
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 100/269 (37%), Gaps = 39/269 (14%)
Query: 129 SFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGS---------- 178
+F +L S K + L D G+ PD V NTI+ D
Sbjct: 12 TFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDARDTTTAMALFDK 71
Query: 179 ------------------------LDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRF 214
LD A LL +M+ +G+ + N ++ G GR
Sbjct: 72 MAELGAVNHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRL 131
Query: 215 ADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYAL 274
A ++ M + + P+ +Y + GL+ + + A++++ EM S PD T +
Sbjct: 132 RHALGVYRQMNDAH-PPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVV 190
Query: 275 IKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERC 331
++ +++A+ + G N + LV +C+ LD A L + R
Sbjct: 191 VQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRG 250
Query: 332 LV-DQAPLQLVVDRLAKELRVEEAKELVE 359
D V+D L K R+ +A ++ E
Sbjct: 251 FTPDIVTYSTVIDGLCKAGRLRDAVDIFE 279
>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900 [Vitis vinifera]
Length = 900
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 159/348 (45%), Gaps = 10/348 (2%)
Query: 28 IRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYK 87
IRG+ K + V+ K R + G Y V L + F EE++ ++
Sbjct: 257 IRGLCKNQRVWEAVE-IKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFG 315
Query: 88 DISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVD 147
+ E + L+ K +A + +++ ++ +NAL+ + K DE +
Sbjct: 316 FVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAE 375
Query: 148 GLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLG 207
LF ++ HK G+ P+ V+Y+ +I +F +G LD A L +M + GI+ + +++L+ G
Sbjct: 376 SLFNNMGHK-GLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISG 434
Query: 208 FYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPD 267
G+ A+ +++ M+ ++PNV Y + + G E + A L EM K I+P+
Sbjct: 435 HCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPN 494
Query: 268 VFTFYALIKGFVNEGNLEEAKRWYNKS---GCGMNKAIFKLLVPFVCEKGDLDFAFNLCK 324
+TF ALI G + + EA + + + N+ + +L+ C++G+ AF L
Sbjct: 495 TYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLD 554
Query: 325 RTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV-----ELGKTNSYC 367
+ + D + ++ L RV EA+E + E K N C
Sbjct: 555 EMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMC 602
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 153/342 (44%), Gaps = 8/342 (2%)
Query: 24 IGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQ 83
+ +++ G+ K+ N+ D K G + +Y + + + E + +
Sbjct: 323 VSNLVDGLRKKGNIGSAFDLVNKVKKFG-VAPSLFVYNALINSMCKDGKLDEAESLFNNM 381
Query: 84 KQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKF 143
+ + LI + K + A +M + TV +++L+ K
Sbjct: 382 GHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKL 441
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT 203
LF ++ G++P++V Y ++I + +G L +A L +EM KGI + TF
Sbjct: 442 RAAKSLFDEMIAN-GLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTA 500
Query: 204 LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
L+ G R A+A K++ MV NV PN +YN ++G E T +A EL+ EM K
Sbjct: 501 LISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKG 560
Query: 264 INPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAF 320
+ PD +T+ LI G + G + EA+ + N +N+ F L+ C++G LD A
Sbjct: 561 LVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDAL 620
Query: 321 NLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGK 362
+ C+ +D +++ + LR ++ + +++L K
Sbjct: 621 DACREMLGRGVAMDLVCYSVLIYGI---LRQQDRRSIIDLLK 659
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 128/298 (42%), Gaps = 39/298 (13%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI+ Y K NA +++ EM G+ +F AL+ ++ + E + LF ++ +
Sbjct: 466 LISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMV-EW 524
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGI----------------------- 194
+ P+ V+YN +I+ +G+ A LL EM +KG+
Sbjct: 525 NVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEA 584
Query: 195 ------------RLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDG 242
+L+ + F+ LL G+ GR DA M+ V ++ Y+ + G
Sbjct: 585 REFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYG 644
Query: 243 LAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMN 299
+ ++ + ++L+ +M + + PD + +I GNL+ A ++ GC N
Sbjct: 645 ILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPN 704
Query: 300 KAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
+ L+ +C+ G +D A LC+ + L +Q +D L E +E+A +L
Sbjct: 705 VVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQL 762
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 116/254 (45%), Gaps = 9/254 (3%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRW---IEEILEHQ 83
+I GI ++ + + ++D K+ D G R + +YT + A A + + +I+ +
Sbjct: 641 LIYGILRQQDRRSIIDLLKQMHDQG-LRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSE 699
Query: 84 KQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKF 143
++ +TA LI K + + A + EM N ++ L +
Sbjct: 700 GCLPNVVT--YTA-LINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNI 756
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT 203
++ L L G + V+YN +I+ F G + A +L M GI D I+++T
Sbjct: 757 EKAIQLHDVLLE--GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYST 814
Query: 204 LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
++ + G +A K+WE+M+N V P+ +YN + G + + KA EL +M +
Sbjct: 815 IIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRG 874
Query: 264 INPDVFTFYALIKG 277
+ P+ T+ +LI G
Sbjct: 875 VKPNRATYNSLIHG 888
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 121/271 (44%), Gaps = 15/271 (5%)
Query: 70 AKRFRWIEEILEHQKQYKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVL 128
+ F ++E++E K + + +T R LI+ AR+ +++ G + +
Sbjct: 547 VRAFELLDEMVE-----KGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEM 601
Query: 129 SFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLY 187
F+ALL G C + D +D + L G+ DLV Y+ +I + + S LL
Sbjct: 602 CFSALLHGYCKEGRLDDALDACREMLGR--GVAMDLVCYSVLIYGILRQQDRRSIIDLLK 659
Query: 188 EMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEK 247
+M +G+R D + + T++ G A +W+ MV+ PNV +Y A ++GL
Sbjct: 660 QMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIG 719
Query: 248 QTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK--SGCGMNKAIFKL 305
KA L EM + P+ T+ + +EGN+E+A + ++ G N + +
Sbjct: 720 LMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNI 779
Query: 306 LVPFVCEKGDLDFA----FNLCKRTFSERCL 332
L+ C+ G + A N+ S C+
Sbjct: 780 LIRGFCKLGRIQEAAEVLVNMIDSGISPDCI 810
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 97/217 (44%), Gaps = 4/217 (1%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
F A +FDE+ V + A++ + K F + + G + + +YN
Sbjct: 196 FRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESS-GCDLSVATYN 254
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
I+ + A + + KG+R D+ T+ TL+LG F E++ M+
Sbjct: 255 VFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEF 314
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
P+ + + +DGL + A +LV +++ + P +F + ALI +G L+EA
Sbjct: 315 GFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEA 374
Query: 288 KRWYNKSGC-GM--NKAIFKLLVPFVCEKGDLDFAFN 321
+ +N G G+ N + +L+ C++G LD A +
Sbjct: 375 ESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALH 411
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
GI PD +SY+TII + +G L A L M +G+ D + +N L+ G G A
Sbjct: 804 GISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKA 863
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAI 245
++ + M+ V+PN +YN+ + G +
Sbjct: 864 FELRDDMMRRGVKPNRATYNSLIHGTCL 891
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 58/117 (49%), Gaps = 3/117 (2%)
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
+ F+ L+ + N R D + M++ + P +R+ + L+GL +Q + AL L E
Sbjct: 146 LGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDE 205
Query: 259 MRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCE 312
+ S + PDV+ + A+++ + A+ + SGC ++ A + + + +C+
Sbjct: 206 IVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCK 262
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 145/314 (46%), Gaps = 6/314 (1%)
Query: 64 VQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNC 123
++ L A + R +LE + E L+ + + E A +V +M C
Sbjct: 202 IKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGC 261
Query: 124 EQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSA 182
T ++ N L+ G C + D + + K++ G EPD V+YNT + G + A
Sbjct: 262 SPTRVTVNVLINGYCKMGRVEDALGYIQKEIAD--GFEPDQVTYNTFVHCLCQNGHVSHA 319
Query: 183 NTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDG 242
++ M ++G D+ T+NT++ NG +A+ I MV+ P+ ++N +
Sbjct: 320 LKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVA 379
Query: 243 LAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMN 299
L + + ++AL+L E+ K ++PDV+TF LI G+ R + + SGC +
Sbjct: 380 LCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPD 439
Query: 300 KAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ + +L+ +C G L A +L K S C ++D L K++R+EEA+E+ +
Sbjct: 440 EVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFD 499
Query: 360 LGKTNSYCRYNLKF 373
+ R + F
Sbjct: 500 QMDAHGISRSAVTF 513
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 85/179 (47%), Gaps = 1/179 (0%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K E A +VFD+M ++ ++FN L+ +K+ D+ L + + K G++P
Sbjct: 487 KQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMV-KEGLQPSN 545
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
++YN+I+ + +G L A +L M G +D++T+ TL+ G GR A K+
Sbjct: 546 ITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRG 605
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEG 282
M +RP ++YN + L + AL L EM PD T+ + +G G
Sbjct: 606 MRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGG 664
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 111/264 (42%), Gaps = 37/264 (14%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE---------VDG 148
+I K + A+ + ++M R C +FN L+ A + + +E V G
Sbjct: 341 VINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKG 400
Query: 149 LFKDL---------------PH----------KLGIEPDLVSYNTIIKAFVDKGSLDSAN 183
L D+ PH G PD V+YN +I G L +A
Sbjct: 401 LSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNAL 460
Query: 184 TLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
LL EME G +T+NT++ R +AE++++ M + + ++N +DGL
Sbjct: 461 DLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGL 520
Query: 244 AIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK---RWYNKSGCGMNK 300
K+ A EL+ +M + + P T+ +++ + +G+L++A +G ++
Sbjct: 521 CKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDV 580
Query: 301 AIFKLLVPFVCEKGDLDFAFNLCK 324
+ L+ +C+ G A L +
Sbjct: 581 VTYGTLINGLCKAGRTQVALKLLR 604
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 109/264 (41%), Gaps = 3/264 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I G A F+ + EM E + + + ++FD+ L ++ +
Sbjct: 95 IIQKLGTAGAFDLMEGLVREMRREGHEAGAGVVRSFVESYARLRRFDDAVDLVRNQLNTF 154
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++ D YN ++ + + ++ EM +GI+ D++T NTL+ + A
Sbjct: 155 GVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTA 214
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ E M + V P+ ++ + G E + AL + +M +P T LI G
Sbjct: 215 VLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLING 274
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
+ G +E+A + K G ++ + V +C+ G + A + E D
Sbjct: 275 YCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPD 334
Query: 335 QAPLQLVVDRLAKELRVEEAKELV 358
V++ L+K ++EAK +V
Sbjct: 335 VFTYNTVINCLSKNGELDEAKGIV 358
>gi|297746144|emb|CBI16200.3| unnamed protein product [Vitis vinifera]
Length = 1093
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 141/312 (45%), Gaps = 40/312 (12%)
Query: 44 FKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYG 103
F + +G F+ + Y+ V +LA ++ F +E +L++ + +E LI YG
Sbjct: 472 FNQYQQMG-FKHDYPSYSALVYKLARSRNFEAVETLLDYLQNINIRCRETLFIALIQHYG 530
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K+ M E A ++F MP NC +T++SFN LL V + +F + G+F D K+G +
Sbjct: 531 KSQMPEKAVELFQRMPSFNCHRTLVSFNTLLNVLVENDRFLDAIGIF-DRSTKMGFRRNS 589
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
+S+N IIK ++ KG D A + EM K ++ ++TFN+L+ G A + E
Sbjct: 590 ISFNIIIKGWLGKGEWDKAWQVFEEMIDKEVKPTVVTFNSLIGFLCGKGDLDGAMGLLED 649
Query: 224 MVNMNVRPNVRSYNARLDGLAI---EKQTKKAL--------------------------- 253
M+ RPN +Y ++GL K+ KK +
Sbjct: 650 MIQKRHRPNAVTYALLMEGLCSLGKYKEAKKMMFDMDYQGCKPRLLNFGVLMSDLGRRGR 709
Query: 254 -----ELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW---YNKSGCGMNKAIFKL 305
L+ EM+ + PDV T+ LI EG EA + GC N A +++
Sbjct: 710 IDDSKTLLLEMKRRRFKPDVVTYNILINHLCKEGRALEAYKVLVEMQVGGCEPNAATYRM 769
Query: 306 LVPFVCEKGDLD 317
+V C+ D +
Sbjct: 770 MVDGFCQVEDFE 781
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 92/214 (42%), Gaps = 34/214 (15%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHK----------- 156
++ A +VF+EM + + TV++FN+L+G D GL +D+ K
Sbjct: 605 WDKAWQVFEEMIDKEVKPTVVTFNSLIGFLCGKGDLDGAMGLLEDMIQKRHRPNAVTYAL 664
Query: 157 -----------------------LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKG 193
G +P L+++ ++ +G +D + TLL EM+++
Sbjct: 665 LMEGLCSLGKYKEAKKMMFDMDYQGCKPRLLNFGVLMSDLGRRGRIDDSKTLLLEMKRRR 724
Query: 194 IRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKAL 253
+ D++T+N L+ GR +A K+ M PN +Y +DG + + L
Sbjct: 725 FKPDVVTYNILINHLCKEGRALEAYKVLVEMQVGGCEPNAATYRMMVDGFCQVEDFEGGL 784
Query: 254 ELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+++ M P + +F L+ G + G ++ A
Sbjct: 785 KVLSAMLMCGHCPRLESFCDLVVGLLKNGKIDGA 818
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 77/169 (45%), Gaps = 1/169 (0%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
++ A+K+ +M + C+ +L+F L+ + D+ L ++ + +PD+V+YN
Sbjct: 675 YKEAKKMMFDMDYQGCKPRLLNFGVLMSDLGRRGRIDDSKTLLLEMKRRR-FKPDVVTYN 733
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
+I +G A +L EM+ G + T+ ++ GF F K+ M+
Sbjct: 734 ILINHLCKEGRALEAYKVLVEMQVGGCEPNAATYRMMVDGFCQVEDFEGGLKVLSAMLMC 793
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
P + S+ + GL + A ++ EM +++ + + AL+K
Sbjct: 794 GHCPRLESFCDLVVGLLKNGKIDGACFVLEEMEKRKMRFHLEAWEALVK 842
>gi|297826581|ref|XP_002881173.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327012|gb|EFH57432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 917
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 128/262 (48%), Gaps = 4/262 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+A+ + ++E AR +FDEM R EQ V S+N LL A + D + +P K
Sbjct: 345 LLAVCSRGGLWEAARNLFDEMSNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPAKR 404
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
I P++VSY+T+I F G D A L EM I LD +++NTLL + GR +A
Sbjct: 405 -IMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLNIALDRVSYNTLLSIYTKVGRSEEA 463
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
I M ++ ++ +V +YNA L G + + + ++ EM+ + + P++ T+ LI G
Sbjct: 464 LDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDG 523
Query: 278 FVNEGNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
+ G +EA R + +G + ++ L+ +C+ G + A +L E +
Sbjct: 524 YSKGGLYKEAMEVFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPN 583
Query: 335 QAPLQLVVDRLAKELRVEEAKE 356
++D + +E + +
Sbjct: 584 VVTYNSIIDAFGRSATMERSAD 605
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 108/194 (55%), Gaps = 4/194 (2%)
Query: 98 LIALYGKAAM-FENARKVFDEMPGRNCEQT-VLSFNALLGACVNSKKFDEVDGLFKDLPH 155
+I GK M F+ K FDEM RNC Q ++FN+LL C ++ LF ++ +
Sbjct: 309 VIDACGKGGMEFKQVAKFFDEMQ-RNCVQPDRITFNSLLAVCSRGGLWEAARNLFDEMSN 367
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
+ IE D+ SYNT++ A G +D A +L +M K I ++++++T++ GF GRF
Sbjct: 368 RR-IEQDVFSYNTLLDAICKGGQMDLAFEILAQMPAKRIMPNVVSYSTVIDGFAKAGRFD 426
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
+A ++ M +N+ + SYN L ++++AL+++ EM S I DV T+ AL+
Sbjct: 427 EALNLFGEMRYLNIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALL 486
Query: 276 KGFVNEGNLEEAKR 289
G+ +G +E K+
Sbjct: 487 GGYGKQGKYDEVKK 500
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 99/196 (50%), Gaps = 3/196 (1%)
Query: 93 GFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGAC-VNSKKFDEVDGLFK 151
F+A LI+ YG++ + E A VF+ M ++++NA++ AC +F +V F
Sbjct: 270 AFSA-LISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFD 328
Query: 152 DLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSN 211
++ ++PD +++N+++ G ++A L EM + I D+ ++NTLL
Sbjct: 329 EMQRNC-VQPDRITFNSLLAVCSRGGLWEAARNLFDEMSNRRIEQDVFSYNTLLDAICKG 387
Query: 212 GRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTF 271
G+ A +I M + PNV SY+ +DG A + +AL L GEMR I D ++
Sbjct: 388 GQMDLAFEILAQMPAKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLNIALDRVSY 447
Query: 272 YALIKGFVNEGNLEEA 287
L+ + G EEA
Sbjct: 448 NTLLSIYTKVGRSEEA 463
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 99/196 (50%), Gaps = 4/196 (2%)
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
+ +I+ G+ A+++F+ TV +F+AL+ A S +E +F +
Sbjct: 235 LASAMISTLGRYGKVTIAKRIFETAFSGGYGNTVYAFSALISAYGRSGLHEEAISVFNSM 294
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLY--EMEKKGIRLDLITFNTLLLGFYSN 211
+ G+ P+LV+YN +I A KG ++ + EM++ ++ D ITFN+LL
Sbjct: 295 -KEYGLRPNLVTYNAVIDA-CGKGGMEFKQVAKFFDEMQRNCVQPDRITFNSLLAVCSRG 352
Query: 212 GRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTF 271
G + A +++ M N + +V SYN LD + Q A E++ +M +K I P+V ++
Sbjct: 353 GLWEAARNLFDEMSNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPAKRIMPNVVSY 412
Query: 272 YALIKGFVNEGNLEEA 287
+I GF G +EA
Sbjct: 413 STVIDGFAKAGRFDEA 428
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 101/195 (51%), Gaps = 1/195 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I + KA F+ A +F EM N +S+N LL + +E + +++ +
Sbjct: 415 VIDGFAKAGRFDEALNLFGEMRYLNIALDRVSYNTLLSIYTKVGRSEEALDILREMA-SV 473
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
GI+ D+V+YN ++ + +G D + EM+++ + +L+T++TL+ G+ G + +A
Sbjct: 474 GIKKDVVTYNALLGGYGKQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSKGGLYKEA 533
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+++ + +R +V Y+A +D L A+ L+ EM + I+P+V T+ ++I
Sbjct: 534 MEVFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDA 593
Query: 278 FVNEGNLEEAKRWYN 292
F +E + + N
Sbjct: 594 FGRSATMERSADYSN 608
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 120/295 (40%), Gaps = 63/295 (21%)
Query: 52 RFRTNTGIYTGTVQRLANAKRFRWIEEILE--HQKQYKDISKEGFTAR-LIALYGKAAMF 108
R N Y+ + A A RF +E L + +Y +I+ + + L+++Y K
Sbjct: 404 RIMPNVVSYSTVIDGFAKAGRF---DEALNLFGEMRYLNIALDRVSYNTLLSIYTKVGRS 460
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
E A + EM ++ V+++NALLG K+DEV +F ++ + + P+L++Y+T
Sbjct: 461 EEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFAEMKRE-HVLPNLLTYST 519
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
+I + G A + E + G+R D++ ++ L+ NG A + + M
Sbjct: 520 LIDGYSKGGLYKEAMEVFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEG 579
Query: 229 VRPNVRSYNARLDGLA---------------------------IEKQTKKALELVGEMRS 261
+ PNV +YN+ +D E + + ++L G++ S
Sbjct: 580 ISPNVVTYNSIIDAFGRSATMERSADYSNGGSLPFSSSALSELTETEGNRVIQLFGQLTS 639
Query: 262 K-----------------------------EINPDVFTFYALIKGFVNEGNLEEA 287
+ EI P+V TF A++ + E+A
Sbjct: 640 EGNNRMTKDCKEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDA 694
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 78/162 (48%), Gaps = 6/162 (3%)
Query: 201 FNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEK-QTKKALELVGEM 259
F+ L+ + +G +A ++ +M +RPN+ +YNA +D + K+ + EM
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEM 330
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLEEAKR--WYNKSGCGMNKAIFK--LLVPFVCEKGD 315
+ + PD TF +L+ + G L EA R + S + + +F L+ +C+ G
Sbjct: 331 QRNCVQPDRITFNSLL-AVCSRGGLWEAARNLFDEMSNRRIEQDVFSYNTLLDAICKGGQ 389
Query: 316 LDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
+D AF + + ++R + + V+D AK R +EA L
Sbjct: 390 MDLAFEILAQMPAKRIMPNVVSYSTVIDGFAKAGRFDEALNL 431
>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
Length = 528
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 132/283 (46%), Gaps = 15/283 (5%)
Query: 88 DISKEGFTARLIAL------YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSK 141
++++ GFT ++ KA +A +F+EM +C T +++N+L+G +
Sbjct: 204 EVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAG 260
Query: 142 KFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITF 201
DE L + PD+V+Y T++ AF G LD A L +M + D++TF
Sbjct: 261 DMDEAIRLLGKMVDD-KCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTF 319
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS 261
+L+ G GR DA ++ E + P + +YN +DG Q +KA ELV + RS
Sbjct: 320 TSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRS 379
Query: 262 KEINPDVFTFYALIKGFVNEGNLEEAKRWYNK-----SGCGMNKAIFKLLVPFVCEKGDL 316
+ P+ T+ L+ G G ++A ++ ++ C + A++ +++ +C G
Sbjct: 380 RGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRT 439
Query: 317 DFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
D A + + A VV L K + ++A EL+E
Sbjct: 440 DDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLE 482
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 141/333 (42%), Gaps = 38/333 (11%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
VI G+ + L+ + +++ +D + YT V L+ A+R R ++L+
Sbjct: 11 VIGGLCRAGRLRHALGVYRQMNDA--HPPDFLTYTKLVHGLSKARRLRDAVQVLQE---- 64
Query: 87 KDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEV 146
+AR V D N TV+ + LG + D+
Sbjct: 65 ---------------------MVSARHVPD-----NTTLTVVVQSLCLG-----DRVDDA 93
Query: 147 DGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLL 206
L +++ H+ G+ + ++Y+ ++ LD A L+ M ++G ++T+N+++
Sbjct: 94 RELVEEMLHR-GMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIIT 152
Query: 207 GFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINP 266
GF R +A E MV P++ +Y A + G + + LEL+GE+ + P
Sbjct: 153 GFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTP 212
Query: 267 DVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRT 326
D+ T+ +I G G L +A + + C + L+ C GD+D A L +
Sbjct: 213 DIVTYSTVIDGLCKAGRLRDAVDIFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKM 272
Query: 327 FSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
++C D ++ K R+++A EL +
Sbjct: 273 VDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQ 305
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 102/241 (42%), Gaps = 17/241 (7%)
Query: 128 LSFNALLGACVNSKKFDEVDGLFKDL--PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTL 185
L N ++G + + G+++ + H PD ++Y ++ L A +
Sbjct: 6 LLHNVVIGGLCRAGRLRHALGVYRQMNDAHP----PDFLTYTKLVHGLSKARRLRDAVQV 61
Query: 186 LYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAI 245
L EM D T ++ R DA ++ E M++ + N +Y+A +DGL
Sbjct: 62 LQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCK 121
Query: 246 EKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAI 302
++ +A+ LV M + P V T+ ++I GF ++EA + + GC +
Sbjct: 122 CERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIIT 181
Query: 303 FKLLVPFVCEKGD----LDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
+ L+ C+ D L+ + +R F+ D V+D L K R+ +A ++
Sbjct: 182 YTALIGGFCKSRDVGRGLELLGEVTRRGFTP----DIVTYSTVIDGLCKAGRLRDAVDIF 237
Query: 359 E 359
E
Sbjct: 238 E 238
>gi|15224671|ref|NP_180698.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
gi|75206083|sp|Q9SIC9.1|PP178_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g31400, chloroplastic; Flags: Precursor
gi|4589961|gb|AAD26479.1| unknown protein [Arabidopsis thaliana]
gi|330253448|gb|AEC08542.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
Length = 918
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 129/262 (49%), Gaps = 4/262 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+A+ + ++E AR +FDEM R EQ V S+N LL A + D + +P K
Sbjct: 345 LLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKR 404
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
I P++VSY+T+I F G D A L EM GI LD +++NTLL + GR +A
Sbjct: 405 -IMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEA 463
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
I M ++ ++ +V +YNA L G + + + ++ EM+ + + P++ T+ LI G
Sbjct: 464 LDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDG 523
Query: 278 FVNEGNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
+ G +EA R + +G + ++ L+ +C+ G + A +L E +
Sbjct: 524 YSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPN 583
Query: 335 QAPLQLVVDRLAKELRVEEAKE 356
++D + ++ + +
Sbjct: 584 VVTYNSIIDAFGRSATMDRSAD 605
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 127/269 (47%), Gaps = 7/269 (2%)
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
+ +I+ G+ A+++F+ TV +F+AL+ A S +E +F +
Sbjct: 235 LASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSM 294
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLY--EMEKKGIRLDLITFNTLLLGFYSN 211
+ G+ P+LV+YN +I A KG ++ + EM++ G++ D ITFN+LL
Sbjct: 295 -KEYGLRPNLVTYNAVIDA-CGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRG 352
Query: 212 GRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTF 271
G + A +++ M N + +V SYN LD + Q A E++ +M K I P+V ++
Sbjct: 353 GLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSY 412
Query: 272 YALIKGFVNEGNLEEAKRWYNKS---GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFS 328
+I GF G +EA + + G +++ + L+ + G + A ++ + S
Sbjct: 413 STVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMAS 472
Query: 329 ERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
D ++ K+ + +E K++
Sbjct: 473 VGIKKDVVTYNALLGGYGKQGKYDEVKKV 501
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 100/195 (51%), Gaps = 1/195 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I + KA F+ A +F EM +S+N LL + +E + +++ +
Sbjct: 415 VIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMA-SV 473
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
GI+ D+V+YN ++ + +G D + EM+++ + +L+T++TL+ G+ G + +A
Sbjct: 474 GIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEA 533
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+I+ + +R +V Y+A +D L A+ L+ EM + I+P+V T+ ++I
Sbjct: 534 MEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDA 593
Query: 278 FVNEGNLEEAKRWYN 292
F ++ + + N
Sbjct: 594 FGRSATMDRSADYSN 608
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 117/295 (39%), Gaps = 63/295 (21%)
Query: 52 RFRTNTGIYTGTVQRLANAKRFRWIEEILE--HQKQYKDISKEGFTAR-LIALYGKAAMF 108
R N Y+ + A A RF +E L + +Y I+ + + L+++Y K
Sbjct: 404 RIMPNVVSYSTVIDGFAKAGRF---DEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRS 460
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
E A + EM ++ V+++NALLG K+DEV +F ++ + + P+L++Y+T
Sbjct: 461 EEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKRE-HVLPNLLTYST 519
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
+I + G A + E + G+R D++ ++ L+ NG A + + M
Sbjct: 520 LIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEG 579
Query: 229 VRPNVRSYNARLDGLA---------------------------IEKQTKKALELVGE--- 258
+ PNV +YN+ +D E + + ++L G+
Sbjct: 580 ISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTT 639
Query: 259 --------------------------MRSKEINPDVFTFYALIKGFVNEGNLEEA 287
M EI P+V TF A++ + E+A
Sbjct: 640 ESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDA 694
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 90/219 (41%), Gaps = 57/219 (26%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+ YGK ++ +KVF EM + +L+++ L+ + E +F++
Sbjct: 485 LLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREF-KSA 543
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF--------- 208
G+ D+V Y+ +I A G + SA +L+ EM K+GI +++T+N+++ F
Sbjct: 544 GLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRS 603
Query: 209 --YSNG-----------------------------------RFADAEK----------IW 221
YSNG D E+ ++
Sbjct: 604 ADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVF 663
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMR 260
M + ++PNV +++A L+ + + A L+ E+R
Sbjct: 664 RKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELR 702
>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
Length = 645
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 126/271 (46%), Gaps = 6/271 (2%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
+A+ F A V ++ GR C V + N +L A + DE L +DL G EPD+
Sbjct: 158 RASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDV 217
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
VSYN +++ L+ EM G +++TF+TL+ NG F ++
Sbjct: 218 VSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQ 277
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M P+VR Y +DG+ E++ + A ++ M S ++P+V + L+KG +
Sbjct: 278 MAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADR 337
Query: 284 LEEAK----RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQ 339
EEA+ ++K C ++ F +LV F+C+ G +D + ++ C+ D
Sbjct: 338 WEEAEGLLAEMFDKD-CPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYT 396
Query: 340 LVVDRLAKELRVEEAKELVELGKTNSYCRYN 370
V++ KE ++EA L+ CR N
Sbjct: 397 TVINGFCKEGLIDEAVMLLR-SMAACGCRPN 426
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 134/310 (43%), Gaps = 16/310 (5%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMP 119
Y ++ L A+R+ +++++E + LI + +FE +V +M
Sbjct: 220 YNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMA 279
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL 179
C V + ++ ++ + G+ +P G+ P++V YNT++K
Sbjct: 280 EHGCAPDVRMYATIIDGVCKEERLEVARGILNRMP-SYGLSPNVVCYNTLLKGLCSADRW 338
Query: 180 DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNAR 239
+ A LL EM K LD +TFN L+ NG ++ E M+ P+V +Y
Sbjct: 339 EEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTV 398
Query: 240 LDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN------- 292
++G E +A+ L+ M + P+ ++ ++KG + A+RW +
Sbjct: 399 INGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCS------AERWVDAEELMSQ 452
Query: 293 --KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELR 350
+ GC N F L+ F+C+KG ++ A L K+ C D V+D L K
Sbjct: 453 MIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGN 512
Query: 351 VEEAKELVEL 360
+EA EL+ +
Sbjct: 513 TDEALELLNV 522
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/405 (21%), Positives = 161/405 (39%), Gaps = 73/405 (18%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
+V+RG+ + D ++ G N ++ + L F + E+ +
Sbjct: 222 AVLRGLCMARRWGHVQDLMEEMVAAG-CPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAE 280
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
+ A +I K E AR + + MP V+ +N LL ++ +++E
Sbjct: 281 HGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEE 340
Query: 146 VDGLF-----KDLPH-----------------------------KLGIEPDLVSYNTIIK 171
+GL KD P + G PD+++Y T+I
Sbjct: 341 AEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVIN 400
Query: 172 AFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRP 231
F +G +D A LL M G R + +++ +L G S R+ DAE++ M+ P
Sbjct: 401 GFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPP 460
Query: 232 NVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY 291
N ++N ++ L + ++A+EL+ +M +PD+ ++ +I G GN +EA
Sbjct: 461 NPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELL 520
Query: 292 NK--------------------SGCG-MNKAI-----------------FKLLVPFVCEK 313
N SG G +NK I + ++ +C++
Sbjct: 521 NVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKR 580
Query: 314 GDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
G+ D A S C+ +++ +++ LA E V+EA+E++
Sbjct: 581 GETDRAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEIL 625
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 103/237 (43%), Gaps = 2/237 (0%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
+VI G KE + V + + G R NT YT ++ L +A+R+ EE++ Q
Sbjct: 397 TVINGFCKEGLIDEAVMLLRSMAACG-CRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQ 455
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
LI K + E A ++ +M C ++S++ ++ + DE
Sbjct: 456 QGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDE 515
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
L + K G+ P+ + Y++I A +G ++ + ++ +R D + +N ++
Sbjct: 516 ALELLNVMVKK-GMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVI 574
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
G A + MV+ PN +Y + GLA E K+A E++ E+ SK
Sbjct: 575 SSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEILTELCSK 631
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 126/255 (49%), Gaps = 4/255 (1%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
FE A K+F M +N + ++N+ + ++ +E G+ L G+ P+ V+YN
Sbjct: 268 FEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLES-GLVPNAVTYN 326
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
+I +KG LD A EM +GI + T+N L+ + R +AE + + M
Sbjct: 327 ALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREK 386
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
V P+V +YN +++G KKAL L EM K I P V T+ +LI F + EA
Sbjct: 387 GVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEA 446
Query: 288 KRWYNKS---GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDR 344
+ + KS G + +F L+ C G++D AF L K + + + D+ ++
Sbjct: 447 EEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQG 506
Query: 345 LAKELRVEEAKELVE 359
+E +VEEAK+L++
Sbjct: 507 YCRERKVEEAKKLLD 521
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 112/210 (53%), Gaps = 4/210 (1%)
Query: 116 DEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVD 175
DEM R +V ++N L+ A K+ +E + + K++ K G+EPD+V+YN I +
Sbjct: 346 DEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREK-GVEPDVVTYNIQINGYCR 404
Query: 176 KGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRS 235
G+ A +L EM +K IR + T+ +L+ F R ++AE+ ++ + + P++
Sbjct: 405 CGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIM 464
Query: 236 YNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN--- 292
+NA +DG + +A +L+ EM + ++ PD TF L++G+ E +EEAK+ +
Sbjct: 465 FNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMK 524
Query: 293 KSGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
+ G + + L+ ++GD+ A +
Sbjct: 525 ERGIKPDHISYNTLISGYSKRGDMKDALEV 554
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 138/269 (51%), Gaps = 20/269 (7%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQ-----RLANAKR-FRWIEEIL 80
+I ++ E ++ D K+ + G + T +Q R NAK+ +E++
Sbjct: 363 LIHALFLEKRIEEAEDMIKEMREKG---VEPDVVTYNIQINGYCRCGNAKKALSLFDEMV 419
Query: 81 EHQKQYKDI--SKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GAC 137
E K+I + E +T+ LI ++GK A + F + ++ FNAL+ G C
Sbjct: 420 E-----KNIRPTVETYTS-LIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHC 473
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLD 197
VN D L K++ + + PD V++NT+++ + + ++ A LL EM+++GI+ D
Sbjct: 474 VNGN-IDRAFQLLKEMDNA-KVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPD 531
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
I++NTL+ G+ G DA ++++ M+++ P + +YNA + G + + A EL+
Sbjct: 532 HISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLR 591
Query: 258 EMRSKEINPDVFTFYALIKGFVNEGNLEE 286
EM+SK I PD T+ +I+ +L E
Sbjct: 592 EMQSKGITPDDSTYLYVIEAMKTNDDLVE 620
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 114/230 (49%), Gaps = 3/230 (1%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARL-IALYGKAAMFENARKVFDEM 118
Y + L KR E++++ ++ K + + T + I Y + + A +FDEM
Sbjct: 360 YNLLIHALFLEKRIEEAEDMIKEMRE-KGVEPDVVTYNIQINGYCRCGNAKKALSLFDEM 418
Query: 119 PGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGS 178
+N TV ++ +L+ + E + FK K G+ PD++ +N +I G+
Sbjct: 419 VEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKK-SIKEGMLPDIIMFNALIDGHCVNGN 477
Query: 179 LDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNA 238
+D A LL EM+ + D +TFNTL+ G+ + +A+K+ + M ++P+ SYN
Sbjct: 478 IDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNT 537
Query: 239 RLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
+ G + K ALE+ EM S +P + T+ ALI+G+ G + A+
Sbjct: 538 LISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAE 587
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 87/193 (45%), Gaps = 7/193 (3%)
Query: 188 EMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEK 247
EM K I+ ++TFN ++ G++ A+ M V+PNV +YN ++G +
Sbjct: 207 EMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRG 266
Query: 248 QTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFK 304
+ + A ++ M+ K + PD +T+ + I E +EEA K SG N +
Sbjct: 267 KFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYN 326
Query: 305 LLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA----KELVEL 360
L+ C KGDLD AF + + L++ L E R+EEA KE+ E
Sbjct: 327 ALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREK 386
Query: 361 GKTNSYCRYNLKF 373
G YN++
Sbjct: 387 GVEPDVVTYNIQI 399
>gi|147858028|emb|CAN80345.1| hypothetical protein VITISV_003133 [Vitis vinifera]
Length = 1051
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 140/312 (44%), Gaps = 40/312 (12%)
Query: 44 FKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYG 103
F + +G F+ + Y+ V +LA ++ F +E +L++ + +E LI YG
Sbjct: 401 FNQYQQMG-FKHDYPSYSALVYKLARSRNFEAVETLLDYLQNINIRCRETLFIALIQHYG 459
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K+ M E A ++F MP NC +T++SFN LL V +F + G+F D K+G +
Sbjct: 460 KSQMPEKAIELFQRMPSFNCHRTIVSFNTLLNVLVEIDRFLDAIGIF-DRSTKMGFRRNS 518
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
+S+N IIK ++ KG D A + EM K ++ ++TFN+L+ G A + Z
Sbjct: 519 ISFNIIIKGWLGKGEWDKAWQVFEEMIDKEVKPTVVTFNSLIGFLCGKGDLDGAMGLLZD 578
Query: 224 MVNMNVRPNVRSYNARLDGLAI---EKQTKKAL--------------------------- 253
M+ RPN +Y ++GL K+ KK +
Sbjct: 579 MIQKRHRPNAVTYALLMEGLCSLGKYKEAKKMMFDMDYQGCKPRLLNFGVLMSDLGRRGR 638
Query: 254 -----ELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW---YNKSGCGMNKAIFKL 305
L+ EM+ + PDV T+ LI EG EA + GC N A +++
Sbjct: 639 IDDXKTLLLEMKRRRFKPDVVTYNILINXLCKEGRAXEAYKVLVEMQVGGCEPNAATYRM 698
Query: 306 LVPFVCEKGDLD 317
+V C+ D +
Sbjct: 699 MVDGFCQVEDFE 710
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 91/214 (42%), Gaps = 34/214 (15%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHK----------- 156
++ A +VF+EM + + TV++FN+L+G D GL +D+ K
Sbjct: 534 WDKAWQVFEEMIDKEVKPTVVTFNSLIGFLCGKGDLDGAMGLLZDMIQKRHRPNAVTYAL 593
Query: 157 -----------------------LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKG 193
G +P L+++ ++ +G +D TLL EM+++
Sbjct: 594 LMEGLCSLGKYKEAKKMMFDMDYQGCKPRLLNFGVLMSDLGRRGRIDDXKTLLLEMKRRR 653
Query: 194 IRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKAL 253
+ D++T+N L+ GR +A K+ M PN +Y +DG + + L
Sbjct: 654 FKPDVVTYNILINXLCKEGRAXEAYKVLVEMQVGGCEPNAATYRMMVDGFCQVEDFEGGL 713
Query: 254 ELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+++ M P + +F L+ G + G ++ A
Sbjct: 714 KVLSAMLMCGHCPRLESFCDLVVGLLKNGKIDGA 747
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 77/169 (45%), Gaps = 1/169 (0%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
++ A+K+ +M + C+ +L+F L+ + D+ L ++ + +PD+V+YN
Sbjct: 604 YKEAKKMMFDMDYQGCKPRLLNFGVLMSDLGRRGRIDDXKTLLLEMKRRR-FKPDVVTYN 662
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
+I +G A +L EM+ G + T+ ++ GF F K+ M+
Sbjct: 663 ILINXLCKEGRAXEAYKVLVEMQVGGCEPNAATYRMMVDGFCQVEDFEGGLKVLSAMLMC 722
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
P + S+ + GL + A ++ EM +++ + + AL+K
Sbjct: 723 GHCPRLESFCDLVVGLLKNGKIDGACFVLEEMEKRKMRFHLEAWEALVK 771
>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 156/329 (47%), Gaps = 12/329 (3%)
Query: 53 FRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIA-LYGKAAMFENA 111
F + Y+ + L + E++E + K ++ + T +I +A + A
Sbjct: 6 FEPDVVTYSTIISGLCKTGKVTEALEMVEEMTE-KGVNPDVATYTIIVDRLCRAGKVDEA 64
Query: 112 RKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIK 171
++F +M R C +++NAL+ + + L +++ K G EPD ++YNTI+
Sbjct: 65 DELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASK-GYEPDNITYNTILS 123
Query: 172 AFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET--MVNMNV 229
G + A M +G D++ +N LL Y G+ A+A +++T M + V
Sbjct: 124 GLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKV 183
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
P++ +YN +DG ++T +A++L ++ +K PD T+ +++ G + N++EA+
Sbjct: 184 APDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEE 243
Query: 290 WYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLA 346
+ K SGC N A + +++ C G++ L + +R D V+D L
Sbjct: 244 MFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLC 303
Query: 347 KELRVEEAKELVE----LGKTNSYCRYNL 371
K +V++A +++E +G YN+
Sbjct: 304 KAKKVDDAHKVLEEMSKIGAVPDVVTYNI 332
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 143/311 (45%), Gaps = 14/311 (4%)
Query: 56 NTGIYTGTVQRLA---NAKR-FRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENA 111
NT Y + L N +R ++ +EE+ + +I+ + L + GK + A
Sbjct: 79 NTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCRM-GKVS---EA 134
Query: 112 RKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFK--DLPHKLGIEPDLVSYNTI 169
++ FD MP R V+++N LL A K E GLFK D+ + + PDL++YNT+
Sbjct: 135 KQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADR-KVAPDLITYNTL 193
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
I F D A L ++ KG D +T+N++LLG +AE++++ MV+
Sbjct: 194 IDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGC 253
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
PN +Y+ L G + LEL EM K +PDV A+I +++A +
Sbjct: 254 APNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHK 313
Query: 290 W---YNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLA 346
+K G + + +L+ +C+ +D A L C D +V++ L
Sbjct: 314 VLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLC 373
Query: 347 KELRVEEAKEL 357
K +V +A+ L
Sbjct: 374 KTNKVHDARVL 384
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 129/292 (44%), Gaps = 12/292 (4%)
Query: 73 FRWIEEILEHQKQYKDISKEGF-------TARLIALYGKAAMFENARKVFDEMPGRNCEQ 125
F +E+ E K +KD+ +G+ + L+ L K+ M E A ++F +M C
Sbjct: 197 FCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDE-AEEMFKKMVDSGCAP 255
Query: 126 TVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTL 185
+++ +L L++++ K PD++ N +I +D A+ +
Sbjct: 256 NGATYSIVLSGHCRVGNMARCLELYEEMTEKR-FSPDVLLCNAVIDMLCKAKKVDDAHKV 314
Query: 186 LYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAI 245
L EM K G D++T+N LL G A +++ TMV+ P++ SY+ L+GL
Sbjct: 315 LEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCK 374
Query: 246 EKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAI 302
+ A L M +++ PDV TF L+ G G L+EAK + + +
Sbjct: 375 TNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVT 434
Query: 303 FKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA 354
L+ +C D A L + + + D P +V+ L +E ++ +A
Sbjct: 435 CTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQA 486
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 76/135 (56%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G EPD+V+Y+TII G + A ++ EM +KG+ D+ T+ ++ G+ +A
Sbjct: 5 GFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEA 64
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++++ M+ N +YNA ++GL ++ ++A +L+ EM SK PD T+ ++ G
Sbjct: 65 DELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSG 124
Query: 278 FVNEGNLEEAKRWYN 292
G + EAK++++
Sbjct: 125 LCRMGKVSEAKQFFD 139
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 81/183 (44%), Gaps = 3/183 (1%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
+AR +FD M R V++FN L+ + K DE L D+ + + PD V+ T
Sbjct: 379 HDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLL-DVMSEHNVLPDGVTCTT 437
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
++ D A L M +KG D++ N +L G G+ A A +++MV +
Sbjct: 438 LMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSD 497
Query: 229 --VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEE 286
P+V +Y ++ L + +A++ +M PD + L+ G +G +
Sbjct: 498 GEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQ 557
Query: 287 AKR 289
A R
Sbjct: 558 ADR 560
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 3/146 (2%)
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M P+V +Y+ + GL + +ALE+V EM K +NPDV T+ ++ G
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60
Query: 284 LEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL 340
++EA ++K GC N + L+ +C+ +++ A+ L + S+ D
Sbjct: 61 VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120
Query: 341 VVDRLAKELRVEEAKELVELGKTNSY 366
++ L + +V EAK+ + + Y
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGY 146
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 53/117 (45%), Gaps = 1/117 (0%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLG-IEPDLVSYN 167
+ A ++F M + VL N +L K + FK + G PD+V+Y
Sbjct: 449 DEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYT 508
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
T++ A ++ G +D A +M G D + +NTL+ G GR A+++ + M
Sbjct: 509 TLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAM 565
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 69/168 (41%), Gaps = 3/168 (1%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
KA + A+ + D M N ++ L+ K+ DE LF+ + K G D+
Sbjct: 409 KAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEK-GTVADV 467
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKG--IRLDLITFNTLLLGFYSNGRFADAEKIW 221
+ +N ++ +G L A M K D++T+ TL+ GR A +
Sbjct: 468 LPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYF 527
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVF 269
+ M P+ +YN ++GL + + +A L M+ K D F
Sbjct: 528 QQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSDCF 575
>gi|414590555|tpg|DAA41126.1| TPA: hypothetical protein ZEAMMB73_459455 [Zea mays]
Length = 246
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 113/223 (50%), Gaps = 5/223 (2%)
Query: 149 LFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
LF++ P K +E + +S NT++K F D G L +A ++ ME+ G+R D+IT+ TL+ F
Sbjct: 5 LFEEGPEKYDVEVNDISCNTVVKMFCDMGDLRAAYRVMQGMERAGVRPDVITYTTLMAAF 64
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDV 268
Y GR + +W M P + +YN R+ L + +A E+ +M I PD
Sbjct: 65 YKCGRREVGDGLWNLMRLRGCVPTLATYNVRIQFLVNRGRGWQANEMARKMYVAGIKPDE 124
Query: 269 FTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKR 325
T+ +IKGF G E AK + + GC N +++ +V ++CE+ D D AF LCK
Sbjct: 125 ITYNLIIKGFFMMGEHEMAKTVFGAMHGRGCKPNNKVYQTMVHYICERRDFDLAFRLCKD 184
Query: 326 TFSERCLVDQAPLQLVVDRLAKELRVEEAKELVEL--GKTNSY 366
+ + ++ L + KE+++L G+ SY
Sbjct: 185 IMEKNWFPSVDTINQLLKGLMAISKDRNGKEIMKLVTGRKPSY 227
>gi|210077735|gb|ACJ07056.1| putative membrane-associated salt-inducible protein [Triticum
urartu]
Length = 289
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 116/227 (51%), Gaps = 9/227 (3%)
Query: 99 IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLG 158
I L+G+A + +A F P + S NALL AC+ + E +F+ P
Sbjct: 54 IVLFGQAGLLPDAISTFQSSP------STRSLNALLFACIVAGNHTEAARIFQTFPDAHR 107
Query: 159 IEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAE 218
++P+ ++N+IIK+F + G+ S ++ EM K+G++ TF + GFY RF D E
Sbjct: 108 VKPNAETFNSIIKSFSESGTTRSFYSVFDEMCKQGVKPTATTFTAAIAGFYKEERFDDVE 167
Query: 219 KIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGF 278
K+ + M + +++ YNAR+ GL + A L+ EM K P+ T+ LI GF
Sbjct: 168 KVIKLMKKHSCGESLQVYNARVQGLCKLGRNGDAKALLSEMAKKGTKPNWVTYNHLIYGF 227
Query: 279 VNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
EG+LEEAKR Y K G + + ++ +C+ GD D A +
Sbjct: 228 CKEGDLEEAKRLYKEMGKKGLVGDSGFYFTVIFHLCKAGDFDTALGV 274
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 1/124 (0%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
F++ KV M +C +++ +NA + + + L ++ K G +P+ V+YN
Sbjct: 163 FDDVEKVIKLMKKHSCGESLQVYNARVQGLCKLGRNGDAKALLSEMAKK-GTKPNWVTYN 221
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
+I F +G L+ A L EM KKG+ D + T++ G F A ++ ++
Sbjct: 222 HLIYGFCKEGDLEEAKRLYKEMGKKGLVGDSGFYFTVIFHLCKAGDFDTALGVYNEIIPR 281
Query: 228 NVRP 231
N P
Sbjct: 282 NWVP 285
>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
Length = 584
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 132/258 (51%), Gaps = 4/258 (1%)
Query: 105 AAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLV 164
A +E+A ++ EM + C V++FN L+ + + + +P K G P+ +
Sbjct: 278 AERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIP-KYGCSPNSL 336
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
SYN ++ AF + +D A L M +G D++++NTLL +G A ++ +
Sbjct: 337 SYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQL 396
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
+ P + SYN +DGL +TK+ALEL+ EM SK + PD+ T+ + G E +
Sbjct: 397 KDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRI 456
Query: 285 EEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLV 341
E+A R + K G N ++ ++ +C++ + A +L C+ +++ ++
Sbjct: 457 EDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTIL 516
Query: 342 VDRLAKELRVEEAKELVE 359
++ LA E ++EA++L++
Sbjct: 517 IEGLAYEGLIKEARDLLD 534
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 100/211 (47%), Gaps = 1/211 (0%)
Query: 78 EILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGAC 137
E+LE +Y L+ + K + A D M R C ++S+N LL A
Sbjct: 321 EVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTAL 380
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLD 197
S + D L L K G P L+SYNT+I G A LL EM KG++ D
Sbjct: 381 CRSGEVDVAVELLHQLKDK-GCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPD 439
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
+IT++T+ G R DA + + + +M +RPN YNA + GL ++T A++L
Sbjct: 440 IITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFA 499
Query: 258 EMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
M P+ T+ LI+G EG ++EA+
Sbjct: 500 YMIGNGCMPNESTYTILIEGLAYEGLIKEAR 530
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 111/254 (43%), Gaps = 4/254 (1%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K + ++ A K+ DEM + C ++++N ++ + D+ K+LP G EP+
Sbjct: 207 KRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLP-SYGCEPNT 265
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
VSYN ++K + A L+ EM +KG +++TFN L+ G A ++ E
Sbjct: 266 VSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQ 325
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
+ PN SYN L +K+ KA+ + M S+ PD+ ++ L+ G
Sbjct: 326 IPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGE 385
Query: 284 LEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL 340
++ A ++ GC + ++ + + G A L S+ D
Sbjct: 386 VDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYST 445
Query: 341 VVDRLAKELRVEEA 354
+ L +E R+E+A
Sbjct: 446 IAAGLCREDRIEDA 459
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 118/266 (44%), Gaps = 9/266 (3%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHK 156
++A Y A + AR+ E R E+ + + L+ G C + + + L + L +
Sbjct: 134 MMAGYCGAGQVDAARRWCAE---RAVERDAYTCDTLIRGLCGRGRTANALAVLDEMLRRR 190
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
PD+V+Y +++A + A LL EM KG D++T+N ++ G GR D
Sbjct: 191 --CVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDD 248
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
A + + + + PN SYN L GL ++ + A EL+GEM K P+V TF LI
Sbjct: 249 AIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLIS 308
Query: 277 GFVNEGNLE---EAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV 333
+G +E E K GC N + L+ C++ +D A S C
Sbjct: 309 FLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYP 368
Query: 334 DQAPLQLVVDRLAKELRVEEAKELVE 359
D ++ L + V+ A EL+
Sbjct: 369 DIVSYNTLLTALCRSGEVDVAVELLH 394
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 102/238 (42%), Gaps = 41/238 (17%)
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
PD+++YN ++ + G +D+A E + + D T +TL+ G GR A+A +
Sbjct: 126 PDVMAYNAMMAGYCGAGQVDAARRWCAE---RAVERDAYTCDTLIRGLCGRGRTANALAV 182
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
+ M+ P+V +Y L+ K+A++L+ EMR K PD+ T+ ++ G
Sbjct: 183 LDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQ 242
Query: 281 EGNLEE-----------------------------AKRW---------YNKSGCGMNKAI 302
EG +++ A+RW + GC N
Sbjct: 243 EGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVT 302
Query: 303 FKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVEL 360
F +L+ F+C KG ++ A + ++ C + ++ K+ ++++A ++L
Sbjct: 303 FNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDL 360
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 94/194 (48%), Gaps = 6/194 (3%)
Query: 78 EILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGAC 137
+++ + Y DI + L AL ++ + A ++ ++ + C ++S+N ++
Sbjct: 359 DLMVSRGCYPDIVS--YNTLLTALC-RSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGL 415
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLD 197
+ K E L ++ K G++PD+++Y+TI + ++ A +++ GIR +
Sbjct: 416 TKAGKTKEALELLNEMVSK-GLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPN 474
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
+ +N ++LG A ++ M+ PN +Y ++GLA E K+A +L+
Sbjct: 475 TVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLD 534
Query: 258 EM--RSKEINPDVF 269
E+ R +EI DV
Sbjct: 535 ELCSRGEEILLDVH 548
>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 665
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 166/335 (49%), Gaps = 14/335 (4%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRF--RTNTGIYTGTVQRLANAKRFRWIEEILEHQK 84
VI I K+ R+ D F+ +++G + +T YT ++ L A R+ +E+L
Sbjct: 318 VINSICKQG---RVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMV 374
Query: 85 QYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKF 143
+ E I + + + + A + ++MP C ++++NAL+ G CV +
Sbjct: 375 RKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGR-V 433
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT 203
D LF LP EP+ ++Y T++ LD+A LL EM + L+++TFN
Sbjct: 434 DSALELFNSLP----CEPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNV 489
Query: 204 LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
L+ F G +A ++ + M+ PN+ ++N LDG+ + +++ALEL+ + SK
Sbjct: 490 LVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKG 549
Query: 264 INPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAF 320
I+ D T+ +++ E +EEA + ++ G ++ ++ +C++ + D A
Sbjct: 550 ISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAI 609
Query: 321 NLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAK 355
+ S C+ +++ ++++ LA+E ++EA+
Sbjct: 610 DFFAHMVSNSCMPNESTYVILIEGLAREGLLKEAR 644
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 144/336 (42%), Gaps = 8/336 (2%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
+I G+ +E+ + + S G F+ +T YT ++ L AKR+ +E + +
Sbjct: 213 IINGMCREDRVDDARQILNRLSSYG-FQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVEN 271
Query: 87 KDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEV 146
+ E L+ + + M E A +V D M C N ++ + + D+
Sbjct: 272 NCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDA 331
Query: 147 DGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLL 206
++ G PD +SY T++K G + A LL EM +K + +TFNT +
Sbjct: 332 FEFLNNM-GSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFIC 390
Query: 207 GFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINP 266
G A + E M + +YNA ++G ++ + ALEL + + P
Sbjct: 391 ILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSLPCE---P 447
Query: 267 DVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLC 323
+ T+ L+ G + L+ A ++ C +N F +LV F C+KG ++ A L
Sbjct: 448 NTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELV 507
Query: 324 KRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
++ C + ++D + ++ EEA EL+
Sbjct: 508 QQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLH 543
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 115/258 (44%), Gaps = 19/258 (7%)
Query: 110 NARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTI 169
+A +V G V ++N L+ + D L +P + PD +Y +
Sbjct: 88 DAARVLRTAEGSGAPVDVFAYNTLVAGYCRYGRLDAARRLIASMP----VPPDAYTYTPL 143
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
I+ D+G + A +LL +M ++ + ++T+ LL + F A K+ + M
Sbjct: 144 IRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGC 203
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
PN+ +YN ++G+ E + A +++ + S PD ++ ++KG L AKR
Sbjct: 204 TPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKG------LCAAKR 257
Query: 290 WYN---------KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL 340
W + ++ C N+ F +LV F C G ++ A + R C + +
Sbjct: 258 WEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNI 317
Query: 341 VVDRLAKELRVEEAKELV 358
V++ + K+ RV++A E +
Sbjct: 318 VINSICKQGRVDDAFEFL 335
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 129/306 (42%), Gaps = 8/306 (2%)
Query: 55 TNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKV 114
T T + G R ++++L + Q ++ +T L A+ K++ F A KV
Sbjct: 139 TYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVT---YTVLLEAVC-KSSGFGQAMKV 194
Query: 115 FDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFV 174
DEM + C ++++N ++ + D+ + L G +PD VSY T++K
Sbjct: 195 LDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRL-SSYGFQPDTVSYTTVLKGLC 253
Query: 175 DKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVR 234
+ L EM + + +TF+ L+ F G A ++ + M N
Sbjct: 254 AAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTT 313
Query: 235 SYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN-- 292
N ++ + + + A E + M S +PD ++ ++KG G E+AK N
Sbjct: 314 LCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEM 373
Query: 293 -KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRV 351
+ C N+ F + +C+KG +D A L ++ C V +V+ + RV
Sbjct: 374 VRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRV 433
Query: 352 EEAKEL 357
+ A EL
Sbjct: 434 DSALEL 439
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 92/210 (43%), Gaps = 3/210 (1%)
Query: 56 NTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTAR-LIALYGKAAMFENARKV 114
NT YT + L +A+R E+L Q D T L++ + + E A ++
Sbjct: 448 NTITYTTLLTGLCHAERLDAAAELLAEMMQ-NDCPLNVVTFNVLVSFFCQKGFVEEAIEL 506
Query: 115 FDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFV 174
+M C +++FN LL +E L L K GI D ++Y++I+
Sbjct: 507 VQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSK-GISLDTITYSSIVDVLS 565
Query: 175 DKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVR 234
+ ++ A + + ++ G+R + +N +L A + MV+ + PN
Sbjct: 566 REDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNES 625
Query: 235 SYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+Y ++GLA E K+A ++ E+ S+ +
Sbjct: 626 TYVILIEGLAREGLLKEARYVLSELCSRGV 655
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/200 (19%), Positives = 86/200 (43%), Gaps = 8/200 (4%)
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
++ + + L A L+ +G D+ L+ GR +DA ++ T
Sbjct: 42 LRRLIARDDLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGA 101
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
+V +YN + G + A L+ M + PD +T+ LI+G + G + +A
Sbjct: 102 PVDVFAYNTLVAGYCRYGRLDAARRLIASM---PVPPDAYTYTPLIRGLCDRGRVGDALS 158
Query: 290 WYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLA 346
+ + C + + +L+ VC+ A + ++ C + ++++ +
Sbjct: 159 LLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMC 218
Query: 347 KELRVEEAKELVELGKTNSY 366
+E RV++A+++ L + +SY
Sbjct: 219 REDRVDDARQI--LNRLSSY 236
>gi|22135795|gb|AAM91084.1| AT4g28010/T13J8_120 [Arabidopsis thaliana]
Length = 704
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 131/258 (50%), Gaps = 6/258 (2%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
E A ++ +EM G C +++++ L+ A + K DE G K++ +G+E DLV Y
Sbjct: 193 LEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKF-MGLEADLVVYT 251
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
++I+ F D G LD L E+ ++G IT+NTL+ GF G+ +A +I+E M+
Sbjct: 252 SLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIER 311
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
VRPNV +Y +DGL +TK+AL+ + M K+ P+ T+ +I +G + +A
Sbjct: 312 GVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADA 371
Query: 288 ---KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL--VV 342
K + + +L+ +C KGDLD A L + D + ++
Sbjct: 372 VEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALI 431
Query: 343 DRLAKELRVEEAKELVEL 360
L KE R+ +A ++ +L
Sbjct: 432 HGLCKENRLHQALDIYDL 449
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 113/268 (42%), Gaps = 4/268 (1%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++IRG K LK + F+ + G R N YTG + L + + + L +
Sbjct: 287 TLIRGFCKLGQLKEASEIFEFMIERG-VRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIE 345
Query: 86 YKDISKEGFTARLIA-LYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
KD T +I K + +A ++ + M R +++N LLG D
Sbjct: 346 -KDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLD 404
Query: 145 EVDGL-FKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT 203
E L + L +PD++SYN +I + L A + + +K D +T N
Sbjct: 405 EASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNI 464
Query: 204 LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
LL G A ++W+ + + + N +Y A +DG A L+ +MR E
Sbjct: 465 LLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSE 524
Query: 264 INPDVFTFYALIKGFVNEGNLEEAKRWY 291
+ P VF + L+ EG+L++A R +
Sbjct: 525 LQPSVFDYNCLLSSLCKEGSLDQAWRLF 552
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 127/281 (45%), Gaps = 13/281 (4%)
Query: 16 ATATGPKFIG--SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRF 73
++ T P I ++I G+ KEN L + +D + DL + G T L + +
Sbjct: 417 SSYTDPDVISYNALIHGLCKENRLHQALDIY----DLLVEKLGAGDRVTTNILLNSTLKA 472
Query: 74 RWIEEILEHQKQYKDI----SKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLS 129
+ + +E KQ D + + +TA +I + K M A+ + +M + +V
Sbjct: 473 GDVNKAMELWKQISDSKIVRNSDTYTA-MIDGFCKTGMLNVAKGLLCKMRVSELQPSVFD 531
Query: 130 FNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEM 189
+N LL + D+ LF+++ PD+VS+N +I + G + SA +LL M
Sbjct: 532 YNCLLSSLCKEGSLDQAWRLFEEMQRDNNF-PDVVSFNIMIDGSLKAGDIKSAESLLVGM 590
Query: 190 EKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQT 249
+ G+ DL T++ L+ F G +A ++ MV+ P+ ++ L + +T
Sbjct: 591 SRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGET 650
Query: 250 KKALELVGEMRSKEINPDVFTFYALIKGFVN-EGNLEEAKR 289
K ELV ++ K+I D ++ N N++ AKR
Sbjct: 651 DKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLAKR 691
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 92/205 (44%), Gaps = 13/205 (6%)
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
+Y +I F G L+ A LL +M ++ + +N LL G A +++E M
Sbjct: 496 TYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEM 555
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
N P+V S+N +DG K A L+ M ++PD+FT+ LI F+ G L
Sbjct: 556 QRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYL 615
Query: 285 EEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLV 341
+EA +++K SG + I ++ + +G+ D L K+ + ++D+ V
Sbjct: 616 DEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTV 675
Query: 342 VDRLAKE----------LRVEEAKE 356
+D + LRV + KE
Sbjct: 676 MDYMCNSSANMDLAKRLLRVTDDKE 700
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 91/205 (44%), Gaps = 3/205 (1%)
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
PD+ SYNT+I+ F + L+ A L EM+ G L+T+ L+ F G+ +A
Sbjct: 175 PDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGF 234
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
+ M M + ++ Y + + G + + L E+ + +P T+ LI+GF
Sbjct: 235 LKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCK 294
Query: 281 EGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAP 337
G L+EA + + G N + L+ +C G A + +
Sbjct: 295 LGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVT 354
Query: 338 LQLVVDRLAKELRVEEAKELVELGK 362
+++++L K+ V +A E+VEL K
Sbjct: 355 YNIIINKLCKDGLVADAVEIVELMK 379
>gi|115446773|ref|NP_001047166.1| Os02g0565400 [Oryza sativa Japonica Group]
gi|113536697|dbj|BAF09080.1| Os02g0565400, partial [Oryza sativa Japonica Group]
Length = 353
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 152/322 (47%), Gaps = 9/322 (2%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
V+ GI +E + ++ K G NT Y ++ L A+R+ EE++ Q
Sbjct: 33 VVNGICQEGRVDDAIEFLKNLPSYG-CEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQK 91
Query: 87 KDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEV 146
LI+ + + E A +V +++P C LS+N LL A KK D+
Sbjct: 92 GCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKA 151
Query: 147 DGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLL 206
F DL G PD+VSYNT++ A G +D A LL++++ KG LI++NT++
Sbjct: 152 MA-FLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVID 210
Query: 207 GFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINP 266
G G+ +A ++ MV+ ++P++ +Y+ GL E + + A+ G+++ I P
Sbjct: 211 GLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRP 270
Query: 267 DVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDL----DFA 319
+ + A+I G A + +GC N++ + +L+ + +G + D
Sbjct: 271 NTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLL 330
Query: 320 FNLCKRTFSERCLVDQAPLQLV 341
LC R + L+++ ++L+
Sbjct: 331 DELCSRGVVRKSLINKGAIRLL 352
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 132/258 (51%), Gaps = 4/258 (1%)
Query: 105 AAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLV 164
A +E+A ++ EM + C V++FN L+ + + + +P K G P+ +
Sbjct: 75 AERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIP-KYGCTPNSL 133
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
SYN ++ AF + +D A L M +G D++++NTLL +G A ++ +
Sbjct: 134 SYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQL 193
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
+ P + SYN +DGL +TK+ALEL+ EM SK + PD+ T+ + G E +
Sbjct: 194 KDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRI 253
Query: 285 EEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLV 341
E+A R + K G N ++ ++ +C++ + A +L C+ +++ ++
Sbjct: 254 EDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTIL 313
Query: 342 VDRLAKELRVEEAKELVE 359
++ LA E ++EA++L++
Sbjct: 314 IEGLAYEGLIKEARDLLD 331
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 111/254 (43%), Gaps = 4/254 (1%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K + ++ A K+ DEM + C ++++N ++ + D+ K+LP G EP+
Sbjct: 4 KRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLP-SYGCEPNT 62
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
VSYN ++K + A L+ EM +KG +++TFN L+ G A ++ E
Sbjct: 63 VSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQ 122
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
+ PN SYN L +K+ KA+ + M S+ PD+ ++ L+ G
Sbjct: 123 IPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGE 182
Query: 284 LEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL 340
++ A ++ GC + ++ + + G A L S+ D
Sbjct: 183 VDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYST 242
Query: 341 VVDRLAKELRVEEA 354
+ L +E R+E+A
Sbjct: 243 IAAGLCREDRIEDA 256
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 81/181 (44%), Gaps = 3/181 (1%)
Query: 182 ANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLD 241
A LL EM KG D++T+N ++ G GR DA + + + + PN SYN L
Sbjct: 11 AMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLK 70
Query: 242 GLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLE---EAKRWYNKSGCGM 298
GL ++ + A EL+GEM K P+V TF LI +G +E E K GC
Sbjct: 71 GLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTP 130
Query: 299 NKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
N + L+ C++ +D A S C D ++ L + V+ A EL+
Sbjct: 131 NSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELL 190
Query: 359 E 359
Sbjct: 191 H 191
>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 554
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 132/258 (51%), Gaps = 4/258 (1%)
Query: 105 AAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLV 164
A +E+A ++ EM + C V++FN L+ + + + +P K G P+ +
Sbjct: 276 AERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIP-KYGCTPNSL 334
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
SYN ++ AF + +D A L M +G D++++NTLL +G A ++ +
Sbjct: 335 SYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQL 394
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
+ P + SYN +DGL +TK+ALEL+ EM SK + PD+ T+ + G E +
Sbjct: 395 KDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRI 454
Query: 285 EEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLV 341
E+A R + K G N ++ ++ +C++ + A +L C+ +++ ++
Sbjct: 455 EDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTIL 514
Query: 342 VDRLAKELRVEEAKELVE 359
++ LA E ++EA++L++
Sbjct: 515 IEGLAYEGLIKEARDLLD 532
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 100/211 (47%), Gaps = 1/211 (0%)
Query: 78 EILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGAC 137
E+LE +Y L+ + K + A D M R C ++S+N LL A
Sbjct: 319 EVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTAL 378
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLD 197
S + D L L K G P L+SYNT+I G A LL EM KG++ D
Sbjct: 379 CRSGEVDVAVELLHQLKDK-GCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPD 437
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
+IT++T+ G R DA + + + +M +RPN YNA + GL ++T A++L
Sbjct: 438 IITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFA 497
Query: 258 EMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
M P+ T+ LI+G EG ++EA+
Sbjct: 498 YMIGNGCMPNESTYTILIEGLAYEGLIKEAR 528
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 120/266 (45%), Gaps = 9/266 (3%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHK 156
++A Y A + AR++ EMP E ++N L+ G C + + + L + L +
Sbjct: 132 MVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRR 188
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
PD+V+Y +++A + A LL EM KG D++T+N ++ G GR D
Sbjct: 189 --CVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDD 246
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
A + + + + PN SYN L GL ++ + A EL+GEM K P+V TF LI
Sbjct: 247 AIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLIS 306
Query: 277 GFVNEGNLE---EAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV 333
+G +E E K GC N + L+ C++ +D A S C
Sbjct: 307 FLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYP 366
Query: 334 DQAPLQLVVDRLAKELRVEEAKELVE 359
D ++ L + V+ A EL+
Sbjct: 367 DIVSYNTLLTALCRSGEVDVAVELLH 392
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 123/271 (45%), Gaps = 12/271 (4%)
Query: 93 GFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKD 152
G A LI + AR+V C V+++NA++ + + D L +
Sbjct: 97 GTCAALIKKLSASGRTAEARRVLAA-----CGPDVMAYNAMVAGYCGAGQLDAARRLVAE 151
Query: 153 LPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNG 212
+P +EPD +YNT+I+ +G +A +L EM ++ D++T+ LL
Sbjct: 152 MP----VEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRS 207
Query: 213 RFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFY 272
+ A K+ + M + P++ +YN ++G+ E + A+E + + S P+ ++
Sbjct: 208 GYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYN 267
Query: 273 ALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSE 329
++KG E+A+ + GC N F +L+ F+C KG ++ A + ++
Sbjct: 268 IVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKY 327
Query: 330 RCLVDQAPLQLVVDRLAKELRVEEAKELVEL 360
C + ++ K+ ++++A ++L
Sbjct: 328 GCTPNSLSYNPLLHAFCKQKKMDKAMAFLDL 358
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 91/187 (48%), Gaps = 4/187 (2%)
Query: 78 EILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGAC 137
+++ + Y DI + L AL ++ + A ++ ++ + C ++S+N ++
Sbjct: 357 DLMVSRGCYPDIVS--YNTLLTALC-RSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGL 413
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLD 197
+ K E L ++ K G++PD+++Y+TI + ++ A +++ GIR +
Sbjct: 414 TKAGKTKEALELLNEMVSK-GLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPN 472
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
+ +N ++LG A ++ M+ PN +Y ++GLA E K+A +L+
Sbjct: 473 TVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLD 532
Query: 258 EMRSKEI 264
E+ S+ +
Sbjct: 533 ELCSRGV 539
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/130 (19%), Positives = 56/130 (43%), Gaps = 5/130 (3%)
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
RP+ + A + L+ +T +A ++ PDV + A++ G+ G L+ A+R
Sbjct: 93 RPDAGTCAALIKKLSASGRTAEARRVLAA-----CGPDVMAYNAMVAGYCGAGQLDAARR 147
Query: 290 WYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKEL 349
+ + + L+ +C +G A + RC+ D ++++ K
Sbjct: 148 LVAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRS 207
Query: 350 RVEEAKELVE 359
++A +L++
Sbjct: 208 GYKQAMKLLD 217
>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
Length = 773
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 135/304 (44%), Gaps = 4/304 (1%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMP 119
Y ++ L AKR+ +EE+++ + LI + +FE +V +M
Sbjct: 219 YNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMS 278
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL 179
C + + ++ + + + +P G++P++V YNT++K
Sbjct: 279 EHGCTPDIRMYATIIDGICKEGHLEVANEILNRMP-SYGLKPNVVCYNTVLKGLCSAERW 337
Query: 180 DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNAR 239
A LL EM +K LD +TFN L+ F NG ++ E M++ P+V +Y
Sbjct: 338 KEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTV 397
Query: 240 LDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEG---NLEEAKRWYNKSGC 296
++G E +A+ L+ M S P+ ++ ++KG + G + EE + GC
Sbjct: 398 INGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGC 457
Query: 297 GMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKE 356
N F L+ F+C+KG ++ A L K+ C D V+D L K + EEA E
Sbjct: 458 PPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALE 517
Query: 357 LVEL 360
L+ +
Sbjct: 518 LLNV 521
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 121/267 (45%), Gaps = 7/267 (2%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
++ F N+ +V + M + C + N +L A DE GL + L G E D+
Sbjct: 158 RSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAF-FGCEADI 216
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
VSYN ++K L+ EM + +++TFNTL+ NG F ++
Sbjct: 217 VSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQ 276
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M P++R Y +DG+ E + A E++ M S + P+V + ++KG +
Sbjct: 277 MSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAER 336
Query: 284 LEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL 340
+EA+ + + C ++ F +LV F C+ G +D L ++ S C+ D
Sbjct: 337 WKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTT 396
Query: 341 VVDRLAKELRVEEAKELVELGKTNSYC 367
V++ KE ++EA V L K+ S C
Sbjct: 397 VINGFCKEGLIDEA---VMLLKSMSSC 420
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 79/376 (21%), Positives = 155/376 (41%), Gaps = 77/376 (20%)
Query: 22 KFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILE 81
+ ++I GI KE +L+ + + G + N Y ++ L +A+R++ EE+L
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYG-LKPNVVCYNTVLKGLCSAERWKEAEELL- 344
Query: 82 HQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSK 141
EM ++C ++FN L+ +
Sbjct: 345 ----------------------------------SEMFQKDCPLDDVTFNILVDFFCQNG 370
Query: 142 KFDEVDGLFKD-LPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLIT 200
D V L + L H G PD+++Y T+I F +G +D A LL M G + + ++
Sbjct: 371 LVDRVIELLEQMLSH--GCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVS 428
Query: 201 FNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMR 260
+ +L G S GR+ DAE++ M+ PN ++N ++ L + ++A+EL+ +M
Sbjct: 429 YTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQML 488
Query: 261 SKEINPDVFTFYALIKGFVNEGNLEEAKRW---------------YNKSGCGMNK----- 300
+PD+ ++ +I G G EEA Y+ C +++
Sbjct: 489 VNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVN 548
Query: 301 ------------------AIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVV 342
++ ++ +C++ + D A + S C+ +++ +++
Sbjct: 549 KVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLI 608
Query: 343 DRLAKELRVEEAKELV 358
LA E +EA+EL+
Sbjct: 609 KGLASEGLAKEAQELL 624
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 103/237 (43%), Gaps = 2/237 (0%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
+VI G KE + V K S G + NT YT ++ L +A R+ EE++ Q
Sbjct: 396 TVINGFCKEGLIDEAVMLLKSMSSCG-CKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQ 454
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
LI K + E A ++ +M C ++S++ ++ + K +E
Sbjct: 455 QGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEE 514
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
L + +K GI P+ + Y++I A +G ++ + ++ IR D + +N ++
Sbjct: 515 ALELLNVMVNK-GISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVI 573
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
A + MV+ PN +Y + GLA E K+A EL+ E+ S+
Sbjct: 574 SSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSR 630
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 71/165 (43%), Gaps = 6/165 (3%)
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
++ +N ++ G+ G+ A A + + V PN ++ + GL + ALE++
Sbjct: 79 VVAYNAMVAGYCRAGQLAAARR---LAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLD 135
Query: 258 EMRSKEINPDVFTFYALIKGFVNEGNLEEAKR---WYNKSGCGMNKAIFKLLVPFVCEKG 314
EM K P ++ +++ G + R + GC ++ L++ +CE+G
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195
Query: 315 DLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+D A L ++ C D V+ L R + +EL++
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMD 240
>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
Length = 695
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 136/270 (50%), Gaps = 6/270 (2%)
Query: 58 GIYTGTV--QRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVF 115
G YT ++ L + E++LE + LI Y + + A +F
Sbjct: 334 GAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIF 393
Query: 116 DEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVD 175
++M R+ +++NAL+ + E + L ++ K G++P + ++NT+I A+
Sbjct: 394 EQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEM-EKSGVDPSVETFNTLIDAYGR 452
Query: 176 KGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRS 235
G L+ T+L +M+ KGI+ ++I+F +++ F NG+ +A I + M++ +V PN +
Sbjct: 453 AGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQV 512
Query: 236 YNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW-YNKS 294
YN+ +D T++A LV +M+S ++ +FT+ L+KG ++EA+ YN +
Sbjct: 513 YNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLT 572
Query: 295 GCGMNKAI--FKLLVPFVCEKGDLDFAFNL 322
G+ + + ++ C KGD D A L
Sbjct: 573 NQGLRPDVVSYNTIISACCNKGDTDRALEL 602
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 117/243 (48%), Gaps = 3/243 (1%)
Query: 52 RFRTNTGIYTGTVQRLANAKRFRWIEE-ILEHQKQYKDISKEGFTARLIALYGKAAMFEN 110
R + Y + L + E+ ++E +K D S E F LI YG+A E
Sbjct: 400 HIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNT-LIDAYGRAGQLEK 458
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
V +M + + V+SF +++ A + K E + D+ HK + P+ YN+II
Sbjct: 459 CFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHK-DVVPNAQVYNSII 517
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
A+++ G + A L+ +M+ G+ + T+N LL G N + +AE++ + N +R
Sbjct: 518 DAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLR 577
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
P+V SYN + + T +ALEL+ EM +I P + T++ L+ + G + + +
Sbjct: 578 PDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECL 637
Query: 291 YNK 293
Y
Sbjct: 638 YQH 640
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 89/168 (52%), Gaps = 9/168 (5%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHK 156
+I Y ++ E A + ++M ++ ++N LL G C NS+ DE + L +L ++
Sbjct: 516 IIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQ-IDEAEELIYNLTNQ 574
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
G+ PD+VSYNTII A +KG D A LL EM K IR L T++ LL S GR D
Sbjct: 575 -GLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHD 633
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
E +++ MV+ NV P+ Y R E ++K A L EM K I
Sbjct: 634 MECLYQHMVHKNVEPSSSIYGTR-----CENESKVA-SLKKEMSEKGI 675
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 112/233 (48%), Gaps = 4/233 (1%)
Query: 129 SFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
S+N ++ S K + +F ++ + G+ P+ ++YNT+I V G L++ L +
Sbjct: 197 SYNVVIAGLWRSGKGSDALKVFDEMVDR-GVAPNQITYNTMIDGHVKGGDLEAGFRLRDQ 255
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
M + G + +++T+N LL G GR + + + M + ++ P+ +Y+ DGL
Sbjct: 256 MLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGD 315
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKL 305
++ L L GE K + +T L+ G +G + +A++ +G AI+
Sbjct: 316 SRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNT 375
Query: 306 LVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
L+ C+ DL AF++ ++ S D +++ L K + EA++LV
Sbjct: 376 LINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLV 428
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 149/343 (43%), Gaps = 19/343 (5%)
Query: 26 SVIRGIYKENNLK---RLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEH 82
++I G K +L+ RL D+ + GR + N Y + L A R +++
Sbjct: 235 TMIDGHVKGGDLEAGFRLRDQMLQD---GR-KPNVVTYNVLLSGLCRAGRMDETRALMDE 290
Query: 83 QKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVL----SFNALLGACV 138
Y + +GFT + L+ ++R + + G + ++ V+ + + LL
Sbjct: 291 MTSYS-MLPDGFTYSI--LFDGLTRTGDSRTML-SLFGESLKKGVIIGAYTCSILLNGLC 346
Query: 139 NSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL 198
K + + + + L H G+ P YNT+I + L A ++ +M+ + IR D
Sbjct: 347 KDGKVAKAEQVLEMLVHT-GLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDH 405
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
IT+N L+ G +AE + M V P+V ++N +D Q +K ++ +
Sbjct: 406 ITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSD 465
Query: 259 MRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGD 315
M+ K I +V +F +++K F G + EA + N ++ ++ E G
Sbjct: 466 MQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGG 525
Query: 316 LDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
+ AF L ++ S L++ L K +++EA+EL+
Sbjct: 526 TEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELI 568
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 111/237 (46%), Gaps = 6/237 (2%)
Query: 129 SFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
S N LL + ++ + +V F L G PD ++N ++A V G LD A +L
Sbjct: 125 SCNLLLESLLSVGRHADVRAAFG-LLVAAGARPDTFAWNKAVQACVAAGDLDEALAMLRR 183
Query: 189 MEKK--GIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIE 246
M + D ++N ++ G + +G+ +DA K+++ MV+ V PN +YN +DG
Sbjct: 184 MGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKG 243
Query: 247 KQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK-SGCGM--NKAIF 303
+ L +M P+V T+ L+ G G ++E + ++ + M + +
Sbjct: 244 GDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTY 303
Query: 304 KLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVEL 360
+L + GD +L + + ++ ++++ L K+ +V +A++++E+
Sbjct: 304 SILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEM 360
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 124/316 (39%), Gaps = 43/316 (13%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I + K E ++ D+M + V+++N LL + + DE L ++
Sbjct: 236 MIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMT-SY 294
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
+ PD +Y+ + G + +L E KKG+ + T + LL G +G+ A A
Sbjct: 295 SMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKA 354
Query: 218 EKIWETMVNM-----------------------------------NVRPNVRSYNARLDG 242
E++ E +V+ ++RP+ +YNA ++G
Sbjct: 355 EQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALING 414
Query: 243 LAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMN 299
L + +A +LV EM ++P V TF LI + G LE+ + G N
Sbjct: 415 LCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSN 474
Query: 300 KAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
F +V C+ G + A + + + + ++D + E+A LVE
Sbjct: 475 VISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVE 534
Query: 360 ----LGKTNSYCRYNL 371
G + S YNL
Sbjct: 535 KMKSSGVSASIFTYNL 550
>gi|242074342|ref|XP_002447107.1| hypothetical protein SORBIDRAFT_06g028710 [Sorghum bicolor]
gi|241938290|gb|EES11435.1| hypothetical protein SORBIDRAFT_06g028710 [Sorghum bicolor]
Length = 363
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 144/292 (49%), Gaps = 9/292 (3%)
Query: 44 FKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYG 103
FKK+ ++ + +Y+ + +LA A+RF +EE+L K K + F RLI +YG
Sbjct: 58 FKKACSRIDYKPSEALYSLMIDKLAFARRFSDVEELLSKAKTEKLRFSDEFFYRLIKMYG 117
Query: 104 KAAMFENARKVFD---EMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIE 160
A E+ +K D MPG NC + +FN +L V ++++ V ++ P +LG+
Sbjct: 118 NVA--EHPQKAIDTLFAMPGYNCWPSTKTFNYVLHMLVCKRQYEVVHEIYSSAP-RLGVT 174
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
D S+N ++K D A +LL+EM K+G + ++ T++T + A ++
Sbjct: 175 LDTCSFNILVKGLCQCSKFDEAISLLHEMPKQGCQPNVATYSTFMHFLCQRSLVDKAFEL 234
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
+E M ++ + YN + GL E++ +A +L M S+ P+ T+ L+ G ++
Sbjct: 235 FERMRKQDIAADTVVYNILISGLCREERVSEAFDLFKSMTSEGCYPNSGTYQVLLDGLIS 294
Query: 281 EGNLEEAKRW---YNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSE 329
G EAK + G + +KLL+ +C + +D A + K+ +
Sbjct: 295 LGKFFEAKSLVSTMSTEGVRPSFQSYKLLIDGLCSEDCVDDAHLVLKQMVGQ 346
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 101/244 (41%), Gaps = 8/244 (3%)
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL 179
GR + L+ N +L N + ++ +FK ++ +P Y+ +I
Sbjct: 28 GRLDHKDWLAPNEVLKIFANIRDPSLINSVFKKACSRIDYKPSEALYSLMIDKLAFARRF 87
Query: 180 DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM---NVRPNVRSY 236
LL + + + +R F L+ Y N +K +T+ M N P+ +++
Sbjct: 88 SDVEELLSKAKTEKLRFS-DEFFYRLIKMYGNVA-EHPQKAIDTLFAMPGYNCWPSTKTF 145
Query: 237 NARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---K 293
N L L ++Q + E+ + D +F L+KG +EA + K
Sbjct: 146 NYVLHMLVCKRQYEVVHEIYSSAPRLGVTLDTCSFNILVKGLCQCSKFDEAISLLHEMPK 205
Query: 294 SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEE 353
GC N A + + F+C++ +D AF L +R + D +++ L +E RV E
Sbjct: 206 QGCQPNVATYSTFMHFLCQRSLVDKAFELFERMRKQDIAADTVVYNILISGLCREERVSE 265
Query: 354 AKEL 357
A +L
Sbjct: 266 AFDL 269
>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
Length = 457
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 132/258 (51%), Gaps = 4/258 (1%)
Query: 105 AAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLV 164
A +E+A ++ EM + C V++FN L+ + + + +P K G P+ +
Sbjct: 150 AERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIP-KYGCTPNSL 208
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
SYN ++ AF + +D A L M +G D++++NTLL +G A ++ +
Sbjct: 209 SYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQL 268
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
+ P + SYN +DGL +TK+ALEL+ EM SK + PD+ T+ + G E +
Sbjct: 269 KDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRI 328
Query: 285 EEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLV 341
E+A R + K G N ++ ++ +C++ + A +L C+ +++ ++
Sbjct: 329 EDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTIL 388
Query: 342 VDRLAKELRVEEAKELVE 359
++ LA E ++EA++L++
Sbjct: 389 IEGLAYEGLIKEARDLLD 406
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 100/211 (47%), Gaps = 1/211 (0%)
Query: 78 EILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGAC 137
E+LE +Y L+ + K + A D M R C ++S+N LL A
Sbjct: 193 EVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTAL 252
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLD 197
S + D L L K G P L+SYNT+I G A LL EM KG++ D
Sbjct: 253 CRSGEVDVAVELLHQLKDK-GCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPD 311
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
+IT++T+ G R DA + + + +M +RPN YNA + GL ++T A++L
Sbjct: 312 IITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFA 371
Query: 258 EMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
M P+ T+ LI+G EG ++EA+
Sbjct: 372 YMIGNGCMPNESTYTILIEGLAYEGLIKEAR 402
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 120/266 (45%), Gaps = 9/266 (3%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHK 156
++A Y A + AR++ EMP E ++N L+ G C + + + L + L +
Sbjct: 6 MVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRR 62
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
PD+V+Y +++A + A LL EM KG D++T+N ++ G GR D
Sbjct: 63 --CVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDD 120
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
A + + + + PN SYN L GL ++ + A EL+GEM K P+V TF LI
Sbjct: 121 AIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLIS 180
Query: 277 GFVNEGNLE---EAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV 333
+G +E E K GC N + L+ C++ +D A S C
Sbjct: 181 FLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYP 240
Query: 334 DQAPLQLVVDRLAKELRVEEAKELVE 359
D ++ L + V+ A EL+
Sbjct: 241 DIVSYNTLLTALCRSGEVDVAVELLH 266
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 112/236 (47%), Gaps = 7/236 (2%)
Query: 128 LSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLY 187
+++NA++ + + D L ++P +EPD +YNT+I+ +G +A +L
Sbjct: 1 MAYNAMVAGYCGAGQLDAARRLVAEMP----VEPDAYTYNTLIRGLCGRGRTANALAVLD 56
Query: 188 EMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEK 247
EM ++ D++T+ LL + A K+ + M + P++ +YN ++G+ E
Sbjct: 57 EMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEG 116
Query: 248 QTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFK 304
+ A+E + + S P+ ++ ++KG E+A+ + GC N F
Sbjct: 117 RVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFN 176
Query: 305 LLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVEL 360
+L+ F+C KG ++ A + ++ C + ++ K+ ++++A ++L
Sbjct: 177 MLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDL 232
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 90/185 (48%), Gaps = 4/185 (2%)
Query: 78 EILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGAC 137
+++ + Y DI + L AL ++ + A ++ ++ + C ++S+N ++
Sbjct: 231 DLMVSRGCYPDIVS--YNTLLTALC-RSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGL 287
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLD 197
+ K E L ++ K G++PD+++Y+TI + ++ A +++ GIR +
Sbjct: 288 TKAGKTKEALELLNEMVSK-GLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPN 346
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
+ +N ++LG A ++ M+ PN +Y ++GLA E K+A +L+
Sbjct: 347 TVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLD 406
Query: 258 EMRSK 262
E+ S+
Sbjct: 407 ELCSR 411
>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 772
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 135/304 (44%), Gaps = 4/304 (1%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMP 119
Y ++ L AKR+ +EE+++ + LI + +FE +V +M
Sbjct: 219 YNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMS 278
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL 179
C + + ++ + + + +P G++P++V YNT++K
Sbjct: 279 EHGCTPDIRMYATIIDGICKEGHLEVANEILNRMP-SYGLKPNVVCYNTVLKGLCSAERW 337
Query: 180 DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNAR 239
A LL EM +K LD +TFN L+ F NG ++ E M++ P+V +Y
Sbjct: 338 KEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTV 397
Query: 240 LDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEG---NLEEAKRWYNKSGC 296
++G E +A+ L+ M S P+ ++ ++KG + G + EE + GC
Sbjct: 398 INGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGC 457
Query: 297 GMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKE 356
N F L+ F+C+KG ++ A L K+ C D V+D L K + EEA E
Sbjct: 458 PPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALE 517
Query: 357 LVEL 360
L+ +
Sbjct: 518 LLNV 521
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 121/267 (45%), Gaps = 7/267 (2%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
++ F N+ +V + M + C + N +L A DE GL + L G E D+
Sbjct: 158 RSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAF-FGCEADI 216
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
VSYN ++K L+ EM + +++TFNTL+ NG F ++
Sbjct: 217 VSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQ 276
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M P++R Y +DG+ E + A E++ M S + P+V + ++KG +
Sbjct: 277 MSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAER 336
Query: 284 LEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL 340
+EA+ + + C ++ F +LV F C+ G +D L ++ S C+ D
Sbjct: 337 WKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTT 396
Query: 341 VVDRLAKELRVEEAKELVELGKTNSYC 367
V++ KE ++EA V L K+ S C
Sbjct: 397 VINGFCKEGLIDEA---VMLLKSMSSC 420
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/376 (21%), Positives = 155/376 (41%), Gaps = 77/376 (20%)
Query: 22 KFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILE 81
+ ++I GI KE +L+ + + G + N Y ++ L +A+R++ EE+L
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYG-LKPNVVCYNTVLKGLCSAERWKEAEELL- 344
Query: 82 HQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSK 141
EM ++C ++FN L+ +
Sbjct: 345 ----------------------------------SEMFQKDCPLDDVTFNILVDFFCQNG 370
Query: 142 KFDEVDGLFKD-LPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLIT 200
D V L + L H G PD+++Y T+I F +G +D A LL M G + + ++
Sbjct: 371 LVDRVIELLEQMLSH--GCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVS 428
Query: 201 FNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMR 260
+ +L G S GR+ DAE++ M+ PN ++N ++ L + ++A+EL+ +M
Sbjct: 429 YTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQML 488
Query: 261 SKEINPDVFTFYALIKGFVNEGNLEEAKRW---------------YNKSGCGMNK----- 300
+PD+ ++ +I G G EEA Y+ C +++
Sbjct: 489 VNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVN 548
Query: 301 ------------------AIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVV 342
++ ++ +C++ + D A + S C+ +++ +++
Sbjct: 549 KVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLI 608
Query: 343 DRLAKELRVEEAKELV 358
LA E +EA+EL+
Sbjct: 609 KGLASEGLAKEAQELL 624
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 103/237 (43%), Gaps = 2/237 (0%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
+VI G KE + V K S G + NT YT ++ L +A R+ EE++ Q
Sbjct: 396 TVINGFCKEGLIDEAVMLLKSMSSCG-CKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQ 454
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
LI K + E A ++ +M C ++S++ ++ + K +E
Sbjct: 455 QGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEE 514
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
L + +K GI P+ + Y++I A +G ++ + ++ IR D + +N ++
Sbjct: 515 ALELLNVMVNK-GISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVI 573
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
A + MV+ PN +Y + GLA E K+A EL+ E+ S+
Sbjct: 574 SSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSR 630
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 71/165 (43%), Gaps = 6/165 (3%)
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
++ +N ++ G+ G+ A A + + V PN ++ + GL + ALE++
Sbjct: 79 VVAYNAMVAGYCRAGQLAAARR---LAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLD 135
Query: 258 EMRSKEINPDVFTFYALIKGFVNEGNLEEAKR---WYNKSGCGMNKAIFKLLVPFVCEKG 314
EM K P ++ +++ G + R + GC ++ L++ +CE+G
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195
Query: 315 DLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+D A L ++ C D V+ L R + +EL++
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMD 240
>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
Length = 644
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 135/304 (44%), Gaps = 4/304 (1%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMP 119
Y ++ L AKR+ +EE+++ + LI + +FE +V +M
Sbjct: 219 YNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMS 278
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL 179
C + + ++ + + + +P G++P++V YNT++K
Sbjct: 279 EHGCTPDIRMYATIIDGICKEGHLEVANEILNRMP-SYGLKPNVVCYNTVLKGLCSAERW 337
Query: 180 DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNAR 239
A LL EM +K LD +TFN L+ F NG ++ E M++ P+V +Y
Sbjct: 338 KEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTV 397
Query: 240 LDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEG---NLEEAKRWYNKSGC 296
++G E +A+ L+ M S P+ ++ ++KG + G + EE + GC
Sbjct: 398 INGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGC 457
Query: 297 GMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKE 356
N F L+ F+C+KG ++ A L K+ C D V+D L K + EEA E
Sbjct: 458 PPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALE 517
Query: 357 LVEL 360
L+ +
Sbjct: 518 LLNV 521
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 121/267 (45%), Gaps = 7/267 (2%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
++ F N+ +V + M + C + N +L A DE GL + L G E D+
Sbjct: 158 RSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAF-FGCEADI 216
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
VSYN ++K L+ EM + +++TFNTL+ NG F ++
Sbjct: 217 VSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQ 276
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M P++R Y +DG+ E + A E++ M S + P+V + ++KG +
Sbjct: 277 MSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAER 336
Query: 284 LEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL 340
+EA+ + + C ++ F +LV F C+ G +D L ++ S C+ D
Sbjct: 337 WKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTT 396
Query: 341 VVDRLAKELRVEEAKELVELGKTNSYC 367
V++ KE ++EA V L K+ S C
Sbjct: 397 VINGFCKEGLIDEA---VMLLKSMSSC 420
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/376 (21%), Positives = 155/376 (41%), Gaps = 77/376 (20%)
Query: 22 KFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILE 81
+ ++I GI KE +L+ + + G + N Y ++ L +A+R++ EE+L
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYG-LKPNVVCYNTVLKGLCSAERWKEAEELL- 344
Query: 82 HQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSK 141
EM ++C ++FN L+ +
Sbjct: 345 ----------------------------------SEMFQKDCPLDDVTFNILVDFFCQNG 370
Query: 142 KFDEVDGLFKD-LPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLIT 200
D V L + L H G PD+++Y T+I F +G +D A LL M G + + ++
Sbjct: 371 LVDRVIELLEQMLSH--GCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVS 428
Query: 201 FNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMR 260
+ +L G S GR+ DAE++ M+ PN ++N ++ L + ++A+EL+ +M
Sbjct: 429 YTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQML 488
Query: 261 SKEINPDVFTFYALIKGFVNEGNLEEAKRW---------------YNKSGCGMNK----- 300
+PD+ ++ +I G G EEA Y+ C +++
Sbjct: 489 VNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVN 548
Query: 301 ------------------AIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVV 342
++ ++ +C++ + D A + S C+ +++ +++
Sbjct: 549 KVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLI 608
Query: 343 DRLAKELRVEEAKELV 358
LA E +EA+EL+
Sbjct: 609 KGLASEGLAKEAQELL 624
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 103/237 (43%), Gaps = 2/237 (0%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
+VI G KE + V K S G + NT YT ++ L +A R+ EE++ Q
Sbjct: 396 TVINGFCKEGLIDEAVMLLKSMSSCG-CKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQ 454
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
LI K + E A ++ +M C ++S++ ++ + K +E
Sbjct: 455 QGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEE 514
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
L + +K GI P+ + Y++I A +G ++ + ++ IR D + +N ++
Sbjct: 515 ALELLNVMVNK-GISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVI 573
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
A + MV+ PN +Y + GLA E K+A EL+ E+ S+
Sbjct: 574 SSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSR 630
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 71/165 (43%), Gaps = 6/165 (3%)
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
++ +N ++ G+ G+ A A + + V PN ++ + GL + ALE++
Sbjct: 79 VVAYNAMVAGYCRAGQLAAARR---LAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLD 135
Query: 258 EMRSKEINPDVFTFYALIKGFVNEGNLEEAKR---WYNKSGCGMNKAIFKLLVPFVCEKG 314
EM K P ++ +++ G + R + GC ++ L++ +CE+G
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195
Query: 315 DLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+D A L ++ C D V+ L R + +EL++
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMD 240
>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
Length = 644
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 135/304 (44%), Gaps = 4/304 (1%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMP 119
Y ++ L AKR+ +EE+++ + LI + +FE +V +M
Sbjct: 219 YNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMS 278
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL 179
C + + ++ + + + +P G++P++V YNT++K
Sbjct: 279 EHGCTPDIRMYATIIDGICKEGHLEVANEILNRMP-SYGLKPNVVCYNTVLKGLCSAERW 337
Query: 180 DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNAR 239
A LL EM +K LD +TFN L+ F NG ++ E M++ P+V +Y
Sbjct: 338 KEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTV 397
Query: 240 LDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEG---NLEEAKRWYNKSGC 296
++G E +A+ L+ M S P+ ++ ++KG + G + EE + GC
Sbjct: 398 INGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGC 457
Query: 297 GMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKE 356
N F L+ F+C+KG ++ A L K+ C D V+D L K + EEA E
Sbjct: 458 PPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALE 517
Query: 357 LVEL 360
L+ +
Sbjct: 518 LLNV 521
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 121/267 (45%), Gaps = 7/267 (2%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
++ F N+ +V + M + C + N +L A DE GL + L G E D+
Sbjct: 158 RSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAF-FGCEADI 216
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
VSYN ++K L+ EM + +++TFNTL+ NG F ++
Sbjct: 217 VSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQ 276
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M P++R Y +DG+ E + A E++ M S + P+V + ++KG +
Sbjct: 277 MSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAER 336
Query: 284 LEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL 340
+EA+ + + C ++ F +LV F C+ G +D L ++ S C+ D
Sbjct: 337 WKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTT 396
Query: 341 VVDRLAKELRVEEAKELVELGKTNSYC 367
V++ KE ++EA V L K+ S C
Sbjct: 397 VINGFCKEGLIDEA---VMLLKSMSSC 420
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/376 (21%), Positives = 155/376 (41%), Gaps = 77/376 (20%)
Query: 22 KFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILE 81
+ ++I GI KE +L+ + + G + N Y ++ L +A+R++ EE+L
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYG-LKPNVVCYNTVLKGLCSAERWKEAEELL- 344
Query: 82 HQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSK 141
EM ++C ++FN L+ +
Sbjct: 345 ----------------------------------SEMFQKDCPLDDVTFNILVDFFCQNG 370
Query: 142 KFDEVDGLFKD-LPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLIT 200
D V L + L H G PD+++Y T+I F +G +D A LL M G + + ++
Sbjct: 371 LVDRVIELLEQMLSH--GCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVS 428
Query: 201 FNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMR 260
+ +L G S GR+ DAE++ M+ PN ++N ++ L + ++A+EL+ +M
Sbjct: 429 YTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQML 488
Query: 261 SKEINPDVFTFYALIKGFVNEGNLEEAKRW---------------YNKSGCGMNK----- 300
+PD+ ++ +I G G EEA Y+ C +++
Sbjct: 489 VNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVN 548
Query: 301 ------------------AIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVV 342
++ ++ +C++ + D A + S C+ +++ +++
Sbjct: 549 KVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLI 608
Query: 343 DRLAKELRVEEAKELV 358
LA E +EA+EL+
Sbjct: 609 KGLASEGLAKEAQELL 624
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 103/237 (43%), Gaps = 2/237 (0%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
+VI G KE + V K S G + NT YT ++ L +A R+ EE++ Q
Sbjct: 396 TVINGFCKEGLIDEAVMLLKSMSSCG-CKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQ 454
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
LI K + E A ++ +M C ++S++ ++ + K +E
Sbjct: 455 QGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEE 514
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
L + +K GI P+ + Y++I A +G ++ + ++ IR D + +N ++
Sbjct: 515 ALELLNVMVNK-GISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVI 573
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
A + MV+ PN +Y + GLA E K+A EL+ E+ S+
Sbjct: 574 SSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSR 630
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 71/165 (43%), Gaps = 6/165 (3%)
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
++ +N ++ G+ G+ A A + + V PN ++ + GL + ALE++
Sbjct: 79 VVAYNAMVAGYCRAGQLAAARR---LAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLD 135
Query: 258 EMRSKEINPDVFTFYALIKGFVNEGNLEEAKR---WYNKSGCGMNKAIFKLLVPFVCEKG 314
EM K P ++ +++ G + R + GC ++ L++ +CE+G
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195
Query: 315 DLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+D A L ++ C D V+ L R + +EL++
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMD 240
>gi|449532274|ref|XP_004173107.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g53330-like [Cucumis sativus]
Length = 394
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 158/324 (48%), Gaps = 42/324 (12%)
Query: 76 IEEILEHQKQYKDIS-KEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL 134
+EEIL+ KQ + E +IA YG+A + + A +VF+ +P C++TV S N+LL
Sbjct: 1 MEEILQQLKQETRFAPHEVIFCNVIAFYGRAHLPDRAFQVFERIPSFRCKRTVKSVNSLL 60
Query: 135 GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGI 194
A + +++ +++ +F D+ + PD ++N +I A G LD+ + EM+K+G+
Sbjct: 61 AALLKNRQLEKMTQVFVDISNYGS--PDACTFNILIHAACLCGDLDAVWGVFDEMQKRGV 118
Query: 195 RLDLITFNTLLLGFYSNGRFADAEKIWETMVNM-NVRPNVRSYNARLDGLAIEKQTKKAL 253
+ +++TF TL+ G N + +A ++ E MV + ++PN Y + G + A
Sbjct: 119 KPNVVTFGTLIYGLSLNSKLKEALRLKEDMVKVYMIKPNASIYTTLIKGFCGVGELNFAF 178
Query: 254 ELVGEM-----------------------RSKEIN------------PDVFTFYALIKGF 278
+L EM R +E++ PD T+ A+I G
Sbjct: 179 KLKEEMVTSNVKLVSAVYSTLISALFKHGRKEEVSDILREMGENGCKPDTVTYNAIINGH 238
Query: 279 VNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQ 335
E +LE A R + + GC + F ++ ++C++G LD A +L + C D
Sbjct: 239 CKENDLESAHRVMDEMVEKGCKPDVFSFNTIIGWLCKEGKLDKAMDLLEDMPRRGCPPDV 298
Query: 336 APLQLVVDRLAKELRVEEAKELVE 359
+++ D L + ++++EA +++
Sbjct: 299 LSYRIIFDGLCEMMQLKEATSILD 322
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 95/202 (47%), Gaps = 3/202 (1%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A K+ +EM N + ++ L+ A + +EV + +++ G +PD V+YN II
Sbjct: 177 AFKLKEEMVTSNVKLVSAVYSTLISALFKHGRKEEVSDILREMGEN-GCKPDTVTYNAII 235
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
+ L+SA+ ++ EM +KG + D+ +FNT++ G+ A + E M
Sbjct: 236 NGHCKENDLESAHRVMDEMVEKGCKPDVFSFNTIIGWLCKEGKLDKAMDLLEDMPRRGCP 295
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
P+V SY DGL Q K+A ++ EM K P + L+ E N+E
Sbjct: 296 PDVLSYRIIFDGLCEMMQLKEATSILDEMIFKGYVPRNESINKLVDRLCQECNMELLWMI 355
Query: 291 YNKSGCG--MNKAIFKLLVPFV 310
N G G MN ++ +V FV
Sbjct: 356 LNSLGRGNRMNMDMWARVVAFV 377
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
E+A +V DEM + C+ V SFN ++G K D+ L +D+P + G PD++SY
Sbjct: 244 LESAHRVMDEMVEKGCKPDVFSFNTIIGWLCKEGKLDKAMDLLEDMPRR-GCPPDVLSYR 302
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKG 193
I + L A ++L EM KG
Sbjct: 303 IIFDGLCEMMQLKEATSILDEMIFKG 328
>gi|210077731|gb|ACJ07054.1| putative membrane-associated salt-inducible protein [Aegilops
speltoides]
Length = 289
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 115/227 (50%), Gaps = 9/227 (3%)
Query: 99 IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLG 158
I L+G+A + +A F P + S NALL AC+ + E +F+ P
Sbjct: 54 IVLFGQAGLLPDAISTFQSSP------STRSLNALLFACIVAGNHAEAARIFQTFPDAHR 107
Query: 159 IEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAE 218
++P+ ++N+IIK+F + G+ S ++ EM K+G++ TF + GFY RF D E
Sbjct: 108 VKPNAETFNSIIKSFSESGTTRSFYSVFDEMCKQGVKPTATTFTAAIAGFYKEERFDDVE 167
Query: 219 KIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGF 278
K+ + M +++ YNAR+ GL + A L+ EM K P+ T+ LI GF
Sbjct: 168 KVIKLMKKHGCGESLQVYNARVQGLCKLGRNGDAKALLSEMAKKGTKPNWVTYNHLIYGF 227
Query: 279 VNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
EG+LEEAKR Y K G + + ++ +C+ GD D A +
Sbjct: 228 CKEGDLEEAKRLYKEMGKKGLVGDSGFYFTVIFHLCKAGDFDTALGV 274
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
F++ KV M C +++ +NA + + + L ++ K G +P+ V+YN
Sbjct: 163 FDDVEKVIKLMKKHGCGESLQVYNARVQGLCKLGRNGDAKALLSEMAKK-GTKPNWVTYN 221
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
+I F +G L+ A L EM KKG+ D + T++ G F A ++ ++
Sbjct: 222 HLIYGFCKEGDLEEAKRLYKEMGKKGLVGDSGFYFTVIFHLCKAGDFDTALGVYNEIIPR 281
Query: 228 NVRP 231
N P
Sbjct: 282 NWVP 285
>gi|210077733|gb|ACJ07055.1| putative membrane-associated salt-inducible protein [Triticum
monococcum]
Length = 277
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 115/227 (50%), Gaps = 9/227 (3%)
Query: 99 IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLG 158
I L+G+A + +A F P + S NALL AC+ + E +F+ P
Sbjct: 42 IVLFGQAGLLPDAITTFQSSP------STRSLNALLFACIVAGNHAEAARIFQTFPDAHR 95
Query: 159 IEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAE 218
++P+ ++N+IIK+F + G+ S ++ EM K+G++ TF + GFY RF D E
Sbjct: 96 VKPNAETFNSIIKSFSESGTTRSFYSVFDEMCKQGVKPTATTFTAAIAGFYKEERFDDVE 155
Query: 219 KIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGF 278
K+ + M +++ YNAR+ GL + A L+ EM K P+ T+ LI GF
Sbjct: 156 KVIKLMKKHGCGESLQVYNARVQGLCKLGRNGDAKALLSEMAKKGTKPNWVTYNHLIYGF 215
Query: 279 VNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
EG+LEEAKR Y K G + + ++ +C+ GD D A +
Sbjct: 216 CKEGDLEEAKRLYKEMGKKGLVGDSGFYFTVIFHLCKSGDFDTALGV 262
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 1/124 (0%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
F++ KV M C +++ +NA + + + L ++ K G +P+ V+YN
Sbjct: 151 FDDVEKVIKLMKKHGCGESLQVYNARVQGLCKLGRNGDAKALLSEMAKK-GTKPNWVTYN 209
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
+I F +G L+ A L EM KKG+ D + T++ +G F A ++ ++
Sbjct: 210 HLIYGFCKEGDLEEAKRLYKEMGKKGLVGDSGFYFTVIFHLCKSGDFDTALGVYNEIIPR 269
Query: 228 NVRP 231
N P
Sbjct: 270 NWVP 273
>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 652
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 135/264 (51%), Gaps = 4/264 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+ + K + + VFD M + + +++N+L+ K+ ++ +F +
Sbjct: 301 LVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQG- 359
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ PD+ SY+ +I F D A L EM +K I D++T+++L+ G +GR + A
Sbjct: 360 GVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYA 419
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ + M + V P +R+YN+ LD L Q KA+ L+ +++ K I P+++T+ LIKG
Sbjct: 420 LQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKG 479
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
G LE+A++ + G +N + +++ C +G + A L + C+ D
Sbjct: 480 LCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPD 539
Query: 335 QAPLQLVVDRLAKELRVEEAKELV 358
++++ L K+ + A++L+
Sbjct: 540 AKTYEIIILSLFKKDENDMAEKLL 563
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 112/249 (44%), Gaps = 33/249 (13%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A + + G + V+ +N ++ + K +E LF ++ K GI PD+V+Y+ +I
Sbjct: 209 ALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISK-GISPDVVTYSALI 267
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
F G L+ A L +M + I+ D+ TFN L+ F +G+ + + +++ M+ ++
Sbjct: 268 SGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIK 327
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
PN +YN+ +DG + K+ KA + M +NPD+ ++ +I GF
Sbjct: 328 PNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGF------------ 375
Query: 291 YNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELR 350
C+ D A NL K + + D ++D L+K R
Sbjct: 376 --------------------CKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGR 415
Query: 351 VEEAKELVE 359
+ A +LV+
Sbjct: 416 ISYALQLVD 424
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 109/246 (44%), Gaps = 39/246 (15%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
++A +F+ + RN FN +LG+ V SK + V L + + + GI+P+LV+ N
Sbjct: 67 DDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFR-GIKPNLVNCNI 125
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAE---------- 218
+I F G + A ++ ++ K G D ITF TL+ G G+ A
Sbjct: 126 LINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALG 185
Query: 219 ----------------KIWETMVNMN---------VRPNVRSYNARLDGLAIEKQTKKAL 253
K+ ET ++ V+PNV YN +D + K +A
Sbjct: 186 FHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAF 245
Query: 254 ELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFV 310
+L EM SK I+PDV T+ ALI GF G L +A +NK + F +LV
Sbjct: 246 DLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAF 305
Query: 311 CEKGDL 316
C+ G +
Sbjct: 306 CKDGKM 311
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 82/171 (47%), Gaps = 1/171 (0%)
Query: 96 ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPH 155
+ LI K+ A ++ D+M R T+ ++N++L A + D+ L L
Sbjct: 404 SSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKD 463
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
K GI+P++ +Y+ +IK G L+ A + + KG L++ T+ ++ GF G F
Sbjct: 464 K-GIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFN 522
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINP 266
+A + M + P+ ++Y + L + + A +L+ EM ++ + P
Sbjct: 523 EALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRP 573
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 38/199 (19%), Positives = 82/199 (41%), Gaps = 3/199 (1%)
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
+ +SY++ F +D A +L + ++ FN +L + + +
Sbjct: 49 NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
+ M ++PN+ + N ++ A + ++ PD TF LIKG +
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLK 168
Query: 282 GNLEEAKRWYNKS---GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPL 338
G +++A +++K G ++ + L+ +C+ G+ A +L +R +
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMY 228
Query: 339 QLVVDRLAKELRVEEAKEL 357
++D + K V EA +L
Sbjct: 229 NTIIDSMCKVKLVNEAFDL 247
>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 135/284 (47%), Gaps = 10/284 (3%)
Query: 84 KQYKDISKEGFTAR------LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGAC 137
+ Y+++ + G LI+ Y M + A KVF EM + V+++N L+G
Sbjct: 249 QMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGL 308
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLD 197
KKF E L + +K+G+ P++V+YN +I F D G +D+A L +++ G+
Sbjct: 309 CRGKKFGEAVKLVHKV-NKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPT 367
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
L+T+NTL+ G+ A A + + M + P+ +Y +D A T+KA E+
Sbjct: 368 LVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHS 427
Query: 258 EMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSG---CGMNKAIFKLLVPFVCEKG 314
M + PDV+T+ LI G GN++EA + + G N I+ ++ C++G
Sbjct: 428 LMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEG 487
Query: 315 DLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
A L + + A + L ++ + +EA+ L+
Sbjct: 488 SSYRALRLLNEMVHSGMVPNVASFCSTIGLLCRDEKWKEAELLL 531
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 114/274 (41%), Gaps = 11/274 (4%)
Query: 55 TNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKV 114
T T +Y V ++ L H + L+ L ++ F+ A +
Sbjct: 87 TYTPLYDTIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNYFDKAWWI 146
Query: 115 FDEMPGRNCEQTVL---SFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIK 171
F+E+ + VL SF ++ C + F + L L + G+ P++V Y T+I
Sbjct: 147 FNELKSK----VVLDAYSFGIMIKGCCEAGYFVKGFRLLAML-EEFGLSPNVVIYTTLID 201
Query: 172 AFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRP 231
G++ A L +M++ G+ + T++ L+ GF+ G + +++E M + P
Sbjct: 202 GCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVP 261
Query: 232 NVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW- 290
N +YN + KA ++ EMR K I V T+ LI G EA +
Sbjct: 262 NAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLV 321
Query: 291 --YNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
NK G N + +L+ C+ G +D A L
Sbjct: 322 HKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRL 355
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 85/179 (47%), Gaps = 2/179 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LIA Y K A + EM R + +++ L+ A + E L K
Sbjct: 374 LIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDA-FARLNYTEKACEMHSLMEKS 432
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ PD+ +Y+ +I G++ A+ L + + ++ + + +NT++ G+ G A
Sbjct: 433 GLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRA 492
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
++ MV+ + PNV S+ + + L +++ K+A L+G+M + + P V + Y ++
Sbjct: 493 LRLLNEMVHSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSV-SLYKMVH 550
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 94/201 (46%), Gaps = 11/201 (5%)
Query: 39 RLVDKFKKSSDLGRFRTNTGIYTG--TVQRLANAKRFRWIEEILEHQKQYKDISKEGFTA 96
RL ++ K S T + G V+ LA A ++ + E +++ SK +T
Sbjct: 354 RLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGA-----LDLVKEMEERCIAPSKVTYTI 408
Query: 97 RLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPH 155
LI + + E A ++ M V +++ L+ G CV+ E LFK L
Sbjct: 409 -LIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGN-MKEASKLFKSLG- 465
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
++ ++P+ V YNT+I + +GS A LL EM G+ ++ +F + + + ++
Sbjct: 466 EMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTIGLLCRDEKWK 525
Query: 216 DAEKIWETMVNMNVRPNVRSY 236
+AE + M+N ++P+V Y
Sbjct: 526 EAELLLGQMINSGLKPSVSLY 546
>gi|218195588|gb|EEC78015.1| hypothetical protein OsI_17428 [Oryza sativa Indica Group]
Length = 363
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 137/284 (48%), Gaps = 5/284 (1%)
Query: 40 LVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLI 99
+ FK++ D ++ N +Y+ + RLA+ +RF +EE+L + + F RLI
Sbjct: 54 ITGSFKRACDRRDYKPNEALYSLMIDRLASCRRFSDVEEVLARARAESFRFSDEFFYRLI 113
Query: 100 ALYGKAAMF-ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLG 158
+YG A + A + MPG NC + +FN +L V ++++ V ++ +LG
Sbjct: 114 KMYGNVANHPQKAIETLFAMPGYNCWPSTKTFNYVLHMLVCKRQYEVVHEVYLS-ASRLG 172
Query: 159 IEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAE 218
+ D +N ++K G D A +LLYEM K+G ++ T++TL+ +G+ A
Sbjct: 173 VTLDTCCFNILVKGLCQFGKFDDAISLLYEMPKQGCVPNVTTYSTLMNFLCQHGQVDKAF 232
Query: 219 KIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGF 278
++ E M ++ + YN + GL E++ +A L M K P+ T+ L+ G
Sbjct: 233 ELCERMQKEDIAADAVVYNILISGLCREQRVTEAFNLFKSMVPKGCYPNSGTYQVLLDGL 292
Query: 279 VNEGNLEEAKRWYNKSGCGMNK---AIFKLLVPFVCEKGDLDFA 319
++ G EAK + + + FKLL+ +C LD A
Sbjct: 293 LSSGKFVEAKGLVSMMRAERMRPGFSSFKLLIDGLCSVNCLDDA 336
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 96/244 (39%), Gaps = 8/244 (3%)
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL 179
GR + LS N LL N + + G FK + +P+ Y+ +I
Sbjct: 28 GRLDHKDWLSPNELLKIFANIRDPSLITGSFKRACDRRDYKPNEALYSLMIDRLASCRRF 87
Query: 180 DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM---NVRPNVRSY 236
+L + R F L+ Y N +K ET+ M N P+ +++
Sbjct: 88 SDVEEVLARARAESFRFS-DEFFYRLIKMYGNVA-NHPQKAIETLFAMPGYNCWPSTKTF 145
Query: 237 NARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW---YNK 293
N L L ++Q + E+ + D F L+KG G ++A K
Sbjct: 146 NYVLHMLVCKRQYEVVHEVYLSASRLGVTLDTCCFNILVKGLCQFGKFDDAISLLYEMPK 205
Query: 294 SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEE 353
GC N + L+ F+C+ G +D AF LC+R E D +++ L +E RV E
Sbjct: 206 QGCVPNVTTYSTLMNFLCQHGQVDKAFELCERMQKEDIAADAVVYNILISGLCREQRVTE 265
Query: 354 AKEL 357
A L
Sbjct: 266 AFNL 269
>gi|210077729|gb|ACJ07053.1| putative membrane-associated salt-inducible protein [Secale
cereale]
Length = 289
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 115/227 (50%), Gaps = 9/227 (3%)
Query: 99 IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLG 158
I L+G+A + +A F P + S NALL AC+ + E +F+ P
Sbjct: 54 IVLFGQAGLLPDAISTFQSSP------STRSLNALLFACIVAGNHAEAARIFQTFPDAHR 107
Query: 159 IEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAE 218
++P+ ++N+IIK+F + G+ S ++ EM K+G++ TF + GFY RF D E
Sbjct: 108 VKPNAETFNSIIKSFSESGTTRSFYSVFDEMCKEGVKPTATTFTAAIAGFYKEERFDDVE 167
Query: 219 KIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGF 278
K+ + M +++ YNAR+ GL + A L+ EM K P+ T+ LI GF
Sbjct: 168 KVIKLMKKHGCGESLQVYNARVQGLCKLGRNGDAKALLSEMAKKGTKPNWVTYNHLIYGF 227
Query: 279 VNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
EG+LEEAKR Y K G + + ++ +C+ GD D A +
Sbjct: 228 CKEGDLEEAKRLYKEMGKKGLVGDSGFYFTVIFHLCKAGDFDTALGV 274
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 46/231 (19%), Positives = 91/231 (39%), Gaps = 13/231 (5%)
Query: 7 LLSCSFSTTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQR 66
LL + ST ++ + + +++ N F+ D R + N + ++
Sbjct: 62 LLPDAISTFQSSPSTRSLNALLFACIVAGNHAEAARIFQTFPDAHRVKPNAETFNSIIKS 121
Query: 67 LANAKRFRWIEEILEHQKQYKDISKEGFTARLIAL------YGKAAMFENARKVFDEMPG 120
+ + R + + ++ KEG + K F++ KV M
Sbjct: 122 FSESGTTRSFYSV------FDEMCKEGVKPTATTFTAAIAGFYKEERFDDVEKVIKLMKK 175
Query: 121 RNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLD 180
C +++ +NA + + + L ++ K G +P+ V+YN +I F +G L+
Sbjct: 176 HGCGESLQVYNARVQGLCKLGRNGDAKALLSEMAKK-GTKPNWVTYNHLIYGFCKEGDLE 234
Query: 181 SANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRP 231
A L EM KKG+ D + T++ G F A ++ ++ N P
Sbjct: 235 EAKRLYKEMGKKGLVGDSGFYFTVIFHLCKAGDFDTALGVYNEIIPRNWVP 285
>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
Length = 691
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 115/231 (49%), Gaps = 6/231 (2%)
Query: 93 GFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKD 152
+ A L+AL A +AR+ FD M V ++N L+ A E + +D
Sbjct: 118 AYNAVLLAL--SDASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSILRD 175
Query: 153 LPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNG 212
+ G P++V+YNT++ AF G +D A L+ M G++ +L+TFN+++ G G
Sbjct: 176 M-RGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAG 234
Query: 213 RFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFY 272
+ DA K+++ M+ + P+ SYN + G + +AL + EM K I PDV TF
Sbjct: 235 KMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFT 294
Query: 273 ALIKGFVNEGNLEEA---KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAF 320
+LI GNLE A R + G MN+ F L+ C+KG LD A
Sbjct: 295 SLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDAL 345
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 124/257 (48%), Gaps = 4/257 (1%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
KA E+ARKVFDEM +S+N L+G + E +F ++ K GI PD+
Sbjct: 232 KAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQK-GIMPDV 290
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
V++ ++I G+L+ A TL+ +M ++G++++ +TF L+ GF G DA
Sbjct: 291 VTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRG 350
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M ++P+V YNA ++G + + +A EL+ EM +K + PDV T+ +I + +
Sbjct: 351 MRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCD 410
Query: 284 LEEA---KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL 340
A + + G + + L+ +CE+ L A L K D+
Sbjct: 411 THSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTS 470
Query: 341 VVDRLAKELRVEEAKEL 357
++D KE VE A L
Sbjct: 471 LIDGHCKEGNVERALSL 487
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 133/285 (46%), Gaps = 16/285 (5%)
Query: 60 YTGTVQRLANAKRFRW----IEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVF 115
+T + + A W + ++ E Q +++ FTA LI + K ++A
Sbjct: 293 FTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVT---FTA-LIDGFCKKGFLDDALLAV 348
Query: 116 DEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVD 175
M + +V+ +NAL+ + DE L ++ K G++PD+V+Y+TII A+
Sbjct: 349 RGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAK-GLKPDVVTYSTIISAYCK 407
Query: 176 KGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRS 235
SA L +M +KG+ D IT+++L+ R +DA +++ M+ + ++P+ +
Sbjct: 408 NCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFT 467
Query: 236 YNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK----RWY 291
Y + +DG E ++AL L +M + PDV T+ LI G EA+ + Y
Sbjct: 468 YTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLY 527
Query: 292 NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQA 336
++ N L+ C K +L L K F + L+++A
Sbjct: 528 HEEPIPANTKYDALM--HCCRKAELKSVLALLK-GFCMKGLMNEA 569
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/325 (18%), Positives = 131/325 (40%), Gaps = 56/325 (17%)
Query: 52 RFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFT-ARLIALYGKAAMFEN 110
R + + Y + R E+L H+ + K + + T + +I+ Y K +
Sbjct: 355 RIKPSVVCYNALINGYCMVGRMDEARELL-HEMEAKGLKPDVVTYSTIISAYCKNCDTHS 413
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A ++ +M + +++++L+ K+ + LFK++ KLG++PD +Y ++I
Sbjct: 414 AFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMI-KLGLQPDEFTYTSLI 472
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL-------------------------- 204
+G+++ A +L +M K G+ D++T++ L
Sbjct: 473 DGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPI 532
Query: 205 ------------------------LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARL 240
L GF G +A+K++++M++ N + Y+ +
Sbjct: 533 PANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLI 592
Query: 241 DGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK--SGCGM 298
G KAL +M + P+ + +LI+G G + EA + + + C +
Sbjct: 593 HGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNCCSL 652
Query: 299 NKA-IFKLLVPFVCEKGDLDFAFNL 322
A K L+ +G++D ++
Sbjct: 653 ADAEASKALIDLNLNEGNVDAVLDV 677
>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 485
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 154/304 (50%), Gaps = 10/304 (3%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARL-IALYGKAAMFENARKVFDEM 118
++ + ++A +K + + + H + I + ++ + I + + F A V +M
Sbjct: 72 FSKVLSKIAKSKNYDLVISLFHHM-EVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKM 130
Query: 119 PGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKG 177
E V++ ++L+ G C ++ FD +D + K ++G PD+V YNTII G
Sbjct: 131 MKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSK--MEEMGFRPDVVIYNTIIDGSCKIG 188
Query: 178 SLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYN 237
++ A L ME+ G+R D +T+N+L+ G +GR++DA ++ MV ++ PNV ++
Sbjct: 189 LVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFT 248
Query: 238 ARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KS 294
A +D E + +A++L EM + ++PDVFT+ +LI G G ++EAK+ +
Sbjct: 249 AVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTK 308
Query: 295 GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV-DQAPLQLVVDRLAKELRVEE 353
GC + + L+ C+ +D L R ++R LV D ++ + R +
Sbjct: 309 GCLPDVVTYNTLINGFCKSKRVDEGTKL-FREMAQRGLVGDTITYNTIIQGYFQAGRPDA 367
Query: 354 AKEL 357
A+E+
Sbjct: 368 AQEI 371
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 109/203 (53%), Gaps = 5/203 (2%)
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
FTA +I ++ K F A K+++EM R + V ++N+L+ + DE + DL
Sbjct: 247 FTA-VIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQML-DL 304
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
G PD+V+YNT+I F +D L EM ++G+ D IT+NT++ G++ GR
Sbjct: 305 MVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGR 364
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
A++I+ M+ RPN+R+Y+ L GL + + +KAL L M+ EI D+ T+
Sbjct: 365 PDAAQEIFS---RMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNI 421
Query: 274 LIKGFVNEGNLEEAKRWYNKSGC 296
+I G GN+E+A + C
Sbjct: 422 VIHGMCKIGNVEDAWDLFRSLSC 444
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 123/254 (48%), Gaps = 1/254 (0%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K + +A ++FD M +++N+L+ S ++ + L +D+ + I P++
Sbjct: 186 KIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMR-DIVPNV 244
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
+++ +I FV +G A L EM ++ + D+ T+N+L+ G +GR +A+++ +
Sbjct: 245 ITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDL 304
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
MV P+V +YN ++G K+ + +L EM + + D T+ +I+G+ G
Sbjct: 305 MVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGR 364
Query: 284 LEEAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVD 343
+ A+ +++ N + +L+ +C ++ A L + +D +V+
Sbjct: 365 PDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIH 424
Query: 344 RLAKELRVEEAKEL 357
+ K VE+A +L
Sbjct: 425 GMCKIGNVEDAWDL 438
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 92/200 (46%), Gaps = 36/200 (18%)
Query: 99 IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLG 158
+ ++G+ + A+++ D M + C V+++N L+ SK+ DE LF+++ + G
Sbjct: 289 LCMHGRV---DEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQR-G 344
Query: 159 IEPDLVSYNTIIKAFVDKGSLDSA----------------NTLLY--------------- 187
+ D ++YNTII+ + G D+A + LLY
Sbjct: 345 LVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLF 404
Query: 188 -EMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIE 246
M+K I LD+ T+N ++ G G DA ++ ++ ++P+V SY + G +
Sbjct: 405 ENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRK 464
Query: 247 KQTKKALELVGEMRSKEINP 266
+Q K+ L +M+ + P
Sbjct: 465 RQWDKSDLLYRKMQEDGLLP 484
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 84/202 (41%), Gaps = 3/202 (1%)
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
P +V ++ ++ + D +L + ME GI DL ++N ++ RF A +
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
M+ P+V + ++ ++G + A++LV +M PDV + +I G
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 186
Query: 281 EGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAP 337
G + +A ++ + G + + LV +C G A L + + +
Sbjct: 187 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 246
Query: 338 LQLVVDRLAKELRVEEAKELVE 359
V+D KE + EA +L E
Sbjct: 247 FTAVIDVFVKEGKFSEAMKLYE 268
>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
Length = 426
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 154/304 (50%), Gaps = 10/304 (3%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARL-IALYGKAAMFENARKVFDEM 118
++ + ++A +K + + + H + I + ++ + I + + F A V +M
Sbjct: 13 FSKVLSKIAKSKNYDLVISLFHHM-EVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKM 71
Query: 119 PGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKG 177
E V++ ++L+ G C ++ FD +D + K ++G PD+V YNTII G
Sbjct: 72 MKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSK--MEEMGFRPDVVIYNTIIDGSCKIG 129
Query: 178 SLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYN 237
++ A L ME+ G+R D +T+N+L+ G +GR++DA ++ MV ++ PNV ++
Sbjct: 130 LVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFT 189
Query: 238 ARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KS 294
A +D E + +A++L EM + ++PDVFT+ +LI G G ++EAK+ +
Sbjct: 190 AVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTK 249
Query: 295 GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV-DQAPLQLVVDRLAKELRVEE 353
GC + + L+ C+ +D L R ++R LV D ++ + R +
Sbjct: 250 GCLPDVVTYNTLINGFCKSKRVDEGTKL-FREMAQRGLVGDTITYNTIIQGYFQAGRPDA 308
Query: 354 AKEL 357
A+E+
Sbjct: 309 AQEI 312
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 109/203 (53%), Gaps = 5/203 (2%)
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
FTA +I ++ K F A K+++EM R + V ++N+L+ + DE + DL
Sbjct: 188 FTA-VIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQML-DL 245
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
G PD+V+YNT+I F +D L EM ++G+ D IT+NT++ G++ GR
Sbjct: 246 MVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGR 305
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
A++I+ M+ RPN+R+Y+ L GL + + +KAL L M+ EI D+ T+
Sbjct: 306 PDAAQEIFS---RMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNI 362
Query: 274 LIKGFVNEGNLEEAKRWYNKSGC 296
+I G GN+E+A + C
Sbjct: 363 VIHGMCKIGNVEDAWDLFRSLSC 385
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 123/254 (48%), Gaps = 1/254 (0%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K + +A ++FD M +++N+L+ S ++ + L +D+ + I P++
Sbjct: 127 KIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMR-DIVPNV 185
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
+++ +I FV +G A L EM ++ + D+ T+N+L+ G +GR +A+++ +
Sbjct: 186 ITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDL 245
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
MV P+V +YN ++G K+ + +L EM + + D T+ +I+G+ G
Sbjct: 246 MVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGR 305
Query: 284 LEEAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVD 343
+ A+ +++ N + +L+ +C ++ A L + +D +V+
Sbjct: 306 PDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIH 365
Query: 344 RLAKELRVEEAKEL 357
+ K VE+A +L
Sbjct: 366 GMCKIGNVEDAWDL 379
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 92/200 (46%), Gaps = 36/200 (18%)
Query: 99 IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLG 158
+ ++G+ + A+++ D M + C V+++N L+ SK+ DE LF+++ + G
Sbjct: 230 LCMHGRV---DEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQR-G 285
Query: 159 IEPDLVSYNTIIKAFVDKGSLDSA----------------NTLLY--------------- 187
+ D ++YNTII+ + G D+A + LLY
Sbjct: 286 LVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLF 345
Query: 188 -EMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIE 246
M+K I LD+ T+N ++ G G DA ++ ++ ++P+V SY + G +
Sbjct: 346 ENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRK 405
Query: 247 KQTKKALELVGEMRSKEINP 266
+Q K+ L +M+ + P
Sbjct: 406 RQWDKSDLLYRKMQEDGLLP 425
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 84/202 (41%), Gaps = 3/202 (1%)
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
P +V ++ ++ + D +L + ME GI DL ++N ++ RF A +
Sbjct: 8 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 67
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
M+ P+V + ++ ++G + A++LV +M PDV + +I G
Sbjct: 68 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 127
Query: 281 EGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAP 337
G + +A ++ + G + + LV +C G A L + + +
Sbjct: 128 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 187
Query: 338 LQLVVDRLAKELRVEEAKELVE 359
V+D KE + EA +L E
Sbjct: 188 FTAVIDVFVKEGKFSEAMKLYE 209
>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
Length = 599
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 125/265 (47%), Gaps = 12/265 (4%)
Query: 105 AAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLV 164
A + A ++F M + C + +FN L+ A K DE L K + G PD+V
Sbjct: 233 AYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDD-GHVPDVV 291
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
+Y+T+I +D A LL +M K+ + ++T NTL+ G GR +A ++ + M
Sbjct: 292 TYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAM 351
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
V+ P+V +YN + G QT++A EL+ +M ++ + P+V T+ AL+ G L
Sbjct: 352 VSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRL 411
Query: 285 EEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLV 341
EA + + SGC N + L+ C G +D L F E +P +V
Sbjct: 412 PEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKL----FGEMVCAGISPDHVV 467
Query: 342 VDRLAKEL----RVEEAKELVELGK 362
LA EL R A E++ G+
Sbjct: 468 YGTLAAELCKSGRSARALEILREGR 492
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 156/359 (43%), Gaps = 21/359 (5%)
Query: 25 GSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQK 84
G +I G+ K L + F+K G +T YT + L A F E+
Sbjct: 14 GILIDGLAKAGKLNDARNLFQKLLHSG-VTPSTVAYTSLIHGLCMANSFDDAREL----- 67
Query: 85 QYKDISKEGFTAR------LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACV 138
+ D+++ G +I K M E A + +M V+++N ++
Sbjct: 68 -FADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLC 126
Query: 139 NSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL 198
S + +E LF ++ +LG P+ S+NTII + +D A + +EME K I D
Sbjct: 127 KSSRVEEALLLFNEM-ERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDS 185
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
++ L+ G G+ +A K+++ M++ + P+ +YN + G+ + +ALEL
Sbjct: 186 WSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKS 245
Query: 259 MRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGD 315
MRSK P FTF LI G L+EA R + G + + L+ +C
Sbjct: 246 MRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIAR 305
Query: 316 LDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKE----LVELGKTNSYCRYN 370
+D A +L + +C ++ L K R++EA+E +V G++ YN
Sbjct: 306 VDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYN 364
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 97/220 (44%), Gaps = 7/220 (3%)
Query: 159 IEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAE 218
+ PD SY +I G L+ A L ++ G+ + + +L+ G F DA
Sbjct: 6 VSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAR 65
Query: 219 KIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGF 278
+++ M P+ +YN +D ++A +L+ +M PDV T+ ++ G
Sbjct: 66 ELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGL 125
Query: 279 VNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQ 335
+EEA +N + GC N+ ++ +C++ +D A + ++ D
Sbjct: 126 CKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDS 185
Query: 336 APLQLVVDRLAKELRVEEA----KELVELGKTNSYCRYNL 371
+++D LAK ++ EA + +++ G T S YN+
Sbjct: 186 WSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNV 225
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 7/143 (4%)
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
NV P+ SY +DGLA + A L ++ + P + +LI G + ++A
Sbjct: 5 NVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDA 64
Query: 288 KRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDR 344
+ + N+ GC + + +++ C++G L+ A +L K+ + + D V+D
Sbjct: 65 RELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDG 124
Query: 345 LAKELRVEEA----KELVELGKT 363
L K RVEEA E+ LG T
Sbjct: 125 LCKSSRVEEALLLFNEMERLGCT 147
>gi|356544600|ref|XP_003540737.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
mitochondrial-like [Glycine max]
Length = 449
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 147/328 (44%), Gaps = 52/328 (15%)
Query: 53 FRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENAR 112
FR Y + +LA ++ F +E IL H K + +E L YG E A
Sbjct: 70 FRHYYPSYAALLYKLARSRMFDAVETILAHMKDTEMQCRESVFIALFQHYGP----EKAV 125
Query: 113 KVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLG-------------- 158
++F+ MP NC +T+ SFNALL +++ +FDE + +F +++G
Sbjct: 126 ELFNRMPQFNCTRTIQSFNALLNVLIDNDRFDEANDIFGK-SYEMGFRPNTVTFNIMVKG 184
Query: 159 ---------------------IEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLD 197
++P +V+YN++I KG LD A LL +M +KG +
Sbjct: 185 RLAKGEWGKACEVFDEMLQKRVQPSVVTYNSLIGFLCRKGDLDKAMALLEDMGQKGKHAN 244
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
+T+ L+ G S + +A+K+ M + ++ ++ L + ++A L+
Sbjct: 245 EVTYALLMEGLCSVEKTEEAKKLMFDMAYRGCKAQPVNFGVLMNDLGKRGKVEEAKSLLH 304
Query: 258 EMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW---YNKSGCGMNKAIFKLLVPFVCEKG 314
EM+ + + PDV T+ LI EG EA + GC N A ++++V +C+ G
Sbjct: 305 EMKKRRLKPDVVTYNILINYLCKEGKAMEAYKVLLEMQIGGCVPNAATYRMVVDGLCQIG 364
Query: 315 DLDFAFNL---------CKRTFSERCLV 333
D + A ++ C R+ + C+V
Sbjct: 365 DFEVALSVLNAMLTSRHCPRSETFNCMV 392
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 128/288 (44%), Gaps = 28/288 (9%)
Query: 42 DKFKKSSDLGRFRTNTGIYTGTVQ-RLANA---KRFRWIEEILEHQKQYKDISKEGFTAR 97
D F KS ++G FR NT + V+ RLA K +E+L+ + Q ++
Sbjct: 161 DIFGKSYEMG-FRPNTVTFNIMVKGRLAKGEWGKACEVFDEMLQKRVQPSVVTYNS---- 215
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + + A + ++M + +++ L+ + +K +E L D+ ++
Sbjct: 216 LIGFLCRKGDLDKAMALLEDMGQKGKHANEVTYALLMEGLCSVEKTEEAKKLMFDMAYR- 274
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G + V++ ++ +G ++ A +LL+EM+K+ ++ D++T+N L+ G+ +A
Sbjct: 275 GCKAQPVNFGVLMNDLGKRGKVEEAKSLLHEMKKRRLKPDVVTYNILINYLCKEGKAMEA 334
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
K+ M PN +Y +DGL + AL ++ M + P TF ++ G
Sbjct: 335 YKVLLEMQIGGCVPNAATYRMVVDGLCQIGDFEVALSVLNAMLTSRHCPRSETFNCMVVG 394
Query: 278 FVNEGN-------LEEAKR---------WYN--KSGCGMNKAIFKLLV 307
+ GN LEE ++ W KS C NK +L+
Sbjct: 395 LLKSGNIDGSCFVLEEMEKRKLEFDLESWETIIKSACSENKGASELMT 442
>gi|90399325|emb|CAJ86125.1| H0313F03.9 [Oryza sativa Indica Group]
Length = 466
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 124/250 (49%), Gaps = 2/250 (0%)
Query: 40 LVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLI 99
+ FK++ D ++ N +Y+ + RLA+ +RF +EE+L + + F RLI
Sbjct: 54 ITGSFKRACDRRDYKPNEALYSLMIDRLASCRRFSDVEEVLARARAESFRFSDEFFYRLI 113
Query: 100 ALYGKAAMF-ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLG 158
+YG A + A + MPG NC + +FN +L V ++++ V ++ +LG
Sbjct: 114 KMYGNVANHPQKAIETLFAMPGYNCWPSTKTFNYVLHMLVCKRQYEVVHEVYLS-ASRLG 172
Query: 159 IEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAE 218
+ D +N ++K G D A +LLYEM K+G ++ T++TL+ +G+ A
Sbjct: 173 VTLDTCCFNILVKGLCQFGKFDDAISLLYEMPKQGCVPNVTTYSTLMNFLCQHGQVDKAF 232
Query: 219 KIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGF 278
++ E M ++ + YN + GL E++ +A L M K P+ T+ L+ G
Sbjct: 233 ELCERMQKEDIAADAVVYNILISGLCREQRVTEAFNLFKSMVPKGCYPNSGTYQVLLDGL 292
Query: 279 VNEGNLEEAK 288
++ G EAK
Sbjct: 293 LSSGKFVEAK 302
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 96/244 (39%), Gaps = 8/244 (3%)
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL 179
GR + LS N LL N + + G FK + +P+ Y+ +I
Sbjct: 28 GRLDHKDWLSPNELLKIFANIRDPSLITGSFKRACDRRDYKPNEALYSLMIDRLASCRRF 87
Query: 180 DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM---NVRPNVRSY 236
+L + R F L+ Y N +K ET+ M N P+ +++
Sbjct: 88 SDVEEVLARARAESFRFS-DEFFYRLIKMYGNVA-NHPQKAIETLFAMPGYNCWPSTKTF 145
Query: 237 NARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW---YNK 293
N L L ++Q + E+ + D F L+KG G ++A K
Sbjct: 146 NYVLHMLVCKRQYEVVHEVYLSASRLGVTLDTCCFNILVKGLCQFGKFDDAISLLYEMPK 205
Query: 294 SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEE 353
GC N + L+ F+C+ G +D AF LC+R E D +++ L +E RV E
Sbjct: 206 QGCVPNVTTYSTLMNFLCQHGQVDKAFELCERMQKEDIAADAVVYNILISGLCREQRVTE 265
Query: 354 AKEL 357
A L
Sbjct: 266 AFNL 269
>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
Length = 603
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 125/265 (47%), Gaps = 12/265 (4%)
Query: 105 AAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLV 164
A + A ++F M + C + +FN L+ A K DE L K + G PD+V
Sbjct: 233 AYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDD-GHVPDVV 291
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
+Y+T+I +D A LL +M K+ + ++T NTL+ G GR +A ++ + M
Sbjct: 292 TYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAM 351
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
V+ P+V +YN + G QT++A EL+ +M ++ + P+V T+ AL+ G L
Sbjct: 352 VSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRL 411
Query: 285 EEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLV 341
EA + + SGC N + L+ C G +D L F E +P +V
Sbjct: 412 PEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKL----FGEMVCAGISPDHVV 467
Query: 342 VDRLAKEL----RVEEAKELVELGK 362
LA EL R A E++ G+
Sbjct: 468 YGTLAAELCKSGRSARALEILREGR 492
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 137/300 (45%), Gaps = 39/300 (13%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI KA +AR +F ++ + +++ +L+ + FD+ LF D+ ++
Sbjct: 16 LIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADM-NRR 74
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G P V+YN II A +G L+ A L+ +M + G D++T+NT++ G +GR +A
Sbjct: 75 GCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEA 134
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ M + PN RS+N + GL + + +A ++ EM +++I PD +++ LI G
Sbjct: 135 LLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDG 194
Query: 278 FVNEGNLEEAKRWYNK--------------------------------------SGCGMN 299
G L EA + + + GC +
Sbjct: 195 LAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPS 254
Query: 300 KAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ F +L+ C++G +D AF L KR + + D ++ L RV++A+ L+E
Sbjct: 255 RFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLE 314
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 97/220 (44%), Gaps = 7/220 (3%)
Query: 159 IEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAE 218
+ PD SY +I G L+ A L ++ G+ + + +L+ G F DA
Sbjct: 6 VSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAR 65
Query: 219 KIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGF 278
+++ M P+ +YN +D ++A +L+ +M PDV T+ ++ G
Sbjct: 66 ELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGL 125
Query: 279 VNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQ 335
G +EEA +N + GC N+ ++ +C++ +D A + + D
Sbjct: 126 CKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDS 185
Query: 336 APLQLVVDRLAKELRVEEA----KELVELGKTNSYCRYNL 371
+++D LAK ++ EA + +++ G T S YN+
Sbjct: 186 WSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNV 225
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 7/150 (4%)
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
NV P+ SY +DGLA + A +L ++ + P + +LI G + ++A
Sbjct: 5 NVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDA 64
Query: 288 KRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDR 344
+ + N+ GC + + +++ C++G L+ A +L K+ + + D V+D
Sbjct: 65 RELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDG 124
Query: 345 LAKELRVEEA----KELVELGKTNSYCRYN 370
L K RVEEA E+ LG T + +N
Sbjct: 125 LCKSGRVEEALLLFNEMERLGCTPNRRSHN 154
>gi|38344321|emb|CAE02149.2| OSJNBa0058K23.3 [Oryza sativa Japonica Group]
gi|38345611|emb|CAD41894.2| OSJNBa0093O08.13 [Oryza sativa Japonica Group]
Length = 368
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 147/307 (47%), Gaps = 6/307 (1%)
Query: 40 LVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLI 99
+ FK++ D ++ N +Y+ + RLA+ +RF +EE+L + + + F RLI
Sbjct: 54 ITSSFKRACDRRDYKPNEALYSMMIDRLASCRRFSDVEELLARARAERFRFSDEFFYRLI 113
Query: 100 ALYGKAAMF-ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLG 158
+YG A E A + MPG NC + +FN +L V ++++ V ++ +LG
Sbjct: 114 KMYGNVANHPEKAIETLFAMPGYNCWPSTKTFNYVLHMLVCKRQYEVVHEVYLS-ASRLG 172
Query: 159 IEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAE 218
+ D +N ++K G A +LLYEM K+G ++ T++TL+ +G+ A
Sbjct: 173 VTLDTCCFNILVKGLCQFGKFGDAISLLYEMPKQGCVPNVTTYSTLMNFLCQHGQVDKAF 232
Query: 219 KIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGF 278
++ E M ++ + YN + GL E++ +A L M K P+ T+ L+ G
Sbjct: 233 ELCERMQKEDIVADAVVYNILIAGLCREQRVTEAFNLFKSMVPKGCYPNSGTYQVLLDGL 292
Query: 279 VNEGNLEEAKRWYNKSGCGMNK---AIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQ 335
++ G EAK + + + FKLL+ +C LD A +L + E+ V +
Sbjct: 293 LSSGKFVEAKGLVSMMRAERMRPGFSSFKLLIDGLCSVNCLDDA-HLVLKQMVEQGFVPR 351
Query: 336 APLQLVV 342
L+V
Sbjct: 352 LIFTLIV 358
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 95/244 (38%), Gaps = 8/244 (3%)
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL 179
GR + LS N LL N + + FK + +P+ Y+ +I
Sbjct: 28 GRLDHKDWLSPNELLKIFANIRDPSLITSSFKRACDRRDYKPNEALYSMMIDRLASCRRF 87
Query: 180 DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM---NVRPNVRSY 236
LL + R F L+ Y N EK ET+ M N P+ +++
Sbjct: 88 SDVEELLARARAERFRFS-DEFFYRLIKMYGNVA-NHPEKAIETLFAMPGYNCWPSTKTF 145
Query: 237 NARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW---YNK 293
N L L ++Q + E+ + D F L+KG G +A K
Sbjct: 146 NYVLHMLVCKRQYEVVHEVYLSASRLGVTLDTCCFNILVKGLCQFGKFGDAISLLYEMPK 205
Query: 294 SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEE 353
GC N + L+ F+C+ G +D AF LC+R E + D +++ L +E RV E
Sbjct: 206 QGCVPNVTTYSTLMNFLCQHGQVDKAFELCERMQKEDIVADAVVYNILIAGLCREQRVTE 265
Query: 354 AKEL 357
A L
Sbjct: 266 AFNL 269
>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
Length = 724
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 159/383 (41%), Gaps = 52/383 (13%)
Query: 24 IGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQ 83
IGS R E LK F + D R + IY + L + RF+ I I
Sbjct: 118 IGSYRRAGSSEQALK----TFYRMQDF-RVKPTVKIYNHILDALLDENRFQMINPI---- 168
Query: 84 KQYKDISKEGFTAR------LIALYGKAAMFENARKVFDEMPGRNCEQ------------ 125
Y ++ K+G L+ K + A K+ EM + C+
Sbjct: 169 --YSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSL 226
Query: 126 ------------------TVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
+V +NAL+ F+E L ++ +K GI+P+++SY
Sbjct: 227 CKLGKVKEARELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNK-GIDPNVISYT 285
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
TII A D G+++ + +L +M +G +L TF +L+ GF+ G +A W+ M+
Sbjct: 286 TIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIRE 345
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLE-- 285
V PNV +YNA + GL ++ A+ + +M P+V T+ ALI G+ G+L+
Sbjct: 346 GVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGA 405
Query: 286 -EAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDR 344
E W GC N + +V +C + A+ L + E C + +
Sbjct: 406 SEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKG 465
Query: 345 LAKELRVEEA-KELVELGKTNSY 366
L RV+ A K ++G + +
Sbjct: 466 LCGSGRVDWAIKVFDQMGNSGCF 488
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 94/174 (54%), Gaps = 2/174 (1%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A KVFD+M C ++N LL + + ++F E GL KD+ H+ GIE +LV+YNTII
Sbjct: 475 AIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHR-GIELNLVTYNTII 533
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
+ G L A LL +M +G + D IT N ++ + G+ A ++ + +
Sbjct: 534 YGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWH 593
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG-FVNEGN 283
P++ +Y + + G+ ++A+ + M S+ I+P+V T+ L++ F N G+
Sbjct: 594 PDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMGH 647
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 102/213 (47%), Gaps = 4/213 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
++ + + +MF A + + M NC ++FN + S + D +F + +
Sbjct: 427 MVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNS- 485
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G P+ +YN ++ + + A L+ +ME +GI L+L+T+NT++ G+ G +A
Sbjct: 486 GCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEA 545
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ MV +P+ + N +D + + A++L+ + + + +PD+ + +LI G
Sbjct: 546 LELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISG 605
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLV 307
+EEA + + G N A + +LV
Sbjct: 606 ICTHIGVEEAIVYLRRMLSEGISPNVATWNVLV 638
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 111/248 (44%), Gaps = 4/248 (1%)
Query: 110 NARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTI 169
+A VF++M C V +++AL+ + D ++ + G P++V+Y +
Sbjct: 369 DAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITH-GCHPNVVAYTCM 427
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
+ + A L+ M+ + + +TFNT + G +GR A K+++ M N
Sbjct: 428 VDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGC 487
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
PN +YN LD L +++ +A LV +M + I ++ T+ +I G+ G L EA
Sbjct: 488 FPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALE 547
Query: 290 WYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLA 346
K G + +++ C++G ++ A L R + + D ++ +
Sbjct: 548 LLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGIC 607
Query: 347 KELRVEEA 354
+ VEEA
Sbjct: 608 THIGVEEA 615
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 96/213 (45%), Gaps = 8/213 (3%)
Query: 150 FKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFY 209
FK + + + ++Y +I+ + +D LL +M+ +GI F +++ +
Sbjct: 63 FKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYR 122
Query: 210 SNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVF 269
G A K + M + V+P V+ YN LD L E + + + M+ + P+VF
Sbjct: 123 RAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVF 182
Query: 270 TFYALIKGFVNEGNLEEAKRW---YNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRT 326
T+ L+K ++ A + + GC ++ + L+ +C+ G + A L +
Sbjct: 183 TYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEAREL-AMS 241
Query: 327 FSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
F+ V A +++ + KE EEA +L++
Sbjct: 242 FTPSVPVYNA----LINGVCKEYTFEEAFQLLD 270
>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
Length = 544
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 142/294 (48%), Gaps = 12/294 (4%)
Query: 76 IEEILEHQKQYKDISKEGFTAR------LIALYGKAAMFENARKVFDEMPGRNCEQTVLS 129
I + E Q K+I K G+ +I Y K E A +VF +M NC ++
Sbjct: 221 IGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVT 280
Query: 130 FNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDK-GSLDSANTLLYE 188
FN L+ + ++ LF ++ K+G + +V+YNT+I + K G + +A L +
Sbjct: 281 FNTLIAGFCKAGMLEDAIKLFAEM-EKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNK 339
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
+E G+ ++T+N+L+ GF R ++A + ++ M PNV +Y+ +DGL ++
Sbjct: 340 LEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEG-KCAPNVITYSILIDGLCKVRR 398
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKL 305
K+A + + +M++ P V T+ LI GF G L+ A ++ K +GC N IF
Sbjct: 399 MKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNT 458
Query: 306 LVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
L+ +C+ + L +E C D ++ L RVE+A+ L +
Sbjct: 459 LIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFD 512
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 113/261 (43%), Gaps = 38/261 (14%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKK--FDEVDGLFKDLPH 155
LIA + KA M E+A K+F EM C+ T++++N L+ + + + VD LF L
Sbjct: 284 LIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVD-LFNKL-E 341
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKK----------------------- 192
G+ P +V+YN++I+ F D L A EME K
Sbjct: 342 GAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGKCAPNVITYSILIDGLCKVRRMKE 401
Query: 193 -----------GIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLD 241
G ++T+ L+ GF G A +E M PN +N +D
Sbjct: 402 AAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLID 461
Query: 242 GLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKA 301
GL ++ L L+ M ++ PDV T+ LI G + +E+A+R ++ C N
Sbjct: 462 GLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGMACAPNVT 521
Query: 302 IFKLLVPFVCEKGDLDFAFNL 322
F L+ +C + ++ A N+
Sbjct: 522 TFNFLIRGLCAQKKVEEARNI 542
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 139/299 (46%), Gaps = 24/299 (8%)
Query: 27 VIRGIYK----ENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLA-NAKRFRWIEEILE 81
++RG + + L L D K SS + TG Y ++ L K +E+ +E
Sbjct: 108 LLRGFFMAGRVRDALAHLQDMRKSSSSVA-----TGTYNLVLKGLCWENKSANRLEQAME 162
Query: 82 HQKQYK----DISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GA 136
K+ K + E + L AL M E A +F M C ++++N L+ G
Sbjct: 163 FFKEMKASGVEPDLESYHILLSALSDSGRMAE-AHALFSAM---TCSPDIMTYNVLMDGY 218
Query: 137 CVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRL 196
C + + E L K++ K G EP++ +Y+ II + ++ A + +M +
Sbjct: 219 CKIGQTY-EAQSLMKEIL-KAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVP 276
Query: 197 DLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEK-QTKKALEL 255
+ +TFNTL+ GF G DA K++ M + + + +YN +D L ++ A++L
Sbjct: 277 NAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDL 336
Query: 256 VGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN--KSGCGMNKAIFKLLVPFVCE 312
++ + P + T+ +LI+GF + L EA ++++ + C N + +L+ +C+
Sbjct: 337 FNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGKCAPNVITYSILIDGLCK 395
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 113/266 (42%), Gaps = 40/266 (15%)
Query: 131 NALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEME 190
NALL V+++K D+ LFK++ L P+ +YN +I+ F G + A ++ +M+
Sbjct: 1 NALLSGLVSARKHDQALRLFKEVLAGL-FAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMK 59
Query: 191 KKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRS--------------- 235
G+ + T NTLLLG G+ + A K++ M P S
Sbjct: 60 SSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVR 119
Query: 236 --------------------YNARLDGLAIEKQT----KKALELVGEMRSKEINPDVFTF 271
YN L GL E ++ ++A+E EM++ + PD+ ++
Sbjct: 120 DALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESY 179
Query: 272 YALIKGFVNEGNLEEAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERC 331
+ L+ + G + EA ++ C + + +L+ C+ G A +L K
Sbjct: 180 HILLSALSDSGRMAEAHALFSAMTCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGY 239
Query: 332 LVDQAPLQLVVDRLAKELRVEEAKEL 357
+ ++++ K +VEEA E+
Sbjct: 240 EPNVFTYSIIINCYCKLDKVEEAWEV 265
>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Cucumis sativus]
Length = 749
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 141/280 (50%), Gaps = 15/280 (5%)
Query: 99 IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEV-DGLFKDLPHKL 157
+ L KA N K + MPG VLS+NA+L A + +K+ ++ +G+FK++
Sbjct: 145 VNLINKALSIVNLAKSYGFMPG------VLSYNAILDAVIRTKQSVKIAEGIFKEMVES- 197
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ P++ +YN +I+ F G+L+ EME+ G +++T+NT++ + + +A
Sbjct: 198 GVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEA 257
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
K+ M + PN+ SYN ++GL E Q K+ E++ EM + PD TF LI G
Sbjct: 258 FKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLING 317
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
+ N GN +A + K+G N + L+ +C+ G+L+ A + +
Sbjct: 318 YCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPN 377
Query: 335 QAPLQLVVDRLAKELRVEEA----KELVELGKTNSYCRYN 370
++D +++ +++A KE+VE G T + YN
Sbjct: 378 GRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYN 417
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 117/236 (49%), Gaps = 5/236 (2%)
Query: 56 NTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFT-ARLIALYGKAAMFENARKV 114
N YT + + A E L+ + + + G T LI + + + A ++
Sbjct: 342 NVVTYTTLINSMCKAGNLNRAMEFLDQMRD-RGLHPNGRTYTTLIDGFSQQGFLKQAYQI 400
Query: 115 FDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAF 173
EM T++++NAL+ G C+ + ++ GL +++ + G PD+VSY+TII F
Sbjct: 401 MKEMVENGFTPTIITYNALINGHCI-LGRMEDASGLLQEMIER-GFIPDVVSYSTIISGF 458
Query: 174 VDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNV 233
L+ A L EM KGI D+ T+++L+ G R + +++ M+++ + P+
Sbjct: 459 CRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDE 518
Query: 234 RSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
+Y + ++ IE KAL L EM K +PD+ T+ LI GF + +EAKR
Sbjct: 519 VTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKR 574
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 132/280 (47%), Gaps = 34/280 (12%)
Query: 96 ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPH 155
+ +I+ + + E A ++ EM + V ++++L+ ++ EV LF+++
Sbjct: 452 STIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEML- 510
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
LG+ PD V+Y ++I A+ +G LD A L EM +KG D++T+N L+ GF R
Sbjct: 511 SLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTK 570
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
+A+++ ++ PN +YN +D + K AL AL+
Sbjct: 571 EAKRLLLKLLYEESVPNEITYNTLIDNCN-NLEFKSAL-------------------ALM 610
Query: 276 KGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCL 332
KGF +G + EA R + G +N+ ++ +++ + G+++ A+NL K
Sbjct: 611 KGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHS--- 667
Query: 333 VDQAPLQLVVDRLAKELRVEEAKELVELGKTNSY----CR 368
AP + + LAK L E KE VEL + Y CR
Sbjct: 668 -GFAPHSVTIMALAKSL-YHEGKE-VELNQLLDYTLKSCR 704
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 126/269 (46%), Gaps = 6/269 (2%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
VI G+ +E +K + ++ S R+ + + + N F + ++ H +
Sbjct: 279 VINGLCREGQMKETSEILEEMSK-RRYVPDRVTFNTLINGYCNVGNFH--QALVLHAEMV 335
Query: 87 KD-ISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
K+ +S T LI KA A + D+M R ++ L+
Sbjct: 336 KNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLK 395
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
+ + K++ G P +++YN +I G ++ A+ LL EM ++G D+++++T+
Sbjct: 396 QAYQIMKEMVEN-GFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTI 454
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+ GF N A ++ MV + P+V +Y++ + GL +++ + +L EM S +
Sbjct: 455 ISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGL 514
Query: 265 NPDVFTFYALIKGFVNEGNLEEAKRWYNK 293
PD T+ +LI + EG+L++A R +++
Sbjct: 515 PPDEVTYTSLINAYCIEGDLDKALRLHDE 543
>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 568
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 165/373 (44%), Gaps = 40/373 (10%)
Query: 25 GSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYT----GTVQR--LANAKRF----- 73
G VI+G + +++ D + + G F N IYT G +R + AK
Sbjct: 167 GIVIKGCCEAGEIEKSFDLLVELREFG-FSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMG 225
Query: 74 -------RWIEEILEHQKQYKDISKEGFTAR-----------------LIALYGKAAMFE 109
W +L H I K+GF ++ + K +
Sbjct: 226 KFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTK 285
Query: 110 NARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTI 169
+A K+FDEM R ++++N L+G K +E + + + GI P+L++YNT+
Sbjct: 286 DAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSD-GINPNLITYNTL 344
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
I F G L A +L +++ +G+ L+T+N L+ GF G + A K+ + M +
Sbjct: 345 IDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGI 404
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
+P+ +Y +D A +KA++L M + PDV T+ LI GF +G + EA R
Sbjct: 405 KPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASR 464
Query: 290 WYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLA 346
+ NK I+ +V C++G A L + + + A + +++ L
Sbjct: 465 LFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLC 524
Query: 347 KELRVEEAKELVE 359
KE + +EA+ LVE
Sbjct: 525 KERKSKEAEGLVE 537
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 113/271 (41%), Gaps = 52/271 (19%)
Query: 98 LIALYGKAAMFENARKVFDEM------PGRNCEQTVLSFNALLGACVNSKKFDEVDGLFK 151
+I Y ++ +++ F+EM PG NC FN LL V S F++ F
Sbjct: 100 MINAYVQSQSLDSSISYFNEMVDKGFVPGSNC------FNNLLTFVVGSSSFNQWWRFFN 153
Query: 152 DLPHKLGIEPDLVSYNTIIKAFVD-----------------------------------K 176
+ K+ ++ D+ S+ +IK + +
Sbjct: 154 E--SKIKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKR 211
Query: 177 GSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSY 236
G ++ A L +EM K G+ + T+ L+ G + NG +++E M V PN+ +Y
Sbjct: 212 GEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTY 271
Query: 237 NARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK--- 293
N ++ + +TK A +L EMR + ++ ++ T+ LI G E EA + ++
Sbjct: 272 NCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKS 331
Query: 294 SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCK 324
G N + L+ C G L A +LC+
Sbjct: 332 DGINPNLITYNTLIDGFCGVGKLGKALSLCR 362
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 86/174 (49%), Gaps = 11/174 (6%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLP--- 154
L++ + K A KV EM R + + +++ L+ F +D + K +
Sbjct: 379 LVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDT------FARMDNMEKAIQLRS 432
Query: 155 --HKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNG 212
+LG+ PD+ +Y+ +I F KG ++ A+ L M K + + + +NT++LG+ G
Sbjct: 433 PMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEG 492
Query: 213 RFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINP 266
A +++ M + PNV SY ++ L E+++K+A LV +M I+P
Sbjct: 493 SSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDTGIDP 546
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 92/215 (42%), Gaps = 14/215 (6%)
Query: 166 YNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMV 225
Y +I A+V SLDS+ + EM KG FN LL + F W
Sbjct: 97 YEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQ----WWRFF 152
Query: 226 N---MNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEG 282
N + V +V S+ + G + +K+ +L+ E+R +P+V + LI G G
Sbjct: 153 NESKIKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRG 212
Query: 283 NLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQ 339
+E+AK + K G N+ + +L+ + + G F + ++ + +
Sbjct: 213 EIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYN 272
Query: 340 LVVDRLAKELRVEEA----KELVELGKTNSYCRYN 370
V+++ K+ R ++A E+ E G + + YN
Sbjct: 273 CVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYN 307
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 66/136 (48%), Gaps = 3/136 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHK 156
LI + + E A ++ M V +++ L+ G C+ + +E LFK + K
Sbjct: 414 LIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQ-MNEASRLFKLMVAK 472
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
+EP+ V YNT++ + +GS A L EME+K + ++ ++ ++ + +
Sbjct: 473 -KLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKE 531
Query: 217 AEKIWETMVNMNVRPN 232
AE + E M++ + P+
Sbjct: 532 AEGLVEKMIDTGIDPS 547
>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 680
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 164/340 (48%), Gaps = 24/340 (7%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTN--TGIYTGTVQRLANAKRFRWIEEILEHQK 84
VI I K+ R+ D + +++G + N T YT ++ L A R+ +E+L
Sbjct: 333 VINAICKQG---RVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMV 389
Query: 85 QYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKF 143
+ E I + + + E A K+ + MP C ++++NAL+ G CV +
Sbjct: 390 RKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGR-V 448
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT 203
D LF +LP EP+ ++Y T++ LD+A LL EM +K L+ +TFN
Sbjct: 449 DSALELFNNLP----CEPNTITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNV 504
Query: 204 LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
L+ F G +A ++ M+ PN+ ++N LDG+ + +++ALEL+ + SK
Sbjct: 505 LVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKG 564
Query: 264 INPDVFTFYALIKGFVNEGNLEEAKRWYN-------KSGCGM-NKAIFKLLVPFVCEKGD 315
++ D T+ +++ E EEA + + + GM NK +F L C++ +
Sbjct: 565 VSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFAL-----CKRCE 619
Query: 316 LDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAK 355
D A + S C+ +++ ++++ LA E ++EA+
Sbjct: 620 TDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAR 659
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 141/336 (41%), Gaps = 8/336 (2%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
+I G+ +E + + + S G F+ + YT ++ L A+R+ ++ +
Sbjct: 228 IINGMCREGRVDDAKEILNRLSSYG-FQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDK 286
Query: 87 KDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEV 146
K + E L+ + + M E A +V +M C N ++ A + D+
Sbjct: 287 KCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDA 346
Query: 147 DGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLL 206
++ G PD +SY T+++ G + A LL EM +K + +TFNT +
Sbjct: 347 YDFLNNM-GMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFIC 405
Query: 207 GFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINP 266
G A K+ E M + +YNA + G ++ + ALEL + + P
Sbjct: 406 ILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCE---P 462
Query: 267 DVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLC 323
+ T+ L+ G + L+ A + C +N F +LV F C+KG ++ A L
Sbjct: 463 NTITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELV 522
Query: 324 KRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ C + ++D + K+ EEA EL+
Sbjct: 523 NQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLH 558
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 108/263 (41%), Gaps = 4/263 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+ K++ F A V DEM + C ++++N ++ + D+ + L
Sbjct: 193 LLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRL-SSY 251
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G +PD+VSY T++K D L EM K + +TF+ L+ F G A
Sbjct: 252 GFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERA 311
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ + M PN N ++ + + + A + + M NPD ++ +++G
Sbjct: 312 IQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRG 371
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
G E AK + C N+ F + +C+KG ++ A L + C V
Sbjct: 372 LCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVG 431
Query: 335 QAPLQLVVDRLAKELRVEEAKEL 357
+V + RV+ A EL
Sbjct: 432 IVTYNALVHGFCVQGRVDSALEL 454
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 97/204 (47%), Gaps = 3/204 (1%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G +P +V+Y +++A A +L EM KG +++T+N ++ G GR DA
Sbjct: 182 GCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 241
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++I + + +P++ SY L GL ++ L EM K+ P+ TF L++
Sbjct: 242 KEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRF 301
Query: 278 FVNEGNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
F G +E A + ++ GC N + +++ +C++G +D A++ C D
Sbjct: 302 FCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPD 361
Query: 335 QAPLQLVVDRLAKELRVEEAKELV 358
V+ L + R E AKEL+
Sbjct: 362 TISYTTVLRGLCRAGRWEHAKELL 385
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 120/263 (45%), Gaps = 6/263 (2%)
Query: 103 GKAAMFENA--RKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIE 160
G +A E + R M R C+ +V+++ LL A S F E + ++ K G
Sbjct: 161 GASATAEGSATRSPCSTMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAK-GCT 219
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
P++V+YN II +G +D A +L + G + D++++ T+L G + R+ D + +
Sbjct: 220 PNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVL 279
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
+ MV+ PN +++ + ++A++++ +M P+ +I
Sbjct: 280 FAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICK 339
Query: 281 EGNLEEAKRWYNKSG---CGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAP 337
+G +++A + N G C + + ++ +C G + A L + C ++
Sbjct: 340 QGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVT 399
Query: 338 LQLVVDRLAKELRVEEAKELVEL 360
+ L ++ +E+A +L+EL
Sbjct: 400 FNTFICILCQKGLIEQAIKLIEL 422
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 93/210 (44%), Gaps = 3/210 (1%)
Query: 56 NTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTAR-LIALYGKAAMFENARKV 114
NT YT + L +A+R E+L Q KD T L++ + + E A ++
Sbjct: 463 NTITYTTLLTGLCHAERLDAAAELLAEMIQ-KDCPLNAVTFNVLVSFFCQKGFVEEAMEL 521
Query: 115 FDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFV 174
++M C +++FN LL +E L L K G+ D ++Y++++
Sbjct: 522 VNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSK-GVSLDTITYSSVVDVLS 580
Query: 175 DKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVR 234
+ + A +L+ ++ G+R + +N +L A + MV+ PN
Sbjct: 581 REDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNES 640
Query: 235 SYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+Y ++GLA E K+A ++ E+ +K +
Sbjct: 641 TYIILIEGLAHEGLLKEARYVLSELYAKGV 670
>gi|147772266|emb|CAN67349.1| hypothetical protein VITISV_018089 [Vitis vinifera]
Length = 483
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 164/363 (45%), Gaps = 12/363 (3%)
Query: 1 MSFPSRLL-SCSFSTTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGI 59
+ PS+L + +S + P S+ + + L+ +D F + D G F
Sbjct: 90 IDLPSKLFEAILYSYRICDSSPCVFDSLFKTYAQMKKLRNAIDVFCQMKDYG-FLPRVES 148
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLI-ALYGKAAMFENARKVFDEM 118
+ + +R ++Y+ IS +T ++ + K E A +VF +M
Sbjct: 149 CNAYISASISLQRGDIALTFYREMQRYR-ISPNVYTLNMVMCAFCKWGKLEKAIEVFKKM 207
Query: 119 PGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGS 178
T+ S+N L+ N + L K L K G+ PD V++NT+I F G
Sbjct: 208 ETMGFSPTITSYNTLIAGYCNKGLLNSGMKL-KILMEKNGVRPDDVTFNTLINGFCRGGK 266
Query: 179 LDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNA 238
L AN + EM+ + + IT+NTL+ G+ G ++ + M+ ++ ++ +YNA
Sbjct: 267 LHEANKIFSEMKANDVVPNTITYNTLINGYSQVGNSEMGGRLHDEMLRNGIKADILTYNA 326
Query: 239 RLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSG 295
+ GL +E +TKKA LV E+ + + P+ TF ALI G N E A + Y +SG
Sbjct: 327 LILGLCMEGRTKKAAYLVKELDRENLVPNSSTFSALITGQCVRKNSERAFQLYKSMIRSG 386
Query: 296 CGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAK 355
C N FK+L+ C+ D D A + R SER + AP + L + L + +
Sbjct: 387 CHPNYHTFKMLISTFCKNEDFDGAVEVV-REMSERSI---APDSDTLSELCRGLWLSGKE 442
Query: 356 ELV 358
EL
Sbjct: 443 ELA 445
>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
Length = 564
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 131/272 (48%), Gaps = 9/272 (3%)
Query: 96 ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPH 155
+ LI K + A VFD+M V+++NAL+ + K + + + +
Sbjct: 185 STLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVD 244
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKG-----IRLDLITFNTLLLGFYS 210
K G+ PD+++Y+ ++ AF +D A LL+ M +G + D +TFN L+ G
Sbjct: 245 K-GVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACK 303
Query: 211 NGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
G F A ++E MV N++P+V ++ A +DGL Q + A +++ M + + P+V T
Sbjct: 304 AGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVT 363
Query: 271 FYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTF 327
+ AL+ G G +EEA ++ + SGC + + LV +C D A L
Sbjct: 364 YNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELK 423
Query: 328 SERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
S D ++VD L K + E+A ++E
Sbjct: 424 SFGWDPDTVTYNILVDGLWKSGKTEQAITVLE 455
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 131/274 (47%), Gaps = 11/274 (4%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHK- 156
LI KA E AR++ +M R C V++++ L+ + DE L +++ K
Sbjct: 78 LIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKS 137
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRL--DLITFNTLLLGFYSNGRF 214
+ P++++YN+ + + A L+ + +R+ D +TF+TL+ G G+
Sbjct: 138 CDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQI 197
Query: 215 ADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYAL 274
+A +++ M+ PNV +YNA ++GL + ++A ++ M K + PDV T+ L
Sbjct: 198 DEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVL 257
Query: 275 IKGFVNEGNLEEAKRWYN---KSGCGMN-----KAIFKLLVPFVCEKGDLDFAFNLCKRT 326
+ F ++EA + GC N K F +L+ C+ G+ + A L +
Sbjct: 258 VDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEM 317
Query: 327 FSERCLVDQAPLQLVVDRLAKELRVEEAKELVEL 360
++ D ++D L K +VE A+++++L
Sbjct: 318 VAKNLQPDVMTFGALIDGLCKAGQVEAARDILDL 351
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 105/223 (47%), Gaps = 4/223 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LIA KA FE A +F+EM +N + V++F AL+ + + + + DL L
Sbjct: 297 LIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDIL-DLMGNL 355
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ P++V+YN ++ G ++ A L EM G D IT+ +L+ R DA
Sbjct: 356 GVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDA 415
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ + + P+ +YN +DGL +T++A+ ++ EM K PD FTF A G
Sbjct: 416 LQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSG 475
Query: 278 FVNEGNLE---EAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLD 317
GNL E R G + ++ +VC G LD
Sbjct: 476 LHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLD 518
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/385 (22%), Positives = 158/385 (41%), Gaps = 59/385 (15%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I G+ K N+L ++ F++ + G + Y + L A E ++
Sbjct: 42 TIINGLCKSNDLGAGMELFEELVERGH-HPDVVTYNTLIDSLCKAGDLE------EARRL 94
Query: 86 YKDISKEGFT------ARLIALYGKAAMFENARKVFDEMPGRNCE--QTVLSFNALL-GA 136
+ D+S G + LI K + AR++ EM ++C+ ++++N+ L G
Sbjct: 95 HGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGL 154
Query: 137 CVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRL 196
C S + + + L + PD V+++T+I G +D A ++ +M G
Sbjct: 155 CKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVP 214
Query: 197 DLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELV 256
++IT+N L+ G + A + E+MV+ V P+V +Y+ +D + +ALEL+
Sbjct: 215 NVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELL 274
Query: 257 G----------------------------------------EMRSKEINPDVFTFYALIK 276
EM +K + PDV TF ALI
Sbjct: 275 HGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALID 334
Query: 277 GFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV 333
G G +E A+ + G N + LV +C+ G ++ A + S C+
Sbjct: 335 GLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVP 394
Query: 334 DQAPLQLVVDRLAKELRVEEAKELV 358
D +V L + R ++A +LV
Sbjct: 395 DSITYGSLVYALCRASRTDDALQLV 419
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 115/268 (42%), Gaps = 43/268 (16%)
Query: 149 LFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLL-- 206
+F+ + G+ P +V+YNTII L + L E+ ++G D++T+NTL+
Sbjct: 23 IFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELVERGHHPDVVTYNTLIDSL 82
Query: 207 ---------------------------------GFYSNGRFADAEKIWETMV--NMNVRP 231
G GR +A ++ + M + +V P
Sbjct: 83 CKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLP 142
Query: 232 NVRSYNARLDGLAIEKQTKKALELVGEMR--SKEINPDVFTFYALIKGFVNEGNLEEAKR 289
N+ +YN+ LDGL + T +A EL+ +R S ++PD TF LI G G ++EA
Sbjct: 143 NIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACS 202
Query: 290 WYNKSGCG---MNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLA 346
++ G N + LV +C+ ++ A + + + D ++VD
Sbjct: 203 VFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFC 262
Query: 347 KELRVEEAKELVELGKTNSYCRYNLKFP 374
K RV+EA EL+ G + C N+ P
Sbjct: 263 KASRVDEALELLH-GMASRGCTPNVLVP 289
>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
Length = 649
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 134/270 (49%), Gaps = 8/270 (2%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
F+ A++VF M + V SFN L+G + E +K++ H+ + PD+VS++
Sbjct: 243 FDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRY-VTPDVVSFS 301
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
+I F +G +D A L EM+ G+ D + + ++ GF G ++A ++ + MV
Sbjct: 302 CLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGF 361
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
P+V +YN L+GL + + A +L+ EM + + PD+ TF LI G+ +GN E A
Sbjct: 362 GCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENA 421
Query: 288 KRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDR 344
+ ++ + + + L+ +C KGDL A L + L + +++D
Sbjct: 422 LQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDS 481
Query: 345 LAKELRVEEA----KELVELGKTNSYCRYN 370
++ +VE+A E+V+ G + YN
Sbjct: 482 HCEKGQVEDAFGFLDEMVKKGNLPNIRTYN 511
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 141/279 (50%), Gaps = 8/279 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+A+ +A A++ + + + E + N ++ + + +FD D + ++ K
Sbjct: 128 LLAVLSRAGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEM-EKR 186
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
+ PD+V++N +I A G +D+A L+ M +G++ ++T+N++L G + RF A
Sbjct: 187 CVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKA 246
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++++ TM +V P+VRS+N + G + K+A++ EM+ + + PDV +F LI
Sbjct: 247 KEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGL 306
Query: 278 FVNEGNLEEAKRWYNK-SGCGM--NKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
F G ++ A + + G G+ + I+ +++ C G + A + CL D
Sbjct: 307 FSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPD 366
Query: 335 QAPLQLVVDRLAKELRVEEAKELV----ELGKTNSYCRY 369
+++ L K+ R+ +A++L+ E G T C +
Sbjct: 367 VVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTF 405
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 129/268 (48%), Gaps = 14/268 (5%)
Query: 26 SVIRGIYKENNLK------RLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEI 79
SV++G+ K R +D+ + D+ F I G R+ K +
Sbjct: 232 SVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSF----NILIGGFCRVGEVKEAVKFYKE 287
Query: 80 LEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
++H+ D+ F+ LI L+ + ++A EM G + + ++G
Sbjct: 288 MQHRYVTPDVVS--FSC-LIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCR 344
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
+ E + +D G PD+V+YNT++ + L A LL EME++G+ DL
Sbjct: 345 AGSMSEALRV-RDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLC 403
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
TF TL+ G+ G F +A ++++T++ +RP+V +YN+ +DG+ + KA EL +M
Sbjct: 404 TFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDM 463
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLEEA 287
++EI P+ T+ LI +G +E+A
Sbjct: 464 HAREILPNHITYSILIDSHCEKGQVEDA 491
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 112/225 (49%), Gaps = 7/225 (3%)
Query: 77 EEILEHQKQYKDISKEGFT------ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSF 130
+L+ +K ++ + G T LI Y + FENA ++FD + + V+++
Sbjct: 381 HRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTY 440
Query: 131 NALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEME 190
N+L+ + + L+ D+ H I P+ ++Y+ +I + +KG ++ A L EM
Sbjct: 441 NSLIDGMCRKGDLAKANELWDDM-HAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMV 499
Query: 191 KKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTK 250
KKG ++ T+N+++ G+ +G ++ + M NV P++ ++N + G E+
Sbjct: 500 KKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMH 559
Query: 251 KALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSG 295
A + M + + PD T+ +I GF +GN+++A R + G
Sbjct: 560 GAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMG 604
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 84/170 (49%), Gaps = 1/170 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + + E+A DEM + + ++N+++ S + + +
Sbjct: 478 LIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQD- 536
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
+ PDL+++NT+I ++ + ++ A + MEK+ +R D +T+N ++ GF G DA
Sbjct: 537 NVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDA 596
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPD 267
++++ M + + P+ +Y + ++G +K+A +L EM + PD
Sbjct: 597 GRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAPD 646
>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Vitis vinifera]
Length = 666
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 159/383 (41%), Gaps = 52/383 (13%)
Query: 24 IGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQ 83
IGS R E LK F + D R + IY + L + RF+ I I
Sbjct: 118 IGSYRRAGSSEQALK----TFYRMQDF-RVKPTVKIYNHILDALLDENRFQMINPI---- 168
Query: 84 KQYKDISKEGFTAR------LIALYGKAAMFENARKVFDEMPGRNCEQ------------ 125
Y ++ K+G L+ K + A K+ EM + C+
Sbjct: 169 --YSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSL 226
Query: 126 ------------------TVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
+V +NAL+ F+E L ++ +K GI+P+++SY
Sbjct: 227 CKLGKVKEARELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNK-GIDPNVISYT 285
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
TII A D G+++ + +L +M +G +L TF +L+ GF+ G +A W+ M+
Sbjct: 286 TIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIRE 345
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLE-- 285
V PNV +YNA + GL ++ A+ + +M P+V T+ ALI G+ G+L+
Sbjct: 346 GVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGA 405
Query: 286 -EAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDR 344
E W GC N + +V +C + A+ L + E C + +
Sbjct: 406 SEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKG 465
Query: 345 LAKELRVEEA-KELVELGKTNSY 366
L RV+ A K ++G + +
Sbjct: 466 LCGSGRVDWAIKVFDQMGNSGCF 488
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 94/174 (54%), Gaps = 2/174 (1%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A KVFD+M C ++N LL + + ++F E GL KD+ H+ GIE +LV+YNTII
Sbjct: 475 AIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHR-GIELNLVTYNTII 533
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
+ G L A LL +M +G + D IT N ++ + G+ A ++ + +
Sbjct: 534 YGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWH 593
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG-FVNEGN 283
P++ +Y + + G+ ++A+ + M S+ I+P+V T+ L++ F N G+
Sbjct: 594 PDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMGH 647
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 102/213 (47%), Gaps = 4/213 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
++ + + +MF A + + M NC ++FN + S + D +F + +
Sbjct: 427 MVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNS- 485
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G P+ +YN ++ + + A L+ +ME +GI L+L+T+NT++ G+ G +A
Sbjct: 486 GCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEA 545
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ MV +P+ + N +D + + A++L+ + + + +PD+ + +LI G
Sbjct: 546 LELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISG 605
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLV 307
+EEA + + G N A + +LV
Sbjct: 606 ICTHIGVEEAIVYLRRMLSEGISPNVATWNVLV 638
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 111/248 (44%), Gaps = 4/248 (1%)
Query: 110 NARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTI 169
+A VF++M C V +++AL+ + D ++ + G P++V+Y +
Sbjct: 369 DAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITH-GCHPNVVAYTCM 427
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
+ + A L+ M+ + + +TFNT + G +GR A K+++ M N
Sbjct: 428 VDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGC 487
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
PN +YN LD L +++ +A LV +M + I ++ T+ +I G+ G L EA
Sbjct: 488 FPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALE 547
Query: 290 WYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLA 346
K G + +++ C++G ++ A L R + + D ++ +
Sbjct: 548 LLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGIC 607
Query: 347 KELRVEEA 354
+ VEEA
Sbjct: 608 THIGVEEA 615
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 96/213 (45%), Gaps = 8/213 (3%)
Query: 150 FKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFY 209
FK + + + ++Y +I+ + +D LL +M+ +GI F +++ +
Sbjct: 63 FKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYR 122
Query: 210 SNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVF 269
G A K + M + V+P V+ YN LD L E + + + M+ + P+VF
Sbjct: 123 RAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVF 182
Query: 270 TFYALIKGFVNEGNLEEAKRW---YNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRT 326
T+ L+K ++ A + + GC ++ + L+ +C+ G + A L +
Sbjct: 183 TYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEAREL-AMS 241
Query: 327 FSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
F+ V A +++ + KE EEA +L++
Sbjct: 242 FTPSVPVYNA----LINGVCKEYTFEEAFQLLD 270
>gi|224064580|ref|XP_002301519.1| predicted protein [Populus trichocarpa]
gi|222843245|gb|EEE80792.1| predicted protein [Populus trichocarpa]
Length = 718
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 135/270 (50%), Gaps = 8/270 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+A+ K ++E AR + EM R +Q + ++N LL A + D + ++P K
Sbjct: 189 LLAVCSKGGLWEAARSLSCEMVNRGIDQDIFTYNTLLDAVCKGGQLDMAFEIMSEMPAK- 247
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
I P++V+Y+T+I + G LD A L EM+ GI LD +++NTLL + GRF +A
Sbjct: 248 NILPNVVTYSTMIDGYAKAGRLDDARNLFNEMKFLGISLDRVSYNTLLSIYAKLGRFEEA 307
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ M N +R +V +YNA L G + + ++ EM+++ ++P++ T+ LI
Sbjct: 308 MDVCREMENSGIRKDVVTYNALLGGYGKQYKYDVVRKVFEEMKARHVSPNLLTYSTLIDV 367
Query: 278 FVNEGNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
+ G EA R + K+G + ++ L+ +C+ G ++ A +L E +
Sbjct: 368 YSKGGLYREAMDVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 427
Query: 335 QAPLQLVVDRLAK----ELRVEEAKELVEL 360
++D + E V++A + EL
Sbjct: 428 VVTYNSIIDAFGRPATTESVVDDAGQTSEL 457
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 117/236 (49%), Gaps = 7/236 (2%)
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
+ +I+ G+ E A+ VF TV +F+A++ A S +E +F +
Sbjct: 79 LASAMISTLGRLGKVEMAKTVFKAALTEGYGNTVYAFSAIISAYGRSGYCNEAIKIFYSM 138
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTL--LYEMEKKGIRLDLITFNTLLLGFYSN 211
G++P+LV+YN +I A KG ++ L EM + G++ D ITFN+LL
Sbjct: 139 K-DYGLKPNLVTYNAVIDA-CGKGGVEFKRVLEIFDEMLRNGMQPDRITFNSLLAVCSKG 196
Query: 212 GRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTF 271
G + A + MVN + ++ +YN LD + Q A E++ EM +K I P+V T+
Sbjct: 197 GLWEAARSLSCEMVNRGIDQDIFTYNTLLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTY 256
Query: 272 YALIKGFVNEGNLEEAKRWYNKS---GCGMNKAIFKLLVPFVCEKGDLDFAFNLCK 324
+I G+ G L++A+ +N+ G +++ + L+ + G + A ++C+
Sbjct: 257 STMIDGYAKAGRLDDARNLFNEMKFLGISLDRVSYNTLLSIYAKLGRFEEAMDVCR 312
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 86/169 (50%), Gaps = 1/169 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+++Y K FE A V EM + V+++NALLG K+D V +F+++ +
Sbjct: 294 LLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALLGGYGKQYKYDVVRKVFEEMKAR- 352
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
+ P+L++Y+T+I + G A + E +K G++ D++ ++ L+ NG A
Sbjct: 353 HVSPNLLTYSTLIDVYSKGGLYREAMDVFREFKKAGLKADVVLYSALIDALCKNGLVESA 412
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINP 266
+ + M +RPNV +YN+ +D T+ ++ G+ +I+
Sbjct: 413 VSLLDEMTKEGIRPNVVTYNSIIDAFGRPATTESVVDDAGQTSELQIDS 461
>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 148/293 (50%), Gaps = 7/293 (2%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I G+ K ++ ++ FK+ G R N Y+ + L N R+ +L +
Sbjct: 261 TIIDGLCKNKHMDDALNLFKEMETKG-IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE 319
Query: 86 YKDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
K I+ + FT + LI + K A K++DEM R+ + +++++++L+ + D
Sbjct: 320 RK-INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD 378
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
E +F+ + K PD+VSY+T+IK F +D L EM ++G+ + +T+ TL
Sbjct: 379 EAKQMFEFMVSKHCF-PDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTL 437
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+ G + G A++I++ MV+ V PN+ +YN LDGL + +KA+ + ++ ++
Sbjct: 438 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 497
Query: 265 NPDVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKG 314
P ++T+ +I+G G +E+ + + G + + ++ C KG
Sbjct: 498 EPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKG 550
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 122/265 (46%), Gaps = 4/265 (1%)
Query: 96 ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPH 155
+ L+ Y + A + D+M + ++FN L+ K E L +
Sbjct: 155 SSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVA 214
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
K G +PDLV+Y ++ +G D A LL +ME+ + ++ + T++ G N
Sbjct: 215 K-GCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMD 273
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
DA +++ M +RPNV +Y++ + L + A L+ +M ++INPDVFTF ALI
Sbjct: 274 DALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALI 333
Query: 276 KGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCL 332
FV EG L EA++ Y+ K + + L+ C LD A + + S+ C
Sbjct: 334 DAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF 393
Query: 333 VDQAPLQLVVDRLAKELRVEEAKEL 357
D ++ K RV+E EL
Sbjct: 394 PDVVSYSTLIKGFCKAKRVDEGMEL 418
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 107/220 (48%), Gaps = 4/220 (1%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
++A +F EM +++ F+ LL A KFD V L + + LG+ + +Y+
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQM-QNLGMPHNHYTYS 120
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
+I F + L A +L +M K G +++T ++LL G+ + R ++A + + M
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+PN ++N + GL + + +A+ L+ M +K PD+ T+ ++ G G+ + A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 288 KRWYNKSGCGMNKA---IFKLLVPFVCEKGDLDFAFNLCK 324
NK G + I+ ++ +C+ +D A NL K
Sbjct: 241 FILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFK 280
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 114/252 (45%), Gaps = 8/252 (3%)
Query: 42 DKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTAR---- 97
D+ ++ + F + + V K F + + E + ++++S+ G
Sbjct: 375 DRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTY 434
Query: 98 --LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPH 155
LI +A + A+++F EM ++++N LL + K ++ +F+ L
Sbjct: 435 TTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL-Q 493
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
+ +EP + +YN +I+ G ++ L + KG++ D++ +NT++ GF G
Sbjct: 494 RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKE 553
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
+A+ +++ M PN YN + + + + EL+ EMRS D T L+
Sbjct: 554 EADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI-GLV 612
Query: 276 KGFVNEGNLEEA 287
+++G L+++
Sbjct: 613 TNMLHDGRLDKS 624
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 70/172 (40%), Gaps = 3/172 (1%)
Query: 179 LDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNA 238
LD A L EM K +I F+ LL +F + E M N+ + N +Y+
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSI 121
Query: 239 RLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SG 295
++ Q AL ++G+M P++ T +L+ G+ + + EA ++ +G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 296 CGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAK 347
N F L+ + A L R ++ C D +VV+ L K
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCK 233
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 128/247 (51%), Gaps = 4/247 (1%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A + +M E V+ +N ++ K D+ LF + K GI+PD+ +YN++I
Sbjct: 240 ALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETK-GIKPDVFTYNSLI 298
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
+ G A+ LL +M ++ I +++TFN+L+ F G+ +AEK+++ M+ ++
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSID 358
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK-- 288
PN+ +YN+ ++G + + +A ++ M SK+ PDV T+ LIKGF +EE
Sbjct: 359 PNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMEL 418
Query: 289 -RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAK 347
R ++ G N + L+ + + GD D A + K+ S+ D +++D L K
Sbjct: 419 FREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK 478
Query: 348 ELRVEEA 354
++E+A
Sbjct: 479 YGKLEKA 485
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 141/292 (48%), Gaps = 5/292 (1%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I G+ K ++ D F K G + + Y + L N R+ +L +
Sbjct: 261 TIIDGLCKYKHMDDAFDLFNKMETKG-IKPDVFTYNSLISCLCNYGRWSDASRLLSDMIE 319
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
K LI + K A K+FDEM R+ + ++++N+L+ + DE
Sbjct: 320 RKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDE 379
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
+F + K + PD+V+YNT+IK F ++ L EM ++G+ + +T+NTL+
Sbjct: 380 AQQIFTLMVSKDCL-PDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLI 438
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEIN 265
G + G A+KI++ MV+ V P++ +Y+ LDGL + +KAL + ++ ++
Sbjct: 439 QGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME 498
Query: 266 PDVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKG 314
P+++T+ +I+G G +E+ + + G N I+ ++ C KG
Sbjct: 499 PNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKG 550
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 121/265 (45%), Gaps = 4/265 (1%)
Query: 96 ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPH 155
+ L+ Y A + D+M + ++FN L+ K E L +
Sbjct: 155 SSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVA 214
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
+ G +PDL +Y T++ +G +D A +LL +MEK I +++ +NT++ G
Sbjct: 215 R-GCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMD 273
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
DA ++ M ++P+V +YN+ + L + A L+ +M ++INP+V TF +LI
Sbjct: 274 DAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLI 333
Query: 276 KGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCL 332
F EG L EA++ ++ + N + L+ C LD A + S+ CL
Sbjct: 334 DAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCL 393
Query: 333 VDQAPLQLVVDRLAKELRVEEAKEL 357
D ++ K RVEE EL
Sbjct: 394 PDVVTYNTLIKGFCKAKRVEEGMEL 418
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 109/218 (50%), Gaps = 4/218 (1%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
++A +F EM +++ F+ LL A KFD V L + + LGI + +Y+
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQM-QNLGIPHNHYTYS 120
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
++ F + L A +L +M K G D++T ++LL G+ R ++A + + MV M
Sbjct: 121 ILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEM 180
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+P+ ++N + GL + + +A+ L+ M ++ PD+FT+ ++ G G+++ A
Sbjct: 181 GYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 240
Query: 288 KRWYNKSGCG---MNKAIFKLLVPFVCEKGDLDFAFNL 322
K G N I+ ++ +C+ +D AF+L
Sbjct: 241 LSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDL 278
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 116/241 (48%), Gaps = 4/241 (1%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
+ A+++F M ++C V+++N L+ +K+ +E LF+++ + G+ + V+YN
Sbjct: 377 LDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQR-GLVGNTVTYN 435
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
T+I+ G D A + +M G+ D+IT++ LL G G+ A ++E +
Sbjct: 436 TLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS 495
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+ PN+ +YN ++G+ + + +L + K + P+V + +I GF +G EEA
Sbjct: 496 KMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEA 555
Query: 288 K---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDR 344
R + G + + L+ GD + L K S + D + + +V++
Sbjct: 556 DALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINM 615
Query: 345 L 345
L
Sbjct: 616 L 616
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 84/217 (38%), Gaps = 38/217 (17%)
Query: 179 LDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNA 238
LD A L EM K +I F+ LL +F + E M N+ + N +Y+
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 239 RLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR--------- 289
L+ Q AL ++G+M PD+ T +L+ G+ + + EA
Sbjct: 122 LLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMG 181
Query: 290 ----------------WYNKS-------------GCGMNKAIFKLLVPFVCEKGDLDFAF 320
+NK+ GC + + +V +C++GD+D A
Sbjct: 182 YKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 241
Query: 321 NLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
+L K+ + + ++D L K +++A +L
Sbjct: 242 SLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDL 278
>gi|225447562|ref|XP_002269867.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Vitis vinifera]
Length = 616
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 99/366 (27%), Positives = 166/366 (45%), Gaps = 18/366 (4%)
Query: 1 MSFPSRLL-SCSFSTTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLG---RFRTN 56
+ PS+L + +S + P S+ + + L+ +D F + D G R +
Sbjct: 223 IDHPSKLFEAILYSYRICDSSPCVFDSLFKTYAQMKKLRNAIDVFCQMKDYGFLPRVESC 282
Query: 57 TGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLI-ALYGKAAMFENARKVF 115
+ ++ + E+ ++Y+ IS +T ++ + K E A +VF
Sbjct: 283 NAYISASISLQRGDIALTFYREM----QRYR-ISPNVYTLNMVMCAFCKWGKLEKAIEVF 337
Query: 116 DEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVD 175
M T+ S+N L+ N + L K L K G+ PD V++NT+I F
Sbjct: 338 KRMETMGFSPTITSYNTLIAGYCNKGLLNSGMKL-KILMEKNGVRPDDVTFNTLINGFCR 396
Query: 176 KGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRS 235
G L AN + EM+ + + IT+NTL+ G+ G ++ + M+ ++ ++ +
Sbjct: 397 GGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQVGNSEMGGRLHDEMLRNGIKADILT 456
Query: 236 YNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN--- 292
YNA + GL +E +TKKA LV E+ + + P+ TF ALI G N E A + Y
Sbjct: 457 YNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTFSALITGQCVRKNSERAFQLYKSMI 516
Query: 293 KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVE 352
+SGC N FK+L+ C+ D D A + R SER + AP + L + L +
Sbjct: 517 RSGCHPNYHTFKMLISTFCKNEDFDGAVEVV-REMSERSI---APDSDTLSELCRGLWLS 572
Query: 353 EAKELV 358
+EL
Sbjct: 573 GKEELA 578
>gi|297723459|ref|NP_001174093.1| Os04g0618050 [Oryza sativa Japonica Group]
gi|222629567|gb|EEE61699.1| hypothetical protein OsJ_16179 [Oryza sativa Japonica Group]
gi|255675780|dbj|BAH92821.1| Os04g0618050 [Oryza sativa Japonica Group]
Length = 363
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 137/284 (48%), Gaps = 5/284 (1%)
Query: 40 LVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLI 99
+ FK++ D ++ N +Y+ + RLA+ +RF +EE+L + + + F RLI
Sbjct: 54 ITSSFKRACDRRDYKPNEALYSMMIDRLASCRRFSDVEELLARARAERFRFSDEFFYRLI 113
Query: 100 ALYGKAAMF-ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLG 158
+YG A E A + MPG NC + +FN +L V ++++ V ++ +LG
Sbjct: 114 KMYGNVANHPEKAIETLFAMPGYNCWPSTKTFNYVLHMLVCKRQYEVVHEVYLS-ASRLG 172
Query: 159 IEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAE 218
+ D +N ++K G A +LLYEM K+G ++ T++TL+ +G+ A
Sbjct: 173 VTLDTCCFNILVKGLCQFGKFGDAISLLYEMPKQGCVPNVTTYSTLMNFLCQHGQVDKAF 232
Query: 219 KIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGF 278
++ E M ++ + YN + GL E++ +A L M K P+ T+ L+ G
Sbjct: 233 ELCERMQKEDIVADAVVYNILIAGLCREQRVTEAFNLFKSMVPKGCYPNSGTYQVLLDGL 292
Query: 279 VNEGNLEEAKRWYNKSGCGMNK---AIFKLLVPFVCEKGDLDFA 319
++ G EAK + + + FKLL+ +C LD A
Sbjct: 293 LSSGKFVEAKGLVSMMRAERMRPGFSSFKLLIDGLCSVNCLDDA 336
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 95/244 (38%), Gaps = 8/244 (3%)
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL 179
GR + LS N LL N + + FK + +P+ Y+ +I
Sbjct: 28 GRLDHKDWLSPNELLKIFANIRDPSLITSSFKRACDRRDYKPNEALYSMMIDRLASCRRF 87
Query: 180 DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM---NVRPNVRSY 236
LL + R F L+ Y N EK ET+ M N P+ +++
Sbjct: 88 SDVEELLARARAERFRFS-DEFFYRLIKMYGNVA-NHPEKAIETLFAMPGYNCWPSTKTF 145
Query: 237 NARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW---YNK 293
N L L ++Q + E+ + D F L+KG G +A K
Sbjct: 146 NYVLHMLVCKRQYEVVHEVYLSASRLGVTLDTCCFNILVKGLCQFGKFGDAISLLYEMPK 205
Query: 294 SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEE 353
GC N + L+ F+C+ G +D AF LC+R E + D +++ L +E RV E
Sbjct: 206 QGCVPNVTTYSTLMNFLCQHGQVDKAFELCERMQKEDIVADAVVYNILIAGLCREQRVTE 265
Query: 354 AKEL 357
A L
Sbjct: 266 AFNL 269
>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Cucumis sativus]
Length = 749
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 141/280 (50%), Gaps = 15/280 (5%)
Query: 99 IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEV-DGLFKDLPHKL 157
+ L KA N K + MPG VLS+NA+L A + +K+ ++ +G+FK++
Sbjct: 145 VNLINKALSIVNLAKSYGFMPG------VLSYNAILDAVIRTKQSVKIAEGIFKEMVES- 197
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ P++ +YN +I+ F G+L+ EME+ G +++T+NT++ + + +A
Sbjct: 198 GVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEA 257
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
K+ M + PN+ SYN ++GL E Q K+ E++ EM + PD TF LI G
Sbjct: 258 FKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLING 317
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
+ N GN +A + K+G N + L+ +C+ G+L+ A + +
Sbjct: 318 YCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPN 377
Query: 335 QAPLQLVVDRLAKELRVEEA----KELVELGKTNSYCRYN 370
++D +++ +++A KE+VE G T + YN
Sbjct: 378 GRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYN 417
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 117/236 (49%), Gaps = 5/236 (2%)
Query: 56 NTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFT-ARLIALYGKAAMFENARKV 114
N YT + + A E L+ + + + G T LI + + + A ++
Sbjct: 342 NVVTYTTLINSMCKAGNLNRAMEFLDQMRD-RGLHPNGRTYTTLIDGFSQQGFLKQAYQI 400
Query: 115 FDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAF 173
EM T++++NAL+ G C+ + ++ GL +++ + G PD+VSY+TII F
Sbjct: 401 MKEMVENGFTPTIITYNALINGHCI-LGRMEDASGLLQEMIER-GFIPDVVSYSTIISGF 458
Query: 174 VDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNV 233
L+ A L EM KGI D+ T+++L+ G R + +++ M+++ + P+
Sbjct: 459 CRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDE 518
Query: 234 RSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
+Y + ++ IE KAL L EM K +PD+ T+ LI GF + +EAKR
Sbjct: 519 VTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKR 574
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 132/280 (47%), Gaps = 34/280 (12%)
Query: 96 ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPH 155
+ +I+ + + E A ++ EM + V ++++L+ ++ EV LF+++
Sbjct: 452 STIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEML- 510
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
LG+ PD V+Y ++I A+ +G LD A L EM +KG D++T+N L+ GF R
Sbjct: 511 SLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTK 570
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
+A+++ ++ PN +YN +D + K AL AL+
Sbjct: 571 EAKRLLLKLLYEESVPNEITYNTLIDNCN-NLEFKSAL-------------------ALM 610
Query: 276 KGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCL 332
KGF +G + EA R + G +N+ ++ +++ + G+++ A+NL K
Sbjct: 611 KGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHS--- 667
Query: 333 VDQAPLQLVVDRLAKELRVEEAKELVELGKTNSY----CR 368
AP + + LAK L E KE VEL + Y CR
Sbjct: 668 -GFAPHSVTIMALAKSL-YHEGKE-VELNQLLDYTLKSCR 704
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 126/269 (46%), Gaps = 6/269 (2%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
VI G+ +E +K + ++ S R+ + + + N F + ++ H +
Sbjct: 279 VINGLCREGQMKETSEILEEMSK-RRYVPDRVTFNTLINGYCNVGNFH--QALVLHAEMV 335
Query: 87 KD-ISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
K+ +S T LI KA A + D+M R ++ L+
Sbjct: 336 KNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLK 395
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
+ + K++ G P +++YN +I G ++ A+ LL EM ++G D+++++T+
Sbjct: 396 QAYQIMKEMVEN-GFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTI 454
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+ GF N A ++ MV + P+V +Y++ + GL +++ + +L EM S +
Sbjct: 455 ISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGL 514
Query: 265 NPDVFTFYALIKGFVNEGNLEEAKRWYNK 293
PD T+ +LI + EG+L++A R +++
Sbjct: 515 PPDEVTYTSLINAYCIEGDLDKALRLHDE 543
>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
[Vitis vinifera]
Length = 2037
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 154/327 (47%), Gaps = 20/327 (6%)
Query: 57 TGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTAR----------------LIA 100
T +Y T L A+ + + IL H Q SK F A LI
Sbjct: 863 THMYCLTAHILVKARMYDSAKSILRHLCQMGIGSKSIFGALMDTYPLCNSIPSVFDLLIR 922
Query: 101 LYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIE 160
+Y K M + A + F+ + + +V + N +L + V K+ + V LF+++ K GI
Sbjct: 923 VYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDK-GIC 981
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
P++ ++N +I +G+L A LL +ME+ G ++T+NTLL + GR+ A ++
Sbjct: 982 PNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIEL 1041
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
+ M+ + +V +YN +D L ++ KA L+ +MR + I+P+ T+ LI GFV
Sbjct: 1042 IDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVK 1101
Query: 281 EGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAP 337
EG + A + +N K N + L+ C GD + A L + +++
Sbjct: 1102 EGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVT 1161
Query: 338 LQLVVDRLAKELRVEEAKELVELGKTN 364
+++ L K + E AK L+E + N
Sbjct: 1162 YGTLLNGLCKHEKFELAKRLLERMRVN 1188
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 143/318 (44%), Gaps = 49/318 (15%)
Query: 87 KDISKEGFTARLIAL------YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNS 140
K + + GF ++ Y K ++ A ++ D M + E V ++N + +
Sbjct: 1008 KQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTN 1067
Query: 141 KKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL--------------------- 179
+ + L K + ++ I P+ V+YNT+I FV +G +
Sbjct: 1068 HRSAKAYLLLKKMRKEM-ISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVT 1126
Query: 180 --------------DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM- 224
+ A LL ME G+RL+ +T+ TLL G + +F A+++ E M
Sbjct: 1127 YNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMR 1186
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
VN V ++ +Y +DGL +A++LVG M +NPDV T+ +LI GF GN+
Sbjct: 1187 VNDMVVGHI-AYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNI 1245
Query: 285 EEAK----RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL 340
+ AK R Y +SG +NK I+ L+ C+ G++ A + D +
Sbjct: 1246 KSAKEIICRMY-RSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNV 1304
Query: 341 VVDRLAKELRVEEAKELV 358
+V L ++ ++ EA++ +
Sbjct: 1305 LVSSLCRDGKLGEAEKFL 1322
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/349 (20%), Positives = 137/349 (39%), Gaps = 42/349 (12%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I G KE + F + S N Y + + F +L+H +
Sbjct: 1094 TLINGFVKEGKIGVAAQVFNEMSKF-DLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEA 1152
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
E L+ K FE A+++ + M + +++ L+ + DE
Sbjct: 1153 AGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDE 1212
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
L ++ +K G+ PD+++Y+++I F G++ SA ++ M + G+ L+ I ++TL+
Sbjct: 1213 AVQLVGNM-YKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLI 1271
Query: 206 LGFYSNGRFADAEKIWETM-----------------------------------VNMNVR 230
F +G +A K++ M + +
Sbjct: 1272 YNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLV 1331
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
PN +Y+ ++G A +M +P FT+ +L+KG GNL EAK++
Sbjct: 1332 PNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKF 1391
Query: 291 YNK----SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQ 335
N+ G ++ ++ L+ C+ G+L A L + L D
Sbjct: 1392 LNRLHYIPG-AVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDS 1439
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 97/229 (42%), Gaps = 5/229 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHK 156
L+A K+ A +FD+M N ++++LL G C K V LF +
Sbjct: 1410 LLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAV-CLFGTAMGR 1468
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
+ P+ V Y ++ G +A EM KKG D + FN ++ G+
Sbjct: 1469 GTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMK 1528
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
A + TM V PN+ +YN L G + ++ + L L M + I PD TF++LI
Sbjct: 1529 ANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLIL 1588
Query: 277 GFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
G G + + K G ++ F +L+ E G + AF+L
Sbjct: 1589 GLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDL 1637
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 100/226 (44%), Gaps = 7/226 (3%)
Query: 43 KFKKSSDLGRFRTNTGI------YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTA 96
K +K+ DL F G+ Y L FR +L + I K
Sbjct: 1630 KMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYI 1689
Query: 97 RLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHK 156
LI + + A K+ DEM ++ +A++ ++ K ++ L D +
Sbjct: 1690 TLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDA-MLVLDHMLR 1748
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
+ + P + ++ T++ F + A L ME G++LD++ +N L++G +NG A
Sbjct: 1749 MRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAA 1808
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
A +++E M + ++ PN+ +Y +D ++ + +L+ +++ +
Sbjct: 1809 AFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQER 1854
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 85/189 (44%), Gaps = 7/189 (3%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSK-KFDEVDGLFK--DLPHKLGIE 160
K + F + V EM E V+ +A +N + ++ G FK D LG
Sbjct: 1662 KKSAFRESTVVLHEM----LENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFG 1717
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
V+ + +++ + G + A +L M + + + TF TL+ F + + A+A K+
Sbjct: 1718 SHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKL 1777
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
M ++ +V +YN + G+ + A EL EMR +++ P++ T+ L+
Sbjct: 1778 KGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISA 1837
Query: 281 EGNLEEAKR 289
NL + ++
Sbjct: 1838 ANNLIQGEK 1846
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 69/339 (20%), Positives = 138/339 (40%), Gaps = 12/339 (3%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKR----FRWIEEILE 81
S++ G+ ++ V F + G N +YT V L+ A F + EE+++
Sbjct: 1444 SLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMK 1503
Query: 82 HQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSK 141
++ F A + + + M + A F M + ++N LL +
Sbjct: 1504 KGTCPDTVA---FNAIIDSCSRRGQMMK-ANDFFSTMRWWGVCPNLATYNILLHGFSKKQ 1559
Query: 142 KFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITF 201
L+ + + GI PD ++++++I G D LL +M +G D TF
Sbjct: 1560 ALLRYLSLYSTMMRE-GIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTF 1618
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS 261
N L+ + +G+ A + M + V P+ +YN +GL + +++ ++ EM
Sbjct: 1619 NILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLE 1678
Query: 262 KEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS---GCGMNKAIFKLLVPFVCEKGDLDF 318
+ P + LI G G+++ A + ++ G G ++ +V + G +
Sbjct: 1679 NGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTED 1738
Query: 319 AFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
A + R L A ++ R ++ ++ EA +L
Sbjct: 1739 AMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKL 1777
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 61/133 (45%), Gaps = 1/133 (0%)
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
K G P +Y +++K G+L A L + +D + +NTLL +G
Sbjct: 1362 KCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLH 1421
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG-EMRSKEINPDVFTFYAL 274
+A +++ MV NV P+ +Y++ L GL + + A+ L G M + P+ + L
Sbjct: 1422 EAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCL 1481
Query: 275 IKGFVNEGNLEEA 287
+ G G+ + A
Sbjct: 1482 VDGLSKAGHPKAA 1494
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 55/134 (41%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ P Y T+I G + A L EME G + + ++ G G+ DA
Sbjct: 1680 GVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDA 1739
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ + M+ M + P + ++ + + + +AL+L G M + DV + LI G
Sbjct: 1740 MLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMG 1799
Query: 278 FVNEGNLEEAKRWY 291
G+ A Y
Sbjct: 1800 MCANGDSAAAFELY 1813
>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
Length = 1356
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 154/327 (47%), Gaps = 20/327 (6%)
Query: 57 TGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTAR----------------LIA 100
T +Y T L A+ + + IL H Q SK F A LI
Sbjct: 112 THMYCLTAHILVKARMYDSAKSILRHLCQMGIGSKSIFGALMDTYPLCNSIPSVFDLLIR 171
Query: 101 LYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIE 160
+Y K M + A + F+ + + +V + N +L + V K+ + V LF+++ K GI
Sbjct: 172 VYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDK-GIC 230
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
P++ ++N +I +G+L A LL +ME+ G ++T+NTLL + GR+ A ++
Sbjct: 231 PNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIEL 290
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
+ M+ + +V +YN +D L ++ KA L+ +MR + I+P+ T+ LI GFV
Sbjct: 291 IDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVK 350
Query: 281 EGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAP 337
EG + A + +N K N + L+ C GD + A L + +++
Sbjct: 351 EGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVT 410
Query: 338 LQLVVDRLAKELRVEEAKELVELGKTN 364
+++ L K + E AK L+E + N
Sbjct: 411 YGTLLNGLCKHEKFELAKRLLERMRVN 437
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 143/318 (44%), Gaps = 49/318 (15%)
Query: 87 KDISKEGFTARLIA------LYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNS 140
K + + GF ++ Y K ++ A ++ D M + E V ++N + +
Sbjct: 257 KQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTN 316
Query: 141 KKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL--------------------- 179
+ + L K + ++ I P+ V+YNT+I FV +G +
Sbjct: 317 HRSAKAYLLLKKMRKEM-ISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVT 375
Query: 180 --------------DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM- 224
+ A LL ME G+RL+ +T+ TLL G + +F A+++ E M
Sbjct: 376 YNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMR 435
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
VN V ++ +Y +DGL +A++LVG M +NPDV T+ +LI GF GN+
Sbjct: 436 VNDMVVGHI-AYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNI 494
Query: 285 EEAK----RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL 340
+ AK R Y +SG +NK I+ L+ C+ G++ A + D +
Sbjct: 495 KSAKEIICRMY-RSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNV 553
Query: 341 VVDRLAKELRVEEAKELV 358
+V L ++ ++ EA++ +
Sbjct: 554 LVSSLCRDGKLGEAEKFL 571
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/348 (20%), Positives = 136/348 (39%), Gaps = 40/348 (11%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I G KE + F + S N Y + + F +L+H +
Sbjct: 343 TLINGFVKEGKIGVAAQVFNEMSKF-DLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEA 401
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
E L+ K FE A+++ + M + +++ L+ + DE
Sbjct: 402 AGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDE 461
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
L ++ +K G+ PD+++Y+++I F G++ SA ++ M + G+ L+ I ++TL+
Sbjct: 462 AVQLVGNM-YKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLI 520
Query: 206 LGFYSNGRFADAEKIWETM-----------------------------------VNMNVR 230
F +G +A K++ M + +
Sbjct: 521 YNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLV 580
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
PN +Y+ ++G A +M +P FT+ +L+KG GNL EAK++
Sbjct: 581 PNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKF 640
Query: 291 YNKSG---CGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQ 335
N+ ++ ++ L+ C+ G+L A L + L D
Sbjct: 641 LNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDS 688
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 97/229 (42%), Gaps = 5/229 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHK 156
L+A K+ A +FD+M N ++++LL G C K V LF +
Sbjct: 659 LLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAV-CLFGTAMGR 717
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
+ P+ V Y ++ G +A EM KKG D + FN ++ G+
Sbjct: 718 GTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMK 777
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
A + TM V PN+ +YN L G + ++ + L L M + I PD TF++LI
Sbjct: 778 ANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLIL 837
Query: 277 GFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
G G + + K G ++ F +L+ E G + AF+L
Sbjct: 838 GLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDL 886
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 100/226 (44%), Gaps = 7/226 (3%)
Query: 43 KFKKSSDLGRFRTNTGI------YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTA 96
K +K+ DL F G+ Y L FR +L + I K
Sbjct: 879 KMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYI 938
Query: 97 RLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHK 156
LI + + A K+ DEM ++ +A++ ++ K ++ L D +
Sbjct: 939 TLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDA-MLVLDHMLR 997
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
+ + P + ++ T++ F + A L ME G++LD++ +N L++G +NG A
Sbjct: 998 MRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAA 1057
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
A +++E M + ++ PN+ +Y +D ++ + +L+ +++ +
Sbjct: 1058 AFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQER 1103
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 69/339 (20%), Positives = 138/339 (40%), Gaps = 12/339 (3%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKR----FRWIEEILE 81
S++ G+ ++ V F + G N +YT V L+ A F + EE+++
Sbjct: 693 SLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMK 752
Query: 82 HQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSK 141
++ F A + + + M + A F M + ++N LL +
Sbjct: 753 KGTCPDTVA---FNAIIDSCSRRGQMMK-ANDFFSTMRWWGVCPNLATYNILLHGFSKKQ 808
Query: 142 KFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITF 201
L+ + + GI PD ++++++I G D LL +M +G D TF
Sbjct: 809 ALLRYLSLYSTMMRE-GIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTF 867
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS 261
N L+ + +G+ A + M + V P+ +YN +GL + +++ ++ EM
Sbjct: 868 NILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLE 927
Query: 262 KEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS---GCGMNKAIFKLLVPFVCEKGDLDF 318
+ P + LI G G+++ A + ++ G G ++ +V + G +
Sbjct: 928 NGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTED 987
Query: 319 AFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
A + R L A ++ R ++ ++ EA +L
Sbjct: 988 AMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKL 1026
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 85/189 (44%), Gaps = 7/189 (3%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSK-KFDEVDGLFK--DLPHKLGIE 160
K + F + V EM E V+ +A +N + ++ G FK D LG
Sbjct: 911 KKSAFRESTVVLHEM----LENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFG 966
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
V+ + +++ + G + A +L M + + + TF TL+ F + + A+A K+
Sbjct: 967 SHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKL 1026
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
M ++ +V +YN + G+ + A EL EMR +++ P++ T+ L+
Sbjct: 1027 KGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISA 1086
Query: 281 EGNLEEAKR 289
NL + ++
Sbjct: 1087 ANNLIQGEK 1095
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 61/133 (45%), Gaps = 1/133 (0%)
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
K G P +Y +++K G+L A L + +D + +NTLL +G
Sbjct: 611 KCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLH 670
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG-EMRSKEINPDVFTFYAL 274
+A +++ MV NV P+ +Y++ L GL + + A+ L G M + P+ + L
Sbjct: 671 EAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCL 730
Query: 275 IKGFVNEGNLEEA 287
+ G G+ + A
Sbjct: 731 VDGLSKAGHPKAA 743
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 55/134 (41%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ P Y T+I G + A L EME G + + ++ G G+ DA
Sbjct: 929 GVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDA 988
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ + M+ M + P + ++ + + + +AL+L G M + DV + LI G
Sbjct: 989 MLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMG 1048
Query: 278 FVNEGNLEEAKRWY 291
G+ A Y
Sbjct: 1049 MCANGDSAAAFELY 1062
>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 517
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 143/271 (52%), Gaps = 5/271 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+ + K + A+ V M + + V+++N+L+ K+ ++ +F + +L
Sbjct: 183 LVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMA-QL 241
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ PD+ SY+ +I F +D A LL EM K I +++T+++L+ G +G+ + A
Sbjct: 242 GVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYA 301
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
K+ + M + PN+ +Y++ LD L Q A+ L+ +M+++ I P+++T+ LIKG
Sbjct: 302 LKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKG 361
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
G LE+A++ + G +N + +++ C+KG D A L + C+ +
Sbjct: 362 LCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPN 421
Query: 335 QAPLQLVVDRLAKELRVEEAKELV-ELGKTN 364
++++ L K+ E A++L+ E+ +TN
Sbjct: 422 AKTYEIIILSLFKKDENEMAEKLLCEMIETN 452
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 132/264 (50%), Gaps = 14/264 (5%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
++A +F+ + +N + FN +LG+ V SK + V L + + + GI+P+LV+ N
Sbjct: 44 DDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFR-GIKPNLVNCNI 102
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA----------DAE 218
+I +F G + SA ++L ++ K G + + IT NTL+ G NG+ DA
Sbjct: 103 LINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAV 162
Query: 219 KIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGF 278
++ M+ N+ P+V ++ +DG E + K+A ++ M + I P V T+ +L+ G+
Sbjct: 163 DLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGY 222
Query: 279 VNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQ 335
+ +AK +N + G + + +L+ C+ +D A L K ++ + +
Sbjct: 223 FLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNV 282
Query: 336 APLQLVVDRLAKELRVEEAKELVE 359
++D L K ++ A +LV+
Sbjct: 283 VTYSSLIDGLCKSGKISYALKLVD 306
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 137/274 (50%), Gaps = 12/274 (4%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDE--VDGLFKD-- 152
LI + + +A V ++ + ++ N L+ G C+N K D+ + G KD
Sbjct: 103 LINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAV 162
Query: 153 -LPHKL---GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
L +K+ I PD+ ++ ++ F +G + A +L M +GI+ ++T+N+L+ G+
Sbjct: 163 DLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGY 222
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDV 268
+ + A+ I+ TM + V P+++SY+ ++G K +A+EL+ EM K+I P+V
Sbjct: 223 FLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNV 282
Query: 269 FTFYALIKGFVNEGNLEEAKRWYNKS---GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKR 325
T+ +LI G G + A + ++ G N + ++ +C+ +D A L +
Sbjct: 283 VTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQ 342
Query: 326 TFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
++ + +++ L + ++E+A+++ E
Sbjct: 343 MKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFE 376
Score = 38.5 bits (88), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 37/199 (18%), Positives = 72/199 (36%), Gaps = 22/199 (11%)
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
+ + Y + F + +D A +L + ++ I FN +L + + +
Sbjct: 26 NFIPYFSTSTTFHNNNDVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLS 85
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
+ M ++PN+ + N ++ A ++ ++ P+ T LIKG
Sbjct: 86 QKMEFRGIKPNLVNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLN 145
Query: 282 GNLEEAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLV 341
G + + C G L A +L + E D ++
Sbjct: 146 GKIHDKH----------------------CIVGKLKDAVDLFNKMILENINPDVYTFTIL 183
Query: 342 VDRLAKELRVEEAKELVEL 360
VD KE RV+EAK ++ +
Sbjct: 184 VDGFCKEGRVKEAKNVLAM 202
>gi|326511761|dbj|BAJ92025.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 489
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 136/283 (48%), Gaps = 6/283 (2%)
Query: 89 ISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGA-CVNSKKFDEV 146
IS +TA L+ + +A V DEMP ++TV+SFN L+ A C +
Sbjct: 192 ISPNMYTANMLLRAFCALGRVADAAMVLDEMPDWGVDRTVVSFNTLIAAYCREHGGLEHA 251
Query: 147 DGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLL 206
L K + + G+ P ++YNTII +G + AN LL EM + + +TFNTL+
Sbjct: 252 LELKKRMELE-GLTPSELTYNTIIHGLCKEGRMRQANRLLSEMRAMRVVPNTVTFNTLIY 310
Query: 207 GFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINP 266
G+ +G ++ E MV V ++ +YNA + GL + + KKA L ++ ++ P
Sbjct: 311 GYVMHGDNGTTSRVHEEMVKKGVELDIVTYNALILGLCRDGKIKKAEHLFQQLDRPKLEP 370
Query: 267 DVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLC 323
+ TF ALI G N E A + N KSG N +K+++ C+ D + A ++
Sbjct: 371 NASTFSALILGHCKTQNSERALQLLNVMKKSGFHPNYDTYKIVISTFCKNKDFEGAVDVM 430
Query: 324 KRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKTNSY 366
K R D+ L + L+K ++ A++L K+ +
Sbjct: 431 KELLEMRMAPDKVLLHEFFEALSKAKKLHLAEDLQSADKSGKF 473
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 91/233 (39%), Gaps = 40/233 (17%)
Query: 129 SFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
+ + L AC K + F+ + G+ P + S N I A + + A + E
Sbjct: 128 AIDVLFSACARGNKLSQATLTFRAM-RAHGLLPRVESCNVFISAALCLKRPEIAVSFFRE 186
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV------------------- 229
M + I ++ T N LL F + GR ADA + + M + V
Sbjct: 187 MRRCRISPNMYTANMLLRAFCALGRVADAAMVLDEMPDWGVDRTVVSFNTLIAAYCREHG 246
Query: 230 -----------------RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFY 272
P+ +YN + GL E + ++A L+ EMR+ + P+ TF
Sbjct: 247 GLEHALELKKRMELEGLTPSELTYNTIIHGLCKEGRMRQANRLLSEMRAMRVVPNTVTFN 306
Query: 273 ALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
LI G+V G+ R + K G ++ + L+ +C G + A +L
Sbjct: 307 TLIYGYVMHGDNGTTSRVHEEMVKKGVELDIVTYNALILGLCRDGKIKKAEHL 359
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/229 (20%), Positives = 95/229 (41%), Gaps = 5/229 (2%)
Query: 43 KFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALY 102
+ KK +L + Y + L R R +L + + + LI Y
Sbjct: 253 ELKKRMELEGLTPSELTYNTIIHGLCKEGRMRQANRLLSEMRAMRVVPNTVTFNTLI--Y 310
Query: 103 GKAAMFENA--RKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIE 160
G +N +V +EM + E ++++NAL+ K + + LF+ L + +E
Sbjct: 311 GYVMHGDNGTTSRVHEEMVKKGVELDIVTYNALILGLCRDGKIKKAEHLFQQL-DRPKLE 369
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
P+ +++ +I + + A LL M+K G + T+ ++ F N F A +
Sbjct: 370 PNASTFSALILGHCKTQNSERALQLLNVMKKSGFHPNYDTYKIVISTFCKNKDFEGAVDV 429
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVF 269
+ ++ M + P+ + + L+ K+ A +L +S + P ++
Sbjct: 430 MKELLEMRMAPDKVLLHEFFEALSKAKKLHLAEDLQSADKSGKFIPSIY 478
>gi|225462369|ref|XP_002267684.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
mitochondrial-like [Vitis vinifera]
Length = 393
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 151/298 (50%), Gaps = 9/298 (3%)
Query: 21 PKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEIL 80
P+ + + G+ ++ ++D K D F+ N +YT + +LA A+ F IE+++
Sbjct: 52 PREVLKIFDGLRNPESVMPVLDSVSKRKD---FKPNEALYTLVINKLAQARMFDAIEDVI 108
Query: 81 EHQKQYKDIS-KEGFTARLIALYGK-AAMFENARKVFDEMPGRNCEQTVLSFNALLGACV 138
+ K K + F +I +YG A + A + +MP +C +V +FN +L V
Sbjct: 109 KTLKIDKQCRLSDVFFYNVIKVYGNVAGQPDRAVETLFDMPKFHCWPSVKTFNLVLNMLV 168
Query: 139 NSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL 198
++K+FD V ++ P +LG+E D N ++K G++D+A LL E K+ R ++
Sbjct: 169 SAKRFDVVHKVYAGAP-ELGVEIDACCLNILVKGLCRSGNVDAACELLDEYPKQRCRPNV 227
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
TF+TL+ G +GR A + E M V P+ +N + GL + ++ +EL+G
Sbjct: 228 RTFSTLMHGLCESGRVEGALGLLERMEREGVYPDTVVFNILISGLRKRGRVEEGMELLGR 287
Query: 259 MRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEK 313
M+ K P+ ++ ++ G ++ G +AK + + G + +K+++ +C++
Sbjct: 288 MKLKGCYPNAGSYQEVLYGVLDTGRFGKAKEFMCQMIDEGVSPSFVSYKMMIYGLCKE 345
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 100/230 (43%), Gaps = 3/230 (1%)
Query: 49 DLGRFRTNTGIYTG--TVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAA 106
D+ +F + T + L +AKRF + ++ + L+ ++
Sbjct: 147 DMPKFHCWPSVKTFNLVLNMLVSAKRFDVVHKVYAGAPELGVEIDACCLNILVKGLCRSG 206
Query: 107 MFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSY 166
+ A ++ DE P + C V +F+ L+ S + + GL + + + G+ PD V +
Sbjct: 207 NVDAACELLDEYPKQRCRPNVRTFSTLMHGLCESGRVEGALGLLERMERE-GVYPDTVVF 265
Query: 167 NTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVN 226
N +I +G ++ LL M+ KG + ++ +L G GRF A++ M++
Sbjct: 266 NILISGLRKRGRVEEGMELLGRMKLKGCYPNAGSYQEVLYGVLDTGRFGKAKEFMCQMID 325
Query: 227 MNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
V P+ SY + GL E + ++ +M + P+ + + +++
Sbjct: 326 EGVSPSFVSYKMMIYGLCKENLVADVVWILKQMVEQGFVPERWMWRRILQ 375
>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 641
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 148/343 (43%), Gaps = 17/343 (4%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
V+ I ++ + V+ +K G + Y ++ L AKR+ +EE++ +
Sbjct: 184 VVSAICEQGCVDEGVELLRKLPSFG-CEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRV 242
Query: 87 KDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEV 146
LIA + +FE + +MP C + + ++ +
Sbjct: 243 GCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVA 302
Query: 147 DGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLL 206
+ + +P G++P++V YNT++K + A LL EM ++ LD +TFN L+
Sbjct: 303 NDILSRMP-SYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVD 361
Query: 207 GFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINP 266
F NG ++ E M+ P+V +Y ++G E +A+ L+ M + P
Sbjct: 362 FFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKP 421
Query: 267 DVFTFYALIKGFVNEGNLEEAKRWYN---------KSGCGMNKAIFKLLVPFVCEKGDLD 317
+ ++ ++KG L A+RW + + GC N F L+ F+C+KG ++
Sbjct: 422 NTISYTIVLKG------LCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVE 475
Query: 318 FAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVEL 360
A L K+ C D V+D L K + EEA EL+ +
Sbjct: 476 QAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNV 518
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 115/263 (43%), Gaps = 7/263 (2%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
F +A + + + C + N ++ A DE L + LP G EPD+VSYN
Sbjct: 159 FRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLP-SFGCEPDIVSYN 217
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
++K D L+ EM + G ++ TFNTL+ NG F + M
Sbjct: 218 AVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEH 277
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
P++R Y +DG+ + + A +++ M S + P+V + ++KG + EEA
Sbjct: 278 GCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEA 337
Query: 288 KRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDR 344
+ + C ++ F +LV F C+ G +D L ++ C+ D V++
Sbjct: 338 EDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVING 397
Query: 345 LAKELRVEEAKELVELGKTNSYC 367
KE V+EA V L K S C
Sbjct: 398 FCKEGLVDEA---VMLLKNMSAC 417
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 127/293 (43%), Gaps = 39/293 (13%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
A +E A + EM +C ++FN L+ + D V L + + G PD+
Sbjct: 330 SAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEH-GCIPDV 388
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
++Y T+I F +G +D A LL M G + + I++ +L G R+ DA+++
Sbjct: 389 ITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISH 448
Query: 224 MVNMNVRPN-----------------------------------VRSYNARLDGLAIEKQ 248
M+ PN + SY+ +DGL +
Sbjct: 449 MIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGK 508
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKL 305
T++ALEL+ M +K I P+ + ++ EG ++ + ++ + + A++
Sbjct: 509 TEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNA 568
Query: 306 LVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
++ +C++ + D A + S C+ +++ +++ LA E V EA++L+
Sbjct: 569 VISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLL 621
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 103/237 (43%), Gaps = 2/237 (0%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
+VI G KE + V K S G + NT YT ++ L A+R+ +E++ H Q
Sbjct: 393 TVINGFCKEGLVDEAVMLLKNMSACG-CKPNTISYTIVLKGLCRAERWVDAQELISHMIQ 451
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
+ LI K + E A ++ +M C ++S++ ++ + K +E
Sbjct: 452 QGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEE 511
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
L + +K GI P+ + Y+++ A +G D + ++ +R D +N ++
Sbjct: 512 ALELLNVMINK-GITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVI 570
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
A + MV+ PN +Y + GLA E ++A +L+ E+ S+
Sbjct: 571 SSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSELCSR 627
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 95/255 (37%), Gaps = 39/255 (15%)
Query: 107 MFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSY 166
+ +A V DEMP R C T P +
Sbjct: 123 LIADALTVLDEMPLRGCAAT----------------------------------PPMC-- 146
Query: 167 NTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVN 226
+ I++A G SA L + KG LD N ++ G + ++ + +
Sbjct: 147 HVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPS 206
Query: 227 MNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEG---N 283
P++ SYNA L GL + K+ EL+ EM P+V TF LI G
Sbjct: 207 FGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQ 266
Query: 284 LEEAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVD 343
+ EA + GC + ++ ++ +C+ G + A ++ R S + V+
Sbjct: 267 VHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLK 326
Query: 344 RLAKELRVEEAKELV 358
L R EEA++L+
Sbjct: 327 GLCSAERWEEAEDLL 341
Score = 41.6 bits (96), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 33/161 (20%), Positives = 67/161 (41%), Gaps = 9/161 (5%)
Query: 201 FNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMR 260
+ L+ + GR ADA + +T + V +YNA + G Q A L +
Sbjct: 47 LSALIRSLCAAGRTADAARALDTAGDAA---GVVAYNAMIAGYCRAGQVAAARRLAAAV- 102
Query: 261 SKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLD 317
+ P+ +T++ +++ G + +A ++ GC + +++ C G
Sbjct: 103 --PVPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFR 160
Query: 318 FAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
A + ++ C +D LVV + ++ V+E EL+
Sbjct: 161 SAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELL 201
>gi|222612695|gb|EEE50827.1| hypothetical protein OsJ_31237 [Oryza sativa Japonica Group]
Length = 550
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/259 (33%), Positives = 134/259 (51%), Gaps = 13/259 (5%)
Query: 110 NARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVD-GLFKDLPHKL---GIEPDLVS 165
+A +V D+MP +T +SFN L+ A D VD G L K+ G+ PD+V+
Sbjct: 271 DAAEVLDKMPEWGVGRTTVSFNTLIAAYCR----DGVDAGPALQLKMKMEQEGLVPDVVT 326
Query: 166 YNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMV 225
Y+TII +G + AN +L EM KG+ + +T+NTL+ G+ + G A A ++ E MV
Sbjct: 327 YDTIIHGLCKEGRMGKANQVLSEMRVKGVMPNTVTYNTLIHGYVALGDNAMAGRVHEEMV 386
Query: 226 NMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLE 285
V ++ +YNA + GL E + KK L+ E+ ++ P+ TF ALI G+ N E
Sbjct: 387 KNRVELDIVTYNALILGLCNEGKMKKVEHLLRELDRAKLEPNASTFSALIVGWCKMQNSE 446
Query: 286 EAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV-DQAPLQLV 341
A + N KSG N +K+++ C+ DL+ A ++ RC+ D+A L
Sbjct: 447 RALQLLNVMKKSGFHPNYTTYKMVISSFCKNKDLEGAVDVMGDMLG-RCIAPDKALLNEF 505
Query: 342 VDRLAKELRVEEAKELVEL 360
D L K ++ A+ L L
Sbjct: 506 FDGLWKAKKLHLAENLRSL 524
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 99/194 (51%), Gaps = 5/194 (2%)
Query: 127 VLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLL 186
V+S N + A + ++ + F+++ + I P++ + N +++AF D G A +L
Sbjct: 218 VVSCNVFISAALGLRRPEIALSFFREM-RRCRISPNIYTANMVLRAFCDLGRTADAAEVL 276
Query: 187 YEMEKKGIRLDLITFNTLLLGFYSNGRFA-DAEKIWETMVNMNVRPNVRSYNARLDGLAI 245
+M + G+ ++FNTL+ + +G A A ++ M + P+V +Y+ + GL
Sbjct: 277 DKMPEWGVGRTTVSFNTLIAAYCRDGVDAGPALQLKMKMEQEGLVPDVVTYDTIIHGLCK 336
Query: 246 EKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAI 302
E + KA +++ EMR K + P+ T+ LI G+V G+ A R + K+ ++
Sbjct: 337 EGRMGKANQVLSEMRVKGVMPNTVTYNTLIHGYVALGDNAMAGRVHEEMVKNRVELDIVT 396
Query: 303 FKLLVPFVCEKGDL 316
+ L+ +C +G +
Sbjct: 397 YNALILGLCNEGKM 410
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 78/171 (45%), Gaps = 3/171 (1%)
Query: 101 LYGKAAMFENAR--KVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLG 158
++G A+ +NA +V +EM E ++++NAL+ N K +V+ L ++L +
Sbjct: 366 IHGYVALGDNAMAGRVHEEMVKNRVELDIVTYNALILGLCNEGKMKKVEHLLREL-DRAK 424
Query: 159 IEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAE 218
+EP+ +++ +I + + + A LL M+K G + T+ ++ F N A
Sbjct: 425 LEPNASTFSALIVGWCKMQNSERALQLLNVMKKSGFHPNYTTYKMVISSFCKNKDLEGAV 484
Query: 219 KIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVF 269
+ M+ + P+ N DGL K+ A L + PDV+
Sbjct: 485 DVMGDMLGRCIAPDKALLNEFFDGLWKAKKLHLAENLRSLNNGLKFIPDVY 535
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 168/352 (47%), Gaps = 33/352 (9%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRF----RWIEEILE 81
S++RG+ V F++ S ++ Y + L+ + R R +EE+++
Sbjct: 15 SILRGLCDAGQCSDAVLHFREMSK--TCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVD 72
Query: 82 HQKQYKDISKEGFTARLIA----LYG--KAAMFENARKVFDEMPGRNCEQTVLSFNALL- 134
+ GF + + L+G KA ENA + ++M R C V+S+ ++
Sbjct: 73 N----------GFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVIN 122
Query: 135 GACVNSKKFDEVDGLFKDLPHKL--GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKK 192
G C K D+VD + + + G +P++++Y T++ F G LD A L+ +M ++
Sbjct: 123 GLC----KLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTER 178
Query: 193 GIRLDLITFNTLLLGFYSNGRFADAEKIWETMV-NMNVRPNVRSYNARLDGLAIEKQTKK 251
G R + IT+N ++ G S + A ++++ M + + P+V +Y+ +D L +
Sbjct: 179 GYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDD 238
Query: 252 ALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK---RWYNKSGCGMNKAIFKLLVP 308
A LV M SK +P+V T+ +L+ G G L+EA + +SGC N + ++
Sbjct: 239 ACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIID 298
Query: 309 FVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVEL 360
C+ G +D A++L + C + +++D K + E+A LVE+
Sbjct: 299 GHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEV 350
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 161/373 (43%), Gaps = 42/373 (11%)
Query: 25 GSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQK 84
G+++ G + +L V+ +K ++ G +R N Y + L + ++ ++ + +
Sbjct: 153 GTLVDGFCRVGDLDGAVELVRKMTERG-YRPNAITYNNIMHGLCSGRKLDSALQLFKEME 211
Query: 85 QYKDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKF 143
+ + FT + ++ K+ ++A ++ + M + C V+++++LL + K
Sbjct: 212 ESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKL 271
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT 203
DE L + + G P++V+YNTII G +D A LL EM G + +++T+
Sbjct: 272 DEATALLQRMTRS-GCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTV 330
Query: 204 LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG------ 257
LL F G+ DA + E MV PN+ +YN+ LD + + ++A +L+
Sbjct: 331 LLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKG 390
Query: 258 -----------------------------EMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
+M S PD+ TF +I ++ A
Sbjct: 391 CVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAY 450
Query: 289 RWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFA-FNLCKRTFSERCLVDQAPLQLVVDR 344
+N +SGC N + LV +C+ D A + L + T + C D V+D
Sbjct: 451 ELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDG 510
Query: 345 LAKELRVEEAKEL 357
L K RV+ A +L
Sbjct: 511 LCKSKRVDRAYKL 523
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 119/265 (44%), Gaps = 3/265 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+ + + + A ++ +M R +++N ++ + +K D LFK++
Sbjct: 155 LVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESG 214
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
PD+ +Y+TI+ + V G +D A L+ M KG +++T+++LL G G+ +A
Sbjct: 215 SCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEA 274
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ + M PN+ +YN +DG + +A L+ EM P+V T+ L+
Sbjct: 275 TALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDA 334
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
F G E+A + G N + L+ C+K +++ A L + C+ +
Sbjct: 335 FCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPN 394
Query: 335 QAPLQLVVDRLAKELRVEEAKELVE 359
V+ L K +V E L+E
Sbjct: 395 VVSYNTVIAGLCKATKVHEGVLLLE 419
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 117/260 (45%), Gaps = 10/260 (3%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A ++F+ + C ++++N+L+ S++FD+ + L +++ K G PD+++YNT+I
Sbjct: 449 AYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVI 508
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD-AEKIWETMVNMNV 229
+D A L +M G+ D +T+ ++++ RF D A + E M+
Sbjct: 509 DGLCKSKRVDRAYKLFLQMLSDGLAPDDVTY-SIVISSLCKWRFMDEANNVLELMLKNGF 567
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
P +Y +DG KALE++ + SK PDV TF I G L +A
Sbjct: 568 DPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGE 627
Query: 290 WYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLA 346
++G + + L+ C+ + A +L + C D A +V L
Sbjct: 628 LLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLVGHLV 687
Query: 347 -----KELRVEEAKELVELG 361
K+L E +K +V+ G
Sbjct: 688 DKKSYKDLLAEVSKSMVDTG 707
>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
Length = 1059
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 129/257 (50%), Gaps = 6/257 (2%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFT-ARLIALYGKAAMFENARKVFDEM 118
+T + +A +F I L H+ + IS + ++ LI + + + F A + +M
Sbjct: 618 FTRVLTAIAKMNKFD-IVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALALLGKM 676
Query: 119 PGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGS 178
+ ++++ +LL +F E L + +LG+EP++V YNT+I
Sbjct: 677 MKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMA-ELGLEPNVVIYNTVINGLCKNRD 735
Query: 179 LDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNA 238
L++A + Y MEKKGI D +T+NTL+ G ++GR+ DA ++ MV + PNV + A
Sbjct: 736 LNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTA 795
Query: 239 RLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSG 295
+D E +A L EM + ++P++ T+ +LI GF +G L +AK ++ G
Sbjct: 796 LIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKG 855
Query: 296 CGMNKAIFKLLVPFVCE 312
C + + L+ C+
Sbjct: 856 CFPDVVTYNTLITGFCK 872
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 130/250 (52%), Gaps = 4/250 (1%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
NA ++F M + +++N L+ NS ++ + L +D+ K I+P+++ +
Sbjct: 736 LNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMV-KRKIDPNVIFFT 794
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
+I FV +G+L A L EM ++ + +++T+N+L+ GF GR DA+ +++ MV+
Sbjct: 795 ALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSK 854
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
P+V +YN + G K+ + ++L EM + + D FT+ LI G+ G L A
Sbjct: 855 GCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVA 914
Query: 288 KRWYNKS-GCGMNKAI--FKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDR 344
++ +N+ CG+ I + +L+ +C G ++ A + + + VD +++
Sbjct: 915 QKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQG 974
Query: 345 LAKELRVEEA 354
+ + +V+EA
Sbjct: 975 MCRNDKVKEA 984
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 131/311 (42%), Gaps = 48/311 (15%)
Query: 92 EGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFK 151
G+ +L + + FE+A +F EM +V+ F LL A N ++++ V F
Sbjct: 30 SGYREKLRTGFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVI-YFS 88
Query: 152 DLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSN 211
GI DL S+ +I F L A ++L +M K G ++TF +LL GF
Sbjct: 89 QQMELFGISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLR 148
Query: 212 GRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK--------- 262
R DA + +MV PNV YN +D L ALEL+ EM K
Sbjct: 149 NRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVT 208
Query: 263 ---------------------------EINPDVFTFYALIKGFVNEGNLEEAKRWYN--- 292
INPDVFTF ALI FV +GNL+EA+ Y
Sbjct: 209 YNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQML 268
Query: 293 KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTF----SERCLVDQAPLQLVVDRLAKE 348
+S G N + L+ +C G L A K+TF S+ C + +++ K
Sbjct: 269 QSSIGPNTVTYNSLINGLCMHGRLYHA----KKTFDLMASKGCFPNVVTYNTLINGFCKS 324
Query: 349 LRVEEAKELVE 359
RVE+ +L +
Sbjct: 325 RRVEDGMKLFQ 335
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 116/234 (49%), Gaps = 4/234 (1%)
Query: 127 VLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLL 186
++++N LL S ++ + + +D+ K I PD+ ++ +I AFV +G+LD A L
Sbjct: 206 LVTYNTLLTGLCYSGEWRQAARILRDMT-KRRINPDVFTFTALIDAFVKQGNLDEAQELY 264
Query: 187 YEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIE 246
+M + I + +T+N+L+ G +GR A+K ++ M + PNV +YN ++G
Sbjct: 265 KQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKS 324
Query: 247 KQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN-KSGCGMNKAIFK- 304
++ + ++L M + + D FT+ LI G+ G L AK ++ CG+ I
Sbjct: 325 RRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITH 384
Query: 305 -LLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
+L+ +C G++ A S + +++ L K +VEEA EL
Sbjct: 385 CILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWEL 438
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 93/199 (46%), Gaps = 3/199 (1%)
Query: 124 EQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSAN 183
E V+ +N L+ + + L ++ K + DLV+YNT++ G A
Sbjct: 167 EPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAA 226
Query: 184 TLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
+L +M K+ I D+ TF L+ F G +A+++++ M+ ++ PN +YN+ ++GL
Sbjct: 227 RILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGL 286
Query: 244 AIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNK 300
+ + A + M SK P+V T+ LI GF +E+ + + + G +
Sbjct: 287 CMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDT 346
Query: 301 AIFKLLVPFVCEKGDLDFA 319
+ L+ C+ G L A
Sbjct: 347 FTYNTLIHGYCQVGKLRVA 365
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 87/180 (48%), Gaps = 1/180 (0%)
Query: 110 NARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTI 169
+A+ +FD M + C V+++N L+ SK+ ++ LF ++ H+ G+ D +YNT+
Sbjct: 843 DAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQ-GLVGDAFTYNTL 901
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
I + G L+ A + M G+ D++T+N LL +NG+ A + E + +
Sbjct: 902 IHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQM 961
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
++ +YN + G+ + K+A L + K + D + +I G G EA +
Sbjct: 962 DVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADK 1021
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 108/248 (43%), Gaps = 5/248 (2%)
Query: 49 DLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAM- 107
D+ + R N ++T T A K+ ++E E KQ S T +L M
Sbjct: 231 DMTKRRINPDVFTFTALIDAFVKQGN-LDEAQELYKQMLQSSIGPNTVTYNSLINGLCMH 289
Query: 108 --FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVS 165
+A+K FD M + C V+++N L+ S++ ++ LF+ + ++ G+ D +
Sbjct: 290 GRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRM-YREGLVGDTFT 348
Query: 166 YNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMV 225
YNT+I + G L A + M G+ D+IT LL G NG A + M
Sbjct: 349 YNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMR 408
Query: 226 NMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLE 285
+ + +YN + GL + ++A EL + + + PD T+ +I G G
Sbjct: 409 SGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRR 468
Query: 286 EAKRWYNK 293
EA + +
Sbjct: 469 EADELFRR 476
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 107/289 (37%), Gaps = 74/289 (25%)
Query: 142 KFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL--- 198
KFD+ GLF ++ I P +V + ++ A D L ++ME GI DL
Sbjct: 595 KFDDAFGLFCEMLQSRPI-PSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSF 653
Query: 199 --------------------------------ITFNTLLLGFYSNGRFADAEKIWETMVN 226
+T +LL GF RF +A + ++M
Sbjct: 654 TILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAE 713
Query: 227 MNVRPNVRSYNARLDGLAIEKQTKKALE-------------------------------- 254
+ + PNV YN ++GL + ALE
Sbjct: 714 LGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTD 773
Query: 255 ---LVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVP 308
L+ +M ++I+P+V F ALI FV EGNL EAK Y + N + L+
Sbjct: 774 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLIN 833
Query: 309 FVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
C +G L A ++ S+ C D ++ K RVE+ +L
Sbjct: 834 GFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKL 882
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 81/169 (47%), Gaps = 1/169 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K+ E+ K+F EM + ++N L+ + K + +F +
Sbjct: 866 LITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMV-DC 924
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ PD+V+YN ++ + G ++ A ++ +++K + +D+IT+N ++ G N + +A
Sbjct: 925 GVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEA 984
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINP 266
++ ++ V+ + +Y + GL ++A +L M+ P
Sbjct: 985 WCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMP 1033
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 78/159 (49%), Gaps = 2/159 (1%)
Query: 83 QKQYKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSK 141
+ ++ + + FT LI Y +A A+KVF+ M ++++N LL N+
Sbjct: 885 EMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNG 944
Query: 142 KFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITF 201
K ++ + +DL K ++ D+++YN II+ + A L + +KG++LD I +
Sbjct: 945 KIEKALVMVEDL-QKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAY 1003
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARL 240
T++ G NG +A+K+ M P+ R Y+ L
Sbjct: 1004 ITMISGLCRNGLRREADKLCTRMKEDGFMPSERIYDETL 1042
>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
[Vitis vinifera]
Length = 691
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 93/397 (23%), Positives = 169/397 (42%), Gaps = 42/397 (10%)
Query: 18 ATGPKFIGS--VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRW 75
A+ PK + VI+ + E N + F + + ++ ++RL + K
Sbjct: 2 ASAPKSLSPKRVIKLLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAH 61
Query: 76 IEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGR-NCEQTVLSFNALL 134
+ I+E + K E +I Y K +M + A +F M C+ + S+N+LL
Sbjct: 62 VSRIVELIRTQKCKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLL 121
Query: 135 GACVNSKKFDEVDGLF-------------------------------KDLPHKL---GIE 160
A + S K+DE + F K+L + + G
Sbjct: 122 NALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFS 181
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
PD+ SY T+I + G + A L EM ++G+ D+ +N L+ GF+ G +A +I
Sbjct: 182 PDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEI 241
Query: 221 WETMV-NMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFV 279
WE ++ +V PN+ SYN ++GL + ++ E+ M+ E D++T+ LI G
Sbjct: 242 WERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLC 301
Query: 280 NEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQA 336
GNL+ A R Y ++G + ++ ++ G ++ L K E C
Sbjct: 302 GSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRT-VV 360
Query: 337 PLQLVVDRLAKELRVEEAKELVELGKTNSYCRYNLKF 373
+++ L + +V+EA + EL C ++ +
Sbjct: 361 SYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTY 397
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 128/295 (43%), Gaps = 37/295 (12%)
Query: 25 GSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQK 84
G ++ G+ K L + + +++ + GR +T Y+ + L R + +L+
Sbjct: 398 GVLVHGLCKNGYLNKALSILEEAEN-GRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMT 456
Query: 85 QYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
++ +I + +A+ E+A + F M + C TV+++N L+ +++F
Sbjct: 457 KHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFS 516
Query: 145 EVDGLFKDLPHKLGIEPDLVSY-----------------------------------NTI 169
E L K++ HK G +P++++Y N I
Sbjct: 517 EAYALVKEMLHK-GWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNII 575
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
I G ++ A L EM+++ +L+T NTL+ GFY F A KIW+ ++
Sbjct: 576 IHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGP 635
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
+P++ SYN L GL + A+ + + + + P T+ L++ ++ G L
Sbjct: 636 QPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVRAVLDNGAL 690
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 120/265 (45%), Gaps = 4/265 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI K +A K+FDEMP R V +N L+ +++ L
Sbjct: 190 LINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGP 249
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
+ P++ SYN +I G D + + + M+K DL T++TL+ G +G A
Sbjct: 250 SVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGA 309
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++++ M V P+V YN L+G + ++ LEL M KE V ++ LI+G
Sbjct: 310 TRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVME-KEGCRTVVSYNILIRG 368
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
++EA + + C + + +LV +C+ G L+ A ++ + + R +D
Sbjct: 369 LFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLD 428
Query: 335 QAPLQLVVDRLAKELRVEEAKELVE 359
+++ L +E R++E +++
Sbjct: 429 TFAYSSMINGLCREGRLDEVAGVLD 453
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 123/282 (43%), Gaps = 13/282 (4%)
Query: 86 YKDISKEGFTARLIAL------YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
YK++++ G + ++ Y +A E +++ M C +TV+S+N L+
Sbjct: 313 YKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGC-RTVVSYNILIRGLFE 371
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
+ K DE +++ LP K D ++Y ++ G L+ A ++L E E LD
Sbjct: 372 NAKVDEAISIWELLPEK-DCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTF 430
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
+++++ G GR + + + M +PN NA ++G + + AL G M
Sbjct: 431 AYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNM 490
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLEEA----KRWYNKSGCGMNKAIFKLLVPFVCEKGD 315
SK P V T+ LI G EA K +K G N + LL+ +C+
Sbjct: 491 VSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHK-GWKPNMITYSLLMNGLCQGKK 549
Query: 316 LDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
LD A NL + + D +++ L +VE+A +L
Sbjct: 550 LDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQL 591
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 87/180 (48%), Gaps = 1/180 (0%)
Query: 114 VFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAF 173
V D+M C+ NA++ V + K ++ F ++ K G P +V+YNT+I
Sbjct: 451 VLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSK-GCFPTVVTYNTLINGL 509
Query: 174 VDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNV 233
A L+ EM KG + ++IT++ L+ G + A +W + +P+V
Sbjct: 510 SKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDV 569
Query: 234 RSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK 293
+ +N + GL + + AL+L EM+ ++ P++ T L++GF + E A + ++
Sbjct: 570 KMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDH 629
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 131/310 (42%), Gaps = 52/310 (16%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I G+ NL +K+ ++ G + +Y + A R IEE LE
Sbjct: 295 TLIHGLCGSGNLDGATRVYKEMAENG-VSPDVVVYNTMLNGYLRAGR---IEECLE---L 347
Query: 86 YKDISKEGFTARLIALYGKA--AMFENAR-----KVFDEMPGRNCEQTVLSFNALL-GAC 137
+K + KEG R + Y +FENA+ +++ +P ++C +++ L+ G C
Sbjct: 348 WKVMEKEG--CRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLC 405
Query: 138 VNS----------------------------------KKFDEVDGLFKDLPHKLGIEPDL 163
N + DEV G+ + K G +P+
Sbjct: 406 KNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMT-KHGCKPNP 464
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
N +I FV L+ A M KG ++T+NTL+ G RF++A + +
Sbjct: 465 HVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKE 524
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M++ +PN+ +Y+ ++GL K+ AL L + K PDV +I G + G
Sbjct: 525 MLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGK 584
Query: 284 LEEAKRWYNK 293
+E+A + Y++
Sbjct: 585 VEDALQLYSE 594
>gi|255660904|gb|ACU25621.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
Length = 484
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 145/320 (45%), Gaps = 34/320 (10%)
Query: 73 FRWIEE--ILEHQKQYK---------------------DISKEGFT------ARLIALYG 103
FRW+E + EH ++ D+ K+G +I YG
Sbjct: 32 FRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYG 91
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K + + + K+F +M E+T+ S+NAL A + ++ F + + GIEP
Sbjct: 92 KEGIVQESVKMFQKMEELGVERTIKSYNALFKAILRRGRYMMAKRYFNKMLSE-GIEPAR 150
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
++N +I F G +++AN +M+ + I D++T+NT++ G+Y + +AEK +
Sbjct: 151 HTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVE 210
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M N+ P V +Y + G Q AL LV EM+ I P+ T+ L+ G N G
Sbjct: 211 MKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAGK 270
Query: 284 LEEA----KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQ 339
+ EA K +K + +IF L+ C G+LD A ++ K +
Sbjct: 271 MIEARSILKEMMDKYLAPTDNSIFMRLISSQCNSGNLDAAADVLKAMIRLSVPTEAGHYG 330
Query: 340 LVVDRLAKELRVEEAKELVE 359
++++ K + ++A +L++
Sbjct: 331 VLIENFCKAGQYDQAVKLLD 350
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 99/234 (42%), Gaps = 46/234 (19%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I Y + E A K F EM GRN E TV+++ L+ V+ + D+ L +++
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEM-KGF 249
Query: 158 GIEPDLVSYNT----------------IIKAFVDK--------------------GSLDS 181
GI+P+ ++Y+T I+K +DK G+LD+
Sbjct: 250 GIKPNAITYSTLLPGLCNAGKMIEARSILKEMMDKYLAPTDNSIFMRLISSQCNSGNLDA 309
Query: 182 ANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV--RPNV------ 233
A +L M + + + + L+ F G++ A K+ + ++ ++ RP
Sbjct: 310 AADVLKAMIRLSVPTEAGHYGVLIENFCKAGQYDQAVKLLDKLIEKDIILRPQSTLHLEP 369
Query: 234 RSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+YN ++ L Q KA LV ++ + D LI+G EG+ + A
Sbjct: 370 SAYNPMIEYLCNNGQAAKAEALVRQLLKLGVQ-DPTALNTLIRGHSQEGSPDSA 422
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 96/215 (44%), Gaps = 17/215 (7%)
Query: 37 LKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTA 96
LK ++DK+ +D I+ + N+ ++L+ + ++ G
Sbjct: 278 LKEMMDKYLAPTD-------NSIFMRLISSQCNSGNLDAAADVLKAMIRLSVPTEAGHYG 330
Query: 97 RLIALYGKAAMFENARKVFDEM--------PGRNCEQTVLSFNALLGACVNSKKFDEVDG 148
LI + KA ++ A K+ D++ P ++N ++ N+ + + +
Sbjct: 331 VLIENFCKAGQYDQAVKLLDKLIEKDIILRPQSTLHLEPSAYNPMIEYLCNNGQAAKAEA 390
Query: 149 LFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
L + L KLG++ D + NT+I+ +GS DSA LL M ++ + + +++L+ +
Sbjct: 391 LVRQLL-KLGVQ-DPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYDSLVQSY 448
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
ADA+ ++M+ + P+ + + ++ L
Sbjct: 449 LKKNEPADAKAALDSMIENDHLPDSSLFRSVMESL 483
>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
Length = 650
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 93/397 (23%), Positives = 169/397 (42%), Gaps = 42/397 (10%)
Query: 18 ATGPKFIGS--VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRW 75
A+ PK + VI+ + E N + F + + ++ ++RL + K
Sbjct: 2 ASAPKSLSPKRVIKLLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAH 61
Query: 76 IEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGR-NCEQTVLSFNALL 134
+ I+E + K E +I Y K +M + A +F M C+ + S+N+LL
Sbjct: 62 VSRIVELIRTQKCKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLL 121
Query: 135 GACVNSKKFDEVDGLF-------------------------------KDLPHKL---GIE 160
A + S K+DE + F K+L + + G
Sbjct: 122 NALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFS 181
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
PD+ SY T+I + G + A L EM ++G+ D+ +N L+ GF+ G +A +I
Sbjct: 182 PDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEI 241
Query: 221 WETMV-NMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFV 279
WE ++ +V PN+ SYN ++GL + ++ E+ M+ E D++T+ LI G
Sbjct: 242 WERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLC 301
Query: 280 NEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQA 336
GNL+ A R Y ++G + ++ ++ G ++ L K E C
Sbjct: 302 GSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRT-VV 360
Query: 337 PLQLVVDRLAKELRVEEAKELVELGKTNSYCRYNLKF 373
+++ L + +V+EA + EL C ++ +
Sbjct: 361 SYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTY 397
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 120/265 (45%), Gaps = 4/265 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI K +A K+FDEMP R V +N L+ +++ L
Sbjct: 190 LINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGP 249
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
+ P++ SYN +I G D + + + M+K DL T++TL+ G +G A
Sbjct: 250 SVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGA 309
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++++ M V P+V YN L+G + ++ LEL M KE V ++ LI+G
Sbjct: 310 TRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVME-KEGCRTVVSYNILIRG 368
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
++EA + + C + + +LV +C+ G L+ A ++ + + R +D
Sbjct: 369 LFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLD 428
Query: 335 QAPLQLVVDRLAKELRVEEAKELVE 359
+++ L +E R++E +++
Sbjct: 429 TFAYSSMINGLCREGRLDEVAGVLD 453
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 123/282 (43%), Gaps = 13/282 (4%)
Query: 86 YKDISKEGFTARLIAL------YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
YK++++ G + ++ Y +A E +++ M C +TV+S+N L+
Sbjct: 313 YKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGC-RTVVSYNILIRGLFE 371
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
+ K DE +++ LP K D ++Y ++ G L+ A ++L E E LD
Sbjct: 372 NAKVDEAISIWELLPEK-DCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTF 430
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
+++++ G GR + + + M +PN NA ++G + + AL G M
Sbjct: 431 AYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNM 490
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLEEA----KRWYNKSGCGMNKAIFKLLVPFVCEKGD 315
SK P V T+ LI G EA K +K G N + LL+ +C+
Sbjct: 491 VSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHK-GWKPNMITYSLLMNGLCQGKK 549
Query: 316 LDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
LD A NL + + D +++ L +VE+A +L
Sbjct: 550 LDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQL 591
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 106/219 (48%), Gaps = 2/219 (0%)
Query: 25 GSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQK 84
G ++ G+ K L + + +++ + GR +T Y+ + L R + +L+
Sbjct: 398 GVLVHGLCKNGYLNKALSILEEAEN-GRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMT 456
Query: 85 QYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
++ +I + +A+ E+A + F M + C TV+++N L+ +++F
Sbjct: 457 KHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFS 516
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
E L K++ HK G +P++++Y+ ++ LD A L + +KG + D+ N +
Sbjct: 517 EAYALVKEMLHK-GWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNII 575
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
+ G S+G+ DA +++ M PN+ ++N ++G
Sbjct: 576 IHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGF 614
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 87/180 (48%), Gaps = 1/180 (0%)
Query: 114 VFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAF 173
V D+M C+ NA++ V + K ++ F ++ K G P +V+YNT+I
Sbjct: 451 VLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSK-GCFPTVVTYNTLINGL 509
Query: 174 VDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNV 233
A L+ EM KG + ++IT++ L+ G + A +W + +P+V
Sbjct: 510 SKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDV 569
Query: 234 RSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK 293
+ +N + GL + + AL+L EM+ ++ P++ T L++GF + E A + ++
Sbjct: 570 KMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDH 629
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 131/310 (42%), Gaps = 52/310 (16%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I G+ NL +K+ ++ G + +Y + A R IEE LE
Sbjct: 295 TLIHGLCGSGNLDGATRVYKEMAENG-VSPDVVVYNTMLNGYLRAGR---IEECLE---L 347
Query: 86 YKDISKEGFTARLIALYGKA--AMFENAR-----KVFDEMPGRNCEQTVLSFNALL-GAC 137
+K + KEG R + Y +FENA+ +++ +P ++C +++ L+ G C
Sbjct: 348 WKVMEKEG--CRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLC 405
Query: 138 VNS----------------------------------KKFDEVDGLFKDLPHKLGIEPDL 163
N + DEV G+ + K G +P+
Sbjct: 406 KNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMT-KHGCKPNP 464
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
N +I FV L+ A M KG ++T+NTL+ G RF++A + +
Sbjct: 465 HVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKE 524
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M++ +PN+ +Y+ ++GL K+ AL L + K PDV +I G + G
Sbjct: 525 MLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGK 584
Query: 284 LEEAKRWYNK 293
+E+A + Y++
Sbjct: 585 VEDALQLYSE 594
>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
Length = 707
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 127/265 (47%), Gaps = 4/265 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI KA+ + A ++ EM R ++FN+++ + KF+ L + +
Sbjct: 16 LIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAER- 74
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
P +YNT+I + ++D A TL+ E G D++T++ L G GR +A
Sbjct: 75 NCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEA 134
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ + M PN+ +YN +DGL +T+KA EL+ + S PDV T+ ++ G
Sbjct: 135 FELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDG 194
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
EG L++A + K GC + + L+ +C G +D A ++ K S+ C D
Sbjct: 195 LCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTAD 254
Query: 335 QAPLQLVVDRLAKELRVEEAKELVE 359
+V+ K R +EA+++V+
Sbjct: 255 ALAYVSLVNGYCKSSRTKEAQKVVD 279
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 101/204 (49%), Gaps = 3/204 (1%)
Query: 159 IEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAE 218
+ PD+ +YN +I D A+ +L+EM +G+ D +TFN+++ G G+F A
Sbjct: 6 VAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAH 65
Query: 219 KIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGF 278
+ M N RP+ +YN + GL ++ +A LV E S PDV T+ L G
Sbjct: 66 SLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGL 125
Query: 279 VNEGNLEEA---KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQ 335
G ++EA + + +GC N + L+ +C+ + A+ L + S + D
Sbjct: 126 CKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDV 185
Query: 336 APLQLVVDRLAKELRVEEAKELVE 359
++VD L KE R+++A ++VE
Sbjct: 186 VTYTIIVDGLCKEGRLDKALKMVE 209
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 127/259 (49%), Gaps = 7/259 (2%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K + A ++ EM G C ++++N L+ + K ++ L + L G PD+
Sbjct: 127 KRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSS-GFVPDV 185
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
V+Y I+ +G LD A ++ M K+G +IT+ L+ G GR +A I++
Sbjct: 186 VTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKE 245
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
MV+ + + +Y + ++G +TK+A ++V +R P + + AL+ G+ EG
Sbjct: 246 MVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRG---TPYIDVYNALMDGYCKEGR 302
Query: 284 LEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL 340
L+E + GC N + +++ +C+ G +D AF + S C+ D +
Sbjct: 303 LDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNI 362
Query: 341 VVDRLAKELRVEEAKELVE 359
++D L K + +EA+++++
Sbjct: 363 IIDGLFKASKPKEARQVLD 381
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 117/260 (45%), Gaps = 8/260 (3%)
Query: 102 YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEP 161
Y K + VF++M R C + ++N ++ K DE + + H G P
Sbjct: 297 YCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESM-HSAGCVP 355
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
D+VSYN II A +L +M + GI D +T+NTL+ F RF DA I
Sbjct: 356 DVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGIL 415
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM-RSKEINPDVFTFYALIKGFVN 280
+ M+ V P+ +YN + GL+ + A EL+ EM R+ + T+ +I
Sbjct: 416 KNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCK 475
Query: 281 EGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAP 337
EG L++A + G N + + + +C++G LD A +L + R D+
Sbjct: 476 EGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLR---DEVS 532
Query: 338 LQLVVDRLAKELRVEEAKEL 357
V+ L K +++ A +L
Sbjct: 533 YTTVIIGLCKAEQLDRASKL 552
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 150/345 (43%), Gaps = 23/345 (6%)
Query: 26 SVIRGIYKENNLKR---LVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEH 82
++I G+ K + ++ L++ S + T T I G + K + +E +L+
Sbjct: 155 TLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKR 214
Query: 83 QKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKK 142
I+ +TA + L + + A +F EM ++C L++ +L+ S +
Sbjct: 215 GCTPSVIT---YTALMEGLC-RTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSR 270
Query: 143 FDE----VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL 198
E VDG+ P + YN ++ + +G LD + +M +G ++
Sbjct: 271 TKEAQKVVDGIRG--------TPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNI 322
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
T+N ++ G +G+ +A E+M + P+V SYN +DGL + K+A +++ +
Sbjct: 323 KTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQ 382
Query: 259 MRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGD 315
M I PD T+ L+ F E ++A K+G + + L+ + +
Sbjct: 383 MIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNR 442
Query: 316 LDFAFNLCKRTFSERCLVDQAPL-QLVVDRLAKELRVEEAKELVE 359
L A+ L C+V ++DRL KE +++A L++
Sbjct: 443 LGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMD 487
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 105/259 (40%), Gaps = 44/259 (16%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
KA+ + AR+V D+M +++N L+ ++FD+ G+ K++ K G++PD
Sbjct: 369 KASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMI-KAGVDPDN 427
Query: 164 VSYNT------------------------------------IIKAFVDKGSLDSANTLLY 187
V+YNT II +G L A L+
Sbjct: 428 VTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMD 487
Query: 188 EMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEK 247
M G+ + +T+N + GR +A + M + R V SY + GL +
Sbjct: 488 HMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTL--RDEV-SYTTVIIGLCKAE 544
Query: 248 QTKKALELVGEMRS-KEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIF 303
Q +A +L EM + K + TF LI F L+EA + GC + +
Sbjct: 545 QLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITY 604
Query: 304 KLLVPFVCEKGDLDFAFNL 322
+++ +C+ +D A+ L
Sbjct: 605 NMVITCLCKLDKVDKAWEL 623
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 81/220 (36%), Gaps = 40/220 (18%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K + A + D M G E +++N + + DE L ++ D
Sbjct: 475 KEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTL----RDE 530
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEM-EKKGIRLDLITFNTLLLGFYSNGRFADAEKIWE 222
VSY T+I LD A+ L EM KG+ + TFN L+ F R +A + E
Sbjct: 531 VSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLE 590
Query: 223 TMVNMNVRPNVRSYN------ARLD-----------------------------GLAIEK 247
MV P+V +YN +LD GL +
Sbjct: 591 LMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQG 650
Query: 248 QTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+ K+AL+++ EM S + D L +G EEA
Sbjct: 651 RGKEALQVLEEMASSDCEIDDLKCRKLYLALRGQGRGEEA 690
>gi|20279450|gb|AAM18730.1|AC092548_8 hypothetical protein [Oryza sativa Japonica Group]
Length = 729
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 86/259 (33%), Positives = 134/259 (51%), Gaps = 13/259 (5%)
Query: 110 NARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVD-GLFKDLPHKL---GIEPDLVS 165
+A +V D+MP +T +SFN L+ A D VD G L K+ G+ PD+V+
Sbjct: 450 DAAEVLDKMPEWGVGRTTVSFNTLIAAYCR----DGVDAGPALQLKMKMEQEGLVPDVVT 505
Query: 166 YNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMV 225
Y+TII +G + AN +L EM KG+ + +T+NTL+ G+ + G A A ++ E MV
Sbjct: 506 YDTIIHGLCKEGRMGKANQVLSEMRVKGVMPNTVTYNTLIHGYVALGDNAMAGRVHEEMV 565
Query: 226 NMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLE 285
V ++ +YNA + GL E + KK L+ E+ ++ P+ TF ALI G+ N E
Sbjct: 566 KNRVELDIVTYNALILGLCNEGKMKKVEHLLRELDRAKLEPNASTFSALIVGWCKMQNSE 625
Query: 286 EAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV-DQAPLQLV 341
A + N KSG N +K+++ C+ DL+ A ++ RC+ D+A L
Sbjct: 626 RALQLLNVMKKSGFHPNYTTYKMVISSFCKNKDLEGAVDVMGDMLG-RCIAPDKALLNEF 684
Query: 342 VDRLAKELRVEEAKELVEL 360
D L K ++ A+ L L
Sbjct: 685 FDGLWKAKKLHLAENLRSL 703
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 99/194 (51%), Gaps = 5/194 (2%)
Query: 127 VLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLL 186
V+S N + A + ++ + F+++ + I P++ + N +++AF D G A +L
Sbjct: 397 VVSCNVFISAALGLRRPEIALSFFREM-RRCRISPNIYTANMVLRAFCDLGRTADAAEVL 455
Query: 187 YEMEKKGIRLDLITFNTLLLGFYSNGRFA-DAEKIWETMVNMNVRPNVRSYNARLDGLAI 245
+M + G+ ++FNTL+ + +G A A ++ M + P+V +Y+ + GL
Sbjct: 456 DKMPEWGVGRTTVSFNTLIAAYCRDGVDAGPALQLKMKMEQEGLVPDVVTYDTIIHGLCK 515
Query: 246 EKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAI 302
E + KA +++ EMR K + P+ T+ LI G+V G+ A R + K+ ++
Sbjct: 516 EGRMGKANQVLSEMRVKGVMPNTVTYNTLIHGYVALGDNAMAGRVHEEMVKNRVELDIVT 575
Query: 303 FKLLVPFVCEKGDL 316
+ L+ +C +G +
Sbjct: 576 YNALILGLCNEGKM 589
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 78/171 (45%), Gaps = 3/171 (1%)
Query: 101 LYGKAAMFENAR--KVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLG 158
++G A+ +NA +V +EM E ++++NAL+ N K +V+ L ++L +
Sbjct: 545 IHGYVALGDNAMAGRVHEEMVKNRVELDIVTYNALILGLCNEGKMKKVEHLLREL-DRAK 603
Query: 159 IEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAE 218
+EP+ +++ +I + + + A LL M+K G + T+ ++ F N A
Sbjct: 604 LEPNASTFSALIVGWCKMQNSERALQLLNVMKKSGFHPNYTTYKMVISSFCKNKDLEGAV 663
Query: 219 KIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVF 269
+ M+ + P+ N DGL K+ A L + PDV+
Sbjct: 664 DVMGDMLGRCIAPDKALLNEFFDGLWKAKKLHLAENLRSLNNGLKFIPDVY 714
>gi|255660922|gb|ACU25630.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
Length = 484
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 146/320 (45%), Gaps = 34/320 (10%)
Query: 73 FRWIEE--ILEHQKQYK---------------------DISKEGFT------ARLIALYG 103
FRW+E + EH ++ D+ K+G +I YG
Sbjct: 32 FRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDXDMWVLMIDSYG 91
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
KA + + + K+F +M E+T+ S++AL + ++ F + + GIEP
Sbjct: 92 KAGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRGRYMMAKRYFNKMLSE-GIEPTR 150
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
++N +I F G +++AN +M+ + I D+IT+NT++ G+Y + +AEK +
Sbjct: 151 HTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVITYNTMINGYYRVKKMEEAEKYFVE 210
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M N+ PNV +Y + G Q AL LV EM+ I P+ T+ L+ G N
Sbjct: 211 MKGKNIEPNVVTYTTLIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYSTLLPGLCNAEK 270
Query: 284 LEEA----KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQ 339
+ EA K +K + +IF L+ C+ G+LD A ++ K +
Sbjct: 271 MSEARSILKEMLDKYIAPTDNSIFMRLISSQCKAGNLDAAADVLKAMIRLSVPTEAGHYG 330
Query: 340 LVVDRLAKELRVEEAKELVE 359
++++ K + ++A +L++
Sbjct: 331 VLIENYCKAGQYDQAVKLLD 350
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 104/246 (42%), Gaps = 47/246 (19%)
Query: 87 KDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
++IS + T +I Y + E A K F EM G+N E V+++ L+ V+ + D+
Sbjct: 179 REISPDVITYNTMINGYYRVKKMEEAEKYFVEMKGKNIEPNVVTYTTLIKGYVSVDQVDD 238
Query: 146 VDGLFKDLPHKLGIEPDLVSYNT----------------IIKAFVDK------------- 176
L +++ GI+P+ ++Y+T I+K +DK
Sbjct: 239 ALRLVEEM-KGYGIKPNAITYSTLLPGLCNAEKMSEARSILKEMLDKYIAPTDNSIFMRL 297
Query: 177 -------GSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
G+LD+A +L M + + + + L+ + G++ A K+ + ++ ++
Sbjct: 298 ISSQCKAGNLDAAADVLKAMIRLSVPTEAGHYGVLIENYCKAGQYDQAVKLLDKLIEKDI 357
Query: 230 --RPNV------RSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
RP +YN ++ L Q KA LV ++ + D LI+G E
Sbjct: 358 ILRPQSTLHMEPSAYNXMIEYLCNNGQXAKAETLVRQLLKLGVQ-DPTALNTLIRGHSRE 416
Query: 282 GNLEEA 287
G+ + A
Sbjct: 417 GSPDSA 422
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 94/215 (43%), Gaps = 17/215 (7%)
Query: 37 LKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTA 96
LK ++DK+ +D I+ + A ++L+ + ++ G
Sbjct: 278 LKEMLDKYIAPTD-------NSIFMRLISSQCKAGNLDAAADVLKAMIRLSVPTEAGHYG 330
Query: 97 RLIALYGKAAMFENARKVFDEM--------PGRNCEQTVLSFNALLGACVNSKKFDEVDG 148
LI Y KA ++ A K+ D++ P ++N ++ N+ + + +
Sbjct: 331 VLIENYCKAGQYDQAVKLLDKLIEKDIILRPQSTLHMEPSAYNXMIEYLCNNGQXAKAET 390
Query: 149 LFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
L + L KLG++ D + NT+I+ +GS DSA LL M ++ + + +++L+ +
Sbjct: 391 LVRQLL-KLGVQ-DPTALNTLIRGHSREGSPDSAFELLKIMLRRKVDSEKSAYDSLVQSY 448
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
DA+ ++M+ + P+ + + ++ L
Sbjct: 449 LKKSEPXDAKAALDSMIENDHLPDSSLFRSVMESL 483
>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g07290, mitochondrial; Flags: Precursor
gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 880
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 134/278 (48%), Gaps = 7/278 (2%)
Query: 90 SKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGL 149
S +T + AL + + + A +FDEM R C+ V ++ L+ K +E +G+
Sbjct: 300 STRTYTVLIKALCDRG-LIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGV 358
Query: 150 FKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFY 209
+ + K I P +++YN +I + G + A LL MEK+ + ++ TFN L+ G
Sbjct: 359 CRKMV-KDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLC 417
Query: 210 SNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVF 269
G+ A + + M++ + P++ SYN +DGL E A +L+ M +I PD
Sbjct: 418 RVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCL 477
Query: 270 TFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRT 326
TF A+I F +G + A + + G +++ L+ VC+ G A + +
Sbjct: 478 TFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETL 537
Query: 327 FSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKTN 364
R L L +++D L+K +V+E EL LGK N
Sbjct: 538 VKMRILTTPHSLNVILDMLSKGCKVKE--ELAMLGKIN 573
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 115/259 (44%), Gaps = 37/259 (14%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEV---------- 146
LI Y K A ++ M R C+ V +FN L+ G C K + V
Sbjct: 377 LINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNG 436
Query: 147 ------------DGLFKD----LPHKL-------GIEPDLVSYNTIIKAFVDKGSLDSAN 183
DGL ++ +KL IEPD +++ II AF +G D A+
Sbjct: 437 LSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVAS 496
Query: 184 TLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
L M +KGI LD +T TL+ G G+ DA I ET+V M + S N LD L
Sbjct: 497 AFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDML 556
Query: 244 AIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR---WYNKSGCGMNK 300
+ + K+ L ++G++ + P V T+ L+ G + G++ + R SGC N
Sbjct: 557 SKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNV 616
Query: 301 AIFKLLVPFVCEKGDLDFA 319
+ +++ +C+ G ++ A
Sbjct: 617 YPYTIIINGLCQFGRVEEA 635
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 101/229 (44%), Gaps = 4/229 (1%)
Query: 133 LLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKK 192
LLG C D + +F + ++ P+ VSY+ +I + G L+ A L +M +K
Sbjct: 237 LLGFCRGLNLRDALK-VFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEK 295
Query: 193 GIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKA 252
G + T+ L+ G A +++ M+ +PNV +Y +DGL + + ++A
Sbjct: 296 GCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEA 355
Query: 253 LELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPF 309
+ +M I P V T+ ALI G+ +G + A K C N F L+
Sbjct: 356 NGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEG 415
Query: 310 VCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
+C G A +L KR D +++D L +E + A +L+
Sbjct: 416 LCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLL 464
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 102/219 (46%), Gaps = 5/219 (2%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G ++ Y TI+ A G ++A + ++ K G LD +LLLGF DA
Sbjct: 190 GFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDA 249
Query: 218 EKIWETMV-NMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
K+++ M + PN SY+ + GL + ++A L +M K P T+ LIK
Sbjct: 250 LKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIK 309
Query: 277 GFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV 333
+ G +++A +++ GC N + +L+ +C G ++ A +C++ +R
Sbjct: 310 ALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFP 369
Query: 334 DQAPLQLVVDRLAKELRVEEAKELVELGKTNSYCRYNLK 372
+++ K+ RV A EL+ + + + C+ N++
Sbjct: 370 SVITYNALINGYCKDGRVVPAFELLTVMEKRA-CKPNVR 407
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 103/230 (44%), Gaps = 36/230 (15%)
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
PH L + D++S +K + +L ++ K G+ ++T+ TL+ G +G
Sbjct: 546 PHSLNVILDMLSKGCKVKEEL---------AMLGKINKLGLVPSVVTYTTLVDGLIRSGD 596
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
+ +I E M PNV Y ++GL + ++A +L+ M+ ++P+ T+
Sbjct: 597 ITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTV 656
Query: 274 LIKGFVNEGNLE---EAKRWYNKSGCGMNKAIF-KLLVPFVCEKGDLDFAFNLCKRTFSE 329
++KG+VN G L+ E R + G +N I+ LL FV + +D N + T S+
Sbjct: 657 MVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGID---NSEESTVSD 713
Query: 330 RCLVDQAP--------------------LQLVVDRLAKELRVEEAKELVE 359
L + P +V RL KE R +E+ +LV+
Sbjct: 714 IALRETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQ 763
>gi|255660876|gb|ACU25607.1| pentatricopeptide repeat-containing protein [Verbena hastata]
Length = 484
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 145/320 (45%), Gaps = 34/320 (10%)
Query: 73 FRWIEE--ILEHQKQYK---------------------DISKEGFT------ARLIALYG 103
FRW+E + EH ++ D+ K+G +I YG
Sbjct: 32 FRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYG 91
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K + + + K+F +M E+T+ S+NAL + ++ F + + GIEP
Sbjct: 92 KEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSE-GIEPTR 150
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
++N +I F G +++AN +M+ + I D++T+NT++ G+Y + +AEK +
Sbjct: 151 HTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVE 210
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M N+ P V +Y + G Q AL LV EM+ I P+ T+ L+ G N
Sbjct: 211 MKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGSGIKPNAITYSTLLPGLCNAEK 270
Query: 284 LEEA----KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQ 339
+ EA K +K + +IF L+ C+ G+LD A ++ K +
Sbjct: 271 MSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYG 330
Query: 340 LVVDRLAKELRVEEAKELVE 359
L++++ K + ++A +L++
Sbjct: 331 LLIEKFCKAGQYDKAVKLLD 350
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 100/236 (42%), Gaps = 50/236 (21%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I Y + E A K F EM GRN E TV+++ L+ V+ + D+ L +++
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGS- 249
Query: 158 GIEPDLVSYNT----------------IIKAFVDK--------------------GSLDS 181
GI+P+ ++Y+T I+K +DK G+LD+
Sbjct: 250 GIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDA 309
Query: 182 ANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMV----------NMNVRP 231
A +L M + + + + L+ F G++ A K+ + ++ +++ P
Sbjct: 310 AADVLKAMIRLSVPTEAGHYGLLIEKFCKAGQYDKAVKLLDKLIEKDIILRPQSTLHLEP 369
Query: 232 NVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
N +YN ++ L Q KA LV ++ + D LI+G EG+ + A
Sbjct: 370 N--AYNPMIEYLCNNGQASKAETLVRQLMKLGVQ-DPTALNTLIRGHSQEGSPDSA 422
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 101/250 (40%), Gaps = 17/250 (6%)
Query: 39 RLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEIL-EHQKQYKDISKEGFTAR 97
RLV++ K S + N Y+ + L NA++ IL E +Y + R
Sbjct: 241 RLVEEMKGSG----IKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMR 296
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHK- 156
LI+ + K+ + A V M + + L+ + ++D+ L L K
Sbjct: 297 LISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGLLIEKFCKAGQYDKAVKLLDKLIEKD 356
Query: 157 --------LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
L +EP+ +YN +I+ + G A TL+ ++ K G++ D NTL+ G
Sbjct: 357 IILRPQSTLHLEPN--AYNPMIEYLCNNGQASKAETLVRQLMKLGVQ-DPTALNTLIRGH 413
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDV 268
G A ++ + M+ V +YN+ + + + A + M + PD
Sbjct: 414 SQEGSPDSAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPXDAKAALDSMIENDHLPDS 473
Query: 269 FTFYALIKGF 278
F ++++
Sbjct: 474 ALFRSVMESL 483
Score = 45.1 bits (105), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 98/215 (45%), Gaps = 17/215 (7%)
Query: 37 LKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTA 96
LK ++DK+ +D I+ + + ++L+ + ++ G
Sbjct: 278 LKEMMDKYLAPTD-------NSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYG 330
Query: 97 RLIALYGKAAMFENARKVFDEMPGRNC---EQTVL-----SFNALLGACVNSKKFDEVDG 148
LI + KA ++ A K+ D++ ++ Q+ L ++N ++ N+ + + +
Sbjct: 331 LLIEKFCKAGQYDKAVKLLDKLIEKDIILRPQSTLHLEPNAYNPMIEYLCNNGQASKAET 390
Query: 149 LFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
L + L KLG++ D + NT+I+ +GS DSA LL M ++ + + +N+L+ +
Sbjct: 391 LVRQL-MKLGVQ-DPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYNSLVQSY 448
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
DA+ ++M+ + P+ + + ++ L
Sbjct: 449 LKKNEPXDAKAALDSMIENDHLPDSALFRSVMESL 483
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 136/270 (50%), Gaps = 8/270 (2%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
++ AR+VF M V SFN L+G + + +E +K++ + + PD+VS++
Sbjct: 245 WDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRR-VTPDVVSFS 303
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
+I F +G +D A L EM + G+ D + + ++ GF G +A ++ + MV
Sbjct: 304 CLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAF 363
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
P+V +YN L+GL E++ A EL+ EM+ + + PD+ TF LI G+ +GN+E+A
Sbjct: 364 GCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKA 423
Query: 288 KRWYNK-SGCGMNKAI--FKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDR 344
++++ S + I + L+ +C +GDL A L S + +++D
Sbjct: 424 LQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDS 483
Query: 345 LAKELRVEEA----KELVELGKTNSYCRYN 370
++ +V+ A E+V G + YN
Sbjct: 484 HCEKGQVDNAFAFLDEMVNKGIVPNIMTYN 513
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 122/240 (50%), Gaps = 4/240 (1%)
Query: 122 NCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDS 181
N E + N ++ + + +F EVD + ++ K + PD+V++N ++ A G +++
Sbjct: 154 NSEVNTYTLNIMVHSYCKTLQFGEVDTVISEM-EKRCVFPDVVTHNVMVDARFRAGDVEA 212
Query: 182 ANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLD 241
A L+ M KGI+ L+T+N++L G NGR+ A +++ M V P+VRS+N +
Sbjct: 213 AMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIG 272
Query: 242 GLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS---GCGM 298
G + ++AL EMR + + PDV +F LI F G ++ A + + G
Sbjct: 273 GFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMP 332
Query: 299 NKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
+ I+ +++ C G + A + + CL D +++ L KE R+ +A+EL+
Sbjct: 333 DGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELL 392
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 132/280 (47%), Gaps = 4/280 (1%)
Query: 78 EILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGAC 137
E L +++ + +I + +A + A +V DEM C V+++N LL
Sbjct: 320 EYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGL 379
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLD 197
++ + + L ++ + G+ PDL ++ T+I + G+++ A + + +R D
Sbjct: 380 CKERRLSDAEELLNEMKER-GVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPD 438
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
++T+NTL+ G G A ++W+ M + + PN +Y+ +D + Q A +
Sbjct: 439 IVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLD 498
Query: 258 EMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKG 314
EM +K I P++ T+ ++IKG+ GN+ + +++ K + + L+ ++G
Sbjct: 499 EMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEG 558
Query: 315 DLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA 354
+ AFNL K +E D +++ + ++EA
Sbjct: 559 KMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEA 598
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 113/236 (47%), Gaps = 1/236 (0%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMP 119
Y + L +R EE+L K+ LI Y + E A + FD +
Sbjct: 372 YNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTIS 431
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL 179
+ ++++N L+ + + L+ D+ H I P+ V+Y+ +I + +KG +
Sbjct: 432 DQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDM-HSREIFPNHVTYSILIDSHCEKGQV 490
Query: 180 DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNAR 239
D+A L EM KGI +++T+N+++ G+ +G + ++ M + V P++ +YN
Sbjct: 491 DNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTL 550
Query: 240 LDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSG 295
+ G E + +A L+ M ++ + PD T+ +I GF GN++EA Y K G
Sbjct: 551 IHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMG 606
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 107/226 (47%), Gaps = 4/226 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + +A E A + + EM GR V+SF+ L+G + D +++ +
Sbjct: 270 LIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREM-REF 328
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ PD V Y +I F G + A + EM G D++T+NTLL G R +DA
Sbjct: 329 GLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDA 388
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
E++ M V P++ ++ + G + +KAL+ + + + PD+ T+ LI G
Sbjct: 389 EELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDG 448
Query: 278 FVNEGNLEEAKRWYNKSGCG---MNKAIFKLLVPFVCEKGDLDFAF 320
+G+L +A ++ N + +L+ CEKG +D AF
Sbjct: 449 MCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAF 494
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 101/183 (55%), Gaps = 1/183 (0%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A +++D+M R ++++ L+ + + D ++ +K GI P++++YN+II
Sbjct: 458 ANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNK-GIVPNIMTYNSII 516
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
K + G++ L +M + DLIT+NTL+ G+ G+ +A + + M N NV+
Sbjct: 517 KGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQ 576
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
P+ +YN + G ++ ++A + +M ++ I PD +T+ ++I G V GN +++ +
Sbjct: 577 PDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQL 636
Query: 291 YNK 293
+++
Sbjct: 637 HDE 639
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 112/242 (46%), Gaps = 2/242 (0%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I G ++ N+++ + F SD R R + Y + + E+ +
Sbjct: 409 TLIHGYCRDGNIEKALQFFDTISD-QRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHS 467
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
+ + LI + + +NA DEM + ++++N+++ S +
Sbjct: 468 REIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSK 527
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
+ H + PDL++YNT+I +V +G + A LL ME + ++ D +T+N ++
Sbjct: 528 GQQFLPKMRHD-KVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMII 586
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEIN 265
GF +G +A+ +++ M + P+ +Y + ++G + +KK+ +L EM K +
Sbjct: 587 SGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLA 646
Query: 266 PD 267
PD
Sbjct: 647 PD 648
>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
Length = 577
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 129/260 (49%), Gaps = 5/260 (1%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K E A + ++ C V+++ +L+ K+ E LFK++ + G+ D
Sbjct: 33 KMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALR-GLALDT 91
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
V Y +I+ + G + A+++ M G D++T +T++ G GR A +I+++
Sbjct: 92 VCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKS 151
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M + PN Y+A + GL ++ ALE++ +M+ PD T+ LI G G+
Sbjct: 152 MEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGD 211
Query: 284 LEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFA-FNLCKRTFSERCLVDQAPLQ 339
+E A+ +++ ++GC + + +L+ C+ G+ D A +L + T C +D
Sbjct: 212 VEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYT 271
Query: 340 LVVDRLAKELRVEEAKELVE 359
+VD LAK ++EEA L+E
Sbjct: 272 AIVDWLAKNKKIEEAVALME 291
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 147/338 (43%), Gaps = 18/338 (5%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
+I G K N + + + + YT V LA K+ ++E
Sbjct: 237 LISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEK---- 292
Query: 87 KDISKEGFTARLIALYG-------KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
I+ G T IA Y K E A + ++ C V+++ +L+
Sbjct: 293 --ITANGCTPT-IATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGK 349
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
K+ E LFK++ + G+ D V Y +I+ + G + A+++ M G D++
Sbjct: 350 EKRSFEAYKLFKEMALR-GLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVV 408
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
T +T++ G GR A +I+++M + PN Y+A + GL ++ ALE++ +M
Sbjct: 409 TLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQM 468
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDL 316
+ PD T+ LI G G++E A+ +++ ++GC + + +L+ C+ G+
Sbjct: 469 KKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNT 528
Query: 317 DFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA 354
D A + S RC + ++ L K ++ +A
Sbjct: 529 DAACGVFDDMSSSRCSANVVTYGALISGLCKRRQLTKA 566
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 139/342 (40%), Gaps = 18/342 (5%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
+++ G+ K L+ +D +K D G + YT + L KR E K
Sbjct: 26 ALLNGLCKMGRLEEAIDLLRKIVDNG-CTPDVVTYTSLIDGLGKEKRS------FEAYKL 78
Query: 86 YKDISKEGFT------ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
+K+++ G LI + A V+ M C V++ + ++
Sbjct: 79 FKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSK 138
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
+ + +FK + + G+ P+ V Y+ +I +D A +L +M+K D I
Sbjct: 139 AGRIGAAVRIFKSMEAR-GLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTI 197
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALE-LVGE 258
T+N L+ G +G A ++ M+ +P+V +YN + G T A L E
Sbjct: 198 TYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQE 257
Query: 259 MRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGD 315
D+ T+ A++ +EEA K +GC A + L+ +C+ G
Sbjct: 258 TTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGR 317
Query: 316 LDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
L+ A +L ++ C D ++D L KE R EA +L
Sbjct: 318 LEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKL 359
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 112/273 (41%), Gaps = 14/273 (5%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
+++ G+ K L+ +D +K D G + YT + L KR E K
Sbjct: 307 ALLNGLCKMGRLEEAIDLLRKIVDNG-CTPDVVTYTSLIDGLGKEKRS------FEAYKL 359
Query: 86 YKDISKEGFT------ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
+K+++ G LI + A V+ M C V++ + ++
Sbjct: 360 FKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSK 419
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
+ + +FK + + G+ P+ V Y+ +I +D A +L +M+K D I
Sbjct: 420 AGRIGAAVRIFKSMEAR-GLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTI 478
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
T+N L+ G +G A ++ M+ +P+V +YN + G T A + +M
Sbjct: 479 TYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDM 538
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN 292
S + +V T+ ALI G L +A ++
Sbjct: 539 SSSRCSANVVTYGALISGLCKRRQLTKASLYFQ 571
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 69/145 (47%), Gaps = 3/145 (2%)
Query: 213 RFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFY 272
+ +A + E + P + +YNA L+GL + ++A++L+ ++ PDV T+
Sbjct: 1 KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60
Query: 273 ALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSE 329
+LI G E EA + + + G ++ + L+ + + G + A ++ K S
Sbjct: 61 SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120
Query: 330 RCLVDQAPLQLVVDRLAKELRVEEA 354
C+ D L ++D L+K R+ A
Sbjct: 121 GCVPDVVTLSTMIDGLSKAGRIGAA 145
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/161 (19%), Positives = 64/161 (39%), Gaps = 1/161 (0%)
Query: 64 VQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNC 123
+ L+ A R I + + E + LI KA + A ++ +M C
Sbjct: 414 IDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFC 473
Query: 124 EQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSAN 183
+++N L+ S + F ++ G +PD+ +YN +I F G+ D+A
Sbjct: 474 TPDTITYNILIDGLCKSGDVEAARAFFDEMLEA-GCKPDVYTYNILISGFCKAGNTDAAC 532
Query: 184 TLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
+ +M +++T+ L+ G + A ++ M
Sbjct: 533 GVFDDMSSSRCSANVVTYGALISGLCKRRQLTKASLYFQHM 573
>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
Length = 596
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 152/304 (50%), Gaps = 7/304 (2%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I + K ++ ++ FK+ G R N Y+ + L + R+ ++L +
Sbjct: 227 TIIDSLCKYRHVDDALNLFKEMETKG-IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 285
Query: 86 YK-DISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
K + + F A LI + K F A K++D+M R+ + + ++N+L+ + D
Sbjct: 286 KKINPNLVTFNA-LIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLD 344
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
+ +F+ + K PD+V+YNT+IK F ++ L EM +G+ D +T+ TL
Sbjct: 345 KAKQMFEFMVSK-DCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 403
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+ G + +G +A+K+++ MV+ V P++ +Y+ LDGL + +KALE+ M+ EI
Sbjct: 404 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 463
Query: 265 NPDVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFN 321
D++ + +I+G G +++ + + G N + ++ +C K L A+
Sbjct: 464 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 523
Query: 322 LCKR 325
L K+
Sbjct: 524 LLKK 527
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 102/191 (53%), Gaps = 4/191 (2%)
Query: 101 LYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIE 160
L+ KA+ A + D M R C+ ++++ ++ D L + IE
Sbjct: 164 LHNKAS---EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKM-EAAKIE 219
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
D+V +NTII + +D A L EME KGIR +++T+++L+ S GR++DA ++
Sbjct: 220 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQL 279
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
M+ + PN+ ++NA +D E + +A +L +M + I+PD+FT+ +L+ GF
Sbjct: 280 LSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCM 339
Query: 281 EGNLEEAKRWY 291
L++AK+ +
Sbjct: 340 HDRLDKAKQMF 350
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 105/220 (47%), Gaps = 4/220 (1%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
++A +F M +++ FN LL A KKFD V L + + +L I L +YN
Sbjct: 28 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKM-QRLEIVHGLYTYN 86
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
+I F + + A LL +M K G ++T ++LL G+ R +DA + + MV M
Sbjct: 87 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 146
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
RP+ ++ + GL + + +A+ LV M + P++ T+ ++ G G+ + A
Sbjct: 147 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 206
Query: 288 KRWYNKSGCGMNKA---IFKLLVPFVCEKGDLDFAFNLCK 324
NK +A IF ++ +C+ +D A NL K
Sbjct: 207 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFK 246
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 133/296 (44%), Gaps = 21/296 (7%)
Query: 5 SRLLSCSFSTTATATGPKFIGSVIRGIYKEN--NLKRLVDKFKKSSDLGRFRTNTGIYTG 62
S L+SC S + + + +I N L+D F K G+F +Y
Sbjct: 261 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE---GKFVEAEKLYDD 317
Query: 63 TVQRLANAKRFRW--------IEEILEHQKQYKD--ISKEGFTA-----RLIALYGKAAM 107
++R + F + + + L+ KQ + +SK+ F LI + K+
Sbjct: 318 MIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKR 377
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
E+ ++F EM R +++ L+ + D +FK + G+ PD+++Y+
Sbjct: 378 VEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD-GVPPDIMTYS 436
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
++ + G L+ A + M+K I+LD+ + T++ G G+ D ++ ++
Sbjct: 437 ILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK 496
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
V+PNV +YN + GL ++ ++A L+ +M+ P+ T+ LI+ + +G+
Sbjct: 497 GVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGD 552
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 99/223 (44%), Gaps = 4/223 (1%)
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLD 197
++ K D+ GLF + + P +V +N ++ A D +L +M++ I
Sbjct: 23 LHDMKLDDAIGLFGGMVKSRPL-PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHG 81
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
L T+N L+ F + + A + M+ + P++ + ++ L+G K+ A+ LV
Sbjct: 82 LYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVD 141
Query: 258 EMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKG 314
+M PD TF LI G EA ++ GC N + ++V +C++G
Sbjct: 142 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 201
Query: 315 DLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
D D A NL + + + D ++D L K V++A L
Sbjct: 202 DTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNL 244
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 86/179 (48%), Gaps = 2/179 (1%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
+NA+KVF +M +++++ LL N+ K ++ +F D K I+ D+ Y T
Sbjct: 414 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVF-DYMQKSEIKLDIYIYTT 472
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
+I+ G +D L + KG++ +++T+NT++ G S +A + + M
Sbjct: 473 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 532
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
PN +YN + + + EL+ EMRS D T L+ +++G L+++
Sbjct: 533 PLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTI-GLVANMLHDGRLDKS 590
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 144/314 (45%), Gaps = 6/314 (1%)
Query: 64 VQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNC 123
++ L A + R +LE + E L+ + + E A +V +M C
Sbjct: 204 IKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGC 263
Query: 124 EQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSA 182
T ++ N L+ G C + D + + +++ G EPD V+YNT + G + A
Sbjct: 264 SPTGVTVNVLINGYCKMGRVEDALGYIQQEIAD--GFEPDQVTYNTFVHGLCQNGHVSHA 321
Query: 183 NTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDG 242
++ M ++G D+ T+NT++ NG +A+ I MV+ P+ ++N +
Sbjct: 322 LKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVA 381
Query: 243 LAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMN 299
L+ + + ++AL+L E+ K ++PDV+TF LI G+ R + + SGC +
Sbjct: 382 LSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPD 441
Query: 300 KAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ + +L+ +C G L A +L S C ++D L K++R+EEA+E+ +
Sbjct: 442 EVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFD 501
Query: 360 LGKTNSYCRYNLKF 373
R + F
Sbjct: 502 QMDAQGISRSAVTF 515
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 154/352 (43%), Gaps = 32/352 (9%)
Query: 31 IYKENNLKRLVDKFKKSSD-----------LGR--FRTNTGIYTGTVQRLANAKRFRWIE 77
+Y ++ RL+ ++ SD L R F ++ +Y VQ+L A F +E
Sbjct: 50 VYAISDQDRLLAALREQSDPEAALRMLNSALAREDFAPSSAVYEEIVQKLGTAGAFDLME 109
Query: 78 EILEHQKQYKDISKEGFTARLIAL------YGKAAMFENARK-VFDEMPGRN--CEQTVL 128
++ +++ +EG R + + Y + F++A V +++ + +
Sbjct: 110 GLV------REMRREGHQVRAVVVRSFVESYARLRRFDDAVDLVLNQLDNDTFGVQADTV 163
Query: 129 SFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
FN LL V K ++ ++ ++ + GI+PD+V+ NT+IKA + +A +L E
Sbjct: 164 VFNHLLNVLVEGSKLKLLESVYNEMTGR-GIQPDVVTLNTLIKALCRAHQVRTAVLMLEE 222
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
M G+ D TF TL+ GF G A ++ M+ P + N ++G +
Sbjct: 223 MSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGR 282
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKL 305
+ AL + + + PD T+ + G G++ A + + + G + +
Sbjct: 283 VEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNT 342
Query: 306 LVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
++ + + G+LD A + + CL D ++ L+ + R+EEA +L
Sbjct: 343 VINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDL 394
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 87/179 (48%), Gaps = 1/179 (0%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K E A +VFD+M + ++ ++FN L+ +K+ D+ L + + K G++P+
Sbjct: 489 KKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMV-KEGLQPNN 547
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
++YN+I+ + +G++ A +L M G +D++T+ TL+ G GR A K+
Sbjct: 548 ITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRG 607
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEG 282
M +RP ++YN + L + AL L EM PD T+ + + G
Sbjct: 608 MRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGG 666
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 114/265 (43%), Gaps = 39/265 (14%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE---------VDG 148
+I K + A+ + ++M R C +FN L+ A + + +E V G
Sbjct: 343 VINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKG 402
Query: 149 LFKDL---------------PHKLGIE-----------PDLVSYNTIIKAFVDKGSLDSA 182
L D+ PH LGI PD V+YN +I G L +A
Sbjct: 403 LSPDVYTFNILINALCKVGDPH-LGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNA 461
Query: 183 NTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDG 242
LL EME G +T+NT++ R +AE++++ M + + ++N +DG
Sbjct: 462 LDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDG 521
Query: 243 LAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK---RWYNKSGCGMN 299
L K+ A EL+ +M + + P+ T+ +++ + +GN+++A +G ++
Sbjct: 522 LCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEID 581
Query: 300 KAIFKLLVPFVCEKGDLDFAFNLCK 324
+ L+ +C+ G A L +
Sbjct: 582 VVTYGTLINGLCKAGRTQVALKLLR 606
>gi|449455956|ref|XP_004145716.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Cucumis sativus]
gi|449492939|ref|XP_004159147.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Cucumis sativus]
Length = 535
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 164/356 (46%), Gaps = 9/356 (2%)
Query: 23 FIGSVIRGIYKENNLKRLVDKFKKSSDLG-RFRTNTGIYTGTVQRLANAKRFRWIEEIL- 80
F ++ I ++ NL + F + F N Y + RL+ A+ F +E +L
Sbjct: 51 FPNRLVAMIRRQQNLDLALQIFHYAGKYHPAFTHNYDTYHAIIYRLSRARAFEPVESLLL 110
Query: 81 EHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNS 140
E Q + S++ F +I YG A+ + A K F + ++V S N LL A V +
Sbjct: 111 ELQDSGINCSEDLFIT-VIRSYGLASRPKMALKTFLRIQTFGVRRSVRSLNTLLNALVQN 169
Query: 141 KKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLIT 200
+F V LFK K G+ P++ + N +IKA K ++ A + EM GI +++T
Sbjct: 170 NRFSSVHLLFKYSKSKFGVVPNVFTCNILIKALCKKNDVEGARKVFDEMPSMGIVPNVVT 229
Query: 201 FNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMR 260
+ T+L G+ S G A++++ + + P+ +Y +DG + + A++++ EM
Sbjct: 230 YTTILGGYVSRGDMIGAKRVFGELFDHGWLPDATTYTILMDGYVKQGRFTDAVKVMDEME 289
Query: 261 SKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLD 317
+ P+ T+ +I G+ E EA N + N A+ ++ +C +G +
Sbjct: 290 ENGVEPNDITYGVIILGYCKERKSGEALNLLNDMLEKKYIPNSALCCKVIDVLCGEGRVK 349
Query: 318 FAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL---VELGKTNSYCRYN 370
A + ++ + C D A ++ L KE + EA++L E G +S YN
Sbjct: 350 EACKMWEKLLKKNCTPDNAITSTLIHWLCKEGNIWEARKLFNEFERGTISSLLTYN 405
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/374 (22%), Positives = 150/374 (40%), Gaps = 42/374 (11%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
+VIR + K + F + G R+ + T + L RF + + ++ K
Sbjct: 126 TVIRSYGLASRPKMALKTFLRIQTFGVRRSVRSLNT-LLNALVQNNRFSSVHLLFKYSKS 184
Query: 86 YKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
+ FT LI K E ARKVFDEMP V+++ +LG V+
Sbjct: 185 KFGVVPNVFTCNILIKALCKKNDVEGARKVFDEMPSMGIVPNVVTYTTILGGYVSRGDMI 244
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
+F +L G PD +Y ++ +V +G A ++ EME+ G+ + IT+ +
Sbjct: 245 GAKRVFGEL-FDHGWLPDATTYTILMDGYVKQGRFTDAVKVMDEMEENGVEPNDITYGVI 303
Query: 205 LLGFY-----------------------------------SNGRFADAEKIWETMVNMNV 229
+LG+ GR +A K+WE ++ N
Sbjct: 304 ILGYCKERKSGEALNLLNDMLEKKYIPNSALCCKVIDVLCGEGRVKEACKMWEKLLKKNC 363
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
P+ + + L E +A +L E I+ + T+ LI G G L EA R
Sbjct: 364 TPDNAITSTLIHWLCKEGNIWEARKLFNEFERGTIS-SLLTYNTLIAGMCEMGELCEAAR 422
Query: 290 WYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLA 346
++ + GC N+ + +L+ + G + + + CL++++ ++V+ L
Sbjct: 423 LWDDMLEKGCVPNEFTYNMLIKGFLKVGKAKEVIKVVEEMLDKGCLLNESTYLILVEGLL 482
Query: 347 KELRVEEAKELVEL 360
K + EE ++ +
Sbjct: 483 KLGKREELLNILSM 496
>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 634
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 152/304 (50%), Gaps = 7/304 (2%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I + K ++ ++ FK+ G R N Y+ + L + R+ ++L +
Sbjct: 265 TIIDSLCKYRHVDDALNLFKEMETKG-IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 323
Query: 86 YK-DISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
K + + F A LI + K F A K++D+M R+ + + ++N+L+ + D
Sbjct: 324 KKINPNLVTFNA-LIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLD 382
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
+ +F+ + K PD+V+YNT+IK F ++ L EM +G+ D +T+ TL
Sbjct: 383 KAKQMFEFMVSK-DCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 441
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+ G + +G +A+K+++ MV+ V P++ +Y+ LDGL + +KALE+ M+ EI
Sbjct: 442 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 501
Query: 265 NPDVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFN 321
D++ + +I+G G +++ + + G N + ++ +C K L A+
Sbjct: 502 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 561
Query: 322 LCKR 325
L K+
Sbjct: 562 LLKK 565
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 102/191 (53%), Gaps = 4/191 (2%)
Query: 101 LYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIE 160
L+ KA+ A + D M R C+ ++++ ++ D L + IE
Sbjct: 202 LHNKAS---EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKM-EAAKIE 257
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
D+V +NTII + +D A L EME KGIR +++T+++L+ S GR++DA ++
Sbjct: 258 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQL 317
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
M+ + PN+ ++NA +D E + +A +L +M + I+PD+FT+ +L+ GF
Sbjct: 318 LSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCM 377
Query: 281 EGNLEEAKRWY 291
L++AK+ +
Sbjct: 378 HDRLDKAKQMF 388
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 105/220 (47%), Gaps = 4/220 (1%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
++A +F M +++ FN LL A KKFD V L + + +L I L +YN
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKM-QRLEIVHGLYTYN 124
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
+I F + + A LL +M K G ++T ++LL G+ R +DA + + MV M
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
RP+ ++ + GL + + +A+ LV M + P++ T+ ++ G G+ + A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244
Query: 288 KRWYNKSGCGMNKA---IFKLLVPFVCEKGDLDFAFNLCK 324
NK +A IF ++ +C+ +D A NL K
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFK 284
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 133/296 (44%), Gaps = 21/296 (7%)
Query: 5 SRLLSCSFSTTATATGPKFIGSVIRGIYKEN--NLKRLVDKFKKSSDLGRFRTNTGIYTG 62
S L+SC S + + + +I N L+D F K G+F +Y
Sbjct: 299 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE---GKFVEAEKLYDD 355
Query: 63 TVQRLANAKRFRW--------IEEILEHQKQYKD--ISKEGFTA-----RLIALYGKAAM 107
++R + F + + + L+ KQ + +SK+ F LI + K+
Sbjct: 356 MIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKR 415
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
E+ ++F EM R +++ L+ + D +FK + G+ PD+++Y+
Sbjct: 416 VEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD-GVPPDIMTYS 474
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
++ + G L+ A + M+K I+LD+ + T++ G G+ D ++ ++
Sbjct: 475 ILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK 534
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
V+PNV +YN + GL ++ ++A L+ +M+ P+ T+ LI+ + +G+
Sbjct: 535 GVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGD 590
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 99/223 (44%), Gaps = 4/223 (1%)
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLD 197
++ K D+ GLF + + P +V +N ++ A D +L +M++ I
Sbjct: 61 LHDMKLDDAIGLFGGMVKSRPL-PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHG 119
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
L T+N L+ F + + A + M+ + P++ + ++ L+G K+ A+ LV
Sbjct: 120 LYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVD 179
Query: 258 EMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKG 314
+M PD TF LI G EA ++ GC N + ++V +C++G
Sbjct: 180 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 239
Query: 315 DLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
D D A NL + + + D ++D L K V++A L
Sbjct: 240 DTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNL 282
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 86/179 (48%), Gaps = 2/179 (1%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
+NA+KVF +M +++++ LL N+ K ++ +F D K I+ D+ Y T
Sbjct: 452 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVF-DYMQKSEIKLDIYIYTT 510
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
+I+ G +D L + KG++ +++T+NT++ G S +A + + M
Sbjct: 511 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 570
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
PN +YN + + + EL+ EMRS D T L+ +++G L+++
Sbjct: 571 PLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTI-GLVANMLHDGRLDKS 628
>gi|255660914|gb|ACU25626.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
Length = 481
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 130/285 (45%), Gaps = 34/285 (11%)
Query: 73 FRWIEE--ILEHQKQYK---------------------DISKEGFT------ARLIALYG 103
FRW+E + EH ++ D+ K+G +I YG
Sbjct: 32 FRWVERSNLFEHDRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVLMIDSYG 91
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
KA + + + K+F +M E+T+ S++AL + +F F + + GIEP
Sbjct: 92 KAGIVQESVKLFQKMEELGVERTIKSYDALFKVIMRRGRFMMAKRYFNKMLSE-GIEPTR 150
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
++N +I F G +D+A +M+ + I D++T+NT++ G Y + +AEK +
Sbjct: 151 HTFNVMIWGFFLSGKMDTAMRFFEDMKSREISPDVVTYNTMINGCYRVKKMDEAEKYFVE 210
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M N+ P V +Y + G Q AL LV EM+ I P+ T+ L+ G N G
Sbjct: 211 MKGKNIEPTVVTYTTLIKGYVSVDQVHDALRLVEEMKGYGIKPNAITYSTLLPGLCNAGK 270
Query: 284 LEEA----KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCK 324
+ EA K +K + +IF L+ CE G+LD A ++ K
Sbjct: 271 MSEAQSILKEMVDKYIAPKDNSIFMRLISSQCEAGNLDAAADVLK 315
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 87/198 (43%), Gaps = 9/198 (4%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI Y +A ++ +EM G + ++++ LL N+ K E + K++ K
Sbjct: 226 LIKGYVSVDQVHDALRLVEEMKGYGIKPNAITYSTLLPGLCNAGKMSEAQSILKEMVDKY 285
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
D + +I + + G+LD+A +L M + + + + L+ F G+ A
Sbjct: 286 IAPKDNSIFMRLISSQCEAGNLDAAADVLKAMIRLSVPTEAGHYGVLIENFCKAGQHDRA 345
Query: 218 EKIWETMVNMNV--RPNV------RSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVF 269
K+ + ++ ++ RP +YN ++ L QT KA LV ++ + D
Sbjct: 346 VKLLDKLIEKDIILRPQSTLHMEPSAYNPMIEYLCSNGQTAKAEALVRQLLKLGVQ-DTT 404
Query: 270 TFYALIKGFVNEGNLEEA 287
LI+G+ EG+ + A
Sbjct: 405 ALNTLIRGYAQEGSPDSA 422
Score = 44.7 bits (104), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 88/204 (43%), Gaps = 17/204 (8%)
Query: 37 LKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTA 96
LK +VDK+ D I+ + A ++L+ + ++ G
Sbjct: 278 LKEMVDKYIAPKD-------NSIFMRLISSQCEAGNLDAAADVLKAMIRLSVPTEAGHYG 330
Query: 97 RLIALYGKAAMFENARKVFDEM--------PGRNCEQTVLSFNALLGACVNSKKFDEVDG 148
LI + KA + A K+ D++ P ++N ++ ++ + + +
Sbjct: 331 VLIENFCKAGQHDRAVKLLDKLIEKDIILRPQSTLHMEPSAYNPMIEYLCSNGQTAKAEA 390
Query: 149 LFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
L + L KLG++ D + NT+I+ + +GS DSA LL M ++ + + ++ L+ +
Sbjct: 391 LVRQLL-KLGVQ-DTTALNTLIRGYAQEGSPDSAFELLKIMLRRKVDSEKSAYDALVQSY 448
Query: 209 YSNGRFADAEKIWETMVNMNVRPN 232
ADA+ ++M+ + P+
Sbjct: 449 LKKNEPADAKAALDSMIENDHLPD 472
>gi|357465315|ref|XP_003602939.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491987|gb|AES73190.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 586
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 161/345 (46%), Gaps = 20/345 (5%)
Query: 28 IRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYK 87
I I +E + + + F S+ F N Y +Q+LA K+F+ ++ +L HQ Y+
Sbjct: 137 INLIKREKDPQHALKIFNMVSEQKGFNHNNATYATILQKLAQFKKFQAVDRVL-HQMTYE 195
Query: 88 DIS-KEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVL-------SFNALLGACVN 139
EG L+ Y K E KVFD QT++ + ++ L V+
Sbjct: 196 ACKFHEGVFINLMKHYSKCGFHE---KVFDAFLSI---QTIVREKPSPKAISSCLNLLVD 249
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEME-KKGIRLDL 198
S + D V L L +P++ +N ++K +G +DSA ++ EM K ++
Sbjct: 250 SNQVDLVRKLLLYAKRSLVYKPNVCIFNILVKYHCRRGDIDSAFEVVKEMRNSKYSYPNV 309
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETMVNMN-VRPNVRSYNARLDGLAIEKQTKKALELVG 257
IT++TL+ G NGR +A +++E MV+ + + P+ +YN ++G E + +A ++
Sbjct: 310 ITYSTLMDGLCRNGRLKEAFELFEEMVSKDQIVPDPLTYNVLINGFCREGKADRARNVIE 369
Query: 258 EMRSKEINPDVFTFYALIKGFVNEGNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKG 314
M++ P+VF + AL+ G G L++AK SG + + L+ F G
Sbjct: 370 FMKNNGCCPNVFNYSALVDGLCKAGKLQDAKGVLAEMKSSGLKPDAITYTSLINFFSRNG 429
Query: 315 DLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+D A L C D +++ L +E R +EA +++E
Sbjct: 430 QIDEAIELLTEMKENDCQADTVTFNVILGGLCREGRFDEALDMIE 474
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 130/274 (47%), Gaps = 12/274 (4%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQT---VLSFNALLGACVNSKKFDEVDGLFKDLP 154
L+ + + ++A +V EM RN + + V++++ L+ + + E LF+++
Sbjct: 279 LVKYHCRRGDIDSAFEVVKEM--RNSKYSYPNVITYSTLMDGLCRNGRLKEAFELFEEMV 336
Query: 155 HKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRF 214
K I PD ++YN +I F +G D A ++ M+ G ++ ++ L+ G G+
Sbjct: 337 SKDQIVPDPLTYNVLINGFCREGKADRARNVIEFMKNNGCCPNVFNYSALVDGLCKAGKL 396
Query: 215 ADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYAL 274
DA+ + M + ++P+ +Y + ++ + Q +A+EL+ EM+ + D TF +
Sbjct: 397 QDAKGVLAEMKSSGLKPDAITYTSLINFFSRNGQIDEAIELLTEMKENDCQADTVTFNVI 456
Query: 275 IKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERC 331
+ G EG +EA K G +NK +++++ + + +L A L S
Sbjct: 457 LGGLCREGRFDEALDMIEKLPQQGVYLNKGSYRIVLNSLTQNCELRKANKLLGLMLSRGF 516
Query: 332 LVDQAPLQLVVDRLAKELRVEEAK----ELVELG 361
+ A ++ RL KE +A +LV++G
Sbjct: 517 VPHYATSNELLVRLCKEGMANDAATALFDLVDMG 550
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 160/338 (47%), Gaps = 7/338 (2%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
+++ G+ K + + F+ +S+ G + Y+ + L A R ++ E ++
Sbjct: 271 TLMAGLCKTGKIDMALKVFEDNSN-GDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRE 329
Query: 86 YK-DISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
+ FTA + L K + A++V + M RNC V+++++L+ + +
Sbjct: 330 NSCEPDVVTFTALMDGLC-KGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVR 388
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
+ +FK + + GIEP++V+YN++I F +DSA L+ EM G D+IT+NTL
Sbjct: 389 DAQEVFKRMIVR-GIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTL 447
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+ G GR +A +++ M P+V +Y+ + G ++ A L +M + +
Sbjct: 448 IDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAV 507
Query: 265 NPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFN 321
PDV TF L++G+ N G +++A+R + S C + + LV C+ G + A
Sbjct: 508 LPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARR 567
Query: 322 LCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ KR C + ++D + + A L+E
Sbjct: 568 VLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLE 605
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 110/216 (50%), Gaps = 5/216 (2%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A ++F +M + C V++++ L+G ++ D LF D+ K + PD+V+++T++
Sbjct: 460 ANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDM-LKQAVLPDVVTFSTLV 518
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
+ + + G +D A LL EM D+ T+ +L+ GF GR +A ++ + M +
Sbjct: 519 EGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQ 578
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK-- 288
PNV +Y A +D + A L+ EM + P+V T+ +LI GF G+LEEA+
Sbjct: 579 PNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKI 638
Query: 289 --RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
R C + +++++ +C G + A L
Sbjct: 639 LERLERDENCKADMFAYRVMMDGLCRTGRMSAALEL 674
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 129/302 (42%), Gaps = 8/302 (2%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
VI + K N + +D F+ N +T + L A R K+
Sbjct: 100 VIHALCKARNTAKALDYFRSME----CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKK 155
Query: 87 KDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEV 146
+ E LI + K A + EM V++++ ++ K D
Sbjct: 156 GTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTA 215
Query: 147 DGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLL 206
LF+ + G P+LV+YNT++ G +D A LL EM ++G++ D +++TL+
Sbjct: 216 YKLFRQMVEN-GCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMA 274
Query: 207 GFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINP 266
G G+ A K++E N + P+V +Y+ + GL + +A +L +MR P
Sbjct: 275 GLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEP 334
Query: 267 DVFTFYALIKGFVNEGNLEEAKR---WYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLC 323
DV TF AL+ G L+EA++ C N + L+ +C+ G + A +
Sbjct: 335 DVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVF 394
Query: 324 KR 325
KR
Sbjct: 395 KR 396
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 94/191 (49%), Gaps = 2/191 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+ Y A + ++A ++ +EM +C V ++ +L+ + E + K + K
Sbjct: 517 LVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMA-KR 575
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G +P++V+Y +I AF G A LL EM G++ ++IT+ +L+ GF G +A
Sbjct: 576 GCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEA 635
Query: 218 EKIWETMV-NMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
KI E + + N + ++ +Y +DGL + ALEL+ ++ P + ALI+
Sbjct: 636 RKILERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIR 695
Query: 277 GFVNEGNLEEA 287
G L +A
Sbjct: 696 GLCQGKELGKA 706
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 91/220 (41%), Gaps = 10/220 (4%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G + ++ +YN + +A + +D +L GI ++ T+ ++ G +G A
Sbjct: 19 GFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKA 78
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ E M P+ YN + L + T KAL+ RS E +V T+ +I G
Sbjct: 79 CELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDY---FRSMECEKNVITWTIMIDG 135
Query: 278 FVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
L EA ++ K G N+ + +L+ C+ + A+ L K +
Sbjct: 136 LCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPN 195
Query: 335 QAPLQLVVDRLAKELRVEEA----KELVELGKTNSYCRYN 370
V+ ++ +V+ A +++VE G + YN
Sbjct: 196 VVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYN 235
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 87/195 (44%), Gaps = 9/195 (4%)
Query: 73 FRWIEEILEHQKQYKDISKEG-------FTARLIALYGKAAMFENARKVFDEMPGRNCEQ 125
F + ++E ++ K ++K G +TA LI + +A A ++ +EM G +
Sbjct: 556 FCKVGRMVEARRVLKRMAKRGCQPNVVTYTA-LIDAFCRAGKPTVAYRLLEEMVGNGVQP 614
Query: 126 TVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTL 185
V+++ +L+G + +E + + L + D+ +Y ++ G + +A L
Sbjct: 615 NVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAALEL 674
Query: 186 LYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM-VNMNVRPNVRSYNARLDGLA 244
L +++ G + L+ G A ++ E M ++ RPN +Y A + LA
Sbjct: 675 LEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELA 734
Query: 245 IEKQTKKALELVGEM 259
E + ++A L E+
Sbjct: 735 REGRHEEANALADEL 749
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 51/127 (40%)
Query: 190 EKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQT 249
+++G ++ T+N L R + I + + PNV +Y + GL
Sbjct: 16 KQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDL 75
Query: 250 KKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKAIFKLLVPF 309
KA EL+ EMR PD + +I N +A ++ C N + +++
Sbjct: 76 DKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECEKNVITWTIMIDG 135
Query: 310 VCEKGDL 316
+C+ L
Sbjct: 136 LCKANRL 142
>gi|297791089|ref|XP_002863429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297309264|gb|EFH39688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 472
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 132/266 (49%), Gaps = 5/266 (1%)
Query: 64 VQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNC 123
V RL +A +F+ E+I+ K + E + YG+ ++ +VF +M +C
Sbjct: 58 VSRLVSANKFKAAEDIVARMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDC 117
Query: 124 EQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFV-DKGSLDSA 182
+ + ++ +L V + + +K++ ++G+ P + S N +IKA + G++D+
Sbjct: 118 DPSQKAYVTVLAILVEENQLNLAFKFYKNM-REIGLPPTVASLNVLIKALCRNDGTVDAG 176
Query: 183 NTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDG 242
+ +EM K+G D T+ TL+ G GR +A+K++ MV + P V +Y + ++G
Sbjct: 177 LKIFHEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLING 236
Query: 243 LAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMN 299
L K +A+ V EM+ K I P+VFT+ +L+ G +G +A + GC N
Sbjct: 237 LCGSKNVDEAMRYVEEMKGKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPN 296
Query: 300 KAIFKLLVPFVCEKGDLDFAFNLCKR 325
+ L+ +C++ + A L R
Sbjct: 297 MVTYTTLITGLCKEQKIQEAVELLDR 322
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 93/181 (51%), Gaps = 1/181 (0%)
Query: 113 KVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKA 172
K+F EMP R C+ ++ L+ + DE LF ++ K P +V+Y ++I
Sbjct: 178 KIFHEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEK-DCAPTVVTYTSLING 236
Query: 173 FVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPN 232
++D A + EM+ KGI ++ T+++L+ G +GR A +++E M+ RPN
Sbjct: 237 LCGSKNVDEAMRYVEEMKGKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPN 296
Query: 233 VRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN 292
+ +Y + GL E++ ++A+EL+ M + + PD + +I GF EA + +
Sbjct: 297 MVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAVSKFREAANFLD 356
Query: 293 K 293
+
Sbjct: 357 E 357
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 126/285 (44%), Gaps = 11/285 (3%)
Query: 82 HQKQYKDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNS 140
H+ + + +T LI+ + + A+K+F EM ++C TV+++ +L+ S
Sbjct: 181 HEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGS 240
Query: 141 KKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLIT 200
K DE +++ K GIEP++ +Y++++ G A L M +G R +++T
Sbjct: 241 KNVDEAMRYVEEMKGK-GIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVT 299
Query: 201 FNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMR 260
+ TL+ G + +A ++ + M ++P+ Y + G + ++A + EM
Sbjct: 300 YTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAVSKFREAANFLDEMI 359
Query: 261 SKEINPDVFTFYA-------LIKGFVNEGNLEEAKRWYNKSGCGMNKAIFKL--LVPFVC 311
I P+ T+ +++G + + G++ + L LV +C
Sbjct: 360 LGGITPNRLTWNIHVKTSNEVVRGLCTNYPSRAFTLYLSMRSRGISVEVETLDSLVKCLC 419
Query: 312 EKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKE 356
+KG+ A L ++ C+ ++ +L++ V EA +
Sbjct: 420 KKGEFQKAVQLVDEIVTDGCIPNKGTWKLLIGHTLDNTIVGEASD 464
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 69/159 (43%), Gaps = 5/159 (3%)
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKA-LELVGEMRSKEINPDVFTFYALI 275
A K ++ M + + P V S N + L T A L++ EM + +PD +T+ LI
Sbjct: 140 AFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFHEMPKRGCDPDSYTYGTLI 199
Query: 276 KGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCL 332
G G ++EAK+ + + C + L+ +C ++D A + +
Sbjct: 200 SGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYVEEMKGKGIE 259
Query: 333 VDQAPLQLVVDRLAKELRVEEAKELVELGKTNSYCRYNL 371
+ ++D L K+ R +A EL E+ CR N+
Sbjct: 260 PNVFTYSSLMDGLCKDGRSLQAMELFEMMMARG-CRPNM 297
>gi|297610360|ref|NP_001064440.2| Os10g0363500 [Oryza sativa Japonica Group]
gi|110288965|gb|AAP53322.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255679339|dbj|BAF26354.2| Os10g0363500 [Oryza sativa Japonica Group]
Length = 512
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 86/259 (33%), Positives = 134/259 (51%), Gaps = 13/259 (5%)
Query: 110 NARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVD-GLFKDLPHKL---GIEPDLVS 165
+A +V D+MP +T +SFN L+ A D VD G L K+ G+ PD+V+
Sbjct: 233 DAAEVLDKMPEWGVGRTTVSFNTLIAAYCR----DGVDAGPALQLKMKMEQEGLVPDVVT 288
Query: 166 YNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMV 225
Y+TII +G + AN +L EM KG+ + +T+NTL+ G+ + G A A ++ E MV
Sbjct: 289 YDTIIHGLCKEGRMGKANQVLSEMRVKGVMPNTVTYNTLIHGYVALGDNAMAGRVHEEMV 348
Query: 226 NMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLE 285
V ++ +YNA + GL E + KK L+ E+ ++ P+ TF ALI G+ N E
Sbjct: 349 KNRVELDIVTYNALILGLCNEGKMKKVEHLLRELDRAKLEPNASTFSALIVGWCKMQNSE 408
Query: 286 EAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV-DQAPLQLV 341
A + N KSG N +K+++ C+ DL+ A ++ RC+ D+A L
Sbjct: 409 RALQLLNVMKKSGFHPNYTTYKMVISSFCKNKDLEGAVDVMGDMLG-RCIAPDKALLNEF 467
Query: 342 VDRLAKELRVEEAKELVEL 360
D L K ++ A+ L L
Sbjct: 468 FDGLWKAKKLHLAENLRSL 486
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 102/210 (48%), Gaps = 5/210 (2%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A F M V+S N + A + ++ + F+++ + I P++ + N ++
Sbjct: 164 ATLAFRAMRAHGLLPRVVSCNVFISAALGLRRPEIALSFFREM-RRCRISPNIYTANMVL 222
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA-DAEKIWETMVNMNV 229
+AF D G A +L +M + G+ ++FNTL+ + +G A A ++ M +
Sbjct: 223 RAFCDLGRTADAAEVLDKMPEWGVGRTTVSFNTLIAAYCRDGVDAGPALQLKMKMEQEGL 282
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
P+V +Y+ + GL E + KA +++ EMR K + P+ T+ LI G+V G+ A R
Sbjct: 283 VPDVVTYDTIIHGLCKEGRMGKANQVLSEMRVKGVMPNTVTYNTLIHGYVALGDNAMAGR 342
Query: 290 WYN---KSGCGMNKAIFKLLVPFVCEKGDL 316
+ K+ ++ + L+ +C +G +
Sbjct: 343 VHEEMVKNRVELDIVTYNALILGLCNEGKM 372
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 78/171 (45%), Gaps = 3/171 (1%)
Query: 101 LYGKAAMFENAR--KVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLG 158
++G A+ +NA +V +EM E ++++NAL+ N K +V+ L ++L +
Sbjct: 328 IHGYVALGDNAMAGRVHEEMVKNRVELDIVTYNALILGLCNEGKMKKVEHLLREL-DRAK 386
Query: 159 IEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAE 218
+EP+ +++ +I + + + A LL M+K G + T+ ++ F N A
Sbjct: 387 LEPNASTFSALIVGWCKMQNSERALQLLNVMKKSGFHPNYTTYKMVISSFCKNKDLEGAV 446
Query: 219 KIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVF 269
+ M+ + P+ N DGL K+ A L + PDV+
Sbjct: 447 DVMGDMLGRCIAPDKALLNEFFDGLWKAKKLHLAENLRSLNNGLKFIPDVY 497
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 86/374 (22%), Positives = 172/374 (45%), Gaps = 48/374 (12%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
+++ G+ K+N L+ + ++ + GR +T Y V L + ++ +ILE +
Sbjct: 202 ALLNGLCKQNQLEEVSKLLEEMVEAGR-EPDTFSYNTVVACLCESGKYEEAGKILEKMIE 260
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
K L+ + K + + A ++ ++M GR C TV+++ L+G + + +
Sbjct: 261 KKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLAD 320
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL-------------------------- 179
+ +D+ K GI PDLV+YN ++ G L
Sbjct: 321 AYRVMEDM-FKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILV 379
Query: 180 ---------DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
D A LL M ++G + +L+TFNT++ GF G+ + K+ E M ++
Sbjct: 380 NGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCT 439
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
P+V +Y+ +DG + + A ++G I+PD ++ ++++G + G +EEA+
Sbjct: 440 PDVVTYSTLIDGYCKANRMQDAFAILG------ISPDKASYSSMLEGLCSTGKVEEAQEV 493
Query: 291 YN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSER-CLVDQAPLQLVVDRLA 346
+ K GC + + L++ +C+ D A + + SER C + ++++ L
Sbjct: 494 MDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKM-LQVMSERGCEPNLYTYSILINGLC 552
Query: 347 KELRVEEAKELVEL 360
K RVE+A ++++
Sbjct: 553 KTKRVEDAINVLDV 566
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 130/283 (45%), Gaps = 10/283 (3%)
Query: 81 EHQKQYKDISKEGFTARLIA----LYG--KAAMFENARKVFDEMPGRNCEQTVLSFNALL 134
E +K + + + G T +A L G K E K+ +EM E S+N ++
Sbjct: 180 EARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVV 239
Query: 135 GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGI 194
S K++E + + + K PD+V+YN+++ F +D A LL +M +
Sbjct: 240 ACLCESGKYEEAGKILEKMIEK-KCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRC 298
Query: 195 RLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALE 254
+IT+ TL+ GF R ADA ++ E M + P++ +YN LDGL + ++A E
Sbjct: 299 APTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHE 358
Query: 255 LVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVC 311
L+ M K+ PDV T+ L+ G G +++A+ + GC N F ++ C
Sbjct: 359 LLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFC 418
Query: 312 EKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA 354
+ G +D + + C D ++D K R+++A
Sbjct: 419 KAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDA 461
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 136/324 (41%), Gaps = 40/324 (12%)
Query: 76 IEEILEHQKQYKDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL 134
++ L H + S FT LI + + A ++ DEM ++C +N L+
Sbjct: 75 LDRALSHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLI 134
Query: 135 GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGI 194
K D + K + + + PD+++Y ++I +LD A L+ +M++ G+
Sbjct: 135 AGLCKMGKIDAARNVLKMMLERSCV-PDVITYTSLIVGCCQTNALDEARKLMEKMKESGL 193
Query: 195 RLDLITFNTLLLG-----------------------------------FYSNGRFADAEK 219
D + +N LL G +G++ +A K
Sbjct: 194 TPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGK 253
Query: 220 IWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFV 279
I E M+ P+V +YN+ +DG + +A L+ +M + P V T+ LI GF
Sbjct: 254 ILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFS 313
Query: 280 NEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQA 336
L +A R K+G + + L+ +C+ G L+ A L + + C D
Sbjct: 314 RADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVV 373
Query: 337 PLQLVVDRLAKELRVEEAKELVEL 360
++V+ L K +V++A+ L+E+
Sbjct: 374 TYSILVNGLCKLGKVDDARLLLEM 397
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 144/332 (43%), Gaps = 35/332 (10%)
Query: 39 RLVDKFKKSSDLGRFRTNTGI--YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFT- 95
RL D ++ D+ + + + Y + L A + E+LE + KD + + T
Sbjct: 317 RLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVE-KDCAPDVVTY 375
Query: 96 ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE---------- 145
+ L+ K ++AR + + M R C+ +++FN ++ + K DE
Sbjct: 376 SILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKE 435
Query: 146 -------------VDGLFK-----DLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLY 187
+DG K D LGI PD SY+++++ G ++ A ++
Sbjct: 436 VSCTPDVVTYSTLIDGYCKANRMQDAFAILGISPDKASYSSMLEGLCSTGKVEEAQEVMD 495
Query: 188 EMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEK 247
M K+G + ++ G R +A K+ + M PN+ +Y+ ++GL K
Sbjct: 496 LMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTK 555
Query: 248 QTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFK 304
+ + A+ ++ M K PDV T+ +LI GF ++ A + + SGC +K +
Sbjct: 556 RVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYN 615
Query: 305 LLVPFVCEKGDLDFAFNLCKRTFSERCLVDQA 336
+L+ C+ G+++ A + + + C D A
Sbjct: 616 ILISGFCQSGNVEKAIEVMQLMLEKGCNPDAA 647
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 130/296 (43%), Gaps = 14/296 (4%)
Query: 72 RFRWIEEILEHQKQYKDISKEGFT--ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLS 129
+ R +E ++++ D SK + LI + +A + ++ +EM R V++
Sbjct: 2 KVRPLEGYSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVIT 61
Query: 130 FNALLGACVNSKKFDEVDGLFKDLPH---KLGIEPDLVSYNTIIKAFVDKGSLDSANTLL 186
N +L K + ++ L + L H K+ P +Y +I +D A LL
Sbjct: 62 HNTIL------KAYCQIGDLDRALSHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLL 115
Query: 187 YEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIE 246
EM +K D +N L+ G G+ A + + M+ + P+V +Y + + G
Sbjct: 116 DEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQT 175
Query: 247 KQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIF 303
+A +L+ +M+ + PD + AL+ G + LEE + ++G + +
Sbjct: 176 NALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSY 235
Query: 304 KLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+V +CE G + A + ++ ++C D ++D K +++EA+ L+E
Sbjct: 236 NTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLE 291
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 86/173 (49%), Gaps = 1/173 (0%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
E A++V D M + C T + ++G + ++ DE + + + + G EP+L +Y+
Sbjct: 488 EEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSER-GCEPNLYTYSI 546
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
+I ++ A +L M +KG D+ T+ +L+ GF + A + ++TM +
Sbjct: 547 LINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSG 606
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
P+ +YN + G +KA+E++ M K NPD T+++L++ E
Sbjct: 607 CEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLMRSLTTE 659
>gi|410109867|gb|AFV61013.1| pentatricopeptide repeat-containing protein 11, partial
[Acantholippia salsoloides]
Length = 410
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 150/318 (47%), Gaps = 26/318 (8%)
Query: 66 RLANAKRFRWI-----EEILEHQKQ----------YKDISKEGFTARL------IALYGK 104
RL +F W+ +++LEH + YK+I + G+ A L + + K
Sbjct: 82 RLTREHKF-WVPFDTCKKVLEHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCK 140
Query: 105 AAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLV 164
AR VFD + +V+SFN L+ + DE L K H G+EPD+
Sbjct: 141 EGEIRVARSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRL-KSAMHASGVEPDVY 199
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
+Y+ +I + +D AN L EM KG+ + +TF TL+ G NGR A +I++ M
Sbjct: 200 TYSVLINGLCKESKIDGANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 259
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
++ ++ ++ +YN + GL + K+A L+ EMR K + PD T+ LI G EG+L
Sbjct: 260 LSQSLSADLITYNTLIYGLCKKGDLKQAQNLIDEMRMKGLKPDKITYTTLIDGCCKEGDL 319
Query: 285 E---EAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLV 341
E E ++ + ++ ++ L+ +C++G A + + S D ++
Sbjct: 320 ETAFEHRKRMIQENIRLDDVVYTTLISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMI 379
Query: 342 VDRLAKELRVEEAKELVE 359
++ K+ V +L++
Sbjct: 380 INEFCKKGDVWTGSKLLK 397
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 84/173 (48%), Gaps = 1/173 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K + A +++ +M ++ ++++N L+ + L ++ K
Sbjct: 239 LIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQNLIDEMRMK- 297
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD ++Y T+I +G L++A M ++ IRLD + + TL+ G GR DA
Sbjct: 298 GLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVVYTTLISGLCQEGRSVDA 357
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
EK+ M+++ ++P+ +Y ++ + +L+ EM+ P V T
Sbjct: 358 EKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVT 410
>gi|224075357|ref|XP_002304600.1| predicted protein [Populus trichocarpa]
gi|222842032|gb|EEE79579.1| predicted protein [Populus trichocarpa]
Length = 641
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/369 (23%), Positives = 159/369 (43%), Gaps = 44/369 (11%)
Query: 44 FKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYG 103
FK +G ++ + + AN F+ +E++L+ + K + E + YG
Sbjct: 47 FKSGPKMGSYKLGDSTFYSLIDNYANLGDFKSLEKVLDRMRCEKRVVVEKCFVVIFKAYG 106
Query: 104 KAAMFENARKVFDEMPGR-NCEQTVLSFNALLGACVNSKKF------------------- 143
KA + E A +FD M C++TV SFN++L + F
Sbjct: 107 KAHLPEKAVGLFDRMAYEFECKRTVKSFNSVLNVIIQEGLFYRALEFYNHVIGAKGVNIS 166
Query: 144 -------------------DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANT 184
D+ +F+D+P +PD+ +Y T++ +D A +
Sbjct: 167 PNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVS-KCQPDVYTYCTLMDGLCKADRIDEAVS 225
Query: 185 LLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLA 244
LL EM+ G +TFN L+ G G A K+ + M PN +YN + GL
Sbjct: 226 LLDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLC 285
Query: 245 IEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR---WYNKSGCGMNKA 301
++ + +KA+ L+ M S + P+V T+ +I G V +G + R + G +N+
Sbjct: 286 LKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEY 345
Query: 302 IFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELG 361
++ L+ + ++G A L K + C ++ V+D L ++ + +EA E++
Sbjct: 346 VYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLS-E 404
Query: 362 KTNSYCRYN 370
TN+ C+ N
Sbjct: 405 MTNNRCKPN 413
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 126/250 (50%), Gaps = 8/250 (3%)
Query: 113 KVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIK 171
K+ D M + C +++N L+ G C+ K + L + + K P++V+Y TII
Sbjct: 260 KLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSK--CVPNVVTYGTIIN 317
Query: 172 AFVDKG-SLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
V +G +LD A L ME++G ++ ++ L+ G + G+ +A ++++ M
Sbjct: 318 GLVKQGRALDGARVLAL-MEERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECE 376
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA-KR 289
N Y+A +DGL + + +ALE++ EM + P+ +T+ +L+KGF GN +A +
Sbjct: 377 LNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEM 436
Query: 290 WYN--KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAK 347
W + K N+ + +L+ +C+ G + A + + + C D +++ L+
Sbjct: 437 WKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSN 496
Query: 348 ELRVEEAKEL 357
VE+A +L
Sbjct: 497 AGLVEDALQL 506
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 127/316 (40%), Gaps = 7/316 (2%)
Query: 21 PKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEIL 80
P +I G+ K+ +L R V K + L N Y + L + +L
Sbjct: 239 PVTFNVLINGLCKKGDLAR-VAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLL 297
Query: 81 EHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNS 140
+ K + +I K + +V M R ++AL+
Sbjct: 298 DRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYVYSALISGLFKE 357
Query: 141 KKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLIT 200
K E LFK++ K E + + Y+ +I G D A +L EM + + T
Sbjct: 358 GKSQEAMQLFKEMTVK-ECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYT 416
Query: 201 FNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMR 260
+++L+ GF+ G A ++W+ M N N Y+ + GL + + K+A+ + +M
Sbjct: 417 YSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQML 476
Query: 261 SKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGC-----GMNKAIFKLLVPFVCEKGD 315
K PDV + ++I G N G +E+A + YN+ C + + +L+ +C++
Sbjct: 477 GKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQPDVVTYNILLNALCKQSS 536
Query: 316 LDFAFNLCKRTFSERC 331
+ A +L C
Sbjct: 537 ISRAIDLLNSMLDRGC 552
>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 138/277 (49%), Gaps = 11/277 (3%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSK--KFDEVDGLFKDLPHKLGIE 160
K A V ++M V+++N L+ G C + K + D + K++ K GI
Sbjct: 167 KVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAK-GIC 225
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
P+ V+YN +I F ++ A + EM+++G+R +++T+N L+ G S+G+ +A +
Sbjct: 226 PNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVAL 285
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
+ MV+ ++ PNV ++N ++G K +A+ L +M + ++P+ T+ LI +
Sbjct: 286 RDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCK 345
Query: 281 EGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAP 337
+G +E+A YN G + + L+ +C KGD+ A +L S++ D
Sbjct: 346 DGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVT 405
Query: 338 LQLVVDRLAKELRVEEA----KELVELGKTNSYCRYN 370
+++D L K+ +A E+ E G S+ YN
Sbjct: 406 YNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYN 442
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 117/236 (49%), Gaps = 6/236 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K A +VF EM + V+++N L+ + K DE L +D
Sbjct: 234 LIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVAL-RDQMVSS 292
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
+EP++V++N +I F +++ A L +MEK+G+ + +T+ TL+ + +GR DA
Sbjct: 293 DLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDA 352
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ M++ + P V +YN + GL + K A L+ EM SK+++ DV T+ LI
Sbjct: 353 FALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDS 412
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSER 330
+G +A + + + G + + L+ C +G+L A L RT ER
Sbjct: 413 LCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAA--LIVRTRMER 466
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 110/221 (49%), Gaps = 5/221 (2%)
Query: 116 DEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVD 175
D+M + E V++ N L+ +K +E LF D+ K G++P+ ++Y T+I A+
Sbjct: 287 DQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDM-EKQGVDPNAMTYTTLIDAYCK 345
Query: 176 KGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRS 235
G ++ A L M +GI ++ T+N L+ G G A + MV+ + +V +
Sbjct: 346 DGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVT 405
Query: 236 YNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA---KRWYN 292
YN +D L + +++KA++L+ EM K +NP T+ L+ G+ EGNL A +
Sbjct: 406 YNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRME 465
Query: 293 KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV 333
+ G N +L+ C KG L+ A L ER LV
Sbjct: 466 RKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEML-ERGLV 505
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 119/235 (50%), Gaps = 7/235 (2%)
Query: 126 TVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTL 185
+++S N LL V + +++ +++++ K IE +++S+N ++ G L+ A +
Sbjct: 119 SLISCNPLLSGLVKESENGDMEFVYREMI-KRKIELNVISFNIVVNGLCKVGKLNRAGDV 177
Query: 186 LYEMEKKGIRLDLITFNTLLLGFYSNGRFA---DAEKIWETMVNMNVRPNVRSYNARLDG 242
+ +M+ G+ ++IT+NTL+ G+ GR A+ I + MV + PN +YN +DG
Sbjct: 178 IEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDG 237
Query: 243 LAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMN 299
++ A+ + GEM+ + + P+V T+ LI G ++G ++EA ++ S N
Sbjct: 238 FCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPN 297
Query: 300 KAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA 354
+L+ C+ ++ A NL + + ++D K+ R+E+A
Sbjct: 298 VVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDA 352
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 93/206 (45%), Gaps = 6/206 (2%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G + L+S N ++ V + + EM K+ I L++I+FN ++ G G+ A
Sbjct: 115 GFKLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRA 174
Query: 218 EKIWETMVNMNVRPNVRSYNARLDG---LAIEKQTKKALELVGEMRSKEINPDVFTFYAL 274
+ E M V PNV +YN +DG + + KA ++ EM +K I P+ T+ L
Sbjct: 175 GDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNIL 234
Query: 275 IKGFVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERC 331
I GF + N+ A R + + G N + +L+ +C G +D A L + S
Sbjct: 235 IDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDL 294
Query: 332 LVDQAPLQLVVDRLAKELRVEEAKEL 357
+ ++++ K V EA L
Sbjct: 295 EPNVVTHNVLINGFCKNKTVNEAINL 320
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 90/196 (45%), Gaps = 3/196 (1%)
Query: 81 EHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNS 140
+ +KQ D + +T LI Y K E+A +++ M R V ++N L+
Sbjct: 323 DMEKQGVDPNAMTYTT-LIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRK 381
Query: 141 KKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLIT 200
L ++ K + D+V+YN +I + KG A LL EM +KG+ +T
Sbjct: 382 GDVKAARSLMNEMVSK-KLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVT 440
Query: 201 FNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMR 260
+NTL+ G+ G A + M + NV ++N + G ++ + + A L+ EM
Sbjct: 441 YNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEML 500
Query: 261 SKEINPDVFTFYALIK 276
+ + P+ T Y +IK
Sbjct: 501 ERGLVPN-RTTYEIIK 515
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 129/265 (48%), Gaps = 4/265 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I Y E AR++ D M + E ++ +L+ + +E GLF + ++
Sbjct: 290 IIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMV-EI 348
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ P+ V+YNT+I + +KG L+ A + EM KKGI + T+N L+ + GR +A
Sbjct: 349 GLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEA 408
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ + + M + P+ +YN ++G + KKA +L EM SK I P T+ +LI
Sbjct: 409 DDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYV 468
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
++EA + K G + +F +V C G+++ AF L K + D
Sbjct: 469 LSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPD 528
Query: 335 QAPLQLVVDRLAKELRVEEAKELVE 359
+ ++ +E +VEEA+ L++
Sbjct: 529 EVTFNTLMQGRCREGKVEEARMLLD 553
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 122/265 (46%), Gaps = 4/265 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+++L+ K E A ++ EM TV +FN ++ K + F L
Sbjct: 220 MLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKARE-FIGFMEGL 278
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G +P++VSYNTII + +G+++ A +L M KGI D T+ +L+ G GR +A
Sbjct: 279 GFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEA 338
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+++ MV + + PN +YN +DG + ++A EM K I P V T+ L+
Sbjct: 339 SGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHA 398
Query: 278 FVNEGNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
EG + EA + K G + + +L+ G+ AF+L S+
Sbjct: 399 LFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPT 458
Query: 335 QAPLQLVVDRLAKELRVEEAKELVE 359
++ L++ R++EA +L E
Sbjct: 459 HVTYTSLIYVLSRRNRMKEADDLFE 483
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 121/265 (45%), Gaps = 8/265 (3%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI Y E A DEM + +V ++N L+ A + E D + K++ K
Sbjct: 360 LIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEM-RKK 418
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
GI PD ++YN +I + G+ A L EM KGI +T+ +L+ R +A
Sbjct: 419 GIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEA 478
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ ++E +++ V P+V +NA +DG ++A L+ EM K + PD TF L++G
Sbjct: 479 DDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQG 538
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
EG +EEA+ + + G + + L+ +GD+ AF R E +
Sbjct: 539 RCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAF----RVRDEMLSIG 594
Query: 335 QAPLQLVVDRLAKELRVEEAKELVE 359
P L + L K L + +L E
Sbjct: 595 FNPTLLTYNALIKCLCKNQEGDLAE 619
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 121/224 (54%), Gaps = 8/224 (3%)
Query: 65 QRLANAKR-FRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNC 123
R NAK+ F E+L + ++ +T+ + L + M E A +F+++ +
Sbjct: 435 SRCGNAKKAFDLHNEMLSKGIEPTHVT---YTSLIYVLSRRNRMKE-ADDLFEKILDQGV 490
Query: 124 EQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSA 182
V+ FNA++ G C N + L K++ K + PD V++NT+++ +G ++ A
Sbjct: 491 SPDVIMFNAMVDGHCANGN-VERAFMLLKEMDRK-SVPPDEVTFNTLMQGRCREGKVEEA 548
Query: 183 NTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDG 242
LL EM+++GI+ D I++NTL+ G+ G DA ++ + M+++ P + +YNA +
Sbjct: 549 RMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKC 608
Query: 243 LAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEE 286
L ++ A EL+ EM +K I+PD T+ +LI+G N L E
Sbjct: 609 LCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVE 652
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 119/254 (46%), Gaps = 7/254 (2%)
Query: 112 RKVFDEMP---GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
R++FDE+ R ++ + F+ L+ C ++ DE F + K GI P + + N
Sbjct: 161 RELFDELTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEK-GIVPKIETCND 219
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
++ F+ ++ A L EM + I + TFN ++ G+ A + M +
Sbjct: 220 MLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLG 279
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
+PNV SYN + G + + A ++ MR K I PD +T+ +LI G EG LEEA
Sbjct: 280 FKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEAS 339
Query: 289 RWYNKS---GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRL 345
++K G N + L+ C KGDL+ AF+ + + + L+V L
Sbjct: 340 GLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHAL 399
Query: 346 AKELRVEEAKELVE 359
E R+ EA ++++
Sbjct: 400 FMEGRMGEADDMIK 413
>gi|224133408|ref|XP_002321560.1| predicted protein [Populus trichocarpa]
gi|222868556|gb|EEF05687.1| predicted protein [Populus trichocarpa]
Length = 491
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 120/267 (44%), Gaps = 36/267 (13%)
Query: 102 YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL---- 157
Y A A KVF M C Q + SFN +L SK+ + LFK K
Sbjct: 146 YASAGKPHRAVKVFLSMHQFGCFQDLQSFNTILDVLCKSKRVEMAYNLFKVFKGKFRADC 205
Query: 158 -----------------------------GIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
G+ P+L SYNT++K + G ++ A E
Sbjct: 206 VSYNVMVNGWCLIKRTNKALEMLKEMVKRGLTPNLTSYNTMLKGYFRAGQINEAWDFFLE 265
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
M+K+ +D+IT+ T++ GF G A K+++TMV V P+V +YNA + L +
Sbjct: 266 MKKRDCEIDVITYTTVIHGFGVAGEIKRARKVFDTMVKKGVLPSVATYNAFIQVLCKKDN 325
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKL 305
A+ + EM K P+ T+ +I+G + G +E A + + GC N + L
Sbjct: 326 VDNAIVIFEEMVVKGYVPNSITYNLVIRGLCHRGEMERAMEFMGRMKDDGCEPNVQTYNL 385
Query: 306 LVPFVCEKGDLDFAFNLCKRTFSERCL 332
++ + C++G++D A +L ++ S CL
Sbjct: 386 VIRYFCDEGEIDKALDLFQKMTSGDCL 412
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 106/222 (47%), Gaps = 6/222 (2%)
Query: 80 LEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
LE +K+ +I +T +I +G A + ARKVFD M + +V ++NA +
Sbjct: 264 LEMKKRDCEIDVITYTT-VIHGFGVAGEIKRARKVFDTMVKKGVLPSVATYNAFIQVLCK 322
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
D +F+++ K G P+ ++YN +I+ +G ++ A + M+ G ++
Sbjct: 323 KDNVDNAIVIFEEMVVK-GYVPNSITYNLVIRGLCHRGEMERAMEFMGRMKDDGCEPNVQ 381
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKAL---ELV 256
T+N ++ F G A +++ M + + PN+ +YN + + + K++ L L+
Sbjct: 382 TYNLVIRYFCDEGEIDKALDLFQKMTSGDCLPNLDTYNILISAMFVRKKSDDLLVAGNLL 441
Query: 257 GEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN-KSGCG 297
EM + P FTF ++ G + GN AK +S CG
Sbjct: 442 IEMVDRGFVPRKFTFNRVLNGLLLTGNQGFAKEILRLQSRCG 483
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 102/234 (43%), Gaps = 13/234 (5%)
Query: 51 GRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIAL------YGK 104
G+FR + Y V KR E+L K++ K G T L + Y +
Sbjct: 199 GKFRADCVSYNVMVNGWCLIKRTNKALEML------KEMVKRGLTPNLTSYNTMLKGYFR 252
Query: 105 AAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLV 164
A A F EM R+CE V+++ ++ + + +F + K G+ P +
Sbjct: 253 AGQINEAWDFFLEMKKRDCEIDVITYTTVIHGFGVAGEIKRARKVFDTMVKK-GVLPSVA 311
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
+YN I+ K ++D+A + EM KG + IT+N ++ G G A + M
Sbjct: 312 TYNAFIQVLCKKDNVDNAIVIFEEMVVKGYVPNSITYNLVIRGLCHRGEMERAMEFMGRM 371
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGF 278
+ PNV++YN + E + KAL+L +M S + P++ T+ LI
Sbjct: 372 KDDGCEPNVQTYNLVIRYFCDEGEIDKALDLFQKMTSGDCLPNLDTYNILISAM 425
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 98/223 (43%), Gaps = 10/223 (4%)
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
+LG P ++ I + + G A + M + G DL +FNT+L + R
Sbjct: 131 RLGPTPK--TFAIIAERYASAGKPHRAVKVFLSMHQFGCFQDLQSFNTILDVLCKSKRVE 188
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
A +++ R + SYN ++G + K+T KALE++ EM + + P++ ++ ++
Sbjct: 189 MAYNLFKVFKG-KFRADCVSYNVMVNGWCLIKRTNKALEMLKEMVKRGLTPNLTSYNTML 247
Query: 276 KGFVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCL 332
KG+ G + EA ++ K C ++ + ++ G++ A + + L
Sbjct: 248 KGYFRAGQINEAWDFFLEMKKRDCEIDVITYTTVIHGFGVAGEIKRARKVFDTMVKKGVL 307
Query: 333 VDQAPLQLVVDRLAKELRVEEA----KELVELGKTNSYCRYNL 371
A + L K+ V+ A +E+V G + YNL
Sbjct: 308 PSVATYNAFIQVLCKKDNVDNAIVIFEEMVVKGYVPNSITYNL 350
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 129/265 (48%), Gaps = 4/265 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I Y E AR++ D M + E ++ +L+ + +E GLF + ++
Sbjct: 268 IIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMV-EI 326
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ P+ V+YNT+I + +KG L+ A + EM KKGI + T+N L+ + GR +A
Sbjct: 327 GLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEA 386
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ + + M + P+ +YN ++G + KKA +L EM SK I P T+ +LI
Sbjct: 387 DDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYV 446
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
++EA + K G + +F +V C G+++ AF L K + D
Sbjct: 447 LSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPD 506
Query: 335 QAPLQLVVDRLAKELRVEEAKELVE 359
+ ++ +E +VEEA+ L++
Sbjct: 507 EVTFNTLMQGRCREGKVEEARMLLD 531
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 122/265 (46%), Gaps = 4/265 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+++L+ K E A ++ EM TV +FN ++ K + F L
Sbjct: 198 MLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKARE-FIGFMEGL 256
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G +P++VSYNTII + +G+++ A +L M KGI D T+ +L+ G GR +A
Sbjct: 257 GFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEA 316
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+++ MV + + PN +YN +DG + ++A EM K I P V T+ L+
Sbjct: 317 SGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHA 376
Query: 278 FVNEGNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
EG + EA + K G + + +L+ G+ AF+L S+
Sbjct: 377 LFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPT 436
Query: 335 QAPLQLVVDRLAKELRVEEAKELVE 359
++ L++ R++EA +L E
Sbjct: 437 HVTYTSLIYVLSRRNRMKEADDLFE 461
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 121/265 (45%), Gaps = 8/265 (3%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI Y E A DEM + +V ++N L+ A + E D + K++ K
Sbjct: 338 LIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEM-RKK 396
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
GI PD ++YN +I + G+ A L EM KGI +T+ +L+ R +A
Sbjct: 397 GIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEA 456
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ ++E +++ V P+V +NA +DG ++A L+ EM K + PD TF L++G
Sbjct: 457 DDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQG 516
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
EG +EEA+ + + G + + L+ +GD+ AF R E +
Sbjct: 517 RCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAF----RVRDEMLSIG 572
Query: 335 QAPLQLVVDRLAKELRVEEAKELVE 359
P L + L K L + +L E
Sbjct: 573 FNPTLLTYNALIKCLCKNQEGDLAE 597
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 121/224 (54%), Gaps = 8/224 (3%)
Query: 65 QRLANAKR-FRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNC 123
R NAK+ F E+L + ++ +T+ + L + M E A +F+++ +
Sbjct: 413 SRCGNAKKAFDLHNEMLSKGIEPTHVT---YTSLIYVLSRRNRMKE-ADDLFEKILDQGV 468
Query: 124 EQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSA 182
V+ FNA++ G C N + L K++ K + PD V++NT+++ +G ++ A
Sbjct: 469 SPDVIMFNAMVDGHCANGN-VERAFMLLKEMDRK-SVPPDEVTFNTLMQGRCREGKVEEA 526
Query: 183 NTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDG 242
LL EM+++GI+ D I++NTL+ G+ G DA ++ + M+++ P + +YNA +
Sbjct: 527 RMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKC 586
Query: 243 LAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEE 286
L ++ A EL+ EM +K I+PD T+ +LI+G N L E
Sbjct: 587 LCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVE 630
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 119/254 (46%), Gaps = 7/254 (2%)
Query: 112 RKVFDEMP---GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
R++FDE+ R ++ + F+ L+ C ++ DE F + K GI P + + N
Sbjct: 139 RELFDELTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEK-GIVPKIETCND 197
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
++ F+ ++ A L EM + I + TFN ++ G+ A + M +
Sbjct: 198 MLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLG 257
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
+PNV SYN + G + + A ++ MR K I PD +T+ +LI G EG LEEA
Sbjct: 258 FKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEAS 317
Query: 289 RWYNKS---GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRL 345
++K G N + L+ C KGDL+ AF+ + + + L+V L
Sbjct: 318 GLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHAL 377
Query: 346 AKELRVEEAKELVE 359
E R+ EA ++++
Sbjct: 378 FMEGRMGEADDMIK 391
>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 137/281 (48%), Gaps = 10/281 (3%)
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
F L L KA + + A K+FDEM E V++++ ++ L K +
Sbjct: 13 FNTLLSGLCSKAKIMD-AVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQLLKKM 71
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
K G +P++V+YNTII + + A EM K+GI D+ T++++L GF + GR
Sbjct: 72 EEK-GCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGR 130
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
+A +++ MV NV PN ++ +DGL ++ +A + M K + PDV+T+ A
Sbjct: 131 VNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNA 190
Query: 274 LIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSER 330
L+ G+ + ++EA++ +N + GC N + +L+ C+ G +D A L +
Sbjct: 191 LVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKS 250
Query: 331 CLVDQAPLQLVVDRLAKELRVEEAKELVELGKTNSYCRYNL 371
D ++ + R +EA+EL++ C Y L
Sbjct: 251 LTPDIFTYSTLMRGFCQVGRPQEAQELLK-----EMCSYGL 286
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 111/233 (47%), Gaps = 1/233 (0%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMP 119
Y+ + N R + + + I + LI K M A VF+ M
Sbjct: 118 YSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMT 177
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL 179
+ E V ++NAL+ + + DE LF + K G P++ SYN +I G +
Sbjct: 178 EKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRK-GCAPNVRSYNILINGHCKSGRI 236
Query: 180 DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNAR 239
D A LL EM K + D+ T++TL+ GF GR +A+++ + M + + PN+ +Y+
Sbjct: 237 DEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIV 296
Query: 240 LDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN 292
LDGL +A EL+ M+ +I P++F + LI+G G LE A+ ++
Sbjct: 297 LDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFS 349
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 117/249 (46%), Gaps = 4/249 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+ Y + + A+K+F+ M + C V S+N L+ S + DE GL ++ HK
Sbjct: 191 LVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHK- 249
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
+ PD+ +Y+T+++ F G A LL EM G+ +LIT++ +L G +G +A
Sbjct: 250 SLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEA 309
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ + M + PN+ Y ++G+ + + A EL + K I P V T+ +I G
Sbjct: 310 FELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISG 369
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
+ G EA + + +GC N + +++ GD A L + + D
Sbjct: 370 LLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSAD 429
Query: 335 QAPLQLVVD 343
+ +++ D
Sbjct: 430 SSTFRMLSD 438
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 123/257 (47%), Gaps = 4/257 (1%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K + A F EM V +++++L N + +E LFK + + + P+
Sbjct: 92 KDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVER-NVIPNK 150
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
V++ +I K + A + M +KG+ D+ T+N L+ G+ S + +A+K++
Sbjct: 151 VTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNI 210
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M PNVRSYN ++G + +A L+ EM K + PD+FT+ L++GF G
Sbjct: 211 MDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGR 270
Query: 284 LEEAKRWYNKS---GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL 340
+EA+ + G N + +++ +C+ G LD AF L K + + +
Sbjct: 271 PQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTI 330
Query: 341 VVDRLAKELRVEEAKEL 357
+++ + ++E A+EL
Sbjct: 331 LIEGMCTFGKLEAAREL 347
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 107/206 (51%), Gaps = 5/206 (2%)
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
KLG++P LV++NT++ K + A L EM K G D+IT++T++ G G
Sbjct: 3 KLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTT 62
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
A ++ + M +PNV +YN +D L ++ +A++ EM + I PDVFT+ +++
Sbjct: 63 MALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSIL 122
Query: 276 KGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCL 332
GF N G + EA + + NK F +L+ +C+K + A+ L T +E+ L
Sbjct: 123 HGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAW-LVFETMTEKGL 181
Query: 333 -VDQAPLQLVVDRLAKELRVEEAKEL 357
D +VD +++EA++L
Sbjct: 182 EPDVYTYNALVDGYCSRSQMDEAQKL 207
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 87/193 (45%), Gaps = 2/193 (1%)
Query: 83 QKQYKDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSK 141
+ +K ++ + FT + L+ + + + A+++ EM +++++ +L
Sbjct: 245 EMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHG 304
Query: 142 KFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITF 201
DE L K + + IEP++ Y +I+ G L++A L + KGI+ ++T+
Sbjct: 305 HLDEAFELLKAM-QESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTY 363
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS 261
++ G G +A +++ M PN +YN + G T A+ L+ EM
Sbjct: 364 TVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVG 423
Query: 262 KEINPDVFTFYAL 274
K + D TF L
Sbjct: 424 KGFSADSSTFRML 436
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 125/265 (47%), Gaps = 8/265 (3%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L + K ++A ++F +P + +++NA++ D K++ +
Sbjct: 201 LTRAFCKTGRLKDALEIFRNIPSPD----AIAYNAIIHGHCRKNDCDGALEFLKEMNER- 255
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
+ PD+ +YN +I D A+ +L+EM +G+ D +TFN+++ G G+F A
Sbjct: 256 KVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERA 315
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ M N RP+ +YN + GL ++ +A +LV E S PDV T+ L G
Sbjct: 316 HSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADG 375
Query: 278 FVNEGNLEEA---KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
G ++EA + + GC N + L+ +C+ + A+ L + S + D
Sbjct: 376 LCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPD 435
Query: 335 QAPLQLVVDRLAKELRVEEAKELVE 359
++VD L KE R+++A ++VE
Sbjct: 436 VVTYTIIVDGLCKEGRLDKALKMVE 460
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 128/259 (49%), Gaps = 7/259 (2%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K + A ++ EM G+ C ++++N L+ + K ++ L + L G PD+
Sbjct: 378 KRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSS-GFVPDV 436
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
V+Y I+ +G LD A ++ M K+G +IT+ L+ G GR +A I++
Sbjct: 437 VTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKE 496
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
MV+ + + +Y + ++G +TK+A ++V +R P + + AL+ G+ EG
Sbjct: 497 MVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRG---TPYIDVYNALMDGYCKEGR 553
Query: 284 LEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL 340
L+E + GC N + +++ +C+ G +D AF + S C+ D +
Sbjct: 554 LDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNI 613
Query: 341 VVDRLAKELRVEEAKELVE 359
++D L K + +EA+++++
Sbjct: 614 IIDGLFKASKPKEARQVLD 632
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 127/291 (43%), Gaps = 36/291 (12%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
KA FE A + M RNC + ++N L+ + D L + G PD+
Sbjct: 308 KAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSS-GFVPDV 366
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
V+Y+ + +G +D A L+ EM KG +L+T+NTL+ G + A ++ E+
Sbjct: 367 VTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLES 426
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
+V+ P+V +Y +DGL E + KAL++V M + P V T+ AL++G G
Sbjct: 427 LVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGR 486
Query: 284 LEEAKRWYNK---SGCGMNKAIFKLLV----------------------PFV-------- 310
++EA + + C + + LV P++
Sbjct: 487 VDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMD 546
Query: 311 --CEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
C++G LD N+ + C+ + +V+D L K +V+EA +E
Sbjct: 547 GYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLE 597
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 117/260 (45%), Gaps = 8/260 (3%)
Query: 102 YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEP 161
Y K + VF++M R C + ++N ++ K DE + + H G P
Sbjct: 548 YCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESM-HSAGCVP 606
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
D+VSYN II A +L +M + GI D +T+NTL+ F RF DA I
Sbjct: 607 DVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGIL 666
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM-RSKEINPDVFTFYALIKGFVN 280
+ M+ V P+ +YN + GL+ + A EL+ EM R+ + T+ +I
Sbjct: 667 KNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCK 726
Query: 281 EGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAP 337
EG L++A + G N + + + +C++G LD A +L + R D+
Sbjct: 727 EGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLR---DEVS 783
Query: 338 LQLVVDRLAKELRVEEAKEL 357
V+ L K +++ A +L
Sbjct: 784 YTTVIIGLCKAEQLDRASKL 803
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 117/273 (42%), Gaps = 35/273 (12%)
Query: 121 RNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLD 180
R + + + N L + + D + +F+ + G PD +Y+ +IK+ +D
Sbjct: 119 RGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDA-GYAPDSYTYHLVIKSLCQMNQID 177
Query: 181 SANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW------------------- 221
A T+L + + +G + ++ + L F GR DA +I+
Sbjct: 178 KAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPSPDAIAYNAIIHGHC 237
Query: 222 ---------ETMVNMN---VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVF 269
E + MN V P+V +YN +DGL +T KA E++ EM + + PD
Sbjct: 238 RKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTV 297
Query: 270 TFYALIKGFVNEGNLEEAKRW---YNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRT 326
TF +++ G G E A + C + + L+ +C++ ++D A +L
Sbjct: 298 TFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEF 357
Query: 327 FSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
S + D ++ D L K R++EA ELV+
Sbjct: 358 VSSGFVPDVVTYSILADGLCKRGRIDEAFELVK 390
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 116/259 (44%), Gaps = 16/259 (6%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE----VDGLFKDLPHKLGIEPDLV 164
+ A +F EM ++C L++ +L+ S + E VDG+ P +
Sbjct: 488 DEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRG--------TPYID 539
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
YN ++ + +G LD + +M +G ++ T+N ++ G +G+ +A E+M
Sbjct: 540 VYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESM 599
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
+ P+V SYN +DGL + K+A +++ +M I PD T+ L+ F E
Sbjct: 600 HSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERF 659
Query: 285 EEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPL-QL 340
++A K+G + + L+ + + L A+ L C+V
Sbjct: 660 DDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNT 719
Query: 341 VVDRLAKELRVEEAKELVE 359
++DRL KE +++A L++
Sbjct: 720 IIDRLCKEGCLKQALLLMD 738
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 119/296 (40%), Gaps = 44/296 (14%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
KA+ + AR+V D+M +++N L+ ++FD+ G+ K++ K G++PD
Sbjct: 620 KASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMI-KAGVDPDN 678
Query: 164 VSYNT------------------------------------IIKAFVDKGSLDSANTLLY 187
V+YNT II +G L A L+
Sbjct: 679 VTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMD 738
Query: 188 EMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEK 247
M G+ + +T+N + GR +A + M + R V SY + GL +
Sbjct: 739 HMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTL--RDEV-SYTTVIIGLCKAE 795
Query: 248 QTKKALELVGEMRS-KEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIF 303
Q +A +L EM + K + TF LI F L+EA + GC + +
Sbjct: 796 QLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITY 855
Query: 304 KLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+++ +C+ +D A+ L + +++ L + R +EA +++E
Sbjct: 856 NMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLE 911
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 94/245 (38%), Gaps = 45/245 (18%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I + KE LK+ + + G NT Y + RL R +L
Sbjct: 719 TIIDRLCKEGCLKQALLLMDHMTGHG-VEANTVTYNIFIDRLCKEGRLDEASSLLSEMDT 777
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
+D + +T +I L KA + A K+ EM A+ G C+ S F
Sbjct: 778 LRD--EVSYTTVIIGLC-KAEQLDRASKLAREMV------------AVKGLCITSHTF-- 820
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
N +I AF LD A TLL M ++G +IT+N ++
Sbjct: 821 ---------------------NLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVI 859
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRS---YNARLDGLAIEKQTKKALELVGEMRSK 262
+ +K WE M VR V S Y + GL + + K+AL+++ EM S
Sbjct: 860 TCLC---KLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASS 916
Query: 263 EINPD 267
+ D
Sbjct: 917 DCEID 921
>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
Length = 629
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 119/236 (50%), Gaps = 8/236 (3%)
Query: 101 LYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIE 160
L+ KA+ A + D+M R C+ ++++ A++ D L K + K IE
Sbjct: 197 LHNKAS---EAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKM-EKGKIE 252
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
D+V YNTII +D A L +ME KGIR D+ T+N+L+ + GR++DA ++
Sbjct: 253 ADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRL 312
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
M+ + PNV +++A +D E + +A +L EM + I+PD+FT+ +LI GF
Sbjct: 313 LSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 372
Query: 281 EGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV 333
L+EAK + C N + L+ C+ ++ L R S+R LV
Sbjct: 373 HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF-REMSQRGLV 427
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 141/292 (48%), Gaps = 5/292 (1%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I G+ K ++ F K G R + Y + L N R+ +L + +
Sbjct: 260 TIIDGLCKYKHIDDAFALFNKMETKG-IRPDVFTYNSLISCLCNYGRWSDASRLLSNMIE 318
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
K + LI + K A K++DEM R+ + + ++++L+ + DE
Sbjct: 319 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 378
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
+F+ + K P++V+YNT+IK F ++ L EM ++G+ + +T+NTL+
Sbjct: 379 AKHMFELMISK-DCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLI 437
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEIN 265
G + G A+KI++ MV+ V P++ +Y+ LDGL + +KAL + ++ ++
Sbjct: 438 QGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME 497
Query: 266 PDVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKG 314
PD++T+ +I+G G +E+ + + G N I+ ++ C KG
Sbjct: 498 PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKG 549
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 111/218 (50%), Gaps = 4/218 (1%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
++A +F EM +++ FN LL A KKFD V L + + L I DL SYN
Sbjct: 61 LDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERM-QNLRISYDLYSYN 119
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
+I F + L A +L +M K G D++T ++LL G+ + R +DA + + MV M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 179
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+P+ ++N + GL + + +A+ LV +M + PD+ T+ A++ G G+++ A
Sbjct: 180 GYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLA 239
Query: 288 KRWYNKSGCGMNKA---IFKLLVPFVCEKGDLDFAFNL 322
K G +A I+ ++ +C+ +D AF L
Sbjct: 240 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFAL 277
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 149/327 (45%), Gaps = 13/327 (3%)
Query: 31 IYKENNLKRLVDKFKKSSDLGRFRTNT---GIYTGTVQRLANAKRFRWIEEILEHQKQYK 87
++ N+L + + + SD R +N I V A F +++E +K Y
Sbjct: 290 VFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 349
Query: 88 DISKEG-----FT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSK 141
++ K FT + LI + + A+ +F+ M ++C V+++N L+ +K
Sbjct: 350 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 409
Query: 142 KFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITF 201
+ +E LF+++ + G+ + V+YNT+I+ G D A + +M G+ D+IT+
Sbjct: 410 RVEEGMELFREMSQR-GLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITY 468
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS 261
+ LL G G+ A ++E + + P++ +YN ++G+ + + +L +
Sbjct: 469 SILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 528
Query: 262 KEINPDVFTFYALIKGFVNEGNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDF 318
K + P+V + +I GF +G EEA R + G + + L+ GD
Sbjct: 529 KGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAA 588
Query: 319 AFNLCKRTFSERCLVDQAPLQLVVDRL 345
+ L K S + D + + +V++ L
Sbjct: 589 SAELIKEMRSCGFVGDASTISMVINML 615
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 123/255 (48%), Gaps = 4/255 (1%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
F+ AR +F M + E ++N+ + + +E GL + G+ P+ V+YN
Sbjct: 267 FQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEG-GLVPNAVTYN 325
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
+I + +KG LD A EM KGI L+T+N + + GR DA+ + + M
Sbjct: 326 ALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREK 385
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+ P+ ++N ++G K+A L+ EM K I P + T+ +LI ++EA
Sbjct: 386 GMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEA 445
Query: 288 KRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDR 344
++K G + +F L+ C G++D AF L K + + L D+ ++
Sbjct: 446 DALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQG 505
Query: 345 LAKELRVEEAKELVE 359
+E +VEEA++L++
Sbjct: 506 YCREGKVEEARQLLD 520
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 122/222 (54%), Gaps = 8/222 (3%)
Query: 66 RLANAKR-FRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCE 124
R +AKR F ++E++ Q ++ +T+ LI + GK + A +F ++
Sbjct: 403 RCGDAKRAFGLLDEMVGKGIQPTLVT---YTS-LIYVLGKRNRMKEADALFSKIQQEGLL 458
Query: 125 QTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSAN 183
++ FNAL+ G C N D L K++ + + + PD ++YNT+++ + +G ++ A
Sbjct: 459 PDIIVFNALIDGHCANGN-IDRAFQLLKEMDN-MKVLPDEITYNTLMQGYCREGKVEEAR 516
Query: 184 TLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
LL EM+++GI+ D I++NTL+ G+ G DA ++ + M+ P + +YNA + GL
Sbjct: 517 QLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGL 576
Query: 244 AIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLE 285
++ + A EL+ EM SK I PD T+ ++I+ +LE
Sbjct: 577 CKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAMETVDDLE 618
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 120/277 (43%), Gaps = 21/277 (7%)
Query: 112 RKVFDEMP---GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
R +FDE+ R +T L F+ L+ A KK +E F + K G P++ + N
Sbjct: 128 RTIFDELALARDRVDAKTTLIFDLLVRAYCELKKPNEALECFYLIKEK-GFVPNIETCNQ 186
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
++ F+ A L EM + IR L TFN ++ G+ A++ M +
Sbjct: 187 MLSLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLG 246
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
V+PNV +YN + G + + ++A + M+ K + PD +T+ + I G EG LEEA
Sbjct: 247 VKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEAS 306
Query: 289 RWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRL 345
K G N + L+ C KGDLD A+ S+ + L + L
Sbjct: 307 GLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHAL 366
Query: 346 AKELRVEEA----KELVELGK----------TNSYCR 368
E R+ +A KE+ E G N YCR
Sbjct: 367 FMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCR 403
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 132/277 (47%), Gaps = 13/277 (4%)
Query: 80 LEHQKQYKD--ISKEGFTARLIA--LYGKAAMFE----NARKVFDEMPGRNCEQTVLSFN 131
L+ Y+D ISK G A L+ L+ A E +A + EM + ++ N
Sbjct: 337 LDKAYAYRDEMISK-GIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHN 395
Query: 132 ALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEK 191
L+ GL ++ K GI+P LV+Y ++I + + A+ L ++++
Sbjct: 396 ILINGYCRCGDAKRAFGLLDEMVGK-GIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQ 454
Query: 192 KGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKK 251
+G+ D+I FN L+ G +NG A ++ + M NM V P+ +YN + G E + ++
Sbjct: 455 EGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEE 514
Query: 252 ALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVP 308
A +L+ EM+ + I PD ++ LI G+ G++++A R ++ +G + L+
Sbjct: 515 ARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQ 574
Query: 309 FVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRL 345
+C+ + + A L K S+ D + +++ +
Sbjct: 575 GLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAM 611
>gi|147778708|emb|CAN60667.1| hypothetical protein VITISV_028261 [Vitis vinifera]
Length = 393
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 138/270 (51%), Gaps = 6/270 (2%)
Query: 21 PKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEIL 80
P+ + + G+ ++ ++D K D F+ N +YT + +LA A+ F IE+++
Sbjct: 52 PREVLKIFDGLRNPESVMPVLDSVCKRKD---FKPNEALYTLVINKLAQARMFDAIEDVI 108
Query: 81 EHQKQYKDIS-KEGFTARLIALYGK-AAMFENARKVFDEMPGRNCEQTVLSFNALLGACV 138
+ K K + F +I +YG A + A + +MP +C +V +FN +L V
Sbjct: 109 KTLKIDKQCRLSDVFFYNVIKVYGNVAGRPDRAVETLFDMPKFHCWPSVKTFNLVLNMLV 168
Query: 139 NSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL 198
++K+FD V ++ P +LG+E D N ++K G++D+A LL E K+ R ++
Sbjct: 169 SAKRFDVVHKVYAGAP-ELGVEIDACCLNILVKGLCRSGNVDAACELLDEYPKQRCRPNV 227
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
TF+TL+ G +GR A + E M V P+ +N + GL + ++ +EL+G
Sbjct: 228 RTFSTLMHGLCESGRVEGALGLLERMEREGVYPDTVVFNILISGLRKRGRVEEGMELLGR 287
Query: 259 MRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
M+ K P+ ++ ++ G ++ G +AK
Sbjct: 288 MKLKGCYPNAGSYQEVLYGVLDTGRFGKAK 317
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 100/230 (43%), Gaps = 3/230 (1%)
Query: 49 DLGRFRTNTGIYTG--TVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAA 106
D+ +F + T + L +AKRF + ++ + L+ ++
Sbjct: 147 DMPKFHCWPSVKTFNLVLNMLVSAKRFDVVHKVYAGAPELGVEIDACCLNILVKGLCRSG 206
Query: 107 MFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSY 166
+ A ++ DE P + C V +F+ L+ S + + GL + + + G+ PD V +
Sbjct: 207 NVDAACELLDEYPKQRCRPNVRTFSTLMHGLCESGRVEGALGLLERM-EREGVYPDTVVF 265
Query: 167 NTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVN 226
N +I +G ++ LL M+ KG + ++ +L G GRF A++ M++
Sbjct: 266 NILISGLRKRGRVEEGMELLGRMKLKGCYPNAGSYQEVLYGVLDTGRFGKAKEFMCQMID 325
Query: 227 MNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
V P+ SY + GL E + ++ +M + P+ + + +++
Sbjct: 326 EGVSPSFVSYKMVIYGLCKENLVADVVWILKQMVEQGFVPERWMWRRILQ 375
>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
Length = 1098
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 141/299 (47%), Gaps = 9/299 (3%)
Query: 70 AKRFRWIEEILEHQKQYKDISKEGFTARLIAL------YGKAAMFENARKVFDEMPGRNC 123
AK + ++ ++ + ++++K G L+A Y + +AR++ D +PGR
Sbjct: 250 AKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQTNDARRMLDSLPGRGF 309
Query: 124 EQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSAN 183
++++ L+ N K +E +G+ +++ + D + +I + G ++ A
Sbjct: 310 SPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAA 369
Query: 184 TLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
LL EM ++++L +N ++ G+ GR +A I M + VRP+ SYN+ +DG
Sbjct: 370 RLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGY 429
Query: 244 AIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR-WY--NKSGCGMNK 300
+ KA E M T+ AL+KGF + G++++A R W+ K G N+
Sbjct: 430 CKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNE 489
Query: 301 AIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
L+ + G + A NL K T + + V++ L K R+ EA+ELV+
Sbjct: 490 ISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVD 548
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 100/200 (50%), Gaps = 9/200 (4%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GAC---VNSKKFDEVDGLFKDL 153
+I Y K A + EM G S+N+L+ G C + +K F+ + + ++
Sbjct: 390 MINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRN- 448
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
G ++YN ++K F GS+D A L + M KKGI + I+ +TLL GF+ +G+
Sbjct: 449 ----GFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGK 504
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
A +W+ + + N ++N ++GL ++ +A ELV +M+ PD+ T+
Sbjct: 505 TEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRT 564
Query: 274 LIKGFVNEGNLEEAKRWYNK 293
L G+ G+++ A R N+
Sbjct: 565 LFSGYCKIGDMDRASRILNE 584
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 100/183 (54%), Gaps = 3/183 (1%)
Query: 99 IALYG--KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHK 156
I ++G K E+A+ + ++ + ++++L+ C ++ F +V +D
Sbjct: 730 IVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGC-SASGFVDVAFDLRDTMLS 788
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
+G+ P++V+YN++I G L A +L ++ KGI + IT+NTL+ +G +
Sbjct: 789 VGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITE 848
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
A K+ + M+ + P V +Y+ ++GL + ++A++L+ +M ++P+ T++ LI+
Sbjct: 849 AFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQ 908
Query: 277 GFV 279
G+V
Sbjct: 909 GYV 911
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/362 (20%), Positives = 166/362 (45%), Gaps = 33/362 (9%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
+++ G +K ++ ++ +K++ G NT + + L +R EE+++ KQ
Sbjct: 494 TLLDGFFKSGKTEKALNLWKETLARG-LAKNTTTFNTVINGLCKIERMPEAEELVDKMKQ 552
Query: 86 YKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
++ + T R L + Y K + A ++ +E+ T+ FN+L+ +K+
Sbjct: 553 WR-CPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHG 611
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
+V+ + ++ ++ G+ P+ V+Y +I + +G L +A L EM +KG+ +L ++L
Sbjct: 612 KVNDILFEMSNR-GLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSL 670
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRS--------------------------YNA 238
+ FY G+F +A + + +V ++ P++ + +N
Sbjct: 671 VSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNI 730
Query: 239 RLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA---KRWYNKSG 295
+ GL + + A L+ +++ K D FT+ +LI G G ++ A + G
Sbjct: 731 VIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVG 790
Query: 296 CGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAK 355
N + L+ +C+ G+L A +L K+ +++ + ++D+ K+ + EA
Sbjct: 791 LTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAF 850
Query: 356 EL 357
+L
Sbjct: 851 KL 852
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 126/270 (46%), Gaps = 16/270 (5%)
Query: 78 EILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGAC 137
++E K++ S F L AL A + A +VFDEM C ++ S N++L
Sbjct: 161 HLVEVYKEFS-FSAASFDLLLRAL-ANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRL 218
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLD 197
+ +F+ + + G PD + + KA+ + A + EM K G+ ++
Sbjct: 219 AQTGDLGATVAVFEQM-QRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVN 277
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
L+ ++ ++ G+ G+ DA ++ +++ PN+ +Y + G EK ++A +V
Sbjct: 278 LVAYHAVMNGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQ 337
Query: 258 EMR-SKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEK 313
E+R +K++ D F A+I G+ G +E+A R N+ S +N ++ +++ C+
Sbjct: 338 EIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKL 397
Query: 314 GDLDFAFNLCKR---------TFSERCLVD 334
G + A N+ T+S LVD
Sbjct: 398 GRMVEAHNILHEMTGVGVRPDTYSYNSLVD 427
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 105/235 (44%), Gaps = 5/235 (2%)
Query: 129 SFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
SF+ LL A N+ + D +F ++ LG + S N+I+ G L + + +
Sbjct: 175 SFDLLLRALANAGQLDGALQVFDEM-RTLGCRLSMRSCNSILNRLAQTGDLGATVAVFEQ 233
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
M++ G D T + + A + E M M V N+ +Y+A ++G Q
Sbjct: 234 MQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQ 293
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA----KRWYNKSGCGMNKAIFK 304
T A ++ + + +P++ T+ L+KG+ NE N+EEA + +++A+F
Sbjct: 294 TNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFG 353
Query: 305 LLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
++ C+ G ++ A L R V+ ++++ K R+ EA ++
Sbjct: 354 AVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILH 408
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 85/185 (45%), Gaps = 7/185 (3%)
Query: 103 GKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPD 162
GK A F D + G N + +N ++ + ++ L DL K G D
Sbjct: 707 GKVANF------IDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDK-GFVAD 759
Query: 163 LVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWE 222
+Y+++I G +D A L M G+ +++T+N+L+ G +G + A +++
Sbjct: 760 NFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFK 819
Query: 223 TMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEG 282
+ + PN +YN +D + +A +L M + I+P VFT+ LI G +G
Sbjct: 820 KLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQG 879
Query: 283 NLEEA 287
+EEA
Sbjct: 880 YMEEA 884
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 134/330 (40%), Gaps = 54/330 (16%)
Query: 25 GSVIRGIYKENNLK---RLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILE 81
G+VI G + ++ RL+++ S R + N +Y + R IL
Sbjct: 353 GAVINGYCQMGRMEDAARLLNEMVDS----RLQVNLFVYNIMINGYCKLGRMVEAHNIL- 407
Query: 82 HQKQYKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNS 140
H+ + + ++ L+ Y K + A + ++ M T L++NALL +
Sbjct: 408 HEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSL 467
Query: 141 KKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGI------ 194
D+ L+ L K GI P+ +S +T++ F G + A L E +G+
Sbjct: 468 GSIDDALRLWF-LMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTT 526
Query: 195 ------------RL-----------------DLITFNTLLLGFYSNGRFADAEKIWETMV 225
R+ D+IT+ TL G+ G A +I +
Sbjct: 527 FNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELE 586
Query: 226 NMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLE 285
N+ P + +N+ + G I KQ K +++ EM ++ ++P+ + ALI G+ EG+L
Sbjct: 587 NLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLH 646
Query: 286 EAKRWYNKSGCGMNKAIFKLLVP--FVCEK 313
A Y + I K LVP F+C
Sbjct: 647 TAYNLY-------LEMIEKGLVPNLFICSS 669
>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 134/284 (47%), Gaps = 10/284 (3%)
Query: 84 KQYKDISKEGFTAR------LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGAC 137
+ Y+++ + G LI+ Y M + A KVF EM + V+++N L+G
Sbjct: 249 QMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGL 308
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLD 197
KKF E L + +K+G+ P++V+YN +I F D +DSA L +++ G+
Sbjct: 309 CRGKKFGEAVKLVHKV-NKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPT 367
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
L+T+NTL+ G+ A A + + M + P+ +Y +D A T+KA E+
Sbjct: 368 LVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHS 427
Query: 258 EMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSG---CGMNKAIFKLLVPFVCEKG 314
M + PDV+T+ L+ G GN++EA + + G N I+ ++ C++G
Sbjct: 428 LMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEG 487
Query: 315 DLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
A L + + A + L ++ + +EA+ L+
Sbjct: 488 SSYRALRLLNEMVQSGMVPNVASFCSTIGLLCRDEKWKEAELLL 531
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 113/274 (41%), Gaps = 11/274 (4%)
Query: 55 TNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKV 114
T T +Y V ++ L H + L+ L ++ F+ A +
Sbjct: 87 TYTPLYDTVVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNYFDKAWWI 146
Query: 115 FDEMPGRNCEQTVL---SFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIK 171
F+E+ + VL SF ++ C + F + L L + G+ P++V Y T+I
Sbjct: 147 FNELKSK----VVLDAYSFGIMIKGCCEAGYFVKGFRLLAML-EEFGLSPNVVIYTTLID 201
Query: 172 AFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRP 231
G++ A L +M + G+ + T++ L+ GF+ G + +++E M + P
Sbjct: 202 GCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVP 261
Query: 232 NVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW- 290
N +YN + + KA ++ EMR K I V T+ LI G EA +
Sbjct: 262 NAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLV 321
Query: 291 --YNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
NK G N + +L+ C+ +D A L
Sbjct: 322 HKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRL 355
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 89/182 (48%), Gaps = 8/182 (4%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACV---NSKKFDEVDGLFKDLP 154
LIA Y K A + EM R + +++ L+ A +++K E+ L +
Sbjct: 374 LIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLME--- 430
Query: 155 HKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRF 214
K G+ PD+ +Y+ ++ G++ A+ L + + ++ + + +NT++ G+ G
Sbjct: 431 -KSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSS 489
Query: 215 ADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYAL 274
A ++ MV + PNV S+ + + L +++ K+A L+G+M + + P V + Y +
Sbjct: 490 YRALRLLNEMVQSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSV-SLYKM 548
Query: 275 IK 276
+
Sbjct: 549 VH 550
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 99/209 (47%), Gaps = 11/209 (5%)
Query: 31 IYKENNLKRLVDKFKKSSDLGRFRTNTGIYTG--TVQRLANAKRFRWIEEILEHQKQYKD 88
+ K ++ RL ++ K S T + G V+ LA A ++ + E +++
Sbjct: 346 VRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGA-----LDLVKEMEERCIA 400
Query: 89 ISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVD 147
SK +T LI + + E A ++ M V +++ LL G CV+ E
Sbjct: 401 PSKVTYTI-LIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGN-MKEAS 458
Query: 148 GLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLG 207
LFK L ++ ++P+ V YNT+I + +GS A LL EM + G+ ++ +F + +
Sbjct: 459 KLFKSLG-EMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCSTIGL 517
Query: 208 FYSNGRFADAEKIWETMVNMNVRPNVRSY 236
+ ++ +AE + M+N ++P+V Y
Sbjct: 518 LCRDEKWKEAELLLGQMINSGLKPSVSLY 546
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 134/269 (49%), Gaps = 5/269 (1%)
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
FTA + L K + A++V + M RNC V+++++L+ + + + +FK +
Sbjct: 220 FTALMDGLC-KGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRM 278
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
+ GIEP++V+YN++I F +DSA L+ EM G D+IT+NTL+ G GR
Sbjct: 279 IVR-GIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGR 337
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
+A +++ M P+V +Y+ + G ++ A L +M + + PDV TF
Sbjct: 338 APEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFST 397
Query: 274 LIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSER 330
L++G+ N G +++A+R + S C + + LV C+ G + A + KR
Sbjct: 398 LVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRG 457
Query: 331 CLVDQAPLQLVVDRLAKELRVEEAKELVE 359
C + ++D + + A +L+E
Sbjct: 458 CQPNVVTYTALIDAFCRAGKPTVAYKLLE 486
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 112/216 (51%), Gaps = 5/216 (2%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A ++F +M + C V++++ L+G ++ D LF D+ K + PD+V+++T++
Sbjct: 341 ANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDM-LKQAVLPDVVTFSTLV 399
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
+ + + G +D A LL EM D+ T+ +L+ GF GR +A ++ + M +
Sbjct: 400 EGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQ 459
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
PNV +Y A +D + A +L+ EM + P+V T+ +LI GF G+LEEA++
Sbjct: 460 PNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKM 519
Query: 291 YNK----SGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
+ C + +++++ +C G + A L
Sbjct: 520 LERLERDENCKADMFAYRVMMDGLCRTGRMSAALEL 555
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 122/263 (46%), Gaps = 4/263 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L++ + + + A ++ DEM R + S++ L+ + K D +F+D +
Sbjct: 118 LLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNG- 176
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
PD+V+Y+T+I G LD A L +M + D++TF L+ G R +A
Sbjct: 177 DCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEA 236
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+++ ETM + N PNV +Y++ +DGL Q + A E+ M + I P+V T+ +LI G
Sbjct: 237 QQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHG 296
Query: 278 FVNEGNLEEA---KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
F ++ A +GC + + L+ +C+ G A L ++ C D
Sbjct: 297 FCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPD 356
Query: 335 QAPLQLVVDRLAKELRVEEAKEL 357
++ K R++ A+ L
Sbjct: 357 VITYSCLIGGFCKLERIDMARTL 379
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 119/273 (43%), Gaps = 4/273 (1%)
Query: 56 NTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVF 115
N +T + L A R K+ + E LI + K A +
Sbjct: 6 NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLL 65
Query: 116 DEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVD 175
EM V++++ ++ K D LF+ + G P+LV+YNT++
Sbjct: 66 KEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVEN-GCMPNLVTYNTLLSGLCR 124
Query: 176 KGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRS 235
G +D A LL EM ++G++ D +++TL+ G G+ A K++E N + P+V +
Sbjct: 125 NGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVA 184
Query: 236 YNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR---WYN 292
Y+ + GL + +A +L +MR PDV TF AL+ G L+EA++
Sbjct: 185 YSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETME 244
Query: 293 KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKR 325
C N + L+ +C+ G + A + KR
Sbjct: 245 DRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKR 277
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 94/191 (49%), Gaps = 2/191 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+ Y A + ++A ++ +EM +C V ++ +L+ + E + K + K
Sbjct: 398 LVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMA-KR 456
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G +P++V+Y +I AF G A LL EM G++ ++IT+ +L+ GF G +A
Sbjct: 457 GCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEA 516
Query: 218 EKIWETMV-NMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
K+ E + + N + ++ +Y +DGL + ALEL+ ++ P + ALI+
Sbjct: 517 RKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIR 576
Query: 277 GFVNEGNLEEA 287
G L +A
Sbjct: 577 GLCQGKELGKA 587
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 102/238 (42%), Gaps = 38/238 (15%)
Query: 160 EPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF----------- 208
E +++++ +I L A T +M+KKG + T+N L+ GF
Sbjct: 4 EKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYL 63
Query: 209 ----------------YS--------NGRFADAEKIWETMVNMNVRPNVRSYNARLDGLA 244
YS + A K++ MV PN+ +YN L GL
Sbjct: 64 LLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLC 123
Query: 245 IEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY--NKSG-CGMNKA 301
+A EL+ EMR + + PD F++ L+ G G ++ A + + N +G C +
Sbjct: 124 RNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVV 183
Query: 302 IFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ L+ +C+ G LD A L ++ C D ++D L K R++EA++++E
Sbjct: 184 AYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLE 241
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 87/195 (44%), Gaps = 9/195 (4%)
Query: 73 FRWIEEILEHQKQYKDISKEG-------FTARLIALYGKAAMFENARKVFDEMPGRNCEQ 125
F + ++E ++ K ++K G +TA LI + +A A K+ +EM G +
Sbjct: 437 FCKVGRMVEARRVLKRMAKRGCQPNVVTYTA-LIDAFCRAGKPTVAYKLLEEMVGNGVQP 495
Query: 126 TVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTL 185
V+++ +L+G + +E + + L + D+ +Y ++ G + +A L
Sbjct: 496 NVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAALEL 555
Query: 186 LYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM-VNMNVRPNVRSYNARLDGLA 244
L +++ G + L+ G A ++ E M ++ RPN +Y A + LA
Sbjct: 556 LEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELA 615
Query: 245 IEKQTKKALELVGEM 259
E + ++A L E+
Sbjct: 616 REGRHEEANALADEL 630
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 29/136 (21%), Positives = 59/136 (43%), Gaps = 3/136 (2%)
Query: 227 MNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEE 286
M NV ++ +DGL + +A +M+ K P+ +T+ LI GF +
Sbjct: 1 MECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHR 60
Query: 287 AK---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVD 343
A + +SG N + ++ C + +D A+ L ++ C+ + ++
Sbjct: 61 AYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLS 120
Query: 344 RLAKELRVEEAKELVE 359
L + ++EA EL++
Sbjct: 121 GLCRNGLMDEAYELLD 136
>gi|15222997|ref|NP_172253.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180186|sp|Q9LQQ1.1|PPR20_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g07740, mitochondrial; Flags: Precursor
gi|8439893|gb|AAF75079.1|AC007583_15 It contains PPR repeats PF|01535 [Arabidopsis thaliana]
gi|14596021|gb|AAK68738.1| Unknown protein [Arabidopsis thaliana]
gi|31376389|gb|AAP49521.1| At1g07730 [Arabidopsis thaliana]
gi|51970836|dbj|BAD44110.1| hypothetical protein [Arabidopsis thaliana]
gi|332190050|gb|AEE28171.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 459
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 157/360 (43%), Gaps = 41/360 (11%)
Query: 44 FKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYG 103
F + ++G FR + Y+ + +LA ++ F +++IL + +E LI YG
Sbjct: 69 FHQYQEMG-FRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQHYG 127
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
KA + A VF ++ +C +T+ S N L+ V++ + ++ F D + + P+
Sbjct: 128 KAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFF-DGAKDMRLRPNS 186
Query: 164 VSYNTIIKAFVDKGSLDSA-----------------------------------NTLLYE 188
VS+N +IK F+DK ++A +LL +
Sbjct: 187 VSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLED 246
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
M KK IR + +TF L+ G G + +A+K+ M +P + +Y + L +
Sbjct: 247 MIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGR 306
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKL 305
+A L+GEM+ + I PDV + L+ E + EA R + GC N A +++
Sbjct: 307 IDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRM 366
Query: 306 LVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE-LGKTN 364
++ C D D N+ + R A +V L K ++ A ++E +GK N
Sbjct: 367 MIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKN 426
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 109/253 (43%), Gaps = 4/253 (1%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
E A +F + S+++L+ S+ FD VD + + + ++ + +
Sbjct: 63 EEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYR-NVRCRESLFMG 121
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
+I+ + GS+D A + +++ + + NTL+ NG A+ ++ +M
Sbjct: 122 LIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMR 181
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
+RPN S+N + G + + A ++ EM E+ P V T+ +LI ++ +AK
Sbjct: 182 LRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAK 241
Query: 289 RWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRL 345
K N F LL+ +C KG+ + A L C +++ L
Sbjct: 242 SLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDL 301
Query: 346 AKELRVEEAKELV 358
K R++EAK L+
Sbjct: 302 GKRGRIDEAKLLL 314
>gi|255560884|ref|XP_002521455.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539354|gb|EEF40945.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 623
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 112/213 (52%), Gaps = 4/213 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+ Y + M + F ++ C +V+S N LL + + D+ ++K++ ++
Sbjct: 185 LVKAYVREGMIKEGFTTFRKIVEVGCVPSVISCNCLLNGLLKLNRIDQCWQVYKEMA-RV 243
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
GI P+ ++N + F G +D N L ME++G D++T+NTL+ + GR DA
Sbjct: 244 GIHPNSYTFNILTHVFCQDGDVDKVNDFLERMEEEGFEPDIVTYNTLISCYCRKGRLDDA 303
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ M NV P++ SY A ++GL E + ++A +L M + +NPD+ +F LI G
Sbjct: 304 FYLYRIMYRRNVLPDLVSYTALMNGLCKEGKVREAHQLFHRMIHRGLNPDIVSFNTLICG 363
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLV 307
+ EG + E++ ++ SG +K ++L+
Sbjct: 364 YCKEGKMRESRSLLHEMIGSGICPDKVTCQVLI 396
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 96/211 (45%), Gaps = 11/211 (5%)
Query: 86 YKDISKEGFTAR------LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
YK++++ G L ++ + + + M E ++++N L+
Sbjct: 237 YKEMARVGIHPNSYTFNILTHVFCQDGDVDKVNDFLERMEEEGFEPDIVTYNTLISCYCR 296
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
+ D+ L++ + ++ + PDLVSY ++ +G + A+ L + M +G+ D++
Sbjct: 297 KGRLDDAFYLYR-IMYRRNVLPDLVSYTALMNGLCKEGKVREAHQLFHRMIHRGLNPDIV 355
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
+FNTL+ G+ G+ ++ + M+ + P+ + ++G E + AL LV E+
Sbjct: 356 SFNTLICGYCKEGKMRESRSLLHEMIGSGICPDKVTCQVLIEGYRKEARIVSALNLVVEL 415
Query: 260 R--SKEINPDVFTFYALIKGFVNEGNLEEAK 288
I+ D++ + L+ EG AK
Sbjct: 416 ERFGVPISTDIYDY--LMVSICEEGRPFAAK 444
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/201 (19%), Positives = 85/201 (42%), Gaps = 3/201 (1%)
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
D V ++ ++KA+V +G + T ++ + G +I+ N LL G R +++
Sbjct: 178 DPVIFDMLVKAYVREGMIKEGFTTFRKIVEVGCVPSVISCNCLLNGLLKLNRIDQCWQVY 237
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
+ M + + PN ++N + K + + M + PD+ T+ LI + +
Sbjct: 238 KEMARVGIHPNSYTFNILTHVFCQDGDVDKVNDFLERMEEEGFEPDIVTYNTLISCYCRK 297
Query: 282 GNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPL 338
G L++A Y + + + L+ +C++G + A L R D
Sbjct: 298 GRLDDAFYLYRIMYRRNVLPDLVSYTALMNGLCKEGKVREAHQLFHRMIHRGLNPDIVSF 357
Query: 339 QLVVDRLAKELRVEEAKELVE 359
++ KE ++ E++ L+
Sbjct: 358 NTLICGYCKEGKMRESRSLLH 378
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 116/305 (38%), Gaps = 40/305 (13%)
Query: 93 GFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKD 152
+TA + L + + E A ++F M R ++SFN L+ K E L +
Sbjct: 321 SYTALMNGLCKEGKVRE-AHQLFHRMIHRGLNPDIVSFNTLICGYCKEGKMRESRSLLHE 379
Query: 153 LPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNG 212
+ GI PD V+ +I+ + + + SA L+ E+E+ G+ + ++ L++ G
Sbjct: 380 MIGS-GICPDKVTCQVLIEGYRKEARIVSALNLVVELERFGVPISTDIYDYLMVSICEEG 438
Query: 213 R-----------------------------------FADAEKIWETMVNMNVRPNVRSYN 237
R ADA + M + N++P+ +Y
Sbjct: 439 RPFAAKSLLQRISQRGYVPGVEIYNKLIESLCKSDSIADALLVKSEMGHRNIKPSAITYK 498
Query: 238 ARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE---GNLEEAKRWYNKS 294
A + L ++ +A L+ EM + PD AL+ + E G E + + K
Sbjct: 499 ALICCLCRTSRSMEAESLMEEMLQSGMLPDPDICRALMHVYCKERDIGKAETLLQTFAKE 558
Query: 295 GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA 354
+ + LV CE D L R + + ++ L K + VE+
Sbjct: 559 FQIFDSESYNTLVKTYCEDADATRLMELQDRMLKVGFAPNIQTFRQMIHGLWKAMAVEKD 618
Query: 355 KELVE 359
K L+E
Sbjct: 619 KLLLE 623
>gi|356552005|ref|XP_003544362.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g09680-like [Glycine max]
Length = 509
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 130/280 (46%), Gaps = 8/280 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+ + K +AR VFDE+P R TV+SFN L+ C + +E L K +
Sbjct: 148 LMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVEEGFRL-KGVMESE 206
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
+ PD+ +++ +I +G LD + L EM KG+ + +TF L+ G G+ A
Sbjct: 207 RVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCKGGKVDLA 266
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
K ++ M+ VRP++ +YNA ++GL K+A LV EM + + PD TF LI G
Sbjct: 267 LKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRITFTTLIDG 326
Query: 278 FVNEGNLEEA---KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
G++E A KR + G ++ F +L+ +C G + A + + S D
Sbjct: 327 CCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAGFKPD 386
Query: 335 QAPLQLVVDRLAKELRVEEA----KELVELGKTNSYCRYN 370
+VVD K+ V KE+ G YN
Sbjct: 387 DPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYN 426
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 110/239 (46%), Gaps = 38/239 (15%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G P+ +N ++ F G + SA + E+ K+G+R +++FNTL+ G G +
Sbjct: 137 GYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVEEG 196
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLA------------------------------IEK 247
++ M + V P+V +++A ++GL I+
Sbjct: 197 FRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDG 256
Query: 248 QTKK-----ALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMN 299
Q K AL+ M ++ + PD+ T+ ALI G G+L+EA+R N+ SG +
Sbjct: 257 QCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPD 316
Query: 300 KAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
+ F L+ C+ GD++ A + +R E +D +++ L ++ RV +A+ ++
Sbjct: 317 RITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERML 375
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 87/185 (47%), Gaps = 1/185 (0%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K + A K F M + ++++NAL+ E L ++ G+ PD
Sbjct: 259 KGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSAS-GLRPDR 317
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
+++ T+I G ++SA + M ++GI LD + F L+ G +GR DAE++
Sbjct: 318 ITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRD 377
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M++ +P+ +Y +D + +L+ EM+S P V T+ AL+ G +G
Sbjct: 378 MLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQ 437
Query: 284 LEEAK 288
++ AK
Sbjct: 438 VKNAK 442
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 80/175 (45%), Gaps = 5/175 (2%)
Query: 188 EMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEK 247
E+ G + FN L+ GF G A +++ + +RP V S+N + G
Sbjct: 132 EVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAG 191
Query: 248 QTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGM----NKAIF 303
++ L G M S+ + PDVFTF ALI G EG L+E +++ CG N F
Sbjct: 192 AVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEM-CGKGLVPNGVTF 250
Query: 304 KLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
+L+ C+ G +D A + ++ D +++ L K ++EA+ LV
Sbjct: 251 TVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLV 305
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 125/323 (38%), Gaps = 83/323 (25%)
Query: 59 IYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFT-ARLIALYGKAAMFENARKVFDE 117
+ +G + A + FR ++ ++E ++ D+ FT + LI K + +FDE
Sbjct: 183 LISGCCKAGAVEEGFR-LKGVMESERVCPDV----FTFSALINGLCKEGRLDEGSLLFDE 237
Query: 118 MPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKL--GIEPDLVSYNTIIKAFV 174
M G+ ++F L+ G C K VD K+ L G+ PDLV+YN +I
Sbjct: 238 MCGKGLVPNGVTFTVLIDGQCKGGK----VDLALKNFQMMLAQGVRPDLVTYNALINGLC 293
Query: 175 DKGSLDSANTLLYEMEKKGIRLDLITFNTLL----------------------------- 205
G L A L+ EM G+R D ITF TL+
Sbjct: 294 KVGDLKEARRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDV 353
Query: 206 ------LGFYSNGRFADAEKIWETMVNMNVRPN--------------------------- 232
G +GR DAE++ M++ +P+
Sbjct: 354 AFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEM 413
Query: 233 --------VRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
V +YNA ++GL + Q K A L+ M + + P+ T+ L++G G+
Sbjct: 414 QSDGHVPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLEGHSKHGSS 473
Query: 285 EEAKRWYNKSGCGMNKAIFKLLV 307
+ + ++ G + A + LV
Sbjct: 474 VDVDIFNSEKGLVKDYASYTALV 496
>gi|242067098|ref|XP_002454838.1| hypothetical protein SORBIDRAFT_04g038280 [Sorghum bicolor]
gi|241934669|gb|EES07814.1| hypothetical protein SORBIDRAFT_04g038280 [Sorghum bicolor]
Length = 419
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 160/325 (49%), Gaps = 28/325 (8%)
Query: 53 FRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY--KDISKEGFTARLIALYGKAAMFEN 110
F + ++ +V RLA+A R + +L EGF RLI+LY A M ++
Sbjct: 73 FLADRPLFALSVHRLASAGRRDLVASVLSSSLTALPSPHPSEGFLLRLISLYSAAGMPDH 132
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
+ VF + + + +ALL +++ +D F LP +LGI+P LVS+N ++
Sbjct: 133 SLTVFRLV----NPPSDRALSALLSTYHDNRLYDRAVRAFNTLPAELGIKPGLVSHNVLL 188
Query: 171 KAFVDKGSLDSANTLLYEM-EKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN- 228
KA V G + +A + +M + G++ D+++ N +L G+ S G A +++ + + N
Sbjct: 189 KALVASGDIAAARSAFDKMPDTAGVQPDIVSCNEILKGYLSTGDDAAFDQLVKEIAGPNR 248
Query: 229 -VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
++PNV +YN R+ L ++++ +A EL+ M + + P+ +F +IKG NEG + A
Sbjct: 249 RLKPNVGTYNLRMAMLCSKERSFEAEELLDAMGANGVPPNRASFNTVIKGLCNEGEVGAA 308
Query: 288 KRWYNK---------SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQ--A 336
+ + G N + +L+ + K D A +CK CL ++
Sbjct: 309 MALFKRMPEVPRQKGKGVSPNFETYIMLLEALVNKNLFDPALEVCK-----ECLHNKWAP 363
Query: 337 PLQLV---VDRLAKELRVEEAKELV 358
P Q V V+ L K + + A+E++
Sbjct: 364 PFQAVKGLVESLLKSRKAKHAREVL 388
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 127/289 (43%), Gaps = 43/289 (14%)
Query: 115 FDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFV 174
F EM C V+++N L+ A + DE GL K + K G++P+L+SYN II
Sbjct: 237 FGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSK-GMQPNLISYNVIINGLC 295
Query: 175 DKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVR 234
+GS+ A +L EM KG D +T+NTLL G+ G F A I MV V P+V
Sbjct: 296 REGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVV 355
Query: 235 SYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN-- 292
+Y A ++ + + +A+E +MR + + P+ T+ LI GF +G L EA R N
Sbjct: 356 TYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEM 415
Query: 293 ------------------------------------KSGCGMNKAIFKLLVPFVCEKGDL 316
+ G + + ++ C KG+L
Sbjct: 416 TESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGEL 475
Query: 317 DFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA----KELVELG 361
D AF + + + D ++ L + R+ EA +E++++G
Sbjct: 476 DRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMG 524
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 154/369 (41%), Gaps = 66/369 (17%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMP 119
YT + + A+ E + + E LI + + + A ++ +EM
Sbjct: 357 YTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMT 416
Query: 120 GRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGS 178
+V+++NA + G CV ++ +E G+ +++ K G+ PD+VSY+TII F KG
Sbjct: 417 ESGFSPSVVTYNAFIHGHCV-LERMEEALGVVQEMVEK-GLAPDVVSYSTIISGFCRKGE 474
Query: 179 LDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNA 238
LD A + EM +KG+ D +T+++L+ G R +A + + M++M + P+ +Y
Sbjct: 475 LDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTT 534
Query: 239 RLDGLAIEKQTKKALELVGEMRSKEINPDVFTF--------------------------- 271
++ +E KAL L EM K PD T+
Sbjct: 535 LINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEE 594
Query: 272 -----------------------YALIKGFVNEGNLEEAKRWY-------NKSGCGMNKA 301
ALIKGF +G + EA R + +K G +A
Sbjct: 595 SVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPG----EA 650
Query: 302 IFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELG 361
++ +++ C G+L AFNL K + + ++ L KE EE E++ G
Sbjct: 651 VYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVI--G 708
Query: 362 KTNSYCRYN 370
T CR N
Sbjct: 709 DTLRSCRLN 717
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 130/262 (49%), Gaps = 16/262 (6%)
Query: 118 MPGRNCEQTVLSFNALLGACVNSKKFDEVDG--LFKDLPHKLGIEPDLVSYNTIIKAFVD 175
MPG VLS+N++L A V S+ ++ +++++ + + P++ +YN +I+ F
Sbjct: 174 MPG------VLSYNSVLDAIVRSRGSVKLSAEEVYREMI-RSRVSPNVYTYNILIRGFCS 226
Query: 176 KGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRS 235
G L EME+ G +++T+NTL+ + GR +A + ++M + ++PN+ S
Sbjct: 227 VGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLIS 286
Query: 236 YNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN--- 292
YN ++GL E K+A E++ EM K PD T+ L+ G+ EGN +A +
Sbjct: 287 YNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMV 346
Query: 293 KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVE 352
++G + + L+ +C+ +L+ A + ++ ++D +++ +
Sbjct: 347 RNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLN 406
Query: 353 EA----KELVELGKTNSYCRYN 370
EA E+ E G + S YN
Sbjct: 407 EAYRILNEMTESGFSPSVVTYN 428
>gi|226501132|ref|NP_001144243.1| hypothetical protein [Zea mays]
gi|195638968|gb|ACG38952.1| hypothetical protein [Zea mays]
gi|413939592|gb|AFW74143.1| hypothetical protein ZEAMMB73_602318 [Zea mays]
Length = 419
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 163/326 (50%), Gaps = 32/326 (9%)
Query: 53 FRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY--KDISKEGFTARLIALYGKAAMFEN 110
F + ++ +V RLA+A R + +L EGF RLI+LY A M ++
Sbjct: 73 FLADRPLFALSVHRLASAGRRDLVASVLSSSLTALPSPHPSEGFLLRLISLYSAAGMPDH 132
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
+ VF + + LS ALL A +++ +D F LP +LGI+P LVS+N ++
Sbjct: 133 SLAVFRLV--KPASDRALS--ALLSAYHDNRLYDRTVRAFNTLPAELGIKPGLVSHNVLL 188
Query: 171 KAFVDKGSLDSANTLLYEM-EKKGIRLDLITFNTLLLGFYSNGRFADA-EKIWETMVNMN 228
KA V G + +A+TL EM + G++ D+++ N +L G+ + G ADA +++ + +
Sbjct: 189 KALVASGDVAAAHTLFDEMPDTAGVQPDIVSCNEILKGYLNAGD-ADAFDRLVKEIAGPK 247
Query: 229 --VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEG---- 282
++PNV +YN R+ L + ++ +A EL+ M + + P+ +F +IKG NEG
Sbjct: 248 RRLKPNVGTYNLRMALLCSKMRSFEAEELLDVMGANGVPPNRTSFNTVIKGLCNEGEVGA 307
Query: 283 ------NLEEAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQ- 335
+ E R + K G N + +L+ + +K D A +CK CL ++
Sbjct: 308 AMALFKRMPEVPRQHGK-GVSPNFETYIMLLEALVKKNLFDPALEICK-----ECLRNKW 361
Query: 336 -APLQLV---VDRLAKELRVEEAKEL 357
P Q V V L K + + A+E+
Sbjct: 362 APPFQAVKGLVQGLLKSRKAKHAREV 387
>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 557
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 128/257 (49%), Gaps = 4/257 (1%)
Query: 105 AAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLV 164
A +E+A K+ EM + V++FN L+ + + +P K G P+ +
Sbjct: 274 AERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIP-KYGCTPNSL 332
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
SYN I+ AF + +D A + M +G D++++NTLL G A ++ +
Sbjct: 333 SYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQL 392
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
+ P + SYN +DGL +TK+ALEL+ EM +K + PD+ T+ + G E +
Sbjct: 393 KDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRI 452
Query: 285 EEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLV 341
EEA R + K G N ++ ++ +C++ + A +L S C+ +++ ++
Sbjct: 453 EEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTIL 512
Query: 342 VDRLAKELRVEEAKELV 358
++ L E V+EA+EL+
Sbjct: 513 IEGLTYEGLVKEARELL 529
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 141/328 (42%), Gaps = 56/328 (17%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
V+ GI +E + ++ F KS NT Y ++ L A+R+ E+++
Sbjct: 232 VVNGICQEGRVDDAIE-FLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLM------ 284
Query: 87 KDISKEGFTAR------LIALYGKAAMFENARKVFDEMP--------------------- 119
++S++G+ LI+ + + E A +V D++P
Sbjct: 285 AEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQ 344
Query: 120 --------------GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVS 165
R C ++S+N LL A + D L L K G P L+S
Sbjct: 345 KKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDK-GCTPVLIS 403
Query: 166 YNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMV 225
YNT+I G A LL EM KG++ D+IT++T+ G R +A + + +
Sbjct: 404 YNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQ 463
Query: 226 NMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLE 285
+M +RPN YNA L GL ++T A++L M S P+ T+ LI+G EG ++
Sbjct: 464 DMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVK 523
Query: 286 EAKRWYNK-------SGCGMNKAIFKLL 306
EA+ + S +NKA +LL
Sbjct: 524 EARELLGELCSRGVVSKGLINKAAIRLL 551
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 128/285 (44%), Gaps = 12/285 (4%)
Query: 79 ILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACV 138
++E + + G A LI + AR+V CE V+++NA++
Sbjct: 81 LVESMSGLEPSAAPGPCAALIKKLCASGRTAEARRVLAA-----CEPDVMAYNAMVAGYC 135
Query: 139 NSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL 198
+ + D L D+P +EPD +YNT+I+ +G +A +L +M ++G D+
Sbjct: 136 VTGQLDAARRLVADMP----MEPDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDV 191
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
+T+ LL + A K+ + M P++ +YN ++G+ E + A+E +
Sbjct: 192 VTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKS 251
Query: 259 MRSKEINPDVFTFYALIKGFVNEGNLEEAKRW---YNKSGCGMNKAIFKLLVPFVCEKGD 315
+ S P+ ++ ++KG E+A++ ++ G N F +L+ F+C +G
Sbjct: 252 LPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGL 311
Query: 316 LDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVEL 360
++ A + + C + ++ K+ +++ A VEL
Sbjct: 312 VEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVEL 356
>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 575
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 128/254 (50%), Gaps = 4/254 (1%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
++A KVFDEM R ++++N L+G K +E + + + + I P+L++YNT
Sbjct: 285 KDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYV-INPNLITYNT 343
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
+I F G L A +L +++ +G+ L+T+N L+ GF G + A K+ + M
Sbjct: 344 LIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERG 403
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
++P+ +Y +D A + A++L M + PDV T+ LI GF +G + EA
Sbjct: 404 IKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEAS 463
Query: 289 RWYNKSGCGM---NKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRL 345
R + M N+ I+ ++ C++G A L + + + A ++ L
Sbjct: 464 RLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVL 523
Query: 346 AKELRVEEAKELVE 359
KE +++EA++LVE
Sbjct: 524 CKERKLKEAEDLVE 537
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 98/201 (48%), Gaps = 4/201 (1%)
Query: 127 VLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLL 186
V SF ++ C + + ++ L +L + G P++V Y T+I KG ++ A L
Sbjct: 163 VYSFGIVIKGCCEAGEIEKSFDLLVEL-REFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221
Query: 187 YEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIE 246
+EM K G+ + T+ L+ G + NG +++E M V PN+ +YN ++ L +
Sbjct: 222 FEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKD 281
Query: 247 KQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGM---NKAIF 303
+TK A ++ EMR + ++ ++ T+ LI G E EA + ++ + N +
Sbjct: 282 GRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITY 341
Query: 304 KLLVPFVCEKGDLDFAFNLCK 324
L+ C G L A +LC+
Sbjct: 342 NTLIDGFCSVGKLGKALSLCR 362
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 89/186 (47%), Gaps = 7/186 (3%)
Query: 87 KDISKEGFTARLIALYGKAAMF------ENARKVFDEMPGRNCEQTVLSFNALLGACVNS 140
+D+ G + L+ + F A K+ EM R + + +++ L+ S
Sbjct: 362 RDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARS 421
Query: 141 KKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLIT 200
+ L + +LG+ PD+ +Y+ +I F KG ++ A+ L M +K + + +
Sbjct: 422 DNMETAIQLRSSM-EELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVI 480
Query: 201 FNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMR 260
+NT++LG+ G A +++ M + PNV SY+ + L E++ K+A +LV +M
Sbjct: 481 YNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKMI 540
Query: 261 SKEINP 266
I+P
Sbjct: 541 DSGIDP 546
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 92/215 (42%), Gaps = 14/215 (6%)
Query: 166 YNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMV 225
Y II A+V SLDS+ EM KG FN LL + F W
Sbjct: 97 YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQ----WWCFF 152
Query: 226 N---MNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEG 282
N + V +V S+ + G + +K+ +L+ E+R +P+V + LI G +G
Sbjct: 153 NESKIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKG 212
Query: 283 NLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQ 339
+E+AK + K G N+ + +L+ + + G F + ++ +
Sbjct: 213 EIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYN 272
Query: 340 LVVDRLAKELRVEEA----KELVELGKTNSYCRYN 370
V+++L K+ R ++A E+ E G + + YN
Sbjct: 273 CVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYN 307
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 69/136 (50%), Gaps = 3/136 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHK 156
LI + ++ E A ++ M V +++ L+ G C+ + +E LFK + K
Sbjct: 414 LIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQ-MNEASRLFKSMVEK 472
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
+ +EP+ V YNT+I + +GS A L +ME+K + ++ +++ L+ + +
Sbjct: 473 M-LEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKE 531
Query: 217 AEKIWETMVNMNVRPN 232
AE + E M++ + P+
Sbjct: 532 AEDLVEKMIDSGIDPS 547
>gi|357475985|ref|XP_003608278.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359684|gb|ABD32353.2| Tetratricopeptide-like helical [Medicago truncatula]
gi|355509333|gb|AES90475.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 870
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 137/267 (51%), Gaps = 6/267 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPH-- 155
L++ + K M + A K+ + M + V++FN+ + A + K E +F+D+
Sbjct: 225 LVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFNSRISALCRAGKVFEASRIFRDMQMDG 284
Query: 156 KLGI-EPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRF 214
+LG+ +P++V++N ++K F +G ++ A +L+ M+K G + L ++NT LLG NG+
Sbjct: 285 ELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVETMKKGGNFVSLESYNTWLLGLLRNGKL 344
Query: 215 ADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYAL 274
+ + + MV + PN+ SYN +DGL A L+ M S + PD T+ L
Sbjct: 345 LEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTL 404
Query: 275 IKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERC 331
+ G+ ++G + EAK N + GC N L+ + ++G A + ++ +
Sbjct: 405 LHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSY 464
Query: 332 LVDQAPLQLVVDRLAKELRVEEAKELV 358
+D +VV+ L + +E+A E+V
Sbjct: 465 QLDTVTCNIVVNGLCRNGELEKASEVV 491
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 122/244 (50%), Gaps = 4/244 (1%)
Query: 127 VLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLL 186
V+++ L+ K +E F ++ K + PD V+Y+T + F +G + SA +L
Sbjct: 525 VITYTTLINGLCKVGKLEEAKKKFIEMMAK-NLHPDSVTYDTFVLNFCKQGKISSALRVL 583
Query: 187 YEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIE 246
+ME+ G L T+N+L+LG S G+ + + + M + P++ +YN ++ L
Sbjct: 584 KDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNNMINCLCEG 643
Query: 247 KQTKKALELVGEMRSKEI-NPDVFTFYALIKGFVNEGNLEEAKRWYNK--SGCGMNKAIF 303
+TK A L+ EM K + +P+V +F LIK F G+ + A ++ S CG +A++
Sbjct: 644 GKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKSGDFKVACELFDVALSVCGHKEALY 703
Query: 304 KLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKT 363
L+ + G L A L + + L + ++D+L K+ R+++A L++
Sbjct: 704 SLMFNELLAGGKLSDAKELFEASLERSLLSKNFMYEDLIDKLCKDGRLDDAHGLLQKLID 763
Query: 364 NSYC 367
YC
Sbjct: 764 KGYC 767
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 102/226 (45%), Gaps = 26/226 (11%)
Query: 89 ISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVD 147
+S E + L+ L + E R V DEM E + S+N ++ G C N D
Sbjct: 326 VSLESYNTWLLGLLRNGKLLE-GRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARR 384
Query: 148 GLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLG 207
DL G+ PD V+Y T++ + KG + A +L EM +KG + T NTLL
Sbjct: 385 --LMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNS 442
Query: 208 FYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEIN-- 265
+ GR ++AE++ + M + + + + N ++GL + +KA E+V EM + N
Sbjct: 443 LWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSL 502
Query: 266 --------------------PDVFTFYALIKGFVNEGNLEEAKRWY 291
PDV T+ LI G G LEEAK+ +
Sbjct: 503 GKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKF 548
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 103/222 (46%), Gaps = 5/222 (2%)
Query: 142 KFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITF 201
K + V GL + + PD+++Y T+I G L+ A EM K + D +T+
Sbjct: 504 KENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTY 563
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS 261
+T +L F G+ + A ++ + M +++YN+ + GL + Q + L+ EMR
Sbjct: 564 DTFVLNFCKQGKISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRE 623
Query: 262 KEINPDVFTFYALIKGFVNEGNLEEA----KRWYNKSGCGMNKAIFKLLVPFVCEKGDLD 317
+ I+PD+ T+ +I G ++A +K N + FK+L+ C+ GD
Sbjct: 624 RGIHPDICTYNNMINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKSGDFK 683
Query: 318 FAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
A L S C +A L+ + L ++ +AKEL E
Sbjct: 684 VACELFDVALS-VCGHKEALYSLMFNELLAGGKLSDAKELFE 724
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 131/316 (41%), Gaps = 55/316 (17%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACV---NSKKFDEVDGLFKDL 153
LI ++ ++AR++FD+M + C+ + L+ G C + + VDG
Sbjct: 157 LIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFCRAGRTKQALEFVDG----- 211
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
K+G + V YNT++ +F + D A L+ M +KG+ D++TFN+ + G+
Sbjct: 212 --KMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFNSRISALCRAGK 269
Query: 214 FADAEKIWETMVNMN-----VRPNVRSYNARLDGLAIEKQTKKALELV------------ 256
+A +I+ M M+ +PNV ++N L G E ++A LV
Sbjct: 270 VFEASRIFRDM-QMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVETMKKGGNFVSL 328
Query: 257 -----------------------GEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN- 292
EM I P+++++ ++ G + +A+R +
Sbjct: 329 ESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDL 388
Query: 293 --KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELR 350
+G + + L+ C KG + A + + C + +++ L KE R
Sbjct: 389 MVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGR 448
Query: 351 VEEAKELVELGKTNSY 366
EA+E+++ SY
Sbjct: 449 KSEAEEMLQKMNEKSY 464
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 85/184 (46%), Gaps = 10/184 (5%)
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
V L+ D+ + G+ P+ ++N +I++ + +LD A L +M +KG + + T L+
Sbjct: 135 VTSLYTDMI-QTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILV 193
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEIN 265
GF GR A + + + NV N YN + + +A +LV M K +
Sbjct: 194 RGFCRAGRTKQALEFVDGKMGGNV--NRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLL 251
Query: 266 PDVFTFYALIKGFVNEGNLEEAKRWYN----KSGCGM---NKAIFKLLVPFVCEKGDLDF 318
PDV TF + I G + EA R + G+ N F L++ C++G ++
Sbjct: 252 PDVVTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEE 311
Query: 319 AFNL 322
A +L
Sbjct: 312 ARSL 315
>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
Length = 1048
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 145/304 (47%), Gaps = 7/304 (2%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
+VI G+ K +L ++ F G R + Y + L+N+ R+ +L +
Sbjct: 714 TVINGLCKNRDLNNALEVFYCMEKKG-IRADAVTYNTLISGLSNSGRWTDAARLLRDMVK 772
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFD 144
K F LI + K AR ++ EM R+ V ++N+L+ G C++
Sbjct: 773 RKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGC-LG 831
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
+ +F DL G PD+V+YNT+I F ++ L EM +G+ D T+NTL
Sbjct: 832 DAKYMF-DLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTL 890
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+ G+ G+ A+K++ MV+ V P++ +YN LD L + +KAL +V +++ E+
Sbjct: 891 IHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEM 950
Query: 265 NPDVFTFYALIKGFVNEGNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFN 321
+ D+ T+ +I+G L+EA R + G + + ++ +C KG A
Sbjct: 951 DVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADK 1010
Query: 322 LCKR 325
LC+R
Sbjct: 1011 LCRR 1014
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 138/275 (50%), Gaps = 8/275 (2%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFT-ARLIALYGKAAMFENARKVFDEM 118
+T + AN +R+ + + + Y IS + ++ LI + + + A V +M
Sbjct: 74 FTRLLTATANLRRYETVIYFSQKMELY-GISHDLYSFTILIHCFCRCSRLSFALSVLGKM 132
Query: 119 PGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKG 177
E ++++F +LL G C+ ++ D + L K G EP++V YNT+I G
Sbjct: 133 MKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVI--LMVKSGYEPNVVVYNTLIDGLCKNG 190
Query: 178 SLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYN 237
L+ A LL EMEKKG+ D++T+NTLL G +GR++DA ++ M+ ++ P+V ++
Sbjct: 191 ELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFT 250
Query: 238 ARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KS 294
A +D + +A EL EM ++P+ T+ ++I G G L +AK+ ++
Sbjct: 251 ALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASK 310
Query: 295 GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSE 329
GC N + L+ C+ +D L +R E
Sbjct: 311 GCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCE 345
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 104/206 (50%), Gaps = 5/206 (2%)
Query: 126 TVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTL 185
++++ +LL +F E L + G P++V YNT+I L++A +
Sbjct: 673 SIVTLGSLLNGFCQGNRFQEAVSLVDSMD-GFGFVPNVVIYNTVINGLCKNRDLNNALEV 731
Query: 186 LYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAI 245
Y MEKKGIR D +T+NTL+ G ++GR+ DA ++ MV + PNV + A +D
Sbjct: 732 FYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVK 791
Query: 246 EKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAI 302
E +A L EM + + P+VFT+ +LI GF G L +AK ++ GC +
Sbjct: 792 EGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVT 851
Query: 303 FKLLVPFVCEKGDLDFAFNL-CKRTF 327
+ L+ C+ ++ L C+ T+
Sbjct: 852 YNTLITGFCKSKRVEDGMKLFCEMTY 877
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 118/250 (47%), Gaps = 4/250 (1%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A ++ +EM + V+++N LL S ++ + + +D+ K I PD+V++ +I
Sbjct: 195 ALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDM-MKRSINPDVVTFTALI 253
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
FV +G+LD A L EM + + + +T+N+++ G +GR DA+K ++ M +
Sbjct: 254 DVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCF 313
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR- 289
PNV +YN + G + + ++L M + N D+FT+ LI G+ G L A
Sbjct: 314 PNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDI 373
Query: 290 --WYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAK 347
W + +L+ +C G+++ A + +++ L K
Sbjct: 374 FCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCK 433
Query: 348 ELRVEEAKEL 357
+VE+A EL
Sbjct: 434 ADKVEKAWEL 443
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 112/256 (43%), Gaps = 4/256 (1%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
FE+A +F EM +++ F LL A N ++++ V F GI DL S+
Sbjct: 52 FEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVI-YFSQKMELYGISHDLYSFT 110
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
+I F L A ++L +M K G ++TF +LL GF R DA + MV
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS 170
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
PNV YN +DGL + ALEL+ EM K + DV T+ L+ G G +A
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDA 230
Query: 288 KRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDR 344
R K + F L+ ++G+LD A L K + +++
Sbjct: 231 ARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIING 290
Query: 345 LAKELRVEEAKELVEL 360
L R+ +AK+ +L
Sbjct: 291 LCMHGRLYDAKKTFDL 306
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 80/178 (44%), Gaps = 1/178 (0%)
Query: 110 NARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTI 169
+A+K FD M + C V+++N L+ + DE LF+ + + G D+ +YNT+
Sbjct: 299 DAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCE-GFNADIFTYNTL 357
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
I + G L A + M + + D+IT LL G NG A ++ M
Sbjct: 358 IHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEK 417
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+ +YN + GL + +KA EL + + + PD T+ +I G G EA
Sbjct: 418 YIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREA 475
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 114/302 (37%), Gaps = 88/302 (29%)
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLY---EMEKKGI 194
++S +F++ LF ++ H + P +V + ++ A +L T++Y +ME GI
Sbjct: 47 LHSIRFEDAFALFFEMVHSQPL-PSIVDFTRLLTA---TANLRRYETVIYFSQKMELYGI 102
Query: 195 RLDL-----------------------------------ITFNTLLLGFYSNGRFADAEK 219
DL +TF +LL GF R DA
Sbjct: 103 SHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFS 162
Query: 220 IWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK----------------- 262
+ MV PNV YN +DGL + ALEL+ EM K
Sbjct: 163 LVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLC 222
Query: 263 ------------------EINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKA 301
INPDV TF ALI FV +GNL+EA+ Y +S N
Sbjct: 223 YSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNV 282
Query: 302 IFKLLVPFVCEKGDLDFAFNLCKRTF----SERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
+ ++ +C G L A K+TF S+ C + ++ K V+E +L
Sbjct: 283 TYNSIINGLCMHGRLYDA----KKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKL 338
Query: 358 VE 359
+
Sbjct: 339 FQ 340
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 101/289 (34%), Gaps = 74/289 (25%)
Query: 142 KFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL--- 198
KFD+ LF ++ I P +V + ++ D L ++ME GI DL
Sbjct: 584 KFDDAFSLFCEMLQSRPI-PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSF 642
Query: 199 --------------------------------ITFNTLLLGFYSNGRFADAEKIWETMVN 226
+T +LL GF RF +A + ++M
Sbjct: 643 TILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDG 702
Query: 227 MNVRPNVRSYNARLDGLAIEKQTKKALE-------------------------------- 254
PNV YN ++GL + ALE
Sbjct: 703 FGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTD 762
Query: 255 ---LVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVP 308
L+ +M ++I+P+V F ALI FV EGNL EA+ Y + N + L+
Sbjct: 763 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN 822
Query: 309 FVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
C G L A + S+ C D ++ K RVE+ +L
Sbjct: 823 GFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKL 871
>gi|42573413|ref|NP_974803.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122214363|sp|Q3E9F0.1|PP392_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g18475
gi|110737103|dbj|BAF00503.1| hypothetical protein [Arabidopsis thaliana]
gi|332005185|gb|AED92568.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 506
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 180/353 (50%), Gaps = 14/353 (3%)
Query: 19 TGPK--FIG--SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFR 74
T PK FI S + + +E + + ++D F K+S F N Y+ + L K+F
Sbjct: 47 TNPKTKFISHESAVSLMKRERDPQGVLDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFL 106
Query: 75 WIEEILEHQKQYKDIS-KEGFTARLIALYGKAAMFENARKVFD--EMPGRNCEQTVLSFN 131
++ IL HQ +Y+ +E L+ + ++ + + ++F+ ++ R + ++ + +
Sbjct: 107 AVDAIL-HQMKYETCRFQESLFLNLMRHFSRSDLHDKVMEMFNLIQVIAR-VKPSLNAIS 164
Query: 132 ALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEK 191
L ++S + + L H LG++P+ +N ++K G ++ A ++ EM++
Sbjct: 165 TCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKR 224
Query: 192 KGIRL-DLITFNTLLLGFYSNGRFADAEKIWETMVNM-NVRPNVRSYNARLDGLAIEKQT 249
GI + IT++TL+ +++ R +A +++E M++ + P+ ++N ++G +
Sbjct: 225 SGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEV 284
Query: 250 KKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLL 306
++A +++ M+ NP+V+ + AL+ GF G ++EAK+ ++ K+G ++ + L
Sbjct: 285 ERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTL 344
Query: 307 VPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ C G+ D A L + RC D +++ L+ E R EEA ++++
Sbjct: 345 MNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLD 397
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 102/195 (52%), Gaps = 3/195 (1%)
Query: 128 LSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLY 187
++++ L+ + E LF+D+ K GI PD V++N +I F G ++ A +L
Sbjct: 233 ITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILD 292
Query: 188 EMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEK 247
M+K G ++ ++ L+ GF G+ +A++ ++ + ++ + Y ++
Sbjct: 293 FMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNG 352
Query: 248 QTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW---YNKSGCGMNKAIFK 304
+T +A++L+GEM++ D T+ +++G +EG EEA + + G +NK ++
Sbjct: 353 ETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYR 412
Query: 305 LLVPFVCEKGDLDFA 319
+++ +C G+L+ A
Sbjct: 413 IILNALCCNGELEKA 427
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 95/190 (50%), Gaps = 4/190 (2%)
Query: 128 LSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLY 187
++FN ++ + + + + D K G P++ +Y+ ++ F G + A
Sbjct: 269 VTFNVMINGFCRAGEVERAKKIL-DFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFD 327
Query: 188 EMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEK 247
E++K G++LD + + TL+ F NG +A K+ M R + +YN L GL+ E
Sbjct: 328 EVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEG 387
Query: 248 QTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW---YNKSGCGMNKAIFK 304
++++AL+++ + S+ ++ + ++ ++ G LE+A ++ ++ G + A +
Sbjct: 388 RSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWN 447
Query: 305 LLVPFVCEKG 314
LV +CE G
Sbjct: 448 ELVVRLCESG 457
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 37/192 (19%), Positives = 81/192 (42%), Gaps = 7/192 (3%)
Query: 76 IEEILEHQKQYKDISKEGFT------ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLS 129
+ +I E ++ + ++ K G L+ + + + A K+ EM C L+
Sbjct: 316 VGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLT 375
Query: 130 FNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEM 189
+N +L + + +E + + G+ + SY I+ A G L+ A L M
Sbjct: 376 YNVILRGLSSEGRSEEALQMLDQWGSE-GVHLNKGSYRIILNALCCNGELEKAVKFLSVM 434
Query: 190 EKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQT 249
++GI T+N L++ +G ++ + + + P +S+ A ++ + E++
Sbjct: 435 SERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKL 494
Query: 250 KKALELVGEMRS 261
EL+ + S
Sbjct: 495 VHVFELLDSLVS 506
>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
Length = 602
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 143/303 (47%), Gaps = 7/303 (2%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMP 119
Y ++ L +A+R+ +E++ + E +I + + + A ++ ++M
Sbjct: 275 YNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMS 334
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL 179
C ++++NA++ + D GL + G +PD+V+YNT++K
Sbjct: 335 KHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKM-KSYGCKPDIVTYNTLLKGLCSAAQW 393
Query: 180 DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNAR 239
A L+ M + G D +TFNTL+ G DA ++++ M + PN +Y+
Sbjct: 394 VDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTI 453
Query: 240 LDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN-LEEAKRWYNK---SG 295
+ GLA + +ALEL EM K NPD Y L+ +N+ + +EEA + K SG
Sbjct: 454 ISGLAKATKLDQALELFNEMGHKGFNPD--KIYQLLAECLNDDDTIEEAIQTVRKLQDSG 511
Query: 296 CGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAK 355
+ ++ ++ +C G +FA ++ S C+ D ++++ LA E + EA+
Sbjct: 512 ISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEAR 571
Query: 356 ELV 358
EL+
Sbjct: 572 ELL 574
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 131/298 (43%), Gaps = 39/298 (13%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + +A V D+M R C V+++N LL A + + + L DL
Sbjct: 173 LIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELI-DLMRAE 231
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G P+ V+YN ++ +G +D A LL + G + + +NT+L G S R+ DA
Sbjct: 232 GCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDA 291
Query: 218 EKIWETMVNMNVRP-----------------------------------NVRSYNARLDG 242
+++ M+ N P N+ +YNA ++G
Sbjct: 292 DELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIING 351
Query: 243 LAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMN 299
L ++ A+ L+ +M+S PD+ T+ L+KG + +A+ + ++GC +
Sbjct: 352 LCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPD 411
Query: 300 KAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
F L+ F+C+KG + A + K+ + C + ++ LAK ++++A EL
Sbjct: 412 NVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALEL 469
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 122/275 (44%), Gaps = 7/275 (2%)
Query: 102 YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEP 161
Y +A +AR+V MP + ++N L+ + + + D+ + G P
Sbjct: 145 YCRAGRLGDARRVVGGMP---VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCR-GCAP 200
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
D+V+YN +++A A L+ M +G + +T+N L+ G G DA ++
Sbjct: 201 DVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELL 260
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
+ + +P+ +YN L GL ++ A ELV EM + P+ TF +I +
Sbjct: 261 RNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRK 320
Query: 282 GNLEEAKRW---YNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPL 338
G L++A + +K GC N + ++ +CE+ ++D A L + S C D
Sbjct: 321 GLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTY 380
Query: 339 QLVVDRLAKELRVEEAKELVELGKTNSYCRYNLKF 373
++ L + +A+EL++ N N+ F
Sbjct: 381 NTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTF 415
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 110/244 (45%), Gaps = 9/244 (3%)
Query: 126 TVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTL 185
TV+++ AL + + + + +P ++P+ +YN +I ++G + A ++
Sbjct: 134 TVVAYGALTDGYCRAGRLGDARRVVGGMP----VQPNAYTYNPLIHTLCERGQVRDALSV 189
Query: 186 LYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAI 245
L +M +G D++T+N LL + A ++ + M PN +YN +DG+
Sbjct: 190 LDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCG 249
Query: 246 EKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE---GNLEEAKRWYNKSGCGMNKAI 302
E ALEL+ + S P + ++KG + G+ +E + C N+A
Sbjct: 250 EGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEAT 309
Query: 303 FKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGK 362
F +++ +C KG L A L ++ C + +++ L ++ V+ A L L K
Sbjct: 310 FNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGL--LSK 367
Query: 363 TNSY 366
SY
Sbjct: 368 MKSY 371
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 114/239 (47%), Gaps = 3/239 (1%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I G+ ++ N+ + K G + + Y ++ L +A ++ EE++++ Q
Sbjct: 347 AIINGLCEQRNVDGAMGLLSKMKSYG-CKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQ 405
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
+ LI + + +A +VF +MP + C ++++ ++ + K D+
Sbjct: 406 NGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQ 465
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
LF ++ HK G PD + Y + + D +++ A + +++ GI + +N +L
Sbjct: 466 ALELFNEMGHK-GFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAIL 523
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
LG NG+ A I MV+ P+ +Y ++GLA E +A EL+ ++ S+++
Sbjct: 524 LGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLCSRDV 582
>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
Length = 897
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 111/203 (54%), Gaps = 2/203 (0%)
Query: 87 KDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
K ++ + FT LI + K + A ++F+ M R TV+++ AL+ A + E
Sbjct: 650 KGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQE 709
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
D LF + + GI PDLV YN +I + G++D A ++ EMEKK I D +T+NTL+
Sbjct: 710 TDKLFDEAVRR-GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLM 768
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEIN 265
G GR +A K+ + M ++P++ +YN + G +++ K AL + EM +K N
Sbjct: 769 RGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFN 828
Query: 266 PDVFTFYALIKGFVNEGNLEEAK 288
P + T+ ALI+G G ++A+
Sbjct: 829 PTLLTYNALIQGLCKNGQGDDAE 851
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 97/188 (51%), Gaps = 2/188 (1%)
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
+TA + AL K + K+FDE R ++ +NAL+ + S D + ++
Sbjct: 694 YTALIYAL-SKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM 752
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
K I PD V+YNT+++ G +D A L+ EM ++GI+ DL+T+NTL+ G+ G
Sbjct: 753 -EKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGD 811
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
DA +I M+N P + +YNA + GL Q A +V EM I PD T+ +
Sbjct: 812 VKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYIS 871
Query: 274 LIKGFVNE 281
LI+G E
Sbjct: 872 LIEGLTTE 879
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 148/352 (42%), Gaps = 9/352 (2%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
+VI G ++ +D ++ + G N Y + R ++ +
Sbjct: 519 TVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLT 578
Query: 86 YKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
++ E LI Y + A D M R TV ++N L+ A +
Sbjct: 579 KGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGT 638
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
E L +++ K G+ PD+ +YN +I +G++ A + M ++G+R ++T+ L
Sbjct: 639 EAYELVEEMGGK-GLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTAL 697
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+ G+ + +K+++ V +RP++ YNA ++ + +A E++GEM K I
Sbjct: 698 IYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRI 757
Query: 265 NPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAF- 320
PD T+ L++G G ++EA++ + + G + + L+ KGD+ A
Sbjct: 758 APDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALR 817
Query: 321 ---NLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKTNSYCRY 369
+ + F+ L A +Q + + KE+VE G T Y
Sbjct: 818 IRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTY 869
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 107/228 (46%), Gaps = 14/228 (6%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
+I G KE N+K+ ++ F+ S G R YT + L+ ++ E K +
Sbjct: 662 LINGHCKEGNVKKALEIFENMSRRG-VRATVVTYTALIYALSKKG------QVQETDKLF 714
Query: 87 KDISKEGFTARLI---ALYGKAAMFENARKVFD---EMPGRNCEQTVLSFNALLGACVNS 140
+ + G L+ AL + N + F+ EM + +++N L+
Sbjct: 715 DEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLL 774
Query: 141 KKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLIT 200
+ DE L ++ + GI+PDLV+YNT+I + KG + A + EM KG L+T
Sbjct: 775 GRVDEARKLIDEMTER-GIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLT 833
Query: 201 FNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
+N L+ G NG+ DAE + + MV + P+ +Y + ++GL E +
Sbjct: 834 YNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 881
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 42/196 (21%)
Query: 129 SFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
+FN +L ++ K L + +P P+ V+YNT+I F +G + +A ++ E
Sbjct: 485 TFNIMLRHLCSAGKPARALELLRQMPR-----PNAVTYNTVIAGFCSRGRVQAALDIMRE 539
Query: 189 M-EKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN-VRPNVRSYNARLDG---- 242
M E+ GI + T+ T++ G+ GR +A K+++ M+ V+P YNA + G
Sbjct: 540 MRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQ 599
Query: 243 -------------------------------LAIEKQTKKALELVGEMRSKEINPDVFTF 271
L ++ + +A ELV EM K + PDVFT+
Sbjct: 600 GKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTY 659
Query: 272 YALIKGFVNEGNLEEA 287
LI G EGN+++A
Sbjct: 660 NILINGHCKEGNVKKA 675
>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
Length = 902
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 111/203 (54%), Gaps = 2/203 (0%)
Query: 87 KDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
K ++ + FT LI + K + A ++F+ M R TV+++ AL+ A + E
Sbjct: 655 KGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQE 714
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
D LF + + GI PDLV YN +I + G++D A ++ EMEKK I D +T+NTL+
Sbjct: 715 TDKLFDEAVRR-GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLM 773
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEIN 265
G GR +A K+ + M ++P++ +YN + G +++ K AL + EM +K N
Sbjct: 774 RGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFN 833
Query: 266 PDVFTFYALIKGFVNEGNLEEAK 288
P + T+ ALI+G G ++A+
Sbjct: 834 PTLLTYNALIQGLCKNGQGDDAE 856
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 97/188 (51%), Gaps = 2/188 (1%)
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
+TA + AL K + K+FDE R ++ +NAL+ + S D + ++
Sbjct: 699 YTALIYAL-SKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM 757
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
K I PD V+YNT+++ G +D A L+ EM ++GI+ DL+T+NTL+ G+ G
Sbjct: 758 -EKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGD 816
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
DA +I M+N P + +YNA + GL Q A +V EM I PD T+ +
Sbjct: 817 VKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYIS 876
Query: 274 LIKGFVNE 281
LI+G E
Sbjct: 877 LIEGLTTE 884
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 148/352 (42%), Gaps = 9/352 (2%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
+VI G ++ +D ++ + G N Y + R ++ +
Sbjct: 524 TVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLT 583
Query: 86 YKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
++ E LI Y + A D M R TV ++N L+ A +
Sbjct: 584 KGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGT 643
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
E L +++ K G+ PD+ +YN +I +G++ A + M ++G+R ++T+ L
Sbjct: 644 EAYELVEEMGGK-GLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTAL 702
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+ G+ + +K+++ V +RP++ YNA ++ + +A E++GEM K I
Sbjct: 703 IYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRI 762
Query: 265 NPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAF- 320
PD T+ L++G G ++EA++ + + G + + L+ KGD+ A
Sbjct: 763 APDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALR 822
Query: 321 ---NLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKTNSYCRY 369
+ + F+ L A +Q + + KE+VE G T Y
Sbjct: 823 IRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTY 874
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 107/228 (46%), Gaps = 14/228 (6%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
+I G KE N+K+ ++ F+ S G R YT + L+ ++ E K +
Sbjct: 667 LINGHCKEGNVKKALEIFENMSRRG-VRATVVTYTALIYALSKKG------QVQETDKLF 719
Query: 87 KDISKEGFTARLI---ALYGKAAMFENARKVFD---EMPGRNCEQTVLSFNALLGACVNS 140
+ + G L+ AL + N + F+ EM + +++N L+
Sbjct: 720 DEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLL 779
Query: 141 KKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLIT 200
+ DE L ++ + GI+PDLV+YNT+I + KG + A + EM KG L+T
Sbjct: 780 GRVDEARKLIDEMTER-GIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLT 838
Query: 201 FNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
+N L+ G NG+ DAE + + MV + P+ +Y + ++GL E +
Sbjct: 839 YNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 886
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 42/196 (21%)
Query: 129 SFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
+FN +L ++ K L + +P P+ V+YNT+I F +G + +A ++ E
Sbjct: 490 TFNIMLRHLCSAGKPARALELLRQMPR-----PNAVTYNTVIAGFCSRGRVQAALDIMRE 544
Query: 189 M-EKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN-VRPNVRSYNARLDG---- 242
M E+ GI + T+ T++ G+ GR +A K+++ M+ V+P YNA + G
Sbjct: 545 MRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQ 604
Query: 243 -------------------------------LAIEKQTKKALELVGEMRSKEINPDVFTF 271
L ++ + +A ELV EM K + PDVFT+
Sbjct: 605 GKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTY 664
Query: 272 YALIKGFVNEGNLEEA 287
LI G EGN+++A
Sbjct: 665 NILINGHCKEGNVKKA 680
>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 543
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 128/266 (48%), Gaps = 9/266 (3%)
Query: 110 NARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTI 169
+A VFD+M R C +V++++ LL A + + L ++ K G EPD+V+YN +
Sbjct: 178 DALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSK-GCEPDIVTYNVL 236
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
I A +G + A +L + G + D +T+ +L S+ R+ +A+K+ M + +
Sbjct: 237 INAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDC 296
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
P+ ++NA + L + +A +++ +M PD+ T+ +++ G E ++EA +
Sbjct: 297 APDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIK 356
Query: 290 WYNK-------SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVV 342
+ C ++ F ++ +C+KG D A + C+ D +V
Sbjct: 357 LLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIV 416
Query: 343 DR-LAKELRVEEAKELVELGKTNSYC 367
D L K + EEA +L+ L +N C
Sbjct: 417 DGFLCKSCKTEEALDLLNLMVSNGLC 442
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 123/259 (47%), Gaps = 9/259 (3%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
+E A K+ +M +C ++FNA++ + + + G PD+++Y+
Sbjct: 281 WEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEH-GCTPDIITYS 339
Query: 168 TIIKAFVDKGSLDSA----NTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
+I+ + +D A LL EM K D +TFNT++ G F A K+ +
Sbjct: 340 SIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDE 399
Query: 224 MVNMNVRPNVRSYNARLDG-LAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEG 282
M P++ +YN +DG L +T++AL+L+ M S + PD T+ +L G E
Sbjct: 400 MSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSRED 459
Query: 283 NLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQ 339
+E A R G +K ++ ++ +C+K D A + S C+ D++
Sbjct: 460 EMERAIGMFRRVQAMGLSPDKMLYNAILLGLCKKWRTDLAIDFFAYMVSNGCMPDESTYI 519
Query: 340 LVVDRLAKELRVEEAKELV 358
++V+ +A E +EEAKEL+
Sbjct: 520 ILVEGIAYEGFLEEAKELL 538
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 116/255 (45%), Gaps = 12/255 (4%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGA-CVNSKKFDEVDGLFKDLPHKLGIEPDLVSY 166
+ A ++ + G + V+ N L+ C + + D + + LG +++Y
Sbjct: 77 LDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADA-----ERVVEALGPSATIITY 131
Query: 167 NTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVN 226
NT++ + G++D+A ++ + D T+N L+ G DA +++ M++
Sbjct: 132 NTMVNGYCRAGNIDAARRMI---DSVPFAPDTFTYNPLIRALCVRGCVLDALAVFDDMLH 188
Query: 227 MNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEE 286
P+V +Y+ LD E K+A+ L+ EMRSK PD+ T+ LI ++G++ E
Sbjct: 189 RGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGE 248
Query: 287 AKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVD 343
A + N GC + + ++ +C + A L + FS C D+ V+
Sbjct: 249 ALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVIT 308
Query: 344 RLAKELRVEEAKELV 358
L ++ V A +++
Sbjct: 309 SLCQKGFVGRATKVL 323
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 116/277 (41%), Gaps = 41/277 (14%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKE-GFTARLIALYGKAAMFENARKVFDEM 118
YT ++ L +++R+ +++L E F A + +L K A KV +M
Sbjct: 268 YTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKG-FVGRATKVLAQM 326
Query: 119 PGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL---GIEPDLVSYNTIIKAFVD 175
C ++++++++ ++ DE L K+L ++ PD V++NTII +
Sbjct: 327 SEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQ 386
Query: 176 KGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF-----------------YSNGRFAD-- 216
KG D A ++ EM + G D+ T+N ++ GF SNG D
Sbjct: 387 KGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTT 446
Query: 217 -----------------AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
A ++ + M + P+ YNA L GL + +T A++ M
Sbjct: 447 TYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAILLGLCKKWRTDLAIDFFAYM 506
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGC 296
S PD T+ L++G EG LEEAK C
Sbjct: 507 VSNGCMPDESTYIILVEGIAYEGFLEEAKELLGNLSC 543
>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
Length = 580
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 129/265 (48%), Gaps = 4/265 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I Y E AR++ D M + E ++ +L+ + +E GLF + ++
Sbjct: 214 IIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMV-EI 272
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ P+ V+YNT+I + +KG L+ A + EM KKGI + T+N L+ + GR +A
Sbjct: 273 GLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEA 332
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ + + M + P+ +YN ++G + K+A +L EM SK I P T+ +LI
Sbjct: 333 DDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYV 392
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
++EA + K G + +F ++ C G+++ AF L K + D
Sbjct: 393 LSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPD 452
Query: 335 QAPLQLVVDRLAKELRVEEAKELVE 359
+ ++ +E +VEEA+ L++
Sbjct: 453 EVTFNTLMQGRCREGKVEEARMLLD 477
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 124/271 (45%), Gaps = 8/271 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI Y E A DEM + +V ++N L+ A + E D + K++ K
Sbjct: 284 LIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEM-RKK 342
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
GI PD ++YN +I + G+ A L EM KGI +T+ +L+ R +A
Sbjct: 343 GIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEA 402
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ ++E +++ V P+V +NA +DG ++A L+ EM K + PD TF L++G
Sbjct: 403 DDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQG 462
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAF----NLCKRTFSER 330
EG +EEA+ ++ G + + L+ +GD+ AF + F+
Sbjct: 463 RCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPT 522
Query: 331 CLVDQAPLQLVVDRLAKELRVEEAKELVELG 361
L A ++ + +L E KE+V G
Sbjct: 523 LLTYNALIKCLCKNQEGDLAEELLKEMVNKG 553
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 120/254 (47%), Gaps = 13/254 (5%)
Query: 112 RKVFDEMP---GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
R++FDE+ R ++ + F+ L G KK E G + L G +P++VSYNT
Sbjct: 161 RELFDELTLSRDRLSVKSSIVFDLLEGKL---KKAREFIGFMEGL----GFKPNVVSYNT 213
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
II + +G+++ A +L M KGI D T+ +L+ G GR +A +++ MV +
Sbjct: 214 IIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIG 273
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
+ PN +YN +DG + ++A EM K I P V T+ L+ EG + EA
Sbjct: 274 LVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEAD 333
Query: 289 ---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRL 345
+ K G + + +L+ G+ AF+L S+ ++ L
Sbjct: 334 DMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVL 393
Query: 346 AKELRVEEAKELVE 359
++ R++EA +L E
Sbjct: 394 SRRNRMKEADDLFE 407
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 119/224 (53%), Gaps = 8/224 (3%)
Query: 65 QRLANAKR-FRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNC 123
R NAKR F E+L + ++ +T+ + L + M E A +F+++ +
Sbjct: 359 SRCGNAKRAFDLHNEMLSKGIEPTHVT---YTSLIYVLSRRNRMKE-ADDLFEKILDQGV 414
Query: 124 EQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSA 182
V+ FNA++ G C N + L K++ K + PD V++NT+++ +G ++ A
Sbjct: 415 SPDVIMFNAMIDGHCANGN-VERAFMLLKEMDRK-SVPPDEVTFNTLMQGRCREGKVEEA 472
Query: 183 NTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDG 242
LL EM+ +GI+ D I++NTL+ G+ G DA + + M+++ P + +YNA +
Sbjct: 473 RMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKC 532
Query: 243 LAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEE 286
L ++ A EL+ EM +K I+PD T+ +LI+G N L E
Sbjct: 533 LCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVE 576
>gi|302786208|ref|XP_002974875.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
gi|300157770|gb|EFJ24395.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
Length = 382
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 116/239 (48%), Gaps = 3/239 (1%)
Query: 122 NCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDS 181
+ + V+S+ L+ + D LF+ + G P+ +YN ++ + LD+
Sbjct: 41 HAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDA 100
Query: 182 ANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLD 241
A ++ E K+ D++T+NTL+ + GR +A + M P + S+NA +
Sbjct: 101 ARAVIAEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIIT 160
Query: 242 GLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGM 298
GL ++ ALE+ EM ++ +P++ T+ +I G L+EA++ ++ GC
Sbjct: 161 GLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRP 220
Query: 299 NKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
+ + LV G LD A L +R S+ C+ D +V+D+L K RV++A E+
Sbjct: 221 DLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEI 279
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 126/283 (44%), Gaps = 3/283 (1%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I G+ K + D F+K G R N Y V L R ++ ++
Sbjct: 51 TLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARK 110
Query: 86 YKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
+D + + T L+A + + A F +M T++SFNA++ +++
Sbjct: 111 -RDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLA 169
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
+ +F ++ + P+LV+Y+ +I LD A LL M +G R DL+ + L
Sbjct: 170 DALEVFNEMIDR-DFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPL 228
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+LGF + GR A + MV+ P+V +Y +D L + A E+ E+ + +
Sbjct: 229 VLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKC 288
Query: 265 NPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKAIFKLLV 307
+P+V T+ ALI G+ ++E + + C N + ++
Sbjct: 289 SPNVVTYSALIGGYCRASRVDEGGKVMREMACRPNVVTYNTMI 331
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 117/253 (46%), Gaps = 5/253 (1%)
Query: 122 NCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDS 181
C ++NAL+ + D + + K PD+V+YNT++ A G +D
Sbjct: 77 GCRPNAFTYNALVDGLCKQDRLDAARAVIAE-ARKRDFAPDVVTYNTLMAALFQLGRVDE 135
Query: 182 ANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLD 241
A +M ++G L++FN ++ G R ADA +++ M++ + PN+ +Y+ +D
Sbjct: 136 ALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVID 195
Query: 242 GLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK---RWYNKSGCGM 298
GL Q +A +L+ M S+ PD+ + L+ GF G L+ A R GC
Sbjct: 196 GLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIP 255
Query: 299 NKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEE-AKEL 357
+ + +++ +C+ G +D A + + + +C + ++ + RV+E K +
Sbjct: 256 DVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVM 315
Query: 358 VELGKTNSYCRYN 370
E+ + YN
Sbjct: 316 REMACRPNVVTYN 328
>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 145/304 (47%), Gaps = 7/304 (2%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
+VI G+ K +L ++ F G R + Y + L+N+ R+ +L +
Sbjct: 189 TVINGLCKNRDLNNALEVFYCMEKKG-IRADAVTYNTLISGLSNSGRWTDAARLLRDMVK 247
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFD 144
K F LI + K AR ++ EM R+ V ++N+L+ G C++
Sbjct: 248 RKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGC-LG 306
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
+ +F DL G PD+V+YNT+I F ++ L EM +G+ D T+NTL
Sbjct: 307 DAKYMF-DLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTL 365
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+ G+ G+ A+K++ MV+ V P++ +YN LD L + +KAL +V +++ E+
Sbjct: 366 IHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEM 425
Query: 265 NPDVFTFYALIKGFVNEGNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFN 321
+ D+ T+ +I+G L+EA R + G + + ++ +C KG A
Sbjct: 426 DVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADK 485
Query: 322 LCKR 325
LC+R
Sbjct: 486 LCRR 489
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 104/206 (50%), Gaps = 5/206 (2%)
Query: 126 TVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTL 185
++++ +LL +F E L + G P++V YNT+I L++A +
Sbjct: 148 SIVTLGSLLNGFCQGNRFQEAVSLVDSMD-GFGFVPNVVIYNTVINGLCKNRDLNNALEV 206
Query: 186 LYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAI 245
Y MEKKGIR D +T+NTL+ G ++GR+ DA ++ MV + PNV + A +D
Sbjct: 207 FYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVK 266
Query: 246 EKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAI 302
E +A L EM + + P+VFT+ +LI GF G L +AK ++ GC +
Sbjct: 267 EGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVT 326
Query: 303 FKLLVPFVCEKGDLDFAFNL-CKRTF 327
+ L+ C+ ++ L C+ T+
Sbjct: 327 YNTLITGFCKSKRVEDGMKLFCEMTY 352
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 101/289 (34%), Gaps = 74/289 (25%)
Query: 142 KFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL--- 198
KFD+ LF ++ I P +V + ++ D L ++ME GI DL
Sbjct: 59 KFDDAFSLFCEMLQSRPI-PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSF 117
Query: 199 --------------------------------ITFNTLLLGFYSNGRFADAEKIWETMVN 226
+T +LL GF RF +A + ++M
Sbjct: 118 TILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDG 177
Query: 227 MNVRPNVRSYNARLDGLAIEKQTKKALE-------------------------------- 254
PNV YN ++GL + ALE
Sbjct: 178 FGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTD 237
Query: 255 ---LVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVP 308
L+ +M ++I+P+V F ALI FV EGNL EA+ Y + N + L+
Sbjct: 238 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN 297
Query: 309 FVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
C G L A + S+ C D ++ K RVE+ +L
Sbjct: 298 GFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKL 346
>gi|413951889|gb|AFW84538.1| hypothetical protein ZEAMMB73_463361, partial [Zea mays]
Length = 423
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 118/260 (45%), Gaps = 43/260 (16%)
Query: 98 LIALYGKAAMFENARKVFDEMPGR-NCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPH- 155
+++ + +A M + A F ++P C + S NALL A V ++++ E D F L H
Sbjct: 130 VLSAFSRALMPDAALAAFRDLPSLLGCNPGIRSHNALLDAFVRARRYSEADAFFASLSHG 189
Query: 156 -------------------------------------KLGIEPDLVSYNTIIKAFVDKGS 178
+ G+ PD V+Y+T++ V
Sbjct: 190 ACGRRLAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLVKHDQ 249
Query: 179 LDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMV-NMNVRPNVRSYN 237
LD+A LL EM G++ D + +N LL G + G F A K+WE +V + PN+ +Y
Sbjct: 250 LDNALDLLDEMPDYGVQADAVCYNALLSGCFKTGMFEKAIKVWEQLVRDPGASPNLATYK 309
Query: 238 ARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KS 294
LDGL + K+A E+ M + PD T+ LI G G+++ A R Y+ K+
Sbjct: 310 VMLDGLCKLGRFKEAGEVWSRMVANNHQPDTVTYGILIHGLCRSGDVDSAARVYSDMVKA 369
Query: 295 GCGMNKAIFKLLVPFVCEKG 314
G ++ A++ L+ C+ G
Sbjct: 370 GLVLDVAVYNSLIKGFCKVG 389
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 76/175 (43%), Gaps = 36/175 (20%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL-------PH- 155
K +NA + DEMP + + +NALL C + F++ +++ L P+
Sbjct: 246 KHDQLDNALDLLDEMPDYGVQADAVCYNALLSGCFKTGMFEKAIKVWEQLVRDPGASPNL 305
Query: 156 -----------KLG----------------IEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
KLG +PD V+Y +I G +DSA + +
Sbjct: 306 ATYKVMLDGLCKLGRFKEAGEVWSRMVANNHQPDTVTYGILIHGLCRSGDVDSAARVYSD 365
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
M K G+ LD+ +N+L+ GF GR +A K W++ +R + +YN + GL
Sbjct: 366 MVKAGLVLDVAVYNSLIKGFCKVGRTGEAWKFWDSTGFSGIR-QITTYNVMMKGL 419
>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
Length = 528
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 111/203 (54%), Gaps = 2/203 (0%)
Query: 87 KDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
K ++ + FT LI + K + A ++F+ M R TV+++ AL+ A + E
Sbjct: 281 KGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQE 340
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
D LF + + GI PDLV YN +I + G++D A ++ EMEKK I D +T+NTL+
Sbjct: 341 TDKLFDEAVRR-GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLM 399
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEIN 265
G GR +A K+ + M ++P++ +YN + G +++ K AL + EM +K N
Sbjct: 400 RGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFN 459
Query: 266 PDVFTFYALIKGFVNEGNLEEAK 288
P + T+ ALI+G G ++A+
Sbjct: 460 PTLLTYNALIQGLCKNGQGDDAE 482
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 97/188 (51%), Gaps = 2/188 (1%)
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
+TA + AL K + K+FDE R ++ +NAL+ + S D + ++
Sbjct: 325 YTALIYAL-SKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM 383
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
K I PD V+YNT+++ G +D A L+ EM ++GI+ DL+T+NTL+ G+ G
Sbjct: 384 EKKR-IAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGD 442
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
DA +I M+N P + +YNA + GL Q A +V EM I PD T+ +
Sbjct: 443 VKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYIS 502
Query: 274 LIKGFVNE 281
LI+G E
Sbjct: 503 LIEGLTTE 510
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 131/301 (43%), Gaps = 5/301 (1%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
+VI G ++ +D ++ + G N Y + R ++ +
Sbjct: 150 TVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLT 209
Query: 86 YKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
++ E LI Y + A D M R TV ++N L+ A +
Sbjct: 210 KGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGT 269
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
E L +++ K G+ PD+ +YN +I +G++ A + M ++G+R ++T+ L
Sbjct: 270 EAYELVEEMGGK-GLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTAL 328
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+ G+ + +K+++ V +RP++ YNA ++ + +A E++GEM K I
Sbjct: 329 IYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRI 388
Query: 265 NPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFN 321
PD T+ L++G G ++EA++ + + G + + L+ KGD+ A
Sbjct: 389 APDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALR 448
Query: 322 L 322
+
Sbjct: 449 I 449
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 105/222 (47%), Gaps = 2/222 (0%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
+I G KE N+K+ ++ F+ S G R YT + L+ + + +++ + +
Sbjct: 293 LINGHCKEGNVKKALEIFENMSRRG-VRATVVTYTALIYALSKKGQVQETDKLFDEAVRR 351
Query: 87 KDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEV 146
LI + + + A ++ EM + +++N L+ + DE
Sbjct: 352 GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEA 411
Query: 147 DGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLL 206
L ++ + GI+PDLV+YNT+I + KG + A + EM KG L+T+N L+
Sbjct: 412 RKLIDEMTER-GIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQ 470
Query: 207 GFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
G NG+ DAE + + MV + P+ +Y + ++GL E +
Sbjct: 471 GLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 512
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 102/228 (44%), Gaps = 45/228 (19%)
Query: 129 SFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
+FN +L ++ K L + +P P+ V+YNT+I F +G + +A ++ E
Sbjct: 116 TFNIMLRHLCSAGKPARALELLRQMPR-----PNAVTYNTVIAGFCSRGRVQAALDIMRE 170
Query: 189 M-EKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN-VRPNVRSYNARLDG---- 242
M E+ GI + T+ T++ G+ GR +A K+++ M+ V+P YNA + G
Sbjct: 171 MRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQ 230
Query: 243 -------------------------------LAIEKQTKKALELVGEMRSKEINPDVFTF 271
L ++ + +A ELV EM K + PDVFT+
Sbjct: 231 GKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTY 290
Query: 272 YALIKGFVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDL 316
LI G EGN+++A + ++ G + L+ + +KG +
Sbjct: 291 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQV 338
>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
Length = 558
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 164/348 (47%), Gaps = 10/348 (2%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I + K ++ ++ FK+ G R N Y+ + L + R+ ++L +
Sbjct: 189 TIIDSLCKYRHVDDALNLFKEMETKG-IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 247
Query: 86 YK-DISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
K + + F A LI + K F A K+ D+M R+ + + ++N+L+ + D
Sbjct: 248 KKINPNLVTFNA-LIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 306
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
+ +F+ + K PDL +YNT+IK F ++ L EM +G+ D +T+ TL
Sbjct: 307 KAKQMFEFMVSK-DCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 365
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+ G + +G +A+K+++ MV+ V P++ +Y+ LDGL + +KALE+ M+ EI
Sbjct: 366 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 425
Query: 265 NPDVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFN 321
D++ + +I+G G +++ + + G N + ++ +C K L A+
Sbjct: 426 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 485
Query: 322 LCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKTNSYCRY 369
L K+ + L D ++ LR + EL + CR+
Sbjct: 486 LLKKMKEDGPLPDSGTYNTLI---RAHLRDGDKAASAELIREMRSCRF 530
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 102/191 (53%), Gaps = 4/191 (2%)
Query: 101 LYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIE 160
L+ KA+ A + D M R C+ ++++ ++ D L + IE
Sbjct: 126 LHNKAS---EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM-EAAKIE 181
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
D+V +NTII + +D A L EME KGIR +++T+++L+ S GR++DA ++
Sbjct: 182 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQL 241
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
M+ + PN+ ++NA +D E + +A +L +M + I+PD+FT+ +LI GF
Sbjct: 242 LSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCM 301
Query: 281 EGNLEEAKRWY 291
L++AK+ +
Sbjct: 302 HDRLDKAKQMF 312
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 116/260 (44%), Gaps = 4/260 (1%)
Query: 102 YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGL-FKDLPHKLGIE 160
+GK ++A +F M ++ FN LL A KKFD V L KLG E
Sbjct: 17 WGKDLKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYE 76
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
P +V+ ++++ + + A L+ +M + G R D ITF TL+ G + + + ++A +
Sbjct: 77 PSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVAL 136
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
+ MV +PN+ +Y ++GL A L+ +M + +I DV F +I
Sbjct: 137 VDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCK 196
Query: 281 EGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAP 337
++++A + + G N + L+ +C G A L ++ +
Sbjct: 197 YRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT 256
Query: 338 LQLVVDRLAKELRVEEAKEL 357
++D KE + EA++L
Sbjct: 257 FNALIDAFVKEGKFVEAEKL 276
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 86/179 (48%), Gaps = 2/179 (1%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
+NA+KVF +M +++++ LL N+ K ++ +F D K I+ D+ Y T
Sbjct: 376 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVF-DYMQKSEIKLDIYIYTT 434
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
+I+ G +D L + KG++ +++T+NT++ G S +A + + M
Sbjct: 435 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 494
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
P+ +YN + + + EL+ EMRS D T L+ +++G L+++
Sbjct: 495 PLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTI-GLVANMLHDGRLDKS 552
>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
Length = 442
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 143/303 (47%), Gaps = 7/303 (2%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMP 119
Y ++ L +A+R+ +E++ + E +I + + + A ++ ++M
Sbjct: 115 YNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMS 174
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL 179
C ++++NA++ + D GL + G +PD+V+YNT++K
Sbjct: 175 KHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKM-KSYGCKPDIVTYNTLLKGLCSAARW 233
Query: 180 DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNAR 239
A L+ M + G D +TFNTL+ G DA ++++ M + PN +Y+
Sbjct: 234 VDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTI 293
Query: 240 LDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN-LEEAKRWYNK---SG 295
+ GLA + +ALEL EM K NPD Y L+ +N+ + +EEA + K SG
Sbjct: 294 ISGLAKATKLDQALELFNEMGHKGFNPD--KIYQLLAECLNDDDTIEEAIQTVRKLQDSG 351
Query: 296 CGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAK 355
+ ++ ++ +C G +FA ++ S C+ D ++++ LA E + EA+
Sbjct: 352 ISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEAR 411
Query: 356 ELV 358
EL+
Sbjct: 412 ELL 414
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 130/298 (43%), Gaps = 39/298 (13%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + +A V D+M R C V+++N LL A + + + L DL
Sbjct: 13 LIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELI-DLMRAE 71
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G P+ V+YN ++ +G +D A LL + G + + +NT+L G S R+ DA
Sbjct: 72 GCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDA 131
Query: 218 EKIWETMVNMNVRP-----------------------------------NVRSYNARLDG 242
+++ M+ N P N+ +YNA ++G
Sbjct: 132 DELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIING 191
Query: 243 LAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEG---NLEEAKRWYNKSGCGMN 299
L ++ A+ L+ +M+S PD+ T+ L+KG + + EE ++GC +
Sbjct: 192 LCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPD 251
Query: 300 KAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
F L+ F+C+KG + A + K+ + C + ++ LAK ++++A EL
Sbjct: 252 NVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALEL 309
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 114/239 (47%), Gaps = 3/239 (1%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I G+ ++ N+ + K G + + Y ++ L +A R+ EE++++ Q
Sbjct: 187 AIINGLCEQRNVDGAMGLLSKMKSYG-CKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQ 245
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
+ LI + + +A +VF +MP + C ++++ ++ + K D+
Sbjct: 246 NGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQ 305
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
LF ++ HK G PD + Y + + D +++ A + +++ GI + +N +L
Sbjct: 306 ALELFNEMGHK-GFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAIL 363
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
LG NG+ A I MV+ P+ +Y ++GLA E +A EL+ ++ S+++
Sbjct: 364 LGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLCSRDV 422
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 100/219 (45%), Gaps = 3/219 (1%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G PD+V+YN +++A A L+ M +G + +T+N L+ G G DA
Sbjct: 37 GCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDA 96
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ + + +P+ +YN L GL ++ A ELV EM + P+ TF +I
Sbjct: 97 LELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYS 156
Query: 278 FVNEGNLEEAKRW---YNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
+G L++A + +K GC N + ++ +CE+ ++D A L + S C D
Sbjct: 157 LCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPD 216
Query: 335 QAPLQLVVDRLAKELRVEEAKELVELGKTNSYCRYNLKF 373
++ L R +A+EL++ N N+ F
Sbjct: 217 IVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTF 255
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 98/213 (46%), Gaps = 5/213 (2%)
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
+ ++P+ +YN +I ++G + A ++L +M +G D++T+N LL +
Sbjct: 1 MPVQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQ 60
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
A ++ + M PN +YN +DG+ E ALEL+ + S P + ++K
Sbjct: 61 AMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLK 120
Query: 277 GFVNE---GNLEEAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV 333
G + G+ +E + C N+A F +++ +C KG L A L ++ C
Sbjct: 121 GLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTA 180
Query: 334 DQAPLQLVVDRLAKELRVEEAKELVELGKTNSY 366
+ +++ L ++ V+ A L L K SY
Sbjct: 181 NIVTYNAIINGLCEQRNVDGAMGL--LSKMKSY 211
>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 138/263 (52%), Gaps = 4/263 (1%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I G+ K ++ ++ FK+ G R N Y+ + L N R+ +L +
Sbjct: 56 TIIDGLCKYKHMDDALNLFKEMETKG-IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE 114
Query: 86 YKDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
K I+ + FT + LI + K A K++DEM R+ + +++++++L+ + D
Sbjct: 115 RK-INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD 173
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
E +F+ + K PD+V+YNT+IK F ++ + EM ++G+ + +T+N L
Sbjct: 174 EAKQMFEFMVSKHCF-PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 232
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+ G + G A++I++ MV+ V PN+ +YN LDGL + +KA+ + ++ ++
Sbjct: 233 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 292
Query: 265 NPDVFTFYALIKGFVNEGNLEEA 287
P ++T+ +I+G G +E+
Sbjct: 293 EPTIYTYNIMIEGMCKAGKVEDG 315
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 107/221 (48%), Gaps = 7/221 (3%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G +PDLV+Y ++ +G D A LL +ME+ + ++ +NT++ G DA
Sbjct: 11 GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 70
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+++ M +RPNV +Y++ + L + A L+ +M ++INPDVFTF ALI
Sbjct: 71 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 130
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
FV EG L EA++ Y+ K + + L+ C LD A + + S+ C D
Sbjct: 131 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 190
Query: 335 QAPLQLVVDRLAKELRVEEA----KELVELGKTNSYCRYNL 371
++ K RVEE +E+ + G + YN+
Sbjct: 191 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 231
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 114/252 (45%), Gaps = 8/252 (3%)
Query: 42 DKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTAR---- 97
D+ ++ + F + + V K F + + E + ++++S+ G
Sbjct: 170 DRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTY 229
Query: 98 --LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPH 155
LI +A + A+++F EM ++++N LL + K ++ +F+ L
Sbjct: 230 NILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL-Q 288
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
+ +EP + +YN +I+ G ++ L + KG++ D++ +NT++ GF G
Sbjct: 289 RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKE 348
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
+A+ +++ M PN YN + + + + EL+ EMRS D T L+
Sbjct: 349 EADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI-GLV 407
Query: 276 KGFVNEGNLEEA 287
+++G L+++
Sbjct: 408 TNMLHDGRLDKS 419
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 131/306 (42%), Gaps = 43/306 (14%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + + F EM C V+++N L+ A + DE GL K + K
Sbjct: 16 LIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSK- 74
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++P+L+SYN II +GS+ A +L EM KG D +T+NTLL G+ G F A
Sbjct: 75 GMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQA 134
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
I MV V P+V +Y A ++ + + +A+E +MR + + P+ T+ LI G
Sbjct: 135 LVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDG 194
Query: 278 FVNEGNLEEAKRWYN--------------------------------------KSGCGMN 299
F +G L EA R N + G +
Sbjct: 195 FSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPD 254
Query: 300 KAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA----K 355
+ ++ C KG+LD AF + + + D ++ L + R+ EA +
Sbjct: 255 VVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQ 314
Query: 356 ELVELG 361
E++++G
Sbjct: 315 EMLDMG 320
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 154/369 (41%), Gaps = 66/369 (17%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMP 119
YT + + A+ E + + E LI + + + A ++ +EM
Sbjct: 153 YTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMT 212
Query: 120 GRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGS 178
+V+++NA + G CV ++ +E G+ +++ K G+ PD+VSY+TII F KG
Sbjct: 213 ESGFSPSVVTYNAFIHGHCV-LERMEEALGVVQEMVEK-GLAPDVVSYSTIISGFCRKGE 270
Query: 179 LDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNA 238
LD A + EM +KG+ D +T+++L+ G R +A + + M++M + P+ +Y
Sbjct: 271 LDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTT 330
Query: 239 RLDGLAIEKQTKKALELVGEMRSKEINPDVFTF--------------------------- 271
++ +E KAL L EM K PD T+
Sbjct: 331 LINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEE 390
Query: 272 -----------------------YALIKGFVNEGNLEEAKRWY-------NKSGCGMNKA 301
ALIKGF +G + EA R + +K G +A
Sbjct: 391 SVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPG----EA 446
Query: 302 IFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELG 361
++ +++ C G+L AFNL K + + ++ L KE EE E++ G
Sbjct: 447 VYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVI--G 504
Query: 362 KTNSYCRYN 370
T CR N
Sbjct: 505 DTLRSCRLN 513
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 107/219 (48%), Gaps = 7/219 (3%)
Query: 159 IEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAE 218
+ P++ +YN +I+ F G L EME+ G +++T+NTL+ + GR +A
Sbjct: 6 VSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAF 65
Query: 219 KIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGF 278
+ ++M + ++PN+ SYN ++GL E K+A E++ EM K PD T+ L+ G+
Sbjct: 66 GLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGY 125
Query: 279 VNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQ 335
EGN +A + ++G + + L+ +C+ +L+ A + ++
Sbjct: 126 CKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNE 185
Query: 336 APLQLVVDRLAKELRVEEA----KELVELGKTNSYCRYN 370
++D +++ + EA E+ E G + S YN
Sbjct: 186 RTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYN 224
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 48/99 (48%)
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
M + + ++ T+N L+ GF S G + M PNV +YN +D +
Sbjct: 1 MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+A L+ M SK + P++ ++ +I G EG+++EA
Sbjct: 61 IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEA 99
>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 669
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 141/336 (41%), Gaps = 8/336 (2%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
+I G+ +E + + + S G F+ + YT ++ L A+R+ ++ +
Sbjct: 217 IINGMCREGRVDDAKEILNRLSSYG-FQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDK 275
Query: 87 KDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEV 146
K + E L+ + + M E A +V +M C N ++ A + D+
Sbjct: 276 KCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDA 335
Query: 147 DGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLL 206
++ G PD +SY T+++ G + A LL EM +K + +TFNT +
Sbjct: 336 YDFLNNM-GMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFIC 394
Query: 207 GFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINP 266
G A K+ E M + +YNA + G ++ + ALEL + + P
Sbjct: 395 ILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCE---P 451
Query: 267 DVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLC 323
+ T+ L+ G + L+ A + C +N F +LV F C+KG ++ A L
Sbjct: 452 NTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELV 511
Query: 324 KRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ C + ++D + K+ EEA EL+
Sbjct: 512 NQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLH 547
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 163/340 (47%), Gaps = 24/340 (7%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTN--TGIYTGTVQRLANAKRFRWIEEILEHQK 84
VI I K+ R+ D + +++G + N T YT ++ L A R+ +E+L
Sbjct: 322 VINAICKQG---RVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMV 378
Query: 85 QYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKF 143
+ E I + + + E A K+ + MP C ++++NAL+ G CV +
Sbjct: 379 RKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGR-V 437
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT 203
D LF +LP EP+ ++Y T++ LD+A LL M +K L+ +TFN
Sbjct: 438 DSALELFNNLP----CEPNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNV 493
Query: 204 LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
L+ F G +A ++ M+ PN+ ++N LDG+ + +++ALEL+ + SK
Sbjct: 494 LVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKG 553
Query: 264 INPDVFTFYALIKGFVNEGNLEEAKRWYN-------KSGCGM-NKAIFKLLVPFVCEKGD 315
++ D T+ +++ E EEA + + + GM NK +F L C++ +
Sbjct: 554 VSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFAL-----CKRCE 608
Query: 316 LDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAK 355
D A + S C+ +++ ++++ LA E ++EA+
Sbjct: 609 TDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAR 648
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 120/264 (45%), Gaps = 7/264 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+A Y + + AR++ MP ++ ++ + + + L D+ +
Sbjct: 115 LVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQR- 170
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G +P +V+Y +++A A +L EM KG +++T+N ++ G GR DA
Sbjct: 171 GCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 230
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++I + + +P++ SY L GL ++ L EM K+ P+ TF L++
Sbjct: 231 KEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRF 290
Query: 278 FVNEGNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
F G +E A + ++ GC N + +++ +C++G +D A++ C D
Sbjct: 291 FCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPD 350
Query: 335 QAPLQLVVDRLAKELRVEEAKELV 358
V+ L + R E AKEL+
Sbjct: 351 TISYTTVLRGLCRAGRWEHAKELL 374
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 119/254 (46%), Gaps = 4/254 (1%)
Query: 110 NARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTI 169
+A + D+M R C+ +V+++ LL A S F E + ++ K G P++V+YN I
Sbjct: 159 DALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAK-GCTPNIVTYNVI 217
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
I +G +D A +L + G + D++++ T+L G + R+ D + ++ MV+
Sbjct: 218 INGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKC 277
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
PN +++ + ++A++++ +M P+ +I +G +++A
Sbjct: 278 VPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYD 337
Query: 290 WYNKSG---CGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLA 346
+ N G C + + ++ +C G + A L + C ++ + L
Sbjct: 338 FLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILC 397
Query: 347 KELRVEEAKELVEL 360
++ +E+A +L+EL
Sbjct: 398 QKGLIEQAIKLIEL 411
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/271 (19%), Positives = 100/271 (36%), Gaps = 70/271 (25%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF--------- 208
G PD+ +I+ +G A +L E G +D+ +NTL+ G+
Sbjct: 69 GEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYGRLDAA 128
Query: 209 -----------------------YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAI 245
GR DA + + M+ +P+V +Y L+ +
Sbjct: 129 RRLIASMPVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCK 188
Query: 246 EKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSG---------- 295
+A+ ++ EMR+K P++ T+ +I G EG +++AK N+
Sbjct: 189 SSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVS 248
Query: 296 ----------------------------CGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTF 327
C N+ F +LV F C G ++ A + ++
Sbjct: 249 YTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMS 308
Query: 328 SERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
C + +V++ + K+ RV++A + +
Sbjct: 309 QHGCTPNTTLCNIVINAICKQGRVDDAYDFL 339
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 93/210 (44%), Gaps = 3/210 (1%)
Query: 56 NTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTAR-LIALYGKAAMFENARKV 114
NT YT + L +A+R E+L Q KD T L++ + + E A ++
Sbjct: 452 NTITYTTLLTGLCHAERLDAAAELLAGMIQ-KDCPLNAVTFNVLVSFFCQKGFVEEAMEL 510
Query: 115 FDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFV 174
++M C +++FN LL +E L L K G+ D ++Y++++
Sbjct: 511 VNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSK-GVSLDTITYSSVVDVLS 569
Query: 175 DKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVR 234
+ + A +L+ ++ G+R + +N +L A + MV+ PN
Sbjct: 570 REDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNES 629
Query: 235 SYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+Y ++GLA E K+A ++ E+ +K +
Sbjct: 630 TYIILIEGLAHEGLLKEARYVLSELYAKGV 659
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 88/200 (44%), Gaps = 8/200 (4%)
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
++ + + L A L+ +G D+ L+ GR +DA ++ T
Sbjct: 46 LRRLIARDDLAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGA 105
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
+V +YN + G + A L+ M + PD +T+ +I+G + G + +A
Sbjct: 106 PVDVFAYNTLVAGYCRYGRLDAARRLIASM---PVPPDAYTYTPIIRGLCDRGRVGDALA 162
Query: 290 WYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLA 346
+ + GC + + +L+ VC+ A N+ ++ C + ++++ +
Sbjct: 163 LLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMC 222
Query: 347 KELRVEEAKELVELGKTNSY 366
+E RV++AKE+ L + +SY
Sbjct: 223 REGRVDDAKEI--LNRLSSY 240
>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
Length = 432
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 116/239 (48%), Gaps = 3/239 (1%)
Query: 122 NCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDS 181
+ + V+S+ L+ + D LF+ + G P+ +YN ++ + LD+
Sbjct: 91 HAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDA 150
Query: 182 ANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLD 241
A ++ E K+ D++T+NTL+ + GR +A + M P + S+NA +
Sbjct: 151 ARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIIT 210
Query: 242 GLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGM 298
GL ++ ALE+ EM ++ +P++ T+ +I G L+EA++ ++ GC
Sbjct: 211 GLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRP 270
Query: 299 NKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
+ + LV G LD A L +R S+ C+ D +V+D+L K RV++A E+
Sbjct: 271 DLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEI 329
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 126/283 (44%), Gaps = 3/283 (1%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I G+ K + D F+K G R N Y V L R ++ ++
Sbjct: 101 TLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARK 160
Query: 86 YKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
+D + + T L+A + + A F +M T++SFNA++ +++
Sbjct: 161 -RDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLA 219
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
+ +F ++ + P+LV+Y+ +I LD A LL M +G R DL+ + L
Sbjct: 220 DALEVFNEMIDR-DFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPL 278
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+LGF + GR A + MV+ P+V +Y +D L + A E+ E+ + +
Sbjct: 279 VLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKC 338
Query: 265 NPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKAIFKLLV 307
+P+V T+ ALI G+ ++E + + C N + ++
Sbjct: 339 SPNVVTYSALIGGYCRASRVDEGGKVMREMACRPNVVTYNTMI 381
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 117/252 (46%), Gaps = 5/252 (1%)
Query: 123 CEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSA 182
C ++NAL+ + D + + K PD+V+YNT++ A G +D A
Sbjct: 128 CRPNAFTYNALVDGLCKQDRLDAARAVITE-ARKRDFAPDVVTYNTLMAALFQLGRVDEA 186
Query: 183 NTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDG 242
+M ++G L++FN ++ G R ADA +++ M++ + PN+ +Y+ +DG
Sbjct: 187 LATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDG 246
Query: 243 LAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK---RWYNKSGCGMN 299
L Q +A +L+ M S+ PD+ + L+ GF G L+ A R GC +
Sbjct: 247 LCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPD 306
Query: 300 KAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEE-AKELV 358
+ +++ +C+ G +D A + + + +C + ++ + RV+E K +
Sbjct: 307 VVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMR 366
Query: 359 ELGKTNSYCRYN 370
E+ + YN
Sbjct: 367 EMACRPNVVTYN 378
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 110/262 (41%), Gaps = 42/262 (16%)
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRL- 196
V + ++ LF++ P +L V+YN +I+ F + LD+A +LL EM+ +G++
Sbjct: 2 VRAGSHNQALQLFRENPCQLPASS--VTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCN 59
Query: 197 -----------------------------------DLITFNTLLLGFYSNGRFADAEKIW 221
D++++ TL+ G GR A ++
Sbjct: 60 DRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLF 119
Query: 222 ETMVNM-NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
MV RPN +YNA +DGL + + A ++ E R ++ PDV T+ L+
Sbjct: 120 RKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQ 179
Query: 281 EGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAP 337
G ++EA + + G F ++ +C L A + +
Sbjct: 180 LGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVT 239
Query: 338 LQLVVDRLAKELRVEEAKELVE 359
+V+D L K +++EA++L++
Sbjct: 240 YSVVIDGLCKSDQLDEAQQLLD 261
>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 128/252 (50%), Gaps = 4/252 (1%)
Query: 110 NARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTI 169
+A K+ +M + +V++FN L+ + + +P K G +P+ +SYN +
Sbjct: 327 DAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMP-KHGCQPNSLSYNPL 385
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
+ F + +D A L M +G D++T+NT+L +G+ DA +I + +
Sbjct: 386 LHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGC 445
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
P + +YN +DGLA +T KA++L+ EMR+K++ PD T+ +L+ G EG ++EA +
Sbjct: 446 SPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIK 505
Query: 290 WYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLA 346
+++ + G N F ++ +C+ D A + + C + ++++ LA
Sbjct: 506 FFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLA 565
Query: 347 KELRVEEAKELV 358
E +EA EL+
Sbjct: 566 YEGMAKEALELL 577
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 144/324 (44%), Gaps = 13/324 (4%)
Query: 35 NNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGF 94
NN ++D+ S D+ + T ++ L ++ + + E+L+ Q +D +
Sbjct: 189 NNALSVLDRMSVSPDVVTYNT-------ILRSLCDSGKLKQAMEVLDRMLQ-RDCYPDVI 240
Query: 95 T-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
T LI + + A K+ DEM R C V+++N L+ + DE D+
Sbjct: 241 TYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDM 300
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
P G +P+++++N I+++ G A LL +M +KG ++TFN L+ G
Sbjct: 301 PSS-GCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGL 359
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
A I E M +PN SYN L G EK+ +A+E + M S+ PD+ T+
Sbjct: 360 LGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNT 419
Query: 274 LIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSER 330
++ +G +E+A N+ GC + ++ + + G A L ++
Sbjct: 420 MLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKD 479
Query: 331 CLVDQAPLQLVVDRLAKELRVEEA 354
D +V L++E +V+EA
Sbjct: 480 LKPDTITYSSLVGGLSREGKVDEA 503
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 127/307 (41%), Gaps = 47/307 (15%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
++ GI KE RL + K +D+ + T + + RW ++ +K
Sbjct: 280 LVNGICKEG---RLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRW----MDAEKLL 332
Query: 87 KDISKEGFTAR------LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNS 140
D+ ++GF+ LI + + A + ++MP C+ LS+N LL
Sbjct: 333 ADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKE 392
Query: 141 KKFDEV----------------------------DGLFKDLPHKL------GIEPDLVSY 166
KK D DG +D L G P L++Y
Sbjct: 393 KKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITY 452
Query: 167 NTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVN 226
NT+I G A LL EM K ++ D IT+++L+ G G+ +A K +
Sbjct: 453 NTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFER 512
Query: 227 MNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEE 286
M VRPN ++N+ + GL +QT +A++ + M ++ P ++ LI+G EG +E
Sbjct: 513 MGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKE 572
Query: 287 AKRWYNK 293
A N+
Sbjct: 573 ALELLNE 579
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 136/291 (46%), Gaps = 13/291 (4%)
Query: 73 FRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNA 132
F+++E ++ H DI LI + + A K+ + + G V+++N
Sbjct: 122 FKFLENMVYH-GNVPDIIP---CTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNV 177
Query: 133 LL-GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEK 191
++ G C K E++ L ++ + PD+V+YNTI+++ D G L A +L M +
Sbjct: 178 MISGYC----KAGEINNALSVL-DRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQ 232
Query: 192 KGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKK 251
+ D+IT+ L+ + A K+ + M + P+V +YN ++G+ E + +
Sbjct: 233 RDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDE 292
Query: 252 ALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVP 308
A++ + +M S P+V T +++ + G +A++ + G + F +L+
Sbjct: 293 AIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILIN 352
Query: 309 FVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
F+C KG L A ++ ++ C + ++ KE +++ A E +E
Sbjct: 353 FLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLE 403
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 82/194 (42%), Gaps = 6/194 (3%)
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
V N ++ V G L+ L M G D+I TL+ GF G+ A KI E
Sbjct: 103 VESNNHLRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEV 162
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
+ P+V +YN + G + AL ++ M ++PDV T+ +++ + G
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGK 219
Query: 284 LEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL 340
L++A ++ C + + +L+ C + A L C D +
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNV 279
Query: 341 VVDRLAKELRVEEA 354
+V+ + KE R++EA
Sbjct: 280 LVNGICKEGRLDEA 293
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/164 (18%), Positives = 66/164 (40%)
Query: 196 LDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALEL 255
L+ + N L G + K E MV P++ + G +T+KA ++
Sbjct: 100 LEDVESNNHLRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKI 159
Query: 256 VGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKAIFKLLVPFVCEKGD 315
+ + PDV T+ +I G+ G + A ++ + + ++ +C+ G
Sbjct: 160 LEVLEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGK 219
Query: 316 LDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
L A + R C D ++++ ++ V +A +L++
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLD 263
>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 164/348 (47%), Gaps = 10/348 (2%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I + K ++ ++ FK+ G R N Y+ + L + R+ ++L +
Sbjct: 190 TIIDSLCKYRHVDDALNLFKEMETKG-IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 248
Query: 86 YK-DISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
K + + F A LI + K F A K+ D+M R+ + + ++N+L+ + D
Sbjct: 249 KKINPNLVTFNA-LIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
+ +F+ + K PDL +YNT+IK F ++ L EM +G+ D +T+ TL
Sbjct: 308 KAKQMFEFMVSK-DCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 366
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+ G + +G +A+K+++ MV+ V P++ +Y+ LDGL + +KALE+ M+ EI
Sbjct: 367 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 426
Query: 265 NPDVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFN 321
D++ + +I+G G +++ + + G N + ++ +C K L A+
Sbjct: 427 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 486
Query: 322 LCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKTNSYCRY 369
L K+ + L D ++ LR + EL + CR+
Sbjct: 487 LLKKMKEDGPLPDSGTYNTLI---RAHLRDGDKAASAELIREMRSCRF 531
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 111/195 (56%), Gaps = 12/195 (6%)
Query: 101 LYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKL-- 157
L+ KA+ A + D M R C+ ++++ ++ G C K ++D F +L +K+
Sbjct: 127 LHNKAS---EAVALVDRMVQRGCQPNLVTYGVVVNGLC----KRGDIDLAF-NLLNKMEA 178
Query: 158 -GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
IE D+V +NTII + +D A L EME KGIR +++T+++L+ S GR++D
Sbjct: 179 AKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSD 238
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
A ++ M+ + PN+ ++NA +D E + +A +L +M + I+PD+FT+ +LI
Sbjct: 239 ASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLIN 298
Query: 277 GFVNEGNLEEAKRWY 291
GF L++AK+ +
Sbjct: 299 GFCMHDRLDKAKQMF 313
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 105/232 (45%), Gaps = 33/232 (14%)
Query: 126 TVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTL 185
++ FN LL A KKFD V L + + +LGI +L +YN +I F + + A L
Sbjct: 9 SIFEFNKLLSAIAKMKKFDLVISLGEKM-QRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 186 LYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAI 245
L +M K G ++T ++LL G+ R +DA + + MV M RP+ ++ + GL +
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 246 EKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKAIFKL 305
+ +A+ LV M + P++ T+ ++ G
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNG---------------------------- 159
Query: 306 LVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
+C++GD+D AFNL + + + D ++D L K V++A L
Sbjct: 160 ----LCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNL 207
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 141/330 (42%), Gaps = 41/330 (12%)
Query: 67 LANAKRFRWIEEILEHQKQYKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQ 125
+A K+F + + E + Q IS +T LI + + + A + +M E
Sbjct: 20 IAKMKKFDLVISLGE-KMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEP 78
Query: 126 TVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIK------------AF 173
++++ ++LL + K+ + L + ++G PD +++ T+I A
Sbjct: 79 SIVTLSSLLNGYCHGKRISDAVALVDQMV-EMGYRPDTITFTTLIHGLFLHNKASEAVAL 137
Query: 174 VD-----------------------KGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYS 210
VD +G +D A LL +ME I D++ FNT++
Sbjct: 138 VDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCK 197
Query: 211 NGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
DA +++ M +RPNV +Y++ + L + A +L+ +M K+INP++ T
Sbjct: 198 YRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT 257
Query: 271 FYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTF 327
F ALI FV EG EA++ ++ K + + L+ C LD A + +
Sbjct: 258 FNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMV 317
Query: 328 SERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
S+ C D ++ K RVE+ EL
Sbjct: 318 SKDCFPDLDTYNTLIKGFCKSKRVEDGTEL 347
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 86/179 (48%), Gaps = 2/179 (1%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
+NA+KVF +M +++++ LL N+ K ++ +F D K I+ D+ Y T
Sbjct: 377 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVF-DYMQKSEIKLDIYIYTT 435
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
+I+ G +D L + KG++ +++T+NT++ G S +A + + M
Sbjct: 436 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 495
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
P+ +YN + + + EL+ EMRS D T L+ +++G L+++
Sbjct: 496 PLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTI-GLVANMLHDGRLDKS 553
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 142/304 (46%), Gaps = 6/304 (1%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTAR-LIALYGKAAMFENARKVFDEM 118
Y+ + L A ++ E++ + Q K +T L+ GKA F+ A ++ EM
Sbjct: 47 YSCLINSLGRAGKWEAALEVV-AEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEM 105
Query: 119 PGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGS 178
C V ++N L+ + + E LF ++ + G PD +YN++I G
Sbjct: 106 RDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRER-GCVPDTFTYNSLIYGLGKVGR 164
Query: 179 LDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNA 238
A LL EME+ G D++T+++L+ G +G A K+++ M +P+ ++ A
Sbjct: 165 SQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTA 224
Query: 239 RLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSG 295
+D L + ALEL+ EM+ + + P V T+ ALI GF G+L EA + ++G
Sbjct: 225 LMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNG 284
Query: 296 CGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAK 355
C + + L+ + + LD A + K+ E C D +++ L K + +A
Sbjct: 285 CKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAG 344
Query: 356 ELVE 359
L +
Sbjct: 345 RLFD 348
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 132/265 (49%), Gaps = 4/265 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI GKA + +A ++FD M + C V++++ L+ A + + + LF+++ +
Sbjct: 330 LINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEM-ESV 388
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
GI+PDL +Y +II G +D A+ L EM KG+ D+IT+N L GRF +A
Sbjct: 389 GIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEA 448
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
KI+E M + P+V +Y+A L GL+ K+ A L+ E+ + D F ++
Sbjct: 449 RKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEI 508
Query: 278 FVNEGNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
+ GN++EA ++ N G + + L+ + + G + AFN + + D
Sbjct: 509 LTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPD 568
Query: 335 QAPLQLVVDRLAKELRVEEAKELVE 359
++ L + +++ A EL+E
Sbjct: 569 IVSYSSLISALGQTGQIDTAFELLE 593
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 122/239 (51%), Gaps = 5/239 (2%)
Query: 55 TNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKV 114
T + + TG + K F+ +E+ ++ I+ FTA + AL GKA ++A ++
Sbjct: 186 TYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSIT---FTALMDAL-GKAGRVDDALEL 241
Query: 115 FDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFV 174
DEM R + V+++NAL+ E L ++ G +PD+V+Y+ +I +
Sbjct: 242 LDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRN-GCKPDVVTYSCLITGLI 300
Query: 175 DKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVR 234
LD A +L +MEK+G D IT+NTL+ G G DA ++++ M + P+V
Sbjct: 301 KASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVV 360
Query: 235 SYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK 293
+Y+ + L + + A L EM S I PD+FT+ ++I G +++A R +++
Sbjct: 361 TYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSE 419
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 117/236 (49%), Gaps = 4/236 (1%)
Query: 127 VLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLL 186
V+++N+LL A + + +E LF++L PD+VSY+ +I + G ++A ++
Sbjct: 9 VVTYNSLLNALAKAGQCEEAQLLFEEL-KAAKWTPDVVSYSCLINSLGRAGKWEAALEVV 67
Query: 187 YEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIE 246
EM+ KG + +L T+NTL+ G+F +A ++ M + P+VR+YN + L
Sbjct: 68 AEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKA 127
Query: 247 KQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW---YNKSGCGMNKAIF 303
+ +A L EMR + PD FT+ +LI G G ++A + GC + +
Sbjct: 128 GRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTY 187
Query: 304 KLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
L+ + + G+ AF L + D ++D L K RV++A EL++
Sbjct: 188 SSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLD 243
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 110/228 (48%), Gaps = 4/228 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+ KA E A+ +F+E+ V+S++ L+ + + K++ + ++ K
Sbjct: 15 LLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEMQAK- 73
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G +P+L +YNT++ G D A LL EM G D+ T+N L+ GR ++A
Sbjct: 74 GCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEA 133
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ M P+ +YN+ + GL +++KA+EL+ EM PDV T+ +LI G
Sbjct: 134 FTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITG 193
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
+G +A + + + G + F L+ + + G +D A L
Sbjct: 194 LGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALEL 241
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 122/296 (41%), Gaps = 45/296 (15%)
Query: 26 SVIRGIYKE---NNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEH 82
++I G+ K N+ RL D+ K + Y+ + L A R + E
Sbjct: 329 TLINGLGKAGLLNDAGRLFDRMKSKG----CNPDVVTYSTLITALGKAARVESACVLFEE 384
Query: 83 QKQYKDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSK 141
+ I + FT +I + GKA ++A ++F EM G+ V+++NA L +
Sbjct: 385 MESV-GIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGG 443
Query: 142 KFDEVDGLFKDLPHKLGIEPDLVSYNTII----------------KAFVDKG-------- 177
+F E +F+D+ G+ PD+ +Y+ ++ K +++G
Sbjct: 444 RFKEARKIFEDMKES-GLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKF 502
Query: 178 -----------SLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVN 226
++D A+ LL KG+ ++N L+ GR ++A E +
Sbjct: 503 DECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKE 562
Query: 227 MNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEG 282
+P++ SY++ + L Q A EL+ EM + + ++ L++ + G
Sbjct: 563 QGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLVRKLQDWG 618
>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
Length = 609
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 136/263 (51%), Gaps = 7/263 (2%)
Query: 104 KAAMFENARKVFDEM-PGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPD 162
KA + A +V EM G++ +++++ ++ + D + +++ + G+ PD
Sbjct: 21 KARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGMAPD 80
Query: 163 LVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWE 222
+V+Y +++ G +D A ++ EM+ KG+ D TF+ L+ G+ + + +A K+++
Sbjct: 81 VVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYK 140
Query: 223 TMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE---INPDVFTFYALIKGFV 279
++ + R + S +A + GL E++ +A EL EM +E PDV T+ ALI GF
Sbjct: 141 EILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFC 200
Query: 280 NEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQA 336
GNLE+A + C N + L+ +C+ GDLD A +L +R S+ C+ +
Sbjct: 201 KSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVV 260
Query: 337 PLQLVVDRLAKELRVEEAKELVE 359
++ L +V+ A+ L++
Sbjct: 261 TYTTLIHGLCAAHKVDAARLLMD 283
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/374 (20%), Positives = 157/374 (41%), Gaps = 42/374 (11%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
S++ G+ K +L + +D F++ + G N YT + L A + +++
Sbjct: 229 SLLHGLCKAGDLDQALDLFRRMTSKGCV-PNVVTYTTLIHGLCAAHKVDAARLLMDEMTA 287
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
+ L+ Y + E A+++F EM ++C +++ L+ N+ + +E
Sbjct: 288 TCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEE 347
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
L +++ GI+PD+V+Y+ ++ + A + EM + + + +T+++L+
Sbjct: 348 ARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLI 407
Query: 206 LGFYSNGRFADAEKIW-------------------------------ETMVNMNVRPNVR 234
G GR A ++ E MVN V P+V
Sbjct: 408 DGLCKAGRVNHAMEVLKNVDKPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVG 467
Query: 235 SYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA------- 287
++N+ + L +A +L+ M + + P + T+ L++GF G +E A
Sbjct: 468 TFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVM 527
Query: 288 KRWYNKSGCGMN---KAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDR 344
+R KS N + F L+ +C+ ++D A + + S C + +VD
Sbjct: 528 RRKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDG 587
Query: 345 LAKELRVEEAKELV 358
L + R EEA +L+
Sbjct: 588 LLRAGRTEEAGKLI 601
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 148/353 (41%), Gaps = 38/353 (10%)
Query: 18 ATGPKFI--GSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLA-NAKRFR 74
+ P + +VI G K+ + R + ++ + YT V L + K R
Sbjct: 40 SVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDR 99
Query: 75 WIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL 134
E + E + + + K F+A LI + A + A K++ E+ +C +S +AL+
Sbjct: 100 ACEMVREMKLKGVEPDKFTFSA-LITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALI 158
Query: 135 GACVNSKKFDEVDGLFKDLPHKL--GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKK 192
++ E LF+++ + +PD+V+Y +I F G+L+ A +L ME +
Sbjct: 159 TGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGR 218
Query: 193 GIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKA 252
+++T+++LL G G A ++ M + PNV +Y + GL + A
Sbjct: 219 KCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAA 278
Query: 253 LELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKAIFKLLVPFVCE 312
L+ EM + D ++ AL+ G+ G +EEAK+ +
Sbjct: 279 RLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLF--------------------- 317
Query: 313 KGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKTNS 365
K ++ CL D+ +V R+EEA+ L+E KT +
Sbjct: 318 -----------KEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAA 359
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 121/273 (44%), Gaps = 42/273 (15%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFT-ARLIALYGKAAMFENARKVFDEM 118
YT V+ NA R +LE+ K I + T + ++A Y +A F A + EM
Sbjct: 332 YTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEM 391
Query: 119 PGRNCEQTVLSFNALL-GAC------------------------------VNSKKFDEVD 147
RN +++++L+ G C + + +E
Sbjct: 392 IARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDKPDVVTYTIVIEGLCGTDRTEEAL 451
Query: 148 GLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLG 207
L +++ +K +EP + ++N++I A G +D A LL M G+ ++T+ TLL G
Sbjct: 452 TLLEEMVNKR-VEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEG 510
Query: 208 FYSNGRFADAEKIWETM--------VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
F GR A +++E M N+ P ++++A + GL ++ KA+ +V E+
Sbjct: 511 FSRTGRMEIAYELFEVMRRKAKKSSSAANLVPE-QAFSALIRGLCKAREIDKAMAVVEEL 569
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN 292
RS+E P A++ G + G EEA + N
Sbjct: 570 RSRECEPAEEDCLAIVDGLLRAGRTEEAGKLIN 602
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 5/101 (4%)
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMR-SKEINPDVFTFYALIKGFVNEGNLEEA 287
V PN R+YN ++GL + T KA E++ EMR K + PD+ T+ +I GF +G ++ A
Sbjct: 5 VAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRA 64
Query: 288 ----KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCK 324
+ + G + + +V +C G +D A + +
Sbjct: 65 CEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVR 105
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 148/293 (50%), Gaps = 7/293 (2%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I G+ K ++ ++ FK+ G R N Y+ + L N R+ +L +
Sbjct: 875 TIIDGLCKYKHMDDALNLFKEMETKG-IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE 933
Query: 86 YKDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
K I+ + FT + LI + K A K++DEM R+ + +++++++L+ + D
Sbjct: 934 RK-INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD 992
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
E +F+ + K PD+V+YNT+IK F ++ + EM ++G+ + +T+N L
Sbjct: 993 EAKQMFEFMVSKHCF-PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 1051
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+ G + G A++I++ MV+ V PN+ +YN LDGL + +KA+ + ++ ++
Sbjct: 1052 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 1111
Query: 265 NPDVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKG 314
P ++T+ +I+G G +E+ + + G + + ++ C KG
Sbjct: 1112 EPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKG 1164
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 126/252 (50%), Gaps = 3/252 (1%)
Query: 38 KRLVDKFKKSSDLGR--FRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFT 95
KR+ D F ++ R R N YT V L N+ R+ +L + K
Sbjct: 307 KRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITY 366
Query: 96 ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPH 155
+ L+ + K A+++F+EM + + ++++++L+ + DE + +F DL
Sbjct: 367 SALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMF-DLMV 425
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
G D+VSYNT+I F ++ L EM ++G+ + +T+NTL+ GF+ G
Sbjct: 426 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVD 485
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
A++ + M + P++ +YN L GL + +KAL + +M+ +E++ D+ T+ +I
Sbjct: 486 KAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVI 545
Query: 276 KGFVNEGNLEEA 287
+G G +EEA
Sbjct: 546 RGMCKTGKVEEA 557
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 129/283 (45%), Gaps = 8/283 (2%)
Query: 96 ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPH 155
+ L+ Y + A + D+M + ++FN L+ K E L +
Sbjct: 769 SSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVA 828
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
K G +PDLV+Y ++ +G D A LL +ME+ + ++ +NT++ G
Sbjct: 829 K-GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMD 887
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
DA +++ M +RPNV +Y++ + L + A L+ +M ++INPDVFTF ALI
Sbjct: 888 DALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALI 947
Query: 276 KGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCL 332
FV EG L EA++ Y+ K + + L+ C LD A + + S+ C
Sbjct: 948 DAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF 1007
Query: 333 VDQAPLQLVVDRLAKELRVEEA----KELVELGKTNSYCRYNL 371
D ++ K RVEE +E+ + G + YN+
Sbjct: 1008 PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 1050
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/352 (21%), Positives = 156/352 (44%), Gaps = 48/352 (13%)
Query: 24 IGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQ 83
IGS++ G + N + V K ++G ++ + Y + L KR
Sbjct: 261 IGSLVNGFCRRNRVSDAVSLVDKMVEIG-YKPDIVAYNAIIDSLCKTKRV---------- 309
Query: 84 KQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKF 143
+A F E+ + V+++ AL+ NS ++
Sbjct: 310 -------------------------NDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 344
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT 203
+ L D+ K I P++++Y+ ++ AFV G + A L EM + I D++T+++
Sbjct: 345 SDAARLLSDMIKK-KITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSS 403
Query: 204 LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
L+ G + R +A ++++ MV+ +V SYN ++G K+ + ++L EM +
Sbjct: 404 LINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRG 463
Query: 264 INPDVFTFYALIKGFVNEGNLEEAKRWYNKS---GCGMNKAIFKLLVPFVCEKGDLDFAF 320
+ + T+ LI+GF G++++A+ ++++ G + + +L+ +C+ G+L+ A
Sbjct: 464 LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKAL 523
Query: 321 NLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKTNSYCRYNLK 372
+ + +D V+ + K +VEEA L +C +LK
Sbjct: 524 VIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSL--------FCSLSLK 567
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 94/186 (50%), Gaps = 1/186 (0%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
+ A ++FD M + C V+S+N L+ +K+ ++ LF+++ + G+ + V+YN
Sbjct: 414 IDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQR-GLVSNTVTYN 472
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
T+I+ F G +D A +M+ GI D+ T+N LL G NG A I+E M
Sbjct: 473 TLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKR 532
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+ ++ +Y + G+ + ++A L + K + PD+ T+ ++ G +G L E
Sbjct: 533 EMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEV 592
Query: 288 KRWYNK 293
+ Y K
Sbjct: 593 EALYTK 598
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 92/182 (50%), Gaps = 1/182 (0%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
+A +F +M +++ FN LL A V KK+D V L K + LGI DL ++N
Sbjct: 169 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKM-EVLGIRNDLYTFN 227
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
+I F + A ++L +M K G D +T +L+ GF R +DA + + MV +
Sbjct: 228 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 287
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+P++ +YNA +D L K+ A + E+ K I P+V T+ AL+ G N +A
Sbjct: 288 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 347
Query: 288 KR 289
R
Sbjct: 348 AR 349
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 107/220 (48%), Gaps = 4/220 (1%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
++A +F EM +++ F+ LL A KFD V L + + LGI + +Y+
Sbjct: 676 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQM-QNLGIPHNHYTYS 734
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
+I F + L A +L +M K G +++T ++LL G+ + R ++A + + M
Sbjct: 735 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 794
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+PN ++N + GL + + +A+ L+ M +K PD+ T+ ++ G G+ + A
Sbjct: 795 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 854
Query: 288 KRWYNKSGCGMNKA---IFKLLVPFVCEKGDLDFAFNLCK 324
NK G + I+ ++ +C+ +D A NL K
Sbjct: 855 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFK 894
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 102/218 (46%), Gaps = 10/218 (4%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + KA E+ K+F EM R +++N L+ + D+ F +
Sbjct: 439 LINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDF-F 497
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
GI PD+ +YN ++ D G L+ A + +M+K+ + LD++T+ T++ G G+ +A
Sbjct: 498 GISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEA 557
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ ++ ++P++ +Y + GL + + L +M+ + + + T
Sbjct: 558 WSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT------- 610
Query: 278 FVNEGNLEEAKRWYNKS-GCGMNKAIFKLLVPFVCEKG 314
+++G++ + K CG ++ K + VC+K
Sbjct: 611 -LSDGDITLSAELIKKMLSCGYAPSLLKDIKSGVCKKA 647
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 114/252 (45%), Gaps = 8/252 (3%)
Query: 42 DKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTAR---- 97
D+ ++ + F + + V K F + + E + ++++S+ G
Sbjct: 989 DRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTY 1048
Query: 98 --LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPH 155
LI +A + A+++F EM ++++N LL + K ++ +F+ L
Sbjct: 1049 NILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL-Q 1107
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
+ +EP + +YN +I+ G ++ L + KG++ D++ +NT++ GF G
Sbjct: 1108 RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKE 1167
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
+A+ +++ M PN YN + + + + EL+ EMRS D T L+
Sbjct: 1168 EADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI-GLV 1226
Query: 276 KGFVNEGNLEEA 287
+++G L+++
Sbjct: 1227 TNMLHDGRLDKS 1238
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 80/217 (36%), Gaps = 38/217 (17%)
Query: 179 LDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV--------- 229
LD A L EM K +I F+ LL +F + E M N+ +
Sbjct: 676 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 735
Query: 230 --------------------------RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
PN+ + ++ L+G K+ +A+ LV +M
Sbjct: 736 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 795
Query: 264 INPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAF 320
P+ TF LI G EA ++ GC + + ++V +C++GD D AF
Sbjct: 796 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 855
Query: 321 NLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
NL + + ++D L K +++A L
Sbjct: 856 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNL 892
>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 584
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 128/254 (50%), Gaps = 4/254 (1%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
++A KVFDEM R ++++N L+G K +E + + + GI P+L++YNT
Sbjct: 285 KDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSD-GINPNLITYNT 343
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
+I F L A +L +++ +G+ L+T+N L+ GF G + A K+ + M
Sbjct: 344 LIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERG 403
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
++P+ +Y +D A +KA++L M + PDV T+ LI GF +G + EA
Sbjct: 404 IKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEAS 463
Query: 289 RWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRL 345
R + + N+ I+ +V C++G A L + + + A + +++ L
Sbjct: 464 RLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVL 523
Query: 346 AKELRVEEAKELVE 359
KE + +EA+ LVE
Sbjct: 524 CKERKSKEAEGLVE 537
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 96/201 (47%), Gaps = 4/201 (1%)
Query: 127 VLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLL 186
V SF ++ C + + ++ L +L + G P++V Y T+I KG ++ A L
Sbjct: 163 VYSFGIVIKGCCEAGEIEKSFDLLVEL-REFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221
Query: 187 YEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIE 246
+EM K G+ + T+ L+ G + NG +++E M V PN+ +YN ++ L +
Sbjct: 222 FEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKD 281
Query: 247 KQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIF 303
+TK A ++ EMR + ++ ++ T+ LI G E EA ++ G N +
Sbjct: 282 GRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITY 341
Query: 304 KLLVPFVCEKGDLDFAFNLCK 324
L+ C L A +LC+
Sbjct: 342 NTLIDGFCGVRKLGKALSLCR 362
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 84/169 (49%), Gaps = 1/169 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L++ + K A KV EM R + + +++ L+ S ++ L + +L
Sbjct: 379 LVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSM-EEL 437
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ PD+ +Y+ +I F KG ++ A+ L M +K + + +NT++LG+ G A
Sbjct: 438 GLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRA 497
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINP 266
+++ M + PNV SY ++ L E+++K+A LV +M I P
Sbjct: 498 LRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDSGIGP 546
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 92/215 (42%), Gaps = 14/215 (6%)
Query: 166 YNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMV 225
Y II A+V SLDS+ EM KG FN LL + F W
Sbjct: 97 YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQ----WWCFF 152
Query: 226 N---MNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEG 282
N + V +V S+ + G + +K+ +L+ E+R +P+V + LI G +G
Sbjct: 153 NESKIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKG 212
Query: 283 NLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQ 339
+E+AK + K G N+ + +L+ + + G F + ++ +
Sbjct: 213 EIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYN 272
Query: 340 LVVDRLAKELRVEEA----KELVELGKTNSYCRYN 370
V+++L K+ R ++A E+ E G + + YN
Sbjct: 273 CVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYN 307
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 66/136 (48%), Gaps = 3/136 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHK 156
LI + ++ E A ++ M V +++ L+ G C+ + +E LFK + K
Sbjct: 414 LIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGR-MNEASRLFKSMVEK 472
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
EP+ V YNT++ + +GS A L EME+K + ++ ++ ++ + +
Sbjct: 473 -KFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKE 531
Query: 217 AEKIWETMVNMNVRPN 232
AE + E M++ + P+
Sbjct: 532 AEGLVEKMIDSGIGPS 547
>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 132/264 (50%), Gaps = 4/264 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+ + K + + VFD M + + +++N+L+ K+ ++ +F +
Sbjct: 301 LVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQG- 359
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ PD+ SY+ +I F D A L EM +K I D++T+++L+ G +GR + A
Sbjct: 360 GVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYA 419
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ + M + V PN+ +YN+ LD L Q KA+ L+ + + K PD+ T+ LIKG
Sbjct: 420 LQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKG 479
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
G LE+A++ + G ++ + +++ C +G + A L + C+ D
Sbjct: 480 LCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPD 539
Query: 335 QAPLQLVVDRLAKELRVEEAKELV 358
++++ L K+ + A++L+
Sbjct: 540 AKTYEIIILSLFKKDENDMAEKLL 563
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 119/251 (47%), Gaps = 4/251 (1%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A + + G + V+ +N ++ + K +E LF ++ K GI PD+V+Y+ +I
Sbjct: 209 ALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSK-GISPDVVTYSALI 267
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
F G L A L +M + I+ D+ TFN L+ F +G+ + + +++ M+ ++
Sbjct: 268 SGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIK 327
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
PN +YN+ +DG + K+ KA + M +NPD+ ++ +I GF +EA
Sbjct: 328 PNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNL 387
Query: 291 Y---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAK 347
+ ++ + + L+ + + G + +A L + + ++D L K
Sbjct: 388 FKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCK 447
Query: 348 ELRVEEAKELV 358
+V++A L+
Sbjct: 448 THQVDKAIALL 458
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 109/246 (44%), Gaps = 39/246 (15%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
++A +F+ + RN FN +LG+ V SK + V L + + + GI+P+LV+ N
Sbjct: 67 DDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFR-GIKPNLVNCNI 125
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA----------- 217
+I F G + A ++ ++ K G D ITF TL G G+ A
Sbjct: 126 LINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALG 185
Query: 218 ---------------EKIWETMVNMN---------VRPNVRSYNARLDGLAIEKQTKKAL 253
K+ ET ++ V+PNV YN +D + K +A
Sbjct: 186 FHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAF 245
Query: 254 ELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFV 310
+L EM SK I+PDV T+ ALI GF G L++A +NK + F +LV
Sbjct: 246 DLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAF 305
Query: 311 CEKGDL 316
C+ G +
Sbjct: 306 CKDGKM 311
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 92/213 (43%), Gaps = 1/213 (0%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMP 119
Y+ + K+F + + + I + LI K+ A ++ D+M
Sbjct: 368 YSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMH 427
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL 179
R + ++N++L A + + D+ L K G +PD+ +Y+ +IK G L
Sbjct: 428 DRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDK-GFQPDISTYSILIKGLCQSGKL 486
Query: 180 DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNAR 239
+ A + ++ KG LD+ + ++ GF G F +A + M + P+ ++Y
Sbjct: 487 EDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEII 546
Query: 240 LDGLAIEKQTKKALELVGEMRSKEINPDVFTFY 272
+ L + + A +L+ EM ++ + + + Y
Sbjct: 547 ILSLFKKDENDMAEKLLREMIARGLPLNFYDLY 579
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 37/199 (18%), Positives = 81/199 (40%), Gaps = 3/199 (1%)
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
+ +SY++ F +D A +L + ++ FN +L + + +
Sbjct: 49 NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
+ M ++PN+ + N ++ A + ++ PD TF L KG +
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLK 168
Query: 282 GNLEEAKRWYNKS---GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPL 338
G +++A +++K G ++ + L+ +C+ G+ A +L +R +
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMY 228
Query: 339 QLVVDRLAKELRVEEAKEL 357
++D + K V EA +L
Sbjct: 229 NTIIDSMCKVKLVNEAFDL 247
>gi|255580552|ref|XP_002531100.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529296|gb|EEF31265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 483
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 137/303 (45%), Gaps = 39/303 (12%)
Query: 53 FRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENAR 112
FR + Y+ V +LA ++RF +E +L + + + ++ L YGK + A
Sbjct: 76 FRHDYPSYSALVYKLARSRRFEAVETVLGYLQDFNVRCRDTLFIALFEHYGKVGLVAKAI 135
Query: 113 KVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLG-------------- 158
++F+EM G NC +T+ SFNALL V++ + + LF D ++G
Sbjct: 136 RLFNEMTGFNCIRTLQSFNALLNVLVDNDRLFDAKQLF-DRSSEMGFRLNSVPFNILIKG 194
Query: 159 ---------------------IEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLD 197
+EP +V+YN++I G L A L +M KKG R +
Sbjct: 195 WLKKGEWYQAGKVFDEMLERKVEPSVVTYNSLIGYLCRNGELGKAKGLFKDMIKKGKRPN 254
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
+T+ L+ G S G + +A+K+ M +P ++ ++ L + + ++A L+
Sbjct: 255 AVTYALLMEGLCSMGEYKEAKKMLFDMEYRGCKPKNLNFGVLMNDLGKKGKIEEAKLLLL 314
Query: 258 EMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW---YNKSGCGMNKAIFKLLVPFVCEKG 314
EM+ + PDV + LI EG + EA + GC N A +++L C+ G
Sbjct: 315 EMKKRRFRPDVVIYNILINHLCKEGKVAEAYKTLFEMQIGGCEANAATYRMLADGFCQVG 374
Query: 315 DLD 317
+ +
Sbjct: 375 EFE 377
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 123/281 (43%), Gaps = 9/281 (3%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K + A KVFDEM R E +V+++N+L+G + + + GLFKD+ K
Sbjct: 191 LIKGWLKKGEWYQAGKVFDEMLERKVEPSVVTYNSLIGYLCRNGELGKAKGLFKDMIKK- 249
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G P+ V+Y +++ G A +L++ME +G + + F L+ G+ +A
Sbjct: 250 GKRPNAVTYALLMEGLCSMGEYKEAKKMLFDMEYRGCKPKNLNFGVLMNDLGKKGKIEEA 309
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ + M RP+V YN ++ L E + +A + + EM+ + T+ L G
Sbjct: 310 KLLLLEMKKRRFRPDVVIYNILINHLCKEGKVAEAYKTLFEMQIGGCEANAATYRMLADG 369
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
F G EE + N S F V + + G +D AF + + + +D
Sbjct: 370 FCQVGEFEEGLKVLNAMLVSRHAPRIETFNCFVVGLMKSGSIDGAFFVLEEMEKRKMALD 429
Query: 335 QAPLQLVVDRLAKELRVEEAKELVELGKTNSYCRYNLKFPS 375
+ +V E R + L E S R+NL S
Sbjct: 430 SDGWEALVRCCCSEHRGAGSVLLCE-----SLIRHNLVVAS 465
>gi|357138274|ref|XP_003570721.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
mitochondrial-like [Brachypodium distachyon]
Length = 423
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 98/373 (26%), Positives = 173/373 (46%), Gaps = 44/373 (11%)
Query: 4 PSRLLSCSFSTTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGT 63
P+ L+ S + ATGP + ++ L+ L ++ F + I++
Sbjct: 43 PAELVRIKNSIRSAATGPDDLATLF--------LRALPNQ--------AFLGDRPIFSLA 86
Query: 64 VQRLANAKRFRWIEEILEHQKQY--KDISKEGFTARLIALYGKAAMFENARKVFDEMPGR 121
V RLA+A R + IL EGF RLI+LY A M +++ F +
Sbjct: 87 VTRLASAGRRDLVFSILSSSLTALPAPHPSEGFLIRLISLYAAAGMPQHSLSTFRLVK-- 144
Query: 122 NCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDS 181
T F+ALL A ++ + D F+DLP +L +P +VS+N ++K+ V G +
Sbjct: 145 --PATDRVFSALLAAYHDTAQHDLAVTAFRDLPAELSFQPGVVSHNVLLKSMVATGDVAG 202
Query: 182 ANTLLYEM-EKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVN--MNVRPNVRSYNA 238
A + EM +K G++ D+++ N +L G+ +A +++++ + ++PNV +YN
Sbjct: 203 ARQVFDEMADKAGVQPDIVSCNEVLRGYLKTADYAAFDQLFKEIAGGKRRLKPNVTTYNL 262
Query: 239 RLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY------- 291
R+ L + ++ +A EL+ M + + P+ +F +I G EG + A +
Sbjct: 263 RMAALCAKGRSFEAEELLDVMGANGVPPNRESFNTVIGGLCKEGEVGAAAALFKRMPEVP 322
Query: 292 --NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQ--APLQLV---VDR 344
N G N + +L+ + EK A +CK CL ++ P Q V +
Sbjct: 323 RPNGKGVSPNFETYIMLLEALVEKRVFSPALEVCK-----ECLANKWAPPFQAVKGLIQG 377
Query: 345 LAKELRVEEAKEL 357
L K +V++AKEL
Sbjct: 378 LVKSRKVKQAKEL 390
>gi|357494871|ref|XP_003617724.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519059|gb|AET00683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 861
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 115/230 (50%), Gaps = 4/230 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K ++ ++ M C ++ ++ ++ + +K DE +F DL +
Sbjct: 242 LINGFCKQKQYDRVSEILHIMIAMKCNPSIYTYQEIINGLLKRRKNDEAFRVFNDLKDR- 300
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G PD V Y T+IK F D G L A L +EM +KG+ + T+N ++ G+ FA+A
Sbjct: 301 GYFPDRVMYTTVIKGFCDMGLLAEARKLWFEMIQKGLVPNEYTYNVMIYGYCKVRDFAEA 360
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
K+++ M NV SY+ + GL + +T +AL L EM K I D+ ++ +LIKG
Sbjct: 361 RKLYDDMCGRGYAENVVSYSTMISGLYLHGKTDEALSLFHEMSRKGIARDLISYNSLIKG 420
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCK 324
EG L +A NK G + + F L+ +C+ GD + A L K
Sbjct: 421 LCQEGELAKATNLLNKLLIQGLEPSVSSFTPLIKCLCKVGDTEGAMRLLK 470
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 109/249 (43%), Gaps = 23/249 (9%)
Query: 54 RTNTGIYT------GTVQRLANAKRFRWIEEILEHQKQYKDISKEGF------TARLIAL 101
+ N IYT G ++R N + FR + D+ G+ +I
Sbjct: 266 KCNPSIYTYQEIINGLLKRRKNDEAFR----------VFNDLKDRGYFPDRVMYTTVIKG 315
Query: 102 YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEP 161
+ + ARK++ EM + ++N ++ + F E L+ D+ + G
Sbjct: 316 FCDMGLLAEARKLWFEMIQKGLVPNEYTYNVMIYGYCKVRDFAEARKLYDDMCGR-GYAE 374
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
++VSY+T+I G D A +L +EM +KGI DLI++N+L+ G G A A +
Sbjct: 375 NVVSYSTMISGLYLHGKTDEALSLFHEMSRKGIARDLISYNSLIKGLCQEGELAKATNLL 434
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
++ + P+V S+ + L T+ A+ L+ +M + + P T +I G +
Sbjct: 435 NKLLIQGLEPSVSSFTPLIKCLCKVGDTEGAMRLLKDMHDRHLEPIASTHDYMIIGLSKK 494
Query: 282 GNLEEAKRW 290
G+ + W
Sbjct: 495 GDFAQGMEW 503
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 147/320 (45%), Gaps = 16/320 (5%)
Query: 19 TGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEE 78
+ PKF S ++ ++ N L +S G F+ + L +A + +
Sbjct: 62 SNPKFFLSYLK--HQNNTFLSLRFLHWLTSHCG-FKPDQSSCNALFDALVDAGAVKAAKS 118
Query: 79 ILEHQKQY-KDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGAC 137
+LE+ K+ S EG+ + L G+ M E VF + + SFN L AC
Sbjct: 119 LLEYPDFVPKNDSLEGY----VRLLGENGMVEEVFDVFVSLKKVGFLPSASSFNVCLLAC 174
Query: 138 VNSKKFDEVDGLFKDLPHK-LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRL 196
+ + D V L++ + +G+ D+ + +IKAF + + + LL ++ +KG+ +
Sbjct: 175 LKVGRTDLVWKLYELMIESGVGVNIDVETVGCLIKAFCAENKVFNGYELLRQVLEKGLCV 234
Query: 197 DLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELV 256
D FN L+ GF ++ +I M+ M P++ +Y ++GL ++ +A +
Sbjct: 235 DNTVFNALINGFCKQKQYDRVSEILHIMIAMKCNPSIYTYQEIINGLLKRRKNDEAFRVF 294
Query: 257 GEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR-WYN--KSGCGMNKAIFKLLVPFVCEK 313
+++ + PD + +IKGF + G L EA++ W+ + G N+ + +++ C+
Sbjct: 295 NDLKDRGYFPDRVMYTTVIKGFCDMGLLAEARKLWFEMIQKGLVPNEYTYNVMIYGYCKV 354
Query: 314 GDLDFAF----NLCKRTFSE 329
D A ++C R ++E
Sbjct: 355 RDFAEARKLYDDMCGRGYAE 374
>gi|225437600|ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Vitis vinifera]
Length = 867
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 122/228 (53%), Gaps = 4/228 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+A+ G+ ++E AR +F EM R EQ + ++N LL A + D + ++P K
Sbjct: 297 LLAVCGRGGLWEAARNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRK- 355
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
I P++V+Y+T+I + G LD A L EM+ I LD +++NTLL + GRF +A
Sbjct: 356 HIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEA 415
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ + M + ++ + +YNA L G + + ++ + EM+++ I P++ T+ LI
Sbjct: 416 LNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDV 475
Query: 278 FVNEGNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
+ G +EA R + K+G + ++ L+ +C+ G ++ A +
Sbjct: 476 YSKGGLYQEAMEVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSF 523
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 148/309 (47%), Gaps = 13/309 (4%)
Query: 60 YTGTVQRLAN----AKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVF 115
YT ++ L N AK R E + +++ + K + +I++ G+ E A+ VF
Sbjct: 151 YTFLLRELGNRGEWAKAIRCFEFAVRREQRRNEQGK--LASAMISILGRLGQVELAKNVF 208
Query: 116 DEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVD 175
+ TV +F+AL+ A S DE +F+ + G++P+LV+YN +I A
Sbjct: 209 ETALNEGYGNTVYAFSALISAYGRSGYCDEAIKVFETMKSS-GLKPNLVTYNAVIDA-CG 266
Query: 176 KGSLD--SANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNV 233
KG +D A + EM + G++ D ITFN+LL G + A ++ M+ + ++
Sbjct: 267 KGGVDFNRAAEIFDEMLRNGVQPDRITFNSLLAVCGRGGLWEAARNLFSEMLYRGIEQDI 326
Query: 234 RSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK 293
+YN LD + Q A +++ EM K I P+V T+ +I G+ G L+EA +N+
Sbjct: 327 FTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNE 386
Query: 294 ---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELR 350
+ G+++ + L+ + G + A N+CK S D ++ K+ +
Sbjct: 387 MKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGK 446
Query: 351 VEEAKELVE 359
EE K + E
Sbjct: 447 YEEVKRVFE 455
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 94/188 (50%), Gaps = 1/188 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I Y KA + A +F+EM + +S+N LL +F+E + K++
Sbjct: 367 VIDGYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESS- 425
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
GI+ D V+YN ++ + +G + + EM+ + I +L+T++TL+ + G + +A
Sbjct: 426 GIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEA 485
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+++ ++ +V Y+A +D L + A+ + EM + I P+V T+ ++I
Sbjct: 486 MEVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDA 545
Query: 278 FVNEGNLE 285
F G+ E
Sbjct: 546 FGRSGSAE 553
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGA-CVNSKKFDEVDGLFKDLPHK 156
LI +Y K +++ A +VF E + V+ ++AL+ A C N V F D K
Sbjct: 472 LIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYSALIDALCKNGLVESAVS--FLDEMTK 529
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
GI P++V+YN+II AF GS + YE
Sbjct: 530 EGIRPNVVTYNSIIDAFGRSGSAECVIDPPYE 561
>gi|255660916|gb|ACU25627.1| pentatricopeptide repeat-containing protein [Lantana canescens]
Length = 484
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 115/231 (49%), Gaps = 5/231 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I YGKA + + + K+F +M E+T+ S++AL + +F F + +
Sbjct: 86 MIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFKVIMRRGRFMMAKRYFNKMLSE- 144
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
GIEP ++N +I F G +D+AN +M+ + I D++T+NT++ G Y + +A
Sbjct: 145 GIEPTRHTFNVLIWGFFLSGKVDTANRFFEDMKSREISPDVVTYNTMINGCYRVKKMDEA 204
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
EK + M N+ P V SY + G Q AL LV EM+ I P+ T+ L+ G
Sbjct: 205 EKYFVEMKGRNIEPTVVSYTTLIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYSTLLPG 264
Query: 278 FVNEGNLEEA----KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCK 324
+ G + EA K +K + +IF L+ CE G+L A ++ K
Sbjct: 265 LCDAGKMSEAQSILKEMVDKYIAPKDNSIFMRLISSQCEAGNLGAAADVLK 315
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 75/150 (50%), Gaps = 1/150 (0%)
Query: 142 KFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITF 201
K + + D+P K G+E D + +I ++ G + + L +ME+ G+ + ++
Sbjct: 60 KLNHARCILLDMPKK-GLEWDEDMWVLMIDSYGKAGIVQESVKLFQKMEELGVERTIKSY 118
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS 261
+ L GRF A++ + M++ + P ++N + G + + A +M+S
Sbjct: 119 DALFKVIMRRGRFMMAKRYFNKMLSEGIEPTRHTFNVLIWGFFLSGKVDTANRFFEDMKS 178
Query: 262 KEINPDVFTFYALIKGFVNEGNLEEAKRWY 291
+EI+PDV T+ +I G ++EA++++
Sbjct: 179 REISPDVVTYNTMINGCYRVKKMDEAEKYF 208
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/215 (20%), Positives = 92/215 (42%), Gaps = 17/215 (7%)
Query: 37 LKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTA 96
LK +VDK+ D I+ + A ++L+ + ++ G
Sbjct: 278 LKEMVDKYIAPKD-------NSIFMRLISSQCEAGNLGAAADVLKAMIRLSVPTEAGHYG 330
Query: 97 RLIALYGKAAMFENARKVFDEM--------PGRNCEQTVLSFNALLGACVNSKKFDEVDG 148
LI + KA + A K+ D++ P ++N ++ N+ + + +
Sbjct: 331 VLIENFCKAGQHDKAVKLLDKLIEKDIILRPQSTLHMEPSAYNPMIEYLCNNGQTAKAEA 390
Query: 149 LFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
L + L KLG++ D + NT+I+ +GS DSA LL M ++ + + +++L+ +
Sbjct: 391 LVRQLL-KLGVQ-DSTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYDSLVQSY 448
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
ADA+ +M+ + P+ + + ++ L
Sbjct: 449 LKKNEPADAKAALGSMIENDHLPDSSLFRSVMESL 483
>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 114/238 (47%), Gaps = 10/238 (4%)
Query: 79 ILEHQKQYKDISKEGFTARLIA----LYGKAAMFE--NARKVFDEMPGRNCEQTVLSFNA 132
+LE Q K +++ G +I ++G + E ARK+FD M R C+ V S++
Sbjct: 317 VLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSI 376
Query: 133 LLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKK 192
L+ K+ DE LF ++ H+ G+ P+ VSY T+I AF G L A L +M
Sbjct: 377 LINGYCMVKRIDEAKQLFNEMIHQ-GLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTN 435
Query: 193 GIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKA 252
G DL T++ LL GF G A +++ M ++PN+ Y +D + A
Sbjct: 436 GYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHA 495
Query: 253 LELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLV 307
+L E+ + PDV + +I G EG L+EA + K GC N+ + +++
Sbjct: 496 RKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVII 553
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 118/241 (48%), Gaps = 4/241 (1%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A + +M C+ V++++ L+ + + +E +F + K GI P +VSY ++I
Sbjct: 215 AAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAK-GISPTVVSYTSLI 273
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
+ A+ +L EM I D++TF+ L+ F G +A+ + +TM M V
Sbjct: 274 QGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVE 333
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
PNV +YN+ + G +++ + +A +L M ++ PDVF++ LI G+ ++EAK+
Sbjct: 334 PNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQL 393
Query: 291 YNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAK 347
+N+ G N + L+ C+ G L A L K + L D ++++ K
Sbjct: 394 FNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCK 453
Query: 348 E 348
+
Sbjct: 454 Q 454
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 131/299 (43%), Gaps = 39/299 (13%)
Query: 96 ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPH 155
+ LI K + A +F M + TV+S+ +L+ + ++ E + ++
Sbjct: 235 STLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMT- 293
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
L I PD+V+++ +I F +G++ A +L M + G+ ++IT+N+L+ G+
Sbjct: 294 SLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVV 353
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
+A K+++ M+ +P+V SY+ ++G + K+ +A +L EM + + P+ ++ LI
Sbjct: 354 EARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLI 413
Query: 276 KGFVNEGNLEEAKRWYN----------------------KSG----------------CG 297
F G L EA+ + K G
Sbjct: 414 HAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLK 473
Query: 298 MNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKE 356
N ++ +L+ +C+ G+L+ A L F D +++ L KE ++EA E
Sbjct: 474 PNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALE 532
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 113/237 (47%), Gaps = 4/237 (1%)
Query: 124 EQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSAN 183
+ T+++F L+ + +F + LF D+ + G +PD+ +Y TII G +A
Sbjct: 158 QPTIITFTTLINGLCKAGEFAQALELFDDMVAR-GCQPDVYTYTTIINGLCKMGETAAAA 216
Query: 184 TLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
L+ +M + G + D++T++TL+ + +A I+ M + P V SY + + GL
Sbjct: 217 GLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGL 276
Query: 244 AIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK---RWYNKSGCGMNK 300
+ K+A ++ EM S I PD+ TF LI F EGN+ EA+ + + G N
Sbjct: 277 CSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNV 336
Query: 301 AIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
+ L+ + ++ A L + C D ++++ R++EAK+L
Sbjct: 337 ITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQL 393
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 118/271 (43%), Gaps = 9/271 (3%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKF-DEVDGLFKDLPHKLGIEPDLVSY 166
++A F+ M R ++ FN LL A V +++ D V L K + G+ P+ +
Sbjct: 71 IDDALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQM-ELAGLSPNTCTL 129
Query: 167 NTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVN 226
N +I F +D ++L ++ K G++ +ITF TL+ G G FA A ++++ MV
Sbjct: 130 NILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVA 189
Query: 227 MNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEE 286
+P+V +Y ++GL +T A L+ +M PDV T+ LI + + E
Sbjct: 190 RGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNE 249
Query: 287 AK---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVD 343
A + G + L+ +C A + S + D L++D
Sbjct: 250 ALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLID 309
Query: 344 RLAKELRVEEA----KELVELGKTNSYCRYN 370
KE V EA K + E+G + YN
Sbjct: 310 IFCKEGNVLEAQGVLKTMTEMGVEPNVITYN 340
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 89/184 (48%), Gaps = 1/184 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI Y + A+++F+EM + +S+ L+ A K E LFKD+ H
Sbjct: 377 LINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDM-HTN 435
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G PDL +Y+ +++ F +G L A L M+ ++ +L+ + L+ +G A
Sbjct: 436 GYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHA 495
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
K++ + ++P+V+ Y ++GL E +ALE +M P+ F++ +I+G
Sbjct: 496 RKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRG 555
Query: 278 FVNE 281
F+
Sbjct: 556 FLQH 559
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 123/252 (48%), Gaps = 4/252 (1%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A +VF +M + V+++N ++ + + +E ++ + GI PD+V+YNTI+
Sbjct: 220 AVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDR-GIPPDVVTYNTIL 278
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
F G L+ A L EM + + D +TFN L+ G G ++A + ETM
Sbjct: 279 HGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAE 338
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
PN +YNA +DG + Q +A++++G M K P++ ++ LI G+ + EAKR
Sbjct: 339 PNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRL 398
Query: 291 ---YNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAK 347
++ + + L+ +C+ G A NL K S L D +++D K
Sbjct: 399 LSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCK 458
Query: 348 ELRVEEAKELVE 359
++EA +L++
Sbjct: 459 HGHLDEALKLLK 470
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 107/223 (47%), Gaps = 6/223 (2%)
Query: 96 ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPH 155
+ + K + +A + ++M V S N L+ D + +
Sbjct: 100 GKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSHVDFAVSVMGKM-F 158
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
KLGI+PD +++NT+I ++G + A L EM G ++I++NT++ G NG
Sbjct: 159 KLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTI 218
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
A +++ M +PNV +YN +D L ++ +A+E + EM + I PDV T+ ++
Sbjct: 219 MAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTIL 278
Query: 276 KGFVNEGNLEEAKRWYNKSGCGMN----KAIFKLLVPFVCEKG 314
GF + G L EA R + K G N F +LV +C++G
Sbjct: 279 HGFCSLGQLNEATRLF-KEMVGRNVMPDTVTFNILVDGLCKEG 320
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 129/260 (49%), Gaps = 6/260 (2%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEPD 162
K M AR V + M + E ++NAL+ G C++++ DE + + K G P+
Sbjct: 318 KEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQ-MDEAIKVLGIMIGK-GCAPN 375
Query: 163 LVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWE 222
L SYN +I + ++ A LL EM +K + D +T++TL+ G GR +A +++
Sbjct: 376 LSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFK 435
Query: 223 TMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEG 282
M + + P++ +Y+ LDG +AL+L+ EM + I P++ + LI+G G
Sbjct: 436 EMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAG 495
Query: 283 NLEEAKRWYNK-SGCGMNKAI--FKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQ 339
LE AK ++K S G+ I + +++ + ++G D A+ ++ + L D
Sbjct: 496 KLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYN 555
Query: 340 LVVDRLAKELRVEEAKELVE 359
+++ + A +L++
Sbjct: 556 VIIQGFLQNQDSSTAIQLID 575
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 118/264 (44%), Gaps = 4/264 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + + + A V +M + ++FN L+ N K E GLF ++
Sbjct: 137 LINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWS- 195
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G EP+++SYNT+I G+ A + +ME+ + +++T+NT++ + +A
Sbjct: 196 GHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEA 255
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ MV+ + P+V +YN L G Q +A L EM + + PD TF L+ G
Sbjct: 256 VEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDG 315
Query: 278 FVNEGNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
EG + EA+ + G N + L+ C +D A + + C +
Sbjct: 316 LCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPN 375
Query: 335 QAPLQLVVDRLAKELRVEEAKELV 358
+ ++++ K R+ EAK L+
Sbjct: 376 LSSYNILINGYCKSKRMNEAKRLL 399
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 78/165 (47%), Gaps = 1/165 (0%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A +F EM +++++ LL DE L K++ H+ I+P+++ Y +I
Sbjct: 430 ALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEM-HERRIKPNIILYTILI 488
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
+ G L+ A L ++ GIR D+ T+N ++ G G +A + + M +
Sbjct: 489 RGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFL 548
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
P+ SYN + G + + A++L+ EM K + D TF L+
Sbjct: 549 PDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLL 593
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 85/200 (42%), Gaps = 7/200 (3%)
Query: 178 SLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYN 237
S+D A T Y M + R ++ F L +++ A + M V NV S N
Sbjct: 76 SIDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLN 135
Query: 238 ARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---S 294
++ L A+ ++G+M I PD TF LI G NEG ++EA +N+ S
Sbjct: 136 VLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWS 195
Query: 295 GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA 354
G N + ++ +C+ G+ A + ++ R + ++D L K+ V EA
Sbjct: 196 GHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEA 255
Query: 355 ----KELVELGKTNSYCRYN 370
E+V+ G YN
Sbjct: 256 VEFLSEMVDRGIPPDVVTYN 275
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 89/215 (41%), Gaps = 17/215 (7%)
Query: 33 KENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKE 92
+ N KRL+ + + + +T Y+ +Q L R R E +K++
Sbjct: 391 RMNEAKRLLSEMSEKN----LTPDTVTYSTLMQGLCQVGRPR------EALNLFKEMCSS 440
Query: 93 GFTARLIAL------YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEV 146
G L+A + K + A K+ EM R + ++ + L+ + K +
Sbjct: 441 GLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVA 500
Query: 147 DGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLL 206
LF L GI PD+ +YN +IK + +G D A +ME G D ++N ++
Sbjct: 501 KELFSKLSAD-GIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQ 559
Query: 207 GFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLD 241
GF N + A ++ + MV + ++ LD
Sbjct: 560 GFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLLD 594
>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 128/252 (50%), Gaps = 4/252 (1%)
Query: 110 NARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTI 169
+A K+ +M + +V++FN L+ + + +P G +P+ +SYN +
Sbjct: 327 DAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQH-GCQPNSLSYNPL 385
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
+ F + +D A L M +G D++T+NT+L +G+ DA +I + +
Sbjct: 386 LHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGC 445
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
P + +YN +DGLA +T KA++L+ EMR+K++ PD T+ +L+ G EG ++EA +
Sbjct: 446 SPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIK 505
Query: 290 WYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLA 346
+++ + G N F ++ +C+ D A + + C ++ ++++ LA
Sbjct: 506 FFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLA 565
Query: 347 KELRVEEAKELV 358
E +EA EL+
Sbjct: 566 YEGMAKEALELL 577
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 145/324 (44%), Gaps = 13/324 (4%)
Query: 35 NNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGF 94
NN ++D+ S D+ + T ++ L ++ + + E+L+ Q +D +
Sbjct: 189 NNALSVLDRMSVSPDVVTYNT-------ILRSLCDSGKLKQAMEVLDRMLQ-RDCYPDVI 240
Query: 95 T-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
T LI + + +A K+ DEM R C V+++N L+ + DE D+
Sbjct: 241 TYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDM 300
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
P G +P+++++N I+++ G A LL +M +KG ++TFN L+ G
Sbjct: 301 PSS-GCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGL 359
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
A I E M +PN SYN L G EK+ +A+E + M S+ PD+ T+
Sbjct: 360 LGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNT 419
Query: 274 LIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSER 330
++ +G +E+A N+ GC + ++ + + G A L ++
Sbjct: 420 MLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKD 479
Query: 331 CLVDQAPLQLVVDRLAKELRVEEA 354
D +V L++E +V+EA
Sbjct: 480 LKPDTITYSSLVGGLSREGKVDEA 503
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 121/255 (47%), Gaps = 4/255 (1%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
+ A +V D M R+C V+++ L+ A L ++ + G PD+V+YN
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDR-GCTPDVVTYN 278
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
++ +G LD A L +M G + ++IT N +L S GR+ DAEK+ M+
Sbjct: 279 VLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRK 338
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
P+V ++N ++ L + +A++++ +M P+ ++ L+ GF E ++ A
Sbjct: 339 GFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRA 398
Query: 288 KRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDR 344
+ + GC + + ++ +C+ G ++ A + + S+ C V+D
Sbjct: 399 IEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDG 458
Query: 345 LAKELRVEEAKELVE 359
LAK + +A +L++
Sbjct: 459 LAKAGKTGKAIKLLD 473
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 128/307 (41%), Gaps = 47/307 (15%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
++ GI KE RL + K +D+ + T + + RW ++ +K
Sbjct: 280 LVNGICKEG---RLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRW----MDAEKLL 332
Query: 87 KDISKEGFTAR------LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNS 140
D+ ++GF+ LI + + A + ++MP C+ LS+N LL
Sbjct: 333 ADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKE 392
Query: 141 KKFDEV----------------------------DGLFKDLPHKL------GIEPDLVSY 166
KK D DG +D L G P L++Y
Sbjct: 393 KKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITY 452
Query: 167 NTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVN 226
NT+I G A LL EM K ++ D IT+++L+ G G+ +A K +
Sbjct: 453 NTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFER 512
Query: 227 MNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEE 286
M +RPN ++N+ + GL +QT +A++ + M ++ P+ ++ LI+G EG +E
Sbjct: 513 MGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKE 572
Query: 287 AKRWYNK 293
A N+
Sbjct: 573 ALELLNE 579
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 136/291 (46%), Gaps = 13/291 (4%)
Query: 73 FRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNA 132
F+++E ++ H DI LI + + A K+ + + G V+++N
Sbjct: 122 FKFLENMVYH-GNVPDIIP---CTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNV 177
Query: 133 LL-GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEK 191
++ G C K E++ L ++ + PD+V+YNTI+++ D G L A +L M +
Sbjct: 178 MISGYC----KAGEINNALSVL-DRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQ 232
Query: 192 KGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKK 251
+ D+IT+ L+ + A K+ + M + P+V +YN ++G+ E + +
Sbjct: 233 RDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDE 292
Query: 252 ALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVP 308
A++ + +M S P+V T +++ + G +A++ + G + F +L+
Sbjct: 293 AIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILIN 352
Query: 309 FVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
F+C KG L A ++ ++ C + ++ KE +++ A E +E
Sbjct: 353 FLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLE 403
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 82/194 (42%), Gaps = 6/194 (3%)
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
V N ++ V G L+ L M G D+I TL+ GF G+ A KI E
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEI 162
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
+ P+V +YN + G + AL ++ M ++PDV T+ +++ + G
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGK 219
Query: 284 LEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL 340
L++A ++ C + + +L+ C + A L C D +
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNV 279
Query: 341 VVDRLAKELRVEEA 354
+V+ + KE R++EA
Sbjct: 280 LVNGICKEGRLDEA 293
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 31/164 (18%), Positives = 65/164 (39%)
Query: 196 LDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALEL 255
L+ + N L G + K E MV P++ + G +T+KA ++
Sbjct: 100 LEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKI 159
Query: 256 VGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKAIFKLLVPFVCEKGD 315
+ + PDV T+ +I G+ G + A ++ + + ++ +C+ G
Sbjct: 160 LEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGK 219
Query: 316 LDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
L A + R C D ++++ ++ V A +L++
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLD 263
>gi|22128591|gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
Length = 592
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 138/268 (51%), Gaps = 1/268 (0%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
+++RG++ EN +K V FKK N +Y + L + ++L +Q
Sbjct: 147 TLLRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQ 206
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
+ +I + K M + A + +EM ++ + +++ L+ A +++
Sbjct: 207 GSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWEN 266
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
V LF ++ H L I P++ ++N++I +G ++ A ++ M +KG+ D+IT+N ++
Sbjct: 267 VRTLFLEMIH-LNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMII 325
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEIN 265
G+ G+ A +I+++M+N ++ PN+ SYN ++G A +K+ +A+++ E+ K +
Sbjct: 326 DGYGLRGQVDRAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQKGLK 385
Query: 266 PDVFTFYALIKGFVNEGNLEEAKRWYNK 293
P + T L+ G G + A+ ++++
Sbjct: 386 PSIVTCNVLLHGLFELGRTKSAQNFFDE 413
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 161/342 (47%), Gaps = 15/342 (4%)
Query: 25 GSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQK 84
G+V+ G+ K+ + ++ D + G + NT IY+ + +L K
Sbjct: 182 GTVMNGLCKKGHTQKAFDLLRLMEQ-GSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEMK 240
Query: 85 QYKDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKF 143
Q K I + FT + LI K + +EN R +F EM N V +FN+++ K
Sbjct: 241 Q-KSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKV 299
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT 203
++ + + + + K G++PD+++YN II + +G +D A + M K I ++I++N
Sbjct: 300 EDAEEIMRYMIEK-GVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNI 358
Query: 204 LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
L+ G+ + +A ++ + ++P++ + N L GL +TK A EM S
Sbjct: 359 LINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAG 418
Query: 264 INPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAF 320
PD++T L+ G+ G +EEA ++K N I+ ++ +C+ G LD A
Sbjct: 419 HIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKA- 477
Query: 321 NLCKRTFSERCLVDQAP----LQLVVDRLAKELRVEEAKELV 358
TF + L+ P ++ +E ++EAK+++
Sbjct: 478 ---HATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDML 516
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 107/236 (45%), Gaps = 44/236 (18%)
Query: 130 FNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT--------------------- 168
FN LL K + LFK L + EP+ V Y T
Sbjct: 145 FNTLLRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLM 204
Query: 169 --------------IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRF 214
+I AF G LD A +LL EM++K I D+ T++TL+ ++
Sbjct: 205 EQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQW 264
Query: 215 ADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYAL 274
+ ++ M+++N+ PNV ++N+ +DGL E + + A E++ M K ++PDV T+ +
Sbjct: 265 ENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMI 324
Query: 275 IKGFVNEGNLEEAKRWYNKSGCGMNKAI------FKLLVPFVCEKGDLDFAFNLCK 324
I G+ G ++ A+ ++ +NK+I + +L+ + +D A +C+
Sbjct: 325 IDGYGLRGQVDRAREIFDSM---INKSIEPNIISYNILINGYARQKKIDEAMQVCR 377
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 125/284 (44%), Gaps = 15/284 (5%)
Query: 102 YGKAAMFENAR------KVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPH 155
+G + FEN + +F +M +V+SF+ LL A V+ K + V LF+++ H
Sbjct: 41 FGVSNEFENVKCLDDAFSLFRQMVRTKPLPSVVSFSKLLKALVHMKHYSSVVSLFREI-H 99
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
KL I + ++ + D ++L KKGI + + FNTLL G ++ +
Sbjct: 100 KLRIPVHEFILSIVVNSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVK 159
Query: 216 DAEKIWETMVNMNV-RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYAL 274
DA +++ +V N+ PN Y ++GL + T+KA +L+ M P+ + +
Sbjct: 160 DAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIV 219
Query: 275 IKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERC 331
I F +G L+ A N + + + L+ +C+ + L
Sbjct: 220 IDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNI 279
Query: 332 LVDQAPLQLVVDRLAKELRVEEAKE----LVELGKTNSYCRYNL 371
+ V+D L KE +VE+A+E ++E G YN+
Sbjct: 280 YPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNM 323
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 110/271 (40%), Gaps = 38/271 (14%)
Query: 56 NTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIA-LYGKAAMFENARKV 114
N + + L + EEI+ + + K + + T +I YG + AR++
Sbjct: 282 NVCTFNSVIDGLCKEGKVEDAEEIMRYMIE-KGVDPDVITYNMIIDGYGLRGQVDRAREI 340
Query: 115 FDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFV 174
FD M ++ E ++S+N L+ KK DE + +++ K G++P +V+ N ++
Sbjct: 341 FDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQK-GLKPSIVTCNVLLHGLF 399
Query: 175 DKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVR 234
+ G SA EM G DL T TLL G++ NG +A + + N++
Sbjct: 400 ELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQ 459
Query: 235 SYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI------------------- 275
Y A +DGL + KA ++ ++PDV T+ A+I
Sbjct: 460 IYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKM 519
Query: 276 ----------------KGFVNEGNLEEAKRW 290
+GF+ + E K +
Sbjct: 520 EDNGCLADNRTYNVIVRGFLRSNKVSEMKAF 550
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 148/293 (50%), Gaps = 7/293 (2%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I G+ K ++ ++ FK+ G R N Y+ + L N R+ +L +
Sbjct: 261 TIIDGLCKYKHMDDALNLFKEMETKG-IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE 319
Query: 86 YKDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
K I+ + FT + LI + K A K++DEM R+ + +++++++L+ + D
Sbjct: 320 RK-INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD 378
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
E +F+ + K PD+V+YNT+IK F ++ + EM ++G+ + +T+N L
Sbjct: 379 EAKQMFEFMVSKHCF-PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 437
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+ G + G A++I++ MV+ V PN+ +YN LDGL + +KA+ + ++ ++
Sbjct: 438 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 497
Query: 265 NPDVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKG 314
P ++T+ +I+G G +E+ + + G + + ++ C KG
Sbjct: 498 EPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKG 550
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 129/283 (45%), Gaps = 8/283 (2%)
Query: 96 ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPH 155
+ L+ Y + A + D+M + ++FN L+ K E L +
Sbjct: 155 SSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVA 214
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
K G +PDLV+Y ++ +G D A LL +ME+ + ++ +NT++ G
Sbjct: 215 K-GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMD 273
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
DA +++ M +RPNV +Y++ + L + A L+ +M ++INPDVFTF ALI
Sbjct: 274 DALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALI 333
Query: 276 KGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCL 332
FV EG L EA++ Y+ K + + L+ C LD A + + S+ C
Sbjct: 334 DAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF 393
Query: 333 VDQAPLQLVVDRLAKELRVEEA----KELVELGKTNSYCRYNL 371
D ++ K RVEE +E+ + G + YN+
Sbjct: 394 PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 436
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 107/220 (48%), Gaps = 4/220 (1%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
++A +F EM +++ F+ LL A KFD V L + + LGI + +Y+
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQM-QNLGIPHNHYTYS 120
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
+I F + L A +L +M K G +++T ++LL G+ + R ++A + + M
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+PN ++N + GL + + +A+ L+ M +K PD+ T+ ++ G G+ + A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 288 KRWYNKSGCGMNKA---IFKLLVPFVCEKGDLDFAFNLCK 324
NK G + I+ ++ +C+ +D A NL K
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFK 280
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 114/252 (45%), Gaps = 8/252 (3%)
Query: 42 DKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTAR---- 97
D+ ++ + F + + V K F + + E + ++++S+ G
Sbjct: 375 DRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTY 434
Query: 98 --LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPH 155
LI +A + A+++F EM ++++N LL + K ++ +F+ L
Sbjct: 435 NILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL-Q 493
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
+ +EP + +YN +I+ G ++ L + KG++ D++ +NT++ GF G
Sbjct: 494 RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKE 553
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
+A+ +++ M PN YN + + + + EL+ EMRS D T L+
Sbjct: 554 EADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI-GLV 612
Query: 276 KGFVNEGNLEEA 287
+++G L+++
Sbjct: 613 TNMLHDGRLDKS 624
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 80/217 (36%), Gaps = 38/217 (17%)
Query: 179 LDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV--------- 229
LD A L EM K +I F+ LL +F + E M N+ +
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 230 --------------------------RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
PN+ + ++ L+G K+ +A+ LV +M
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 264 INPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAF 320
P+ TF LI G EA ++ GC + + ++V +C++GD D AF
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 321 NLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
NL + + ++D L K +++A L
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNL 278
>gi|224030417|gb|ACN34284.1| unknown [Zea mays]
gi|413950072|gb|AFW82721.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 647
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 147/345 (42%), Gaps = 16/345 (4%)
Query: 16 ATATGPKFIGSVIRGIYKENNLKRLV---DKFKKSSDLGRFRTNTGIYTGTVQRLANAKR 72
A T P+ +I + +EN + +V D +K N Y V+ L R
Sbjct: 123 ARPTEPRLYNHLIDALLRENMVGAVVLVYDNMRKDG----VHPNVFTYNLLVRALCQNNR 178
Query: 73 FRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNA 132
++L+ + + A ++++ K + A +V MP S+NA
Sbjct: 179 VGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMP-----PVAASYNA 233
Query: 133 LLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKK 192
++ A + EV + D+ + G++P++++Y TI+ AF G L A +L M
Sbjct: 234 IVLALCREFRMQEVFSVVSDMVGR-GLQPNVITYTTIVDAFCKAGELRMACAILARMVIT 292
Query: 193 GIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKA 252
G +++TF L+ G + +GR DA +W MV P+ SYN + GL K A
Sbjct: 293 GCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGA 352
Query: 253 LELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPF 309
++ M P+V T+ LI GF G+L A +N +SGC N ++ +V
Sbjct: 353 SSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDV 412
Query: 310 VCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA 354
C+K + A +L + E C + ++ L RV A
Sbjct: 413 FCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRA 457
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 145/320 (45%), Gaps = 17/320 (5%)
Query: 8 LSCSFSTTATATG--PKFIG--SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGT 63
++C+ TG P + +++RG++ + + +D ++ G + +T Y
Sbjct: 281 MACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEG-WAPSTVSYNIL 339
Query: 64 VQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNC 123
++ L + + IL +Q+ + LI + KA A ++++M C
Sbjct: 340 IRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGC 399
Query: 124 EQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIE---PDLVSYNTIIKAFVDKGSLD 180
+ V+ + ++ F++ K L K+ +E P+ V++NT+I++ D +
Sbjct: 400 KPNVVVYTNMVDVFCKKLMFNQA----KSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVG 455
Query: 181 SANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARL 240
A + +EM + G + T+N L+ G + G DA + M + + ++ +YN +
Sbjct: 456 RALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVV 515
Query: 241 DGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW----YNKSGC 296
GL + +++A+ VG+M + I P+ FTF A+I + EG + A W N C
Sbjct: 516 SGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAA-WMLGAMNVVNC 574
Query: 297 GMNKAIFKLLVPFVCEKGDL 316
N ++ +L+ +C + L
Sbjct: 575 HRNILVYTILMAELCNQDKL 594
>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g41170, mitochondrial; Flags: Precursor
gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 527
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 136/266 (51%), Gaps = 7/266 (2%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I + K ++ + F + + G R + +YT V L N+ R+R + +L +
Sbjct: 182 TIIDSLCKNGHVNYALSLFDQMENYG-IRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTK 240
Query: 86 YKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
K I + T LI + K F +A ++++EM + + ++ +L+ D
Sbjct: 241 RK-IKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVD 299
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
E +F + K G PD+V+Y ++I F +D A + YEM +KG+ + IT+ TL
Sbjct: 300 EARQMFYLMETK-GCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTL 358
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+ GF G+ A++++ MV+ V PN+R+YN L L + KKAL + +M+ +E+
Sbjct: 359 IQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREM 418
Query: 265 N---PDVFTFYALIKGFVNEGNLEEA 287
+ P+++T+ L+ G G LE+A
Sbjct: 419 DGVAPNIWTYNVLLHGLCYNGKLEKA 444
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 135/267 (50%), Gaps = 6/267 (2%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIA-LYGKAAMFENARKVFDEM 118
+T + +A K+F + + +H Q +S + +T L+ + +++ A +M
Sbjct: 75 FTKLLNVIAKMKKFDVVINLCDHL-QIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKM 133
Query: 119 PGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGS 178
E +++F +L+ + +E + + ++GI+PD+V Y TII + G
Sbjct: 134 MKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMV-EMGIKPDVVMYTTIIDSLCKNGH 192
Query: 179 LDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNA 238
++ A +L +ME GIR D++ + +L+ G ++GR+ DA+ + M ++P+V ++NA
Sbjct: 193 VNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNA 252
Query: 239 RLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY---NKSG 295
+D E + A EL EM I P++FT+ +LI GF EG ++EA++ + G
Sbjct: 253 LIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKG 312
Query: 296 CGMNKAIFKLLVPFVCEKGDLDFAFNL 322
C + + L+ C+ +D A +
Sbjct: 313 CFPDVVAYTSLINGFCKCKKVDDAMKI 339
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/223 (19%), Positives = 95/223 (42%), Gaps = 4/223 (1%)
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLD 197
++S +F+E LF + + P ++ + ++ D L ++ G+ D
Sbjct: 48 LHSLQFNEALDLFTHMVESRPL-PSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHD 106
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
L T N L+ F + + A M+ + P++ ++ + ++G + + ++A+ +V
Sbjct: 107 LYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVN 166
Query: 258 EMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS---GCGMNKAIFKLLVPFVCEKG 314
+M I PDV + +I G++ A +++ G + ++ LV +C G
Sbjct: 167 QMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSG 226
Query: 315 DLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
A +L + + D ++D KE + +A+EL
Sbjct: 227 RWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEEL 269
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 101/216 (46%), Gaps = 8/216 (3%)
Query: 58 GIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTAR------LIALYGKAAMFENA 111
G + V + F +++ + K + ++S++G T LI +G+ A
Sbjct: 312 GCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVA 371
Query: 112 RKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL--GIEPDLVSYNTI 169
++VF M R + ++N LL + K + +F+D+ + G+ P++ +YN +
Sbjct: 372 QEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVL 431
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
+ G L+ A + +M K+ + + +IT+ ++ G G+ +A ++ ++ + V
Sbjct: 432 LHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGV 491
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEIN 265
+PNV +Y + GL E +A L +M+ ++
Sbjct: 492 KPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/388 (23%), Positives = 168/388 (43%), Gaps = 51/388 (13%)
Query: 25 GSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQK 84
G+++ G+ K + +D +K ++ N IY+ + L R + + +
Sbjct: 223 GTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFT-EM 281
Query: 85 QYKDISKEGFTA-RLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKF 143
Q K I + FT +I + + + +A ++ EM R V+++NAL+ A V KF
Sbjct: 282 QEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKF 341
Query: 144 DEVDGLFKD-LPHKL---------------------------------GIEPDLVSYNTI 169
E + L+ + LP + G P+L+++NT+
Sbjct: 342 FEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTL 401
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
I + +D LL+EM + G+ D T+NTL+ GFY G A + + M++ +
Sbjct: 402 IDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGL 461
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE-----------INPDVFTFYALIKGF 278
P++ + + LDGL + K ALE+ M+ + + PDV T+ LI G
Sbjct: 462 CPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGL 521
Query: 279 VNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQ 335
+NEG EA+ Y + G + + ++ +C++ LD A + S+ +
Sbjct: 522 INEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNV 581
Query: 336 APLQLVVDRLAKELRVEEAKEL-VELGK 362
+++ K RV++ EL E+G+
Sbjct: 582 VTFTTLINGYCKAGRVDDGLELFCEMGR 609
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 108/216 (50%), Gaps = 5/216 (2%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTI 169
A + D M + T +++ ++ G C +D L + + I P++V Y+ I
Sbjct: 203 AVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALD-LLRKMEEISHIIPNVVIYSAI 261
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
I + G A L EM++KGI DL T+N++++GF S+GR++DAE++ + M+ +
Sbjct: 262 IDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKI 321
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
P+V +YNA ++ E + +A EL EM + I P+ T+ ++I GF + L+ A+
Sbjct: 322 SPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEH 381
Query: 290 WY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
+ GC N F L+ C +D L
Sbjct: 382 MFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMEL 417
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 117/273 (42%), Gaps = 13/273 (4%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
S+I G K+N L F + G N + + AKR E+L +
Sbjct: 365 SMIDGFCKQNRLDAAEHMFYLMATKG-CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTE 423
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFD 144
++ LI + A + EM +++ + LL G C N K D
Sbjct: 424 TGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKD 483
Query: 145 EVDGLFK---------DLPHKL-GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGI 194
++ +FK D H G+EPD+ +YN +I +++G A L EM +GI
Sbjct: 484 ALE-MFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI 542
Query: 195 RLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALE 254
D IT+++++ G R +A +++++M + + PNV ++ ++G + LE
Sbjct: 543 VPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLE 602
Query: 255 LVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
L EM + I + T+ LI GF GN+ A
Sbjct: 603 LFCEMGRRGIVANAITYITLICGFRKVGNINGA 635
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 83/175 (47%), Gaps = 1/175 (0%)
Query: 119 PGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGS 178
P E V ++N L+ +N KF E + L++++PH+ GI PD ++Y+++I +
Sbjct: 503 PFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR-GIVPDTITYSSMIDGLCKQSR 561
Query: 179 LDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNA 238
LD A + M K +++TF TL+ G+ GR D +++ M + N +Y
Sbjct: 562 LDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYIT 621
Query: 239 RLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK 293
+ G AL++ EM S + PD T ++ G ++ L+ A K
Sbjct: 622 LICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEK 676
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 101/218 (46%), Gaps = 6/218 (2%)
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT 203
D +D LF D+ + P +V + ++ V D +L +ME+K IR D+ +F
Sbjct: 62 DAID-LFSDMLRSRPL-PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTI 119
Query: 204 LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
L+ F S + A + + + + P+V ++N L GL +E + +AL L +M
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 179
Query: 264 INPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAF 320
P+V TF L+ G EG + EA ++ G + + +V +C+ GD A
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSAL 239
Query: 321 NLCKRTFSERCLVDQAPL-QLVVDRLAKELRVEEAKEL 357
+L ++ ++ + ++D L K+ R +A+ L
Sbjct: 240 DLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNL 277
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 69/157 (43%), Gaps = 5/157 (3%)
Query: 207 GFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKK-ALELVGEMRSKEIN 265
GF+ DA ++ M+ P+V + +L G+ + + + L +M K+I
Sbjct: 53 GFHEIKGLEDAIDLFSDMLRSRPLPSVVDF-CKLMGVVVRMERPDLVISLYQKMERKQIR 111
Query: 266 PDVFTFYALIKGFVNEGNLEEAKRWYNKS---GCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
D+++F LIK F + L A + K G + F L+ +C + + A NL
Sbjct: 112 CDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNL 171
Query: 323 CKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ F C + +++ L +E R+ EA L++
Sbjct: 172 FHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLD 208
>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 556
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 128/257 (49%), Gaps = 4/257 (1%)
Query: 105 AAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLV 164
A +E+A K+ EM + V++FN L+ + + +P K G P+ +
Sbjct: 270 AERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIP-KYGCTPNSL 328
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
SYN I+ AF + +D A + M G D++++NTLL G A ++ +
Sbjct: 329 SYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQL 388
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
+ P + SYN +DGL +T++ALEL+ EM +K + PD+ T+ + G EG +
Sbjct: 389 KDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRI 448
Query: 285 EEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLV 341
EEA + + K G N ++ ++ +C++ A +L S C+ +++ ++
Sbjct: 449 EEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTIL 508
Query: 342 VDRLAKELRVEEAKELV 358
++ LA E V+EA+E++
Sbjct: 509 IEGLAYEGLVKEAREMM 525
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 134/297 (45%), Gaps = 37/297 (12%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEIL-EHQKQ 85
V+ GI +E + ++ K G NT Y ++ L A+R+ E+++ E ++
Sbjct: 228 VVNGICQEGRVDDAMEFLKSLPSYG-CEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRK 286
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
+ + F LI+ + + E A ++ D++P C LS+N +L A KK D
Sbjct: 287 GRPPNVVTFNM-LISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDR 345
Query: 146 V---------DGLFKD----------------------LPHKL---GIEPDLVSYNTIIK 171
G + D L H+L G P L+SYNT+I
Sbjct: 346 AMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVID 405
Query: 172 AFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRP 231
G + A LL EM KG++ D+IT++T+ G GR +A K + + +M +RP
Sbjct: 406 GLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRP 465
Query: 232 NVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
N YNA L GL + T A++L M S P+ T+ LI+G EG ++EA+
Sbjct: 466 NTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAR 522
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 118/265 (44%), Gaps = 7/265 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
++A Y +NAR++ MP E ++N L+ + D + D+ +
Sbjct: 126 MVAGYCVTGQLDNARRLVAAMP---MEPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRR- 181
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G PD+V+Y +++A + A LL EM KG D++T+N ++ G GR DA
Sbjct: 182 GCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDA 241
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ +++ + PN SYN L GL ++ + A +L+ EM K P+V TF LI
Sbjct: 242 MEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISF 301
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
G +E A + K GC N + ++ C++ +D A + S C D
Sbjct: 302 LCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPD 361
Query: 335 QAPLQLVVDRLAKELRVEEAKELVE 359
++ L + V+ A EL+
Sbjct: 362 IVSYNTLLTALCRGGEVDAAVELLH 386
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 126/274 (45%), Gaps = 12/274 (4%)
Query: 90 SKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGL 149
S G A LI + AR+V +CE V+S+NA++ + + D L
Sbjct: 88 SAAGPCAALIKKLCASGRTAEARRVL-----ASCEPDVMSYNAMVAGYCVTGQLDNARRL 142
Query: 150 FKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFY 209
+P +EPD +YNT+I+ +G D+A +L +M ++G D++T+ LL
Sbjct: 143 VAAMP----MEPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATC 198
Query: 210 SNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVF 269
+ A K+ + M + P++ +YN ++G+ E + A+E + + S P+
Sbjct: 199 KRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTV 258
Query: 270 TFYALIKGFVNEGNLEEAKRW---YNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRT 326
++ ++KG E+A++ ++ G N F +L+ F+C +G ++ A + +
Sbjct: 259 SYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQI 318
Query: 327 FSERCLVDQAPLQLVVDRLAKELRVEEAKELVEL 360
C + ++ K+ +++ A VEL
Sbjct: 319 PKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVEL 352
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 92/187 (49%), Gaps = 4/187 (2%)
Query: 78 EILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGAC 137
E++ Y DI + L AL + + A ++ ++ + C ++S+N ++
Sbjct: 351 ELMVSSGCYPDIVS--YNTLLTALC-RGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGL 407
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLD 197
+ K +E L ++ K G++PD+++Y+TI +G ++ A +++ GIR +
Sbjct: 408 TKAGKTEEALELLNEMVTK-GLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPN 466
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
+ +N +LLG A ++ MV+ PN +Y ++GLA E K+A E++
Sbjct: 467 TVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMA 526
Query: 258 EMRSKEI 264
E+ S+ +
Sbjct: 527 ELCSRGV 533
>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580 [Vitis vinifera]
gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 164/349 (46%), Gaps = 7/349 (2%)
Query: 16 ATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRW 75
+ A PK + +V++ Y++N LK L + F F+ Y G +++L F
Sbjct: 2 SPALLPKHVAAVVK--YQKNPLKAL-EIFNSVKKEDGFKHTLLTYKGMIEKLGFHGEFEA 58
Query: 76 IEEILEHQKQYKDISK-EGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL 134
+EE+L + D EG + YG+ + A VF+ M NCE +V S+NA++
Sbjct: 59 MEEVLAETRMNIDNGLLEGVYIGAMRNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIM 118
Query: 135 GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGI 194
V + FD+ ++ + K GI PD+ ++ +K+F +A LL M +G
Sbjct: 119 NILVEYRYFDQAHKVYMRMRDK-GIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGC 177
Query: 195 RLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALE 254
+ + T++ GFY +A +++E M+ + + P++ ++N + L + +++
Sbjct: 178 ESSAVAYCTVIGGFYEENHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESER 237
Query: 255 LVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKAI--FKLLVPFVCE 312
L+ ++ + ++P++FT I+GF L EA R + G G+ + + L+ +C+
Sbjct: 238 LLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDGVGRGLTPDVITYNTLICGLCK 297
Query: 313 KGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELG 361
+ A + ++ +E D ++D K ++ A +++ G
Sbjct: 298 NFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDG 346
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 100/196 (51%), Gaps = 1/196 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+ + + A K+ +EM C + ++N ++ + D L D K
Sbjct: 396 LVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAK- 454
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G PD+ ++NT+I + K LD+A ++ M G+ D+IT+N++L G G++ D
Sbjct: 455 GHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDV 514
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ M+ PN+ +YN + ++ ++AL L+ EM++K + PDV F L+KG
Sbjct: 515 MGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKG 574
Query: 278 FVNEGNLEEAKRWYNK 293
F + G+L+ A + + +
Sbjct: 575 FCDNGDLDGAYQLFKR 590
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 96/188 (51%), Gaps = 2/188 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI Y K +NA ++ D M V+++N++L + K+++V G FK + K
Sbjct: 466 LIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEK- 524
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G P++++YN + ++F ++ A L+ EM+ KG+ D++ F TL+ GF NG A
Sbjct: 525 GCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGA 584
Query: 218 EKIWETM-VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
++++ + + +YN ++ A + A +L +M +PD +T+ +I
Sbjct: 585 YQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMID 644
Query: 277 GFVNEGNL 284
GF GN+
Sbjct: 645 GFCKTGNI 652
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 165/378 (43%), Gaps = 21/378 (5%)
Query: 2 SFPSRLLSCSFSTTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYT 61
+ PS+ C S A T VI G Y+EN+ + F++ LG + +
Sbjct: 171 NMPSQ--GCESSAVAYCT-------VIGGFYEENHRVEAHELFEEMLGLG-ICPDIMAFN 220
Query: 62 GTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARL-IALYGKAAMFENARKVFDEMPG 120
+ L + E +L + + +S FT + I + + AM A ++ D + G
Sbjct: 221 KLIHTLCRKGHVQESERLLNKVLK-RGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDGV-G 278
Query: 121 RNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLD 180
R V+++N L+ + K E + + + ++ G EPD +YN+II + G +
Sbjct: 279 RGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNE-GYEPDGFTYNSIIDGYCKLGMMQ 337
Query: 181 SANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARL 240
+A+ +L + KG D T+ +L+ G +G A ++ + ++PN+ N +
Sbjct: 338 NADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLV 397
Query: 241 DGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS---GCG 297
GL+ + +AL+L+ EM +PD++T+ +I G G + +A + G
Sbjct: 398 KGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHL 457
Query: 298 MNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA--- 354
+ F L+ C+K LD A + R ++ D +++ L K + E+
Sbjct: 458 PDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGT 517
Query: 355 -KELVELGKTNSYCRYNL 371
K ++E G + YN+
Sbjct: 518 FKLMMEKGCVPNIITYNI 535
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 110/235 (46%), Gaps = 5/235 (2%)
Query: 92 EGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLF 150
+GFT +I Y K M +NA ++ + + ++ +L+ D +F
Sbjct: 319 DGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVF 378
Query: 151 KDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYS 210
+ K G++P+LV NT++K +G + A L+ EM + G D+ T+N ++ G
Sbjct: 379 NEAMEK-GLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCK 437
Query: 211 NGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
G +DA+ + + P+V ++N +DG + + A+E+V M + ++PDV T
Sbjct: 438 IGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVIT 497
Query: 271 FYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
+ +++ G G E+ + + GC N + +L C+ ++ A NL
Sbjct: 498 YNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNL 552
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 75/167 (44%)
Query: 102 YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEP 161
+ KA E A + +EM + V++F L+ ++ D LFK + +
Sbjct: 540 FCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSH 599
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
+ +YN +I AF K +++ A L +M + G D T+ ++ GF G
Sbjct: 600 TIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFL 659
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDV 268
+ + P++ ++ L+ L ++++ +A+ ++ M K I P+V
Sbjct: 660 LVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKGIVPEV 706
>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
Length = 333
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 131/265 (49%), Gaps = 4/265 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I + +A + +A +V DEM G C V+++N LL ++ + +GL ++ +
Sbjct: 22 VIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRER- 80
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ PDL ++ T+I + +G LD A L M + +R D++T+NTL+ G G A
Sbjct: 81 GVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKA 140
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+W+ M + + PN +Y+ +D + Q + A + EM +K I P++ T+ ++IKG
Sbjct: 141 NDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKG 200
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
+ GN+ + +++ K + + + L+ ++ + AF L E+ D
Sbjct: 201 YCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPD 260
Query: 335 QAPLQLVVDRLAKELRVEEAKELVE 359
++++ + V+EA + E
Sbjct: 261 VVTYNMLINGFSVHGNVQEAGWIFE 285
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 102/186 (54%), Gaps = 1/186 (0%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
+ A ++D+M R ++++ L+ + + ++ G ++ +K GI P++++YN
Sbjct: 137 LDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINK-GILPNIMTYN 195
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
+IIK + G++ L +M + DLIT+NTL+ G+ + DA K+ M
Sbjct: 196 SIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKE 255
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
V+P+V +YN ++G ++ ++A + +M +K I PD +T+ ++I G V GN +EA
Sbjct: 256 KVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEA 315
Query: 288 KRWYNK 293
+ +++
Sbjct: 316 FQLHDE 321
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 105/206 (50%), Gaps = 3/206 (1%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G PD+V+YNT++ + L A LL EM ++G+ DL TF TL+ G+ G+ A
Sbjct: 46 GCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKA 105
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++++TM+N +RP++ +YN +DG+ + KA +L +M S+EI P+ T+ LI
Sbjct: 106 LQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDS 165
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
+G +E+A + ++ G N + ++ C G++ ++ + D
Sbjct: 166 HCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPD 225
Query: 335 QAPLQLVVDRLAKELRVEEAKELVEL 360
++ KE ++ +A +L+ +
Sbjct: 226 LITYNTLIHGYIKEDKMHDAFKLLNM 251
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 82/166 (49%), Gaps = 3/166 (1%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ PD V Y +I F G + A + EM G D++T+NTLL G R DA
Sbjct: 11 GLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDA 70
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
E + M V P++ ++ + G IE + KAL+L M ++ + PD+ T+ LI G
Sbjct: 71 EGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDG 130
Query: 278 FVNEGNLEEAKRWYNKSGCG---MNKAIFKLLVPFVCEKGDLDFAF 320
+G+L++A ++ N + +L+ CEKG ++ AF
Sbjct: 131 MCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAF 176
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 97/195 (49%), Gaps = 13/195 (6%)
Query: 186 LYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAI 245
L EM G+ D + + ++ GF G +DA ++ + MV P+V +YN L+GL
Sbjct: 4 LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK 63
Query: 246 EKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKAI--- 302
E++ A L+ EMR + + PD+ TF LI G+ EG L++A + ++ +N+ +
Sbjct: 64 ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTM---LNQRLRPD 120
Query: 303 ---FKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA----K 355
+ L+ +C +GDLD A +L S + +++D ++ +VE+A
Sbjct: 121 IVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLD 180
Query: 356 ELVELGKTNSYCRYN 370
E++ G + YN
Sbjct: 181 EMINKGILPNIMTYN 195
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 89/171 (52%), Gaps = 3/171 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHK 156
LI + + E+A DEM + ++++N+++ G C + L K + +K
Sbjct: 162 LIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNK 221
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
+ PDL++YNT+I ++ + + A LL MEK+ ++ D++T+N L+ GF +G +
Sbjct: 222 --VSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQE 279
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPD 267
A I+E M + P+ +Y + ++G +K+A +L EM + PD
Sbjct: 280 AGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 330
>gi|255660864|gb|ACU25601.1| pentatricopeptide repeat-containing protein [Verbena perennis]
Length = 484
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 144/320 (45%), Gaps = 34/320 (10%)
Query: 73 FRWIEE--ILEHQKQYK---------------------DISKEGFT------ARLIALYG 103
FRW+E + EH ++ D+ K+G +I YG
Sbjct: 32 FRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYG 91
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K + + + K+F +M E+T+ S+NAL + ++ F + + GIEP
Sbjct: 92 KEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSE-GIEPTR 150
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
++N +I F G +++AN +M+ + I D++T+NT++ G+Y + +AEK +
Sbjct: 151 HTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVE 210
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M N+ P V +Y + G Q AL LV EM+ I P+ T+ L+ G N
Sbjct: 211 MKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEK 270
Query: 284 LEEA----KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQ 339
+ EA K +K + +IF L+ C+ G+LD A ++ K +
Sbjct: 271 MSEARVILKEMMDKYLAPTDNSIFLRLISSHCKSGNLDAAVDVLKAMIRLSVPTEAGHYG 330
Query: 340 LVVDRLAKELRVEEAKELVE 359
L+++ K + ++A +L++
Sbjct: 331 LLIENFCKAGQYDKAVKLLD 350
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 99/234 (42%), Gaps = 46/234 (19%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I Y + E A K F EM GRN E TV+++ L+ V+ + D+ L +++
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEM-KGF 249
Query: 158 GIEPDLVSYNT----------------IIKAFVDK--------------------GSLDS 181
GI+P+ ++Y+T I+K +DK G+LD+
Sbjct: 250 GIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFLRLISSHCKSGNLDA 309
Query: 182 ANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV--RPNV------ 233
A +L M + + + + L+ F G++ A K+ + ++ ++ RP
Sbjct: 310 AVDVLKAMIRLSVPTEAGHYGLLIENFCKAGQYDKAVKLLDKLIEKDIILRPQSTLHLEP 369
Query: 234 RSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+YN ++ L Q KA LV ++ + D LI+G EG+ + A
Sbjct: 370 SAYNPMIEYLCNNGQASKAETLVRQLMKLGVQ-DPTALNTLIRGHSQEGSPDSA 422
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 77/162 (47%), Gaps = 10/162 (6%)
Query: 90 SKEGFTARLIALYGKAAMFENARKVFDEM--------PGRNCEQTVLSFNALLGACVNSK 141
++ G LI + KA ++ A K+ D++ P ++N ++ N+
Sbjct: 324 TEAGHYGLLIENFCKAGQYDKAVKLLDKLIEKDIILRPQSTLHLEPSAYNPMIEYLCNNG 383
Query: 142 KFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITF 201
+ + + L + L KLG++ D + NT+I+ +GS DSA LL M ++ + + +
Sbjct: 384 QASKAETLVRQL-MKLGVQ-DPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAY 441
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
N+L+ + ADA+ ++M+ + P+ + + ++ L
Sbjct: 442 NSLVQSYLKKNEPADAKAALDSMIENDHLPDSALFRSVMESL 483
Score = 41.6 bits (96), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 99/250 (39%), Gaps = 17/250 (6%)
Query: 39 RLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEIL-EHQKQYKDISKEGFTAR 97
RLV++ K + N Y+ + L NA++ IL E +Y + R
Sbjct: 241 RLVEEMKGFG----IKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFLR 296
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHK- 156
LI+ + K+ + A V M + + L+ + ++D+ L L K
Sbjct: 297 LISSHCKSGNLDAAVDVLKAMIRLSVPTEAGHYGLLIENFCKAGQYDKAVKLLDKLIEKD 356
Query: 157 --------LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
L +EP +YN +I+ + G A TL+ ++ K G++ D NTL+ G
Sbjct: 357 IILRPQSTLHLEPS--AYNPMIEYLCNNGQASKAETLVRQLMKLGVQ-DPTALNTLIRGH 413
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDV 268
G A ++ + M+ V +YN+ + + + A + M + PD
Sbjct: 414 SQEGSPDSAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPADAKAALDSMIENDHLPDS 473
Query: 269 FTFYALIKGF 278
F ++++
Sbjct: 474 ALFRSVMESL 483
>gi|147792816|emb|CAN68810.1| hypothetical protein VITISV_001082 [Vitis vinifera]
Length = 577
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 123/240 (51%), Gaps = 13/240 (5%)
Query: 101 LYGKAAMF----ENARKVFDEMPGRNCEQTVLS---FNALLGACVNSKKFDEVDGLFKDL 153
LY KA +N R + D + E TV+S FN +L +K DE + K +
Sbjct: 92 LYSKACELFRINQNPRAIIDVIEAYRVEGTVVSVKTFNVVLHLLREAKLADEALWILKKM 151
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
+ I D V+YN++I+ F +KG +D A L+ EM + ++IT+ T++ GF + GR
Sbjct: 152 A-EFNIRADTVAYNSVIRLFCEKGDMDLAAGLMKEMGLIDLYPNMITYVTMIKGFCNVGR 210
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM--RSKEINPDVFTF 271
DA K+++ M PNV Y LDG+ ++ALEL+GEM S + +P+V T+
Sbjct: 211 LEDACKLFKVMKGHGCSPNVVVYTVILDGVCRFGSLERALELLGEMEKESGDCSPNVVTY 270
Query: 272 YALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFS 328
++I+ +G L EA ++ GC N+ +L+ C +G ++ AF L + +
Sbjct: 271 TSMIQSCCEKGKLMEALEILDRMRACGCAPNRVTVSILMKGFCAEGRVEEAFKLIDKVVA 330
>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
Length = 816
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 128/275 (46%), Gaps = 21/275 (7%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNAL-LGACVNSK--------KFDEVDGLFKDLP 154
K++ E A +F+EM C S N + LG C SK K DE L K +
Sbjct: 440 KSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMT 499
Query: 155 HKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRF 214
G PD+V+Y+T+I +D A LL +M K+ + ++T NTL+ G GR
Sbjct: 500 DD-GHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRI 558
Query: 215 ADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYAL 274
+A ++ + MV+ P+V +YN + G QT++A EL+ +M ++ + P+V T+ AL
Sbjct: 559 KEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTAL 618
Query: 275 IKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERC 331
+ G L EA + + SGC N + L+ C G +D L F E
Sbjct: 619 VSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKL----FGEMV 674
Query: 332 LVDQAPLQLVVDRLAKEL----RVEEAKELVELGK 362
+P +V LA EL R A E++ G+
Sbjct: 675 CAGISPDHVVYGTLAAELCKSGRSARALEILREGR 709
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 120/273 (43%), Gaps = 13/273 (4%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI KA +AR +F ++ + +++ +L+ + FD+ LF D+ ++
Sbjct: 329 LIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADM-NRR 387
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G P V+YN +I A +G L+ A L+ +M + G D++T+NT++ G + R +A
Sbjct: 388 GCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEA 447
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALE---------LVGEMRSKEINPDV 268
++ M + PN RS+N + GL + + +A + L+ M PDV
Sbjct: 448 LLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDV 507
Query: 269 FTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKR 325
T+ LI G + +++A+ K C L+ +C+ G + A +
Sbjct: 508 VTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDA 567
Query: 326 TFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
S D +V + + E A+EL+
Sbjct: 568 MVSSGQSPDVVTYNTLVHGHCRAGQTERARELL 600
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 120/320 (37%), Gaps = 60/320 (18%)
Query: 92 EGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFK 151
EGF +R + AR++ MP C +S+ +L + + +E LF
Sbjct: 220 EGFCSR--------GQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFG 271
Query: 152 D-----LPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLL 206
D P L YN +I +D A + +M ++ + D ++ L+
Sbjct: 272 DRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILID 331
Query: 207 GFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEIN- 265
G G+ DA +++ +++ V P+ +Y + + GL + A EL +M +
Sbjct: 332 GLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPP 391
Query: 266 ----------------------------------PDVFTFYALIKGFVNEGNLEEAKRWY 291
PDV T+ ++ G +EEA +
Sbjct: 392 SPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLF 451
Query: 292 N---KSGCGMNK-----AIFKLL----VPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQ 339
N + GC N+ I L + C++G LD AF L KR + + D
Sbjct: 452 NEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYS 511
Query: 340 LVVDRLAKELRVEEAKELVE 359
++ L RV++A+ L+E
Sbjct: 512 TLISGLCSIARVDDARHLLE 531
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/348 (20%), Positives = 133/348 (38%), Gaps = 59/348 (16%)
Query: 59 IYTGTVQRLANAKR-------FRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENA 111
++T +Q N R F +EE Y D+ LI K E
Sbjct: 12 LFTSVIQGWCNVGRTFEAVKIFSLMEEC---HSPYPDVYNV-----LIDSLSKRQETEAV 63
Query: 112 RKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKD---------------LPHK 156
+K+ M R C +F +L + K DE + + + L H+
Sbjct: 64 KKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAHE 123
Query: 157 LGIEPDL---------------VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITF 201
L + + +YN ++ A +D A L M +K I L +
Sbjct: 124 LCLRGSMERAFQLLEIMPVANSSAYNIVVVALCKAARVDDALELARTMSEKRIPLAAGSL 183
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVR-PNVRSYNARLDGLAIEKQTKKALELVGEMR 260
+++L+G +GR +A +++ N R P + + N L+G Q KA EL+ M
Sbjct: 184 DSVLVGLMDSGRIDEALQVYRE----NRREPCLVTLNVLLEGFCSRGQVDKARELLRAMP 239
Query: 261 SKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKAI---------FKLLVPFVC 311
+E PD ++ ++ G G +EEA R + + + + +++ +C
Sbjct: 240 DEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLC 299
Query: 312 EKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ +D A + ++ D +++D LAK ++ +A+ L +
Sbjct: 300 QNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQ 347
>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 597
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 164/343 (47%), Gaps = 17/343 (4%)
Query: 25 GSVIRGIYKENN----LKRLVDKFKKSSDLG-RFRTNTGIYTGTVQRLANAKRFRWIEEI 79
G++++G+ + N LK + SS G F+ Y+ + L +R E+
Sbjct: 205 GTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRR----ED- 259
Query: 80 LEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
E + ++++ +G T +I+ + M+E A+++F+EM + + V++FN L+
Sbjct: 260 -EARDLFEEMKVQGMTPTVISY--TSLMWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCK 316
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
K E L + + + GI P+L++YN++I+ F G L+SA L M KG D+I
Sbjct: 317 EGKVIEAKDLLEVMIQR-GIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVI 375
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
+ L+ G+ + +A K++ M+ + RP+V++Y A L GL + A +L G M
Sbjct: 376 CYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVM 435
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDL 316
+ I D++ + + G G L EA +NK ++ F L+ +C+ G L
Sbjct: 436 KVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKL 495
Query: 317 DFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ A+ L ++ E D +++ + +V +A L +
Sbjct: 496 ETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQ 538
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 106/230 (46%), Gaps = 18/230 (7%)
Query: 96 ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPH 155
L++ K + ++++M + N LL N + E + +
Sbjct: 100 THLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILR 159
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
+ G PD+V+Y T+IK + + A L M+K G + IT+ TL+ G G +
Sbjct: 160 R-GYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNIS 218
Query: 216 DAEKIWETMVN------MNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVF 269
A K+ + M+N +N +P V SY+ +D L +++ +A +L EM+ + + P V
Sbjct: 219 IALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVI 278
Query: 270 TFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDL 316
++ +L+ EEAKR +N+ G N F +L+ +C++G +
Sbjct: 279 SYTSLM--------WEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKV 320
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 81/190 (42%), Gaps = 1/190 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI Y K + E A K+++ M V ++ ALL K + LF +
Sbjct: 380 LINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVM-KVY 438
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
GI DL Y + G L A L +++ I+LD+ FN L+ G G+ A
Sbjct: 439 GIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETA 498
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+++E + ++P+V +YN + Q KA L +M PD T+ LI+G
Sbjct: 499 WELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRG 558
Query: 278 FVNEGNLEEA 287
F LE+
Sbjct: 559 FFESKKLEKV 568
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 71/137 (51%), Gaps = 4/137 (2%)
Query: 105 AAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLV 164
+FE A ++F+++ N + + FN L+ + K + LF+ LP + ++PD+V
Sbjct: 458 GCLFE-AMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQE-ELQPDVV 515
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
+YN +I F G + AN L +MEK G D IT+ TL+ GF+ + + ++ M
Sbjct: 516 TYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMM 575
Query: 225 VNMNVR--PNVRSYNAR 239
V +V N+ +N R
Sbjct: 576 VQRDVSLDVNILRHNRR 592
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 77/171 (45%), Gaps = 9/171 (5%)
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
L +F LL G ++ ++ M + P+ + N L+ L + + L ++
Sbjct: 96 LSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMA 155
Query: 258 EMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKG 314
+ + PD+ T+ LIKG E + +A + K GC N + L+ +C G
Sbjct: 156 GILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTG 215
Query: 315 DLDFAFNLCKRTFSERCL--VDQAPL----QLVVDRLAKELRVEEAKELVE 359
++ A L + ++ L ++ P+ +++D L K+ R +EA++L E
Sbjct: 216 NISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFE 266
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 96/238 (40%), Gaps = 40/238 (16%)
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
P L S+ ++ L +M GI D T N LL + R + +
Sbjct: 94 PPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAV 153
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
++ P++ +Y + GL +E + KA L M+ P+ T+ L+KG
Sbjct: 154 MAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCR 213
Query: 281 EGNLEEAKRWY-----NKSGCGMN-KAI---FKLLVPFVCEKGDLDFAFNL--------- 322
GN+ A + + + S G+N K + + +++ +C+ D A +L
Sbjct: 214 TGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGM 273
Query: 323 --------------CKRTFSERCLVDQA------PLQLVVDRLAKELRVEEAKELVEL 360
KR F+E +V+Q +++D L KE +V EAK+L+E+
Sbjct: 274 TPTVISYTSLMWEEAKRLFNE--MVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEV 329
>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
Length = 457
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 154/317 (48%), Gaps = 17/317 (5%)
Query: 53 FRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFT-------ARLIALYGKA 105
+ N Y G ++ L +R+ EE++ IS+ G + + L++ Y KA
Sbjct: 41 IQPNVVSYNGLLEGLCKLERWHEAEELVRDM-----ISRGGRSTPDLVTYSTLLSGYCKA 95
Query: 106 AMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVS 165
E +R++ E+ R L + ++ + S + E L +++ + G P L++
Sbjct: 96 GKVEESRELLKEVISRGLRPDALMYTKVMASLCKSARLGEALELLEEM-IRAGCCPTLIT 154
Query: 166 YNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMV 225
+NT+I + +L+ A++LL M G++ D++T+NTL+ G GR +AE++ E M
Sbjct: 155 FNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMK 214
Query: 226 NMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLE 285
P+V +Y++ + GL + A +++ +MR + +P+V T+ ++ G G ++
Sbjct: 215 ASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKID 274
Query: 286 EA----KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLV 341
A ++ + GCG+N + +V +C+ G A ++ + C D +
Sbjct: 275 TALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSL 334
Query: 342 VDRLAKELRVEEAKELV 358
V+ L K ++EEA E V
Sbjct: 335 VNGLCKAGKIEEAVEAV 351
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 134/303 (44%), Gaps = 21/303 (6%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I G +E NL+ + D ++ + + Y + L A R + E++LE K
Sbjct: 157 TLISGCCREKNLE-MADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMK- 214
Query: 86 YKDISKEGFTARLIA----LYG--KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
G ++A +YG K+ NA +V ++M + + V+++N +L
Sbjct: 215 -----ASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCK 269
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
S K D + + + G ++V Y+T++ G A +++ M + G R D++
Sbjct: 270 SGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVV 329
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
T+++L+ G G+ +A + M +PN +Y + + GL + +A +V EM
Sbjct: 330 TYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEM 389
Query: 260 RSK-----EINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVC 311
S P V T+ ALI G G +++A +++ + GC + + +V +
Sbjct: 390 SSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLA 449
Query: 312 EKG 314
G
Sbjct: 450 RSG 452
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 93/211 (44%), Gaps = 40/211 (18%)
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
M++ G + +TFN L+ GF GR D E++ ETM ++PNV SYN L+GL ++
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60
Query: 249 TKKALELVGEM--RSKEINPDVFTFYALIKGFVNEGNLEEAKR---------------WY 291
+A ELV +M R PD+ T+ L+ G+ G +EE++ Y
Sbjct: 61 WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120
Query: 292 NK-----------------------SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFS 328
K +GC F L+ C + +L+ A +L + +
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180
Query: 329 ERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
D ++D L K R++EA++L+E
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLE 211
>gi|356523400|ref|XP_003530328.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Glycine max]
Length = 664
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 124/233 (53%), Gaps = 7/233 (3%)
Query: 105 AAMFENAR-KVFDEMPGRNCEQTVLSF-NALLGACVNSKKFDEVDGLFKDLPHKLGIEPD 162
AAM E+ R + E+ R + V+S NAL+ + EV GL ++ G++P+
Sbjct: 223 AAMCEDGRVEEAREVARRFGAEGVVSVCNALICGLCREGRVGEVFGLMDEMVGN-GVDPN 281
Query: 163 LVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWE 222
+VSY+++I D G ++ A +L +M ++G R ++ TF++L+ G++ GR + +W
Sbjct: 282 VVSYSSVISWLSDVGEVELALAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRVGEGVGLWR 341
Query: 223 TMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM-RSKEINPDVFTFYALIKGFVNE 281
MV VRPNV YN L+GL +A+++ G M + P+V T+ L+ GFV
Sbjct: 342 VMVLEGVRPNVVVYNTLLNGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKA 401
Query: 282 GNLEEAKRWYNK-SGCGM--NKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERC 331
G+L+ A +NK CG+ N ++ +V +C+ D A+ L ++ C
Sbjct: 402 GDLQGASEVWNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGC 454
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 152/338 (44%), Gaps = 42/338 (12%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
V + +E N+ + F+ ++ F+ Y +++L + IL HQ +
Sbjct: 43 VAHALRREPNVLYALQHFQYLTNTLAFKHTPLTYHVMIEKLGRNSELDALHYIL-HQMKI 101
Query: 87 KDI--SKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACV--NSKK 142
+ I S++ F L + Y + + + A K+F + C+ TV +N LL A + + K
Sbjct: 102 ERIPCSQDSFICVLNS-YKNSGLGDRALKMFYRIKEFGCKPTVKIYNHLLDALLGESGNK 160
Query: 143 FDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITF- 201
F + +++++ + G+EP++ +YN ++KA G LD A LL EM K+G D +++
Sbjct: 161 FHMIGAVYENMRGE-GMEPNVFTYNVLLKALCKNGKLDGACKLLVEMSKRGCVPDGVSYT 219
Query: 202 -------------------------------NTLLLGFYSNGRFADAEKIWETMVNMNVR 230
N L+ G GR + + + MV V
Sbjct: 220 TVVAAMCEDGRVEEAREVARRFGAEGVVSVCNALICGLCREGRVGEVFGLMDEMVGNGVD 279
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK-- 288
PNV SY++ + L+ + + AL ++G+M + P+V TF +L+KG+ G + E
Sbjct: 280 PNVVSYSSVISWLSDVGEVELALAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRVGEGVGL 339
Query: 289 -RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKR 325
R G N ++ L+ +C G+L A ++C R
Sbjct: 340 WRVMVLEGVRPNVVVYNTLLNGLCCSGNLAEAVDVCGR 377
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 123/280 (43%), Gaps = 7/280 (2%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
+++ G+ NL VD + R N Y+ V A + E+
Sbjct: 357 TLLNGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGASEVWNKMVN 416
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFD 144
++ + K +MF+ A ++ D M C TV++FN + G C +
Sbjct: 417 CGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKGLCCGGRVLW 476
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
+ D + G PD +YN ++ L A L+ E+E++ + L+L+T+NT+
Sbjct: 477 AMR--VVDQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIRELEERKVELNLVTYNTV 534
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS-KE 263
+ GF S+G+ ++ M+ V+P+ + N + + + + A++ + + + KE
Sbjct: 535 MYGFSSHGKEEWVLQVLGRMLVNGVKPDAITVNVVIYAYSKLGKVRTAIQFLDRITAGKE 594
Query: 264 INPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKAIF 303
+ PD+ +L+ G N +EEA + NK +NK IF
Sbjct: 595 LCPDIIAHTSLLWGICNSLGIEEAIVYLNKM---LNKGIF 631
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 91/195 (46%), Gaps = 2/195 (1%)
Query: 96 ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPH 155
+ +I+ E A V +M R C V +F++L+ + E GL++ +
Sbjct: 286 SSVISWLSDVGEVELALAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVL 345
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGI-RLDLITFNTLLLGFYSNGRF 214
+ G+ P++V YNT++ G+L A + MEK R ++ T++TL+ GF G
Sbjct: 346 E-GVRPNVVVYNTLLNGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDL 404
Query: 215 ADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYAL 274
A ++W MVN VRPNV Y + +D L +A L+ M + P V TF
Sbjct: 405 QGASEVWNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTF 464
Query: 275 IKGFVNEGNLEEAKR 289
IKG G + A R
Sbjct: 465 IKGLCCGGRVLWAMR 479
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 80/194 (41%), Gaps = 35/194 (18%)
Query: 127 VLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLL 186
V+ +N LL S E + + P++ +Y+T++ FV G L A+ +
Sbjct: 352 VVVYNTLLNGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGASEVW 411
Query: 187 YEMEKKGIRLD-----------------------------------LITFNTLLLGFYSN 211
+M G+R + ++TFNT + G
Sbjct: 412 NKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKGLCCG 471
Query: 212 GRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTF 271
GR A ++ + M P+ R+YN LDGL + K+A EL+ E+ +++ ++ T+
Sbjct: 472 GRVLWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIRELEERKVELNLVTY 531
Query: 272 YALIKGFVNEGNLE 285
++ GF + G E
Sbjct: 532 NTVMYGFSSHGKEE 545
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 103/217 (47%), Gaps = 12/217 (5%)
Query: 150 FKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFY 209
F+ L + L + ++Y+ +I+ LD+ + +L++M+ + I +F +L +
Sbjct: 60 FQYLTNTLAFKHTPLTYHVMIEKLGRNSELDALHYILHQMKIERIPCSQDSFICVLNSYK 119
Query: 210 SNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG----EMRSKEIN 265
++G A K++ + +P V+ YN LD L E K ++G MR + +
Sbjct: 120 NSGLGDRALKMFYRIKEFGCKPTVKIYNHLLDALLGESGNK--FHMIGAVYENMRGEGME 177
Query: 266 PDVFTFYALIKGFVNEGNLEEAKRW---YNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
P+VFT+ L+K G L+ A + +K GC + + +V +CE G ++ A +
Sbjct: 178 PNVFTYNVLLKALCKNGKLDGACKLLVEMSKRGCVPDGVSYTTVVAAMCEDGRVEEAREV 237
Query: 323 CKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+R +E + + ++ L +E RV E L++
Sbjct: 238 ARRFGAEGVV---SVCNALICGLCREGRVGEVFGLMD 271
>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
Length = 609
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 130/252 (51%), Gaps = 4/252 (1%)
Query: 110 NARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTI 169
+A K+ +M + C +V++FN L+ + + +P G P+ +SYN +
Sbjct: 170 DAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMH-GCTPNSLSYNPL 228
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
+ F + +D A L M +G D++T+NTLL +G+ A +I + +
Sbjct: 229 LHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGC 288
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
P + +YN +DGL+ +T++A++L+ EMR K + PD+ T+ +L+ G EG ++EA +
Sbjct: 289 SPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIK 348
Query: 290 WYNK-SGCGM--NKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLA 346
+++ G G+ N + ++ +C+ D A + S+RC +A ++++ +A
Sbjct: 349 FFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIA 408
Query: 347 KELRVEEAKELV 358
E +EA +L+
Sbjct: 409 YEGLAKEALDLL 420
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 98/190 (51%), Gaps = 1/190 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+ + K + A + D M R C ++++N LL A K D + L K
Sbjct: 228 LLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSK- 286
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G P L++YNT+I G + A LL EM +KG++ D+IT+++L+ G G+ +A
Sbjct: 287 GCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEA 346
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
K + + + +RPN +YN+ + GL +QT +A++ + M SK P T+ LI+G
Sbjct: 347 IKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEG 406
Query: 278 FVNEGNLEEA 287
EG +EA
Sbjct: 407 IAYEGLAKEA 416
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 121/278 (43%), Gaps = 5/278 (1%)
Query: 80 LEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
+ Q + S GF+ + K + A K+ DEM + + V+++N L+
Sbjct: 71 INQQTLFPCFSLSGFSF-YVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICK 129
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
+ DE ++P G +P+++++N I+++ G A LL +M +KG ++
Sbjct: 130 EGRLDEAIKFLNNMP-SYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVV 188
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
TFN L+ G A I E M PN SYN L G EK+ +A+E + M
Sbjct: 189 TFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIM 248
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDL 316
S+ PD+ T+ L+ +G ++ A N+ GC + ++ + + G
Sbjct: 249 VSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKT 308
Query: 317 DFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA 354
+ A L + D +V L++E +V+EA
Sbjct: 309 ERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEA 346
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 101/205 (49%), Gaps = 3/205 (1%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G +PD+V+YN +I +G LD A L M G + ++IT N +L S GR+ DA
Sbjct: 112 GSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDA 171
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
EK+ M+ P+V ++N ++ L + +A++++ +M P+ ++ L+ G
Sbjct: 172 EKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHG 231
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
F E ++ A + + GC + + L+ +C+ G +D A + + S+ C
Sbjct: 232 FCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPV 291
Query: 335 QAPLQLVVDRLAKELRVEEAKELVE 359
V+D L+K + E A +L++
Sbjct: 292 LITYNTVIDGLSKVGKTERAIKLLD 316
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 117/239 (48%), Gaps = 8/239 (3%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRF-RWIE--EILEHQ 83
+I + ++ L R +D +K G N+ Y + K+ R IE +I+ +
Sbjct: 193 LINFLCRQGLLGRAIDILEKMPMHG-CTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSR 251
Query: 84 KQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKF 143
Y DI + L AL K + A ++ +++ + C ++++N ++ K
Sbjct: 252 GCYPDIVT--YNTLLTALC-KDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKT 308
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT 203
+ L ++ K G++PD+++Y++++ +G +D A +++E GIR + IT+N+
Sbjct: 309 ERAIKLLDEMRRK-GLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNS 367
Query: 204 LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
++LG + + A M++ +P +Y ++G+A E K+AL+L+ E+ S+
Sbjct: 368 IMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSR 426
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 87/199 (43%), Gaps = 3/199 (1%)
Query: 163 LVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWE 222
L ++ ++ + + A LL EM KG + D++T+N L+ G GR +A K
Sbjct: 82 LSGFSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLN 141
Query: 223 TMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEG 282
M + +PNV ++N L + + A +L+ +M K +P V TF LI +G
Sbjct: 142 NMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQG 201
Query: 283 NLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQ 339
L A K GC N + L+ C++ +D A S C D
Sbjct: 202 LLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYN 261
Query: 340 LVVDRLAKELRVEEAKELV 358
++ L K+ +V+ A E++
Sbjct: 262 TLLTALCKDGKVDVAVEIL 280
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 73/149 (48%), Gaps = 3/149 (2%)
Query: 215 ADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYAL 274
A K+ + M N +P+V +YN ++G+ E + +A++ + M S P+V T +
Sbjct: 99 GQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNII 158
Query: 275 IKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERC 331
++ + G +A++ + + GC + F +L+ F+C +G L A ++ ++ C
Sbjct: 159 LRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGC 218
Query: 332 LVDQAPLQLVVDRLAKELRVEEAKELVEL 360
+ ++ KE +++ A E +++
Sbjct: 219 TPNSLSYNPLLHGFCKEKKMDRAIEYLDI 247
>gi|255660912|gb|ACU25625.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
Length = 481
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 143/320 (44%), Gaps = 34/320 (10%)
Query: 73 FRWIEE--ILEHQKQYK---------------------DISKEGFT------ARLIALYG 103
FRW+E + EH ++ D+ K+G +I YG
Sbjct: 32 FRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYG 91
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K + + + K+FD M E+T+ S++AL + ++ F + + GIEP
Sbjct: 92 KQGIVQESVKLFDRMEELGVERTIKSYDALFKVILRRGRYMMAKRYFNKMLSE-GIEPTR 150
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
++N +I F G +++AN +M+ + I D++T+NT++ G+Y + +AEK +
Sbjct: 151 HTFNVLIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMXEAEKYFVE 210
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M N+ P V +Y + G Q AL LV EM+ I P+ T+ L+ G N
Sbjct: 211 MKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEK 270
Query: 284 LEEA----KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQ 339
+ EA K +K + +IF L+ C+ G LD A ++ K +
Sbjct: 271 MSEARSILKEMMDKYLAPTDNSIFMRLITSQCKSGHLDAASDVLKAMIRLSVPTEAGHYG 330
Query: 340 LVVDRLAKELRVEEAKELVE 359
++++ K + ++A +L++
Sbjct: 331 VLIENFCKAGQYDQAVKLLD 350
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 90/204 (44%), Gaps = 17/204 (8%)
Query: 37 LKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTA 96
LK ++DK+ +D I+ + + ++L+ + ++ G
Sbjct: 278 LKEMMDKYLAPTD-------NSIFMRLITSQCKSGHLDAASDVLKAMIRLSVPTEAGHYG 330
Query: 97 RLIALYGKAAMFENARKVFDEM--------PGRNCEQTVLSFNALLGACVNSKKFDEVDG 148
LI + KA ++ A K+ D++ P ++N ++ N+ + + +
Sbjct: 331 VLIENFCKAGQYDQAVKLLDKVIEKDIILRPQSTLHLEPSAYNPMIEYLCNNGQAAKAET 390
Query: 149 LFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
L + L KLG++ D + NT+I+ +GS DSA LL M ++ + + +++L+ +
Sbjct: 391 LVRQLL-KLGVQ-DPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYDSLVQSY 448
Query: 209 YSNGRFADAEKIWETMVNMNVRPN 232
ADA+ ++M+ + P+
Sbjct: 449 LKKNEPADAKAALDSMIENDHLPD 472
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 111/203 (54%), Gaps = 2/203 (0%)
Query: 87 KDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
K ++ + FT LI + K + A ++F+ M R TV+++ +L+ A + E
Sbjct: 208 KGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQE 267
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
D LF + + GI PDLV YN +I + G++D A ++ EMEKK I D +T+NTL+
Sbjct: 268 TDKLFDEAVRR-GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLM 326
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEIN 265
G GR +A K+ + M ++P++ +YN + G +++ K AL + EM +K N
Sbjct: 327 RGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFN 386
Query: 266 PDVFTFYALIKGFVNEGNLEEAK 288
P + T+ ALI+G G ++A+
Sbjct: 387 PTLLTYNALIQGLCKNGQGDDAE 409
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 101/202 (50%), Gaps = 7/202 (3%)
Query: 86 YKDISKEGFTA------RLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
++++S+ G A LI K + K+FDE R ++ +NAL+ +
Sbjct: 237 FENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHST 296
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
S D + ++ K I PD V+YNT+++ G +D A L+ EM K+GI+ DL+
Sbjct: 297 SGNIDRAFEIMGEMEKKR-IAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLV 355
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
T+NTL+ G+ G DA +I M+N P + +YNA + GL Q A +V EM
Sbjct: 356 TYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEM 415
Query: 260 RSKEINPDVFTFYALIKGFVNE 281
I PD T+ +LI+G E
Sbjct: 416 VENGITPDDSTYISLIEGLTTE 437
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 149/352 (42%), Gaps = 9/352 (2%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
+VI G ++ +D ++ + G N Y + R ++ +
Sbjct: 77 TVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLT 136
Query: 86 YKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
++ E LI Y + A D M R TV ++N L+ A +
Sbjct: 137 KGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGT 196
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
E L +++ K G+ PD+ +YN +I +G++ A + M ++G+R ++T+ +L
Sbjct: 197 EAYELVEEMGGK-GLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSL 255
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+ G+ + +K+++ V +RP++ YNA ++ + +A E++GEM K I
Sbjct: 256 IYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRI 315
Query: 265 NPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAF- 320
PD T+ L++G G ++EA++ + K G + + L+ KGD+ A
Sbjct: 316 APDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALR 375
Query: 321 ---NLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKTNSYCRY 369
+ + F+ L A +Q + + KE+VE G T Y
Sbjct: 376 IRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTY 427
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 105/222 (47%), Gaps = 2/222 (0%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
+I G KE N+K+ ++ F+ S G R YT + L+ + + +++ + +
Sbjct: 220 LINGHCKEGNVKKALEIFENMSRRG-VRATVVTYTSLIYALSKKGQVQETDKLFDEAVRR 278
Query: 87 KDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEV 146
LI + + + A ++ EM + +++N L+ + DE
Sbjct: 279 GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEA 338
Query: 147 DGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLL 206
L ++ K GI+PDLV+YNT+I + KG + A + EM KG L+T+N L+
Sbjct: 339 RKLIDEMT-KRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQ 397
Query: 207 GFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
G NG+ DAE + + MV + P+ +Y + ++GL E +
Sbjct: 398 GLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 439
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 42/196 (21%)
Query: 129 SFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
+FN +L ++ K L + +P P+ V+YNT+I F +G + +A ++ E
Sbjct: 43 TFNIMLRHLCSAGKPARALELLRQMPR-----PNAVTYNTVIAGFCSRGRVQAALDIMRE 97
Query: 189 M-EKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN-VRPNVRSYNARLDG---- 242
M E+ GI + T+ T++ G+ GR +A K+++ M+ V+P YNA + G
Sbjct: 98 MRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQ 157
Query: 243 -------------------------------LAIEKQTKKALELVGEMRSKEINPDVFTF 271
L ++ + +A ELV EM K + PDVFT+
Sbjct: 158 GKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTY 217
Query: 272 YALIKGFVNEGNLEEA 287
LI G EGN+++A
Sbjct: 218 NILINGHCKEGNVKKA 233
>gi|255660906|gb|ACU25622.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
Length = 484
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 143/320 (44%), Gaps = 34/320 (10%)
Query: 73 FRWIEE--ILEHQKQYK---------------------DISKEGFT------ARLIALYG 103
FRW+E + EH ++ DI K+G +I YG
Sbjct: 32 FRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDIPKKGLEWDEDMWVMMIDSYG 91
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K + + + K+F +M E+T+ S+NAL + ++ F + + GIEP
Sbjct: 92 KEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSE-GIEPTR 150
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
++N +I F G +++AN +M+ + I D++T+NT++ G+Y + +AEK +
Sbjct: 151 HTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTIINGYYRVKKMEEAEKYFVE 210
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M N+ P V +Y + G Q AL LV EM+ I P+ T+ L+ G N
Sbjct: 211 MKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEK 270
Query: 284 LEEA----KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQ 339
+ EA K +K + +IF L+ C G+LD A ++ K +
Sbjct: 271 MTEARSILKEMMDKYLAPTDNSIFMRLISSQCNSGNLDAAADVLKAMIRLSVPTEAGHYG 330
Query: 340 LVVDRLAKELRVEEAKELVE 359
++++ K + ++A +L++
Sbjct: 331 VLIENFCKAGQYDQAVKLLD 350
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 99/234 (42%), Gaps = 46/234 (19%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I Y + E A K F EM GRN E TV+++ L+ V+ + D+ L +++
Sbjct: 191 IINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMK-GF 249
Query: 158 GIEPDLVSYNT----------------IIKAFVDK--------------------GSLDS 181
GI+P+ ++Y+T I+K +DK G+LD+
Sbjct: 250 GIKPNAITYSTLLPGLCNAEKMTEARSILKEMMDKYLAPTDNSIFMRLISSQCNSGNLDA 309
Query: 182 ANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV--RPNV------ 233
A +L M + + + + L+ F G++ A K+ + ++ ++ RP
Sbjct: 310 AADVLKAMIRLSVPTEAGHYGVLIENFCKAGQYDQAVKLLDKLIEKDIILRPQSTLHLEP 369
Query: 234 RSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+YN ++ L Q KA LV ++ + D LI+G EG+ + A
Sbjct: 370 SAYNPMIEYLCNNGQAAKAEALVRQLLKLGVQ-DPTALNTLIRGHSQEGSPDSA 422
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 96/215 (44%), Gaps = 17/215 (7%)
Query: 37 LKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTA 96
LK ++DK+ +D I+ + N+ ++L+ + ++ G
Sbjct: 278 LKEMMDKYLAPTD-------NSIFMRLISSQCNSGNLDAAADVLKAMIRLSVPTEAGHYG 330
Query: 97 RLIALYGKAAMFENARKVFDEM--------PGRNCEQTVLSFNALLGACVNSKKFDEVDG 148
LI + KA ++ A K+ D++ P ++N ++ N+ + + +
Sbjct: 331 VLIENFCKAGQYDQAVKLLDKLIEKDIILRPQSTLHLEPSAYNPMIEYLCNNGQAAKAEA 390
Query: 149 LFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
L + L KLG++ D + NT+I+ +GS DSA LL M ++ + + +++L+ +
Sbjct: 391 LVRQLL-KLGVQ-DPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYDSLVQSY 448
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
ADA+ ++M+ + P+ + + ++ L
Sbjct: 449 LKKNEPADAKAALDSMIENDHLPDSSLFRSVMESL 483
>gi|255660868|gb|ACU25603.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
Length = 484
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 144/320 (45%), Gaps = 34/320 (10%)
Query: 73 FRWIEE--ILEHQKQYK---------------------DISKEGFT------ARLIALYG 103
FRW+E + EH ++ D+ K+G +I YG
Sbjct: 32 FRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYG 91
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K + + + K+F +M E+T+ S+NAL + ++ F + + GIEP
Sbjct: 92 KEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSE-GIEPTR 150
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
++N +I F G +++AN +M+ + I D++T+NT++ G+Y + +AEK +
Sbjct: 151 HTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVE 210
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M N+ P V +Y + G Q AL LV EM+ I P+ T+ L+ G N
Sbjct: 211 MKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEK 270
Query: 284 LEEA----KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQ 339
+ EA K +K + +IF L+ C+ G+LD A ++ K +
Sbjct: 271 MSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYG 330
Query: 340 LVVDRLAKELRVEEAKELVE 359
L+++ K + ++A +L++
Sbjct: 331 LLIENFCKAGQYDKAVKLLD 350
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 99/234 (42%), Gaps = 46/234 (19%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I Y + E A K F EM GRN E TV+++ L+ V+ + D+ L +++
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEM-KGF 249
Query: 158 GIEPDLVSYNT----------------IIKAFVDK--------------------GSLDS 181
GI+P+ ++Y+T I+K +DK G+LD+
Sbjct: 250 GIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDA 309
Query: 182 ANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV--RPNV------ 233
A +L M + + + + L+ F G++ A K+ + ++ ++ RP
Sbjct: 310 AADVLKAMIRLSVPTEAGHYGLLIENFCKAGQYDKAVKLLDKLIEKDIILRPQSTLHLEP 369
Query: 234 RSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+YN ++ L Q KA LV ++ + D LI+G EG+ + A
Sbjct: 370 SAYNPMIEYLCNNGQASKAETLVRQLMKLGVQ-DPTALNTLIRGHSQEGSPDSA 422
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 42/215 (19%), Positives = 93/215 (43%), Gaps = 17/215 (7%)
Query: 37 LKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTA 96
LK ++DK+ +D I+ + + ++L+ + ++ G
Sbjct: 278 LKEMMDKYLAPTD-------NSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYG 330
Query: 97 RLIALYGKAAMFENARKVFDEM--------PGRNCEQTVLSFNALLGACVNSKKFDEVDG 148
LI + KA ++ A K+ D++ P ++N ++ N+ + + +
Sbjct: 331 LLIENFCKAGQYDKAVKLLDKLIEKDIILRPQSTLHLEPSAYNPMIEYLCNNGQASKAET 390
Query: 149 LFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
L + L KLG++ D + NT+I+ +GS DSA LL M ++ + + +N L+ +
Sbjct: 391 LVRQL-MKLGVQ-DPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYNLLVQSY 448
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
DA+ ++M+ + P+ + + ++ L
Sbjct: 449 LKKNEPXDAKAALDSMIENDHLPDSALFRSVMESL 483
Score = 41.2 bits (95), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 98/250 (39%), Gaps = 17/250 (6%)
Query: 39 RLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEIL-EHQKQYKDISKEGFTAR 97
RLV++ K + N Y+ + L NA++ IL E +Y + R
Sbjct: 241 RLVEEMKGFG----IKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMR 296
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHK- 156
LI+ + K+ + A V M + + L+ + ++D+ L L K
Sbjct: 297 LISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGLLIENFCKAGQYDKAVKLLDKLIEKD 356
Query: 157 --------LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
L +EP +YN +I+ + G A TL+ ++ K G++ D NTL+ G
Sbjct: 357 IILRPQSTLHLEPS--AYNPMIEYLCNNGQASKAETLVRQLMKLGVQ-DPTALNTLIRGH 413
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDV 268
G A ++ + M+ V +YN + + + A + M + PD
Sbjct: 414 SQEGSPDSAFELLKIMLRRKVDSEKSAYNLLVQSYLKKNEPXDAKAALDSMIENDHLPDS 473
Query: 269 FTFYALIKGF 278
F ++++
Sbjct: 474 ALFRSVMESL 483
>gi|225461712|ref|XP_002283237.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g53330-like [Vitis vinifera]
Length = 464
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 154/318 (48%), Gaps = 7/318 (2%)
Query: 47 SSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDIS-KEGFTARLIALYGKA 105
+ D FR Y + +L ++ F +E+IL ++ S KE +I+ YG+A
Sbjct: 33 NPDPKPFRYTHLSYDLIITKLGRSRMFHEMEQILSQLRRETRFSPKEIIFCNVISFYGRA 92
Query: 106 AMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVS 165
+ + A + F+ +P C++TV S N+LL A + K+F++ DG+ + K PD+ +
Sbjct: 93 RLPDRAIQTFESIPEFRCQRTVKSLNSLLNALLKCKEFEKFDGILSGI-DKFAT-PDVCT 150
Query: 166 YNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMV 225
YN +I A GSL A + EM +K + +++TF TL+ G + R +A ++ E MV
Sbjct: 151 YNVLINACCSSGSLGDAWNVFDEMLRKHVCPNVVTFGTLISGLCGDSRLDEAFRLKEDMV 210
Query: 226 NM-NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
+ NV+PN Y + + GL + A EL EM + ++ D + LI G
Sbjct: 211 KVFNVKPNAFVYASLMKGLCRVNELSLAFELKKEMVANKLRLDSGIYSTLIAALFKVGRK 270
Query: 285 EE---AKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLV 341
+E ++GC + + ++ C + D + A+ + + ++ C D ++
Sbjct: 271 DEVFVVLEEMRENGCKPDTVTYNAMISGFCNEKDFEAAYGVLEEMVAKGCKPDVISYNVI 330
Query: 342 VDRLAKELRVEEAKELVE 359
+ L KE + EA +L E
Sbjct: 331 ISGLCKEGKWREANDLFE 348
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 95/206 (46%), Gaps = 3/206 (1%)
Query: 110 NARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTI 169
+A VFDEM ++ V++F L+ + DE L +D+ ++P+ Y ++
Sbjct: 166 DAWNVFDEMLRKHVCPNVVTFGTLISGLCGDSRLDEAFRLKEDMVKVFNVKPNAFVYASL 225
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
+K L A L EM +RLD ++TL+ + GR + + E M
Sbjct: 226 MKGLCRVNELSLAFELKKEMVANKLRLDSGIYSTLIAALFKVGRKDEVFVVLEEMRENGC 285
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
+P+ +YNA + G EK + A ++ EM +K PDV ++ +I G EG EA
Sbjct: 286 KPDTVTYNAMISGFCNEKDFEAAYGVLEEMVAKGCKPDVISYNVIISGLCKEGKWREAND 345
Query: 290 WYN---KSGCGMNKAIFKLLVPFVCE 312
+ + GC + +++L +CE
Sbjct: 346 LFEDMPRRGCTPDVGSYRILFDGLCE 371
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 93/189 (49%), Gaps = 3/189 (1%)
Query: 130 FNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEM 189
++ L+ A + DEV + +++ + G +PD V+YN +I F ++ ++A +L EM
Sbjct: 257 YSTLIAALFKVGRKDEVFVVLEEM-RENGCKPDTVTYNAMISGFCNEKDFEAAYGVLEEM 315
Query: 190 EKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQT 249
KG + D+I++N ++ G G++ +A ++E M P+V SY DGL Q
Sbjct: 316 VAKGCKPDVISYNVIISGLCKEGKWREANDLFEDMPRRGCTPDVGSYRILFDGLCEGMQF 375
Query: 250 KKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK--SGCGMNKAIFKLLV 307
+A ++ EM K P + ++ EGNLE + N G ++ + L V
Sbjct: 376 NEAAFILDEMVFKGYAPKSASKTKFVEALCQEGNLELLCKVLNSLVKGNVIDGDAWSLAV 435
Query: 308 PFVCEKGDL 316
VC+K L
Sbjct: 436 SKVCKKEKL 444
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 97/231 (41%), Gaps = 16/231 (6%)
Query: 25 GSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQK 84
S+++G+ + N L L + KK + R ++GIY+ + L R + +LE +
Sbjct: 223 ASLMKGLCRVNELS-LAFELKKEMVANKLRLDSGIYSTLIAALFKVGRKDEVFVVLEEMR 281
Query: 85 QYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
+ +I+ + FE A V +EM + C+ V+S+N ++ K+
Sbjct: 282 ENGCKPDTVTYNAMISGFCNEKDFEAAYGVLEEMVAKGCKPDVISYNVIISGLCKEGKWR 341
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
E + LF+D+P + G PD+ SY + + + A +L EM KG +
Sbjct: 342 EANDLFEDMPRR-GCTPDVGSYRILFDGLCEGMQFNEAAFILDEMVFKGYAPKSASKTKF 400
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDG----LAIEKQTKK 251
+ G K+ ++V NV +DG LA+ K KK
Sbjct: 401 VEALCQEGNLELLCKVLNSLVKGNV----------IDGDAWSLAVSKVCKK 441
>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
Length = 561
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 141/320 (44%), Gaps = 9/320 (2%)
Query: 52 RFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENA 111
R N Y + L A + E+L+ + +I KA F +A
Sbjct: 25 RCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDA 84
Query: 112 RKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIK 171
F + G C +++FN L+ A V S + +E +F+ + P++V+Y T+I
Sbjct: 85 LGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVIN 144
Query: 172 AFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRP 231
G LD A LL M + G ++IT++ L+ G GR + + M +P
Sbjct: 145 GLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQP 204
Query: 232 NVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW- 290
+V YN L+GL ++ +ALELV M P V T+ +L++ F ++ A R
Sbjct: 205 DVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLI 264
Query: 291 --YNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKE 348
++ GC + + ++ +C LD A L K+ + RC+ D ++D L K+
Sbjct: 265 QVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKD 324
Query: 349 LRV------EEAKELVELGK 362
RV E A E++E+ K
Sbjct: 325 WRVDADWKLEAACEILEMMK 344
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/361 (22%), Positives = 153/361 (42%), Gaps = 13/361 (3%)
Query: 12 FSTTA-TATGPKFI--GSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLA 68
F T A T P I ++ + K ++ F+ + N YT + L
Sbjct: 88 FKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLC 147
Query: 69 NAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVL 128
+ E+L+ + + L+ KA + + EM R + V+
Sbjct: 148 KDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVI 207
Query: 129 SFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
+N LL S++ DE L + L + G P +V+YN++++ F +D A L+
Sbjct: 208 MYNTLLNGLCKSRRLDEALELVQ-LMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQV 266
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLA---- 244
M ++G D+I +NT++ G + R DA+ + + MV P+V +Y+ +DGL
Sbjct: 267 MSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWR 326
Query: 245 --IEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK---RWYNKSGCGMN 299
+ + + A E++ M+ P+ T+ +I+G ++A R S +
Sbjct: 327 VDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPD 386
Query: 300 KAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ F +++ +C+ DLD A+ + C + ++D L+K V++A + E
Sbjct: 387 LSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFE 446
Query: 360 L 360
L
Sbjct: 447 L 447
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 93/216 (43%), Gaps = 2/216 (0%)
Query: 78 EILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGAC 137
EILE KQ G A +I +A + A + M + SF+ ++G+
Sbjct: 338 EILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSL 397
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLD 197
S D +F + + +P+ V+Y +I G +D A ++E+ + R
Sbjct: 398 CKSHDLDAAYKIFGMMSER-ECKPNPVAYAALIDGLSKGGEVDKA-VRVFELMVESFRPG 455
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
+ T+N++L G GR +A ++ E M++ P+ SY A + GL ++A EL
Sbjct: 456 VATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQ 515
Query: 258 EMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK 293
+ +K +V + L+ + L +A NK
Sbjct: 516 AVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANK 551
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 62/138 (44%), Gaps = 6/138 (4%)
Query: 237 NARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK--- 293
N L+ L Q +A++L R + P+ FT+ +LI G G L++A ++
Sbjct: 2 NCALNLLVRAGQHGQAVQL---FREERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRD 58
Query: 294 SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEE 353
G A+ ++ +C+ G A K +C D ++VD L K RVEE
Sbjct: 59 RGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEE 118
Query: 354 AKELVELGKTNSYCRYNL 371
A ++ E T+S C N+
Sbjct: 119 AFQIFESMHTSSQCLPNV 136
>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform 1 [Vitis vinifera]
Length = 610
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 130/252 (51%), Gaps = 4/252 (1%)
Query: 110 NARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTI 169
+A K+ +M + C +V++FN L+ + + +P G P+ +SYN +
Sbjct: 339 DAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMH-GCTPNSLSYNPL 397
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
+ F + +D A L M +G D++T+NTLL +G+ A +I + +
Sbjct: 398 LHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGC 457
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
P + +YN +DGL+ +T++A++L+ EMR K + PD+ T+ +L+ G EG ++EA +
Sbjct: 458 SPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIK 517
Query: 290 WYNK-SGCGM--NKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLA 346
+++ G G+ N + ++ +C+ D A + S+RC +A ++++ +A
Sbjct: 518 FFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIA 577
Query: 347 KELRVEEAKELV 358
E +EA +L+
Sbjct: 578 YEGLAKEALDLL 589
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 134/298 (44%), Gaps = 14/298 (4%)
Query: 66 RLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQ 125
R+ K+ W+ EILE D+ LI+ Y K+ +NA +V D M N
Sbjct: 161 RIGKTKKATWVMEILEQSGAVPDVITYNV---LISGYCKSGEIDNALQVLDRM---NVAP 214
Query: 126 TVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIE--PDLVSYNTIIKAFVDKGSLDSAN 183
V+++N +L +S K + + L +L E PD+++Y +I+A + + A
Sbjct: 215 DVVTYNTILRTLCDSGKLKQA---MEVLDRQLQKECYPDVITYTILIEATCKESGVGQAM 271
Query: 184 TLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
LL EM KG + D++T+N L+ G GR +A K M + +PNV ++N L +
Sbjct: 272 KLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSM 331
Query: 244 AIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNK 300
+ A +L+ +M K +P V TF LI +G L A K GC N
Sbjct: 332 CSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNS 391
Query: 301 AIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
+ L+ C++ +D A S C D ++ L K+ +V+ A E++
Sbjct: 392 LSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEIL 449
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 100/196 (51%), Gaps = 1/196 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+ + K + A + D M R C ++++N LL A K D + L K
Sbjct: 397 LLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSK- 455
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G P L++YNT+I G + A LL EM +KG++ D+IT+++L+ G G+ +A
Sbjct: 456 GCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEA 515
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
K + + + +RPN +YN+ + GL +QT +A++ + M SK P T+ LI+G
Sbjct: 516 IKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEG 575
Query: 278 FVNEGNLEEAKRWYNK 293
EG +EA N+
Sbjct: 576 IAYEGLAKEALDLLNE 591
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 107/241 (44%), Gaps = 41/241 (17%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G PD+++YN +I + G +D+A L +++ + D++T+NT+L +G+ A
Sbjct: 179 GAVPDVITYNVLISGYCKSGEIDNA---LQVLDRMNVAPDVVTYNTILRTLCDSGKLKQA 235
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ + + P+V +Y ++ E +A++L+ EMR+K PDV T+ LI G
Sbjct: 236 MEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLING 295
Query: 278 FVNEGNLEEA-----------------------------KRWYN---------KSGCGMN 299
EG L+EA RW + + GC +
Sbjct: 296 ICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPS 355
Query: 300 KAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
F +L+ F+C +G L A ++ ++ C + ++ KE +++ A E ++
Sbjct: 356 VVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLD 415
Query: 360 L 360
+
Sbjct: 416 I 416
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 98/201 (48%), Gaps = 6/201 (2%)
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
PD++ ++I+ F G A ++ +E+ G D+IT+N L+ G+ +G +A ++
Sbjct: 147 PDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQV 206
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
+ MNV P+V +YN L L + K+A+E++ KE PDV T+ LI+
Sbjct: 207 LD---RMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCK 263
Query: 281 EGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAP 337
E + +A + ++ G + + +L+ +C++G LD A S C +
Sbjct: 264 ESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVIT 323
Query: 338 LQLVVDRLAKELRVEEAKELV 358
+++ + R +A++L+
Sbjct: 324 HNIILRSMCSTGRWMDAEKLL 344
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 99/191 (51%), Gaps = 6/191 (3%)
Query: 74 RWIE--EILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFN 131
R IE +I+ + Y DI + L AL K + A ++ +++ + C ++++N
Sbjct: 409 RAIEYLDIMVSRGCYPDIVT--YNTLLTALC-KDGKVDVAVEILNQLSSKGCSPVLITYN 465
Query: 132 ALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEK 191
++ K + L ++ K G++PD+++Y++++ +G +D A +++E
Sbjct: 466 TVIDGLSKVGKTERAIKLLDEMRRK-GLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEG 524
Query: 192 KGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKK 251
GIR + IT+N+++LG + + A M++ +P +Y ++G+A E K+
Sbjct: 525 LGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKE 584
Query: 252 ALELVGEMRSK 262
AL+L+ E+ S+
Sbjct: 585 ALDLLNELCSR 595
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 83/188 (44%), Gaps = 6/188 (3%)
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
++ V G L+ L M +G D+I +L+ GF G+ A + E +
Sbjct: 121 LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 180
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
P+V +YN + G + AL+++ M + PDV T+ +++ + G L++A
Sbjct: 181 VPDVITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAME 237
Query: 290 WYNKS---GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLA 346
++ C + + +L+ C++ + A L ++ D ++++ +
Sbjct: 238 VLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGIC 297
Query: 347 KELRVEEA 354
KE R++EA
Sbjct: 298 KEGRLDEA 305
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 66/149 (44%)
Query: 211 NGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
NG D K E+MV P++ + + G +TKKA ++ + PDV T
Sbjct: 127 NGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVIT 186
Query: 271 FYALIKGFVNEGNLEEAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSER 330
+ LI G+ G ++ A + ++ + + ++ +C+ G L A + R +
Sbjct: 187 YNVLISGYCKSGEIDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKE 246
Query: 331 CLVDQAPLQLVVDRLAKELRVEEAKELVE 359
C D ++++ KE V +A +L++
Sbjct: 247 CYPDVITYTILIEATCKESGVGQAMKLLD 275
>gi|296084709|emb|CBI25851.3| unnamed protein product [Vitis vinifera]
Length = 528
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 123/240 (51%), Gaps = 13/240 (5%)
Query: 101 LYGKAAMF----ENARKVFDEMPGRNCEQTVLS---FNALLGACVNSKKFDEVDGLFKDL 153
LY KA +N R + D + E TV+S FN +L +K DE + K +
Sbjct: 98 LYSKACELFRINQNPRAIIDVIEAYRVEGTVVSVKTFNVVLHLLREAKLADEALWILKKM 157
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
+ I D V+YN++I+ F +KG +D A L+ EM + ++IT+ T++ GF + GR
Sbjct: 158 A-EFNIRADTVAYNSVIRLFCEKGDMDLAAGLMKEMGLIDLYPNMITYVTMIKGFCNVGR 216
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM--RSKEINPDVFTF 271
DA K+++ M PNV Y LDG+ ++ALEL+GEM S + +P+V T+
Sbjct: 217 LEDACKLFKVMKGHGCSPNVVVYTVILDGVCRFGSLERALELLGEMEKESGDCSPNVVTY 276
Query: 272 YALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFS 328
++I+ +G L EA ++ GC N+ +L+ C +G ++ AF L + +
Sbjct: 277 TSMIQSCCEKGKLMEALEILDRMRACGCAPNRVTVSILMKGFCAEGRVEEAFKLIDKVVA 336
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 99/259 (38%), Gaps = 45/259 (17%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLG-IEPDLVSY 166
E+A K+F M G C V+ + +L + L ++ + G P++V+Y
Sbjct: 217 LEDACKLFKVMKGHGCSPNVVVYTVILDGVCRFGSLERALELLGEMEKESGDCSPNVVTY 276
Query: 167 NTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR------------- 213
++I++ +KG L A +L M G + +T + L+ GF + GR
Sbjct: 277 TSMIQSCCEKGKLMEALEILDRMRACGCAPNRVTVSILMKGFCAEGRVEEAFKLIDKVVA 336
Query: 214 ----------------------FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKK 251
+AEK++ M+ V+P+ + + L +E +
Sbjct: 337 GGNVSYGECYSSLIVSLVGNKNLQEAEKLFRRMLANAVKPDGLACGTLIKALCLEGRVLD 396
Query: 252 ALELVGEMRSKE----INPDVFTFYALIKGFVNEGNLEEA---KRWYNKSGCGMNKAIFK 304
L E + E ++ D+++ L+ G + + EA R G + F
Sbjct: 397 GFHLFDEFENMEGLSYLDSDIYSI--LLVGLSQKRHSVEAVKLARLMVDRGIQLKTPYFD 454
Query: 305 LLVPFVCEKGDLDFAFNLC 323
+V + E GD + + C
Sbjct: 455 SIVEHLKESGDKEICTHFC 473
>gi|199601721|dbj|BAG70980.1| pentatricopeptide (PPR) repeat-containing protein [Musa balbisiana]
Length = 788
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 166/369 (44%), Gaps = 16/369 (4%)
Query: 8 LSCSFSTTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRL 67
L S + A + + +V+RG ++ +K+ FR + Y + L
Sbjct: 132 LQNSIRSLARSFDQSLVLAVLRGARHPDHALHFFRWVEKTG----FRHDPDTYREIILLL 187
Query: 68 ANAKRFRWIEEILEHQKQYKDIS-KEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQT 126
A A IL + + E A LI YG A + + A K+F +P +T
Sbjct: 188 ARASMLNHARCILLDDMPDRLVPPSEDMFASLIEGYGCARIPQEAVKIFRRLPELGVTRT 247
Query: 127 VLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLL 186
V S++A+ A + S + LF + + G+ P L +YNT++ F +++A
Sbjct: 248 VRSYDAVFKAILRSGRVAMARRLFNAMIAE-GVLPVLSTYNTLLWGFCLSIKMETAQRFF 306
Query: 187 YEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIE 246
+M+++GI DL+T+NT+L G+ + DAEK++ M PN SYN + G
Sbjct: 307 ADMKERGIAPDLVTYNTILNGWARAKKMDDAEKVFAEMTAAGFAPNSISYNIMIKGYVCS 366
Query: 247 KQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE-GNLEEAKRWYNKSG----CGMNKA 301
+ L + EM K + TF AL+ G ++ G EA++ N+ +K+
Sbjct: 367 GRVDDGLRMFSEMGEKGLRFSEKTFAALMPGLCDDVGRAAEARKALNEMAKLQLTPSDKS 426
Query: 302 IFKLLVPFVCEKGDLDFAFNLCKRTFS-ERCLVDQAPLQLVVDRLAKELRVEEA----KE 356
IF LV +CE GDL+ A + ++T +VD ++++ L K + E A E
Sbjct: 427 IFLRLVTSLCESGDLEGALEVHRKTSQFNHVVVDPMQYGVLLESLCKGEKHESAIALLDE 486
Query: 357 LVELGKTNS 365
L+E G S
Sbjct: 487 LLEKGTMQS 495
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 67/170 (39%), Gaps = 11/170 (6%)
Query: 128 LSFNALLGACVNSKKFDEVDGLFKDL--------PHKLGIEPDLVSYNTIIKAFVDKGSL 179
+ + LL + +K + L +L P +EP +YN +I+ D G
Sbjct: 462 MQYGVLLESLCKGEKHESAIALLDELLEKGTMQSPQYPTLEPS--AYNPMIEYLCDHGDT 519
Query: 180 DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNAR 239
A ++ KKG+ D + FN+L+ G G A +I M V + SY
Sbjct: 520 KKAEAFFRQLMKKGVD-DKVAFNSLIRGHAKEGMPEAASEILTIMTRHGVPTDADSYVLL 578
Query: 240 LDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
++ + + A + M + P F +++ ++G ++ A R
Sbjct: 579 VESFLKKSEPADARTALDSMMEQGHLPSASLFRSVMVALFDDGRVQTASR 628
>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
Length = 475
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 131/274 (47%), Gaps = 15/274 (5%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
+I G K + L R +K+ DL N Y + L R I + Q Y
Sbjct: 163 LIDGFCKIDELGRAEKLYKQMIDLNCV-PNVTTYNAFLNGLMRKGR------IADAQGVY 215
Query: 87 KDISKEGFT------ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNS 140
+++ G + + LI + A + A ++F+ M R C +++N LL
Sbjct: 216 EEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKE 275
Query: 141 KKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLIT 200
K DE LF+ + + G +PD V+Y T++ F + G ++ A + EM KG D++
Sbjct: 276 SKPDEAHELFRKMVER-GCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVA 334
Query: 201 FNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMR 260
+N LL GF+ G+ +A ++++ MV+ +P+ S+N +DGL+ K+ A+E+ M
Sbjct: 335 YNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERME 394
Query: 261 SKE-INPDVFTFYALIKGFVNEGNLEEAKRWYNK 293
+PD+ T+ +LI G E L EA + + +
Sbjct: 395 QDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKE 428
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 122/284 (42%), Gaps = 38/284 (13%)
Query: 126 TVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTL 185
+ S+N+LL + +KK + +F + + + PD+VSY+ +I F L A L
Sbjct: 120 SCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKL 179
Query: 186 LYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAI 245
+M ++ T+N L G GR ADA+ ++E M++ P+V +Y+ + G ++
Sbjct: 180 YKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSL 239
Query: 246 EKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAI 302
++ +A EL M S+ P+ T+ L+ G E +EA + K GC +K
Sbjct: 240 ARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVT 299
Query: 303 FKLLVPFVCEKGDLD------------------FAFNLCKRTF----------------- 327
+ L+ C G ++ A+N + F
Sbjct: 300 YTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMV 359
Query: 328 SERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKTNSYCRYNL 371
S C D +++D L+K R+++A E+ E + + C +L
Sbjct: 360 SRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDL 403
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 74/146 (50%), Gaps = 4/146 (2%)
Query: 101 LYG--KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLG 158
LYG E A +VFDEM + + V+++N LL + K E LF+ + +
Sbjct: 304 LYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSR-E 362
Query: 159 IEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEK-KGIRLDLITFNTLLLGFYSNGRFADA 217
+PD VS+N +I LD A + ME+ G DL+T+N+L+ G R ++A
Sbjct: 363 CKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEA 422
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGL 243
K+++ + + + P+ ++N L+ +
Sbjct: 423 MKVFKEIDRLKLSPDPHAFNVLLEAM 448
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 51/103 (49%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
AR++F M R C+ +S N ++ +K+ D+ +F+ + G PDLV+YN++I
Sbjct: 351 ARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLI 410
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
+ L A + E+++ + D FN LL Y+ G
Sbjct: 411 FGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAGH 453
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 92/216 (42%), Gaps = 19/216 (8%)
Query: 167 NTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET--- 223
+++I+ G +DSA +LL M K+G D+ T + L+ A+KI E
Sbjct: 53 HSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLI------NELCKADKIQEAQEF 106
Query: 224 MVNMNVRPNVR-----SYNARLDGLAIEKQTKKALELVGEMRS-KEINPDVFTFYALIKG 277
+ MN + R SYN+ L+ L K+ +A + M S + + PDV ++ LI G
Sbjct: 107 LQGMNRTISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDG 166
Query: 278 FVNEGNLEEAKRWYNKS---GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
F L A++ Y + C N + + + KG + A + + S C D
Sbjct: 167 FCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPD 226
Query: 335 QAPLQLVVDRLAKELRVEEAKELVELGKTNSYCRYN 370
++ + + ++A EL E + CR N
Sbjct: 227 VITYSTLIHGFSLARKHDQAHELFE-AMISRGCRPN 261
>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
Length = 561
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 141/320 (44%), Gaps = 9/320 (2%)
Query: 52 RFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENA 111
R N Y + L A + E+L+ + +I KA F +A
Sbjct: 25 RCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDA 84
Query: 112 RKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIK 171
F + G C +++FN L+ A V S + +E +F+ + P++V+Y T+I
Sbjct: 85 LGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVIN 144
Query: 172 AFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRP 231
G LD A LL M + G ++IT++ L+ G GR + + M +P
Sbjct: 145 GLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQP 204
Query: 232 NVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW- 290
+V YN L+GL ++ +ALELV M P V T+ +L++ F ++ A R
Sbjct: 205 DVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLI 264
Query: 291 --YNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKE 348
++ GC + + ++ +C LD A L K+ + RC+ D ++D L K+
Sbjct: 265 QVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKD 324
Query: 349 LRV------EEAKELVELGK 362
RV E A E++E+ K
Sbjct: 325 WRVDADWKLEAACEILEMMK 344
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/361 (22%), Positives = 153/361 (42%), Gaps = 13/361 (3%)
Query: 12 FSTTA-TATGPKFI--GSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLA 68
F T A T P I ++ + K ++ F+ + N YT + L
Sbjct: 88 FKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLC 147
Query: 69 NAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVL 128
+ E+L+ + + L+ KA + + EM R + V+
Sbjct: 148 KDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVI 207
Query: 129 SFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
+N LL S++ DE L + L + G P +V+YN++++ F +D A L+
Sbjct: 208 MYNTLLNGLCKSRRLDEALELVQ-LMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQV 266
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLA---- 244
M ++G D+I +NT++ G + R DA+ + + MV P+V +Y+ +DGL
Sbjct: 267 MSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWR 326
Query: 245 --IEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK---RWYNKSGCGMN 299
+ + + A E++ M+ P+ T+ +I+G ++A R S +
Sbjct: 327 VDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPD 386
Query: 300 KAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ F +++ +C+ DLD A+ + C + ++D L+K V++A + E
Sbjct: 387 LSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFE 446
Query: 360 L 360
L
Sbjct: 447 L 447
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 93/216 (43%), Gaps = 2/216 (0%)
Query: 78 EILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGAC 137
EILE KQ G A +I +A + A + M + SF+ ++G+
Sbjct: 338 EILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSL 397
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLD 197
S D +F + + +P+ V+Y +I G +D A ++E+ + R
Sbjct: 398 CKSHDLDAAYKIFGMMSER-ECKPNPVAYAALIDGLSKGGEVDKA-VRVFELMVESFRPG 455
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
+ T+N++L G GR +A ++ E M++ P+ SY A + GL ++A EL
Sbjct: 456 VATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQ 515
Query: 258 EMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK 293
+ +K +V + L+ + L +A NK
Sbjct: 516 AVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANK 551
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 62/138 (44%), Gaps = 6/138 (4%)
Query: 237 NARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK--- 293
N L+ L Q +A++L R + P+ FT+ +LI G G L++A ++
Sbjct: 2 NCALNLLVRAGQHGQAVQL---FREERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRD 58
Query: 294 SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEE 353
G A+ ++ +C+ G A K +C D ++VD L K RVEE
Sbjct: 59 RGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEE 118
Query: 354 AKELVELGKTNSYCRYNL 371
A ++ E T+S C N+
Sbjct: 119 AFQIFESMHTSSQCLPNV 136
>gi|242073234|ref|XP_002446553.1| hypothetical protein SORBIDRAFT_06g018030 [Sorghum bicolor]
gi|241937736|gb|EES10881.1| hypothetical protein SORBIDRAFT_06g018030 [Sorghum bicolor]
Length = 381
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 144/309 (46%), Gaps = 7/309 (2%)
Query: 54 RTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARK 113
+ NT Y ++ L + +R+ EE+L+ + E ++ + + + +
Sbjct: 48 KPNTVNYNTVLKGLCSIERWVDAEELLDEMVRENCPPNEATVNVIVNTLSRKGLLQKVTR 107
Query: 114 VFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAF 173
++M C V+++NA++ D L ++ G +PD+V+YNT++K
Sbjct: 108 YLEKMSKHGCTANVVTYNAVISGMCEQGHVDSALELLSNM-QSFGCKPDIVTYNTLLKGL 166
Query: 174 VDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNV 233
+ A L+ +M + D +TFNT++ G A ++++ M PN
Sbjct: 167 CSADQWEDAEELMIKMSQNDCLPDNVTFNTIISFLCQKGLILQAFEVFKQMPEKGCNPNS 226
Query: 234 RSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN-EGNLEEAKRWYN 292
+Y+ + GLA + ++ALEL+ EM SK N D Y L+ +N E +EE + +
Sbjct: 227 TTYSTIIGGLAKAGKMEQALELLNEMASKGYNTD--KMYQLLTESLNKEDKIEEVVQVVH 284
Query: 293 K---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKEL 349
K SG +F ++ +C G D+A ++ S C+ D+ ++++ L+ E
Sbjct: 285 KLQDSGISPQTVLFNTVLLVLCRNGKTDYAIDVLADMVSYGCMPDELTYIILIEGLSYEG 344
Query: 350 RVEEAKELV 358
++EA+ELV
Sbjct: 345 YLQEARELV 353
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 114/245 (46%), Gaps = 38/245 (15%)
Query: 152 DLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSN 211
DL G EP++V+YN II A +G +D A LL + +G + + + +NT+L G S
Sbjct: 5 DLMRAEGCEPNVVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGLCSI 64
Query: 212 GRFADAEKIWETMVNMNVRPN-----------------------------------VRSY 236
R+ DAE++ + MV N PN V +Y
Sbjct: 65 ERWVDAEELLDEMVRENCPPNEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTANVVTY 124
Query: 237 NARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY---NK 293
NA + G+ + ALEL+ M+S PD+ T+ L+KG + E+A+ ++
Sbjct: 125 NAVISGMCEQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIKMSQ 184
Query: 294 SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEE 353
+ C + F ++ F+C+KG + AF + K+ + C + ++ LAK ++E+
Sbjct: 185 NDCLPDNVTFNTIISFLCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAGKMEQ 244
Query: 354 AKELV 358
A EL+
Sbjct: 245 ALELL 249
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/239 (19%), Positives = 110/239 (46%), Gaps = 3/239 (1%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
+VI G+ ++ ++ ++ G + + Y ++ L +A ++ EE++ Q
Sbjct: 126 AVISGMCEQGHVDSALELLSNMQSFG-CKPDIVTYNTLLKGLCSADQWEDAEELMIKMSQ 184
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
+ +I+ + + A +VF +MP + C +++ ++G + K ++
Sbjct: 185 NDCLPDNVTFNTIISFLCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAGKMEQ 244
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
L ++ K G D + Y + ++ + ++ ++++++ GI + FNT+L
Sbjct: 245 ALELLNEMASK-GYNTDKM-YQLLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLFNTVL 302
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
L NG+ A + MV+ P+ +Y ++GL+ E ++A ELV + S+++
Sbjct: 303 LVLCRNGKTDYAIDVLADMVSYGCMPDELTYIILIEGLSYEGYLQEARELVSRLCSRDV 361
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
Query: 253 LELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPF 309
+EL+ MR++ P+V T+ +I EG++++A+ N GC N + ++
Sbjct: 1 MELIDLMRAEGCEPNVVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKG 60
Query: 310 VCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAK 347
+C A L E C ++A + ++V+ L++
Sbjct: 61 LCSIERWVDAEELLDEMVRENCPPNEATVNVIVNTLSR 98
>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
Length = 553
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 130/252 (51%), Gaps = 4/252 (1%)
Query: 110 NARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTI 169
+A K+ +M + C +V++FN L+ + + +P G P+ +SYN +
Sbjct: 282 DAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMH-GCTPNSLSYNPL 340
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
+ F + +D A L M +G D++T+NTLL +G+ A +I + +
Sbjct: 341 LHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGC 400
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
P + +YN +DGL+ +T++A++L+ EMR K + PD+ T+ +L+ G EG ++EA +
Sbjct: 401 SPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIK 460
Query: 290 WYNK-SGCGM--NKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLA 346
+++ G G+ N + ++ +C+ D A + S+RC +A ++++ +A
Sbjct: 461 FFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIA 520
Query: 347 KELRVEEAKELV 358
E +EA +L+
Sbjct: 521 YEGLAKEALDLL 532
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 142/329 (43%), Gaps = 39/329 (11%)
Query: 66 RLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEM---PG-- 120
R+ K+ W+ EILE D+ LI+ Y K+ +NA +V D M P
Sbjct: 104 RIGKTKKATWVMEILEQSGAVPDVITYNV---LISGYCKSGEIDNALQVLDRMNVAPDVV 160
Query: 121 ---------------------------RNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
+ C V+++ L+ A + L ++
Sbjct: 161 TYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEM 220
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
+K G +PD+V+YN +I +G LD A L M G + ++IT N +L S GR
Sbjct: 221 RNK-GSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGR 279
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
+ DAEK+ M+ P+V ++N ++ L + +A++++ +M P+ ++
Sbjct: 280 WMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNP 339
Query: 274 LIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSER 330
L+ GF E ++ A + + GC + + L+ +C+ G +D A + + S+
Sbjct: 340 LLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKG 399
Query: 331 CLVDQAPLQLVVDRLAKELRVEEAKELVE 359
C V+D L+K + E A +L++
Sbjct: 400 CSPVLITYNTVIDGLSKVGKTERAIKLLD 428
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 100/196 (51%), Gaps = 1/196 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+ + K + A + D M R C ++++N LL A K D + L K
Sbjct: 340 LLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSK- 398
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G P L++YNT+I G + A LL EM +KG++ D+IT+++L+ G G+ +A
Sbjct: 399 GCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEA 458
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
K + + + +RPN +YN+ + GL +QT +A++ + M SK P T+ LI+G
Sbjct: 459 IKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEG 518
Query: 278 FVNEGNLEEAKRWYNK 293
EG +EA N+
Sbjct: 519 IAYEGLAKEALDLLNE 534
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 98/201 (48%), Gaps = 6/201 (2%)
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
PD++ ++I+ F G A ++ +E+ G D+IT+N L+ G+ +G +A ++
Sbjct: 90 PDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQV 149
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
+ MNV P+V +YN L L + K+A+E++ KE PDV T+ LI+
Sbjct: 150 LD---RMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCK 206
Query: 281 EGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAP 337
E + +A + ++ G + + +L+ +C++G LD A S C +
Sbjct: 207 ESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVIT 266
Query: 338 LQLVVDRLAKELRVEEAKELV 358
+++ + R +A++L+
Sbjct: 267 HNIILRSMCSTGRWMDAEKLL 287
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 100/194 (51%), Gaps = 6/194 (3%)
Query: 71 KRFRWIE--EILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVL 128
K R IE +I+ + Y DI + L AL K + A ++ +++ + C ++
Sbjct: 349 KMDRAIEYLDIMVSRGCYPDIVT--YNTLLTALC-KDGKVDVAVEILNQLSSKGCSPVLI 405
Query: 129 SFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
++N ++ K + L ++ K G++PD+++Y++++ +G +D A ++
Sbjct: 406 TYNTVIDGLSKVGKTERAIKLLDEMRRK-GLKPDIITYSSLVSGLSREGKVDEAIKFFHD 464
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
+E GIR + IT+N+++LG + + A M++ +P +Y ++G+A E
Sbjct: 465 LEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGL 524
Query: 249 TKKALELVGEMRSK 262
K+AL+L+ E+ S+
Sbjct: 525 AKEALDLLNELCSR 538
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 66/149 (44%)
Query: 211 NGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
NG D K E+MV P++ + + G +TKKA ++ + PDV T
Sbjct: 70 NGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVIT 129
Query: 271 FYALIKGFVNEGNLEEAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSER 330
+ LI G+ G ++ A + ++ + + ++ +C+ G L A + R +
Sbjct: 130 YNVLISGYCKSGEIDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKE 189
Query: 331 CLVDQAPLQLVVDRLAKELRVEEAKELVE 359
C D ++++ KE V +A +L++
Sbjct: 190 CYPDVITYTILIEATCKESGVGQAMKLLD 218
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 83/188 (44%), Gaps = 6/188 (3%)
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
++ V G L+ L M +G D+I +L+ GF G+ A + E +
Sbjct: 64 LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 123
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
P+V +YN + G + AL+++ M + PDV T+ +++ + G L++A
Sbjct: 124 VPDVITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAME 180
Query: 290 WYNKS---GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLA 346
++ C + + +L+ C++ + A L ++ D ++++ +
Sbjct: 181 VLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGIC 240
Query: 347 KELRVEEA 354
KE R++EA
Sbjct: 241 KEGRLDEA 248
>gi|125531614|gb|EAY78179.1| hypothetical protein OsI_33227 [Oryza sativa Indica Group]
Length = 342
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/259 (32%), Positives = 134/259 (51%), Gaps = 13/259 (5%)
Query: 110 NARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVD-GLFKDLPHKL---GIEPDLVS 165
+A +V D+MP +T +SF+ L+ A D VD G L K+ G+ PD+V+
Sbjct: 63 DAAEVLDKMPEWGVGRTPVSFHTLIAAYCR----DGVDAGPALQLKMKMEQEGLVPDVVT 118
Query: 166 YNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMV 225
Y+TII +G + AN +L EM KG+ + +T+NTL+ G+ + G A A ++ E MV
Sbjct: 119 YDTIIHGLCKEGRMGKANQVLSEMRAKGVMPNTVTYNTLIHGYVALGDNAMAGRVHEEMV 178
Query: 226 NMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLE 285
V ++ +YNA + GL E + KK L+ E+ ++ P+ TF ALI G+ N E
Sbjct: 179 KNRVELDIVTYNALILGLFNEGKMKKVEHLLRELDRAKLEPNASTFSALIVGWCKMQNSE 238
Query: 286 EAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV-DQAPLQLV 341
A + N KSG N +K+++ C+ DL+ A ++ RC+ D+A L
Sbjct: 239 RALQLLNVMKKSGFHPNYTTYKMVISSFCKNKDLEGAVDVMGDMLG-RCIAPDKALLNEF 297
Query: 342 VDRLAKELRVEEAKELVEL 360
D L K ++ A+ L L
Sbjct: 298 FDGLWKAKKLHLAENLRSL 316
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 88/166 (53%), Gaps = 2/166 (1%)
Query: 127 VLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLL 186
V+S N + A + ++ + F+++ + I P++ + N +++AF D G A +L
Sbjct: 10 VVSCNVFISAALGLRRPEIALSFFREM-RRCRISPNIYTANMVLRAFCDLGRTADAAEVL 68
Query: 187 YEMEKKGIRLDLITFNTLLLGFYSNGRFA-DAEKIWETMVNMNVRPNVRSYNARLDGLAI 245
+M + G+ ++F+TL+ + +G A A ++ M + P+V +Y+ + GL
Sbjct: 69 DKMPEWGVGRTPVSFHTLIAAYCRDGVDAGPALQLKMKMEQEGLVPDVVTYDTIIHGLCK 128
Query: 246 EKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY 291
E + KA +++ EMR+K + P+ T+ LI G+V G+ A R +
Sbjct: 129 EGRMGKANQVLSEMRAKGVMPNTVTYNTLIHGYVALGDNAMAGRVH 174
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 78/171 (45%), Gaps = 3/171 (1%)
Query: 101 LYGKAAMFENAR--KVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLG 158
++G A+ +NA +V +EM E ++++NAL+ N K +V+ L ++L +
Sbjct: 158 IHGYVALGDNAMAGRVHEEMVKNRVELDIVTYNALILGLFNEGKMKKVEHLLREL-DRAK 216
Query: 159 IEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAE 218
+EP+ +++ +I + + + A LL M+K G + T+ ++ F N A
Sbjct: 217 LEPNASTFSALIVGWCKMQNSERALQLLNVMKKSGFHPNYTTYKMVISSFCKNKDLEGAV 276
Query: 219 KIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVF 269
+ M+ + P+ N DGL K+ A L + PDV+
Sbjct: 277 DVMGDMLGRCIAPDKALLNEFFDGLWKAKKLHLAENLRSLNNGLKFIPDVY 327
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 56/132 (42%), Gaps = 4/132 (3%)
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
P V S N + ++ + AL EMR I+P+++T +++ F + G +A
Sbjct: 8 PRVVSCNVFISAALGLRRPEIALSFFREMRRCRISPNIYTANMVLRAFCDLGRTADAAEV 67
Query: 291 YNKS---GCGMNKAIFKLLVPFVCEKG-DLDFAFNLCKRTFSERCLVDQAPLQLVVDRLA 346
+K G G F L+ C G D A L + E + D ++ L
Sbjct: 68 LDKMPEWGVGRTPVSFHTLIAAYCRDGVDAGPALQLKMKMEQEGLVPDVVTYDTIIHGLC 127
Query: 347 KELRVEEAKELV 358
KE R+ +A +++
Sbjct: 128 KEGRMGKANQVL 139
>gi|359474405|ref|XP_003631455.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g47360-like [Vitis vinifera]
Length = 638
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 123/240 (51%), Gaps = 13/240 (5%)
Query: 101 LYGKAAMF----ENARKVFDEMPGRNCEQTVLS---FNALLGACVNSKKFDEVDGLFKDL 153
LY KA +N R + D + E TV+S FN +L +K DE + K +
Sbjct: 92 LYSKACELFRINQNPRAIIDVIEAYRVEGTVVSVKTFNVVLHLLREAKLADEALWILKKM 151
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
+ I D V+YN++I+ F +KG +D A L+ EM + ++IT+ T++ GF + GR
Sbjct: 152 A-EFNIRADTVAYNSVIRLFCEKGDMDLAAGLMKEMGLIDLYPNMITYVTMIKGFCNVGR 210
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM--RSKEINPDVFTF 271
DA K+++ M PNV Y LDG+ ++ALEL+GEM S + +P+V T+
Sbjct: 211 LEDACKLFKVMKGHGCSPNVVVYTVILDGVCRFGSLERALELLGEMEKESGDCSPNVVTY 270
Query: 272 YALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFS 328
++I+ +G L EA ++ GC N+ +L+ C +G ++ AF L + +
Sbjct: 271 TSMIQSCCEKGKLMEALEILDRMRACGCAPNRVTVSILMKGFCAEGRVEEAFKLIDKVVA 330
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/258 (20%), Positives = 98/258 (37%), Gaps = 45/258 (17%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLG-IEPDLVSY 166
E+A K+F M G C V+ + +L + L ++ + G P++V+Y
Sbjct: 211 LEDACKLFKVMKGHGCSPNVVVYTVILDGVCRFGSLERALELLGEMEKESGDCSPNVVTY 270
Query: 167 NTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR------------- 213
++I++ +KG L A +L M G + +T + L+ GF + GR
Sbjct: 271 TSMIQSCCEKGKLMEALEILDRMRACGCAPNRVTVSILMKGFCAEGRVEEAFKLIDKVVA 330
Query: 214 ----------------------FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKK 251
+AEK++ M+ V+P+ + + L +E +
Sbjct: 331 GGNVSYGECYSSLIVSLVGNKNLQEAEKLFRRMLANAVKPDGLACGTLIKALCLEGRVLD 390
Query: 252 ALELVGEMRSKE----INPDVFTFYALIKGFVNEGNLEEA---KRWYNKSGCGMNKAIFK 304
L E + E ++ D+++ L+ G + + EA R G + F
Sbjct: 391 GFHLFDEFENMEGLSYLDSDIYSI--LLVGLSQKRHSVEAVKLARLMVDRGIQLKTPYFD 448
Query: 305 LLVPFVCEKGDLDFAFNL 322
+V + E GD + L
Sbjct: 449 SIVEHLKESGDKEIVMYL 466
>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12300, mitochondrial; Flags: Precursor
gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 126/264 (47%), Gaps = 7/264 (2%)
Query: 99 IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLG 158
+ L GK A A + D+M C+ +++ +L S + L + + +
Sbjct: 203 LCLSGKEA---EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEER-N 258
Query: 159 IEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAE 218
I+ D V Y+ II GSLD+A L EME KGI ++IT+N L+ GF + GR+ D
Sbjct: 259 IKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGA 318
Query: 219 KIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGF 278
K+ M+ + PNV +++ +D E + ++A EL EM + I PD T+ +LI GF
Sbjct: 319 KLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGF 378
Query: 279 VNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQ 335
E +L++A + + GC N F +L+ C+ +D L ++ + D
Sbjct: 379 CKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADT 438
Query: 336 APLQLVVDRLAKELRVEEAKELVE 359
++ + ++ AKEL +
Sbjct: 439 VTYNTLIQGFCELGKLNVAKELFQ 462
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 130/257 (50%), Gaps = 4/257 (1%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K +NA +F+EM + ++++N L+G N+ ++D+ L +D+ K I P++
Sbjct: 275 KHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI-KRKINPNV 333
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
V+++ +I +FV +G L A L EM +GI D IT+ +L+ GF A ++ +
Sbjct: 334 VTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDL 393
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
MV+ PN+R++N ++G + LEL +M + + D T+ LI+GF G
Sbjct: 394 MVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 453
Query: 284 LEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL 340
L AK + + N +K+L+ +C+ G+ + A + ++ + +D +
Sbjct: 454 LNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNI 513
Query: 341 VVDRLAKELRVEEAKEL 357
++ + +V++A +L
Sbjct: 514 IIHGMCNASKVDDAWDL 530
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 119/260 (45%), Gaps = 39/260 (15%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + A +++ K+ +M R V++F+ L+ + V K E + L K++ H+
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHR- 362
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANT--------------------------------- 184
GI PD ++Y ++I F + LD AN
Sbjct: 363 GIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDG 422
Query: 185 --LLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDG 242
L +M +G+ D +T+NTL+ GF G+ A+++++ MV+ V PN+ +Y LDG
Sbjct: 423 LELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDG 482
Query: 243 LAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMN 299
L +++KALE+ ++ ++ D+ + +I G N +++A + G
Sbjct: 483 LCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPG 542
Query: 300 KAIFKLLVPFVCEKGDLDFA 319
+ +++ +C+KG L A
Sbjct: 543 VKTYNIMIGGLCKKGPLSEA 562
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 150/339 (44%), Gaps = 15/339 (4%)
Query: 14 TTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRF 73
TT T IG ++ K L D K+ + N ++ + +
Sbjct: 295 TTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR-----KINPNVVTFSVLIDSFVKEGKL 349
Query: 74 RWIEEILEHQKQYKDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNA 132
R EE L + ++ I+ + T LI + K + A ++ D M + C+ + +FN
Sbjct: 350 REAEE-LHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNI 408
Query: 133 LLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKK 192
L+ + + D+ LF+ + + G+ D V+YNT+I+ F + G L+ A L EM +
Sbjct: 409 LINGYCKANRIDDGLELFRKMSLR-GVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSR 467
Query: 193 GIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKA 252
+ +++T+ LL G NG A +I+E + + ++ YN + G+ + A
Sbjct: 468 KVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDA 527
Query: 253 LELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPF 309
+L + K + P V T+ +I G +G L EA+ + K G + + +L+
Sbjct: 528 WDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRA 587
Query: 310 VCEKGDLDFAFNLCKRTFSERC--LVDQAPLQLVVDRLA 346
GD + L + +RC VD + +++V+D L+
Sbjct: 588 HLGDGDATKSVKLIEEL--KRCGFSVDASTIKMVIDMLS 624
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 124/286 (43%), Gaps = 37/286 (12%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGL-----FKDLPH-------- 155
++A +F +M TV+ F+ L A +K++D V L K + H
Sbjct: 70 DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 129
Query: 156 ---------------------KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGI 194
KLG EP+ ++++T+I +G + A L+ M + G
Sbjct: 130 INCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH 189
Query: 195 RLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALE 254
+ DLIT NTL+ G +G+ A+A + + MV +PN +Y L+ + QT A+E
Sbjct: 190 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAME 249
Query: 255 LVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVC 311
L+ +M + I D + +I G G+L+ A +N+ G N + +L+ C
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFC 309
Query: 312 EKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
G D L + + + +++D KE ++ EA+EL
Sbjct: 310 NAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEEL 355
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 104/241 (43%), Gaps = 9/241 (3%)
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLD 197
V+ K D +D LF+D+ H + P ++ ++ + A D L +ME KGI +
Sbjct: 65 VDIKADDAID-LFRDMIHSRPL-PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHN 122
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
L T + ++ F + A ++ + PN +++ ++GL +E + +ALELV
Sbjct: 123 LYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVD 182
Query: 258 EMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS---GCGMNKAIFKLLVPFVCEKG 314
M PD+ T L+ G G EA +K GC N + ++ +C+ G
Sbjct: 183 RMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSG 242
Query: 315 DLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA----KELVELGKTNSYCRYN 370
A L ++ +D +++D L K ++ A E+ G T + YN
Sbjct: 243 QTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYN 302
Query: 371 L 371
+
Sbjct: 303 I 303
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 69/148 (46%), Gaps = 1/148 (0%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
E A ++F+++ E + +N ++ N+ K D+ LF LP K G++P + +YN
Sbjct: 490 EKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK-GVKPGVKTYNI 548
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
+I KG L A L +ME+ G D T+N L+ +G + K+ E +
Sbjct: 549 MIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCG 608
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELV 256
+ + +D L+ + K L+++
Sbjct: 609 FSVDASTIKMVIDMLSDGRLKKSFLDML 636
>gi|255660872|gb|ACU25605.1| pentatricopeptide repeat-containing protein [Verbena officinalis]
Length = 484
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 130/285 (45%), Gaps = 34/285 (11%)
Query: 73 FRWIEE--ILEHQKQYK---------------------DISKEGFT------ARLIALYG 103
FRW+E + EH ++ D+ K+G +I YG
Sbjct: 32 FRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYG 91
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K + + + K+F +M E+T+ S+NAL + ++ F + + GIEP
Sbjct: 92 KEGIVQESVKMFQKMEELXVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSE-GIEPTR 150
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
++N +I F G +++AN +M+ + I D++T+NT++ G+Y + +AEK +
Sbjct: 151 HTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVE 210
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M N+ P V +Y + G Q AL LV EM+ I P+ T+ L+ G N
Sbjct: 211 MKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVZEMKGXGIKPNAITYSTLLPGLCNAEK 270
Query: 284 LEEA----KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCK 324
+ EA K +K + +IF L+ C+ G+LD A ++ K
Sbjct: 271 MSEARVJLKEMMDKYLAPTDNSIFMRLIXSHCKSGNLDAAADVLK 315
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 98/234 (41%), Gaps = 46/234 (19%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I Y + E A K F EM GRN E TV+++ L+ V+ + D+ L +++
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVZEM-KGX 249
Query: 158 GIEPDLVSYNT----------------IIKAFVDK--------------------GSLDS 181
GI+P+ ++Y+T J+K +DK G+LD+
Sbjct: 250 GIKPNAITYSTLLPGLCNAEKMSEARVJLKEMMDKYLAPTDNSIFMRLIXSHCKSGNLDA 309
Query: 182 ANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV--RPNV------ 233
A +L M + + + L+ F G++ A K+ + ++ ++ RP
Sbjct: 310 AADVLKAMIRLSVPTEAGHXGXLIENFCKVGQYDKAVKLLDKLIEKDIILRPQSTLHLEP 369
Query: 234 RSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+YN ++ L Q KA LV ++ + D LI+G EG+ + A
Sbjct: 370 SAYNPMIEYLCNNGQAXKAETLVRQLXKLGVQ-DPTALNTLIRGHSQEGSPDSA 422
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/215 (19%), Positives = 93/215 (43%), Gaps = 17/215 (7%)
Query: 37 LKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTA 96
LK ++DK+ +D I+ + + ++L+ + ++ G
Sbjct: 278 LKEMMDKYLAPTD-------NSIFMRLIXSHCKSGNLDAAADVLKAMIRLSVPTEAGHXG 330
Query: 97 RLIALYGKAAMFENARKVFDEM--------PGRNCEQTVLSFNALLGACVNSKKFDEVDG 148
LI + K ++ A K+ D++ P ++N ++ N+ + + +
Sbjct: 331 XLIENFCKVGQYDKAVKLLDKLIEKDIILRPQSTLHLEPSAYNPMIEYLCNNGQAXKAET 390
Query: 149 LFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
L + L KLG++ D + NT+I+ +GS DSA LL M ++ + + +N+L+ +
Sbjct: 391 LVRQL-XKLGVQ-DPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKXAYNSLVQSY 448
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
DA+ ++M+ + P+ + + ++ L
Sbjct: 449 LKKNEPXDAKAALDSMIENDHLPDSALFRSVMESL 483
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 96/250 (38%), Gaps = 17/250 (6%)
Query: 39 RLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEIL-EHQKQYKDISKEGFTAR 97
RLV++ K + N Y+ + L NA++ JL E +Y + R
Sbjct: 241 RLVZEMKGXG----IKPNAITYSTLLPGLCNAEKMSEARVJLKEMMDKYLAPTDNSIFMR 296
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHK- 156
LI + K+ + A V M + L+ ++D+ L L K
Sbjct: 297 LIXSHCKSGNLDAAADVLKAMIRLSVPTEAGHXGXLIENFCKVGQYDKAVKLLDKLIEKD 356
Query: 157 --------LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
L +EP +YN +I+ + G A TL+ ++ K G++ D NTL+ G
Sbjct: 357 IILRPQSTLHLEPS--AYNPMIEYLCNNGQAXKAETLVRQLXKLGVQ-DPTALNTLIRGH 413
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDV 268
G A ++ + M+ V +YN+ + + + A + M + PD
Sbjct: 414 SQEGSPDSAFELLKIMLRRKVDSEKXAYNSLVQSYLKKNEPXDAKAALDSMIENDHLPDS 473
Query: 269 FTFYALIKGF 278
F ++++
Sbjct: 474 ALFRSVMESL 483
>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
Length = 568
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 105/191 (54%), Gaps = 1/191 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K + A ++F+ M R TV+++ +L+ A + E D LF + +
Sbjct: 333 LINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRR- 391
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
GI PDLV YN +I + G++D A ++ EMEKK I D +T+NTL+ G GR +A
Sbjct: 392 GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEA 451
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
K+ + M ++P++ +YN + G +++ K AL + EM +K NP + T+ ALI+G
Sbjct: 452 RKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQG 511
Query: 278 FVNEGNLEEAK 288
G ++A+
Sbjct: 512 LCKNGQGDDAE 522
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 101/202 (50%), Gaps = 7/202 (3%)
Query: 86 YKDISKEGFTA------RLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
++++S+ G A LI K + K+FDE R ++ +NAL+ +
Sbjct: 350 FENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHST 409
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
S D + ++ K I PD V+YNT+++ G +D A L+ EM K+GI+ DL+
Sbjct: 410 SGNIDRAFEIMGEMEKK-RIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLV 468
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
T+NTL+ G+ G DA +I M+N P + +YNA + GL Q A +V EM
Sbjct: 469 TYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEM 528
Query: 260 RSKEINPDVFTFYALIKGFVNE 281
I PD T+ +LI+G E
Sbjct: 529 VENGITPDDSTYISLIEGLTTE 550
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 131/301 (43%), Gaps = 5/301 (1%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
+VI G ++ +D ++ + G N Y + R ++ +
Sbjct: 190 TVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLT 249
Query: 86 YKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
++ E LI Y + A D M R TV ++N L+ A +
Sbjct: 250 KGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGT 309
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
E L +++ K G+ D+ +YN +I +G++ A + M ++G+R ++T+ +L
Sbjct: 310 EAYELVEEMGGK-GLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSL 368
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+ G+ + +K+++ V +RP++ YNA ++ + +A E++GEM K I
Sbjct: 369 IYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRI 428
Query: 265 NPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFN 321
PD T+ L++G G ++EA++ + K G + + L+ KGD+ A
Sbjct: 429 APDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALR 488
Query: 322 L 322
+
Sbjct: 489 I 489
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 107/228 (46%), Gaps = 14/228 (6%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
+I G KE N+K+ ++ F+ S G R YT + L+ ++ E K +
Sbjct: 333 LINGHCKEGNVKKALEIFENMSRRG-VRATVVTYTSLIYALSKKG------QVQETDKLF 385
Query: 87 KDISKEGFTARLI---ALYGKAAMFENARKVFD---EMPGRNCEQTVLSFNALLGACVNS 140
+ + G L+ AL + N + F+ EM + +++N L+
Sbjct: 386 DEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLL 445
Query: 141 KKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLIT 200
+ DE L ++ K GI+PDLV+YNT+I + KG + A + EM KG L+T
Sbjct: 446 GRVDEARKLIDEM-TKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLT 504
Query: 201 FNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
+N L+ G NG+ DAE + + MV + P+ +Y + ++GL E +
Sbjct: 505 YNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 552
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 89/196 (45%), Gaps = 42/196 (21%)
Query: 129 SFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
+FN +L ++ K L + +P P+ V+YNT+I F +G + +A ++ E
Sbjct: 156 TFNIMLRHLCSAGKPARALELLRQMPR-----PNAVTYNTVIAGFCSRGRVQAALDIMRE 210
Query: 189 M-EKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN-VRPNVRSYNARLDG---- 242
M E+ GI + T+ T++ G+ GR +A K+++ M+ V+P YNA + G
Sbjct: 211 MRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQ 270
Query: 243 -------------------------------LAIEKQTKKALELVGEMRSKEINPDVFTF 271
L ++ + +A ELV EM K + DVFT+
Sbjct: 271 GKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTY 330
Query: 272 YALIKGFVNEGNLEEA 287
LI G EGN+++A
Sbjct: 331 NILINGHCKEGNVKKA 346
>gi|357138636|ref|XP_003570896.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Brachypodium distachyon]
Length = 500
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 136/275 (49%), Gaps = 8/275 (2%)
Query: 89 ISKEGFTARL-IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGA-CVNSKKFDEV 146
IS + +TA + +A + +A K+ DEMP +TV+SFN L+ A C +
Sbjct: 199 ISPDTYTANMMLAAFCALGRVADAAKMLDEMPEWGVYRTVVSFNTLIAAYCRGHGGLENA 258
Query: 147 DGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLL 206
L + + K G PD V+YNTII + + AN LL EM + + +T+N L+
Sbjct: 259 LELKRRM-EKEGCAPDAVTYNTIIHGLCKERQMRQANQLLIEMRVMRVAPNTVTYNMLIH 317
Query: 207 GFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINP 266
G G A ++ E MV ++ ++ +YN + GL E + K++ L+ E+ + + P
Sbjct: 318 GHVMLGDNKTASRVREEMVKNGLQLDIVTYNTLILGLCREGKVKESEHLLQELDKRGLEP 377
Query: 267 DVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLC 323
+ TF ALI G N E A + N KSG N FK++V C+ D + A ++
Sbjct: 378 NASTFAALITGHWKTQNSERALQLLNVMKKSGFHPNYDTFKIVVSTFCKNKDFEGAVDVM 437
Query: 324 KRTFSERCLV-DQAPLQLVVDRLAKELRVEEAKEL 357
K RC+ D+A L D L+K ++ A++L
Sbjct: 438 KDILG-RCMAPDKALLHEFFDGLSKAKKLHLAEDL 471
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 92/224 (41%), Gaps = 40/224 (17%)
Query: 130 FNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEM 189
+ L AC + K + F+ + G+ P + S NT I A + + A +M
Sbjct: 136 IDVLFSACARANKLSQATLAFRAM-RAHGLLPRVESCNTFISAALRLKRPEIAVAFFRQM 194
Query: 190 EKKGIRLDLITFNTLLLGFYSNGRFADAEK---------IWETMVNMNV----------- 229
+ I D T N +L F + GR ADA K ++ T+V+ N
Sbjct: 195 RRCCISPDTYTANMMLAAFCALGRVADAAKMLDEMPEWGVYRTVVSFNTLIAAYCRGHGG 254
Query: 230 ----------------RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
P+ +YN + GL E+Q ++A +L+ EMR + P+ T+
Sbjct: 255 LENALELKRRMEKEGCAPDAVTYNTIIHGLCKERQMRQANQLLIEMRVMRVAPNTVTYNM 314
Query: 274 LIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKG 314
LI G V G+ + A R K+G ++ + L+ +C +G
Sbjct: 315 LIHGHVMLGDNKTASRVREEMVKNGLQLDIVTYNTLILGLCREG 358
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 94/212 (44%), Gaps = 5/212 (2%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFEN--ARKVFDE 117
Y + L ++ R ++L + + ++ T ++ ++G + +N A +V +E
Sbjct: 277 YNTIIHGLCKERQMRQANQLLIEMRVMR-VAPNTVTYNML-IHGHVMLGDNKTASRVREE 334
Query: 118 MPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKG 177
M + ++++N L+ K E + L ++L K G+EP+ ++ +I
Sbjct: 335 MVKNGLQLDIVTYNTLILGLCREGKVKESEHLLQEL-DKRGLEPNASTFAALITGHWKTQ 393
Query: 178 SLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYN 237
+ + A LL M+K G + TF ++ F N F A + + ++ + P+ +
Sbjct: 394 NSERALQLLNVMKKSGFHPNYDTFKIVVSTFCKNKDFEGAVDVMKDILGRCMAPDKALLH 453
Query: 238 ARLDGLAIEKQTKKALELVGEMRSKEINPDVF 269
DGL+ K+ A +L R+ + P V+
Sbjct: 454 EFFDGLSKAKKLHLAEDLRSADRAGRLIPAVY 485
>gi|356518400|ref|XP_003527867.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Glycine max]
Length = 546
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 156/341 (45%), Gaps = 8/341 (2%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
S I I +E + + ++ F S+ F+ N Y + +LA F ++ +L HQ
Sbjct: 95 SAIDLIKREKDPQHALNIFNMVSEQNGFQHNNATYATILDKLARCNNFHAVDRVL-HQMT 153
Query: 86 YKDIS-KEGFTARLIALYGKAAMFENA-RKVFDEMPGRNCEQTVLSFNALLGACVNSKKF 143
Y+ EG L+ + K+++ E F P + + + + L ++S +
Sbjct: 154 YETCKFHEGIFVNLMKHFSKSSLHEKLLHAYFSIQPIVREKPSPKALSTCLNLLLDSNRV 213
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRL-DLITFN 202
D L L +P++ +N ++K G LDSA ++ EM +L+T++
Sbjct: 214 DLARKLLLHAKRDLTRKPNVCVFNILVKYHCKNGDLDSAFEIVEEMRNSEFSYPNLVTYS 273
Query: 203 TLLLGFYSNGRFADAEKIWETMVNM-NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS 261
TL+ G NGR +A ++E MV+ ++ P+ +YN ++G + +A ++ M+S
Sbjct: 274 TLMDGLCRNGRVKEAFDLFEEMVSRDHIVPDPLTYNVLINGFCRGGKPDRARNVIQFMKS 333
Query: 262 KEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDF 318
P+V+ + AL+ G G LE+AK + SG + + L+ F+C G D
Sbjct: 334 NGCYPNVYNYSALVDGLCKVGKLEDAKGVLAEIKGSGLKPDAVTYTSLINFLCRNGKSDE 393
Query: 319 AFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
A L + C D +++ L +E + EEA ++VE
Sbjct: 394 AIELLEEMKENGCQADSVTFNVLLGGLCREGKFEEALDMVE 434
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 118/271 (43%), Gaps = 5/271 (1%)
Query: 56 NTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTAR-LIALYGKAAMFENARKV 114
N Y+ + L R + ++ E I + T LI + + + AR V
Sbjct: 268 NLVTYSTLMDGLCRNGRVKEAFDLFEEMVSRDHIVPDPLTYNVLINGFCRGGKPDRARNV 327
Query: 115 FDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFV 174
M C V +++AL+ K ++ G+ ++ G++PD V+Y ++I
Sbjct: 328 IQFMKSNGCYPNVYNYSALVDGLCKVGKLEDAKGVLAEIKGS-GLKPDAVTYTSLINFLC 386
Query: 175 DKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVR 234
G D A LL EM++ G + D +TFN LL G G+F +A + E + V N
Sbjct: 387 RNGKSDEAIELLEEMKENGCQADSVTFNVLLGGLCREGKFEEALDMVEKLPQQGVYLNKG 446
Query: 235 SYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK-RWYNK 293
SY L+ L + + K+A EL+G M + P T L+ G +++A ++
Sbjct: 447 SYRIVLNSLTQKCELKRAKELLGLMLRRGFQPHYATSNELLVCLCKAGMVDDAAVALFDL 506
Query: 294 SGCGMNKAI--FKLLVPFVCEKGDLDFAFNL 322
G + +++L+ +C + L + F L
Sbjct: 507 VEMGFQPGLETWEVLIGLICRERKLLYVFEL 537
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 126/262 (48%), Gaps = 13/262 (4%)
Query: 67 LANAKRFRWIEEILEHQKQYKDISKEGFTAR---LIALYGKAAMFENARKVFDEMPGRNC 123
L ++ R ++L H K +D++++ L+ + K ++A ++ +EM RN
Sbjct: 207 LLDSNRVDLARKLLLHAK--RDLTRKPNVCVFNILVKYHCKNGDLDSAFEIVEEM--RNS 262
Query: 124 E---QTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLD 180
E +++++ L+ + + E LF+++ + I PD ++YN +I F G D
Sbjct: 263 EFSYPNLVTYSTLMDGLCRNGRVKEAFDLFEEMVSRDHIVPDPLTYNVLINGFCRGGKPD 322
Query: 181 SANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARL 240
A ++ M+ G ++ ++ L+ G G+ DA+ + + ++P+ +Y + +
Sbjct: 323 RARNVIQFMKSNGCYPNVYNYSALVDGLCKVGKLEDAKGVLAEIKGSGLKPDAVTYTSLI 382
Query: 241 DGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCG 297
+ L ++ +A+EL+ EM+ D TF L+ G EG EEA K G
Sbjct: 383 NFLCRNGKSDEAIELLEEMKENGCQADSVTFNVLLGGLCREGKFEEALDMVEKLPQQGVY 442
Query: 298 MNKAIFKLLVPFVCEKGDLDFA 319
+NK +++++ + +K +L A
Sbjct: 443 LNKGSYRIVLNSLTQKCELKRA 464
>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
Length = 465
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 154/317 (48%), Gaps = 17/317 (5%)
Query: 53 FRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFT-------ARLIALYGKA 105
+ N Y G ++ L +R+ EE++ IS+ G + + L++ Y KA
Sbjct: 41 IQPNVVSYNGLLEGLCKLERWHEAEELVRDM-----ISRGGRSTPDMVTYSTLLSGYCKA 95
Query: 106 AMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVS 165
E +R++ E+ R L + ++ + S + E L +++ + G P L++
Sbjct: 96 GKVEESRELLKEVISRGLRPDALMYTKVVASLCKSARLGEALELLEEM-IRAGCCPTLIT 154
Query: 166 YNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMV 225
+NT+I + +L+ A++LL +M G++ D++T+NTL+ G GR +AE++ E M
Sbjct: 155 FNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMK 214
Query: 226 NMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLE 285
P+V +Y++ + GL + A +++ +MR +P+V T+ ++ G G ++
Sbjct: 215 ASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKID 274
Query: 286 EA----KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLV 341
A ++ + GCG+N + +V +C+ G A ++ + C D +
Sbjct: 275 TALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSL 334
Query: 342 VDRLAKELRVEEAKELV 358
V+ L K ++EEA E V
Sbjct: 335 VNGLCKAGKIEEAVEAV 351
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 129/267 (48%), Gaps = 5/267 (1%)
Query: 97 RLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHK 156
+++A K+A A ++ +EM C T+++FN L+ C K + D L + +
Sbjct: 122 KVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAAS 181
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
G++ D+V+YNT++ G L A LL M+ G D++ +++ + G +G+ D
Sbjct: 182 -GVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLD 240
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE-INPDVFTFYALI 275
A ++ E M + + PNV +YN LDGL + ALE++ +M S + +V + ++
Sbjct: 241 AHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300
Query: 276 KGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCL 332
G G +EA+ ++GC + + LV +C+ G ++ A + E C
Sbjct: 301 DGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCK 360
Query: 333 VDQAPLQLVVDRLAKELRVEEAKELVE 359
+ +V L R+ EA+ +VE
Sbjct: 361 PNAVTYCSLVHGLCSCGRLAEAERMVE 387
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 132/303 (43%), Gaps = 21/303 (6%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I G +E NL+ + D + + + Y + L A R + E++LE K
Sbjct: 157 TLISGCCREKNLE-MADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMK- 214
Query: 86 YKDISKEGFTARLIA----LYG--KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
G ++A +YG K+ +A +V ++M + + V+++N +L
Sbjct: 215 -----ASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCK 269
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
S K D + + + G ++V Y+T++ G A +++ M + G R D++
Sbjct: 270 SGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVV 329
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
T+++L+ G G+ +A + M +PN +Y + + GL + +A +V EM
Sbjct: 330 TYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEM 389
Query: 260 -----RSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVC 311
P V T+ ALI G G +++A +++ + GC + + +V +
Sbjct: 390 SSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLA 449
Query: 312 EKG 314
G
Sbjct: 450 RSG 452
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 95/211 (45%), Gaps = 40/211 (18%)
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
M++ G + +TFN L+ GF GR D E++ ETM +++PNV SYN L+GL ++
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60
Query: 249 TKKALELVGEM--RSKEINPDVFTFYALIKGFVNEGNLEEAKR---------------WY 291
+A ELV +M R PD+ T+ L+ G+ G +EE++ Y
Sbjct: 61 WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120
Query: 292 NK-----------------------SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFS 328
K +GC F L+ C + +L+ A +L ++ +
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAA 180
Query: 329 ERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
D ++D L K R++EA++L+E
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLE 211
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 114/243 (46%), Gaps = 6/243 (2%)
Query: 122 NCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDS 181
C ++FNAL+ + + + L + + + I+P++VSYN +++
Sbjct: 5 GCPPNSVTFNALVNGFSKQGRPGDCERLLETMAAR-DIQPNVVSYNGLLEGLCKLERWHE 63
Query: 182 ANTLLYEMEKKGIRL--DLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNAR 239
A L+ +M +G R D++T++TLL G+ G+ ++ ++ + +++ +RP+ Y
Sbjct: 64 AEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKV 123
Query: 240 LDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGC 296
+ L + +ALEL+ EM P + TF LI G E NLE A K SG
Sbjct: 124 VASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGV 183
Query: 297 GMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKE 356
+ + L+ +C+ G L A L +R + C D V L K +V +A +
Sbjct: 184 KADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQ 243
Query: 357 LVE 359
++E
Sbjct: 244 VLE 246
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 75/157 (47%), Gaps = 6/157 (3%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
+ AR V + M C V+++++L+ + K +E +++ + G +P+ V+Y +
Sbjct: 310 QEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAME-GCKPNAVTYCS 368
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRL-----DLITFNTLLLGFYSNGRFADAEKIWET 223
++ G L A ++ EM G + T+N L+ G GR DA K ++
Sbjct: 369 LVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQR 428
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMR 260
M + P+ SY+ ++GLA + +A ++ E+R
Sbjct: 429 MRSQGCDPDGVSYSTIVEGLARSGRALQAEMILSEVR 465
>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
Length = 975
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 126/264 (47%), Gaps = 7/264 (2%)
Query: 99 IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLG 158
+ L GK A A + D+M C+ +++ +L S + L + + +
Sbjct: 301 LCLSGKEA---EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEER-N 356
Query: 159 IEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAE 218
I+ D V Y+ II GSLD+A L EME KGI ++IT+N L+ GF + GR+ D
Sbjct: 357 IKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGA 416
Query: 219 KIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGF 278
K+ M+ + PNV +++ +D E + ++A EL EM + I PD T+ +LI GF
Sbjct: 417 KLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGF 476
Query: 279 VNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQ 335
E +L++A + + GC N F +L+ C+ +D L ++ + D
Sbjct: 477 CKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADT 536
Query: 336 APLQLVVDRLAKELRVEEAKELVE 359
++ + ++ AKEL +
Sbjct: 537 VTYNTLIQGFCELGKLNVAKELFQ 560
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 130/257 (50%), Gaps = 4/257 (1%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K +NA +F+EM + ++++N L+G N+ ++D+ L +D+ K I P++
Sbjct: 373 KHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI-KRKINPNV 431
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
V+++ +I +FV +G L A L EM +GI D IT+ +L+ GF A ++ +
Sbjct: 432 VTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDL 491
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
MV+ PN+R++N ++G + LEL +M + + D T+ LI+GF G
Sbjct: 492 MVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 551
Query: 284 LEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL 340
L AK + + N +K+L+ +C+ G+ + A + ++ + +D +
Sbjct: 552 LNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNI 611
Query: 341 VVDRLAKELRVEEAKEL 357
++ + +V++A +L
Sbjct: 612 IIHGMCNASKVDDAWDL 628
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 151/341 (44%), Gaps = 15/341 (4%)
Query: 14 TTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRF 73
TT T IG ++ K L D K+ + N ++ + +
Sbjct: 393 TTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR-----KINPNVVTFSVLIDSFVKEGKL 447
Query: 74 RWIEEILEHQKQYKDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNA 132
R EE L + ++ I+ + T LI + K + A ++ D M + C+ + +FN
Sbjct: 448 REAEE-LHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNI 506
Query: 133 LLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKK 192
L+ + + D+ LF+ + + G+ D V+YNT+I+ F + G L+ A L EM +
Sbjct: 507 LINGYCKANRIDDGLELFRKMSLR-GVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSR 565
Query: 193 GIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKA 252
+ +++T+ LL G NG A +I+E + + ++ YN + G+ + A
Sbjct: 566 KVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDA 625
Query: 253 LELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPF 309
+L + K + P V T+ +I G +G L EA+ + K G + + +L+
Sbjct: 626 WDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRA 685
Query: 310 VCEKGDLDFAFNLCKRTFSERC--LVDQAPLQLVVDRLAKE 348
GD + L + +RC VD + +++V+D L+ +
Sbjct: 686 HLGDGDATKSVKLIEEL--KRCGFSVDASTIKMVIDMLSDD 724
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 124/286 (43%), Gaps = 37/286 (12%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGL-----FKDLPH-------- 155
++A +F +M TV+ F+ L A +K++D V L K + H
Sbjct: 168 DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 227
Query: 156 ---------------------KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGI 194
KLG EP+ ++++T+I +G + A L+ M + G
Sbjct: 228 INCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH 287
Query: 195 RLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALE 254
+ DLIT NTL+ G +G+ A+A + + MV +PN +Y L+ + QT A+E
Sbjct: 288 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAME 347
Query: 255 LVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVC 311
L+ +M + I D + +I G G+L+ A +N+ G N + +L+ C
Sbjct: 348 LLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFC 407
Query: 312 EKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
G D L + + + +++D KE ++ EA+EL
Sbjct: 408 NAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEEL 453
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 107/251 (42%), Gaps = 8/251 (3%)
Query: 128 LSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLY 187
LS+ L + + K D+ LF+D+ H + P ++ ++ + A D L
Sbjct: 152 LSYRERLRSGLVDIKADDAIDLFRDMIHSRPL-PTVIDFSRLFSAIAKTKQYDLVLALCK 210
Query: 188 EMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEK 247
+ME KGI +L T + ++ F + A ++ + PN +++ ++GL +E
Sbjct: 211 QMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEG 270
Query: 248 QTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS---GCGMNKAIFK 304
+ +ALELV M PD+ T L+ G G EA +K GC N +
Sbjct: 271 RVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYG 330
Query: 305 LLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA----KELVEL 360
++ +C+ G A L ++ +D +++D L K ++ A E+
Sbjct: 331 PVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMK 390
Query: 361 GKTNSYCRYNL 371
G T + YN+
Sbjct: 391 GITTNIITYNI 401
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 65/139 (46%), Gaps = 1/139 (0%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
E A ++F+++ E + +N ++ N+ K D+ LF LP K G++P + +YN
Sbjct: 588 EKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK-GVKPGVKTYNI 646
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
+I KG L A L +ME+ G D T+N L+ +G + K+ E +
Sbjct: 647 MIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCG 706
Query: 229 VRPNVRSYNARLDGLAIEK 247
+ + +D L+ +K
Sbjct: 707 FSVDASTIKMVIDMLSDDK 725
>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Brachypodium distachyon]
Length = 524
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 114/220 (51%), Gaps = 7/220 (3%)
Query: 70 AKRFRWIEEILEHQKQYKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVL 128
A+ +EE+ E K ++ + FT LI Y K + A K+F+ M G+ TV+
Sbjct: 271 AEAHALVEEMGE-----KGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVV 325
Query: 129 SFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
++ +L+ A E D LF D + GI PDL YN +I + G +D A ++ E
Sbjct: 326 TYTSLIHALSMKGMVQETDRLFNDAVRR-GIRPDLFMYNALINSHCTGGDMDRAFEIMGE 384
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
MEKK I D +T+NTL+ G GR +A + E M ++P++ SYN + G +++
Sbjct: 385 MEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGD 444
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
K A+++ EM K NP + T+ A+IKG G +A+
Sbjct: 445 IKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAE 484
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 128/286 (44%), Gaps = 39/286 (13%)
Query: 78 EILEHQKQYKDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGA 136
EI+ ++ I+ + +T A +I+ + K E+A KVFDEM
Sbjct: 168 EIMREMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEM------------------ 209
Query: 137 CVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRL 196
+ K +EP+ V YN +I + D+G+L+ A EM +G+ +
Sbjct: 210 -LTEGK----------------VEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSM 252
Query: 197 DLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELV 256
+ T+N + + GR A+A + E M + P+ +YN ++G E + KKA+++
Sbjct: 253 TVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMF 312
Query: 257 GEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEK 313
M K I V T+ +LI +G ++E R +N + G + ++ L+ C
Sbjct: 313 EVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTG 372
Query: 314 GDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
GD+D AF + +R D ++ L R++EA+ L+E
Sbjct: 373 GDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIE 418
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 102/228 (44%), Gaps = 14/228 (6%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
+I G KE K+ + F+ G R YT + L+ + E + +
Sbjct: 295 LINGYCKEGKEKKAMKMFEVMVGKG-IRATVVTYTSLIHALSMKGMVQ------ETDRLF 347
Query: 87 KDISKEGFTA------RLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNS 140
D + G LI + + A ++ EM + +++N L+
Sbjct: 348 NDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLL 407
Query: 141 KKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLIT 200
+ DE GL +++ K GI+PDLVSYNT+I + KG + A + EM KG L+T
Sbjct: 408 GRLDEARGLIEEM-TKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLT 466
Query: 201 FNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
+N ++ G NG+ DAE + + MV + P+ +Y + ++GL E +
Sbjct: 467 YNAMIKGLCLNGQGGDAEDLVKEMVGNGITPDDSTYISLIEGLTTEDE 514
>gi|224068454|ref|XP_002326124.1| predicted protein [Populus trichocarpa]
gi|222833317|gb|EEE71794.1| predicted protein [Populus trichocarpa]
Length = 512
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 123/284 (43%), Gaps = 38/284 (13%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
+ A +VF +M C V+++N L+ + + LFK++ + PD+V+Y +
Sbjct: 195 DRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTS 254
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAE---------- 218
II F G + A+ L EM + GI+ ++ITFN L+ GF G A+AE
Sbjct: 255 IISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFD 314
Query: 219 -------------------------KIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKAL 253
K W M NV P V +Y ++ L E + +A
Sbjct: 315 CSADVVTFTSLIDGYCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKENRLNEAR 374
Query: 254 ELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK---RWYNKSGCGMNKAIFKLLVPFV 310
+ +G++++ I P F + +I GF GN++E + + C +K F +L+
Sbjct: 375 DFLGQIKNSSIIPKPFMYNPVIDGFCKAGNVDEGNVILKEMEEKRCDPDKVTFTILIIGH 434
Query: 311 CEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA 354
C KG + A N+ R + RC D + ++ L K EA
Sbjct: 435 CVKGRMFEAINIFNRMLATRCAPDNITVNSLISCLLKAGMPNEA 478
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 118/272 (43%), Gaps = 5/272 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+ +A+ F+ +K+ E+ G+ +N LL V + E LFK+ +
Sbjct: 114 LVTWMAQASDFDMVKKLLAEVQGKEVRINSFVYNNLLSVLVKQNQVHEAIYLFKEY-LVM 172
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFY-SNGRFAD 216
PD ++N +I+ G +D A + +ME G D++T+NTL+ G +N
Sbjct: 173 QSPPDTWTFNILIRGLCRVGGVDRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRG 232
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
E E + P++ +Y + + G + K+A L EM I P+V TF LI
Sbjct: 233 CELFKEIQSRSDCSPDIVTYTSIISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLID 292
Query: 277 GFVNEGNLEEAKRWYNKSG---CGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV 333
GF GN+ EA+ Y K C + F L+ C G ++ +
Sbjct: 293 GFGKIGNIAEAEAMYRKMAYFDCSADVVTFTSLIDGYCRAGQVNHGLKFWNVMKTRNVSP 352
Query: 334 DQAPLQLVVDRLAKELRVEEAKELVELGKTNS 365
++++ L KE R+ EA++ + K +S
Sbjct: 353 TVYTYAVLINALCKENRLNEARDFLGQIKNSS 384
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 93/224 (41%), Gaps = 14/224 (6%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
S+I G K K K++S+L +GI + F I I E +
Sbjct: 254 SIISGFCKSG-------KMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAM 306
Query: 86 YK-----DISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
Y+ D S + T LI Y +A + K ++ M RN TV ++ L+ A
Sbjct: 307 YRKMAYFDCSADVVTFTSLIDGYCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCK 366
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
+ +E + + I P YN +I F G++D N +L EME+K D +
Sbjct: 367 ENRLNEARDFLGQIKNS-SIIPKPFMYNPVIDGFCKAGNVDEGNVILKEMEEKRCDPDKV 425
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
TF L++G GR +A I+ M+ P+ + N+ + L
Sbjct: 426 TFTILIIGHCVKGRMFEAINIFNRMLATRCAPDNITVNSLISCL 469
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 76/199 (38%), Gaps = 4/199 (2%)
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
+YN ++++ G D N + M G D L+ F +K+ +
Sbjct: 75 TYNLLMRSLCQMGHHDLVNIVFDYMGSDGHLPDSKLLGFLVTWMAQASDFDMVKKLLAEV 134
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
VR N YN L L + Q +A+ L E + PD +TF LI+G G +
Sbjct: 135 QGKEVRINSFVYNNLLSVLVKQNQVHEAIYLFKEYLVMQSPPDTWTFNILIRGLCRVGGV 194
Query: 285 EEAKRWYNKS---GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSER-CLVDQAPLQL 340
+ A + GC + + L+ +C+ ++ L K S C D
Sbjct: 195 DRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTS 254
Query: 341 VVDRLAKELRVEEAKELVE 359
++ K +++EA L E
Sbjct: 255 IISGFCKSGKMKEASNLFE 273
>gi|308044277|ref|NP_001183654.1| uncharacterized protein LOC100502248 [Zea mays]
gi|238013682|gb|ACR37876.1| unknown [Zea mays]
gi|414871016|tpg|DAA49573.1| TPA: hypothetical protein ZEAMMB73_384118 [Zea mays]
Length = 438
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 159/348 (45%), Gaps = 22/348 (6%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
+R + LV S D+ R T+ +++ RL +R +L+
Sbjct: 64 AVRAESDPARIHSLVASALSSHDMPRLHTSRQLFSLATSRLIRLRRADLAASLLDLLLAS 123
Query: 87 KDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEV 146
S G AR ++LY ++A + F P ++ +S +ALL A + + + D++
Sbjct: 124 TPPSP-GLLARALSLYPGP---DDALRAFSSSP--PAARSDVSLSALLSAFLRAGRLDDI 177
Query: 147 DGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRL----DLITFN 202
G+ P S+N ++ A V L +A LL EM K ++ D+I++N
Sbjct: 178 KSTITLAESSHGVAPGRASHNVLLHALVKNSELAAARKLLDEMANKKLKHRPAPDIISYN 237
Query: 203 TLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
T+L G+ + K+ + + N+ PNV +YN R+ + + +T K EL+ M SK
Sbjct: 238 TVLAGYSVQDDEDEFGKLLKEISLSNLEPNVVTYNCRIQWFSKKGETVKGEELLDVMESK 297
Query: 263 EINPDVFTFYALIKGFVNEGNLEEAKRWYNKS------------GCGMNKAIFKLLVPFV 310
EI P+ T+ AL++G+ EGN+ A R + + G + ++ +L +
Sbjct: 298 EIAPNYVTYNALVQGYCKEGNVGAAMRVFKRMKVMKRREGRSDLGVSAHSQVYVVLFRSL 357
Query: 311 CEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
EK L+ A +CK F+ + ++ +V+ L K R EAK++V
Sbjct: 358 VEKEKLNDALWICKSCFAMKAAPPFEAVKGLVEGLVKAGRSTEAKDVV 405
>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 107/209 (51%), Gaps = 4/209 (1%)
Query: 102 YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEP 161
Y A ARK+FD M + C+ V S+N L+ +K+ E LF ++ H+ G+ P
Sbjct: 377 YSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQ-GLTP 435
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
D+VSYNT+I G L A+ L M G DL T++ LL GF G A A +++
Sbjct: 436 DIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLF 495
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
M + ++PN+ YN +D + + K+A +L E+ + + P+V + +I G E
Sbjct: 496 RAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKE 555
Query: 282 GNLEEAK---RWYNKSGCGMNKAIFKLLV 307
G L+EA R + GC N+ + +++
Sbjct: 556 GLLDEALEAFRNMEEDGCPPNEFSYNVII 584
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 123/241 (51%), Gaps = 4/241 (1%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A +F +M C+ V++++ ++ + ++ +E +F + K GI P++ +YN++I
Sbjct: 246 AAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAK-GISPNIFTYNSLI 304
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
+ + A+ +L EM I +++TF+ L+ F G +A + +TM M V
Sbjct: 305 QGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVE 364
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
PNV +Y++ ++G +++ + +A +L M +K PDVF++ LI G+ + EAK+
Sbjct: 365 PNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQL 424
Query: 291 YNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAK 347
+N+ G + + L+ +C+ G L A +L K + L D +++D K
Sbjct: 425 FNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCK 484
Query: 348 E 348
+
Sbjct: 485 Q 485
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 156/335 (46%), Gaps = 7/335 (2%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I G+ K F+K + G + + Y+ + L +R +I + K
Sbjct: 232 TIINGLCKIGETVAAAGLFRKMGEAG-CQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKA 290
Query: 86 YKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
K IS FT LI + + A + +EM N +++F+ L+
Sbjct: 291 -KGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVF 349
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
E G+ K + ++G+EP++V+Y++++ + + + A L M KG + D+ ++N L
Sbjct: 350 EARGVLKTMT-EMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNIL 408
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+ G+ R +A++++ M++ + P++ SYN +DGL + ++A +L M +
Sbjct: 409 INGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGN 468
Query: 265 NPDVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFN 321
PD+ T+ L+ GF +G L +A R + + N ++ +L+ +C+ +L A
Sbjct: 469 LPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARK 528
Query: 322 LCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKE 356
L F + + +++ L KE ++EA E
Sbjct: 529 LFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALE 563
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 113/247 (45%), Gaps = 40/247 (16%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKF-DEVDGLFKDLPHKLGIEPDLVSYN 167
++A F+ M R ++ FN LL A V + + D V L K + G+ PD + +
Sbjct: 103 DDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQM-ELAGLSPDTYTLH 161
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
+I F +D ++L ++ K G++L ++TFNTL+ G G+F A ++++ MV
Sbjct: 162 MLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVAR 221
Query: 228 NVRPNVRSYNARLDG-----------------------------------LAIEKQTKKA 252
+P+V +Y ++G L +++ +A
Sbjct: 222 GYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEA 281
Query: 253 LELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS---GCGMNKAIFKLLVPF 309
L++ M++K I+P++FT+ +LI+G N EA N+ N F LL+
Sbjct: 282 LDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINI 341
Query: 310 VCEKGDL 316
C++G++
Sbjct: 342 FCKEGNV 348
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 36/208 (17%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI Y KA A+++F+EM + ++S+N L+ + E LFK++
Sbjct: 408 LINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTN- 466
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G PDL +Y+ ++ F +G L A L M+ ++ +++ +N L+ + +A
Sbjct: 467 GNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEA 526
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIE------------------------------- 246
K++ + ++PNV+ Y ++GL E
Sbjct: 527 RKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRG 586
Query: 247 ----KQTKKALELVGEMRSKEINPDVFT 270
K +A++L+GEMR K DV T
Sbjct: 587 FLQHKDESRAVQLIGEMREKGFVADVAT 614
>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
Length = 722
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 141/297 (47%), Gaps = 6/297 (2%)
Query: 56 NTGIYTGTVQRLANAKRFRWIEEIL-EHQKQYKDISKEGFTARLIALYGKAAMFENARKV 114
N YT + R R +L E + ++ G+ LI+ K ++A +
Sbjct: 423 NVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNC-LISALCKDEKVQDALNM 481
Query: 115 FDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFV 174
F +M + C+ + +FN+L+ KF+E GL++D+ + G+ + ++YNT+I AF+
Sbjct: 482 FGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLE-GVIANTITYNTLIHAFL 540
Query: 175 DKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVR 234
+G++ A L+ +M +G LD IT+N L+ G ++E M++ + PN
Sbjct: 541 RRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNI 600
Query: 235 SYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK- 293
S N ++GL + ALE + +M + + PD+ T+ +LI G G +EA ++K
Sbjct: 601 SCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKL 660
Query: 294 --SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKE 348
G + + L+ + C++G D A L R + ++ ++V KE
Sbjct: 661 QVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKE 717
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 119/266 (44%), Gaps = 9/266 (3%)
Query: 99 IALYGKAAM--FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHK 156
+ ++G M + AR + +++P N V+ FN L+ V+ + DE + +
Sbjct: 327 VLMHGLCRMGKVDEARMLLNKVPNPN----VVLFNTLINGYVSRGRLDEAKAVMHESMLS 382
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
+G PD+ +YNT+I KG L SA L+ EM+ KG ++IT+ L+ F GR +
Sbjct: 383 VGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEE 442
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
A + + M + N YN + L +++ + AL + G+M SK PD+FTF +LI
Sbjct: 443 ARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIF 502
Query: 277 GFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV 333
G EEA Y G N + L+ +G + A L C +
Sbjct: 503 GLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPL 562
Query: 334 DQAPLQLVVDRLAKELRVEEAKELVE 359
D ++ L + +E+ L E
Sbjct: 563 DDITYNGLIKALCRAGNIEKGLALFE 588
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 153/337 (45%), Gaps = 37/337 (10%)
Query: 59 IYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEM 118
+Y + +L A F+ I+ +L KQ + +E ++ YG+A + A ++ +M
Sbjct: 113 VYYMLIDKLGAAGEFKTIDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDM 172
Query: 119 PG-RNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKG 177
G +CE T S+N +L + V +F ++ K GI P + ++ ++KA
Sbjct: 173 RGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSK-GISPTVYTFGVVMKALCLVN 231
Query: 178 SLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYN 237
+DSA LL +M + G + I + TL+ GR + K+ E M+ M P+V ++N
Sbjct: 232 EVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFN 291
Query: 238 ARLDGLAIEKQTKKALELVGEM-------------------------------RSKEINP 266
+ GL + +A +LV M +K NP
Sbjct: 292 DAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNP 351
Query: 267 DVFTFYALIKGFVNEGNLEEAKRWYNKS----GCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
+V F LI G+V+ G L+EAK ++S GCG + + L+ +C+KG L A L
Sbjct: 352 NVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSAREL 411
Query: 323 CKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ C + +++DR KE R+EEA+ +++
Sbjct: 412 MNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLD 448
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 114/267 (42%), Gaps = 4/267 (1%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K +AR++ +EM + CE V+++ L+ + +E + ++ K G+ +
Sbjct: 401 KKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGK-GLALNA 459
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
V YN +I A + A + +M KG + D+ TFN+L+ G +F +A +++
Sbjct: 460 VGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQD 519
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M+ V N +YN + ++AL+LV +M + D T+ LIK GN
Sbjct: 520 MLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGN 579
Query: 284 LEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL 340
+E+ + G N +L+ +C G++ A + D
Sbjct: 580 IEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNS 639
Query: 341 VVDRLAKELRVEEAKELVELGKTNSYC 367
+++ L K R +EA L + + C
Sbjct: 640 LINGLCKTGRAQEALNLFDKLQVEGIC 666
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 97/206 (47%), Gaps = 7/206 (3%)
Query: 86 YKDISKEGFTAR------LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
Y+D+ EG A LI + + + A K+ ++M R C +++N L+ A
Sbjct: 517 YQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCR 576
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
+ ++ LF+D+ K G+ P+ +S N +I G++ A L +M +G+ D++
Sbjct: 577 AGNIEKGLALFEDMMSK-GLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIV 635
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
T+N+L+ G GR +A +++ + + P+ +YN + E A L+
Sbjct: 636 TYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRG 695
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLE 285
P+ T+Y L+ F+ EG+ E
Sbjct: 696 VDSGFIPNEVTWYILVSNFIKEGDQE 721
>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
Length = 591
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 160/342 (46%), Gaps = 15/342 (4%)
Query: 25 GSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQK 84
G+V+ G+ K+ + ++ D + G + NT YT + +L K
Sbjct: 182 GTVMNGLCKKGHTQKAFDLLRLMEQ-GSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMK 240
Query: 85 QYKDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKF 143
Q K I + FT + LI K + +EN R +F EM N V +FN+++ K
Sbjct: 241 Q-KSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKV 299
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT 203
++ + + + + K G++PD+++YN II + +G +D A + M K I D+I++N
Sbjct: 300 EDAEEIMRYMIEK-GVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNI 358
Query: 204 LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
L+ G+ + +A ++ + ++P++ + N L GL +TK A EM S
Sbjct: 359 LINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAG 418
Query: 264 INPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAF 320
PD++T L+ G+ G +EEA ++K N I+ ++ +C+ G LD A
Sbjct: 419 HIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKA- 477
Query: 321 NLCKRTFSERCLVDQAP----LQLVVDRLAKELRVEEAKELV 358
TF + L+ P ++ +E ++EAK+++
Sbjct: 478 ---HATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDML 516
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 137/268 (51%), Gaps = 1/268 (0%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++IRG++ EN +K V FKK N +Y + L + ++L +Q
Sbjct: 147 TLIRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQ 206
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
+I + K M + A + +EM ++ + +++ L+ A +++
Sbjct: 207 GSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWEN 266
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
V LF ++ H L I P++ ++N++I +G ++ A ++ M +KG+ D+IT+N ++
Sbjct: 267 VRTLFLEMIH-LNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMII 325
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEIN 265
G+ G+ A +I+++M+N ++ P++ SYN ++G A +K+ +A+++ E+ K +
Sbjct: 326 DGYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLK 385
Query: 266 PDVFTFYALIKGFVNEGNLEEAKRWYNK 293
P + T L+ G G + A+ ++++
Sbjct: 386 PSIVTCNVLLHGLFELGRTKSAQNFFDE 413
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 121/272 (44%), Gaps = 9/272 (3%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
++A +F +M +V SF+ LL A V+ K + V LF+++ HKL I +
Sbjct: 53 LDDAFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREI-HKLRIPVHEFILS 111
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
++ + D ++L KKGI + +TF TL+ G ++ + DA +++ +V
Sbjct: 112 IVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRE 171
Query: 228 NV-RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEE 286
N+ PN Y ++GL + T+KA +L+ M P+ T+ +I F +G L+
Sbjct: 172 NICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDG 231
Query: 287 AKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVD 343
A N + + + L+ +C+ + L + V+D
Sbjct: 232 ATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVID 291
Query: 344 RLAKELRVEEAKE----LVELGKTNSYCRYNL 371
L KE +VE+A+E ++E G YN+
Sbjct: 292 GLCKEGKVEDAEEIMRYMIEKGVDPDVITYNM 323
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 110/271 (40%), Gaps = 38/271 (14%)
Query: 56 NTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIA-LYGKAAMFENARKV 114
N + + L + EEI+ + + K + + T +I YG + AR++
Sbjct: 282 NVCTFNSVIDGLCKEGKVEDAEEIMRYMIE-KGVDPDVITYNMIIDGYGLRGQVDRAREI 340
Query: 115 FDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFV 174
FD M ++ E ++S+N L+ KK DE + +++ K G++P +V+ N ++
Sbjct: 341 FDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQK-GLKPSIVTCNVLLHGLF 399
Query: 175 DKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVR 234
+ G SA EM G DL T TLL G++ NG +A + + N++
Sbjct: 400 ELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQ 459
Query: 235 SYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI------------------- 275
Y A +DGL + KA ++ ++PDV T+ A+I
Sbjct: 460 IYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKM 519
Query: 276 ----------------KGFVNEGNLEEAKRW 290
+GF+ + E K +
Sbjct: 520 EDNGCLADNRTYNVIVRGFLRSNKVSEMKAF 550
Score = 44.7 bits (104), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 43/223 (19%), Positives = 91/223 (40%), Gaps = 13/223 (5%)
Query: 77 EEILEHQKQYKDISKEGFTARLIA----LYGKAAMFE-----NARKVFDEMPGRNCEQTV 127
++I E + ++IS++G ++ L+G +FE +A+ FDEM +
Sbjct: 367 KKIDEAMQVCREISQKGLKPSIVTCNVLLHG---LFELGRTKSAQNFFDEMLSAGHIPDL 423
Query: 128 LSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLY 187
+ LLG + +E F L + + ++ Y +I G LD A+
Sbjct: 424 YTHCTLLGGYFKNGLVEEAMSHFHKLERRRE-DTNIQIYTAVIDGLCKNGKLDKAHATFE 482
Query: 188 EMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEK 247
++ G+ D+IT+ ++ G+ G +A+ + M + + R+YN + G
Sbjct: 483 KLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSN 542
Query: 248 QTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
+ + + E+ K + + T L+ + ++ W
Sbjct: 543 KVSEMKAFLEEIAGKSFSFEAATVELLMDIIAEDPSITRKMHW 585
>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
Length = 637
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 150/362 (41%), Gaps = 34/362 (9%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
+ I + + R + F ++SDLG +Y + L + + ++ ++
Sbjct: 91 AAIGAFARAGSADRALKTFYRASDLGCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRK 150
Query: 86 YKDISKEGFTARL-IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
+ +T L I + + ARK+ DEM + C +S ++ + +
Sbjct: 151 -AGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVE 209
Query: 145 EVDGLFKD----------LPHKL-------------------GIEPDLVSYNTIIKAFVD 175
E G + + H L G++P++V+Y TI+ AF
Sbjct: 210 EARGFLAETVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCK 269
Query: 176 KGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRS 235
L A +L M G +++TF L+ GF+ +G+ DA +W MV+ P+ S
Sbjct: 270 ARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTIS 329
Query: 236 YNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK-- 293
YN + GL K AL+ M+ + P+ T+ L+ GF N G+L+ A +N+
Sbjct: 330 YNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMK 389
Query: 294 -SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVE 352
SGC N ++ ++ +C+K D A +L + + C + ++ RL RV
Sbjct: 390 SSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVG 449
Query: 353 EA 354
A
Sbjct: 450 RA 451
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 100/226 (44%), Gaps = 4/226 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+ + A + A +++EM C+ V+ + ++ FD+ + L +
Sbjct: 368 LVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMD- 426
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
P+ V++NT+I D G + A + + M + G + T+N LL G + G DA
Sbjct: 427 NCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDA 486
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ M+N ++ +YN ++ L K A+ L+G M + I PD FTF A+I
Sbjct: 487 FAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHA 546
Query: 278 FVNEGNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAF 320
+ EG + A N C N + +L+ +C +G L A
Sbjct: 547 YCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAM 592
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 115/293 (39%), Gaps = 36/293 (12%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
+IRG+ +LK +D F S N Y+ V +NA I K
Sbjct: 333 LIRGLCCIGDLKGALDFFN-SMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSS 391
Query: 87 KDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLG----------- 135
+I + K MF+ A + D+M NC ++FN L+G
Sbjct: 392 GCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRA 451
Query: 136 ----------AC-VNSKKFDEV-DGLFKDLPHK-----------LGIEPDLVSYNTIIKA 172
C N + ++E+ GLF++ HK G E LV+YNT+I
Sbjct: 452 LNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINC 511
Query: 173 FVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPN 232
A LL M +GI+ D TFN ++ + G+ + A + M +N N
Sbjct: 512 LCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRN 571
Query: 233 VRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG-FVNEGNL 284
V +Y + L + + A+ + +M + I P+ T+ L++ F N G +
Sbjct: 572 VVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAIFTNIGTI 624
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 96/236 (40%), Gaps = 3/236 (1%)
Query: 53 FRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENAR 112
+ N YT V A+ R IL L+ + + +A
Sbjct: 253 LQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDAL 312
Query: 113 KVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIK 171
++ M + +S+N L+ G C +D F + + + P+ +Y+T++
Sbjct: 313 SMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALD--FFNSMKRNALLPNATTYSTLVD 370
Query: 172 AFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRP 231
F + G LD A + EM+ G + +++ + ++ F AE + + M+ N P
Sbjct: 371 GFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPP 430
Query: 232 NVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
N ++N + L + +AL + MR +P+ T+ L+ G EGN ++A
Sbjct: 431 NTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDA 486
>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
Length = 567
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 147/313 (46%), Gaps = 20/313 (6%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIAL-YGKAAMFENARKVFDEM 118
YT V L A+R R ++L+ + K S +T +I + + A+K+ +EM
Sbjct: 115 YTNIVDGLCKAERTRDAVKLLDEMRD-KGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEM 173
Query: 119 PGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGS 178
R V+++N+ + + DE +P + PD+VSY T+I G
Sbjct: 174 AVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMP----VTPDVVSYTTVINGLCKSGD 229
Query: 179 LDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNA 238
LDSA+ +L M +G D++T+++L+ GF G A + ++M+ + RPN+ +YN+
Sbjct: 230 LDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNS 289
Query: 239 RLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SG 295
L L KA +++ EM + PDV ++ A I G +++AK +++ G
Sbjct: 290 LLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERG 349
Query: 296 CGMNKAIFKLLVPFV----------CEKGDLDFAFNLCKRTFSER-CLVDQAPLQLVVDR 344
C N + + +L+ + C+ G D A L + E+ C D +++D
Sbjct: 350 CTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDS 409
Query: 345 LAKELRVEEAKEL 357
K ++++A ++
Sbjct: 410 HCKRRQIDKALQI 422
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 114/251 (45%), Gaps = 1/251 (0%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
+ A VF EM ++C+ +F LL S + ++ L + ++G PD YN
Sbjct: 24 DKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLLGRM-KEMGCVPDDAIYNA 82
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
+I + A L EM K ++T+ ++ G R DA K+ + M +
Sbjct: 83 LISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVKLLDEMRDKG 142
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
PN+ +YN ++GL E++ +A +++ EM + PDV T+ + IKG ++EA+
Sbjct: 143 CSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEAR 202
Query: 289 RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKE 348
++ + + + ++ +C+ GDLD A + + C D ++D K
Sbjct: 203 KFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKG 262
Query: 349 LRVEEAKELVE 359
VE A L++
Sbjct: 263 GEVERAMGLLD 273
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 122/284 (42%), Gaps = 24/284 (8%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
S+I G K ++R + LG R N Y + L E++L
Sbjct: 254 SLIDGFCKGGEVERAMGLLDSMLKLG-CRPNMVAYNSLLGALHRLGHIGKAEDML----- 307
Query: 86 YKDISKEGFTARLIALYG------KAAMFENARKVFDEMPGRNCEQT----------VLS 129
++ + GFT +++ KA + A+ VFD M R C +L
Sbjct: 308 -VEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILL 366
Query: 130 FNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEM 189
+ LL +FDE LF + + EPD+ YN ++ + + +D A + +M
Sbjct: 367 YTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQM 426
Query: 190 EKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQT 249
+K +++T+N L+ G + R +DAE + TMV+ P+ +Y +D + ++
Sbjct: 427 LEKNC-CNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKS 485
Query: 250 KKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK 293
ALEL E PDV T+ ALI G V+E EEA + K
Sbjct: 486 AAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTK 529
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 134/331 (40%), Gaps = 53/331 (16%)
Query: 87 KDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
K + FT A L+ ++ E ARK+ M C +NAL+ +K F +
Sbjct: 36 KSCQPDAFTFAILLRGLCRSNQLEKARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQ 95
Query: 146 -----------------------VDGLFK-----------DLPHKLGIEPDLVSYNTIIK 171
VDGL K D G P++ +YN I++
Sbjct: 96 AFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVE 155
Query: 172 AFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRP 231
++ LD A +L EM +G D++T+N+ + G R +A K + M V P
Sbjct: 156 GLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKF---LARMPVTP 212
Query: 232 NVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY 291
+V SY ++GL A ++ M ++ PDV T+ +LI GF G +E A
Sbjct: 213 DVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLL 272
Query: 292 N---KSGCGMNKAIFKLLVPFVCEKGDL----DFAFNLCKRTFSERCLVDQAPLQLVVDR 344
+ K GC N + L+ + G + D + +R F+ D +D
Sbjct: 273 DSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTP----DVVSYNACIDG 328
Query: 345 LAKELRVEEAK----ELVELGKTNSYCRYNL 371
L K RV++AK +VE G T + Y++
Sbjct: 329 LCKAERVKKAKAVFDRMVERGCTPNASSYSM 359
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 87/205 (42%), Gaps = 3/205 (1%)
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
+G E ++ +YN ++ + D A+ + EM K + D TF LL G + +
Sbjct: 1 MGYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEK 60
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
A K+ M M P+ YNA + G + K +A + + EM P V T+ ++
Sbjct: 61 ARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVD 120
Query: 277 GFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV 333
G +A + ++ GC N + ++V +CE+ LD A + +
Sbjct: 121 GLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFP 180
Query: 334 DQAPLQLVVDRLAKELRVEEAKELV 358
D + L K RV+EA++ +
Sbjct: 181 DVVTYNSFIKGLCKCDRVDEARKFL 205
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 68/152 (44%), Gaps = 4/152 (2%)
Query: 102 YGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIE 160
+ K + A ++ +M +NC V+++N L+ G CV+ + D L + G
Sbjct: 410 HCKRRQIDKALQIHKQMLEKNC-CNVVTWNILVHGLCVDDRLSDAETMLLTMVDE--GFI 466
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
PD V+Y T++ A G +A L E K G D++T++ L+ G +A +
Sbjct: 467 PDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLL 526
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKA 252
+ +V P+ ++ L + + +KA
Sbjct: 527 FTKLVERRWVPDDKTLGLLHRKLKLLNKPRKA 558
>gi|357168491|ref|XP_003581673.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
mitochondrial-like [Brachypodium distachyon]
Length = 392
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 138/284 (48%), Gaps = 10/284 (3%)
Query: 44 FKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYG 103
F+K+ ++ + +Y+ + RLA A+RF +EE+L + K + F RLI +YG
Sbjct: 58 FRKACARRDYKPSEALYSLMIDRLACARRFGDVEELLVRARVEKFRFSDEFFYRLIKMYG 117
Query: 104 KAAMF-ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPD 162
A E A ++ MPG NC + +FN +L V ++++ + +++ P LG+ D
Sbjct: 118 NVANHPERAMEMLYAMPGYNCWPSTKTFNYVLHMLVCKRQYEVIHEVYESAPW-LGVTLD 176
Query: 163 LVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWE 222
+N +IK G D A +LL+EM K+ +++T++TL+ +GR A +++E
Sbjct: 177 TCCFNILIKGLCQFGKFDEAISLLHEMPKQECLPNVVTYSTLMHFLCQHGRVDKAFELFE 236
Query: 223 TMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEG 282
M + + YN + GL E + A ++ M S+ P+ T+ L+ +
Sbjct: 237 RMRKEEIDADTVVYNILISGLCREGKVTIAFDMFKSMSSEGCYPNSGTYQVLLDSLLTSR 296
Query: 283 NLEEAKR---WYNKSGCGMNKAIFKLLVPFVC-----EKGDLDF 318
N EAK + G + + +KLL+ +C E G L F
Sbjct: 297 NFTEAKDLVCMMSAEGLRPSFSSYKLLIDGLCSVNCLEDGHLIF 340
>gi|358347154|ref|XP_003637626.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503561|gb|AES84764.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 989
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 138/264 (52%), Gaps = 4/264 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LIA Y K E + ++ +M V++ +++L K E LF+++ +++
Sbjct: 327 LIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREM-YEM 385
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++P+ VSY TII + G + A L +M +GI D++T T++ G + G+ +A
Sbjct: 386 GLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEA 445
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
E+++ET++ +N+ PN +Y+A LDG + + A ++ +M + + P+V TF ++I G
Sbjct: 446 EEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIING 505
Query: 278 FVNEGNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
+ +G L +A R + N ++ +L+ + G+ D A + CK S R
Sbjct: 506 YAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEES 565
Query: 335 QAPLQLVVDRLAKELRVEEAKELV 358
++++ L + R++EA+ L+
Sbjct: 566 NVIFDILLNNLKRVGRMDEARSLI 589
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 102/243 (41%), Gaps = 7/243 (2%)
Query: 55 TNTGIYTG---TVQRL-ANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFEN 110
T T +Y T+ RL RF H + + F L+ + + +
Sbjct: 53 TKTHLYVSFFCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQ 112
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
+ ++ +M V S N L+ + D G ++ ++ D V+YNT+I
Sbjct: 113 VKLMYSDMLFCGVVPDVFSVNVLVHSLCKVGDLDLALGYLRN---NDVVDIDNVTYNTVI 169
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
F KG +D LL EM K+G+ D IT N L+ G+ G AE + +V+ V
Sbjct: 170 WGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVT 229
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
+V N +DG +A EL+ ++ D+ T+ L+K F G+L A+
Sbjct: 230 KDVIGLNTLIDGYCEAVLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESL 289
Query: 291 YNK 293
+N+
Sbjct: 290 FNE 292
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 112/244 (45%), Gaps = 23/244 (9%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKK-------FDEVDGLF 150
LI Y +A + A ++ + + + ++++N LL A + F+E+ G +
Sbjct: 238 LIDGYCEAVLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFW 297
Query: 151 KDLPHKL------------GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL 198
KD +L ++P LV+Y T+I A+ ++ +++L +M GI D+
Sbjct: 298 KD-EDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDV 356
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
+T +++L GF +G+ +A ++ M M + PN SY ++ L + +A L +
Sbjct: 357 VTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQ 416
Query: 259 MRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGD 315
M + I+ D+ T ++ G G +EA+ + K N + L+ C+ G
Sbjct: 417 MVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGK 476
Query: 316 LDFA 319
++ A
Sbjct: 477 MELA 480
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 99/202 (49%), Gaps = 9/202 (4%)
Query: 96 ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPH 155
A LI Y K A + EM +N V+++NAL+ + K+D + +
Sbjct: 605 ASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMI-- 662
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
+LG+ PD ++YNTII + KG + A +L EM+ GI + +T+N L+ G G F
Sbjct: 663 ELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTG-FV 721
Query: 216 DAEKIWETMVNMNVRP----NVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTF 271
+ +V R + + +L +E + +K ++ EM + I+ D+ T+
Sbjct: 722 PTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELKRQKV--VLDEMVKRGISADLVTY 779
Query: 272 YALIKGFVNEGNLEEAKRWYNK 293
ALI+G+ ++E+A + Y++
Sbjct: 780 NALIRGYCTGSHVEKALKTYSQ 801
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 81/181 (44%), Gaps = 1/181 (0%)
Query: 102 YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEP 161
Y K E A V +M + V++F++++ + + +++ + + P
Sbjct: 471 YCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQR-NVMP 529
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
+ + Y +I + G D A+ EM+ + + + F+ LL GR +A +
Sbjct: 530 NTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLI 589
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
M + + P++ +Y + +DG E AL +V EM+ K I DV + ALIKG +
Sbjct: 590 IDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRL 649
Query: 282 G 282
G
Sbjct: 650 G 650
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 88/207 (42%), Gaps = 52/207 (25%)
Query: 129 SFNALLGACVNSKKFDEV------DGLFK-----------DLPHKLGIEPDLVSYNTIIK 171
+FN V FD V DGLFK + KL + P+ V+Y+ ++
Sbjct: 410 AFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLD 469
Query: 172 AFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRP 231
+ G ++ A +L +MEK+ + ++ITF++++ G+ G + A + MV NV P
Sbjct: 470 GYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMP 529
Query: 232 NVRSYNARLDG------------LAIEKQTKK-----------------------ALELV 256
N Y +DG E ++++ A L+
Sbjct: 530 NTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLI 589
Query: 257 GEMRSKEINPDVFTFYALIKGFVNEGN 283
+M SK I+PD+ + +LI G+ EGN
Sbjct: 590 IDMYSKGIDPDIVNYASLIDGYFKEGN 616
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 94/224 (41%), Gaps = 22/224 (9%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ D++ NT+I + + + A L+ + +++D++T+NTLL F G A
Sbjct: 227 GVTKDVIGLNTLIDGYCEAVLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRA 286
Query: 218 EKIWETMVNM-------------------NVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
E ++ ++ N++P + +Y + +++ L +
Sbjct: 287 ESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKK 346
Query: 259 MRSKEINPDVFTFYALIKGFVNEGNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKGD 315
M I PDV T +++ GF G L EA R + G N + ++ + + G
Sbjct: 347 MIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGR 406
Query: 316 LDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ AFNL + D V+D L K + +EA+E+ E
Sbjct: 407 VMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFE 450
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 84/196 (42%), Gaps = 38/196 (19%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
E+A + +EM +++N L+G K G P +++
Sbjct: 687 EDALDILNEMKSYGIMPNAVTYNILIGGLC-----------------KTGFVPTPITHKF 729
Query: 169 IIKAF----------------VDKG-SLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSN 211
++KA+ V G L +L EM K+GI DL+T+N L+ G+ +
Sbjct: 730 LVKAYSRSEKADKILQIHEKLVASGLELKRQKVVLDEMVKRGISADLVTYNALIRGYCTG 789
Query: 212 GRFADAEKIWETMVNMNVRPNVRSYNARLDGLA----IEKQTKKALELVGEMRSKEINPD 267
A K + M + PN+ +YN L GL+ +E+ ++ +LV EM + + P+
Sbjct: 790 SHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPN 849
Query: 268 VFTFYALIKGFVNEGN 283
T+ L+ G+ GN
Sbjct: 850 AATYDILVSGYGRVGN 865
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 92/194 (47%), Gaps = 19/194 (9%)
Query: 112 RKVFDEMPGRNCEQTVLSFNALL-GACVNS---KKFDEVDGLFKDLPHKLGIEPDLVSYN 167
+ V DEM R ++++NAL+ G C S K +F D GI P++ +YN
Sbjct: 761 KVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVD-----GIAPNITTYN 815
Query: 168 TIIKAFVDKG----SLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
T++ + G ++ L+ EM ++G+ + T++ L+ G+ GR + +K
Sbjct: 816 TLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGY---GRVGNRKKTIIL 872
Query: 224 MVNMNVR---PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
+ M + P +++YN + A + +A EL+ ++ +K P+ FT+ L G++N
Sbjct: 873 HIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDILTCGWLN 932
Query: 281 EGNLEEAKRWYNKS 294
E R +S
Sbjct: 933 LSYEPEIDRSLKRS 946
Score = 44.3 bits (103), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 88/198 (44%), Gaps = 13/198 (6%)
Query: 80 LEHQKQYKD-ISKEGFTARLIAL------YGKAAMFENARKVFDEMPGRNCEQTVLSFNA 132
L+ QK D + K G +A L+ Y + E A K + +M + ++N
Sbjct: 757 LKRQKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNT 816
Query: 133 LLGACVNSKKFDEVDGLFKDLPHKL---GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEM 189
LLG N+ +E+ + L ++ G+ P+ +Y+ ++ + G+ L EM
Sbjct: 817 LLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEM 876
Query: 190 EKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDG---LAIE 246
KG L T+N L+ + +G+ +A ++ ++ PN +Y+ G L+ E
Sbjct: 877 ITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDILTCGWLNLSYE 936
Query: 247 KQTKKALELVGEMRSKEI 264
+ ++L+ E+ K++
Sbjct: 937 PEIDRSLKRSYEIEVKKL 954
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 89/202 (44%), Gaps = 15/202 (7%)
Query: 166 YNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMV 225
+ T+I+ ++ +A+ M G+ L +NTLL F ++G + + ++ M+
Sbjct: 62 FCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDML 121
Query: 226 NMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE-INPDVFTFYALIKGFVNEGNL 284
V P+V S N + L AL G +R+ + ++ D T+ +I GF +G +
Sbjct: 122 FCGVVPDVFSVNVLVHSLCKVGDLDLAL---GYLRNNDVVDIDNVTYNTVIWGFCQKGLV 178
Query: 285 EEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFA----FNLCKRTFSERCLVDQAP 337
++ + K G + +LV C G + +A +NL ++ D
Sbjct: 179 DQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTK----DVIG 234
Query: 338 LQLVVDRLAKELRVEEAKELVE 359
L ++D + + + +A EL+E
Sbjct: 235 LNTLIDGYCEAVLMSQATELIE 256
>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
Length = 457
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 128/276 (46%), Gaps = 16/276 (5%)
Query: 56 NTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTAR------LIALYGKAAMFE 109
NT Y ++ L A+RF E + ++ ++ +G + LIA + +
Sbjct: 51 NTYTYGYLLRSLCQAQRFE------EARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVD 104
Query: 110 NARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTI 169
A ++ +EM + V+++ +LL K E LF + ++ G PD V YN +
Sbjct: 105 EAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYR-GCPPDGVVYNVL 163
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
I F KG + A L EM +KG + T+N+LL GF G F + +++ M+
Sbjct: 164 IDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGC 223
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
PN+ ++N LDG +A L EMRS PDV ++ LI+G ++G EA+R
Sbjct: 224 VPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQR 283
Query: 290 WYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
+SG G + + +L+ + G LD A L
Sbjct: 284 LLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKL 319
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 123/263 (46%), Gaps = 4/263 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K A ++F+EM + C TV ++N+LL +F V LFKD+ +
Sbjct: 163 LIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQ- 221
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G P++ ++N ++ F G + A+ L EM G D++++NTL+ G S G+ +A
Sbjct: 222 GCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEA 281
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+++ M+ V P++ SYN +DG + A++L E+ + PD F++ +I
Sbjct: 282 QRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDC 341
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
G + A + +G + A+ LV +C L + L + C+
Sbjct: 342 LCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPL 401
Query: 335 QAPLQLVVDRLAKELRVEEAKEL 357
L++ +L K R ++ E+
Sbjct: 402 IPEYNLLMYKLCKAKRSDDVCEI 424
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 119/264 (45%), Gaps = 4/264 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+ + K+ ++ +++M C ++ LL + +++F+E +F+ + +
Sbjct: 23 LLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQ- 81
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G P++ SY+ +I +D A LL EM G + +++T+ +LL G G+ +A
Sbjct: 82 GCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEA 141
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ MV P+ YN +DG + + +A L EM K P VFT+ +L+ G
Sbjct: 142 VDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSG 201
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
F +G + + + GC N F L+ C+ GD+ A L S C D
Sbjct: 202 FSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPD 261
Query: 335 QAPLQLVVDRLAKELRVEEAKELV 358
++ + + + EA+ L+
Sbjct: 262 VVSYNTLIRGMCSKGKPHEAQRLL 285
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 104/236 (44%), Gaps = 4/236 (1%)
Query: 125 QTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANT 184
LS+N LL S + D V G + D+ G P+ +Y ++++ + A +
Sbjct: 15 HGTLSYNYLLEVLAKSGRCDHVYGTYNDM-LAAGCVPNTYTYGYLLRSLCQAQRFEEARS 73
Query: 185 LLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLA 244
+ M +G ++ +++ L+ G + +A ++ M++ +PNV +Y + L GL
Sbjct: 74 VFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLC 133
Query: 245 IEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKA 301
+ K+A++L M + PD + LI GF +G++ EA R + + GC
Sbjct: 134 KMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVF 193
Query: 302 IFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
+ L+ KG+ +L K + C+ + ++D K + EA L
Sbjct: 194 TYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRL 249
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 1/160 (0%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
A+++ EM ++S+N L+ S D LF ++P K G+EPD SY+T
Sbjct: 279 HEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIP-KSGLEPDAFSYST 337
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
II G + +A + +M G D L++G R ++ ++++ MV
Sbjct: 338 IIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFE 397
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDV 268
P + YN + L K++ E+ E+ + +PDV
Sbjct: 398 CVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDV 437
>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 584
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 118/228 (51%), Gaps = 4/228 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I + + A ++F+E+ NCE TV+++ L+ A + D L ++ K
Sbjct: 179 MIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSK- 237
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+EPD ++YN II+ + +D A LL + +G + D+IT+N LL S G++++
Sbjct: 238 GLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEG 297
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
EK+ M+++ +PNV +++ + L + + ++A+ L+ M+ K + PD + + LI G
Sbjct: 298 EKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAG 357
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
F EG L+ A + GC + + ++ +C G D A +
Sbjct: 358 FCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEV 405
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 105/233 (45%), Gaps = 5/233 (2%)
Query: 55 TNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKV 114
T I G + + K F + L + DI R + GK + K+
Sbjct: 245 TYNAIIRGMCKEMMVDKAFELLRS-LSSRGCKPDIITYNILLRTLLSRGK---WSEGEKL 300
Query: 115 FDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFV 174
EM C+ V++ + L+G K +E L + + K G++PD Y+ +I F
Sbjct: 301 ISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEK-GLKPDAYCYDPLIAGFC 359
Query: 175 DKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVR 234
+G LD A L M G D++ +NT++ G G+ A +++E + + PNV
Sbjct: 360 REGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVS 419
Query: 235 SYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
SYN L +ALE++ ++ ++ I+PD T+ +LI +G ++EA
Sbjct: 420 SYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEA 472
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 109/252 (43%), Gaps = 42/252 (16%)
Query: 158 GIEPDLVSY----------------------------------NTIIKAFVDKGSLDSAN 183
G PD++ N +I F+ L++AN
Sbjct: 99 GYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYGKPDVFAYNALISGFIKANQLENAN 158
Query: 184 TLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
+L M+ +G D++T+N ++ F S G+ A +I+E ++ N P V +Y ++
Sbjct: 159 RVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEAT 218
Query: 244 AIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA---KRWYNKSGCGMNK 300
++ A++L+ EM SK + PD T+ A+I+G E +++A R + GC +
Sbjct: 219 ILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDI 278
Query: 301 AIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV-- 358
+ +L+ + +G L S C + +++ L ++ +VEEA L+
Sbjct: 279 ITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRS 338
Query: 359 --ELG-KTNSYC 367
E G K ++YC
Sbjct: 339 MKEKGLKPDAYC 350
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 54/123 (43%), Gaps = 4/123 (3%)
Query: 212 GRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTF 271
G++ ++ E MV+ P+V + G + KA V E+ + PDVF +
Sbjct: 83 GKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATR-VMEILERYGKPDVFAY 141
Query: 272 YALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFS 328
ALI GF+ LE A R ++ G + + +++ C +G LD A + +
Sbjct: 142 NALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLK 201
Query: 329 ERC 331
+ C
Sbjct: 202 DNC 204
>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 347
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 141/297 (47%), Gaps = 6/297 (2%)
Query: 56 NTGIYTGTVQRLANAKRFRWIEEIL-EHQKQYKDISKEGFTARLIALYGKAAMFENARKV 114
N YT + R R +L E + ++ G+ LI+ K ++A +
Sbjct: 48 NVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNC-LISALCKDEKVQDALNM 106
Query: 115 FDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFV 174
F +M + C+ + +FN+L+ KF+E GL++D+ + G+ + ++YNT+I AF+
Sbjct: 107 FGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLE-GVIANTITYNTLIHAFL 165
Query: 175 DKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVR 234
+G++ A L+ +M +G LD IT+N L+ G ++E M++ + PN
Sbjct: 166 RRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNI 225
Query: 235 SYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK- 293
S N ++GL + ALE + +M + + PD+ T+ +LI G G +EA ++K
Sbjct: 226 SCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKL 285
Query: 294 --SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKE 348
G + + L+ + C++G D A L R + ++ ++V KE
Sbjct: 286 QVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKE 342
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 92/207 (44%), Gaps = 3/207 (1%)
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
+G PD+ +YNT+I KG L SA L+ EM+ KG ++IT+ L+ F GR
Sbjct: 7 SVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLE 66
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
+A + + M + N YN + L +++ + AL + G+M SK PD+FTF +LI
Sbjct: 67 EARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLI 126
Query: 276 KGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCL 332
G EEA Y G N + L+ +G + A L C
Sbjct: 127 FGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCP 186
Query: 333 VDQAPLQLVVDRLAKELRVEEAKELVE 359
+D ++ L + +E+ L E
Sbjct: 187 LDDITYNGLIKALCRAGNIEKGLALFE 213
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 116/273 (42%), Gaps = 4/273 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI K +AR++ +EM + CE V+++ L+ + +E + ++ K
Sbjct: 20 LILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGK- 78
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ + V YN +I A + A + +M KG + D+ TFN+L+ G +F +A
Sbjct: 79 GLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEA 138
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+++ M+ V N +YN + ++AL+LV +M + D T+ LIK
Sbjct: 139 LGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKA 198
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
GN+E+ + G N +L+ +C G++ A + D
Sbjct: 199 LCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPD 258
Query: 335 QAPLQLVVDRLAKELRVEEAKELVELGKTNSYC 367
+++ L K R +EA L + + C
Sbjct: 259 IVTYNSLINGLCKTGRAQEALNLFDKLQVEGIC 291
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 97/206 (47%), Gaps = 7/206 (3%)
Query: 86 YKDISKEGFTAR------LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
Y+D+ EG A LI + + + A K+ ++M R C +++N L+ A
Sbjct: 142 YQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCR 201
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
+ ++ LF+D+ K G+ P+ +S N +I G++ A L +M +G+ D++
Sbjct: 202 AGNIEKGLALFEDMMSK-GLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIV 260
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
T+N+L+ G GR +A +++ + + P+ +YN + E A L+
Sbjct: 261 TYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRG 320
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLE 285
P+ T+Y L+ F+ EG+ E
Sbjct: 321 VDSGFIPNEVTWYILVSNFIKEGDQE 346
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 69/143 (48%), Gaps = 3/143 (2%)
Query: 220 IWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFV 279
+ E+M+++ P++ +YN + GL + A EL+ EM+ K P+V T+ LI F
Sbjct: 1 MHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFC 60
Query: 280 NEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQA 336
EG LEEA+ ++ G +N + L+ +C+ + A N+ S+ C D
Sbjct: 61 KEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIF 120
Query: 337 PLQLVVDRLAKELRVEEAKELVE 359
++ L K + EEA L +
Sbjct: 121 TFNSLIFGLCKVNKFEEALGLYQ 143
>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 740
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 141/297 (47%), Gaps = 6/297 (2%)
Query: 56 NTGIYTGTVQRLANAKRFRWIEEIL-EHQKQYKDISKEGFTARLIALYGKAAMFENARKV 114
N YT + R R +L E + ++ G+ LI+ K ++A +
Sbjct: 441 NVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNC-LISALCKDEKVQDALNM 499
Query: 115 FDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFV 174
F +M + C+ + +FN+L+ KF+E GL++D+ + G+ + ++YNT+I AF+
Sbjct: 500 FGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLE-GVIANTITYNTLIHAFL 558
Query: 175 DKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVR 234
+G++ A L+ +M +G LD IT+N L+ G ++E M++ + PN
Sbjct: 559 RRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNI 618
Query: 235 SYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK- 293
S N ++GL + ALE + +M + + PD+ T+ +LI G G +EA ++K
Sbjct: 619 SCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKL 678
Query: 294 --SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKE 348
G + + L+ + C++G D A L R + ++ ++V KE
Sbjct: 679 QVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKE 735
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 119/266 (44%), Gaps = 9/266 (3%)
Query: 99 IALYGKAAM--FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHK 156
+ ++G M + AR + +++P N V+ FN L+ V+ + DE + +
Sbjct: 345 VLMHGLCRMGKVDEARMLLNKVPNPN----VVLFNTLINGYVSRGRLDEAKAVMHESMLS 400
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
+G PD+ +YNT+I KG L SA L+ EM+ KG ++IT+ L+ F GR +
Sbjct: 401 VGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEE 460
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
A + + M + N YN + L +++ + AL + G+M SK PD+FTF +LI
Sbjct: 461 ARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIF 520
Query: 277 GFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV 333
G EEA Y G N + L+ +G + A L C +
Sbjct: 521 GLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPL 580
Query: 334 DQAPLQLVVDRLAKELRVEEAKELVE 359
D ++ L + +E+ L E
Sbjct: 581 DDITYNGLIKALCRAGNIEKGLALFE 606
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 152/337 (45%), Gaps = 37/337 (10%)
Query: 59 IYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEM 118
+Y + +L A F+ + +L KQ + +E ++ YG+A + A ++ +M
Sbjct: 131 VYYMLIDKLGAAGEFKTTDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDM 190
Query: 119 PG-RNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKG 177
G +CE T S+N +L + V +F ++ K GI P + ++ ++KA
Sbjct: 191 RGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSK-GISPTVYTFGVVMKALCLVN 249
Query: 178 SLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYN 237
+DSA LL +M + G + I + TL+ GR + K+ E M+ M P+V ++N
Sbjct: 250 EVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFN 309
Query: 238 ARLDGLAIEKQTKKALELVGEM-------------------------------RSKEINP 266
+ GL + +A +LV M +K NP
Sbjct: 310 DAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNP 369
Query: 267 DVFTFYALIKGFVNEGNLEEAKRWYNKS----GCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
+V F LI G+V+ G L+EAK ++S GCG + + L+ +C+KG L A L
Sbjct: 370 NVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSAREL 429
Query: 323 CKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ C + +++DR KE R+EEA+ +++
Sbjct: 430 MNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLD 466
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 114/267 (42%), Gaps = 4/267 (1%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K +AR++ +EM + CE V+++ L+ + +E + ++ K G+ +
Sbjct: 419 KKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGK-GLALNA 477
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
V YN +I A + A + +M KG + D+ TFN+L+ G +F +A +++
Sbjct: 478 VGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQD 537
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M+ V N +YN + ++AL+LV +M + D T+ LIK GN
Sbjct: 538 MLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGN 597
Query: 284 LEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL 340
+E+ + G N +L+ +C G++ A + D
Sbjct: 598 IEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNS 657
Query: 341 VVDRLAKELRVEEAKELVELGKTNSYC 367
+++ L K R +EA L + + C
Sbjct: 658 LINGLCKTGRAQEALNLFDKLQVEGIC 684
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 97/206 (47%), Gaps = 7/206 (3%)
Query: 86 YKDISKEGFTAR------LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
Y+D+ EG A LI + + + A K+ ++M R C +++N L+ A
Sbjct: 535 YQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCR 594
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
+ ++ LF+D+ K G+ P+ +S N +I G++ A L +M +G+ D++
Sbjct: 595 AGNIEKGLALFEDMMSK-GLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIV 653
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
T+N+L+ G GR +A +++ + + P+ +YN + E A L+
Sbjct: 654 TYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRG 713
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLE 285
P+ T+Y L+ F+ EG+ E
Sbjct: 714 VDSGFIPNEVTWYILVSNFIKEGDQE 739
>gi|224133034|ref|XP_002327945.1| predicted protein [Populus trichocarpa]
gi|222837354|gb|EEE75733.1| predicted protein [Populus trichocarpa]
Length = 1450
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 133/262 (50%), Gaps = 7/262 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
++A+ GKA A +VF + E TV +NA++G S KF++V LF DL +
Sbjct: 228 ILAVLGKANQEPLAVEVFTRAEP-SVENTVKVYNAMMGVYARSGKFNKVQELF-DLMRER 285
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDS--ANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
G EPDLVS+NT+I A + G + A LL E+ + G+R D+IT+NTL+
Sbjct: 286 GCEPDLVSFNTLINARLKAGEMTPNLAIELLTEVRRSGLRPDIITYNTLISACSRASNLE 345
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
+A +++ MV + P++ +YNA + + KA +L ++ S+ PD ++ + +
Sbjct: 346 EAVNVFDDMVAHHCEPDLWTYNAMISVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSFL 405
Query: 276 KGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCL 332
F EGN+E+ K K G G ++ + ++ ++G D A L + S
Sbjct: 406 YAFAREGNVEKVKDICEEMVKIGFGKDEMTYNTMIHMYGKQGQNDLALQLYRDMKSSGRN 465
Query: 333 VDQAPLQLVVDRLAKELRVEEA 354
D +++D L K ++EEA
Sbjct: 466 PDVITYTVLIDSLGKTNKIEEA 487
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 121/237 (51%), Gaps = 17/237 (7%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL---GACVNSKKFDEVDGLFKDLP 154
LI+ +A+ E A VFD+M +CE + ++NA++ G C S K ++ LF DL
Sbjct: 334 LISACSRASNLEEAVNVFDDMVAHHCEPDLWTYNAMISVYGRCGLSGKAEQ---LFNDLE 390
Query: 155 HKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRF 214
+ G PD VSYN+ + AF +G+++ + EM K G D +T+NT++ + G+
Sbjct: 391 SR-GFFPDAVSYNSFLYAFAREGNVEKVKDICEEMVKIGFGKDEMTYNTMIHMYGKQGQN 449
Query: 215 ADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYAL 274
A +++ M + P+V +Y +D L + ++A ++ EM + + P + T+ AL
Sbjct: 450 DLALQLYRDMKSSGRNPDVITYTVLIDSLGKTNKIEEAAGMMSEMLNTGVKPTLRTYSAL 509
Query: 275 IKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFS 328
I G+ G EA+ ++ +SG ++ + +++ D+ FN KR +
Sbjct: 510 ICGYAKAGKPVEAEETFDCMLRSGTRPDQLAYSVML-------DIHLRFNEPKRAMT 559
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/294 (19%), Positives = 120/294 (40%), Gaps = 37/294 (12%)
Query: 51 GRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFEN 110
G N +Y ++ K ++ E + + +Q LI Y + +E
Sbjct: 774 GTVLNNISVYVDVIEAYGRLKLWQKAESVAGNMRQSCITVNRKVWNALIEAYAASGCYER 833
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLP---------------- 154
AR VF+ M TV S N LL A + + +E+ + ++L
Sbjct: 834 ARAVFNTMMKDGPSPTVDSINGLLQALIVDGRLEELYVVVQELQDIGFKISKSSILLMLD 893
Query: 155 ---------------HKL---GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRL 196
H + G P + Y + + + +L EME+ G +
Sbjct: 894 AFARAGNIFEVKKIYHGMKAAGYFPSMHLYRVMAQLLCRGKQVRDVEAMLSEMEEAGFKP 953
Query: 197 DLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELV 256
DL +N++L + + F +I++ + + P+ +YN + + + K+ L L+
Sbjct: 954 DLSIWNSVLKMYVAIDDFRKTTQIYQRIKEDGLEPDEDTYNILIVMYCRDHRPKEGLVLM 1013
Query: 257 GEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLV 307
EMR+ + P + T+ +L+ F + +E+A+ + + +GC ++++ + +++
Sbjct: 1014 DEMRTVGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQSTGCKLDRSFYHIMM 1067
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/225 (16%), Positives = 99/225 (44%), Gaps = 1/225 (0%)
Query: 59 IYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEM 118
+Y Q L K+ R +E +L ++ ++ +Y F +++ +
Sbjct: 922 LYRVMAQLLCRGKQVRDVEAMLSEMEEAGFKPDLSIWNSVLKMYVAIDDFRKTTQIYQRI 981
Query: 119 PGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGS 178
E ++N L+ + E L ++ +G+EP L +Y +++ +F +
Sbjct: 982 KEDGLEPDEDTYNILIVMYCRDHRPKEGLVLMDEM-RTVGLEPKLDTYKSLVASFGKQQL 1040
Query: 179 LDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNA 238
++ A L E++ G +LD ++ ++ + ++G + A++++ M + V P + + +
Sbjct: 1041 VEQAEELFEELQSTGCKLDRSFYHIMMKIYRNSGSHSKAQRLFSMMKDEGVEPTIATMHL 1100
Query: 239 RLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
+ Q ++A +++ ++ + N + ++I +V G+
Sbjct: 1101 LMVSYGSSGQPQEAEKVLSNLKETDANLSTLPYSSVIDAYVRNGD 1145
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/272 (18%), Positives = 115/272 (42%), Gaps = 6/272 (2%)
Query: 53 FRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENAR 112
F+ + I+ ++ FR +I + K+ E LI +Y + +
Sbjct: 951 FKPDLSIWNSVLKMYVAIDDFRKTTQIYQRIKEDGLEPDEDTYNILIVMYCRDHRPKEGL 1010
Query: 113 KVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKA 172
+ DEM E + ++ +L+ + + ++ + LF++L G + D Y+ ++K
Sbjct: 1011 VLMDEMRTVGLEPKLDTYKSLVASFGKQQLVEQAEELFEEL-QSTGCKLDRSFYHIMMKI 1069
Query: 173 FVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPN 232
+ + GS A L M+ +G+ + T + L++ + S+G+ +AEK+ + + +
Sbjct: 1070 YRNSGSHSKAQRLFSMMKDEGVEPTIATMHLLMVSYGSSGQPQEAEKVLSNLKETDANLS 1129
Query: 233 VRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN 292
Y++ +D ++ + +++ + + PD + I+ + EA N
Sbjct: 1130 TLPYSSVIDAYVRNGDYNAGIQKLKQVKEEGLEPDHRIWTCFIRAASLSQHTSEAILLLN 1189
Query: 293 KSGCGMNKAIFKLLVPFVCEKGD-LDFAFNLC 323
+ F L + + EK + L A +LC
Sbjct: 1190 ----ALRDTGFDLPIRLLTEKPEPLVSALDLC 1217
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/273 (18%), Positives = 108/273 (39%), Gaps = 40/273 (14%)
Query: 78 EILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGAC 137
++LE K++ S + T L+ + KA + A K + + F AL+ C
Sbjct: 660 DLLELLKEHTPRSSQMITEALVVMLCKAQQLDTALKEYSNSRELGFTGSFTMFEALIQCC 719
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLD 197
+ ++ F E +F D+ GI+ Y +++ + G ++A+ L+ E G L+
Sbjct: 720 LENELFTEASQVFSDM-RFCGIKASECLYQSMMLLYCKMGFPETAHHLIDLTETDGTVLN 778
Query: 198 LIT------------------------------------FNTLLLGFYSNGRFADAEKIW 221
I+ +N L+ + ++G + A ++
Sbjct: 779 NISVYVDVIEAYGRLKLWQKAESVAGNMRQSCITVNRKVWNALIEAYAASGCYERARAVF 838
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
TM+ P V S N L L ++ + ++ +V E++ + ++ F
Sbjct: 839 NTMMKDGPSPTVDSINGLLQALIVDGRLEELYVVVQELQDIGFKISKSSILLMLDAFARA 898
Query: 282 GNLEEAKRWYN---KSGCGMNKAIFKLLVPFVC 311
GN+ E K+ Y+ +G + +++++ +C
Sbjct: 899 GNIFEVKKIYHGMKAAGYFPSMHLYRVMAQLLC 931
>gi|255660890|gb|ACU25614.1| pentatricopeptide repeat-containing protein [Glandularia
microphylla]
Length = 484
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 130/285 (45%), Gaps = 34/285 (11%)
Query: 73 FRWIEE--ILEHQKQYK---------------------DISKEGFT------ARLIALYG 103
FRW+E + EH ++ D+ K+G +I YG
Sbjct: 32 FRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYG 91
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K + + + K+F +M E+T+ S+NAL + ++ F + + GIEP
Sbjct: 92 KQGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSE-GIEPTR 150
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
++N +I F G +++AN +M+ + I D++T+NT++ G+Y + +AEK +
Sbjct: 151 HTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVE 210
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M N+ P V +Y + G Q AL LV EM+ I P+ T+ L+ G N
Sbjct: 211 MKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEK 270
Query: 284 LEEA----KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCK 324
+ EA K +K + +IF L+ C+ G+LD A ++ K
Sbjct: 271 MSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLK 315
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 97/230 (42%), Gaps = 46/230 (20%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I Y + E A K F EM GRN E TV+++ L+ V+ + D+ L +++
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEM-KGF 249
Query: 158 GIEPDLVSYNT----------------IIKAFVDK--------------------GSLDS 181
GI+P+ ++Y+T I+K +DK G+LD+
Sbjct: 250 GIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDA 309
Query: 182 ANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV--RPNV------ 233
A +L M + + + + L+ F G++ A K+ + ++ ++ RP
Sbjct: 310 AADVLKAMVRLSVPTEAGHYGVLIENFCKAGQYDKAVKLLDKLIEKDIILRPQSTLHLEP 369
Query: 234 RSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
+YN ++ L Q KA LV ++ + D LI+G EG+
Sbjct: 370 SAYNPMIEYLCNNGQAAKAETLVRQLLKLGVQ-DPTALNTLIRGHSQEGS 418
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/215 (19%), Positives = 94/215 (43%), Gaps = 17/215 (7%)
Query: 37 LKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTA 96
LK ++DK+ +D I+ + + ++L+ + ++ G
Sbjct: 278 LKEMMDKYLAPTD-------NSIFMRLISSHCKSGNLDAAADVLKAMVRLSVPTEAGHYG 330
Query: 97 RLIALYGKAAMFENARKVFDEM--------PGRNCEQTVLSFNALLGACVNSKKFDEVDG 148
LI + KA ++ A K+ D++ P ++N ++ N+ + + +
Sbjct: 331 VLIENFCKAGQYDKAVKLLDKLIEKDIILRPQSTLHLEPSAYNPMIEYLCNNGQAAKAET 390
Query: 149 LFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
L + L KLG++ D + NT+I+ +GS DS LL M ++ + + +N+L+ +
Sbjct: 391 LVRQLL-KLGVQ-DPTALNTLIRGHSQEGSPDSXFELLKIMLRRKVDSEKSAYNSLVQSY 448
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
ADA+ ++M+ + P+ + + ++ L
Sbjct: 449 LKKNEPADAKAALDSMIENDHLPDSSLFRSVMESL 483
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 98/250 (39%), Gaps = 17/250 (6%)
Query: 39 RLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEIL-EHQKQYKDISKEGFTAR 97
RLV++ K + N Y+ + L NA++ IL E +Y + R
Sbjct: 241 RLVEEMKGFG----IKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMR 296
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHK- 156
LI+ + K+ + A V M + + L+ + ++D+ L L K
Sbjct: 297 LISSHCKSGNLDAAADVLKAMVRLSVPTEAGHYGVLIENFCKAGQYDKAVKLLDKLIEKD 356
Query: 157 --------LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
L +EP +YN +I+ + G A TL+ ++ K G++ D NTL+ G
Sbjct: 357 IILRPQSTLHLEPS--AYNPMIEYLCNNGQAAKAETLVRQLLKLGVQ-DPTALNTLIRGH 413
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDV 268
G ++ + M+ V +YN+ + + + A + M + PD
Sbjct: 414 SQEGSPDSXFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPADAKAALDSMIENDHLPDS 473
Query: 269 FTFYALIKGF 278
F ++++
Sbjct: 474 SLFRSVMESL 483
>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g64583, mitochondrial; Flags: Precursor
gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
Length = 512
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 138/275 (50%), Gaps = 8/275 (2%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFT-ARLIALYGKAAMFENARKVFDEM 118
+T + AN +R+ + + + Y IS + ++ LI + + + A V +M
Sbjct: 74 FTRLLTATANLRRYETVIYFSQKMELY-GISHDLYSFTILIHCFCRCSRLSFALSVLGKM 132
Query: 119 PGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKG 177
E ++++F +LL G C+ ++ D + L K G EP++V YNT+I G
Sbjct: 133 MKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVI--LMVKSGYEPNVVVYNTLIDGLCKNG 190
Query: 178 SLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYN 237
L+ A LL EMEKKG+ D++T+NTLL G +GR++DA ++ M+ ++ P+V ++
Sbjct: 191 ELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFT 250
Query: 238 ARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KS 294
A +D + +A EL EM ++P+ T+ ++I G G L +AK+ ++
Sbjct: 251 ALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASK 310
Query: 295 GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSE 329
GC N + L+ C+ +D L +R E
Sbjct: 311 GCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCE 345
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 118/250 (47%), Gaps = 4/250 (1%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A ++ +EM + V+++N LL S ++ + + +D+ K I PD+V++ +I
Sbjct: 195 ALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDM-MKRSINPDVVTFTALI 253
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
FV +G+LD A L EM + + + +T+N+++ G +GR DA+K ++ M +
Sbjct: 254 DVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCF 313
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR- 289
PNV +YN + G + + ++L M + N D+FT+ LI G+ G L A
Sbjct: 314 PNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDI 373
Query: 290 --WYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAK 347
W + +L+ +C G+++ A + +++ L K
Sbjct: 374 FCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCK 433
Query: 348 ELRVEEAKEL 357
+VE+A EL
Sbjct: 434 ADKVEKAWEL 443
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 112/256 (43%), Gaps = 4/256 (1%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
FE+A +F EM +++ F LL A N ++++ V F GI DL S+
Sbjct: 52 FEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVI-YFSQKMELYGISHDLYSFT 110
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
+I F L A ++L +M K G ++TF +LL GF R DA + MV
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS 170
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
PNV YN +DGL + ALEL+ EM K + DV T+ L+ G G +A
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDA 230
Query: 288 KRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDR 344
R K + F L+ ++G+LD A L K + +++
Sbjct: 231 ARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIING 290
Query: 345 LAKELRVEEAKELVEL 360
L R+ +AK+ +L
Sbjct: 291 LCMHGRLYDAKKTFDL 306
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 80/178 (44%), Gaps = 1/178 (0%)
Query: 110 NARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTI 169
+A+K FD M + C V+++N L+ + DE LF+ + + G D+ +YNT+
Sbjct: 299 DAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCE-GFNADIFTYNTL 357
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
I + G L A + M + + D+IT LL G NG A ++ M
Sbjct: 358 IHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEK 417
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+ +YN + GL + +KA EL + + + PD T+ +I G G EA
Sbjct: 418 YIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREA 475
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 114/302 (37%), Gaps = 88/302 (29%)
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLY---EMEKKGI 194
++S +F++ LF ++ H + P +V + ++ A +L T++Y +ME GI
Sbjct: 47 LHSIRFEDAFALFFEMVHSQPL-PSIVDFTRLLTA---TANLRRYETVIYFSQKMELYGI 102
Query: 195 RLDL-----------------------------------ITFNTLLLGFYSNGRFADAEK 219
DL +TF +LL GF R DA
Sbjct: 103 SHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFS 162
Query: 220 IWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK----------------- 262
+ MV PNV YN +DGL + ALEL+ EM K
Sbjct: 163 LVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLC 222
Query: 263 ------------------EINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKA 301
INPDV TF ALI FV +GNL+EA+ Y +S N
Sbjct: 223 YSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNV 282
Query: 302 IFKLLVPFVCEKGDLDFAFNLCKRTF----SERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
+ ++ +C G L A K+TF S+ C + ++ K V+E +L
Sbjct: 283 TYNSIINGLCMHGRLYDA----KKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKL 338
Query: 358 VE 359
+
Sbjct: 339 FQ 340
>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
Length = 687
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 90/388 (23%), Positives = 169/388 (43%), Gaps = 51/388 (13%)
Query: 25 GSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQK 84
G+++ G+ K+ + ++ +K ++ N IY+ + L R + + +
Sbjct: 223 GTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFT-EM 281
Query: 85 QYKDISKEGFTA-RLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKF 143
Q K I + FT +I + + + +A ++ EM R V+++NAL+ A V KF
Sbjct: 282 QEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKF 341
Query: 144 DEVDGLFKD-LPHKL---------------------------------GIEPDLVSYNTI 169
E + L+ + LP + G P+L+++NT+
Sbjct: 342 FEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTL 401
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
I + +D LL+EM + G+ D T+NTL+ GFY G A + + M++ +
Sbjct: 402 IDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGL 461
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE-----------INPDVFTFYALIKGF 278
P++ + + LDGL + K ALE+ M+ + + PDV T+ LI G
Sbjct: 462 CPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGL 521
Query: 279 VNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQ 335
+NEG EA+ Y + G + + ++ +C++ LD A + S+ +
Sbjct: 522 INEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNV 581
Query: 336 APLQLVVDRLAKELRVEEAKEL-VELGK 362
+++ K RV++ EL E+G+
Sbjct: 582 VTFTTLINGYCKAGRVDDGLELFCEMGR 609
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 110/218 (50%), Gaps = 9/218 (4%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGL--FKDLPHKLGIEPDLVSYN 167
A + D M + T +++ ++ G C KK D V L + + I P++V Y+
Sbjct: 203 AVALLDRMMEDGLQPTQITYGTIVDGMC---KKGDTVSALNLLRKMEEVSHIIPNVVIYS 259
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
II + G A L EM++KGI DL T+N++++GF S+GR++DAE++ + M+
Sbjct: 260 AIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER 319
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+ P+V +YNA ++ E + +A EL EM + I P+ T+ ++I GF + L+ A
Sbjct: 320 KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAA 379
Query: 288 KRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
+ + GC N F L+ C +D L
Sbjct: 380 EHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMEL 417
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 117/273 (42%), Gaps = 13/273 (4%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
S+I G K+N L F + G N + + AKR E+L +
Sbjct: 365 SMIDGFCKQNRLDAAEHMFYLMATKG-CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTE 423
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFD 144
++ LI + A + EM +++ + LL G C N K D
Sbjct: 424 TGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKD 483
Query: 145 EVDGLFK---------DLPHKL-GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGI 194
++ +FK D H G+EPD+ +YN +I +++G A L EM +GI
Sbjct: 484 ALE-MFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI 542
Query: 195 RLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALE 254
D IT+++++ G R +A +++++M + + PNV ++ ++G + LE
Sbjct: 543 VPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLE 602
Query: 255 LVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
L EM + I + T+ LI GF GN+ A
Sbjct: 603 LFCEMGRRGIVANAITYITLICGFRKVGNINGA 635
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 5/219 (2%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
E+A +F +M +V+ F L+G V ++ D V L++ + K I D+ S+N
Sbjct: 60 LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERK-QIRCDIYSFN 118
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
+IK F L A + ++ K G+ D++TF TLL G R ++A + M
Sbjct: 119 ILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFET 178
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
RPNV ++ ++GL E + +A+ L+ M + P T+ ++ G +G+ A
Sbjct: 179 TCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSA 238
Query: 288 KRWYNK----SGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
K S N I+ ++ +C+ G A NL
Sbjct: 239 LNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNL 277
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 83/175 (47%), Gaps = 1/175 (0%)
Query: 119 PGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGS 178
P E V ++N L+ +N KF E + L++++PH+ GI PD ++Y+++I +
Sbjct: 503 PFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR-GIVPDTITYSSMIDGLCKQSR 561
Query: 179 LDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNA 238
LD A + M K +++TF TL+ G+ GR D +++ M + N +Y
Sbjct: 562 LDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYIT 621
Query: 239 RLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK 293
+ G AL++ EM S + PD T ++ G ++ L+ A K
Sbjct: 622 LICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEK 676
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 102/218 (46%), Gaps = 6/218 (2%)
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT 203
D +D LF D+ + P +V + ++ V D +L +ME+K IR D+ +FN
Sbjct: 62 DAID-LFSDMLRSRPL-PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNI 119
Query: 204 LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
L+ F S + A + + + + P+V ++ L GL +E + +AL+ +M
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETT 179
Query: 264 INPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAF 320
P+V TF L+ G EG + EA ++ G + + +V +C+KGD A
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239
Query: 321 NLCKRTFSERCLVDQAPL-QLVVDRLAKELRVEEAKEL 357
NL ++ ++ + ++D L K+ R +A+ L
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNL 277
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 68/157 (43%), Gaps = 5/157 (3%)
Query: 207 GFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKK-ALELVGEMRSKEIN 265
GF+ DA ++ M+ P+V + +L G+ + + + L +M K+I
Sbjct: 53 GFHEIKGLEDAIDLFSDMLRSRPLPSVVDF-CKLMGVVVRMERPDLVISLYQKMERKQIR 111
Query: 266 PDVFTFYALIKGFVNEGNLEEAKRWYNKS---GCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
D+++F LIK F + L A + K G + F L+ +C + + A +
Sbjct: 112 CDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDF 171
Query: 323 CKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ F C + +++ L +E R+ EA L++
Sbjct: 172 FHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLD 208
>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g01110-like [Cucumis sativus]
Length = 749
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 134/271 (49%), Gaps = 8/271 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + + +A K+ DEM R C V+++N L K F + D LF ++ +
Sbjct: 438 LIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVER- 496
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ PD ++ T+I+ + G++D A L M + ++ D +T+NTL+ GF G A
Sbjct: 497 GMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRA 556
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+++W+ M+ ++ P+ SY L+G +AL L +M K I P++ T LIKG
Sbjct: 557 KELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKG 616
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
+ G++ +A + +K +G + + L+ ++ +L+ AF L +
Sbjct: 617 YCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFN 676
Query: 335 QAPLQLVVDRLAKELRVEEAKE----LVELG 361
L+++ E +++EA++ ++E+G
Sbjct: 677 IITYNLILNGFCAEGKMQEAEQVLRKMIEIG 707
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 153/352 (43%), Gaps = 18/352 (5%)
Query: 25 GSVIRG-----IYKENNLKRLVDKFKKSSDLGRFRTNT---GIYTGTV--QRLANAK-RF 73
G V+RG +Y N + + K +K ++ F ++ G++ V L NA R
Sbjct: 246 GEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCRE 305
Query: 74 RWIEEILEHQKQYKDISKE-GFTARLIALYG--KAAMFENARKVFDEMPGRNCEQTVLSF 130
+EE + + E G LYG K ++ A+ V EM ++
Sbjct: 306 GLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATY 365
Query: 131 NALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEME 190
N LL E +F ++ + G+ PDLVS++++I G L A EME
Sbjct: 366 NTLLVEICRRDNILEAQEIFDEMSRR-GVLPDLVSFSSLIGVLARNGHLYQALMHFREME 424
Query: 191 KKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTK 250
+ GI D + + L+ GF NG +DA K+ + M+ +V +YN L+GL +K
Sbjct: 425 RSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFA 484
Query: 251 KALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLV 307
A L EM + + PD +TF LI+G+ +GN+++A + ++ +K + L+
Sbjct: 485 DADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLI 544
Query: 308 PFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
C+ G++ A L + + D V++ + EA L +
Sbjct: 545 DGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCD 596
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 102/196 (52%), Gaps = 1/196 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + KA A++++D+M ++ +S+ +L +S E L + K
Sbjct: 543 LIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEK- 601
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
GI P+LV+ NT+IK + G + A L +M GI D ++NTL+ G+ A
Sbjct: 602 GIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKA 661
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ M ++ N+ +YN L+G E + ++A +++ +M INPD T+ +LI G
Sbjct: 662 FILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLING 721
Query: 278 FVNEGNLEEAKRWYNK 293
V++ N++EA R++++
Sbjct: 722 HVSQDNMKEAFRFHDE 737
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 123/248 (49%), Gaps = 14/248 (5%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTG----IYTGTVQRLANAKRFRWIEEILE 81
++IRG K+ N+ + ++ F+ RTN Y + A +E+ +
Sbjct: 507 TLIRGYCKDGNMDKALNLFE-----AMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWD 561
Query: 82 HQKQYKDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVN 139
+ KDI + + ++ + + + A + D+M + +++ N L+ G C +
Sbjct: 562 DMIR-KDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRS 620
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
+ L K + + GI PD SYNT+I ++ + +L+ A L+ EMEK+G++ ++I
Sbjct: 621 GDMPKAYEYLSKMISN--GIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNII 678
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
T+N +L GF + G+ +AE++ M+ + + P+ +Y++ ++G + K+A EM
Sbjct: 679 TYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEM 738
Query: 260 RSKEINPD 267
+ + PD
Sbjct: 739 LQRGLVPD 746
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/197 (20%), Positives = 88/197 (44%), Gaps = 3/197 (1%)
Query: 166 YNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMV 225
Y+ +++ +V L + + +KG+ + + N LL G G A +I+ +V
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249
Query: 226 NMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLE 285
+ NV + N ++ L +++ + + + +M K + D+ T+ LI + EG +E
Sbjct: 250 RGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVE 309
Query: 286 EAKRWYNK-SGCGMNKAI--FKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVV 342
EA + N S GM + + ++ +C+ G D A ++ + A ++
Sbjct: 310 EAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLL 369
Query: 343 DRLAKELRVEEAKELVE 359
+ + + EA+E+ +
Sbjct: 370 VEICRRDNILEAQEIFD 386
>gi|255660924|gb|ACU25631.1| pentatricopeptide repeat-containing protein [Lampayo castellani]
Length = 484
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 143/320 (44%), Gaps = 34/320 (10%)
Query: 73 FRWIEE--ILEHQKQYK---------------------DISKEGFT------ARLIALYG 103
FRW+E + EH ++ D+ K+G +I YG
Sbjct: 32 FRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVLMIDSYG 91
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K + + + K+F +M E+T+ S++AL + +F F + GIEP
Sbjct: 92 KEGIVQESVKLFQKMEELGVERTIKSYDALFKVIMRRGRFMMAKRYFNKML-SXGIEPTR 150
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
++N +I F G +++AN +M+ + I D+IT+NT++ G+Y + +AEK +
Sbjct: 151 HTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVITYNTMINGYYRVKKMEEAEKYFVE 210
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M N+ P V +Y + G Q AL LV EM+ I P+ T+ L+ G N
Sbjct: 211 MKGKNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYSTLLPGLCNAEK 270
Query: 284 LEEA----KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQ 339
+ EA K +K + +IF L+ C+ G+LD A ++ K +
Sbjct: 271 MSEARSILKEMVDKYIAPTDNSIFMRLISSQCKAGNLDAAADVLKSMIRLSVPTEAGHYG 330
Query: 340 LVVDRLAKELRVEEAKELVE 359
++++ K + ++A +L++
Sbjct: 331 VLIENYCKAGQYDQAVKLLD 350
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 107/246 (43%), Gaps = 47/246 (19%)
Query: 87 KDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
++IS + T +I Y + E A K F EM G+N E TV+++ L+ V+ + D+
Sbjct: 179 REISPDVITYNTMINGYYRVKKMEEAEKYFVEMKGKNIEPTVVTYTTLIKGYVSVDQVDD 238
Query: 146 VDGLFKDLPHKLGIEPDLVSYNT----------------IIKAFVDK------------- 176
L +++ GI+P+ ++Y+T I+K VDK
Sbjct: 239 ALRLVEEM-KGYGIKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYIAPTDNSIFMRL 297
Query: 177 -------GSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMV--NM 227
G+LD+A +L M + + + + L+ + G++ A K+ + ++ ++
Sbjct: 298 ISSQCKAGNLDAAADVLKSMIRLSVPTEAGHYGVLIENYCKAGQYDQAVKLLDKLIEKDI 357
Query: 228 NVRPNV------RSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
VRP +YN ++ L QT KA LV ++ + D LI+G E
Sbjct: 358 IVRPQSTLHMEPSAYNPIVEYLCNNGQTSKAEALVRQLMKLGVQ-DPTALNTLIRGHSQE 416
Query: 282 GNLEEA 287
G+ + A
Sbjct: 417 GSPDSA 422
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 95/215 (44%), Gaps = 17/215 (7%)
Query: 37 LKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTA 96
LK +VDK+ +D I+ + A ++L+ + ++ G
Sbjct: 278 LKEMVDKYIAPTD-------NSIFMRLISSQCKAGNLDAAADVLKSMIRLSVPTEAGHYG 330
Query: 97 RLIALYGKAAMFENARKVFDEM--------PGRNCEQTVLSFNALLGACVNSKKFDEVDG 148
LI Y KA ++ A K+ D++ P ++N ++ N+ + + +
Sbjct: 331 VLIENYCKAGQYDQAVKLLDKLIEKDIIVRPQSTLHMEPSAYNPIVEYLCNNGQTSKAEA 390
Query: 149 LFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
L + L KLG++ D + NT+I+ +GS DSA LL M ++ + + +++L+ +
Sbjct: 391 LVRQL-MKLGVQ-DPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVGSEKSAYDSLVQSY 448
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
ADA+ ++M+ + P+ + + ++ L
Sbjct: 449 LKKSEPADAKAALDSMIENDHLPDSSLFRSVMESL 483
>gi|358346655|ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503316|gb|AES84519.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1023
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 138/264 (52%), Gaps = 4/264 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LIA Y K E + ++ +M V++ +++L K E LF+++ +++
Sbjct: 327 LIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREM-YEM 385
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++P+ VSY TII + G + A L +M +GI D++T T++ G + G+ +A
Sbjct: 386 GLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEA 445
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
E+++ET++ +N+ PN +Y+A LDG + + A ++ +M + + P+V TF ++I G
Sbjct: 446 EEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIING 505
Query: 278 FVNEGNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
+ +G L +A R + N ++ +L+ + G+ D A + CK S R
Sbjct: 506 YAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEES 565
Query: 335 QAPLQLVVDRLAKELRVEEAKELV 358
++++ L + R++EA+ L+
Sbjct: 566 NVIFDILLNNLKRVGRMDEARSLI 589
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 5/210 (2%)
Query: 78 EILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGAC 137
+IL K Y + LI K E A DEM T ++ L+ A
Sbjct: 691 DILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAY 750
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLD 197
S+K D++ + + L G+E L YNT+I F G A +L EM K+GI D
Sbjct: 751 SRSEKADKILQIHEKLVAS-GLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISAD 809
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLA----IEKQTKKAL 253
L+T+N L+ G+ + A K + M + PN+ +YN L GL+ +E+ ++
Sbjct: 810 LVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETE 869
Query: 254 ELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
+LV EM + + P+ T+ L+ G+ GN
Sbjct: 870 KLVSEMNERGLVPNAATYDILVSGYGRVGN 899
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 102/243 (41%), Gaps = 7/243 (2%)
Query: 55 TNTGIYTG---TVQRL-ANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFEN 110
T T +Y T+ RL RF H + + F L+ + + +
Sbjct: 53 TKTHLYVSFFCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQ 112
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
+ ++ +M V S N L+ + D G ++ ++ D V+YNT+I
Sbjct: 113 VKLMYSDMLFCGVVPDVFSVNVLVHSLCKVGDLDLALGYLRN---NDVVDIDNVTYNTVI 169
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
F KG +D LL EM K+G+ D IT N L+ G+ G AE + +V+ V
Sbjct: 170 WGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVT 229
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
+V N +DG +A EL+ ++ D+ T+ L+K F G+L A+
Sbjct: 230 KDVIGLNTLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESL 289
Query: 291 YNK 293
+N+
Sbjct: 290 FNE 292
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 101/233 (43%), Gaps = 37/233 (15%)
Query: 96 ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPH 155
A LI Y K A + EM +N V+++NAL+ + K+D + +
Sbjct: 605 ASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMI-- 662
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
+LG+ PD ++YNTII + KG + A +L EM+ GI + +T+N L+ G G
Sbjct: 663 ELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVE 722
Query: 216 DAEKIWETMVNMNVRP-----------------------------------NVRSYNARL 240
AE + M+ M P ++ YN +
Sbjct: 723 KAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLI 782
Query: 241 DGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK 293
T+KA ++ EM + I+ D+ T+ ALI+G+ ++E+A + Y++
Sbjct: 783 TVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQ 835
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 112/244 (45%), Gaps = 23/244 (9%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKK-------FDEVDGLF 150
LI Y +A + A ++ + + + ++++N LL A + F+E+ G +
Sbjct: 238 LIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFW 297
Query: 151 KDLPHKL------------GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL 198
KD +L ++P LV+Y T+I A+ ++ +++L +M GI D+
Sbjct: 298 KD-EDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDV 356
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
+T +++L GF +G+ +A ++ M M + PN SY ++ L + +A L +
Sbjct: 357 VTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQ 416
Query: 259 MRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGD 315
M + I+ D+ T ++ G G +EA+ + K N + L+ C+ G
Sbjct: 417 MVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGK 476
Query: 316 LDFA 319
++ A
Sbjct: 477 MELA 480
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 111/261 (42%), Gaps = 5/261 (1%)
Query: 102 YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEP 161
Y K E A V +M + V++F++++ + + +++ + + P
Sbjct: 471 YCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQR-NVMP 529
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
+ + Y +I + G D A+ EM+ + + + F+ LL GR +A +
Sbjct: 530 NTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLI 589
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
M + + P++ +Y + +DG E AL +V EM+ K I DV + ALIKG +
Sbjct: 590 IDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRL 649
Query: 282 GNLEE---AKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPL 338
G + R + G + + ++ C KG + A ++ S + +
Sbjct: 650 GKYDPRYVCSRMI-ELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTY 708
Query: 339 QLVVDRLAKELRVEEAKELVE 359
+++ L K VE+A+ ++
Sbjct: 709 NILIGGLCKTGAVEKAESALD 729
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 99/208 (47%), Gaps = 19/208 (9%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNS---KKFDEVDGLFKDL 153
LI ++ + M A+ V DEM R ++++NAL+ G C S K +F D
Sbjct: 781 LITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVD- 839
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKG----SLDSANTLLYEMEKKGIRLDLITFNTLLLGFY 209
GI P++ +YNT++ + G ++ L+ EM ++G+ + T++ L+ G+
Sbjct: 840 ----GIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGY- 894
Query: 210 SNGRFADAEKIWETMVNMNVR---PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINP 266
GR + +K + M + P +++YN + A + +A EL+ ++ +K P
Sbjct: 895 --GRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIP 952
Query: 267 DVFTFYALIKGFVNEGNLEEAKRWYNKS 294
+ FT+ L G++N E R +S
Sbjct: 953 NSFTYDILTCGWLNLSYEPEIDRSLKRS 980
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 95/224 (42%), Gaps = 22/224 (9%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ D++ NT+I + + G + A L+ + +++D++T+NTLL F G A
Sbjct: 227 GVTKDVIGLNTLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRA 286
Query: 218 EKIWETMVNM-------------------NVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
E ++ ++ N++P + +Y + +++ L +
Sbjct: 287 ESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKK 346
Query: 259 MRSKEINPDVFTFYALIKGFVNEGNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKGD 315
M I PDV T +++ GF G L EA R + G N + ++ + + G
Sbjct: 347 MIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGR 406
Query: 316 LDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ AFNL + D V+D L K + +EA+E+ E
Sbjct: 407 VMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFE 450
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 88/207 (42%), Gaps = 52/207 (25%)
Query: 129 SFNALLGACVNSKKFDEV------DGLFK-----------DLPHKLGIEPDLVSYNTIIK 171
+FN V FD V DGLFK + KL + P+ V+Y+ ++
Sbjct: 410 AFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLD 469
Query: 172 AFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRP 231
+ G ++ A +L +MEK+ + ++ITF++++ G+ G + A + MV NV P
Sbjct: 470 GYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMP 529
Query: 232 NVRSYNARLDG------------LAIEKQTKK-----------------------ALELV 256
N Y +DG E ++++ A L+
Sbjct: 530 NTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLI 589
Query: 257 GEMRSKEINPDVFTFYALIKGFVNEGN 283
+M SK I+PD+ + +LI G+ EGN
Sbjct: 590 IDMYSKGIDPDIVNYASLIDGYFKEGN 616
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 80/176 (45%), Gaps = 5/176 (2%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIE--PDLVSY 166
E+A + +EM +++N L+G + ++ + ++ L +E P +++
Sbjct: 687 EDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEM---LVMEFVPTPITH 743
Query: 167 NTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVN 226
++KA+ D + ++ G+ L L +NTL+ F G A+ + + MV
Sbjct: 744 KFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVK 803
Query: 227 MNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEG 282
+ ++ +YNA + G +KAL+ +M I P++ T+ L+ G N G
Sbjct: 804 RGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAG 859
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 84/189 (44%), Gaps = 12/189 (6%)
Query: 88 DISKEGFTARLIAL------YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSK 141
++ K G +A L+ Y + E A K + +M + ++N LLG N+
Sbjct: 800 EMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAG 859
Query: 142 KFDEVDGLFKDLPHKL---GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL 198
+E+ + L ++ G+ P+ +Y+ ++ + G+ L EM KG L
Sbjct: 860 LMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTL 919
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDG---LAIEKQTKKALEL 255
T+N L+ + +G+ +A ++ ++ PN +Y+ G L+ E + ++L+
Sbjct: 920 KTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDILTCGWLNLSYEPEIDRSLKR 979
Query: 256 VGEMRSKEI 264
E+ K++
Sbjct: 980 SYEIEVKKL 988
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 88/202 (43%), Gaps = 15/202 (7%)
Query: 166 YNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMV 225
+ T+I+ ++ +A+ M G+ L +NTLL F ++G + + ++ M+
Sbjct: 62 FCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDML 121
Query: 226 NMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE-INPDVFTFYALIKGFVNEGNL 284
V P+V S N + L AL G +R+ + ++ D T+ +I GF +G +
Sbjct: 122 FCGVVPDVFSVNVLVHSLCKVGDLDLAL---GYLRNNDVVDIDNVTYNTVIWGFCQKGLV 178
Query: 285 EEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFA----FNLCKRTFSERCLVDQAP 337
++ + K G + +LV C G + +A +NL ++ D
Sbjct: 179 DQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTK----DVIG 234
Query: 338 LQLVVDRLAKELRVEEAKELVE 359
L ++D + + +A EL+E
Sbjct: 235 LNTLIDGYCEAGLMSQATELIE 256
>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 158/335 (47%), Gaps = 7/335 (2%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I G+ K FKK + G + N Y + L K +I + K
Sbjct: 205 TIINGLCKIGETTAAAGLFKKMEEAG-CQPNVVTYNILIDSLCKDKLVNEALDIFSYMKA 263
Query: 86 YKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
K IS + FT LI ++ A + +EM N + +FN L+ A K
Sbjct: 264 -KRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVS 322
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
E G+FK + ++G+EPD+V+Y++++ + + + A L M KG + D ++N L
Sbjct: 323 EAQGVFKTMT-EMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNIL 381
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+ G+ R +A++++ M++ + P+ +YN + GL + ++A +L M S
Sbjct: 382 IKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGN 441
Query: 265 NPDVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFN 321
PD+FT+ L+ GF EG L +A R + + + A++ +L+ +C+ G+L A
Sbjct: 442 LPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARK 501
Query: 322 LCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKE 356
L F + L + +++ L KE ++EA E
Sbjct: 502 LFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALE 536
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 103/244 (42%), Gaps = 42/244 (17%)
Query: 78 EILEHQKQYKDISKEGFTARLIA----LYGKAAMFE--NARKVFDEMPGRNCEQTVLSFN 131
++ E Q +K +++ G ++ +YG + E ARK+FD M + C+ S+N
Sbjct: 320 KVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYN 379
Query: 132 ALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEK 191
L+ +K+ DE LF ++ H+ G+ PD V+YNT+I G L A L M
Sbjct: 380 ILIKGYCKAKRIDEAKQLFNEMIHQ-GLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHS 438
Query: 192 KGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDG--------- 242
G DL T++ LL GF G A +++ M + ++P++ YN +D
Sbjct: 439 NGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKD 498
Query: 243 --------------------------LAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
L E +ALE M PD F++ +I+
Sbjct: 499 ARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIR 558
Query: 277 GFVN 280
GF+
Sbjct: 559 GFLQ 562
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 83/162 (51%), Gaps = 3/162 (1%)
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
KLG++PD V++NT+I G A + E G + + T+ T++ G G
Sbjct: 158 KLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETT 217
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
A +++ M +PNV +YN +D L +K +AL++ M++K I+PD+FT+ +LI
Sbjct: 218 AAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLI 277
Query: 276 KGFVNEGNLEEAKRWYNKS---GCGMNKAIFKLLVPFVCEKG 314
+G N +EA N+ N F +LV +C++G
Sbjct: 278 QGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEG 319
>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 90/388 (23%), Positives = 169/388 (43%), Gaps = 51/388 (13%)
Query: 25 GSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQK 84
G+++ G+ K+ + ++ +K ++ N IY+ + L R + + +
Sbjct: 223 GTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFT-EM 281
Query: 85 QYKDISKEGFTA-RLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKF 143
Q K I + FT +I + + + +A ++ EM R V+++NAL+ A V KF
Sbjct: 282 QEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKF 341
Query: 144 DEVDGLFKD-LPHKL---------------------------------GIEPDLVSYNTI 169
E + L+ + LP + G P+L+++NT+
Sbjct: 342 FEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTL 401
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
I + +D LL+EM + G+ D T+NTL+ GFY G A + + M++ +
Sbjct: 402 IDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGL 461
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE-----------INPDVFTFYALIKGF 278
P++ + + LDGL + K ALE+ M+ + + PDV T+ LI G
Sbjct: 462 CPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGL 521
Query: 279 VNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQ 335
+NEG EA+ Y + G + + ++ +C++ LD A + S+ +
Sbjct: 522 INEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNV 581
Query: 336 APLQLVVDRLAKELRVEEAKEL-VELGK 362
+++ K RV++ EL E+G+
Sbjct: 582 VTFTTLINGYCKAGRVDDGLELFCEMGR 609
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 110/218 (50%), Gaps = 9/218 (4%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGL--FKDLPHKLGIEPDLVSYN 167
A + D M + T +++ ++ G C KK D V L + + I P++V Y+
Sbjct: 203 AVALLDRMMEDGLQPTQITYGTIVDGMC---KKGDTVSALNLLRKMEEVSHIIPNVVIYS 259
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
II + G A L EM++KGI DL T+N++++GF S+GR++DAE++ + M+
Sbjct: 260 AIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER 319
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+ P+V +YNA ++ E + +A EL EM + I P+ T+ ++I GF + L+ A
Sbjct: 320 KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAA 379
Query: 288 KRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
+ + GC N F L+ C +D L
Sbjct: 380 EHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMEL 417
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 101/219 (46%), Gaps = 5/219 (2%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
E+A +F +M +V+ F L+G V ++ D V L++ + K I D+ S+
Sbjct: 60 LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERK-QIRCDIYSFT 118
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
+IK F L A + ++ K G+ D++TFNTLL G R ++A ++ M
Sbjct: 119 ILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFET 178
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
RPNV ++ ++GL E + +A+ L+ M + P T+ ++ G +G+ A
Sbjct: 179 TCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSA 238
Query: 288 KRWYNK----SGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
K S N I+ ++ +C+ G A NL
Sbjct: 239 LNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNL 277
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 117/273 (42%), Gaps = 13/273 (4%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
S+I G K+N L F + G N + + AKR E+L +
Sbjct: 365 SMIDGFCKQNRLDAAEHMFYLMATKG-CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTE 423
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFD 144
++ LI + A + EM +++ + LL G C N K D
Sbjct: 424 TGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKD 483
Query: 145 EVDGLFK---------DLPHKL-GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGI 194
++ +FK D H G+EPD+ +YN +I +++G A L EM +GI
Sbjct: 484 ALE-MFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI 542
Query: 195 RLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALE 254
D IT+++++ G R +A +++++M + + PNV ++ ++G + LE
Sbjct: 543 VPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLE 602
Query: 255 LVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
L EM + I + T+ LI GF GN+ A
Sbjct: 603 LFCEMGRRGIVANAITYITLICGFRKVGNINGA 635
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 83/175 (47%), Gaps = 1/175 (0%)
Query: 119 PGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGS 178
P E V ++N L+ +N KF E + L++++PH+ GI PD ++Y+++I +
Sbjct: 503 PFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR-GIVPDTITYSSMIDGLCKQSR 561
Query: 179 LDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNA 238
LD A + M K +++TF TL+ G+ GR D +++ M + N +Y
Sbjct: 562 LDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYIT 621
Query: 239 RLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK 293
+ G AL++ EM S + PD T ++ G ++ L+ A K
Sbjct: 622 LICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEK 676
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 102/218 (46%), Gaps = 6/218 (2%)
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT 203
D +D LF D+ + P +V + ++ V D +L +ME+K IR D+ +F
Sbjct: 62 DAID-LFSDMLRSRPL-PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTI 119
Query: 204 LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
L+ F S + A + + + + P+V ++N L GL +E + +AL L +M
Sbjct: 120 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 179
Query: 264 INPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAF 320
P+V TF L+ G EG + EA ++ G + + +V +C+KGD A
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239
Query: 321 NLCKRTFSERCLVDQAPL-QLVVDRLAKELRVEEAKEL 357
NL ++ ++ + ++D L K+ R +A+ L
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNL 277
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 69/157 (43%), Gaps = 5/157 (3%)
Query: 207 GFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKK-ALELVGEMRSKEIN 265
GF+ DA ++ M+ P+V + +L G+ + + + L +M K+I
Sbjct: 53 GFHEIKGLEDAIDLFSDMLRSRPLPSVVDF-CKLMGVVVRMERPDLVISLYQKMERKQIR 111
Query: 266 PDVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
D+++F LIK F + L A + K G + F L+ +C + + A NL
Sbjct: 112 CDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNL 171
Query: 323 CKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ F C + +++ L +E R+ EA L++
Sbjct: 172 FHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLD 208
>gi|410109885|gb|AFV61022.1| pentatricopeptide repeat-containing protein 11, partial
[Coelocarpum swinglei]
Length = 429
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 153/334 (45%), Gaps = 30/334 (8%)
Query: 66 RLANAKRFRWI-----EEILEHQKQ----------YKDISKEGFTARL------IALYGK 104
RL +F W+ ++LEH + YK+I + G+ A L + + K
Sbjct: 94 RLTREHKF-WVPFDTCRKVLEHLMKLKYFKLVWXFYKEILECGYPASLYFFNILMHRFCK 152
Query: 105 AAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLV 164
A VFD + +V+SFN L+ + DE L K H G++PD+
Sbjct: 153 EGDIRVALSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRL-KSAMHASGVQPDVY 211
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
+Y+ +I + +D AN L EM KG+ + +TF TL+ G NGR A ++++ M
Sbjct: 212 TYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQM 271
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
++ ++ P++ +YN + GL + K+A +L+ EMR K + PD ++ LI G EG+L
Sbjct: 272 LSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMRMKGLKPDKISYTTLIDGCCKEGDL 331
Query: 285 E---EAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLV 341
E E ++ + ++ + L+ +C++G A + + S D ++
Sbjct: 332 ETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSIDAEKMLREMLSVGLRPDTGTYTMI 391
Query: 342 VDRLAKELRVEEA----KELVELGKTNSYCRYNL 371
++ K+ V KE+ G S YN+
Sbjct: 392 INEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNV 425
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 87/180 (48%), Gaps = 1/180 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K + A +V+ +M ++ ++++N L+ + L ++ K
Sbjct: 251 LIDGHCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMRMK- 309
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD +SY T+I +G L++A M ++ IRLD + + L+ G GR DA
Sbjct: 310 GLKPDKISYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSIDA 369
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
EK+ M+++ +RP+ +Y ++ + +L+ EM+ P V T+ L+ G
Sbjct: 370 EKMLREMLSVGLRPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMNG 429
>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 90/388 (23%), Positives = 169/388 (43%), Gaps = 51/388 (13%)
Query: 25 GSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQK 84
G+++ G+ K+ + ++ +K ++ N IY+ + L R + + +
Sbjct: 223 GTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFT-EM 281
Query: 85 QYKDISKEGFTA-RLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKF 143
Q K I + FT +I + + + +A ++ EM R V+++NAL+ A V KF
Sbjct: 282 QEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKF 341
Query: 144 DEVDGLFKD-LPHKL---------------------------------GIEPDLVSYNTI 169
E + L+ + LP + G P+L+++NT+
Sbjct: 342 FEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTL 401
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
I + +D LL+EM + G+ D T+NTL+ GFY G A + + M++ +
Sbjct: 402 IDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGL 461
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE-----------INPDVFTFYALIKGF 278
P++ + + LDGL + K ALE+ M+ + + PDV T+ LI G
Sbjct: 462 CPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGL 521
Query: 279 VNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQ 335
+NEG EA+ Y + G + + ++ +C++ LD A + S+ +
Sbjct: 522 INEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNV 581
Query: 336 APLQLVVDRLAKELRVEEAKEL-VELGK 362
+++ K RV++ EL E+G+
Sbjct: 582 VTFTTLINGYCKAGRVDDGLELFCEMGR 609
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 110/218 (50%), Gaps = 9/218 (4%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGL--FKDLPHKLGIEPDLVSYN 167
A + D M + T +++ ++ G C KK D V L + + I P++V Y+
Sbjct: 203 AVALLDRMMEDGLQPTQITYGTIVDGMC---KKGDTVSALNLLRKMEEVSHIIPNVVIYS 259
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
II + G A L EM++KGI DL T+N++++GF S+GR++DAE++ + M+
Sbjct: 260 AIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER 319
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+ P+V +YNA ++ E + +A EL EM + I P+ T+ ++I GF + L+ A
Sbjct: 320 KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAA 379
Query: 288 KRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
+ + GC N F L+ C +D L
Sbjct: 380 EHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMEL 417
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 117/273 (42%), Gaps = 13/273 (4%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
S+I G K+N L F + G N + + AKR E+L +
Sbjct: 365 SMIDGFCKQNRLDAAEHMFYLMATKG-CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTE 423
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFD 144
++ LI + A + EM +++ + LL G C N K D
Sbjct: 424 TGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKD 483
Query: 145 EVDGLFK---------DLPHKL-GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGI 194
++ +FK D H G+EPD+ +YN +I +++G A L EM +GI
Sbjct: 484 ALE-MFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI 542
Query: 195 RLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALE 254
D IT+++++ G R +A +++++M + + PNV ++ ++G + LE
Sbjct: 543 VPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLE 602
Query: 255 LVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
L EM + I + T+ LI GF GN+ A
Sbjct: 603 LFCEMGRRGIVANAITYITLICGFRKVGNINGA 635
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 101/219 (46%), Gaps = 5/219 (2%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
E+A +F +M +V+ F L+G V ++ D V L++ + K I D+ S+
Sbjct: 60 LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERK-QIRCDIYSFT 118
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
+IK F L A + ++ K G+ D++TFNTLL G R ++A ++ M
Sbjct: 119 ILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFET 178
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
RPNV ++ ++GL E + +A+ L+ M + P T+ ++ G +G+ A
Sbjct: 179 TCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSA 238
Query: 288 KRWYNK----SGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
K S N I+ ++ +C+ G A NL
Sbjct: 239 LNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNL 277
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 83/175 (47%), Gaps = 1/175 (0%)
Query: 119 PGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGS 178
P E V ++N L+ +N KF E + L++++PH+ GI PD ++Y+++I +
Sbjct: 503 PFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR-GIVPDTITYSSMIDGLCKQSR 561
Query: 179 LDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNA 238
LD A + M K +++TF TL+ G+ GR D +++ M + N +Y
Sbjct: 562 LDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYIT 621
Query: 239 RLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK 293
+ G AL++ EM S + PD T ++ G ++ L+ A K
Sbjct: 622 LICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEK 676
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 102/218 (46%), Gaps = 6/218 (2%)
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT 203
D +D LF D+ + P +V + ++ V D +L +ME+K IR D+ +F
Sbjct: 62 DAID-LFSDMLRSRPL-PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTI 119
Query: 204 LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
L+ F S + A + + + + P+V ++N L GL +E + +AL L +M
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 179
Query: 264 INPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAF 320
P+V TF L+ G EG + EA ++ G + + +V +C+KGD A
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239
Query: 321 NLCKRTFSERCLVDQAPL-QLVVDRLAKELRVEEAKEL 357
NL ++ ++ + ++D L K+ R +A+ L
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNL 277
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 69/157 (43%), Gaps = 5/157 (3%)
Query: 207 GFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKK-ALELVGEMRSKEIN 265
GF+ DA ++ M+ P+V + +L G+ + + + L +M K+I
Sbjct: 53 GFHEIKGLEDAIDLFSDMLRSRPLPSVVDF-CKLMGVVVRMERPDLVISLYQKMERKQIR 111
Query: 266 PDVFTFYALIKGFVNEGNLEEAKRWYNKS---GCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
D+++F LIK F + L A + K G + F L+ +C + + A NL
Sbjct: 112 CDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNL 171
Query: 323 CKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ F C + +++ L +E R+ EA L++
Sbjct: 172 FHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLD 208
>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 90/388 (23%), Positives = 169/388 (43%), Gaps = 51/388 (13%)
Query: 25 GSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQK 84
G+++ G+ K+ + ++ +K ++ N IY+ + L R + + +
Sbjct: 223 GTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFT-EM 281
Query: 85 QYKDISKEGFTA-RLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKF 143
Q K I + FT +I + + + +A ++ EM R V+++NAL+ A V KF
Sbjct: 282 QEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKF 341
Query: 144 DEVDGLFKD-LPHKL---------------------------------GIEPDLVSYNTI 169
E + L+ + LP + G P+L+++NT+
Sbjct: 342 FEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTL 401
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
I + +D LL+EM + G+ D T+NTL+ GFY G A + + M++ +
Sbjct: 402 IDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGL 461
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE-----------INPDVFTFYALIKGF 278
P++ + + LDGL + K ALE+ M+ + + PDV T+ LI G
Sbjct: 462 CPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGL 521
Query: 279 VNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQ 335
+NEG EA+ Y + G + + ++ +C++ LD A + S+ +
Sbjct: 522 INEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNV 581
Query: 336 APLQLVVDRLAKELRVEEAKEL-VELGK 362
+++ K RV++ EL E+G+
Sbjct: 582 VTFTTLINGYCKAGRVDDGLELFCEMGR 609
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 110/218 (50%), Gaps = 9/218 (4%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGL--FKDLPHKLGIEPDLVSYN 167
A + D M + T +++ ++ G C KK D V L + + I P++V Y+
Sbjct: 203 AVALLDRMMEDGLQPTQITYGTIVDGMC---KKGDTVSALNLLRKMEEVSHIIPNVVIYS 259
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
II + G A L EM++KGI DL T+N++++GF S+GR++DAE++ + M+
Sbjct: 260 AIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER 319
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+ P+V +YNA ++ E + +A EL EM + I P+ T+ ++I GF + L+ A
Sbjct: 320 KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAA 379
Query: 288 KRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
+ + GC N F L+ C +D L
Sbjct: 380 EHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMEL 417
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 117/273 (42%), Gaps = 13/273 (4%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
S+I G K+N L F + G N + + AKR E+L +
Sbjct: 365 SMIDGFCKQNRLDAAEHMFYLMATKG-CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTE 423
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFD 144
++ LI + A + EM +++ + LL G C N K D
Sbjct: 424 TGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKD 483
Query: 145 EVDGLFK---------DLPHKL-GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGI 194
++ +FK D H G+EPD+ +YN +I +++G A L EM +GI
Sbjct: 484 ALE-MFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI 542
Query: 195 RLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALE 254
D IT+++++ G R +A +++++M + + PNV ++ ++G + LE
Sbjct: 543 VPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLE 602
Query: 255 LVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
L EM + I + T+ LI GF GN+ A
Sbjct: 603 LFCEMGRRGIVANAITYITLICGFRKVGNINGA 635
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 101/219 (46%), Gaps = 5/219 (2%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
E+A +F +M +V+ F L+G V ++ D V L++ + K I D+ S+N
Sbjct: 60 LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERK-QIRCDIYSFN 118
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
+IK F L A + ++ K G+ D++TF TLL G R ++A ++ M
Sbjct: 119 ILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFET 178
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
RPNV ++ ++GL E + +A+ L+ M + P T+ ++ G +G+ A
Sbjct: 179 TCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSA 238
Query: 288 KRWYNK----SGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
K S N I+ ++ +C+ G A NL
Sbjct: 239 LNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNL 277
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 83/175 (47%), Gaps = 1/175 (0%)
Query: 119 PGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGS 178
P E V ++N L+ +N KF E + L++++PH+ GI PD ++Y+++I +
Sbjct: 503 PFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR-GIVPDTITYSSMIDGLCKQSR 561
Query: 179 LDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNA 238
LD A + M K +++TF TL+ G+ GR D +++ M + N +Y
Sbjct: 562 LDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYIT 621
Query: 239 RLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK 293
+ G AL++ EM S + PD T ++ G ++ L+ A K
Sbjct: 622 LICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEK 676
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 102/218 (46%), Gaps = 6/218 (2%)
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT 203
D +D LF D+ + P +V + ++ V D +L +ME+K IR D+ +FN
Sbjct: 62 DAID-LFSDMLRSRPL-PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNI 119
Query: 204 LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
L+ F S + A + + + + P+V ++ L GL +E + +AL L +M
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETT 179
Query: 264 INPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAF 320
P+V TF L+ G EG + EA ++ G + + +V +C+KGD A
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239
Query: 321 NLCKRTFSERCLVDQAPL-QLVVDRLAKELRVEEAKEL 357
NL ++ ++ + ++D L K+ R +A+ L
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNL 277
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 69/157 (43%), Gaps = 5/157 (3%)
Query: 207 GFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKK-ALELVGEMRSKEIN 265
GF+ DA ++ M+ P+V + +L G+ + + + L +M K+I
Sbjct: 53 GFHEIKGLEDAIDLFSDMLRSRPLPSVVDF-CKLMGVVVRMERPDLVISLYQKMERKQIR 111
Query: 266 PDVFTFYALIKGFVNEGNLEEAKRWYNKS---GCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
D+++F LIK F + L A + K G + F L+ +C + + A NL
Sbjct: 112 CDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNL 171
Query: 323 CKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ F C + +++ L +E R+ EA L++
Sbjct: 172 FHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLD 208
>gi|15237375|ref|NP_199422.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171880|sp|Q9FNL2.1|PP418_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g46100
gi|9757730|dbj|BAB08255.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332007954|gb|AED95337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 472
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 132/266 (49%), Gaps = 5/266 (1%)
Query: 64 VQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNC 123
V RL +A +F+ E+++ K + E + YG+ ++ +VF +M +C
Sbjct: 58 VLRLVSANKFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDC 117
Query: 124 EQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFV-DKGSLDSA 182
+ + ++ +L V + + +K++ ++G+ P + S N +IKA + G++D+
Sbjct: 118 DPSQKAYVTVLAILVEENQLNLAFKFYKNM-REIGLPPTVASLNVLIKALCRNDGTVDAG 176
Query: 183 NTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDG 242
+ EM K+G D T+ TL+ G GR +A+K++ MV + P V +Y + ++G
Sbjct: 177 LKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLING 236
Query: 243 LAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMN 299
L K +A+ + EM+SK I P+VFT+ +L+ G +G +A + GC N
Sbjct: 237 LCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPN 296
Query: 300 KAIFKLLVPFVCEKGDLDFAFNLCKR 325
+ L+ +C++ + A L R
Sbjct: 297 MVTYTTLITGLCKEQKIQEAVELLDR 322
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 93/181 (51%), Gaps = 1/181 (0%)
Query: 113 KVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKA 172
K+F EMP R C+ ++ L+ + DE LF ++ K P +V+Y ++I
Sbjct: 178 KIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEK-DCAPTVVTYTSLING 236
Query: 173 FVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPN 232
++D A L EM+ KGI ++ T+++L+ G +GR A +++E M+ RPN
Sbjct: 237 LCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPN 296
Query: 233 VRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN 292
+ +Y + GL E++ ++A+EL+ M + + PD + +I GF EA + +
Sbjct: 297 MVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLD 356
Query: 293 K 293
+
Sbjct: 357 E 357
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 120/268 (44%), Gaps = 10/268 (3%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI+ + + A+K+F EM ++C TV+++ +L+ SK DE +++ K
Sbjct: 198 LISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSK- 256
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
GIEP++ +Y++++ G A L M +G R +++T+ TL+ G + +A
Sbjct: 257 GIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEA 316
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA---- 273
++ + M ++P+ Y + G + ++A + EM I P+ T+
Sbjct: 317 VELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKT 376
Query: 274 ---LIKGFVNEGNLEEAKRWYNKSGCGMNKAIFKL--LVPFVCEKGDLDFAFNLCKRTFS 328
+++G + + G++ + L LV +C+KG+ A L +
Sbjct: 377 SNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVT 436
Query: 329 ERCLVDQAPLQLVVDRLAKELRVEEAKE 356
+ C+ + +L++ + V EA +
Sbjct: 437 DGCIPSKGTWKLLIGHTLDKTIVGEASD 464
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 70/159 (44%), Gaps = 5/159 (3%)
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKA-LELVGEMRSKEINPDVFTFYALI 275
A K ++ M + + P V S N + L T A L++ EM + +PD +T+ LI
Sbjct: 140 AFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLI 199
Query: 276 KGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCL 332
G G ++EAK+ + + C + L+ +C ++D A + S+
Sbjct: 200 SGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIE 259
Query: 333 VDQAPLQLVVDRLAKELRVEEAKELVELGKTNSYCRYNL 371
+ ++D L K+ R +A EL E+ CR N+
Sbjct: 260 PNVFTYSSLMDGLCKDGRSLQAMELFEMMMARG-CRPNM 297
>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
Length = 742
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 136/267 (50%), Gaps = 6/267 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLP--H 155
LI+ + K ++A K+ DEM V++FNA + A +S K E +F+D+
Sbjct: 132 LISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDE 191
Query: 156 KLGI-EPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRF 214
LG+ +P++++YN ++ F +G L+ A L +M+ ++ ++N LLG G+
Sbjct: 192 VLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKL 251
Query: 215 ADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYAL 274
+A+ + + MV+M + PNV SYN +DGL A L+ M S + PD T+ L
Sbjct: 252 LEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTL 311
Query: 275 IKGFVNEGNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERC 331
+ G+ + G + EA R + GC N +L+ + ++G + A L ++ +
Sbjct: 312 LHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGY 371
Query: 332 LVDQAPLQLVVDRLAKELRVEEAKELV 358
++D +V+D L ++++A E+V
Sbjct: 372 VIDTVTCNIVIDGLCNNGKLDKAIEIV 398
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 141/318 (44%), Gaps = 52/318 (16%)
Query: 89 ISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GAC---VNSKKF 143
+S E +T LI L + ++AR++FD+MP + CE SF L+ G C SK
Sbjct: 52 VSPETYTFNVLIGLLCDSGCLDDARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGL 111
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT 203
+ + + +LG P+ V YNT+I +F +G D A L+ EM K G+ D++TFN
Sbjct: 112 ELLGEM-----RRLGFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNA 166
Query: 204 LLLGFYSNGRFADAEKIWETMVNMNV----RPNVRSYNARLDGLAIEKQTKKALELVGEM 259
+ S+G+ +A +I+ M V +PN+ +YN L G E ++A L +M
Sbjct: 167 RISALCSSGKVLEASRIFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKM 226
Query: 260 RSKE-----------------------------------INPDVFTFYALIKGFVNEGNL 284
+ E + P+V+++ ++ G G L
Sbjct: 227 KVSENLMNRESYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVL 286
Query: 285 EEAK---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLV 341
+A+ R SG + + L+ C G + A N+ + + C + ++
Sbjct: 287 FDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNIL 346
Query: 342 VDRLAKELRVEEAKELVE 359
+ L KE R+ EA+EL++
Sbjct: 347 LYSLWKEGRISEAEELLQ 364
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 130/281 (46%), Gaps = 18/281 (6%)
Query: 103 GKA-AMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEP 161
GKA + F++ R F E P ++ +N LL +C + D V L KD+ G+ P
Sbjct: 1 GKAISQFKSLRFRFPENP-----PSIYLYNVLLRSCTKEGRVDCVSWLCKDMVAS-GVSP 54
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
+ ++N +I D G LD A L +M +KG + +F L+ G+ G + ++
Sbjct: 55 ETYTFNVLIGLLCDSGCLDDARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELL 114
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
M + PN YN + E +T A +LV EMR ++PDV TF A I +
Sbjct: 115 GEMRRLGFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSS 174
Query: 282 GNLEEAKRWYNKSGC----GM---NKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
G + EA R + G+ N + L++ C++G L+ A L ++ L++
Sbjct: 175 GKVLEASRIFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMN 234
Query: 335 QAPLQLVVDRLAKELRVEEA----KELVELGKTNSYCRYNL 371
+ + + L + ++ EA KE+V++G + YN+
Sbjct: 235 RESYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNI 275
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 146/362 (40%), Gaps = 66/362 (18%)
Query: 33 KENNLKRLVDKFKK---SSDLGRFRTNTGIYTGTVQRLANAKRFR--WIEEIL------- 80
K ++ ++LVD+ +K S D+ F + + L ++ FR I+E+L
Sbjct: 141 KTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQPNI 200
Query: 81 -EHQKQYKDISKEGFTARLIALYGKAAMFEN----------------------ARKVFDE 117
+ KEG AL+ K + EN A+ V E
Sbjct: 201 ITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVLKE 260
Query: 118 MPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDK 176
M E V S+N ++ G C N FD + L G+ PD V+Y T++ +
Sbjct: 261 MVDMGMEPNVYSYNIVMDGLCKNGVLFDAR--MLMRLMTSSGVLPDTVTYTTLLHGYCHT 318
Query: 177 GSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSY 236
G + AN +L EM + G + T N LL + GR ++AE++ + M + +
Sbjct: 319 GKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTC 378
Query: 237 NARLDGLAIEKQTKKALELVGEMRS-----------------------KEINPDVFTFYA 273
N +DGL + KA+E+V M + K+ PD+ ++
Sbjct: 379 NIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYST 438
Query: 274 LIKGFVNEGNLEEAKRWYNKSGCGMN----KAIFKLLVPFVCEKGDLDFAFNLCKRTFSE 329
+I G G + EAK+ + + G N AI+ + + C++G + AF + K +
Sbjct: 439 IISGLCKAGRVGEAKKKFIEM-MGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKK 497
Query: 330 RC 331
C
Sbjct: 498 GC 499
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 113/276 (40%), Gaps = 38/276 (13%)
Query: 121 RNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLD 180
+ C ++S++ ++ + + E F ++ K ++PD Y+ I +F +G +
Sbjct: 427 KKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGK-NLQPDSAIYDVFIHSFCKEGKIS 485
Query: 181 SANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARL 240
SA +L +MEKKG L T+N+L++G S + + + + M V P+V YN L
Sbjct: 486 SAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVL 545
Query: 241 DGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS--GCGM 298
L + K A ++ EM K I+P++ +F LIK F + + + CG
Sbjct: 546 SSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIALNVCGH 605
Query: 299 NKAIFKL-----------------------------------LVPFVCEKGDLDFAFNLC 323
+A++ L L+ +C+ LD A +
Sbjct: 606 KEALYSLTFNELLVGGEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDASGIL 665
Query: 324 KRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ + D A V+D L K EA EL E
Sbjct: 666 HKLIDKGYWFDPASFMPVIDGLGKRGNKHEADELAE 701
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 97/229 (42%), Gaps = 18/229 (7%)
Query: 148 GLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLG 207
GL D + PDL+SY+TII G + A EM K ++ D ++ +
Sbjct: 418 GLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHS 477
Query: 208 FYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPD 267
F G+ + A ++ + M +++YN+ + GL + Q + L+ EMR + ++PD
Sbjct: 478 FCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPD 537
Query: 268 VFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGD-------LD 317
V + ++ G +++A + + G N + F +L+ C+ D +
Sbjct: 538 VSIYNNVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFE 597
Query: 318 FAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKTNSY 366
A N+C +A L + L V +AKEL E S+
Sbjct: 598 IALNVCGHK--------EALYSLTFNELLVGGEVVKAKELFETALDRSF 638
>gi|18087879|gb|AAL59033.1|AC087182_16 hypothetical protein [Oryza sativa Japonica Group]
gi|31432747|gb|AAP54340.1| expressed protein [Oryza sativa Japonica Group]
Length = 428
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 157/351 (44%), Gaps = 28/351 (7%)
Query: 27 VIRGIYKENNLKRLV-DKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
+RG + LV + D R + +++ RLA R R + +
Sbjct: 55 AVRGEADPARIHSLVATALSRPDDYPRLHGSRPLFSLAASRLA---RLRRPDLAASLLRA 111
Query: 86 YKD--ISKEGFTARLIALYGKAAMFENARKVF-DEMPGRNCEQTVLSFNALLGACVNSKK 142
D + G AR I+L+ ++A + F D P + +S +ALL A + +
Sbjct: 112 LLDSAPASPGLLARAISLFPGP---DDALRAFSDSAPAARSD---VSLSALLSALFRAGR 165
Query: 143 FDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKK---GIRLDLI 199
D+V G+ P S+N ++ A V L +A LL EM KK D++
Sbjct: 166 VDDVKSTLASAETSFGVAPGRASHNVLLHALVKNSELAAARKLLGEMAKKLKHRPAPDIV 225
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
++NT+L G+ + G EK+ + + + PNV +YN R+ A + +T K EL+ M
Sbjct: 226 SYNTVLAGYSAQGDEEGFEKLLKEISAKKLEPNVVTYNCRIQWFAKKGETFKGEELLDAM 285
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS------------GCGMNKAIFKLLV 307
SK++ P+ T+ AL++G+ EGN+ A R + + G + + +L
Sbjct: 286 ESKDVAPNYLTYNALVQGYCKEGNVGSAMRVFKRMKVMKRREGRSDLGVSAHSQTYVVLF 345
Query: 308 PFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
+ EK LD A +CK F+ + ++ +V+ L K + EAK++V
Sbjct: 346 RSLVEKERLDDALWICKSCFAMKAAPPFEAVKGLVEGLVKGGKSAEAKDVV 396
>gi|255660886|gb|ACU25612.1| pentatricopeptide repeat-containing protein [Verbena intermedia]
Length = 484
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 130/285 (45%), Gaps = 34/285 (11%)
Query: 73 FRWIEE--ILEHQKQYK---------------------DISKEGFT------ARLIALYG 103
FRW+E + EH ++ D+ K+G +I YG
Sbjct: 32 FRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYG 91
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K + + + K+F +M E+T+ S+NAL + ++ F + + GIEP
Sbjct: 92 KEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSE-GIEPTR 150
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
++N +I F G +++AN +M+ + I D++T+NT++ G+Y + +AEK +
Sbjct: 151 HTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVE 210
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M N+ P V +Y + G Q AL LV EM+ I P+ T+ L+ G N
Sbjct: 211 MKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEK 270
Query: 284 LEEA----KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCK 324
+ EA K +K + +IF L+ C+ G+LD A ++ K
Sbjct: 271 MSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLK 315
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 99/234 (42%), Gaps = 46/234 (19%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I Y + E A K F EM GRN E TV+++ L+ V+ + D+ L +++
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEM-KGF 249
Query: 158 GIEPDLVSYNT----------------IIKAFVDK--------------------GSLDS 181
GI+P+ ++Y+T I+K +DK G+LD+
Sbjct: 250 GIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDA 309
Query: 182 ANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV--RPNV------ 233
A +L M + + + + L+ F G++ A K+ + ++ ++ RP
Sbjct: 310 AADVLKAMIRLSVPTEAGHYGXLIENFCKXGQYDKAVKLLDKLIEKDIILRPQSTLHLEP 369
Query: 234 RSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+YN ++ L Q KA LV ++ + D LI+G EG+ + A
Sbjct: 370 SAYNPMIEYLCNNGQXXKAETLVRQLXKLGVQ-DPTALNTLIRGHSQEGSPDSA 422
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 98/250 (39%), Gaps = 17/250 (6%)
Query: 39 RLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEIL-EHQKQYKDISKEGFTAR 97
RLV++ K + N Y+ + L NA++ IL E +Y + R
Sbjct: 241 RLVEEMKGFG----IKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMR 296
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHK- 156
LI+ + K+ + A V M + + L+ ++D+ L L K
Sbjct: 297 LISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGXLIENFCKXGQYDKAVKLLDKLIEKD 356
Query: 157 --------LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
L +EP +YN +I+ + G A TL+ ++ K G++ D NTL+ G
Sbjct: 357 IILRPQSTLHLEPS--AYNPMIEYLCNNGQXXKAETLVRQLXKLGVQ-DPTALNTLIRGH 413
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDV 268
G A ++ + M+ V +YN+ + + + A + M + PD
Sbjct: 414 SQEGSPDSAFELLKIMLRRKVBSEKSAYNSLVQSXLKKNEPXDAKAALDSMIENDHLPDS 473
Query: 269 FTFYALIKGF 278
F ++++
Sbjct: 474 ALFRSVMESL 483
Score = 41.6 bits (96), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 41/215 (19%), Positives = 92/215 (42%), Gaps = 17/215 (7%)
Query: 37 LKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTA 96
LK ++DK+ +D I+ + + ++L+ + ++ G
Sbjct: 278 LKEMMDKYLAPTD-------NSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYG 330
Query: 97 RLIALYGKAAMFENARKVFDEM--------PGRNCEQTVLSFNALLGACVNSKKFDEVDG 148
LI + K ++ A K+ D++ P ++N ++ N+ + + +
Sbjct: 331 XLIENFCKXGQYDKAVKLLDKLIEKDIILRPQSTLHLEPSAYNPMIEYLCNNGQXXKAET 390
Query: 149 LFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
L + L KLG++ D + NT+I+ +GS DSA LL M ++ + + +N+L+
Sbjct: 391 LVRQL-XKLGVQ-DPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVBSEKSAYNSLVQSX 448
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
DA+ ++M+ + P+ + + ++ L
Sbjct: 449 LKKNEPXDAKAALDSMIENDHLPDSALFRSVMESL 483
>gi|255660882|gb|ACU25610.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
Length = 484
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 130/285 (45%), Gaps = 34/285 (11%)
Query: 73 FRWIEE--ILEHQKQYK---------------------DISKEGFT------ARLIALYG 103
FRW+E + EH ++ D+ K+G +I YG
Sbjct: 32 FRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYG 91
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K + + + K+F +M E+T+ S+NAL + ++ F + + GIEP
Sbjct: 92 KEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSE-GIEPTR 150
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
++N +I F G +++AN +M+ + I D++T+NT++ G+Y + +AEK +
Sbjct: 151 HTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVE 210
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M N+ P V +Y + G Q AL LV EM+ I P+ T+ L+ G N
Sbjct: 211 MKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEK 270
Query: 284 LEEA----KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCK 324
+ EA K +K + +IF L+ C+ G+LD A ++ K
Sbjct: 271 MSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLK 315
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 99/234 (42%), Gaps = 46/234 (19%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I Y + E A K F EM GRN E TV+++ L+ V+ + D+ L +++
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMK-GF 249
Query: 158 GIEPDLVSYNT----------------IIKAFVDK--------------------GSLDS 181
GI+P+ ++Y+T I+K +DK G+LD+
Sbjct: 250 GIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDA 309
Query: 182 ANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV--RPNV------ 233
A +L M + + + + L+ F G++ A K+ + ++ ++ RP
Sbjct: 310 AADVLKAMIRLSVPTEAGHYGXLIENFCKVGQYDKAVKLLDKLIEKDIILRPQSTLHLEP 369
Query: 234 RSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+YN ++ L Q KA LV ++ + D LI+G EG+ + A
Sbjct: 370 SAYNPMIEYLCNNGQAXKAETLVRQLXKLGVQ-DPTALNTLIRGHSQEGSPDSA 422
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 41/215 (19%), Positives = 93/215 (43%), Gaps = 17/215 (7%)
Query: 37 LKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTA 96
LK ++DK+ +D I+ + + ++L+ + ++ G
Sbjct: 278 LKEMMDKYLAPTD-------NSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYG 330
Query: 97 RLIALYGKAAMFENARKVFDEM--------PGRNCEQTVLSFNALLGACVNSKKFDEVDG 148
LI + K ++ A K+ D++ P ++N ++ N+ + + +
Sbjct: 331 XLIENFCKVGQYDKAVKLLDKLIEKDIILRPQSTLHLEPSAYNPMIEYLCNNGQAXKAET 390
Query: 149 LFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
L + L KLG++ D + NT+I+ +GS DSA LL M ++ + + +N+L+ +
Sbjct: 391 LVRQL-XKLGVQ-DPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYNSLVQSY 448
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
DA+ ++M+ + P+ + + ++ L
Sbjct: 449 LKKNEPXDAKAALDSMIENDHLPDSALFRSVMEXL 483
Score = 41.2 bits (95), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 98/248 (39%), Gaps = 17/248 (6%)
Query: 39 RLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEIL-EHQKQYKDISKEGFTAR 97
RLV++ K + N Y+ + L NA++ IL E +Y + R
Sbjct: 241 RLVEEMKGFG----IKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMR 296
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHK- 156
LI+ + K+ + A V M + + L+ ++D+ L L K
Sbjct: 297 LISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGXLIENFCKVGQYDKAVKLLDKLIEKD 356
Query: 157 --------LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
L +EP +YN +I+ + G A TL+ ++ K G++ D NTL+ G
Sbjct: 357 IILRPQSTLHLEPS--AYNPMIEYLCNNGQAXKAETLVRQLXKLGVQ-DPTALNTLIRGH 413
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDV 268
G A ++ + M+ V +YN+ + + + A + M + PD
Sbjct: 414 SQEGSPDSAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPXDAKAALDSMIENDHLPDS 473
Query: 269 FTFYALIK 276
F ++++
Sbjct: 474 ALFRSVME 481
>gi|255660902|gb|ACU25620.1| pentatricopeptide repeat-containing protein [Junellia spathulata]
Length = 484
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 143/320 (44%), Gaps = 34/320 (10%)
Query: 73 FRWIEE--ILEHQKQYK---------------------DISKEGFT------ARLIALYG 103
FRW+E + EH ++ D+ K+G +I YG
Sbjct: 32 FRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYG 91
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K + + + K+F +M E+T+ S+NAL + ++ F + + GIEP
Sbjct: 92 KEGIVQESVKMFQKMEELGVERTIKSYNALFXVILRRGRYMMAKRYFNKMLSE-GIEPTR 150
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
++N +I F G +++AN +M+ + I D++T+NT++ G+Y + +AEK +
Sbjct: 151 HTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVE 210
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M N+ P V +Y + G Q AL LV EM+ I P+ T+ L+ G N
Sbjct: 211 MKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEK 270
Query: 284 LEEA----KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQ 339
+ EA K +K + +IF L+ C G+LD A ++ K +
Sbjct: 271 MTEARSILKEMMDKYLAPTDNSIFMRLISSQCNSGNLDAAADVLKAMIRLSVPTEAGHYG 330
Query: 340 LVVDRLAKELRVEEAKELVE 359
++++ K + ++A +L++
Sbjct: 331 VLIENFCKAGQYDQAVKLLD 350
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 99/234 (42%), Gaps = 46/234 (19%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I Y + E A K F EM GRN E TV+++ L+ V+ + D+ L +++
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEM-KGF 249
Query: 158 GIEPDLVSYNT----------------IIKAFVDK--------------------GSLDS 181
GI+P+ ++Y+T I+K +DK G+LD+
Sbjct: 250 GIKPNAITYSTLLPGLCNAEKMTEARSILKEMMDKYLAPTDNSIFMRLISSQCNSGNLDA 309
Query: 182 ANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV--RPNV------ 233
A +L M + + + + L+ F G++ A K+ + ++ ++ RP
Sbjct: 310 AADVLKAMIRLSVPTEAGHYGVLIENFCKAGQYDQAVKLLDKLIEKDIILRPQSTLHLEP 369
Query: 234 RSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+YN ++ L Q KA LV ++ + D LI+G EG+ + A
Sbjct: 370 SAYNPMIEYLCNNGQAAKAEALVRQLLKLGVQ-DPTALNTLIRGHSQEGSPDSA 422
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/215 (20%), Positives = 96/215 (44%), Gaps = 17/215 (7%)
Query: 37 LKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTA 96
LK ++DK+ +D I+ + N+ ++L+ + ++ G
Sbjct: 278 LKEMMDKYLAPTD-------NSIFMRLISSQCNSGNLDAAADVLKAMIRLSVPTEAGHYG 330
Query: 97 RLIALYGKAAMFENARKVFDEM--------PGRNCEQTVLSFNALLGACVNSKKFDEVDG 148
LI + KA ++ A K+ D++ P ++N ++ N+ + + +
Sbjct: 331 VLIENFCKAGQYDQAVKLLDKLIEKDIILRPQSTLHLEPSAYNPMIEYLCNNGQAAKAEA 390
Query: 149 LFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
L + L KLG++ D + NT+I+ +GS DSA LL M ++ + + +N+L+ +
Sbjct: 391 LVRQLL-KLGVQ-DPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYNSLVQSY 448
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
ADA+ ++M+ + P+ + + ++ L
Sbjct: 449 LKKNEPADAKAALDSMIENDHLPDSSLFRSVMESL 483
Score = 37.7 bits (86), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 96/250 (38%), Gaps = 17/250 (6%)
Query: 39 RLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEIL-EHQKQYKDISKEGFTAR 97
RLV++ K + N Y+ + L NA++ IL E +Y + R
Sbjct: 241 RLVEEMKGFG----IKPNAITYSTLLPGLCNAEKMTEARSILKEMMDKYLAPTDNSIFMR 296
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHK- 156
LI+ + + A V M + + L+ + ++D+ L L K
Sbjct: 297 LISSQCNSGNLDAAADVLKAMIRLSVPTEAGHYGVLIENFCKAGQYDQAVKLLDKLIEKD 356
Query: 157 --------LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
L +EP +YN +I+ + G A L+ ++ K G++ D NTL+ G
Sbjct: 357 IILRPQSTLHLEPS--AYNPMIEYLCNNGQAAKAEALVRQLLKLGVQ-DPTALNTLIRGH 413
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDV 268
G A ++ + M+ V +YN+ + + + A + M + PD
Sbjct: 414 SQEGSPDSAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPADAKAALDSMIENDHLPDS 473
Query: 269 FTFYALIKGF 278
F ++++
Sbjct: 474 SLFRSVMESL 483
>gi|255660898|gb|ACU25618.1| pentatricopeptide repeat-containing protein [Glandularia dissecta]
Length = 484
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 130/285 (45%), Gaps = 34/285 (11%)
Query: 73 FRWIEE--ILEHQKQYK---------------------DISKEGFT------ARLIALYG 103
FRW+E + EH ++ D+ K+G +I YG
Sbjct: 32 FRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYG 91
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K + + + K+F +M E+T+ S+NAL + ++ F + + GIEP
Sbjct: 92 KZGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSE-GIEPTR 150
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
++N +I F G +++AN +M+ + I D++T+NT++ G+Y + +AEK +
Sbjct: 151 HTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVE 210
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M N+ P V +Y + G Q AL LV EM+ I P+ T+ L+ G N
Sbjct: 211 MKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEK 270
Query: 284 LEEA----KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCK 324
+ EA K +K + +IF L+ C+ G+LD A ++ K
Sbjct: 271 MSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLK 315
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 99/234 (42%), Gaps = 46/234 (19%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I Y + E A K F EM GRN E TV+++ L+ V+ + D+ L +++
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMK-GF 249
Query: 158 GIEPDLVSYNT----------------IIKAFVDK--------------------GSLDS 181
GI+P+ ++Y+T I+K +DK G+LD+
Sbjct: 250 GIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDA 309
Query: 182 ANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV--RPNV------ 233
A +L M + + + + L+ F G++ A K+ + ++ ++ RP
Sbjct: 310 AADVLKAMXRLSVPTEAGHYGVLIENFCKXGQYDKAVKLLDKLIEKDIILRPQSTLHLEP 369
Query: 234 RSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+YN ++ L Q KA LV ++ + D LI+G EG+ + A
Sbjct: 370 SAYNPMIEYLCNNGQAAKAETLVRQLLKLGVQ-DPTALNTLIRGHSQEGSPDSA 422
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 41/215 (19%), Positives = 93/215 (43%), Gaps = 17/215 (7%)
Query: 37 LKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTA 96
LK ++DK+ +D I+ + + ++L+ + ++ G
Sbjct: 278 LKEMMDKYLAPTD-------NSIFMRLISSHCKSGNLDAAADVLKAMXRLSVPTEAGHYG 330
Query: 97 RLIALYGKAAMFENARKVFDEM--------PGRNCEQTVLSFNALLGACVNSKKFDEVDG 148
LI + K ++ A K+ D++ P ++N ++ N+ + + +
Sbjct: 331 VLIENFCKXGQYDKAVKLLDKLIEKDIILRPQSTLHLEPSAYNPMIEYLCNNGQAAKAET 390
Query: 149 LFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
L + L KLG++ D + NT+I+ +GS DSA LL M ++ + + +N+L+ +
Sbjct: 391 LVRQLL-KLGVQ-DPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYNSLVQSY 448
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
DA+ ++M+ + P+ + + ++ L
Sbjct: 449 LKKNEPXDAKAALDSMIENDHLPDSSLFRSVMESL 483
Score = 41.2 bits (95), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 92/236 (38%), Gaps = 13/236 (5%)
Query: 53 FRTNTGIYTGTVQRLANAKRFRWIEEIL-EHQKQYKDISKEGFTARLIALYGKAAMFENA 111
+ N Y+ + L NA++ IL E +Y + RLI+ + K+ + A
Sbjct: 251 IKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAA 310
Query: 112 RKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHK---------LGIEPD 162
V M + + L+ ++D+ L L K L +EP
Sbjct: 311 ADVLKAMXRLSVPTEAGHYGVLIENFCKXGQYDKAVKLLDKLIEKDIILRPQSTLHLEPS 370
Query: 163 LVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWE 222
+YN +I+ + G A TL+ ++ K G++ D NTL+ G G A ++ +
Sbjct: 371 --AYNPMIEYLCNNGQAAKAETLVRQLLKLGVQ-DPTALNTLIRGHSQEGSPDSAFELLK 427
Query: 223 TMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGF 278
M+ V +YN+ + + + A + M + PD F ++++
Sbjct: 428 IMLRRKVDSEKSAYNSLVQSYLKKNEPXDAKAALDSMIENDHLPDSSLFRSVMESL 483
>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Cucumis sativus]
Length = 749
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 134/271 (49%), Gaps = 8/271 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + + +A K+ DEM R C V+++N L K F + D LF ++ +
Sbjct: 438 LIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVER- 496
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ PD ++ T+I+ + G++D A L M + ++ D +T+NTL+ GF G A
Sbjct: 497 GMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRA 556
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+++W+ M+ ++ P+ SY L+G +AL L +M K I P++ T LIKG
Sbjct: 557 KELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKG 616
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
+ G++ +A + +K +G + + L+ ++ +L+ AF L +
Sbjct: 617 YCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFN 676
Query: 335 QAPLQLVVDRLAKELRVEEAKE----LVELG 361
L+++ E +++EA++ ++E+G
Sbjct: 677 IITYNLILNGFCAEGKMQEAEQVLRKMIEIG 707
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 153/352 (43%), Gaps = 18/352 (5%)
Query: 25 GSVIRG-----IYKENNLKRLVDKFKKSSDLGRFRTNT---GIYTGTV--QRLANAK-RF 73
G V+RG +Y N + + K +K ++ F ++ G++ V L NA R
Sbjct: 246 GEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCRE 305
Query: 74 RWIEEILEHQKQYKDISKE-GFTARLIALYG--KAAMFENARKVFDEMPGRNCEQTVLSF 130
+EE + + E G LYG K ++ A+ V EM ++
Sbjct: 306 GLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATY 365
Query: 131 NALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEME 190
N LL E +F ++ + G+ PDLVS++++I G L A EME
Sbjct: 366 NTLLVEICRRDNILEAQEIFDEMSRR-GVLPDLVSFSSLIGVLARNGHLYQALMHFREME 424
Query: 191 KKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTK 250
+ GI D + + L+ GF NG +DA K+ + M+ +V +YN L+GL +K
Sbjct: 425 RSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFA 484
Query: 251 KALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLV 307
A L EM + + PD +TF LI+G+ +GN+++A + ++ +K + L+
Sbjct: 485 DADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLI 544
Query: 308 PFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
C+ G++ A L + + D V++ + EA L +
Sbjct: 545 DGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCD 596
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 102/196 (52%), Gaps = 1/196 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + KA A++++D+M ++ +S+ +L +S E L + K
Sbjct: 543 LIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEK- 601
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
GI P+LV+ NT+IK + G + A L +M GI D ++NTL+ G+ A
Sbjct: 602 GIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKA 661
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ M ++ N+ +YN L+G E + ++A +++ +M INPD T+ +LI G
Sbjct: 662 FILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLING 721
Query: 278 FVNEGNLEEAKRWYNK 293
V++ N++EA R++++
Sbjct: 722 HVSQDNMKEAFRFHDE 737
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 123/248 (49%), Gaps = 14/248 (5%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTG----IYTGTVQRLANAKRFRWIEEILE 81
++IRG K+ N+ + ++ F+ RTN Y + A +E+ +
Sbjct: 507 TLIRGYCKDGNMDKALNLFE-----AMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWD 561
Query: 82 HQKQYKDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVN 139
+ KDI + + ++ + + + A + D+M + +++ N L+ G C +
Sbjct: 562 DMIR-KDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRS 620
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
+ L K + + GI PD SYNT+I ++ + +L+ A L+ EMEK+G++ ++I
Sbjct: 621 GDMPKAYEYLSKMISN--GIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNII 678
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
T+N +L GF + G+ +AE++ M+ + + P+ +Y++ ++G + K+A EM
Sbjct: 679 TYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEM 738
Query: 260 RSKEINPD 267
+ + PD
Sbjct: 739 LQRGLVPD 746
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/257 (19%), Positives = 108/257 (42%), Gaps = 19/257 (7%)
Query: 122 NCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIE-----PDLVS----------- 165
N + + LS +A++ V ++ E + K G+ L+S
Sbjct: 130 NFKHSSLSLSAMVHFLVRGRRLSEAQACILRMVRKSGVSRVKVVESLISTCFYFGSVGLI 189
Query: 166 YNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMV 225
Y+ +++ +V L + + +KG+ + + N LL G G A +I+ +V
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249
Query: 226 NMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLE 285
+ NV + N ++ L +++ + + + +M K + D+ T+ LI + EG +E
Sbjct: 250 RGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVE 309
Query: 286 EAKRWYNK-SGCGMNKAI--FKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVV 342
EA + N S GM + + ++ +C+ G D A ++ + A ++
Sbjct: 310 EAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLL 369
Query: 343 DRLAKELRVEEAKELVE 359
+ + + EA+E+ +
Sbjct: 370 VEICRRDNILEAQEIFD 386
>gi|115466932|ref|NP_001057065.1| Os06g0199100 [Oryza sativa Japonica Group]
gi|51091829|dbj|BAD36643.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113595105|dbj|BAF18979.1| Os06g0199100 [Oryza sativa Japonica Group]
Length = 1283
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 118/239 (49%), Gaps = 6/239 (2%)
Query: 126 TVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDS--AN 183
TV FNA++G S +FD+ L D IEPDLVS+NT+I A G L + A
Sbjct: 60 TVQVFNAMMGVYARSGRFDDARQLL-DAMRDQDIEPDLVSFNTLINARAKSGCLAAGVAL 118
Query: 184 TLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
LL+E+ + G+R D IT+NTL+ DA ++E M+ RP++ +YNA +
Sbjct: 119 ELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVH 178
Query: 244 AIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNK 300
+ ++A + E+ K PD T+ +L+ F EG++E +R K+G +
Sbjct: 179 GRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDG 238
Query: 301 AIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ ++ + G LD A L + C D ++VD L K R+ EA +++E
Sbjct: 239 ITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLE 297
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 103/196 (52%), Gaps = 1/196 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI+ + + ++A VF+EM C + ++NA++ K E + +FK+L K
Sbjct: 139 LISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELMFKELVEK- 197
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G +PD V+YN+++ AF +G ++ + E+ K G R D IT+NT++ + GR A
Sbjct: 198 GFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGKMGRLDLA 257
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+++ M + P+ +Y +D L + +A +++ EM + P + TF ALI
Sbjct: 258 LGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLVTFSALICA 317
Query: 278 FVNEGNLEEAKRWYNK 293
+ G ++A+R +++
Sbjct: 318 YAKSGRQDDAERTFDR 333
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 94/221 (42%), Gaps = 7/221 (3%)
Query: 78 EILEHQKQYKDISKEGFTARL------IALYGKAAMFENARKVFDEMPGRNCEQTVLSFN 131
++ E K Y + G+ + I+L F + + EM G + ++ N
Sbjct: 707 DVFEVMKIYNGMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEGAGFKPDLVVLN 766
Query: 132 ALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEK 191
LL + FD ++ + + G+EPD +YNT+I + + TLLYEM K
Sbjct: 767 TLLLMYTGTGNFDRTIEVYHSI-LEAGLEPDEDTYNTLIVMYSRNFRPEEGFTLLYEMGK 825
Query: 192 KGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKK 251
+G+ L ++ LL + A+ ++E M R N Y+ + + K
Sbjct: 826 RGLTPKLESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARNHSK 885
Query: 252 ALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN 292
A L+ M+ I P + T + L+ + G+ +EA++ N
Sbjct: 886 AEHLLSAMKEDGIEPTIATMHILMTSYGTSGHPDEAEKVLN 926
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 87/209 (41%), Gaps = 8/209 (3%)
Query: 88 DISKEGFTAR--LIALYGKAAMFENARKVFDEMPGRNCEQTV--LSFNALLGACVNSKKF 143
DIS + R +I YGK +++ A + G E V +NAL+ A S +
Sbjct: 582 DISLNILSCRVAMIEAYGKLKLWQQAENF---VKGLKQESGVDRRIWNALIHAYAESGLY 638
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT 203
+ +F D+ K G P + S N +++A + G LD ++ E++ I++ T
Sbjct: 639 EHARAIF-DIMIKKGPLPTVESVNGMMRALIVDGRLDELYVVVQELQDLDIKISKSTVLL 697
Query: 204 LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
+L F G + KI+ M PN+ Y + L K+ + +V EM
Sbjct: 698 MLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEGAG 757
Query: 264 INPDVFTFYALIKGFVNEGNLEEAKRWYN 292
PD+ L+ + GN + Y+
Sbjct: 758 FKPDLVVLNTLLLMYTGTGNFDRTIEVYH 786
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 83/180 (46%), Gaps = 1/180 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI +Y + E + EM R + S+ LL A +K +++ D LF+++ K
Sbjct: 803 LIVMYSRNFRPEEGFTLLYEMGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMRTK- 861
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G + Y+ ++K + + + A LL M++ GI + T + L+ + ++G +A
Sbjct: 862 GYRLNRSIYHMMMKIYRNARNHSKAEHLLSAMKEDGIEPTIATMHILMTSYGTSGHPDEA 921
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
EK+ ++ + N+ + Y+ LD + + + EM+ + PD + + I+
Sbjct: 922 EKVLNSLKSSNLEISTLPYSTVLDAYLRNRDYSLGITKLLEMKRDGVEPDHQVWTSFIRA 981
>gi|222635128|gb|EEE65260.1| hypothetical protein OsJ_20463 [Oryza sativa Japonica Group]
Length = 1443
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 118/239 (49%), Gaps = 6/239 (2%)
Query: 126 TVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDS--AN 183
TV FNA++G S +FD+ L D IEPDLVS+NT+I A G L + A
Sbjct: 220 TVQVFNAMMGVYARSGRFDDARQLL-DAMRDQDIEPDLVSFNTLINARAKSGCLAAGVAL 278
Query: 184 TLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
LL+E+ + G+R D IT+NTL+ DA ++E M+ RP++ +YNA +
Sbjct: 279 ELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVH 338
Query: 244 AIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNK 300
+ ++A + E+ K PD T+ +L+ F EG++E +R K+G +
Sbjct: 339 GRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDG 398
Query: 301 AIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ ++ + G LD A L + C D ++VD L K R+ EA +++E
Sbjct: 399 ITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLE 457
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 103/196 (52%), Gaps = 1/196 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI+ + + ++A VF+EM C + ++NA++ K E + +FK+L K
Sbjct: 299 LISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELMFKELVEK- 357
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G +PD V+YN+++ AF +G ++ + E+ K G R D IT+NT++ + GR A
Sbjct: 358 GFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGKMGRLDLA 417
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+++ M + P+ +Y +D L + +A +++ EM + P + TF ALI
Sbjct: 418 LGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLVTFSALICA 477
Query: 278 FVNEGNLEEAKRWYNK 293
+ G ++A+R +++
Sbjct: 478 YAKSGRQDDAERTFDR 493
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 94/221 (42%), Gaps = 7/221 (3%)
Query: 78 EILEHQKQYKDISKEGFTARL------IALYGKAAMFENARKVFDEMPGRNCEQTVLSFN 131
++ E K Y + G+ + I+L F + + EM G + ++ N
Sbjct: 867 DVFEVMKIYNGMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEGAGFKPDLVVLN 926
Query: 132 ALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEK 191
LL + FD ++ + + G+EPD +YNT+I + + TLLYEM K
Sbjct: 927 TLLLMYTGTGNFDRTIEVYHSI-LEAGLEPDEDTYNTLIVMYSRNFRPEEGFTLLYEMGK 985
Query: 192 KGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKK 251
+G+ L ++ LL + A+ ++E M R N Y+ + + K
Sbjct: 986 RGLTPKLESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARNHSK 1045
Query: 252 ALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN 292
A L+ M+ I P + T + L+ + G+ +EA++ N
Sbjct: 1046 AEHLLSAMKEDGIEPTIATMHILMTSYGTSGHPDEAEKVLN 1086
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 87/209 (41%), Gaps = 8/209 (3%)
Query: 88 DISKEGFTAR--LIALYGKAAMFENARKVFDEMPGRNCEQTV--LSFNALLGACVNSKKF 143
DIS + R +I YGK +++ A + G E V +NAL+ A S +
Sbjct: 742 DISLNILSCRVAMIEAYGKLKLWQQAENF---VKGLKQESGVDRRIWNALIHAYAESGLY 798
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT 203
+ +F D+ K G P + S N +++A + G LD ++ E++ I++ T
Sbjct: 799 EHARAIF-DIMIKKGPLPTVESVNGMMRALIVDGRLDELYVVVQELQDLDIKISKSTVLL 857
Query: 204 LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
+L F G + KI+ M PN+ Y + L K+ + +V EM
Sbjct: 858 MLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEGAG 917
Query: 264 INPDVFTFYALIKGFVNEGNLEEAKRWYN 292
PD+ L+ + GN + Y+
Sbjct: 918 FKPDLVVLNTLLLMYTGTGNFDRTIEVYH 946
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 83/180 (46%), Gaps = 1/180 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI +Y + E + EM R + S+ LL A +K +++ D LF+++ K
Sbjct: 963 LIVMYSRNFRPEEGFTLLYEMGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMRTK- 1021
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G + Y+ ++K + + + A LL M++ GI + T + L+ + ++G +A
Sbjct: 1022 GYRLNRSIYHMMMKIYRNARNHSKAEHLLSAMKEDGIEPTIATMHILMTSYGTSGHPDEA 1081
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
EK+ ++ + N+ + Y+ LD + + + EM+ + PD + + I+
Sbjct: 1082 EKVLNSLKSSNLEISTLPYSTVLDAYLRNRDYSLGITKLLEMKRDGVEPDHQVWTSFIRA 1141
>gi|222630089|gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
Length = 584
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 150/362 (41%), Gaps = 34/362 (9%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
+ I + + R + F ++SDLG +Y + L + + ++ ++
Sbjct: 38 AAIGAFARAGSADRALKTFYRASDLGCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRK 97
Query: 86 YKDISKEGFTARL-IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
+ +T L I + + ARK+ DEM + C +S ++ + +
Sbjct: 98 -AGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVE 156
Query: 145 EVDGLFKD----------LPHKL-------------------GIEPDLVSYNTIIKAFVD 175
E G + + H L G++P++V+Y TI+ AF
Sbjct: 157 EARGFLAETVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCK 216
Query: 176 KGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRS 235
L A +L M G +++TF L+ GF+ +G+ DA +W MV+ P+ S
Sbjct: 217 ARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTIS 276
Query: 236 YNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK-- 293
YN + GL K AL+ M+ + P+ T+ L+ GF N G+L+ A +N+
Sbjct: 277 YNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMK 336
Query: 294 -SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVE 352
SGC N ++ ++ +C+K D A +L + + C + ++ RL RV
Sbjct: 337 SSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVG 396
Query: 353 EA 354
A
Sbjct: 397 RA 398
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 100/226 (44%), Gaps = 4/226 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+ + A + A +++EM C+ V+ + ++ FD+ + L +
Sbjct: 315 LVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMD- 373
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
P+ V++NT+I D G + A + + M + G + T+N LL G + G DA
Sbjct: 374 NCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDA 433
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ M+N ++ +YN ++ L K A+ L+G M + I PD FTF A+I
Sbjct: 434 FAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHA 493
Query: 278 FVNEGNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAF 320
+ EG + A N C N + +L+ +C +G L A
Sbjct: 494 YCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAM 539
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 115/293 (39%), Gaps = 36/293 (12%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
+IRG+ +LK +D F S N Y+ V +NA I K
Sbjct: 280 LIRGLCCIGDLKGALDFFN-SMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSS 338
Query: 87 KDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLG----------- 135
+I + K MF+ A + D+M NC ++FN L+G
Sbjct: 339 GCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRA 398
Query: 136 ----------AC-VNSKKFDEV-DGLFKDLPHK-----------LGIEPDLVSYNTIIKA 172
C N + ++E+ GLF++ HK G E LV+YNT+I
Sbjct: 399 LNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINC 458
Query: 173 FVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPN 232
A LL M +GI+ D TFN ++ + G+ + A + M +N N
Sbjct: 459 LCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRN 518
Query: 233 VRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG-FVNEGNL 284
V +Y + L + + A+ + +M + I P+ T+ L++ F N G +
Sbjct: 519 VVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAIFTNIGTI 571
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 96/236 (40%), Gaps = 3/236 (1%)
Query: 53 FRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENAR 112
+ N YT V A+ R IL L+ + + +A
Sbjct: 200 LQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDAL 259
Query: 113 KVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIK 171
++ M + +S+N L+ G C +D F + + + P+ +Y+T++
Sbjct: 260 SMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALD--FFNSMKRNALLPNATTYSTLVD 317
Query: 172 AFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRP 231
F + G LD A + EM+ G + +++ + ++ F AE + + M+ N P
Sbjct: 318 GFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPP 377
Query: 232 NVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
N ++N + L + +AL + MR +P+ T+ L+ G EGN ++A
Sbjct: 378 NTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDA 433
>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
Length = 375
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 125/252 (49%), Gaps = 4/252 (1%)
Query: 110 NARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTI 169
+A K+ EM + C +V++FN L+ + + +P G P+ +SYN +
Sbjct: 104 DAEKLLTEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTH-GCTPNSLSYNPL 162
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
+ F + +D A L M +G D++T+NT+L +G+ A ++ + +
Sbjct: 163 LHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGC 222
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
P + +YN +DGL+ +T +A+EL+ EMR K + PDV T+ +LI G EG +EEA +
Sbjct: 223 SPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIK 282
Query: 290 WYNKS---GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLA 346
+++ G N + ++ +C+ D A + S+ C + ++++ +A
Sbjct: 283 FFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIA 342
Query: 347 KELRVEEAKELV 358
E +EA EL+
Sbjct: 343 NEGLAKEALELL 354
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 100/196 (51%), Gaps = 1/196 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+ + K + A + + M R C ++++N +L A K D L L K
Sbjct: 162 LLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSK- 220
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G P L++YNT+I G D A LL+EM KG++ D+IT+++L+ G G+ +A
Sbjct: 221 GCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEA 280
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
K + + V+PN +YN+ + GL +QT +A++ + M SK P ++ LI+G
Sbjct: 281 IKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEG 340
Query: 278 FVNEGNLEEAKRWYNK 293
NEG +EA N+
Sbjct: 341 IANEGLAKEALELLNE 356
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 111/248 (44%), Gaps = 4/248 (1%)
Query: 110 NARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTI 169
A K+ DEM R C+ V+++N L+ + DE +P G +P+++++N I
Sbjct: 34 QAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKFLNSMP-SYGSQPNVITHNII 92
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
+++ G A LL EM +KG ++TFN L+ G A I E M
Sbjct: 93 LRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGC 152
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
PN SYN L G EK+ +A++ + M S+ PD+ T+ ++ +G ++ A
Sbjct: 153 TPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVE 212
Query: 290 WYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLA 346
N+ GC + ++ + + G D A L + D ++ L+
Sbjct: 213 LLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLS 272
Query: 347 KELRVEEA 354
+E +VEEA
Sbjct: 273 REGKVEEA 280
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 119/250 (47%), Gaps = 4/250 (1%)
Query: 113 KVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKA 172
+V D + C V+++ L+ A + L ++ + G +PD+V+YN ++
Sbjct: 2 EVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSR-GCKPDVVTYNVLVNG 60
Query: 173 FVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPN 232
+G LD A L M G + ++IT N +L S GR+ DAEK+ MV P+
Sbjct: 61 MCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPS 120
Query: 233 VRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN 292
V ++N ++ L + +A++++ +M + P+ ++ L+ GF E ++ A ++
Sbjct: 121 VVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLE 180
Query: 293 ---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKEL 349
GC + + ++ +C+ G +D A L + S+ C V+D L+K
Sbjct: 181 IMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVG 240
Query: 350 RVEEAKELVE 359
+ ++A EL+
Sbjct: 241 KTDQAVELLH 250
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 81/167 (48%), Gaps = 3/167 (1%)
Query: 197 DLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELV 256
D+IT+ L+ + A K+ + M + +P+V +YN ++G+ E + +A++ +
Sbjct: 15 DVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKFL 74
Query: 257 GEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEK 313
M S P+V T +++ + G +A++ + GC + F +L+ F+C K
Sbjct: 75 NSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCRK 134
Query: 314 GDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVEL 360
G L A ++ ++ + C + ++ KE +++ A + +E+
Sbjct: 135 GLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEI 181
>gi|255660920|gb|ACU25629.1| pentatricopeptide repeat-containing protein [Aloysia virgata]
Length = 484
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 129/285 (45%), Gaps = 34/285 (11%)
Query: 73 FRWIEE--ILEHQKQYK---------------------DISKEGFT------ARLIALYG 103
FRW+E + EH ++ D+ K+G +I YG
Sbjct: 32 FRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVLMIDSYG 91
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K + + + K+F +M E+T+ S++AL + +F F + + GIEP
Sbjct: 92 KEGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRGRFMMAKRYFNKMLSE-GIEPTR 150
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
+N +I F G +++AN +M+ + I D+IT+NT++ G+Y + +AEK +
Sbjct: 151 HXFNVMIWGFFLSGKVETANRFFEDMKSREISPDVITYNTMINGYYRVKKMDEAEKYFVE 210
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M N+ P V +Y + G Q AL LV EM+ I P+ T+ L+ G N
Sbjct: 211 MKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYSTLLPGLCNAEK 270
Query: 284 LEEA----KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCK 324
+ EA K +K + +IF L+ C+ G+LD A ++ K
Sbjct: 271 MSEARSILKEMVDKYMAPTDNSIFXRLISSQCKTGNLDAAADVLK 315
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 105/246 (42%), Gaps = 47/246 (19%)
Query: 87 KDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
++IS + T +I Y + + A K F EM GRN E TV+++ L+ V+ + D+
Sbjct: 179 REISPDVITYNTMINGYYRVKKMDEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDD 238
Query: 146 VDGLFKDLPHKLGIEPDLVSYNT----------------IIKAFVDK------------- 176
L +++ GI+P+ ++Y+T I+K VDK
Sbjct: 239 ALRLVEEM-KGYGIKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYMAPTDNSIFXRL 297
Query: 177 -------GSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
G+LD+A +L M + + + + L+ F G+ A K+ + ++ ++
Sbjct: 298 ISSQCKTGNLDAAADVLKAMIRLSVPTEAGHYGVLIENFCKAGQHDKAVKLLDKLIEKDI 357
Query: 230 --RPNV------RSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
RP +YN ++ L QT KA LV ++ + D LI+G E
Sbjct: 358 ILRPQSTLHMEPSAYNPMIEYLCNNGQTAKAEALVRQLLKLGVQ-DPTALNTLIRGHSQE 416
Query: 282 GNLEEA 287
G+ + A
Sbjct: 417 GSPDSA 422
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 88/204 (43%), Gaps = 17/204 (8%)
Query: 37 LKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTA 96
LK +VDK+ +D I+ + ++L+ + ++ G
Sbjct: 278 LKEMVDKYMAPTD-------NSIFXRLISSQCKTGNLDAAADVLKAMIRLSVPTEAGHYG 330
Query: 97 RLIALYGKAAMFENARKVFDEM--------PGRNCEQTVLSFNALLGACVNSKKFDEVDG 148
LI + KA + A K+ D++ P ++N ++ N+ + + +
Sbjct: 331 VLIENFCKAGQHDKAVKLLDKLIEKDIILRPQSTLHMEPSAYNPMIEYLCNNGQTAKAEA 390
Query: 149 LFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
L + L KLG++ D + NT+I+ +GS DSA LL M ++ + + +++L+ +
Sbjct: 391 LVRQLL-KLGVQ-DPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYDSLVQSY 448
Query: 209 YSNGRFADAEKIWETMVNMNVRPN 232
ADA+ ++M+ + P+
Sbjct: 449 LKKNEPADAKAALDSMIENDHLPD 472
>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 719
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 148/312 (47%), Gaps = 16/312 (5%)
Query: 55 TNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTAR------LIALYGKAAMF 108
+N ++ ++ A++ R E + + + +G+T LI +
Sbjct: 153 SNDSVFDLLIRTFVQARKLR------EAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWV 206
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
E A +++ E+ V + N ++ A K ++V ++ K G+ PD+V+YNT
Sbjct: 207 ELAWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEK-GVYPDIVTYNT 265
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
+I A+ +G ++ A L++ M KG + T+NT++ G +G++ A++++ M+
Sbjct: 266 LISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG 325
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
+ P+ +Y + L + + + +MRS+++ PD+ F +++ F GNL++A
Sbjct: 326 LSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKAL 385
Query: 289 RWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRL 345
++N ++G + I+ +L+ C KG + A NL + C +D ++ L
Sbjct: 386 MYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGL 445
Query: 346 AKELRVEEAKEL 357
K + EA +L
Sbjct: 446 CKRKMLGEADKL 457
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 99/196 (50%), Gaps = 1/196 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI Y + M A + +EM + C V+++N +L K E D LF ++ +
Sbjct: 406 LIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTER- 464
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ PD + +I G+L +A L +M++K I+LD++T+NTLL GF G A
Sbjct: 465 GLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTA 524
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++IW MV+ + P S++ ++ L + +A + EM SK I P V ++IKG
Sbjct: 525 KEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKG 584
Query: 278 FVNEGNLEEAKRWYNK 293
+ GN + + + K
Sbjct: 585 YCRSGNASDGEIFLEK 600
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 117/252 (46%), Gaps = 19/252 (7%)
Query: 103 GKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPD 162
G A EN +F +M R+ ++ F++++ S D+ F + G+ PD
Sbjct: 344 GDAVETEN---IFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEA-GLIPD 399
Query: 163 LVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWE 222
V Y +I+ + KG + A L EM ++G +D++T+NT+L G +A+K++
Sbjct: 400 NVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFN 459
Query: 223 TMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEG 282
M + P+ + +DG + A+EL +M+ K I DV T+ L+ GF G
Sbjct: 460 EMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVG 519
Query: 283 NLEEAKR-WYNKSGCGMNKAI------FKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQ 335
+++ AK W + ++K I F +LV +C KG L AF R + E
Sbjct: 520 DIDTAKEIWADM----VSKEILPTPISFSILVNALCSKGHLSEAF----RVWDEMISKSI 571
Query: 336 APLQLVVDRLAK 347
P ++ + + K
Sbjct: 572 KPTVMICNSMIK 583
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 103/194 (53%), Gaps = 3/194 (1%)
Query: 102 YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEP 161
+GK + A++++ +M + T +SF+ L+ A + E ++ ++ K I+P
Sbjct: 515 FGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISK-SIKP 573
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
++ N++IK + G+ L +M +G D I++NTL+ GF + A +
Sbjct: 574 TVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLV 633
Query: 222 ETMVNMN--VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFV 279
+ M + P+V +YN+ L G E Q K+A ++ +M + +NPD T+ +LI GFV
Sbjct: 634 KKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFV 693
Query: 280 NEGNLEEAKRWYNK 293
++ NL EA R++++
Sbjct: 694 SQDNLTEAFRFHDE 707
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 117/240 (48%), Gaps = 10/240 (4%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K +NA ++F +M + + V+++N LL D ++ D+ K
Sbjct: 476 LIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSK- 534
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
I P +S++ ++ A KG L A + EM K I+ ++ N+++ G+ +G +D
Sbjct: 535 EILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDG 594
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE--INPDVFTFYALI 275
E E M++ P+ SYN + G E+ KA LV +M K+ + PDVFT+ +++
Sbjct: 595 EIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSIL 654
Query: 276 KGFVNEGNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAF----NLCKRTFS 328
GF E ++EA+ R + G +++ + L+ + +L AF + +R FS
Sbjct: 655 HGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFS 714
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 119/251 (47%), Gaps = 20/251 (7%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
+I G K NL+ ++ FKK + R + + Y + +EI
Sbjct: 476 LIDGHCKLGNLQNAMELFKKMKE-KRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADM--- 531
Query: 87 KDISKE------GFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVN 139
+SKE F+ + AL K + E A +V+DEM ++ + TV+ N+++ G C
Sbjct: 532 --VSKEILPTPISFSILVNALCSKGHLSE-AFRVWDEMISKSIKPTVMICNSMIKGYC-- 586
Query: 140 SKKFDEVDG-LFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKK--GIRL 196
+ + DG +F + G PD +SYNT+I FV + ++ A L+ +ME+K G+
Sbjct: 587 -RSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVP 645
Query: 197 DLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELV 256
D+ T+N++L GF + +AE + M+ V P+ +Y + ++G + +A
Sbjct: 646 DVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFH 705
Query: 257 GEMRSKEINPD 267
EM + +PD
Sbjct: 706 DEMLQRGFSPD 716
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/315 (20%), Positives = 131/315 (41%), Gaps = 16/315 (5%)
Query: 54 RTNTGIYTGTVQRLANA--------KRFRWIEEILEHQKQYKDISKEGFTARLIALYGKA 105
R+ G+ T+ + NA K ++ E+ E + Y DI LI+ Y
Sbjct: 218 RSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQE-KGVYPDIVTYN---TLISAYSSQ 273
Query: 106 AMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVS 165
+ E A ++ MP + V ++N ++ K++ +F ++ G+ PD +
Sbjct: 274 GLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRS-GLSPDSTT 332
Query: 166 YNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMV 225
Y +++ KG + +M + + DL+ F++++ F +G A + ++
Sbjct: 333 YRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVK 392
Query: 226 NMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLE 285
+ P+ Y + G + +A+ L EM + DV T+ ++ G L
Sbjct: 393 EAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLG 452
Query: 286 EAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVV 342
EA + +N + G + +L+ C+ G+L A L K+ +R +D ++
Sbjct: 453 EADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLL 512
Query: 343 DRLAKELRVEEAKEL 357
D K ++ AKE+
Sbjct: 513 DGFGKVGDIDTAKEI 527
>gi|449518511|ref|XP_004166285.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 128/258 (49%), Gaps = 4/258 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+A+ + ++E AR +F+EM R +Q V ++N LL A + D + ++P K
Sbjct: 299 LLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGK- 357
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
I P++V+Y+T+ + G L+ A L EM+ GI LD +++NTLL + GRF DA
Sbjct: 358 KILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDA 417
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
K+ + M + V+ +V +YNA LDG + + + + EM+ + P++ T+ LI
Sbjct: 418 LKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDV 477
Query: 278 FVNEGNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
+ EEA R + ++G + ++ L+ +C+ G +D A L E +
Sbjct: 478 YSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPN 537
Query: 335 QAPLQLVVDRLAKELRVE 352
++D + E
Sbjct: 538 VVTYNSIIDAFGRSTTAE 555
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 128/265 (48%), Gaps = 7/265 (2%)
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
+ +I+ G+ E A+ VF+ TV +F+AL+ A S FDE +F+ +
Sbjct: 189 LASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESM 248
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANT--LLYEMEKKGIRLDLITFNTLLLGFYSN 211
G++P+LV+YN +I A KG ++ + EM + G++ D IT+N+LL
Sbjct: 249 KVS-GLKPNLVTYNAVIDA-CGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRG 306
Query: 212 GRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTF 271
G + A ++ M++ + +V +YN LD + Q A E++ EM K+I P+V T+
Sbjct: 307 GLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTY 366
Query: 272 YALIKGFVNEGNLEEAKRWYNKS---GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFS 328
+ G+ G LE+A YN+ G G+++ + L+ + G + A +CK S
Sbjct: 367 STMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGS 426
Query: 329 ERCLVDQAPLQLVVDRLAKELRVEE 353
D ++D K+ + E
Sbjct: 427 SGVKKDVVTYNALLDGYGKQGKFNE 451
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 129/273 (47%), Gaps = 14/273 (5%)
Query: 93 GFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSK-KFDEVDGLFK 151
F+A LI+ YGK+ F+ A KVF+ M + ++++NA++ AC +F V +F+
Sbjct: 224 AFSA-LISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVEFKRVVEIFE 282
Query: 152 DLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSN 211
++ G++PD ++YN+++ G ++A L EM +GI D+ T+NTLL
Sbjct: 283 EMLRN-GVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKG 341
Query: 212 GRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTF 271
G+ A +I M + PNV +Y+ DG A + + AL L EM+ I D ++
Sbjct: 342 GQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSY 401
Query: 272 YALIKGFVNEGNLEEAKRW---YNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFS 328
L+ + G E+A + SG + + L+ ++G FN R F
Sbjct: 402 NTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGK----FNEVTRVFK 457
Query: 329 E----RCLVDQAPLQLVVDRLAKELRVEEAKEL 357
E R + ++D +K EEA E+
Sbjct: 458 EMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEV 490
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 102/195 (52%), Gaps = 22/195 (11%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+++Y K FE+A KV EM ++ V+++NALL KF+EV +FK++ K
Sbjct: 404 LLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEM-KKD 462
Query: 158 GIEPDLVSYNTIIKAFVDKGSL-DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
+ P+L++Y+T+I + KGSL + A + E ++ G++ D++ ++ L+ NG
Sbjct: 463 RVFPNLLTYSTLIDVY-SKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDS 521
Query: 217 AEKIWETMVNMNVRPNVRSYNARLD---------------GLAIEKQTKK-ALELVGEMR 260
A + + M +RPNV +YN+ +D G + E+Q++ L+ +
Sbjct: 522 AVLLLDEMTKEGIRPNVVTYNSIIDAFGRSTTAEFLVDGVGASNERQSESPTFMLIEGVD 581
Query: 261 SKEINPD---VFTFY 272
EIN D VF FY
Sbjct: 582 ESEINWDDGHVFKFY 596
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 79/164 (48%), Gaps = 4/164 (2%)
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEK-QTKKALELV 256
+ F+ L+ + +G F +A K++E+M ++PN+ +YNA +D + K+ +E+
Sbjct: 222 VFAFSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVEFKRVVEIF 281
Query: 257 GEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEK 313
EM + PD T+ +L+ G E A+ +N+ G + + L+ VC+
Sbjct: 282 EEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKG 341
Query: 314 GDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
G +D A+ + ++ L + + D AK R+E+A L
Sbjct: 342 GQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNL 385
>gi|449436409|ref|XP_004135985.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 128/258 (49%), Gaps = 4/258 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+A+ + ++E AR +F+EM R +Q V ++N LL A + D + ++P K
Sbjct: 299 LLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGK- 357
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
I P++V+Y+T+ + G L+ A L EM+ GI LD +++NTLL + GRF DA
Sbjct: 358 KILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDA 417
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
K+ + M + V+ +V +YNA LDG + + + + EM+ + P++ T+ LI
Sbjct: 418 LKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDV 477
Query: 278 FVNEGNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
+ EEA R + ++G + ++ L+ +C+ G +D A L E +
Sbjct: 478 YSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPN 537
Query: 335 QAPLQLVVDRLAKELRVE 352
++D + E
Sbjct: 538 VVTYNSIIDAFGRSTTAE 555
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 128/265 (48%), Gaps = 7/265 (2%)
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
+ +I+ G+ E A+ VF+ TV +F+AL+ A S FDE +F+ +
Sbjct: 189 LASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESM 248
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANT--LLYEMEKKGIRLDLITFNTLLLGFYSN 211
G++P+LV+YN +I A KG ++ + EM + G++ D IT+N+LL
Sbjct: 249 KVS-GLKPNLVTYNAVIDA-CGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRG 306
Query: 212 GRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTF 271
G + A ++ M++ + +V +YN LD + Q A E++ EM K+I P+V T+
Sbjct: 307 GLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTY 366
Query: 272 YALIKGFVNEGNLEEAKRWYNKS---GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFS 328
+ G+ G LE+A YN+ G G+++ + L+ + G + A +CK S
Sbjct: 367 STMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGS 426
Query: 329 ERCLVDQAPLQLVVDRLAKELRVEE 353
D ++D K+ + E
Sbjct: 427 SGVKKDVVTYNALLDGYGKQGKFNE 451
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 129/273 (47%), Gaps = 14/273 (5%)
Query: 93 GFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSK-KFDEVDGLFK 151
F+A LI+ YGK+ F+ A KVF+ M + ++++NA++ AC +F V +F+
Sbjct: 224 AFSA-LISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVEFKRVVEIFE 282
Query: 152 DLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSN 211
++ G++PD ++YN+++ G ++A L EM +GI D+ T+NTLL
Sbjct: 283 EMLRN-GVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKG 341
Query: 212 GRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTF 271
G+ A +I M + PNV +Y+ DG A + + AL L EM+ I D ++
Sbjct: 342 GQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSY 401
Query: 272 YALIKGFVNEGNLEEAKRW---YNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFS 328
L+ + G E+A + SG + + L+ ++G FN R F
Sbjct: 402 NTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGK----FNEVTRVFK 457
Query: 329 E----RCLVDQAPLQLVVDRLAKELRVEEAKEL 357
E R + ++D +K EEA E+
Sbjct: 458 EMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEV 490
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 103/195 (52%), Gaps = 22/195 (11%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+++Y K FE+A KV EM ++ V+++NALL KF+EV +FK++ K
Sbjct: 404 LLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEM-KKD 462
Query: 158 GIEPDLVSYNTIIKAFVDKGSL-DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
+ P+L++Y+T+I + KGSL + A + E ++ G++ D++ ++ L+ NG
Sbjct: 463 RVFPNLLTYSTLIDVY-SKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDS 521
Query: 217 AEKIWETMVNMNVRPNVRSYNARLD---------------GLAIEKQTKK-ALELVGEMR 260
A + + M +RPNV +YN+ +D G + E+Q++ + L+ +
Sbjct: 522 AVLLLDEMTKEGIRPNVVTYNSIIDAFGRSTTAEFLVDGVGASNERQSESPSFMLIEGVD 581
Query: 261 SKEINPD---VFTFY 272
EIN D VF FY
Sbjct: 582 ESEINWDDGHVFKFY 596
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 79/164 (48%), Gaps = 4/164 (2%)
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEK-QTKKALELV 256
+ F+ L+ + +G F +A K++E+M ++PN+ +YNA +D + K+ +E+
Sbjct: 222 VFAFSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVEFKRVVEIF 281
Query: 257 GEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEK 313
EM + PD T+ +L+ G E A+ +N+ G + + L+ VC+
Sbjct: 282 EEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKG 341
Query: 314 GDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
G +D A+ + ++ L + + D AK R+E+A L
Sbjct: 342 GQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNL 385
>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 729
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 147/312 (47%), Gaps = 16/312 (5%)
Query: 55 TNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTAR------LIALYGKAAMF 108
+N ++ ++ A++ R E + + + +GFT LI +
Sbjct: 163 SNDSVFDLLIRTYVQARKLR------EAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWV 216
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
E A V+ E+ V + N ++ A K ++V G F + G+ PD+V+YNT
Sbjct: 217 ELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKV-GTFLSQVQEKGVYPDIVTYNT 275
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
+I A+ KG ++ A L+ M KG + T+NT++ G +G++ A++++ M+
Sbjct: 276 LISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG 335
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
+ P+ +Y + L + + ++ +MRS+++ PD+ F +++ F GNL++A
Sbjct: 336 LSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKAL 395
Query: 289 RWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRL 345
++N ++G + I+ +L+ C KG + A NL + C +D ++ L
Sbjct: 396 MYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGL 455
Query: 346 AKELRVEEAKEL 357
K + EA +L
Sbjct: 456 CKRKMLGEADKL 467
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 98/196 (50%), Gaps = 1/196 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI Y + M A + +EM + C V+++N +L K E D LF ++ +
Sbjct: 416 LIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTER- 474
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
+ PD + +I G+L +A L +M++K IRLD++T+NTLL GF G A
Sbjct: 475 ALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTA 534
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++IW MV+ + P SY+ ++ L + +A + EM SK I P V ++IKG
Sbjct: 535 KEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKG 594
Query: 278 FVNEGNLEEAKRWYNK 293
+ GN + + + K
Sbjct: 595 YCRSGNASDGESFLEK 610
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 115/242 (47%), Gaps = 16/242 (6%)
Query: 113 KVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKA 172
KVF +M R+ ++ F++++ S D+ F + G+ PD V Y +I+
Sbjct: 361 KVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEA-GLIPDNVIYTILIQG 419
Query: 173 FVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPN 232
+ KG + A L EM ++G +D++T+NT+L G +A+K++ M + P+
Sbjct: 420 YCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPD 479
Query: 233 VRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR-WY 291
+ +DG + A+EL +M+ K I DV T+ L+ GF G+++ AK W
Sbjct: 480 SYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWA 539
Query: 292 NKSGCGMNKAI------FKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRL 345
+ ++K I + +LV +C KG L AF R + E + P ++ + +
Sbjct: 540 DM----VSKEILPTPISYSILVNALCSKGHLAEAF----RVWDEMISKNIKPTVMICNSM 591
Query: 346 AK 347
K
Sbjct: 592 IK 593
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 102/194 (52%), Gaps = 3/194 (1%)
Query: 102 YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEP 161
+GK + A++++ +M + T +S++ L+ A + E ++ ++ K I+P
Sbjct: 525 FGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISK-NIKP 583
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
++ N++IK + G+ + L +M +G D I++NTL+ GF + A +
Sbjct: 584 TVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLV 643
Query: 222 ETMV--NMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFV 279
+ M + P+V +YN+ L G + Q K+A ++ +M + +NPD T+ +I GFV
Sbjct: 644 KKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFV 703
Query: 280 NEGNLEEAKRWYNK 293
++ NL EA R +++
Sbjct: 704 SQDNLTEAFRIHDE 717
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 117/250 (46%), Gaps = 18/250 (7%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
+I G K NL+ ++ F+K + R R + Y + +EI
Sbjct: 486 LIDGHCKLGNLQNAMELFQKMKE-KRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADM--- 541
Query: 87 KDISKE------GFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVN 139
+SKE ++ + AL K + E A +V+DEM +N + TV+ N+++ G C +
Sbjct: 542 --VSKEILPTPISYSILVNALCSKGHLAE-AFRVWDEMISKNIKPTVMICNSMIKGYCRS 598
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKK--GIRLD 197
D L K + G PD +SYNT+I FV + ++ A L+ +ME++ G+ D
Sbjct: 599 GNASDGESFLEKMISE--GFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPD 656
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
+ T+N++L GF + +AE + M+ V P+ +Y ++G + +A +
Sbjct: 657 VFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHD 716
Query: 258 EMRSKEINPD 267
EM + +PD
Sbjct: 717 EMLQRGFSPD 726
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/315 (20%), Positives = 134/315 (42%), Gaps = 16/315 (5%)
Query: 54 RTNTGIYTGTVQRLANA----KRFRWIEEILEHQKQYKDISKEGFTAR-LIALYGKAAMF 108
R+ GI T+ + NA + + L Q Q K + + T LI+ Y +
Sbjct: 228 RSGVGINVYTLNIMVNALCKDGKMEKVGTFLS-QVQEKGVYPDIVTYNTLISAYSSKGLM 286
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
E A ++ + MPG+ V ++N ++ K++ +F ++ G+ PD +Y +
Sbjct: 287 EEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRS-GLSPDSTTYRS 345
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
++ KG + + +M + + DL+ F++++ F +G A + ++
Sbjct: 346 LLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG 405
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
+ P+ Y + G + A+ L EM + DV T+ ++ G L EA
Sbjct: 406 LIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEAD 465
Query: 289 RWYNKSGCGMNKAIF------KLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVV 342
+ +N+ +A+F +L+ C+ G+L A L ++ +R +D ++
Sbjct: 466 KLFNEM---TERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLL 522
Query: 343 DRLAKELRVEEAKEL 357
D K ++ AKE+
Sbjct: 523 DGFGKVGDIDTAKEI 537
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 118/236 (50%), Gaps = 8/236 (3%)
Query: 101 LYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIE 160
L+ KA+ A + D+M R C+ ++++ ++ D L K + K IE
Sbjct: 200 LHNKAS---EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKM-EKGKIE 255
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
D+V YNTII +D A L EM+ KGIR D+ T+++L+ + GR++DA ++
Sbjct: 256 ADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRL 315
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
M+ + PNV +++A +D E + +A +L EM + I+PD+FT+ +LI GF
Sbjct: 316 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 375
Query: 281 EGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV 333
L+EAK + C N + L+ C+ ++ L R S+R LV
Sbjct: 376 HDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELF-REMSQRGLV 430
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 154/307 (50%), Gaps = 13/307 (4%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRF----RWIEEILE 81
++I G+ K ++ ++ F + + G R + Y+ + L N R+ R + +++E
Sbjct: 263 TIIDGLCKYKHMDDALNLFTEMDNKG-IRPDVFTYSSLISCLCNYGRWSDASRLLSDMIE 321
Query: 82 HQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSK 141
+ ++ F+A LI + K A K++DEM R+ + + ++++L+
Sbjct: 322 RKINPNVVT---FSA-LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 377
Query: 142 KFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITF 201
+ DE +F+ + K P++V+Y+T+IK F ++ L EM ++G+ + +T+
Sbjct: 378 RLDEAKHMFELMISK-DCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 436
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS 261
TL+ GF+ +A+ +++ MV++ V PN+ +YN LDGL + KA+ + ++
Sbjct: 437 TTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQR 496
Query: 262 KEINPDVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDF 318
+ PD++T+ +I+G G +E+ + + G N + ++ C KG +
Sbjct: 497 STMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEE 556
Query: 319 AFNLCKR 325
A +L K+
Sbjct: 557 ADSLLKK 563
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 108/217 (49%), Gaps = 4/217 (1%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
++A +F +M +++ FN LL A KF+ V L + + LGI DL +Y+
Sbjct: 65 DDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQM-QTLGISHDLYTYSI 123
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
I F + L A +L +M K G D++T ++LL G+ + R +DA + + MV M
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
+P+ ++ + GL + + +A+ LV +M + PD+ T+ ++ G G+++ A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 289 RWYNKSGCGMNKA---IFKLLVPFVCEKGDLDFAFNL 322
K G +A I+ ++ +C+ +D A NL
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNL 280
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 129/317 (40%), Gaps = 40/317 (12%)
Query: 80 LEHQKQYKDISKEGFTARL-IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACV 138
L Q Q IS + +T + I + + + A V +M E +++ ++LL
Sbjct: 105 LGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYC 164
Query: 139 NSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL 198
+SK+ + L + ++G +PD ++ T+I A L+ +M ++G + DL
Sbjct: 165 HSKRISDAVALVDQMV-EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDL 223
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
+T+ T++ G G A + + M + +V YN +DGL K AL L E
Sbjct: 224 VTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTE 283
Query: 259 MRSKEINPDVF-----------------------------------TFYALIKGFVNEGN 283
M +K I PDVF TF ALI FV EG
Sbjct: 284 MDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 343
Query: 284 LEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL 340
L EA++ Y+ K + + L+ C LD A ++ + S+ C +
Sbjct: 344 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYST 403
Query: 341 VVDRLAKELRVEEAKEL 357
++ K RVEE EL
Sbjct: 404 LIKGFCKAKRVEEGMEL 420
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 104/232 (44%), Gaps = 2/232 (0%)
Query: 56 NTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVF 115
N Y+ ++ AKR E+ Q + LI + +A +NA+ VF
Sbjct: 397 NVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 456
Query: 116 DEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVD 175
+M +L++N LL + K + +F+ L + +EPD+ +YN +I+
Sbjct: 457 KQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYL-QRSTMEPDIYTYNIMIEGMCK 515
Query: 176 KGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRS 235
G ++ L + KG+ ++I +NT++ GF G +A+ + + M PN +
Sbjct: 516 AGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGT 575
Query: 236 YNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
YN + + + + EL+ EMRS D T L+ +++G L+++
Sbjct: 576 YNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI-GLVTNMLHDGRLDKS 626
>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Brachypodium distachyon]
Length = 757
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 143/318 (44%), Gaps = 6/318 (1%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMP 119
+ + L A++ R +LE E L+ + + E A ++ M
Sbjct: 199 FNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMS 258
Query: 120 GRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGS 178
C T ++ N L+ G C + D + + +++ G EPD V+++T + G
Sbjct: 259 EMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIAD--GFEPDRVTFSTFVNGLCQNGH 316
Query: 179 LDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNA 238
+D A +L M ++G D+ T++T++ +NG +A+ I MV+ P+ ++N
Sbjct: 317 VDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNT 376
Query: 239 RLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SG 295
+ L E Q ++AL+L E+ K ++P+V+TF LI G+ A R + + SG
Sbjct: 377 LIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSG 436
Query: 296 CGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAK 355
C ++ + +L+ +C G L A +L K C ++D L K R+EEA+
Sbjct: 437 CTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAE 496
Query: 356 ELVELGKTNSYCRYNLKF 373
E+ + R + F
Sbjct: 497 EVFDQMDVTGIGRNAITF 514
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 117/261 (44%), Gaps = 4/261 (1%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
++A KV M CE V +++ ++ N+ + +E G+ + G PD ++NT
Sbjct: 318 DHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDS-GCLPDTTTFNT 376
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
+I A + L+ A L E+ KG+ ++ TFN L+ G A +++E M +
Sbjct: 377 LIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSG 436
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
P+ +YN +D L + KAL+L+ EM T+ +I G +EEA+
Sbjct: 437 CTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAE 496
Query: 289 RWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRL 345
+++ +G G N F L+ +C +D A L + SE + ++
Sbjct: 497 EVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHY 556
Query: 346 AKELRVEEAKELVELGKTNSY 366
K+ + +A ++++ N +
Sbjct: 557 CKQGNISKAADILQTMTANGF 577
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 85/175 (48%), Gaps = 1/175 (0%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
E A +VFD+M + ++FN L+ N+++ D+ L + + G++P+ V+YN
Sbjct: 492 IEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISE-GLQPNNVTYN 550
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
+I+ + +G++ A +L M G +D++T+ TL+ G R A K+ M
Sbjct: 551 SILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMK 610
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEG 282
++P ++YN + L + AL L EM PD FT+ + +G G
Sbjct: 611 GMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLCRGG 665
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 87/180 (48%), Gaps = 1/180 (0%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
E A + E+ + V +FN L+ A LF+++ G PD V+YN
Sbjct: 387 LEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSS-GCTPDEVTYN 445
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
+I G L A LL EME G +T+NT++ G R +AE++++ M
Sbjct: 446 ILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVT 505
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+ N ++N +DGL ++ A ELV +M S+ + P+ T+ +++ + +GN+ +A
Sbjct: 506 GIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKA 565
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 83/168 (49%), Gaps = 1/168 (0%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A ++F+EM C +++N L+ +S K + L K++ G V+YNTII
Sbjct: 425 AVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVS-GCPQSTVTYNTII 483
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
+ ++ A + +M+ GI + ITFNTL+ G + R DA ++ + M++ ++
Sbjct: 484 DGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQ 543
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGF 278
PN +YN+ L + KA +++ M + DV T+ LI G
Sbjct: 544 PNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGL 591
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 108/264 (40%), Gaps = 3/264 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I G A F+ + + EM E + + +G+ + FD+ L +
Sbjct: 96 IIRKLGTAGAFDLMKVLVGEMRREGHEVGLGLVQSFIGSYARLQLFDDAFDLVSNQLDMF 155
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++ + YN ++ + + + EM +GI D++TFNT++ + A
Sbjct: 156 GVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTA 215
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ E M + +V P+ ++ ++G E + AL L M +P T LI G
Sbjct: 216 VLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLING 275
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
+ G + +A + + G ++ F V +C+ G +D A + E C D
Sbjct: 276 YCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPD 335
Query: 335 QAPLQLVVDRLAKELRVEEAKELV 358
V++ L +EEAK +V
Sbjct: 336 VYTYSTVINCLCNNGELEEAKGIV 359
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 99/207 (47%), Gaps = 4/207 (1%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A + EM C Q+ +++N ++ ++ +E + +F + GI + +++NT+I
Sbjct: 460 ALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQM-DVTGIGRNAITFNTLI 518
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
+ +D A L+ +M +G++ + +T+N++L + G + A I +TM
Sbjct: 519 DGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFE 578
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK-- 288
+V +Y ++GL ++T+ AL+L+ MR K + P + +I+ N +A
Sbjct: 579 VDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSL 638
Query: 289 -RWYNKSGCGMNKAIFKLLVPFVCEKG 314
R + G + +K++ +C G
Sbjct: 639 FREMTEVGGPPDAFTYKIVFRGLCRGG 665
>gi|255660892|gb|ACU25615.1| pentatricopeptide repeat-containing protein [Glandularia araucana]
Length = 481
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 116/237 (48%), Gaps = 5/237 (2%)
Query: 92 EGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFK 151
E +I YGK + + + K+F +M E+T+ S+NAL + ++ F
Sbjct: 80 EDMWVMMIDSYGKQGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFN 139
Query: 152 DLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSN 211
+ + GIEP ++N +I F G +++AN +M+ + I D++T+NT++ G+Y
Sbjct: 140 KMLSE-GIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRV 198
Query: 212 GRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTF 271
+ +AEK + M N+ P V +Y + G Q AL LV EM+ I P+ T+
Sbjct: 199 KKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITY 258
Query: 272 YALIKGFVNEGNLEEA----KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCK 324
L+ G N + EA K +K + +IF L+ C+ G+LD A ++ K
Sbjct: 259 STLLPGLCNAEKMSEARVXLKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLK 315
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 85/167 (50%), Gaps = 4/167 (2%)
Query: 125 QTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANT 184
+T L +LG + K + + D+P K G+E D + +I ++ +G + +
Sbjct: 46 ETHLKIIEILG---RASKLNHARCILLDMPKK-GLEWDEDMWVMMIDSYGKQGIVQESVK 101
Query: 185 LLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLA 244
+ +ME+ G+ + ++N L GR+ A++ + M++ + P ++N + G
Sbjct: 102 MFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFF 161
Query: 245 IEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY 291
+ + + A +M+S+EI+PDV T+ +I G+ +EEA++++
Sbjct: 162 LSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYF 208
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 99/234 (42%), Gaps = 46/234 (19%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I Y + E A K F EM GRN E TV+++ L+ V+ + D+ L +++
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEM-KGF 249
Query: 158 GIEPDLVSYNTII----------------KAFVDK--------------------GSLDS 181
GI+P+ ++Y+T++ K +DK G+LD+
Sbjct: 250 GIKPNAITYSTLLPGLCNAEKMSEARVXLKEMMDKYLAPTDNSIFMRLISSHCKSGNLDA 309
Query: 182 ANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV--RPNV------ 233
A +L M + + + + L+ F G++ A K+ + ++ ++ RP
Sbjct: 310 AADVLKAMXRLSVPTEAGHYGVLIENFCKXGQYDKAVKLLDKLIEKDIILRPQSTLHLEP 369
Query: 234 RSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+YN ++ L Q KA LV ++ + D LI+G EG+ + A
Sbjct: 370 SAYNPMIEYLCNNGQAAKAETLVRQLLKLGVQ-DPTALNTLIRGHSQEGSPDSA 422
Score = 41.2 bits (95), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 40/204 (19%), Positives = 88/204 (43%), Gaps = 17/204 (8%)
Query: 37 LKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTA 96
LK ++DK+ +D I+ + + ++L+ + ++ G
Sbjct: 278 LKEMMDKYLAPTD-------NSIFMRLISSHCKSGNLDAAADVLKAMXRLSVPTEAGHYG 330
Query: 97 RLIALYGKAAMFENARKVFDEM--------PGRNCEQTVLSFNALLGACVNSKKFDEVDG 148
LI + K ++ A K+ D++ P ++N ++ N+ + + +
Sbjct: 331 VLIENFCKXGQYDKAVKLLDKLIEKDIILRPQSTLHLEPSAYNPMIEYLCNNGQAAKAET 390
Query: 149 LFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
L + L KLG++ D + NT+I+ +GS DSA LL M ++ + + +N+L+ +
Sbjct: 391 LVRQLL-KLGVQ-DPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSXYNSLVQSY 448
Query: 209 YSNGRFADAEKIWETMVNMNVRPN 232
DA+ ++M+ + P+
Sbjct: 449 LKKNEPXDAKAALDSMIENDHLPD 472
Score = 38.1 bits (87), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 96/248 (38%), Gaps = 17/248 (6%)
Query: 39 RLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEIL-EHQKQYKDISKEGFTAR 97
RLV++ K + N Y+ + L NA++ L E +Y + R
Sbjct: 241 RLVEEMKGFG----IKPNAITYSTLLPGLCNAEKMSEARVXLKEMMDKYLAPTDNSIFMR 296
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHK- 156
LI+ + K+ + A V M + + L+ ++D+ L L K
Sbjct: 297 LISSHCKSGNLDAAADVLKAMXRLSVPTEAGHYGVLIENFCKXGQYDKAVKLLDKLIEKD 356
Query: 157 --------LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
L +EP +YN +I+ + G A TL+ ++ K G++ D NTL+ G
Sbjct: 357 IILRPQSTLHLEPS--AYNPMIEYLCNNGQAAKAETLVRQLLKLGVQ-DPTALNTLIRGH 413
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDV 268
G A ++ + M+ V YN+ + + + A + M + PD
Sbjct: 414 SQEGSPDSAFELLKIMLRRKVDSEKSXYNSLVQSYLKKNEPXDAKAALDSMIENDHLPDS 473
Query: 269 FTFYALIK 276
F ++++
Sbjct: 474 SLFRSVME 481
>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
Length = 651
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 145/338 (42%), Gaps = 44/338 (13%)
Query: 25 GSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEH-Q 83
G +IRG +L + ++ G F N ++T ++ L +A R + E LEH +
Sbjct: 13 GILIRGFSSAGDLDIAIQLLEEMKSNG-FEGNAVVHTTLMKGLCDAGR---VVEALEHFR 68
Query: 84 KQYKDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GAC---- 137
KD + + T L+ KA F+ A+ + EM R C ++F+ L+ G C
Sbjct: 69 AMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGS 128
Query: 138 ----------VNSKKFDEVDGLFKDLPHKL--------------------GIEPDLVSYN 167
V + D F+ + +L G P ++ +N
Sbjct: 129 EEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFN 188
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
+I F LDSA LL M +KG ++ TF L+ G R +A+++ E MV
Sbjct: 189 LVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTG 248
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
PNV +Y+ ++GL + Q A EL M + P+V T LI G +EEA
Sbjct: 249 GCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEA 308
Query: 288 KRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
++ Y++ +GC + + L+ +C+ +D AF L
Sbjct: 309 RQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQL 346
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 119/299 (39%), Gaps = 41/299 (13%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + A + A ++ +EM E + L+ ++ + E F+ +
Sbjct: 15 LIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAKDC 74
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
PD+++Y ++ A G D A +L EM +G D +TF+TL+ G G A
Sbjct: 75 A--PDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSEEQA 132
Query: 218 EKIWETMVNMNV------------------------------------RPNVRSYNARLD 241
++ E ++ + P V +N ++
Sbjct: 133 FRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVIN 192
Query: 242 GLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGM 298
G K A +L+ M K P+VFTF LI G + EA++ K GC
Sbjct: 193 GFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSP 252
Query: 299 NKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
N + ++ +C++G +D A+ L + C + +++D L K R+EEA++L
Sbjct: 253 NVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQL 311
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 113/263 (42%), Gaps = 17/263 (6%)
Query: 44 FKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYK---------DISKEGF 94
F + LGR I++ V + + + ILE+ K + +++ +GF
Sbjct: 367 FHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGF 426
Query: 95 TAR---LIALYG---KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDG 148
R L A+ G + E A ++FD M R C L +N ++ + K ++
Sbjct: 427 PPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALA 486
Query: 149 LFKDLPHKLG--IEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLL 206
+ + + K P + + ++++ G D A LL++M ++G + ++N LL
Sbjct: 487 VLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLS 546
Query: 207 GFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINP 266
G R+ +A +++E MV+ P + + N + L + A ELV M P
Sbjct: 547 GLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCP 606
Query: 267 DVFTFYALIKGFVNEGNLEEAKR 289
D+ T LI G+ G + A++
Sbjct: 607 DIETCNTLIGGYCKSGRADLARK 629
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 106/238 (44%), Gaps = 17/238 (7%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
KA E AR+++ M C ++++N+L+ S + DE LF+ +P +
Sbjct: 301 KAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANA 360
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
V+Y+T+ + G + A + + KG DL T+ +L+L + R + ++ E
Sbjct: 361 VTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEE 420
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGF----- 278
M + P V + +A L GL T++A++L M ++ D + +++G
Sbjct: 421 MASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASK 480
Query: 279 ------VNEGNLEEAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSER 330
V E +++ R +N S ++ LV +C+ G D A L + SER
Sbjct: 481 HNKALAVLEQVIDKRDRKFNPSSSAVDA-----LVESLCQVGRTDDAKQLLHK-MSER 532
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 99/238 (41%), Gaps = 40/238 (16%)
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
P+ +Y +I+ F G LD A LL EM+ G + + TL+ G GR +A +
Sbjct: 7 PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEH 66
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
+ M + P+V +Y A + L + +A ++ EM ++ PD TF LI G
Sbjct: 67 FRAMAK-DCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCK 125
Query: 281 EGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEK------------------------ 313
G+ E+A R + G G + A F+ ++ +C K
Sbjct: 126 FGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVL 185
Query: 314 ------------GDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
DLD A+ L + + C+ + +++ L K RV EA++L+E
Sbjct: 186 MFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLE 243
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 102/218 (46%), Gaps = 7/218 (3%)
Query: 24 IGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANA----KRFRWIEEI 79
+ +V+ G+++ N+ +R + F + G + IY V+ +A A K +E++
Sbjct: 433 LSAVLGGLFEGNHTERAIQLFDSMAARG-CTDDALIYNLVVEGMARASKHNKALAVLEQV 491
Query: 80 LEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
++ + + + S A L+ + ++A+++ +M R V S+N LL
Sbjct: 492 IDKRDRKFNPSSSAVDA-LVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSR 550
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
+++DE +F+ + G P++ + N +I +D A L+ M K G D+
Sbjct: 551 LQRWDEATQVFEAMVSA-GPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIE 609
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYN 237
T NTL+ G+ +GR A K+ E M + PN +++
Sbjct: 610 TCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHD 647
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 128/307 (41%), Gaps = 49/307 (15%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI KA A+++ ++M C V++++ ++ + D+ LF+ L +
Sbjct: 225 LITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQ-LMERR 283
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFN--------------- 202
P++V++N +I ++ A L + M + G D+IT+N
Sbjct: 284 NCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEA 343
Query: 203 ---------------------TLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLD 241
TL G+ + GR ADA +I+ +V+ P++ +Y + +
Sbjct: 344 FQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLIL 403
Query: 242 GLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGM 298
+ + +ELV EM SK P V T A++ G + E A + ++ GC
Sbjct: 404 EYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTD 463
Query: 299 NKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQA--PLQLVVDRLAKEL----RVE 352
+ I+ L+V + + A + ++ +R D+ P VD L + L R +
Sbjct: 464 DALIYNLVVEGMARASKHNKALAVLEQVIDKR---DRKFNPSSSAVDALVESLCQVGRTD 520
Query: 353 EAKELVE 359
+AK+L+
Sbjct: 521 DAKQLLH 527
>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 85/371 (22%), Positives = 162/371 (43%), Gaps = 45/371 (12%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
+I G + + ++ + F + + G + IY + L + +F+ I + Y
Sbjct: 115 IINGYKRVGSAEQALKMFYRIGEFG-CKPTVRIYNHLLDALLSENKFQMINPL------Y 167
Query: 87 KDISKEGFTAR------LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNS 140
++ K+G L+ K + A K+F EM + C +++ ++ + +
Sbjct: 168 TNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKA 227
Query: 141 KKFDE------------------VDGLFKD----LPHKL-------GIEPDLVSYNTIIK 171
K D+ +DG+ K+ + KL G++P++VSY+ II
Sbjct: 228 GKIDDARELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIIN 287
Query: 172 AFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRP 231
+ G+++ A L +M +G ++ TF L+ G + G+ +A +W+ M+ P
Sbjct: 288 SLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEP 347
Query: 232 NVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY 291
NV +YN + GL ++AL++ +M+ P+V T+ LI GF G+L A +
Sbjct: 348 NVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETW 407
Query: 292 NK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKE 348
N+ GC N + +V +C+ D A +L ++ E C + + L
Sbjct: 408 NRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGN 467
Query: 349 LRVEEAKELVE 359
RVE A +L+E
Sbjct: 468 GRVEWAMKLLE 478
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 104/226 (46%), Gaps = 4/226 (1%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
E A +V D+M C V +++ L+ S + + G P++V+Y
Sbjct: 365 LEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISH-GCRPNVVTYT 423
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
++ D AN+L+ +M +G + +TFNT + G NGR A K+ E M
Sbjct: 424 CMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGH 483
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
PN+ +YN LD L + ++A L E+ ++ + P++ T+ ++ GF G + EA
Sbjct: 484 GCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEA 543
Query: 288 KRWYNKS---GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSER 330
+ + K+ G + + ++ C++G + A L +R S +
Sbjct: 544 LQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMK 589
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 101/199 (50%), Gaps = 4/199 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHK 156
++ + K +MF+ A + ++M C ++FN + G C N + + L + H
Sbjct: 425 MVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGH- 483
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
G P++ +YN ++ A + A L E+E + ++ +L+T+NT+L GF G +
Sbjct: 484 -GCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGE 542
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS-KEINPDVFTFYALI 275
A +++ + P+ +YN + + + K A +LV + S KE +PD+ T+ +LI
Sbjct: 543 ALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLI 602
Query: 276 KGFVNEGNLEEAKRWYNKS 294
G N N+EEA + +K+
Sbjct: 603 WGACNWMNIEEAMAFLDKA 621
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 117/259 (45%), Gaps = 28/259 (10%)
Query: 40 LVDKFKKSSDL------------GRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYK 87
L+D F KS DL R N YT V L F ++E
Sbjct: 390 LIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEK----- 444
Query: 88 DISKEGFTARLI-------ALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNS 140
++ EG T + L G + E A K+ + M G C + ++N LL A
Sbjct: 445 -MTLEGCTPNTMTFNTFIKGLCGNGRV-EWAMKLLERMQGHGCLPNITTYNELLDALFRM 502
Query: 141 KKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLIT 200
K++E GLF+++ + ++P+LV+YNT++ F G + A L + +G D IT
Sbjct: 503 NKYEEAFGLFQEIEAR-NLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSIT 561
Query: 201 FNTLLLGFYSNGRFADAEKIWETMVNM-NVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
+NT++ + G+ A ++ E + +M P++ +Y + + G ++A+ + +
Sbjct: 562 YNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKA 621
Query: 260 RSKEINPDVFTFYALIKGF 278
++ I P+ T+ AL++ F
Sbjct: 622 INQGICPNFATWNALVRCF 640
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 95/221 (42%), Gaps = 8/221 (3%)
Query: 141 KKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLIT 200
+ V G F + + + +Y +I+ + +D +L +M+ GI
Sbjct: 52 RNLSSVLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDL 111
Query: 201 FNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMR 260
F ++ G+ G A K++ + +P VR YN LD L E + + L M+
Sbjct: 112 FICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMK 171
Query: 261 SKEINPDVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLD 317
+ P+VFT+ L+K ++ A + + + GC + + +V +C+ G +D
Sbjct: 172 KDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKID 231
Query: 318 FAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
A L R F V A ++D + KE R+E A +L+
Sbjct: 232 DARELAGR-FKPSVPVYNA----LIDGMCKEGRIEVAIKLL 267
>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 85/371 (22%), Positives = 162/371 (43%), Gaps = 45/371 (12%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
+I G + + ++ + F + + G + IY + L + +F+ I + Y
Sbjct: 115 IINGYKRVGSAEQALKMFYRIGEFG-CKPTVRIYNHLLDALLSENKFQMINPL------Y 167
Query: 87 KDISKEGFTAR------LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNS 140
++ K+G L+ K + A K+F EM + C +++ ++ + +
Sbjct: 168 TNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKA 227
Query: 141 KKFDE------------------VDGLFKD----LPHKL-------GIEPDLVSYNTIIK 171
K D+ +DG+ K+ + KL G++P++VSY+ II
Sbjct: 228 GKIDDARELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIIN 287
Query: 172 AFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRP 231
+ G+++ A L +M +G ++ TF L+ G + G+ +A +W+ M+ P
Sbjct: 288 SLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEP 347
Query: 232 NVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY 291
NV +YN + GL ++AL++ +M+ P+V T+ LI GF G+L A +
Sbjct: 348 NVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETW 407
Query: 292 NK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKE 348
N+ GC N + +V +C+ D A +L ++ E C + + L
Sbjct: 408 NRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGN 467
Query: 349 LRVEEAKELVE 359
RVE A +L+E
Sbjct: 468 GRVEWAMKLLE 478
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 104/226 (46%), Gaps = 4/226 (1%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
E A +V D+M C V +++ L+ S + + G P++V+Y
Sbjct: 365 LEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISH-GCRPNVVTYT 423
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
++ D AN+L+ +M +G + ITFNT + G NGR A K+ E M
Sbjct: 424 CMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGH 483
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
PN+ +YN LD L + ++A L E+ ++ + P++ T+ ++ GF G + EA
Sbjct: 484 GCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEA 543
Query: 288 KRWYNKS---GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSER 330
+ + K+ G + + ++ C++G + A L +R S +
Sbjct: 544 LQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMK 589
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 101/199 (50%), Gaps = 4/199 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHK 156
++ + K +MF+ A + ++M C ++FN + G C N + + L + H
Sbjct: 425 MVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGH- 483
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
G P++ +YN ++ A + A L E+E + ++ +L+T+NT+L GF G +
Sbjct: 484 -GCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGE 542
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS-KEINPDVFTFYALI 275
A +++ + P+ +YN + + + K A +LV + S KE +PD+ T+ +LI
Sbjct: 543 ALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLI 602
Query: 276 KGFVNEGNLEEAKRWYNKS 294
G N N+EEA + +K+
Sbjct: 603 WGACNWMNIEEAMAFLDKA 621
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 117/259 (45%), Gaps = 28/259 (10%)
Query: 40 LVDKFKKSSDL------------GRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYK 87
L+D F KS DL R N YT V L F ++E
Sbjct: 390 LIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEK----- 444
Query: 88 DISKEGFTARLI-------ALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNS 140
++ EG T I L G + E A K+ + M G C + ++N LL A
Sbjct: 445 -MTLEGCTPNTITFNTFIKGLCGNGRV-EWAMKLLERMQGHGCLPNITTYNELLDALFRM 502
Query: 141 KKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLIT 200
K++E GLF+++ + ++P+LV+YNT++ F G + A L + +G D IT
Sbjct: 503 NKYEEAFGLFQEIEAR-NLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSIT 561
Query: 201 FNTLLLGFYSNGRFADAEKIWETMVNM-NVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
+NT++ + G+ A ++ E + +M P++ +Y + + G ++A+ + +
Sbjct: 562 YNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKA 621
Query: 260 RSKEINPDVFTFYALIKGF 278
++ I P+ T+ AL++ F
Sbjct: 622 INQGICPNFATWNALVRCF 640
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 95/221 (42%), Gaps = 8/221 (3%)
Query: 141 KKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLIT 200
+ V G F + + + +Y +I+ + +D +L +M+ GI
Sbjct: 52 RNLSSVLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDL 111
Query: 201 FNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMR 260
F ++ G+ G A K++ + +P VR YN LD L E + + L M+
Sbjct: 112 FICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMK 171
Query: 261 SKEINPDVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLD 317
+ P+VFT+ L+K ++ A + + + GC + + +V +C+ G +D
Sbjct: 172 KDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKID 231
Query: 318 FAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
A L R F V A ++D + KE R+E A +L+
Sbjct: 232 DARELAGR-FKPSVPVYNA----LIDGMCKEGRIEVAIKLL 267
>gi|297610680|ref|NP_001064892.2| Os10g0484900 [Oryza sativa Japonica Group]
gi|255679504|dbj|BAF26806.2| Os10g0484900 [Oryza sativa Japonica Group]
Length = 434
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 157/351 (44%), Gaps = 28/351 (7%)
Query: 27 VIRGIYKENNLKRLV-DKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
+RG + LV + D R + +++ RLA R R + +
Sbjct: 55 AVRGEADPARIHSLVATALSRPDDYPRLHGSRPLFSLAASRLA---RLRRPDLAASLLRA 111
Query: 86 YKD--ISKEGFTARLIALYGKAAMFENARKVF-DEMPGRNCEQTVLSFNALLGACVNSKK 142
D + G AR I+L+ ++A + F D P + +S +ALL A + +
Sbjct: 112 LLDSAPASPGLLARAISLFPGP---DDALRAFSDSAPAARSD---VSLSALLSALFRAGR 165
Query: 143 FDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKK---GIRLDLI 199
D+V G+ P S+N ++ A V L +A LL EM KK D++
Sbjct: 166 VDDVKSTLASAETSFGVAPGRASHNVLLHALVKNSELAAARKLLGEMAKKLKHRPAPDIV 225
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
++NT+L G+ + G EK+ + + + PNV +YN R+ A + +T K EL+ M
Sbjct: 226 SYNTVLAGYSAQGDEEGFEKLLKEISAKKLEPNVVTYNCRIQWFAKKGETFKGEELLDAM 285
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS------------GCGMNKAIFKLLV 307
SK++ P+ T+ AL++G+ EGN+ A R + + G + + +L
Sbjct: 286 ESKDVAPNYLTYNALVQGYCKEGNVGSAMRVFKRMKVMKRREGRSDLGVSAHSQTYVVLF 345
Query: 308 PFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
+ EK LD A +CK F+ + ++ +V+ L K + EAK++V
Sbjct: 346 RSLVEKERLDDALWICKSCFAMKAAPPFEAVKGLVEGLVKGGKSAEAKDVV 396
>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 747
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 128/266 (48%), Gaps = 4/266 (1%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I+G KE N + + + G + YT + + A E L+ +
Sbjct: 315 TLIKGYCKEGNFHQALVMHAEMLRHG-LTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRV 373
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFD 144
E L+ + + A +V EM +V+++NAL+ G CV K D
Sbjct: 374 RGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMED 433
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
+ + +D+ K G+ PD+VSY+T++ F +D A + EM +KGI+ D IT+++L
Sbjct: 434 AI-AVLEDMKEK-GLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSL 491
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+ GF R +A ++E M+ + + P+ +Y A ++ +E +KAL+L EM K +
Sbjct: 492 IQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGV 551
Query: 265 NPDVFTFYALIKGFVNEGNLEEAKRW 290
PDV T+ LI G + EAKR
Sbjct: 552 LPDVVTYSVLINGLNKQSRTREAKRL 577
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 139/280 (49%), Gaps = 15/280 (5%)
Query: 99 IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKK-FDEVDGLFKDLPHKL 157
++L KA + + MPG VLS+NA+L A + SK+ + +FK++
Sbjct: 147 LSLIDKALSIVHLAQAHGFMPG------VLSYNAVLDATIRSKRNISFAENVFKEMLES- 199
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
+ P++ +YN +I+ F G++D A TL +ME KG +++T+NTL+ G+ + D
Sbjct: 200 QVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDG 259
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
K+ +M + PN+ SYN ++GL E + K+ ++ EM + + D T+ LIKG
Sbjct: 260 FKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKG 319
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
+ EGN +A + + G + + L+ +C+ G+++ A + +
Sbjct: 320 YCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPN 379
Query: 335 QAPLQLVVDRLAKELRVEEA----KELVELGKTNSYCRYN 370
+ +VD +++ + EA +E+ + G + S YN
Sbjct: 380 ERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYN 419
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 133/293 (45%), Gaps = 36/293 (12%)
Query: 37 LKRLVDKFK--KSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGF 94
L+++ D FK +S L N Y + L R + + +L + E
Sbjct: 253 LRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVT 312
Query: 95 TARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-------------------- 134
LI Y K F A + EM +V+++ +L+
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMR 372
Query: 135 --GACVNSKKFDE-VDGL----FKDLPHKL-------GIEPDLVSYNTIIKAFVDKGSLD 180
G C N + + VDG + + +++ G P +V+YN +I G ++
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKME 432
Query: 181 SANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARL 240
A +L +M++KG+ D+++++T+L GF + +A ++ MV ++P+ +Y++ +
Sbjct: 433 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLI 492
Query: 241 DGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK 293
G +++TK+A +L EM + PD FT+ ALI + EG+LE+A + +N+
Sbjct: 493 QGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNE 545
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 159/361 (44%), Gaps = 40/361 (11%)
Query: 26 SVIRGIYKENNLKR---LVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEH 82
S+I + K N+ R +D+ + RT T + G Q+ + +R + E+
Sbjct: 350 SLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREM--- 406
Query: 83 QKQYKDISKEGFTARLIAL------YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGA 136
+ GF+ ++ + E+A V ++M + V+S++ +L
Sbjct: 407 -------NDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSG 459
Query: 137 CVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRL 196
S DE + +++ K GI+PD ++Y+++I+ F ++ A L EM + G+
Sbjct: 460 FCRSYDVDEALRVKREMVEK-GIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPP 518
Query: 197 DLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELV 256
D T+ L+ + G A ++ MV V P+V +Y+ ++GL + +T++A L+
Sbjct: 519 DEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLL 578
Query: 257 GEMRSKEINPDVFTFY---------------ALIKGFVNEGNLEEAKRWYNKSGCGMNK- 300
++ +E P T++ +LIKGF +G + EA + + +S G N
Sbjct: 579 LKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVF-ESMLGKNHK 637
Query: 301 ---AIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
+ +++ C GD+ A+ L K L+ + +V L KE +V E +
Sbjct: 638 PDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSV 697
Query: 358 V 358
+
Sbjct: 698 I 698
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 118/266 (44%), Gaps = 6/266 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI Y K ++ K+ M + E ++S+N ++ + EV + ++ +
Sbjct: 246 LIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRR- 304
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G D V+YNT+IK + +G+ A + EM + G+ +IT+ +L+ G A
Sbjct: 305 GYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRA 364
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ + M + PN R+Y +DG + + +A ++ EM +P V T+ ALI G
Sbjct: 365 MEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALING 424
Query: 278 FVNEGNLEEAKRW---YNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCL-V 333
G +E+A + G + + ++ C D+D A + KR E+ +
Sbjct: 425 HCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRV-KREMVEKGIKP 483
Query: 334 DQAPLQLVVDRLAKELRVEEAKELVE 359
D ++ ++ R +EA +L E
Sbjct: 484 DTITYSSLIQGFCEQRRTKEACDLYE 509
>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Brachypodium distachyon]
Length = 554
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 131/269 (48%), Gaps = 9/269 (3%)
Query: 110 NARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTI 169
+ARKVFDEM R+ + TV++FN L+ ++ D VDGL+K++ +G++PD+ +Y +
Sbjct: 204 SARKVFDEM-RRSVQPTVVTFNTLISGMCRARDLDAVDGLYKEM-SDVGVKPDVYTYGAL 261
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
IK F G +++A + EM G+ + + F TL+ G +++ M V
Sbjct: 262 IKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGV 321
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA-- 287
P++ +YNA ++GL + K A +V EM++ + PD T+ LI G +G L+ A
Sbjct: 322 MPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMD 381
Query: 288 -KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLA 346
K+ + +++ + L+ + + G A + + D +V+D
Sbjct: 382 IKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFC 441
Query: 347 KELRVEEA----KELVELGKTNSYCRYNL 371
++ V+ KE+ GK YN+
Sbjct: 442 RKGDVKTGFKLLKEMQNKGKKPGVVTYNV 470
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 111/229 (48%), Gaps = 13/229 (5%)
Query: 134 LGACVNSKK-FDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKK 192
LG V+++K FDE+ + ++P +V++NT+I LD+ + L EM
Sbjct: 199 LGELVSARKVFDEM---------RRSVQPTVVTFNTLISGMCRARDLDAVDGLYKEMSDV 249
Query: 193 GIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKA 252
G++ D+ T+ L+ GF GR +A K++ M + V PN + +D E
Sbjct: 250 GVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAG 309
Query: 253 LELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPF 309
++L +MR + + PD+ + AL+ G NL+ A+ + +G +K + L+
Sbjct: 310 MDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDG 369
Query: 310 VCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
C+ G LD A ++ ++ + +D+ ++ L+K R +A+ ++
Sbjct: 370 CCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVL 418
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/292 (20%), Positives = 126/292 (43%), Gaps = 5/292 (1%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I G+ + +L + +K+ SD+G + + Y ++ R ++ +
Sbjct: 225 TLISGMCRARDLDAVDGLYKEMSDVG-VKPDVYTYGALIKGFCRTGRMENAVKMFNEMRD 283
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
LI + K ++ +M R ++++NAL+ ++
Sbjct: 284 TGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKA 343
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
+ + +++ + G++PD V+Y T+I G LD A + +M +K + LD +T+ L+
Sbjct: 344 AESIVEEMKNA-GLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALI 402
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEIN 265
G GR DAE++ M+ + P+ +Y +D + K +L+ EM++K
Sbjct: 403 SGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKK 462
Query: 266 PDVFTFYALIKGFVNEGNLEEAKRWYNKS---GCGMNKAIFKLLVPFVCEKG 314
P V T+ ++ G G ++ A + G + + +L+ C+ G
Sbjct: 463 PGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHG 514
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 106/234 (45%), Gaps = 7/234 (2%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMP 119
Y V L A+ + E I+E K + LI K + A + +M
Sbjct: 328 YNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMA 387
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL 179
+ +++ AL+ + + + + + +++ + +EPD +Y +I AF KG +
Sbjct: 388 EKEVSLDEVTYTALISGLSKAGRPVDAERVLREM-MEAALEPDNTTYTMVIDAFCRKGDV 446
Query: 180 DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNAR 239
+ LL EM+ KG + ++T+N ++ G G+ +A+ + M+N+ V P+ +YN
Sbjct: 447 KTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNIL 506
Query: 240 LDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK 293
LDG + + EL SK + PD + +LI + + AK ++++
Sbjct: 507 LDGQCKHGKVANSEELES---SKGMVPDFAVYTSLISELAKK---KPAKNYHDR 554
>gi|255572834|ref|XP_002527349.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533268|gb|EEF35021.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 443
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 141/296 (47%), Gaps = 7/296 (2%)
Query: 66 RLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQ 125
++ ++ I EI+E D+ LI+ + +A K+ +M R C
Sbjct: 131 KIGKTRKATRIMEIIEDSGAVPDVITYNV---LISGMCSTGRWMDAEKLLADMVRRGCSP 187
Query: 126 TVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTL 185
+V++FN L+ + + +P K G P+ +SYN ++ F + ++ A
Sbjct: 188 SVVTFNILINFLCRKGLLGRAIDVLEKMP-KHGCTPNSLSYNPLLHGFCKEKKMERAIEY 246
Query: 186 LYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAI 245
L +M +G D++T+NTLL +G+ A ++ + + P + +YN +DGL+
Sbjct: 247 LGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSK 306
Query: 246 EKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAI 302
+T +A +L+ EMR+K + PD+ T+ +L+ G EG ++EA ++++ G N
Sbjct: 307 VGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAIT 366
Query: 303 FKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
+ ++ +C+ D A + C +A ++++ LA E +EA EL+
Sbjct: 367 YNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEALELL 422
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 98/196 (50%), Gaps = 1/196 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+ + K E A + +M R C ++++N LL A K D L L K
Sbjct: 230 LLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSK- 288
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G P L++YNT+I G D A LL EM KG++ D+IT+++L+ G G+ +A
Sbjct: 289 GCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEA 348
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
K + + + V+PN +YNA + GL ++T +A++ + M + P ++ LI+G
Sbjct: 349 IKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTILIEG 408
Query: 278 FVNEGNLEEAKRWYNK 293
EG +EA N+
Sbjct: 409 LAYEGLAKEALELLNE 424
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 100/202 (49%), Gaps = 3/202 (1%)
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
PD++ ++I+ F G A ++ +E G D+IT+N L+ G S GR+ DAEK+
Sbjct: 117 PDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVITYNVLISGMCSTGRWMDAEKL 176
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
MV P+V ++N ++ L + +A++++ +M P+ ++ L+ GF
Sbjct: 177 LADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCK 236
Query: 281 EGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAP 337
E +E A + K GC + + L+ +C+ G +D A L + S+ C
Sbjct: 237 EKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLIT 296
Query: 338 LQLVVDRLAKELRVEEAKELVE 359
V+D L+K + ++A +L++
Sbjct: 297 YNTVIDGLSKVGKTDQAAKLLD 318
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 83/162 (51%), Gaps = 1/162 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+ K + A ++ +++ + C ++++N ++ K D+ L ++ K
Sbjct: 265 LLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAK- 323
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD+++Y++++ +G +D A +++E G++ + IT+N ++LG + A
Sbjct: 324 GLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRA 383
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
MV +P SY ++GLA E K+ALEL+ E+
Sbjct: 384 IDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEALELLNEL 425
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 84/198 (42%), Gaps = 3/198 (1%)
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
+ N + V G L+ L M +G D+I +L+ GF G+ A +I E
Sbjct: 85 IESNNNLSKLVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEI 144
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
+ + P+V +YN + G+ + A +L+ +M + +P V TF LI +G
Sbjct: 145 IEDSGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGL 204
Query: 284 LEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL 340
L A K GC N + L+ C++ ++ A + S C D
Sbjct: 205 LGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNT 264
Query: 341 VVDRLAKELRVEEAKELV 358
++ L K+ +V+ A EL+
Sbjct: 265 LLTALCKDGKVDAAVELL 282
>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 124/244 (50%), Gaps = 7/244 (2%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A+KVF+EM + + V+++N+L+ ++ K DE GL +D +G++P++V+YN +I
Sbjct: 318 AKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGL-QDKMSGMGLKPNVVTYNALI 376
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
F K L A +L ++ K+G+ ++ITFNTL+ + GR DA + M++ V
Sbjct: 377 NGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVC 436
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
PNV +YN + G E K+A +L EM + D+ T+ L+ +G +A R
Sbjct: 437 PNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRL 496
Query: 291 YN------KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDR 344
+ K G N + +L+ C KG L+ A L + + ++ ++ D
Sbjct: 497 LDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDE 556
Query: 345 LAKE 348
+ ++
Sbjct: 557 MMEK 560
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 122/249 (48%), Gaps = 4/249 (1%)
Query: 114 VFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAF 173
V+ EM R V++F+ ++ KF + + +D+ G P +++YNTII +
Sbjct: 216 VYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDM-KAWGFSPSVITYNTIIDGY 274
Query: 174 VDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNV 233
G + A+ LL EM K I + ITFN L+ GF + A+K++E M ++PNV
Sbjct: 275 CKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNV 334
Query: 234 RSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN- 292
+YN+ ++GL + +AL L +M + P+V T+ ALI GF + L+EA+ +
Sbjct: 335 VTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDD 394
Query: 293 --KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELR 350
K G N F L+ + G +D AF L + + ++ +E
Sbjct: 395 IGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGN 454
Query: 351 VEEAKELVE 359
V+EA++L +
Sbjct: 455 VKEARKLAK 463
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 135/310 (43%), Gaps = 26/310 (8%)
Query: 73 FRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMP--GRNCEQTVLSF 130
F+W QK++ I RL+ L A + R + D T+
Sbjct: 94 FKWT------QKEFGAIHNVEQFCRLLHLLANAKNYNKIRALLDSFAKNAHYSNSTIFHS 147
Query: 131 NALLGA--CVNSKKFD----------EVDGLFK--DLPHKLGIEPDLVSYNTIIKAFVDK 176
++LG+ C NS D E+D + D G +S N ++ + V +
Sbjct: 148 LSVLGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKE 207
Query: 177 GSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSY 236
G + ++ EM ++ I ++++TF+ ++ G G+F A + E M P+V +Y
Sbjct: 208 GRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITY 267
Query: 237 NARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY---NK 293
N +DG + KA L+ EM +K I+P+ TF LI GF + N+ AK+ + +
Sbjct: 268 NTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQR 327
Query: 294 SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEE 353
G N + L+ +C G LD A L + + +++ K+ ++E
Sbjct: 328 QGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKE 387
Query: 354 AKELV-ELGK 362
A+E++ ++GK
Sbjct: 388 AREMLDDIGK 397
>gi|255660884|gb|ACU25611.1| pentatricopeptide repeat-containing protein [Verbena litoralis]
Length = 484
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 130/285 (45%), Gaps = 34/285 (11%)
Query: 73 FRWIEE--ILEHQKQYK---------------------DISKEGFT------ARLIALYG 103
FRW+E + EH ++ D+ K+G +I YG
Sbjct: 32 FRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYG 91
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K + + + K+F +M E+T+ S+NAL + ++ F + + GIEP
Sbjct: 92 KEXIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSE-GIEPTR 150
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
++N +I F G +++AN +M+ + I D++T+NT++ G+Y + +AEK +
Sbjct: 151 HTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVE 210
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M N+ P V +Y + G Q AL LV EM+ I P+ T+ L+ G N
Sbjct: 211 MKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEX 270
Query: 284 LEEA----KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCK 324
+ EA K +K + +IF L+ C+ G+LD A ++ K
Sbjct: 271 MSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLK 315
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 99/234 (42%), Gaps = 46/234 (19%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I Y + E A K F EM GRN E TV+++ L+ V+ + D+ L +++
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEM-KGF 249
Query: 158 GIEPDLVSYNT----------------IIKAFVDK--------------------GSLDS 181
GI+P+ ++Y+T I+K +DK G+LD+
Sbjct: 250 GIKPNAITYSTLLPGLCNAEXMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDA 309
Query: 182 ANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV--RPNV------ 233
A +L M + + + + L+ F G++ A K+ + ++ ++ RP
Sbjct: 310 AADVLKAMIRLSVPTEAGHYGXLIENFCKXGQYDKAVKLLDKLIEKDIILRPQSTLHLEP 369
Query: 234 RSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+YN ++ L Q KA LV ++ + D LI+G EG+ + A
Sbjct: 370 SAYNPMIEYLCNNGQAXKAETLVRQLXKLGVQ-DPTALNTLIRGHSQEGSPDSA 422
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 41/215 (19%), Positives = 93/215 (43%), Gaps = 17/215 (7%)
Query: 37 LKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTA 96
LK ++DK+ +D I+ + + ++L+ + ++ G
Sbjct: 278 LKEMMDKYLAPTD-------NSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYG 330
Query: 97 RLIALYGKAAMFENARKVFDEM--------PGRNCEQTVLSFNALLGACVNSKKFDEVDG 148
LI + K ++ A K+ D++ P ++N ++ N+ + + +
Sbjct: 331 XLIENFCKXGQYDKAVKLLDKLIEKDIILRPQSTLHLEPSAYNPMIEYLCNNGQAXKAET 390
Query: 149 LFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
L + L KLG++ D + NT+I+ +GS DSA LL M ++ + + +N+L+ +
Sbjct: 391 LVRQL-XKLGVQ-DPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYNSLVQSY 448
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
DA+ ++M+ + P+ + + ++ L
Sbjct: 449 LKKNEPXDAKAALDSMIENDHLPDSALFRSVMESL 483
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 97/250 (38%), Gaps = 17/250 (6%)
Query: 39 RLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEIL-EHQKQYKDISKEGFTAR 97
RLV++ K + N Y+ + L NA+ IL E +Y + R
Sbjct: 241 RLVEEMKGFG----IKPNAITYSTLLPGLCNAEXMSEARVILKEMMDKYLAPTDNSIFMR 296
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHK- 156
LI+ + K+ + A V M + + L+ ++D+ L L K
Sbjct: 297 LISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGXLIENFCKXGQYDKAVKLLDKLIEKD 356
Query: 157 --------LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
L +EP +YN +I+ + G A TL+ ++ K G++ D NTL+ G
Sbjct: 357 IILRPQSTLHLEPS--AYNPMIEYLCNNGQAXKAETLVRQLXKLGVQ-DPTALNTLIRGH 413
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDV 268
G A ++ + M+ V +YN+ + + + A + M + PD
Sbjct: 414 SQEGSPDSAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPXDAKAALDSMIENDHLPDS 473
Query: 269 FTFYALIKGF 278
F ++++
Sbjct: 474 ALFRSVMESL 483
>gi|255660874|gb|ACU25606.1| pentatricopeptide repeat-containing protein [Verbena canescens]
Length = 484
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 144/320 (45%), Gaps = 34/320 (10%)
Query: 73 FRWIEE--ILEHQKQYK---------------------DISKEGFT------ARLIALYG 103
FRW+E + EH ++ D+ K+G +I YG
Sbjct: 32 FRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYG 91
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K + + + K+F +M E+T+ S+NAL + ++ F + + GIEP
Sbjct: 92 KEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSE-GIEPTR 150
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
++N +I F G +++AN +M+ + I D++T+NT++ G+Y + +AEK +
Sbjct: 151 HTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVE 210
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M N+ P V +Y + G Q AL LV EM+ I P+ T+ L+ G N
Sbjct: 211 MKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEK 270
Query: 284 LEEA----KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQ 339
+ EA K +K + +IF L+ C+ G+LD A ++ K +
Sbjct: 271 MSEARVILKEMMDKYLAPTDNSIFLRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYG 330
Query: 340 LVVDRLAKELRVEEAKELVE 359
++++ K + ++A +L++
Sbjct: 331 ILIENFCKAGQYDKAVKLLD 350
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 99/234 (42%), Gaps = 46/234 (19%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I Y + E A K F EM GRN E TV+++ L+ V+ + D+ L +++
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMK-GF 249
Query: 158 GIEPDLVSYNT----------------IIKAFVDK--------------------GSLDS 181
GI+P+ ++Y+T I+K +DK G+LD+
Sbjct: 250 GIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFLRLISSHCKSGNLDA 309
Query: 182 ANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV--RPNV------ 233
A +L M + + + + L+ F G++ A K+ + ++ ++ RP
Sbjct: 310 AADVLKAMIRLSVPTEAGHYGILIENFCKAGQYDKAVKLLDKLIEKDIILRPQSTLHLEP 369
Query: 234 RSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+YN ++ L Q KA LV ++ + D LI+G EG+ + A
Sbjct: 370 SAYNLMIEYLCNNGQASKAETLVRQLMKLGVQ-DPTALNTLIRGHSQEGSPDSA 422
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 42/215 (19%), Positives = 94/215 (43%), Gaps = 17/215 (7%)
Query: 37 LKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTA 96
LK ++DK+ +D I+ + + ++L+ + ++ G
Sbjct: 278 LKEMMDKYLAPTD-------NSIFLRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYG 330
Query: 97 RLIALYGKAAMFENARKVFDEM--------PGRNCEQTVLSFNALLGACVNSKKFDEVDG 148
LI + KA ++ A K+ D++ P ++N ++ N+ + + +
Sbjct: 331 ILIENFCKAGQYDKAVKLLDKLIEKDIILRPQSTLHLEPSAYNLMIEYLCNNGQASKAET 390
Query: 149 LFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
L + L KLG++ D + NT+I+ +GS DSA LL M ++ + + +N+L+ +
Sbjct: 391 LVRQL-MKLGVQ-DPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYNSLVQSY 448
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
DA+ ++M+ + P+ + + ++ L
Sbjct: 449 LKKNEPXDAKAALDSMIENDHLPDSALFRSVMESL 483
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 99/250 (39%), Gaps = 17/250 (6%)
Query: 39 RLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEIL-EHQKQYKDISKEGFTAR 97
RLV++ K + N Y+ + L NA++ IL E +Y + R
Sbjct: 241 RLVEEMKGFG----IKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFLR 296
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHK- 156
LI+ + K+ + A V M + + L+ + ++D+ L L K
Sbjct: 297 LISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGILIENFCKAGQYDKAVKLLDKLIEKD 356
Query: 157 --------LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
L +EP +YN +I+ + G A TL+ ++ K G++ D NTL+ G
Sbjct: 357 IILRPQSTLHLEPS--AYNLMIEYLCNNGQASKAETLVRQLMKLGVQ-DPTALNTLIRGH 413
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDV 268
G A ++ + M+ V +YN+ + + + A + M + PD
Sbjct: 414 SQEGSPDSAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPXDAKAALDSMIENDHLPDS 473
Query: 269 FTFYALIKGF 278
F ++++
Sbjct: 474 ALFRSVMESL 483
>gi|255660896|gb|ACU25617.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
Length = 484
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 129/285 (45%), Gaps = 34/285 (11%)
Query: 73 FRWIEE--ILEHQKQYK---------------------DISKEGFT------ARLIALYG 103
FRW+E + EH ++ D+ K+G +I YG
Sbjct: 32 FRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYG 91
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K + + + K+F +M E+T+ S+NAL + ++ F + + GIEP
Sbjct: 92 KEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSE-GIEPTR 150
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
++N +I F G +++AN +M+ + I D++T+NT++ G+Y + +AEK +
Sbjct: 151 HTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVE 210
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M N+ P V +Y + G Q AL LV EM+ I P+ T+ L+ G N
Sbjct: 211 MKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEK 270
Query: 284 LEEA----KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCK 324
+ EA K +K + IF L+ C+ G+LD A ++ K
Sbjct: 271 MSEARVILKEMMDKYLAPTDNXIFMRLISSHCKSGNLDAAADVLK 315
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 99/234 (42%), Gaps = 46/234 (19%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I Y + E A K F EM GRN E TV+++ L+ V+ + D+ L +++
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMK-GF 249
Query: 158 GIEPDLVSYNT----------------IIKAFVDK--------------------GSLDS 181
GI+P+ ++Y+T I+K +DK G+LD+
Sbjct: 250 GIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNXIFMRLISSHCKSGNLDA 309
Query: 182 ANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV--RPNV------ 233
A +L M + + + + L+ F G++ A K+ + ++ ++ RP
Sbjct: 310 AADVLKAMIRLSVPTEAGHYGVLIENFCKXGQYDKAVKLLDKLIEKDIILRPQSTLHLEP 369
Query: 234 RSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+YN ++ L Q KA LV ++ + D LI+G EG+ + A
Sbjct: 370 SAYNPMIEYLCNNGQAXKAETLVRQLXKLGVQ-DPTALNTLIRGHSQEGSPDSA 422
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 75/162 (46%), Gaps = 10/162 (6%)
Query: 90 SKEGFTARLIALYGKAAMFENARKVFDEM--------PGRNCEQTVLSFNALLGACVNSK 141
++ G LI + K ++ A K+ D++ P ++N ++ N+
Sbjct: 324 TEAGHYGVLIENFCKXGQYDKAVKLLDKLIEKDIILRPQSTLHLEPSAYNPMIEYLCNNG 383
Query: 142 KFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITF 201
+ + + L + L KLG++ D + NT+I+ +GS DSA LL M ++ + + +
Sbjct: 384 QAXKAETLVRQL-XKLGVQ-DPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAY 441
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
N+L+ + DA+ ++M+ + P+ + + ++ L
Sbjct: 442 NSLVQSYLKKNEPXDAKAALDSMIENDHLPDSALFRSVMESL 483
Score = 41.6 bits (96), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 98/250 (39%), Gaps = 17/250 (6%)
Query: 39 RLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEIL-EHQKQYKDISKEGFTAR 97
RLV++ K + N Y+ + L NA++ IL E +Y + R
Sbjct: 241 RLVEEMKGFG----IKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNXIFMR 296
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHK- 156
LI+ + K+ + A V M + + L+ ++D+ L L K
Sbjct: 297 LISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGVLIENFCKXGQYDKAVKLLDKLIEKD 356
Query: 157 --------LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
L +EP +YN +I+ + G A TL+ ++ K G++ D NTL+ G
Sbjct: 357 IILRPQSTLHLEPS--AYNPMIEYLCNNGQAXKAETLVRQLXKLGVQ-DPTALNTLIRGH 413
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDV 268
G A ++ + M+ V +YN+ + + + A + M + PD
Sbjct: 414 SQEGSPDSAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPXDAKAALDSMIENDHLPDS 473
Query: 269 FTFYALIKGF 278
F ++++
Sbjct: 474 ALFRSVMESL 483
>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
Length = 915
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 151/334 (45%), Gaps = 17/334 (5%)
Query: 24 IGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQ 83
+ S++ G+ ++ + D + +G + +Y + L +F E +
Sbjct: 334 LSSLVEGLRRKGKVVDAFDLVNRVKKVGAM-PSLFVYNALINSLCKDGKFD------EAE 386
Query: 84 KQYKDISKEGFTAR------LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGAC 137
+K++ ++G A LI + + + A +M + TV +N+L+
Sbjct: 387 LLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGH 446
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLD 197
F ++ K G++P +VSY ++I + +KG L A L +EM KGI +
Sbjct: 447 CKLGNLSAAVSFFDEMIDK-GLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPN 505
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
TF TL+ + R DA ++++ M+ N+ PN +YN ++G E T KA EL+
Sbjct: 506 TYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLN 565
Query: 258 EMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW---YNKSGCGMNKAIFKLLVPFVCEKG 314
+M K + PD +T+ LI + G + EAK++ ++ +N+ + L+ C++G
Sbjct: 566 QMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEG 625
Query: 315 DLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKE 348
L A +C+ +D +++D KE
Sbjct: 626 RLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKE 659
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 146/337 (43%), Gaps = 9/337 (2%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
S+I G K NL V F + D G + YT + N + L H+
Sbjct: 441 SLINGHCKLGNLSAAVSFFDEMIDKG-LKPTVVSYTSLISGYCNKGKLHEAFR-LYHEMT 498
Query: 86 YKDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKF 143
K I+ +T LI+ +A +A ++FDEM +N +++N ++ G C
Sbjct: 499 GKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTV 558
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT 203
+ L + K G+ PD +Y +I + G + A + ++ ++ +L+ + ++
Sbjct: 559 KAFE-LLNQMVQK-GLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSA 616
Query: 204 LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
LL G+ GR DA + MV V ++ Y +DG E+ T L+ M +
Sbjct: 617 LLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQR 676
Query: 264 INPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAF 320
+ PD + ++I G+ G++++A ++ GC N + L+ +C+ G +D A
Sbjct: 677 LRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAE 736
Query: 321 NLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
L K + +D LA+E +E+A +L
Sbjct: 737 LLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQL 773
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 110/254 (43%), Gaps = 9/254 (3%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTV---QRLANAKRFRWIEEILEHQ 83
+I G KE + + K D R R + IYT + + + K+ I +I+ +
Sbjct: 652 LIDGTIKEQDTSAVFGLLKNMHD-QRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDE 710
Query: 84 KQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKF 143
+I LI KA + + A ++ EM N +++ L
Sbjct: 711 GCTPNIVT---YTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSM 767
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT 203
++ L D+ G+ + VSYN +++ F G ++ A LL EM I D IT++T
Sbjct: 768 EKAVQLHNDMLK--GLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYST 825
Query: 204 LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
++ G A + W+TM+N ++P+ +YN + G I + KA EL +M +
Sbjct: 826 IIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRG 885
Query: 264 INPDVFTFYALIKG 277
+ P+ T +L G
Sbjct: 886 VKPNQATHKSLSHG 899
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/303 (20%), Positives = 133/303 (43%), Gaps = 12/303 (3%)
Query: 26 SVIRGIYKENNLK---RLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEH 82
++I +++ N + RL D+ + + + T + G + K F + ++++
Sbjct: 511 TLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQ- 569
Query: 83 QKQYKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSK 141
K + + +T R LI+ A+K D++ + + + ++ALL
Sbjct: 570 ----KGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEG 625
Query: 142 KFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITF 201
+ + G+ +++ K G++ DLV Y +I + + + LL M + +R D + +
Sbjct: 626 RLRDALGVCREMV-KRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIY 684
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS 261
+++ G+ G A IW+ M++ PN+ +Y ++ L KA L EM
Sbjct: 685 TSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLV 744
Query: 262 KEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGM--NKAIFKLLVPFVCEKGDLDFA 319
P+ T+ + EG++E+A + +N G+ N + +LV C+ G ++ A
Sbjct: 745 SNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLKGLLANTVSYNILVRGFCKLGRVEEA 804
Query: 320 FNL 322
L
Sbjct: 805 TKL 807
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 123/294 (41%), Gaps = 44/294 (14%)
Query: 66 RLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQ 125
R+ AK+F I+++ H++ +K +++ ++A L+ Y K +A V EM R +
Sbjct: 591 RVCEAKKF--IDDL--HREHFK-LNEMCYSA-LLHGYCKEGRLRDALGVCREMVKRGVDM 644
Query: 126 TVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTL 185
++ + L+ + + V GL K++ H + PD V Y ++I + GS+ A +
Sbjct: 645 DLVCYAVLIDGTIKEQDTSAVFGLLKNM-HDQRLRPDKVIYTSMIDGYSKAGSVKKAFGI 703
Query: 186 LYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPN------------- 232
M +G +++T+ TL+ G AE +W+ M+ N PN
Sbjct: 704 WDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAR 763
Query: 233 ---------------------VRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTF 271
SYN + G + ++A +L+ EM I PD T+
Sbjct: 764 EGSMEKAVQLHNDMLKGLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITY 823
Query: 272 YALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
+I GNL+ A +++ G + + L+ C G+L AF L
Sbjct: 824 STIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFEL 877
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/302 (19%), Positives = 135/302 (44%), Gaps = 7/302 (2%)
Query: 24 IGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQ 83
+G V+ G+ K + ++ F + +G R + IY ++ K F +E+++ +
Sbjct: 196 LGEVLNGLAKIRRVDMVLVLFGEILSMG-IRPDIYIYVAVIRSFCELKNFAKAKEMIQ-R 253
Query: 84 KQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKF 143
+ D++ + + L ++E A ++ + + + + +++ L+ ++F
Sbjct: 254 MESSDLNVVVYNVLIHGLCKNKRVWE-AVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEF 312
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT 203
+ G+ ++ +LG P + +++++ KG + A L+ ++K G L +N
Sbjct: 313 EVGAGVMDEMI-ELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNA 371
Query: 204 LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
L+ +G+F +AE +++ M + N +Y+ +D + A+ +G+M
Sbjct: 372 LINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAG 431
Query: 264 INPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAF 320
I V+ + +LI G GNL A ++++ G + L+ C KG L AF
Sbjct: 432 IKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAF 491
Query: 321 NL 322
L
Sbjct: 492 RL 493
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 86/193 (44%), Gaps = 19/193 (9%)
Query: 121 RNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLD 180
+N + +SF L+ A VN+ F L + L + G++P V + ++ F +K
Sbjct: 99 KNFNHSTMSFCILIHALVNANLFWPASSLLQTLLLRGGLDPREV-FEALLDCF-EKCDFI 156
Query: 181 SANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARL 240
S+ + F+ L+ + R D+ I+ M + P VR+ L
Sbjct: 157 SS----------------LGFDLLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVL 200
Query: 241 DGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK-SGCGMN 299
+GLA ++ L L GE+ S I PD++ + A+I+ F N +AK + +N
Sbjct: 201 NGLAKIRRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSDLN 260
Query: 300 KAIFKLLVPFVCE 312
++ +L+ +C+
Sbjct: 261 VVVYNVLIHGLCK 273
>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
Length = 892
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 120/236 (50%), Gaps = 4/236 (1%)
Query: 127 VLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLL 186
+ + NAL+ ++F E + LF+ + ++ G+EP+ V+Y +I + +G +D A +
Sbjct: 335 LFACNALIDKLCKDRRFREAERLFRGMANR-GLEPNEVTYAILIHSLCKRGMMDDALCMF 393
Query: 187 YEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIE 246
M +KGIR+ + +N+L+ G+ + F A + MV + P+ SY+ + GL +
Sbjct: 394 DRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRK 453
Query: 247 KQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIF 303
A+EL EM ++ +V+TF LI GF +GN++EA R ++K S N+ F
Sbjct: 454 GDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTF 513
Query: 304 KLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+++ C G++ AF L + D + ++ L L +AKE V+
Sbjct: 514 NVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVD 569
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 131/312 (41%), Gaps = 41/312 (13%)
Query: 22 KFIGSVIRGIYKENNLKR--LVDK-FKKSSDLGRFRTNTGIYT--GTVQRLANAKRFRWI 76
F+ SV + + L++ +DK F+ + LG ++ + +L +RFR
Sbjct: 295 HFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREA 354
Query: 77 EEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGA 136
E + E A LI K M ++A +FD M + TV +N+L+
Sbjct: 355 ERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLING 414
Query: 137 CVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRL 196
F + GL ++ K G+ P SY+ +I KG L SA L EM + G+
Sbjct: 415 YCQHDNFHQARGLLNEMVEK-GLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSG 473
Query: 197 DLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELV 256
++ TF TL+ GF +G +A ++++ M++ +V PN ++N ++G +KA +L
Sbjct: 474 NVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLY 533
Query: 257 GEMRSKEINPDVFTFYALIK-----------------------------------GFVNE 281
+M + + PD +T+ +LI GF E
Sbjct: 534 DQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKE 593
Query: 282 GNLEEAKRWYNK 293
G L E +++
Sbjct: 594 GRLTETYHIWDE 605
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 146/340 (42%), Gaps = 16/340 (4%)
Query: 26 SVIRGIYKENNL---KRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKR-FRWIEEILE 81
++I G K+ N+ RL DK SS + T + G R+ N ++ F+ +++++
Sbjct: 480 TLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYC-RVGNVRKAFQLYDQMVD 538
Query: 82 HQKQYKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNS 140
+ ++ + +T R LI++ A++ D++ S L+
Sbjct: 539 -----RGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKE 593
Query: 141 KKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLIT 200
+ E ++ ++ + G++ DL+S+ I+ A + + + L EM++KG++ D +
Sbjct: 594 GRLTETYHIWDEMRAR-GVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNV- 651
Query: 201 FNTLLLGFYSNGR-FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
F+T ++ +S A W+ M+ PNV +Y ++ L A L EM
Sbjct: 652 FHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEM 711
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK--SGCGMNKAIFKLLVPFVCEKGDLD 317
P+ FT+ + NEG LE+AK + GC N F L+ C+ G +
Sbjct: 712 LVGRFLPNSFTYNCFLDFLANEGELEKAKVLHATILEGCLANTVTFNTLIKGFCKAGQIQ 771
Query: 318 FAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
A +L + D +++ L K + +A +L
Sbjct: 772 GAIDLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQL 811
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 131/323 (40%), Gaps = 47/323 (14%)
Query: 45 KKSSDLGRFRTNTGI----YTGT--VQRLANAKRFRWIEEILEHQKQYKDISKEGFTARL 98
+ ++D+ R ++GI YT + + L ++F ++ + Q K E
Sbjct: 142 RDAADVLRLSLSSGIAMKQYTASQILFALIKIRQFALARDLFDEMVQCKFPLDEYVYTAG 201
Query: 99 IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKL 157
I Y + + AR + M + + + + +N L+ G C N++ + V+ K+ +
Sbjct: 202 IRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVE--VKNSMVER 259
Query: 158 GIEPDLVSYNTIIKAF-------------------------------VD----KGSLDSA 182
GI D V+Y T++ F VD +G +D A
Sbjct: 260 GIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKA 319
Query: 183 NTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDG 242
L + + G+ +L N L+ + RF +AE+++ M N + PN +Y +
Sbjct: 320 FRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHS 379
Query: 243 LAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMN 299
L AL + MR K I V+ + +LI G+ N +A+ N + G +
Sbjct: 380 LCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPS 439
Query: 300 KAIFKLLVPFVCEKGDLDFAFNL 322
A + L+ +C KGDL A L
Sbjct: 440 AASYSPLIAGLCRKGDLASAMEL 462
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 124/291 (42%), Gaps = 11/291 (3%)
Query: 89 ISKEGFTAR--LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEV 146
I+ + +TA L AL K F AR +FDEM + A + A + D
Sbjct: 156 IAMKQYTASQILFALI-KIRQFALARDLFDEMVQCKFPLDEYVYTAGIRAYCEIRNLDGA 214
Query: 147 DGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLL 206
GL + K G++ V YN ++ + A + M ++GI D +T+ TL+
Sbjct: 215 RGLLTRMESK-GVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVY 273
Query: 207 GFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINP 266
GF A ++ + M++++ P+V S + +DGL KA L + + P
Sbjct: 274 GFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVP 333
Query: 267 DVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLC 323
++F ALI + EA+R + G N+ + +L+ +C++G +D A +
Sbjct: 334 NLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMF 393
Query: 324 KRTFSERCLVDQAPLQLVVDRLAKELRVEEAK----ELVELGKTNSYCRYN 370
R + V P +++ + +A+ E+VE G S Y+
Sbjct: 394 DRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYS 444
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 80/184 (43%), Gaps = 4/184 (2%)
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
F +I ++ K A +D+M C V+++ L+ S L +++
Sbjct: 652 FHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEM 711
Query: 154 PHKLG-IEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNG 212
+G P+ +YN + ++G L+ A +L+ +G + +TFNTL+ GF G
Sbjct: 712 --LVGRFLPNSFTYNCFLDFLANEGELEKAK-VLHATILEGCLANTVTFNTLIKGFCKAG 768
Query: 213 RFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFY 272
+ A + + P+ SY+ ++ L KA +L EM K + PD+ +
Sbjct: 769 QIQGAIDLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYN 828
Query: 273 ALIK 276
LI+
Sbjct: 829 ILIR 832
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 7/118 (5%)
Query: 113 KVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKL--GIEPDLVSYNTI 169
KV C ++FN L+ G C K ++ G + + G PD +SY+TI
Sbjct: 740 KVLHATILEGCLANTVTFNTLIKGFC----KAGQIQGAIDLMQNNTESGFFPDCISYSTI 795
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
I G ++ A L EM KG++ D++ +N L+ +G F I+ MVN+
Sbjct: 796 INELCKVGDINKAFQLWNEMLYKGLKPDIVAYNILIRWCNIHGEFDKGLGIYSDMVNL 853
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 70/162 (43%), Gaps = 2/162 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI K+ +A+ + +EM ++N L N + ++ L +
Sbjct: 691 LINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLANEGELEKAKVLHATILE-- 748
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G + V++NT+IK F G + A L+ + G D I+++T++ G A
Sbjct: 749 GCLANTVTFNTLIKGFCKAGQIQGAIDLMQNNTESGFFPDCISYSTIINELCKVGDINKA 808
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
++W M+ ++P++ +YN + I + K L + +M
Sbjct: 809 FQLWNEMLYKGLKPDIVAYNILIRWCNIHGEFDKGLGIYSDM 850
>gi|242034145|ref|XP_002464467.1| hypothetical protein SORBIDRAFT_01g018940 [Sorghum bicolor]
gi|241918321|gb|EER91465.1| hypothetical protein SORBIDRAFT_01g018940 [Sorghum bicolor]
Length = 440
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 161/362 (44%), Gaps = 23/362 (6%)
Query: 14 TTATATGPKF-IGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKR 72
T+ +A P + +R + LV D R T+ +++ RL +R
Sbjct: 52 TSTSARAPVLDLQLAVRAESDPARIHSLVASALSGDDFPRIHTSRQLFSLATSRLTRLRR 111
Query: 73 FRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNA 132
+L+ S G AR ++LY ++A + F P ++ +S +A
Sbjct: 112 PDLAASLLDLLLASTPPSP-GLLARALSLYPGP---DDALRAFSSSP--PAARSDVSLSA 165
Query: 133 LLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKK 192
LL A + + + DE+ G+ P S+N ++ A V L +A LL EM K
Sbjct: 166 LLSAFLRAGRLDEIKSTITLAESSHGVAPGRASHNVLLHALVKNSELAAARKLLDEMANK 225
Query: 193 GIR----LDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
++ D+I++NT+L G EK+ + + N+ PNV +YN R+ + + +
Sbjct: 226 KLKHRPAPDIISYNTVLAGCSVQDDEEGFEKLLKEISLSNLEPNVVTYNCRIQWFSKKGE 285
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS------------GC 296
T K EL+ M SK + P+ T+ AL++G+ EGN+ A R + + G
Sbjct: 286 TVKGEELLDVMESKGVAPNYLTYNALVQGYCKEGNVGAATRVFKRMKVMKRREGRSDLGV 345
Query: 297 GMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKE 356
+ ++ +L + EK LD A +CK F+ + ++ +V+ L K R EAK+
Sbjct: 346 SAHSQVYVVLFRSLVEKEKLDDALWICKSCFAMKAAPPFEAVKGLVEGLVKAGRSTEAKD 405
Query: 357 LV 358
+V
Sbjct: 406 VV 407
>gi|255660844|gb|ACU25591.1| pentatricopeptide repeat-containing protein [Rhaphithamnus
venustus]
Length = 418
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 148/318 (46%), Gaps = 26/318 (8%)
Query: 66 RLANAKRFRWI-----EEILEHQKQ----------YKDISKEGFTARL------IALYGK 104
RL +F W+ ++LEH + YK+I + G+ A L + + K
Sbjct: 90 RLTREHKF-WVPFDTCRKVLEHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCK 148
Query: 105 AAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLV 164
A+ VFD + +V+SFN L+ + DE L K H G++PD+
Sbjct: 149 EGEMRLAQSVFDAITKWGLRPSVVSFNTLMSGYIRLGDLDEGFRL-KSAMHASGVQPDVY 207
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
+Y+ +I + +D AN L EM G+ + +TF TL+ G NGR A +I++ +
Sbjct: 208 TYSVLINGLCKESKMDEANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQL 267
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
++ P++ +YN + GL + K+A +L+ EM KE+ PD T+ LI G EG+L
Sbjct: 268 LSQGFSPDLITYNTLIFGLCKKGDLKQARDLIDEMSMKELKPDKITYTTLIDGSCKEGDL 327
Query: 285 EEA---KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLV 341
E A ++ K ++ + L+ +C++G A + + S D ++
Sbjct: 328 ETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRGMLSVGLKPDNGTYTMI 387
Query: 342 VDRLAKELRVEEAKELVE 359
++ K+ V+ +L++
Sbjct: 388 INEFCKKGDVKTGSKLLK 405
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 81/173 (46%), Gaps = 1/173 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K + A +++ ++ + ++++N L+ + L ++ K
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQLLSQGFSPDLITYNTLIFGLCKKGDLKQARDLIDEMSMK- 305
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
++PD ++Y T+I +G L++A M K+ IRLD + + L+ G GR DA
Sbjct: 306 ELKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDA 365
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
EK+ M+++ ++P+ +Y ++ + K +L+ EM P V T
Sbjct: 366 EKMLRGMLSVGLKPDNGTYTMIINEFCKKGDVKTGSKLLKEMXRDGHVPCVVT 418
>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
Length = 457
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 128/276 (46%), Gaps = 16/276 (5%)
Query: 56 NTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTAR------LIALYGKAAMFE 109
NT Y ++ L A+RF E + ++ ++ +G + LIA + +
Sbjct: 51 NTYTYGYLLRSLCQAQRFE------EARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVD 104
Query: 110 NARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTI 169
A ++ +EM + V+++ +LL K E LF + ++ G PD V YN +
Sbjct: 105 EAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYR-GCPPDGVVYNVL 163
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
I F KG + A L EM +KG + T+N+LL GF G F + +++ M+
Sbjct: 164 IDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGC 223
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
PN+ ++N LDG +A L EMRS PDV ++ L++G ++G EA+R
Sbjct: 224 VPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQR 283
Query: 290 WYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
+SG G + + +L+ + G LD A L
Sbjct: 284 LLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKL 319
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 123/263 (46%), Gaps = 4/263 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K A ++F+EM + C TV ++N+LL +F V LFKD+ +
Sbjct: 163 LIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQ- 221
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G P++ ++N ++ F G + A+ L EM G D++++NTL+ G S G+ +A
Sbjct: 222 GCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEA 281
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+++ M+ V P++ SYN +DG + A++L E+ + PD F++ +I
Sbjct: 282 QRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDC 341
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
G + A + +G + A+ LV +C L + L + C+
Sbjct: 342 LCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPL 401
Query: 335 QAPLQLVVDRLAKELRVEEAKEL 357
L++ +L K R ++ E+
Sbjct: 402 IPEYNLLMYKLCKAKRSDDVCEI 424
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 120/264 (45%), Gaps = 4/264 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+ + K+ ++ +++M G C ++ LL + +++F+E +F+ + +
Sbjct: 23 LLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQ- 81
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G P++ SY+ +I +D A LL EM G + +++T+ +LL G G+ +A
Sbjct: 82 GCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEA 141
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ MV P+ YN +DG + + +A L EM K P VFT+ +L+ G
Sbjct: 142 VDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSG 201
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
F +G + + + GC N F L+ C+ GD+ A L S C D
Sbjct: 202 FSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPD 261
Query: 335 QAPLQLVVDRLAKELRVEEAKELV 358
++ + + + EA+ L+
Sbjct: 262 VVSYNTLMRGMCSKGKPHEAQRLL 285
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 104/236 (44%), Gaps = 4/236 (1%)
Query: 125 QTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANT 184
LS+N LL S + D V G + D+ G P+ +Y ++++ + A +
Sbjct: 15 HGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGA-GCVPNTYTYGYLLRSLCQAQRFEEARS 73
Query: 185 LLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLA 244
+ M +G ++ +++ L+ G + +A ++ M++ +PNV +Y + L GL
Sbjct: 74 VFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLC 133
Query: 245 IEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKA 301
+ K+A++L M + PD + LI GF +G++ EA R + + GC
Sbjct: 134 KMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVF 193
Query: 302 IFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
+ L+ KG+ +L K + C+ + ++D K + EA L
Sbjct: 194 TYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRL 249
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 1/160 (0%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
A+++ EM ++S+N L+ S D LF ++P K G+EPD SY+T
Sbjct: 279 HEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIP-KSGLEPDAFSYST 337
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
II G + +A + +M G D L++G R ++ ++++ MV
Sbjct: 338 IIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFE 397
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDV 268
P + YN + L K++ E+ E+ + +PDV
Sbjct: 398 CVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDV 437
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein
[Arabidopsis lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 1164
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 114/248 (45%), Gaps = 6/248 (2%)
Query: 76 IEEILEHQKQYKDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL 134
+ +++E KQ K + +T +I L + A + F EM G+ + + L+
Sbjct: 723 VWKLIEKMKQ-KGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLV 781
Query: 135 GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGI 194
F ++ H I PD+++Y II F G + A L +EM +G+
Sbjct: 782 DGFCKRGDIRAASKFFYEM-HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGL 840
Query: 195 RLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALE 254
D+ITF L+ G+ G DA ++ M+ PNV +Y +DGL E A E
Sbjct: 841 EPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANE 900
Query: 255 LVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW---YNKSGCGMNKAIFKLLVPFVC 311
L+ EM + P++FT+ +++ G GN+EEA + + +G + + L+ C
Sbjct: 901 LLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC 960
Query: 312 EKGDLDFA 319
+ G++D A
Sbjct: 961 KSGEMDKA 968
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 129/281 (45%), Gaps = 16/281 (5%)
Query: 56 NTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFT-ARLIALYGKAAMFENARKV 114
+T +YT V R + ++ +DI+ + T +I+ + + A K+
Sbjct: 773 DTIVYTTLVDGFCKRGDIRAASKFF-YEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 831
Query: 115 FDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKL--GIEPDLVSYNTIIK 171
F EM R E +++F L+ G C K + F+ H + G P++V+Y T+I
Sbjct: 832 FHEMLCRGLEPDIITFTELMNGYC----KAGHIKDAFRVHNHMIQAGCSPNVVTYTTLID 887
Query: 172 AFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRP 231
+G LDSAN LL+EM K G++ ++ T+N+++ G +G +A K+ +
Sbjct: 888 GLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNA 947
Query: 232 NVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR-- 289
+ +Y +D + KA E++ EM K + P + TF L+ GF G LE+ ++
Sbjct: 948 DTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLL 1007
Query: 290 -WYNKSGCGMNKAIFKLLVPFVCEKGDLDFAF----NLCKR 325
W G N F LV C + +L A ++C R
Sbjct: 1008 NWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSR 1048
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 116/278 (41%), Gaps = 54/278 (19%)
Query: 55 TNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIAL------YGKAAMF 108
T T I +G Q I +++E K + ++ G +I Y KA
Sbjct: 811 TYTAIISGFCQ----------IGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHI 860
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEP------- 161
++A +V + M C V+++ L+ D + L ++ K+G++P
Sbjct: 861 KDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM-WKIGLQPNIFTYNS 919
Query: 162 ----------------------------DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKG 193
D V+Y T++ A+ G +D A +L EM KG
Sbjct: 920 IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKG 979
Query: 194 IRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKAL 253
++ ++TFN L+ GF +G D EK+ M+ + PN ++N + I K A
Sbjct: 980 LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAAT 1039
Query: 254 ELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY 291
+ +M S+ + PD T+ L+KG N N++EA W+
Sbjct: 1040 AIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEA--WF 1075
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 129/293 (44%), Gaps = 40/293 (13%)
Query: 106 AMFENARKVFDEMPGRNCEQTVLSFNALLGACV-NSKKFDEVDGLFKDLPHKLGIEPDLV 164
M ARKVF++M +V S N L + K +F++ P ++G+ ++
Sbjct: 612 GMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAIIVFREFP-EVGVCWNVA 670
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF---------------- 208
SYN +I G ++ A+ LL ME KG D+I+++T++ G+
Sbjct: 671 SYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKM 730
Query: 209 ---------YSNG----------RFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQT 249
Y+ G + A+AE+ + M+ + P+ Y +DG
Sbjct: 731 KQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDI 790
Query: 250 KKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGC-GMNKAI--FKLL 306
+ A + EM S++I PDV T+ A+I GF G++ EA + +++ C G+ I F L
Sbjct: 791 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTEL 850
Query: 307 VPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ C+ G + AF + C + ++D L KE ++ A EL+
Sbjct: 851 MNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLH 903
>gi|297830004|ref|XP_002882884.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297328724|gb|EFH59143.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 409
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 139/278 (50%), Gaps = 6/278 (2%)
Query: 40 LVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDIS-KEGFTARL 98
L+ ++ S ++ +Y + + AK F IEE++ K K E F L
Sbjct: 78 LMPAYQHYSKRKDYQPTESLYALLINKFGQAKMFDEIEEVMSTIKLEKRCRFSEDFFYNL 137
Query: 99 IALYGK-AAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+ +YG A A ++ MP C + SFN +L V++K FDE+ +F P KL
Sbjct: 138 MRIYGNLAGRINRAIEILFGMPDFGCWPSAKSFNFILNLLVSAKLFDEIHKIFVSAP-KL 196
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+E D N +IK + G+L++A LL E K+ R +++TF+ L+ GF + G+F +A
Sbjct: 197 GVEIDACCLNILIKGLCESGNLEAALQLLDEFPKQKSRPNVMTFSPLIRGFCNKGKFEEA 256
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
K+ E M + P+ ++N + GL + + ++ ++L+ M+ K P+ T+ ++ G
Sbjct: 257 FKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKLKGCEPNPGTYQEVLYG 316
Query: 278 FVNEG-NLEEAKRWYNKSGCGMNKAI--FKLLVPFVCE 312
+++ NLE + GM + +K +V +CE
Sbjct: 317 LLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCE 354
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 73/183 (39%), Gaps = 32/183 (17%)
Query: 177 GSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSY 236
G ++ A +L+ M G +FN +L S F + KI+ + + V +
Sbjct: 146 GRINRAIEILFGMPDFGCWPSAKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCL 205
Query: 237 NARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGC 296
N + GL + AL+L+ E ++ P+V TF LI+GF
Sbjct: 206 NILIKGLCESGNLEAALQLLDEFPKQKSRPNVMTFSPLIRGF------------------ 247
Query: 297 GMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKE 356
C KG + AF L +R ER D +++ L K+ RVEE +
Sbjct: 248 --------------CNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGID 293
Query: 357 LVE 359
L+E
Sbjct: 294 LLE 296
>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63130, mitochondrial; Flags: Precursor
gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 115/226 (50%), Gaps = 5/226 (2%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A + D M + C+ ++++ ++ D L K + IEP +V YNTII
Sbjct: 205 AVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQG-KIEPGVVIYNTII 263
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
A + +++ A L EM+ KGIR +++T+N+L+ + GR++DA ++ M+ +
Sbjct: 264 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN 323
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
PNV +++A +D E + +A +L EM + I+PD+FT+ +LI GF L+EAK
Sbjct: 324 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 383
Query: 291 YN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV 333
+ C N + L+ C+ +D L R S+R LV
Sbjct: 384 FELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELF-REMSQRGLV 428
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 147/302 (48%), Gaps = 13/302 (4%)
Query: 20 GPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRF----RW 75
G ++I + N+ ++ F + + G R N Y ++ L N R+ R
Sbjct: 255 GVVIYNTIIDALCNYKNVNDALNLFTEMDNKG-IRPNVVTYNSLIRCLCNYGRWSDASRL 313
Query: 76 IEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLG 135
+ +++E + ++ F+A LI + K A K++DEM R+ + + ++++L+
Sbjct: 314 LSDMIERKINPNVVT---FSA-LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 369
Query: 136 ACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIR 195
+ DE +F+ + K P++V+YNT+IK F +D L EM ++G+
Sbjct: 370 GFCMHDRLDEAKHMFELMISK-DCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLV 428
Query: 196 LDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALEL 255
+ +T+ TL+ GF+ +A+ +++ MV+ V P++ +Y+ LDGL + + AL +
Sbjct: 429 GNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVV 488
Query: 256 VGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCE 312
++ ++ PD++T+ +I+G G +E+ + + G N + ++ C
Sbjct: 489 FEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCR 548
Query: 313 KG 314
KG
Sbjct: 549 KG 550
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 159/368 (43%), Gaps = 44/368 (11%)
Query: 31 IYKENNLKRLVDKFKKSSDLGRFRTNTGI--YTGTVQRLANAKRFRWIEEILEHQKQYKD 88
I + N+LK L D D+ + R I ++ + +A +F + + E Q Q
Sbjct: 54 INRLNDLK-LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGE-QMQNLG 111
Query: 89 ISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVD 147
IS +T + LI + + + A V +M E +++ N+LL + + +
Sbjct: 112 ISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAV 171
Query: 148 GLFKDLPHKLGIEPDLVSYNTIIK------------AFVD-------------------- 175
L + ++G +PD ++NT+I A VD
Sbjct: 172 SLVGQMV-EMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNG 230
Query: 176 ---KGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPN 232
+G +D A +LL +ME+ I ++ +NT++ + DA ++ M N +RPN
Sbjct: 231 LCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPN 290
Query: 233 VRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN 292
V +YN+ + L + A L+ +M ++INP+V TF ALI FV EG L EA++ Y+
Sbjct: 291 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 350
Query: 293 ---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKEL 349
K + + L+ C LD A ++ + S+ C + ++ K
Sbjct: 351 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 410
Query: 350 RVEEAKEL 357
RV+E EL
Sbjct: 411 RVDEGMEL 418
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 104/232 (44%), Gaps = 2/232 (0%)
Query: 56 NTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVF 115
N Y ++ AKR E+ Q + LI + +A +NA+ VF
Sbjct: 395 NVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVF 454
Query: 116 DEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVD 175
+M +++++ LL N+ K + +F+ L + +EPD+ +YN +I+
Sbjct: 455 KQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYL-QRSKMEPDIYTYNIMIEGMCK 513
Query: 176 KGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRS 235
G ++ L + KG++ +++T+ T++ GF G +A+ ++ M P+ +
Sbjct: 514 AGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGT 573
Query: 236 YNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
YN + + + EL+ EMRS D T L+ +++G L+++
Sbjct: 574 YNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTI-GLVTNMLHDGRLDKS 624
>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
Length = 754
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 154/342 (45%), Gaps = 4/342 (1%)
Query: 35 NNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGF 94
NNLK + K S G + + + ++ L A + R +LE Y + E
Sbjct: 168 NNLKLVEIAHAKMSVWG-IKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKT 226
Query: 95 TARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLP 154
++ Y + + A ++ ++M C + +S N ++ + ++ +++
Sbjct: 227 FTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMS 286
Query: 155 HKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRF 214
++ G PD ++NT++ G + A ++ M ++G D+ T+N+++ G G
Sbjct: 287 NQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEV 346
Query: 215 ADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYAL 274
+A + + M+ + PN +YN + L E Q ++A EL + SK I PDV TF +L
Sbjct: 347 KEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSL 406
Query: 275 IKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERC 331
I+G N A + + GC ++ + +L+ +C KG LD A N+ K+ C
Sbjct: 407 IQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGC 466
Query: 332 LVDQAPLQLVVDRLAKELRVEEAKELVELGKTNSYCRYNLKF 373
++D K ++ EA+E+ + + + R ++ +
Sbjct: 467 ARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTY 508
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 142/303 (46%), Gaps = 7/303 (2%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
+++ G+ K ++K ++ G + + Y + L + E L+ Q
Sbjct: 300 TLVNGLCKAGHVKHAIEIMDVMLQEG-YDPDVYTYNSVISGLCKLGEVKEAVEFLD-QMI 357
Query: 86 YKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
+D S T LI+ K E A ++ + + V +FN+L+ ++
Sbjct: 358 TRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHR 417
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
LF+++ K G EPD +YN +I + KG LD A +L +ME G +IT+NTL
Sbjct: 418 VAMELFEEMRSK-GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTL 476
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+ GF + +AE+I++ M V N +YN +DGL ++ + A +L+ +M +
Sbjct: 477 IDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQ 536
Query: 265 NPDVFTFYALIKGFVNEGNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFN 321
PD FT+ +L+ F G++++A + +GC + + L+ +C+ G ++ A
Sbjct: 537 KPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASK 596
Query: 322 LCK 324
L +
Sbjct: 597 LLR 599
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 152/358 (42%), Gaps = 23/358 (6%)
Query: 10 CSFSTTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLAN 69
CS+S + + ++ G KE ++ ++ ++ S+ F + + V L
Sbjct: 255 CSWSNVS-------VNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCK 307
Query: 70 AKRFRWIEEILEHQKQYKDISKEGFTA------RLIALYGKAAMFENARKVFDEMPGRNC 123
A + EI++ Q EG+ +I+ K + A + D+M R+C
Sbjct: 308 AGHVKHAIEIMDVMLQ------EGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDC 361
Query: 124 EQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSAN 183
+++N L+ + +E L + L K GI PD+ ++N++I+ + A
Sbjct: 362 SPNTVTYNTLISTLCKENQVEEATELARVLTSK-GILPDVCTFNSLIQGLCLTRNHRVAM 420
Query: 184 TLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
L EM KG D T+N L+ S G+ +A + + M +V +YN +DG
Sbjct: 421 ELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGF 480
Query: 244 AIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNK 300
+ ++A E+ EM ++ + T+ LI G +E+A + ++ G +K
Sbjct: 481 CKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDK 540
Query: 301 AIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
+ L+ C GD+ A ++ + S C D ++ L K RVE A +L+
Sbjct: 541 FTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLL 598
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 124/311 (39%), Gaps = 43/311 (13%)
Query: 103 GKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPD 162
G++ F++ RK+ ++M CE F L+ + + DE+ G+ + G++PD
Sbjct: 94 GRSGSFDDMRKILEDMKNSGCEMGTSPFLILIESYAQFELQDEILGVVHWMIDDFGLKPD 153
Query: 163 LVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFN-------------------- 202
YN ++ VD +L +M GI+ D+ TFN
Sbjct: 154 THFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLE 213
Query: 203 ---------------TLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEK 247
T++ G+ G A +I E MV + S N + G E
Sbjct: 214 DMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEG 273
Query: 248 QTKKALELVGEMRSKE-INPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIF 303
+ + AL + EM +++ PD +TF L+ G G+++ A + + G + +
Sbjct: 274 RVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTY 333
Query: 304 KLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVEL--- 360
++ +C+ G++ A + + C + ++ L KE +VEEA EL +
Sbjct: 334 NSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTS 393
Query: 361 -GKTNSYCRYN 370
G C +N
Sbjct: 394 KGILPDVCTFN 404
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 88/186 (47%), Gaps = 2/186 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + KA A ++FDEM + +++N L+ S++ ++ L + +
Sbjct: 476 LIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIME- 534
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G +PD +YN+++ F G + A ++ M G D++T+ TL+ G GR A
Sbjct: 535 GQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVA 594
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM-RSKEINPDVFTFYALIK 276
K+ ++ + +YN + GL +++T +A+ L EM E PD ++ + +
Sbjct: 595 SKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFR 654
Query: 277 GFVNEG 282
G N G
Sbjct: 655 GLCNGG 660
>gi|255556314|ref|XP_002519191.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541506|gb|EEF43055.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 719
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 133/269 (49%), Gaps = 5/269 (1%)
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
+ A + ALY + E F++M V S+N ++ + D+ FK++
Sbjct: 430 YLALIKALYMAGKVTE-GNHYFNQMVKDGLLCNVCSYNMVIDCFCKTSMMDKATNTFKEM 488
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
+K GI P+LV++NT+I + G + + LL + + G + D+ TF++++ G +
Sbjct: 489 QYK-GIPPNLVTFNTLIDGYCKGGEICKSRDLLVMLLEHGFKPDIFTFSSIIDGLCRAKQ 547
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
DA + MV + PN +YN + L I ++++L+ +M++ INPDVF+F A
Sbjct: 548 IEDALGCFSEMVMWGLSPNAVTYNILIHSLCIIGDVPRSMKLLRKMQTDGINPDVFSFNA 607
Query: 274 LIKGFVNEGNLEEAKRWYNKS---GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSER 330
LI+ F G +E+AK+ ++ G + + + C+ G + A L +
Sbjct: 608 LIQSFCRMGKVEDAKKLFSSMLSLGLIPDNYTYVAFIKVFCQSGRFNEAKELFLSMEANG 667
Query: 331 CLVDQAPLQLVVDRLAKELRVEEAKELVE 359
C+ D +++D L K+ + E A+++ +
Sbjct: 668 CMPDSFTCNIILDALVKQDQFEAAQKIAK 696
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/232 (20%), Positives = 102/232 (43%), Gaps = 4/232 (1%)
Query: 129 SFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
+FN + + +EV + + G++ +Y +IKA G + N +
Sbjct: 394 TFNIAMNCLIKGFDLNEVCNILDRFVEQ-GMKFGFSTYLALIKALYMAGKVTEGNHYFNQ 452
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
M K G+ ++ ++N ++ F A ++ M + PN+ ++N +DG +
Sbjct: 453 MVKDGLLCNVCSYNMVIDCFCKTSMMDKATNTFKEMQYKGIPPNLVTFNTLIDGYCKGGE 512
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS---GCGMNKAIFKL 305
K+ +L+ + PD+FTF ++I G +E+A +++ G N + +
Sbjct: 513 ICKSRDLLVMLLEHGFKPDIFTFSSIIDGLCRAKQIEDALGCFSEMVMWGLSPNAVTYNI 572
Query: 306 LVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
L+ +C GD+ + L ++ ++ D ++ + +VE+AK+L
Sbjct: 573 LIHSLCIIGDVPRSMKLLRKMQTDGINPDVFSFNALIQSFCRMGKVEDAKKL 624
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 59/121 (48%)
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
LGI P YN +I A V SLD A +M + D T+N L+ G +G +
Sbjct: 211 LGISPSTRLYNAVIDALVKSNSLDLAYLKFQQMSADNCKPDRFTYNILIHGVCRSGVVDE 270
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
A ++ + M + PNV +Y +DG K+ +A ++ M++++++P T + I
Sbjct: 271 ALRLVKQMEGLGYSPNVFTYTILIDGFFNAKKVDEAFRVLETMKARKVSPSEATIRSFIH 330
Query: 277 G 277
G
Sbjct: 331 G 331
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 81/183 (44%), Gaps = 7/183 (3%)
Query: 87 KDISKEGFTAR------LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNS 140
KDI G+ LI +G+ + + ++F ++ + +NA++ A V S
Sbjct: 171 KDIKASGYRINEELLCILIGSWGRLGLAKYCDEIFGQISFLGISPSTRLYNAVIDALVKS 230
Query: 141 KKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLIT 200
D F+ + +PD +YN +I G +D A L+ +ME G ++ T
Sbjct: 231 NSLDLAYLKFQQMSAD-NCKPDRFTYNILIHGVCRSGVVDEALRLVKQMEGLGYSPNVFT 289
Query: 201 FNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMR 260
+ L+ GF++ + +A ++ ETM V P+ + + + G+ KA EL E
Sbjct: 290 YTILIDGFFNAKKVDEAFRVLETMKARKVSPSEATIRSFIHGVFRCVAPNKAFELAIEFI 349
Query: 261 SKE 263
+E
Sbjct: 350 ERE 352
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 51/122 (41%), Gaps = 7/122 (5%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
+ K+ +M V SFNAL+ + K ++ LF + LG+ PD +Y I
Sbjct: 586 SMKLLRKMQTDGINPDVFSFNALIQSFCRMGKVEDAKKLFSSM-LSLGLIPDNYTYVAFI 644
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI------WETM 224
K F G + A L ME G D T N +L +F A+KI W +
Sbjct: 645 KVFCQSGRFNEAKELFLSMEANGCMPDSFTCNIILDALVKQDQFEAAQKIAKTCSEWGIL 704
Query: 225 VN 226
VN
Sbjct: 705 VN 706
>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 583
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 113/220 (51%), Gaps = 4/220 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K M + A KVFD++ + V++FN ++ A +E L + +
Sbjct: 349 LINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDE- 407
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
GI P++ +YN +I K L +A LL EME KG++ D++T+N L+ G N + +A
Sbjct: 408 GILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNA 467
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
EK+ M N+ ++PN +YN +DG +E + K AL + M + P+V T+ LIKG
Sbjct: 468 EKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKG 527
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKG 314
+ LE A N + G N+ + ++ + EKG
Sbjct: 528 YCKINKLEAANGLLNEMLEKGLNPNRTTYDIVRLEMLEKG 567
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 139/277 (50%), Gaps = 11/277 (3%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACV--NSKKFDEVDGLFKDLPHKLGIE 160
+A A ++M V+++N L+ G C ++ K + + K++ I
Sbjct: 212 RAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLAN-KIC 270
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
P+ V++NT+I F ++ +A EM+K+G++ +++T+N+L+ G +NG+ +A +
Sbjct: 271 PNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDL 330
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
W+ MV + ++PN+ +YNA ++G +K K+A ++ ++ +E+ P+V TF +I +
Sbjct: 331 WDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCK 390
Query: 281 EGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAP 337
EG +EE + G N + + L+ +C K DL A L ++ D
Sbjct: 391 EGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVT 450
Query: 338 LQLVVDRLAKELRVEEAK----ELVELGKTNSYCRYN 370
+++D L K + A+ E+ LG ++ YN
Sbjct: 451 YNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYN 487
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 145/350 (41%), Gaps = 59/350 (16%)
Query: 67 LANAKRFRWIEEILEH-------------QKQYKDISKEGFTARLIAL----YGKAAMFE 109
LAN+KR+ + L+ D + G TA +I + Y K
Sbjct: 88 LANSKRYSKVRSFLDSFVKNEKHTVSSVFHSLLLDGGRPGATALIIDMLVLAYVKNLELH 147
Query: 110 NARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTI 169
A + F + ++ S N LL A V K +V+ ++K++ K I +L ++N
Sbjct: 148 CAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMI-KRRIHTNLNTFNIF 206
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFY---SNGRFADAEKIWETMVN 226
I G L+ A + +M+ GI +++T+NTL+ G+ S G+ AE + M+
Sbjct: 207 INGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLA 266
Query: 227 MNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEE 286
+ PN ++N +DG ++ A + EM+ + + P++ T+ +LI G N G LEE
Sbjct: 267 NKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEE 326
Query: 287 A-KRWYNKSGCGM-------------------------------------NKAIFKLLVP 308
A W G G+ N F ++
Sbjct: 327 AIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMID 386
Query: 309 FVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
C++G ++ F+LC E L + + ++ L ++ ++ AKEL+
Sbjct: 387 AYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELL 436
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 56/110 (50%), Gaps = 3/110 (2%)
Query: 110 NARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
NA K+ +EM + +++N L+ G C+ K ++ + K +P++V+YN
Sbjct: 466 NAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALN--VRTRMEKERKQPNVVTYNV 523
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAE 218
+IK + L++AN LL EM +KG+ + T++ + L G D E
Sbjct: 524 LIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIVRLEMLEKGFSPDIE 573
>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Brachypodium distachyon]
Length = 556
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 133/307 (43%), Gaps = 4/307 (1%)
Query: 56 NTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVF 115
G YT V L+ A +E + + K+ F + +I Y + A +VF
Sbjct: 217 TVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNVRRASEVF 276
Query: 116 DEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVD 175
DE G E ++ AL+ + + + L D+ + G+ + + +NT+I +
Sbjct: 277 DECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLR-GVGHNQIVFNTMIDGYCR 335
Query: 176 KGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRS 235
G ++ A + MEK GI LD+ T+NTL G R DA+K+ M V PN S
Sbjct: 336 HGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVS 395
Query: 236 YNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW---YN 292
Y + A E +A L +M K P V T+ +I G++ G++ EA+R+
Sbjct: 396 YTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEME 455
Query: 293 KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVE 352
K G + + LV C G +D A L + + +V LAKE R E
Sbjct: 456 KKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSE 515
Query: 353 EAKELVE 359
EA +L +
Sbjct: 516 EAFQLYD 522
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 124/289 (42%), Gaps = 7/289 (2%)
Query: 23 FIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEH 82
F +VI + N++R + F + G N Y + + E +L
Sbjct: 255 FYSAVINAYCRGGNVRRASEVFDECVGHG-VEPNERTYGALINGFCKIGQIEAAEMLLA- 312
Query: 83 QKQYKDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSK 141
Q + + +I Y + M E A ++ M E + ++N L
Sbjct: 313 DMQLRGVGHNQIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVN 372
Query: 142 KFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITF 201
+ ++ L + K G+ P+ VSY T+I +G + A L +ME KG R ++T+
Sbjct: 373 RMEDAKKLLHIMAEK-GVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTY 431
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS 261
N ++ G+ NG +AE+ + M + P++ +Y + G + + AL L EM+
Sbjct: 432 NVMIDGYIKNGSIREAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKH 491
Query: 262 KEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLV 307
+ P+V + AL+ G EG EEA + Y+ +G + ++ +LV
Sbjct: 492 RGTKPNVVAYTALVSGLAKEGRSEEAFQLYDDMLAAGLTPDDTLYSVLV 540
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 89/184 (48%), Gaps = 1/184 (0%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K+ ++A + DE+P +N+LL + + D V GL K++ ++ G+EP +
Sbjct: 160 KSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKEMENR-GVEPTV 218
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
+Y ++ G + + EM++K + D+ ++ ++ + G A ++++
Sbjct: 219 GTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNVRRASEVFDE 278
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
V V PN R+Y A ++G Q + A L+ +M+ + + + F +I G+ G
Sbjct: 279 CVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGM 338
Query: 284 LEEA 287
+E+A
Sbjct: 339 VEKA 342
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 92/198 (46%), Gaps = 5/198 (2%)
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA-EKIWE 222
+S + ++ F GS+D A+ LL E+ + G+ L+ +N+ LL Y+ R DA + +
Sbjct: 149 LSASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNS-LLDSYTRQRNDDAVAGLLK 207
Query: 223 TMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEG 282
M N V P V +Y +DGL+ K + EM+ K + DV+ + A+I + G
Sbjct: 208 EMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGG 267
Query: 283 NLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQ 339
N+ A +++ G N+ + L+ C+ G ++ A L +Q
Sbjct: 268 NVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFN 327
Query: 340 LVVDRLAKELRVEEAKEL 357
++D + VE+A E+
Sbjct: 328 TMIDGYCRHGMVEKALEI 345
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 77/151 (50%), Gaps = 1/151 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI+++ K AR++F +M G+ +V+++N ++ + + E + K++ K
Sbjct: 399 LISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEM-EKK 457
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ PD+ +Y ++ G +D A L EM+ +G + +++ + L+ G GR +A
Sbjct: 458 GLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEA 517
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
++++ M+ + P+ Y+ + L + +
Sbjct: 518 FQLYDDMLAAGLTPDDTLYSVLVGSLHTDSR 548
>gi|125559009|gb|EAZ04545.1| hypothetical protein OsI_26694 [Oryza sativa Indica Group]
Length = 784
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 131/263 (49%), Gaps = 4/263 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI+ + A+++ A +VFDEM E ++FN+LL +++ DE + +++ ++
Sbjct: 249 LISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEM-ERV 307
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G P +V+YN++I ++V G L+ A L EME KGI+ D++T+ TL+ G G+ A
Sbjct: 308 GCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTLISGLDRAGKIDAA 367
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ MV +PN+ +YNA + + + + + + E+RS PD+ T+ L+
Sbjct: 368 IVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDELRSAGFVPDIVTWNTLLAV 427
Query: 278 FVNEGNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
F G E + K+G + + L+ G D A + KR D
Sbjct: 428 FGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPD 487
Query: 335 QAPLQLVVDRLAKELRVEEAKEL 357
+ V+ LA+ R E+A++L
Sbjct: 488 VSTYNAVLSALARGGRWEQAEKL 510
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 107/210 (50%), Gaps = 2/210 (0%)
Query: 80 LEHQKQYKDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACV 138
L+ + + K I + T LI+ +A + A +DEM C+ + ++NAL+
Sbjct: 335 LKQEMEVKGIKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHG 394
Query: 139 NSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL 198
KF E+ +F +L G PD+V++NT++ F G + + EM+K G +
Sbjct: 395 VRGKFPEMMAVFDEL-RSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPER 453
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
T+ +L+ + G F A +I++ M+ + P+V +YNA L LA + ++A +L E
Sbjct: 454 DTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAE 513
Query: 259 MRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
M ++ PD +++ +L+ + N L++ K
Sbjct: 514 MEERDCKPDEYSYSSLLHAYANAKRLDKMK 543
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 105/221 (47%), Gaps = 10/221 (4%)
Query: 93 GFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSK---KFDEVDGL 149
+TA L++ + +A F +A VF M + ++++N +L V SK + EV L
Sbjct: 174 AYTA-LVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLH--VYSKMAVPWKEVVEL 230
Query: 150 FKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFY 209
+ G+ PD +YNT+I + A + EM+ G D +TFN+LL +
Sbjct: 231 VASMKEH-GVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYG 289
Query: 210 SNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVF 269
R +A ++ + M + P+V +YN+ + + ++A+ L EM K I PDV
Sbjct: 290 KARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVV 349
Query: 270 TFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLV 307
T+ LI G G ++ A Y+ ++GC N + L+
Sbjct: 350 TYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALI 390
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 76/145 (52%), Gaps = 1/145 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
++++YGK M K+ M + ++N+L+ ++ + + ++
Sbjct: 599 MVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSS- 657
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ PD SYNT+I A+ KG + A+ L EM+ G++ D++T+N + + SN F +A
Sbjct: 658 GVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEA 717
Query: 218 EKIWETMVNMNVRPNVRSYNARLDG 242
++ MV +PN R+YN+ ++G
Sbjct: 718 IELVRYMVTQGCKPNERTYNSIVEG 742
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 128/280 (45%), Gaps = 15/280 (5%)
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
Y D+S + A L AL + +E A K+F EM R+C+ S+++LL A N+K+ D+
Sbjct: 485 YPDVST--YNAVLSAL-ARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDK 541
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGS----LDSANTLLYEMEKKGIRLDLITF 201
+ L D+ + IEP +N ++K V S L A E+ +K LD+
Sbjct: 542 MKALSDDI-YSERIEP----HNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVL 596
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS 261
N ++ + N EKI M + + +YN+ + + +K ++ E++S
Sbjct: 597 NAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKS 656
Query: 262 KEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDF 318
+ PD +++ +I + +G ++EA R +++ SG + + + V +
Sbjct: 657 SGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEE 716
Query: 319 AFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
A L + ++ C ++ +V+ + ++ +AK V
Sbjct: 717 AIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAKIFV 756
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 105/229 (45%), Gaps = 1/229 (0%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMP 119
Y+ + ANAKR ++ + + + L+ + K A K F E+
Sbjct: 526 YSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELR 585
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL 179
+ C + NA++ ++ +V+ + L + I +YN+++ + G
Sbjct: 586 QKRCSLDINVLNAMVSIYGKNRMVRKVEKIL-SLMKESAINLSAATYNSLMHMYSRLGDC 644
Query: 180 DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNAR 239
+ +L E++ G+R D ++NT++ + G+ +A +++ M ++P+V +YN
Sbjct: 645 EKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIF 704
Query: 240 LDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
+ ++A+ELV M ++ P+ T+ ++++G+ G L +AK
Sbjct: 705 VKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAK 753
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 8/144 (5%)
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
T I+ G L A+ LL D + L+ F GRF DA ++ MV+
Sbjct: 146 TAIRVMARAGRLAEASALL----DAAPGPDAGAYTALVSAFSRAGRFRDAVAVFRRMVDS 201
Query: 228 NVRPNVRSYNARLDGLA-IEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEE 286
V+P + +YN L + + K+ +ELV M+ + PD +T+ LI +E
Sbjct: 202 GVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKE 261
Query: 287 AKRWYNK---SGCGMNKAIFKLLV 307
A + +++ SG +K F L+
Sbjct: 262 AAQVFDEMKASGFEPDKVTFNSLL 285
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/200 (20%), Positives = 78/200 (39%), Gaps = 41/200 (20%)
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSN--------- 211
PD +Y ++ AF G A + M G++ ++T+N ++L YS
Sbjct: 170 PDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYN-VVLHVYSKMAVPWKEVV 228
Query: 212 ----------------------------GRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
+ +A ++++ M P+ ++N+ LD
Sbjct: 229 ELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVY 288
Query: 244 AIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA---KRWYNKSGCGMNK 300
++ +A+E++ EM P V T+ +LI +V +G LE+A K+ G +
Sbjct: 289 GKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDV 348
Query: 301 AIFKLLVPFVCEKGDLDFAF 320
+ L+ + G +D A
Sbjct: 349 VTYTTLISGLDRAGKIDAAI 368
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 134/267 (50%), Gaps = 5/267 (1%)
Query: 104 KAAMFENARKVFDEM-PGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPD 162
KA + A +V EM G++ +++++ ++ + D + +++ + GI PD
Sbjct: 53 KARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPD 112
Query: 163 LVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW- 221
+V+Y +++ G +D A ++ EM+ KG+ D TF+ L+ G+ + + +A K++
Sbjct: 113 VVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYK 172
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
E + + + +P+V +Y A +DG +KA++++G M ++ P+V T+ +L+ G
Sbjct: 173 EILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKA 232
Query: 282 GNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPL 338
G+L++A R GC N + L+ +C +D A L + C D
Sbjct: 233 GDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSY 292
Query: 339 QLVVDRLAKELRVEEAKELVELGKTNS 365
++D + R+EEAK+L + T S
Sbjct: 293 NALLDGYCRLGRIEEAKQLFKEMATKS 319
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/343 (21%), Positives = 153/343 (44%), Gaps = 11/343 (3%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
S++ G+ K +L + +D F++ + G N YT + L A + +++
Sbjct: 224 SLLHGLCKAGDLDQALDLFRRMTSKGCV-PNVVTYTTLIHGLCAAHKVDAARLLMDEMTA 282
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
L+ Y + E A+++F EM ++C +++ L+ N+ + +E
Sbjct: 283 TCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEE 342
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
L +++ GI+PD+V+Y+ ++ + A + EM + + + +T+++L+
Sbjct: 343 ARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLI 402
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEIN 265
G GR A ++ + MVN V P+V ++N+ + L +A +L+ M + +
Sbjct: 403 DGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLE 462
Query: 266 PDVFTFYALIKGFVNEGNLEEAKRWYNKSGCG----------MNKAIFKLLVPFVCEKGD 315
P + T+ L++GF G +E A + + + F L+ +C+ +
Sbjct: 463 PGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKARE 522
Query: 316 LDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
+D A + + S C + +VD L + R EEA +L+
Sbjct: 523 IDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLI 565
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 118/242 (48%), Gaps = 11/242 (4%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFT-ARLIALYGKAAMFENARKVFDEM 118
YT V+ NA R +LE+ K I + T + ++A Y +A F A + EM
Sbjct: 327 YTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEM 386
Query: 119 PGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGS 178
RN +++++L+ + + D + K++ +K +EP + ++N++I A G
Sbjct: 387 IARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKR-VEPSVGTFNSVIGALCRLGD 445
Query: 179 LDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM--------VNMNVR 230
+D A LL M G+ ++T+ TLL GF GR A +++E M N+
Sbjct: 446 MDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLV 505
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
P ++++A + GL ++ KA+ +V E+RS+E P A++ G + G EEA +
Sbjct: 506 PE-QAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKL 564
Query: 291 YN 292
N
Sbjct: 565 IN 566
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 155/341 (45%), Gaps = 13/341 (3%)
Query: 26 SVIRGIYKENNLKRLVDKFK----KSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILE 81
SV+ G+ ++ + R + + K + +F T + + TG + + +EIL
Sbjct: 118 SVVDGLCRDGKMDRACEMVREMKLKGVEPDKF-TFSALITGWCNARKVDEALKLYKEILT 176
Query: 82 HQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSK 141
D+ +TA LI + K+ E A K+ M GR C V+++++LL +
Sbjct: 177 SSSWKPDVVT--YTA-LIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAG 233
Query: 142 KFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITF 201
D+ LF+ + K G P++V+Y T+I +D+A L+ EM D +++
Sbjct: 234 DLDQALDLFRRMTSK-GCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSY 292
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS 261
N LL G+ GR +A+++++ M + P+ +Y + G + ++A L+ M++
Sbjct: 293 NALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKT 352
Query: 262 KE-INPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLD 317
I+PDV T+ ++ G+ EA + + N + L+ +C+ G +D
Sbjct: 353 AAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVD 412
Query: 318 FAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
A + K ++R V+ L + ++EA +L+
Sbjct: 413 HAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLL 453
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 155/345 (44%), Gaps = 9/345 (2%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
+I G K N LK+ + F+K + N Y V L A+ E+L+ +
Sbjct: 13 IIDGFCKANQLKQALACFEKMREF--VAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDG 70
Query: 87 KDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRN-CEQTVLSFNALLGACVNSKKFD 144
K ++ + T + +I + K + A ++ EM R+ V+++ +++ K D
Sbjct: 71 KSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMD 130
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE-MEKKGIRLDLITFNT 203
+ +++ K G+EPD +++ +I + + +D A L E + + D++T+
Sbjct: 131 RACEMVREMKLK-GVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTA 189
Query: 204 LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
L+ GF +G A K+ M PNV +Y++ L GL +AL+L M SK
Sbjct: 190 LIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKG 249
Query: 264 INPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAF 320
P+V T+ LI G ++ A+ ++ + C + + L+ C G ++ A
Sbjct: 250 CVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAK 309
Query: 321 NLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKTNS 365
L K ++ CL D+ +V R+EEA+ L+E KT +
Sbjct: 310 QLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAA 354
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 126/278 (45%), Gaps = 43/278 (15%)
Query: 123 CEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSA 182
C+ TV+++ ++ + + + F+ + + + P+ +YN ++ A
Sbjct: 3 CQPTVVTWTIIIDGFCKANQLKQALACFEKM--REFVAPNERTYNVVVNGLCKARLTSKA 60
Query: 183 NTLLYEM-EKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN-VRPNVRSYNARL 240
+L EM + K + DL+T++T++ GF G A +I MV + + P+V +Y + +
Sbjct: 61 YEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVV 120
Query: 241 DGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN-------- 292
DGL + + +A E+V EM+ K + PD FTF ALI G+ N ++EA + Y
Sbjct: 121 DGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSW 180
Query: 293 ---------------KSG----------------CGMNKAIFKLLVPFVCEKGDLDFAFN 321
KSG C N + L+ +C+ GDLD A +
Sbjct: 181 KPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALD 240
Query: 322 LCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
L +R S+ C+ + ++ L +V+ A+ L++
Sbjct: 241 LFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMD 278
>gi|255660862|gb|ACU25600.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana]
Length = 484
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 143/320 (44%), Gaps = 34/320 (10%)
Query: 73 FRWIEE--ILEHQKQYK---------------------DISKEGFT------ARLIALYG 103
FRW+E + EH ++ D+ K+G +I YG
Sbjct: 32 FRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYG 91
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K + + + K+F +M E+T+ S+NAL + ++ F + + GIEP
Sbjct: 92 KEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSE-GIEPTR 150
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
++N +I F G +++AN +M+ + I D++T+NT++ G+Y + +AEK +
Sbjct: 151 HTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVE 210
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M N+ P V +Y + G Q AL LV EM+ I P+ T+ L+ G N
Sbjct: 211 MKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEK 270
Query: 284 LEEA----KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQ 339
+ EA K +K + +I L+ C+ G+LD A ++ K +
Sbjct: 271 MSEARVILKEMMDKYLAPTDNSIIMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYG 330
Query: 340 LVVDRLAKELRVEEAKELVE 359
L+++ K + ++A +L++
Sbjct: 331 LLIENFCKAGQYDKAVKLLD 350
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 100/234 (42%), Gaps = 46/234 (19%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I Y + E A K F EM GRN E TV+++ L+ V+ + D+ L +++
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMK-GF 249
Query: 158 GIEPDLVSYNT----------------IIKAFVDK--------------------GSLDS 181
GI+P+ ++Y+T I+K +DK G+LD+
Sbjct: 250 GIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIIMRLISSHCKSGNLDA 309
Query: 182 ANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV--RPNV------ 233
A +L M + + + + L+ F G++ A K+ + ++ ++ RP
Sbjct: 310 AADVLKAMIRLSVPTEAGHYGLLIENFCKAGQYDKAVKLLDKLIEKDIILRPQSTLHLEP 369
Query: 234 RSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+YN+ ++ L Q KA LV ++ + D LI+G EG+ + A
Sbjct: 370 SAYNSMIEYLCNNGQASKAETLVRQLMKLGVQ-DPTALNTLIRGHSQEGSPDSA 422
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 76/162 (46%), Gaps = 10/162 (6%)
Query: 90 SKEGFTARLIALYGKAAMFENARKVFDEM--------PGRNCEQTVLSFNALLGACVNSK 141
++ G LI + KA ++ A K+ D++ P ++N+++ N+
Sbjct: 324 TEAGHYGLLIENFCKAGQYDKAVKLLDKLIEKDIILRPQSTLHLEPSAYNSMIEYLCNNG 383
Query: 142 KFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITF 201
+ + + L + L KLG++ D + NT+I+ +GS DSA LL M ++ + + +
Sbjct: 384 QASKAETLVRQL-MKLGVQ-DPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAY 441
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
N L+ + DA+ ++M+ + P+ + + ++ L
Sbjct: 442 NLLVQSYLKKNEPXDAKAALDSMIENDHLPDSALFRSVMESL 483
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 99/250 (39%), Gaps = 17/250 (6%)
Query: 39 RLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEIL-EHQKQYKDISKEGFTAR 97
RLV++ K + N Y+ + L NA++ IL E +Y + R
Sbjct: 241 RLVEEMKGFG----IKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIIMR 296
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHK- 156
LI+ + K+ + A V M + + L+ + ++D+ L L K
Sbjct: 297 LISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGLLIENFCKAGQYDKAVKLLDKLIEKD 356
Query: 157 --------LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
L +EP +YN++I+ + G A TL+ ++ K G++ D NTL+ G
Sbjct: 357 IILRPQSTLHLEPS--AYNSMIEYLCNNGQASKAETLVRQLMKLGVQ-DPTALNTLIRGH 413
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDV 268
G A ++ + M+ V +YN + + + A + M + PD
Sbjct: 414 SQEGSPDSAFELLKIMLRRKVDSEKSAYNLLVQSYLKKNEPXDAKAALDSMIENDHLPDS 473
Query: 269 FTFYALIKGF 278
F ++++
Sbjct: 474 ALFRSVMESL 483
>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 157/340 (46%), Gaps = 11/340 (3%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
S+I G + N++ F + G R N YT + L A R E I +K
Sbjct: 254 SLILGYCRNNDVNSAYKVFNMMPNKG-CRRNEVSYTTIIHGLCEAGRID--EGISLFKKM 310
Query: 86 YKD---ISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKK 142
+D + +T + AL+G E +F+EM R+CE V ++ ++ A +K
Sbjct: 311 REDDCYPTVRTYTVIIHALFGNDRNLE-GMDLFNEMRERSCEPNVHTYTVMVDAMCKERK 369
Query: 143 FDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFN 202
DE + ++ K G+ P +V+YN +I+ + ++G +++A +L ME R + T+N
Sbjct: 370 LDESRRILNEMMEK-GLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYN 428
Query: 203 TLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
L+ GF A + M+ + P++ +YN+ + A +L+ ++
Sbjct: 429 ELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKEN 488
Query: 263 EINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFA 319
+ PD +T+ I +EEA +N + G N+ ++ L+ C+ G +D A
Sbjct: 489 GLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEA 548
Query: 320 FNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+L +R SE CL + + ++ + KE +V+E +VE
Sbjct: 549 ISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVE 588
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 84/388 (21%), Positives = 157/388 (40%), Gaps = 56/388 (14%)
Query: 18 ATGPKFIGSVIRGIYKENNLKRLVD---KFKKSSDLGRFRTNTGIYTGTVQRLANAKRFR 74
G K S+I+ ++++ L+D + + + +F+ + Y + LA RF
Sbjct: 137 GVGEKIRISMIKACVSVDDIRFLLDFLRQMNRDDNDIKFKLSVRSYNELLMMLA---RFL 193
Query: 75 WIEEILEHQKQYKDISKEGFTARLIAL------YGKAAMFENARKVFDEMPGRNCEQTVL 128
I+E+ ++ Y ++ + + L Y K A ++
Sbjct: 194 MIDEM---KRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSF 250
Query: 129 SFNAL-LGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLY 187
++ +L LG C N+ + +F +P+K G + VSY TII + G +D +L
Sbjct: 251 TYTSLILGYCRNND-VNSAYKVFNMMPNK-GCRRNEVSYTTIIHGLCEAGRIDEGISLFK 308
Query: 188 EMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEK 247
+M + + T+ ++ + N R + ++ M + PNV +Y +D + E+
Sbjct: 309 KMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKER 368
Query: 248 QTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA---------------KRWYN 292
+ ++ ++ EM K + P V T+ ALI+G+ EG +E A +R YN
Sbjct: 369 KLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYN 428
Query: 293 KSGCGMNK-----------------------AIFKLLVPFVCEKGDLDFAFNLCKRTFSE 329
+ CG +K + L+ C+ G D A+ L
Sbjct: 429 ELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKEN 488
Query: 330 RCLVDQAPLQLVVDRLAKELRVEEAKEL 357
+ DQ + +D L K R+EEA +L
Sbjct: 489 GLVPDQWTYSVFIDTLCKSKRMEEACDL 516
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 109/248 (43%), Gaps = 4/248 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K A + +M +++++N+L+ + FD L DL +
Sbjct: 430 LICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLL-DLLKEN 488
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ PD +Y+ I ++ A L +++KGI+ + + + L+ G G+ +A
Sbjct: 489 GLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEA 548
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ E M + + PN +YN+ + G+ E + ++ L +V M + P V T+ LI+
Sbjct: 549 ISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEE 608
Query: 278 FVNEGNLEEAKRWYNKS---GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
+ EG+ + A R +N+ G + + + C G++ A + R + D
Sbjct: 609 MLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPD 668
Query: 335 QAPLQLVV 342
L++
Sbjct: 669 SLTYTLLI 676
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 106/252 (42%), Gaps = 6/252 (2%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMP 119
Y + A F ++L+ K+ + + + I K+ E A +F+ +
Sbjct: 462 YNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLK 521
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL 179
+ + + + AL+ + K DE L + + H P+ +YN++I +G +
Sbjct: 522 EKGIKANEVMYTALIDGHCKAGKIDEAISLLERM-HSEDCLPNSSTYNSLIYGVCKEGKV 580
Query: 180 DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNAR 239
+++ M K G++ + T+ L+ G F A +++ MV+ +P+V +Y A
Sbjct: 581 QEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAF 640
Query: 240 LDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA----KRWYNKSG 295
+ K+A ++ M + PD T+ LI + G +A KR + +G
Sbjct: 641 IHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLD-AG 699
Query: 296 CGMNKAIFKLLV 307
C + I+ L+
Sbjct: 700 CDPSHPIWNNLI 711
>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
Length = 687
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 141/301 (46%), Gaps = 9/301 (2%)
Query: 30 GIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTV--QRLANAKRFRWIEEILEHQKQYK 87
G+ + + K ++ F KS G G YT ++ L + EE+L+
Sbjct: 310 GLSRNGDSKAMLSLFGKSLKNG---VTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAG 366
Query: 88 DISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVD 147
+ LI Y + E A F +M R+ + +++NAL+ +++
Sbjct: 367 LVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQ 426
Query: 148 GLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLG 207
L ++ G+ P + ++NT+I A+ G L+ +L EM++ G++ +++++ +++
Sbjct: 427 DLLMEMQDN-GVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNA 485
Query: 208 FYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPD 267
F NG+ +A I + M + +V PN + YNA +D +A LV +M+S I+P
Sbjct: 486 FCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPS 545
Query: 268 VFTFYALIKGFVNEGNLEEAKRWYNKSGCGM---NKAIFKLLVPFVCEKGDLDFAFNLCK 324
+ T+ LIKG N+ + EA+ N + + L+ C +G++D A +L +
Sbjct: 546 IVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQ 605
Query: 325 R 325
R
Sbjct: 606 R 606
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 109/235 (46%), Gaps = 3/235 (1%)
Query: 60 YTGTVQRLANAKRFRWIEEIL-EHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEM 118
Y + L A+R +++L E Q + + E F LI YG+ E V EM
Sbjct: 409 YNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNT-LIDAYGRTGQLEKCFIVLSEM 467
Query: 119 PGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGS 178
+ V+S+ +++ A + K E + D+ HK + P+ YN II A+V+ G
Sbjct: 468 QENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHK-DVLPNAQVYNAIIDAYVEHGP 526
Query: 179 LDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNA 238
D A L+ +M+ GI ++T+N L+ G + + ++AE+I ++ N + P+ SYN
Sbjct: 527 NDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNT 586
Query: 239 RLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK 293
+ KAL+L M I V T++ LI G G L E + Y K
Sbjct: 587 LISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQK 641
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 109/233 (46%), Gaps = 4/233 (1%)
Query: 129 SFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
S+N ++ + + + +F ++ + + P+ ++YNT+I + G L++ +L +
Sbjct: 198 SYNVVIAGMWRAGRGGDAVEVFDEMTER-AVLPNHITYNTMIDGHIKGGDLEAGFSLRDQ 256
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
M G++ + IT+N LL G GR + + + M + + P+ +Y+ DGL+
Sbjct: 257 MVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGD 316
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL---EEAKRWYNKSGCGMNKAIFKL 305
+K L L G+ + +T L+ G +G + EE + +G + I+
Sbjct: 317 SKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNT 376
Query: 306 LVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
L+ C+ G+L+ AF+ + S D +++ L K R+ A++L+
Sbjct: 377 LINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLL 429
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 3/171 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLP-HK 156
+I Y + + A + ++M +++++N L+ N + E + + L H+
Sbjct: 517 IIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHR 576
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
L PD VSYNT+I A +G++D A L M K GI+ + T++ L+ G GR +
Sbjct: 577 L--IPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIE 634
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPD 267
E +++ M+ NV P+ +N ++ + KA +L EM K N D
Sbjct: 635 MEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKRNNHD 685
>gi|255660918|gb|ACU25628.1| pentatricopeptide repeat-containing protein [Xeroaloysia
ovatifolia]
Length = 484
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 129/285 (45%), Gaps = 34/285 (11%)
Query: 73 FRWIEE--ILEHQKQYK---------------------DISKEGFT------ARLIALYG 103
FRW+E + EH ++ D+ K+G +I YG
Sbjct: 32 FRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVLMIDSYG 91
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
KA + + + K+F +M E+T S++ L + +F F + + GIEP
Sbjct: 92 KAGIVQESVKLFQKMEELGVERTTKSYDTLFKVILRRGRFMMAKRYFNKMLSE-GIEPTR 150
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
++N +I F G +++AN +M+ + I D+IT+NT++ G+Y + +AEK +
Sbjct: 151 HTFNVMIWGFFLSGKVETANRFFDDMKSREISPDVITYNTMINGYYRVKKMDEAEKYFVE 210
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M N+ P V +Y + G Q AL LV EM+ I P+ T+ L+ G N
Sbjct: 211 MKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYSTLLPGLCNAEK 270
Query: 284 LEEA----KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCK 324
+ EA K +K + +IF L+ C+ G+LD A ++ K
Sbjct: 271 MSEARSVLKEMVDKYIAPTDNSIFMRLISGQCKTGNLDAAADVLK 315
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 104/246 (42%), Gaps = 47/246 (19%)
Query: 87 KDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
++IS + T +I Y + + A K F EM GRN E TV+++ L+ V+ + D+
Sbjct: 179 REISPDVITYNTMINGYYRVKKMDEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDD 238
Query: 146 VDGLFKDLPHKLGIEPDLVSYNT----------------IIKAFVDK------------- 176
L +++ GI+P+ ++Y+T ++K VDK
Sbjct: 239 ALRLVEEM-KGYGIKPNAITYSTLLPGLCNAEKMSEARSVLKEMVDKYIAPTDNSIFMRL 297
Query: 177 -------GSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
G+LD+A +L M + + + + L+ F + A K+ + ++ ++
Sbjct: 298 ISGQCKTGNLDAAADVLKAMIRLSVPTEAGHYGVLIENFCKADQHDKAVKLLDKLIEKDI 357
Query: 230 --RPNV------RSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
RP +YN ++ L QT KA LV ++ + D L++G E
Sbjct: 358 ILRPQSTLHMEPSAYNPMIEYLCNNGQTAKAEALVRQLLKLGVQ-DPTALNTLVRGHSQE 416
Query: 282 GNLEEA 287
G+ + A
Sbjct: 417 GSPDSA 422
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 37 LKRLVDKFKKSSDLGRF-RTNTG-IYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGF 94
LK +VDK+ +D F R +G TG + A+ +L+ + ++ G
Sbjct: 278 LKEMVDKYIAPTDNSIFMRLISGQCKTGNLDAAAD---------VLKAMIRLSVPTEAGH 328
Query: 95 TARLIALYGKAAMFENARKVFDEM--------PGRNCEQTVLSFNALLGACVNSKKFDEV 146
LI + KA + A K+ D++ P ++N ++ N+ + +
Sbjct: 329 YGVLIENFCKADQHDKAVKLLDKLIEKDIILRPQSTLHMEPSAYNPMIEYLCNNGQTAKA 388
Query: 147 DGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLL 206
+ L + L KLG++ D + NT+++ +GS DSA LL M ++ + + +++L+
Sbjct: 389 EALVRQLL-KLGVQ-DPTALNTLVRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYDSLVQ 446
Query: 207 GFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
+ ADA+ ++M+ + P+ + + ++ L
Sbjct: 447 SYLKKNEPADAKXALDSMIENDHLPDSSLFRSVMESL 483
>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62930, chloroplastic; Flags: Precursor
gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 119/236 (50%), Gaps = 8/236 (3%)
Query: 101 LYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIE 160
L+ KA+ A + D M R C+ + ++ ++ D L K + K IE
Sbjct: 197 LHNKAS---EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM-EKGKIE 252
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
D+V Y TII A + +++ A L EM+ KGIR +++T+N+L+ + GR++DA ++
Sbjct: 253 ADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRL 312
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
M+ + PNV +++A +D E + +A +L EM + I+PD+FT+ +LI GF
Sbjct: 313 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 372
Query: 281 EGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV 333
L+EAK + C N + L+ C+ ++ L R S+R LV
Sbjct: 373 HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF-REMSQRGLV 427
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 149/296 (50%), Gaps = 13/296 (4%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRF----RWIEEILE 81
++I + N+ ++ F + + G R N Y ++ L N R+ R + +++E
Sbjct: 260 TIIDALCNYKNVNDALNLFTEMDNKG-IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE 318
Query: 82 HQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSK 141
+ ++ F+A LI + K A K++DEM R+ + + ++++L+
Sbjct: 319 RKINPNVVT---FSA-LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 374
Query: 142 KFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITF 201
+ DE +F+ + K P++V+YNT+IK F ++ L EM ++G+ + +T+
Sbjct: 375 RLDEAKHMFELMISK-DCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 433
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS 261
NTL+ G + G A+KI++ MV+ V P++ +Y+ LDGL + +KAL + ++
Sbjct: 434 NTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQK 493
Query: 262 KEINPDVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKG 314
++ PD++T+ +I+G G +E+ + + G N I+ ++ C KG
Sbjct: 494 SKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKG 549
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 145/315 (46%), Gaps = 6/315 (1%)
Query: 36 NLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIE-EILEHQKQYKDISKEGF 94
N R D + SD+ + N + T + A K + +E E L + + I + F
Sbjct: 302 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 361
Query: 95 T-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
T + LI + + A+ +F+ M ++C V+++N L+ +K+ +E LF+++
Sbjct: 362 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM 421
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
+ G+ + V+YNT+I+ G D A + +M G+ D+IT++ LL G G+
Sbjct: 422 SQR-GLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGK 480
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
A ++E + + P++ +YN ++G+ + + +L + K + P+V +
Sbjct: 481 LEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTT 540
Query: 274 LIKGFVNEGNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSER 330
+I GF +G EEA R + G N + L+ GD + L K S
Sbjct: 541 MISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCG 600
Query: 331 CLVDQAPLQLVVDRL 345
+ D + + +V++ L
Sbjct: 601 FVGDASTISMVINML 615
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 108/218 (49%), Gaps = 4/218 (1%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
++A +F EM +++ FN LL A KFD V L + + L I DL SYN
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERM-QNLRISYDLYSYN 119
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
+I F + L A +L +M K G D++T ++LL G+ R ++A + + M M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+PN ++N + GL + + +A+ L+ M ++ PD+FT+ ++ G G+++ A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 288 KRWYNKSGCGMNKA---IFKLLVPFVCEKGDLDFAFNL 322
K G +A I+ ++ +C +++ A NL
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNL 277
>gi|414591629|tpg|DAA42200.1| TPA: hypothetical protein ZEAMMB73_531547 [Zea mays]
Length = 462
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 129/276 (46%), Gaps = 17/276 (6%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI Y M + A +F+EM + V+++ ++ A K D+ F + +
Sbjct: 70 LIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQ- 128
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ PD +Y+ +I+ F GSL A L+ E+ G+RLD++ F +++ GR DA
Sbjct: 129 GVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDA 188
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALE-------------LVGEMRSKEI 264
+ I++ VN+ + P+ YN +DG + + +KAL +VGEM K I
Sbjct: 189 QNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGEMLQKGI 248
Query: 265 NPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFN 321
P + +I G G AK ++ +SG MNK + +++ + + D A
Sbjct: 249 KPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIF 308
Query: 322 LCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
L K + +D L ++ + + RVEEAK+L
Sbjct: 309 LFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDL 344
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 104/222 (46%), Gaps = 7/222 (3%)
Query: 102 YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEP 161
YGK + R VFD M + V S+ +L ++ LF DL GI P
Sbjct: 7 YGK---IKEDRDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLF-DLMLGDGIAP 62
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
D+ ++N +IKA+ + G LD A + EM G++ ++T+ T++ G+ DA + +
Sbjct: 63 DIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKF 122
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
M++ V P+ +Y+ + G KA EL+ E+ + + D+ F ++I
Sbjct: 123 NQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKL 182
Query: 282 GNLEEAKRWYNKS---GCGMNKAIFKLLVPFVCEKGDLDFAF 320
G + +A+ ++ + G + ++ +L+ C G ++ A
Sbjct: 183 GRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKAL 224
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 73/142 (51%), Gaps = 3/142 (2%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
GI+P + YN II + G A +EM + GI ++ T++ +L G + N F +A
Sbjct: 247 GIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEA 306
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+++ + MNV+ ++ + N + G+ ++ ++A +L + + P T+ +I
Sbjct: 307 IFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITN 366
Query: 278 FVNEGNLEEAKRWYNK---SGC 296
+ EG +EEA+ ++ +GC
Sbjct: 367 LIKEGLVEEAEDMFSSMQNAGC 388
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 89/204 (43%), Gaps = 12/204 (5%)
Query: 102 YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEV-DGLF---KDLPHKL 157
Y E A +VFD M E V+ G ++ ++ + DGLF + +P K+
Sbjct: 214 YCLVGKMEKALRVFDAMVSAGIEPNVVGEMLQKGIKPSTILYNIIIDGLFEAGRTVPAKV 273
Query: 158 --------GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFY 209
GI + +Y+ +++ D A L E+ +++D+IT NT++ G +
Sbjct: 274 KFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMF 333
Query: 210 SNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVF 269
R +A+ ++ ++ + P +Y+ + L E ++A ++ M++ PD
Sbjct: 334 QTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSR 393
Query: 270 TFYALIKGFVNEGNLEEAKRWYNK 293
+++ + + + A + +K
Sbjct: 394 LLNHVVRELLKKNEIVRAGAYLSK 417
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/190 (20%), Positives = 83/190 (43%), Gaps = 6/190 (3%)
Query: 106 AMFENARKV-----FDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIE 160
+FE R V F EM +++ +L ++ FDE LFK+L + ++
Sbjct: 261 GLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKEL-RAMNVK 319
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
D+++ NT+I ++ A L + + G+ +T++ ++ G +AE +
Sbjct: 320 IDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDM 379
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
+ +M N P+ R N + L + + +A + ++ + + + T L+ F +
Sbjct: 380 FSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSS 439
Query: 281 EGNLEEAKRW 290
+G E R+
Sbjct: 440 KGTCREQIRF 449
>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 908
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 127/269 (47%), Gaps = 2/269 (0%)
Query: 24 IGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQ 83
+ +I G+ K +++ + K LG N +Y + L + E +
Sbjct: 333 VSGLIEGLIKMGSIEGAFELLNKVGKLGVV-PNLFVYNSMINSLCKTGKLEEAELLFSVM 391
Query: 84 KQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKF 143
+ + LI +G+ A + A F++M TV S+N+++ K
Sbjct: 392 AERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKM 451
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT 203
+ LFK++ K G++P + +Y ++I + G + A L +EM KGI + +TF
Sbjct: 452 KMAELLFKEMVDK-GLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTA 510
Query: 204 LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
L+ G + A+A K+++ MV + + PN +YN ++G E T +A EL+ EM K
Sbjct: 511 LICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKG 570
Query: 264 INPDVFTFYALIKGFVNEGNLEEAKRWYN 292
++PD +T+ LI G + G + EAK + N
Sbjct: 571 LSPDTYTYRPLIAGLCSTGRVSEAKEFIN 599
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 130/297 (43%), Gaps = 38/297 (12%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI+ Y K + A K++ EM G+ ++F AL+ K E LF ++ +L
Sbjct: 476 LISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMV-EL 534
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
I P+ V+YN +I+ +G+ A LL EM KKG+ D T+ L+ G S GR ++A
Sbjct: 535 KILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEA 594
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKAL------------------------ 253
++ + + + R + Y A L G E + K+AL
Sbjct: 595 KEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISG 654
Query: 254 ----------ELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA-KRWYNKSGCGM--NK 300
EL+ EM K + PD + LI GF+ GNL++A + WY G G N
Sbjct: 655 ALNQNDRILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNS 714
Query: 301 AIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
+ LV + + G ++ A L KR + + +D L KE +E A +L
Sbjct: 715 VTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQL 771
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 122/291 (41%), Gaps = 43/291 (14%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPH--KLGIEPDLVS 165
FE ++ DEM + + + L+ + K ++G F+ L KLG+ P+L
Sbjct: 311 FEVGMEMMDEMIELGYVPSEAAVSGLIEGLI---KMGSIEGAFELLNKVGKLGVVPNLFV 367
Query: 166 YNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF-----------YSN--- 211
YN++I + G L+ A L M ++G+ + +T+ L+ GF Y N
Sbjct: 368 YNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMI 427
Query: 212 ---------------------GRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTK 250
G+ AE +++ MV+ ++P V +Y + + G +
Sbjct: 428 ECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVP 487
Query: 251 KALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS---GCGMNKAIFKLLV 307
KA +L EM K I P+ TF ALI G + EA + +++ N+ + +L+
Sbjct: 488 KAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLI 547
Query: 308 PFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
C +G+ AF L + D + ++ L RV EAKE +
Sbjct: 548 EGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFI 598
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 136/302 (45%), Gaps = 11/302 (3%)
Query: 77 EEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGA 136
E E K+YK S GF LI Y + + V + M V + +ALL A
Sbjct: 141 ENFFESYKKYKFSSSSGFDM-LIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNA 199
Query: 137 CVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRL 196
+KF +V LF L + G++PD Y ++K + + A ++ + E G L
Sbjct: 200 LARIRKFRQVLELFDTLVNA-GVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSL 258
Query: 197 DLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELV 256
++T+N + G + R +A ++ ++ ++ ++ +Y + GL ++ + +E++
Sbjct: 259 SIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMM 318
Query: 257 GEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSG-CGM--NKAIFKLLVPFVCEK 313
EM P LI+G + G++E A NK G G+ N ++ ++ +C+
Sbjct: 319 DEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKT 378
Query: 314 GDLDFAFNLCKRTFSERCL-VDQAPLQLVVDRLAKELRVEEA----KELVELGKTNSYCR 368
G L+ A L +ER L + +++D + +++ A +++E G + +
Sbjct: 379 GKLEEA-ELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYS 437
Query: 369 YN 370
YN
Sbjct: 438 YN 439
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 116/265 (43%), Gaps = 19/265 (7%)
Query: 66 RLANAKR-FRWIEEILEHQKQYKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNC 123
R N R F ++E+++ K +S + +T R LIA A++ +++ ++
Sbjct: 552 REGNTTRAFELLDEMIK-----KGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQ 606
Query: 124 EQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSAN 183
L + ALL + E +++ + G++ DLVSY +I G+L+ +
Sbjct: 607 RLDELCYTALLQGFCKEGRIKEALVARQEMVGR-GLQMDLVSYAVLIS-----GALNQND 660
Query: 184 TLLYE----MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNAR 239
+L+E M KG++ D + + L+ GF +G A + W M+ PN +Y A
Sbjct: 661 RILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTAL 720
Query: 240 LDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK--SGCG 297
++GL +A L M E P+ T+ + EGN+E A + +N G
Sbjct: 721 VNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQGSF 780
Query: 298 MNKAIFKLLVPFVCEKGDLDFAFNL 322
N + +L+ C+ G A L
Sbjct: 781 ANTVTYNILIRGYCQIGKFQEAAKL 805
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 58/125 (46%)
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
V+YN +I+ + G A LL M G+ D IT++T + + G A +WE
Sbjct: 784 VTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWEC 843
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M+ ++P+ +N + + + +AL+L +M + + P T+++L+
Sbjct: 844 MLQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLMVQLAQRAR 903
Query: 284 LEEAK 288
L + +
Sbjct: 904 LTQVQ 908
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 71/141 (50%), Gaps = 2/141 (1%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K ENA ++ + M + TV ++N L+ KF E L D+ +G+ PD
Sbjct: 761 KEGNMENALQLHNAMLQGSFANTV-TYNILIRGYCQIGKFQEAAKLL-DVMIGIGMVPDC 818
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
++Y+T I + +G++D+A + M ++G++ D + FN L+ NG A ++
Sbjct: 819 ITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGELDRALQLRND 878
Query: 224 MVNMNVRPNVRSYNARLDGLA 244
M+ ++P +Y++ + LA
Sbjct: 879 MMLRGLKPTQSTYHSLMVQLA 899
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 83/186 (44%), Gaps = 5/186 (2%)
Query: 110 NARKVFD---EMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSY 166
N +K F+ M G +++ AL+ + +E LFK + I P+ ++Y
Sbjct: 694 NLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAI-PNHITY 752
Query: 167 NTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVN 226
+ +G++++A L M +G + +T+N L+ G+ G+F +A K+ + M+
Sbjct: 753 GCFLDHLTKEGNMENALQLHNAM-LQGSFANTVTYNILIRGYCQIGKFQEAAKLLDVMIG 811
Query: 227 MNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEE 286
+ + P+ +Y+ + A+++ M + + PD F LI G L+
Sbjct: 812 IGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGELDR 871
Query: 287 AKRWYN 292
A + N
Sbjct: 872 ALQLRN 877
>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
and contains a RepB PF|01051 protein and multiple PPR
PF|01535 repeats [Arabidopsis thaliana]
Length = 613
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 119/236 (50%), Gaps = 8/236 (3%)
Query: 101 LYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIE 160
L+ KA+ A + D M R C+ + ++ ++ D L K + K IE
Sbjct: 181 LHNKAS---EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM-EKGKIE 236
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
D+V Y TII A + +++ A L EM+ KGIR +++T+N+L+ + GR++DA ++
Sbjct: 237 ADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRL 296
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
M+ + PNV +++A +D E + +A +L EM + I+PD+FT+ +LI GF
Sbjct: 297 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 356
Query: 281 EGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV 333
L+EAK + C N + L+ C+ ++ L R S+R LV
Sbjct: 357 HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF-REMSQRGLV 411
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 149/296 (50%), Gaps = 13/296 (4%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRF----RWIEEILE 81
++I + N+ ++ F + + G R N Y ++ L N R+ R + +++E
Sbjct: 244 TIIDALCNYKNVNDALNLFTEMDNKG-IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE 302
Query: 82 HQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSK 141
+ ++ F+A LI + K A K++DEM R+ + + ++++L+
Sbjct: 303 RKINPNVVT---FSA-LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 358
Query: 142 KFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITF 201
+ DE +F+ + K P++V+YNT+IK F ++ L EM ++G+ + +T+
Sbjct: 359 RLDEAKHMFELMISK-DCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 417
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS 261
NTL+ G + G A+KI++ MV+ V P++ +Y+ LDGL + +KAL + ++
Sbjct: 418 NTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQK 477
Query: 262 KEINPDVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKG 314
++ PD++T+ +I+G G +E+ + + G N I+ ++ C KG
Sbjct: 478 SKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKG 533
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 145/315 (46%), Gaps = 6/315 (1%)
Query: 36 NLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIE-EILEHQKQYKDISKEGF 94
N R D + SD+ + N + T + A K + +E E L + + I + F
Sbjct: 286 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 345
Query: 95 T-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
T + LI + + A+ +F+ M ++C V+++N L+ +K+ +E LF+++
Sbjct: 346 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM 405
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
+ G+ + V+YNT+I+ G D A + +M G+ D+IT++ LL G G+
Sbjct: 406 SQR-GLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGK 464
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
A ++E + + P++ +YN ++G+ + + +L + K + P+V +
Sbjct: 465 LEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTT 524
Query: 274 LIKGFVNEGNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSER 330
+I GF +G EEA R + G N + L+ GD + L K S
Sbjct: 525 MISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCG 584
Query: 331 CLVDQAPLQLVVDRL 345
+ D + + +V++ L
Sbjct: 585 FVGDASTISMVINML 599
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 108/218 (49%), Gaps = 4/218 (1%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
++A +F EM +++ FN LL A KFD V L + + L I DL SYN
Sbjct: 45 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERM-QNLRISYDLYSYN 103
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
+I F + L A +L +M K G D++T ++LL G+ R ++A + + M M
Sbjct: 104 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 163
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+PN ++N + GL + + +A+ L+ M ++ PD+FT+ ++ G G+++ A
Sbjct: 164 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 223
Query: 288 KRWYNKSGCGMNKA---IFKLLVPFVCEKGDLDFAFNL 322
K G +A I+ ++ +C +++ A NL
Sbjct: 224 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNL 261
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 82/217 (37%), Gaps = 38/217 (17%)
Query: 179 LDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNA 238
LD A L EM + ++ FN LL +F + E M N+ + ++ SYN
Sbjct: 45 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 104
Query: 239 RLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR--------- 289
++ Q AL ++G+M PD+ T +L+ G+ + + EA
Sbjct: 105 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 164
Query: 290 ----------------WYNKS-------------GCGMNKAIFKLLVPFVCEKGDLDFAF 320
+NK+ GC + + +V +C++GD+D A
Sbjct: 165 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 224
Query: 321 NLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
+L K+ + D ++D L V +A L
Sbjct: 225 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNL 261
>gi|410109875|gb|AFV61017.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
herrerae]
Length = 395
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 134/273 (49%), Gaps = 26/273 (9%)
Query: 66 RLANAKRFRWI-----EEILEHQKQ----------YKDISKEGFTARL------IALYGK 104
RL +F W+ ++LEH + YK+I + G+ A L + + K
Sbjct: 77 RLTREHKF-WVPLDXCRKVLEHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCK 135
Query: 105 AAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLV 164
A+ VFD + +V+SFN L+ + DE L K+ H G++PD+
Sbjct: 136 EGDIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRL-KNAMHASGVQPDVY 194
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
+Y+ +I + +D AN L EM KG+ + +TF TL+ G NGR A +I++ M
Sbjct: 195 TYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 254
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
++ ++ P++ +YN GL + K+A +L+ EM K + PD T+ LI G EG++
Sbjct: 255 LSQSLSPDLITYNTLTYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDM 314
Query: 285 E---EAKRWYNKSGCGMNKAIFKLLVPFVCEKG 314
E E ++ + ++ ++ L+ +C++G
Sbjct: 315 ETAFEHQKRMIQENIRLDDVVYTALISGLCQEG 347
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 79/163 (48%), Gaps = 1/163 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K + A +++ +M ++ ++++N L + L ++ K
Sbjct: 234 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLTYGLCKKGDLKQAHDLIDEMSMK- 292
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD ++Y T+I +G +++A M ++ IRLD + + L+ G GR DA
Sbjct: 293 GLKPDKITYTTLIDGCCKEGDMETAFEHQKRMIQENIRLDDVVYTALISGLCQEGRSVDA 352
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMR 260
EK+ M+++ ++PN +Y ++ + +L+ EM+
Sbjct: 353 EKMLREMLSVGLKPNXGTYTMIINEFCKKGDVWTGSKLLKEMQ 395
>gi|125524099|gb|EAY72213.1| hypothetical protein OsI_00065 [Oryza sativa Indica Group]
Length = 423
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 154/336 (45%), Gaps = 21/336 (6%)
Query: 40 LVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISK--EGFTAR 97
L D F F + I+T +V RLA+A R + IL EGF R
Sbjct: 61 LADLFISGLSHPAFLADRPIFTLSVHRLASAGRRDLVASILSSSLTSLPAPHPSEGFLIR 120
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI+LY A M +++ F + + + +ALL A +++ +D F+ LP +L
Sbjct: 121 LISLYSAAGMPDHSLSTFRIV----TPPSDRALSALLSAYHDNRLYDRAIQAFRTLPAEL 176
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKG-IRLDLITFNTLLLGFYSNGRFAD 216
GI+P +VS+N ++K+FV G L SA L EM K + D+++ N +L G+ + +A
Sbjct: 177 GIKPSVVSHNVLLKSFVASGDLASARALFDEMPSKADVEPDIVSCNEILKGYLNAADYAA 236
Query: 217 AEKIWETMVNM-----NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTF 271
++ + ++PNV +YN R+ L + ++ +A EL+ M +K + P+ +F
Sbjct: 237 FDQFLKDNTTAAGGKRRLKPNVSTYNLRMASLCSKGRSFEAAELLDAMEAKGVPPNRGSF 296
Query: 272 YALIKGFVNEGNLEEAKRWY---------NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
+I+G EG + A + N G N + +L+ + KG A +
Sbjct: 297 NTVIQGLCKEGEVGAAVAIFKRMPEVPRPNGKGVLPNSETYIMLLEGLVNKGVFAPALEV 356
Query: 323 CKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
K + +Q ++ L K + + AKE+
Sbjct: 357 FKECLQNKWAPPFQAVQGLIKGLLKSRKAKHAKEVA 392
>gi|255660900|gb|ACU25619.1| pentatricopeptide repeat-containing protein [Glandularia incisa]
Length = 481
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 128/285 (44%), Gaps = 34/285 (11%)
Query: 73 FRWIEE--ILEHQKQYK---------------------DISKEGFT------ARLIALYG 103
FRW+E + EH ++ D+ K+G +I YG
Sbjct: 32 FRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYG 91
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K + + + K+F +M E+T+ S+NAL + ++ F + + GIEP
Sbjct: 92 KZGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSE-GIEPTR 150
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
++N +I F G +++AN +M+ + I D++T+NT + G+Y + +AEK +
Sbjct: 151 HTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTXINGYYRVKKMEEAEKYFVE 210
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M N+ P V +Y + G Q AL LV EM+ I P+ T+ L+ G N
Sbjct: 211 MKGRNIEPTVVTYTTLIKGYVSVDQVDXALRLVEEMKGFGIKPNAITYSTLLPGLCNAEK 270
Query: 284 LEEA----KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCK 324
+ EA K +K + +IF L+ C G+LD A ++ K
Sbjct: 271 MSEARVILKEMMDKYLAPTDNSIFMRLISSHCXSGNLDAAADVLK 315
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 96/230 (41%), Gaps = 46/230 (20%)
Query: 102 YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEP 161
Y + E A K F EM GRN E TV+++ L+ V+ + D L +++ GI+P
Sbjct: 195 YYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDXALRLVEEM-KGFGIKP 253
Query: 162 DLVSYNT----------------IIKAFVDK--------------------GSLDSANTL 185
+ ++Y+T I+K +DK G+LD+A +
Sbjct: 254 NAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCXSGNLDAAADV 313
Query: 186 LYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV--RPNV------RSYN 237
L M + + + + L+ F G++ A K+ + ++ ++ RP +YN
Sbjct: 314 LKAMXRLSVPTEAGHYGVLIENFCKXGQYDKAVKLLDKLIEKDIILRPQSTLHLEPSAYN 373
Query: 238 ARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
++ L Q KA LV ++ + D LI+G EG+ + A
Sbjct: 374 PXIEYLCNNGQAXKAETLVRQLMKLGVQ-DPTALNTLIRGHSQEGSPDSA 422
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 40/204 (19%), Positives = 87/204 (42%), Gaps = 17/204 (8%)
Query: 37 LKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTA 96
LK ++DK+ +D I+ + + ++L+ + ++ G
Sbjct: 278 LKEMMDKYLAPTD-------NSIFMRLISSHCXSGNLDAAADVLKAMXRLSVPTEAGHYG 330
Query: 97 RLIALYGKAAMFENARKVFDEM--------PGRNCEQTVLSFNALLGACVNSKKFDEVDG 148
LI + K ++ A K+ D++ P ++N + N+ + + +
Sbjct: 331 VLIENFCKXGQYDKAVKLLDKLIEKDIILRPQSTLHLEPSAYNPXIEYLCNNGQAXKAET 390
Query: 149 LFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
L + L KLG++ D + NT+I+ +GS DSA LL M ++ + + +N+L+ +
Sbjct: 391 LVRQL-MKLGVQ-DPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYNSLVQSY 448
Query: 209 YSNGRFADAEKIWETMVNMNVRPN 232
DA+ ++M+ + P+
Sbjct: 449 LKKNEPXDAKAALDSMIENDHLPD 472
Score = 38.9 bits (89), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 96/248 (38%), Gaps = 17/248 (6%)
Query: 39 RLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEIL-EHQKQYKDISKEGFTAR 97
RLV++ K + N Y+ + L NA++ IL E +Y + R
Sbjct: 241 RLVEEMKGFG----IKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMR 296
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHK- 156
LI+ + + + A V M + + L+ ++D+ L L K
Sbjct: 297 LISSHCXSGNLDAAADVLKAMXRLSVPTEAGHYGVLIENFCKXGQYDKAVKLLDKLIEKD 356
Query: 157 --------LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
L +EP +YN I+ + G A TL+ ++ K G++ D NTL+ G
Sbjct: 357 IILRPQSTLHLEPS--AYNPXIEYLCNNGQAXKAETLVRQLMKLGVQ-DPTALNTLIRGH 413
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDV 268
G A ++ + M+ V +YN+ + + + A + M + PD
Sbjct: 414 SQEGSPDSAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPXDAKAALDSMIENDHLPDS 473
Query: 269 FTFYALIK 276
F ++++
Sbjct: 474 SLFRSVME 481
>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
sativus]
Length = 686
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 148/307 (48%), Gaps = 20/307 (6%)
Query: 74 RW--IEEILEHQKQYKDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSF 130
RW E++L+ + K I+ + T + LI + K F A +++DEM R+ + +++
Sbjct: 303 RWSDAEQLLQEMLERK-INPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTY 361
Query: 131 NALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEME 190
++++ + D + +F P K G PD++++NT+I + +D LL+EM
Sbjct: 362 SSMIDGFCKQNRLDAAEHMFYLTPTK-GCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMT 420
Query: 191 KKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTK 250
+ G+ + IT+ TL+ GF G A+ + + M++ V PNV + N LDGL + K
Sbjct: 421 EAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLK 480
Query: 251 KALELVGEMRSKEIN-----------PDVFTFYALIKGFVNEGNLEEAKRWYNK---SGC 296
ALE+ M+ +++ PDV T+ LI G +NEG EA+ Y + G
Sbjct: 481 DALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGI 540
Query: 297 GMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKE 356
+ + ++ +C++ LD A + S+ D ++ K V++ E
Sbjct: 541 VPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLE 600
Query: 357 L-VELGK 362
L E+G+
Sbjct: 601 LFCEMGQ 607
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 125/277 (45%), Gaps = 15/277 (5%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMP 119
++ + +F EE+ + I + +I + K + A +F P
Sbjct: 326 FSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTP 385
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL 179
+ C +++FN L+ +K+ D+ L ++ G+ + ++Y T+I F G L
Sbjct: 386 TKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEA-GLVANTITYTTLIHGFCQVGDL 444
Query: 180 DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM-----------N 228
++A LL EM G+ +++T NTLL G NG+ DA ++++ M
Sbjct: 445 NAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNG 504
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
V P+V++YN + GL E + +A EL EM + I PD T+ ++I G + L+EA
Sbjct: 505 VEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEAT 564
Query: 289 RWYNKSGC---GMNKAIFKLLVPFVCEKGDLDFAFNL 322
+ ++ G + F L+ C+ G +D L
Sbjct: 565 QMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLEL 601
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 142/291 (48%), Gaps = 29/291 (9%)
Query: 86 YKDISKEGFTARLIA----LYGKAA--MFENARKVFDEMPGRNCEQTVLSFNALL-GACV 138
+ I+K GF ++ L+G A +F +M C+ V++F L+ G C
Sbjct: 139 FGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQM----CKPNVVTFTTLMNGLCR 194
Query: 139 NSKKFDEV---DGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEK-KGI 194
+ + V D + +D G++P+ ++Y TI+ G SA LL +ME+ I
Sbjct: 195 EGRVVEAVALLDRMLED-----GLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHI 249
Query: 195 RLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALE 254
+++ +NT++ G + +GR +DA ++ M + P++ +YN ++G I + A +
Sbjct: 250 IPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQ 309
Query: 255 LVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKAIFKLLVPF----- 309
L+ EM ++INPDV TF ALI FV EG EA+ Y++ + ++I V +
Sbjct: 310 LLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEM---LPRSIIPSTVTYSSMID 366
Query: 310 -VCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
C++ LD A ++ T ++ C D ++ + RV++ +L+
Sbjct: 367 GFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLH 417
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 118/279 (42%), Gaps = 25/279 (8%)
Query: 26 SVIRGIYKENNLKRLVDKF------KKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEI 79
S+I G K+N L F S D+ F T Y AKR ++
Sbjct: 363 SMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGY-------CRAKRVDDGIKL 415
Query: 80 LEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACV 138
L + ++ LI + + A+ + EM V++ N LL G C
Sbjct: 416 LHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCD 475
Query: 139 NSKKFDEVDGLFKDLPHKL----------GIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
N K D ++ +FK + G+EPD+ +YN +I +++G A L E
Sbjct: 476 NGKLKDALE-MFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEE 534
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
M +GI D IT+++++ G R +A +++++M + + P+V ++N + G
Sbjct: 535 MPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGM 594
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
LEL EM + I D T+ LI GF N++ A
Sbjct: 595 VDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGA 633
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 80/153 (52%), Gaps = 1/153 (0%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
F A ++++EMP R +++++++ + DE +F + K PD+V++N
Sbjct: 525 FLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK-SFSPDVVTFN 583
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
T+I + G +D L EM ++GI D IT+ TL+ GF A I++ M++
Sbjct: 584 TLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISS 643
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMR 260
V P+ + L GL +++ ++A+ ++ +++
Sbjct: 644 GVYPDTITIRNMLTGLWSKEELERAVAMLEDLQ 676
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 105/241 (43%), Gaps = 9/241 (3%)
Query: 50 LGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGF---TARLIALYGKAA 106
L R R +G Y+ A R I + L + + + + GF + +L + + +
Sbjct: 2 LARVR-RSGSYSSPAVSAARLFCTRSIRDTLAKKSRDGESDEAGFGGESLKLQSGFHEIK 60
Query: 107 MFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSY 166
++A +F M +V+ F L+G V + D V L K + L + + S+
Sbjct: 61 GLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKM-EMLRMPCNAYSF 119
Query: 167 NTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVN 226
++K F L A + ++ K G ++TFNTLL G R ++A ++ M
Sbjct: 120 TILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQM-- 177
Query: 227 MNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEE 286
+PNV ++ ++GL E + +A+ L+ M + P+ T+ ++ G G+
Sbjct: 178 --CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVS 235
Query: 287 A 287
A
Sbjct: 236 A 236
>gi|115450015|ref|NP_001048609.1| Os02g0829800 [Oryza sativa Japonica Group]
gi|48716331|dbj|BAD22943.1| membrane-associated salt-inducible protein-like [Oryza sativa
Japonica Group]
gi|113538140|dbj|BAF10523.1| Os02g0829800 [Oryza sativa Japonica Group]
gi|125584252|gb|EAZ25183.1| hypothetical protein OsJ_08983 [Oryza sativa Japonica Group]
gi|215769058|dbj|BAH01287.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 423
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 154/336 (45%), Gaps = 21/336 (6%)
Query: 40 LVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISK--EGFTAR 97
L D F F + I+T +V RLA+A R + IL EGF R
Sbjct: 61 LADLFISGLSHPAFLADRPIFTLSVHRLASAGRRDLVASILSSSLTSLPAPHPSEGFLIR 120
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI+LY A M +++ F + + + +ALL A +++ +D F+ LP +L
Sbjct: 121 LISLYSAAGMPDHSLSTFRIV----TPPSDRALSALLSAYHDNRLYDRAIQAFRTLPAEL 176
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKG-IRLDLITFNTLLLGFYSNGRFAD 216
GI+P +VS+N ++K+FV G L SA L EM K + D+++ N +L G+ + +A
Sbjct: 177 GIKPSVVSHNVLLKSFVASGDLASARALFDEMPSKADVEPDIVSCNEILKGYLNAADYAA 236
Query: 217 AEKIWETMVNM-----NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTF 271
++ + ++PNV +YN R+ L + ++ +A EL+ M +K + P+ +F
Sbjct: 237 FDQFLKDNTTAAGGKRRLKPNVSTYNLRMASLCSKGRSFEAAELLDAMEAKGVPPNRGSF 296
Query: 272 YALIKGFVNEGNLEEAKRWY---------NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
+I+G EG + A + N G N + +L+ + KG A +
Sbjct: 297 NTVIQGLCKEGEVGAAVAIFKRMPEVPRPNGKGVLPNSETYIMLLEGLVNKGVFAPALEV 356
Query: 323 CKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
K + +Q ++ L K + + AKE+
Sbjct: 357 FKECLQNKWAPPFQAVQGLIKGLLKSRKAKHAKEVA 392
>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 132/264 (50%), Gaps = 6/264 (2%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGR--FRTNTGIYTGTVQRLANAKRFRWIEEILEHQ 83
++I + K + +D FK ++GR R N YT V L N+ R+ +L
Sbjct: 195 AIIDSLCKTRRVNDALDFFK---EIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDM 251
Query: 84 KQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKF 143
+ K + L+ + K A+++F+EM + + ++++++L+ +
Sbjct: 252 IKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRI 311
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT 203
DE + +F DL G PD+VSYNT+I F ++ L +M ++G+ + +T+NT
Sbjct: 312 DEANQMF-DLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNT 370
Query: 204 LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
L+ GF+ G A++ + M + V P++ +YN L GL +KAL + +M+ E
Sbjct: 371 LIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSE 430
Query: 264 INPDVFTFYALIKGFVNEGNLEEA 287
++ D+ T+ +I+G G +E+A
Sbjct: 431 MDLDIVTYTTVIQGMCKTGKVEDA 454
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 94/182 (51%), Gaps = 1/182 (0%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
+A +F EM +++ FN LL A V KK+D V L K + LGI DL ++N
Sbjct: 66 LHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKM-EVLGIRNDLYTFN 124
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
+I F + A ++L +M K G D +T +L+ GF R +DA + + MV +
Sbjct: 125 IVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
RP++ +YNA +D L ++ AL+ E+ K I P+V T+ AL+ G N G +A
Sbjct: 185 GYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDA 244
Query: 288 KR 289
R
Sbjct: 245 AR 246
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/334 (20%), Positives = 157/334 (47%), Gaps = 40/334 (11%)
Query: 24 IGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQ 83
IGS++ G + N + V K ++G +R + Y + L +R + + L+
Sbjct: 158 IGSLVNGFCRRNRVSDAVSLVDKMVEIG-YRPDIVAYNAIIDSLCKTRR---VNDALDF- 212
Query: 84 KQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKF 143
+K+I ++G V+++ AL+ NS ++
Sbjct: 213 --FKEIGRKGI-----------------------------RPNVVTYTALVNGLCNSGRW 241
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT 203
++ L +D+ + I P++++Y+ ++ AFV G + A + EM + I D++T+++
Sbjct: 242 NDAARLLRDMIKR-KITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSS 300
Query: 204 LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
L+ G + R +A ++++ MV+ P+V SYN ++G K+ + ++L +M +
Sbjct: 301 LINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRG 360
Query: 264 INPDVFTFYALIKGFVNEGNLEEAKRWYNKS---GCGMNKAIFKLLVPFVCEKGDLDFAF 320
+ + T+ LI+GF G++++A+ ++++ G + + +L+ +C+ G L+ A
Sbjct: 361 LVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKAL 420
Query: 321 NLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA 354
+ + +D V+ + K +VE+A
Sbjct: 421 VIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDA 454
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 91/186 (48%), Gaps = 1/186 (0%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
+ A ++FD M + C V+S+N L+ +K+ ++ LF+ + + G+ + V+YN
Sbjct: 311 IDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQR-GLVNNTVTYN 369
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
T+I+ F G +D A +M+ G+ D+ T+N LL G NG A I+E M
Sbjct: 370 TLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKS 429
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+ ++ +Y + G+ + + A L + K + PD+ T+ ++ G +G E
Sbjct: 430 EMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEV 489
Query: 288 KRWYNK 293
+ Y K
Sbjct: 490 EALYTK 495
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 74/170 (43%), Gaps = 4/170 (2%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I G K ++ + F+K S G NT Y +Q +E
Sbjct: 335 TLINGFCKAKRVEDGMKLFRKMSQRG-LVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDS 393
Query: 86 YKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
+ +S + +T L+ + E A +F++M + ++++ ++ + K +
Sbjct: 394 F-GVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVE 452
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGI 194
+ GLF L K G++PD+V+Y T++ KG L +M+++G+
Sbjct: 453 DAWGLFCSLSLK-GLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGL 501
>gi|326527465|dbj|BAK08007.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 363
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 140/302 (46%), Gaps = 21/302 (6%)
Query: 44 FKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYG 103
F+K+ ++ + +Y + RLA A+RF +EE+L + + + F RLI +YG
Sbjct: 58 FRKACARRDYKPSEALYGLMIDRLAGARRFGDVEELLARARAERFRFSDDFFYRLIKMYG 117
Query: 104 KAAMF-ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPD 162
A E A + M C + +FN +L V ++++ V ++ P +LG+E D
Sbjct: 118 NVANHPEKAMETLYAMSEYGCWPSTKTFNYVLHMLVCRRQYEVVHEVYSSAP-RLGVELD 176
Query: 163 LVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWE 222
+N +IK G + A +LL EM K+ R + +T++TL+ N R +A +++E
Sbjct: 177 TCCFNILIKGLCQFGRFNEALSLLDEMPKQDCRPNAMTYSTLMHFLCRNCRVDEAFELFE 236
Query: 223 TMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEG 282
M + + YN + GL E + A +L M S+ +P+ T+ L+ G V
Sbjct: 237 RMRKEEIDADTVVYNILVSGLCREGRVTSAYDLFKSMSSQGCHPNSGTYQVLLDGLVASK 296
Query: 283 NLEEAKRWYNKSGCGMNKA--------IFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
N EAK GM A +KLL+ C LD A ++ K+ +VD
Sbjct: 297 NFVEAKDLV-----GMMSAESLRPSFSSYKLLIDGFCSVNCLDDAHHVLKQ------MVD 345
Query: 335 QA 336
Q
Sbjct: 346 QG 347
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 78/168 (46%), Gaps = 1/168 (0%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
F A + DEMP ++C ++++ L+ + + DE LF+ + K I+ D V YN
Sbjct: 193 FNEALSLLDEMPKQDCRPNAMTYSTLMHFLCRNCRVDEAFELFERM-RKEEIDADTVVYN 251
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
++ +G + SA L M +G + T+ LL G ++ F +A+ + M
Sbjct: 252 ILVSGLCREGRVTSAYDLFKSMSSQGCHPNSGTYQVLLDGLVASKNFVEAKDLVGMMSAE 311
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
++RP+ SY +DG A ++ +M + P + T+ L+
Sbjct: 312 SLRPSFSSYKLLIDGFCSVNCLDDAHHVLKQMVDQGFVPRMSTWTKLL 359
>gi|242051246|ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
gi|241926744|gb|EER99888.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
Length = 543
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 140/311 (45%), Gaps = 6/311 (1%)
Query: 51 GRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFT-ARLIALYGKAAMFE 109
G G YT V L+ A +E +++ K K+++ + + +I Y +A
Sbjct: 196 GGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKA-KNVAGDVYLYTAVINAYCRAGNVR 254
Query: 110 NARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTI 169
A +VFDE G E ++ L+ + + + L D+ + G+ + + +NT+
Sbjct: 255 RASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGR-GVGHNQIIFNTM 313
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
I + +G +D+A + MEK GI LD+ T+NTL G R A+A+ + M+ V
Sbjct: 314 IDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGV 373
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
PN +Y + E +A L EM K P V T+ ++ G++ +G++ EA+R
Sbjct: 374 PPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAER 433
Query: 290 W---YNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLA 346
+ K G + + LV C G +D A L + + ++ LA
Sbjct: 434 FRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLA 493
Query: 347 KELRVEEAKEL 357
KE R EEA +L
Sbjct: 494 KEGRSEEAFQL 504
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 101/213 (47%), Gaps = 4/213 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I Y + M +NA KV M E V ++N L + E L + K
Sbjct: 313 MIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEK- 371
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ P+ V+Y T+I +G + A L EM KG ++T+N ++ G+ G +A
Sbjct: 372 GVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREA 431
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
E+ + M + P+V +Y + + G + + AL+L EM+ + P+V + ALI G
Sbjct: 432 ERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISG 491
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLV 307
EG EEA + Y+ K+G + +++ LV
Sbjct: 492 LAKEGRSEEAFQLYDDMLKAGLTPDDSLYSALV 524
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 84/173 (48%), Gaps = 6/173 (3%)
Query: 153 LPHKLGIEPDLVS---YNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFY 209
L LG P VS + ++ F G +D A LL EM + G+RL+ + +N+LL +
Sbjct: 119 LTRALGSCPGSVSPLAASVVVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYV 178
Query: 210 SNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVF 269
A +++ E M N + V +Y +D L+ K +V EM++K + DV+
Sbjct: 179 RRKDDARVQELLEIMENGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVY 238
Query: 270 TFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFA 319
+ A+I + GN+ A +++ +G N+ + +L+ C+ G ++ A
Sbjct: 239 LYTAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAA 291
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 91/206 (44%), Gaps = 6/206 (2%)
Query: 122 NCEQTV--LSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL 179
+C +V L+ + ++ S + D+ L ++P + G+ + + YN+++ +V +
Sbjct: 125 SCPGSVSPLAASVVVDGFCKSGRVDDARALLDEMP-RHGVRLNALCYNSLLDCYVRRKDD 183
Query: 180 DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNAR 239
LL ME GI + T+ L+ + G + E + + M NV +V Y A
Sbjct: 184 ARVQELLEIMENGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAV 243
Query: 240 LDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW---YNKSGC 296
++ ++A E+ E I P+ T+ LI GF G +E A+ G
Sbjct: 244 INAYCRAGNVRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGV 303
Query: 297 GMNKAIFKLLVPFVCEKGDLDFAFNL 322
G N+ IF ++ C +G +D A +
Sbjct: 304 GHNQIIFNTMIDGYCRQGMVDNALKV 329
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 75/146 (51%), Gaps = 1/146 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI+++ K AR++F EM G+ +V+++N ++ + E + K++ K
Sbjct: 383 LISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFRKEMEKK- 441
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ PD+ +Y +++ G +D A L EM+ +G +++ + L+ G GR +A
Sbjct: 442 GLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLAKEGRSEEA 501
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGL 243
++++ M+ + P+ Y+A + L
Sbjct: 502 FQLYDDMLKAGLTPDDSLYSALVGSL 527
>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
Length = 728
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 155/336 (46%), Gaps = 53/336 (15%)
Query: 66 RLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQ 125
R+A A R R E +E+ K D+ +G + E K+ +EM GR +
Sbjct: 317 RIAEAMRLR---EEMENLKLSPDVVTYNTLINGCFEHGSS---EEGFKLIEEMEGRGMKP 370
Query: 126 TVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTL 185
+++N ++ V K DEVD + + G PD+V+YNT+I G +D A L
Sbjct: 371 NSVTYNVMVKWFVKKGKMDEVDKTVRKMEES-GCLPDIVTYNTLISWHCKVGKMDEAFRL 429
Query: 186 LYEMEKKGIRLDLITFNT-----------------------------------LLLGFYS 210
+ EM +KG+++D +T NT L++G++
Sbjct: 430 MDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFK 489
Query: 211 NGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
+ + + A ++W+ M + P++ +YN+ + GL +T +A++ + E+ + PD T
Sbjct: 490 HEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEIT 549
Query: 271 FYALIKGFVNEGNLEEAKRWYNKSGCGMNKAIFK-------LLVPFVCEKGDLDFAFNLC 323
+ +I G+ EG +E+A +++NK M + FK L+ +C++G L+ A L
Sbjct: 550 YNTIIHGYCQEGQVEKAFQFHNK----MVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLF 605
Query: 324 KRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
S+ VD ++ L KE R EA +L+E
Sbjct: 606 NTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLE 641
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 127/279 (45%), Gaps = 45/279 (16%)
Query: 129 SFNALLGACVNSKKFDE---VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTL 185
SFN L+ +F E V G +D G PD ++YNTI+ KG L+ A L
Sbjct: 199 SFNILIHGSCMENRFGEAIRVLGKMRDY----GCPPDNITYNTILDGLCKKGRLNEARDL 254
Query: 186 LYEMEKKGI---------------RL--------------------DLITFNTLLLGFYS 210
L +M+ KG+ RL D T+N ++ GF
Sbjct: 255 LLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCK 314
Query: 211 NGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
GR A+A ++ E M N+ + P+V +YN ++G +++ +L+ EM + + P+ T
Sbjct: 315 QGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVT 374
Query: 271 FYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTF 327
+ ++K FV +G ++E + K SGC + + L+ + C+ G +D AF L
Sbjct: 375 YNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMG 434
Query: 328 SERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKTNSY 366
+ +D L ++ L +E +++EA +L+ + Y
Sbjct: 435 RKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGY 473
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 107/197 (54%), Gaps = 3/197 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHK 156
LI Y K A +++DEM + +++++N+++ G C K +D L + L +
Sbjct: 483 LIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELL--E 540
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
G+ PD ++YNTII + +G ++ A +M +K + D++T NTLL G G
Sbjct: 541 SGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEK 600
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
A K++ T ++ + SYN + L EK+ +A +L+ EM K++ PD +T+ A++
Sbjct: 601 ALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILG 660
Query: 277 GFVNEGNLEEAKRWYNK 293
G + G +++A+ + +K
Sbjct: 661 GLTDAGRMKDAEEFISK 677
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 75/172 (43%), Gaps = 10/172 (5%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFR---TNTGIYTGTVQRLANAKRFRWIEEILEH 82
S+I G+ + + +DK + + G T I G Q K F++ +++E
Sbjct: 517 SMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVE- 575
Query: 83 QKQYKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSK 141
K+ + T L+ K M E A K+F+ + + +S+N ++ + K
Sbjct: 576 ----KNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEK 631
Query: 142 KFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKG 193
+F E L +++ K + PD +YN I+ D G + A + ++ +KG
Sbjct: 632 RFGEAFDLLEEMEEK-KLGPDCYTYNAILGGLTDAGRMKDAEEFISKIAEKG 682
>gi|255660894|gb|ACU25616.1| pentatricopeptide repeat-containing protein [Glandularia flava]
Length = 481
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 129/285 (45%), Gaps = 34/285 (11%)
Query: 73 FRWIEE--ILEHQKQYK---------------------DISKEGFT------ARLIALYG 103
FRW+E + EH ++ D+ K+G +I YG
Sbjct: 32 FRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYG 91
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K + + + K+F +M E+T+ S+NAL + ++ F + + GIEP
Sbjct: 92 KQGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSE-GIEPTR 150
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
++N +I F G +++ N +M+ + I D++T+NT++ G+Y + +AEK +
Sbjct: 151 HTFNVMIWGFFLSGKVETXNRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVE 210
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M N+ P V +Y + G Q AL LV EM+ I P+ T+ L+ G N
Sbjct: 211 MKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEK 270
Query: 284 LEEA----KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCK 324
+ EA K +K + +IF L+ C+ G+LD A ++ K
Sbjct: 271 MSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLK 315
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 99/234 (42%), Gaps = 46/234 (19%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I Y + E A K F EM GRN E TV+++ L+ V+ + D+ L +++
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEM-KGF 249
Query: 158 GIEPDLVSYNT----------------IIKAFVDK--------------------GSLDS 181
GI+P+ ++Y+T I+K +DK G+LD+
Sbjct: 250 GIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDA 309
Query: 182 ANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV--RPNV------ 233
A +L M + + + + L+ F G++ A K+ + ++ ++ RP
Sbjct: 310 AADVLKAMIRLSVPTEAGHYGVLIENFCKVGQYDKAVKLLDKLIEKDIILRPQSTLHLEP 369
Query: 234 RSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+YN ++ L Q KA LV ++ + D LI+G EG+ + A
Sbjct: 370 SAYNPXIEYLCNNGQAXKAETLVRQLXKLGVQ-DPTALNTLIRGXSQEGSPDSA 422
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 97/248 (39%), Gaps = 17/248 (6%)
Query: 39 RLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEIL-EHQKQYKDISKEGFTAR 97
RLV++ K + N Y+ + L NA++ IL E +Y + R
Sbjct: 241 RLVEEMKGFG----IKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMR 296
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHK- 156
LI+ + K+ + A V M + + L+ ++D+ L L K
Sbjct: 297 LISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGVLIENFCKVGQYDKAVKLLDKLIEKD 356
Query: 157 --------LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
L +EP +YN I+ + G A TL+ ++ K G++ D NTL+ G
Sbjct: 357 IILRPQSTLHLEPS--AYNPXIEYLCNNGQAXKAETLVRQLXKLGVQ-DPTALNTLIRGX 413
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDV 268
G A ++ + M+ V +YN+ + + + A + M + PD
Sbjct: 414 SQEGSPDSAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPXDAKAALDSMIENDHLPDS 473
Query: 269 FTFYALIK 276
F ++++
Sbjct: 474 XLFRSVME 481
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 40/204 (19%), Positives = 87/204 (42%), Gaps = 17/204 (8%)
Query: 37 LKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTA 96
LK ++DK+ +D I+ + + ++L+ + ++ G
Sbjct: 278 LKEMMDKYLAPTD-------NSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYG 330
Query: 97 RLIALYGKAAMFENARKVFDEM--------PGRNCEQTVLSFNALLGACVNSKKFDEVDG 148
LI + K ++ A K+ D++ P ++N + N+ + + +
Sbjct: 331 VLIENFCKVGQYDKAVKLLDKLIEKDIILRPQSTLHLEPSAYNPXIEYLCNNGQAXKAET 390
Query: 149 LFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
L + L KLG++ D + NT+I+ +GS DSA LL M ++ + + +N+L+ +
Sbjct: 391 LVRQL-XKLGVQ-DPTALNTLIRGXSQEGSPDSAFELLKIMLRRKVDSEKSAYNSLVQSY 448
Query: 209 YSNGRFADAEKIWETMVNMNVRPN 232
DA+ ++M+ + P+
Sbjct: 449 LKKNEPXDAKAALDSMIENDHLPD 472
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 155/309 (50%), Gaps = 13/309 (4%)
Query: 76 IEEILE--HQKQYKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNA 132
+EE +E +Q +D S T LI+ K E A ++ + + V +FN+
Sbjct: 367 VEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNS 426
Query: 133 LL-GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEK 191
L+ G C+ + ++ LF+++ K G PD +YN +I + +G L+ A +LL EME
Sbjct: 427 LIQGLCLTNNHRLAME-LFEEMKTK-GCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMES 484
Query: 192 KGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKK 251
G +++T+NTL+ GF N R +AE+I++ M + NV +YN +DGL ++ ++
Sbjct: 485 SGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEE 544
Query: 252 ALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK---RWYNKSGCGMNKAIFKLLVP 308
A +L+ +M + + PD FT+ +L+ F G++++A + +GC + + L+
Sbjct: 545 AAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLIL 604
Query: 309 FVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA----KELVELGKTN 364
+ + G ++ A L + + ++ V+ L +E R EA +E++E G
Sbjct: 605 GLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPP 664
Query: 365 SYCRYNLKF 373
Y + F
Sbjct: 665 DAVTYKVVF 673
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 123/266 (46%), Gaps = 6/266 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHK 156
L+ Y K E DEM +FN+L+ G C ++ L D+ +
Sbjct: 287 LVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEIL--DVMLQ 344
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
G +PD+ +YN++I G ++ A +L +M + + +T+NTL+ + +
Sbjct: 345 EGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEE 404
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
A ++ + + + P+V ++N+ + GL + + A+EL EM++K +PD FT+ LI
Sbjct: 405 ATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLID 464
Query: 277 GFVNEGNLEEA---KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV 333
+ G LEEA + SGC N + L+ C+ ++ A + +
Sbjct: 465 SLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISR 524
Query: 334 DQAPLQLVVDRLAKELRVEEAKELVE 359
+ ++D L K RVEEA +L++
Sbjct: 525 NVVTYNTLIDGLCKNRRVEEAAQLMD 550
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 98/403 (24%), Positives = 164/403 (40%), Gaps = 51/403 (12%)
Query: 8 LSCSFSTTATATG--------PKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGI 59
+S SFST + + PK + +R E+++ L+D K + F ++ I
Sbjct: 51 VSPSFSTLSPSPTTQLPQNFTPKQLRDALRRQSDEDSILDLLDWASKQPN---FVPSSVI 107
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMP 119
Y +++L F + +L+ K + G LI Y K +F+ A V D M
Sbjct: 108 YEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELFDEAVAVVDIME 167
Query: 120 GR-NCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGS 178
+ ++N LL V+ K V+ + + + GI+PD+ ++N +IKA
Sbjct: 168 EEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSR-GIKPDVTTFNILIKALCRAHQ 226
Query: 179 LDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMV------------- 225
+ A ++ EM G+ D TF TL+ GF G A +I E MV
Sbjct: 227 IRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNV 286
Query: 226 ----------------------NMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
N RP+ ++N+ ++GL K ALE++ M +
Sbjct: 287 LVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEG 346
Query: 264 INPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAF 320
+PD+FT+ +LI G G +EEA N+ N + L+ +C++ ++ A
Sbjct: 347 FDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEAT 406
Query: 321 NLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKT 363
L + S+ L D ++ L A EL E KT
Sbjct: 407 ELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKT 449
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 122/260 (46%), Gaps = 8/260 (3%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
S+I+G+ NN + ++ F++ G + Y + L + R +EE L K+
Sbjct: 426 SLIQGLCLTNNHRLAMELFEEMKTKG-CHPDEFTYNMLIDSLCSRGR---LEEALSLLKE 481
Query: 86 YKD--ISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKK 142
+ S+ T LI + K E A ++FDEM + + V+++N L+ +++
Sbjct: 482 MESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRR 541
Query: 143 FDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFN 202
+E L + + G++PD +YN+++ F G + A ++ M G D +T+
Sbjct: 542 VEEAAQLMDQMLME-GLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYG 600
Query: 203 TLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
TL+LG GR A ++ T+ + ++YN + L EK+T +A+ L EM K
Sbjct: 601 TLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEK 660
Query: 263 EINPDVFTFYALIKGFVNEG 282
PD T+ + +G + G
Sbjct: 661 GDPPDAVTYKVVFRGLCSGG 680
>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 526
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 123/233 (52%), Gaps = 3/233 (1%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIA-LYGKAAMFENARKVFDEM 118
+T + +A K+F + + +H Q +S + +T L+ + +++ A ++
Sbjct: 74 FTRLLNVIAKMKKFDVVINLCKHL-QIMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKL 132
Query: 119 PGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGS 178
E + +F +L+ + +E + + ++GI+PD+V Y TII + G
Sbjct: 133 MKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMV-EMGIKPDVVIYTTIIDSLCKNGH 191
Query: 179 LDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNA 238
+D+A +L +ME GIR D++ + +L+ G ++GR+ DA+ + M+ ++P+V ++NA
Sbjct: 192 VDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNA 251
Query: 239 RLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY 291
+D E + A EL EM I P++FT+ +LI G EG L+EA++ +
Sbjct: 252 LIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMF 304
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 135/266 (50%), Gaps = 7/266 (2%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I + K ++ + F + + G R + +YT V L N+ R+R + +L +
Sbjct: 181 TIIDSLCKNGHVDNALSLFNQMENYG-IRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMK 239
Query: 86 YKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
K I + T LI + K +A+++++EM + + ++ +L+ + D
Sbjct: 240 RK-IKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLD 298
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
E +F + K G PD+V+Y ++I F ++ A + YEM +KG+ + IT+ TL
Sbjct: 299 EARQMFYLMETK-GCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTL 357
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+ GF G+ A++++ MV+ V PN+R+YN L L + KAL + +M+ +EI
Sbjct: 358 IQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREI 417
Query: 265 N---PDVFTFYALIKGFVNEGNLEEA 287
+ P++ T+ L+ G G LE+A
Sbjct: 418 DGVPPNIRTYNVLLHGLCYNGKLEKA 443
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 96/184 (52%), Gaps = 1/184 (0%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
E A + ++M + V+ + ++ + + D LF + GI PD+V Y
Sbjct: 157 IEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQM-ENYGIRPDVVMYT 215
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
+++ + G A+ LL M K+ I+ D+ITFN L+ F G+ DA++++ M+ M
Sbjct: 216 SLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQM 275
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
++ PN+ +Y + ++GL +E + +A ++ M +K PDV + +LI GF +E+A
Sbjct: 276 SIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDA 335
Query: 288 KRWY 291
+ +
Sbjct: 336 MKIF 339
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/223 (19%), Positives = 96/223 (43%), Gaps = 4/223 (1%)
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLD 197
++S +F+E LF + + P ++ + ++ D L ++ G+ D
Sbjct: 47 LHSLQFNEALDLFSHMVESRPL-PSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSND 105
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
L T N L+ F + + A ++ + P++ ++ + ++G + + ++A+ +V
Sbjct: 106 LYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVN 165
Query: 258 EMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS---GCGMNKAIFKLLVPFVCEKG 314
+M I PDV + +I G+++ A +N+ G + ++ LV +C G
Sbjct: 166 QMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSG 225
Query: 315 DLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
A L + + D ++D KE ++ +AKEL
Sbjct: 226 RWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKEL 268
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 110/248 (44%), Gaps = 15/248 (6%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
S+I G+ E L F G F + YT + K+ + K
Sbjct: 286 SLINGLCMEGRLDEARQMFYLMETKGCF-PDVVAYTSLINGFCKCKKVE------DAMKI 338
Query: 86 YKDISKEGFTAR------LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
+ ++S++G T LI +G A++VF M R + ++N LL
Sbjct: 339 FYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCY 398
Query: 140 SKKFDEVDGLFKDLPHKL--GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLD 197
+ K ++ +F+D+ + G+ P++ +YN ++ G L+ A + +M+K+ + +
Sbjct: 399 NGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIG 458
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
+IT+ ++ G G+ DA ++ ++ + V+PNV +Y + GL E +A L
Sbjct: 459 IITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFR 518
Query: 258 EMRSKEIN 265
+M+ ++
Sbjct: 519 KMKEDGVS 526
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 156/338 (46%), Gaps = 7/338 (2%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
S++ G+ + LK ++ FK+ G + Y + L+ A ++ + L
Sbjct: 186 SLMDGLCRFGRLKEALEFFKEMEGRG-ISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVD 244
Query: 86 YKDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
+ S + FT LI K A+++ + M + E +L++N L+ + +
Sbjct: 245 -RGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLE 303
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
+ LF+ L + GI+ ++ SYN +I + +D A L EM KG++ +T+NTL
Sbjct: 304 DATKLFESLADR-GIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTL 362
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+ +GR A+K++ M + +Y LDGL ++A++L ++ E
Sbjct: 363 IGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEH 422
Query: 265 NPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFN 321
P++ F L+ G G LEEA + ++ K+G + + +L+ +C KG L A
Sbjct: 423 KPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVK 482
Query: 322 LCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
L + + CL D +++ L KE + EA +L+E
Sbjct: 483 LLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLE 520
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/376 (21%), Positives = 163/376 (43%), Gaps = 38/376 (10%)
Query: 24 IGSVIRGIYKENNLKRLVDKFKKSSDLGRF--RTNTGIY---------TGTVQRLANAKR 72
+ ++++G++ EN + V F + ++ G F GI TG +L +
Sbjct: 80 VTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAIKLHEKMK 139
Query: 73 FRWIEEILEHQKQYKDISKEGFTARLIALYGKA----------------------AMFEN 110
++ + + K+G T + ++ + +
Sbjct: 140 GNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKE 199
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A + F EM GR V ++N+L+ + + EV F +L G PD ++ +I
Sbjct: 200 ALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVT-WFLNLMVDRGFSPDAFTFTILI 258
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
+G + A +L M KG D++T+NTL+ G G+ DA K++E++ + ++
Sbjct: 259 DGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIK 318
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
NV SYN ++G +++ +A L EMR K + P T+ LI G + A++
Sbjct: 319 LNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKL 378
Query: 291 Y-NKSGCG--MNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAK 347
+ CG + + + +L+ +C+ G L+ A +L + + +++D + +
Sbjct: 379 FVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCR 438
Query: 348 ELRVEEA-KELVELGK 362
++EEA K+ E+ K
Sbjct: 439 AGKLEEAWKQFDEISK 454
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 122/267 (45%), Gaps = 12/267 (4%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A K+ ++M G NC+ V ++ ++ + E +F ++ GI PD+V Y++++
Sbjct: 131 AIKLHEKMKG-NCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGA-GILPDVVVYSSLM 188
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
G L A EME +GI D+ T+N+L+ G G + + MV+
Sbjct: 189 DGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFS 248
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
P+ ++ +DGL E + +A +++ M K PD+ T+ L+ G G LE+A +
Sbjct: 249 PDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKL 308
Query: 291 YNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAK 347
+ G +N + +L+ C+ +D AF L + + ++ L +
Sbjct: 309 FESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQ 368
Query: 348 ELRVEEAKEL-VELG------KTNSYC 367
RV A++L VE+ K ++YC
Sbjct: 369 SGRVRTAQKLFVEMQTCGQFLKLSTYC 395
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 108/226 (47%), Gaps = 16/226 (7%)
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
K G EPD V+ T++K + + A L EM +KG+ D T+ L+ G +
Sbjct: 70 KRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTG 129
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
A K+ E M N + +V +Y +D L + T +AL++ EM I PDV + +L+
Sbjct: 130 LAIKLHEKMKG-NCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLM 188
Query: 276 KGFVNEGNLEEAKRWYNK-SGCGMNKAIFKL--LVPFVCEKG---DLDFAFNL-CKRTFS 328
G G L+EA ++ + G G++ ++ L+ + G ++ + NL R FS
Sbjct: 189 DGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFS 248
Query: 329 ERCLVDQAPLQLVVDRLAKELRVEEAKELVEL----GKTNSYCRYN 370
D +++D L KE +V EA++++EL GK YN
Sbjct: 249 P----DAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYN 290
>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
Length = 699
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 148/341 (43%), Gaps = 50/341 (14%)
Query: 25 GSVIRGIYKENNLK---RLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILE 81
G +IRG +L +L+++ K S F N ++T ++ L +A R + E LE
Sbjct: 61 GILIRGFSSAGDLDIAIQLLEEMKSSG----FEGNAVVHTTLMKGLCDAGR---VVEALE 113
Query: 82 H-QKQYKDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GAC- 137
H + KD + + T L+ KA F+ A+ + EM + C ++F+ L+ G C
Sbjct: 114 HFRAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCK 173
Query: 138 -------------VNSKKFDEVDGLFKDLPHKL--------------------GIEPDLV 164
V + D F+ + +L G P ++
Sbjct: 174 FGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVL 233
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
+N +I F LDSA LL M +KG ++ TF L+ G R +A+++ E M
Sbjct: 234 MFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKM 293
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
V PNV +Y+ ++GL + Q A EL M + P+V T LI G +
Sbjct: 294 VMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRI 353
Query: 285 EEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
EEA++ Y++ +GC + + L+ +C+ +D AF L
Sbjct: 354 EEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQL 394
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 119/299 (39%), Gaps = 41/299 (13%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + A + A ++ +EM E + L+ ++ + E F+ +
Sbjct: 63 LIRGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAKDC 122
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
PD+++Y ++ A G D A +L EM +G D +TF+TL+ G G A
Sbjct: 123 A--PDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQA 180
Query: 218 EKIWETMVNMNV------------------------------------RPNVRSYNARLD 241
++ E ++ + P V +N ++
Sbjct: 181 FRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVIN 240
Query: 242 GLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGM 298
G K A +L+ M K P+VFTF LI G + EA++ K GC
Sbjct: 241 GFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSP 300
Query: 299 NKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
N + ++ +C++G +D A+ L + C + +++D L K R+EEA++L
Sbjct: 301 NVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQL 359
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 113/263 (42%), Gaps = 17/263 (6%)
Query: 44 FKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYK---------DISKEGF 94
F + LGR I++ V + + + ILE+ K + +++ +GF
Sbjct: 415 FHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGF 474
Query: 95 TAR---LIALYG---KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDG 148
R L A+ G + E A ++FD M R C L +N ++ + K D+
Sbjct: 475 PPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALA 534
Query: 149 LFKDLPHKLG--IEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLL 206
+ + + K P + + ++++ G D A LL++M ++G + ++N LL
Sbjct: 535 VLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLS 594
Query: 207 GFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINP 266
G R+ +A +++E MV+ P + + N + L + A ELV M P
Sbjct: 595 GLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCP 654
Query: 267 DVFTFYALIKGFVNEGNLEEAKR 289
D+ T LI G+ G + A++
Sbjct: 655 DIETCNTLIGGYCKSGRADLARK 677
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 112/274 (40%), Gaps = 41/274 (14%)
Query: 125 QTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANT 184
V S N L + E LF++ ++ + P+ +Y +I+ F G LD A
Sbjct: 20 HNVFSCNCALDMLCRLNRRQEALALFRNAMARICM-PNKFTYGILIRGFSSAGDLDIAIQ 78
Query: 185 LLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLA 244
LL EM+ G + + TL+ G GR +A + + M + P+V +Y A + L
Sbjct: 79 LLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAK-DCAPDVMTYTALVHALC 137
Query: 245 IEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKA 301
+ +A ++ EM ++ PD TF LI G G+ E+A R + G G + A
Sbjct: 138 KAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDA 197
Query: 302 IFKLLVPFVCEK------------------------------------GDLDFAFNLCKR 325
F+ ++ +C K DLD A+ L +
Sbjct: 198 AFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEV 257
Query: 326 TFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ C+ + +++ L K RV EA++L+E
Sbjct: 258 MIEKGCVPNVFTFTILITGLCKANRVGEAQQLLE 291
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 106/238 (44%), Gaps = 17/238 (7%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
KA E AR+++ M C ++++N+L+ S + DE LF+ +P +
Sbjct: 349 KAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANA 408
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
V+Y+T+ + G + A + + KG DL T+ +L+L + R + ++ E
Sbjct: 409 VTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEE 468
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGF----- 278
M + P V + +A L GL T++A++L M ++ D + +++G
Sbjct: 469 MASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASK 528
Query: 279 ------VNEGNLEEAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSER 330
V E +++ R +N S ++ LV +C+ G D A L + SER
Sbjct: 529 HDKALAVLEQVIDKRDRKFNPSSSAVDA-----LVESLCQVGKTDDAKQLLHK-MSER 580
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 102/218 (46%), Gaps = 7/218 (3%)
Query: 24 IGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANA----KRFRWIEEI 79
+ +V+ G+++ N+ +R + F + G + IY V+ +A A K +E++
Sbjct: 481 LSAVLGGLFEGNHTERAIQLFDSMAARG-CTDDALIYNLVVEGMARASKHDKALAVLEQV 539
Query: 80 LEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
++ + + + S A L+ + ++A+++ +M R V S+N LL
Sbjct: 540 IDKRDRKFNPSSSAVDA-LVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSR 598
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
+++DE +F+ + G P++ + N +I +D A L+ M K G D+
Sbjct: 599 LQRWDEATQVFEAMVSA-GPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIE 657
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYN 237
T NTL+ G+ +GR A K+ E M + PN +++
Sbjct: 658 TCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHD 695
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 128/307 (41%), Gaps = 49/307 (15%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI KA A+++ ++M C V++++ ++ + D+ LF+ L +
Sbjct: 273 LITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQ-LMERR 331
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFN--------------- 202
P++V++N +I ++ A L + M + G D+IT+N
Sbjct: 332 NCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEA 391
Query: 203 ---------------------TLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLD 241
TL G+ + GR ADA +I+ +V+ P++ +Y + +
Sbjct: 392 FQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLIL 451
Query: 242 GLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGM 298
+ + +ELV EM SK P V T A++ G + E A + ++ GC
Sbjct: 452 EYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTD 511
Query: 299 NKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQA--PLQLVVDRLAKEL----RVE 352
+ I+ L+V + D A + ++ +R D+ P VD L + L + +
Sbjct: 512 DALIYNLVVEGMARASKHDKALAVLEQVIDKR---DRKFNPSSSAVDALVESLCQVGKTD 568
Query: 353 EAKELVE 359
+AK+L+
Sbjct: 569 DAKQLLH 575
>gi|225428276|ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
[Vitis vinifera]
gi|297744485|emb|CBI37747.3| unnamed protein product [Vitis vinifera]
Length = 878
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 137/268 (51%), Gaps = 6/268 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLP--H 155
LI+ + + E A ++ + M V++FN+ + A ++ K E +F+D+
Sbjct: 227 LISSFCREGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQIDE 286
Query: 156 KLGI-EPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRF 214
+LG+ P++ ++N +++ F +G L+ A TL+ M++ G ++L ++N LLG NG+
Sbjct: 287 ELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKL 346
Query: 215 ADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYAL 274
+A+ + MV+ + PN+ S+N +DGL A ++G M S I PD T+ L
Sbjct: 347 LEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTL 406
Query: 275 IKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERC 331
+ G + G + +A + + GC N +L+ + ++G + A L ++
Sbjct: 407 LHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSY 466
Query: 332 LVDQAPLQLVVDRLAKELRVEEAKELVE 359
+D +V+D L K +++EA E+VE
Sbjct: 467 DLDNVTCNIVIDGLCKSGKLDEAVEIVE 494
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 148/333 (44%), Gaps = 57/333 (17%)
Query: 86 YKD-----ISKEGFTARL-IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GAC- 137
YKD +S E +T L IA + FE+AR+VFD+M + C SF L+ G C
Sbjct: 139 YKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGILVRGYCR 198
Query: 138 --VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIR 195
++ + + +DG+ G++P+ V YNT+I +F +G + A L+ M + G+
Sbjct: 199 AGLSMRALELLDGM-----GSFGVQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLF 253
Query: 196 LDLITFNTLLLGFYSNGRFADAEKIWETM-VNMNV---RPNVRSYNARLDGLAIEKQTKK 251
D++TFN+ + S G+ +A +I+ M ++ + RPN+ ++N L+G E ++
Sbjct: 254 PDVVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEE 313
Query: 252 ALELV-----------------------------------GEMRSKEINPDVFTFYALIK 276
A LV EM K I P++++F ++
Sbjct: 314 AKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMD 373
Query: 277 GFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV 333
G G + +A+ SG G + + L+ C G + A N+ C
Sbjct: 374 GLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSP 433
Query: 334 DQAPLQLVVDRLAKELRVEEAKELVELGKTNSY 366
+ +++ L KE R+ EA++L++ SY
Sbjct: 434 NTYTCNILLHSLWKEGRIFEAEKLLQKMNERSY 466
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 119/244 (48%), Gaps = 7/244 (2%)
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL 179
G+ C +++++ ++ + + DE F ++ K + PD + Y+T I +F G +
Sbjct: 521 GKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGK-SLHPDSIIYDTFIHSFCKHGKI 579
Query: 180 DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNAR 239
SA +L +MEK+G L T+N+L+LG S + + + + M + PN+ +YN
Sbjct: 580 SSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNM 639
Query: 240 LDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN--KSGCG 297
+ L + K A L+ EM K I+P++ +F LIK F + K + S CG
Sbjct: 640 ISCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASDFGVVKEVFEIALSICG 699
Query: 298 MNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL--VVDRLAKELRVEEAK 355
+A++ L+ + G++ A L +RC D Q ++++L K+ +E A
Sbjct: 700 HKEALYSLMFNELLIGGEVSEAKELFDAAL-DRCF-DLGNFQYNDLIEKLCKDEMLENAS 757
Query: 356 ELVE 359
+++
Sbjct: 758 DILH 761
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/364 (22%), Positives = 148/364 (40%), Gaps = 35/364 (9%)
Query: 39 RLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISK-EGFTAR 97
R+ + +LG R N + ++ + ++E K+ ++ + E +
Sbjct: 277 RIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIW 336
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHK 156
L+ L + E A+ EM + E + SFN ++ G C N D + L
Sbjct: 337 LLGLVRNGKLLE-AQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDAR--MIMGLMIS 393
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
GI PD V+Y+T++ G + AN +L+EM ++G + T N LL + GR +
Sbjct: 394 SGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFE 453
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM----------------- 259
AEK+ + M + + + N +DGL + +A+E+V M
Sbjct: 454 AEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIG 513
Query: 260 ------RSKEINPDVFTFYALIKGFVNEGNLEEA-KRWYNKSGCGM--NKAIFKLLVPFV 310
K+ PD+ T+ +I G G L+EA K++ G + + I+ +
Sbjct: 514 LVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSF 573
Query: 311 CEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV----ELGKTNSY 366
C+ G + AF + K C ++ L + ++ E L+ E G T +
Sbjct: 574 CKHGKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNI 633
Query: 367 CRYN 370
C YN
Sbjct: 634 CTYN 637
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 99/215 (46%), Gaps = 15/215 (6%)
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
P + YN ++++ + + +DS + L +M G+ + T N L+ G +GRF DA ++
Sbjct: 114 PPVYLYNMVLESSLREDKVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREV 173
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
++ M RPN S+ + G + +ALEL+ M S + P+ + LI F
Sbjct: 174 FDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCR 233
Query: 281 EGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAP 337
EG EEA+R + G + F + +C G + A R F + + ++
Sbjct: 234 EGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEA----SRIFRDMQIDEELG 289
Query: 338 L--------QLVVDRLAKELRVEEAKELVELGKTN 364
L L+++ KE +EEAK LVE K N
Sbjct: 290 LPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRN 324
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 8/203 (3%)
Query: 127 VLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLL 186
V +N +L + + K D L+KD+ G+ P+ + N +I D G + A +
Sbjct: 116 VYLYNMVLESSLREDKVDSFSWLYKDMVVA-GVSPETYTLNLLIAGLCDSGRFEDAREVF 174
Query: 187 YEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIE 246
+M KG R + +F L+ G+ G A ++ + M + V+PN YN + E
Sbjct: 175 DKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCRE 234
Query: 247 KQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGC----GM---N 299
+ ++A LV MR + PDV TF + I + G + EA R + G+ N
Sbjct: 235 GRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPRPN 294
Query: 300 KAIFKLLVPFVCEKGDLDFAFNL 322
F L++ C++G L+ A L
Sbjct: 295 ITTFNLMLEGFCKEGMLEEAKTL 317
Score = 41.6 bits (96), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 23/212 (10%)
Query: 26 SVIRGIYKENNLKR---LVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEH 82
S+I G+ +N + L+D K+ N Y + L R + +L+
Sbjct: 603 SLILGLGSKNQIFEIYGLLDDMKEKG----ITPNICTYNNMISCLCEGGRIKDATSLLDE 658
Query: 83 QKQYKDISKEGFTARL-IALYGKAAMFENARKVFD---EMPGRNCEQTVLSFNALL-GAC 137
Q K IS + RL I + KA+ F ++VF+ + G L FN LL G
Sbjct: 659 MLQ-KGISPNISSFRLLIKAFCKASDFGVVKEVFEIALSICGHKEALYSLMFNELLIGGE 717
Query: 138 VNSKK--FDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIR 195
V+ K FD DL + YN +I+ L++A+ +L++M KG R
Sbjct: 718 VSEAKELFDAALDRCFDLGN--------FQYNDLIEKLCKDEMLENASDILHKMIDKGYR 769
Query: 196 LDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
D +F ++ G G+ DA+++ E M++M
Sbjct: 770 FDPASFMPVIDGLGKRGKKHDADELAERMMDM 801
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 129/262 (49%), Gaps = 5/262 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI Y K M + A +F E+ +N T+ S+N+L+ NS + V L ++ H
Sbjct: 341 LIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEM-HGS 399
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
PD+V+YN +I A +G + A +L M KKG++ +++T+N ++ G+ A
Sbjct: 400 AQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVA 459
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ I+ MV + P++ +YN ++G + +A+ L EMR K + PD+ ++ +LI G
Sbjct: 460 KDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDG 519
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
N G + + ++ SG + + +L+ C+ D A +L R E D
Sbjct: 520 LCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISL-FRQIVEGIWPD 578
Query: 335 QAPLQLVVDRLAKELRVEEAKE 356
+VD L K +++ A++
Sbjct: 579 FYTNHAIVDNLCKGEKLKMAED 600
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 106/207 (51%), Gaps = 3/207 (1%)
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
K ++P+LV Y+ +I G + A L ++ ++GI LD +T+N+L+ G S GR+
Sbjct: 188 KSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQ 247
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
+ ++ MV NV P+ ++N +D L E + +A ++ M + PD+ T+ AL+
Sbjct: 248 EVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALM 307
Query: 276 KGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCL 332
+G+ + N+ EA+ +N K G + + +L+ C+ +D A L K ++ +
Sbjct: 308 EGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLV 367
Query: 333 VDQAPLQLVVDRLAKELRVEEAKELVE 359
A ++D L R+ K+L++
Sbjct: 368 PTIASYNSLIDGLCNSGRISHVKKLLD 394
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 149/339 (43%), Gaps = 17/339 (5%)
Query: 25 GSVIRGIYKENNLK---RLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILE 81
G++I G+ K +K L+ + +KSS + N +Y+ + L + ++ + L
Sbjct: 164 GTLINGLSKNGQIKAALHLLQEMEKSS----VQPNLVMYSALIDGLC---KDGFVSDALG 216
Query: 82 HQKQY--KDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACV 138
Q + I + T LI ++ ++ +M N + +FN L+ A
Sbjct: 217 LCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALC 276
Query: 139 NSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL 198
+ E G+ + K G +PD+V+YN +++ + + ++ A L M K+G+ D+
Sbjct: 277 KEGRILEAQGVLA-MMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDV 335
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
+ +N L+ G+ +A +++ + N N+ P + SYN+ +DGL + +L+ E
Sbjct: 336 LNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDE 395
Query: 259 MRSKEINPDVFTFYALIKGFVNEGNLEEA---KRWYNKSGCGMNKAIFKLLVPFVCEKGD 315
M PDV T+ LI EG + EA K G N + ++ C + +
Sbjct: 396 MHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNN 455
Query: 316 LDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA 354
++ A ++ R D ++++ K V+EA
Sbjct: 456 VNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEA 494
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 133/306 (43%), Gaps = 11/306 (3%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQK---QYKDISKEGFTARLIALYGKAAMFENARKVFD 116
Y + L N+ R ++++L+ Q D+ LI K A V
Sbjct: 373 YNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNI---LIDALCKEGRILEALGVLV 429
Query: 117 EMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDK 176
M + + ++++NA++ + +F + K G+EPD+++YN +I +
Sbjct: 430 MMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMV-KSGLEPDILNYNVLINGYCKT 488
Query: 177 GSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSY 236
+D A L EM K + D+ ++N+L+ G + GR +++ + M + P+V +Y
Sbjct: 489 EMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITY 548
Query: 237 NARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL---EEAKRWYNK 293
N LD + KA+ L ++ + I PD +T +A++ L E+A +
Sbjct: 549 NILLDAFCKTQPFDKAISLFRQI-VEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLM 607
Query: 294 SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEE 353
GC N + +L+ +C+ G A L + D ++++ L + ++
Sbjct: 608 HGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDK 667
Query: 354 AKELVE 359
A++L E
Sbjct: 668 AEKLRE 673
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 113/265 (42%), Gaps = 35/265 (13%)
Query: 97 RLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHK 156
+L+ + + A +F ++ + ++ +F L+ + L + K
Sbjct: 60 KLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATI-LK 118
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
G +P+LV++NTII F G + A + +G D T+ TL+ G NG+
Sbjct: 119 SGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKA 178
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
A + + M +V+PN+ Y+A +DGL + AL L ++ + I D T+ +LI
Sbjct: 179 ALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLID 238
Query: 277 GFVNEGNLEEAKRWYNKSGCGMNKAIFKLLVPFVCEKGDL-DFAFNLCKRTFSERCLVDQ 335
G + G RW + + +LL V E D D+ FN
Sbjct: 239 GCCSVG------RW---------QEVTQLLTKMVRENVDPDDYTFN-------------- 269
Query: 336 APLQLVVDRLAKELRVEEAKELVEL 360
+++D L KE R+ EA+ ++ +
Sbjct: 270 ----ILIDALCKEGRILEAQGVLAM 290
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 88/201 (43%), Gaps = 3/201 (1%)
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
P ++ ++ A V G +A +L +++ KGI + TF L+ ++ A A +
Sbjct: 53 PPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSL 112
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
T++ +PN+ ++N ++G I KAL+ + ++ D FT+ LI G
Sbjct: 113 LATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSK 172
Query: 281 EGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAP 337
G ++ A KS N ++ L+ +C+ G + A LC + L+D
Sbjct: 173 NGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVT 232
Query: 338 LQLVVDRLAKELRVEEAKELV 358
++D R +E +L+
Sbjct: 233 YNSLIDGCCSVGRWQEVTQLL 253
Score = 41.2 bits (95), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 59/149 (39%), Gaps = 33/149 (22%)
Query: 110 NARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE--------VDGLFKD--------- 152
+ +++ DEM V+++N LL A ++ FD+ V+G++ D
Sbjct: 528 HVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPDFYTNHAIVD 587
Query: 153 --------------LPHKL--GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRL 196
L H L G P++ +Y +I A GS A LL +ME
Sbjct: 588 NLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPP 647
Query: 197 DLITFNTLLLGFYSNGRFADAEKIWETMV 225
D ITF ++ AEK+ E M+
Sbjct: 648 DAITFEIIIGVLLQRNETDKAEKLREEMI 676
>gi|255660880|gb|ACU25609.1| pentatricopeptide repeat-containing protein [Verbena bonariensis]
Length = 484
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 129/285 (45%), Gaps = 34/285 (11%)
Query: 73 FRWIEE--ILEHQKQYK---------------------DISKEGFT------ARLIALYG 103
FRW+E + EH ++ D+ K+G +I YG
Sbjct: 32 FRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYG 91
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K + + + K+F +M E+T+ S+N L + ++ F + + GIEP
Sbjct: 92 KEGIVQESVKMFQKMEELGVERTIKSYNXLFKVILRRGRYMMAKRYFNKMLSE-GIEPTR 150
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
++N +I F G +++AN +M+ + I D++T+NT++ G+Y + +AEK +
Sbjct: 151 HTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVE 210
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M N+ P V +Y + G Q AL LV EM+ I P+ T+ L+ G N
Sbjct: 211 MKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEK 270
Query: 284 LEEA----KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCK 324
+ EA K +K + +IF L+ C+ G+LD A ++ K
Sbjct: 271 MSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLK 315
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 99/234 (42%), Gaps = 46/234 (19%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I Y + E A K F EM GRN E TV+++ L+ V+ + D+ L +++
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEM-KGF 249
Query: 158 GIEPDLVSYNT----------------IIKAFVDK--------------------GSLDS 181
GI+P+ ++Y+T I+K +DK G+LD+
Sbjct: 250 GIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDA 309
Query: 182 ANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV--RPNV------ 233
A +L M + + + + L+ F G++ A K+ + ++ ++ RP
Sbjct: 310 AADVLKAMIRLSVPTEAGHYGXLIENFCKXGQYDKAVKLLDKLIEKDIILRPQSTLHLEP 369
Query: 234 RSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+YN ++ L Q KA LV ++ + D LI+G EG+ + A
Sbjct: 370 SAYNPMIEYLCNNGQAXKAETLVRQLXKLGVQ-DPTALNTLIRGHSQEGSPDSA 422
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 98/250 (39%), Gaps = 17/250 (6%)
Query: 39 RLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEIL-EHQKQYKDISKEGFTAR 97
RLV++ K + N Y+ + L NA++ IL E +Y + R
Sbjct: 241 RLVEEMKGFG----IKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMR 296
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHK- 156
LI+ + K+ + A V M + + L+ ++D+ L L K
Sbjct: 297 LISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGXLIENFCKXGQYDKAVKLLDKLIEKD 356
Query: 157 --------LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
L +EP +YN +I+ + G A TL+ ++ K G++ D NTL+ G
Sbjct: 357 IILRPQSTLHLEPS--AYNPMIEYLCNNGQAXKAETLVRQLXKLGVQ-DPTALNTLIRGH 413
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDV 268
G A ++ + M+ V +YN+ + + + A + M + PD
Sbjct: 414 SQEGSPDSAFELLKIMLRRKVBSEKSAYNSLVQSXLKKNEPXDAKAALDSMIENDHLPDS 473
Query: 269 FTFYALIKGF 278
F ++++
Sbjct: 474 ALFRSVMESL 483
Score = 41.6 bits (96), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 41/215 (19%), Positives = 92/215 (42%), Gaps = 17/215 (7%)
Query: 37 LKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTA 96
LK ++DK+ +D I+ + + ++L+ + ++ G
Sbjct: 278 LKEMMDKYLAPTD-------NSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYG 330
Query: 97 RLIALYGKAAMFENARKVFDEM--------PGRNCEQTVLSFNALLGACVNSKKFDEVDG 148
LI + K ++ A K+ D++ P ++N ++ N+ + + +
Sbjct: 331 XLIENFCKXGQYDKAVKLLDKLIEKDIILRPQSTLHLEPSAYNPMIEYLCNNGQAXKAET 390
Query: 149 LFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
L + L KLG++ D + NT+I+ +GS DSA LL M ++ + + +N+L+
Sbjct: 391 LVRQL-XKLGVQ-DPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVBSEKSAYNSLVQSX 448
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
DA+ ++M+ + P+ + + ++ L
Sbjct: 449 LKKNEPXDAKAALDSMIENDHLPDSALFRSVMESL 483
>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 142/318 (44%), Gaps = 4/318 (1%)
Query: 44 FKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYG 103
F +S L N + + L R + E+L + + E L+ Y
Sbjct: 40 FLRSMGLKGLEPNLITFNMIINGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYC 99
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K F A + EM V+++ +L+ + + + F D H G+ P+
Sbjct: 100 KEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFF-DQMHVRGLCPNE 158
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
+Y TII F +G LD A +L EM + G ++T+N L+ G GR +A + +
Sbjct: 159 RTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQD 218
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
MV V P+V SY+ + G A ++ +A ++ EM K + PD T+ +LI+G +
Sbjct: 219 MVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRR 278
Query: 284 LEEAKRWYNKS---GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL 340
L EA + + ++ + L+ C++GDL+ A +L + L D +
Sbjct: 279 LTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNV 338
Query: 341 VVDRLAKELRVEEAKELV 358
+++ L K+ R +EA+ L+
Sbjct: 339 LINGLNKQARSKEARRLL 356
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 118/248 (47%), Gaps = 4/248 (1%)
Query: 113 KVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKA 172
+ F EM C V+++N ++ K+ DE G + + K G+EP+L+++N II
Sbjct: 4 RFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLK-GLEPNLITFNMIING 62
Query: 173 FVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPN 232
G L + +L EM +KG D +T+NTL+ G+ G F A + MV + PN
Sbjct: 63 LCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPN 122
Query: 233 VRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN 292
V +Y + ++ + +A+E +M + + P+ T+ +I GF +G L+EA R N
Sbjct: 123 VVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLN 182
Query: 293 ---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKEL 349
+SG + + L+ C G ++ A L + + L D ++ A+
Sbjct: 183 EMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQ 242
Query: 350 RVEEAKEL 357
++ A ++
Sbjct: 243 ELDRAFQM 250
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 155/355 (43%), Gaps = 44/355 (12%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRF---RTNTGIYTGTVQRLANAKRFRWIEEILEH 82
S+I + K NL R ++ F + G RT T I G Q+ + +R + E+
Sbjct: 128 SLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEM--- 184
Query: 83 QKQYKDISKEGFTARLIA----LYGKAAM--FENARKVFDEMPGRNCEQTVLSFNALLGA 136
++ GF ++ + G + E A + +M G+ V+S++ ++
Sbjct: 185 -------TRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISG 237
Query: 137 CVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRL 196
+++ D + ++ K + PD V+Y+++I+ ++ L A + EM +
Sbjct: 238 FARNQELDRAFQMKVEMIGK-SVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPP 296
Query: 197 DLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELV 256
D T+ TL+ + G A + + M+ P+ +YN ++GL + ++K+A L+
Sbjct: 297 DEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLL 356
Query: 257 GEMRSKEINPDVFTF---------------YALIKGFVNEGNLEEAKRWY----NKSGCG 297
++ + P T+ AL+KGF +G ++EA + + NK+
Sbjct: 357 LKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNH-K 415
Query: 298 MNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVE 352
N+AI+ +++ C G++ A+ L + E VD P + V L K L E
Sbjct: 416 PNEAIYNVIIHGHCRIGNVLKAYKL----YKEMVHVDFVPHTVTVLALVKALFTE 466
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 116/280 (41%), Gaps = 54/280 (19%)
Query: 96 ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPH 155
+ +I+ + + + A ++ EM G++ +++++L+ ++ E +F+++
Sbjct: 232 STIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEML- 290
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLG-------- 207
+ + PD +Y T+I A+ +G L+ A L EM +KG D +T+N L+ G
Sbjct: 291 TIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSK 350
Query: 208 ---------FYSN---------------------------------GRFADAEKIWETMV 225
FY + G +A++++E+M+
Sbjct: 351 EARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMI 410
Query: 226 NMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLE 285
N N +PN YN + G KA +L EM + P T AL+K EG
Sbjct: 411 NKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGMDG 470
Query: 286 EAKRWYNK--SGCGMNKA-IFKLLVPFVCEKGDLDFAFNL 322
E C + A + K+LV ++G++D FNL
Sbjct: 471 ELNEVIGDILRSCKLTDAELSKVLVEINQKEGNMDMVFNL 510
>gi|242063722|ref|XP_002453150.1| hypothetical protein SORBIDRAFT_04g000850 [Sorghum bicolor]
gi|241932981|gb|EES06126.1| hypothetical protein SORBIDRAFT_04g000850 [Sorghum bicolor]
Length = 757
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 161/350 (46%), Gaps = 12/350 (3%)
Query: 23 FIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIE-EILE 81
+ VI G + + F+ + G FR + + V LA+ + +L+
Sbjct: 111 LVHGVISGAASAGRAELALQFFRFAYRRGGFRPDGDTFALLVPALASRRMLNHARCLVLD 170
Query: 82 HQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSK 141
+ E A LI+ YG+AA+ + A K+F MP +T LS+NA+L A +
Sbjct: 171 TMPSFSVAPDEPTLAALISAYGRAAIPQEAVKLFRMMPDLGVPRTALSYNAVLKAILCRG 230
Query: 142 KFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITF 201
+ ++ + G+ PD+ +YNT+I F +++A + EM+ G+ D+ T+
Sbjct: 231 REAMARRIYNAMIAD-GVAPDVSTYNTLIWGFGLCKKMETAVRVFGEMKGHGVTPDVTTY 289
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS 261
N LL + G A K+++ M + N SYN + G + ++A+ L EM
Sbjct: 290 NALLNAWVRTGDLESARKVFDEMTGKGIERNSVSYNVMIKGYVEGNRVEEAVALFAEMGE 349
Query: 262 KEINPDVFTFYALIKGFV-NEGNLEEAKRWYNKSG----CGMNKAIFKLLVPFVCEKGDL 316
K + TF AL+ G ++G EA++ + +K++F LV +C+ GDL
Sbjct: 350 KGLRLSEKTFAALMPGLCDDQGRAAEARKAVDDMAERRLTPKDKSVFLRLVTTLCKAGDL 409
Query: 317 DFAFNLCKRTFS-ERCLVDQAPLQLVVDRLA----KELRVEEAKELVELG 361
D A + +++ + LVD ++++ L E+ +E EL+E G
Sbjct: 410 DGALEVHRKSGQFKHVLVDPRQYGVLMEGLCAGGKSEMAIEVLDELMEKG 459
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 80/198 (40%), Gaps = 7/198 (3%)
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
+YN +I+ GS A T ++ KKG+ D FN+L+ G G A++I M
Sbjct: 473 AYNPVIEHLCSNGSTTKAETFFRQLMKKGVD-DKAAFNSLIRGHAKEGVPEAAQEILAIM 531
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
V + S+ +D + + A + M P F ++++ N+G +
Sbjct: 532 TRREVPTDPESHVLLVDSFLKKNEPADAKTALDSMMQHGHLPSPALFKSVMEALFNDGRI 591
Query: 285 EEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLV 341
+ A R + G N + ++ + +G ++ A C+ D L +
Sbjct: 592 QTASRVMKSMIEKGVTENMDMAHKILEALFTRGHVEEAIGRVNLMVENGCMPD---LDKL 648
Query: 342 VDRLAKELRVEEAKELVE 359
+ L RV EA++L +
Sbjct: 649 LVGLCDNDRVMEAQKLAD 666
Score = 38.5 bits (88), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 83/178 (46%), Gaps = 4/178 (2%)
Query: 110 NARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTI 169
+A+ D M + F +++ A N + + K + K G+ ++ + I
Sbjct: 558 DAKTALDSMMQHGHLPSPALFKSVMEALFNDGRIQTASRVMKSMIEK-GVTENMDMAHKI 616
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
++A +G ++ A + M + G DL + LL+G N R +A+K+ + ++ +
Sbjct: 617 LEALFTRGHVEEAIGRVNLMVENGCMPDL---DKLLVGLCDNDRVMEAQKLADFALDRDF 673
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+ +Y+ L+ L E++T A ++ ++++K D AL++ +EG ++A
Sbjct: 674 DVSFSTYDRVLEALYAEEKTLPAYSMLCKIKNKGGVVDQKGCDALMESLKSEGYSKQA 731
>gi|255660878|gb|ACU25608.1| pentatricopeptide repeat-containing protein [Verbena hispida]
Length = 484
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 129/285 (45%), Gaps = 34/285 (11%)
Query: 73 FRWIEE--ILEHQKQYK---------------------DISKEGFT------ARLIALYG 103
FRW+E + EH ++ D+ K+G +I YG
Sbjct: 32 FRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYG 91
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K + + + K+F +M E+T+ S+NAL + ++ F + + GIEP
Sbjct: 92 KEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSE-GIEPTR 150
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
++N +I F G +++AN +M+ + I D++T+NT++ G+Y + +AEK +
Sbjct: 151 HTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVE 210
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M N+ P V +Y + G Q L LV EM+ I P+ T+ L+ G N
Sbjct: 211 MKGRNIEPTVVTYTTLIKGYVSVDQVDDXLRLVEEMKGFGIKPNAITYSTLLPGLCNAEK 270
Query: 284 LEEA----KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCK 324
+ EA K +K + +IF L+ C+ G+LD A ++ K
Sbjct: 271 MSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLK 315
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 99/234 (42%), Gaps = 46/234 (19%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I Y + E A K F EM GRN E TV+++ L+ V+ + D+ L +++
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDXLRLVEEM-KGF 249
Query: 158 GIEPDLVSYNT----------------IIKAFVDK--------------------GSLDS 181
GI+P+ ++Y+T I+K +DK G+LD+
Sbjct: 250 GIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDA 309
Query: 182 ANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV--RPNV------ 233
A +L M + + + + L+ F G++ A K+ + ++ ++ RP
Sbjct: 310 AADVLKAMIRLSVPTEAGHYGXLIENFCKAGQYDKAVKLLDKLIEKDIILRPQSTLHLEP 369
Query: 234 RSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+YN ++ L Q KA LV ++ + D LI+G EG+ + A
Sbjct: 370 SAYNPMIEYLCNNGQAXKAETLVRQLXKLGVQ-DPTALNTLIRGHSQEGSPDSA 422
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 41/215 (19%), Positives = 92/215 (42%), Gaps = 17/215 (7%)
Query: 37 LKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTA 96
LK ++DK+ +D I+ + + ++L+ + ++ G
Sbjct: 278 LKEMMDKYLAPTD-------NSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYG 330
Query: 97 RLIALYGKAAMFENARKVFDEM--------PGRNCEQTVLSFNALLGACVNSKKFDEVDG 148
LI + KA ++ A K+ D++ P ++N ++ N+ + + +
Sbjct: 331 XLIENFCKAGQYDKAVKLLDKLIEKDIILRPQSTLHLEPSAYNPMIEYLCNNGQAXKAET 390
Query: 149 LFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
L + L KLG++ D + NT+I+ +GS DSA LL M ++ + + + +L+
Sbjct: 391 LVRQL-XKLGVQ-DPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVBSEKSAYISLVQSX 448
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
DA+ ++M+ + P+ + + ++ L
Sbjct: 449 LKKNEPXDAKAALDSMIENDHLPDSALFRSVMESL 483
>gi|255660888|gb|ACU25613.1| pentatricopeptide repeat-containing protein [Verbena rigida]
Length = 481
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 129/285 (45%), Gaps = 34/285 (11%)
Query: 73 FRWIEE--ILEHQKQYK---------------------DISKEGFT------ARLIALYG 103
FRW+E + EH ++ D+ K+G +I YG
Sbjct: 32 FRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYG 91
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K + + + K+F +M E+T+ S+N L + ++ F + + GIEP
Sbjct: 92 KEGIVQESVKMFQKMEELGVERTIKSYNXLFKVILRRGRYMMAKRYFNKMLSE-GIEPTR 150
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
++N +I F G +++AN +M+ + I D++T+NT++ G+Y + +AEK +
Sbjct: 151 HTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVE 210
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M N+ P V +Y + G Q AL LV EM+ I P+ T+ L+ G N
Sbjct: 211 MKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEK 270
Query: 284 LEEA----KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCK 324
+ EA K +K + +IF L+ C+ G+LD A ++ K
Sbjct: 271 MSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLK 315
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 99/234 (42%), Gaps = 46/234 (19%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I Y + E A K F EM GRN E TV+++ L+ V+ + D+ L +++
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMK-GF 249
Query: 158 GIEPDLVSYNT----------------IIKAFVDK--------------------GSLDS 181
GI+P+ ++Y+T I+K +DK G+LD+
Sbjct: 250 GIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDA 309
Query: 182 ANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV--RPNV------ 233
A +L M + + + + L+ F G++ A K+ + ++ ++ RP
Sbjct: 310 AADVLKAMIRLSVPTEAGHYGXLIENFCKXGQYDKAVKLLDKLIEKDIILRPQSTLHLEP 369
Query: 234 RSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+YN ++ L Q KA LV ++ + D LI+G EG+ + A
Sbjct: 370 SAYNPMIEYLCNNGQXXKAETLVRQLXKLGVQ-DXTALNTLIRGHSQEGSPDSA 422
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 40/204 (19%), Positives = 88/204 (43%), Gaps = 17/204 (8%)
Query: 37 LKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTA 96
LK ++DK+ +D I+ + + ++L+ + ++ G
Sbjct: 278 LKEMMDKYLAPTD-------NSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYG 330
Query: 97 RLIALYGKAAMFENARKVFDEM--------PGRNCEQTVLSFNALLGACVNSKKFDEVDG 148
LI + K ++ A K+ D++ P ++N ++ N+ + + +
Sbjct: 331 XLIENFCKXGQYDKAVKLLDKLIEKDIILRPQSTLHLEPSAYNPMIEYLCNNGQXXKAET 390
Query: 149 LFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
L + L KLG++ D + NT+I+ +GS DSA LL M ++ + + +N+L+ +
Sbjct: 391 LVRQL-XKLGVQ-DXTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYNSLVQSY 448
Query: 209 YSNGRFADAEKIWETMVNMNVRPN 232
DA+ ++M+ + P+
Sbjct: 449 LKKNEPXDAKAALDSMIENDHLPD 472
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 98/248 (39%), Gaps = 17/248 (6%)
Query: 39 RLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEIL-EHQKQYKDISKEGFTAR 97
RLV++ K + N Y+ + L NA++ IL E +Y + R
Sbjct: 241 RLVEEMKGFG----IKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMR 296
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHK- 156
LI+ + K+ + A V M + + L+ ++D+ L L K
Sbjct: 297 LISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGXLIENFCKXGQYDKAVKLLDKLIEKD 356
Query: 157 --------LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
L +EP +YN +I+ + G A TL+ ++ K G++ D NTL+ G
Sbjct: 357 IILRPQSTLHLEPS--AYNPMIEYLCNNGQXXKAETLVRQLXKLGVQ-DXTALNTLIRGH 413
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDV 268
G A ++ + M+ V +YN+ + + + A + M + PD
Sbjct: 414 SQEGSPDSAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPXDAKAALDSMIENDHLPDS 473
Query: 269 FTFYALIK 276
F ++++
Sbjct: 474 ALFRSVME 481
>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 121/257 (47%), Gaps = 6/257 (2%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
E A + EM G +CE ++ L+ + +E L ++ K G+E D+V Y+
Sbjct: 26 LEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRLLGEMKRK-GLEVDVVVYS 84
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
T+I F KG LD L EM +KGI +++ ++ L+ GF G + +A + TM
Sbjct: 85 TLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGLWREATAVLHTMTER 144
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
++P+V +Y + GL + + +KAL+L M K P T+ LI G EG + +A
Sbjct: 145 GIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDA 204
Query: 288 KRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV--DQAPLQLVV 342
+ + + G + + L+ +C G LD A L + V D V+
Sbjct: 205 FKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVI 264
Query: 343 DRLAKELRVEEAKELVE 359
L KE R+++A E+ +
Sbjct: 265 QGLCKEGRLDKAVEIYD 281
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 120/256 (46%), Gaps = 4/256 (1%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLG-IEPD 162
K +A K+F+ M + V+S+N L+ N+ K DE LF L +EPD
Sbjct: 197 KEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPD 256
Query: 163 LVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWE 222
++++NT+I+ +G LD A + M ++G +L T + L+ + +G A ++W+
Sbjct: 257 VITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWK 316
Query: 223 TMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEG 282
+ + + P+ +Y+ +DG A L M+ ++P +F + L+ E
Sbjct: 317 RVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKES 376
Query: 283 NLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQ 339
+LE+A+R + +S C + F +++ + GD+ A L D
Sbjct: 377 SLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYS 436
Query: 340 LVVDRLAKELRVEEAK 355
++RL+K ++EEAK
Sbjct: 437 SFINRLSKLGQMEEAK 452
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 87/189 (46%), Gaps = 1/189 (0%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K + A +++D M R + + + L+G + S D+ L+K + HKLG+ P
Sbjct: 269 KEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRV-HKLGLVPSS 327
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
+Y+ +I F L+ A L M+ G+ L +NTL+ A ++++
Sbjct: 328 TTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQE 387
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M N P+ S+N +DG A EL+ +M+ + PD +T+ + I G
Sbjct: 388 MKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQ 447
Query: 284 LEEAKRWYN 292
+EEAK ++
Sbjct: 448 MEEAKGAFD 456
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 97/205 (47%), Gaps = 38/205 (18%)
Query: 156 KLGIEPDLVSYNTIIKAF---------VD--------------------------KGSLD 180
++ I PD+VSYNTII VD +G ++
Sbjct: 3 RINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVE 62
Query: 181 SANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARL 240
A LL EM++KG+ +D++ ++TL+ GF S G + +++ M+ + PNV Y+ +
Sbjct: 63 EAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLI 122
Query: 241 DGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCG 297
+G + ++A ++ M + I PDV+T+ +I G +G +A ++ + G
Sbjct: 123 NGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEE 182
Query: 298 MNKAIFKLLVPFVCEKGDLDFAFNL 322
+ + +L+ +C++G + AF +
Sbjct: 183 PSTVTYNVLINGLCKEGCIGDAFKI 207
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 93/191 (48%), Gaps = 9/191 (4%)
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
M++ I D++++NT++ G R A + M + PN +Y +DGL E +
Sbjct: 1 MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKL 305
++A+ L+GEM+ K + DV + LI GF ++G L+ K ++ + G N ++
Sbjct: 61 VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120
Query: 306 LVPFVCEKGDLDFAFNLCKRTFSERCL-VDQAPLQLVVDRLAKELRVEEAKELVEL---- 360
L+ C+KG A + T +ER + D ++ L K+ R +A +L +L
Sbjct: 121 LINGFCKKGLWREATAVL-HTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEK 179
Query: 361 GKTNSYCRYNL 371
G+ S YN+
Sbjct: 180 GEEPSTVTYNV 190
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 117/258 (45%), Gaps = 20/258 (7%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
+VI+G+ KE L + V+ + + G F ++T + + + I++ +E
Sbjct: 262 TVIQGLCKEGRLDKAVEIYDTMIERGSFGN---LFTCHI-LIGEYIKSGIIDKAME---L 314
Query: 86 YKDISKEGFT------ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
+K + K G + +I + K M A+ +F M T+ +N L+ +
Sbjct: 315 WKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCK 374
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
++ LF+++ EPD +S+N +I + G + SA LL +M++ G+ D
Sbjct: 375 ESSLEQARRLFQEMKES-NCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAY 433
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
T+++ + G+ +A+ +++M+ + P+ Y++ + G + + ++ + L+ +M
Sbjct: 434 TYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQM 493
Query: 260 RSK------EINPDVFTF 271
EI + TF
Sbjct: 494 ADMGVILDLEITNSILTF 511
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 1/165 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+A K + E AR++F EM NCE +SFN ++ + + L D+ ++
Sbjct: 368 LMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDM-QQM 426
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ PD +Y++ I G ++ A M GI D +++L+ GF N +
Sbjct: 427 GLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEV 486
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
+ M +M V ++ N+ L L + +EL+ S+
Sbjct: 487 INLLRQMADMGVILDLEITNSILTFLCNSAEHLHVMELLPNFSSE 531
>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
Length = 737
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 138/324 (42%), Gaps = 5/324 (1%)
Query: 46 KSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKA 105
K+ G ++ Y+ + A+ F+ +L+ ++ + +I
Sbjct: 156 KNHRCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDN 215
Query: 106 AMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVS 165
++A + +M RNC +V+++ L+ A S + + + +D+ G P++V+
Sbjct: 216 GRVDSALVHYRDM-QRNCAPSVITYTILVDALCKSARISDASLILEDMIEA-GCAPNVVT 273
Query: 166 YNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMV 225
YNT+I F G++D A L +M + D+ T+N L+ G+ R D K+ + MV
Sbjct: 274 YNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMV 333
Query: 226 NMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLE 285
PN +YN +D L + A L M ++ P FTF +I F G L+
Sbjct: 334 KYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLD 393
Query: 286 EAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVV 342
A + GC + + +++ C +D A L +R C D +V
Sbjct: 394 LAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIV 453
Query: 343 DRLAKELRVEEAKELVELGKTNSY 366
L K +V+EA E+ E+ + Y
Sbjct: 454 SGLCKASQVDEAYEVYEVLRNGGY 477
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 121/292 (41%), Gaps = 41/292 (14%)
Query: 108 FENARKVFDEMPGR-NCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGI-EPDLVS 165
+ A K FD G+ + + + N LL A V KK E LFK+ H+ G+ PD ++
Sbjct: 112 LDKAVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKN--HRCGLCSPDSIT 169
Query: 166 YNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNG------------- 212
Y+T+I F A LL EMEK+GI +NT++ G NG
Sbjct: 170 YSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQ 229
Query: 213 ---------------------RFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKK 251
R +DA I E M+ PNV +YN ++G +
Sbjct: 230 RNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDE 289
Query: 252 ALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVP 308
A+ L +M +PDVFT+ LI G+ + ++ + K GC N + L+
Sbjct: 290 AVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMD 349
Query: 309 FVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVEL 360
+ + G AFNL + C L++D K +++ A EL +L
Sbjct: 350 SLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQL 401
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 123/269 (45%), Gaps = 4/269 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I+ +A ++AR++ + M C V+++N+++ + + DE +++ L +
Sbjct: 417 MISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNG- 475
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G D+V+ +T+I LD A LL EME+ G D++ + L+ GF + +
Sbjct: 476 GYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKS 535
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ M++ P V +Y+ +D L + + L+ M + + PD + ++I G
Sbjct: 536 LAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDG 595
Query: 278 FVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
+ +EA Y ++GC + +LV +C+ LD A +L + S+ CL D
Sbjct: 596 LCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPD 655
Query: 335 QAPLQLVVDRLAKELRVEEAKELVELGKT 363
V D K ++A L + K+
Sbjct: 656 TVTYNSVFDGFWKSAEHDKAFRLFQAMKS 684
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 118/262 (45%), Gaps = 4/262 (1%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K+ + +A + M R+C+ + +FN ++ + D LF+ + + G PD+
Sbjct: 353 KSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDR-GCLPDI 411
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
+YN +I +D A LL M + G D++T+N+++ G + +A +++E
Sbjct: 412 YTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEV 471
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
+ N +V + + +DGL ++ A +L+ EM PDV + LI GF
Sbjct: 472 LRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQ 531
Query: 284 LEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL 340
L+++ ++++ GC + +++ +C+ + L K D
Sbjct: 532 LDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTS 591
Query: 341 VVDRLAKELRVEEAKELVELGK 362
V+D L K +EA EL +L K
Sbjct: 592 VIDGLCKSDSYDEAYELYKLMK 613
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 119/271 (43%), Gaps = 6/271 (2%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
S++ G+ K + + + ++ + G F T + L ++R E++L +
Sbjct: 451 SIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCST-LIDGLCKSRRLDDAEKLLREME- 508
Query: 86 YKDISKEGFTARLIALYG--KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKF 143
++ S A I ++G KA + + F EM + C TV++++ ++ S +
Sbjct: 509 -RNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARV 567
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT 203
+ L K + + G+ PD + Y ++I S D A L M++ G ++T+N
Sbjct: 568 RDGCMLLKTMLER-GVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNV 626
Query: 204 LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
L+ R +A + E M + P+ +YN+ DG + KA L M+S+
Sbjct: 627 LVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRG 686
Query: 264 INPDVFTFYALIKGFVNEGNLEEAKRWYNKS 294
+P F + L+ V E +++A + ++
Sbjct: 687 CSPTPFMYSLLLTKLVAEEKMDQAMEIWEEA 717
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 112/259 (43%), Gaps = 4/259 (1%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
KA+ + A +V++ + V++ + L+ S++ D+ + L +++ + G PD+
Sbjct: 458 KASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREM-ERNGSAPDV 516
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
V+Y +I F LD + EM KG +IT++ ++ + R D + +T
Sbjct: 517 VAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKT 576
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M+ V P+ Y + +DGL +A EL M+ P V T+ L+
Sbjct: 577 MLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSR 636
Query: 284 LEEAKRW---YNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL 340
L+EA GC + + + + + D AF L + S C L
Sbjct: 637 LDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSL 696
Query: 341 VVDRLAKELRVEEAKELVE 359
++ +L E ++++A E+ E
Sbjct: 697 LLTKLVAEEKMDQAMEIWE 715
>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 618
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 122/252 (48%), Gaps = 4/252 (1%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A + D M CE +++ +L S LF+ + + I+ +V Y+ +I
Sbjct: 193 ALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEER-SIKASVVQYSIVI 251
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
+ G+LD A +L EME KGI+ D++ +++++ G ++GR+ D K+ M+ N+
Sbjct: 252 DSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNII 311
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
PNV +++A +D E + +A EL EM ++ I PD T+ +LI GF E L EA +
Sbjct: 312 PNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQM 371
Query: 291 YN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAK 347
+ GC N + +L+ C+ +D L S+ + D +V +
Sbjct: 372 LDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQ 431
Query: 348 ELRVEEAKELVE 359
++ AKEL +
Sbjct: 432 SGKLNVAKELFQ 443
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 156/336 (46%), Gaps = 5/336 (1%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
VI + K+ NL + F + G + + Y+ + L N R+ ++L
Sbjct: 250 VIDSLCKDGNLDDALSLFNEMEMKG-IKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGR 308
Query: 87 KDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEV 146
I + LI ++ K A+++++EM R +++++L+ + E
Sbjct: 309 NIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEA 368
Query: 147 DGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLL 206
+ + DL G EP++V+Y+ +I ++ +D+ L E+ KG+ D +T+NTL+
Sbjct: 369 NQML-DLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQ 427
Query: 207 GFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINP 266
GF +G+ A+++++ MV+ V P+V +Y LDGL + +KALE+ +M+ +
Sbjct: 428 GFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMIL 487
Query: 267 DVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLC 323
+ + +I G N +++A + + G + + +++ +C+KG L A L
Sbjct: 488 GIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLF 547
Query: 324 KRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
++ + C +++ V + EL+E
Sbjct: 548 RKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIE 583
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 120/285 (42%), Gaps = 39/285 (13%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A +F+ M +++ F+ L A K++D V G K++ GIE ++ + N +I
Sbjct: 53 AIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLN-GIEHNMYTMNIMI 111
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
F K L A +++ K G + ITF+TL+ GF GR ++A + + MV M R
Sbjct: 112 NCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYR 171
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVG--------------------------------- 257
PNV + N ++GL ++ + +AL L+
Sbjct: 172 PNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDL 231
Query: 258 --EMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCE 312
+M + I V + +I +GNL++A +N+ G + + ++ +C
Sbjct: 232 FRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCN 291
Query: 313 KGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
G D + + + + ++D KE ++ EAKEL
Sbjct: 292 DGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKEL 336
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 63/137 (45%), Gaps = 2/137 (1%)
Query: 78 EILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGAC 137
EI E ++ + I G +I A+ ++A +F + + + VL++N ++G
Sbjct: 475 EIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGL 534
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLD 197
E D LF+ + G P +YN +I+A + + S+ L+ EM+ +G D
Sbjct: 535 CKKGSLSEADMLFRKMKED-GCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMRGFAAD 593
Query: 198 LITFNTLLLGFYSNGRF 214
T +++ S+GR
Sbjct: 594 ASTIKMVVV-MLSDGRL 609
>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Glycine max]
Length = 725
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 141/302 (46%), Gaps = 6/302 (1%)
Query: 52 RFRTNTGIYTGTVQRLANAKRFRWIEEILEHQK-QYKDISKEGFTARLIALYGKAAMFEN 110
RF N YT + R EI+ + ++ G+ + AL K E
Sbjct: 407 RFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICAL-CKDGNIEE 465
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A ++F EM G+ C+ + +FN+L+ + K +E L+ D+ + G+ + V+YNT++
Sbjct: 466 ALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLE-GVIANTVTYNTLV 524
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
AF+ + S+ A L+ EM +G LD IT+N L+ G ++E M+ +
Sbjct: 525 HAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIF 584
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
P + S N + GL + AL+ + +M + + PD+ T+ +LI G G+++EA
Sbjct: 585 PTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNL 644
Query: 291 YNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAK 347
+NK G + + L+ C +G + A L + + ++ ++++ + K
Sbjct: 645 FNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSILINYIVK 704
Query: 348 EL 349
++
Sbjct: 705 KI 706
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 136/309 (44%), Gaps = 11/309 (3%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFT-ARLIALYGKAAMFENARKVFDEM 118
+ + L A R ++L+ + + S + T L+ + + AR + +++
Sbjct: 278 FNDVIHGLCRAGRIHEAAKLLD-RMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKI 336
Query: 119 PGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGS 178
P N TVL +N L+ V S +F+E L + G EPD ++N +I V KG
Sbjct: 337 PNPN---TVL-YNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGY 392
Query: 179 LDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNA 238
L SA LL EM K ++IT+ L+ GF GR +A +I +M + N YN
Sbjct: 393 LVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNC 452
Query: 239 RLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SG 295
+ L + ++AL+L GEM K PD++TF +LI G +EEA Y+ G
Sbjct: 453 LICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEG 512
Query: 296 CGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAK 355
N + LV + + AF L C +D ++ L K VE+
Sbjct: 513 VIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGL 572
Query: 356 ELVE--LGK 362
L E LGK
Sbjct: 573 GLFEEMLGK 581
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 148/331 (44%), Gaps = 37/331 (11%)
Query: 64 VQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPG-RN 122
+ +L F+ IE++L+ K + KE ++ YGKA + A ++ +M G +
Sbjct: 106 IDKLGAVGDFKVIEKLLKQMKDEGLLFKESLFILIMKHYGKAGLPGQATRLLLDMWGVYS 165
Query: 123 CEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSA 182
C+ T S+N +L V+ +F D+ + G+ P + ++ ++KA +DSA
Sbjct: 166 CDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSR-GVSPTVYTFGVVMKALCMVSEVDSA 224
Query: 183 NTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDG 242
+LL +M K G + + + TL+ N R ++A ++ E M M P+V+++N + G
Sbjct: 225 CSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHG 284
Query: 243 LAIEKQTKKALELVGEM-------------------------------RSKEINPDVFTF 271
L + +A +L+ M +K NP+ +
Sbjct: 285 LCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPNPNTVLY 344
Query: 272 YALIKGFVNEGNLEEAKR-WYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTF 327
LI G+V G EEAK YN +G + F +++ + +KG L A L
Sbjct: 345 NTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMV 404
Query: 328 SERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
++R + ++++ K+ R+EEA E+V
Sbjct: 405 AKRFEPNVITYTILINGFCKQGRLEEAAEIV 435
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 80/187 (42%), Gaps = 4/187 (2%)
Query: 177 GSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM-NVRPNVRS 235
G LL +M+ +G+ F ++ + G A ++ M + + P +S
Sbjct: 113 GDFKVIEKLLKQMKDEGLLFKESLFILIMKHYGKAGLPGQATRLLLDMWGVYSCDPTFKS 172
Query: 236 YNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA---KRWYN 292
YN LD L + A + +M S+ ++P V+TF ++K ++ A R
Sbjct: 173 YNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACSLLRDMA 232
Query: 293 KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVE 352
K GC N I++ L+ +CE + A L + F C D V+ L + R+
Sbjct: 233 KHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIH 292
Query: 353 EAKELVE 359
EA +L++
Sbjct: 293 EAAKLLD 299
>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62680, mitochondrial; Flags: Precursor
gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 126/252 (50%), Gaps = 3/252 (1%)
Query: 38 KRLVDKFKKSSDLGR--FRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFT 95
KR+ D F ++ R R N YT V L N+ R+ +L + K
Sbjct: 204 KRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITY 263
Query: 96 ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPH 155
+ L+ + K A+++F+EM + + ++++++L+ + DE + +F DL
Sbjct: 264 SALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMF-DLMV 322
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
G D+VSYNT+I F ++ L EM ++G+ + +T+NTL+ GF+ G
Sbjct: 323 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVD 382
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
A++ + M + P++ +YN L GL + +KAL + +M+ +E++ D+ T+ +I
Sbjct: 383 KAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVI 442
Query: 276 KGFVNEGNLEEA 287
+G G +EEA
Sbjct: 443 RGMCKTGKVEEA 454
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/352 (21%), Positives = 156/352 (44%), Gaps = 48/352 (13%)
Query: 24 IGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQ 83
IGS++ G + N + V K ++G ++ + Y + L KR
Sbjct: 158 IGSLVNGFCRRNRVSDAVSLVDKMVEIG-YKPDIVAYNAIIDSLCKTKRV---------- 206
Query: 84 KQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKF 143
+A F E+ + V+++ AL+ NS ++
Sbjct: 207 -------------------------NDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT 203
+ L D+ K I P++++Y+ ++ AFV G + A L EM + I D++T+++
Sbjct: 242 SDAARLLSDMIKK-KITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSS 300
Query: 204 LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
L+ G + R +A ++++ MV+ +V SYN ++G K+ + ++L EM +
Sbjct: 301 LINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRG 360
Query: 264 INPDVFTFYALIKGFVNEGNLEEAKRWYNKS---GCGMNKAIFKLLVPFVCEKGDLDFAF 320
+ + T+ LI+GF G++++A+ ++++ G + + +L+ +C+ G+L+ A
Sbjct: 361 LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKAL 420
Query: 321 NLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKTNSYCRYNLK 372
+ + +D V+ + K +VEEA L +C +LK
Sbjct: 421 VIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSL--------FCSLSLK 464
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 94/186 (50%), Gaps = 1/186 (0%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
+ A ++FD M + C V+S+N L+ +K+ ++ LF+++ + G+ + V+YN
Sbjct: 311 IDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQR-GLVSNTVTYN 369
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
T+I+ F G +D A +M+ GI D+ T+N LL G NG A I+E M
Sbjct: 370 TLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKR 429
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+ ++ +Y + G+ + ++A L + K + PD+ T+ ++ G +G L E
Sbjct: 430 EMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEV 489
Query: 288 KRWYNK 293
+ Y K
Sbjct: 490 EALYTK 495
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 92/182 (50%), Gaps = 1/182 (0%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
+A +F +M +++ FN LL A V KK+D V L K + LGI DL ++N
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKM-EVLGIRNDLYTFN 124
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
+I F + A ++L +M K G D +T +L+ GF R +DA + + MV +
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+P++ +YNA +D L K+ A + E+ K I P+V T+ AL+ G N +A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 288 KR 289
R
Sbjct: 245 AR 246
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 102/218 (46%), Gaps = 10/218 (4%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + KA E+ K+F EM R +++N L+ + D+ F +
Sbjct: 336 LINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDF-F 394
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
GI PD+ +YN ++ D G L+ A + +M+K+ + LD++T+ T++ G G+ +A
Sbjct: 395 GISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEA 454
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ ++ ++P++ +Y + GL + + L +M+ + + + T
Sbjct: 455 WSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT------- 507
Query: 278 FVNEGNLEEAKRWYNKS-GCGMNKAIFKLLVPFVCEKG 314
+++G++ + K CG ++ K + VC+K
Sbjct: 508 -LSDGDITLSAELIKKMLSCGYAPSLLKDIKSGVCKKA 544
>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Glycine max]
Length = 747
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 122/254 (48%), Gaps = 5/254 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + + A ++ +EM C + ++N ++ + L D K
Sbjct: 371 LIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAK- 429
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G PD+ +YNT+I + + LDSA ++ M +G+ D+IT+NTLL G G+ +
Sbjct: 430 GCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEV 489
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+I++ M PN+ +YN +D L K+ +A++L+GEM+SK + PDV +F L G
Sbjct: 490 MEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTG 549
Query: 278 FVNEGNLEEA----KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV 333
F G+++ A +R + A + ++V E+ +++ A L + C
Sbjct: 550 FCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDP 609
Query: 334 DQAPLQLVVDRLAK 347
D ++V+D K
Sbjct: 610 DNYTYRVVIDGFCK 623
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 130/270 (48%), Gaps = 5/270 (1%)
Query: 21 PKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEIL 80
PK + +V++ + + LK L + F + F+ Y VQ+L + F +E++L
Sbjct: 7 PKHVAAVVK--IQTDPLKAL-EMFNSAKSEDGFKHTASTYKCIVQKLGHHGEFEEMEKLL 63
Query: 81 -EHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
E ++ + EG + YG+ + A F+ M NC+ +V S NA++ V
Sbjct: 64 SEMRENVNNALLEGAYIEAMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVE 123
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
++ ++ + + G++ D+ +Y IK+F +A LL M + G + +
Sbjct: 124 FGYHNQAHKVYMRMRDR-GVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAV 182
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
+ T++ G Y +G A ++++ M+ + P+V ++N + L + ++ L+G++
Sbjct: 183 AYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKV 242
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
+ + P++FTF ++G EG L+ A R
Sbjct: 243 LKRGVCPNLFTFNIFVQGLCREGALDRAVR 272
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 107/228 (46%), Gaps = 4/228 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I Y K M ++A +V + + + ++ +L+ D +FKD K
Sbjct: 301 IIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGK- 359
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ P +V YNT+IK +G + A L+ EM + G ++ T+N ++ G G +DA
Sbjct: 360 GLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDA 419
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ + + P++ +YN +DG + + A E+V M S+ + PDV T+ L+ G
Sbjct: 420 SHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNG 479
Query: 278 FVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
G EE + + GC N + ++V +C+ ++ A +L
Sbjct: 480 LCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDL 527
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 128/278 (46%), Gaps = 14/278 (5%)
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
+T R I + K A A ++ MP C+ +++ ++ +S + D LF ++
Sbjct: 149 YTIR-IKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEM 207
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF----- 208
+ + PD+V++N ++ KG + + LL ++ K+G+ +L TFN + G
Sbjct: 208 LARC-LCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGA 266
Query: 209 ----YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
N R +AE+ MVN P+ +YN+ +DG + + A ++ + K
Sbjct: 267 LDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGF 326
Query: 265 NPDVFTFYALIKGFVNEGNLEEAKRWYNKS-GCGMNKAI--FKLLVPFVCEKGDLDFAFN 321
PD FT+ +LI GF +G+ + A + G G+ +I + L+ + ++G + A
Sbjct: 327 KPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQ 386
Query: 322 LCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
L CL + LV++ L K V +A LV+
Sbjct: 387 LMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVD 424
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 137/313 (43%), Gaps = 50/313 (15%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALL----------------------GACVNSKKFDE- 145
++AR++FDEM R V++FN L+ G C N F+
Sbjct: 198 DHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIF 257
Query: 146 VDGLFKD--LPHKL------------------GIEPDLVSYNTIIKAFVDKGSLDSANTL 185
V GL ++ L + G EPD ++YN+II + KG + AN +
Sbjct: 258 VQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRV 317
Query: 186 LYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAI 245
L + KG + D T+ +L+ GF +G A +++ + +RP++ YN + GL+
Sbjct: 318 LKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQ 377
Query: 246 EKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS---GCGMNKAI 302
+ AL+L+ EM P+++T+ +I G G + +A + + GC +
Sbjct: 378 QGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFT 437
Query: 303 FKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV---- 358
+ L+ C++ LD A + R +S+ D +++ L K + EE E+
Sbjct: 438 YNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAME 497
Query: 359 ELGKTNSYCRYNL 371
E G T + YN+
Sbjct: 498 EKGCTPNIITYNI 510
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 105/234 (44%), Gaps = 4/234 (1%)
Query: 128 LSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLY 187
L++N+++ + + + KD K G +PD +Y ++I F G D A +
Sbjct: 296 LTYNSIIDGYCKKGMVQDANRVLKDAVFK-GFKPDEFTYCSLINGFCKDGDPDRAMAVFK 354
Query: 188 EMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEK 247
+ KG+R ++ +NTL+ G G A ++ M PN+ +YN ++GL
Sbjct: 355 DGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMG 414
Query: 248 QTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFK 304
A LV + +K PD+FT+ LI G+ + L+ A N+ G + +
Sbjct: 415 CVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYN 474
Query: 305 LLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
L+ +C+ G + + K + C + ++VD L K +V EA +L+
Sbjct: 475 TLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLL 528
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 98/194 (50%), Gaps = 2/194 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI Y K ++A ++ + M + V+++N LL + K +EV +FK + K
Sbjct: 441 LIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEK- 499
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G P++++YN I+ + ++ A LL EM+ KG++ D+++F TL GF G A
Sbjct: 500 GCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGA 559
Query: 218 EKIWETM-VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
+++ M +V +YN + + + A++L M++ +PD +T+ +I
Sbjct: 560 YQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVID 619
Query: 277 GFVNEGNLEEAKRW 290
GF GN+ + ++
Sbjct: 620 GFCKMGNITQGYKF 633
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 91/203 (44%), Gaps = 21/203 (10%)
Query: 77 EEILEHQKQYKDISKEGFTARLIAL------YGKAAMFENARKVFDEMPGRNCEQTVLSF 130
EE++E +K + ++G T +I KA A + EM + + V+SF
Sbjct: 487 EEVME---IFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSF 543
Query: 131 NALL-GACVNSKKFDEVDG---LFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLL 186
L G C K ++DG LF+ + + + +YN I+ AF ++ +++ A L
Sbjct: 544 GTLFTGFC----KIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLF 599
Query: 187 YEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR--PNVRSYNARLDGLA 244
M+ G D T+ ++ GF G K + NM R P++ ++ L+ L
Sbjct: 600 SVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFL--LENMEKRFIPSLTTFGRVLNCLC 657
Query: 245 IEKQTKKALELVGEMRSKEINPD 267
++ + +A+ ++ M K I P+
Sbjct: 658 VKDKVHEAVGIIHLMLQKGIVPE 680
>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 141/300 (47%), Gaps = 8/300 (2%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
+I+G + N+ + V + G+ + Y + R +L+ +
Sbjct: 126 LIKGFFTLRNVPKAVRVMEILEKFGQ--PDVFAYNALINGFCKMNRIDDATRVLDRMRS- 182
Query: 87 KDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
KD S + T +I + A KV D++ NC+ TV+++ L+ A + DE
Sbjct: 183 KDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDE 242
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
L ++ + G++PD+ +YNTII+ +G +D A ++ +E KG D+I++N LL
Sbjct: 243 ALKLLDEMLSR-GLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILL 301
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEIN 265
+ G++ + EK+ M + PNV +Y+ + L + + ++A+ L+ M+ K +
Sbjct: 302 RALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLT 361
Query: 266 PDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
PD +++ LI F EG L+ A + GC + + ++ +C+ G D A +
Sbjct: 362 PDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEI 421
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 106/206 (51%), Gaps = 3/206 (1%)
Query: 160 EPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEK 219
+PD+ +YN +I F +D A +L M K D +T+N ++ S G+ A K
Sbjct: 151 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 210
Query: 220 IWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFV 279
+ + +++ N +P V +Y ++ +E +AL+L+ EM S+ + PD+FT+ +I+G
Sbjct: 211 VLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMC 270
Query: 280 NEGNLE---EAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQA 336
EG ++ E R GC + + +L+ + +G + L + FSE+C +
Sbjct: 271 KEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 330
Query: 337 PLQLVVDRLAKELRVEEAKELVELGK 362
+++ L ++ ++EEA L++L K
Sbjct: 331 TYSILITTLCRDGKIEEAMNLLKLMK 356
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 124/269 (46%), Gaps = 5/269 (1%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
+E K+ +M C+ V++++ L+ K +E L K + K G+ PD SY+
Sbjct: 310 WEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEK-GLTPDAYSYD 368
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
+I AF +G LD A L M G D++ +NT+L NG+ A +I+ + +
Sbjct: 369 PLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEV 428
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
PN SYN L +AL ++ EM S I+PD T+ ++I EG +++A
Sbjct: 429 GCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKA 488
Query: 288 -KRWYNKSGCGMNKAI--FKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDR 344
+ + C + ++ + +++ C+ ++ A ++ C ++ ++++
Sbjct: 489 FELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEG 548
Query: 345 LAKELRVEEAKELV-ELGKTNSYCRYNLK 372
+ EA EL +L + N+ Y+ K
Sbjct: 549 IGFAGYRAEAMELANDLVRINAISEYSFK 577
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 117/262 (44%), Gaps = 8/262 (3%)
Query: 104 KAAMFEN----ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGI 159
+A M E A K+ DEM R + + ++N ++ D + ++L K G
Sbjct: 232 EATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELK-GC 290
Query: 160 EPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEK 219
EPD++SYN +++A +++G + L+ +M + +++T++ L+ +G+ +A
Sbjct: 291 EPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMN 350
Query: 220 IWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFV 279
+ + M + P+ SY+ + E + A+E + M S PD+ + ++
Sbjct: 351 LLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLC 410
Query: 280 NEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQA 336
G ++A + K GC N + + + + GD A ++ S D+
Sbjct: 411 KNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEI 470
Query: 337 PLQLVVDRLAKELRVEEAKELV 358
++ L +E V++A EL+
Sbjct: 471 TYNSMISCLCREGMVDKAFELL 492
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 79/177 (44%), Gaps = 4/177 (2%)
Query: 185 LLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLA 244
LL M +KG D+I L+ GF++ A ++ E + +P+V +YNA ++G
Sbjct: 107 LLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFG-QPDVFAYNALINGFC 165
Query: 245 IEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKA 301
+ A ++ MRSK+ +PD T+ +I + G L+ A + ++ C
Sbjct: 166 KMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQPTVI 225
Query: 302 IFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
+ +L+ +G +D A L S D ++ + KE V+ A E++
Sbjct: 226 TYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMI 282
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 71/152 (46%), Gaps = 4/152 (2%)
Query: 211 NGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
+G + ++ + ETMV P+V + G + KA+ ++ E+ K PDVF
Sbjct: 98 SGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVM-EILEKFGQPDVFA 156
Query: 271 FYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTF 327
+ ALI GF +++A R ++ + + +++ +C +G LD A + +
Sbjct: 157 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLL 216
Query: 328 SERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
S+ C ++++ E V+EA +L++
Sbjct: 217 SDNCQPTVITYTILIEATMLEGGVDEALKLLD 248
>gi|449503889|ref|XP_004162218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g16890, mitochondrial-like [Cucumis sativus]
Length = 697
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 121/264 (45%), Gaps = 8/264 (3%)
Query: 91 KEGFTARLI---ALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVD 147
K GF+ L ALY KA E + D + + S+N ++ K D
Sbjct: 436 KPGFSTYLTLIEALY-KAGKMEIGNRYMDRLINDGLISNIYSYNMVIDCLCKGKSMDRAS 494
Query: 148 GLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLG 207
+F+DL H GI P++V+YNT+I F G++D A LL + + R D+ TFN+L+ G
Sbjct: 495 EMFRDL-HNRGISPNIVTYNTLIGGFCRNGNMDKAQELLEMLLESRFRPDIFTFNSLIDG 553
Query: 208 FYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPD 267
+ +A + MV +V PNV +YN + ++ L+ +M+ I PD
Sbjct: 554 LCQAHKHENAFGCFTEMVEWDVPPNVITYNILICSFCAIGDVSRSTHLLRQMKLHGIQPD 613
Query: 268 VFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCK 324
F+F ALI+G+ + ++A++ ++ + G + + L+ +C+ G D A +
Sbjct: 614 TFSFNALIQGYTGKNRFQKAEKLFDSMLRLGIQPDNYTYGALIKSLCKSGRHDKAREIFL 673
Query: 325 RTFSERCLVDQAPLQLVVDRLAKE 348
C D L D LA
Sbjct: 674 SMKENGCTPDSYTCSLFSDTLAHS 697
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 113/262 (43%), Gaps = 2/262 (0%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
+I G+ + + + K+ LG F N YT + NAKR ++L+ K+
Sbjct: 270 LIHGVCRLGVVDEALRLMKQMEGLGYF-PNVFTYTILIDGFFNAKRAGEAFKVLQTMKER 328
Query: 87 KDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEV 146
+ E L+ + + A ++ E R T L + +L C+++
Sbjct: 329 NVVPNEATMRSLVHGVFRCIAPDKAFELLLEFVERKQGITQLVCDNIL-YCLSNNSMASE 387
Query: 147 DGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLL 206
+F K G P ++N + + K L T+ + G++ T+ TL+
Sbjct: 388 AVMFLIKTGKEGYVPSSSTFNITLACVLKKLDLKVTCTVFDNCVQSGVKPGFSTYLTLIE 447
Query: 207 GFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINP 266
Y G+ + + ++N + N+ SYN +D L K +A E+ ++ ++ I+P
Sbjct: 448 ALYKAGKMEIGNRYMDRLINDGLISNIYSYNMVIDCLCKGKSMDRASEMFRDLHNRGISP 507
Query: 267 DVFTFYALIKGFVNEGNLEEAK 288
++ T+ LI GF GN+++A+
Sbjct: 508 NIVTYNTLIGGFCRNGNMDKAQ 529
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 107/260 (41%), Gaps = 16/260 (6%)
Query: 7 LLSCSFSTTATATGPKFIGSVIRGIYKENNLKRL--------VDKFKKSSDLGRFRTNTG 58
LL+ F P+F+ S+++ ++N L + VD L + G
Sbjct: 108 LLNHEFKAKRVVLSPQFVVSILQN--QDNPLSAIRFYIWVSNVDPLLVKKQLIQ-----G 160
Query: 59 IYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEM 118
+ + R + ++L+ K+ E L +G+ + +VF ++
Sbjct: 161 VLVRNLHREGPDRPVLLSVDLLQQIKESGLKVTEELLCILFGSWGRLGLANYCVEVFGQI 220
Query: 119 PGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGS 178
T +NA++ A + S D F+ + + PD +YN +I G
Sbjct: 221 GLLGLNPTTRLYNAVMDALIKSNSLDLAYLKFQQMSSHNCV-PDRFTYNILIHGVCRLGV 279
Query: 179 LDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNA 238
+D A L+ +ME G ++ T+ L+ GF++ R +A K+ +TM NV PN + +
Sbjct: 280 VDEALRLMKQMEGLGYFPNVFTYTILIDGFFNAKRAGEAFKVLQTMKERNVVPNEATMRS 339
Query: 239 RLDGLAIEKQTKKALELVGE 258
+ G+ KA EL+ E
Sbjct: 340 LVHGVFRCIAPDKAFELLLE 359
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 57/121 (47%)
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
LG+ P YN ++ A + SLD A +M D T+N L+ G G +
Sbjct: 223 LGLNPTTRLYNAVMDALIKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDE 282
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
A ++ + M + PNV +Y +DG K+ +A +++ M+ + + P+ T +L+
Sbjct: 283 ALRLMKQMEGLGYFPNVFTYTILIDGFFNAKRAGEAFKVLQTMKERNVVPNEATMRSLVH 342
Query: 277 G 277
G
Sbjct: 343 G 343
>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
Length = 468
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 126/262 (48%), Gaps = 5/262 (1%)
Query: 103 GKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPD 162
KA M A +VF+ M +C +++++N L+ + N+ +F + LF+ + + +EPD
Sbjct: 21 AKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMKREKRVEPD 80
Query: 163 LVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWE 222
+YNT+I G+ + A LL EM K I ++ T+++++ + ++ K+ E
Sbjct: 81 RWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLE 140
Query: 223 TMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEG 282
M+ P+V ++N + G A +KA E+ M PD +++ LI G G
Sbjct: 141 EMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIG 200
Query: 283 NLEEAKRWYNK-----SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAP 337
L+E+ + ++ +G N F L+ +C G+L+ A + C ++
Sbjct: 201 KLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYT 260
Query: 338 LQLVVDRLAKELRVEEAKELVE 359
++ L + +V +A+EL E
Sbjct: 261 YTTLIAGLCRAEKVIQARELFE 282
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 151/326 (46%), Gaps = 9/326 (2%)
Query: 39 RLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFT-AR 97
+ +D F+ R + Y + L ++ ++L + K+I+ FT +
Sbjct: 63 KALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRD-KNIAANVFTYSS 121
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I K A E + KV +EM C V +FN ++ S ++ +++ +
Sbjct: 122 IIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVES- 180
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKK--GIRLDLITFNTLLLGFYSNGRFA 215
G +PD VSY+ +I G LD + +L EM + G ++ITF+TL+ G G
Sbjct: 181 GYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELE 240
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
A +++ +M+ +PN +Y + GL ++ +A EL +M I PD + +LI
Sbjct: 241 KALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLI 300
Query: 276 KGFVNEGNLEEAKRWYNK--SGCGMNKAI--FKLLVPFVCEKGDLDFAFNLCKRTFSERC 331
G+ G+++EA++ Y + G G+ I F L+ C+ G L A L ++
Sbjct: 301 AGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGL 360
Query: 332 LVDQAPLQLVVDRLAKELRVEEAKEL 357
D ++++ L++ +++EA E+
Sbjct: 361 AADTCTYRILIAGLSRATKLDEALEV 386
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 139/314 (44%), Gaps = 15/314 (4%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMP 119
+ G +Q A + E+ +H + LI K + + K+ EM
Sbjct: 154 FNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMA 213
Query: 120 GRNCE--QTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKG 177
R V++F+ L+ + + ++ +F + + G +P+ +Y T+I
Sbjct: 214 MRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSM-LEAGCKPNKYTYTTLIAGLCRAE 272
Query: 178 SLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVN-MNVRPNVRSY 236
+ A L +M + I D + +N+L+ G+ G +AEK++ M ++P + ++
Sbjct: 273 KVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTF 332
Query: 237 NARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGC 296
N +DG + +A ELV EM +K + D T+ LI G L+EA Y +
Sbjct: 333 NTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQ--- 389
Query: 297 GMNKAIFKL----LVPFV---CEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKEL 349
M + F L V FV C+ G++D A+ + + T + + +++ + L K
Sbjct: 390 -MREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLG 448
Query: 350 RVEEAKELVELGKT 363
RVE+A++L+E K
Sbjct: 449 RVEDAQKLMEPAKA 462
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 94/198 (47%), Gaps = 4/198 (2%)
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
+Y+ ++++ G L A + M+ + L+T+N L+ + G F A ++++M
Sbjct: 12 AYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSM 71
Query: 225 V-NMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
V P+ +YN + GL T+ A +L+ EMR K I +VFT+ ++IK V E
Sbjct: 72 KREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAK 131
Query: 284 LEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL 340
EE+ + + +GC + F ++ +++ A + + D +
Sbjct: 132 PEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHI 191
Query: 341 VVDRLAKELRVEEAKELV 358
++ LAK +++E+ +++
Sbjct: 192 LIHGLAKIGKLDESLKIL 209
>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 152/322 (47%), Gaps = 16/322 (4%)
Query: 47 SSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIA---LYG 103
SS G TN ++ ++ A++ R E + ++ + +G+ + A L G
Sbjct: 38 SSMCGNCGTNNLVFDLLIRTYVQARKLR------EGTEAFRILRSKGYLVSINACNSLLG 91
Query: 104 ---KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIE 160
K E A +V E+ E V + N ++ A KFD+V ++ GI
Sbjct: 92 GLVKIDWVELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGN-GIY 150
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
D+V+YNT+I A+ +G L+ A ++ M KG++ L T+N ++ G GR+A A+ I
Sbjct: 151 ADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGI 210
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
M+N+ + P+ +YN L +A E+ GEM + + PD+ +F +LI F
Sbjct: 211 LIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSR 270
Query: 281 EGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAP 337
+L++A ++ K G + I+ +L+ C G++ A + + C++D
Sbjct: 271 NRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIA 330
Query: 338 LQLVVDRLAKELRVEEAKELVE 359
+++ L KE + +A +L +
Sbjct: 331 YNTILNGLCKEKMLTDADKLFD 352
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 96/190 (50%), Gaps = 1/190 (0%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K M +A K+FDEM R +F L+ + LF + + I+PD+
Sbjct: 340 KEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQR-NIKPDI 398
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
V+YNT+I F G ++ A+ L M + I + IT+ L+ + S G ++A ++W+
Sbjct: 399 VAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDV 458
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M+ ++P + + N + G + KA E +G M +K + PD ++ LI GFV E N
Sbjct: 459 MIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDN 518
Query: 284 LEEAKRWYNK 293
+++A W NK
Sbjct: 519 MDKAFLWINK 528
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 107/222 (48%), Gaps = 12/222 (5%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
F A+++F EM + ++SF++L+ ++ D+ F+D+ K G+ PD V Y
Sbjct: 239 FSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMK-KFGLVPDNVIYT 297
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
++ + G++ A + EM ++G LD+I +NT+L G DA+K+++ MV
Sbjct: 298 VLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVER 357
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
P+ ++ + G + KAL L G M + I PD+ + LI GF G +E+A
Sbjct: 358 GALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKA 417
Query: 288 KRWYNKSGCGM-------NKAIFKLLVPFVCEKGDLDFAFNL 322
++ GM N + +L+ C G + AF L
Sbjct: 418 SELWD----GMISRKIFPNHITYGILINAYCSVGHVSEAFRL 455
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 125/271 (46%), Gaps = 8/271 (2%)
Query: 26 SVIRGIYKENNLK---RLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEH 82
+++ G+ KE L +L D+ + L F T T + G Q N + + +
Sbjct: 333 TILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQD-GNMTKALSLFGTMTQ 391
Query: 83 QKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKK 142
+ DI LI + K E A +++D M R +++ L+ A +
Sbjct: 392 RNIKPDIVAYN---TLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGH 448
Query: 143 FDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFN 202
E L+ + K GI+P LV+ NT+IK + G A+ L M KG+ D I++N
Sbjct: 449 VSEAFRLWDVMIEK-GIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYN 507
Query: 203 TLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
TL+ GF A M + P++ +YN ++G + + ++A ++ +M K
Sbjct: 508 TLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEK 567
Query: 263 EINPDVFTFYALIKGFVNEGNLEEAKRWYNK 293
INPD T+ ALI G V + NL EA R++++
Sbjct: 568 GINPDRSTYTALINGHVTQDNLNEAFRFHDE 598
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 84/170 (49%), Gaps = 1/170 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI Y A +++D M + + T+++ N ++ S + D + K
Sbjct: 439 LINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAK- 497
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ PD +SYNT+I FV + ++D A + +MEK+G+ D+IT+N ++ GF GR +A
Sbjct: 498 GVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEA 557
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPD 267
E + M+ + P+ +Y A ++G + +A EM + PD
Sbjct: 558 ELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPD 607
>gi|449433429|ref|XP_004134500.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g16890, mitochondrial-like
[Cucumis sativus]
Length = 688
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 121/264 (45%), Gaps = 8/264 (3%)
Query: 91 KEGFTARLI---ALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVD 147
K GF+ L ALY KA E + D + + S+N ++ K D
Sbjct: 427 KPGFSTYLTLIEALY-KAGKMEIGNRYMDRLINDGLISNIYSYNMVIDCLCKGKSMDRAS 485
Query: 148 GLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLG 207
+F+DL H GI P++V+YNT+I F G++D A LL + + R D+ TFN+L+ G
Sbjct: 486 EMFRDL-HNRGISPNIVTYNTLIGGFCRNGNMDKAQELLEMLLESRFRPDIFTFNSLIDG 544
Query: 208 FYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPD 267
+ +A + MV +V PNV +YN + ++ L+ +M+ I PD
Sbjct: 545 LCQAHKHENAFGCFTEMVEWDVPPNVITYNILICSFCAIGDVSRSTHLLRQMKLHGIQPD 604
Query: 268 VFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCK 324
F+F ALI+G+ + ++A++ ++ + G + + L+ +C+ G D A +
Sbjct: 605 TFSFNALIQGYTGKNRFQKAEKLFDSMLRLGIQPDNYTYGALIKSLCKSGRHDKAREIFL 664
Query: 325 RTFSERCLVDQAPLQLVVDRLAKE 348
C D L D LA
Sbjct: 665 SMKENGCTPDSYTCSLFSDTLAHS 688
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 109/262 (41%), Gaps = 11/262 (4%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
+I G+ + + + K+ LG F N YT + NAKR ++L+ K+
Sbjct: 270 LIHGVCRLGVVDEALRLMKQMEGLGYF-PNVFTYTILIDGFFNAKRAGETFKVLQTMKER 328
Query: 87 KDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEV 146
+ E L+ + + A ++ E R T L + +L N+ E
Sbjct: 329 NVVPNEATMRSLVHGVFRCIAPDKAFELLLEFVERKQGITQLVCDNILYCLSNNSMASEA 388
Query: 147 DGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLL 206
+ P ++N + + K L T+ + G++ T+ TL+
Sbjct: 389 ----------VMFXPSSSTFNITLACVLKKLDLKVTCTVFDNCVQSGVKPGFSTYLTLIE 438
Query: 207 GFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINP 266
Y G+ + + ++N + N+ SYN +D L K +A E+ ++ ++ I+P
Sbjct: 439 ALYKAGKMEIGNRYMDRLINDGLISNIYSYNMVIDCLCKGKSMDRASEMFRDLHNRGISP 498
Query: 267 DVFTFYALIKGFVNEGNLEEAK 288
++ T+ LI GF GN+++A+
Sbjct: 499 NIVTYNTLIGGFCRNGNMDKAQ 520
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 106/260 (40%), Gaps = 16/260 (6%)
Query: 7 LLSCSFSTTATATGPKFIGSVIRGIYKENNLKRL--------VDKFKKSSDLGRFRTNTG 58
LL+ F P+F+ S+++ ++N L + VD L + G
Sbjct: 108 LLNHEFKAKRVVLSPQFVVSILQN--QDNPLSAIRFYIWVSNVDPLLVKKQLIQ-----G 160
Query: 59 IYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEM 118
+ + R + ++L+ K+ E L +G+ + +VF ++
Sbjct: 161 VLVRNLHREGPDRPVLLSVDLLQQIKESGLKVTEELLCILFGSWGRLGLANYCVEVFGQI 220
Query: 119 PGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGS 178
T +NA++ A + S D F+ + + PD +YN +I G
Sbjct: 221 GLLGLNPTTRLYNAVMDALIKSNSLDLAYLKFQQMSSHNCV-PDRFTYNILIHGVCRLGV 279
Query: 179 LDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNA 238
+D A L+ +ME G ++ T+ L+ GF++ R + K+ +TM NV PN + +
Sbjct: 280 VDEALRLMKQMEGLGYFPNVFTYTILIDGFFNAKRAGETFKVLQTMKERNVVPNEATMRS 339
Query: 239 RLDGLAIEKQTKKALELVGE 258
+ G+ KA EL+ E
Sbjct: 340 LVHGVFRCIAPDKAFELLLE 359
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 56/121 (46%)
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
LG+ P YN ++ A + SLD A +M D T+N L+ G G +
Sbjct: 223 LGLNPTTRLYNAVMDALIKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDE 282
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
A ++ + M + PNV +Y +DG K+ + +++ M+ + + P+ T +L+
Sbjct: 283 ALRLMKQMEGLGYFPNVFTYTILIDGFFNAKRAGETFKVLQTMKERNVVPNEATMRSLVH 342
Query: 277 G 277
G
Sbjct: 343 G 343
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 47/108 (43%), Gaps = 6/108 (5%)
Query: 185 LLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVN---MNVRPNVRSYNARLD 241
LL ++++ G++ +T L + F S GR A E + + P R YNA +D
Sbjct: 181 LLQQIKESGLK---VTEELLCILFGSWGRLGLANYCVEVFGQIGLLGLNPTTRLYNAVMD 237
Query: 242 GLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
L A +M S PD FT+ LI G G ++EA R
Sbjct: 238 ALIKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALR 285
>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Glycine max]
Length = 583
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 118/220 (53%), Gaps = 4/220 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K M + ARK+FD++ ++ ++FN ++ A + +E L + +
Sbjct: 349 LINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDE- 407
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
GI P++ +YN +I ++ +A LL EME ++ D++T+N L+ G+ +G + A
Sbjct: 408 GIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKA 467
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
EK+ M+N+ V+PN +YN +DG +E K AL++ +M + +V T+ LIKG
Sbjct: 468 EKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKG 527
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKG 314
F G LE+A R N + G N+ + ++ + EKG
Sbjct: 528 FCKTGKLEDANRLLNEMLEKGLNPNRTTYDVVRLEMLEKG 567
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 151/310 (48%), Gaps = 19/310 (6%)
Query: 78 EILEHQKQYKDISKEGFTARL----IALYG--KAAMFENARKVFDEMPGRNCEQTVLSFN 131
E E Q YK++ K L I + G KA A V +++ ++++N
Sbjct: 180 ETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYN 239
Query: 132 ALL-GACV--NSKKFDEVDGLFKD-LPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLY 187
L+ G C ++ K D + K+ L +K I P+ +++NT+I F ++ +A
Sbjct: 240 TLIDGHCKKGSAGKMYRADAILKEMLANK--ICPNEITFNTLIDGFCKDENVLAAKNAFE 297
Query: 188 EMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEK 247
EM+++G++ +++T+N+L+ G +NG+ +A +W+ MV + ++PN+ ++NA ++G +K
Sbjct: 298 EMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKK 357
Query: 248 QTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFK 304
K+A +L ++ +++ P+ TF +I F G +EE +N G N + +
Sbjct: 358 MIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYN 417
Query: 305 LLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAK----ELVEL 360
L+ +C ++ A L + D +++ K+ +A+ E++ +
Sbjct: 418 CLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNV 477
Query: 361 GKTNSYCRYN 370
G ++ YN
Sbjct: 478 GVKPNHVTYN 487
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 102/229 (44%), Gaps = 32/229 (13%)
Query: 56 NTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVF 115
N G+ + V R F+W QK+++ T +++ L + + R
Sbjct: 53 NAGVDSELVLRF-----FQW------SQKEFRISYGLETTGKVLHLLANSKKYSKVRSFL 101
Query: 116 DEMPGRNCEQTVLS-FNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFV 174
D++ +N + TV S F++LL L D P + D+ ++ A+V
Sbjct: 102 DKLV-KNEKHTVSSVFHSLL--------------LGGDRPCANALITDM-----LVLAYV 141
Query: 175 DKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVR 234
+ SA + ++ G +L L + N LL + + +++ M+ ++PN+
Sbjct: 142 TNLEIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLT 201
Query: 235 SYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
++N ++GL + KA +++ ++++ +P++ T+ LI G +G+
Sbjct: 202 TFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGS 250
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 72/166 (43%), Gaps = 7/166 (4%)
Query: 56 NTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVF 115
N Y + L + R +++L + Y+ + LI + K A K+
Sbjct: 412 NVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLL 471
Query: 116 DEMPGRNCEQTVLSFNALL-GACV--NSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKA 172
EM + +++N L+ G C+ N K +V + K G ++V+YN +IK
Sbjct: 472 GEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKV----RTQMEKEGKRANVVTYNVLIKG 527
Query: 173 FVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAE 218
F G L+ AN LL EM +KG+ + T++ + L G D E
Sbjct: 528 FCKTGKLEDANRLLNEMLEKGLNPNRTTYDVVRLEMLEKGFIPDIE 573
>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
Length = 548
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 126/252 (50%), Gaps = 3/252 (1%)
Query: 38 KRLVDKFKKSSDLGR--FRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFT 95
KR+ D F ++ R R N YT V L N+ R+ +L + K
Sbjct: 204 KRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITY 263
Query: 96 ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPH 155
+ L+ + K A+++F+EM + + ++++++L+ + DE + +F DL
Sbjct: 264 SALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMF-DLMV 322
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
G D+VSYNT+I F ++ L EM ++G+ + +T+NTL+ GF+ G
Sbjct: 323 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVD 382
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
A++ + M + P++ +YN L GL + +KAL + +M+ +E++ D+ T+ +I
Sbjct: 383 KAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVI 442
Query: 276 KGFVNEGNLEEA 287
+G G +EEA
Sbjct: 443 RGMCKTGKVEEA 454
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/352 (21%), Positives = 156/352 (44%), Gaps = 48/352 (13%)
Query: 24 IGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQ 83
IGS++ G + N + V K ++G ++ + Y + L KR
Sbjct: 158 IGSLVNGFCRRNRVSDAVSLVDKMVEIG-YKPDIVAYNAIIDSLCKTKRV---------- 206
Query: 84 KQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKF 143
+A F E+ + V+++ AL+ NS ++
Sbjct: 207 -------------------------NDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT 203
+ L D+ K I P++++Y+ ++ AFV G + A L EM + I D++T+++
Sbjct: 242 SDAARLLSDMIKK-KITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSS 300
Query: 204 LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
L+ G + R +A ++++ MV+ +V SYN ++G K+ + ++L EM +
Sbjct: 301 LVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRG 360
Query: 264 INPDVFTFYALIKGFVNEGNLEEAKRWYNKS---GCGMNKAIFKLLVPFVCEKGDLDFAF 320
+ + T+ LI+GF G++++A+ ++++ G + + +L+ +C+ G+L+ A
Sbjct: 361 LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKAL 420
Query: 321 NLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKTNSYCRYNLK 372
+ + +D V+ + K +VEEA L +C +LK
Sbjct: 421 VIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSL--------FCSLSLK 464
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 94/186 (50%), Gaps = 1/186 (0%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
+ A ++FD M + C V+S+N L+ +K+ ++ LF+++ + G+ + V+YN
Sbjct: 311 IDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQR-GLVSNTVTYN 369
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
T+I+ F G +D A +M+ GI D+ T+N LL G NG A I+E M
Sbjct: 370 TLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKR 429
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+ ++ +Y + G+ + ++A L + K + PD+ T+ ++ G +G L E
Sbjct: 430 EMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEV 489
Query: 288 KRWYNK 293
+ Y K
Sbjct: 490 EALYTK 495
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 92/182 (50%), Gaps = 1/182 (0%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
+A +F +M +++ FN LL A V KK+D V L K + LGI DL ++N
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKM-EVLGIRNDLYTFN 124
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
+I F + A ++L +M K G D +T +L+ GF R +DA + + MV +
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+P++ +YNA +D L K+ A + E+ K I P+V T+ AL+ G N +A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 288 KR 289
R
Sbjct: 245 AR 246
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 102/218 (46%), Gaps = 10/218 (4%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + KA E+ K+F EM R +++N L+ + D+ F +
Sbjct: 336 LINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDF-F 394
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
GI PD+ +YN ++ D G L+ A + +M+K+ + LD++T+ T++ G G+ +A
Sbjct: 395 GISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEA 454
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ ++ ++P++ +Y + GL + + L +M+ + + + T
Sbjct: 455 WSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT------- 507
Query: 278 FVNEGNLEEAKRWYNKS-GCGMNKAIFKLLVPFVCEKG 314
+++G++ + K CG ++ K + VC+K
Sbjct: 508 -LSDGDITLSAELIKKMLSCGYAPSLLKDIKSGVCKKA 544
>gi|356564530|ref|XP_003550506.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g11690-like [Glycine max]
Length = 556
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 134/284 (47%), Gaps = 10/284 (3%)
Query: 84 KQYKDISKEGFTAR------LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGAC 137
+ Y+++++ G LI+ Y M + A KVF EM + V+++N L+G
Sbjct: 249 QMYENMNRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGL 308
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLD 197
KKF E L + +K+G+ P++V+YN +I F D G +D+A L +++ G+
Sbjct: 309 CRGKKFGEAVKLVHKV-NKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPT 367
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
L+T+NTL+ G+ A A + + M + + +Y +D A T KA E+
Sbjct: 368 LVTYNTLIAGYSKVENLAGALDLVKEMEERCIARSKVTYTILIDAFARLNYTDKACEMHS 427
Query: 258 EMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSG---CGMNKAIFKLLVPFVCEKG 314
M + PDV+T+ LI G GN++EA + + G N I+ ++ C++G
Sbjct: 428 LMEKSGLVPDVYTYSVLIHGXCVNGNMKEASKPFKSLGEMHLQPNSVIYNTMIHGYCKEG 487
Query: 315 DLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
A L + + A + L ++ + +EA+ L+
Sbjct: 488 SSYRALRLLNEMVHSGMVPNVASFCSTMGLLCRDEKWKEAELLL 531
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 110/271 (40%), Gaps = 5/271 (1%)
Query: 55 TNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKV 114
T T +Y V ++ L H L+ L ++ F+ A +
Sbjct: 87 TYTPLYDAIVNAYVHSHSTDQALTFLHHMIHEGHAPLSNTFNNLLCLLIRSNYFDKAWWI 146
Query: 115 FDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFV 174
F+ + + SF ++ C + F V L L + G+ P++V Y T+I
Sbjct: 147 FNVLKSK-VVLNAYSFGIMITGCCEAGYFVRVFRLLAVL-EEFGLSPNVVIYTTLIDGCC 204
Query: 175 DKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVR 234
G + A L +M++ G+ + T++ L+ GF+ G + +++E M + PN
Sbjct: 205 KNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPNAY 264
Query: 235 SYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW---Y 291
+YN + + KA ++ EMR K I V T+ LI G EA +
Sbjct: 265 AYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKV 324
Query: 292 NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
NK G N + +L+ C+ G +D A L
Sbjct: 325 NKVGLSPNIVTYNILINGFCDVGKMDTAVRL 355
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 86/179 (48%), Gaps = 2/179 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LIA Y K A + EM R ++ +++ L+ A D+ + L K
Sbjct: 374 LIAGYSKVENLAGALDLVKEMEERCIARSKVTYTILIDAFARLNYTDKACEM-HSLMEKS 432
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ PD+ +Y+ +I G++ A+ + + ++ + + +NT++ G+ G A
Sbjct: 433 GLVPDVYTYSVLIHGXCVNGNMKEASKPFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRA 492
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
++ MV+ + PNV S+ + + L +++ K+A L+G+M + + P V + Y ++
Sbjct: 493 LRLLNEMVHSGMVPNVASFCSTMGLLCRDEKWKEAELLLGQMINSGLKPSV-SLYKMVH 550
>gi|413950073|gb|AFW82722.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 620
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 147/344 (42%), Gaps = 23/344 (6%)
Query: 24 IGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWI----EEI 79
+G+ R + LK ++ DLG R + R A A R W +
Sbjct: 97 VGAFARAGAPDRALKTF---YRAVHDLGCARPHRAAALQPPHRRAAAGR-TWALCQNNRV 152
Query: 80 LEHQKQYKDISKEGFT------ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNAL 133
+K +++++G A ++++ K + A +V MP S+NA+
Sbjct: 153 GAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMP-----PVAASYNAI 207
Query: 134 LGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKG 193
+ A + EV + D+ + G++P++++Y TI+ AF G L A +L M G
Sbjct: 208 VLALCREFRMQEVFSVVSDMVGR-GLQPNVITYTTIVDAFCKAGELRMACAILARMVITG 266
Query: 194 IRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKAL 253
+++TF L+ G + +GR DA +W MV P+ SYN + GL K A
Sbjct: 267 CTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGAS 326
Query: 254 ELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFV 310
++ M P+V T+ LI GF G+L A +N +SGC N ++ +V
Sbjct: 327 SILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVF 386
Query: 311 CEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA 354
C+K + A +L + E C + ++ L RV A
Sbjct: 387 CKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRA 430
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 145/320 (45%), Gaps = 17/320 (5%)
Query: 8 LSCSFSTTATATG--PKFIG--SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGT 63
++C+ TG P + +++RG++ + + +D ++ G + +T Y
Sbjct: 254 MACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEG-WAPSTVSYNIL 312
Query: 64 VQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNC 123
++ L + + IL +Q+ + LI + KA A ++++M C
Sbjct: 313 IRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGC 372
Query: 124 EQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIE---PDLVSYNTIIKAFVDKGSLD 180
+ V+ + ++ F++ K L K+ +E P+ V++NT+I++ D +
Sbjct: 373 KPNVVVYTNMVDVFCKKLMFNQA----KSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVG 428
Query: 181 SANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARL 240
A + +EM + G + T+N L+ G + G DA + M + + ++ +YN +
Sbjct: 429 RALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVV 488
Query: 241 DGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW----YNKSGC 296
GL + +++A+ VG+M + I P+ FTF A+I + EG + A W N C
Sbjct: 489 SGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAA-WMLGAMNVVNC 547
Query: 297 GMNKAIFKLLVPFVCEKGDL 316
N ++ +L+ +C + L
Sbjct: 548 HRNILVYTILMAELCNQDKL 567
>gi|357122161|ref|XP_003562784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Brachypodium distachyon]
Length = 791
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 129/263 (49%), Gaps = 4/263 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI+ + A+++ A KVFDEM E ++ N+LL ++++DE G+ K++ +
Sbjct: 253 LISCCRRRALYKEAAKVFDEMRAAGFEPDKVTLNSLLDVYGKARRYDEAIGVLKEM-EQG 311
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G P +V+YN++I ++V G L+ A L EME KGI D+IT+ TL+ G G+ A
Sbjct: 312 GCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEVKGIEPDVITYTTLVSGLDRAGKIDAA 371
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ M+ +PN+ +YNA + + + + + + E+RS PDV T+ L+
Sbjct: 372 IGTYNEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMIVFDEIRSAGFVPDVVTWNTLLAV 431
Query: 278 FVNEGNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
F G E + KSG + + L+ G D A + KR D
Sbjct: 432 FGQNGLDTEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIHPD 491
Query: 335 QAPLQLVVDRLAKELRVEEAKEL 357
+ V+ LA+ R E+A++L
Sbjct: 492 ISTYNAVLSALARGGRWEQAEKL 514
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 140/294 (47%), Gaps = 13/294 (4%)
Query: 80 LEHQKQYKDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACV 138
L+ + + K I + T L++ +A + A ++EM C+ + ++NAL+
Sbjct: 339 LKEEMEVKGIEPDVITYTTLVSGLDRAGKIDAAIGTYNEMLRNGCKPNLCTYNALIKLHG 398
Query: 139 NSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL 198
KF E+ +F ++ G PD+V++NT++ F G + + EM+K G +
Sbjct: 399 VRGKFPEMMIVFDEI-RSAGFVPDVVTWNTLLAVFGQNGLDTEVSGVFKEMKKSGYVPER 457
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
T+ +L+ + G F A +I++ M+ + P++ +YNA L LA + ++A +L E
Sbjct: 458 DTYVSLISSYSRCGLFDQAMEIYKRMIEAGIHPDISTYNAVLSALARGGRWEQAEKLFAE 517
Query: 259 MRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN-------KSGCGMNKAIFKLLVPFVC 311
M + + PD ++ +L+ + N L++ K +S G+ K + L+ V
Sbjct: 518 MENLDSRPDELSYSSLLHAYANAKKLDKMKSLSEDIYAERIESHNGLVKTLV-LVNSKVN 576
Query: 312 EKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKTNS 365
D + AF +R RC +D L ++ K V++ +E++ L K +S
Sbjct: 577 NLSDTEKAFLELRR---RRCSLDINVLNAMISIYGKNGMVKKVEEILSLMKESS 627
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 102/226 (45%), Gaps = 10/226 (4%)
Query: 88 DISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSK---KFD 144
D +TA LI+ +A+ F +A VF M ++++N +L V SK +
Sbjct: 173 DPDASAYTA-LISALSRASRFRDAVAVFRRMVANGVCPALVTYNVVLH--VYSKIAVPWK 229
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
EV L + K GI D +YNT+I + A + EM G D +T N+L
Sbjct: 230 EVLALVDSM-RKDGIPLDRYTYNTLISCCRRRALYKEAAKVFDEMRAAGFEPDKVTLNSL 288
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
L + R+ +A + + M P+V +YN+ + + ++A +L EM K I
Sbjct: 289 LDVYGKARRYDEAIGVLKEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEVKGI 348
Query: 265 NPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLV 307
PDV T+ L+ G G ++ A YN ++GC N + L+
Sbjct: 349 EPDVITYTTLVSGLDRAGKIDAAIGTYNEMLRNGCKPNLCTYNALI 394
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 112/267 (41%), Gaps = 42/267 (15%)
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
+ DIS + A L AL + +E A K+F EM + LS+++LL A N+KK D+
Sbjct: 489 HPDIST--YNAVLSAL-ARGGRWEQAEKLFAEMENLDSRPDELSYSSLLHAYANAKKLDK 545
Query: 146 VDGLFKDL------PHKLGIEPDLVSYNTII-------KAFVD----------------- 175
+ L +D+ H G+ LV N+ + KAF++
Sbjct: 546 MKSLSEDIYAERIESHN-GLVKTLVLVNSKVNNLSDTEKAFLELRRRRCSLDINVLNAMI 604
Query: 176 -----KGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
G + +L M++ I L T+N+L+ + G E I + + R
Sbjct: 605 SIYGKNGMVKKVEEILSLMKESSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSRAR 664
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA--- 287
P+ SYN + + Q K+A L EM+ + PD+ T+ +K +V EEA
Sbjct: 665 PDRYSYNTMIYAYGRKGQMKEASRLFSEMKCSGLVPDIVTYNIFVKSYVANSMFEEAIDL 724
Query: 288 KRWYNKSGCGMNKAIFKLLVPFVCEKG 314
R+ GC N+ + ++ C G
Sbjct: 725 VRYMVTHGCKPNERTYNTILQEYCSHG 751
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 122/298 (40%), Gaps = 39/298 (13%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI L+G F VFDE+ V+++N LL + EV G+FK++ K
Sbjct: 393 LIKLHGVRGKFPEMMIVFDEIRSAGFVPDVVTWNTLLAVFGQNGLDTEVSGVFKEM-KKS 451
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G P+ +Y ++I ++ G D A + M + GI D+ T+N +L GR+ A
Sbjct: 452 GYVPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIHPDISTYNAVLSALARGGRWEQA 511
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKK---------------------ALELV 256
EK++ M N++ RP+ SY++ L A K+ K L LV
Sbjct: 512 EKLFAEMENLDSRPDELSYSSLLHAYANAKKLDKMKSLSEDIYAERIESHNGLVKTLVLV 571
Query: 257 G--------------EMRSKEINPDVFTFYALIKGFVNEG---NLEEAKRWYNKSGCGMN 299
E+R + + D+ A+I + G +EE +S ++
Sbjct: 572 NSKVNNLSDTEKAFLELRRRRCSLDINVLNAMISIYGKNGMVKKVEEILSLMKESSINLS 631
Query: 300 KAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
A + L+ GD + N+ S R D+ ++ ++ +++EA L
Sbjct: 632 TATYNSLMHMYSRLGDCEKCENILTEIKSSRARPDRYSYNTMIYAYGRKGQMKEASRL 689
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 103/234 (44%), Gaps = 7/234 (2%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMP 119
Y+ + ANAK+ ++ + E + S G L+ + K + K F E+
Sbjct: 530 YSSLLHAYANAKKLDKMKSLSEDIYAERIESHNGLVKTLVLVNSKVNNLSDTEKAFLELR 589
Query: 120 GRNCEQTVLSFNALL---GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDK 176
R C + NA++ G KK +E+ L K+ I +YN+++ +
Sbjct: 590 RRRCSLDINVLNAMISIYGKNGMVKKVEEILSLMKES----SINLSTATYNSLMHMYSRL 645
Query: 177 GSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSY 236
G + +L E++ R D ++NT++ + G+ +A +++ M + P++ +Y
Sbjct: 646 GDCEKCENILTEIKSSRARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKCSGLVPDIVTY 705
Query: 237 NARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
N + ++A++LV M + P+ T+ +++ + + G + + K +
Sbjct: 706 NIFVKSYVANSMFEEAIDLVRYMVTHGCKPNERTYNTILQEYCSHGRIADGKSF 759
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 87/189 (46%), Gaps = 16/189 (8%)
Query: 76 IEEILEHQKQYK-DISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL 134
+EEIL K+ ++S + + L+ +Y + E + E+ S+N ++
Sbjct: 616 VEEILSLMKESSINLSTATYNS-LMHMYSRLGDCEKCENILTEIKSSRARPDRYSYNTMI 674
Query: 135 GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGI 194
A + E LF ++ G+ PD+V+YN +K++V + A L+ M G
Sbjct: 675 YAYGRKGQMKEASRLFSEMKCS-GLVPDIVTYNIFVKSYVANSMFEEAIDLVRYMVTHGC 733
Query: 195 RLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALE 254
+ + T+NT+L + S+GR AD + + ++ P + +++ ++ LE
Sbjct: 734 KPNERTYNTILQEYCSHGRIADGKSFISNLPELH--PGIS-----------KREQQRLLE 780
Query: 255 LVGEMRSKE 263
L+ + S++
Sbjct: 781 LLAKHTSRD 789
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 129/262 (49%), Gaps = 5/262 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI Y K M + A +F E+ +N T+ S+N+L+ NS + V L ++ H
Sbjct: 341 LIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEM-HGS 399
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
PD+V+YN +I A +G + A +L M KKG++ +++T+N ++ G+ A
Sbjct: 400 AQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVA 459
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ I+ MV + P++ +YN ++G + +A+ L EMR K + PD+ ++ +LI G
Sbjct: 460 KDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDG 519
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
N G + + ++ SG + + +L+ C+ D A +L R E D
Sbjct: 520 LCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISL-FRQIVEGIWPD 578
Query: 335 QAPLQLVVDRLAKELRVEEAKE 356
+VD L K +++ A++
Sbjct: 579 FYTNHAIVDNLCKGEKLKMAED 600
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 106/207 (51%), Gaps = 3/207 (1%)
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
K ++P+LV Y+ +I G + A L ++ ++GI LD +T+N+L+ G S GR+
Sbjct: 188 KSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQ 247
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
+ ++ MV NV P+ ++N +D L E + +A ++ M + PD+ T+ AL+
Sbjct: 248 EVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALM 307
Query: 276 KGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCL 332
+G+ + N+ EA+ +N K G + + +L+ C+ +D A L K ++ +
Sbjct: 308 EGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLV 367
Query: 333 VDQAPLQLVVDRLAKELRVEEAKELVE 359
A ++D L R+ K+L++
Sbjct: 368 PTIASYNSLIDGLCNSGRISHVKKLLD 394
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 149/339 (43%), Gaps = 17/339 (5%)
Query: 25 GSVIRGIYKENNLK---RLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILE 81
G++I G+ K +K L+ + +KSS + N +Y+ + L + ++ + L
Sbjct: 164 GTLINGLSKNGQIKAALHLLQEMEKSS----VQPNLVMYSALIDGLC---KDGFVSDALG 216
Query: 82 HQKQY--KDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACV 138
Q + I + T LI ++ ++ +M N + +FN L+ A
Sbjct: 217 LCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALC 276
Query: 139 NSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL 198
+ E G+ + K G +PD+V+YN +++ + + ++ A L M K+G+ D+
Sbjct: 277 KEGRILEAQGVLA-MMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDV 335
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
+ +N L+ G+ +A +++ + N N+ P + SYN+ +DGL + +L+ E
Sbjct: 336 LNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDE 395
Query: 259 MRSKEINPDVFTFYALIKGFVNEGNLEEA---KRWYNKSGCGMNKAIFKLLVPFVCEKGD 315
M PDV T+ LI EG + EA K G N + ++ C + +
Sbjct: 396 MHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNN 455
Query: 316 LDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA 354
++ A ++ R D ++++ K V+EA
Sbjct: 456 VNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEA 494
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 143/310 (46%), Gaps = 19/310 (6%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQK---QYKDISKEGFTARLIALYGKAAMFENARKVFD 116
Y + L N+ R ++++L+ Q D+ + + AL + + E A V
Sbjct: 373 YNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVT--YNILIDALCKEGRILE-ALGVLV 429
Query: 117 EMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKL---GIEPDLVSYNTIIKA 172
M + + ++++NA++ G C+ + + KD+ +++ G+EPD+++YN +I
Sbjct: 430 MMMKKGVKPNIVTYNAMMDGYCLRNNV-----NVAKDIFNRMVKSGLEPDILNYNVLING 484
Query: 173 FVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPN 232
+ +D A L EM K + D+ ++N+L+ G + GR +++ + M + P+
Sbjct: 485 YCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPD 544
Query: 233 VRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL---EEAKR 289
V +YN LD + KA+ L ++ + I PD +T +A++ L E+A +
Sbjct: 545 VITYNILLDAFCKTQPFDKAISLFRQI-VEGIWPDFYTNHAIVDNLCKGEKLKMAEDALK 603
Query: 290 WYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKEL 349
GC N + +L+ +C+ G A L + D ++++ L +
Sbjct: 604 HLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRN 663
Query: 350 RVEEAKELVE 359
++A++L E
Sbjct: 664 ETDKAEKLRE 673
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 98/221 (44%), Gaps = 4/221 (1%)
Query: 97 RLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHK 156
+L+ + + A +F ++ + ++ +F L+ + L + K
Sbjct: 60 KLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATI-LK 118
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
G +P+LV++NTII F G + A + +G D T+ TL+ G NG+
Sbjct: 119 SGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKA 178
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
A + + M +V+PN+ Y+A +DGL + AL L ++ + I D T+ +LI
Sbjct: 179 ALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLID 238
Query: 277 GFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKG 314
G + G +E + K + F +L+ +C++G
Sbjct: 239 GCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEG 279
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 88/201 (43%), Gaps = 3/201 (1%)
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
P ++ ++ A V G +A +L +++ KGI + TF L+ ++ A A +
Sbjct: 53 PPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSL 112
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
T++ +PN+ ++N ++G I KAL+ + ++ D FT+ LI G
Sbjct: 113 LATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSK 172
Query: 281 EGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAP 337
G ++ A KS N ++ L+ +C+ G + A LC + L+D
Sbjct: 173 NGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVT 232
Query: 338 LQLVVDRLAKELRVEEAKELV 358
++D R +E +L+
Sbjct: 233 YNSLIDGCCSVGRWQEVTQLL 253
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 59/149 (39%), Gaps = 33/149 (22%)
Query: 110 NARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE--------VDGLFKD--------- 152
+ +++ DEM V+++N LL A ++ FD+ V+G++ D
Sbjct: 528 HVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPDFYTNHAIVD 587
Query: 153 --------------LPHKL--GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRL 196
L H L G P++ +Y +I A GS A LL +ME
Sbjct: 588 NLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPP 647
Query: 197 DLITFNTLLLGFYSNGRFADAEKIWETMV 225
D ITF ++ AEK+ E M+
Sbjct: 648 DAITFEIIIGVLLQRNETDKAEKLREEMI 676
>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
Length = 735
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 128/288 (44%), Gaps = 41/288 (14%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEP-------- 161
A ++ D M + T+++ NAL+ G C+N K D V L D + G +P
Sbjct: 161 ALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAV--LLIDRMVETGFQPNEVTYGPV 218
Query: 162 ---------------------------DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGI 194
D V Y+ II GSLD+A L EME KG
Sbjct: 219 LKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGF 278
Query: 195 RLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALE 254
+ D+I + TL+ GF GR+ D K+ M+ + P+V +++A +D E + ++A E
Sbjct: 279 KADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEE 338
Query: 255 LVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVC 311
L EM + I+PD T+ +LI GF E L++A + GCG N F +L+ C
Sbjct: 339 LHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYC 398
Query: 312 EKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ +D L ++ + D ++ + ++E AKEL +
Sbjct: 399 KANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQ 446
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 130/260 (50%), Gaps = 10/260 (3%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K +NA +F+EM + + ++ + L+ + ++D+ L +D+ K I PD+
Sbjct: 259 KDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI-KRKITPDV 317
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
V+++ +I FV +G L A L EM ++GI D +T+ +L+ GF + A + +
Sbjct: 318 VAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDL 377
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
MV+ PN+R++N ++G LEL +M + + D T+ LI+GF G
Sbjct: 378 MVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 437
Query: 284 LEEAKRWYNKSGCGMNKAI------FKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAP 337
LE AK + + +++ + +K+L+ +C+ G+ + A + ++ + +D
Sbjct: 438 LEVAKELFQEM---VSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGI 494
Query: 338 LQLVVDRLAKELRVEEAKEL 357
+++ + +V++A +L
Sbjct: 495 YNIIIHGMCNASKVDDAWDL 514
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 136/297 (45%), Gaps = 10/297 (3%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFT-ARLIALYGKAAMFENARKVFDEM 118
++ + + R EE+ + Q + IS + T LI + K + A + D M
Sbjct: 320 FSALIDCFVKEGKLREAEELHKEMIQ-RGISPDTVTYTSLIDGFCKENQLDKANHMLDLM 378
Query: 119 PGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGS 178
+ C + +FN L+ + D+ LF+ + + G+ D V+YNT+I+ F + G
Sbjct: 379 VSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLR-GVVADTVTYNTLIQGFCELGK 437
Query: 179 LDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNA 238
L+ A L EM + +R D++++ LL G NG A +I+E + + ++ YN
Sbjct: 438 LEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNI 497
Query: 239 RLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SG 295
+ G+ + A +L + K + PDV T+ +I G +G+L EA + K G
Sbjct: 498 IIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDG 557
Query: 296 CGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERC--LVDQAPLQLVVDRLAKELR 350
N + +L+ +GD + L + +RC VD + L+ + LA+ L+
Sbjct: 558 HSPNGCTYNILIRAHLGEGDATKSAKLIEEI--KRCGFSVDASTLRFALSTLARMLK 612
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 119/265 (44%), Gaps = 4/265 (1%)
Query: 96 ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPH 155
+RL ++ + ++ + +M + + + + ++ C +K +
Sbjct: 76 SRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKII- 134
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
KLG EPD V+++T+I +G + A L+ M + G + LIT N L+ G NG+ +
Sbjct: 135 KLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVS 194
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
DA + + MV +PN +Y L + QT A+EL+ +M ++I D + +I
Sbjct: 195 DAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIII 254
Query: 276 KGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCL 332
G +G+L+ A +N+ G + I+ L+ C G D L + +
Sbjct: 255 DGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKIT 314
Query: 333 VDQAPLQLVVDRLAKELRVEEAKEL 357
D ++D KE ++ EA+EL
Sbjct: 315 PDVVAFSALIDCFVKEGKLREAEEL 339
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 82/176 (46%), Gaps = 16/176 (9%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
E A ++F+++ E + +N ++ N+ K D+ LF LP K G++PD+ +YN
Sbjct: 474 EKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK-GVKPDVKTYNI 532
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
+I KGSL A+ L +ME+ G + T+N L+ G + K+ E +
Sbjct: 533 MIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEI---- 588
Query: 229 VRPNVRSYNARLDGLAIEKQTKK-ALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
+ G +++ T + AL + M PDVFTF L++ F E N
Sbjct: 589 ----------KRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEEN 634
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 92/230 (40%), Gaps = 28/230 (12%)
Query: 76 IEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLG 135
I E +E K DI G +I A+ ++A +F +P + + V ++N ++G
Sbjct: 479 IFEKIEKSKMELDI---GIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIG 535
Query: 136 ACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAF---------------------- 173
E D LF+ + G P+ +YN +I+A
Sbjct: 536 GLCKKGSLSEADLLFRKMEED-GHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFS 594
Query: 174 VDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFY--SNGRFADAEKIWETMVNMNVRP 231
VD +L A + L M K G D+ TF TLL F N DA +++ M M +P
Sbjct: 595 VDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKP 654
Query: 232 NVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
NV +YN + GL + ++ +M + P+ T I G +
Sbjct: 655 NVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQ 704
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 98/220 (44%), Gaps = 5/220 (2%)
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLD 197
V+ K+ D VD LF+++ P L+ ++ + D L +ME KGI +
Sbjct: 49 VDIKEDDAVD-LFQEMTRSRP-RPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHN 106
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
L T + ++ + + A ++ + P+ +++ ++GL +E + +ALELV
Sbjct: 107 LYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVD 166
Query: 258 EMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKG 314
M P + T AL+ G G + +A ++ +G N+ + ++ +C+ G
Sbjct: 167 RMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSG 226
Query: 315 DLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA 354
A L ++ + +D +++D L K+ ++ A
Sbjct: 227 QTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNA 266
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 58/117 (49%), Gaps = 4/117 (3%)
Query: 156 KLGIEPDLVSYNTIIKAFV--DKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
K G EPD+ ++ T+++ F + S+ A TL M+ G + +++T+NT++ G +
Sbjct: 612 KAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNM 671
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
+ + + M +PN + + + GL + A+ L+ +M + N DV T
Sbjct: 672 ISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQDLHGSAILLLRKMEND--NEDVTT 726
Score = 38.1 bits (87), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 54/108 (50%), Gaps = 5/108 (4%)
Query: 124 EQTVLSFNALLGA-CV--NSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLD 180
E V +F LL C+ N+ +D LFK++ +G +P++V+YNT+IK ++ +
Sbjct: 616 EPDVFTFTTLLRPFCLEENASVYD-APTLFKNM-KAMGYKPNVVTYNTVIKGLLNGNMIS 673
Query: 181 SANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
+L +M ++G + + +T +T + G A + M N N
Sbjct: 674 QVPGVLDQMFERGCQPNAVTKSTFISGLCKQDLHGSAILLLRKMENDN 721
>gi|296081012|emb|CBI18516.3| unnamed protein product [Vitis vinifera]
Length = 967
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 136/285 (47%), Gaps = 20/285 (7%)
Query: 57 TGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTAR----------------LIA 100
T +Y T L A+ + + IL H Q SK F A LI
Sbjct: 112 THMYCLTAHILVKARMYDSAKSILRHLCQMGIGSKSIFGALMDTYPLCNSIPSVFDLLIR 171
Query: 101 LYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIE 160
+Y K M + A + F+ + + +V + N +L + V K+ + V LF+++ K GI
Sbjct: 172 VYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDK-GIC 230
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
P++ ++N +I +G+L A LL +ME+ G ++T+NTLL + GR+ A ++
Sbjct: 231 PNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIEL 290
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
+ M+ + +V +YN +D L ++ KA L+ +MR + I+P+ T+ LI GFV
Sbjct: 291 IDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVK 350
Query: 281 EGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
EG + A + +N K N + L+ C GD + A L
Sbjct: 351 EGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRL 395
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 133/339 (39%), Gaps = 36/339 (10%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQK-- 84
+I G+ E NLK+ + K+ + G F Y + R++ E++++
Sbjct: 239 LINGLCVEGNLKKAGNLLKQMEENG-FVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICK 297
Query: 85 --QYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKK 142
+ + F L + A + +K+ EM N +++N L+ V K
Sbjct: 298 GIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPN----EVTYNTLINGFVKEGK 353
Query: 143 FDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRL------ 196
+F ++ K + P+ V+YN +I G + A LL ME G+RL
Sbjct: 354 IGVAAQVFNEMS-KFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEHGNV 412
Query: 197 -----------------DLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNAR 239
D T N L+ +G+ +AEK M + + PN +Y+
Sbjct: 413 TEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCI 472
Query: 240 LDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSG---C 296
++G A +M +P FT+ +L+KG GNL EAK++ N+
Sbjct: 473 INGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPG 532
Query: 297 GMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQ 335
++ ++ L+ C+ G+L A L + L D
Sbjct: 533 AVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDS 571
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 97/241 (40%), Gaps = 17/241 (7%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHK 156
L+A K+ A +FD+M N ++++LL G C K V LF +
Sbjct: 542 LLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAV-CLFGTAMGR 600
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
+ P+ V Y ++ G +A EM KKG D + FN ++ G+
Sbjct: 601 GTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMK 660
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
A + TM V PN+ +YN L G + ++ + L L M + I PD TF++LI
Sbjct: 661 ANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLIL 720
Query: 277 GFVNEGNLEEAKRWYNK---------------SGCGMNKAIFKLLVPFVCEKGDLDFAFN 321
G G + + K +G A + L+ +C GD+ AF
Sbjct: 721 GLSKSGIPDLGVKLLGKMIMEESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFK 780
Query: 322 L 322
L
Sbjct: 781 L 781
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 92/204 (45%), Gaps = 8/204 (3%)
Query: 89 ISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSK-KFDEVD 147
+SK G + L GK M E + V EM E V+ +A +N + ++
Sbjct: 722 LSKSGIPDLGVKLLGKMIM-EESTVVLHEM----LENGVIPKHAQYITLINGMCRVGDIQ 776
Query: 148 GLFK--DLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
G FK D LG V+ + +++ + G + A +L M + + + TF TL+
Sbjct: 777 GAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLM 836
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEIN 265
F + + A+A K+ M ++ +V +YN + G+ + A EL EMR +++
Sbjct: 837 HRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLC 896
Query: 266 PDVFTFYALIKGFVNEGNLEEAKR 289
P++ T+ L+ NL + ++
Sbjct: 897 PNITTYAVLVDAISAANNLIQGEK 920
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 84/174 (48%), Gaps = 1/174 (0%)
Query: 89 ISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDG 148
I K LI + + A K+ DEM ++ +A++ ++ K ++
Sbjct: 756 IPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAM- 814
Query: 149 LFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
L D ++ + P + ++ T++ F + A L ME G++LD++ +N L++G
Sbjct: 815 LVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGM 874
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
+NG A A +++E M + ++ PN+ +Y +D ++ + +L+ +++ +
Sbjct: 875 CANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQER 928
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 61/133 (45%), Gaps = 1/133 (0%)
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
K G P +Y +++K G+L A L + +D + +NTLL +G
Sbjct: 494 KCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLH 553
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG-EMRSKEINPDVFTFYAL 274
+A +++ MV NV P+ +Y++ L GL + + A+ L G M + P+ + L
Sbjct: 554 EAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCL 613
Query: 275 IKGFVNEGNLEEA 287
+ G G+ + A
Sbjct: 614 VDGLSKAGHPKAA 626
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 55/134 (41%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ P Y T+I G + A L EME G + + ++ G G+ DA
Sbjct: 754 GVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDA 813
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ + M+ M + P + ++ + + + +AL+L G M + DV + LI G
Sbjct: 814 MLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMG 873
Query: 278 FVNEGNLEEAKRWY 291
G+ A Y
Sbjct: 874 MCANGDSAAAFELY 887
>gi|255660866|gb|ACU25602.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
Length = 484
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 129/285 (45%), Gaps = 34/285 (11%)
Query: 73 FRWIEE--ILEHQKQYK---------------------DISKEGFT------ARLIALYG 103
FRW+E + EH ++ D+ K+G +I YG
Sbjct: 32 FRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYG 91
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K + + + K+F +M E+T+ S+NAL + ++ F + + GIEP
Sbjct: 92 KEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSE-GIEPTR 150
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
++N +I F G +++AN +M+ + I D++T+NT++ G+Y + +AEK +
Sbjct: 151 HTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVE 210
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M N+ P V +Y + G Q AL LV EM+ I P+ T+ L+ G N
Sbjct: 211 MKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNTITYSTLLPGLCNAEK 270
Query: 284 LEEA----KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCK 324
+ EA K +K + +IF L+ C+ G+ D A ++ K
Sbjct: 271 MSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNPDAAADVLK 315
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 75/162 (46%), Gaps = 10/162 (6%)
Query: 90 SKEGFTARLIALYGKAAMFENARKVFDEM--------PGRNCEQTVLSFNALLGACVNSK 141
++ G LI + K ++ A K+ D++ P ++N ++ N+
Sbjct: 324 TEAGHYGXLIXNFCKVGQYDKAVKLLDKLIEKDIILRPQSTLHLEPSAYNPMIEYLCNNG 383
Query: 142 KFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITF 201
+ + + L + L KLG++ D + NT+I+ +GS DSA LL M ++ + + +
Sbjct: 384 QAXKAETLVRQL-XKLGVQ-DPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAY 441
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
N+L+ + DA+ ++M+ + P+ + + ++ L
Sbjct: 442 NSLVQSYLKKNEPXDAKAALDSMIENDHLPDSALFRSVMESL 483
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 99/250 (39%), Gaps = 17/250 (6%)
Query: 39 RLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEIL-EHQKQYKDISKEGFTAR 97
RLV++ K + NT Y+ + L NA++ IL E +Y + R
Sbjct: 241 RLVEEMKGFG----IKPNTITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMR 296
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHK- 156
LI+ + K+ + A V M + + L+ ++D+ L L K
Sbjct: 297 LISSHCKSGNPDAAADVLKAMIRLSVPTEAGHYGXLIXNFCKVGQYDKAVKLLDKLIEKD 356
Query: 157 --------LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
L +EP +YN +I+ + G A TL+ ++ K G++ D NTL+ G
Sbjct: 357 IILRPQSTLHLEPS--AYNPMIEYLCNNGQAXKAETLVRQLXKLGVQ-DPTALNTLIRGH 413
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDV 268
G A ++ + M+ V +YN+ + + + A + M + PD
Sbjct: 414 SQEGSPDSAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPXDAKAALDSMIENDHLPDS 473
Query: 269 FTFYALIKGF 278
F ++++
Sbjct: 474 ALFRSVMESL 483
>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
Length = 700
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 110/215 (51%), Gaps = 2/215 (0%)
Query: 79 ILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACV 138
++E +K D S E F LI YG A E V +M + + V+SF +++ A
Sbjct: 427 VMEMEKSGVDPSVETFNT-LIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFC 485
Query: 139 NSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL 198
+ K E + D+ +K + P+ YN+II A+++ G + A L+ +M+ G+ +
Sbjct: 486 KNGKIPEAVAILDDMIYK-DVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASI 544
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
+T+N LL G + + +AE++ T+ N +RP+V SYN + + T KALEL+ E
Sbjct: 545 VTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQE 604
Query: 259 MRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK 293
M I P + T++ L+ + G + + + Y +
Sbjct: 605 MNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQ 639
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 132/270 (48%), Gaps = 6/270 (2%)
Query: 58 GIYTGTV--QRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVF 115
G YT ++ L + E++LE + LI Y + A +F
Sbjct: 333 GAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIF 392
Query: 116 DEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVD 175
++M R+ +++NAL+ + + + L ++ K G++P + ++NT+I A+
Sbjct: 393 EQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEM-EKSGVDPSVETFNTLIDAYGT 451
Query: 176 KGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRS 235
G L+ T+L +M++KGI+ D+I+F +++ F NG+ +A I + M+ +V PN +
Sbjct: 452 AGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQV 511
Query: 236 YNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW-YNKS 294
YN+ +D T++A LV +M++ ++ + T+ L+KG ++EA+ Y
Sbjct: 512 YNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLR 571
Query: 295 GCGMNKAI--FKLLVPFVCEKGDLDFAFNL 322
G+ + + ++ C KGD D A L
Sbjct: 572 NQGLRPDVVSYNTIISACCNKGDTDKALEL 601
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 91/180 (50%), Gaps = 2/180 (1%)
Query: 86 YKDISKEG-FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
YKD++ +I Y ++ E A + ++M +++++N LL S + D
Sbjct: 502 YKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQID 561
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
E + L L ++ G+ PD+VSYNTII A +KG D A LL EM K GIR L T++TL
Sbjct: 562 EAEELIYTLRNQ-GLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTL 620
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+ S GR D E +++ M++ NV P+ Y +D + K L EM K I
Sbjct: 621 VSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGI 680
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 102/229 (44%), Gaps = 4/229 (1%)
Query: 133 LLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKK 192
LL K + + + + L H G+ P V YNT+I + L A + +M+ +
Sbjct: 340 LLNGLCKDGKVAKAEQVLEMLVHT-GLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSR 398
Query: 193 GIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKA 252
IR D IT+N L+ G AE + M V P+V ++N +D Q +K
Sbjct: 399 HIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKC 458
Query: 253 LELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPF 309
++ +M+ K I DV +F +++K F G + EA + N ++ ++
Sbjct: 459 FTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDA 518
Query: 310 VCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
E GD + AF L ++ + L++ L + +++EA+EL+
Sbjct: 519 YIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELI 567
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 109/233 (46%), Gaps = 4/233 (1%)
Query: 129 SFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
S+N ++ S K + +F ++ +G+ P+ ++YNT+I V G L++ L +
Sbjct: 196 SYNVVIAGLWRSGKGSDALKVFDEMV-DMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQ 254
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
M G + +++T+N LL G GR + + + M + ++ P+ +Y+ DGL +
Sbjct: 255 MLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGE 314
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKL 305
++ L L E K + +T L+ G +G + +A++ +G I+
Sbjct: 315 SRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNT 374
Query: 306 LVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
L+ C+ DL AF + ++ S D +++ L K V +A++LV
Sbjct: 375 LINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLV 427
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 99/208 (47%), Gaps = 5/208 (2%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKK--GIRLDLITFNTLLLGFYSNGRFA 215
G PD ++N +++A V G LD A ++ M + D ++N ++ G + +G+ +
Sbjct: 152 GARPDTFAWNKVVQACVAAGDLDVALAMVRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGS 211
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
DA K+++ MV+M V PN +YN +DG + L +M P++ T+ L+
Sbjct: 212 DALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLL 271
Query: 276 KGFVNEGNLEEAKRWYNKSGCGM---NKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCL 332
G G ++E + ++ + + +L + G+ +L + + +
Sbjct: 272 SGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVM 331
Query: 333 VDQAPLQLVVDRLAKELRVEEAKELVEL 360
+ ++++ L K+ +V +A++++E+
Sbjct: 332 LGAYTCSILLNGLCKDGKVAKAEQVLEM 359
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 74/174 (42%), Gaps = 1/174 (0%)
Query: 110 NARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEP-DLVSYNT 168
+ R F + ++N ++ ACV + D + + + G P D SYN
Sbjct: 140 DVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAMVRRMGRSEGAPPPDAFSYNV 199
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
+I G A + EM G+ + IT+NT++ G G ++ + M++
Sbjct: 200 VIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDG 259
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEG 282
+PN+ +YN L GL + + L+ EM S + PD FT+ L G G
Sbjct: 260 PKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTG 313
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 93/224 (41%), Gaps = 36/224 (16%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I + K E ++ D+M + ++++N LL + + DE L ++
Sbjct: 235 MIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASH- 293
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
+ PD +Y+ + G + +L E KKG+ L T + LL G +G+ A A
Sbjct: 294 SMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKA 353
Query: 218 EKIWETMVNM-----------------------------------NVRPNVRSYNARLDG 242
E++ E +V+ ++RP+ +YNA ++G
Sbjct: 354 EQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALING 413
Query: 243 LAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEE 286
L + KA +LV EM ++P V TF LI + G LE+
Sbjct: 414 LCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEK 457
>gi|297837133|ref|XP_002886448.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
lyrata]
gi|297332289|gb|EFH62707.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
lyrata]
Length = 332
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 124/264 (46%), Gaps = 37/264 (14%)
Query: 25 GSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQK 84
G+++ G+ K + ++ +K D + + IYT + RL
Sbjct: 49 GTIVNGMCKMGDTDSALNLLRKM-DESHIKADVVIYTAIIDRLC---------------- 91
Query: 85 QYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
K+G ++ A+ +F EM + VL++N ++ C + K+
Sbjct: 92 ------KDGHHSK-------------AQNLFTEMHDKGIFPNVLTYNCMIDGCCSYGKWT 132
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
+ + L +D+ ++PD+V++N +I AFV +G + A L EM + I D IT+N+L
Sbjct: 133 DAEQLLRDMIES-NVDPDVVTFNALINAFVKEGKISEAEELYREMLGRNIFPDTITYNSL 191
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+ GF + R DA+ I++ MV+ PNV + N + G K+ ++L+ EM + +
Sbjct: 192 IDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGGCCRAKRVDDGIKLLHEMLRRGL 251
Query: 265 NPDVFTFYALIKGFVNEGNLEEAK 288
PD ++ LI GF G+L A+
Sbjct: 252 VPDSVSYNTLIHGFCQAGDLNAAQ 275
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 89/174 (51%), Gaps = 1/174 (0%)
Query: 118 MPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKG 177
M + C+ V++FN L+ + E + L + G +P+ V+Y TI+ G
Sbjct: 1 MVEKGCQHDVVAFNTLMNGLCREGRVLEAEALVDRMVEN-GHQPNEVTYGTIVNGMCKMG 59
Query: 178 SLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYN 237
DSA LL +M++ I+ D++ + ++ +G + A+ ++ M + + PNV +YN
Sbjct: 60 DTDSALNLLRKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYN 119
Query: 238 ARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY 291
+DG + A +L+ +M ++PDV TF ALI FV EG + EA+ Y
Sbjct: 120 CMIDGCCSYGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELY 173
>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 155/343 (45%), Gaps = 9/343 (2%)
Query: 25 GSVIRGIYKENN----LKRLVDKFKKSSDLG-RFRTNTGIYTGTVQRLANAKRFRWIEEI 79
G++++G+ + N LK + SS G F+ Y+ + L +R ++
Sbjct: 205 GTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDL 264
Query: 80 LEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
E K LI + +E A+++F+EM + + V++FN L+
Sbjct: 265 FEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCK 324
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
K E L + + + GI P+L++YN++I+ F G L+SA L M KG D+I
Sbjct: 325 EGKVIEAKDLLEVMIQR-GIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVI 383
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
+ L+ G+ + +A K++ M+ + RP+V++Y A L GL + A +L G M
Sbjct: 384 CYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVM 443
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDL 316
+ I D++ + + G G L EA +NK ++ F L+ +C+ G L
Sbjct: 444 KVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKL 503
Query: 317 DFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ A+ L ++ E D +++ + +V +A L +
Sbjct: 504 ETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQ 546
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 109/230 (47%), Gaps = 10/230 (4%)
Query: 96 ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPH 155
L++ K + ++++M + N LL N + E + +
Sbjct: 100 THLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILR 159
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
+ G PD+V+Y T+IK + + A L M+K G + IT+ TL+ G G +
Sbjct: 160 R-GYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNIS 218
Query: 216 DAEKIWETMVN------MNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVF 269
A K+ + M+N +N +P V SY+ +D L +++ +A +L EM+ + + P V
Sbjct: 219 IALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVI 278
Query: 270 TFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDL 316
++ +LI GF G EEAKR +N+ G N F +L+ +C++G +
Sbjct: 279 SYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKV 328
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 81/190 (42%), Gaps = 1/190 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI Y K + E A K+++ M V ++ ALL K + LF +
Sbjct: 388 LINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVM-KVY 446
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
GI DL Y + G L A L +++ I+LD+ FN L+ G G+ A
Sbjct: 447 GIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETA 506
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+++E + ++P+V +YN + Q KA L +M PD T+ LI+G
Sbjct: 507 WELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRG 566
Query: 278 FVNEGNLEEA 287
F LE+
Sbjct: 567 FFESKKLEKV 576
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 71/137 (51%), Gaps = 4/137 (2%)
Query: 105 AAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLV 164
+FE A ++F+++ N + + FN L+ + K + LF+ LP + ++PD+V
Sbjct: 466 GCLFE-AMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQE-ELQPDVV 523
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
+YN +I F G + AN L +MEK G D IT+ TL+ GF+ + + ++ M
Sbjct: 524 TYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMM 583
Query: 225 VNMNVR--PNVRSYNAR 239
V +V N+ +N R
Sbjct: 584 VQRDVSLDVNILRHNRR 600
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 77/171 (45%), Gaps = 9/171 (5%)
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
L +F LL G ++ ++ M + P+ + N L+ L + + L ++
Sbjct: 96 LSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMA 155
Query: 258 EMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKG 314
+ + PD+ T+ LIKG E + +A + K GC N + L+ +C G
Sbjct: 156 GILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTG 215
Query: 315 DLDFAFNLCKRTFSERCL--VDQAPL----QLVVDRLAKELRVEEAKELVE 359
++ A L + ++ L ++ P+ +++D L K+ R +EA++L E
Sbjct: 216 NISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFE 266
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 53/133 (39%)
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
P L S+ ++ L +M GI D T N LL + R + +
Sbjct: 94 PPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAV 153
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
++ P++ +Y + GL +E + KA L M+ P+ T+ L+KG
Sbjct: 154 MAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCR 213
Query: 281 EGNLEEAKRWYNK 293
GN+ A + + +
Sbjct: 214 TGNISIALKLHQE 226
>gi|297737369|emb|CBI26570.3| unnamed protein product [Vitis vinifera]
Length = 1042
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 140/272 (51%), Gaps = 15/272 (5%)
Query: 96 ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPH 155
A ++++ GKA A ++F + TV +NA++G + +F +V L DL
Sbjct: 167 ATILSVLGKANQEALAVEIFARAEAAS-GNTVQVYNAMMGVYARTGRFTKVQELL-DLMR 224
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDS--ANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
G EPDLVS+NT+I A + G++ + A LL E+ + GI+ D+IT+NTL+
Sbjct: 225 SRGCEPDLVSFNTLINARLKSGTMVTNLAIELLNEVRRSGIQPDIITYNTLISACSRESN 284
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
+A K++ MV +P++ +YNA + +++A L ++ SK PD T+ +
Sbjct: 285 LEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNS 344
Query: 274 LIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSER 330
L+ F EGN+++ K K G G ++ + ++ ++G D AF L +S+
Sbjct: 345 LLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQL----YSDM 400
Query: 331 CLVDQAP----LQLVVDRLAKELRVEEAKELV 358
L ++P +++D L K ++EA E++
Sbjct: 401 KLSGRSPDAVTYTVLIDSLGKANMIKEAAEVM 432
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 132/268 (49%), Gaps = 10/268 (3%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL---GACVNSKKFDEVDGLFKDLP 154
LI+ + + E A KV+++M C+ + ++NA++ G C S+ E LFKDL
Sbjct: 275 LISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSR---EAGRLFKDLE 331
Query: 155 HKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRF 214
K G PD V+YN+++ AF +G++D + +M K G D +T+NT++ + G+
Sbjct: 332 SK-GFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQH 390
Query: 215 ADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYAL 274
A +++ M P+ +Y +D L K+A E++ EM + + P + TF AL
Sbjct: 391 DLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNARVKPTLRTFSAL 450
Query: 275 IKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERC 331
I G+ G EA+ ++ +SG + + +++ + + A L +
Sbjct: 451 ICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLRFNESGKAMKLYQEMVLHSF 510
Query: 332 LVDQAPLQLVVDRLAKELRVEEAKELVE 359
D A ++++ L KE R E+ ++V+
Sbjct: 511 KPDHALYEVMLRVLGKENREEDVHKVVK 538
Score = 44.3 bits (103), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 89/217 (41%), Gaps = 26/217 (11%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI GKA M + A +V EM + T+ +F+AL+ + K E + F D +
Sbjct: 415 LIDSLGKANMIKEAAEVMSEMLNARVKPTLRTFSALICGYAKAGKRVEAEETF-DCMLRS 473
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
GI+PD ++Y+ ++ + A L EM + D + +L R D
Sbjct: 474 GIKPDHLAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPDHALYEVMLRVLGKENREEDV 533
Query: 218 EKI---WETMVNMN--------VRPNVRSYNARLDGLAIEK-----QTKKAL-------- 253
K+ E + MN V+ + A + LAI + Q KA
Sbjct: 534 HKVVKDMEELCGMNSQVICSILVKGECFDHAANMLRLAISQGCELDQYGKARDFGLFCGT 593
Query: 254 -ELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
EL + SKE D ++ ++K F N GN +A++
Sbjct: 594 EELFEGLLSKECKLDRSFYHIMMKMFRNSGNHSKAEK 630
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 32/154 (20%), Positives = 70/154 (45%), Gaps = 12/154 (7%)
Query: 166 YNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMV 225
Y+ ++K F + G+ A LL M++ G+ + T + L++ + +G+ +AEK+ + +
Sbjct: 612 YHIMMKMFRNSGNHSKAEKLLGVMKEAGVEPTIATMHLLMVSYSGSGQPEEAEKVLDNLK 671
Query: 226 NMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLE 285
+ + Y++ +D A++ + EM+ + PD + + FV +L
Sbjct: 672 VEGLPLSTLPYSSVIDAYLKNGDHNVAIQKLMEMKKDGLEPD----HRIWTCFVRAASLS 727
Query: 286 EAKRWYNKSGCGMNKAI----FKLLVPFVCEKGD 315
+ + + KA+ F L + + EK D
Sbjct: 728 Q----HTSEAIVLLKALRDTGFDLPIRLLTEKSD 757
>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
Length = 667
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 94/389 (24%), Positives = 170/389 (43%), Gaps = 53/389 (13%)
Query: 25 GSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQK 84
G+++ G+ K + ++ +K ++ R + N IY+ + L R + + +
Sbjct: 216 GTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFS-EM 274
Query: 85 QYKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKF 143
Q K IS FT +I + + + A+++ EM R V++F+ L+ A V KF
Sbjct: 275 QEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKF 334
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSAN-------------------- 183
E + L+ ++ + GI P+ ++YN++I F + LD+A
Sbjct: 335 FEAEELYNEMLPR-GIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSI 393
Query: 184 ---------------TLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
LL+EM ++G+ + IT+ TL+ GF G A + + M++
Sbjct: 394 LIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSG 453
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK-----------EINPDVFTFYALIKG 277
V PNV + N LDGL + K ALE+ M+ ++ PDV T+ LI G
Sbjct: 454 VCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICG 513
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
+NEG EA+ Y + G + + ++ +C++ LD A + S+ D
Sbjct: 514 LINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPD 573
Query: 335 QAPLQLVVDRLAKELRVEEAKEL-VELGK 362
+++ K RV + E+ E+G+
Sbjct: 574 VVTFTTLINGYCKVGRVGDGLEVFCEMGR 602
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 126/280 (45%), Gaps = 50/280 (17%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I + K + A ++F M + C V++F+ L+ +K+ D+ L ++ +
Sbjct: 359 MIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRR- 417
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR---- 213
G+ + ++Y T+I F G+L++A LL EM G+ +++T NTLL G +NG+
Sbjct: 418 GLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDA 477
Query: 214 ------------------------------------------FADAEKIWETMVNMNVRP 231
F++AE+++E M + + P
Sbjct: 478 LEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVP 537
Query: 232 NVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY 291
+ +YN+ +DGL + + +A ++ M SK +PDV TF LI G+ G + + +
Sbjct: 538 DTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVF 597
Query: 292 ---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFS 328
+ G N ++ L+ C+ G+++ A ++ + S
Sbjct: 598 CEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMIS 637
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 130/284 (45%), Gaps = 15/284 (5%)
Query: 86 YKDISKEGFTARLIA----LYGKAA--MFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
+ I+K GF L+ L+G A F ++ C+ V++F L+
Sbjct: 134 FGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQI----CKPNVIAFTTLMNGLCR 189
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKG-IRLDL 198
+ E L + G++P+ ++Y TI+ G SA LL +ME+ I+ ++
Sbjct: 190 EGRVVEAVALLDRMVED-GLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNV 248
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
+ ++ ++ G + +GR DA+ ++ M + PN+ +YN ++G + +A L+ E
Sbjct: 249 VIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLRE 308
Query: 259 MRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGD 315
M ++++PDV TF LI V EG EA+ YN+ G N + ++ ++
Sbjct: 309 MFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNR 368
Query: 316 LDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
LD A + ++ C D +++D RV++ +L+
Sbjct: 369 LDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLH 412
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 84/169 (49%), Gaps = 1/169 (0%)
Query: 119 PGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGS 178
P + E V ++N L+ +N KF E + L++++PH+ G+ PD ++YN++I +
Sbjct: 496 PFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHR-GLVPDTITYNSVIDGLCKQSR 554
Query: 179 LDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNA 238
LD A + M KG D++TF TL+ G+ GR D +++ M + N +Y
Sbjct: 555 LDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRT 614
Query: 239 RLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+ G AL++ EM S + PD T ++ G ++ L+ A
Sbjct: 615 LIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRA 663
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 97/220 (44%), Gaps = 16/220 (7%)
Query: 84 KQYKDISKEGFTAR------LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGAC 137
K ++S+ G A LI + + A + EM V++ N LL
Sbjct: 409 KLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGL 468
Query: 138 VNSKKFDEVDGLFK---------DLPHKLG-IEPDLVSYNTIIKAFVDKGSLDSANTLLY 187
N+ K + +FK D H +EPD+ +YN +I +++G A L
Sbjct: 469 CNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYE 528
Query: 188 EMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEK 247
EM +G+ D IT+N+++ G R +A +++++M + P+V ++ ++G
Sbjct: 529 EMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVG 588
Query: 248 QTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+ LE+ EM + I + T+ LI GF GN+ A
Sbjct: 589 RVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGA 628
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 116/285 (40%), Gaps = 36/285 (12%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
++A +F M V+ F LLG V ++ D V L + + + I ++ S+
Sbjct: 57 LDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRR-IPCNIYSFT 115
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLG------------FYSN---- 211
+IK F L A + ++ K G L+TF+TLL G F+
Sbjct: 116 ILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQICKP 175
Query: 212 ---------------GRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELV 256
GR +A + + MV ++PN +Y +DG+ T AL L+
Sbjct: 176 NVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLL 235
Query: 257 GEMRS-KEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCE 312
+M I P+V + A+I G +G +A+ ++ + G N + ++ C
Sbjct: 236 RKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCS 295
Query: 313 KGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
G A L + F + D ++++ L KE + EA+EL
Sbjct: 296 SGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEEL 340
>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
Length = 552
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 163/366 (44%), Gaps = 24/366 (6%)
Query: 15 TATATGPKFI--GSVIRGIYKENNLK---RLVDKFKKSSDLGRFRTNTGIYTGTVQRLAN 69
A P+ I G +I+G+ KE ++ R+VD+ F +G+ + +
Sbjct: 163 AANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEM--------FMIESGLSPDVITFNSV 214
Query: 70 AKRFRWIEEILEHQKQYKDISKEGFT------ARLIALYGKAAMFENARKVFDEMPGRNC 123
+ IL+ +K + G + LI K A + A ++ +M C
Sbjct: 215 LDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGC 274
Query: 124 EQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSAN 183
++++ ++ + + ++ + + + G PD V+YNT+I F + L A
Sbjct: 275 RANTVTYSTVVDGLLKVGRMEDAVVVLRQM-RDAGCLPDAVTYNTLIDGFFKRQRLREAV 333
Query: 184 TLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
LL EM + G ++T+ TL G +GRF +A +I + M PN +Y++ +DGL
Sbjct: 334 GLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGL 393
Query: 244 AIEKQTKKALELVGEM-RSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMN 299
+ +AL +M R + + P V + ALI G G ++EA + + +G +
Sbjct: 394 CKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPD 453
Query: 300 KAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
F +L+ +C+ G +D L + C+ D +VDRL + RV+EA +L +
Sbjct: 454 VVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQ 513
Query: 360 LGKTNS 365
+++
Sbjct: 514 QMRSDG 519
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 122/274 (44%), Gaps = 8/274 (2%)
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
Y D+ G LI GK + A +F+E + C TV+++N ++ + +
Sbjct: 27 YPDVVTYG---ALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIEN 83
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
L+ D+ G P +V+Y+T+I +D LL EM +G + +T+NTL+
Sbjct: 84 ALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLV 143
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE-- 263
GR +A + E M P + ++ + GL E + + A +V EM E
Sbjct: 144 NALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESG 203
Query: 264 INPDVFTFYALIKGFVNEGNLEEAKRWYNKS---GCGMNKAIFKLLVPFVCEKGDLDFAF 320
++PDV TF +++ G E + +A + ++ GC N + L+ + + +D A
Sbjct: 204 LSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEAL 263
Query: 321 NLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA 354
L + C + VVD L K R+E+A
Sbjct: 264 QLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDA 297
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 151/336 (44%), Gaps = 6/336 (1%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
SV+ G+ KE + + FK++ + G R N Y+ + L+ + ++L +
Sbjct: 213 SVLDGLCKEQRILDAHNVFKRALERG-CRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVE 271
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
+ + ++ K E+A V +M C +++N L+ ++ E
Sbjct: 272 LGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLRE 331
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
GL +++ G P +V+Y T+ G D A +L M +G + IT+++++
Sbjct: 332 AVGLLREMLEA-GFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIV 390
Query: 206 LGFYSNGRFADAEKIWETMV-NMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
G GR +A +E M + V P+V +Y+A +DGL + +A E + M
Sbjct: 391 DGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGR 450
Query: 265 NPDVFTFYALIKGFVNEGNLE---EAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFN 321
PDV TF LI G + G ++ E R + GC + + LV +C +D AF+
Sbjct: 451 IPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFD 510
Query: 322 LCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
L ++ S+ D++ + ++ L + R E+AK +
Sbjct: 511 LFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDAKRI 546
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 112/229 (48%), Gaps = 8/229 (3%)
Query: 135 GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGI 194
G C S+K D+ LFK + K I PD+V+Y +I + + A L E KG
Sbjct: 4 GLC-KSRKVDKAITLFKQMVDK-AIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGC 61
Query: 195 RLDLITFNTLLLGFYSNGRFADAEKIWETM-VNMNVRPNVRSYNARLDGLAIEKQTKKAL 253
++T+NT++ G GR +A +++ M ++ RP V +Y+ +DGL + + K
Sbjct: 62 HPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGC 121
Query: 254 ELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFV 310
+L+ EM + P+ T+ L+ + +G +EA + +GC F L++ +
Sbjct: 122 KLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGL 181
Query: 311 CEKGDLDFAFNLCKRTFS-ERCLV-DQAPLQLVVDRLAKELRVEEAKEL 357
C++G+++ AF + F E L D V+D L KE R+ +A +
Sbjct: 182 CKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNV 230
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 4/195 (2%)
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
+I +D A TL +M K I D++T+ L+ G R +A ++E
Sbjct: 1 MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK-EINPDVFTFYALIKGFVNEGNLEEA 287
P V +YN +DGL + + AL L +M P V T+ LI G + +++
Sbjct: 61 CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120
Query: 288 KRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDR 344
+ + GC N + LV + +G AF+L ++ + C + L++
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180
Query: 345 LAKELRVEEAKELVE 359
L KE +E A +V+
Sbjct: 181 LCKEGEIEAAFRVVD 195
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 106/269 (39%), Gaps = 38/269 (14%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I G +K L+ V ++ + G F + YT L + RF EIL++
Sbjct: 318 TLIDGFFKRQRLREAVGLLREMLEAG-FHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAA 376
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMP-GRNCEQTVLSFNALLGACVNSKKFD 144
+ ++ KA A F++M V++++AL+ + K D
Sbjct: 377 RGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKID 436
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
E + + + G PD+V+++ +I D G +D+ L M ++G D++T+ TL
Sbjct: 437 EAYEFLERMI-RAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATL 495
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+D L + +A +L +MRS +
Sbjct: 496 -----------------------------------VDRLCRASRVDEAFDLFQQMRSDGL 520
Query: 265 NPDVFTFYALIKGFVNEGNLEEAKRWYNK 293
+PD T +I G + E+AKR ++
Sbjct: 521 SPDRSTRRTMIHGLLEVNRDEDAKRIQDE 549
>gi|410109945|gb|AFV61052.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rubella]
Length = 394
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 134/273 (49%), Gaps = 26/273 (9%)
Query: 66 RLANAKRFRWI-----EEILEHQKQ----------YKDISKEGFTARL------IALYGK 104
RL +F W+ ++LEH + YK+I + G+ A L + + K
Sbjct: 78 RLTREHKF-WVPFDTCRKVLEHLMKLKYFKLVWGFYKEILESGYPASLYFFNILMHRFCK 136
Query: 105 AAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLV 164
A+ VFD + +V+S+N L+ + DE L K H G++PD+
Sbjct: 137 ERDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL-KSAMHASGVQPDVY 195
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
+Y+ +I + +D AN L EM KG+ + +TF TL+ G NGR A +I++ M
Sbjct: 196 TYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLALEIYKQM 255
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
++ ++ P++ +YN + GL + K+A +L+ EM K + PD T+ ALI G EG+L
Sbjct: 256 LSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTALIDGCCKEGDL 315
Query: 285 E---EAKRWYNKSGCGMNKAIFKLLVPFVCEKG 314
+ E ++ + ++ + L+ +C++G
Sbjct: 316 DTAFEHRKRMIQENIRLDDVAYTALISGLCQEG 348
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 71/140 (50%), Gaps = 1/140 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K + A +++ +M ++ ++++N L+ + L ++ K
Sbjct: 235 LIDGHCKNGRVDLALEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMK- 293
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD ++Y +I +G LD+A M ++ IRLD + + L+ G GR DA
Sbjct: 294 GLKPDKITYTALIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDA 353
Query: 218 EKIWETMVNMNVRPNVRSYN 237
EK+ M+++ ++P+ R+Y
Sbjct: 354 EKMLREMLSVGLKPDARTYT 373
>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 128/288 (44%), Gaps = 41/288 (14%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEP-------- 161
A ++ D M + T+++ NAL+ G C+N K D V L D + G +P
Sbjct: 161 ALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAV--LLIDRMVETGFQPNEVTYGPV 218
Query: 162 ---------------------------DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGI 194
D V Y+ II GSLD+A L EME KG
Sbjct: 219 LKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGF 278
Query: 195 RLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALE 254
+ D+I + TL+ GF GR+ D K+ M+ + P+V +++A +D E + ++A E
Sbjct: 279 KADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEE 338
Query: 255 LVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVC 311
L EM + I+PD T+ +LI GF E L++A + GCG N F +L+ C
Sbjct: 339 LHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYC 398
Query: 312 EKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ +D L ++ + D ++ + ++E AKEL +
Sbjct: 399 KANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQ 446
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 136/293 (46%), Gaps = 10/293 (3%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFT-ARLIALYGKAAMFENARKVFDEM 118
++ + + R EE+ + Q + IS + T LI + K + A + D M
Sbjct: 320 FSALIDCFVKEGKLREAEELHKEMIQ-RGISPDTVTYTSLIDGFCKENQLDKANHMLDLM 378
Query: 119 PGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGS 178
+ C + +FN L+ + D+ LF+ + + G+ D V+YNT+I+ F + G
Sbjct: 379 VSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLR-GVVADTVTYNTLIQGFCELGK 437
Query: 179 LDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNA 238
L+ A L EM + +R D++++ LL G NG A +I+E + + ++ YN
Sbjct: 438 LEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNI 497
Query: 239 RLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SG 295
+ G+ + A +L + K + PDV T+ +I G +G+L EA + K G
Sbjct: 498 IIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDG 557
Query: 296 CGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERC--LVDQAPLQLVVDRLA 346
N + +L+ +GD + L + +RC VD + +++VVD L+
Sbjct: 558 HSPNGCTYNILIRAHLGEGDATKSAKLIEEI--KRCGFSVDASTVKMVVDMLS 608
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 130/260 (50%), Gaps = 10/260 (3%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K +NA +F+EM + + ++ + L+ + ++D+ L +D+ + I PD+
Sbjct: 259 KDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKR-KITPDV 317
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
V+++ +I FV +G L A L EM ++GI D +T+ +L+ GF + A + +
Sbjct: 318 VAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDL 377
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
MV+ PN+R++N ++G LEL +M + + D T+ LI+GF G
Sbjct: 378 MVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 437
Query: 284 LEEAKRWYNKSGCGMNKAI------FKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAP 337
LE AK + + +++ + +K+L+ +C+ G+ + A + ++ + +D
Sbjct: 438 LEVAKELFQEM---VSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGI 494
Query: 338 LQLVVDRLAKELRVEEAKEL 357
+++ + +V++A +L
Sbjct: 495 YNIIIHGMCNASKVDDAWDL 514
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 119/265 (44%), Gaps = 4/265 (1%)
Query: 96 ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPH 155
+RL ++ + ++ + +M + + + + ++ C +K +
Sbjct: 76 SRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKII- 134
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
KLG EPD V+++T+I +G + A L+ M + G + LIT N L+ G NG+ +
Sbjct: 135 KLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVS 194
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
DA + + MV +PN +Y L + QT A+EL+ +M ++I D + +I
Sbjct: 195 DAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIII 254
Query: 276 KGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCL 332
G +G+L+ A +N+ G + I+ L+ C G D L + +
Sbjct: 255 DGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKIT 314
Query: 333 VDQAPLQLVVDRLAKELRVEEAKEL 357
D ++D KE ++ EA+EL
Sbjct: 315 PDVVAFSALIDCFVKEGKLREAEEL 339
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 98/220 (44%), Gaps = 5/220 (2%)
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLD 197
V+ K+ D VD LF+++ P L+ ++ + D L +ME KGI +
Sbjct: 49 VDIKEDDAVD-LFQEMTRSRP-RPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHN 106
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
L T + ++ + + A ++ + P+ +++ ++GL +E + +ALELV
Sbjct: 107 LYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVD 166
Query: 258 EMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKG 314
M P + T AL+ G G + +A ++ +G N+ + ++ +C+ G
Sbjct: 167 RMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSG 226
Query: 315 DLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA 354
A L ++ + +D +++D L K+ ++ A
Sbjct: 227 QTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNA 266
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 71/148 (47%), Gaps = 1/148 (0%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
E A ++F+++ E + +N ++ N+ K D+ LF LP K G++PD+ +YN
Sbjct: 474 EKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK-GVKPDVKTYNI 532
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
+I KGSL A+ L +ME+ G + T+N L+ G + K+ E +
Sbjct: 533 MIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCG 592
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELV 256
+ + +D L+ + K L+++
Sbjct: 593 FSVDASTVKMVVDMLSDGRLKKSFLDML 620
>gi|359490016|ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Vitis vinifera]
Length = 1442
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 140/272 (51%), Gaps = 15/272 (5%)
Query: 96 ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPH 155
A ++++ GKA A ++F + TV +NA++G + +F +V L DL
Sbjct: 192 ATILSVLGKANQEALAVEIFARAEAASG-NTVQVYNAMMGVYARTGRFTKVQELL-DLMR 249
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSL--DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
G EPDLVS+NT+I A + G++ + A LL E+ + GI+ D+IT+NTL+
Sbjct: 250 SRGCEPDLVSFNTLINARLKSGTMVTNLAIELLNEVRRSGIQPDIITYNTLISACSRESN 309
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
+A K++ MV +P++ +YNA + +++A L ++ SK PD T+ +
Sbjct: 310 LEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNS 369
Query: 274 LIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSER 330
L+ F EGN+++ K K G G ++ + ++ ++G D AF L +S+
Sbjct: 370 LLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQL----YSDM 425
Query: 331 CLVDQAP----LQLVVDRLAKELRVEEAKELV 358
L ++P +++D L K ++EA E++
Sbjct: 426 KLSGRSPDAVTYTVLIDSLGKANMIKEAAEVM 457
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 132/268 (49%), Gaps = 10/268 (3%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL---GACVNSKKFDEVDGLFKDLP 154
LI+ + + E A KV+++M C+ + ++NA++ G C S+ E LFKDL
Sbjct: 300 LISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSR---EAGRLFKDLE 356
Query: 155 HKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRF 214
K G PD V+YN+++ AF +G++D + +M K G D +T+NT++ + G+
Sbjct: 357 SK-GFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQH 415
Query: 215 ADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYAL 274
A +++ M P+ +Y +D L K+A E++ EM + + P + TF AL
Sbjct: 416 DLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNARVKPTLRTFSAL 475
Query: 275 IKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERC 331
I G+ G EA+ ++ +SG + + +++ + + A L +
Sbjct: 476 ICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLRFNESGKAMKLYQEMVLHSF 535
Query: 332 LVDQAPLQLVVDRLAKELRVEEAKELVE 359
D A ++++ L KE R E+ ++V+
Sbjct: 536 KPDHALYEVMLRVLGKENREEDVHKVVK 563
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/308 (17%), Positives = 125/308 (40%), Gaps = 39/308 (12%)
Query: 46 KSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKA 105
++ + G + I+TG ++ K ++ E ++ +Q + LI Y +
Sbjct: 736 QAEEKGLLFDDVSIHTGVIEAYGKLKLWQKAESLVGSLRQKCTMVDRKVWNALIHAYAAS 795
Query: 106 AMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVS 165
+E AR +F+ M TV S N L+ A + + DE+ + ++L +G + S
Sbjct: 796 GCYERARAIFNTMMRDGPSPTVDSVNGLMQALIVDGRLDELYVVIQEL-QDMGFKISKSS 854
Query: 166 YNTIIKAFVDKGSL-----------------------------------DSANTLLYEME 190
++ AF G++ ++ EME
Sbjct: 855 ITLMLDAFAHAGNIFEVKKIYQGMKAAGYFPTMHLYRIMIGLLAKGKRVRDVEAMVSEME 914
Query: 191 KKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTK 250
+ DL +N++L + G F ++++ + ++P+ +YN + +++ +
Sbjct: 915 VARFKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPE 974
Query: 251 KALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLV 307
+ L L+ EMR + P + T+ +LI F +E+A+ + C ++++ + +++
Sbjct: 975 EGLSLMHEMRRVGLEPKLDTYKSLISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHIMM 1034
Query: 308 PFVCEKGD 315
G+
Sbjct: 1035 KMFRNSGN 1042
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/272 (19%), Positives = 117/272 (43%), Gaps = 14/272 (5%)
Query: 24 IGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQ 83
+ +++ + + L L ++ D+G F+ + T + A+A I E +
Sbjct: 820 VNGLMQALIVDGRLDELYVVIQELQDMG-FKISKSSITLMLDAFAHAG------NIFEVK 872
Query: 84 KQYKDISKEGFTARL------IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGAC 137
K Y+ + G+ + I L K + + EM + + +N++L
Sbjct: 873 KIYQGMKAAGYFPTMHLYRIMIGLLAKGKRVRDVEAMVSEMEVARFKPDLSIWNSVLKLY 932
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLD 197
F + +++ L + G++PD +YNT+I + + +L++EM + G+
Sbjct: 933 TGIGDFKKTGQVYQ-LIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGLEPK 991
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
L T+ +L+ F AE+++E +++ + + Y+ + KA +L+G
Sbjct: 992 LDTYKSLISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHIMMKMFRNSGNHSKAEKLLG 1051
Query: 258 EMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
M+ + P + T + L+ + G EEA++
Sbjct: 1052 VMKEAGVEPTIATMHLLMVSYSGSGQPEEAEK 1083
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/233 (18%), Positives = 103/233 (44%), Gaps = 2/233 (0%)
Query: 51 GRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFEN 110
G F T +Y + LA KR R +E ++ + + ++ LY F+
Sbjct: 882 GYFPT-MHLYRIMIGLLAKGKRVRDVEAMVSEMEVARFKPDLSIWNSVLKLYTGIGDFKK 940
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
+V+ + + ++N L+ ++ +E L ++ ++G+EP L +Y ++I
Sbjct: 941 TGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEM-RRVGLEPKLDTYKSLI 999
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
AF ++ A L + K +LD ++ ++ F ++G + AEK+ M V
Sbjct: 1000 SAFGKLQMVEQAEELFEGLLSKECKLDRSFYHIMMKMFRNSGNHSKAEKLLGVMKEAGVE 1059
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
P + + + + + Q ++A +++ ++ + + + ++I ++ G+
Sbjct: 1060 PTIATMHLLMVSYSGSGQPEEAEKVLDNLKVEGLPLSTLPYSSVIDAYLKNGD 1112
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/241 (18%), Positives = 105/241 (43%), Gaps = 1/241 (0%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
++ G+ + R V+ ++ RF+ + I+ ++ F+ ++ + ++
Sbjct: 892 IMIGLLAKGKRVRDVEAMVSEMEVARFKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEA 951
Query: 87 KDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEV 146
E LI +Y + E + EM E + ++ +L+ A + ++
Sbjct: 952 GLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGLEPKLDTYKSLISAFGKLQMVEQA 1011
Query: 147 DGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLL 206
+ LF+ L K + D Y+ ++K F + G+ A LL M++ G+ + T + L++
Sbjct: 1012 EELFEGLLSK-ECKLDRSFYHIMMKMFRNSGNHSKAEKLLGVMKEAGVEPTIATMHLLMV 1070
Query: 207 GFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINP 266
+ +G+ +AEK+ + + + + Y++ +D A++ + EM+ + P
Sbjct: 1071 SYSGSGQPEEAEKVLDNLKVEGLPLSTLPYSSVIDAYLKNGDHNVAIQKLMEMKKDGLEP 1130
Query: 267 D 267
D
Sbjct: 1131 D 1131
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/262 (19%), Positives = 105/262 (40%), Gaps = 44/262 (16%)
Query: 78 EILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMP--GRNCEQTVLSFNALLG 135
E+L+ +++ S + LI + KA +A + + + G C + + +LL
Sbjct: 626 ELLDFLREHSSGSHQLINEALIIMLCKAHQLGDALREYGKARDFGLFCGSFTM-YESLLL 684
Query: 136 ACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIR 195
C ++ F E +F D+ G+EP Y +++ + G ++A+ L+ + E+KG+
Sbjct: 685 CCEENELFAEASQIFSDMRF-YGVEPSDHLYRSMVVTYCKMGFPETAHYLIDQAEEKGLL 743
Query: 196 LDLIT------------------------------------FNTLLLGFYSNGRFADAEK 219
D ++ +N L+ + ++G + A
Sbjct: 744 FDDVSIHTGVIEAYGKLKLWQKAESLVGSLRQKCTMVDRKVWNALIHAYAASGCYERARA 803
Query: 220 IWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFV 279
I+ TM+ P V S N + L ++ + + ++ E++ + ++ F
Sbjct: 804 IFNTMMRDGPSPTVDSVNGLMQALIVDGRLDELYVVIQELQDMGFKISKSSITLMLDAFA 863
Query: 280 NEGNLEEAKRWYNKSGCGMNKA 301
+ GN+ E K+ Y GM A
Sbjct: 864 HAGNIFEVKKIYQ----GMKAA 881
>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 163/386 (42%), Gaps = 46/386 (11%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
+I + KE LK+ D F + + N Y V ++ R + IL K+
Sbjct: 227 MINVLCKEGKLKKAKD-FVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQ 285
Query: 87 KDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
K I + FT LI+ K E A K+F+EM + + + +N L+ N D
Sbjct: 286 K-IEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDM 344
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
+KD K GI P + +YN++I A + D A ++ E+++KGI D IT+N L+
Sbjct: 345 ASA-YKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILI 403
Query: 206 LGF---------------------------YSN--------GRFADAEKIWETMVNMNVR 230
G+ Y++ R +A+ +++ + + V
Sbjct: 404 NGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVL 463
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
P+V +NA +DG K A EL+ +M ++ PD TF +++G EG +EEA+
Sbjct: 464 PDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEAREL 523
Query: 291 YN---KSGCGMNKAIFKLLVPFVCEKGDLDFAF----NLCKRTFSERCLVDQAPLQLVVD 343
++ + G + F L+ +GD+ AF + F+ L A +Q +
Sbjct: 524 FDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCK 583
Query: 344 RLAKELRVEEAKELVELGKTNSYCRY 369
+L E KE+V G T Y
Sbjct: 584 NQEGDLAEELLKEMVSKGMTPDDTTY 609
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/218 (34%), Positives = 119/218 (54%), Gaps = 14/218 (6%)
Query: 66 RLANAKR-FRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCE 124
R ANAK+ F +E+L + +K+ +T+ L L K M E A +F ++
Sbjct: 408 RCANAKKAFLLHDEMLASGIKP---TKKTYTSLLHVLSKKNRMKE-ADDLFKKITSEGVL 463
Query: 125 QTVLSFNALL-GACVNSKKFDEVDG---LFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLD 180
V+ FNAL+ G C NS V G L KD+ ++ + PD V++NTI++ +G ++
Sbjct: 464 PDVIMFNALIDGHCSNSN----VKGAFELLKDM-DRMKVPPDEVTFNTIMQGHCREGKVE 518
Query: 181 SANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARL 240
A L EM+++GI+ D I+FNTL+ G+ G DA ++ M++ P V +YNA +
Sbjct: 519 EARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALV 578
Query: 241 DGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGF 278
GL ++ A EL+ EM SK + PD T++ LI+G
Sbjct: 579 QGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGI 616
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 136/300 (45%), Gaps = 39/300 (13%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L++L+ K E A ++ EM + +V +FN ++ K + +
Sbjct: 192 LLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHM-ETS 250
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++P++V+YNTI+ + G +++A+ +L M+++ I D T+ +L+ G GR +A
Sbjct: 251 GVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEA 310
Query: 218 EKIWETMVNMNVRPNVRSYNARLDG----------------------------------- 242
KI+E MV +RP+ YN +DG
Sbjct: 311 SKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHA 370
Query: 243 LAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMN 299
L +E++T +A ++ E++ K I+PD T+ LI G+ N ++A +++ SG
Sbjct: 371 LFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPT 430
Query: 300 KAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
K + L+ + +K + A +L K+ SE L D ++D V+ A EL++
Sbjct: 431 KKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLK 490
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 117/254 (46%), Gaps = 8/254 (3%)
Query: 125 QTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANT 184
++ + F+ L+ +C + + DE F + K G+ P + + N+++ F+ ++A
Sbjct: 149 KSSIVFDYLIKSCCDMNRADEAFECFYTMKEK-GVLPTIETCNSLLSLFLKLNRTEAAWV 207
Query: 185 LLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLA 244
L EM + I+ + TFN ++ G+ A+ M V+PN+ +YN + G
Sbjct: 208 LYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYC 267
Query: 245 IEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKA 301
+ + A ++ M+ ++I PD FT+ +LI G +G LEEA + + + G +
Sbjct: 268 SSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAV 327
Query: 302 IFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA----KEL 357
I+ L+ C KG+LD A + + ++ L E R +EA KE+
Sbjct: 328 IYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEI 387
Query: 358 VELGKTNSYCRYNL 371
E G + YN+
Sbjct: 388 QEKGISPDAITYNI 401
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 82/184 (44%), Gaps = 4/184 (2%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
S++ + K+N +K D FKK + G + ++ + + + E+L+ +
Sbjct: 436 SLLHVLSKKNRMKEADDLFKKITSEGVL-PDVIMFNALIDGHCSNSNVKGAFELLKDMDR 494
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
K E ++ + + E AR++FDEM R + +SFN L+ S++ D
Sbjct: 495 MKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISG--YSRRGDI 552
Query: 146 VDGL-FKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
D ++ G P +++YN +++ D A LL EM KG+ D T+ TL
Sbjct: 553 KDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTL 612
Query: 205 LLGF 208
+ G
Sbjct: 613 IEGI 616
>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 1 [Brachypodium distachyon]
gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 2 [Brachypodium distachyon]
Length = 704
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 125/262 (47%), Gaps = 5/262 (1%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
S+I G+ K+ L V ++K S + F+ N+ IY + A +F + +
Sbjct: 445 SMISGLCKDGRLDDAVKLYEKIS-MDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAE 503
Query: 86 YKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
D S T LI KA + A + EM + C V ++ +L+ KK D
Sbjct: 504 -NDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKID 562
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEM-EKKGIRLDLITFNT 203
L+ + K G++ D+V +N +I G +D A+ LL EM EK +++T+NT
Sbjct: 563 GALALWNQILDK-GLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNT 621
Query: 204 LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
L+ GFY G F A +W ++ + P++ SYN R+ GL +T + ++L+ EM +
Sbjct: 622 LMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASG 681
Query: 264 INPDVFTFYALIKGFVNEGNLE 285
I P T+ L++ + G ++
Sbjct: 682 IIPTAITWNILVRAVIKYGPIQ 703
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 133/301 (44%), Gaps = 56/301 (18%)
Query: 64 VQRLANAK-----RFRWIEEILEHQKQYKDISKEGFTARLIAL--YGKAAMFENARKVFD 116
++RLA + R I L H+ ++ + +A L+ L + +A M + A F
Sbjct: 55 LRRLATSSPSRLPRLLGILPRLRHRPRFSE------SAALVVLSAFSRALMPDAALAAFR 108
Query: 117 EMPG-RNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPH-KLG--IEPDLVSYNTIIKA 172
+P C V S NALL A V +++F + D F L H G I P+L +YN ++++
Sbjct: 109 RLPSFLGCNPGVRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIMLRS 168
Query: 173 FVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF------------------------ 208
+G LD A TL + +G+ D IT++TL+ GF
Sbjct: 169 LCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPD 228
Query: 209 -----------YSNGRFADAEKIWETMV-NMNVRPNVRSYNARLDGLAIEKQTKKALELV 256
+ NG F A ++WE +V + PN+ +YN LDGL K+A ++
Sbjct: 229 AVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVW 288
Query: 257 GEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEK 313
M + PD+ T+ +I G +++ A R Y+ K+G + I+ L+ C
Sbjct: 289 ERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHA 348
Query: 314 G 314
G
Sbjct: 349 G 349
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 127/269 (47%), Gaps = 50/269 (18%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL---- 153
L++ + K +NA + DEMP + + +NALLG C + +F++ +++ L
Sbjct: 200 LMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDP 259
Query: 154 ---PH------------KLGI----------------EPDLVSYNTIIKAFVDKGSLDSA 182
P+ KLG+ +PD+++Y T+I +DSA
Sbjct: 260 GASPNLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSA 319
Query: 183 NTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDG 242
+ EM K G+ D++ +N+LL GF GR +A K W++M +R NV SYN L G
Sbjct: 320 ARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIR-NVTSYNIMLKG 378
Query: 243 LAIEKQTKKALELVGEMRSKE--INPDVFTFYALIKGFVNEG-------NLEEAKRWYNK 293
L KA +L E+ K+ ++PD+ TF +I G +G LEEA+
Sbjct: 379 LFDGGMVDKATDL-WELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEAR----T 433
Query: 294 SGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
SG +++ + ++ +C+ G LD A L
Sbjct: 434 SGKELDEFSYSSMISGLCKDGRLDDAVKL 462
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 131/294 (44%), Gaps = 11/294 (3%)
Query: 84 KQYKDISKEGFTARLIAL------YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGAC 137
+ Y ++ K G ++ + A A K +D M + V S+N +L
Sbjct: 321 RVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGI-RNVTSYNIMLKGL 379
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLD 197
+ D+ L++ L + PD+V+++T+I +KG + + +L E G LD
Sbjct: 380 FDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELD 439
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
++++++ G +GR DA K++E + + +PN YNA ++G + A+ +
Sbjct: 440 EFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYS 499
Query: 258 EMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKG 314
+M + +P T+ LI G EA R+ + GC ++ + L+ +C
Sbjct: 500 QMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDK 559
Query: 315 DLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV-ELGKTNSYC 367
+D A L + + D +++ L +V+EA +L+ E+ + N+ C
Sbjct: 560 KIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCC 613
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 111/243 (45%), Gaps = 11/243 (4%)
Query: 84 KQYKDISKEGFTAR------LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGAC 137
K Y+ IS + F LI + +A+ F +A +V+ +M +C T +++N L+
Sbjct: 461 KLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGL 520
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLD 197
++K+ E +++ K G D+ +Y ++I+ +D A L ++ KG++ D
Sbjct: 521 CKAEKYLEASRFTREMLEK-GCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTD 579
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMN-VRPNVRSYNARLDGLAIEKQTKKALELV 256
++ N L+ G S G+ +A ++ M N PNV +YN +DG KA L
Sbjct: 580 VVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLW 639
Query: 257 GEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEK 313
+ + PD+ ++ IKG + E + N+ SG + +LV V +
Sbjct: 640 MAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIPTAITWNILVRAVIKY 699
Query: 314 GDL 316
G +
Sbjct: 700 GPI 702
>gi|297836398|ref|XP_002886081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331921|gb|EFH62340.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 743
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 136/304 (44%), Gaps = 39/304 (12%)
Query: 102 YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEP 161
Y + +AR+VFD+M V +FN L+ K ++ G+ + + + + P
Sbjct: 179 YPSSFSIASAREVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNP 238
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
D V+YNTI+KA KG L LL +M++ G+ + +T+N L+ G+ G +A +I
Sbjct: 239 DNVTYNTILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIV 298
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
E M N+ P++ +YN ++G+ ++ LEL+ M+S ++ PDV T+ LI G
Sbjct: 299 ELMKQTNILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFEL 358
Query: 282 GNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEK------------------------- 313
G EAK+ + G N+ + + ++C++
Sbjct: 359 GLSLEAKKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVT 418
Query: 314 -----------GDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGK 362
GDL A + + + ++ L ++D L KE +V+EA L++
Sbjct: 419 YHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAH 478
Query: 363 TNSY 366
Y
Sbjct: 479 KRGY 482
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 137/290 (47%), Gaps = 47/290 (16%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A+K+ ++M + ++ N L +K +EV K+L G PD+V+Y+T+I
Sbjct: 364 AKKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLI 423
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT--------------------------- 203
KA++ G L A ++ EM +KGI+++ IT NT
Sbjct: 424 KAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYI 483
Query: 204 --------LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALEL 255
L++G++ + A ++W+ M + + P V ++N+ + GL +T+ A+E
Sbjct: 484 VDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEK 543
Query: 256 VGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKAIFK-------LLVP 308
E+ + PD TF ++I G+ EG +E+A +YN+S K FK +L+
Sbjct: 544 FDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESI----KHSFKPDNYTCNILLN 599
Query: 309 FVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
+C++G + A N +ER VD ++ K+ +++EA +L+
Sbjct: 600 GLCKEGMTEKALNFFNTLITER-EVDTVTYNTMISAFCKDKKLKEAYDLL 648
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 116/268 (43%), Gaps = 3/268 (1%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I+ K +L ++ ++ G + NT + L ++ +L+ +
Sbjct: 421 TLIKAYLKVGDLSGALEMMREMGQKG-IKMNTITLNTILDALCKERKVDEAHNLLDSAHK 479
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
I E LI Y + E A +++DEM TV +FN+L+G + K +
Sbjct: 480 RGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTEL 539
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
F +L G+ PD ++N+II + +G ++ A E K + D T N LL
Sbjct: 540 AMEKFDELAES-GLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILL 598
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEIN 265
G G A + T++ V +YN + +K+ K+A +L+ EM K +
Sbjct: 599 NGLCKEGMTEKALNFFNTLITEREVDTV-TYNTMISAFCKDKKLKEAYDLLSEMEEKRLE 657
Query: 266 PDVFTFYALIKGFVNEGNLEEAKRWYNK 293
PD FT+ ++I + +G L EA K
Sbjct: 658 PDRFTYNSIITSLMEDGKLSEADELLKK 685
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 105/214 (49%), Gaps = 7/214 (3%)
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLG---FYSNGR 213
L P ++ + A++ G A + +M + ++ +L+T NTLL+G + S+
Sbjct: 125 LSPPPSKALFDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFS 184
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK-EINPDVFTFY 272
A A ++++ MV + V +V+++N ++G +E + + AL ++ M S+ +NPD T+
Sbjct: 185 IASAREVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYN 244
Query: 273 ALIKGFVNEGNLEEAKRW---YNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSE 329
++K +G L + K ++G N+ + LV C+ G L AF + +
Sbjct: 245 TILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQT 304
Query: 330 RCLVDQAPLQLVVDRLAKELRVEEAKELVELGKT 363
L D ++++ + + E EL+++ K+
Sbjct: 305 NILPDLCTYNILINGVCNAGSIREGLELMDVMKS 338
>gi|22128587|gb|AAM52339.1| fertility restorer [Petunia x hybrida]
Length = 592
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 135/268 (50%), Gaps = 1/268 (0%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++IRG++ EN +K V FKK + +Y + L + ++L +Q
Sbjct: 147 TLIRGLFAENKVKDAVHLFKKLVRENICEPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQ 206
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
+I + K M + A + +EM +N ++++ +L+ ++++
Sbjct: 207 GITKPDTCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEK 266
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
V LF ++ H L I PD+ ++N++I +G ++ A ++ M +KG+ + IT+N ++
Sbjct: 267 VRTLFLEMIH-LNIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVM 325
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEIN 265
G+ G+ A +I+++M++ + P++ SY A ++G +K+ KA++L E+ +
Sbjct: 326 DGYCLRGQMGRARRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLK 385
Query: 266 PDVFTFYALIKGFVNEGNLEEAKRWYNK 293
P + T L++G G E AK ++++
Sbjct: 386 PSIVTCSVLLRGLFEVGRTECAKIFFDE 413
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/383 (22%), Positives = 163/383 (42%), Gaps = 44/383 (11%)
Query: 25 GSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQK 84
G+V+ G+ K+ + ++ D + G + +T IY + +L K
Sbjct: 182 GTVMDGLCKKGHTQKAFDLLRLMEQ-GITKPDTCIYNIVIDAFCKDGMLDGATSLLNEMK 240
Query: 85 QYKDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKK 142
Q K+I + T LI GK + +E R +F EM N V +FN+++ G C K
Sbjct: 241 Q-KNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCKEGKV 299
Query: 143 FDE----------------------VDG------------LFKDLPHKLGIEPDLVSYNT 168
D +DG +F + K GIEPD++SY
Sbjct: 300 EDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDK-GIEPDIISYTA 358
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
+I +V+K +D A L E+ + G++ ++T + LL G + GR A+ ++ M
Sbjct: 359 LINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQAAG 418
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
PN+ ++ L G ++A+ ++ + + ++ + A+I G G L++A
Sbjct: 419 HIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVINGLCKNGKLDKAH 478
Query: 289 RWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRL 345
+ K G + + ++ C++G LD A ++ ++ CL D ++V
Sbjct: 479 ATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLPDNRTYNVIVRGF 538
Query: 346 AKELRVEEAKELVE--LGKTNSY 366
+ +V E K ++ GK+ S+
Sbjct: 539 FRSSKVSEMKAFLKEIAGKSFSF 561
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 88/192 (45%), Gaps = 3/192 (1%)
Query: 128 LSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLY 187
++F L+ K + LFK L + EPD V Y T++ KG A LL
Sbjct: 143 VTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPDEVMYGTVMDGLCKKGHTQKAFDLLR 202
Query: 188 EMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEK 247
ME+ + D +N ++ F +G A + M N+ P++ +Y + +DGL
Sbjct: 203 LMEQGITKPDTCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLS 262
Query: 248 QTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR---WYNKSGCGMNKAIFK 304
Q +K L EM I PDV TF ++I G EG +E+A+ + + G N+ +
Sbjct: 263 QWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYN 322
Query: 305 LLVPFVCEKGDL 316
+++ C +G +
Sbjct: 323 VVMDGYCLRGQM 334
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 121/267 (45%), Gaps = 11/267 (4%)
Query: 102 YGKAAMFENAR------KVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPH 155
+G + FEN + +F +M + +SF+ LL A V+ K + V +F+++ H
Sbjct: 41 FGVSNEFENVKCLDDAFSLFRQMVTTKPLPSAVSFSKLLKALVHMKHYSSVVSIFREI-H 99
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
KL I D + +T++ + D ++L KKGI + +TF TL+ G ++ +
Sbjct: 100 KLRIPVDAFALSTVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVK 159
Query: 216 DAEKIWETMVNMNV-RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYAL 274
DA +++ +V N+ P+ Y +DGL + T+KA +L+ M PD + +
Sbjct: 160 DAVHLFKKLVRENICEPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIV 219
Query: 275 IKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERC 331
I F +G L+ A N + + + L+ + + + L
Sbjct: 220 IDAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNI 279
Query: 332 LVDQAPLQLVVDRLAKELRVEEAKELV 358
D V+D L KE +VE+A+E++
Sbjct: 280 YPDVCTFNSVIDGLCKEGKVEDAEEIM 306
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 82/196 (41%), Gaps = 16/196 (8%)
Query: 86 YKDISKEGFTARLIA----LYG--KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
+++IS+ G ++ L G + E A+ FDEM + + LLG
Sbjct: 376 FREISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFK 435
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
+ +E F L + + ++ Y +I G LD A+ ++ G+ D+I
Sbjct: 436 NGLVEEAMSHFHKLERRRE-DTNIQIYTAVINGLCKNGKLDKAHATFEKLPLIGLHPDVI 494
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
T+ ++ G+ G +A+ + M + P+ R+YN + G + V EM
Sbjct: 495 TYTAMISGYCQEGLLDEAKDMLRKMEDNGCLPDNRTYNVIVRGFFRSSK-------VSEM 547
Query: 260 RS--KEINPDVFTFYA 273
++ KEI F+F A
Sbjct: 548 KAFLKEIAGKSFSFEA 563
>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
Length = 932
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 122/252 (48%), Gaps = 13/252 (5%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A ++ +EM + C+ + ++N ++ + + L D K G PD+ +YNT++
Sbjct: 489 ALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITK-GCIPDIFTYNTLV 547
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
+ + LDSA L+ M +G+ D+IT+NTLL G + + +I++ M
Sbjct: 548 DGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCA 607
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
PN+ +YN ++ L K+ +A++L+GEM+SK + PDV +F LI GF G+L+ A
Sbjct: 608 PNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGL 667
Query: 291 YNKSGCGMNK--------AIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVV 342
+ GM K A + +++ E+ ++ A L C D ++++
Sbjct: 668 FR----GMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLI 723
Query: 343 DRLAKELRVEEA 354
D K V +
Sbjct: 724 DGFCKTGNVNQG 735
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 126/253 (49%), Gaps = 4/253 (1%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
+ AR++FDEM V +FN L+ A E + LF D K G+ P+L ++N
Sbjct: 277 DRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLF-DKVLKRGVCPNLFTFNI 335
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
I+ +GSLD A LL + ++G+R D++T+NT++ G R +AE+ MVN
Sbjct: 336 FIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGG 395
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
PN +YN+ +DG + A ++ + K PD FT+ +L+ GF +G+ ++A
Sbjct: 396 FEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAM 455
Query: 289 RWYNKS-GCGMNKAI--FKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRL 345
+ G G+ +I + L+ +C++G + A L + C D L+++ L
Sbjct: 456 AVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGL 515
Query: 346 AKELRVEEAKELV 358
K + +A L+
Sbjct: 516 CKMGCLSDANHLI 528
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 131/299 (43%), Gaps = 7/299 (2%)
Query: 28 IRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYK 87
I+G+ KE +L R V S G R + Y + L R EE L H+
Sbjct: 337 IQGLCKEGSLDRAVRLLGCVSREG-LRPDVVTYNTVICGLCRKSRVVEAEECL-HKMVNG 394
Query: 88 DISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEV 146
FT +I Y K M +A ++ + + + ++ +L+ D+
Sbjct: 395 GFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQA 454
Query: 147 DGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLL 206
+FKD K G+ P ++ YNT+IK +G + A L+ EM +KG + D+ T+N ++
Sbjct: 455 MAVFKDGLGK-GLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIIN 513
Query: 207 GFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINP 266
G G +DA + + P++ +YN +DG + + A+ELV M S+ + P
Sbjct: 514 GLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTP 573
Query: 267 DVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
DV T+ L+ G EE + + GC N + ++ +C ++ A +L
Sbjct: 574 DVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDL 632
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 100/194 (51%), Gaps = 2/194 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+ Y + ++A ++ + M + V+++N LL + K +EV +FK + K
Sbjct: 546 LVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEK- 604
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G P++++YNTII++ + ++ A LL EM+ KG+ D+++F TL+ GF G A
Sbjct: 605 GCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGA 664
Query: 218 EKIWETM-VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
++ M +V +YN + + + K AL L EM+ +PD +T+ LI
Sbjct: 665 YGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLID 724
Query: 277 GFVNEGNLEEAKRW 290
GF GN+ + ++
Sbjct: 725 GFCKTGNVNQGYKF 738
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 113/238 (47%), Gaps = 2/238 (0%)
Query: 53 FRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISK-EGFTARLIALYGKAAMFENA 111
F+ Y +Q+L +F +E +L + D + EG + YG+ + A
Sbjct: 115 FKHTLFTYKSMLQKLGFHGKFNEMENLLSEMRSNLDNTLLEGVYVEAMRFYGRKGKIQEA 174
Query: 112 RKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIK 171
F+ M NC+ +V S+NA++ V F++ ++ + K +E D+ +Y IK
Sbjct: 175 VDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDK-KVESDVYTYTIRIK 233
Query: 172 AFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRP 231
+F G +A LL M G + + + T++ GFY G A ++++ M+ + P
Sbjct: 234 SFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCP 293
Query: 232 NVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
+V ++N + L + ++ L ++ + + P++FTF I+G EG+L+ A R
Sbjct: 294 DVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVR 351
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 87/197 (44%), Gaps = 9/197 (4%)
Query: 77 EEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKV------FDEMPGRNCEQTVLSF 130
EE++E +K ++++G +I N++KV EM + V+SF
Sbjct: 592 EEVME---IFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSF 648
Query: 131 NALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEME 190
L+ D GLF+ + + + +YN II AF ++ ++ A L EM+
Sbjct: 649 GTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMK 708
Query: 191 KKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTK 250
K G D T+ L+ GF G K + P++ ++ L+ L +E + +
Sbjct: 709 KNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQ 768
Query: 251 KALELVGEMRSKEINPD 267
+A+ ++ M K+I PD
Sbjct: 769 EAVGIIHLMVQKDIVPD 785
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 89/216 (41%), Gaps = 20/216 (9%)
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFY------ 209
K G + L +Y ++++ G + LL EM LD NTLL G Y
Sbjct: 112 KQGFKHTLFTYKSMLQKLGFHGKFNEMENLLSEMRSN---LD----NTLLEGVYVEAMRF 164
Query: 210 --SNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPD 267
G+ +A +E M N P+V SYNA ++ L +A ++ M+ K++ D
Sbjct: 165 YGRKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESD 224
Query: 268 VFTFYALIKGFVNEGNLEEAKRWYNKS---GCGMNKAIFKLLVPFVCEKGDLDFAFNLCK 324
V+T+ IK F G A R GC N + +V E GD D A L
Sbjct: 225 VYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFD 284
Query: 325 RTFSERCLV-DQAPLQLVVDRLAKELRVEEAKELVE 359
E CL D +V L K+ V E++ L +
Sbjct: 285 EML-ECCLCPDVTTFNKLVHALCKKGFVLESERLFD 319
>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 754
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 154/342 (45%), Gaps = 4/342 (1%)
Query: 35 NNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGF 94
N+LK + K S G + + + ++ L A + R +LE Y + E
Sbjct: 168 NSLKLVEISHAKMSVWG-IKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKT 226
Query: 95 TARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLP 154
++ Y + + A ++ ++M C + +S N ++ + ++ +++
Sbjct: 227 FTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMS 286
Query: 155 HKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRF 214
++ G PD ++NT++ G + A ++ M ++G D+ T+N+++ G G
Sbjct: 287 NQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEV 346
Query: 215 ADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYAL 274
+A ++ + M+ + PN +YN + L E Q ++A EL + SK I PDV TF +L
Sbjct: 347 KEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSL 406
Query: 275 IKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERC 331
I+G N A + + GC ++ + +L+ +C KG LD A N+ K+ C
Sbjct: 407 IQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGC 466
Query: 332 LVDQAPLQLVVDRLAKELRVEEAKELVELGKTNSYCRYNLKF 373
++D K + EA+E+ + + + R ++ +
Sbjct: 467 ARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTY 508
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 143/303 (47%), Gaps = 7/303 (2%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
+++ G+ K ++K ++ G + + Y + L + E+L+ Q
Sbjct: 300 TLVNGLCKAGHVKHAIEIMDVMLQEG-YDPDVYTYNSVISGLCKLGEVKEAVEVLD-QMI 357
Query: 86 YKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
+D S T LI+ K E A ++ + + V +FN+L+ ++
Sbjct: 358 TRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHR 417
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
LF+++ K G EPD +YN +I + KG LD A +L +ME G +IT+NTL
Sbjct: 418 VAMELFEEMRSK-GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTL 476
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+ GF + +AE+I++ M V N +YN +DGL ++ + A +L+ +M +
Sbjct: 477 IDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQ 536
Query: 265 NPDVFTFYALIKGFVNEGNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFN 321
PD +T+ +L+ F G++++A + +GC + + L+ +C+ G ++ A
Sbjct: 537 KPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASK 596
Query: 322 LCK 324
L +
Sbjct: 597 LLR 599
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 154/358 (43%), Gaps = 23/358 (6%)
Query: 10 CSFSTTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLAN 69
CS+S + + ++ G KE ++ ++ ++ S+ F + + V L
Sbjct: 255 CSWSNVS-------VNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCK 307
Query: 70 AKRFRWIEEILEHQKQYKDISKEGFTA------RLIALYGKAAMFENARKVFDEMPGRNC 123
A + EI++ Q EG+ +I+ K + A +V D+M R+C
Sbjct: 308 AGHVKHAIEIMDVMLQ------EGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDC 361
Query: 124 EQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSAN 183
+++N L+ + +E L + L K GI PD+ ++N++I+ + A
Sbjct: 362 SPNTVTYNTLISTLCKENQVEEATELARVLTSK-GILPDVCTFNSLIQGLCLTRNHRVAM 420
Query: 184 TLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
L EM KG D T+N L+ S G+ +A + + M +V +YN +DG
Sbjct: 421 ELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGF 480
Query: 244 AIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNK 300
+T++A E+ EM ++ + T+ LI G +E+A + ++ G +K
Sbjct: 481 CKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDK 540
Query: 301 AIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
+ L+ C GD+ A ++ + S C D ++ L K RVE A +L+
Sbjct: 541 YTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLL 598
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 92/188 (48%), Gaps = 6/188 (3%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + KA A ++FDEM + +++N L+ S++ ++ L + +
Sbjct: 476 LIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIME- 534
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G +PD +YN+++ F G + A ++ M G D++T+ TL+ G GR A
Sbjct: 535 GQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVA 594
Query: 218 EKIWET--MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM-RSKEINPDVFTFYAL 274
K+ + M +N+ P+ +YN + GL +++T +A+ L EM E PD ++ +
Sbjct: 595 SKLLRSIQMKGINLTPH--AYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIV 652
Query: 275 IKGFVNEG 282
+G N G
Sbjct: 653 FRGLCNGG 660
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 126/311 (40%), Gaps = 43/311 (13%)
Query: 103 GKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPD 162
G++ F++ +K+ ++M CE +F L+ + + DE+ + + + G++PD
Sbjct: 94 GRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPD 153
Query: 163 LVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFN-------------------- 202
YN ++ VD SL +M GI+ D+ TFN
Sbjct: 154 THFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLE 213
Query: 203 ---------------TLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEK 247
T++ G+ G A +I E MV + S N + G E
Sbjct: 214 DMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEG 273
Query: 248 QTKKALELVGEMRSKE-INPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIF 303
+ + AL + EM +++ PD +TF L+ G G+++ A + + G + +
Sbjct: 274 RVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTY 333
Query: 304 KLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVEL--- 360
++ +C+ G++ A + + + C + ++ L KE +VEEA EL +
Sbjct: 334 NSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTS 393
Query: 361 -GKTNSYCRYN 370
G C +N
Sbjct: 394 KGILPDVCTFN 404
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 123/270 (45%), Gaps = 18/270 (6%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGI------YTGTVQRLANAKRFRWIEEI 79
++I + KEN + +++++L R T+ GI + +Q L + R E+
Sbjct: 370 TLISTLCKEN-------QVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMEL 422
Query: 80 LEHQKQYKDISKEGFTARLI--ALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGAC 137
E + K + FT ++ +L K + E A + +M C ++V+++N L+
Sbjct: 423 FEEMRS-KGCEPDEFTYNMLIDSLCSKGKLDE-ALNMLKQMELSGCARSVITYNTLIDGF 480
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLD 197
+ K E + +F ++ G+ + V+YNT+I ++ A L+ +M +G + D
Sbjct: 481 CKANKTREAEEIFDEMEVH-GVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPD 539
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
T+N+LL F G A I + M + P++ +Y + GL + + A +L+
Sbjct: 540 KYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLR 599
Query: 258 EMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
++ K IN + +I+G + EA
Sbjct: 600 SIQMKGINLTPHAYNPVIQGLFRKRKTTEA 629
>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
Length = 700
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 120/228 (52%), Gaps = 4/228 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI Y + A +F++M R+ +++NAL+ + + + L ++ K
Sbjct: 375 LINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEM-EKS 433
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++P + ++NT+I A+ G L+ T+L +M++KGI+ D+I+F +++ F NG+ +A
Sbjct: 434 GVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEA 493
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
I + M+ +V PN + YN+ +D T++AL LV +M++ ++ + T+ L+KG
Sbjct: 494 VAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKG 553
Query: 278 FVNEGNLEEAKRW-YNKSGCGMNKAI--FKLLVPFVCEKGDLDFAFNL 322
++EA+ Y G+ + + ++ C KGD D A L
Sbjct: 554 LCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALEL 601
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 109/215 (50%), Gaps = 2/215 (0%)
Query: 79 ILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACV 138
++E +K D S E F LI YG A E V +M + + V+SF +++ A
Sbjct: 427 VMEMEKSGVDPSVETFNT-LIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFC 485
Query: 139 NSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL 198
+ K E + D+ +K + P+ YN+II A+++ G + A L+ +M+ G+ +
Sbjct: 486 KNGKIPEAVAILDDMIYK-DVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASI 544
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
+T+N LL G + + +AE++ T+ N +RP+V SYN + + T KALEL+ E
Sbjct: 545 VTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQE 604
Query: 259 MRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK 293
M I P + T + L+ + G + + + Y +
Sbjct: 605 MNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQ 639
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 90/180 (50%), Gaps = 2/180 (1%)
Query: 86 YKDISKEG-FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
YKD++ +I Y ++ E A + ++M +++++N LL S + D
Sbjct: 502 YKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQID 561
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
E + L L ++ G+ PD+VSYNTII A +KG D A LL EM K GIR L T +TL
Sbjct: 562 EAEELIYTLRNQ-GLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTL 620
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+ S GR D E +++ M++ NV P+ Y +D + K L EM K I
Sbjct: 621 VSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGI 680
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 110/233 (47%), Gaps = 4/233 (1%)
Query: 129 SFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
S+N ++ S K + +F ++ +G+ P+ ++YNT+I V G L++ L +
Sbjct: 196 SYNVVIAGLWRSGKGSDALKVFDEMV-DMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQ 254
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
M G + +++T+N LL G GR + + + M + ++ P+ +Y+ DGL +
Sbjct: 255 MLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGE 314
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKL 305
++ L L E K + +T L+ G +G + +AK+ + +G I+
Sbjct: 315 SQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNT 374
Query: 306 LVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
L+ C+ DL AF + ++ S D +++ L K V +A++LV
Sbjct: 375 LINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLV 427
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 101/229 (44%), Gaps = 4/229 (1%)
Query: 133 LLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKK 192
LL K + +F+ L H G+ P V YNT+I + L A + +M+ +
Sbjct: 340 LLNGLCKDGKVAKAKQVFEMLVHT-GLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSR 398
Query: 193 GIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKA 252
IR D IT+N L+ G AE + M V P+V ++N +D Q +K
Sbjct: 399 HIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKC 458
Query: 253 LELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPF 309
++ +M+ K I DV +F +++K F G + EA + N ++ ++
Sbjct: 459 FTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDA 518
Query: 310 VCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
E GD + A L ++ + L++ L + +++EA+EL+
Sbjct: 519 YIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELI 567
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 87/209 (41%), Gaps = 4/209 (1%)
Query: 110 NARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEP-DLVSYNT 168
+ R F + ++N ++ ACV + D + + + G P D SYN
Sbjct: 140 DVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAMLRRMGRSEGAPPPDAFSYNV 199
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
+I G A + EM G+ + IT+NT++ G G ++ + M++
Sbjct: 200 VIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDG 259
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
+PNV +YN L GL + + L+ EM S + PD FT+ L G G +
Sbjct: 260 PKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTML 319
Query: 289 RWYNKS---GCGMNKAIFKLLVPFVCEKG 314
+ +S G + +L+ +C+ G
Sbjct: 320 SLFAESLKKGVMLGAYTCSILLNGLCKDG 348
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 125/316 (39%), Gaps = 43/316 (13%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I + K E ++ D+M + V+++N LL + + DE L ++
Sbjct: 235 MIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASH- 293
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
+ PD +Y+ + G + +L E KKG+ L T + LL G +G+ A A
Sbjct: 294 SMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKA 353
Query: 218 EKIWETMVNM-----------------------------------NVRPNVRSYNARLDG 242
++++E +V+ ++RP+ +YNA ++G
Sbjct: 354 KQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALING 413
Query: 243 LAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMN 299
L + KA +LV EM ++P V TF LI + G LE+ + + G +
Sbjct: 414 LCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSD 473
Query: 300 KAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
F +V C+ G + A + + + ++D + E+A LVE
Sbjct: 474 VISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVE 533
Query: 360 ----LGKTNSYCRYNL 371
G + S YNL
Sbjct: 534 KMKNSGVSASIVTYNL 549
>gi|357124917|ref|XP_003564143.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Brachypodium distachyon]
Length = 1285
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 121/250 (48%), Gaps = 10/250 (4%)
Query: 115 FDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFV 174
F +PG TV FNA++G S +FD+V L D +EPDLVS+NT+I A
Sbjct: 55 FPHLPG----ATVQVFNAMMGVYARSGRFDDVRQLL-DAMRGQELEPDLVSFNTLINARA 109
Query: 175 DKGSL--DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPN 232
G L SA LL E+ + G+R D+IT+NTL+ DA ++E M+ RP+
Sbjct: 110 KSGCLAPGSAFDLLLEVRQVGLRPDVITYNTLISACSQGSNLDDAVAVFEEMMASECRPD 169
Query: 233 VRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN 292
+ +YNA + + + A + E+ K PD T+ +L+ F EG+ + +R
Sbjct: 170 LWTYNAMVSVHGRCGKAQDAERMFRELVEKGFKPDAVTYNSLLYAFAKEGDADTVERVCE 229
Query: 293 ---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKEL 349
++G + + ++ + G LD A L + C D +++D L K
Sbjct: 230 ELVRAGFKKDGITYNTMIHMYGKMGRLDLALGLYDEMRALGCTPDAVTYTVLIDSLGKMD 289
Query: 350 RVEEAKELVE 359
R+ +A +++E
Sbjct: 290 RISDAGKVLE 299
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 131/265 (49%), Gaps = 4/265 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI+ + + ++A VF+EM C + ++NA++ K + + +F++L K
Sbjct: 141 LISACSQGSNLDDAVAVFEEMMASECRPDLWTYNAMVSVHGRCGKAQDAERMFRELVEK- 199
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G +PD V+YN+++ AF +G D+ + E+ + G + D IT+NT++ + GR A
Sbjct: 200 GFKPDAVTYNSLLYAFAKEGDADTVERVCEELVRAGFKKDGITYNTMIHMYGKMGRLDLA 259
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+++ M + P+ +Y +D L + A +++ EM + P + TF ALI
Sbjct: 260 LGLYDEMRALGCTPDAVTYTVLIDSLGKMDRISDAGKVLEEMADAGLKPTLVTFSALICA 319
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
+ G EEA R ++ SG ++ + +++ + GD+ L + ++ D
Sbjct: 320 YAKGGRREEAVRTFSHMVASGVKPDRLAYLVMLDIIARSGDMRKLMALYQTMMNDGYRPD 379
Query: 335 QAPLQLVVDRLAKELRVEEAKELVE 359
A Q+++ LAK +E + +V+
Sbjct: 380 NALYQVMLAALAKGNEYDEIEAVVQ 404
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 102/216 (47%), Gaps = 8/216 (3%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL---P 154
++ +Y ++ F++ R++ D M G+ E ++SFN L+ A S G DL
Sbjct: 69 MMGVYARSGRFDDVRQLLDAMRGQELEPDLVSFNTLINARAKSGCL--APGSAFDLLLEV 126
Query: 155 HKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRF 214
++G+ PD+++YNT+I A +LD A + EM R DL T+N ++ G+
Sbjct: 127 RQVGLRPDVITYNTLISACSQGSNLDDAVAVFEEMMASECRPDLWTYNAMVSVHGRCGKA 186
Query: 215 ADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYAL 274
DAE+++ +V +P+ +YN+ L A E + E+ D T+ +
Sbjct: 187 QDAERMFRELVEKGFKPDAVTYNSLLYAFAKEGDADTVERVCEELVRAGFKKDGITYNTM 246
Query: 275 IKGFVNEGNLEEAKRWYNKS---GCGMNKAIFKLLV 307
I + G L+ A Y++ GC + + +L+
Sbjct: 247 IHMYGKMGRLDLALGLYDEMRALGCTPDAVTYTVLI 282
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/281 (19%), Positives = 120/281 (42%), Gaps = 38/281 (13%)
Query: 64 VQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNC 123
++ K ++ E ++ KQ I + + A LI Y ++ ++E+AR VFD M +
Sbjct: 597 IEAYGKIKLWQHAENFVKGLKQEPSIDRRIWNA-LIHAYAESGLYEHARAVFDIMIEKGP 655
Query: 124 EQTVLSFNALLGACVNSKKFDEVDGLFKDLPH---------------------------- 155
T+ S N ++ A + + DE+ + ++L
Sbjct: 656 LPTIDSVNGMMRALIIDGRLDELYVIVQELQDMGFKISKSTVILMLDAFTKAGDIFEVMK 715
Query: 156 ------KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFY 209
+ G P++ Y ++I ++ EME+ G DL NTLLL +
Sbjct: 716 IYNGMKEAGYLPNMHIYRSMISLLCRNKRYRDVELMVVEMERAGFEPDLTILNTLLLMYT 775
Query: 210 SNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVF 269
NG F +++ +++ + PN +YN + + + ++ L+ EM K + P +
Sbjct: 776 GNGNFDKTVEVYHSILEAGLEPNEDTYNTLIVMYSRNLRPEEGFTLLNEMGKKGLTPKLE 835
Query: 270 TFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLV 307
++ +L+ E+A++ + + G +N++++ +L+
Sbjct: 836 SYKSLLAASGKAKLWEQAEQLFEEIRSKGYRLNRSLYHMLM 876
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 118/275 (42%), Gaps = 14/275 (5%)
Query: 24 IGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQ 83
+ ++R + + L L ++ D+G F+ I TV + +A F +I E
Sbjct: 662 VNGMMRALIIDGRLDELYVIVQELQDMG-FK----ISKSTVILMLDA--FTKAGDIFEVM 714
Query: 84 KQYKDISKEGFTA------RLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGAC 137
K Y + + G+ +I+L + + + + EM E + N LL
Sbjct: 715 KIYNGMKEAGYLPNMHIYRSMISLLCRNKRYRDVELMVVEMERAGFEPDLTILNTLLLMY 774
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLD 197
+ FD+ ++ + G+EP+ +YNT+I + + TLL EM KKG+
Sbjct: 775 TGNGNFDKTVEVYHSILEA-GLEPNEDTYNTLIVMYSRNLRPEEGFTLLNEMGKKGLTPK 833
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
L ++ +LL + AE+++E + + R N Y+ + KA +L+
Sbjct: 834 LESYKSLLAASGKAKLWEQAEQLFEEIRSKGYRLNRSLYHMLMKIYRDACNHSKAEQLLA 893
Query: 258 EMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN 292
M+ I P + T + L+ + G+ +EA++ N
Sbjct: 894 SMKEDGIEPTIATMHILMTSYGTAGHPDEAEKVLN 928
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 93/215 (43%), Gaps = 9/215 (4%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTV--LSFNALLGACVNSKKFDEVDGLFKDLPH 155
+I YGK ++++A + G E ++ +NAL+ A S ++ +F +
Sbjct: 596 MIEAYGKIKLWQHAENF---VKGLKQEPSIDRRIWNALIHAYAESGLYEHARAVFDIMIE 652
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
K G P + S N +++A + G LD ++ E++ G ++ T +L F G
Sbjct: 653 K-GPLPTIDSVNGMMRALIIDGRLDELYVIVQELQDMGFKISKSTVILMLDAFTKAGDIF 711
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
+ KI+ M PN+ Y + + L K+ + +V EM PD+ L+
Sbjct: 712 EVMKIYNGMKEAGYLPNMHIYRSMISLLCRNKRYRDVELMVVEMERAGFEPDLTILNTLL 771
Query: 276 KGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLV 307
+ GN ++ Y+ ++G N+ + L+
Sbjct: 772 LMYTGNGNFDKTVEVYHSILEAGLEPNEDTYNTLI 806
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/207 (19%), Positives = 84/207 (40%), Gaps = 39/207 (18%)
Query: 143 FDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLIT-- 200
F E +F D+ +GIEP Y ++I A+ G ++A+ L+ E + GI L++++
Sbjct: 535 FPEASQVFSDMQF-IGIEPSRKIYESMISAYCKLGFPETAHQLMDEAVQSGISLNILSSR 593
Query: 201 ---------------------------------FNTLLLGFYSNGRFADAEKIWETMVNM 227
+N L+ + +G + A +++ M+
Sbjct: 594 VTMIEAYGKIKLWQHAENFVKGLKQEPSIDRRIWNALIHAYAESGLYEHARAVFDIMIEK 653
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
P + S N + L I+ + + +V E++ T ++ F G++ E
Sbjct: 654 GPLPTIDSVNGMMRALIIDGRLDELYVIVQELQDMGFKISKSTVILMLDAFTKAGDIFEV 713
Query: 288 KRWYN---KSGCGMNKAIFKLLVPFVC 311
+ YN ++G N I++ ++ +C
Sbjct: 714 MKIYNGMKEAGYLPNMHIYRSMISLLC 740
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 47/259 (18%), Positives = 105/259 (40%), Gaps = 19/259 (7%)
Query: 40 LVDKFKKSSDLGRFRTNTGIYTGTVQR--LANAKRFRWIEEILEHQKQYKDIS------- 90
++D F K+ D+ IY G + L N +R + +L K+Y+D+
Sbjct: 700 MLDAFTKAGDIFEV---MKIYNGMKEAGYLPNMHIYRSMISLLCRNKRYRDVELMVVEME 756
Query: 91 KEGFTA------RLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
+ GF L+ +Y F+ +V+ + E ++N L+ + + +
Sbjct: 757 RAGFEPDLTILNTLLLMYTGNGNFDKTVEVYHSILEAGLEPNEDTYNTLIVMYSRNLRPE 816
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
E L ++ K G+ P L SY +++ A + A L E+ KG RL+ ++ L
Sbjct: 817 EGFTLLNEMGKK-GLTPKLESYKSLLAASGKAKLWEQAEQLFEEIRSKGYRLNRSLYHML 875
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+ + + AE++ +M + P + + + + +A +++ ++S +
Sbjct: 876 MKIYRDACNHSKAEQLLASMKEDGIEPTIATMHILMTSYGTAGHPDEAEKVLNSLKSSSL 935
Query: 265 NPDVFTFYALIKGFVNEGN 283
+ + ++ G+
Sbjct: 936 EVSTLPYSTVFNAYLKNGD 954
>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
Length = 1060
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 115/233 (49%), Gaps = 17/233 (7%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI Y KA A + E+ V +++ L+ + +E DGL +++ K
Sbjct: 339 LIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKK- 397
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G P+ V+YNT+I + +G+++ A + +M +KGI ++ITF+TL+ G+ G+ A
Sbjct: 398 GFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAA 457
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ MV + P+V +Y A +DG + TK+A L EM+ ++P+VFT LI G
Sbjct: 458 MGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDG 517
Query: 278 FVNEGNLEEAKRWY----------------NKSGCGMNKAIFKLLVPFVCEKG 314
+G + +A + + ++S C N ++ L+ +C G
Sbjct: 518 LCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDG 570
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 153/362 (42%), Gaps = 20/362 (5%)
Query: 15 TATATGPKFI--GSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKR 72
A P + G++I G ++ + + F + + F T IYT ++ L R
Sbjct: 185 VARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVV-IYTILIRGLCGESR 243
Query: 73 FRWIEEILEHQKQYKDISKEGFTARLIAL------YGKAAMFENARKVFDEMPGRNCEQT 126
I E + ++ + G L Y K A + A +++ EM G
Sbjct: 244 ------ISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPN 297
Query: 127 VLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLL 186
V++F L+ + + D+ G+ P++ YN +I + G+L A +L
Sbjct: 298 VVTFGILIDGLCKTDEMVSARKFLIDMA-SFGVVPNIFVYNCLIDGYCKAGNLSEALSLH 356
Query: 187 YEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIE 246
E+EK I D+ T++ L+ G R +A+ + + M PN +YN +DG E
Sbjct: 357 SEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKE 416
Query: 247 KQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIF 303
+KA+E+ +M K I P++ TF LI G+ G +E A Y + G + +
Sbjct: 417 GNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAY 476
Query: 304 KLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKT 363
L+ + G+ AF L K + L ++D L K+ R+ +A +L L KT
Sbjct: 477 TALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLF-LAKT 535
Query: 364 NS 365
+
Sbjct: 536 GT 537
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 122/265 (46%), Gaps = 7/265 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + + + E A V+ +M + + + N +L V +FD + ++ D+ +
Sbjct: 132 LIIAFSEMGLVEEALWVYYKM---DVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVAR- 187
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G P++V+Y T+I +G A L EM +K I ++ + L+ G R ++A
Sbjct: 188 GASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEA 247
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
E ++ TM N + PN+ +YN +DG KKALEL EM + P+V TF LI G
Sbjct: 248 ESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDG 307
Query: 278 FVNEGNLEEAKRW---YNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
+ A+++ G N ++ L+ C+ G+L A +L L D
Sbjct: 308 LCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPD 367
Query: 335 QAPLQLVVDRLAKELRVEEAKELVE 359
+++ L R+EEA L++
Sbjct: 368 VFTYSILIKGLCGVDRMEEADGLLQ 392
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 108/276 (39%), Gaps = 49/276 (17%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMP 119
Y+ ++ L R + +L+ K+ + LI Y K E A +V +M
Sbjct: 371 YSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMT 430
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL 179
+ E +++F+ L+ + K + GL+ ++ K G+ PD+V+Y +I G+
Sbjct: 431 EKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIK-GLLPDVVAYTALIDGHFKDGNT 489
Query: 180 DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV---------- 229
A L EM++ G+ ++ T + L+ G +GR +DA K++ +
Sbjct: 490 KEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDR 549
Query: 230 ---RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT---------------- 270
PN Y A + GL + + KA + +MR + PDVFT
Sbjct: 550 SLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRD 609
Query: 271 -------------------FYALIKGFVNEGNLEEA 287
+ L KG+ G L+ A
Sbjct: 610 VMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSA 645
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 79/181 (43%), Gaps = 24/181 (13%)
Query: 160 EPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEK 219
+PD+V+ + A D G+LD + + +G+ DL N+L+ + G A +
Sbjct: 746 QPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTARR 805
Query: 220 IWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMR----------------SKE 263
+++ + +V ++ + + G A+ Q ++AL+L EM+ S
Sbjct: 806 LFDG----TQKKDVTTWTSMIVGHALHGQAEEALQLFTEMKETNKRARKNKRNGEXESSL 861
Query: 264 INPDVFTFYALIKGFVNEGNLEEAKRWYN--KSGCGMNKAI--FKLLVPFVCEKGDLDFA 319
+ P+ TF ++ + G +EE K+ + K + I F +V +C G L A
Sbjct: 862 VLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGCMVDLLCRAGLLTEA 921
Query: 320 F 320
+
Sbjct: 922 Y 922
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 38/98 (38%)
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
P+ V Y +I+ G + A+ +M G+R D+ T ++ G + D +
Sbjct: 554 PNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMML 613
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
++ M + PN Y G K AL GE
Sbjct: 614 QADILKMGIIPNSSVYRVLAKGYEESGYLKSALSFCGE 651
>gi|440577332|emb|CCI55338.1| PH01B019A14.7 [Phyllostachys edulis]
Length = 359
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 118/229 (51%), Gaps = 2/229 (0%)
Query: 44 FKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYG 103
FK++ ++ N +Y+ + R+A A+RF +EE+L + K + F RLI +YG
Sbjct: 58 FKRACTRRDYKPNETLYSLMIDRIACARRFGDVEELLARARIEKFRFSDEFFYRLIKMYG 117
Query: 104 KAAMF-ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPD 162
A E A + MPG NC + +FN +L V ++++ V ++ P +LG+ D
Sbjct: 118 NVANHPEKAIETLFAMPGYNCWPSTKTFNYVLHMLVCKRQYEVVHEVYSSAP-RLGVTLD 176
Query: 163 LVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWE 222
+N ++K G D A +LL+EM K+G ++ T++TL+ +G+ +A +++E
Sbjct: 177 TCCFNILVKGLCQLGKFDEAISLLHEMPKQGCLPNVNTYSTLMHFLCQHGQVDEAFELFE 236
Query: 223 TMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTF 271
M ++ + YN + GL E + KA +L M S+ P+ T+
Sbjct: 237 RMWKEDIAADTVVYNILISGLCREGRVTKAFDLFKSMASEGCYPNSGTY 285
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 79/179 (44%), Gaps = 21/179 (11%)
Query: 218 EKIWETMVNM---NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYAL 274
EK ET+ M N P+ +++N L L ++Q + E+ + D F L
Sbjct: 124 EKAIETLFAMPGYNCWPSTKTFNYVLHMLVCKRQYEVVHEVYSSAPRLGVTLDTCCFNIL 183
Query: 275 IKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERC 331
+KG G +EA + K GC N + L+ F+C+ G +D AF L +R + E
Sbjct: 184 VKGLCQLGKFDEAISLLHEMPKQGCLPNVNTYSTLMHFLCQHGQVDEAFELFERMWKEDI 243
Query: 332 LVDQAPLQLVVDRLAKELRVEEAKELV---------------ELGKTNSYCRYNLKFPS 375
D +++ L +E RV +A +L +L T+++ ++L FP+
Sbjct: 244 AADTVVYNILISGLCREGRVTKAFDLFKSMASEGCYPNSGTYQLIFTSAFSSFSLDFPA 302
>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 572
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 122/248 (49%), Gaps = 4/248 (1%)
Query: 114 VFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAF 173
VFD M + C +V+S+ L+ + D+ GLF+++ + G+ PD V+YNT+I
Sbjct: 321 VFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQ-GLIPDTVTYNTLIHGL 379
Query: 174 VDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNV 233
G L A L +EM G DL+T+ L N R A+A + + + N+ P++
Sbjct: 380 CHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDI 439
Query: 234 RSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY-- 291
Y+ +DG+ + + A +L ++ SK ++PDV T+ +I G +G L EA + +
Sbjct: 440 HIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGE 499
Query: 292 -NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELR 350
+++GC N + L+ + A L + S +D + L+V+ L+ +
Sbjct: 500 MDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVEMLSDDGL 559
Query: 351 VEEAKELV 358
+ K+++
Sbjct: 560 DQSVKQIL 567
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 108/244 (44%), Gaps = 37/244 (15%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL-----PH------- 155
++A +F+ M +++ F+ LL + K + V L+K + PH
Sbjct: 35 IDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNI 94
Query: 156 ----------------------KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKG 193
KLG +P ++ T+I+ +G + A L +M +G
Sbjct: 95 LINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEG 154
Query: 194 IRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKAL 253
+ D++T+ TL+ G G + A + +M N RP V Y+ +D L ++Q +AL
Sbjct: 155 FQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEAL 214
Query: 254 ELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFV 310
L +M +K I+P+ FT+ +LI G G+ +EA R + ++ F LV +
Sbjct: 215 SLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDAL 274
Query: 311 CEKG 314
C++G
Sbjct: 275 CKEG 278
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/347 (21%), Positives = 147/347 (42%), Gaps = 11/347 (3%)
Query: 14 TTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRF 73
+TAT T ++IRG+ E + + F K + G F+ + Y + L
Sbjct: 123 STATFT------TLIRGLCVEGKIGEALQLFDKMTGEG-FQPDVLTYGTLINGLCKVGNT 175
Query: 74 RWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNAL 133
L +Q + +I K A +F +M + ++++L
Sbjct: 176 STAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSL 235
Query: 134 LGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKG 193
+ + E LF + H+ I PD +++NT++ A +G + A+ ++ M +
Sbjct: 236 IHGLCILGHWKEAIRLFYAMIHR-KIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSD 294
Query: 194 IRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKAL 253
++ D++T+N+L+ G +++TMV P+V SY ++G + KA+
Sbjct: 295 LKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAM 354
Query: 254 ELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS---GCGMNKAIFKLLVPFV 310
L EM + + PD T+ LI G + G L +A +++ G + +++L ++
Sbjct: 355 GLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYL 414
Query: 311 CEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
C+ L A L K D +V+D + + +E A++L
Sbjct: 415 CKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDL 461
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 82/188 (43%), Gaps = 4/188 (2%)
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLD 197
+N D+ LF + ++ P +V ++ ++ + + +L +M+ GI +
Sbjct: 30 LNVNTIDDALSLFNRML-RMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHN 88
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
T N L+ F R A + ++ + +P+ ++ + GL +E + +AL+L
Sbjct: 89 TYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFD 148
Query: 258 EMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW---YNKSGCGMNKAIFKLLVPFVCEKG 314
+M + PDV T+ LI G GN A R+ + C ++ ++ +C+
Sbjct: 149 KMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDR 208
Query: 315 DLDFAFNL 322
L A +L
Sbjct: 209 QLTEALSL 216
>gi|255660946|gb|ACU25642.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
Length = 484
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 143/320 (44%), Gaps = 34/320 (10%)
Query: 73 FRWIEE--ILEHQKQYK---------------------DISKEGFT------ARLIALYG 103
FRW+E + EH ++ D+ K+G LI YG
Sbjct: 32 FRWVERSNLFEHNRETHHKIIEILGRASKLNHARCILLDMPKKGLEWDEDLWVLLIDSYG 91
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
KA + + + K+F +M E+T+ S++AL + ++ F + + G EP
Sbjct: 92 KAGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRGRYMMAKRYFNKMLSE-GNEPTR 150
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
++N +I F G +++AN +M+ + I D++T+NT++ G+Y + +AEK +
Sbjct: 151 HTFNIMIWGFFLSGKVETANRFFEDMKSREIMPDVVTYNTMIXGYYRVKKMEEAEKYFVE 210
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M N+ P V +Y + G + AL LV EM+ I P+ T+ L+ G N
Sbjct: 211 MKGRNIEPTVVTYTTLIKGYVSVDRVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAQK 270
Query: 284 LEEA----KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQ 339
+ EA K K + +IF L+ C+ GDLD A ++ K +
Sbjct: 271 MSEARSILKEMVEKYITPTDNSIFLRLISGQCKAGDLDAAADVLKAMIRLSVPTEAGHYG 330
Query: 340 LVVDRLAKELRVEEAKELVE 359
++++ K + ++A +L++
Sbjct: 331 VLIENYCKAGQYDQAVKLLD 350
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 74/162 (45%), Gaps = 10/162 (6%)
Query: 90 SKEGFTARLIALYGKAAMFENARKVFDEM--------PGRNCEQTVLSFNALLGACVNSK 141
++ G LI Y KA ++ A K+ D + P ++N L+ N+
Sbjct: 324 TEAGHYGVLIENYCKAGQYDQAVKLLDRLIEKDIILRPQSTLHLEPSAYNPLIEYLCNNG 383
Query: 142 KFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITF 201
+ + + L + L KLG++ D + N +I+ +GS DSA LL M ++ R + +
Sbjct: 384 QTAKAESLVRQL-MKLGVQ-DPTALNALIRGHSQEGSPDSAFELLKIMLRRKARSEKSAY 441
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
++L+ + ADA+ ++M+ P+ + + ++ L
Sbjct: 442 DSLVQSYLKKSEPADAKAALDSMIENGHLPDPALFRSVMESL 483
>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
gi|219887141|gb|ACL53945.1| unknown [Zea mays]
Length = 522
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 110/215 (51%), Gaps = 2/215 (0%)
Query: 79 ILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACV 138
++E +K D S E F LI YG A E V +M + + V+SF +++ A
Sbjct: 249 VMEMEKSGVDPSVETFNT-LIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFC 307
Query: 139 NSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL 198
+ K E + D+ +K + P+ YN+II A+++ G + A L+ +M+ G+ +
Sbjct: 308 KNGKIPEAVAILDDMIYK-DVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASI 366
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
+T+N LL G + + +AE++ T+ N +RP+V SYN + + T KALEL+ E
Sbjct: 367 VTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQE 426
Query: 259 MRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK 293
M I P + T++ L+ + G + + + Y +
Sbjct: 427 MNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQ 461
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 132/270 (48%), Gaps = 6/270 (2%)
Query: 58 GIYTGTV--QRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVF 115
G YT ++ L + E++LE + LI Y + A +F
Sbjct: 155 GAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIF 214
Query: 116 DEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVD 175
++M R+ +++NAL+ + + + L ++ K G++P + ++NT+I A+
Sbjct: 215 EQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEM-EKSGVDPSVETFNTLIDAYGT 273
Query: 176 KGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRS 235
G L+ T+L +M++KGI+ D+I+F +++ F NG+ +A I + M+ +V PN +
Sbjct: 274 AGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQV 333
Query: 236 YNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW-YNKS 294
YN+ +D T++A LV +M++ ++ + T+ L+KG ++EA+ Y
Sbjct: 334 YNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLR 393
Query: 295 GCGMNKAI--FKLLVPFVCEKGDLDFAFNL 322
G+ + + ++ C KGD D A L
Sbjct: 394 NQGLRPDVVSYNTIISACCNKGDTDKALEL 423
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 92/183 (50%), Gaps = 2/183 (1%)
Query: 86 YKDISKEG-FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
YKD++ +I Y ++ E A + ++M +++++N LL S + D
Sbjct: 324 YKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQID 383
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
E + L L ++ G+ PD+VSYNTII A +KG D A LL EM K GIR L T++TL
Sbjct: 384 EAEELIYTLRNQ-GLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTL 442
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+ S GR D E +++ M++ NV P+ Y +D + K L EM K I
Sbjct: 443 VSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGI 502
Query: 265 NPD 267
D
Sbjct: 503 AFD 505
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 102/229 (44%), Gaps = 4/229 (1%)
Query: 133 LLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKK 192
LL K + + + + L H G+ P V YNT+I + L A + +M+ +
Sbjct: 162 LLNGLCKDGKVAKAEQVLEMLVHT-GLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSR 220
Query: 193 GIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKA 252
IR D IT+N L+ G AE + M V P+V ++N +D Q +K
Sbjct: 221 HIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKC 280
Query: 253 LELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPF 309
++ +M+ K I DV +F +++K F G + EA + N ++ ++
Sbjct: 281 FTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDA 340
Query: 310 VCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
E GD + AF L ++ + L++ L + +++EA+EL+
Sbjct: 341 YIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELI 389
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 109/233 (46%), Gaps = 4/233 (1%)
Query: 129 SFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
S+N ++ S K + +F ++ +G+ P+ ++YNT+I V G L++ L +
Sbjct: 18 SYNVVIAGLWRSGKGSDALKVFDEMV-DMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQ 76
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
M G + +++T+N LL G GR + + + M + ++ P+ +Y+ DGL +
Sbjct: 77 MLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGE 136
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKL 305
++ L L E K + +T L+ G +G + +A++ +G I+
Sbjct: 137 SRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNT 196
Query: 306 LVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
L+ C+ DL AF + ++ S D +++ L K V +A++LV
Sbjct: 197 LINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLV 249
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 124/316 (39%), Gaps = 43/316 (13%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I + K E ++ D+M + ++++N LL + + DE L ++
Sbjct: 57 MIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASH- 115
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
+ PD +Y+ + G + +L E KKG+ L T + LL G +G+ A A
Sbjct: 116 SMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKA 175
Query: 218 EKIWETMVNM-----------------------------------NVRPNVRSYNARLDG 242
E++ E +V+ ++RP+ +YNA ++G
Sbjct: 176 EQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALING 235
Query: 243 LAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMN 299
L + KA +LV EM ++P V TF LI + G LE+ + + G +
Sbjct: 236 LCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSD 295
Query: 300 KAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
F +V C+ G + A + + + ++D + E+A LVE
Sbjct: 296 VISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVE 355
Query: 360 ----LGKTNSYCRYNL 371
G + S YNL
Sbjct: 356 KMKNSGVSASIVTYNL 371
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 56/122 (45%)
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
PD SYN +I G A + EM G+ + IT+NT++ G G ++
Sbjct: 14 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 73
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
+ M++ +PN+ +YN L GL + + L+ EM S + PD FT+ L G
Sbjct: 74 RDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTR 133
Query: 281 EG 282
G
Sbjct: 134 TG 135
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/167 (19%), Positives = 80/167 (47%), Gaps = 3/167 (1%)
Query: 197 DLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELV 256
D ++N ++ G + +G+ +DA K+++ MV+M V PN +YN +DG + L
Sbjct: 15 DAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLR 74
Query: 257 GEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGM---NKAIFKLLVPFVCEK 313
+M P++ T+ L+ G G ++E + ++ + + +L +
Sbjct: 75 DQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRT 134
Query: 314 GDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVEL 360
G+ +L + + ++ ++++ L K+ +V +A++++E+
Sbjct: 135 GESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEM 181
>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Vitis vinifera]
Length = 609
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 132/276 (47%), Gaps = 39/276 (14%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A+KVF+EM + + V+++N+L+ ++ K DE GL +D +G++P++V+YN +I
Sbjct: 318 AKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGL-QDKMSGMGLKPNVVTYNALI 376
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
F K L A +L ++ K+G+ ++ITFNTL+ + GR DA + M++ V
Sbjct: 377 NGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVC 436
Query: 231 PNVRSYN--------------AR---------------------LDGLAIEKQTKKALEL 255
PNV +YN AR +D L + +T+KA+ L
Sbjct: 437 PNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRL 496
Query: 256 VGEMRSKEINPDVFTFYALIKGFVNEGNLEEA---KRWYNKSGCGMNKAIFKLLVPFVCE 312
+ EM +NP T+ ALI G+ EGN A + K G N + +L+ C
Sbjct: 497 LDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCN 556
Query: 313 KGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKE 348
KG L+ A L + + ++ ++ D + ++
Sbjct: 557 KGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEK 592
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 122/249 (48%), Gaps = 4/249 (1%)
Query: 114 VFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAF 173
V+ EM R V++F+ ++ KF + + +D+ G P +++YNTII +
Sbjct: 216 VYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDM-KAWGFSPSVITYNTIIDGY 274
Query: 174 VDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNV 233
G + A+ LL EM K I + ITFN L+ GF + A+K++E M ++PNV
Sbjct: 275 CKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNV 334
Query: 234 RSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN- 292
+YN+ ++GL + +AL L +M + P+V T+ ALI GF + L+EA+ +
Sbjct: 335 VTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDD 394
Query: 293 --KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELR 350
K G N F L+ + G +D AF L + + ++ +E
Sbjct: 395 IGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGN 454
Query: 351 VEEAKELVE 359
V+EA++L +
Sbjct: 455 VKEARKLAK 463
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 116/226 (51%), Gaps = 7/226 (3%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K M + AR++ D++ R V++FN L+ A + + D+ L + +
Sbjct: 375 LINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDA-FLLRSMMLDT 433
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ P++ +YN +I F +G++ A L EME G++ DL+T+N L+ G A
Sbjct: 434 GVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKA 493
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ + M + + P+ +YNA +DG E + AL + M K ++ T+ LIKG
Sbjct: 494 VRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKG 553
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKG---DLD 317
F N+G LEEA R N + G N+ + +L + EKG D+D
Sbjct: 554 FCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFIPDID 599
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 135/310 (43%), Gaps = 26/310 (8%)
Query: 73 FRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMP--GRNCEQTVLSF 130
F+W QK++ I RL+ L A + R + D T+
Sbjct: 94 FKWT------QKEFGAIHNVEQFCRLLHLLANAKNYNKIRALLDSFAKNAHYSNSTIFHS 147
Query: 131 NALLGA--CVNSKKFD----------EVDGLFK--DLPHKLGIEPDLVSYNTIIKAFVDK 176
++LG+ C NS D E+D + D G +S N ++ + V +
Sbjct: 148 LSVLGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKE 207
Query: 177 GSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSY 236
G + ++ EM ++ I ++++TF+ ++ G G+F A + E M P+V +Y
Sbjct: 208 GRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITY 267
Query: 237 NARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY---NK 293
N +DG + KA L+ EM +K I+P+ TF LI GF + N+ AK+ + +
Sbjct: 268 NTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQR 327
Query: 294 SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEE 353
G N + L+ +C G LD A L + + +++ K+ ++E
Sbjct: 328 QGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKE 387
Query: 354 AKELV-ELGK 362
A+E++ ++GK
Sbjct: 388 AREMLDDIGK 397
>gi|15227316|ref|NP_179280.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75217061|sp|Q9ZVX5.1|PP156_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g16880
gi|3757517|gb|AAC64219.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|18175643|gb|AAL59902.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|20465657|gb|AAM20297.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330251452|gb|AEC06546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 134/296 (45%), Gaps = 39/296 (13%)
Query: 102 YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEP 161
Y + +AR+VFD+M V +FN L+ K ++ G+ + + + + P
Sbjct: 179 YPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNP 238
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
D V+YNTI+KA KG L LL +M+K G+ + +T+N L+ G+ G +A +I
Sbjct: 239 DNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIV 298
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
E M NV P++ +YN ++GL ++ LEL+ M+S ++ PDV T+ LI G
Sbjct: 299 ELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFEL 358
Query: 282 GNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEK------------------------- 313
G EA++ + G N+ + + ++C++
Sbjct: 359 GLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVT 418
Query: 314 -----------GDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
GDL A + + + ++ L ++D L KE +++EA L+
Sbjct: 419 YHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLL 474
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 135/290 (46%), Gaps = 47/290 (16%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
ARK+ ++M + ++ N L +K + V K+L G PD+V+Y+T+I
Sbjct: 364 ARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLI 423
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT--------------------------- 203
KA++ G L A ++ EM +KGI+++ IT NT
Sbjct: 424 KAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFI 483
Query: 204 --------LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALEL 255
L++GF+ + A ++W+ M + + P V ++N+ + GL +T+ A+E
Sbjct: 484 VDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEK 543
Query: 256 VGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKAIFK-------LLVP 308
E+ + PD TF ++I G+ EG +E+A +YN+S K FK +L+
Sbjct: 544 FDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESI----KHSFKPDNYTCNILLN 599
Query: 309 FVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
+C++G + A N ER VD ++ K+ +++EA +L+
Sbjct: 600 GLCKEGMTEKALNFFNTLIEER-EVDTVTYNTMISAFCKDKKLKEAYDLL 648
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 113/268 (42%), Gaps = 3/268 (1%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I+ K +L ++ ++ G + NT + L ++ +L +
Sbjct: 421 TLIKAYLKVGDLSGALEMMREMGQKG-IKMNTITLNTILDALCKERKLDEAHNLLNSAHK 479
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
I E LI + + E A +++DEM TV +FN+L+G + K +
Sbjct: 480 RGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTEL 539
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
F +L G+ PD ++N+II + +G ++ A E K + D T N LL
Sbjct: 540 AMEKFDELAES-GLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILL 598
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEIN 265
G G A + T++ V +YN + +K+ K+A +L+ EM K +
Sbjct: 599 NGLCKEGMTEKALNFFNTLIEEREVDTV-TYNTMISAFCKDKKLKEAYDLLSEMEEKGLE 657
Query: 266 PDVFTFYALIKGFVNEGNLEEAKRWYNK 293
PD FT+ + I + +G L E K
Sbjct: 658 PDRFTYNSFISLLMEDGKLSETDELLKK 685
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 106/214 (49%), Gaps = 7/214 (3%)
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLG---FYSNGR 213
L P ++ + A++ +G A + +M + ++ +L+T NTLL+G + S+
Sbjct: 125 LSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFS 184
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK-EINPDVFTFY 272
+ A ++++ MV + V NV+++N ++G +E + + AL ++ M S+ ++NPD T+
Sbjct: 185 ISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYN 244
Query: 273 ALIKGFVNEGNLEEAKRW---YNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSE 329
++K +G L + K K+G N+ + LV C+ G L AF + +
Sbjct: 245 TILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQT 304
Query: 330 RCLVDQAPLQLVVDRLAKELRVEEAKELVELGKT 363
L D ++++ L + E EL++ K+
Sbjct: 305 NVLPDLCTYNILINGLCNAGSMREGLELMDAMKS 338
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 60/132 (45%), Gaps = 12/132 (9%)
Query: 160 EPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEK 219
E D V+YNT+I AF L A LL EME+KG+ D T+N+ + +G+ ++ ++
Sbjct: 622 EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDE 681
Query: 220 IWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFV 279
+ ++ ++ + + + Q + +E+N + + +I
Sbjct: 682 L------------LKKFSGKFGSMKRDLQVETEKNPATSESKEELNTEAIAYSDVIDELC 729
Query: 280 NEGNLEEAKRWY 291
+ G L+E R Y
Sbjct: 730 SRGRLKEHSRSY 741
>gi|326487462|dbj|BAJ89715.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326505214|dbj|BAK02994.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 428
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 158/348 (45%), Gaps = 22/348 (6%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
+R + + LV S D R T+ +++ RL +R +L+
Sbjct: 54 AVRAETDPDRVHSLVASALSSPDYHRLHTSRALFSLAASRLDRLRRPDLAASLLDQLLAS 113
Query: 87 KDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEV 146
+S G AR ++L+ ++A + F ++ +S +ALL A + + + D++
Sbjct: 114 APVSP-GLLARALSLFPGP---DDAVRAFSS--SAPAARSDVSLSALLSALLRAGRIDDL 167
Query: 147 DGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIR----LDLITFN 202
FK LG+ P S+N ++ V L +A LL EM KK + D+I++N
Sbjct: 168 KSTFKSAESSLGVAPGSASHNVLLHTLVKSSDLPAARKLLNEMAKKKFKHRPPPDIISYN 227
Query: 203 TLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
TLL GF + EK+ + + + PNV +YN R+ A + +T K EL+ M SK
Sbjct: 228 TLLAGFSEQDDVEEFEKLLKEINENKLEPNVVTYNCRMHWFARKGETFKGEELLDVMESK 287
Query: 263 EINPDVFTFYALIKGFVNEGNLEEAKRWYNKS------------GCGMNKAIFKLLVPFV 310
+ P+ T+ AL++G+ EGN+ A R + + G ++ + LL +
Sbjct: 288 GVLPNYVTYNALVQGYCKEGNVGAAMRVFKRMKVMKRREGRSDLGVSVHSQTYVLLFRTL 347
Query: 311 CEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
EK LD A LC F+ + ++ +V+ L K R EAK +V
Sbjct: 348 VEKERLDDALWLCNSCFAMKAAPSFEAVKGLVEGLVKGGRSAEAKAVV 395
>gi|414876286|tpg|DAA53417.1| TPA: hypothetical protein ZEAMMB73_373649 [Zea mays]
Length = 561
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 141/288 (48%), Gaps = 12/288 (4%)
Query: 78 EILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCE----QTVLSFNAL 133
EILEH + I ++ A L GK M + K F + G+NC+ +L+ NA
Sbjct: 2 EILEHWFVFSWIHQKHNWAW--KLRGKR-MSGHIHKSF-RLTGQNCKLGIVANLLACNAW 57
Query: 134 LGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKG 193
+ ++ E + LF+ + + G++P+ V+Y +I + +G ++ A + M +KG
Sbjct: 58 IDRLGKDGRYREAEKLFRGMADR-GLDPNEVTYAILIHSLCKRGMMEDALCMFDRMREKG 116
Query: 194 IRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKAL 253
IR+ + +N+L+ G+ + F A + MV + P+ SY+ + GL + A+
Sbjct: 117 IRMTVYPYNSLINGYCKHNNFHQARGLLNEMVAKGLTPSPASYSPLIAGLCRKGDLASAM 176
Query: 254 ELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFV 310
EL EM ++ +V+TF ALI GF +GN++EA R ++K S N+ F +++
Sbjct: 177 ELHREMTRNAVSGNVYTFTALISGFCKDGNMDEATRLFHKMMESSLVPNEVTFNVMIEGY 236
Query: 311 CEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
C G++ AF L + D + ++ + L +AKE V
Sbjct: 237 CRVGNIRKAFQLYDQMLDRGLTPDNYTYRSLISVVCLTLGAMKAKEFV 284
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 134/363 (36%), Gaps = 70/363 (19%)
Query: 64 VQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNC 123
+ RL R+R E++ E A LI K M E+A +FD M +
Sbjct: 58 IDRLGKDGRYREAEKLFRGMADRGLDPNEVTYAILIHSLCKRGMMEDALCMFDRMREKGI 117
Query: 124 EQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSAN 183
TV +N+L+ F + GL ++ K G+ P SY+ +I KG L SA
Sbjct: 118 RMTVYPYNSLINGYCKHNNFHQARGLLNEMVAK-GLTPSPASYSPLIAGLCRKGDLASAM 176
Query: 184 TLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
L EM + + ++ TF L+ GF +G +A +++ M+ ++ PN ++N ++G
Sbjct: 177 ELHREMTRNAVSGNVYTFTALISGFCKDGNMDEATRLFHKMMESSLVPNEVTFNVMIEGY 236
Query: 244 AIEKQTKKALELVGEMRSKEINPDVFTF-------------------------------- 271
+KA +L +M + + PD +T+
Sbjct: 237 CRVGNIRKAFQLYDQMLDRGLTPDNYTYRSLISVVCLTLGAMKAKEFVADLENNCAVLNS 296
Query: 272 ---YALIKGF--------------------------------VNEGNLEEAKRWYNK--S 294
AL+ GF NEG LE+AK +
Sbjct: 297 FSLTALMHGFCKEGSAEILCKEMLAGHFLPNSYTYNCFLDYLANEGELEKAKVLHAAMLE 356
Query: 295 GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA 354
GC N F L+ C G + A +L ++ D +++ L K +A
Sbjct: 357 GCLANTVTFNTLIKGFCMAGQIQGAIDLMQKNTESGFFPDCISYSTIINELCKVGDTNKA 416
Query: 355 KEL 357
EL
Sbjct: 417 FEL 419
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 1/116 (0%)
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
P+ +YN + ++G L+ A L M +G + +TFNTL+ GF G+ A +
Sbjct: 326 PNSYTYNCFLDYLANEGELEKAKVLHAAM-LEGCLANTVTFNTLIKGFCMAGQIQGAIDL 384
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
+ P+ SY+ ++ L T KA EL EM K + PD+ + LI+
Sbjct: 385 MQKNTESGFFPDCISYSTIINELCKVGDTNKAFELWNEMLYKGLKPDIVAYTILIR 440
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 3/116 (2%)
Query: 113 KVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIK 171
KV C ++FN L+ G C+ + +D + K+ + G PD +SY+TII
Sbjct: 348 KVLHAAMLEGCLANTVTFNTLIKGFCMAGQIQGAIDLMQKNT--ESGFFPDCISYSTIIN 405
Query: 172 AFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
G + A L EM KG++ D++ + L+ +G F I+ MV +
Sbjct: 406 ELCKVGDTNKAFELWNEMLYKGLKPDIVAYTILIRWCNIHGEFDKGLGIYSDMVTV 461
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 49/102 (48%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G + V++NT+IK F G + A L+ + + G D I+++T++ G A
Sbjct: 357 GCLANTVTFNTLIKGFCMAGQIQGAIDLMQKNTESGFFPDCISYSTIINELCKVGDTNKA 416
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
++W M+ ++P++ +Y + I + K L + +M
Sbjct: 417 FELWNEMLYKGLKPDIVAYTILIRWCNIHGEFDKGLGIYSDM 458
>gi|326517739|dbj|BAK03788.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 430
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 158/348 (45%), Gaps = 22/348 (6%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
+R + + LV S D R T+ +++ RL +R +L+
Sbjct: 56 AVRAETDPDRVHSLVASALSSPDYHRLHTSRALFSLAASRLDRLRRPDLAASLLDQLLAS 115
Query: 87 KDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEV 146
+S G AR ++L+ ++A + F ++ +S +ALL A + + + D++
Sbjct: 116 APVSP-GLLARALSLFPGP---DDAVRAFSS--SAPAARSDVSLSALLSALLRAGRIDDL 169
Query: 147 DGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIR----LDLITFN 202
FK LG+ P S+N ++ V L +A LL EM KK + D+I++N
Sbjct: 170 KSTFKSAESSLGVAPGSASHNVLLHTLVKSSDLPAARKLLNEMAKKKFKHRPPPDIISYN 229
Query: 203 TLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
TLL GF + EK+ + + + PNV +YN R+ A + +T K EL+ M SK
Sbjct: 230 TLLAGFSEQDDVEEFEKLLKEINENKLEPNVVTYNCRMHWFARKGETFKGEELLDVMESK 289
Query: 263 EINPDVFTFYALIKGFVNEGNLEEAKRWYNKS------------GCGMNKAIFKLLVPFV 310
+ P+ T+ AL++G+ EGN+ A R + + G ++ + LL +
Sbjct: 290 GVLPNYVTYNALVQGYCKEGNVGAAMRVFKRMKVMKRREGRSDLGVSVHSQTYVLLFRTL 349
Query: 311 CEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
EK LD A LC F+ + ++ +V+ L K R EAK +V
Sbjct: 350 VEKERLDDALWLCNSCFAMKAAPSFEAVKGLVEGLVKGGRSAEAKAVV 397
>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 132/257 (51%), Gaps = 4/257 (1%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K F++A +F+EM + + V+++++L+G N K+D+ + +++ + I PD+
Sbjct: 286 KDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGR-NIIPDV 344
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
V+++ +I FV +G L A L EM +GI D IT+N+L+ GF +A ++++
Sbjct: 345 VTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDL 404
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
MV+ P++ +Y+ ++ K+ + L E+ SK + P+ T+ L+ GF G
Sbjct: 405 MVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGK 464
Query: 284 LEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL 340
L AK + + G + + +L+ +C+ G+L+ A + ++ R + +
Sbjct: 465 LNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNI 524
Query: 341 VVDRLAKELRVEEAKEL 357
++ + +V++A L
Sbjct: 525 IIHGMCNASKVDDAWSL 541
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 128/252 (50%), Gaps = 5/252 (1%)
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
F+A LI ++ K A+++++EM R +++N+L+ E + +F DL
Sbjct: 347 FSA-LIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMF-DL 404
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
G EPD+V+Y+ +I ++ +D L E+ KG+ + IT+NTL+LGF +G+
Sbjct: 405 MVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGK 464
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
A+++++ MV+ V P+V +Y LDGL + KALE+ +M+ + + +
Sbjct: 465 LNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNI 524
Query: 274 LIKGFVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSER 330
+I G N +++A + + G + + +++ +C+KG L A L ++ +
Sbjct: 525 IIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDG 584
Query: 331 CLVDQAPLQLVV 342
C D +++
Sbjct: 585 CTPDDFTYNILI 596
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 112/214 (52%), Gaps = 4/214 (1%)
Query: 149 LFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
LF+ + + I+ +V Y+ +I + GS D A +L EME KGI+ D++T+++L+ G
Sbjct: 261 LFRKMEER-NIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGL 319
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDV 268
++G++ D K+ M+ N+ P+V +++A +D E + +A EL EM ++ I PD
Sbjct: 320 CNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDT 379
Query: 269 FTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKR 325
T+ +LI GF E L EA + ++ GC + + +L+ C+ +D L +
Sbjct: 380 ITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFRE 439
Query: 326 TFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
S+ + + +V + ++ AKEL +
Sbjct: 440 ISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQ 473
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 109/248 (43%), Gaps = 42/248 (16%)
Query: 78 EILEHQKQYKDISKEGFTA------RLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFN 131
++LE ++ Y ++ G LI + K A ++FD M + CE +++++
Sbjct: 359 KLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYS 418
Query: 132 ALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEK 191
L+ + +K+ D+ LF+++ K G+ P+ ++YNT++ F G L++A L EM
Sbjct: 419 ILINSYCKAKRVDDGMRLFREISSK-GLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVS 477
Query: 192 KGIRLDLITFNTLLLGFYSNGRFADAEKIWETM--------------------------- 224
+G+ ++T+ LL G NG A +I+E M
Sbjct: 478 RGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDD 537
Query: 225 --------VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
+ V+P+V +YN + GL + +A L +M+ PD FT+ LI+
Sbjct: 538 AWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIR 597
Query: 277 GFVNEGNL 284
+ L
Sbjct: 598 AHLGGSGL 605
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 98/203 (48%), Gaps = 3/203 (1%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G +PD V+Y ++ G+ A L +ME++ I+ ++ ++ ++ +G F DA
Sbjct: 234 GFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDA 293
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ M ++ +V +Y++ + GL + + +++ EM + I PDV TF ALI
Sbjct: 294 LSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDV 353
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
FV EG L EAK YN+ G + + L+ C++ L A + S+ C D
Sbjct: 354 FVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPD 413
Query: 335 QAPLQLVVDRLAKELRVEEAKEL 357
++++ K RV++ L
Sbjct: 414 IVTYSILINSYCKAKRVDDGMRL 436
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 120/285 (42%), Gaps = 37/285 (12%)
Query: 110 NARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD---------EVDGLFKDL------- 153
+A +F+ M T + FN L A +K++D E++G+ D+
Sbjct: 82 DAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMI 141
Query: 154 ------------------PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIR 195
KLG EPD ++++T++ F +G + A L+ M + R
Sbjct: 142 NCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQR 201
Query: 196 LDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALEL 255
DL+T +TL+ G GR ++A + + MV +P+ +Y L+ L + AL+L
Sbjct: 202 PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDL 261
Query: 256 VGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCE 312
+M + I V + +I +G+ ++A +N+ G + + L+ +C
Sbjct: 262 FRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCN 321
Query: 313 KGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
G D + + + D ++D KE ++ EAKEL
Sbjct: 322 DGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKEL 366
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 68/146 (46%), Gaps = 1/146 (0%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A ++F++M + +N ++ N+ K D+ LF L K G++PD+V+YN +I
Sbjct: 503 ALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDK-GVKPDVVTYNVMI 561
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
KGSL A+ L +M++ G D T+N L+ + ++ E M
Sbjct: 562 GGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFS 621
Query: 231 PNVRSYNARLDGLAIEKQTKKALELV 256
+ + +D L+ + K L+++
Sbjct: 622 ADSSTIKMVIDMLSDRRLDKSFLDML 647
>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Glycine max]
Length = 852
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 134/276 (48%), Gaps = 6/276 (2%)
Query: 87 KDISKEGFTA--RLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
+++ + GF L + M E AR+ F +M V S N LL S K
Sbjct: 174 RNVCRPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGG 233
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
FKD+ G+ P + +YN +I +G L++A +L EM+ KG+R D++T+N+L
Sbjct: 234 LALSFFKDMVVA-GLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSL 292
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+ G+ G A ++E M + P+V +YN+ ++ ++ +A E + M+ + +
Sbjct: 293 IDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGL 352
Query: 265 NPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFN 321
P+V T+ LI F G L EA +++ + G N+ + L+ C+ GDL+ AF
Sbjct: 353 QPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFK 412
Query: 322 LCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
L ++ ++D L ++ R+ EA+EL
Sbjct: 413 LESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEEL 448
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 115/230 (50%), Gaps = 10/230 (4%)
Query: 86 YKDISKEGFTARL------IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
+KD+ G + + I + E AR +F+EM + ++++N+L+
Sbjct: 239 FKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGK 298
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
+F+++ G EPD+++YN++I F + A L+ M+++G++ +++
Sbjct: 299 VGMLTGAVSVFEEMKDA-GCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVV 357
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
T++TL+ F G +A K + M+ + ++PN +Y + +D +A +L EM
Sbjct: 358 TYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEM 417
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLL 306
+ +N ++ T+ AL+ G +G + EA+ + K+G +N+ I+ L
Sbjct: 418 QQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSL 467
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 117/262 (44%), Gaps = 15/262 (5%)
Query: 40 LVDKFKKSSDLGRFRTNTGI--YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFT-- 95
L + FK S++ + N I YT + L R R EE+ + + K G+T
Sbjct: 407 LNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEEL------FGALLKAGWTLN 460
Query: 96 ----ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFK 151
L Y KA M E A + +EM +N + +L + + + ++ + +
Sbjct: 461 QQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIR 520
Query: 152 DLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSN 211
++ G+ + Y T+I A+ G A LL EM+ GI++ ++T+ L+ G
Sbjct: 521 EM-MDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKI 579
Query: 212 GRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTF 271
G A + ++ M ++PN+ Y A +DGL ++A L EM K I+PD +
Sbjct: 580 GLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVY 639
Query: 272 YALIKGFVNEGNLEEAKRWYNK 293
+LI G + GN EA N+
Sbjct: 640 TSLIDGNMKHGNPGEALSLRNR 661
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 95/219 (43%), Gaps = 13/219 (5%)
Query: 78 EILEHQKQYKDISKEGFTAR------LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFN 131
EI + +++ G TA LI Y K A + EM + TV+++
Sbjct: 511 EIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYG 570
Query: 132 ALL-GACVNSKKFDEVDGLFKDLPH--KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
L+ G C K V + H + G++P+++ Y +I L+ A L E
Sbjct: 571 VLIDGLC----KIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNE 626
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
M KGI D + + +L+ G +G +A + MV + + ++ +Y + + G + Q
Sbjct: 627 MLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQ 686
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+ A L+ EM K I PD L++ + G++ EA
Sbjct: 687 VQLAKSLLDEMLRKGIIPDQVLCICLLRKYYELGDINEA 725
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 88/234 (37%), Gaps = 35/234 (14%)
Query: 25 GSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQK 84
G+ I G+ ++N ++ + ++ D G N+ IYT + + +L+ +
Sbjct: 500 GTKIWGLCRQNEIEDSMAVIREMMDCG-LTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQ 558
Query: 85 QYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
LI K + + A + FD M + ++ + AL+ + +
Sbjct: 559 DLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLE 618
Query: 145 EVDGLFKDL------PHKL----------------------------GIEPDLVSYNTII 170
E LF ++ P KL G+E DL +Y ++I
Sbjct: 619 EAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLI 678
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
F G + A +LL EM +KGI D + LL +Y G +A + + M
Sbjct: 679 WGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYYELGDINEALALHDDM 732
>gi|224086982|ref|XP_002308024.1| predicted protein [Populus trichocarpa]
gi|222854000|gb|EEE91547.1| predicted protein [Populus trichocarpa]
Length = 789
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 125/268 (46%), Gaps = 7/268 (2%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K+ ++A +FDEM R ++ ++ SK+ D+ LF + G+ PD
Sbjct: 208 KSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDS-GVGPDF 266
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
V+ N ++ F +D A +LL EK G LD+ ++ L+ G + R+ D + ++
Sbjct: 267 VTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRK 326
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M+ NV+P+V Y + GLA + + ALEL+ EM + PD + LIKGF + G
Sbjct: 327 MIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGL 386
Query: 284 LEEAKRW---YNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL 340
L EA+ ++ C N + +L+ +C G A + C
Sbjct: 387 LSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNS 446
Query: 341 VVDRLAKELRVEEAKEL---VELGKTNS 365
++D L K ++E+A L +E+G+ S
Sbjct: 447 LIDGLCKTGQLEKAHLLFYKMEIGRNPS 474
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 143/313 (45%), Gaps = 20/313 (6%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
+IRG+++ + + ++K + + + +YT ++ LA A + R E+L +
Sbjct: 307 LIRGLFRAKRYEDVQLLYRKMIE-DNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTES 365
Query: 87 KDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDE 145
+ LI + + AR + E+ +C V +++ L+ G C N D
Sbjct: 366 GVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDA 425
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEME-----------KKGI 194
+ +F ++ KLG P V++N++I G L+ A+ L Y+ME +G
Sbjct: 426 QE-IFNEM-EKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSLFLRLSQGP 483
Query: 195 R--LDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKA 252
LD + ++ +G A +I + + P + +YN ++G A
Sbjct: 484 SHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGA 543
Query: 253 LELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPF 309
+L EM+ K ++PD T+ LI G + E+A + ++ K+GC + A+++ ++ +
Sbjct: 544 YKLFREMQFKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPDAAVYRTMMTW 603
Query: 310 VCEKGDLDFAFNL 322
+C + +L AF+L
Sbjct: 604 MCRRMELPRAFSL 616
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/308 (20%), Positives = 125/308 (40%), Gaps = 40/308 (12%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI +Y K + + A + F M +C V ++N +L + K F + KL
Sbjct: 132 LIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLIQ-KNFLLLALTVYTRMMKL 190
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
P++ +++ +I G++ A L EM ++GI D T+ ++ G + R DA
Sbjct: 191 NCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDA 250
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELV--------------------G 257
++++ M + V P+ + NA L+G + + +A L+ G
Sbjct: 251 YRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRG 310
Query: 258 EMRSKE---------------INPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMN 299
R+K + PDV+ + ++KG G + +A N +SG +
Sbjct: 311 LFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPD 370
Query: 300 KAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV- 358
+ +L+ C+ G L A +L C + +++ + + +A+E+
Sbjct: 371 TVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFN 430
Query: 359 ELGKTNSY 366
E+ K Y
Sbjct: 431 EMEKLGCY 438
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 76/170 (44%), Gaps = 3/170 (1%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
GI+ ++ +IK ++ G D A M D+ T+N +L A
Sbjct: 121 GIKVHNDAFFVLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLIQKNFLLLA 180
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ M+ +N PNV +++ +DGL K AL L EM + I PD FT+ +I G
Sbjct: 181 LTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISG 240
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCK 324
+++A R ++K SG G + L+ C +D AF+L +
Sbjct: 241 LCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLR 290
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/243 (20%), Positives = 93/243 (38%), Gaps = 56/243 (23%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLF------- 150
LI+ + + +A+++F+EM C + ++FN+L+ + + ++ LF
Sbjct: 412 LISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGR 471
Query: 151 ------------------------------KDLPHKL----------GIEPDLVSYNTII 170
L HK G P + +YN ++
Sbjct: 472 NPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILV 531
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
F G+ + A L EM+ KG+ D +T+ TL+ G R DA K+++ M
Sbjct: 532 NGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCT 591
Query: 231 PNVRSYNARLDGLAIEKQTKKALEL----VGEMRSKEINPDVFTFYALIKGFVNEGNLEE 286
P+ Y + + + +A L + +RS+E I+G+ + +E+
Sbjct: 592 PDAAVYRTMMTWMCRRMELPRAFSLWLKYLRNIRSQEDEA-----IKAIEGYFEKQEVEK 646
Query: 287 AKR 289
A R
Sbjct: 647 AVR 649
Score = 45.1 bits (105), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 87/205 (42%), Gaps = 3/205 (1%)
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
S + I +++ L+ L ++ GI++ F L+ + G A + + +M
Sbjct: 93 SCDLITDLLINQNGLELYCQTLEALKNGGIKVHNDAFFVLIKVYLKMGLTDKAMETFGSM 152
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
+ + P+V +YN LD L + AL + M P+V TF LI G GN+
Sbjct: 153 RDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNV 212
Query: 285 EEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLV 341
++A ++ + G + + +++ +C +D A+ L + D +
Sbjct: 213 KDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNAL 272
Query: 342 VDRLAKELRVEEAKELVELGKTNSY 366
++ RV+EA L+ L + + Y
Sbjct: 273 LNGFCMLDRVDEAFSLLRLFEKDGY 297
>gi|410109879|gb|AFV61019.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
macrostachya]
Length = 414
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 153/334 (45%), Gaps = 30/334 (8%)
Query: 66 RLANAKRFRWI-----EEILEHQKQ----------YKDISKEGFTARL------IALYGK 104
RL +F W+ ++LEH + Y++I + G+ A L + + K
Sbjct: 79 RLTREHKF-WVPFDTCRKVLEHMMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCK 137
Query: 105 AAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLV 164
A+ VF+ + +V+SFN L+ + DE L K H G++PD+
Sbjct: 138 EGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRL-KSAMHASGVQPDVY 196
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
+Y+ +I + +D AN L EM KG+ + +TF TL+ G +GR A +I++ M
Sbjct: 197 TYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKSGRVDLAMEIYKQM 256
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
++ ++ P++ +YN + GL + K+A +L+ EM K + PD T+ LI G EG+L
Sbjct: 257 LSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDL 316
Query: 285 E---EAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLV 341
E E ++ + ++ + L+ +C++G A + + S D ++
Sbjct: 317 ETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSAGLKPDTGTYTMI 376
Query: 342 VDRLAKELRVEEA----KELVELGKTNSYCRYNL 371
++ K+ V KE+ G S YN+
Sbjct: 377 INEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNV 410
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 88/180 (48%), Gaps = 1/180 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K+ + A +++ +M ++ ++++N L+ + L ++ K
Sbjct: 236 LIDGHCKSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMK- 294
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD ++Y T+I +G L++A M ++ IRLD + + L+ G GR+ DA
Sbjct: 295 GLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDA 354
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
EK+ M++ ++P+ +Y ++ + +L+ EM+ P V T+ L+ G
Sbjct: 355 EKVLREMLSAGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMNG 414
>gi|255660846|gb|ACU25592.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
Length = 418
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 137/283 (48%), Gaps = 10/283 (3%)
Query: 86 YKDISKEGFTARL------IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
YK+I + G+ A L + + K A+ VFD + +V+SFN L+ +
Sbjct: 124 YKEILECGYPASLYFFNILMHRFCKEGEIWIAQSVFDSITKWGLRPSVVSFNTLMNGYIR 183
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
D+ L K+ H G++PD+ +Y+ +I + ++ AN L EM KG+ + +
Sbjct: 184 LGDLDQGFKL-KNAMHASGVQPDVYTYSVLINGLCKESKMNEANDLFNEMLDKGLVPNGV 242
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
TF TL+ G NG+ A + ++ M++ P++ +YN + GL + K+A +L+ EM
Sbjct: 243 TFTTLIDGHCKNGKVDSAMETYKQMLSQCFLPDLITYNTLIYGLCKKGDLKQAQDLLDEM 302
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLEEA---KRWYNKSGCGMNKAIFKLLVPFVCEKGDL 316
R K + PD T+ LI G EG+L+ A + K ++ + L+ +C++G
Sbjct: 303 RMKGLKPDKITYTTLIDGNCKEGDLDSAFELRETMVKESIRLDDVAYTALISGLCQEGRA 362
Query: 317 DFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
A + + S D ++++ K+ V+ A +L++
Sbjct: 363 TDAEKMLREMLSVGLKPDNGTYTMIINEFCKKEDVKTAAKLLK 405
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 87/173 (50%), Gaps = 1/173 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K ++A + + +M + ++++N L+ + L ++ K
Sbjct: 247 LIDGHCKNGKVDSAMETYKQMLSQCFLPDLITYNTLIYGLCKKGDLKQAQDLLDEMRMK- 305
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD ++Y T+I +G LDSA L M K+ IRLD + + L+ G GR DA
Sbjct: 306 GLKPDKITYTTLIDGNCKEGDLDSAFELRETMVKESIRLDDVAYTALISGLCQEGRATDA 365
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
EK+ M+++ ++P+ +Y ++ ++ K A +L+ EM+ + P V T
Sbjct: 366 EKMLREMLSVGLKPDNGTYTMIINEFCKKEDVKTAAKLLKEMQRQGHVPCVVT 418
>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 784
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 133/268 (49%), Gaps = 12/268 (4%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
++ Y K +NA +M ++FN L+ + + E + ++ K
Sbjct: 393 VVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRK- 451
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++ + V+ NTI+ + LD A LL K+G +D +++ TL++G++ +G+ +A
Sbjct: 452 GLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEA 511
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
K+W+ M + P++ +YN + GL +T ++++ + E+ + PD T+ +I G
Sbjct: 512 MKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILG 571
Query: 278 FVNEGNLEEAKRWYNKSGCGMNKAIFK-------LLVPFVCEKGDLDFAFNLCKRTFSER 330
+ EG +E+A +++NK M K FK +L+ +C +G LD A L S+
Sbjct: 572 YCREGQVEKAFQFHNK----MVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKG 627
Query: 331 CLVDQAPLQLVVDRLAKELRVEEAKELV 358
+D ++ L KE R EEA +L+
Sbjct: 628 KAIDAVTYNTIISGLCKEDRFEEAFDLL 655
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 126/258 (48%), Gaps = 5/258 (1%)
Query: 39 RLVDKFKKSSDLGR--FRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTA 96
RL + F+ ++ R + N+ + L ++ ++L + E
Sbjct: 437 RLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYG 496
Query: 97 RLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE-VDGLFKDLPH 155
LI Y K A K++DEM + +++++N ++G +S K D+ +D L + L
Sbjct: 497 TLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLES 556
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
G+ PD +YNTII + +G ++ A +M KK + DL T N LL G + G
Sbjct: 557 --GLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLD 614
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
A K++ T ++ + +YN + GL E + ++A +L+ EM K++ PD +T+ A++
Sbjct: 615 KALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAIL 674
Query: 276 KGFVNEGNLEEAKRWYNK 293
+ G ++EA+ + ++
Sbjct: 675 SALADAGRMKEAEEFMSR 692
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 126/272 (46%), Gaps = 8/272 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI Y KA A ++ DEM + + ++ N +L +K D+ L K
Sbjct: 428 LINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSS-ASKR 486
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G D VSY T+I + G A L EM++K I +IT+NT++ G +G+ +
Sbjct: 487 GYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQS 546
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ + P+ +YN + G E Q +KA + +M K PD+FT L++G
Sbjct: 547 IDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRG 606
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
EG L++A + +N G ++ + ++ +C++ + AF+L ++ D
Sbjct: 607 LCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPD 666
Query: 335 QAPLQLVVDRLAKELRVEEAKE----LVELGK 362
++ LA R++EA+E +VE GK
Sbjct: 667 CYTYNAILSALADAGRMKEAEEFMSRIVEQGK 698
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 122/294 (41%), Gaps = 39/294 (13%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
++ +F ++ + +FN L+ C K E GL + PD VSYNTI+
Sbjct: 196 SKAIFSDVIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKM-KDFSCFPDNVSYNTIL 254
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
KG L+ A LL +M+ G+ + TFN L+ G+ G +A ++ + M NV
Sbjct: 255 DVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVL 314
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG------------- 277
P+V +YN + GL + + +A L EM + ++ PDV T+ LI G
Sbjct: 315 PDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFEL 374
Query: 278 ----------------------FVNEGNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCE 312
+V EG ++ A R +SG + F L+ C+
Sbjct: 375 IDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCK 434
Query: 313 KGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKTNSY 366
G L AF + + ++ L ++ L E ++++A +L+ Y
Sbjct: 435 AGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGY 488
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 106/210 (50%), Gaps = 7/210 (3%)
Query: 119 PGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFV---D 175
P + + + + +GA V + +F + +L ++P+L++ NT+I A V
Sbjct: 131 PFKKVQSLRVILDTSIGAYVACNRPHHAAQIFNRM-KRLHLKPNLLTCNTLINALVRYPS 189
Query: 176 KGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRS 235
K S+ + + ++ K G++++ TFN L+ G + ++A + M + + P+ S
Sbjct: 190 KPSVYLSKAIFSDVIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVS 249
Query: 236 YNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN--- 292
YN LD L + + +A +L+ +M++ + P+ TF L+ G+ G L+EA + +
Sbjct: 250 YNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMA 309
Query: 293 KSGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
++ + + +L+ +C+ G +D AF L
Sbjct: 310 QNNVLPDVWTYNMLIGGLCKDGKIDEAFRL 339
>gi|115473111|ref|NP_001060154.1| Os07g0590600 [Oryza sativa Japonica Group]
gi|34393454|dbj|BAC82993.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113611690|dbj|BAF22068.1| Os07g0590600 [Oryza sativa Japonica Group]
Length = 784
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 130/263 (49%), Gaps = 4/263 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI+ + A+++ A +VFDEM E ++FN+LL +++ DE + +++ ++
Sbjct: 249 LISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEM-ERV 307
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G P +V+YN++I ++V G L+ A L EME KG++ D++T+ TL+ G G+ A
Sbjct: 308 GCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAA 367
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ MV +PN+ +YNA + + + + + + E RS PD+ T+ L+
Sbjct: 368 IVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAV 427
Query: 278 FVNEGNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
F G E + K+G + + L+ G D A + KR D
Sbjct: 428 FGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPD 487
Query: 335 QAPLQLVVDRLAKELRVEEAKEL 357
+ V+ LA+ R E+A++L
Sbjct: 488 VSTYNAVLSALARGGRWEQAEKL 510
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 98/191 (51%), Gaps = 1/191 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI+ +A + A +DEM C+ + ++NAL+ KF E+ +F +
Sbjct: 354 LISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEF-RSA 412
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G PD+V++NT++ F G + + EM+K G + T+ +L+ + G F A
Sbjct: 413 GFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLA 472
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+I++ M+ + P+V +YNA L LA + ++A +L EM ++ PD +++ +L+
Sbjct: 473 MQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHA 532
Query: 278 FVNEGNLEEAK 288
+ N L++ K
Sbjct: 533 YANAKRLDKMK 543
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 105/221 (47%), Gaps = 10/221 (4%)
Query: 93 GFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSK---KFDEVDGL 149
+TA L++ + +A F +A VF M + ++++N +L V SK + EV L
Sbjct: 174 AYTA-LVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLH--VYSKMAVPWKEVVEL 230
Query: 150 FKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFY 209
+ G+ PD +YNT+I + A + EM+ G D +TFN+LL +
Sbjct: 231 VASMKEH-GVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYG 289
Query: 210 SNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVF 269
R +A ++ + M + P+V +YN+ + + ++A+ L EM K + PDV
Sbjct: 290 KARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVV 349
Query: 270 TFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLV 307
T+ LI G G ++ A Y+ ++GC N + L+
Sbjct: 350 TYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALI 390
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 76/145 (52%), Gaps = 1/145 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
++++YGK M K+ M + ++N+L+ ++ + + ++
Sbjct: 599 MVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSS- 657
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ PD SYNT+I A+ KG + A+ L EM+ G++ D++T+N + + SN F +A
Sbjct: 658 GVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEA 717
Query: 218 EKIWETMVNMNVRPNVRSYNARLDG 242
++ MV +PN R+YN+ ++G
Sbjct: 718 IELVRYMVTQGCKPNERTYNSIVEG 742
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 128/280 (45%), Gaps = 15/280 (5%)
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
Y D+S + A L AL + +E A K+F EM R+C+ S+++LL A N+K+ D+
Sbjct: 485 YPDVST--YNAVLSAL-ARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDK 541
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGS----LDSANTLLYEMEKKGIRLDLITF 201
+ L D+ + IEP +N ++K V S L A E+ +K LD+
Sbjct: 542 MKALSDDI-YSERIEP----HNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVL 596
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS 261
N ++ + N EKI M + + +YN+ + + +K ++ E++S
Sbjct: 597 NAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKS 656
Query: 262 KEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDF 318
+ PD +++ +I + +G ++EA R +++ SG + + + V +
Sbjct: 657 SGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEE 716
Query: 319 AFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
A L + ++ C ++ +V+ + ++ +AK V
Sbjct: 717 AIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAKIFV 756
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 105/229 (45%), Gaps = 1/229 (0%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMP 119
Y+ + ANAKR ++ + + + L+ + K A K F E+
Sbjct: 526 YSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELR 585
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL 179
+ C + NA++ ++ +V+ + L + I +YN+++ + G
Sbjct: 586 QKRCSLDINVLNAMVSIYGKNRMVRKVEKIL-SLMKESAINLSAATYNSLMHMYSRLGDC 644
Query: 180 DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNAR 239
+ +L E++ G+R D ++NT++ + G+ +A +++ M ++P+V +YN
Sbjct: 645 EKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIF 704
Query: 240 LDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
+ ++A+ELV M ++ P+ T+ ++++G+ G L +AK
Sbjct: 705 VKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAK 753
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 8/144 (5%)
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
T I+ G L A+ LL D + L+ F GRF DA ++ MV+
Sbjct: 146 TAIRVMARAGRLAEASALL----DAAPGPDAGAYTALVSAFSRAGRFRDAVAVFRRMVDS 201
Query: 228 NVRPNVRSYNARLDGLA-IEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEE 286
V+P + +YN L + + K+ +ELV M+ + PD +T+ LI +E
Sbjct: 202 GVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKE 261
Query: 287 AKRWYNK---SGCGMNKAIFKLLV 307
A + +++ SG +K F L+
Sbjct: 262 AAQVFDEMKASGFEPDKVTFNSLL 285
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/200 (20%), Positives = 78/200 (39%), Gaps = 41/200 (20%)
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSN--------- 211
PD +Y ++ AF G A + M G++ ++T+N ++L YS
Sbjct: 170 PDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYN-VVLHVYSKMAVPWKEVV 228
Query: 212 ----------------------------GRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
+ +A ++++ M P+ ++N+ LD
Sbjct: 229 ELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVY 288
Query: 244 AIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA---KRWYNKSGCGMNK 300
++ +A+E++ EM P V T+ +LI +V +G LE+A K+ G +
Sbjct: 289 GKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDV 348
Query: 301 AIFKLLVPFVCEKGDLDFAF 320
+ L+ + G +D A
Sbjct: 349 VTYTTLISGLDRAGKIDAAI 368
>gi|147778634|emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]
Length = 1494
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 139/272 (51%), Gaps = 15/272 (5%)
Query: 96 ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPH 155
A ++++ GKA A ++F TV +NA++G + +F +V L DL
Sbjct: 224 ATILSVLGKANQEALAVEIFARAEAAX-GNTVQVYNAMMGVYARTGRFTKVQELL-DLMR 281
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDS--ANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
G EPDLVS+NT+I A + G++ + A LL E+ + GI+ D+IT+NTL+
Sbjct: 282 SRGCEPDLVSFNTLINARLKSGTMVTNLAIELLNEVRRSGIQPDIITYNTLISACSRESN 341
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
+A K++ MV +P++ +YNA + +++A L ++ SK PD T+ +
Sbjct: 342 LEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNS 401
Query: 274 LIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSER 330
L+ F EGN+++ K K G G ++ + ++ ++G D AF L +S+
Sbjct: 402 LLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQL----YSDM 457
Query: 331 CLVDQAP----LQLVVDRLAKELRVEEAKELV 358
L ++P +++D L K ++EA E++
Sbjct: 458 KLSGRSPDAVTYTVLIDSLGKANMIKEAAEVM 489
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 132/268 (49%), Gaps = 10/268 (3%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL---GACVNSKKFDEVDGLFKDLP 154
LI+ + + E A KV+++M C+ + ++NA++ G C S+ E LFKDL
Sbjct: 332 LISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSR---EAGRLFKDLE 388
Query: 155 HKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRF 214
K G PD V+YN+++ AF +G++D + +M K G D +T+NT++ + G+
Sbjct: 389 SK-GFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQH 447
Query: 215 ADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYAL 274
A +++ M P+ +Y +D L K+A E++ EM + + P + TF AL
Sbjct: 448 DLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNAXVKPTLRTFSAL 507
Query: 275 IKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERC 331
I G+ G EA+ ++ +SG + + +++ + + A L +
Sbjct: 508 ICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLRFNESGKAMKLYQEMVLHSF 567
Query: 332 LVDQAPLQLVVDRLAKELRVEEAKELVE 359
D A ++++ L KE R E+ ++V+
Sbjct: 568 KPDHALYEVMLRVLGKENREEDVHKVVK 595
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/300 (18%), Positives = 123/300 (41%), Gaps = 39/300 (13%)
Query: 46 KSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKA 105
++ + G + I+TG ++ K ++ E ++ +Q + LI Y +
Sbjct: 768 QAEEKGLLFDDVSIHTGVIEAYGKLKLWQKAESLVGSLRQKCTMVDRKVWNALIHAYAAS 827
Query: 106 AMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVS 165
+E AR +F+ M TV S N L+ A + + DE+ + ++L +G + S
Sbjct: 828 GCYERARAIFNTMMRDGPSPTVDSVNGLMQALIVDGRLDELYVVIQEL-QDMGFKISKSS 886
Query: 166 YNTIIKAFVDKGSL-----------------------------------DSANTLLYEME 190
++ AF G++ ++ EME
Sbjct: 887 ITLMLDAFAHAGNIFEVKKIYQGMKAAGYFPTMHLYRIMIGLLAKGKRVRDVEAMVSEME 946
Query: 191 KKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTK 250
+ DL +N++L + G F ++++ + ++P+ +YN + +++ +
Sbjct: 947 VAXFKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPE 1006
Query: 251 KALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLV 307
+ L L+ EMR + P + T+ +LI F +E+A+ + C ++++ + +++
Sbjct: 1007 EGLSLMHEMRRVGLEPKLDTYKSLISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHIMM 1066
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/272 (19%), Positives = 117/272 (43%), Gaps = 14/272 (5%)
Query: 24 IGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQ 83
+ +++ + + L L ++ D+G F+ + T + A+A I E +
Sbjct: 852 VNGLMQALIVDGRLDELYVVIQELQDMG-FKISKSSITLMLDAFAHAGN------IFEVK 904
Query: 84 KQYKDISKEGFTARL------IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGAC 137
K Y+ + G+ + I L K + + EM + + +N++L
Sbjct: 905 KIYQGMKAAGYFPTMHLYRIMIGLLAKGKRVRDVEAMVSEMEVAXFKPDLSIWNSVLKLY 964
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLD 197
F + +++ L + G++PD +YNT+I + + +L++EM + G+
Sbjct: 965 TGIGDFKKTGQVYQ-LIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGLEPK 1023
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
L T+ +L+ F AE+++E +++ + + Y+ + KA +L+G
Sbjct: 1024 LDTYKSLISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHIMMKMFRNSGNHSKAEKLLG 1083
Query: 258 EMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
M+ + P + T + L+ + G EEA++
Sbjct: 1084 VMKEAGVEPTIATMHLLMVSYSGSGQPEEAEK 1115
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/262 (19%), Positives = 105/262 (40%), Gaps = 44/262 (16%)
Query: 78 EILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMP--GRNCEQTVLSFNALLG 135
E+L+ +++ S + LI + KA +A + + + G C + + +LL
Sbjct: 658 ELLDFLREHSSGSHQLINEALIIMLCKAHQLGDALREYGKARDFGLFCGSFTM-YESLLL 716
Query: 136 ACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIR 195
C ++ F E +F D+ G+EP Y +++ + G ++A+ L+ + E+KG+
Sbjct: 717 CCEENELFAEASQIFSDMRF-YGVEPSDHLYRSMVVTYCKMGFPETAHYLIDQAEEKGLL 775
Query: 196 LDLIT------------------------------------FNTLLLGFYSNGRFADAEK 219
D ++ +N L+ + ++G + A
Sbjct: 776 FDDVSIHTGVIEAYGKLKLWQKAESLVGSLRQKCTMVDRKVWNALIHAYAASGCYERARA 835
Query: 220 IWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFV 279
I+ TM+ P V S N + L ++ + + ++ E++ + ++ F
Sbjct: 836 IFNTMMRDGPSPTVDSVNGLMQALIVDGRLDELYVVIQELQDMGFKISKSSITLMLDAFA 895
Query: 280 NEGNLEEAKRWYNKSGCGMNKA 301
+ GN+ E K+ Y GM A
Sbjct: 896 HAGNIFEVKKIYQ----GMKAA 913
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/233 (18%), Positives = 102/233 (43%), Gaps = 2/233 (0%)
Query: 51 GRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFEN 110
G F T +Y + LA KR R +E ++ + ++ LY F+
Sbjct: 914 GYFPT-MHLYRIMIGLLAKGKRVRDVEAMVSEMEVAXFKPDLSIWNSVLKLYTGIGDFKK 972
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
+V+ + + ++N L+ ++ +E L ++ ++G+EP L +Y ++I
Sbjct: 973 TGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEM-RRVGLEPKLDTYKSLI 1031
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
AF ++ A L + K +LD ++ ++ F ++G + AEK+ M V
Sbjct: 1032 SAFGKLQMVEQAEELFEGLLSKECKLDRSFYHIMMKMFRNSGNHSKAEKLLGVMKEAGVE 1091
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
P + + + + + Q ++A +++ ++ + + + ++I ++ G+
Sbjct: 1092 PTIATMHLLMVSYSGSGQPEEAEKVLDNLKVEGLPLSTLPYSSVIDAYLKNGD 1144
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 43/241 (17%), Positives = 104/241 (43%), Gaps = 1/241 (0%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
++ G+ + R V+ ++ F+ + I+ ++ F+ ++ + ++
Sbjct: 924 IMIGLLAKGKRVRDVEAMVSEMEVAXFKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEA 983
Query: 87 KDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEV 146
E LI +Y + E + EM E + ++ +L+ A + ++
Sbjct: 984 GLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGLEPKLDTYKSLISAFGKLQMVEQA 1043
Query: 147 DGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLL 206
+ LF+ L K + D Y+ ++K F + G+ A LL M++ G+ + T + L++
Sbjct: 1044 EELFEGLLSK-ECKLDRSFYHIMMKMFRNSGNHSKAEKLLGVMKEAGVEPTIATMHLLMV 1102
Query: 207 GFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINP 266
+ +G+ +AEK+ + + + + Y++ +D A++ + EM+ + P
Sbjct: 1103 SYSGSGQPEEAEKVLDNLKVEGLPLSTLPYSSVIDAYLKNGDHNVAIQKLMEMKKDGLEP 1162
Query: 267 D 267
D
Sbjct: 1163 D 1163
>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Vitis vinifera]
Length = 665
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 115/233 (49%), Gaps = 17/233 (7%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI Y KA A + E+ V +++ L+ + +E DGL +++ K
Sbjct: 339 LIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKK- 397
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G P+ V+YNT+I + +G+++ A + +M +KGI ++ITF+TL+ G+ G+ A
Sbjct: 398 GFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAA 457
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ MV + P+V +Y A +DG + TK+A L EM+ ++P+VFT LI G
Sbjct: 458 MGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDG 517
Query: 278 FVNEGNLEEAKRWY----------------NKSGCGMNKAIFKLLVPFVCEKG 314
+G + +A + + ++S C N ++ L+ +C G
Sbjct: 518 LCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDG 570
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 153/362 (42%), Gaps = 20/362 (5%)
Query: 15 TATATGPKFI--GSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKR 72
A P + G++I G ++ + + F + + F T IYT ++ L R
Sbjct: 185 VARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVV-IYTILIRGLCGESR 243
Query: 73 FRWIEEILEHQKQYKDISKEGFTARLIAL------YGKAAMFENARKVFDEMPGRNCEQT 126
I E + ++ + G L Y K A + A +++ EM G
Sbjct: 244 ------ISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPN 297
Query: 127 VLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLL 186
V++F L+ + + D+ G+ P++ YN +I + G+L A +L
Sbjct: 298 VVTFGILIDGLCKTDEMVSARKFLIDMA-SFGVVPNIFVYNCLIDGYCKAGNLSEALSLH 356
Query: 187 YEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIE 246
E+EK I D+ T++ L+ G R +A+ + + M PN +YN +DG E
Sbjct: 357 SEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKE 416
Query: 247 KQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIF 303
+KA+E+ +M K I P++ TF LI G+ G +E A Y + G + +
Sbjct: 417 GNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAY 476
Query: 304 KLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKT 363
L+ + G+ AF L K + L ++D L K+ R+ +A +L L KT
Sbjct: 477 TALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLF-LAKT 535
Query: 364 NS 365
+
Sbjct: 536 GT 537
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 134/301 (44%), Gaps = 10/301 (3%)
Query: 64 VQRLANAKRFRWIEEILE--HQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGR 121
+Q L N++R R + + + + F +IA + + + E A V+ +M
Sbjct: 97 IQCLQNSRRSRICCSVFNVLSRLESSKFTPNVFGVLIIA-FSEMGLVEEALWVYYKMDVL 155
Query: 122 NCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDS 181
Q N +L V +FD + ++ D+ + G P++V+Y T+I +G
Sbjct: 156 PAMQAC---NMVLDGLVKKGRFDTMWKVYGDMVAR-GASPNVVTYGTLIDGCCRQGDFLK 211
Query: 182 ANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLD 241
A L EM +K I ++ + L+ G R ++AE ++ TM N + PN+ +YN +D
Sbjct: 212 AFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMD 271
Query: 242 GLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW---YNKSGCGM 298
G KKALEL EM + P+V TF LI G + A+++ G
Sbjct: 272 GYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVP 331
Query: 299 NKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
N ++ L+ C+ G+L A +L L D +++ L R+EEA L+
Sbjct: 332 NIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLL 391
Query: 359 E 359
+
Sbjct: 392 Q 392
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 114/289 (39%), Gaps = 50/289 (17%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMP 119
Y+ ++ L R + +L+ K+ + LI Y K E A +V +M
Sbjct: 371 YSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMT 430
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL 179
+ E +++F+ L+ + K + GL+ ++ K G+ PD+V+Y +I G+
Sbjct: 431 EKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIK-GLLPDVVAYTALIDGHFKDGNT 489
Query: 180 DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV---------- 229
A L EM++ G+ ++ T + L+ G +GR +DA K++ +
Sbjct: 490 KEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDR 549
Query: 230 ---RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI----------- 275
PN Y A + GL + + KA + +MR + PDVFT +I
Sbjct: 550 SLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRD 609
Query: 276 ------------------------KGFVNEGNLEEAKRWY-NKSGCGMN 299
KG+ G L+ A R + SG G+
Sbjct: 610 VMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALRCSEDLSGIGIG 658
>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
Length = 570
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 153/338 (45%), Gaps = 19/338 (5%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
V+ G+ K + +D F+ ++ G + YT V LA K+ + ++E
Sbjct: 136 VLHGLCKSGKVLAAMDHFETTTTNG-CTIDIHTYTAIVDWLAKNKKIQDAVALME----- 189
Query: 87 KDISKEGFTARLIALYG-------KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
I+ G T IA Y K E A + ++ C V+++ +L+
Sbjct: 190 -KITANGCTPT-IATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGK 247
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
K+ E LFK++ + G+ D V Y +I+ + G + A+++ M +G D++
Sbjct: 248 EKRSFEAYKLFKEMALR-GLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVV 306
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
T +T++ G GR A +I+++M + PN Y+A + GL ++ ALE++ +M
Sbjct: 307 TLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQM 366
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDL 316
+ PD T+ LI G G++E A+ +++ ++GC + + +LV C+ G+
Sbjct: 367 KKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNT 426
Query: 317 DFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA 354
D A + S C + ++ L K ++ +A
Sbjct: 427 DAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKA 464
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 132/308 (42%), Gaps = 22/308 (7%)
Query: 26 SVIRGIYKENNLKRLVDKFK--KSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQ 83
S+I G+ KE KR + +K K L +T YT ++ L A + I +
Sbjct: 240 SLIDGLGKE---KRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGK------IPQAS 290
Query: 84 KQYKDISKEGFTARLIAL------YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGAC 137
YK ++ +G ++ L KA A ++F M R + ++AL+
Sbjct: 291 SVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGL 350
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLD 197
++K D + + K PD ++YN +I G +++A EM + G + D
Sbjct: 351 CKARKMDCALEMLAQM-KKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPD 409
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
+ T+N L+ GF G A +++ M + + PNV +Y + GL +Q KA
Sbjct: 410 VYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQ 469
Query: 258 EMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKG 314
M+ + PD F + +L+ G G LE ++ +SG N L+ +C+
Sbjct: 470 HMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVA-NSQTRTRLIFHLCKAN 528
Query: 315 DLDFAFNL 322
+D A +L
Sbjct: 529 RVDEAVSL 536
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 106/231 (45%), Gaps = 3/231 (1%)
Query: 127 VLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLL 186
V ++N L+ +++ +E + +++ G+ P L ++N ++ G + +A
Sbjct: 94 VETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHF 153
Query: 187 YEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIE 246
G +D+ T+ ++ N + DA + E + P + +YNA L+GL
Sbjct: 154 ETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKM 213
Query: 247 KQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIF 303
+ ++A++L+ ++ PDV T+ +LI G E EA + + + G ++ +
Sbjct: 214 GRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCY 273
Query: 304 KLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA 354
L+ + + G + A ++ K S+ C+ D L ++D L K R+ A
Sbjct: 274 TALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAA 324
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 99/237 (41%), Gaps = 38/237 (16%)
Query: 124 EQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIE--PDLVSYNTIIKAFVDKGSLDS 181
+ +V + NALL +K+ E L K+ +L PD+ ++N +I + +
Sbjct: 56 QHSVHTGNALLDVFARTKRHREAGNLLKN---ELATTFLPDVETWNVLITGYCLAREPEE 112
Query: 182 ANTLLYEMEKK-GIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARL 240
A ++ EME+ G+ L T N +L G +G+ A +ET ++ +Y A +
Sbjct: 113 AFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIV 172
Query: 241 DGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNK 300
D LA K+ + A+ L+ ++ + P + T+ AL+ G
Sbjct: 173 DWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGL---------------------- 210
Query: 301 AIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
C+ G L+ A +L ++ C D ++D L KE R EA +L
Sbjct: 211 ----------CKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKL 257
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 9/153 (5%)
Query: 216 DAEKIWETMVNMN-----VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
DA+ WE ++ + +V + NA LD A K+ ++A L+ + PDV T
Sbjct: 37 DADLAWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVET 96
Query: 271 FYALIKGFVNEGNLEEA----KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRT 326
+ LI G+ EEA + G + L++ +C+ G + A + + T
Sbjct: 97 WNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETT 156
Query: 327 FSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ C +D +VD LAK ++++A L+E
Sbjct: 157 TTNGCTIDIHTYTAIVDWLAKNKKIQDAVALME 189
>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22470, mitochondrial; Flags: Precursor
gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 132/257 (51%), Gaps = 4/257 (1%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K F++A +F+EM + + V+++++L+G N K+D+ + +++ + I PD+
Sbjct: 257 KDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGR-NIIPDV 315
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
V+++ +I FV +G L A L EM +GI D IT+N+L+ GF +A ++++
Sbjct: 316 VTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDL 375
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
MV+ P++ +Y+ ++ K+ + L E+ SK + P+ T+ L+ GF G
Sbjct: 376 MVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGK 435
Query: 284 LEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL 340
L AK + + G + + +L+ +C+ G+L+ A + ++ R + +
Sbjct: 436 LNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNI 495
Query: 341 VVDRLAKELRVEEAKEL 357
++ + +V++A L
Sbjct: 496 IIHGMCNASKVDDAWSL 512
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 128/252 (50%), Gaps = 5/252 (1%)
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
F+A LI ++ K A+++++EM R +++N+L+ E + +F DL
Sbjct: 318 FSA-LIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMF-DL 375
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
G EPD+V+Y+ +I ++ +D L E+ KG+ + IT+NTL+LGF +G+
Sbjct: 376 MVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGK 435
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
A+++++ MV+ V P+V +Y LDGL + KALE+ +M+ + + +
Sbjct: 436 LNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNI 495
Query: 274 LIKGFVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSER 330
+I G N +++A + + G + + +++ +C+KG L A L ++ +
Sbjct: 496 IIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDG 555
Query: 331 CLVDQAPLQLVV 342
C D +++
Sbjct: 556 CTPDDFTYNILI 567
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 112/214 (52%), Gaps = 4/214 (1%)
Query: 149 LFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
LF+ + + I+ +V Y+ +I + GS D A +L EME KGI+ D++T+++L+ G
Sbjct: 232 LFRKMEER-NIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGL 290
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDV 268
++G++ D K+ M+ N+ P+V +++A +D E + +A EL EM ++ I PD
Sbjct: 291 CNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDT 350
Query: 269 FTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKR 325
T+ +LI GF E L EA + ++ GC + + +L+ C+ +D L +
Sbjct: 351 ITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFRE 410
Query: 326 TFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
S+ + + +V + ++ AKEL +
Sbjct: 411 ISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQ 444
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 109/248 (43%), Gaps = 42/248 (16%)
Query: 78 EILEHQKQYKDISKEGFTA------RLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFN 131
++LE ++ Y ++ G LI + K A ++FD M + CE +++++
Sbjct: 330 KLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYS 389
Query: 132 ALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEK 191
L+ + +K+ D+ LF+++ K G+ P+ ++YNT++ F G L++A L EM
Sbjct: 390 ILINSYCKAKRVDDGMRLFREISSK-GLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVS 448
Query: 192 KGIRLDLITFNTLLLGFYSNGRFADAEKIWETM--------------------------- 224
+G+ ++T+ LL G NG A +I+E M
Sbjct: 449 RGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDD 508
Query: 225 --------VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
+ V+P+V +YN + GL + +A L +M+ PD FT+ LI+
Sbjct: 509 AWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIR 568
Query: 277 GFVNEGNL 284
+ L
Sbjct: 569 AHLGGSGL 576
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 98/203 (48%), Gaps = 3/203 (1%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G +PD V+Y ++ G+ A L +ME++ I+ ++ ++ ++ +G F DA
Sbjct: 205 GFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDA 264
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ M ++ +V +Y++ + GL + + +++ EM + I PDV TF ALI
Sbjct: 265 LSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDV 324
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
FV EG L EAK YN+ G + + L+ C++ L A + S+ C D
Sbjct: 325 FVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPD 384
Query: 335 QAPLQLVVDRLAKELRVEEAKEL 357
++++ K RV++ L
Sbjct: 385 IVTYSILINSYCKAKRVDDGMRL 407
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 120/285 (42%), Gaps = 37/285 (12%)
Query: 110 NARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD---------EVDGLFKDL------- 153
+A +F+ M T + FN L A +K++D E++G+ D+
Sbjct: 53 DAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMI 112
Query: 154 ------------------PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIR 195
KLG EPD ++++T++ F +G + A L+ M + R
Sbjct: 113 NCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQR 172
Query: 196 LDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALEL 255
DL+T +TL+ G GR ++A + + MV +P+ +Y L+ L + AL+L
Sbjct: 173 PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDL 232
Query: 256 VGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCE 312
+M + I V + +I +G+ ++A +N+ G + + L+ +C
Sbjct: 233 FRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCN 292
Query: 313 KGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
G D + + + D ++D KE ++ EAKEL
Sbjct: 293 DGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKEL 337
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 68/146 (46%), Gaps = 1/146 (0%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A ++F++M + +N ++ N+ K D+ LF L K G++PD+V+YN +I
Sbjct: 474 ALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDK-GVKPDVVTYNVMI 532
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
KGSL A+ L +M++ G D T+N L+ + ++ E M
Sbjct: 533 GGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFS 592
Query: 231 PNVRSYNARLDGLAIEKQTKKALELV 256
+ + +D L+ + K L+++
Sbjct: 593 ADSSTIKMVIDMLSDRRLDKSFLDML 618
>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 665
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 147/333 (44%), Gaps = 36/333 (10%)
Query: 59 IYTGTVQRLANAKRFRWIEEILEHQKQ-YKDISKEGFTARLIALYGKAAMFENARKVFDE 117
IY + + + RF+ IE I + K+ K+ + + L AL K + A K+ E
Sbjct: 151 IYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALC-KNNRVDGACKLLVE 209
Query: 118 MPGRNCEQTVLSF------------------------------NALLGACVNSKKFDEVD 147
M + CE V+S+ NAL+ K EV
Sbjct: 210 MSNKGCEPDVVSYTTVISSMSKLGKVEEARELSIRFQPNVSVYNALINGFCREYKVKEVF 269
Query: 148 GLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLG 207
L + K GI+P++++Y+T+I + G+++ A + +M +G ++ TF +L+ G
Sbjct: 270 LLLGQMVEK-GIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKG 328
Query: 208 FYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPD 267
++ GR +A IW M PNV +YN + GL + +A+ + +M +P+
Sbjct: 329 YFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPN 388
Query: 268 VFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCK 324
V T+ ALI GF G+L A +NK +GC N ++ +V +C A++L +
Sbjct: 389 VSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIE 448
Query: 325 RTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
+ ++ C + + L RVE A L
Sbjct: 449 KMSTDNCPPNTVTFNTFIKGLCCSGRVECAINL 481
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 142/306 (46%), Gaps = 9/306 (2%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
V+ + E ++ + F+ ++ F+ Y +++L ++ +L+ K
Sbjct: 49 VVMRLRTETDIVLASNYFRSIANSKAFQHTQLTYQIMIEKLGRECDVDGVQYLLQQMKLE 108
Query: 87 KDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEV 146
E +I Y + + E A K+F + C+ TV +N LL A ++ +F +
Sbjct: 109 GISCSEDLFINVINTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMI 168
Query: 147 DGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLL 206
+ ++ ++ G EP++ +YN ++KA +D A LL EM KG D++++ T++
Sbjct: 169 EPIYSNMKRD-GKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVIS 227
Query: 207 GFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINP 266
G+ +A ++ ++ +PNV YNA ++G E + K+ L+G+M K I+P
Sbjct: 228 SMSKLGKVEEAREL-----SIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDP 282
Query: 267 DVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLC 323
+V T+ +I GN+E A + K GC N F L+ +G + A N+
Sbjct: 283 NVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIW 342
Query: 324 KRTFSE 329
R E
Sbjct: 343 NRMAEE 348
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 122/256 (47%), Gaps = 5/256 (1%)
Query: 56 NTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVF 115
N Y + A A EI I ++ + +++MF A +
Sbjct: 388 NVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLI 447
Query: 116 DEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVD 175
++M NC ++FN + S + + LF + + G P++ +YN ++ +
Sbjct: 448 EKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQM-EQYGCSPNIKTYNEVLDGLLK 506
Query: 176 KGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRS 235
+ + A L+ EME+KG+ L+L+T+NT+ GF + G+F +A K+ M+ V+P+ +
Sbjct: 507 ENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAIT 566
Query: 236 YNARLDGLAIEKQTKKALELVGEMRSK-EINPDVFTFYALIKGFVNEGNLEEAKRWYNK- 293
YN ++ + K A++L+ ++ + + P+V + +L+ G N+ +EEA + +K
Sbjct: 567 YNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQIGVEEAVLYLDKM 626
Query: 294 --SGCGMNKAIFKLLV 307
G +N A + LV
Sbjct: 627 LNEGICLNAATWNALV 642
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 124/287 (43%), Gaps = 13/287 (4%)
Query: 79 ILEHQKQYKDISKEGFTARLIA-------LYGKAAMFENARKVFDEMPGRNCEQTVLSFN 131
+LE + +++EGF ++A L M E A V +M C V ++
Sbjct: 335 VLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGE-AVSVSSKMERNGCSPNVSTYG 393
Query: 132 ALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEK 191
AL+ + ++ + G P++V Y +++ A +L+ +M
Sbjct: 394 ALIDGFAKAGDLVGASEIWNKMMTN-GCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMST 452
Query: 192 KGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKK 251
+ +TFNT + G +GR A ++ M PN+++YN LDGL E + K+
Sbjct: 453 DNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKE 512
Query: 252 ALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVP 308
ALELV EM K + ++ T+ + GF N G EEA + K G + + L
Sbjct: 513 ALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTY 572
Query: 309 FVCEKGDLDFAFNLC-KRTFSERCLVDQAPLQLVVDRLAKELRVEEA 354
C +G + A L K + + + + A ++ + ++ VEEA
Sbjct: 573 AYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQIGVEEA 619
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 98/256 (38%), Gaps = 57/256 (22%)
Query: 40 LVDKFKKSSDL-------GRFRTNTGI-----YTGTVQRLANAKRFR--W--IEEILEHQ 83
L+D F K+ DL + TN I YT V L + F W IE++
Sbjct: 395 LIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDN 454
Query: 84 KQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKF 143
++ F L + E A +F +M C + ++N +L + +
Sbjct: 455 CPPNTVTFNTFIKGLCC----SGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRI 510
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT 203
E L ++ K G+E +LV+YNTI F + G + A LL +M G++ D IT+NT
Sbjct: 511 KEALELVTEMEEK-GMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNT 569
Query: 204 LLLGFYSNGRFADAEKI---------------------W---------------ETMVNM 227
L + G+ A ++ W + M+N
Sbjct: 570 LTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQIGVEEAVLYLDKMLNE 629
Query: 228 NVRPNVRSYNARLDGL 243
+ N ++NA + GL
Sbjct: 630 GICLNAATWNALVRGL 645
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 40/208 (19%), Positives = 79/208 (37%), Gaps = 32/208 (15%)
Query: 150 FKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFY 209
F+ + + + ++Y +I+ + +D LL +M+ +GI F ++ +
Sbjct: 66 FRSIANSKAFQHTQLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYR 125
Query: 210 SNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVF 269
G A K++ + +P V+ YN LD + E + + + M+ P+V+
Sbjct: 126 RVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVY 185
Query: 270 TFYALIKGFVNEGNLEEAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSE 329
T+ L+K C+ +D A L ++
Sbjct: 186 TYNILLKAL--------------------------------CKNNRVDGACKLLVEMSNK 213
Query: 330 RCLVDQAPLQLVVDRLAKELRVEEAKEL 357
C D V+ ++K +VEEA+EL
Sbjct: 214 GCEPDVVSYTTVISSMSKLGKVEEAREL 241
>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
Length = 862
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 107/198 (54%), Gaps = 4/198 (2%)
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL 179
G NC V+++N ++ ++ D +G+ + + K G++ D+V+Y+TII ++
Sbjct: 192 GGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDK-GVKLDVVTYSTIIDGLCKAQAV 250
Query: 180 DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNAR 239
D A +L M KG++ D++T+NT++ G AE + + M++ V+P+V +YN
Sbjct: 251 DRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTI 310
Query: 240 LDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGC 296
+DGL + +A ++ M K++ PD+ T+ LI G+++ G +E R + G
Sbjct: 311 IDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGL 370
Query: 297 GMNKAIFKLLVPFVCEKG 314
+ + LL+ ++C+ G
Sbjct: 371 DPDVVTYSLLLDYLCKNG 388
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 126/254 (49%), Gaps = 22/254 (8%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
KA + A V M + + V++++ ++ ++ D +G+ + + K G++PD+
Sbjct: 211 KAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDK-GVKPDV 269
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
V+YNTII ++D A +L M KG++ D++T+NT++ G A+ + +
Sbjct: 270 VTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQH 329
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M++ +V+P++++YN + G + K+ + + EM ++ ++PDV T+ L+ G
Sbjct: 330 MIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGK 389
Query: 284 LEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDL------------------DFAFNL 322
EA++ + + G N I+ +L+ +G + ++ FN+
Sbjct: 390 CTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNI 449
Query: 323 CKRTFSERCLVDQA 336
++++ ++D+A
Sbjct: 450 VLCAYAKKAMIDEA 463
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 120/238 (50%), Gaps = 4/238 (1%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A+++ D M V+S+N L+G + + DE L D+ +G++PDL+SY+T++
Sbjct: 568 AQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLL-DVMVSVGLKPDLISYDTLL 626
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
+ + G +D+A L EM +KG+ +T++T+L G + RF++A++++ M+ +
Sbjct: 627 RGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQ 686
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
++ +YN L+GL +A ++ + SK++ P++ TF +I G ++A
Sbjct: 687 WDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDL 746
Query: 291 YN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRL 345
+ G N + +++ + ++G LD NL C D L ++ L
Sbjct: 747 FASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSL 804
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 98/190 (51%), Gaps = 1/190 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
++ Y K AM + A +F M V+++ L+ A + D+ F + +
Sbjct: 450 VLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMIND- 508
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ P+ V +N+++ + A L +EM +G+R +++ FNT++ + G+ A
Sbjct: 509 GVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVA 568
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+++ ++M + VRPNV SYN + G + +T +A +L+ M S + PD+ ++ L++G
Sbjct: 569 QRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRG 628
Query: 278 FVNEGNLEEA 287
+ G ++ A
Sbjct: 629 YCKTGRIDNA 638
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 142/293 (48%), Gaps = 20/293 (6%)
Query: 79 ILEHQKQYKDISKEGFTARLIALYG-------KAAMFENARKVFDEMPGRNCEQTVLSFN 131
I E + +S+ G + ++ YG K ++A F++M + FN
Sbjct: 460 IDEAMHIFSRMSQHGLSPDVVT-YGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFN 518
Query: 132 ALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEK 191
+L+ ++++ + LF ++ + G+ P++V +NTI+ ++G + A L+ ME+
Sbjct: 519 SLVYGLCTVDRWEKAEELFFEMWDQ-GVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMER 577
Query: 192 KGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKK 251
G+R ++I++NTL+ G GR +A ++ + MV++ ++P++ SY+ L G +
Sbjct: 578 VGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDN 637
Query: 252 ALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVP 308
A L EM K + P T+ +++G + EAK Y KSG + + +++
Sbjct: 638 AYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILN 697
Query: 309 FVCEKGDLDFAFNLCKRTFSERCLVDQAP----LQLVVDRLAKELRVEEAKEL 357
+C+ +D AF + F C D P +++D L K R ++A +L
Sbjct: 698 GLCKTNCVDEAF----KIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDL 746
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 130/290 (44%), Gaps = 7/290 (2%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I G+ K + R + D G + + Y + L A+ E +L+H
Sbjct: 239 TIIDGLCKAQAVDRAEGVLQHMIDKG-VKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMID 297
Query: 86 YKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
K + + T +I KA + A V M ++ + + ++N L+ +++ ++
Sbjct: 298 -KGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWK 356
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
EV +++ + G++PD+V+Y+ ++ G A + Y M +KGI+ ++ + L
Sbjct: 357 EVVRRLEEM-YARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGIL 415
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
L G+ + G AD + + MV + PN +N L A + +A+ + M +
Sbjct: 416 LHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGL 475
Query: 265 NPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVC 311
+PDV T+ LI G +++A +N+ G N +F LV +C
Sbjct: 476 SPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLC 525
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 89/197 (45%), Gaps = 40/197 (20%)
Query: 130 FNALLGACVNSKKFDE-VDGLFKDLPHKLGIEPDLVSYNTIIKAFV-------------- 174
N LL ++K+ DE +D L + +P + G P++VS NT++K
Sbjct: 128 INQLLNGLCDAKRVDEAMDILLRRMP-EFGCMPNVVSCNTLLKGLCNEKRVEEALELLHT 186
Query: 175 ---DKG---------------------SLDSANTLLYEMEKKGIRLDLITFNTLLLGFYS 210
D G ++D A +L M KG++LD++T++T++ G
Sbjct: 187 MAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCK 246
Query: 211 NGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
AE + + M++ V+P+V +YN +DGL + +A ++ M K + PDV T
Sbjct: 247 AQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVT 306
Query: 271 FYALIKGFVNEGNLEEA 287
+ +I G ++ A
Sbjct: 307 YNTIIDGLCKAQAVDRA 323
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 110/264 (41%), Gaps = 12/264 (4%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVD---GLFKDLPHKLG--IEPD 162
++A K+FDE+ +V +FN LL ++ + LF + + PD
Sbjct: 30 IDDALKLFDELLPHARPASVRAFNHLLNVVARARCSSTSELAVSLFNRMARACSNKVRPD 89
Query: 163 LVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI-W 221
L +Y+ + F G ++ + K G R++ + N LL G R +A I
Sbjct: 90 LCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDILL 149
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK---EINPDVFTFYALIKGF 278
M PNV S N L GL EK+ ++ALEL+ M P+V T+ +I G
Sbjct: 150 RRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGL 209
Query: 279 VNEGNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQ 335
++ A+ + G ++ + ++ +C+ +D A + + + D
Sbjct: 210 CKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDV 269
Query: 336 APLQLVVDRLAKELRVEEAKELVE 359
++D L K V+ A+ +++
Sbjct: 270 VTYNTIIDGLCKAQAVDRAEGVLQ 293
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 86/192 (44%), Gaps = 1/192 (0%)
Query: 102 YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEP 161
Y K +NA +F EM + ++++ +L ++++F E L+ ++ K G +
Sbjct: 629 YCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMI-KSGQQW 687
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
D+ +YN I+ +D A + + K +R ++ITF ++ + GR DA ++
Sbjct: 688 DIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLF 747
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
++ + + PNV +Y + + E + L M PD A+I+ +
Sbjct: 748 ASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGR 807
Query: 282 GNLEEAKRWYNK 293
G + A + +K
Sbjct: 808 GEIMRAGAYLSK 819
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 76/176 (43%), Gaps = 15/176 (8%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEG-----FTARLIALYG--KAAMFENAR 112
Y+ +Q L + +RF E ++ Y ++ K G +T +I L G K + A
Sbjct: 657 YSTILQGLFHTRRFS------EAKELYLNMIKSGQQWDIYTYNII-LNGLCKTNCVDEAF 709
Query: 113 KVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKA 172
K+F + ++ +++F ++ + + LF +P G+ P++V+Y ++K
Sbjct: 710 KIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSH-GLVPNVVTYCIMMKN 768
Query: 173 FVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
+ +G LD + L MEK G D + N ++ G A + MN
Sbjct: 769 IIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRAGAYLSKIDEMN 824
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12775, mitochondrial; Flags: Precursor
gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene [Arabidopsis thaliana]
gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 644
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 161/344 (46%), Gaps = 7/344 (2%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
+I G+ K+ +L + F + G F+ + Y + NA R+ ++L +
Sbjct: 269 IIDGLCKDGSLDNAFNLFNEMEIKG-FKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKR 327
Query: 87 KDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
K IS T + LI + K A ++ EM R +++N+L+ + +E
Sbjct: 328 K-ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEE 386
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
+ DL G +PD++++N +I + +D L EM +G+ + +T+NTL+
Sbjct: 387 AIQMV-DLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLV 445
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEIN 265
GF +G+ A+K+++ MV+ VRP++ SY LDGL + +KALE+ G++ ++
Sbjct: 446 QGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKME 505
Query: 266 PDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
D+ + +I G N +++A + G ++ + +++ +C K L A L
Sbjct: 506 LDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADIL 565
Query: 323 CKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKTNSY 366
++ E D+ +++ + A EL+E K++ +
Sbjct: 566 FRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGF 609
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 104/204 (50%), Gaps = 3/204 (1%)
Query: 159 IEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAE 218
I+ D V Y+ II GSLD+A L EME KG + D+IT+NTL+ GF + GR+ D
Sbjct: 259 IKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGA 318
Query: 219 KIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGF 278
K+ M+ + PNV +++ +D E + ++A +L+ EM + I P+ T+ +LI GF
Sbjct: 319 KLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGF 378
Query: 279 VNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQ 335
E LEEA + + GC + F +L+ C+ +D L + + +
Sbjct: 379 CKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANT 438
Query: 336 APLQLVVDRLAKELRVEEAKELVE 359
+V + ++E AK+L +
Sbjct: 439 VTYNTLVQGFCQSGKLEVAKKLFQ 462
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 122/281 (43%), Gaps = 8/281 (2%)
Query: 97 RLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHK 156
RL + K +E + +M + ++ + + ++ +K + K
Sbjct: 93 RLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKI-MK 151
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
LG EPD V +NT++ + + A L+ M + G + LIT NTL+ G NG+ +D
Sbjct: 152 LGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSD 211
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
A + + MV +PN +Y L+ + QT A+EL+ +M + I D + +I
Sbjct: 212 AVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIID 271
Query: 277 GFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV 333
G +G+L+ A +N+ G + + L+ C G D L + +
Sbjct: 272 GLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISP 331
Query: 334 DQAPLQLVVDRLAKELRVEEA----KELVELGKTNSYCRYN 370
+ +++D KE ++ EA KE+++ G + YN
Sbjct: 332 NVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYN 372
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 99/230 (43%), Gaps = 4/230 (1%)
Query: 128 LSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLY 187
LS+ L + + K D+ LF+D+ + P ++ +N + A + L
Sbjct: 54 LSYRDKLSSGLVGIKADDAVDLFRDMIQSRPL-PTVIDFNRLFSAIAKTKQYELVLALCK 112
Query: 188 EMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEK 247
+ME KGI + T + ++ F + + A ++ + P+ +N L+GL +E
Sbjct: 113 QMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLEC 172
Query: 248 QTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFK 304
+ +ALELV M P + T L+ G G + +A ++ +G N+ +
Sbjct: 173 RVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYG 232
Query: 305 LLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA 354
++ +C+ G A L ++ +D +++D L K+ ++ A
Sbjct: 233 PVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNA 282
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 92/208 (44%), Gaps = 8/208 (3%)
Query: 86 YKDISKEGFTAR------LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
++++S G A L+ + ++ E A+K+F EM R ++S+ LL +
Sbjct: 426 FREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCD 485
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
+ + ++ +F + K +E D+ Y II + +D A L + KG++LD
Sbjct: 486 NGELEKALEIFGKI-EKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDAR 544
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
+N ++ + A+ ++ M P+ +YN + + A EL+ EM
Sbjct: 545 AYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEM 604
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLEEA 287
+S DV T +I ++ G L+++
Sbjct: 605 KSSGFPADVSTVKMVIN-MLSSGELDKS 631
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 101/237 (42%), Gaps = 6/237 (2%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
+I G K N + ++ F++ S G NT Y VQ + + +++ +
Sbjct: 409 LINGYCKANRIDDGLELFREMSLRGVI-ANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSR 467
Query: 87 KDISKEGFTARLIALYGKA--AMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
+ + + I L G E A ++F ++ E + + ++ N+ K D
Sbjct: 468 R--VRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVD 525
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
+ LF LP K G++ D +YN +I K SL A+ L +M ++G D +T+N L
Sbjct: 526 DAWDLFCSLPLK-GVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNIL 584
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS 261
+ + A ++ E M + +V + ++ L+ + K L+++ R+
Sbjct: 585 IRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSGELDKSFLDMLSTTRA 641
>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 157/375 (41%), Gaps = 42/375 (11%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I G L+++V + K L + N Y+ + L + + E++L +
Sbjct: 150 TIIDGYCHVGELQKVV-QLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMK 208
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
LI + K + A K+F EM R ++F+AL+ S K E
Sbjct: 209 RGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVE 268
Query: 146 VDGLFKDLPHK----------------------------------LGIEPDLVSYNTIIK 171
D LF ++ K +G+ P++V+Y +
Sbjct: 269 ADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALAD 328
Query: 172 AFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRP 231
G LD+AN LL+EM +KG++L++ T+NT++ G G A K+ E M + P
Sbjct: 329 GLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHP 388
Query: 232 NVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR-- 289
+ +Y +D + KA EL+ EM + + P V TF L+ G G LE+ +R
Sbjct: 389 DTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLL 448
Query: 290 -WYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKE 348
W + G N A + ++ C + ++ + + + ++ + D +++ K
Sbjct: 449 KWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKA 508
Query: 349 LRVEEA----KELVE 359
++EA KE+VE
Sbjct: 509 RNMKEAWFLHKEMVE 523
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 124/279 (44%), Gaps = 9/279 (3%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L L K M KVF E P S+N L+ + K E L + K
Sbjct: 81 LTCLSSKRDMLGMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFK- 139
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G PD+VSY TII + G L L+ EM+ KG++ +L T+++++L +G+ +
Sbjct: 140 GCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEG 199
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
EK+ M+ V P+ Y +DG T+ A +L EM ++EI PD F ALI G
Sbjct: 200 EKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICG 259
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
G + EA + +N K G ++ + L+ C+ G++ AF L + +
Sbjct: 260 LSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPN 319
Query: 335 QAPLQLVVDRLAKELRVEEAKELVELGKTNSYCRYNLKF 373
+ D L K ++ A EL+ + CR L+
Sbjct: 320 VVTYTALADGLCKSGELDTANELL-----HEMCRKGLQL 353
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 110/236 (46%), Gaps = 5/236 (2%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
KA A K+ +EM +++ L+ A + + + L +++ + G++P +
Sbjct: 367 KAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDR-GLQPTV 425
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
V++N ++ G L+ LL M +KGI + T+N+++ + + +I+
Sbjct: 426 VTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRG 485
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M V P+ +YN + G + K+A L EM K N ++ ALIKGF
Sbjct: 486 MCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKK 545
Query: 284 LEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQA 336
L EA++ + + G + I+ L V E+G+++ LC E+CL+D+A
Sbjct: 546 LLEARQLFEEMRREGLVASAEIYNLFVDMNYEEGNMETTLELCDEAI-EKCLLDKA 600
>gi|356561776|ref|XP_003549154.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 567
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 146/313 (46%), Gaps = 45/313 (14%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEPD 162
K + A +F EM N E V+++N L+ G C + E GLF ++ + GI PD
Sbjct: 200 KRGLVGEALGLFYEMGVVNVEPNVVTYNCLIQGLCGEVGGWREGVGLFNEMVAEKGIVPD 259
Query: 163 LVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWE 222
+ +++ ++ F +G L A +++ M + G+ L+++T+N+L+ G+ R +A ++++
Sbjct: 260 VQTFSILVNGFCKEGLLLRAESMVGFMIRIGVELNVVTYNSLISGYCLRNRMEEAVRVFD 319
Query: 223 TMV--NMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
MV P+V +YN+ + G K+ KA+ L+ EM K ++PDVFT+ +LI GF
Sbjct: 320 LMVREGEGCLPSVVTYNSLIHGWCKVKKVNKAMSLLSEMVGKGLDPDVFTWTSLIGGFFE 379
Query: 281 EGNLEEAK--------------------------------------RWYNKSGCGMNKAI 302
G AK R KSG ++ I
Sbjct: 380 VGKPLAAKELFITMKDQGQVPILQTCAVVLDGLYKCWLDSEAMTLFRAMEKSGLDLDIVI 439
Query: 303 FKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGK 362
+ +++ +C+ G L+ A L + +D +++ L +E +++A+EL+ K
Sbjct: 440 YNIMLDGMCKMGKLNDARKLLSFVLVKGLKIDSYTWNIMIKGLCREGLLDDAEELLRKMK 499
Query: 363 TNSY----CRYNL 371
N C YN+
Sbjct: 500 ENGCPPNKCSYNV 512
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/273 (20%), Positives = 129/273 (47%), Gaps = 4/273 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHK 156
L+ + K + A + M E V+++N+L+ G C+ ++ + V +
Sbjct: 266 LVNGFCKEGLLLRAESMVGFMIRIGVELNVVTYNSLISGYCLRNRMEEAVRVFDLMVREG 325
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
G P +V+YN++I + ++ A +LL EM KG+ D+ T+ +L+ GF+ G+
Sbjct: 326 EGCLPSVVTYNSLIHGWCKVKKVNKAMSLLSEMVGKGLDPDVFTWTSLIGGFFEVGKPLA 385
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
A++++ TM + P +++ LDGL +A+ L M ++ D+ + ++
Sbjct: 386 AKELFITMKDQGQVPILQTCAVVLDGLYKCWLDSEAMTLFRAMEKSGLDLDIVIYNIMLD 445
Query: 277 GFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV 333
G G L +A++ + G ++ + +++ +C +G LD A L ++ C
Sbjct: 446 GMCKMGKLNDARKLLSFVLVKGLKIDSYTWNIMIKGLCREGLLDDAEELLRKMKENGCPP 505
Query: 334 DQAPLQLVVDRLAKELRVEEAKELVELGKTNSY 366
++ + V L ++ + +++ +++ K +
Sbjct: 506 NKCSYNVFVQGLLRKYDISRSRKYLQIMKDKGF 538
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 90/214 (42%), Gaps = 13/214 (6%)
Query: 115 FDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIE-PDLVSYNTIIKAF 173
F M N + FN L G S+ F L K L H LG E D+ + N +I
Sbjct: 64 FHRMLTLNPFPCIQDFNLLFGIVAKSQHFATAISLIKTL-HSLGYEIADVCTLNILINCL 122
Query: 174 VDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF-YSNG--RFADAEKIWET---MVNM 227
+L M K G+ L+T NT+ G NG + D E+ MV
Sbjct: 123 CRLRKTTLGFAVLGLMTKIGLEPTLVTLNTIANGLCIVNGLCKIGDTSGALESLKKMVKR 182
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE-GNLEE 286
N+ PNV YNA LDGL +AL L EM + P+V T+ LI+G E G E
Sbjct: 183 NLEPNVVVYNAILDGLCKRGLVGEALGLFYEMGVVNVEPNVVTYNCLIQGLCGEVGGWRE 242
Query: 287 AKRWYN----KSGCGMNKAIFKLLVPFVCEKGDL 316
+N + G + F +LV C++G L
Sbjct: 243 GVGLFNEMVAEKGIVPDVQTFSILVNGFCKEGLL 276
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 87/176 (49%), Gaps = 7/176 (3%)
Query: 124 EQTVLSFNALL-GACVNSK--KFDEVDGLFKDLPH--KLGIEPDLVSYNTIIKAFVDKGS 178
E T+++ N + G C+ + K + G + L K +EP++V YN I+ +G
Sbjct: 144 EPTLVTLNTIANGLCIVNGLCKIGDTSGALESLKKMVKRNLEPNVVVYNAILDGLCKRGL 203
Query: 179 LDSANTLLYEMEKKGIRLDLITFNTLLLGFYSN-GRFADAEKIWETMV-NMNVRPNVRSY 236
+ A L YEM + +++T+N L+ G G + + ++ MV + P+V+++
Sbjct: 204 VGEALGLFYEMGVVNVEPNVVTYNCLIQGLCGEVGGWREGVGLFNEMVAEKGIVPDVQTF 263
Query: 237 NARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN 292
+ ++G E +A +VG M + +V T+ +LI G+ +EEA R ++
Sbjct: 264 SILVNGFCKEGLLLRAESMVGFMIRIGVELNVVTYNSLISGYCLRNRMEEAVRVFD 319
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 1/133 (0%)
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT 203
E LF+ + K G++ D+V YN ++ G L+ A LL + KG+++D T+N
Sbjct: 419 SEAMTLFRAM-EKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSFVLVKGLKIDSYTWNI 477
Query: 204 LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
++ G G DAE++ M PN SYN + GL + ++ + + M+ K
Sbjct: 478 MIKGLCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQGLLRKYDISRSRKYLQIMKDKG 537
Query: 264 INPDVFTFYALIK 276
D T LI+
Sbjct: 538 FPVDATTAELLIR 550
>gi|224136626|ref|XP_002322376.1| predicted protein [Populus trichocarpa]
gi|222869372|gb|EEF06503.1| predicted protein [Populus trichocarpa]
Length = 715
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 134/320 (41%), Gaps = 20/320 (6%)
Query: 39 RLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARL 98
RL K +S D ++ N YT + + E +L K+ + L
Sbjct: 357 RLFLKLVRSDD---YKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPNTKTYTCL 413
Query: 99 IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLG 158
I + KA FE A ++ D M + ++NA + + +F E L K +LG
Sbjct: 414 IDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKLLKK-GFRLG 472
Query: 159 IEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAE 218
++ D V+Y +I + A +M K G++ D+ T+NTL+ F R ++E
Sbjct: 473 LQADTVTYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAAFSRQRRMEESE 532
Query: 219 KIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGF 278
K++ V + + P +Y + + G ++ AL+ M PD T+ ALI G
Sbjct: 533 KLFAEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFFNRMSDHGCTPDSLTYGALISGL 592
Query: 279 VNEGNLEEAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPL 338
E L+EA + Y + K L P CE L A+ CK+ D A
Sbjct: 593 CKESKLDEACQLY-------EAMVDKGLSP--CEVTRLTLAYEYCKQD-------DSATA 636
Query: 339 QLVVDRLAKELRVEEAKELV 358
++++RL K+L + L+
Sbjct: 637 MVILERLDKKLWIRTVNTLI 656
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 120/267 (44%), Gaps = 5/267 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
++ ++ + F+ A + EM TV + N + G + +F ++ +
Sbjct: 167 MVRVFAEIGKFQEAVNMVIEMENHGLVLTVRTLNCVTGVAGEMGLVGYAENVFDEMRVR- 225
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ PD VSY + A+ G + + L +M ++G +D T ++ F G +
Sbjct: 226 GVCPDSVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMISTFCEKGFASRV 285
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ V + ++PN+ ++ + ++GL K+A E++ EM K P+V+T ALI G
Sbjct: 286 FWYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDG 345
Query: 278 FVNEGNLEEAKRWYNK----SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV 333
+G E+A R + K N + ++ C++ L+ A L R + +
Sbjct: 346 LCKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVP 405
Query: 334 DQAPLQLVVDRLAKELRVEEAKELVEL 360
+ ++D +K E+A EL++L
Sbjct: 406 NTKTYTCLIDGHSKAGNFEKAYELMDL 432
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/304 (20%), Positives = 126/304 (41%), Gaps = 39/304 (12%)
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
FT+ + L + ++ + A ++ +EM + + V + AL+ ++ LF L
Sbjct: 304 FTSLINGLCKRGSI-KQAFEMLEEMVKKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKL 362
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
+P++ +Y ++I + + L+ A LL M+++G+ + T+ L+ G G
Sbjct: 363 VRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPNTKTYTCLIDGHSKAGN 422
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ------------------------- 248
F A ++ + M N+ +YNA +D L + +
Sbjct: 423 FEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKLLKKGFRLGLQADTVTYTI 482
Query: 249 ----------TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS-GCG 297
T++AL +M + PD+ T+ LI F + +EE+++ + ++ G G
Sbjct: 483 LISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAAFSRQRRMEESEKLFAEAVGLG 542
Query: 298 M--NKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAK 355
+ K + ++ C ++ A R C D ++ L KE +++EA
Sbjct: 543 LVPTKETYTSMICGYCRDRNVSLALKFFNRMSDHGCTPDSLTYGALISGLCKESKLDEAC 602
Query: 356 ELVE 359
+L E
Sbjct: 603 QLYE 606
>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 602
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 130/285 (45%), Gaps = 7/285 (2%)
Query: 78 EILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGAC 137
E+LE D+ R + GK + A +V D R C V+++ L+ A
Sbjct: 197 EVLERMSVAPDVVTYNTILRSLCDSGK---LKEAMEVLDRQLQRECYPDVITYTILIEAT 253
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLD 197
N + L ++ K G +PD+V+YN +I +G LD A L M G + +
Sbjct: 254 CNDSGVGQAMKLLDEM-RKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPN 312
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
+IT N +L S GR+ DAE++ M+ P+V ++N ++ L ++ +A++++
Sbjct: 313 VITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLE 372
Query: 258 EMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKG 314
+M P+ ++ L+ GF E ++ A + GC + + L+ +C+ G
Sbjct: 373 KMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDG 432
Query: 315 DLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+D A + + S+ C V+D L K + E A EL+E
Sbjct: 433 KVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLE 477
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 91/173 (52%), Gaps = 1/173 (0%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
+ A + + M R C ++++N LL A K D + L K G P L++YN
Sbjct: 399 MDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSK-GCSPVLITYN 457
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
T+I G + A LL EM +KG++ D+IT++TLL G G+ +A KI+ M +
Sbjct: 458 TVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGL 517
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
+++P+ +YNA + GL +QT +A++ + M K P T+ LI+G +
Sbjct: 518 SIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEGIAD 570
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 97/183 (53%), Gaps = 1/183 (0%)
Query: 110 NARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTI 169
+A ++ +M + C +V++FN L+ + + + +P K G P+ +SYN +
Sbjct: 331 DAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMP-KHGCVPNSLSYNPL 389
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
+ F + +D A L M +G D++T+NTLL +G+ A +I + +
Sbjct: 390 LHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGC 449
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
P + +YN +DGL +T+ A+EL+ EMR K + PD+ T+ L++G EG ++EA +
Sbjct: 450 SPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIK 509
Query: 290 WYN 292
++
Sbjct: 510 IFH 512
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 133/284 (46%), Gaps = 7/284 (2%)
Query: 80 LEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
LE DI LI + ++ + A ++ + + V+++N L+G
Sbjct: 129 LERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVITYNVLIGGYCK 188
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
S + D+ ++ ++ + PD+V+YNTI+++ D G L A +L ++ D+I
Sbjct: 189 SGEIDKA----LEVLERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVI 244
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
T+ L+ ++ A K+ + M +P+V +YN ++G+ E + +A++ + M
Sbjct: 245 TYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNM 304
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDL 316
S P+V T +++ + G +A+R + + GC + F +L+ F+C K L
Sbjct: 305 PSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLL 364
Query: 317 DFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVEL 360
A ++ ++ C+ + ++ +E +++ A E +E+
Sbjct: 365 GRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEI 408
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 86/191 (45%), Gaps = 6/191 (3%)
Query: 167 NTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVN 226
N ++ V G L+ L M +G D+I +L+ GF +G+ A +I E + N
Sbjct: 110 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILEN 169
Query: 227 MNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEE 286
P+V +YN + G + KALE++ M + PDV T+ +++ + G L+E
Sbjct: 170 SGAVPDVITYNVLIGGYCKSGEIDKALEVLERM---SVAPDVVTYNTILRSLCDSGKLKE 226
Query: 287 AKRWYNKS---GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVD 343
A ++ C + + +L+ C + A L + C D ++++
Sbjct: 227 AMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLIN 286
Query: 344 RLAKELRVEEA 354
+ KE R++EA
Sbjct: 287 GICKEGRLDEA 297
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 99/211 (46%), Gaps = 8/211 (3%)
Query: 37 LKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRF-RWIE--EILEHQKQYKDISKEG 93
L R +D +K G N+ Y + K+ R IE EI+ + Y DI
Sbjct: 364 LGRAIDVLEKMPKHGCV-PNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVT-- 420
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
+ L AL K + A ++ +++ + C ++++N ++ K + L +++
Sbjct: 421 YNTLLTALC-KDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEM 479
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
K G++PD+++Y+T+++ +G +D A + ++ME I+ +T+N ++LG +
Sbjct: 480 RRK-GLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQ 538
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLA 244
+ A MV +P +Y ++G+A
Sbjct: 539 TSRAIDFLAYMVEKGCKPTEATYTILIEGIA 569
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 66/158 (41%)
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS 261
N L NG + K E M+ P+V + + + G +TKKA ++ + +
Sbjct: 110 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILEN 169
Query: 262 KEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFN 321
PDV T+ LI G+ G +++A + + + ++ +C+ G L A
Sbjct: 170 SGAVPDVITYNVLIGGYCKSGEIDKALEVLERMSVAPDVVTYNTILRSLCDSGKLKEAME 229
Query: 322 LCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ R C D ++++ + V +A +L++
Sbjct: 230 VLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLD 267
>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 677
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 144/302 (47%), Gaps = 14/302 (4%)
Query: 81 EHQKQYKDISKEGFTARLIA---LYG---KAAMFENARKVFDEMPGRNCEQTVLSFNALL 134
E +K + ++GF + A L G K + A +V++E+ E V + N ++
Sbjct: 133 EGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEIARSGIELNVYTLNIMV 192
Query: 135 GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGI 194
A K D+V D+ K GI D+V+YNT+I A+ +G L A ++ M KG+
Sbjct: 193 NALCKDHKIDDVKPFLIDMEQK-GIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGL 251
Query: 195 RLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALE 254
+ L T+N ++ G GR+ A+ ++ M+++ + P+ +YN L +A +
Sbjct: 252 KPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKD 311
Query: 255 LVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVC 311
+ +M + ++PD+ +F +LI G+L++A ++ SG + I+ +L+ C
Sbjct: 312 IFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYC 371
Query: 312 EKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAK----ELVELGKTNSYC 367
G + A + + + C +D +++ L K+ + +A E+VE G +C
Sbjct: 372 RNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFC 431
Query: 368 RY 369
+
Sbjct: 432 TF 433
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 111/259 (42%), Gaps = 37/259 (14%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL------PHKL---- 157
F A+ +F +M R ++SF++L+G + D+ F+D+ P +
Sbjct: 306 FLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTI 365
Query: 158 ------------------------GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKG 193
G D+V+YNTI+ K L AN L EM ++G
Sbjct: 366 LINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERG 425
Query: 194 IRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKAL 253
+ D TF TL+ G G A ++ M N++P++ +YN +DG + +KA
Sbjct: 426 VVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKAN 485
Query: 254 ELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFV 310
EL EM S++I P+ ++ L+ G+ N G + EA R ++ + G ++
Sbjct: 486 ELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGY 545
Query: 311 CEKGDLDFAFNLCKRTFSE 329
C GDL A + SE
Sbjct: 546 CRSGDLSKADEFLGKMISE 564
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 105/196 (53%), Gaps = 1/196 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K E A ++++EM R +S+ L+ N E L+ ++ K
Sbjct: 471 LIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRK- 529
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
GI+P LV+ NT+IK + G L A+ L +M +G+ D IT+NTL+ GF A
Sbjct: 530 GIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKA 589
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ M ++P+V +YN L+G + + ++A ++ +M + I+PD T+ LI G
Sbjct: 590 FFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLING 649
Query: 278 FVNEGNLEEAKRWYNK 293
+V++ NL+EA R++++
Sbjct: 650 YVSQDNLKEAFRFHDE 665
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 85/172 (49%), Gaps = 1/172 (0%)
Query: 96 ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPH 155
A L+ Y A +++DEM + + T+++ N ++ S + D +
Sbjct: 504 AILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMIS 563
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
+ G+ PD ++YNT+I FV +D A L+ +ME KG++ D++T+N +L GF GR
Sbjct: 564 E-GVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQ 622
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPD 267
+AE I M+ + P+ +Y ++G + K+A EM + PD
Sbjct: 623 EAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVPD 674
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 70/156 (44%), Gaps = 3/156 (1%)
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
D + ++ +I+++V L+ + +KG + + N+LL G G A +++
Sbjct: 114 DNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVY 173
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
+ + NV + N ++ L + + + +M K I D+ T+ LI + E
Sbjct: 174 NEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCRE 233
Query: 282 GNLEEAKRWYNK-SGCGMNKAIFKL--LVPFVCEKG 314
G L EA N SG G+ +F ++ +C+KG
Sbjct: 234 GLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKG 269
>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 594
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 129/264 (48%), Gaps = 6/264 (2%)
Query: 101 LYG--KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLG 158
+YG + ++ A +F EM N + V++F+ L+ A E +F + ++
Sbjct: 286 IYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMI-QIA 344
Query: 159 IEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAE 218
+EPD+V+Y+++I ++TLL EM + IR D++TF+ + F G ++A+
Sbjct: 345 MEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQ 404
Query: 219 KIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGF 278
I M+ +RPNV +YN+ +DG + Q +A ++ M +K PDV ++ LIKG+
Sbjct: 405 SIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGY 464
Query: 279 VNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQ 335
++EAK+ +++ G N L+ +C+ G A L K+ S C D
Sbjct: 465 CKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDL 524
Query: 336 APLQLVVDRLAKELRVEEAKELVE 359
++ K ++EA L E
Sbjct: 525 ITYSTLLSGFCKHGHLDEALALFE 548
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 159/338 (47%), Gaps = 13/338 (3%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFR----WIEEILEH 82
+I + K + VD F +G Y + + N+ +++ +E+LE
Sbjct: 250 IIDSLCKNRLVNEAVDLFYHMRSIG-ISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEW 308
Query: 83 QKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKK 142
+ ++ F+ + AL + + E A VF +M E ++++++L+ S
Sbjct: 309 NMKPDVVT---FSILVDALCKEGVVLE-ALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSL 364
Query: 143 FDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFN 202
+ E L ++ + I PD+V+++ + F KG + A +++ M ++G+R +++T+N
Sbjct: 365 WKESSTLLNEMLSR-NIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYN 423
Query: 203 TLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
+L+ G+ + + +A K+++ MVN P+V SYN + G ++ +A +L EM K
Sbjct: 424 SLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHK 483
Query: 263 EINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFA 319
+ P+ T LI G G AK + K GC + + L+ C+ G LD A
Sbjct: 484 GLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEA 543
Query: 320 FNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
L + + + ++++ + K ++E+AKEL
Sbjct: 544 LALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKEL 581
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 85/167 (50%), Gaps = 1/167 (0%)
Query: 102 YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEP 161
Y + + ARKVFD M + C VLS+N L+ S++ DE LF ++ HK G+ P
Sbjct: 429 YCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHK-GLTP 487
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
+ +++ T+I G +A L +M G DLIT++TLL GF +G +A ++
Sbjct: 488 NSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALF 547
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDV 268
E + ++PN L G+ + + A EL + +E+ PDV
Sbjct: 548 EALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSIEELQPDV 594
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 99/195 (50%), Gaps = 3/195 (1%)
Query: 99 IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKL 157
+ ++ K M A+ + + M R V+++N+L+ G C++S+ DE +F + +K
Sbjct: 391 VDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQ-MDEARKVFDIMVNK- 448
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G PD++SYN +IK + +D A L EM KG+ + IT TL+ G GR A
Sbjct: 449 GCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAA 508
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+++++ M + P++ +Y+ L G +AL L ++ ++ P+ L+ G
Sbjct: 509 KELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGG 568
Query: 278 FVNEGNLEEAKRWYN 292
G LE+AK ++
Sbjct: 569 MCKAGKLEDAKELFS 583
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 114/272 (41%), Gaps = 47/272 (17%)
Query: 85 QYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
++KD S + F R G + F++A F++M N + FN LL A V K +D
Sbjct: 62 RHKDASFDNFAVRDKCKGGSFSNFDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYD 121
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
V +++ + G+ + + +I + ++L ++ K G + +ITFNTL
Sbjct: 122 SVVSIYRKMEF-FGVSCSVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTL 180
Query: 205 LLGFYSNGRFADAEK----------------------------------IW-ETMVNMNV 229
+ G GR +A + +W + MV ++
Sbjct: 181 INGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDC 240
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK- 288
P V SY+ +D L + +A++L MRS I+P V T+ +LI G N G ++A
Sbjct: 241 EPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASI 300
Query: 289 ------RWYNKSGCGMNKAIFKLLVPFVCEKG 314
W K + F +LV +C++G
Sbjct: 301 LFKEMLEWNMKP----DVVTFSILVDALCKEG 328
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 84/162 (51%), Gaps = 3/162 (1%)
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
+L EP++VSY+ II + ++ A L Y M GI ++T+N+L+ G ++G++
Sbjct: 237 ELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWK 296
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
A +++ M+ N++P+V +++ +D L E +AL + G+M + PD+ T+ +LI
Sbjct: 297 QASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLI 356
Query: 276 KGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKG 314
G +E+ N+ + F + V C+KG
Sbjct: 357 HGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKG 398
>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
Length = 636
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 145/321 (45%), Gaps = 45/321 (14%)
Query: 78 EILEHQKQYKDISKEGFTA------RLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFN 131
++L + ++ + K G T LI YGK + + + +F+EM CE V+++N
Sbjct: 147 DMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYN 206
Query: 132 ALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKA-------------FVD--- 175
AL+ + K F+++ K ++P+++SY+T+I A FVD
Sbjct: 207 ALINSFCKFKGMLRAFEFFREMKDK-DLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTR 265
Query: 176 -------------------KGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
G+L A L EM ++ + L+++T+ TLL G G +
Sbjct: 266 VGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNE 325
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
AE+++ M V PN+++Y A + G + KA+EL EMR K+I PD+ + ++
Sbjct: 326 AEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVW 385
Query: 277 GFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV 333
G +E LEE K +SG G N I+ L+ + G+ A NL + V
Sbjct: 386 GLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEV 445
Query: 334 DQAPLQLVVDRLAKELRVEEA 354
++D L K V+EA
Sbjct: 446 TVVTFCALIDGLCKRGLVQEA 466
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 136/291 (46%), Gaps = 9/291 (3%)
Query: 75 WI---EEILEHQKQYKDISKEGFTA--RLIALYGKAAMFENARKVFDEMPGRNCEQTVLS 129
W+ ++ E +++ GF L ++ + M E A + F M S
Sbjct: 40 WVLPGSDVFEILWTTRNVCVPGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARS 99
Query: 130 FNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEM 189
NA L + + D F+D+ GI P + +YN +I +G + +A +L +M
Sbjct: 100 CNAFLHRLSKAGEGDLSRDFFRDMVGA-GIAPTVFTYNIMIGHVCKEGDMLTARSLFEQM 158
Query: 190 EKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQT 249
+K G+ D++T+NTL+ G+ G ++ ++E M M P+V +YNA ++ K
Sbjct: 159 KKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGM 218
Query: 250 KKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNKAIFKLL 306
+A E EM+ K++ P+V ++ LI EG ++ A +++ + G N+ + L
Sbjct: 219 LRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSL 278
Query: 307 VPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
+ C+ G+L AF L E ++ ++D L +E + EA+EL
Sbjct: 279 IDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEEL 329
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 105/219 (47%), Gaps = 7/219 (3%)
Query: 81 EHQKQYKDISKEGFTARLIA----LYG--KAAMFENARKVFDEMPGRNCEQTVLSFNALL 134
E ++ ++ + K G T L A ++G K + A ++F+EM ++ + +L + ++
Sbjct: 325 EAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIV 384
Query: 135 GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGI 194
+ K +E + ++ GI + V Y T++ A+ G+ A LL EM G
Sbjct: 385 WGLCSESKLEECKIIMTEMKES-GIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGT 443
Query: 195 RLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALE 254
+ ++TF L+ G G +A + M + +++PNV Y A +DGL A +
Sbjct: 444 EVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKK 503
Query: 255 LVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK 293
L EM+ K + PD + A+I G + GN +EA NK
Sbjct: 504 LFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNK 542
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 88/197 (44%), Gaps = 3/197 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLP-HK 156
L+ Y KA A + +EM E TV++F AL+ E F +P H
Sbjct: 418 LMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHD 477
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
L +P++ Y +I + A L EM+ K + D I + ++ G +G F +
Sbjct: 478 L--QPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQE 535
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
A + M+ M + ++ +Y + + GL+ Q ++A + + EM K I PD L++
Sbjct: 536 ALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLLR 595
Query: 277 GFVNEGNLEEAKRWYNK 293
GN++EA N+
Sbjct: 596 KHYELGNIDEAIELQNE 612
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/244 (20%), Positives = 95/244 (38%), Gaps = 13/244 (5%)
Query: 6 RLLSCSFSTTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGR---FRTNTGIYTG 62
+++ + P +++ +K N ++ ++ DLG T + G
Sbjct: 397 KIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDG 456
Query: 63 TVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRN 122
+R + + + +H Q LI K +A+K+FDEM +N
Sbjct: 457 LCKRGLVQEAIYYFGRMPDHDLQ----PNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKN 512
Query: 123 CEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSA 182
+++ A++ + F E + ++ ++GIE DL +Y +++ G + A
Sbjct: 513 MIPDKIAYTAMIDGNLKHGNFQEALNM-RNKMMEMGIELDLYAYTSLVWGLSQCGQVQQA 571
Query: 183 NTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA-----EKIWETMVNMNVRPNVRSYN 237
L EM KGI D LL Y G +A E + + +++ N P V +
Sbjct: 572 RKFLAEMIGKGIIPDETLCTRLLRKHYELGNIDEAIELQNELVEKGLIHGNSNPAVPNIQ 631
Query: 238 ARLD 241
R D
Sbjct: 632 TRDD 635
>gi|125600921|gb|EAZ40497.1| hypothetical protein OsJ_24952 [Oryza sativa Japonica Group]
Length = 766
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 130/263 (49%), Gaps = 4/263 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI+ + A+++ A +VFDEM E ++FN+LL +++ DE + +++ ++
Sbjct: 231 LISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEM-ERV 289
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G P +V+YN++I ++V G L+ A L EME KG++ D++T+ TL+ G G+ A
Sbjct: 290 GCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAA 349
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ MV +PN+ +YNA + + + + + + E RS PD+ T+ L+
Sbjct: 350 IVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAV 409
Query: 278 FVNEGNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
F G E + K+G + + L+ G D A + KR D
Sbjct: 410 FGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPD 469
Query: 335 QAPLQLVVDRLAKELRVEEAKEL 357
+ V+ LA+ R E+A++L
Sbjct: 470 VSTYNAVLSALARGGRWEQAEKL 492
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 98/191 (51%), Gaps = 1/191 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI+ +A + A +DEM C+ + ++NAL+ KF E+ +F +
Sbjct: 336 LISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEF-RSA 394
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G PD+V++NT++ F G + + EM+K G + T+ +L+ + G F A
Sbjct: 395 GFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLA 454
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+I++ M+ + P+V +YNA L LA + ++A +L EM ++ PD +++ +L+
Sbjct: 455 MQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHA 514
Query: 278 FVNEGNLEEAK 288
+ N L++ K
Sbjct: 515 YANAKRLDKMK 525
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 105/221 (47%), Gaps = 10/221 (4%)
Query: 93 GFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSK---KFDEVDGL 149
+TA L++ + +A F +A VF M + ++++N +L V SK + EV L
Sbjct: 156 AYTA-LVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLH--VYSKMAVPWKEVVEL 212
Query: 150 FKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFY 209
+ G+ PD +YNT+I + A + EM+ G D +TFN+LL +
Sbjct: 213 VASMKEH-GVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYG 271
Query: 210 SNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVF 269
R +A ++ + M + P+V +YN+ + + ++A+ L EM K + PDV
Sbjct: 272 KARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVV 331
Query: 270 TFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLV 307
T+ LI G G ++ A Y+ ++GC N + L+
Sbjct: 332 TYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALI 372
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 76/145 (52%), Gaps = 1/145 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
++++YGK M K+ M + ++N+L+ ++ + + ++
Sbjct: 581 MVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSS- 639
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ PD SYNT+I A+ KG + A+ L EM+ G++ D++T+N + + SN F +A
Sbjct: 640 GVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEA 699
Query: 218 EKIWETMVNMNVRPNVRSYNARLDG 242
++ MV +PN R+YN+ ++G
Sbjct: 700 IELVRYMVTQGCKPNERTYNSIVEG 724
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 128/280 (45%), Gaps = 15/280 (5%)
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
Y D+S + A L AL + +E A K+F EM R+C+ S+++LL A N+K+ D+
Sbjct: 467 YPDVST--YNAVLSAL-ARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDK 523
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGS----LDSANTLLYEMEKKGIRLDLITF 201
+ L D+ + IEP +N ++K V S L A E+ +K LD+
Sbjct: 524 MKALSDDI-YSERIEP----HNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVL 578
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS 261
N ++ + N EKI M + + +YN+ + + +K ++ E++S
Sbjct: 579 NAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKS 638
Query: 262 KEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDF 318
+ PD +++ +I + +G ++EA R +++ SG + + + V +
Sbjct: 639 SGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEE 698
Query: 319 AFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
A L + ++ C ++ +V+ + ++ +AK V
Sbjct: 699 AIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAKIFV 738
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 105/229 (45%), Gaps = 1/229 (0%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMP 119
Y+ + ANAKR ++ + + + L+ + K A K F E+
Sbjct: 508 YSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELR 567
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL 179
+ C + NA++ ++ +V+ + L + I +YN+++ + G
Sbjct: 568 QKRCSLDINVLNAMVSIYGKNRMVRKVEKIL-SLMKESAINLSAATYNSLMHMYSRLGDC 626
Query: 180 DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNAR 239
+ +L E++ G+R D ++NT++ + G+ +A +++ M ++P+V +YN
Sbjct: 627 EKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIF 686
Query: 240 LDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
+ ++A+ELV M ++ P+ T+ ++++G+ G L +AK
Sbjct: 687 VKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAK 735
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 8/144 (5%)
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
T I+ G L A+ LL D + L+ F GRF DA ++ MV+
Sbjct: 128 TAIRVMARAGRLAEASALL----DAAPGPDAGAYTALVSAFSRAGRFRDAVAVFRRMVDS 183
Query: 228 NVRPNVRSYNARLDGLA-IEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEE 286
V+P + +YN L + + K+ +ELV M+ + PD +T+ LI +E
Sbjct: 184 GVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKE 243
Query: 287 AKRWYNK---SGCGMNKAIFKLLV 307
A + +++ SG +K F L+
Sbjct: 244 AAQVFDEMKASGFEPDKVTFNSLL 267
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/200 (20%), Positives = 78/200 (39%), Gaps = 41/200 (20%)
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSN--------- 211
PD +Y ++ AF G A + M G++ ++T+N ++L YS
Sbjct: 152 PDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYN-VVLHVYSKMAVPWKEVV 210
Query: 212 ----------------------------GRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
+ +A ++++ M P+ ++N+ LD
Sbjct: 211 ELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVY 270
Query: 244 AIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA---KRWYNKSGCGMNK 300
++ +A+E++ EM P V T+ +LI +V +G LE+A K+ G +
Sbjct: 271 GKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDV 330
Query: 301 AIFKLLVPFVCEKGDLDFAF 320
+ L+ + G +D A
Sbjct: 331 VTYTTLISGLDRAGKIDAAI 350
>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 761
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 147/310 (47%), Gaps = 15/310 (4%)
Query: 25 GSVIRGIYKENNLKRLVDKFKKS-SDLGRF----RTNTGIYTGTVQRLANAKRFRWIEEI 79
++++G+ + N+K ++ K SD + + N Y+ + L R E+
Sbjct: 446 ATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEAREL 505
Query: 80 LEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
+ K I LI + ++ +++A+ +F+EM + V +F+ L+
Sbjct: 506 FKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCK 565
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
K E + L + + + G P+ V+Y T++K + A L +M+K G D++
Sbjct: 566 EGKVIEANELLEVMIQR-GCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVV 624
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVN------MNVRPNVRSYNARLDGLAIEKQTKKAL 253
T+ TL+ G G A ++ + M++ N +P+V SY+ +DGL + +A
Sbjct: 625 TYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEAR 684
Query: 254 ELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFV 310
EL EM++ + P+V ++ +LI GF G LE+AK +N+ G +N + +++
Sbjct: 685 ELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGF 744
Query: 311 CEKGDLDFAF 320
C++G +D A
Sbjct: 745 CKEGQIDKAL 754
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 127/264 (48%), Gaps = 14/264 (5%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL-----PHKLGIEPD 162
A ++F +M C V++ L+ S L K++ P+ + +P+
Sbjct: 423 ISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPN 482
Query: 163 LVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWE 222
+SY+ II G D A L EM+ G+ D+I++ +L+ GF +G++ DA+ ++
Sbjct: 483 AISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFN 542
Query: 223 TMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEG 282
MV++ V+P+V +++ +D L E + +A EL+ M + P+ T+ L+KG
Sbjct: 543 EMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMND 602
Query: 283 NLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV------ 333
+ EA + + K GC + + L+ +C+ G++ A L K+ S+
Sbjct: 603 RISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKP 662
Query: 334 DQAPLQLVVDRLAKELRVEEAKEL 357
D +++D L K R +EA+EL
Sbjct: 663 DVISYSIIIDGLCKHGREDEAREL 686
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 141/326 (43%), Gaps = 54/326 (16%)
Query: 82 HQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSK 141
H D++ G LI ++ K A ++ + M R C +++++ L+
Sbjct: 3 HVGIQPDVTTSGV---LIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKH 59
Query: 142 KFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL---------------------- 179
+ E LF + KLG PD ++Y T++K G +
Sbjct: 60 RISEATQLFMSMK-KLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCK 118
Query: 180 -------------------DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
D A L EM+ +G+ D+I++ +L+ GF +G++ A+ +
Sbjct: 119 PTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCL 178
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
+ M+++ +R +V + + +D L E + +A EL+ M + D+ T+ LIKG
Sbjct: 179 FNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCM 238
Query: 281 EGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSE------RC 331
+ + EA R + K GC + + L+ +C+ G+++ A L + ++ +C
Sbjct: 239 KHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKC 298
Query: 332 LVDQAPLQLVVDRLAKELRVEEAKEL 357
+++D L K+ R +EA+EL
Sbjct: 299 KPTLISYSIIIDGLCKDRREDEAREL 324
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 138/338 (40%), Gaps = 85/338 (25%)
Query: 99 IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLG 158
IAL+ M + + G C+ T++S++ ++ ++ DE LFK++ + G
Sbjct: 98 IALHLHQEMLNDTSQY-----GIKCKPTLVSYSIIIDGLCKDRREDEARELFKEMKAQ-G 151
Query: 159 IEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIR----------------------- 195
+ PD++SY ++I F G + A L EM GIR
Sbjct: 152 MMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEAN 211
Query: 196 ------------LDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPN----------- 232
LD++T++TL+ G R ++A +++ +M + RP+
Sbjct: 212 ELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGL 271
Query: 233 ------------------------------VRSYNARLDGLAIEKQTKKALELVGEMRSK 262
+ SY+ +DGL +++ +A EL EM+++
Sbjct: 272 CQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQ 331
Query: 263 EINPDVFTFYALIKGFVNEGNLEEAKRWYNKS---GCGMNKAIFKLLVPFVCEKGDLDFA 319
I PDV ++ LI GF G E+AK +N+ G + +L+ +C+KG + A
Sbjct: 332 GIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEA 391
Query: 320 FNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
L + C+ D +V L + R+ +A +L
Sbjct: 392 NKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQL 429
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 123/285 (43%), Gaps = 45/285 (15%)
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL 179
G C+ T++S++ ++ ++ DE LFK++ + GI PD++SY T+I F G
Sbjct: 295 GIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQ-GIMPDVISYTTLIHGFCLSGKW 353
Query: 180 DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNAR 239
+ A L EM GI+ D+ T + L+ G+ +A K+ E ++ P+V +
Sbjct: 354 EKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTL 413
Query: 240 LDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS----- 294
+ GL ++ + KA +L +M+ P+V T L+KG GN++ A +
Sbjct: 414 VKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTS 473
Query: 295 ----GCGMNKAIFKLLVPFVCEKGDLDFAFNL---------------------------- 322
C N + +++ +C+ G D A L
Sbjct: 474 PYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGK 533
Query: 323 ---CKRTFSERCLVDQAP----LQLVVDRLAKELRVEEAKELVEL 360
K F+E + P +++D L KE +V EA EL+E+
Sbjct: 534 WKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEV 578
>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 917
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 147/310 (47%), Gaps = 15/310 (4%)
Query: 25 GSVIRGIYKENNLKRLVDKFKKS-SDLGRF----RTNTGIYTGTVQRLANAKRFRWIEEI 79
++++G+ + N+K ++ K SD + + N Y+ + L R E+
Sbjct: 602 ATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEAREL 661
Query: 80 LEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
+ K I LI + ++ +++A+ +F+EM + V +F+ L+
Sbjct: 662 FKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCK 721
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
K E + L + + + G P+ V+Y T++K + A L +M+K G D++
Sbjct: 722 EGKVIEANELLEVMIQR-GCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVV 780
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVN------MNVRPNVRSYNARLDGLAIEKQTKKAL 253
T+ TL+ G G A ++ + M++ N +P+V SY+ +DGL + +A
Sbjct: 781 TYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEAR 840
Query: 254 ELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFV 310
EL EM++ + P+V ++ +LI GF G LE+AK +N+ G +N + +++
Sbjct: 841 ELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGF 900
Query: 311 CEKGDLDFAF 320
C++G +D A
Sbjct: 901 CKEGQIDKAL 910
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 127/264 (48%), Gaps = 14/264 (5%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL-----PHKLGIEPD 162
A ++F +M C V++ L+ S L K++ P+ + +P+
Sbjct: 579 ISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPN 638
Query: 163 LVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWE 222
+SY+ II G D A L EM+ G+ D+I++ +L+ GF +G++ DA+ ++
Sbjct: 639 AISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFN 698
Query: 223 TMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEG 282
MV++ V+P+V +++ +D L E + +A EL+ M + P+ T+ L+KG
Sbjct: 699 EMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMND 758
Query: 283 NLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV------ 333
+ EA + + K GC + + L+ +C+ G++ A L K+ S+
Sbjct: 759 RISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKP 818
Query: 334 DQAPLQLVVDRLAKELRVEEAKEL 357
D +++D L K R +EA+EL
Sbjct: 819 DVISYSIIIDGLCKHGREDEAREL 842
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 105/205 (51%), Gaps = 9/205 (4%)
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
D+V+Y+T+IK + + A L M+K G R D IT+ TL+ G G A ++
Sbjct: 88 DIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLH 147
Query: 222 ETMVN------MNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
+ M+N + +P + SY+ +DGL +++ +A EL EM+++ + PDV ++ +LI
Sbjct: 148 QEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLI 207
Query: 276 KGFVNEGNLEEAKRWYNKS---GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCL 332
GF + G E+AK +N+ G + +L+ C++G + A L + C+
Sbjct: 208 HGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCI 267
Query: 333 VDQAPLQLVVDRLAKELRVEEAKEL 357
+D ++ L + R+ EA +L
Sbjct: 268 LDIVTYSTLIKGLCMKHRISEATQL 292
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 116/248 (46%), Gaps = 11/248 (4%)
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL 179
G C+ T++S++ ++ ++ DE LFK++ + G+ PD++SY ++I F G
Sbjct: 158 GIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQ-GMMPDVISYTSLIHGFCHSGKW 216
Query: 180 DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNAR 239
+ A L EM GI+ D+ T L+ F G+ +A ++ E MV+ ++ +Y+
Sbjct: 217 EKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTL 276
Query: 240 LDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY-----NKS 294
+ GL ++ + +A +L M+ PD + L+KG G + A + + S
Sbjct: 277 IKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTS 336
Query: 295 GCGM-----NKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKEL 349
G+ + +L+ +C++G + A L + C++D ++ L E
Sbjct: 337 QYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEH 396
Query: 350 RVEEAKEL 357
R+ EA L
Sbjct: 397 RISEATWL 404
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/356 (21%), Positives = 140/356 (39%), Gaps = 90/356 (25%)
Query: 88 DISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVD 147
D++ G LI ++ K A ++ + M R C +++++ L+ + E
Sbjct: 234 DVTTSGV---LIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEAT 290
Query: 148 GLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLD--------------------------- 180
LF + KLG PD ++Y T++K G ++
Sbjct: 291 QLFMSMK-KLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTT 349
Query: 181 ---------------SANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMV 225
AN LL M ++G LD++T++TL+ G R ++A ++ +M
Sbjct: 350 SSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQ 409
Query: 226 NMNVRPN-----------------------------------------VRSYNARLDGLA 244
+ RP+ + SY+ +DGL
Sbjct: 410 KLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLC 469
Query: 245 IEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS---GCGMNKA 301
+++ +A EL EM+++ I PDV ++ LI GF G E+AK +N+ G +
Sbjct: 470 KDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVT 529
Query: 302 IFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
+L+ +C+KG + A L + C++D +V L + R+ +A +L
Sbjct: 530 TSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQL 585
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 122/285 (42%), Gaps = 45/285 (15%)
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL 179
G C+ T++S++ ++ ++ DE LF+++ + GI PD++SY T+I F G
Sbjct: 451 GIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQ-GIMPDVISYTTLIHGFCLSGKW 509
Query: 180 DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNAR 239
+ A L EM GI+ D+ T + L+ G+ +A K+ E ++ +V +
Sbjct: 510 EKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTL 569
Query: 240 LDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS----- 294
+ GL ++ + KA +L +M+ P+V T L+KG GN++ A +
Sbjct: 570 VKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTS 629
Query: 295 ----GCGMNKAIFKLLVPFVCEKGDLDFAFNL---------------------------- 322
C N + +++ +C+ G D A L
Sbjct: 630 PYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGK 689
Query: 323 ---CKRTFSERCLVDQAP----LQLVVDRLAKELRVEEAKELVEL 360
K F+E + P +++D L KE +V EA EL+E+
Sbjct: 690 WKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEV 734
>gi|255660858|gb|ACU25598.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
Length = 418
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 143/318 (44%), Gaps = 26/318 (8%)
Query: 66 RLANAKRFRWI-----EEILEHQKQ----------YKDISKEGFTARL------IALYGK 104
RL +F W+ ++LEH + YK+I + G+ A L + + K
Sbjct: 90 RLTKKHKF-WVPFDTCRKVLEHLMKLKYFKLVWDFYKEILECGYPASLYFFNIVMHRFCK 148
Query: 105 AAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLV 164
A+ VFD + +V+SFN L+ + DE L K H G++PD+
Sbjct: 149 EGEMRRAQSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRL-KSAMHASGVQPDVY 207
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
+Y+ +I + +D AN L EM +G+ + +TF TL+ NG A +I++ M
Sbjct: 208 TYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVTFTTLIDVHCKNGMVDSAMEIYKQM 267
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
++ P++ +YN + GL + K+ L+ EM + PD T+ LI G EG+L
Sbjct: 268 LSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNGLKPDKITYTTLIDGCCKEGDL 327
Query: 285 EEA---KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLV 341
E A ++ K ++ + LV +C++G D A + + S D ++
Sbjct: 328 ETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGRADDAEKMFREMLSVGLKPDNGTYTMI 387
Query: 342 VDRLAKELRVEEAKELVE 359
++ K+ V A L++
Sbjct: 388 INEFCKKGDVRTASRLLK 405
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 87/173 (50%), Gaps = 1/173 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI ++ K M ++A +++ +M + ++++N L+ +V L ++
Sbjct: 247 LIDVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMN- 305
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD ++Y T+I +G L++A M K+ IRLD + + L+ G GR DA
Sbjct: 306 GLKPDKITYTTLIDGCCKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGRADDA 365
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
EK++ M+++ ++P+ +Y ++ + + A L+ EM+ P V T
Sbjct: 366 EKMFREMLSVGLKPDNGTYTMIINEFCKKGDVRTASRLLKEMQRDGHVPCVVT 418
>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 116/232 (50%), Gaps = 5/232 (2%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFT-ARLIALYGKAAMFENARKVFDEM 118
YT + + A E + Q + + G T LI + + + A +++DEM
Sbjct: 346 YTSLINTMCKAGNLNRAMEFFD-QMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEM 404
Query: 119 PGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKG 177
T++++NALL G CV S + +E GL + + K G+ PD+VSY+TII F
Sbjct: 405 IRSGFPPTIVTYNALLNGHCV-SGRMEEAIGLLRGMEGK-GLSPDVVSYSTIIAGFCRYQ 462
Query: 178 SLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYN 237
LD A + EM +KG+ D IT+++L+ G R +A +++ M+N ++ P+ +Y
Sbjct: 463 ELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYT 522
Query: 238 ARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
+ ++G E +AL L EM K PD T+ LI G + EAKR
Sbjct: 523 SLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKR 574
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 148/340 (43%), Gaps = 17/340 (5%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
+IRG NL+ + +F + + R N Y + KR I E K
Sbjct: 209 LIRGFCAAGNLEMGL-RFFEEMERNRCLPNVVTYNTVIGAYCKLKR------IDEAFKLL 261
Query: 87 KDISKEGFTARLIAL------YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNS 140
+ + EG L+ + E V EM + +++N L+
Sbjct: 262 RSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKV 321
Query: 141 KKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLIT 200
F + L ++ G+ PD+V+Y ++I G+L+ A +M +G+R + +T
Sbjct: 322 GNFHQALVLHSEMLRN-GLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVT 380
Query: 201 FNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMR 260
+ +L+ GF G +A +IW+ M+ P + +YNA L+G + + ++A+ L+ M
Sbjct: 381 YTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGME 440
Query: 261 SKEINPDVFTFYALIKGFVNEGNLEEAKRW---YNKSGCGMNKAIFKLLVPFVCEKGDLD 317
K ++PDV ++ +I GF L+ A + + G + + L+ +CE+ L+
Sbjct: 441 GKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLN 500
Query: 318 FAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
A +L + ++ L D+ +++ KE + EA L
Sbjct: 501 EACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNL 540
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 106/209 (50%), Gaps = 15/209 (7%)
Query: 118 MPGRNCEQTVLSFNALLGACVNSKK---FDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFV 174
MPG VLS+NA+L + V +K F E +++++ G+ ++ SYN +I+ F
Sbjct: 164 MPG------VLSYNAILDSIVRCRKPVIFAE--KVYREMIAS-GVSLNVFSYNILIRGFC 214
Query: 175 DKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVR 234
G+L+ EME+ +++T+NT++ + R +A K+ +M + PN+
Sbjct: 215 AAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLL 274
Query: 235 SYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN-- 292
+YN ++GL + ++ ++ EM K PD T+ L+ G+ GN +A ++
Sbjct: 275 TYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEM 334
Query: 293 -KSGCGMNKAIFKLLVPFVCEKGDLDFAF 320
++G + + L+ +C+ G+L+ A
Sbjct: 335 LRNGLPPDVVTYTSLINTMCKAGNLNRAM 363
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 114/280 (40%), Gaps = 54/280 (19%)
Query: 96 ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPH 155
+ +IA + + + A ++ EM + +++++L+ ++ +E LF+++ +
Sbjct: 452 STIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLN 511
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL---------- 205
K + PD +Y ++I + +G L+ A L EM KKG D +T+N L+
Sbjct: 512 K-SLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTR 570
Query: 206 ----------------------------------------LGFYSNGRFADAEKIWETMV 225
GF G +A++++E+M+
Sbjct: 571 EAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMI 630
Query: 226 NMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLE 285
N +PN YN + G + KA +L EM P T AL+K +EG E
Sbjct: 631 KRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKALYSEGMDE 690
Query: 286 EAKRWYNK--SGCGMNKA-IFKLLVPFVCEKGDLDFAFNL 322
+ C ++ A + K LV ++G++D FNL
Sbjct: 691 QLNLVIRDILRSCKLSDAELSKALVQINHKEGNIDAVFNL 730
>gi|255660860|gb|ACU25599.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
Length = 418
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 132/282 (46%), Gaps = 10/282 (3%)
Query: 86 YKDISKEGFTARL------IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
YK+I + G+ A L + + K A+ VFD + +V+SFN L+ +
Sbjct: 124 YKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMNGYIK 183
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
DE L K+ G++PD+ +Y+ +I + +D AN L EM G+ + +
Sbjct: 184 LGDLDEGFRL-KNAMRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGV 242
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
TF TL+ G NGR A I+ M+N P+V +YN + GL + K+A L+ EM
Sbjct: 243 TFTTLIDGHCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEM 302
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLE---EAKRWYNKSGCGMNKAIFKLLVPFVCEKGDL 316
K + PD T+ LI G EG+LE E + K ++ ++ L+ +C++G
Sbjct: 303 SRKGLKPDKITYTTLIDGSCKEGDLETAFELRERMIKESIRLDDVVYTALIFGLCQEGRA 362
Query: 317 DFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
A + + D ++++ K+ V++A EL+
Sbjct: 363 VDAEKMLREMLRVGLKPDDETYTMIMNEFCKKGDVKKASELL 404
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 104/222 (46%), Gaps = 4/222 (1%)
Query: 141 KKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLIT 200
K F V G +K++ + G L +N ++ F +G + A ++ + K G+R +++
Sbjct: 115 KYFKLVWGFYKEIL-ECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVS 173
Query: 201 FNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMR 260
FNTL+ G+ G + ++ M V+P+V +Y+ ++GL E + +A L GEM
Sbjct: 174 FNTLMNGYIKLGDLDEGFRLKNAMRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEML 233
Query: 261 SKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLD 317
+ P+ TF LI G G L+ A Y + G + + L+ +C+KGDL
Sbjct: 234 DNGLVPNGVTFTTLIDGHCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLK 293
Query: 318 FAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
A L + D+ ++D KE +E A EL E
Sbjct: 294 QARYLLDEMSRKGLKPDKITYTTLIDGSCKEGDLETAFELRE 335
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 84/173 (48%), Gaps = 1/173 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K + A ++ +M + V+++N L+ + L ++ K
Sbjct: 247 LIDGHCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRK- 305
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD ++Y T+I +G L++A L M K+ IRLD + + L+ G GR DA
Sbjct: 306 GLKPDKITYTTLIDGSCKEGDLETAFELRERMIKESIRLDDVVYTALIFGLCQEGRAVDA 365
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
EK+ M+ + ++P+ +Y ++ + KKA EL+ EM+ P V T
Sbjct: 366 EKMLREMLRVGLKPDDETYTMIMNEFCKKGDVKKASELLREMQRNGRVPCVVT 418
>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
Length = 814
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 157/364 (43%), Gaps = 27/364 (7%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
+VI G +KE ++ + D FK+ G + Y+ V L A+ E L
Sbjct: 224 TVIDGFFKEGDVNKACDLFKEMVQRG-IPPDFVTYSSVVHALCKARAMDKAEAFLRQMVN 282
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
+ LI Y ++ A +VF EM ++ V++FN L+G+ K E
Sbjct: 283 KGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKE 342
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
+F + K G PD+ SYN ++ + KG L L M GI + TFN L+
Sbjct: 343 ARDVFDTMAMK-GQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLI 401
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEIN 265
+ + G A I+ M + V+PNV +Y + L + A+E +M + +
Sbjct: 402 KAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVA 461
Query: 266 PDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
PD + ++ LI+GF G+L +AK ++ +G ++ +F ++ +C+ G + A N+
Sbjct: 462 PDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNI 521
Query: 323 CKRTFSERCLVDQAPLQLV----------VDRLAKELRVEEA--------KELVELGKTN 364
T + V P +V V ++ K LRV +A ++V N
Sbjct: 522 FDLTVN----VGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVN 577
Query: 365 SYCR 368
YC+
Sbjct: 578 GYCK 581
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 127/298 (42%), Gaps = 39/298 (13%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI Y M + A +F+EM + VL++ ++ A K D+ F + +
Sbjct: 400 LIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQ- 458
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ PD +Y+ +I+ F GSL A L+ E+ G+ LD++ F++++ GR DA
Sbjct: 459 GVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDA 518
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ I++ VN+ + P Y+ +DG + + +KAL + M S I P+ + L+ G
Sbjct: 519 QNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNG 578
Query: 278 FVNEGNLEEAKRWY--------------------------------------NKSGCGMN 299
+ G ++E + +SG MN
Sbjct: 579 YCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMN 638
Query: 300 KAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
K + +++ + + D A L K + +D L ++ + + RVEEAK+L
Sbjct: 639 KCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDL 696
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 130/275 (47%), Gaps = 9/275 (3%)
Query: 53 FRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ----YKDISKEGFTARLIALYGKAAMF 108
R + I ++ AKR +IL H+ D+ + + GK+
Sbjct: 142 LRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQA 201
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
++ ++ E G C V+++N ++ ++ LFK++ + GI PD V+Y++
Sbjct: 202 DDLLRMMAE-GGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQR-GIPPDFVTYSS 259
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
++ A ++D A L +M KG+ + T+N L+ G+ S G++ +A ++++ M +
Sbjct: 260 VVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQS 319
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
+ P+V ++N + L + K+A ++ M K NPDVF++ ++ G+ +G L +
Sbjct: 320 ILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMT 379
Query: 289 RWYN-KSGCGMNKAI--FKLLVPFVCEKGDLDFAF 320
++ G G+ I F +L+ G LD A
Sbjct: 380 DLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAM 414
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 96/198 (48%), Gaps = 4/198 (2%)
Query: 102 YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEP 161
Y E A +VFD M E + + L+ + DE LF+++ K GI+P
Sbjct: 544 YCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQK-GIKP 602
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
+ YN II + G A +EM + GI ++ T++ +L G + N F +A ++
Sbjct: 603 STILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLF 662
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
+ + MNV+ ++ + N + G+ ++ ++A +L + + P V T+ +I + E
Sbjct: 663 KELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKE 722
Query: 282 GNLEEAKRWYNK---SGC 296
G +EEA+ ++ +GC
Sbjct: 723 GLVEEAEDMFSSMQNAGC 740
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 113/237 (47%), Gaps = 26/237 (10%)
Query: 127 VLSFNALLGACVNSKKFDE-VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTL 185
++ N LL +K+ DE +D L P +LG PD+ SY+ ++K+ D+G A+ L
Sbjct: 146 IIIANHLLKGFCEAKRTDEALDILLHRTP-ELGCVPDVFSYSILLKSLCDQGKSGQADDL 204
Query: 186 LYEMEKKG--IRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
L M + G D++ +NT++ GF+ G A +++ MV + P+ +Y++ + L
Sbjct: 205 LRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHAL 264
Query: 244 AIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNK 300
+ KA + +M +K + P+ +T+ LI G+ + G +EA R + + +
Sbjct: 265 CKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDV 324
Query: 301 AIFKLLVPFVCEKGDLD------------------FAFNLCKRTFSER-CLVDQAPL 338
F +L+ +C+ G + F++N+ ++ + CLVD L
Sbjct: 325 VTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDL 381
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/190 (20%), Positives = 84/190 (44%), Gaps = 6/190 (3%)
Query: 106 AMFENARKV-----FDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIE 160
+FE R V F EM +++ +L ++ FDE LFK+L + ++
Sbjct: 613 GLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKEL-RAMNVK 671
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
D+++ NT+I ++ A L + + G+ ++T++ ++ G +AE +
Sbjct: 672 IDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDM 731
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
+ +M N P+ R N + L + + +A + ++ + + + T L+ F +
Sbjct: 732 FSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSS 791
Query: 281 EGNLEEAKRW 290
+G E R+
Sbjct: 792 KGTCREHIRF 801
>gi|255566084|ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536757|gb|EEF38398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1016
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 134/265 (50%), Gaps = 4/265 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I+ Y K E AR +++EM V+++++++ + E L +++ K+
Sbjct: 244 IISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMK-KM 302
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++P+ V+Y T+I + GS A ++ +G+ LDL+ TL+ G + + + +A
Sbjct: 303 GVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEA 362
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
E ++ + +N+ PN +Y A +DG ++ L+ EM K INP+V T+ ++I G
Sbjct: 363 EDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIING 422
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
+ +G L+EA K N ++ +L+ C+ G + A +L V+
Sbjct: 423 YTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVN 482
Query: 335 QAPLQLVVDRLAKELRVEEAKELVE 359
++V+ L + R++EA+EL++
Sbjct: 483 NVLFDVLVNNLKRGKRMDEAEELLK 507
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 108/215 (50%), Gaps = 5/215 (2%)
Query: 96 ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPH 155
A LI Y KA E A +++EM + + F+ L+ K+ DE + L KD+
Sbjct: 452 AILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTS 511
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
+ G+ D V+Y +++ F G +A ++ EM +K I D++T+N L+ G +G++
Sbjct: 512 R-GLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKY- 569
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
+A+ ++ M+ M + PN +YN + + + ALEL EM+S +I P T L+
Sbjct: 570 EAKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLV 629
Query: 276 KGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLV 307
G G +E+A N+ G N I ++L+
Sbjct: 630 VGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLL 664
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 121/264 (45%), Gaps = 6/264 (2%)
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
+TA LI Y K E + EM ++ V+++++++ DE + K +
Sbjct: 381 YTA-LIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKM 439
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
+ I P+ Y +I + G + A L EM+ G++++ + F+ L+ R
Sbjct: 440 LDQ-NIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKR 498
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
+AE++ + + + + + +Y + +DG + AL +V EM K I DV T+
Sbjct: 499 MDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNV 558
Query: 274 LIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSER 330
LI G + G EAK Y+ + G N+A + +++ C++G+LD A L S +
Sbjct: 559 LINGLLEHGKY-EAKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHK 617
Query: 331 CLVDQAPLQLVVDRLAKELRVEEA 354
+ +V L++ +E+A
Sbjct: 618 IMPSSITCNTLVVGLSEAGEIEKA 641
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 117/286 (40%), Gaps = 28/286 (9%)
Query: 97 RLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHK 156
+LI + + ++ EM V + N L+ A L DL
Sbjct: 15 QLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGNLI----LALDLLRN 70
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
+ +E D V+YNT+I F G ++ A L M KK D IT N L+ GF G
Sbjct: 71 VDVEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNILVKGFCRIGLAKY 130
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
E+I + +V+ +V +N +DG + AL+LV MR + + D+ ++ LI
Sbjct: 131 GERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIVSYNTLIN 190
Query: 277 GFVNEGNLEEAKRWYNK--SGCGMNKAIF----------------------KLLVPFVCE 312
GF G ++AK ++ G+ ++F ++ C+
Sbjct: 191 GFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEADLITYTTIISTYCK 250
Query: 313 KGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
+ L+ A L + L D +V+ L K+ R+ EA+EL+
Sbjct: 251 QHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELL 296
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/323 (20%), Positives = 125/323 (38%), Gaps = 59/323 (18%)
Query: 93 GFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKD 152
GF LI Y KA A + + M ++S+N L+ ++D+ L +
Sbjct: 149 GFNT-LIDGYCKAGEMSLALDLVERMRKEGLLSDIVSYNTLINGFCKRGEYDKAKSLLHE 207
Query: 153 LPHKLGI--------------------EPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKK 192
+ G+ E DL++Y TII + + L+ A L EM
Sbjct: 208 ISESRGVKDSVFFNIDDRIKKDDNLNLEADLITYTTIISTYCKQHGLEEARALYEEMIIN 267
Query: 193 GIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARL------------ 240
G D++T+++++ G +GR ++A+++ M M V PN +Y +
Sbjct: 268 GFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEA 327
Query: 241 -----------------------DGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
DGL + K+A ++ + + P+ T+ ALI G
Sbjct: 328 FACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDG 387
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
+ G++E + + N + ++ +KG LD A N+ K+ + + +
Sbjct: 388 YCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPN 447
Query: 335 QAPLQLVVDRLAKELRVEEAKEL 357
+++D K + E A +L
Sbjct: 448 AYVYAILIDGYCKAGKQEIATDL 470
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 117/285 (41%), Gaps = 49/285 (17%)
Query: 50 LGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFT------ARLIALYG 103
L + N ++ V L KR EE+L KD++ G L+ +
Sbjct: 476 LSGLKVNNVLFDVLVNNLKRGKRMDEAEELL------KDVTSRGLLLDHVNYTSLMDGFF 529
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
KA A + +EM ++ V+++N L+ + K+ E ++ + ++G+ P+
Sbjct: 530 KAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKY-EAKSVYSGMI-EMGLAPNQ 587
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
+YN +IKA+ +G LD+A L EM+ I IT NTL++G G A +
Sbjct: 588 ATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNE 647
Query: 224 MVNMNVRPNVRSYNARLD---------------------GLAIEKQ-------------- 248
M M + PN+ + L+ GL I ++
Sbjct: 648 MSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRM 707
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK 293
TKKA ++ M D T+ ALI+G+ ++++A Y +
Sbjct: 708 TKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQ 752
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 94/229 (41%), Gaps = 36/229 (15%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I Y K +NA ++++EM + ++ N L+ + + ++ + ++ +
Sbjct: 593 MIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMS-VM 651
Query: 158 GIEPDLV-----------------------------------SYNTIIKAFVDKGSLDSA 182
GI P+LV +YN +I F A
Sbjct: 652 GIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKA 711
Query: 183 NTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDG 242
++L M + G D +T+N L+ G+ + A + M+N V PN+ +YN L G
Sbjct: 712 TSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGG 771
Query: 243 LAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY 291
L + EL +M+ +NPD T+ LI G+ GN +E+ R Y
Sbjct: 772 LLGAGLMAERDELFDKMKENGLNPDASTYDTLISGYGKIGNKKESIRLY 820
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 81/175 (46%), Gaps = 6/175 (3%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G D V+YN +I+ + + + A +M +G+ +++T+N LL G G A+
Sbjct: 722 GFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAER 781
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+++++ M + P+ +Y+ + G K+++ L EM ++ P T+ LI
Sbjct: 782 DELFDKMKENGLNPDASTYDTLISGYGKIGNKKESIRLYCEMVAQGFVPKTSTYNVLISD 841
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVC---EKGDLDFAFNLCKRT 326
F G +++A+ N+ G + + + +L+ C + DLD RT
Sbjct: 842 FAKVGKMDQARELLNEMQVRGVPPSSSTYDILICGWCNLSKHPDLDRTLKKIYRT 896
>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 654
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 152/353 (43%), Gaps = 56/353 (15%)
Query: 25 GSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIY-----TGTVQRLANAKRFRWIEEI 79
G+++ G+ K + ++ +K ++ + N I+ T + ++ R+ +++
Sbjct: 218 GTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQL 277
Query: 80 LEHQKQYKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRN---------------- 122
L+ + K IS + T LI + K F A +++DEM R
Sbjct: 278 LQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFC 337
Query: 123 -------------------CEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
C +++FN L+ +K+ D+ L ++ G+ +
Sbjct: 338 KQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEA-GLVANT 396
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
++Y T+I F G L++A LL EM G+ +++T NTLL G NG+ DA ++++
Sbjct: 397 ITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKA 456
Query: 224 MVNM-----------NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFY 272
M V P+V++YN + GL E + +A EL EM + I PD T+
Sbjct: 457 MQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYN 516
Query: 273 ALIKGFVNEGNLEEAKRWYNKSGC---GMNKAIFKLLVPFVCEKGDLDFAFNL 322
++I G + L+EA + ++ G N F L+ C+ G +D L
Sbjct: 517 SVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLEL 569
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 120/279 (43%), Gaps = 25/279 (8%)
Query: 26 SVIRGIYKENNLKRLVDKF------KKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEI 79
S+I G K+N L F S D+ F T Y AKR ++
Sbjct: 331 SMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGY-------CRAKRVDDGIKL 383
Query: 80 LEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACV 138
L + ++ LI + + A+ + EM V++ N LL G C
Sbjct: 384 LHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCD 443
Query: 139 NSKKFDEVDGLFK---------DLPHKL-GIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
N K D ++ +FK D H G+EPD+ +YN +I +++G A L E
Sbjct: 444 NGKLKDALE-MFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEE 502
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
M +GI D IT+N+++ G R +A +++++M + + PNV ++ ++G +
Sbjct: 503 MPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGR 562
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
LEL EM + I + T+ LI GF GN+ A
Sbjct: 563 VDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGA 601
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 108/239 (45%), Gaps = 15/239 (6%)
Query: 135 GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGI 194
G C +S ++ E L +++ + I PD+V+YN +I AFV +G A L EM +GI
Sbjct: 264 GFC-SSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGI 322
Query: 195 RLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALE 254
IT+++++ GF R AE ++ M P++ ++N + G K+ ++
Sbjct: 323 IPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIK 382
Query: 255 LVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVC 311
L+ EM + + T+ LI GF G+L A+ + SG N L+ +C
Sbjct: 383 LLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLC 442
Query: 312 EKGDLDFAFNLCKRTFSERCLVDQA-----------PLQLVVDRLAKELRVEEAKELVE 359
+ G L A + K + +D + +++ L E + EA+EL E
Sbjct: 443 DNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYE 501
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 79/153 (51%), Gaps = 1/153 (0%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
F A ++++EMP R +++N+++ + DE +F + K P++V++
Sbjct: 493 FLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSK-SFSPNVVTFT 551
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
T+I + G +D L EM ++GI + IT+ TL+ GF G A I++ M+
Sbjct: 552 TLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMAS 611
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMR 260
V P+ + L GL +++ K+A+ ++ +++
Sbjct: 612 GVYPDTITIRNMLTGLWSKEELKRAVAMLEDLQ 644
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 102/249 (40%), Gaps = 49/249 (19%)
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
KLG P +V+++T++ + + A L ++M K + +TF TL+ G GR
Sbjct: 141 KLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQMCKPNV----VTFTTLMNGLCREGRVV 196
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS-------------- 261
+A + + M+ ++PN +Y +DG+ T AL L+ +M
Sbjct: 197 EAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLE 256
Query: 262 ----------------------------KEINPDVFTFYALIKGFVNEGNLEEAKRWYNK 293
K+I+PDV T+ ALI FV EG EA+ Y++
Sbjct: 257 RRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDE 316
Query: 294 ---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELR 350
G + + ++ C++ LD A ++ ++ C D ++ + R
Sbjct: 317 MLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKR 376
Query: 351 VEEAKELVE 359
V++ +L+
Sbjct: 377 VDDGIKLLH 385
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 82/180 (45%), Gaps = 5/180 (2%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
E+A +F +M +V+ F L+G V + D V L + + + + + S+
Sbjct: 59 LEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRR-VPCNAYSFT 117
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
++K F L A + ++ K G ++TF+TLL G R ++A ++ M
Sbjct: 118 ILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQM--- 174
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+PNV ++ ++GL E + +A+ L+ M + P+ T+ ++ G G+ A
Sbjct: 175 -CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSA 233
>gi|356561705|ref|XP_003549120.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 445
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 137/261 (52%), Gaps = 7/261 (2%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
KA + ++ ++ G + + V+ +N ++ + +K + ++ ++ K GI PD+
Sbjct: 175 KAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVK-GISPDV 233
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR---FADAEKI 220
V+Y T+I F G + A +LL EM+ K I D+ TF+ L+ G+ +A +
Sbjct: 234 VTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDEAMSL 293
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
+E M + N+ P++ +YN+ +DGL ++A+ L+ EM+ I PDV+++ L+ G
Sbjct: 294 FEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCK 353
Query: 281 EGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAP 337
G LE AK ++ GC +N + +++ +C+ G A +L + + C+ +
Sbjct: 354 GGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDLKSKMEGKGCMPNAIT 413
Query: 338 LQLVVDRLAKELRVEEAKELV 358
+ ++ L+++ ++A++++
Sbjct: 414 FRTIICALSEKDENDKAEKIL 434
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 132/323 (40%), Gaps = 21/323 (6%)
Query: 50 LGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIAL------YG 103
L R T ++ + L KR+ + + +K G T L L +
Sbjct: 51 LMRPPPPTFLFNNILSSLVKNKRYPTVISL------FKQFEPNGITPDLCTLSILINCFC 104
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEPD 162
A A VF + R ++ N L+ G C + + F D G + D
Sbjct: 105 HQAHITLAFSVFANILKRGFHPDAITLNTLIKGLCFRGEIKKTL--YFHDQVVAQGFQLD 162
Query: 163 LVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWE 222
VSY T+I G + LL ++E ++ D++ +NT++ N DA ++
Sbjct: 163 QVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYS 222
Query: 223 TMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEG 282
M+ + P+V +Y + G I + K+A L+ EM+ K INPDV+TF LI EG
Sbjct: 223 EMIVKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEG 282
Query: 283 N---LEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQA 336
++EA + + + + L+ +C+ L+ A L K D
Sbjct: 283 KKKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVY 342
Query: 337 PLQLVVDRLAKELRVEEAKELVE 359
+++D L K R+E AKE +
Sbjct: 343 SYTILLDGLCKGGRLEIAKEFFQ 365
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 75/160 (46%), Gaps = 1/160 (0%)
Query: 103 GKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPD 162
GK M + A +F+EM +N ++++N+L+ + + L K++ GI+PD
Sbjct: 282 GKKKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEH-GIQPD 340
Query: 163 LVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWE 222
+ SY ++ G L+ A + KG L++ +N ++ G G F +A +
Sbjct: 341 VYSYTILLDGLCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDLKS 400
Query: 223 TMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
M PN ++ + L+ + + KA +++ EM ++
Sbjct: 401 KMEGKGCMPNAITFRTIICALSEKDENDKAEKILREMIAR 440
>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 161/343 (46%), Gaps = 11/343 (3%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKR----FRWIEEILE 81
++I+G+ E+ + F + LG N Y ++ L + +E+L
Sbjct: 166 TLIKGLCMEHRISEATRLFLRMQKLG-CTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLN 224
Query: 82 HQKQYKDISKEGFTARLIALYG--KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
QY K G I + G K + A+++F+EM + V+S++ L+
Sbjct: 225 DASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCC 284
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
+ K+D+ LF ++ + G++PD+V+++ +I +G + A LL M ++GI +LI
Sbjct: 285 AGKWDQSKHLFDEMVDQ-GVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLI 343
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
T+N+L+ GF G A +++ +M + + P+ SY ++G + K+A+ L EM
Sbjct: 344 TYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEM 403
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDL 316
+P+V T+ L+KG +G + +AK+ + G N I+ + + +C+ L
Sbjct: 404 LQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCL 463
Query: 317 DFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
A L S ++ ++D L K ++E A EL E
Sbjct: 464 FEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFE 506
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 94/414 (22%), Positives = 165/414 (39%), Gaps = 82/414 (19%)
Query: 25 GSVIRGIYKENNLKRLVDKFKKS-SDLGRFRTNT--GI--YTGTVQRLANAKRFRWIEEI 79
G++I+G+ + N+ + K+ +D ++ N G+ Y+ + L R +E+
Sbjct: 200 GTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKEL 259
Query: 80 LEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
E K I + LI + A ++ ++ +FDEM + + +++F+ L+
Sbjct: 260 FEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCK 319
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
K E L + + + GI P+L++YN++I F G L+SA L M KG+ D I
Sbjct: 320 EGKVTEAKKLLEVMIQR-GIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEI 378
Query: 200 -----------------------------------TFNTLLLGFYSNGRFADAEKIWETM 224
T+ TLL G + G+ DA+K++ M
Sbjct: 379 SYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVM 438
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS----------------------- 261
V N + Y LDGL +A+EL E++S
Sbjct: 439 KTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKL 498
Query: 262 ------------KEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLL 306
+ + PDV T+ +I GF G ++ A + K +GC + + L
Sbjct: 499 ETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTL 558
Query: 307 VPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVEL 360
+ CE L+ L + + + A +VVD L K+ E+ K+ V+L
Sbjct: 559 LCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKD---EKYKKFVDL 609
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 84/151 (55%), Gaps = 2/151 (1%)
Query: 106 AMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVS 165
+FE A ++F+E+ N + + +++ L+ + K + LF+ L + G++PD+V+
Sbjct: 462 CLFE-AMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQE-GLQPDVVT 519
Query: 166 YNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMV 225
YN +I F G +D+AN L +ME+ G D+I +NTLL GF + + K+ MV
Sbjct: 520 YNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMV 579
Query: 226 NMNVRPNVRSYNARLDGLAIEKQTKKALELV 256
+V PN S +D L +++ KK ++L+
Sbjct: 580 QKDVSPNAASCTIVVDMLCKDEKYKKFVDLL 610
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 106/248 (42%), Gaps = 45/248 (18%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL------- 163
A FD M + + SFN LLG + ++ L+ ++ G+ PDL
Sbjct: 75 AFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEM-RLAGLSPDLFTLSILA 133
Query: 164 ----------------------------VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIR 195
V+Y T+IK + + A L M+K G
Sbjct: 134 NCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCT 193
Query: 196 LDLITFNTLLLGFYSNGRFADAEKIWETMVN------MNVRPNVRSYNARLDGLAIEKQT 249
+ +T+ TL+ G G A K+ + M+N +N +P V +Y+ +DGL +
Sbjct: 194 PNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGRE 253
Query: 250 KKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLL 306
+A EL EM+++ + PDV ++ LI GF G +++K +++ G + F +L
Sbjct: 254 DEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVL 313
Query: 307 VPFVCEKG 314
+ +C++G
Sbjct: 314 IDTLCKEG 321
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 84/215 (39%), Gaps = 36/215 (16%)
Query: 150 FKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFY 209
F DL + P + S+N ++ +L EM G+ DL T + L
Sbjct: 78 FFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLC 137
Query: 210 SNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVF 269
+ R ++A ++ PNV +Y + GL +E + +A L M+ P+
Sbjct: 138 NVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAV 197
Query: 270 TFYALIKGFVNEGNLEEAKRWY-----NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCK 324
T+ LIKG GN+ A + + + S G+N C+ G + ++
Sbjct: 198 TYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVN-----------CKPGVITYS----- 241
Query: 325 RTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+++D L K R +EAKEL E
Sbjct: 242 ---------------IIIDGLCKVGREDEAKELFE 261
>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
Length = 691
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 139/299 (46%), Gaps = 9/299 (3%)
Query: 35 NNLKRLVDKFKKSSDLGRFRTN---TGIYTGTV--QRLANAKRFRWIEEILEHQKQYKDI 89
+ L R D S G++ N G YT ++ L + EE+L+ +
Sbjct: 313 DGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLV 372
Query: 90 SKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGL 149
LI Y + E A F +M R+ + +++NAL+ +++ L
Sbjct: 373 PTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDL 432
Query: 150 FKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFY 209
++ G+ P + ++NT+I A+ G L+ +L EM++ G++ +++++ +++ F
Sbjct: 433 LMEMQDN-GVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFC 491
Query: 210 SNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVF 269
NG+ +A I + M + +V PN + YNA +D +A LV +M+S I+P +
Sbjct: 492 KNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIV 551
Query: 270 TFYALIKGFVNEGNLEEAKRWYNKSGCGM---NKAIFKLLVPFVCEKGDLDFAFNLCKR 325
T+ LIKG N+ + EA+ N + + L+ C +G++D A +L +R
Sbjct: 552 TYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQR 610
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 109/235 (46%), Gaps = 3/235 (1%)
Query: 60 YTGTVQRLANAKRFRWIEEIL-EHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEM 118
Y + L A+R +++L E Q + + E F LI YG+ E V EM
Sbjct: 413 YNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNT-LIDAYGRTGQLEKCFIVLSEM 471
Query: 119 PGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGS 178
+ V+S+ +++ A + K E + D+ HK + P+ YN II A+V+ G
Sbjct: 472 QENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHK-DVLPNAQVYNAIIDAYVEHGP 530
Query: 179 LDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNA 238
D A L+ +M+ GI ++T+N L+ G + + ++AE+I ++ N + P+ SYN
Sbjct: 531 NDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNT 590
Query: 239 RLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK 293
+ KAL+L M I V T++ LI G G L E + Y K
Sbjct: 591 LISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQK 645
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 94/204 (46%), Gaps = 3/204 (1%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ P V YNT+I + G L+ A + +M+ + I+ D IT+N L+ G R +A
Sbjct: 370 GLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNA 429
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ + M + V P V ++N +D Q +K ++ EM+ + P+V ++ +++
Sbjct: 430 QDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNA 489
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
F G + EA + N ++ ++ E G D AF L ++ S
Sbjct: 490 FCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPS 549
Query: 335 QAPLQLVVDRLAKELRVEEAKELV 358
L++ L + ++ EA+E++
Sbjct: 550 IVTYNLLIKGLCNQSQISEAEEII 573
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 108/233 (46%), Gaps = 4/233 (1%)
Query: 129 SFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
S+N ++ + + + +F ++ + + P+ ++YNT+I + G L++ L +
Sbjct: 202 SYNVVIAGMWRAGRGGDAVEVFDEMTER-AVLPNHITYNTMIDGHIKGGDLEAGFRLRDQ 260
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
M G++ + IT+N LL G GR + + + M + + P+ +Y+ DGL+
Sbjct: 261 MVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGD 320
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL---EEAKRWYNKSGCGMNKAIFKL 305
+K L L G+ + +T L+ G +G + EE + +G + I+
Sbjct: 321 SKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNT 380
Query: 306 LVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
L+ C+ G+L+ AF+ + S D +++ L K R+ A++L+
Sbjct: 381 LINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLL 433
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 3/171 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLP-HK 156
+I Y + + A + ++M +++++N L+ N + E + + L H+
Sbjct: 521 IIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHR 580
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
L PD VSYNT+I A +G++D A L M K GI+ + T++ L+ G GR +
Sbjct: 581 L--IPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNE 638
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPD 267
E +++ M+ NV P+ +N ++ + KA +L EM K N D
Sbjct: 639 MEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKRNNHD 689
>gi|15221540|ref|NP_172145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205637|sp|Q9SHK2.1|PPR17_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g06580
gi|6692678|gb|AAF24812.1|AC007592_5 F12K11.8 [Arabidopsis thaliana]
gi|332189887|gb|AEE28008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 500
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 107/195 (54%), Gaps = 1/195 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + + A A +M E ++++F +L+ + +F E L + L
Sbjct: 120 LIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIV-GL 178
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G EP++V YNTII + +KG +++A +L M+K GIR D++T+N+L+ + +G + +
Sbjct: 179 GYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVS 238
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+I M+ M + P+V +++A +D E Q +A + EM + +NP++ T+ +LI G
Sbjct: 239 ARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLING 298
Query: 278 FVNEGNLEEAKRWYN 292
G L+EAK+ N
Sbjct: 299 LCIHGLLDEAKKVLN 313
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 132/268 (49%), Gaps = 8/268 (2%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I + ++ + +D K +G R + Y + RL ++ + IL +
Sbjct: 189 TIIDSLCEKGQVNTALDVLKHMKKMG-IRPDVVTYNSLITRLFHSGTWGVSARILSDMMR 247
Query: 86 YKDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKF 143
IS + T + LI +YGK A+K ++EM R+ ++++N+L+ G C++
Sbjct: 248 M-GISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGL-L 305
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT 203
DE + L K G P+ V+YNT+I + +D +L M + G+ D T+NT
Sbjct: 306 DEAKKVLNVLVSK-GFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNT 364
Query: 204 LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
L G+ G+F+ AEK+ MV+ V P++ ++N LDGL + KAL + +++ +
Sbjct: 365 LYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSK 424
Query: 264 INPDVFTFYALIKGFVNEGNLEEAKRWY 291
+ T+ +IKG +E+A WY
Sbjct: 425 TVVGIITYNIIIKGLCKADKVEDA--WY 450
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 119/250 (47%), Gaps = 4/250 (1%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
F A + D++ G E V+ +N ++ + + + + K + K+GI PD+V+YN
Sbjct: 165 FYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMK-KMGIRPDVVTYN 223
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
++I G+ + +L +M + GI D+ITF+ L+ + G+ +A+K + M+
Sbjct: 224 SLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQR 283
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+V PN+ +YN+ ++GL I +A +++ + SK P+ T+ LI G+ +++
Sbjct: 284 SVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDG 343
Query: 288 KRW---YNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDR 344
+ ++ G + + L C+ G A + R S D +++D
Sbjct: 344 MKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDG 403
Query: 345 LAKELRVEEA 354
L ++ +A
Sbjct: 404 LCDHGKIGKA 413
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 124/289 (42%), Gaps = 39/289 (13%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
F +A +F +M + +++ F+ LL A K++ V LF+ L LGI DL S+
Sbjct: 60 FNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHL-EMLGISHDLYSFT 118
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
T+I F L A + L +M K G ++TF +L+ GF RF +A + + +V +
Sbjct: 119 TLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGL 178
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALE--------------------------------- 254
PNV YN +D L + Q AL+
Sbjct: 179 GYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVS 238
Query: 255 --LVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPF 309
++ +M I+PDV TF ALI + EG L EAK+ YN + N + L+
Sbjct: 239 ARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLING 298
Query: 310 VCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
+C G LD A + S+ + +++ K RV++ +++
Sbjct: 299 LCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKIL 347
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 77/166 (46%), Gaps = 1/166 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI Y KA ++ K+ M + ++N L + KF + + +
Sbjct: 330 LINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMV-SC 388
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ PD+ ++N ++ D G + A L +++K + +IT+N ++ G + DA
Sbjct: 389 GVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDA 448
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
++ ++ V P+V +Y + GL ++ ++A EL +M+ ++
Sbjct: 449 WYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKED 494
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 77/193 (39%), Gaps = 43/193 (22%)
Query: 138 VNSKKFDEVDGLFKDLP--HKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIR 195
++S KF++ LF D+ H L P +V ++ ++ A ++ +L +E GI
Sbjct: 55 LHSIKFNDALTLFCDMAESHPL---PSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGIS 111
Query: 196 LDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALEL 255
DL +F TL+ F R + AL
Sbjct: 112 HDLYSFTTLIDCFCRCARLS-----------------------------------LALSC 136
Query: 256 VGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK-SGCGM--NKAIFKLLVPFVCE 312
+G+M P + TF +L+ GF + EA ++ G G N I+ ++ +CE
Sbjct: 137 LGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCE 196
Query: 313 KGDLDFAFNLCKR 325
KG ++ A ++ K
Sbjct: 197 KGQVNTALDVLKH 209
>gi|356549285|ref|XP_003543024.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Glycine max]
Length = 479
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 151/344 (43%), Gaps = 44/344 (12%)
Query: 21 PKFIGS--VIRGIYKENNLKRLVDKF-KKSSDLGR-FRTNTGIYTGTVQRLANAKRFRWI 76
PK I + V++ I E ++ + V+ F +++ G FR + + + RL +FR
Sbjct: 10 PKQITNSLVVQLIKAEKDVHKAVNMFDSATAEYGNGFRHDHETFGLIISRLVTVNQFRPA 69
Query: 77 EEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQT---------- 126
E +LE KQ K + E + YG+ +A +VF +M G T
Sbjct: 70 EGMLERMKQEKCMVTEDIFLSICRGYGRVHRPLDAIRVFHKMEGFQLRPTQKAYLTILDI 129
Query: 127 -------------------------VLSFNALLGA-CVNSKKFDEVDGLFKDLPHKLGIE 160
V+S N L+ A C N + D +F+++P++ G +
Sbjct: 130 LVEENHVKRAIGFYREMRELGIPSSVVSLNILIKALCKNKETVDSALRIFQEMPNR-GCQ 188
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
PD +Y T+I G++ A L EME+KG ++T+ +L+ G + +A +
Sbjct: 189 PDSYTYGTLINGLCRLGNISEAKELFKEMEQKGFSASVVTYTSLIHGLCQSNNLDEAIGL 248
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
E M ++ PNV +Y++ +DGL + +A++L+ M K P++ T+ LI G
Sbjct: 249 LEEMKRNDIEPNVFTYSSLMDGLCKGGHSSQAMQLLEVMDKKHHLPNMVTYSTLINGLCK 308
Query: 281 EGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFN 321
E L EA ++ G N ++ ++ +C G A N
Sbjct: 309 ERKLREAVEILDRMRIQGLKPNAGLYGKIISGLCAAGSYQEAAN 352
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 142/329 (43%), Gaps = 55/329 (16%)
Query: 86 YKDISKEGFTARLI-------ALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACV 138
Y+++ + G + ++ AL ++A ++F EMP R C+ ++ L+
Sbjct: 143 YREMRELGIPSSVVSLNILIKALCKNKETVDSALRIFQEMPNRGCQPDSYTYGTLINGLC 202
Query: 139 NSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL 198
E LFK++ K G +V+Y ++I +LD A LL EM++ I ++
Sbjct: 203 RLGNISEAKELFKEMEQK-GFSASVVTYTSLIHGLCQSNNLDEAIGLLEEMKRNDIEPNV 261
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
T+++L+ G G + A ++ E M + PN+ +Y+ ++GL E++ ++A+E++
Sbjct: 262 FTYSSLMDGLCKGGHSSQAMQLLEVMDKKHHLPNMVTYSTLINGLCKERKLREAVEILDR 321
Query: 259 MRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKA-------------- 301
MR + + P+ + +I G G+ +EA + ++ G N+A
Sbjct: 322 MRIQGLKPNAGLYGKIISGLCAAGSYQEAANFIDEMVLGGISPNRASWSLHVRMHNMVVQ 381
Query: 302 ----------------------------IFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV 333
F LV C++GDL A + + + C+
Sbjct: 382 GLCNNVDPPRAFQLYLSMRTRCISVEIDTFDCLVKCFCKRGDLHKAARILEEMVLDGCIP 441
Query: 334 DQAPLQLVVDRLAKELRVEEAKE--LVEL 360
D+ +V+ L +V EA E LVEL
Sbjct: 442 DEGVWNVVIGGLWDRKKVREATEQLLVEL 470
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 120/247 (48%), Gaps = 21/247 (8%)
Query: 79 ILEHQKQYKDISKEGFTARLIA----LYG--KAAMFENARKVFDEMPGRNCEQTVLSFNA 132
I E ++ +K++ ++GF+A ++ ++G ++ + A + +EM + E V ++++
Sbjct: 207 ISEAKELFKEMEQKGFSASVVTYTSLIHGLCQSNNLDEAIGLLEEMKRNDIEPNVFTYSS 266
Query: 133 LL-GACVNSKKFDEVDGL-FKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEME 190
L+ G C + L D H L P++V+Y+T+I + L A +L M
Sbjct: 267 LMDGLCKGGHSSQAMQLLEVMDKKHHL---PNMVTYSTLINGLCKERKLREAVEILDRMR 323
Query: 191 KKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPN-------VRSYNARLDGL 243
+G++ + + ++ G + G + +A + MV + PN VR +N + GL
Sbjct: 324 IQGLKPNAGLYGKIISGLCAAGSYQEAANFIDEMVLGGISPNRASWSLHVRMHNMVVQGL 383
Query: 244 AIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNK 300
+A +L MR++ I+ ++ TF L+K F G+L +A R + GC ++
Sbjct: 384 CNNVDPPRAFQLYLSMRTRCISVEIDTFDCLVKCFCKRGDLHKAARILEEMVLDGCIPDE 443
Query: 301 AIFKLLV 307
++ +++
Sbjct: 444 GVWNVVI 450
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 72/171 (42%), Gaps = 4/171 (2%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G D ++ II V A +L M+++ + F ++ G+ R DA
Sbjct: 45 GFRHDHETFGLIISRLVTVNQFRPAEGMLERMKQEKCMVTEDIFLSICRGYGRVHRPLDA 104
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+++ M +RP ++Y LD L E K+A+ EMR I V + LIK
Sbjct: 105 IRVFHKMEGFQLRPTQKAYLTILDILVEENHVKRAIGFYREMRELGIPSSVVSLNILIKA 164
Query: 278 FV-NEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCK 324
N+ ++ A R + + GC + + L+ +C G++ A L K
Sbjct: 165 LCKNKETVDSALRIFQEMPNRGCQPDSYTYGTLINGLCRLGNISEAKELFK 215
>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
Length = 1512
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 155/341 (45%), Gaps = 13/341 (3%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANA---KRFRWIEEILEH 82
S++ G+ + LK ++ FK+ G + Y + L+ A K W ++
Sbjct: 1125 SLMDGLCRFGRLKEALEFFKEMEGRG-ISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVD 1183
Query: 83 QKQYKDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSK 141
+ S + FT LI K A+++ + M + E +L++N L+
Sbjct: 1184 ----RGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVG 1239
Query: 142 KFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITF 201
+ ++ LF+ L + GI+ ++ SYN +I + +D A EM KG++ +T+
Sbjct: 1240 QLEDATKLFESLADR-GIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTY 1298
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS 261
NTL+ +GR A+K++ M + +Y LDGL ++A++L ++
Sbjct: 1299 NTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKK 1358
Query: 262 KEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDF 318
E P++ F L+ G G LEEA + ++ K+G + + +L+ +C KG L
Sbjct: 1359 TEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSE 1418
Query: 319 AFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
A L + + CL D +++ L KE + EA +L+E
Sbjct: 1419 AVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLE 1459
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 125/259 (48%), Gaps = 5/259 (1%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
+ A + F EM GR V ++N+L+ + + EV F +L G PD ++
Sbjct: 1136 LKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVT-WFLNLMVDRGFSPDAFTFT 1194
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
+I +G + A +L M KG D++T+NTL+ G G+ DA K++E++ +
Sbjct: 1195 ILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADR 1254
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
++ NV SYN ++G +++ +A EMR K + P T+ LI G + A
Sbjct: 1255 GIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTA 1314
Query: 288 KRWY-NKSGCG--MNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDR 344
++ + CG + + + +L+ +C+ G L+ A +L + + +++D
Sbjct: 1315 QKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDG 1374
Query: 345 LAKELRVEEA-KELVELGK 362
+ + ++EEA K+ E+ K
Sbjct: 1375 MCRAGKLEEAWKQFDEISK 1393
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 122/267 (45%), Gaps = 12/267 (4%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A K+ ++M G NC+ V ++ ++ A E +F ++ GI PD+V Y++++
Sbjct: 1070 AIKLHEKMKG-NCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGA-GILPDVVVYSSLM 1127
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
G L A EME +GI D+ T+N+L+ G G + + MV+
Sbjct: 1128 DGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFS 1187
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
P+ ++ +DGL E + +A +++ MR K PD+ T+ L+ G G LE+A +
Sbjct: 1188 PDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKL 1247
Query: 291 YNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAK 347
+ G +N + +L+ C+ +D AF + + ++ L +
Sbjct: 1248 FESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQ 1307
Query: 348 ELRVEEAKEL-VELG------KTNSYC 367
RV A++L VE+ K ++YC
Sbjct: 1308 SGRVRTAQKLFVEMQTCGQFLKLSTYC 1334
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 108/226 (47%), Gaps = 16/226 (7%)
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
K G EPD V+ T++K + + A L EM KKG+ D T+ L+ G +
Sbjct: 1009 KRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTG 1068
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
A K+ E M N + +V +Y +D L + T +AL++ EM I PDV + +L+
Sbjct: 1069 LAIKLHEKMKG-NCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLM 1127
Query: 276 KGFVNEGNLEEAKRWYNK-SGCGMNKAIFKL--LVPFVCEKG---DLDFAFNL-CKRTFS 328
G G L+EA ++ + G G++ ++ L+ + G ++ + NL R FS
Sbjct: 1128 DGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFS 1187
Query: 329 ERCLVDQAPLQLVVDRLAKELRVEEAKELVEL----GKTNSYCRYN 370
D +++D L KE +V EA++++EL GK YN
Sbjct: 1188 P----DAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYN 1229
>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 665
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 149/342 (43%), Gaps = 21/342 (6%)
Query: 39 RLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ---YKDISKEGFT 95
+L+D+ S D+ + T ++ L ++ + + E+L+ Q Q Y D+
Sbjct: 201 QLLDRMSVSPDVVTYNT-------ILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTI- 252
Query: 96 ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPH 155
LI K + A K+ DEM + C+ V+++N L+ + DE +P
Sbjct: 253 --LIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMP- 309
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
G +P+++++N I+++ G A L EM +KG ++TFN L+ G
Sbjct: 310 SYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIG 369
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
A + E M PN SYN L L +K+ ++A+E + M S+ PD+ T+ L+
Sbjct: 370 RAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLL 429
Query: 276 KGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCL 332
+G ++ A N+ GC + ++ + + G D A L +
Sbjct: 430 TALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLK 489
Query: 333 VDQAPLQLVVDRLAKELRVEEA----KELVELGKTNSYCRYN 370
D +V L++E +V+EA +L E+G + YN
Sbjct: 490 PDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYN 531
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 104/216 (48%), Gaps = 1/216 (0%)
Query: 78 EILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGAC 137
++LE Q+ L+ K E A + D M R C ++++N LL A
Sbjct: 373 DVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTAL 432
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLD 197
K D + L K G P L++YNT+I G D A LL EM+ KG++ D
Sbjct: 433 CKDGKVDVAVEILNQLGSK-GCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPD 491
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
+IT++TL+ G G+ +A + + M V+PN +YN+ + GL +QT +A++ +
Sbjct: 492 IITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLA 551
Query: 258 EMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK 293
M ++ P ++ LI+G EG +EA N+
Sbjct: 552 YMVARGCKPTETSYMILIEGLAYEGLAKEALELLNE 587
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 134/299 (44%), Gaps = 16/299 (5%)
Query: 66 RLANAKRFRWIEEILEHQKQY---KDISKEGFTARLIALYGKAAMFENARKVFDEMPGRN 122
RL A RF L H Y ++ R + G+ + +A K EM +
Sbjct: 297 RLDEAIRF------LNHMPSYGCQPNVITHNIILRSMCSTGR---WMDAEKFLAEMIRKG 347
Query: 123 CEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSA 182
C +V++FN L+ + + +P G P+ +SYN ++ A ++ A
Sbjct: 348 CSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQH-GCTPNSLSYNPLLHALCKDKKMERA 406
Query: 183 NTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDG 242
L M +G D++T+NTLL +G+ A +I + + P + +YN +DG
Sbjct: 407 IEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDG 466
Query: 243 LAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMN 299
L+ +T A++L+ EM+ K + PD+ T+ L+ G EG ++EA +++ + G N
Sbjct: 467 LSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPN 526
Query: 300 KAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
+ ++ +C+ A + + C + ++++ LA E +EA EL+
Sbjct: 527 AITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELL 585
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 126/292 (43%), Gaps = 44/292 (15%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSY 166
E K ++M R +++ +L+ G C K + + ++ G PD+++Y
Sbjct: 126 LEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVM--EILEDSGAVPDVITY 183
Query: 167 NTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVN 226
N +I + G + SA LL ++ + D++T+NT+L +G+ +A ++ + +
Sbjct: 184 NVLISGYCKTGEIGSALQLL---DRMSVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQ 240
Query: 227 MNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEE 286
P+V +Y ++ E +A++L+ EMR K PDV T+ LI G EG L+E
Sbjct: 241 RECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDE 300
Query: 287 AKRWYN--------------------------------------KSGCGMNKAIFKLLVP 308
A R+ N + GC + F +L+
Sbjct: 301 AIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILIN 360
Query: 309 FVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVEL 360
F+C KG + A ++ ++ C + ++ L K+ ++E A E +++
Sbjct: 361 FLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDI 412
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 123/260 (47%), Gaps = 21/260 (8%)
Query: 37 LKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRF-RWIE--EILEHQKQYKDISKEG 93
+ R +D +K G N+ Y + L K+ R IE +I+ + Y DI
Sbjct: 368 IGRAIDVLEKMPQHG-CTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVT-- 424
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
+ L AL K + A ++ +++ + C ++++N ++ K D+ L ++
Sbjct: 425 YNTLLTALC-KDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEM 483
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
K G++PD+++Y+T++ +G +D A +++E+ G++ + IT+N+++LG +
Sbjct: 484 KGK-GLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQ 542
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK----------- 262
A MV +P SY ++GLA E K+ALEL+ E+ S+
Sbjct: 543 TVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRGVVKKSSAEQV 602
Query: 263 --EINPDVFTFYALIKGFVN 280
+I +VF FY L+ N
Sbjct: 603 VVKIPFNVFYFYFLLHLLFN 622
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 102/218 (46%), Gaps = 10/218 (4%)
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
PD+++ ++I+ G A ++ +E G D+IT+N L+ G+ G A ++
Sbjct: 143 PDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLISGYCKTGEIGSALQL 202
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
+ M+V P+V +YN L L + K+A+E++ +E PDV T+ LI+
Sbjct: 203 LD---RMSVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCK 259
Query: 281 EGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAP 337
E + +A + ++ GC + + +L+ +C++G LD A S C +
Sbjct: 260 ESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVIT 319
Query: 338 LQLVVDRLAKELRVEEAK----ELVELGKTNSYCRYNL 371
+++ + R +A+ E++ G + S +N+
Sbjct: 320 HNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNI 357
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 88/194 (45%), Gaps = 6/194 (3%)
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
V N ++ V G L+ L +M +G D+I +L+ G G+ A ++ E
Sbjct: 111 VENNNHLRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEI 170
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
+ + P+V +YN + G + AL+L+ M ++PDV T+ +++ + G
Sbjct: 171 LEDSGAVPDVITYNVLISGYCKTGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGK 227
Query: 284 LEEAKRWYNKS---GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL 340
L+EA ++ C + + +L+ C++ + A L + C D +
Sbjct: 228 LKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNV 287
Query: 341 VVDRLAKELRVEEA 354
+++ + KE R++EA
Sbjct: 288 LINGICKEGRLDEA 301
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 64/149 (42%)
Query: 211 NGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
NG + K E MV P++ + + + GL +T KA ++ + PDV T
Sbjct: 123 NGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVIT 182
Query: 271 FYALIKGFVNEGNLEEAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSER 330
+ LI G+ G + A + ++ + + ++ +C+ G L A + R
Sbjct: 183 YNVLISGYCKTGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRE 242
Query: 331 CLVDQAPLQLVVDRLAKELRVEEAKELVE 359
C D ++++ KE V +A +L++
Sbjct: 243 CYPDVITYTILIEATCKESGVGQAMKLLD 271
>gi|15231886|ref|NP_188076.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274210|sp|Q9LUD6.1|PP230_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g14580, mitochondrial; Flags: Precursor
gi|9294380|dbj|BAB02390.1| unnamed protein product [Arabidopsis thaliana]
gi|119935972|gb|ABM06049.1| At3g14580 [Arabidopsis thaliana]
gi|332642020|gb|AEE75541.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 405
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 153/314 (48%), Gaps = 10/314 (3%)
Query: 40 LVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDIS-KEGFTARL 98
L+ ++ S ++ +Y + + AK + IEE++ K K E F L
Sbjct: 78 LLPAYQHYSKRKDYQPTESLYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNL 137
Query: 99 IALYGK-AAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+ +YG A A ++ MP C + SFN +L V++K FDE+ +F P KL
Sbjct: 138 MRIYGNLAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAP-KL 196
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+E D N +IK + G+L++A LL E ++ R +++TF+ L+ GF + G+F +A
Sbjct: 197 GVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEA 256
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
K+ E M + P+ ++N + GL + + ++ ++L+ M+ K P+ T+ ++ G
Sbjct: 257 FKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYG 316
Query: 278 FVNEG-NLEEAKRWYNKSGCGMNKAI--FKLLVPFVCEKG---DLDFAF-NLCKRTFSER 330
+++ NLE + GM + +K +V +CE ++D+ + F +
Sbjct: 317 LLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPK 376
Query: 331 CLVDQAPLQLVVDR 344
L+ +Q VV +
Sbjct: 377 TLMWWKVVQCVVSK 390
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 104/229 (45%), Gaps = 14/229 (6%)
Query: 68 ANAKRFRWIEEILEHQKQYKDISKEGFTAR-------------LIALYGKAAMFENARKV 114
++K F +I +L K + +I K +A LI ++ E A ++
Sbjct: 165 PSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQL 224
Query: 115 FDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFV 174
DE P + V++F+ L+ N KF+E L + + K IEPD +++N +I
Sbjct: 225 LDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERM-EKERIEPDTITFNILISGLR 283
Query: 175 DKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVR 234
KG ++ LL M+ KG + T+ +L G R +A+++ M++ +RP+
Sbjct: 284 KKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFL 343
Query: 235 SYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
SY + GL K + ++ +M + P ++ +++ V++ N
Sbjct: 344 SYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQCVVSKNN 392
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 73/183 (39%), Gaps = 32/183 (17%)
Query: 177 GSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSY 236
G ++ A +L+ M G +FN +L S F + KI+ + + V +
Sbjct: 146 GRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCL 205
Query: 237 NARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGC 296
N + GL + AL+L+ E ++ P+V TF LI+GF
Sbjct: 206 NILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGF------------------ 247
Query: 297 GMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKE 356
C KG + AF L +R ER D +++ L K+ RVEE +
Sbjct: 248 --------------CNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGID 293
Query: 357 LVE 359
L+E
Sbjct: 294 LLE 296
>gi|224118166|ref|XP_002317747.1| predicted protein [Populus trichocarpa]
gi|222858420|gb|EEE95967.1| predicted protein [Populus trichocarpa]
Length = 498
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 149/330 (45%), Gaps = 15/330 (4%)
Query: 53 FRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEG--FTARLIALYGKAAMFEN 110
F Y + +L+ A+ F +E +L + K G +I YG A
Sbjct: 45 FSHTYDTYHSIIDKLSRARAFDGVESLLSQLSRNSSHIKCGDDVFISVIRNYGLAGRPRL 104
Query: 111 ARKVFDEMPGR-NCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTI 169
A K F + + + +V N LL V +K++ V K+ K G+ P++ S+N +
Sbjct: 105 ALKTFTRIKEEFSMQPSVKLLNTLLNVFVQNKRYHLVGSTLKNCKDKYGVLPNVFSFNIL 164
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
IKA K +++A + EM G+ +L+T+ T+L GF S G +AEK++ + +
Sbjct: 165 IKALCKKNDVENALKVFDEMPTMGMIPNLVTYTTILGGFVSRGDLVNAEKVFSEISDKGW 224
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
P+ +Y + G + + A++++ M + P+ T+ +I + E EA+
Sbjct: 225 LPDATTYTVLMVGYCKQGRLSDAIKVMDNMEYNGVEPNEVTYGVMIDAYCKEKKSGEARN 284
Query: 290 WYNKSGCGMNKAIFKL------LVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVD 343
+ ++K ++ +CE G ++ A +L KR + CL D A + ++
Sbjct: 285 LIDDM---LDKKFLPSSTLCCKVIDVLCEDGKVENACHLWKRMLEKNCLPDNAIMSTLIH 341
Query: 344 RLAKELRVEEAKEL---VELGKTNSYCRYN 370
L KE +V EA++L E G S YN
Sbjct: 342 WLCKEGKVWEARKLFDEFEQGTIPSLMTYN 371
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 118/270 (43%), Gaps = 38/270 (14%)
Query: 127 VLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLL 186
V SFN L+ A + +F ++P +G+ P+LV+Y TI+ FV +G L +A +
Sbjct: 158 VFSFNILIKALCKKNDVENALKVFDEMP-TMGMIPNLVTYTTILGGFVSRGDLVNAEKVF 216
Query: 187 YEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIE 246
E+ KG D T+ L++G+ GR +DA K+ + M V PN +Y +D E
Sbjct: 217 SEISDKGWLPDATTYTVLMVGYCKQGRLSDAIKVMDNMEYNGVEPNEVTYGVMIDAYCKE 276
Query: 247 KQTKKALELVGEMRSK---------------------------------EIN--PDVFTF 271
K++ +A L+ +M K E N PD
Sbjct: 277 KKSGEARNLIDDMLDKKFLPSSTLCCKVIDVLCEDGKVENACHLWKRMLEKNCLPDNAIM 336
Query: 272 YALIKGFVNEGNLEEAKRWYNKSGCGMNKAI--FKLLVPFVCEKGDLDFAFNLCKRTFSE 329
LI EG + EA++ +++ G ++ + L+ +CE+G+L+ A L +
Sbjct: 337 STLIHWLCKEGKVWEARKLFDEFEQGTIPSLMTYNTLIAGMCERGELNEAGRLWDDMVEK 396
Query: 330 RCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
RC + +++ K V+E ++E
Sbjct: 397 RCRPNAFTYNMLIKGFMKAGVVKEGVRILE 426
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 131/300 (43%), Gaps = 24/300 (8%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLG---RFRTNTGIYTGTVQRLANAKRFRWIEEILEHQ 83
+I+ + K+N+++ + F + +G T T I G V R +++ +
Sbjct: 164 LIKALCKKNDVENALKVFDEMPTMGMIPNLVTYTTILGGFVSR----------GDLVNAE 213
Query: 84 KQYKDISKEGFTAR------LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGAC 137
K + +IS +G+ L+ Y K +A KV D M E +++ ++ A
Sbjct: 214 KVFSEISDKGWLPDATTYTVLMVGYCKQGRLSDAIKVMDNMEYNGVEPNEVTYGVMIDAY 273
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLD 197
KK E L D+ K + P +I + G +++A L M +K D
Sbjct: 274 CKEKKSGEARNLIDDMLDKKFL-PSSTLCCKVIDVLCEDGKVENACHLWKRMLEKNCLPD 332
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
+TL+ G+ +A K+++ + P++ +YN + G+ + +A L
Sbjct: 333 NAIMSTLIHWLCKEGKVWEARKLFDEFEQGTI-PSLMTYNTLIAGMCERGELNEAGRLWD 391
Query: 258 EMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKG 314
+M K P+ FT+ LIKGF+ G ++E R + +GC NK+ + LL+ + E G
Sbjct: 392 DMVEKRCRPNAFTYNMLIKGFMKAGVVKEGVRILEEMLDNGCLPNKSTYTLLIEGLQESG 451
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 58/132 (43%), Gaps = 2/132 (1%)
Query: 89 ISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDG 148
+ + LI K ARK+FDE + +++++N L+ + +E
Sbjct: 330 LPDNAIMSTLIHWLCKEGKVWEARKLFDEFE-QGTIPSLMTYNTLIAGMCERGELNEAGR 388
Query: 149 LFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
L+ D+ K P+ +YN +IK F+ G + +L EM G + T+ L+ G
Sbjct: 389 LWDDMVEK-RCRPNAFTYNMLIKGFMKAGVVKEGVRILEEMLDNGCLPNKSTYTLLIEGL 447
Query: 209 YSNGRFADAEKI 220
+G D +K+
Sbjct: 448 QESGMEGDVDKV 459
>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Glycine max]
Length = 1113
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 146/327 (44%), Gaps = 14/327 (4%)
Query: 41 VDKFKKSSDLGRFR---TNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTAR 97
VD+ D+ R R N Y + L N +R E+ + +
Sbjct: 383 VDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVL 442
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
I YGK E A F++M R ++ + NA L + + E +F D+ H
Sbjct: 443 FIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDI-HNC 501
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ PD V+YN ++K + G +D A LL EM +G D+I N+L+ Y GR +A
Sbjct: 502 GLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEA 561
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+++ + ++ + P V +YN + GL E + KAL+L G M+ P+ TF AL+
Sbjct: 562 WQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDC 621
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAF---NLCKRTFSERC 331
++ A + + + C + + ++ + ++G +AF + K+ S
Sbjct: 622 LCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMKKFLSP-- 679
Query: 332 LVDQAPLQLVVDRLAKELRVEEAKELV 358
D L ++ + K+ RVE+A ++V
Sbjct: 680 --DHVTLYTLLPGVVKDGRVEDAIKIV 704
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 121/237 (51%), Gaps = 4/237 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I+ K+ A ++ E+ + T ++ L+G + + + +E +F+++P
Sbjct: 864 IISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMP-DY 922
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
+P+ YN +I F G+++ A L M K+GIR DL ++ L+ + GR DA
Sbjct: 923 QCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDA 982
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+E + + P+ SYN ++GL ++ ++AL L EM+++ I+P+++T+ ALI
Sbjct: 983 VHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILH 1042
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERC 331
F N G +++A + + + G N + L+ + G+ D AF++ K+ C
Sbjct: 1043 FGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGC 1099
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 149/324 (45%), Gaps = 11/324 (3%)
Query: 40 LVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRF---RWIEEILEHQKQYKDISKEGFTA 96
++D ++ LG R N YT ++ L A R I + +E + D+ +T
Sbjct: 246 IMDLLEEMETLG-LRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVT--YTV 302
Query: 97 RLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHK 156
+ AL A + A++++ +M + + ++++ L+ N + V + ++
Sbjct: 303 LIDALCA-AGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEAD 361
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
G PD+V+Y +++A G +D A +L M +GI +L T+NTL+ G + R +
Sbjct: 362 -GYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDE 420
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
A +++ M ++ V P SY +D +KAL+ +M+ + I P + A +
Sbjct: 421 ALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLY 480
Query: 277 GFVNEGNLEEAKRWYNK-SGCGM--NKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV 333
G + EAK +N CG+ + + +++ + G +D A L SE C
Sbjct: 481 SLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEP 540
Query: 334 DQAPLQLVVDRLAKELRVEEAKEL 357
D + ++D L K RV+EA ++
Sbjct: 541 DIIVVNSLIDTLYKAGRVDEAWQM 564
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 91/183 (49%), Gaps = 1/183 (0%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
E A K+F EM C + ++N LL A SK+ DE+ L+ ++ + G +P+++++N
Sbjct: 805 EAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCR-GCKPNIITHNI 863
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
II A V S++ A L YE+ T+ L+ G GR +A KI+E M +
Sbjct: 864 IISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQ 923
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
+PN YN ++G A +L M + I PD+ ++ L++ G +++A
Sbjct: 924 CKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAV 983
Query: 289 RWY 291
++
Sbjct: 984 HYF 986
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 126/287 (43%), Gaps = 12/287 (4%)
Query: 81 EHQKQYKDISKEG-------FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNAL 133
E K YK + EG ++A ++AL G+ + +EM + ++
Sbjct: 210 EALKVYKRMISEGLKPSMKTYSALMVAL-GRRRDTGTIMDLLEEMETLGLRPNIYTYTIC 268
Query: 134 LGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKG 193
+ + + D+ G+ K + + G PD+V+Y +I A G LD A L +M
Sbjct: 269 IRVLGRAGRIDDAYGILKTMEDE-GCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASS 327
Query: 194 IRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKAL 253
+ DL+T+ TL+ F + G ++ W M P+V +Y ++ L + +A
Sbjct: 328 HKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAF 387
Query: 254 ELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS---GCGMNKAIFKLLVPFV 310
+++ MR + I P++ T+ LI G +N L+EA +N G + L + +
Sbjct: 388 DMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYY 447
Query: 311 CEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
+ GD + A + ++ + A + LA+ R+ EAK++
Sbjct: 448 GKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDI 494
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 111/249 (44%), Gaps = 4/249 (1%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
+I + K N++ + +D + + G F Y + L A R +I E Y
Sbjct: 864 IISALVKSNSINKALDLYYEIIS-GDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDY 922
Query: 87 KDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEV 146
+ LI +GKA A +F M + S+ L+ + + D+
Sbjct: 923 QCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDA 982
Query: 147 DGLFKDLPHKL-GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
F++L KL G++PD VSYN +I L+ A +L EM+ +GI +L T+N L+
Sbjct: 983 VHYFEEL--KLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALI 1040
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEIN 265
L F + G A K++E + M + PNV +YNA + G + +A + +M +
Sbjct: 1041 LHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCS 1100
Query: 266 PDVFTFYAL 274
P+ TF L
Sbjct: 1101 PNAGTFAQL 1109
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 101/222 (45%), Gaps = 3/222 (1%)
Query: 141 KKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLIT 200
KK + LF LG P SYN ++ + ++A L EM+ G ++ T
Sbjct: 766 KKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFT 825
Query: 201 FNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMR 260
+N LL + R + +++ M+ +PN+ ++N + L KAL+L E+
Sbjct: 826 YNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEII 885
Query: 261 SKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSG---CGMNKAIFKLLVPFVCEKGDLD 317
S + +P T+ LI G + G EEA + + + C N AI+ +L+ + G+++
Sbjct: 886 SGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVN 945
Query: 318 FAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
A +L KR E D ++V+ L RV++A E
Sbjct: 946 IACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFE 987
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 87/171 (50%), Gaps = 3/171 (1%)
Query: 152 DLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSN 211
DL K I + +Y TI KA KG + A L +M + G L+ ++N L+
Sbjct: 146 DLMQKQVINRNPNTYLTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLLQP 205
Query: 212 GRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTF 271
G +A K+++ M++ ++P++++Y+A + L + T ++L+ EM + + P+++T+
Sbjct: 206 GFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTY 265
Query: 272 YALIKGFVNEGNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFA 319
I+ G +++A + GCG + + +L+ +C G LD A
Sbjct: 266 TICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKA 316
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 94/234 (40%), Gaps = 44/234 (18%)
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW--- 221
SYN +I + G A + M +G++ + T++ L++ GR D I
Sbjct: 194 SYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVAL---GRRRDTGTIMDLL 250
Query: 222 ETMVNMNVRPN-----------------------------------VRSYNARLDGLAIE 246
E M + +RPN V +Y +D L
Sbjct: 251 EEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAA 310
Query: 247 KQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIF 303
+ KA EL +MR+ PD+ T+ L+ F N G+LE KR++++ G + +
Sbjct: 311 GKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTY 370
Query: 304 KLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
+LV +C+ G +D AF++ + + ++ L R++EA EL
Sbjct: 371 TILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALEL 424
>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 126/265 (47%), Gaps = 4/265 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+IAL +A +V ++M + F ++ + LF+++ K
Sbjct: 328 VIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEM-QKR 386
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ D V++ +I G L A+ +L EM KG+ +D++T+ L+ G+ G +A
Sbjct: 387 GLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEA 446
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ MV V PNV +Y A DGL + + A EL+ EM +K + +V+T+ +LI G
Sbjct: 447 FRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLING 506
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
GNLE+A R + +G + + L+ +C+ G+ D A N+ + +
Sbjct: 507 LCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPS 566
Query: 335 QAPLQLVVDRLAKELRVEEAKELVE 359
A ++++ RVE K+L+E
Sbjct: 567 IATYNVLMNGFCMSGRVEGGKKLLE 591
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 94/183 (51%), Gaps = 1/183 (0%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A ++ EM + E V ++N+L+ ++ + ++ G D+ +Y T+I
Sbjct: 481 ANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEM-EAAGHRTDVYTYTTLI 539
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
G D A+ +L EM KGI+ + T+N L+ GF +GR +K+ E M+ NVR
Sbjct: 540 DTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVR 599
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
PNV +YN+ + I+K K E+ M S+E+ P+ T+ LIKG N++EA +
Sbjct: 600 PNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYF 659
Query: 291 YNK 293
+ +
Sbjct: 660 HQE 662
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 112/222 (50%), Gaps = 9/222 (4%)
Query: 105 AAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
A ++A + FDEM + V+++ ++ G CV + + V L ++ K G+E +
Sbjct: 268 AGRLKDACQHFDEM---SSPPDVVTYGTMVHGYCVRGELENAVK-LLDEMAAK-GLESNA 322
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
Y ++I +KG + A +L +M G+ LD + F T++ GF S G A A +++E
Sbjct: 323 TVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEE 382
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M + + ++ A ++GL + K+A ++ EM K ++ DV T+ LI G+ GN
Sbjct: 383 MQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGN 442
Query: 284 LEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
+ EA R +N+ N + L +C++GD+ A L
Sbjct: 443 MVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANEL 484
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 130/303 (42%), Gaps = 11/303 (3%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDL--GRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQK 84
+I G K N+ V+ F+ +++ R N YT L R E+L H+
Sbjct: 433 LIDGYCKRGNM---VEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELL-HEM 488
Query: 85 QYKDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKF 143
K + +T LI K E A ++ EM V ++ L+ S +F
Sbjct: 489 CNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEF 548
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT 203
D + +++ K GI+P + +YN ++ F G ++ LL M +K +R +++T+N+
Sbjct: 549 DRAHNMLQEMLDK-GIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNS 607
Query: 204 LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
L+ + + +I++ M + V PN +YN + G + K+AL EM K
Sbjct: 608 LMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKG 667
Query: 264 INPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAF 320
+ ++ ALI+ + EA+ +++K G ++ + + +L+
Sbjct: 668 LRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSFYMDISFNEDNLESTI 727
Query: 321 NLC 323
LC
Sbjct: 728 TLC 730
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 105/261 (40%), Gaps = 39/261 (14%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
S+I G+ K NL++ + + G RT+ YT + L + F +L+
Sbjct: 502 SLINGLCKFGNLEQAMRIMTEMEAAGH-RTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLD 560
Query: 86 YKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
K I T L+ + + E +K+ + M +N V+++N+L+ K
Sbjct: 561 -KGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMK 619
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
++K + H + P+ +YN +IK ++ A EM +KG+RL +++ L
Sbjct: 620 STTEIYKGM-HSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSAL 678
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+ +F++A ++ M N +GL E
Sbjct: 679 IRLLNKKKKFSEARVFFDKMRN--------------EGLTAE------------------ 706
Query: 265 NPDVFTFYALIKGFVNEGNLE 285
PDV++FY I NE NLE
Sbjct: 707 -PDVYSFYMDIS--FNEDNLE 724
>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
Length = 747
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 127/266 (47%), Gaps = 4/266 (1%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I+G KE N + + + G + YT + + A E L+ +
Sbjct: 315 TLIKGYCKEGNFHQALVMHAEMLRHG-LSPSVITYTSLIHSMCKAGNMNRATEFLDQMRV 373
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFD 144
E L+ + + A +V EM +V+++NAL+ G C+ K D
Sbjct: 374 RGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVD 433
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
+ + +D+ K G+ PD+VSY+T++ F +D A + +M KGI+ D IT+++L
Sbjct: 434 AI-AVLEDMKEK-GLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSL 491
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+ GF R +A +++ M+ + + P+ +Y A ++ +E +KA++L EM K +
Sbjct: 492 IQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGV 551
Query: 265 NPDVFTFYALIKGFVNEGNLEEAKRW 290
PDV T+ LI G + EAKR
Sbjct: 552 LPDVVTYSVLINGLNKQARTREAKRL 577
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 109/214 (50%), Gaps = 7/214 (3%)
Query: 77 EEILEHQKQYKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLG 135
+E+L+ Q +S FT LI + A + A + FD M + C V+++N L+
Sbjct: 194 KEMLQSQ-----VSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLID 248
Query: 136 ACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIR 195
+K D+ L + + K G+EP+L+SYN +I +G + + +L EM K+G
Sbjct: 249 GYCKLRKIDDGFELLRSMALK-GLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYS 307
Query: 196 LDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALEL 255
LD +T+NTL+ G+ G F A + M+ + P+V +Y + + + +A E
Sbjct: 308 LDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEF 367
Query: 256 VGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
+ +MR + + P+ T+ L+ GF +G + EA R
Sbjct: 368 LDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYR 401
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 137/280 (48%), Gaps = 15/280 (5%)
Query: 99 IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKK-FDEVDGLFKDLPHKL 157
+ L KA + + MPG VLS+NA+L A + SK+ + +FK++
Sbjct: 147 LCLIDKALSIVHLSQAHGFMPG------VLSYNAVLDATIRSKRNISFAENVFKEMLQS- 199
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
+ P++ +YN +I+ F G+LD A MEKKG +++T+NTL+ G+ + D
Sbjct: 200 QVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDG 259
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ +M + PN+ SYN ++GL E + K+ ++ EM + + D T+ LIKG
Sbjct: 260 FELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKG 319
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
+ EGN +A + + G + + L+ +C+ G+++ A + +
Sbjct: 320 YCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPN 379
Query: 335 QAPLQLVVDRLAKELRVEEA----KELVELGKTNSYCRYN 370
+ +VD +++ + EA KE+++ G + S YN
Sbjct: 380 ERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYN 419
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 136/299 (45%), Gaps = 48/299 (16%)
Query: 37 LKRLVDKFK--KSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGF 94
L+++ D F+ +S L N Y + L R + I +L +++K G+
Sbjct: 253 LRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVL------TEMNKRGY 306
Query: 95 TA------RLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-------------- 134
+ LI Y K F A + EM +V+++ +L+
Sbjct: 307 SLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATE 366
Query: 135 --------GACVNSKKFDE-VDGL---------FKDLPHKL--GIEPDLVSYNTIIKAFV 174
G C N + + VDG ++ L + G P +V+YN +I
Sbjct: 367 FLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHC 426
Query: 175 DKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVR 234
G + A +L +M++KG+ D+++++T+L GF + +A ++ MV ++P+
Sbjct: 427 IAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTI 486
Query: 235 SYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK 293
+Y++ + G +++TK+A +L EM + PD FT+ ALI + EG+L++A + +N+
Sbjct: 487 TYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNE 545
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/354 (22%), Positives = 159/354 (44%), Gaps = 26/354 (7%)
Query: 26 SVIRGIYKENNLKR---LVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEH 82
S+I + K N+ R +D+ + RT T + G Q+ + +R ++E++++
Sbjct: 350 SLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDN 409
Query: 83 QKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKK 142
++ LI + A +A V ++M + V+S++ +L S
Sbjct: 410 GFSPSVVTYNA----LINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYD 465
Query: 143 FDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFN 202
DE + + + K GI+PD ++Y+++I+ F ++ A L EM + G+ D T+
Sbjct: 466 VDEALRVKRKMVAK-GIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYT 524
Query: 203 TLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
L+ + G A ++ MV V P+V +Y+ ++GL + +T++A L+ ++ +
Sbjct: 525 ALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYE 584
Query: 263 EINPDVFTFY---------------ALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFK 304
E P T++ +LIKGF +G + EA + + + + +
Sbjct: 585 ESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYN 644
Query: 305 LLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
+++ C GD+ A++L K L+ + +V L KE +V E ++
Sbjct: 645 VMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIALVKTLHKEGKVNELNSVI 698
>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
Length = 554
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 139/299 (46%), Gaps = 9/299 (3%)
Query: 35 NNLKRLVDKFKKSSDLGRFRTN---TGIYTGTV--QRLANAKRFRWIEEILEHQKQYKDI 89
+ L R D S G++ N G YT ++ L + EE+L+ +
Sbjct: 176 DGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLV 235
Query: 90 SKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGL 149
LI Y + E A F +M R+ + +++NAL+ +++ L
Sbjct: 236 PTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDL 295
Query: 150 FKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFY 209
++ G+ P + ++NT+I A+ G L+ +L EM++ G++ +++++ +++ F
Sbjct: 296 LMEMQDN-GVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFC 354
Query: 210 SNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVF 269
NG+ +A I + M + +V PN + YNA +D +A LV +M+S I+P +
Sbjct: 355 KNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIV 414
Query: 270 TFYALIKGFVNEGNLEEAKRWYNKSGCGM---NKAIFKLLVPFVCEKGDLDFAFNLCKR 325
T+ LIKG N+ + EA+ N + + L+ C +G++D A +L +R
Sbjct: 415 TYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQR 473
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 109/235 (46%), Gaps = 3/235 (1%)
Query: 60 YTGTVQRLANAKRFRWIEEIL-EHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEM 118
Y + L A+R +++L E Q + + E F LI YG+ E V EM
Sbjct: 276 YNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNT-LIDAYGRTGQLEKCFIVLSEM 334
Query: 119 PGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGS 178
+ V+S+ +++ A + K E + D+ HK + P+ YN II A+V+ G
Sbjct: 335 QENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHK-DVLPNAQVYNAIIDAYVEHGP 393
Query: 179 LDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNA 238
D A L+ +M+ GI ++T+N L+ G + + ++AE+I ++ N + P+ SYN
Sbjct: 394 NDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNT 453
Query: 239 RLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK 293
+ KAL+L M I V T++ LI G G L E + Y K
Sbjct: 454 LISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQK 508
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 94/204 (46%), Gaps = 3/204 (1%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ P V YNT+I + G L+ A + +M+ + I+ D IT+N L+ G R +A
Sbjct: 233 GLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNA 292
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ + M + V P V ++N +D Q +K ++ EM+ + P+V ++ +++
Sbjct: 293 QDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNA 352
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
F G + EA + N ++ ++ E G D AF L ++ S
Sbjct: 353 FCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPS 412
Query: 335 QAPLQLVVDRLAKELRVEEAKELV 358
L++ L + ++ EA+E++
Sbjct: 413 IVTYNLLIKGLCNQSQISEAEEII 436
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 108/233 (46%), Gaps = 4/233 (1%)
Query: 129 SFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
S+N ++ + + + +F ++ + + P+ ++YNT+I + G L++ L +
Sbjct: 65 SYNVVIAGMWRAGRGGDAVEVFDEMTER-AVLPNHITYNTMIDGHIKGGDLEAGFRLRDQ 123
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
M G++ + IT+N LL G GR + + + M + + P+ +Y+ DGL+
Sbjct: 124 MVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGD 183
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL---EEAKRWYNKSGCGMNKAIFKL 305
+K L L G+ + +T L+ G +G + EE + +G + I+
Sbjct: 184 SKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNT 243
Query: 306 LVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
L+ C+ G+L+ AF+ + S D +++ L K R+ A++L+
Sbjct: 244 LINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLL 296
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 3/171 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLP-HK 156
+I Y + + A + ++M +++++N L+ N + E + + L H+
Sbjct: 384 IIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHR 443
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
L PD VSYNT+I A +G++D A L M K GI+ + T++ L+ G GR +
Sbjct: 444 L--IPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNE 501
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPD 267
E +++ M+ NV P+ +N ++ + KA +L EM K N D
Sbjct: 502 MEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKRNNHD 552
>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 757
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 110/205 (53%), Gaps = 9/205 (4%)
Query: 126 TVLSFNALLGACV-----NSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLD 180
TVLS+NA+L A + N + +D+ + +F+D+ G+ P++ +YN II+ V +G L+
Sbjct: 166 TVLSYNAVLDALLRRSSSNHRDYDDAERVFRDMVRN-GVSPNVYTYNVIIRGVVSQGDLE 224
Query: 181 SANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARL 240
+ +MEK+GI +++T+NTL+ + +A + M V N+ SYN+ +
Sbjct: 225 KGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVI 284
Query: 241 DGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCG 297
+GL + + + ELV EMR K + PD T+ L+ GF EGNL + ++ G
Sbjct: 285 NGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLS 344
Query: 298 MNKAIFKLLVPFVCEKGDLDFAFNL 322
N + L+ +C+ G+L A +
Sbjct: 345 PNVVTYTTLINCMCKAGNLSRAVEI 369
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 116/234 (49%), Gaps = 4/234 (1%)
Query: 127 VLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLL 186
++S+N+++ + EV L +++ K G+ PD V+YNT++ F +G+L LL
Sbjct: 277 LISYNSVINGLCGKGRMSEVGELVEEMRGK-GLVPDEVTYNTLVNGFCKEGNLHQGLVLL 335
Query: 187 YEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIE 246
EM KG+ +++T+ TL+ G + A +I++ M +RPN R+Y +DG +
Sbjct: 336 SEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQK 395
Query: 247 KQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK---RWYNKSGCGMNKAIF 303
+A +++ EM +P V T+ AL+ G+ G ++EA R + G + +
Sbjct: 396 GLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSY 455
Query: 304 KLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
++ C + +L AF + + + L D ++ L + ++ EA +L
Sbjct: 456 STVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDL 509
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 118/265 (44%), Gaps = 2/265 (0%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
+++ G KE NL + + + G N YT + + A EI + +
Sbjct: 317 TLVNGFCKEGNLHQGLVLLSEMVGKG-LSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRV 375
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
E LI + + + A KV EM +V+++NAL+ + E
Sbjct: 376 RGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQE 435
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
G+ + + + G+ PD+VSY+T+I F + L A + EM +KG+ D +T+++L+
Sbjct: 436 AVGILRGMVER-GLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLI 494
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEIN 265
G + +A ++ M+ + P+ +Y + ++ ++ + KAL L EM +
Sbjct: 495 QGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFL 554
Query: 266 PDVFTFYALIKGFVNEGNLEEAKRW 290
PD T+ LI G + + AKR
Sbjct: 555 PDNVTYSVLINGLNKKARTKVAKRL 579
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 88/191 (46%), Gaps = 8/191 (4%)
Query: 166 YNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFY----SNGR-FADAEKI 220
++ ++K+ G + A TLL+ + G ++++N +L SN R + DAE++
Sbjct: 135 FDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERV 194
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
+ MV V PNV +YN + G+ + +K L + +M + I+P+V T+ LI
Sbjct: 195 FRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCK 254
Query: 281 EGNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAP 337
+ ++EA R G N + ++ +C KG + L + + + D+
Sbjct: 255 KKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVT 314
Query: 338 LQLVVDRLAKE 348
+V+ KE
Sbjct: 315 YNTLVNGFCKE 325
>gi|413950074|gb|AFW82723.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 643
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 119/262 (45%), Gaps = 9/262 (3%)
Query: 96 ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPH 155
A ++++ K + A +V MP S+NA++ A + EV + D+
Sbjct: 198 ATIVSVLCKLDRLDEATEVLAAMP-----PVAASYNAIVLALCREFRMQEVFSVVSDMVG 252
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
+ G++P++++Y TI+ AF G L A +L M G +++TF L+ G + +GR
Sbjct: 253 R-GLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVH 311
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
DA +W MV P+ SYN + GL K A ++ M P+V T+ LI
Sbjct: 312 DALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLI 371
Query: 276 KGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCL 332
GF G+L A +N +SGC N ++ +V C+K + A +L + E C
Sbjct: 372 DGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCP 431
Query: 333 VDQAPLQLVVDRLAKELRVEEA 354
+ ++ L RV A
Sbjct: 432 PNTVTFNTLIRSLCDCRRVGRA 453
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 145/320 (45%), Gaps = 17/320 (5%)
Query: 8 LSCSFSTTATATG--PKFIG--SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGT 63
++C+ TG P + +++RG++ + + +D ++ G + +T Y
Sbjct: 277 MACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEG-WAPSTVSYNIL 335
Query: 64 VQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNC 123
++ L + + IL +Q+ + LI + KA A ++++M C
Sbjct: 336 IRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGC 395
Query: 124 EQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIE---PDLVSYNTIIKAFVDKGSLD 180
+ V+ + ++ F++ K L K+ +E P+ V++NT+I++ D +
Sbjct: 396 KPNVVVYTNMVDVFCKKLMFNQA----KSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVG 451
Query: 181 SANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARL 240
A + +EM + G + T+N L+ G + G DA + M + + ++ +YN +
Sbjct: 452 RALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVV 511
Query: 241 DGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW----YNKSGC 296
GL + +++A+ VG+M + I P+ FTF A+I + EG + A W N C
Sbjct: 512 SGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAA-WMLGAMNVVNC 570
Query: 297 GMNKAIFKLLVPFVCEKGDL 316
N ++ +L+ +C + L
Sbjct: 571 HRNILVYTILMAELCNQDKL 590
>gi|302758668|ref|XP_002962757.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
gi|300169618|gb|EFJ36220.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
Length = 439
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 121/251 (48%), Gaps = 7/251 (2%)
Query: 74 RWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNAL 133
+ +E E +K + + + +I Y K + AR++ +E C V++ ++
Sbjct: 88 KALELFHEMEKNFALVPEATTYTAIIKCYCKMDRLDQARQLLEE--SSCCSSDVIAITSV 145
Query: 134 LGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKG 193
+++ DE L D+ K +PD+V++N II F G + A +L + G
Sbjct: 146 ARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMG 205
Query: 194 IRLDLITFNTLLLGFYSNGRFADAEKIWETMV--NMNVRPNVRSYNARLDGLAIEKQTKK 251
+ +T+ TL+ GF +G ++A ++++ + + + PNV ++NA + GL + +
Sbjct: 206 CVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEH 265
Query: 252 ALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVP 308
A ELV +M+++++ D FT+ L+ G +G E R + + GC + + LV
Sbjct: 266 AFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVH 325
Query: 309 FVCEKGDLDFA 319
C+ G L A
Sbjct: 326 AHCKAGSLQDA 336
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 113/259 (43%), Gaps = 4/259 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHK- 156
+I + KA A ++ + + C +++ L+ S E LFK L +
Sbjct: 181 IIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRD 240
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
EP++V++N +I L+ A L+ +M+ + +R D T+ TL+ G GR ++
Sbjct: 241 HHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSE 300
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
+++E M+ P+V +Y + + A +++ M +K I PDV T+ L++
Sbjct: 301 VSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLE 360
Query: 277 GFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV 333
G G + A ++ K C ++ LV C+ +D A R
Sbjct: 361 GLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAP 420
Query: 334 DQAPLQLVVDRLAKELRVE 352
D A +L+V+ L K R +
Sbjct: 421 DPATCKLLVEMLCKRGRTD 439
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 121/302 (40%), Gaps = 44/302 (14%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LIA KA A + +++M R+C + N LL + + D+ +F+ +
Sbjct: 9 LIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAIFRGIQ--- 65
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEK-------------------KGIRL-- 196
P +++ N +I F + LD A L +EMEK K RL
Sbjct: 66 -CSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRLDQ 124
Query: 197 -------------DLITFNTLLLGFYSNGRFADAEKIWETMVN-MNVRPNVRSYNARLDG 242
D+I ++ GF R +A ++ MV + +P++ ++N + G
Sbjct: 125 ARQLLEESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHG 184
Query: 243 LAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN-----KSGCG 297
+ ++A E++ + S P+ T+ LI GF GNL EA + +
Sbjct: 185 FCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAE 244
Query: 298 MNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
N F L+ +C+ L+ AF L K+ + D ++D L K+ R E +
Sbjct: 245 PNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRV 304
Query: 358 VE 359
E
Sbjct: 305 FE 306
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 69/167 (41%), Gaps = 17/167 (10%)
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
TF+ L+ G GR +A + + M+ + PN+R N L L +A+ +
Sbjct: 5 TFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAI---F 61
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNK--------AIFKLLVPFVC 311
R + +P V T LI GF L++A +++ M K + ++ C
Sbjct: 62 RGIQCSPSVITLNILINGFCELQLLDKALELFHE----MEKNFALVPEATTYTAIIKCYC 117
Query: 312 EKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
+ LD A L + S C D + V K RV+EA +L+
Sbjct: 118 KMDRLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLL 162
>gi|224072823|ref|XP_002303899.1| predicted protein [Populus trichocarpa]
gi|222841331|gb|EEE78878.1| predicted protein [Populus trichocarpa]
Length = 427
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 144/294 (48%), Gaps = 4/294 (1%)
Query: 53 FRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENAR 112
F+ + Y + +LA + F +EE+L + + +E L YGKA + A
Sbjct: 59 FKPDYPSYAALLYKLARCQDFGAVEEVLRYVEDKNVHCQETIFIALFQHYGKAQLVHKAV 118
Query: 113 KVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKA 172
++F+ M NC +T S N+LL V++ F E + LF D +++G + V++N +IK
Sbjct: 119 ELFNRMTRFNCVRTSQSLNSLLNVLVDNGWFLEANELF-DKGYEMGFRLNSVAFNVMIKG 177
Query: 173 FVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPN 232
+++KG + A+ + EM ++ + ++T+N+L+ NG A+ + E M+ RPN
Sbjct: 178 WLEKGEWEQASKVFDEMLERKVEPSVVTYNSLIGYLCRNGELDKAKGLLEDMIKKGKRPN 237
Query: 233 VRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN 292
++ ++G + + +A +++ +M + P V F L+ G ++EAK +
Sbjct: 238 AITFALLMEGSCLIGEHNEAKKMMFDMEYRGCKPTVVNFGVLMSDLGKRGKIDEAKSVLH 297
Query: 293 ---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVD 343
K + + +L+ ++C++G A+ + C + A +++VD
Sbjct: 298 EMKKRHMKPDVVTYNILINYLCKEGRAADAYEVLFEMQVGGCEANAATYRMLVD 351
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 101/214 (47%), Gaps = 34/214 (15%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL------PHKL---- 157
+E A KVFDEM R E +V+++N+L+G + + D+ GL +D+ P+ +
Sbjct: 184 WEQASKVFDEMLERKVEPSVVTYNSLIGYLCRNGELDKAKGLLEDMIKKGKRPNAITFAL 243
Query: 158 ------------------------GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKG 193
G +P +V++ ++ +G +D A ++L+EM+K+
Sbjct: 244 LMEGSCLIGEHNEAKKMMFDMEYRGCKPTVVNFGVLMSDLGKRGKIDEAKSVLHEMKKRH 303
Query: 194 IRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKAL 253
++ D++T+N L+ GR ADA ++ M N +Y +DG + L
Sbjct: 304 MKPDVVTYNILINYLCKEGRAADAYEVLFEMQVGGCEANAATYRMLVDGFCRVGDFEGGL 363
Query: 254 ELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+++ M + P V TF +L+ G V GNL+ A
Sbjct: 364 KVLNAMLTSGHFPRVETFRSLVVGLVKSGNLDGA 397
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 73/154 (47%), Gaps = 1/154 (0%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A+K+ +M R C+ TV++F L+ K DE + ++ K ++PD+V+YN +I
Sbjct: 257 AKKMMFDMEYRGCKPTVVNFGVLMSDLGKRGKIDEAKSVLHEMK-KRHMKPDVVTYNILI 315
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
+G A +L+EM+ G + T+ L+ GF G F K+ M+
Sbjct: 316 NYLCKEGRAADAYEVLFEMQVGGCEANAATYRMLVDGFCRVGDFEGGLKVLNAMLTSGHF 375
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
P V ++ + + GL A ++ EM +++
Sbjct: 376 PRVETFRSLVVGLVKSGNLDGACFVLEEMEKRQM 409
>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04760, chloroplastic; Flags: Precursor
gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 141/300 (47%), Gaps = 8/300 (2%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
+I+G + N+ + V + G+ + Y + R +L+ +
Sbjct: 130 LIKGFFTLRNIPKAVRVMEILEKFGQ--PDVFAYNALINGFCKMNRIDDATRVLDRMRS- 186
Query: 87 KDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
KD S + T +I + A KV +++ NC+ TV+++ L+ A + DE
Sbjct: 187 KDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDE 246
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
L ++ + G++PD+ +YNTII+ +G +D A ++ +E KG D+I++N LL
Sbjct: 247 ALKLMDEMLSR-GLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILL 305
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEIN 265
+ G++ + EK+ M + PNV +Y+ + L + + ++A+ L+ M+ K +
Sbjct: 306 RALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLT 365
Query: 266 PDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
PD +++ LI F EG L+ A + GC + + ++ +C+ G D A +
Sbjct: 366 PDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEI 425
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 105/206 (50%), Gaps = 3/206 (1%)
Query: 160 EPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEK 219
+PD+ +YN +I F +D A +L M K D +T+N ++ S G+ A K
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214
Query: 220 IWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFV 279
+ +++ N +P V +Y ++ +E +AL+L+ EM S+ + PD+FT+ +I+G
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274
Query: 280 NEGNLE---EAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQA 336
EG ++ E R GC + + +L+ + +G + L + FSE+C +
Sbjct: 275 KEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334
Query: 337 PLQLVVDRLAKELRVEEAKELVELGK 362
+++ L ++ ++EEA L++L K
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMK 360
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 127/276 (46%), Gaps = 10/276 (3%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
+E K+ +M C+ V++++ L+ K +E L K + K G+ PD SY+
Sbjct: 314 WEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEK-GLTPDAYSYD 372
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
+I AF +G LD A L M G D++ +NT+L NG+ A +I+ + +
Sbjct: 373 PLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEV 432
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
PN SYN L +AL ++ EM S I+PD T+ ++I EG ++EA
Sbjct: 433 GCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEA 492
Query: 288 -KRWYNKSGCGMNKAI--FKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDR 344
+ + C + ++ + +++ C+ ++ A N+ + C ++ ++++
Sbjct: 493 FELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEG 552
Query: 345 LA----KELRVEEAKELVELGKTNSYC--RYNLKFP 374
+ + +E A +LV + + Y R + FP
Sbjct: 553 IGFAGYRAEAMELANDLVRIDAISEYSFKRLHRTFP 588
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 117/262 (44%), Gaps = 8/262 (3%)
Query: 104 KAAMFEN----ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGI 159
+A M E A K+ DEM R + + ++N ++ D + ++L K G
Sbjct: 236 EATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELK-GC 294
Query: 160 EPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEK 219
EPD++SYN +++A +++G + L+ +M + +++T++ L+ +G+ +A
Sbjct: 295 EPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMN 354
Query: 220 IWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFV 279
+ + M + P+ SY+ + E + A+E + M S PD+ + ++
Sbjct: 355 LLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLC 414
Query: 280 NEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQA 336
G ++A + K GC N + + + + GD A ++ S D+
Sbjct: 415 KNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEI 474
Query: 337 PLQLVVDRLAKELRVEEAKELV 358
++ L +E V+EA EL+
Sbjct: 475 TYNSMISCLCREGMVDEAFELL 496
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 79/177 (44%), Gaps = 4/177 (2%)
Query: 185 LLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLA 244
LL M +KG D+I L+ GF++ A ++ E + +P+V +YNA ++G
Sbjct: 111 LLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALINGFC 169
Query: 245 IEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKA 301
+ A ++ MRSK+ +PD T+ +I + G L+ A + N+ C
Sbjct: 170 KMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVI 229
Query: 302 IFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
+ +L+ +G +D A L S D ++ + KE V+ A E+V
Sbjct: 230 TYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMV 286
>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 579
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 154/336 (45%), Gaps = 7/336 (2%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++IRGIY E + + F K G FR + Y + L +L Q
Sbjct: 136 TLIRGIYVEGKIGEALHLFDKMIGEG-FRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQ 194
Query: 86 YKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
K+ F +I K A +F EM + + ++N+L+ A N ++
Sbjct: 195 -KNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWK 253
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
V L ++ I PD+VS+NT++ A +G + A+ ++ +M ++G+ +++T+ L
Sbjct: 254 HVATLLNEMVDS-KIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTAL 312
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+ G +A K+++TMV PNV SYN ++G ++ KA+ L GEM +E+
Sbjct: 313 MDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQEL 372
Query: 265 NPDVFTFYALIKGFVNEGNLEEAKRWYNKS-GCGM--NKAIFKLLVPFVCEKGDLDFAFN 321
PD T+ LI G + L++A +++ C N +++L+ ++C+ L A
Sbjct: 373 IPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMA 432
Query: 322 LCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
L K D + +D + + +E A++L
Sbjct: 433 LLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDL 468
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 119/254 (46%), Gaps = 4/254 (1%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
+ A KVFD M + C V+S+N L+ ++ D+ LF ++ + I PD V+Y+
Sbjct: 322 MDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELI-PDTVTYS 380
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
T+I L A L +EM +L+T+ LL N A+A + + +
Sbjct: 381 TLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGS 440
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
N+ P+++ N +DG+ + + A +L + SK + PDV+T+ +I G G L+EA
Sbjct: 441 NLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEA 500
Query: 288 KRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDR 344
+ + +++GC +N I+ + + A L + + D + + L V
Sbjct: 501 SKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKM 560
Query: 345 LAKELRVEEAKELV 358
L+ + + K+++
Sbjct: 561 LSDDGLDQSLKQIL 574
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 114/255 (44%), Gaps = 4/255 (1%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
+ A F+ M + + FN LL + K + L + GI P++ + +
Sbjct: 42 IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMD-SFGIPPNIYTLH 100
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
+I +F + A ++L ++ K G + D TF TL+ G Y G+ +A +++ M+
Sbjct: 101 ILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGE 160
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
RP+V +Y ++GL T A+ L+G M K P+VF + +I + + EA
Sbjct: 161 GFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEA 220
Query: 288 KRWYNKSGC-GMNKAIFKL--LVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDR 344
+++ G++ IF L+ +C + L + + D VVD
Sbjct: 221 FNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDA 280
Query: 345 LAKELRVEEAKELVE 359
L KE +V EA ++V+
Sbjct: 281 LCKEGKVTEAHDVVD 295
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 86/214 (40%), Gaps = 17/214 (7%)
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
+ +NTI G++ S N +L M+ +D FN LL + +
Sbjct: 37 LHFNTI------DGAISSFNRML-RMQPPPSTVD---FNKLLTSIAKMKHHSTLLSLSHQ 86
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M + + PN+ + + ++ + A ++ ++ PD TF LI+G EG
Sbjct: 87 MDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGK 146
Query: 284 LEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL 340
+ EA ++K G + + L+ +C+ G+ A L + C +
Sbjct: 147 IGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNT 206
Query: 341 VVDRLAKELRVEEA----KELVELGKTNSYCRYN 370
++D L K+ +V EA E+V G + YN
Sbjct: 207 IIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYN 240
>gi|302758228|ref|XP_002962537.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
gi|300169398|gb|EFJ36000.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
Length = 439
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 121/251 (48%), Gaps = 7/251 (2%)
Query: 74 RWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNAL 133
+ +E E +K + + + +I Y K + AR++ +E C V++ ++
Sbjct: 88 KALELFHEMEKNFALVPEATTYTAIIKCYCKMDRLDQARQLLEE--SSCCSSDVIAITSV 145
Query: 134 LGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKG 193
+++ DE L D+ K +PD+V++N II F G + A +L + G
Sbjct: 146 ARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMG 205
Query: 194 IRLDLITFNTLLLGFYSNGRFADAEKIWETMV--NMNVRPNVRSYNARLDGLAIEKQTKK 251
+ +T+ TL+ GF +G ++A ++++ + + + PNV ++NA + GL + +
Sbjct: 206 CVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEH 265
Query: 252 ALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVP 308
A ELV +M+++++ D FT+ L+ G +G E R + + GC + + LV
Sbjct: 266 AFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVH 325
Query: 309 FVCEKGDLDFA 319
C+ G L A
Sbjct: 326 AHCKAGSLQDA 336
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 113/259 (43%), Gaps = 4/259 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHK- 156
+I + KA A ++ + + C +++ L+ S E LFK L +
Sbjct: 181 IIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRD 240
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
EP++V++N +I L+ A L+ +M+ + +R D T+ TL+ G GR ++
Sbjct: 241 HHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSE 300
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
+++E M+ P+V +Y + + A +++ M +K I PDV T+ L++
Sbjct: 301 VSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLE 360
Query: 277 GFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV 333
G G + A ++ K C ++ LV C+ +D A R
Sbjct: 361 GLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAP 420
Query: 334 DQAPLQLVVDRLAKELRVE 352
D A +L+V+ L K R +
Sbjct: 421 DPATCKLLVEMLCKRGRTD 439
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 122/302 (40%), Gaps = 44/302 (14%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LIA KA A + +++M R+C + N LL + + K D+ +F+ +
Sbjct: 9 LIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAIFRGIQ--- 65
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEK-------------------KGIRL-- 196
P +++ N +I F + LD A L +EMEK K RL
Sbjct: 66 -CSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRLDQ 124
Query: 197 -------------DLITFNTLLLGFYSNGRFADAEKIWETMVN-MNVRPNVRSYNARLDG 242
D+I ++ GF R +A ++ MV + +P++ ++N + G
Sbjct: 125 ARQLLEESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHG 184
Query: 243 LAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN-----KSGCG 297
+ ++A E++ + S P+ T+ LI GF GNL EA + +
Sbjct: 185 FCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAE 244
Query: 298 MNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
N F L+ +C+ L+ AF L K+ + D ++D L K+ R E +
Sbjct: 245 PNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRV 304
Query: 358 VE 359
E
Sbjct: 305 FE 306
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 70/167 (41%), Gaps = 17/167 (10%)
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
TF+ L+ G GR +A + + M+ + PN+R N L L + +A+ +
Sbjct: 5 TFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAI---F 61
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNK--------AIFKLLVPFVC 311
R + +P V T LI GF L++A +++ M K + ++ C
Sbjct: 62 RGIQCSPSVITLNILINGFCELQLLDKALELFHE----MEKNFALVPEATTYTAIIKCYC 117
Query: 312 EKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
+ LD A L + S C D + V K RV+EA +L+
Sbjct: 118 KMDRLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLL 162
>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 506
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 139/299 (46%), Gaps = 9/299 (3%)
Query: 35 NNLKRLVDKFKKSSDLGRFRTN---TGIYTGTV--QRLANAKRFRWIEEILEHQKQYKDI 89
+ L R D S G++ N G YT ++ L + EE+L+ +
Sbjct: 128 DGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLV 187
Query: 90 SKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGL 149
LI Y + E A F +M R+ + +++NAL+ +++ L
Sbjct: 188 PTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDL 247
Query: 150 FKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFY 209
++ G+ P + ++NT+I A+ G L+ +L EM++ G++ +++++ +++ F
Sbjct: 248 LMEMQDN-GVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFC 306
Query: 210 SNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVF 269
NG+ +A I + M + +V PN + YNA +D +A LV +M+S I+P +
Sbjct: 307 KNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIV 366
Query: 270 TFYALIKGFVNEGNLEEAKRWYNKSGCGM---NKAIFKLLVPFVCEKGDLDFAFNLCKR 325
T+ LIKG N+ + EA+ N + + L+ C +G++D A +L +R
Sbjct: 367 TYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQR 425
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 109/235 (46%), Gaps = 3/235 (1%)
Query: 60 YTGTVQRLANAKRFRWIEEIL-EHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEM 118
Y + L A+R +++L E Q + + E F LI YG+ E V EM
Sbjct: 228 YNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNT-LIDAYGRTGQLEKCFIVLSEM 286
Query: 119 PGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGS 178
+ V+S+ +++ A + K E + D+ HK + P+ YN II A+V+ G
Sbjct: 287 QENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHK-DVLPNAQVYNAIIDAYVEHGP 345
Query: 179 LDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNA 238
D A L+ +M+ GI ++T+N L+ G + + ++AE+I ++ N + P+ SYN
Sbjct: 346 NDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNT 405
Query: 239 RLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK 293
+ KAL+L M I V T++ LI G G L E + Y K
Sbjct: 406 LISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQK 460
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 94/204 (46%), Gaps = 3/204 (1%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ P V YNT+I + G L+ A + +M+ + I+ D IT+N L+ G R +A
Sbjct: 185 GLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNA 244
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ + M + V P V ++N +D Q +K ++ EM+ + P+V ++ +++
Sbjct: 245 QDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNA 304
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
F G + EA + N ++ ++ E G D AF L ++ S
Sbjct: 305 FCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPS 364
Query: 335 QAPLQLVVDRLAKELRVEEAKELV 358
L++ L + ++ EA+E++
Sbjct: 365 IVTYNLLIKGLCNQSQISEAEEII 388
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 108/233 (46%), Gaps = 4/233 (1%)
Query: 129 SFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
S+N ++ + + + +F ++ + + P+ ++YNT+I + G L++ L +
Sbjct: 17 SYNVVIAGMWRAGRGGDAVEVFDEMTER-AVLPNHITYNTMIDGHIKGGDLEAGFRLRDQ 75
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
M G++ + IT+N LL G GR + + + M + + P+ +Y+ DGL+
Sbjct: 76 MVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGD 135
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL---EEAKRWYNKSGCGMNKAIFKL 305
+K L L G+ + +T L+ G +G + EE + +G + I+
Sbjct: 136 SKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNT 195
Query: 306 LVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
L+ C+ G+L+ AF+ + S D +++ L K R+ A++L+
Sbjct: 196 LINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLL 248
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 3/171 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLP-HK 156
+I Y + + A + ++M +++++N L+ N + E + + L H+
Sbjct: 336 IIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHR 395
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
L PD VSYNT+I A +G++D A L M K GI+ + T++ L+ G GR +
Sbjct: 396 L--IPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNE 453
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPD 267
E +++ M+ NV P+ +N ++ + KA +L EM K N D
Sbjct: 454 MEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKRNNHD 504
>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
gi|194700420|gb|ACF84294.1| unknown [Zea mays]
gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
Length = 598
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 128/287 (44%), Gaps = 39/287 (13%)
Query: 110 NARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTI 169
+A V D M R C V+++N LL A + + + L D G EP+ V+YN I
Sbjct: 181 DALVVLDGMLCRGCAPDVVTYNILLQAACKGRGYRQALELI-DFMRAEGCEPNNVTYNVI 239
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
I A +G +D A LL + +G + + + +NT+L GF S R+ DA++I + MV N
Sbjct: 240 IDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENC 299
Query: 230 RP-----------------------------------NVRSYNARLDGLAIEKQTKKALE 254
P NV +YNA + G+ + ALE
Sbjct: 300 PPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALE 359
Query: 255 LVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCG---MNKAIFKLLVPFVC 311
L+ M+S PD+ T+ ++KG + E+A+ K + + F ++ F C
Sbjct: 360 LLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWC 419
Query: 312 EKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
+KG + AF + K+ + C + ++ L K ++E+A EL+
Sbjct: 420 QKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELL 466
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 138/308 (44%), Gaps = 5/308 (1%)
Query: 54 RTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARK 113
+ NT Y ++ + +R+ +EIL+ + E +I + + +
Sbjct: 265 KPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTL 324
Query: 114 VFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAF 173
++M C V+++NA++ D L ++ G +PD+V+YNT++K
Sbjct: 325 YLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNM-QSFGCKPDIVTYNTVLKGL 383
Query: 174 VDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNV 233
+ A L+ +M + D TFNT++ + G A ++++ M PN
Sbjct: 384 CSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNS 443
Query: 234 RSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK 293
+Y+ + GL + ++ALEL+ EM +K N D + L + E +EE + +K
Sbjct: 444 TTYSTIIGGLTKAGKMEQALELLNEMANKGFNTDKM-YRVLTESLNKEDKIEEVVQVVHK 502
Query: 294 ---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELR 350
SG ++ ++ +C G D+A ++ S C+ D++ ++++ L E
Sbjct: 503 LQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCGCMPDESTYIILIEGLFYEGY 562
Query: 351 VEEAKELV 358
+EA+EL+
Sbjct: 563 SKEARELL 570
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 113/239 (47%), Gaps = 3/239 (1%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
+VI G+ ++ N+ ++ G + + Y ++ L +A R+ EE++ Q
Sbjct: 343 AVISGMCEQGNVDSALELLSNMQSFG-CKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQ 401
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
+ +I+ + + + A +VF +MP + C +++ ++G + K ++
Sbjct: 402 NDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQ 461
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
L ++ +K G D + Y + ++ + ++ ++++++ GI + +NT+L
Sbjct: 462 ALELLNEMANK-GFNTDKM-YRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVL 519
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
LG NG+ A + MV+ P+ +Y ++GL E +K+A EL+ + S+++
Sbjct: 520 LGLCRNGKTDYAIDVLADMVSCGCMPDESTYIILIEGLFYEGYSKEARELLSRLCSRDV 578
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 82/194 (42%), Gaps = 3/194 (1%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G E +Y ++ + G L+ A ++ M N L+ GR ADA
Sbjct: 123 GPEATAATYGALVDGYCRAGLLEDARRVVGGMPAHVQASSAYAHNPLIHALCERGRVADA 182
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ + M+ P+V +YN L + ++ALEL+ MR++ P+ T+ +I
Sbjct: 183 LVVLDGMLCRGCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDA 242
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
EG++++A+ N GC N + ++ C A + E C +
Sbjct: 243 MCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPN 302
Query: 335 QAPLQLVVDRLAKE 348
+A L ++++ L ++
Sbjct: 303 EATLNVIINTLCRK 316
>gi|255660926|gb|ACU25632.1| pentatricopeptide repeat-containing protein [Neosparton
ephedroides]
Length = 484
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 143/320 (44%), Gaps = 34/320 (10%)
Query: 73 FRWIEE--ILEHQKQYK---------------------DISKEGFT------ARLIALYG 103
FRW+E + EH ++ D+ K+G +I YG
Sbjct: 32 FRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVLMIDSYG 91
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K + + + K+F +M E+T+ S++AL + +F F + + GIEP
Sbjct: 92 KEGIVQESVKLFQKMEELGVERTIKSYDALFKVIMRRGRFMMAKRYFNKMLSE-GIEPTR 150
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
++N +I F G +++AN +M+ + I D+IT+NT++ G+ + +AEK +
Sbjct: 151 HTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVITYNTMINGYCRVKKMEEAEKYFVE 210
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M N+ P V +Y + G Q AL LV EM+ I P+ T+ L+ G N
Sbjct: 211 MKGKNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYSTLLPGLCNAEK 270
Query: 284 LEEA----KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQ 339
+ EA K +K + +IF L+ C+ G+LD A ++ K +
Sbjct: 271 MSEARSILKEMVDKYIAPTDNSIFMRLISSHCKVGNLDAAADVLKAMIRLSVPTEAGHYG 330
Query: 340 LVVDRLAKELRVEEAKELVE 359
++++ K + ++A +L++
Sbjct: 331 VLIENYCKAGQYDQAVKLLD 350
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 113/246 (45%), Gaps = 22/246 (8%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
F A++ F++M E T +FN ++ S K + + F+D+ + I PD+++YN
Sbjct: 131 FMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSR-EISPDVITYN 189
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
T+I + ++ A EM+ K I ++T+ TL+ G+ S + DA ++ E M
Sbjct: 190 TMINGYCRVKKMEEAEKYFVEMKGKNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGY 249
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINP-DVFTFYALIKGFVNEGNLEE 286
++PN +Y+ L GL ++ +A ++ EM K I P D F LI GNL+
Sbjct: 250 GIKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYIAPTDNSIFMRLISSHCKVGNLDA 309
Query: 287 AKRWYNKSGCGMNKAIFKLLVPF-----------VCEKGDLDFAFNLCKRTFSERCLV-D 334
A + KA+ +L VP C+ G D A L + + +V
Sbjct: 310 A--------ADVLKAMIRLSVPTEAGHYGVLIENYCKAGQYDQAVKLLDKLIEKDIIVRP 361
Query: 335 QAPLQL 340
Q+ L +
Sbjct: 362 QSTLHM 367
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 89/198 (44%), Gaps = 9/198 (4%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI Y ++A ++ +EM G + ++++ LL N++K E + K++ K
Sbjct: 226 LIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKY 285
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
D + +I + G+LD+A +L M + + + + L+ + G++ A
Sbjct: 286 IAPTDNSIFMRLISSHCKVGNLDAAADVLKAMIRLSVPTEAGHYGVLIENYCKAGQYDQA 345
Query: 218 EKIWETMV--NMNVRPNV------RSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVF 269
K+ + ++ ++ VRP +YN ++ L QT KA LV ++ + D
Sbjct: 346 VKLLDKLIEKDIIVRPQSTLHMEPSAYNPIVEYLCNNGQTSKAEALVRQLMKLGVQ-DPT 404
Query: 270 TFYALIKGFVNEGNLEEA 287
LI+G EG+ + A
Sbjct: 405 ALNTLIRGHSQEGSPDSA 422
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/215 (20%), Positives = 94/215 (43%), Gaps = 17/215 (7%)
Query: 37 LKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTA 96
LK +VDK+ +D I+ + ++L+ + ++ G
Sbjct: 278 LKEMVDKYIAPTD-------NSIFMRLISSHCKVGNLDAAADVLKAMIRLSVPTEAGHYG 330
Query: 97 RLIALYGKAAMFENARKVFDEM--------PGRNCEQTVLSFNALLGACVNSKKFDEVDG 148
LI Y KA ++ A K+ D++ P ++N ++ N+ + + +
Sbjct: 331 VLIENYCKAGQYDQAVKLLDKLIEKDIIVRPQSTLHMEPSAYNPIVEYLCNNGQTSKAEA 390
Query: 149 LFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
L + L KLG++ D + NT+I+ +GS DSA LL M ++ + + +++L+ +
Sbjct: 391 LVRQL-MKLGVQ-DPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYDSLVQSY 448
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
ADA+ ++M+ + P+ + + ++ L
Sbjct: 449 LKKSEPADAKAALDSMIENDHLPDSSLFRSVMESL 483
>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 807
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/381 (22%), Positives = 166/381 (43%), Gaps = 49/381 (12%)
Query: 24 IGSVIRGIYKENNLKRLVDK-FKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEH 82
+ S++RG+ VD F + +LG Y+ ++ + + R +W +IL
Sbjct: 141 VSSLLRGLCDAKRTDEAVDVLFHRMPELGCVPDAIS-YSTVLKSVCDDGRSQWALDILRM 199
Query: 83 QKQYKDISKEGFTARLIALYG--KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNS 140
+ ++G K A +F EM + V+++N+++ A +
Sbjct: 200 AVKQGGGCPCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKA 259
Query: 141 KKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGI------ 194
+ D+ G+ + + G++PD V+YNT+I + G A + EM +G+
Sbjct: 260 RAVDKAQGILRQMVGN-GVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVT 318
Query: 195 -----------------------------RLDLITFNTLLLGFYSNGRFADAEKIWETMV 225
+L++I+++TLL G+ + G D ++ MV
Sbjct: 319 CSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMV 378
Query: 226 NMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLE 285
+ PN +N ++G A ++A+ + +M+ + +NPDV T+ A+I F G+++
Sbjct: 379 RDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMD 438
Query: 286 EAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSE---RCLVDQAPLQ 339
+A +N G N A+++ L+ C GDL A L ++ C++ A L
Sbjct: 439 DAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASL- 497
Query: 340 LVVDRLAKELRVEEAKELVEL 360
++ L KE RV EA+ + ++
Sbjct: 498 --INHLCKEGRVFEAQRIFDM 516
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 100/199 (50%), Gaps = 7/199 (3%)
Query: 127 VLSFNALLGACVNSKKFDE-VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTL 185
V+ ++LL ++K+ DE VD LF +P +LG PD +SY+T++K+ D G A +
Sbjct: 138 VIVVSSLLRGLCDAKRTDEAVDVLFHRMP-ELGCVPDAISYSTVLKSVCDDGRSQWALDI 196
Query: 186 LYEMEKK--GIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
L K+ G +++ ++T++ G + G+ +A ++ M V PNV +YN+ + L
Sbjct: 197 LRMAVKQGGGCPCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHAL 256
Query: 244 AIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNK 300
+ KA ++ +M + PD T+ LI G+ G ++A R + G N
Sbjct: 257 CKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNT 316
Query: 301 AIFKLLVPFVCEKGDLDFA 319
V F+C+ G ++ A
Sbjct: 317 VTCSTFVAFLCKHGRIEEA 335
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/298 (21%), Positives = 125/298 (41%), Gaps = 39/298 (13%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+ Y K M A +F++M R VL++ A++ A D+ F + K
Sbjct: 392 LVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDK- 450
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGI----------------------- 194
G+EP+ Y +I+ F G L A L+YE+ KG+
Sbjct: 451 GVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEA 510
Query: 195 ------------RLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDG 242
+ D+ F +L+ G+ G+ ++A ++ + MV++ + P++ +Y ++G
Sbjct: 511 QRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNG 570
Query: 243 LAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMN 299
+ L L E+ K + P FT+ ++ G + G AK + +SG +
Sbjct: 571 CCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVT 630
Query: 300 KAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
+ +L+ +C + A + ++ + D L +++ ++ K R EEA+ L
Sbjct: 631 IPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGL 688
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 117/248 (47%), Gaps = 12/248 (4%)
Query: 79 ILEHQKQYKDISKEG-------FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFN 131
+ E Q+ + I + G FT+ LI Y A +V D M E ++++
Sbjct: 507 VFEAQRIFDMIIRTGEKADVNIFTS-LIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYG 565
Query: 132 ALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEK 191
L+ C + + D+ LF++L HK G++P +Y I+ G +A + EM +
Sbjct: 566 TLVNGCCKNGRIDDGLILFRELLHK-GVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIE 624
Query: 192 KGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKK 251
GI + + T++ LL G N +A +++ + MNV+ ++ N + + ++ ++
Sbjct: 625 SGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREE 684
Query: 252 ALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVP 308
A L + + P V T+ +++ + EG++EEA+ ++ KSG ++V
Sbjct: 685 AEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSHFINVIVR 744
Query: 309 FVCEKGDL 316
+ EKG++
Sbjct: 745 TLLEKGEI 752
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 82/407 (20%), Positives = 151/407 (37%), Gaps = 75/407 (18%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQ-- 83
+V+ G++KE + D F + + G N Y + L A+ + IL
Sbjct: 216 TVVHGLFKEGKVGEACDLFHEMTQQG-VPPNVVTYNSVIHALCKARAVDKAQGILRQMVG 274
Query: 84 ---------------------------KQYKDISKEGF------TARLIALYGKAAMFEN 110
+ +K+++ G + +A K E
Sbjct: 275 NGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEE 334
Query: 111 ARKVFDEMPGRNCEQTVLSFNALL----------------------GACVNSKKFD---- 144
AR+ FD M + + ++S++ LL G N F+
Sbjct: 335 AREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVN 394
Query: 145 ---------EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIR 195
E +F+D+ K G+ PD+++Y +I AF GS+D A M KG+
Sbjct: 395 GYAKCGMVREAMFIFEDM-QKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVE 453
Query: 196 LDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALEL 255
+ + L+ GF ++G AE++ + N + P + S+ + ++ L E + +A +
Sbjct: 454 PNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRI 513
Query: 256 VGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCE 312
+ DV F +LI G+ G + EA R ++ G + + LV C+
Sbjct: 514 FDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCK 573
Query: 313 KGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
G +D L + + +++D L R AKE+ +
Sbjct: 574 NGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQ 620
>gi|255542424|ref|XP_002512275.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548236|gb|EEF49727.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 532
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 133/305 (43%), Gaps = 42/305 (13%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
E ++F+ M C V+++N L+ + + D L K++ + PD+++Y +
Sbjct: 215 EKGFELFNAMQSFGCLPDVVTYNTLISGLCKANELDRACDLLKEVQSRNDCSPDVMTYTS 274
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAE---------- 218
II F G L++A+ L EM + GI ++TFN L+ GF G AE
Sbjct: 275 IISGFRKLGKLEAASVLFEEMIRSGIEPTVVTFNVLIDGFGKIGNMVAAEAMHEKMASYS 334
Query: 219 -------------------------KIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKAL 253
K+W+ M NV PN+ +Y+ ++ L + + +A
Sbjct: 335 CIPDVVTFTSLIDGYCRTGDIRLGLKVWDVMKARNVSPNIYTYSVIINALCKDNRIHEAR 394
Query: 254 ELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFV 310
+L+ +++ ++ P F + +I GF GN++EA + C +K F +L+
Sbjct: 395 DLLRQLKCSDVFPKPFIYNPVIDGFCKAGNVDEANVIVTEMEEKRCRPDKVTFTILIIGH 454
Query: 311 CEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKTNSYCRYN 370
C KG + A ++ K+ + C D + +V L K + EA +V+ + N
Sbjct: 455 CMKGRMVEALDIFKKMLAIGCAPDNITISSLVACLLKAGKPSEAFHIVQTASED----LN 510
Query: 371 LKFPS 375
L F S
Sbjct: 511 LSFSS 515
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 91/202 (45%), Gaps = 5/202 (2%)
Query: 77 EEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGA 136
E + E Y I LI Y + KV+D M RN + +++ ++ A
Sbjct: 324 EAMHEKMASYSCIPDVVTFTSLIDGYCRTGDIRLGLKVWDVMKARNVSPNIYTYSVIINA 383
Query: 137 CVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRL 196
+ E L + L + P YN +I F G++D AN ++ EME+K R
Sbjct: 384 LCKDNRIHEARDLLRQLKCS-DVFPKPFIYNPVIDGFCKAGNVDEANVIVTEMEEKRCRP 442
Query: 197 DLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELV 256
D +TF L++G GR +A I++ M+ + P+ + ++ + L + +A +V
Sbjct: 443 DKVTFTILIIGHCMKGRMVEALDIFKKMLAIGCAPDNITISSLVACLLKAGKPSEAFHIV 502
Query: 257 GEMRSKEINPDVFTFYALIKGF 278
+ S+++N +F +L K F
Sbjct: 503 -QTASEDLN---LSFSSLRKTF 520
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 55/119 (46%)
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
++ +F G D A L+ E++ + R+ +N LL G+ +A +++ + +
Sbjct: 134 LVTSFAQAGKFDLAKKLIIEVQGEEARISSFVYNYLLNELVKGGKVHEAIFLFKENLAFH 193
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
PN ++N + GL + +K EL M+S PDV T+ LI G L+ A
Sbjct: 194 SPPNTWTFNILIRGLCRVGEVEKGFELFNAMQSFGCLPDVVTYNTLISGLCKANELDRA 252
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 82/199 (41%), Gaps = 4/199 (2%)
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
+Y +I++ G D ++ M G +D L+ F G+F A+K+ +
Sbjct: 95 TYELLIRSLCQMGLHDLVEMVIGYMRSDGHLIDSRVLGFLVTSFAQAGKFDLAKKLIIEV 154
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
R + YN L+ L + +A+ L E + P+ +TF LI+G G +
Sbjct: 155 QGEEARISSFVYNYLLNELVKGGKVHEAIFLFKENLAFHSPPNTWTFNILIRGLCRVGEV 214
Query: 285 EEAKRWYNKS---GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSER-CLVDQAPLQL 340
E+ +N GC + + L+ +C+ +LD A +L K S C D
Sbjct: 215 EKGFELFNAMQSFGCLPDVVTYNTLISGLCKANELDRACDLLKEVQSRNDCSPDVMTYTS 274
Query: 341 VVDRLAKELRVEEAKELVE 359
++ K ++E A L E
Sbjct: 275 IISGFRKLGKLEAASVLFE 293
>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
Length = 662
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 141/306 (46%), Gaps = 9/306 (2%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
V+ + E N+ + FK ++ F+ YT ++RL + I+ +L+ K
Sbjct: 43 VLNKLKNEPNILLALHFFKSIANSNSFKHTPLTYTTMIKRLGYERDIDGIQYLLQLMKLE 102
Query: 87 KDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEV 146
E +I Y +A + E A K F + C+ +V +N +L A ++ KF +
Sbjct: 103 GISCNEDLFVIVINAYRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDALLSENKFQMI 162
Query: 147 DGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLL 206
+G++ ++ GIE ++ +YN ++KA +D+A LL EM KG D +++ T++
Sbjct: 163 NGIYNNMKRD-GIELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVS 221
Query: 207 GFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINP 266
G+ +A ++ +M ++ V YNA ++G E + ++ EL EM + I+P
Sbjct: 222 SMCRLGKVEEAREL-----SMRIKSFVPVYNALINGFCREHKMEEVFELFNEMAVEGIDP 276
Query: 267 DVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLC 323
DV T+ +I GN+E A K GC N F L+ G L A +L
Sbjct: 277 DVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLW 336
Query: 324 KRTFSE 329
R E
Sbjct: 337 NRMIQE 342
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 105/205 (51%), Gaps = 4/205 (1%)
Query: 130 FNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEM 189
+NAL+ K +EV LF ++ + GI+PD+++Y+T+I + G+++ A +L +M
Sbjct: 246 YNALINGFCREHKMEEVFELFNEMAVE-GIDPDVITYSTVINTLSEMGNVEMALAVLAKM 304
Query: 190 EKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQT 249
+G ++ TF +L+ G++ GR +A +W M+ PN +YN + GL +
Sbjct: 305 FLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKM 364
Query: 250 KKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLL 306
+A+ + +M + P+ T+ LI GF G+L A +NK +GC N ++ +
Sbjct: 365 VEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCM 424
Query: 307 VPFVCEKGDLDFAFNLCKRTFSERC 331
V +C + A +L + + C
Sbjct: 425 VDVLCRNSMFNHALHLIENMANGNC 449
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 87/198 (43%), Gaps = 4/198 (2%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
E A V +M R C V +F +L+ + E L+ + + G EP+ V+YNT
Sbjct: 295 EMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQE-GSEPNTVAYNT 353
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
+I G + A ++ +ME+ G+ + T++TL+ GF G A +IW M+
Sbjct: 354 LIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNG 413
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
PNV Y +D L AL L+ M + P+ TF IKG G E A
Sbjct: 414 CLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAM 473
Query: 289 RWYNKS---GCGMNKAIF 303
+ N+ GC N +
Sbjct: 474 KVLNQMRQYGCAPNVTTY 491
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 104/214 (48%), Gaps = 5/214 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
++ + + +MF +A + + M NC ++FN + S K + + + +
Sbjct: 424 MVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQM-RQY 482
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G P++ +YN ++ + A ++ E+E+ I+ +L+T+NT+L GF G F A
Sbjct: 483 GCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGA 542
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK-EINPDVFTFYALIK 276
+I ++ +P+ +YN + + + K A++LV + K E PDVFT+ +L+
Sbjct: 543 LQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTYTSLLW 602
Query: 277 GFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLV 307
G N ++EA +K G N+A + LV
Sbjct: 603 GVCNWIGVDEAVVHLDKMINEGICPNRATWNALV 636
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 3/171 (1%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G P++V Y ++ + A L+ M + ITFNT + G +G+ A
Sbjct: 413 GCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWA 472
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
K+ M PNV +YN LDGL K+T++AL++VGE+ EI ++ T+ ++ G
Sbjct: 473 MKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSG 532
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKR 325
F + G + A + K G + + ++ C++G++ A L R
Sbjct: 533 FCHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDR 583
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 90/200 (45%), Gaps = 14/200 (7%)
Query: 51 GRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFEN 110
G NT + ++ L + + W ++L +QY ++ A
Sbjct: 447 GNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTRE 506
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFK---DLPHKL---GIEPDLV 164
A ++ E+ + ++++N +L ++ G+FK + KL G +PD +
Sbjct: 507 ALQIVGEIEEMEIKSNLVTYNTILSGFCHA-------GMFKGALQIAGKLLVGGTKPDSI 559
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRL-DLITFNTLLLGFYSNGRFADAEKIWET 223
+YNT+I A+ +G + +A L+ + KKG D+ T+ +LL G + +A +
Sbjct: 560 TYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTYTSLLWGVCNWIGVDEAVVHLDK 619
Query: 224 MVNMNVRPNVRSYNARLDGL 243
M+N + PN ++NA + GL
Sbjct: 620 MINEGICPNRATWNALVRGL 639
Score = 45.1 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 88/235 (37%), Gaps = 21/235 (8%)
Query: 139 NSKKFDEVDGLFKDLPHKLGIEPDL--------------VSYN-----TIIKAFVDKGSL 179
NS F + + +LG E D+ +S N +I A+ G
Sbjct: 65 NSNSFKHTPLTYTTMIKRLGYERDIDGIQYLLQLMKLEGISCNEDLFVIVINAYRRAGLA 124
Query: 180 DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNAR 239
+ A Y + + G + + +N +L S +F I+ M + NV +YN
Sbjct: 125 EQALKTFYRIGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNML 184
Query: 240 LDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMN 299
L L + A +L+ EM K PD ++ ++ G +EEA+ + +
Sbjct: 185 LKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEARELSMRIKSFV- 243
Query: 300 KAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA 354
++ L+ C + ++ F L E D V++ L++ VE A
Sbjct: 244 -PVYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMA 297
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 79/208 (37%), Gaps = 32/208 (15%)
Query: 150 FKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFY 209
FK + + + ++Y T+IK + +D LL M+ +GI + F ++ +
Sbjct: 60 FKSIANSNSFKHTPLTYTTMIKRLGYERDIDGIQYLLQLMKLEGISCNEDLFVIVINAYR 119
Query: 210 SNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVF 269
G A K + + +P+V+ YN LD L E + + + M+ I +V+
Sbjct: 120 RAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVY 179
Query: 270 TFYALIKGFVNEGNLEEAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSE 329
T+ L+K C+ +D A L +
Sbjct: 180 TYNMLLKAL--------------------------------CKNDRVDAARKLLAEMSYK 207
Query: 330 RCLVDQAPLQLVVDRLAKELRVEEAKEL 357
C+ D VV + + +VEEA+EL
Sbjct: 208 GCIPDAVSYTTVVSSMCRLGKVEEAREL 235
>gi|224056581|ref|XP_002298921.1| predicted protein [Populus trichocarpa]
gi|222846179|gb|EEE83726.1| predicted protein [Populus trichocarpa]
Length = 326
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 154/321 (47%), Gaps = 13/321 (4%)
Query: 14 TTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRF 73
T P + + + N++ + +++ K D ++ N +YT + +LA AK F
Sbjct: 3 THKDWLSPNEVIKIFENLKDPNSIISVWNQYSKRKD---YKPNEALYTQVINKLAQAKNF 59
Query: 74 RWIEEILEHQKQYKDIS-KEGFTARLIALYGK-AAMFENARKVFDEMP-GRNCEQTVLSF 130
IE+I++ K K F +I +YG+ A + A + +MP G NC V SF
Sbjct: 60 DAIEDIMQKIKLDKSCRLSNDFFHNVIKIYGQLAGRIKKAMETLFDMPKGYNCWPNVKSF 119
Query: 131 NALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEME 190
N +L V++K FD V ++ P LGIE D+ S N +IK + G L++A +L E
Sbjct: 120 NLVLNLLVSAKVFDVVHEVYLQAPM-LGIEIDVCSLNILIKGLCENGDLEAAFNVLDEFP 178
Query: 191 KKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTK 250
K+ ++ TF+TL+ G G+ +A + E M + + ++N + GL + +
Sbjct: 179 KQRCEPNVRTFSTLMHGLCKKGKVDEAFGLLERMEKEGIDADTITFNILISGLRKQGKVV 238
Query: 251 KALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS-GCGMNKAI--FKLLV 307
+ LEL+ M K P+ ++ ++ G ++ E K + + G G++ + +K LV
Sbjct: 239 EGLELLERMNIKGCEPNAGSYQEILYGLLDAEKYVEGKEFMVRMIGQGVDPSFVSYKKLV 298
Query: 308 PFVCEK---GDLDFAFNLCKR 325
+C++ DLD+ R
Sbjct: 299 HGLCKERLLRDLDWVLKQMAR 319
Score = 37.7 bits (86), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 95/238 (39%), Gaps = 41/238 (17%)
Query: 128 LSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLY 187
LS N ++ N K + + ++ + +P+ Y +I + D+ ++
Sbjct: 8 LSPNEVIKIFENLKDPNSIISVWNQYSKRKDYKPNEALYTQVINKLAQAKNFDAIEDIMQ 67
Query: 188 EME-KKGIRLDLITFNTLLLGFYSNGRFAD-AEKIWETMVNM----NVRPNVRSYNARLD 241
+++ K RL F+ ++ + G+ A +K ET+ +M N PNV+S+N L+
Sbjct: 68 KIKLDKSCRLSNDFFHNVIKIY---GQLAGRIKKAMETLFDMPKGYNCWPNVKSFNLVLN 124
Query: 242 GLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKA 301
L K E+ + I DV + LIKG
Sbjct: 125 LLVSAKVFDVVHEVYLQAPMLGIEIDVCSLNILIKG------------------------ 160
Query: 302 IFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+CE GDL+ AFN+ +RC + ++ L K+ +V+EA L+E
Sbjct: 161 --------LCENGDLEAAFNVLDEFPKQRCEPNVRTFSTLMHGLCKKGKVDEAFGLLE 210
>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
Length = 448
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 136/319 (42%), Gaps = 5/319 (1%)
Query: 51 GRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFEN 110
G ++ Y+ + A+ F+ +L+ ++ + +I ++
Sbjct: 27 GLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDS 86
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A + +M R+C +V+++ L+ A S + + + +D+ G P++V+YNT+I
Sbjct: 87 ALVHYRDMQ-RHCAPSVITYTILVDALCKSARISDASLILEDMIEA-GCAPNVVTYNTLI 144
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
F G++D A L +M + D+ T+N L+ G+ R D K+ + MV
Sbjct: 145 NGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCE 204
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
PN +YN +D L + A L M ++ P FTF +I F G L+ A
Sbjct: 205 PNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYEL 264
Query: 291 Y---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAK 347
+ GC + + +++ C +D A L +R C D +V L K
Sbjct: 265 FQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCK 324
Query: 348 ELRVEEAKELVELGKTNSY 366
+V+EA E+ E+ + Y
Sbjct: 325 ASQVDEAYEVYEVLRNGGY 343
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/345 (21%), Positives = 154/345 (44%), Gaps = 22/345 (6%)
Query: 25 GSVIRGIYKENNLK---RLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILE 81
++I G K + + RL+D+ +K + +Y ++ L + R ++ L
Sbjct: 37 STLINGFCKARDFQQAYRLLDEMEKRG----IVPHNAVYNTIIKGLCDNGR---VDSALV 89
Query: 82 HQKQYKDISKEGFTAR-----LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGA 136
H Y+D+ + + L+ K+A +A + ++M C V+++N L+
Sbjct: 90 H---YRDMQRHCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLING 146
Query: 137 CVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRL 196
DE LF + PD+ +YN +I + + LL EM K G
Sbjct: 147 FCKLGNMDEAVVLFNQMLEN-SCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEP 205
Query: 197 DLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELV 256
+ IT+NTL+ +G++ DA + + M+ + +P+ ++N +D Q A EL
Sbjct: 206 NFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELF 265
Query: 257 GEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEK 313
M + PD++T+ +I G +++A++ + +GC + + +V +C+
Sbjct: 266 QLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKA 325
Query: 314 GDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
+D A+ + + + +D ++D L K R+++A++L+
Sbjct: 326 SQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLL 370
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 110/268 (41%), Gaps = 40/268 (14%)
Query: 131 NALLGACVNSKKFDEVDGLFKDLPHKLGI-EPDLVSYNTIIKAFVDKGSLDSANTLLYEM 189
N LL A V KK E LFK+ H G+ PD ++Y+T+I F A LL EM
Sbjct: 2 NCLLSAFVRKKKAQEAYDLFKN--HLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEM 59
Query: 190 EKKGIRLDLITFNTLLLGFYSNG----------------------------------RFA 215
EK+GI +NT++ G NG R +
Sbjct: 60 EKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRHCAPSVITYTILVDALCKSARIS 119
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
DA I E M+ PNV +YN ++G +A+ L +M +PDVFT+ LI
Sbjct: 120 DASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILI 179
Query: 276 KGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCL 332
G+ + ++ + K GC N + L+ + + G AFNL + C
Sbjct: 180 DGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCK 239
Query: 333 VDQAPLQLVVDRLAKELRVEEAKELVEL 360
L++D K +++ A EL +L
Sbjct: 240 PSHFTFNLMIDMFCKVGQLDLAYELFQL 267
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 101/214 (47%), Gaps = 4/214 (1%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K+ + +A + M R+C+ + +FN ++ + D LF+ + + G PD+
Sbjct: 219 KSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDR-GCLPDI 277
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
+YN +I +D A LL M + G D++T+N+++ G + +A +++E
Sbjct: 278 YTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEV 337
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
+ N +V + + +DGL ++ A +L+ EM PDV + LI GF
Sbjct: 338 LRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQ 397
Query: 284 LEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKG 314
L+++ ++++ GC + +++ +C+
Sbjct: 398 LDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSA 431
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 79/167 (47%), Gaps = 1/167 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I+ +A ++AR++ + M C V+++N+++ + + DE +++ L +
Sbjct: 283 MISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNG- 341
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G D+V+ +T+I LD A LL EME+ G D++ + L+ GF + +
Sbjct: 342 GYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKS 401
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+ M++ P V +Y+ +D L + + L+ M + +
Sbjct: 402 LAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGV 448
>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
Length = 799
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 100/183 (54%), Gaps = 1/183 (0%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A ++ EM + E + ++N+L+ + ++ D+ + G++PD+ +Y TII
Sbjct: 479 ANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDM-DEAGLKPDVYTYTTII 537
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
A LD A++LL EM KGI+ ++T+N L+ GF +GR +++ E M+ N+
Sbjct: 538 GALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIH 597
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
PN +YN+ + IEK K E+ M S+E+ P+ T+ LIKG N++EA +
Sbjct: 598 PNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYF 657
Query: 291 YNK 293
+++
Sbjct: 658 HSE 660
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 143/341 (41%), Gaps = 40/341 (11%)
Query: 56 NTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVF 115
NT Y ++ L A R + ++ + D+ G ++ Y + E A K+
Sbjct: 252 NTCSYNILLKALCTAGRIKDAHQLFDEMASPPDVVTYGI---MVHGYCTLSELETAIKLL 308
Query: 116 DEMPGRNCEQTVLSFNALL----------------------GACVNSKKFDEVDGLFK-- 151
EM R E +++ +++ G +++ F V F
Sbjct: 309 SEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRK 368
Query: 152 ----------DLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITF 201
D K G+ D V+Y +I G L A +L EME KG+ +D +T+
Sbjct: 369 GDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTY 428
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS 261
L+ G+ G+ +A + MV V PNV +Y A DGL + A EL+ EM S
Sbjct: 429 TVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCS 488
Query: 262 KEINPDVFTFYALIKGFVNEGNLEEAKRW---YNKSGCGMNKAIFKLLVPFVCEKGDLDF 318
K + ++FT+ +LI G GNLE+A R +++G + + ++ +C+ +LD
Sbjct: 489 KGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDR 548
Query: 319 AFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
A +L + + ++++ RVE K L+E
Sbjct: 549 AHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLE 589
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 18/171 (10%)
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
+ GI P S N ++ LD A L E+ +K + ++N LL + GR
Sbjct: 219 QYGISPSPESCNAVLCRL----PLDEAVQLFQELPEK----NTCSYNILLKALCTAGRIK 270
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM--RSKEINPDVFTFYA 273
DA ++++ M + P+V +Y + G + + A++L+ EM R E+NP +T +
Sbjct: 271 DAHQLFDEMAS---PPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYT--S 325
Query: 274 LIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFN 321
+I +EG + +A R G ++ A+F ++ C KGDL A N
Sbjct: 326 VIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARN 376
>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 754
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 100/183 (54%), Gaps = 1/183 (0%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A ++ EM + E + ++N+L+ + ++ D+ + G++PD+ +Y TII
Sbjct: 479 ANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDM-DEAGLKPDVYTYTTII 537
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
A LD A++LL EM KGI+ ++T+N L+ GF +GR +++ E M+ N+
Sbjct: 538 GALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIH 597
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
PN +YN+ + IEK K E+ M S+E+ P+ T+ LIKG N++EA +
Sbjct: 598 PNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYF 657
Query: 291 YNK 293
+++
Sbjct: 658 HSE 660
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 142/341 (41%), Gaps = 40/341 (11%)
Query: 56 NTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVF 115
NT Y ++ L A R + ++ + D+ G ++ Y + E A K+
Sbjct: 252 NTCSYNILLKALCTAGRIKDAHQLFDEMASPPDVVTYGI---MVHGYCTLSELETAIKLL 308
Query: 116 DEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLP--------------------- 154
EM R E +++ +++ + + + + +D+
Sbjct: 309 SEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRK 368
Query: 155 -------------HKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITF 201
K G+ D V+Y +I G L A +L EME KG+ +D +T+
Sbjct: 369 GDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTY 428
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS 261
L+ G+ G+ +A + MV V PNV +Y A DGL + A EL+ EM S
Sbjct: 429 TVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCS 488
Query: 262 KEINPDVFTFYALIKGFVNEGNLEEAKRW---YNKSGCGMNKAIFKLLVPFVCEKGDLDF 318
K + ++FT+ +LI G GNLE+A R +++G + + ++ +C+ +LD
Sbjct: 489 KGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDR 548
Query: 319 AFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
A +L + + ++++ RVE K L+E
Sbjct: 549 AHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLE 589
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 18/171 (10%)
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
+ GI P S N ++ LD A L E+ +K + ++N LL + GR
Sbjct: 219 QYGISPSPESCNAVLCRL----PLDEAVQLFQELPEK----NTCSYNILLKALCTAGRIK 270
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM--RSKEINPDVFTFYA 273
DA ++++ M + P+V +Y + G + + A++L+ EM R E+NP +T +
Sbjct: 271 DAHQLFDEMAS---PPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYT--S 325
Query: 274 LIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFN 321
+I +EG + +A R G ++ A+F ++ C KGDL A N
Sbjct: 326 VIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARN 376
>gi|326504498|dbj|BAJ91081.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 793
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 128/263 (48%), Gaps = 4/263 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI+ + A+++ A KVFDEM E ++FN+LL ++ DE G+ K++
Sbjct: 255 LISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSLLDVYGKARMHDEAIGVLKEM-ELG 313
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G P +V+YN++I ++V G L A L EME KGI+ D+IT+ TL+ G G+ A
Sbjct: 314 GCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEVKGIQPDVITYTTLISGLDRAGKIDAA 373
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ M+ +PN+ +YNA + + + + + + ++RS PDV T+ L+
Sbjct: 374 IGTYDEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMAVFDDLRSAGFVPDVVTWNTLLAV 433
Query: 278 FVNEGNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
F G E + KSG + + L+ G D + + KR D
Sbjct: 434 FGQNGLDSEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQSMEIYKRMIEAGIYPD 493
Query: 335 QAPLQLVVDRLAKELRVEEAKEL 357
+ V+ LA+ R E+A++L
Sbjct: 494 ISTYNAVLSALARGGRWEQAEKL 516
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 106/210 (50%), Gaps = 2/210 (0%)
Query: 80 LEHQKQYKDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACV 138
L+ + + K I + T LI+ +A + A +DEM C+ + ++NAL+
Sbjct: 341 LKEEMEVKGIQPDVITYTTLISGLDRAGKIDAAIGTYDEMLRNGCKPNLCTYNALIKLHG 400
Query: 139 NSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL 198
KF E+ +F DL G PD+V++NT++ F G + + EM+K G +
Sbjct: 401 VRGKFPEMMAVFDDL-RSAGFVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKSGYVPER 459
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
T+ +L+ + G F + +I++ M+ + P++ +YNA L LA + ++A +L E
Sbjct: 460 DTYVSLISSYSRCGLFDQSMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAE 519
Query: 259 MRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
M + + PD ++ +L+ + N L++ K
Sbjct: 520 MENLDCRPDELSYSSLLHAYANAKKLDKMK 549
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 74/143 (51%), Gaps = 1/143 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
++++YGK M + ++ M G + + ++N+L+ ++ + + ++
Sbjct: 605 MVSVYGKNRMVKKVEEILSLMKGSSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSS- 663
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G PD SYNT+I A+ KG + A+ L EM+ G+ D++T+N + + +N F +A
Sbjct: 664 GARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKSSGLIPDIVTYNIFVKSYVANSMFEEA 723
Query: 218 EKIWETMVNMNVRPNVRSYNARL 240
+ MV +PN R+YN+ L
Sbjct: 724 IDLVRYMVTRGCKPNERTYNSIL 746
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 105/234 (44%), Gaps = 7/234 (2%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMP 119
Y+ + ANAK+ ++ + E K S G L+ + K K F E+
Sbjct: 532 YSSLLHAYANAKKLDKMKALSEDIYAEKIESHHGLVKTLVLVNSKVNNLSETEKAFLELG 591
Query: 120 GRNCEQTVLSFNALL---GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDK 176
R C + NA++ G KK +E+ L K I +YN+++ +
Sbjct: 592 RRRCSLDINVLNAMVSVYGKNRMVKKVEEILSLMKGS----SINLSTATYNSLMHMYSRL 647
Query: 177 GSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSY 236
G + +L E++ G R D ++NT++ + G+ +A +++ M + + P++ +Y
Sbjct: 648 GDCEKCENILTEIKSSGARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKSSGLIPDIVTY 707
Query: 237 NARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
N + ++A++LV M ++ P+ T+ ++++ + G + +AK +
Sbjct: 708 NIFVKSYVANSMFEEAIDLVRYMVTRGCKPNERTYNSILQEYCRHGKIADAKSF 761
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 126/280 (45%), Gaps = 15/280 (5%)
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
Y DIS + A L AL + +E A K+F EM +C LS+++LL A N+KK D+
Sbjct: 491 YPDIST--YNAVLSAL-ARGGRWEQAEKLFAEMENLDCRPDELSYSSLLHAYANAKKLDK 547
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGS----LDSANTLLYEMEKKGIRLDLITF 201
+ L +D+ + IE S++ ++K V S L E+ ++ LD+
Sbjct: 548 MKALSEDI-YAEKIE----SHHGLVKTLVLVNSKVNNLSETEKAFLELGRRRCSLDINVL 602
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS 261
N ++ + N E+I M ++ + +YN+ + + +K ++ E++S
Sbjct: 603 NAMVSVYGKNRMVKKVEEILSLMKGSSINLSTATYNSLMHMYSRLGDCEKCENILTEIKS 662
Query: 262 KEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDF 318
PD +++ +I + +G ++EA R +++ SG + + + V +
Sbjct: 663 SGARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKSSGLIPDIVTYNIFVKSYVANSMFEE 722
Query: 319 AFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
A +L + + C ++ ++ + ++ +AK +
Sbjct: 723 AIDLVRYMVTRGCKPNERTYNSILQEYCRHGKIADAKSFL 762
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 80/165 (48%), Gaps = 2/165 (1%)
Query: 124 EQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKG-SLDSA 182
E ++ AL+ A + +F + +F+ + GI+P +V+YN ++ +
Sbjct: 175 EPDASAYTALVSAFSRASRFRDAVAVFRRMVAN-GIQPAIVTYNVVLHVYSKIAVPWKDV 233
Query: 183 NTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDG 242
L+ M+ GI LD T+NTL+ + +A K+++ M P+ ++N+ LD
Sbjct: 234 VALVDSMKNDGIPLDRYTYNTLISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSLLDV 293
Query: 243 LAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+ +A+ ++ EM P V T+ +LI +V +G L+EA
Sbjct: 294 YGKARMHDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEA 338
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 87/199 (43%), Gaps = 8/199 (4%)
Query: 33 KENNLKRLVDKFKKSSDLGRFRT--NTGIYTGTVQRLANAKRFRWIEEILEHQKQYK-DI 89
K NNL F +LGR R + + V + + +EEIL K ++
Sbjct: 576 KVNNLSETEKAFL---ELGRRRCSLDINVLNAMVSVYGKNRMVKKVEEILSLMKGSSINL 632
Query: 90 SKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGL 149
S + + L+ +Y + E + E+ S+N ++ A + E L
Sbjct: 633 STATYNS-LMHMYSRLGDCEKCENILTEIKSSGARPDRYSYNTMIYAYGRKGQMKEASRL 691
Query: 150 FKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFY 209
F ++ G+ PD+V+YN +K++V + A L+ M +G + + T+N++L +
Sbjct: 692 FSEMKSS-GLIPDIVTYNIFVKSYVANSMFEEAIDLVRYMVTRGCKPNERTYNSILQEYC 750
Query: 210 SNGRFADAEKIWETMVNMN 228
+G+ ADA+ + ++
Sbjct: 751 RHGKIADAKSFLSNLPQLH 769
>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
Length = 703
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 131/286 (45%), Gaps = 51/286 (17%)
Query: 80 LEHQKQYKDISKEGFTARLIAL--YGKAAMFENARKVFDEMPG-RNCEQTVLSFNALLGA 136
L H+ ++ + +A L+ L + +A M + A F +P C + S NALL A
Sbjct: 75 LRHRPRFSE------SAALVVLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDA 128
Query: 137 CVNSKKFDEVDGLFKDLPH-KLG--IEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKG 193
V +++F + D F L H G I P+L +YN ++++ +G LD A TL + ++
Sbjct: 129 FVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQ 188
Query: 194 IRLDLITFNTLLLGF-----------------------------------YSNGRFADAE 218
+ D IT++TL+ G + G F
Sbjct: 189 VAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVM 248
Query: 219 KIWETMV-NMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++W+ +V + RPN+ +YN LDGL + K+ E+ M + + PDV T+ LI G
Sbjct: 249 RVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHG 308
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAF 320
G+++ A R Y+ K+G ++ A++ LV C+ G + A+
Sbjct: 309 LCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAW 354
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 125/269 (46%), Gaps = 19/269 (7%)
Query: 26 SVIRGIYKENNLKRLVDKFK--KSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQ 83
S+I G+ N+ RLVD K + D + N+ IY + R +
Sbjct: 444 SMINGLC---NVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTS------DAV 494
Query: 84 KQYKDISKEGFTARLIAL------YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGAC 137
+ Y ++ G + +I KA ++ A V EM + ++ +L+
Sbjct: 495 RIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGL 554
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEM-EKKGIRL 196
+ KK D+ ++K + +K G++ D++ +N +I G +D A + +M EKK
Sbjct: 555 FSDKKIDDALSIWKQILYK-GLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPP 613
Query: 197 DLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELV 256
+L+T+NTL+ G Y G A +W ++ + P++ SYN R+ GL + + ++L+
Sbjct: 614 NLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLL 673
Query: 257 GEMRSKEINPDVFTFYALIKGFVNEGNLE 285
E+ S+ I P V T+ L++ + G ++
Sbjct: 674 DEVLSRGIIPTVITWNILVRAVIKYGPIQ 702
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 139/350 (39%), Gaps = 79/350 (22%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEV----DGLFKDL 153
L+ K ++A + DEMP + V+ +NALLG C + +F++V D L KD
Sbjct: 199 LMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDP 258
Query: 154 ---PH------------KLG----------------IEPDLVSYNTIIKAFVDKGSLDSA 182
P+ K G ++PD+++Y +I G +D A
Sbjct: 259 GARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGA 318
Query: 183 NTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDG 242
+ E+ K G+ +D +N+L+ GF GR +A K W++ +R N+R+YN + G
Sbjct: 319 ARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKG 377
Query: 243 L--------AIEKQ----------------------------TKKALELVGEMRSKEINP 266
L AIE KA + E R
Sbjct: 378 LFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQL 437
Query: 267 DVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLC 323
DVF++ ++I G N G L +A + Y +K GC N I+ L+ C+ A +
Sbjct: 438 DVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIY 497
Query: 324 KRTFSERCLVDQAPLQLVVDRLAKELRVEE----AKELVELGKTNSYCRY 369
+ C ++D L K + +E A+E+VE G T Y
Sbjct: 498 SKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTY 547
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 125/266 (46%), Gaps = 7/266 (2%)
Query: 25 GSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQK 84
G++I G+ + + F+++ G+ + + Y+ + L N R ++ + ++K
Sbjct: 408 GTLIHGLCQNGFANKAFTIFEEARVSGK-QLDVFSYSSMINGLCNVGRL--VDAVKVYEK 464
Query: 85 QYKDISKEG--FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKK 142
KD K LI+ + + +A +++ +M C TV+++N L+ ++K
Sbjct: 465 MDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEK 524
Query: 143 FDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFN 202
+ E + +++ G PD+ +Y ++I+ +D A ++ ++ KG+++D++ N
Sbjct: 525 YQEASSVAREMVEN-GFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHN 583
Query: 203 TLLLGFYSNGRFADAEKIWETMVNM-NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS 261
L+ G S G+ +A ++ M N PN+ +YN +DGL KA L +
Sbjct: 584 ILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITE 643
Query: 262 KEINPDVFTFYALIKGFVNEGNLEEA 287
+ PD+ ++ IKG + + E
Sbjct: 644 DGLEPDIISYNTRIKGLCSCDRIHEG 669
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 127/297 (42%), Gaps = 10/297 (3%)
Query: 84 KQYKDISKEGFTA------RLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGAC 137
+ Y +I K G L+ + +A + A K +D G + + ++N ++
Sbjct: 320 RVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSA-GFAGLRNLRTYNIMIKGL 378
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLD 197
+S DE L+ L + PD V++ T+I G + A T+ E G +LD
Sbjct: 379 FDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLD 438
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
+ ++++++ G + GR DA K++E M +PN YNA + G +T A+ +
Sbjct: 439 VFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYS 498
Query: 258 EMRSKEINPDVFTFYALIKGFVNEGNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKG 314
+M +P V T+ LI G +EA R ++G + + L+ +
Sbjct: 499 KMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDK 558
Query: 315 DLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKTNSYCRYNL 371
+D A ++ K+ + VD +++ L +V+EA + K C NL
Sbjct: 559 KIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNL 615
>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
Length = 799
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 100/183 (54%), Gaps = 1/183 (0%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A ++ EM + E + ++N+L+ + ++ D+ + G++PD+ +Y TII
Sbjct: 479 ANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDM-DEAGLKPDVYTYTTII 537
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
A LD A++LL EM KGI+ ++T+N L+ GF +GR +++ E M+ N+
Sbjct: 538 GALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIH 597
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
PN +YN+ + IEK K E+ M S+E+ P+ T+ LIKG N++EA +
Sbjct: 598 PNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYF 657
Query: 291 YNK 293
+++
Sbjct: 658 HSE 660
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 143/341 (41%), Gaps = 40/341 (11%)
Query: 56 NTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVF 115
NT Y ++ L A R + ++ + D+ G ++ Y + E A K+
Sbjct: 252 NTCSYNILLKALCTAGRIKDAHQLFDEMASPPDVVTYGI---MVHGYCTLSELETAIKLL 308
Query: 116 DEMPGRNCEQTVLSFNALL----------------------GACVNSKKFDEVDGLFK-- 151
EM R E +++ +++ G +++ F V F
Sbjct: 309 SEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRK 368
Query: 152 ----------DLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITF 201
D K G+ D V+Y +I G L A +L EME KG+ +D +T+
Sbjct: 369 GDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTY 428
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS 261
L+ G+ G+ +A + MV V PNV +Y A DGL + A EL+ EM S
Sbjct: 429 TVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCS 488
Query: 262 KEINPDVFTFYALIKGFVNEGNLEEAKRW---YNKSGCGMNKAIFKLLVPFVCEKGDLDF 318
K + ++FT+ +LI G GNLE+A R +++G + + ++ +C+ +LD
Sbjct: 489 KGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDR 548
Query: 319 AFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
A +L + + ++++ RVE K L+E
Sbjct: 549 AHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLE 589
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 18/171 (10%)
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
+ GI P S N ++ LD A L E+ +K + ++N LL + GR
Sbjct: 219 QYGISPSPESCNAVLCRL----PLDEAVQLFQELPEK----NTCSYNILLKALCTAGRIK 270
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM--RSKEINPDVFTFYA 273
DA ++++ M + P+V +Y + G + + A++L+ EM R E+NP +T +
Sbjct: 271 DAHQLFDEMAS---PPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYT--S 325
Query: 274 LIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFN 321
+I +EG + +A R G ++ A+F ++ C KGDL A N
Sbjct: 326 VIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARN 376
>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63080, mitochondrial; Flags: Precursor
gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 614
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 165/351 (47%), Gaps = 16/351 (4%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRF----RWIEEILE 81
+VI + K ++ ++ F + + G R + Y+ + L N R+ R + ++LE
Sbjct: 245 TVIDSLCKYRHVDDALNLFTEMDNKG-IRPDVFTYSSLISCLCNYGRWSDASRLLSDMLE 303
Query: 82 HQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSK 141
+ ++ F + LI + K A K+FDEM R+ + ++++N+L+
Sbjct: 304 RKINPNVVT---FNS-LIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHD 359
Query: 142 KFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITF 201
+ DE +F + K + PD+V+YNT+I F + L +M ++G+ + +T+
Sbjct: 360 RLDEAQQIFTLMVSKDCL-PDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTY 418
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS 261
TL+ GF+ +A+ +++ MV+ V PN+ +YN LDGL + +KA+ + ++
Sbjct: 419 TTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQK 478
Query: 262 KEINPDVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDF 318
++ PD++T+ + +G G +E+ + + G + + ++ C+KG +
Sbjct: 479 SKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEE 538
Query: 319 AFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKTNSYCRY 369
A+ L + + L D ++ LR + EL K CR+
Sbjct: 539 AYTLFIKMKEDGPLPDSGTYNTLI---RAHLRDGDKAASAELIKEMRSCRF 586
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 128/252 (50%), Gaps = 4/252 (1%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A + ++M E V+ ++ ++ + + D+ LF ++ +K GI PD+ +Y+++I
Sbjct: 224 ALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNK-GIRPDVFTYSSLI 282
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
+ G A+ LL +M ++ I +++TFN+L+ F G+ +AEK+++ M+ ++
Sbjct: 283 SCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSID 342
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
PN+ +YN+ ++G + + +A ++ M SK+ PDV T+ LI GF + +
Sbjct: 343 PNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMEL 402
Query: 291 Y---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAK 347
+ ++ G N + L+ + D D A + K+ S+ + ++D L K
Sbjct: 403 FRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCK 462
Query: 348 ELRVEEAKELVE 359
++E+A + E
Sbjct: 463 NGKLEKAMVVFE 474
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 115/250 (46%), Gaps = 4/250 (1%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A + D+M + ++F L+ K E L + + K G +PDLV+Y +I
Sbjct: 154 AVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVK-GCQPDLVTYGAVI 212
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
+G D A LL +MEK I D++ ++T++ DA ++ M N +R
Sbjct: 213 NGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIR 272
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
P+V +Y++ + L + A L+ +M ++INP+V TF +LI F EG L EA++
Sbjct: 273 PDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKL 332
Query: 291 YN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAK 347
++ + N + L+ C LD A + S+ CL D +++ K
Sbjct: 333 FDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCK 392
Query: 348 ELRVEEAKEL 357
+V + EL
Sbjct: 393 AKKVVDGMEL 402
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 103/218 (47%), Gaps = 4/218 (1%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
+ A +F EM +++ F+ LL A KKFD V F + LG+ +L +YN
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVIS-FGEKMEILGVSHNLYTYN 104
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
+I + L A +L +M K G ++T N+LL GF R ++A + + MV M
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+P+ ++ + GL + +A+ LV M K PD+ T+ A+I G G + A
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 288 KRWYNKSGCGMNKA---IFKLLVPFVCEKGDLDFAFNL 322
NK G +A I+ ++ +C+ +D A NL
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNL 262
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 105/217 (48%), Gaps = 8/217 (3%)
Query: 77 EEILEHQKQYKDISKEGFTAR------LIALYGKAAMFENARKVFDEMPGRNCEQTVLSF 130
+++++ + ++D+S+ G LI + +A+ +NA+ VF +M ++++
Sbjct: 394 KKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTY 453
Query: 131 NALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEME 190
N LL + K ++ +F+ L K +EPD+ +YN + + G ++ L +
Sbjct: 454 NTLLDGLCKNGKLEKAMVVFEYL-QKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLS 512
Query: 191 KKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTK 250
KG++ D+I +NT++ GF G +A ++ M P+ +YN + +
Sbjct: 513 LKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKA 572
Query: 251 KALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+ EL+ EMRS D T Y L+ +++G L++
Sbjct: 573 ASAELIKEMRSCRFAGDAST-YGLVTDMLHDGRLDKG 608
>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 822
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 134/285 (47%), Gaps = 10/285 (3%)
Query: 86 YKDISKEGFTARLI---ALYGKAAM---FENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
Y + KEG + AL + + F A K+F M G ++N ++
Sbjct: 361 YHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCL 420
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
++ LF+ + K+G P +V+YNT+I ++ KG++++A LL M++ G D
Sbjct: 421 GGDIEKAMVLFEKML-KMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEW 479
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
T+N L+ GF G+ A ++ MV + PN SY A +DG + + + AL L+ M
Sbjct: 480 TYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRM 539
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDL 316
NP+V ++ A+I G E EA++ +K G N + L+ +C G
Sbjct: 540 EEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRT 599
Query: 317 DFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELG 361
FAF + +CL + ++ L +E + +EA+ + E+G
Sbjct: 600 QFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAERMSEIG 644
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 110/217 (50%), Gaps = 2/217 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI Y NA ++ D M CE ++N L+ K + F+++ +
Sbjct: 449 LINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMV-EC 507
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ P+ VSY +I G +D A +LL ME+ G ++ ++N ++ G RF++A
Sbjct: 508 GLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEA 567
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
EKI + MV + PNV +Y +DGL +T+ A ++ +M ++ P+++T+ +LI G
Sbjct: 568 EKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYG 627
Query: 278 FVNEGNLEEAKRWYNKSGCGMNKAIFKLLVPFVCEKG 314
EG +EA+R ++ GC + LV +C KG
Sbjct: 628 LCQEGKADEAER-MSEIGCEPTLDTYSTLVSGLCRKG 663
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 118/266 (44%), Gaps = 10/266 (3%)
Query: 66 RLANAKRFRWIEEILEHQKQYKDISKEGF------TARLIALYGKAAMFENARKVFDEMP 119
R+ K R EEI +IS GF L+ K M E AR ++ +M
Sbjct: 131 RILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQML 190
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL 179
+ ++L+FN L+ K E + + + + + PD+ +Y ++I +L
Sbjct: 191 NSGIQPSLLTFNTLINILSKKGKVREAELILSQI-FQYDLSPDVFTYTSLILGHCRNRNL 249
Query: 180 DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNAR 239
D A + M K+G + +T++TL+ G + GR +A + E M+ + P V +Y
Sbjct: 250 DLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLP 309
Query: 240 LDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGC 296
+ L + ++A+ELV M+ + P+V T+ ALI G G LE A Y+ K G
Sbjct: 310 ITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGL 369
Query: 297 GMNKAIFKLLVPFVCEKGDLDFAFNL 322
N + L+ +C G A +
Sbjct: 370 VPNTVTYNALINELCVGGRFSTALKI 395
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 133/276 (48%), Gaps = 9/276 (3%)
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
+TA LI + K + A + M C V S+NA++ +F E + + +
Sbjct: 516 YTA-LIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKM 574
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
+ G+ P++++Y T+I G A + ++MEK+ +L T+++L+ G G+
Sbjct: 575 VEQ-GLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGK 633
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
+AE++ E + P + +Y+ + GL + + +A +LV +M+ + PD +Y+
Sbjct: 634 ADEAERMSE----IGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYS 689
Query: 274 LIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSER 330
L+ ++ A + ++ G ++ +I++ L+ +C+ G ++ A L +
Sbjct: 690 LLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKE 749
Query: 331 CLVDQAPLQLVVDRLAKELRVEEAKELVELGKTNSY 366
D+ ++VD L KE ++ +L+ + ++ ++
Sbjct: 750 WNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNF 785
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 113/265 (42%), Gaps = 6/265 (2%)
Query: 21 PKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEIL 80
P ++I G K+ + + K+ ++G N Y + L+ RF E+I
Sbjct: 513 PVSYTALIDGHSKDGKVDIALSLLKRMEEMG-CNPNVESYNAVINGLSKENRFSEAEKIC 571
Query: 81 EHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNS 140
+ + + LI + + A K+F +M R C + ++++L+
Sbjct: 572 DKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQE 631
Query: 141 KKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLIT 200
K DE + + ++G EP L +Y+T++ KG A L+ +M+++G D
Sbjct: 632 GKADEAERM-----SEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREI 686
Query: 201 FNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMR 260
+ +LL+ N A KI+ ++ + ++ Y A + L Q ++A L M
Sbjct: 687 YYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNML 746
Query: 261 SKEINPDVFTFYALIKGFVNEGNLE 285
KE N D + L+ G + EG L+
Sbjct: 747 EKEWNADEIVWTVLVDGLLKEGELD 771
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 109/252 (43%), Gaps = 12/252 (4%)
Query: 26 SVIRGIYKENNL---KRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEH 82
+VI G+ KEN +++ DK + L N YT + L R ++ +I
Sbjct: 553 AVINGLSKENRFSEAEKICDKMVEQGLL----PNVITYTTLIDGLCRNGRTQFAFKIFHD 608
Query: 83 QKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKK 142
++ K + + LI YG E + M CE T+ +++ L+ +
Sbjct: 609 MEKRKCLPNLYTYSSLI--YGLCQ--EGKADEAERMSEIGCEPTLDTYSTLVSGLCRKGR 664
Query: 143 FDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFN 202
F E + L KD+ + G PD Y +++ A +D A + + +E KG +L L +
Sbjct: 665 FYEAEQLVKDMKER-GFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYR 723
Query: 203 TLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
L+ G+ +A+ +++ M+ + + +DGL E + ++L+ M SK
Sbjct: 724 ALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESK 783
Query: 263 EINPDVFTFYAL 274
P++ T+ L
Sbjct: 784 NFTPNIQTYVIL 795
>gi|302755296|ref|XP_002961072.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
gi|300172011|gb|EFJ38611.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
Length = 628
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 150/330 (45%), Gaps = 9/330 (2%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
S+I G+ K N + FK + G ++ Y+ + L+ A R ++E+LEH +
Sbjct: 227 SIISGLCKANRIDDAFQVFKGMLERGCV-PDSLTYSIMLDNLSRANRLDTVDEVLEHMQA 285
Query: 86 YK-DISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKF 143
K E +T I ++ F A+ + M +LS+N ++ S
Sbjct: 286 MKAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNV 345
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRL-DLITFN 202
D+ L + + +PD++ +NT+I F G L A+ LL EM+ K I + D++T+N
Sbjct: 346 DDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYN 405
Query: 203 TLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
TL+ G G A+ + + M + +PNV +Y A ++G A ++A L EM +K
Sbjct: 406 TLIDGQSKFGSLKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAK 465
Query: 263 EINPDVFTFYALIKGFVNEGNLEEAKRWYNK-----SGCGMNKAIFKLLVPFVCEKGDLD 317
PD+ T+ ++ F G + +A+ Y + S C + +++L+ C D +
Sbjct: 466 GCFPDIITYNTVLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTE 525
Query: 318 FAFNLCKRTFSERCLVDQAPLQLVVDRLAK 347
L + + D +++ +LA+
Sbjct: 526 QGLTLLQEMTARGWSCDSYTYNVLIAKLAE 555
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 119/253 (47%), Gaps = 8/253 (3%)
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRN-CEQTVLSFNALLGACVNSKKFDEVDGLFKD 152
F LI+ + KA A ++ EM +N C V+++N L+ + L ++
Sbjct: 367 FFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQE 426
Query: 153 LPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNG 212
+ +G +P++V+Y +I + G + A +L EM KG D+IT+NT+L F G
Sbjct: 427 M-QAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAG 485
Query: 213 RFADAEKIWETMVNMN--VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
+ AE +++ + N P+ +Y +DG + T++ L L+ EM ++ + D +T
Sbjct: 486 MMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARGWSCDSYT 545
Query: 271 FYALIKGFV-NEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRT 326
+ LI E +A Y + C + +IF LV GD++ A ++ +
Sbjct: 546 YNVLIAKLAETEEVPSKALAVYQQMLDQDCVPSASIFNSLVRLFLRTGDVNSARSMVQEM 605
Query: 327 FSERCLVDQAPLQ 339
+ LVD + L+
Sbjct: 606 NEKGHLVDASNLE 618
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 121/271 (44%), Gaps = 15/271 (5%)
Query: 108 FENARKVFDEMP--GRNCEQTVLSFNALLGAC---VNSKKFDEVDGLFKDLPHKLGIEPD 162
+ AR + EM G C V+ + + G C S +++ DG D + G PD
Sbjct: 131 LDQARGLIREMILRGSVC-NLVVYIDCIFGFCEARCQSSRYECRDG---DEMIESGRIPD 186
Query: 163 LVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWE 222
+V+YNT I G LD +L EM++ GI D++TF +++ G R DA ++++
Sbjct: 187 VVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQVFK 246
Query: 223 TMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINP--DVFTFYALIKGFVN 280
M+ P+ +Y+ LD L+ + E++ M++ + +V+T A I
Sbjct: 247 GMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGALCR 306
Query: 281 EGNLEEAKR---WYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCL-VDQA 336
G AK +SG N + ++ +C+ G++D A+ L ++ C D
Sbjct: 307 SGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVI 366
Query: 337 PLQLVVDRLAKELRVEEAKELVELGKTNSYC 367
++ K R+ +A +L+ K + C
Sbjct: 367 FFNTLISGFCKAGRLSQAHQLLIEMKAKNIC 397
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 113/262 (43%), Gaps = 8/262 (3%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEPD 162
K+ + A+ + +M C V+++ AL+ G C + D + + + L + G EPD
Sbjct: 22 KSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRML--RSGCEPD 79
Query: 163 LVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWE 222
LV+YN++I +D A +L E+ + G + IT++TL++ R A +
Sbjct: 80 LVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTLVIWNCRRRRLDQARGLIR 139
Query: 223 TMVNMNVRPNVRSYNARLDGLAIEKQTKKALEL--VGEMRSKEINPDVFTFYALIKGFVN 280
M+ N+ Y + G + E EM PDV T+ I G
Sbjct: 140 EMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIESGRIPDVVTYNTFISGLCK 199
Query: 281 EGNLE---EAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAP 337
G L+ E ++ G + F ++ +C+ +D AF + K C+ D
Sbjct: 200 AGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLT 259
Query: 338 LQLVVDRLAKELRVEEAKELVE 359
+++D L++ R++ E++E
Sbjct: 260 YSIMLDNLSRANRLDTVDEVLE 281
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 3/137 (2%)
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
M G ++T+ TL+ G +G A+ + + M + PNV +Y A +DGL ++
Sbjct: 1 MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARR 60
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKL 305
A++ V M PD+ T+ +LI G +++A ++G N +
Sbjct: 61 PHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYST 120
Query: 306 LVPFVCEKGDLDFAFNL 322
LV + C + LD A L
Sbjct: 121 LVIWNCRRRRLDQARGL 137
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 62/131 (47%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G + +V+Y T+I G LD+A LL +M G +++T+ L+ G R DA
Sbjct: 5 GYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDA 64
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ + M+ P++ +YN+ + GL + + A ++ E+ P+ T+ L+
Sbjct: 65 IQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTLVIW 124
Query: 278 FVNEGNLEEAK 288
L++A+
Sbjct: 125 NCRRRRLDQAR 135
>gi|297840249|ref|XP_002888006.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297333847|gb|EFH64265.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 485
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 147/303 (48%), Gaps = 8/303 (2%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARL-IALYGKAAMFENARKVFDEM 118
++ + +A +K + + + H + I + +T + I + + F A V +M
Sbjct: 72 FSKLLSNIAKSKNYDLVISLF-HNMEICGIGHDLYTYNIVINCLCRCSRFVIALSVVGKM 130
Query: 119 PGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKG 177
E V++ ++L+ G C ++ F VD + K ++ + D+V YNTII F G
Sbjct: 131 MKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSK--MEEMRCKLDVVIYNTIIDGFCKTG 188
Query: 178 SLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYN 237
+++A L ME+ G+R D +T+N+L+ G +GR +DA ++ MV ++ PNV ++
Sbjct: 189 LVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVITFT 248
Query: 238 ARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KS 294
A ++ E + +A + EM + I+PDVFT+ ++I G G ++EAK+ +
Sbjct: 249 ALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTK 308
Query: 295 GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA 354
GC + + L+ C+ +D L + +VD ++ + R + A
Sbjct: 309 GCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAA 368
Query: 355 KEL 357
+E+
Sbjct: 369 QEI 371
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 108/235 (45%), Gaps = 40/235 (17%)
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
FTA LI + + F A+K ++EM R + V ++N+++ + DE + DL
Sbjct: 247 FTA-LINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQIL-DL 304
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
G PD+V+YNT+I F +D L+ EM ++G+ +D +TFNT++ G++ GR
Sbjct: 305 MVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGR 364
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE---------- 263
A++I+ M RPN+R+Y+ L GL + +KAL L M+ E
Sbjct: 365 PDAAQEIFS---RMGSRPNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDITTYNI 421
Query: 264 -------------------------INPDVFTFYALIKGFVNEGNLEEAKRWYNK 293
+ PDV T+ +I GF + ++A Y K
Sbjct: 422 VIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKRLWDKADFLYRK 476
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 127/261 (48%), Gaps = 3/261 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHK 156
+I + K + NA +F M +++N+L+ G C + ++ D L +D+ +
Sbjct: 180 IIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAAR-LMRDMVMR 238
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
I P+++++ +I AFV +G A EM ++ I D+ T+N+++ G +G+ +
Sbjct: 239 -DIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDE 297
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
A++I + MV P+V +YN ++G K+ + +LV EM + + D TF +I+
Sbjct: 298 AKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQ 357
Query: 277 GFVNEGNLEEAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQA 336
G+ G + A+ +++ G N + +L+ +C ++ A L + +D
Sbjct: 358 GYFQAGRPDAAQEIFSRMGSRPNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDIT 417
Query: 337 PLQLVVDRLAKELRVEEAKEL 357
+V+ + VE+A +L
Sbjct: 418 TYNIVIHGMCMIGNVEDAWDL 438
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 89/200 (44%), Gaps = 36/200 (18%)
Query: 99 IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLG 158
+ ++G+ + A+++ D M + C V+++N L+ +K+ DE L +++ + G
Sbjct: 289 LCMHGQV---DEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQR-G 344
Query: 159 IEPDLVSYNTIIKAFVDKGSLDSA----------------NTLLY--------------- 187
+ D V++NTII+ + G D+A + LLY
Sbjct: 345 LVVDTVTFNTIIQGYFQAGRPDAAQEIFSRMGSRPNIRTYSILLYGLCYNWRVEKALVLF 404
Query: 188 -EMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIE 246
M+K + LD+ T+N ++ G G DA ++ ++ + P+V +Y + G +
Sbjct: 405 ESMQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRK 464
Query: 247 KQTKKALELVGEMRSKEINP 266
+ KA L +M+ + P
Sbjct: 465 RLWDKADFLYRKMQEDGLLP 484
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 90/223 (40%), Gaps = 4/223 (1%)
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
S DE LF ++ + P +V ++ ++ + D +L + ME GI DL
Sbjct: 47 SMNLDEAIDLFCNMIQSRPL-PSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLY 105
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
T+N ++ RF A + M+ P+V + ++ ++G + A++LV +M
Sbjct: 106 TYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKM 165
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDL 316
DV + +I GF G + A + + G + + LV +C G
Sbjct: 166 EEMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRR 225
Query: 317 DFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
A L + + + +++ +E + EAK+ E
Sbjct: 226 SDAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYE 268
>gi|255660950|gb|ACU25644.1| pentatricopeptide repeat-containing protein [Casselia glaziovii]
Length = 481
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 117/237 (49%), Gaps = 5/237 (2%)
Query: 92 EGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFK 151
E +I YGK + + + K+F +M E+T+ S++AL + +F F
Sbjct: 80 EDLWVLMIDSYGKKGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRGRFMMAKRYFN 139
Query: 152 DLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSN 211
+ ++ GIEP ++N +I F G +++AN +M+ + I D+IT+NTL+ G+Y
Sbjct: 140 KMLNE-GIEPTRHTFNVMIWGFFLSGKVETANXFFEDMKSRDITPDVITYNTLINGYYRV 198
Query: 212 GRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTF 271
+ +AE+ + M N+ P V +Y + G + AL L+ EM+ I P+ T+
Sbjct: 199 KKMEEAERYFVEMKGRNIEPTVITYTTLIKGYVSVDRVDDALSLMEEMKGFGIKPNAITY 258
Query: 272 YALIKGFVNEGNLEEA----KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCK 324
L+ G N + EA K +K + +IF L+ C+ G+LD A ++ K
Sbjct: 259 STLLPGLCNAEKMSEAQSILKEMVDKYIAPTDNSIFLKLISGQCKAGNLDAAADVLK 315
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 84/167 (50%), Gaps = 4/167 (2%)
Query: 125 QTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANT 184
+T L +LG + K + + D+P K G+E D + +I ++ KG + +
Sbjct: 46 ETHLKIIEILG---RASKLNHARCILLDMPKK-GLEWDEDLWVLMIDSYGKKGIVQESVK 101
Query: 185 LLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLA 244
L +ME+ G+ + +++ L GRF A++ + M+N + P ++N + G
Sbjct: 102 LFQKMEELGVERTIKSYDALFKVILRRGRFMMAKRYFNKMLNEGIEPTRHTFNVMIWGFF 161
Query: 245 IEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY 291
+ + + A +M+S++I PDV T+ LI G+ +EEA+R++
Sbjct: 162 LSGKVETANXFFEDMKSRDITPDVITYNTLINGYYRVKKMEEAERYF 208
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 104/246 (42%), Gaps = 47/246 (19%)
Query: 87 KDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
+DI+ + T LI Y + E A + F EM GRN E TV+++ L+ V+ + D+
Sbjct: 179 RDITPDVITYNTLINGYYRVKKMEEAERYFVEMKGRNIEPTVITYTTLIKGYVSVDRVDD 238
Query: 146 VDGLFKDLPHKLGIEPDLVSYNT----------------IIKAFVDK------------- 176
L +++ GI+P+ ++Y+T I+K VDK
Sbjct: 239 ALSLMEEM-KGFGIKPNAITYSTLLPGLCNAEKMSEAQSILKEMVDKYIAPTDNSIFLKL 297
Query: 177 -------GSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
G+LD+A +L M + + + + L+ + ++ A + + ++ ++
Sbjct: 298 ISGQCKAGNLDAAADVLKAMIRLSVPTEAGHYGVLIENYCKAEKYDKAVNLLDKLIEKDI 357
Query: 230 --RPNV------RSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
RP +YN ++ L QT KA LV ++ + + LI+G E
Sbjct: 358 ILRPQSTLHMEPSAYNPMIEYLCDNGQTAKAETLVRQLMKLGVQ-EPTALNTLIRGHSQE 416
Query: 282 GNLEEA 287
G+ + A
Sbjct: 417 GSPDSA 422
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 88/204 (43%), Gaps = 17/204 (8%)
Query: 37 LKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTA 96
LK +VDK+ +D I+ + A ++L+ + ++ G
Sbjct: 278 LKEMVDKYIAPTD-------NSIFLKLISGQCKAGNLDAAADVLKAMIRLSVPTEAGHYG 330
Query: 97 RLIALYGKAAMFENARKVFDEM--------PGRNCEQTVLSFNALLGACVNSKKFDEVDG 148
LI Y KA ++ A + D++ P ++N ++ ++ + + +
Sbjct: 331 VLIENYCKAEKYDKAVNLLDKLIEKDIILRPQSTLHMEPSAYNPMIEYLCDNGQTAKAET 390
Query: 149 LFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
L + L KLG++ + + NT+I+ +GS DSA LL M ++ + + +++L+ +
Sbjct: 391 LVRQL-MKLGVQ-EPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYDSLVQSY 448
Query: 209 YSNGRFADAEKIWETMVNMNVRPN 232
ADA+ ++M+ P+
Sbjct: 449 LKKNEPADAKAALDSMIENGHLPD 472
>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 162/386 (41%), Gaps = 46/386 (11%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
+I + KE LK+ D F + + N Y V ++ R + IL K+
Sbjct: 227 MINVLCKEGKLKKAKD-FVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQ 285
Query: 87 KDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
K I + FT LI+ K E A K+F+EM + + + +N L+ N D
Sbjct: 286 K-IEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDM 344
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
+KD K GI P + +YN++I A + D A ++ E+++KGI D IT+N L+
Sbjct: 345 ASA-YKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILI 403
Query: 206 LGF---------------------------YSN--------GRFADAEKIWETMVNMNVR 230
G+ Y++ R +A+ +++ + + V
Sbjct: 404 NGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVL 463
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
P+ +NA +DG K A EL+ +M ++ PD TF +++G EG +EEA+
Sbjct: 464 PDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEAREL 523
Query: 291 YN---KSGCGMNKAIFKLLVPFVCEKGDLDFAF----NLCKRTFSERCLVDQAPLQLVVD 343
++ + G + F L+ +GD+ AF + F+ L A +Q +
Sbjct: 524 FDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCK 583
Query: 344 RLAKELRVEEAKELVELGKTNSYCRY 369
+L E KE+V G T Y
Sbjct: 584 NQEGDLAEELLKEMVSKGMTPDDTTY 609
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/218 (33%), Positives = 118/218 (54%), Gaps = 14/218 (6%)
Query: 66 RLANAKR-FRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCE 124
R ANAK+ F +E+L + +K+ +T+ L L K M E A +F ++
Sbjct: 408 RCANAKKAFLLHDEMLASGIKP---TKKTYTSLLHVLSKKNRMKE-ADDLFKKITSEGVL 463
Query: 125 QTVLSFNALL-GACVNSKKFDEVDG---LFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLD 180
+ FNAL+ G C NS V G L KD+ ++ + PD V++NTI++ +G ++
Sbjct: 464 PDAIMFNALIDGHCSNSN----VKGAFELLKDM-DRMKVPPDEVTFNTIMQGHCREGKVE 518
Query: 181 SANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARL 240
A L EM+++GI+ D I+FNTL+ G+ G DA ++ M++ P V +YNA +
Sbjct: 519 EARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALV 578
Query: 241 DGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGF 278
GL ++ A EL+ EM SK + PD T++ LI+G
Sbjct: 579 QGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGI 616
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 136/300 (45%), Gaps = 39/300 (13%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L++L+ K E A ++ EM + +V +FN ++ K + +
Sbjct: 192 LLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHM-ETS 250
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++P++V+YNTI+ + G +++A+ +L M+++ I D T+ +L+ G GR +A
Sbjct: 251 GVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEA 310
Query: 218 EKIWETMVNMNVRPNVRSYNARLDG----------------------------------- 242
KI+E MV +RP+ YN +DG
Sbjct: 311 SKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHA 370
Query: 243 LAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMN 299
L +E++T +A ++ E++ K I+PD T+ LI G+ N ++A +++ SG
Sbjct: 371 LFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPT 430
Query: 300 KAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
K + L+ + +K + A +L K+ SE L D ++D V+ A EL++
Sbjct: 431 KKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLK 490
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 117/254 (46%), Gaps = 8/254 (3%)
Query: 125 QTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANT 184
++ + F+ L+ +C + + DE F + K G+ P + + N+++ F+ ++A
Sbjct: 149 KSSIVFDYLIKSCCDMNRADEAFECFYTMKEK-GVLPTIETCNSLLSLFLKLNRTEAAWV 207
Query: 185 LLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLA 244
L EM + I+ + TFN ++ G+ A+ M V+PN+ +YN + G
Sbjct: 208 LYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYC 267
Query: 245 IEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKA 301
+ + A ++ M+ ++I PD FT+ +LI G +G LEEA + + + G +
Sbjct: 268 SSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAV 327
Query: 302 IFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA----KEL 357
I+ L+ C KG+LD A + + ++ L E R +EA KE+
Sbjct: 328 IYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEI 387
Query: 358 VELGKTNSYCRYNL 371
E G + YN+
Sbjct: 388 QEKGISPDAITYNI 401
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 82/184 (44%), Gaps = 4/184 (2%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
S++ + K+N +K D FKK + G + ++ + + + E+L+ +
Sbjct: 436 SLLHVLSKKNRMKEADDLFKKITSEGVL-PDAIMFNALIDGHCSNSNVKGAFELLKDMDR 494
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
K E ++ + + E AR++FDEM R + +SFN L+ S++ D
Sbjct: 495 MKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISG--YSRRGDI 552
Query: 146 VDGL-FKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
D ++ G P +++YN +++ D A LL EM KG+ D T+ TL
Sbjct: 553 KDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTL 612
Query: 205 LLGF 208
+ G
Sbjct: 613 IEGI 616
>gi|255577256|ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531026|gb|EEF32879.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 804
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 127/268 (47%), Gaps = 7/268 (2%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K+ +NA ++FDEM R +++ ++ ++K D LF + G PD
Sbjct: 208 KSGKTQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDH-GCIPDS 266
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
V+YN ++ F G +D A LL EK LD ++ L+ G + RF DA+ +
Sbjct: 267 VTYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRK 326
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M N++P+V Y + GL+ + K AL L+ EM + + PD + ALIKG+ + G
Sbjct: 327 MTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYCDLGL 386
Query: 284 LEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL 340
L+EAK + +K+ C + + +L+ +C G + A + C
Sbjct: 387 LDEAKSLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNA 446
Query: 341 VVDRLAKELRVEEAKEL---VELGKTNS 365
++D K +E+A+ L +E+G+ S
Sbjct: 447 LIDGFCKAGNIEKAQLLFYKMEIGRNPS 474
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/312 (20%), Positives = 133/312 (42%), Gaps = 18/312 (5%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
+I G+++ + ++K ++ + + +YT ++ L+ A +F+ +L +
Sbjct: 307 LIDGLFRARRFEDAQVWYRKMTE-HNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTER 365
Query: 87 KDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEV 146
+ LI Y + + A+ + E+ +C + ++ L+ S +
Sbjct: 366 GLVPDTHCYNALIKGYCDLGLLDEAKSLHLEISKNDCFSSACTYTILICGMCRSGLVGDA 425
Query: 147 DGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEME-----------KKGIR 195
+F ++ K G P +V++N +I F G+++ A L Y+ME +G
Sbjct: 426 QQIFNEM-EKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKMEIGRNPSLFLRLSQGAN 484
Query: 196 --LDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKAL 253
LD + T++ +G A I + + PN+ +YN + G A
Sbjct: 485 RVLDTASLQTMVEQLCDSGLILKAYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAF 544
Query: 254 ELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFV 310
+L E++ K ++PD T+ LI G ++ E+A + K+GC ++K + +
Sbjct: 545 KLFKELQLKGLSPDSVTYGTLINGLLSANREEDAFTVLDQILKNGCTPITEVYKSFMTWS 604
Query: 311 CEKGDLDFAFNL 322
C + + AF+L
Sbjct: 605 CRRNKITLAFSL 616
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 92/215 (42%), Gaps = 37/215 (17%)
Query: 89 ISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDG 148
+ K+G++ + L+ +A FE+A+ + +M N + V+ + ++ + KF +
Sbjct: 299 LDKQGYSCLIDGLF-RARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALR 357
Query: 149 LFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
L ++ + G+ PD YN +IK + D G LD A +L E+ K T+ L+ G
Sbjct: 358 LLNEMTER-GLVPDTHCYNALIKGYCDLGLLDEAKSLHLEISKNDCFSSACTYTILICGM 416
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDV 268
+G DA++I+ EM P V
Sbjct: 417 CRSGLVGDAQQIF-----------------------------------NEMEKHGCYPSV 441
Query: 269 FTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKAIF 303
TF ALI GF GN+E+A+ + K G N ++F
Sbjct: 442 VTFNALIDGFCKAGNIEKAQLLFYKMEIGRNPSLF 476
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 90/205 (43%), Gaps = 2/205 (0%)
Query: 89 ISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDG 148
IS + FT LI Y K M E A + F+ M +C+ V ++N +L V + G
Sbjct: 124 ISADAFTV-LIQAYAKMDMIEKAVESFEMMKDFDCKPDVFTYNTVLHVMVRKEVVLLALG 182
Query: 149 LFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
++ + KL P++ +++ +I G +A + EM ++ I + IT+ ++ G
Sbjct: 183 IYNRML-KLNCLPNIATFSILIDGMCKSGKTQNALQMFDEMTQRRILPNKITYTIIISGL 241
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDV 268
+ A +++ M + P+ +YNA L G + +AL L+ D
Sbjct: 242 CQAQKADVAYRLFIAMKDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDK 301
Query: 269 FTFYALIKGFVNEGNLEEAKRWYNK 293
+ LI G E+A+ WY K
Sbjct: 302 QGYSCLIDGLFRARRFEDAQVWYRK 326
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 87/206 (42%), Gaps = 3/206 (1%)
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
VS+N II + + +L E+++ G + F L+ + A + +E
Sbjct: 92 VSHNMIIDMLIKDNGFELYWQVLKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVESFEM 151
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M + + +P+V +YN L + ++ AL + M P++ TF LI G G
Sbjct: 152 MKDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNCLPNIATFSILIDGMCKSGK 211
Query: 284 LEEAKRWYNKSG---CGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL 340
+ A + +++ NK + +++ +C+ D A+ L C+ D
Sbjct: 212 TQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNA 271
Query: 341 VVDRLAKELRVEEAKELVELGKTNSY 366
++ K RV+EA L++ + + Y
Sbjct: 272 LLHGFCKLGRVDEALGLLKYFEKDRY 297
>gi|147840993|emb|CAN64120.1| hypothetical protein VITISV_037241 [Vitis vinifera]
Length = 418
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 153/318 (48%), Gaps = 7/318 (2%)
Query: 47 SSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDIS-KEGFTARLIALYGKA 105
+ D FR Y + +L ++ F +E+IL ++ S KE +I+ YG+A
Sbjct: 33 NPDPKPFRYTHLSYDLIITKLGRSRMFHEMEQILSQLRRETRFSPKEIIFCNVISFYGRA 92
Query: 106 AMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVS 165
+ + A + F+ +P C++TV S N+LL A +N K+F++ DG+ + K P++ +
Sbjct: 93 RLPDRAIQTFESIPEFRCQRTVKSLNSLLNALLNCKEFEKFDGILSGI-DKFAT-PNVCT 150
Query: 166 YNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMV 225
YN +I A G L A + EM +K + +++TF TL+ G + R +A ++ E MV
Sbjct: 151 YNILINACCLSGRLGDAWNVFDEMLRKHVCPNVVTFGTLISGLCRDSRLDEASRLKEDMV 210
Query: 226 NM-NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
+ NV+PN Y + + GL + A EL EM + ++ D + LI G
Sbjct: 211 KVFNVKPNAFVYASLMKGLCRVNELSLAFELKKEMVANKLRLDSGIYSTLIAALFKVGRK 270
Query: 285 EE---AKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLV 341
+E ++GC + + ++ C + D + A+ + + + C D ++
Sbjct: 271 DEVFVVLEEMRENGCKPDTVTYNAMISGFCNEKDFEAAYGVLEEMVVKGCKPDVISYNVI 330
Query: 342 VDRLAKELRVEEAKELVE 359
+ L KE + EA +L E
Sbjct: 331 ISGLCKEGKWREANDLFE 348
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 3/206 (1%)
Query: 110 NARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTI 169
+A VFDEM ++ V++F L+ + DE L +D+ ++P+ Y ++
Sbjct: 166 DAWNVFDEMLRKHVCPNVVTFGTLISGLCRDSRLDEASRLKEDMVKVFNVKPNAFVYASL 225
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
+K L A L EM +RLD ++TL+ + GR + + E M
Sbjct: 226 MKGLCRVNELSLAFELKKEMVANKLRLDSGIYSTLIAALFKVGRKDEVFVVLEEMRENGC 285
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
+P+ +YNA + G EK + A ++ EM K PDV ++ +I G EG EA
Sbjct: 286 KPDTVTYNAMISGFCNEKDFEAAYGVLEEMVVKGCKPDVISYNVIISGLCKEGKWREAND 345
Query: 290 WYN---KSGCGMNKAIFKLLVPFVCE 312
+ + GC + +++L +CE
Sbjct: 346 LFEDMPRRGCTPDVGSYRILFDGLCE 371
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 97/223 (43%), Gaps = 7/223 (3%)
Query: 25 GSVIRGIYKENNL---KRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILE 81
G++I G+ +++ L RL + K ++ + N +Y ++ L E+ +
Sbjct: 187 GTLISGLCRDSRLDEASRLKEDMVKVFNV---KPNAFVYASLMKGLCRVNELSLAFELKK 243
Query: 82 HQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSK 141
K G + LIA K + V +EM C+ +++NA++ N K
Sbjct: 244 EMVANKLRLDSGIYSTLIAALFKVGRKDEVFVVLEEMRENGCKPDTVTYNAMISGFCNEK 303
Query: 142 KFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITF 201
F+ G+ +++ K G +PD++SYN II +G AN L +M ++G D+ ++
Sbjct: 304 DFEAAYGVLEEMVVK-GCKPDVISYNVIISGLCKEGKWREANDLFEDMPRRGCTPDVGSY 362
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLA 244
L G +F +A I + MV P S ++ L
Sbjct: 363 RILFDGLCEGMQFNEAAFILDEMVFKGYAPKSASXTKFVEALC 405
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 72/137 (52%), Gaps = 1/137 (0%)
Query: 130 FNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEM 189
++ L+ A + DEV + +++ + G +PD V+YN +I F ++ ++A +L EM
Sbjct: 257 YSTLIAALFKVGRKDEVFVVLEEM-RENGCKPDTVTYNAMISGFCNEKDFEAAYGVLEEM 315
Query: 190 EKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQT 249
KG + D+I++N ++ G G++ +A ++E M P+V SY DGL Q
Sbjct: 316 VVKGCKPDVISYNVIISGLCKEGKWREANDLFEDMPRRGCTPDVGSYRILFDGLCEGMQF 375
Query: 250 KKALELVGEMRSKEINP 266
+A ++ EM K P
Sbjct: 376 NEAAFILDEMVFKGYAP 392
>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Brachypodium distachyon]
Length = 627
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 124/251 (49%), Gaps = 7/251 (2%)
Query: 126 TVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTL 185
T +S+ L+ A ++ + GL +D+ G+ PD+V+Y T+I+ D +D A L
Sbjct: 112 TAVSYTTLMRALCAERRTGQAVGLLRDM-QASGVRPDVVTYGTLIRGLCDAADVDKAVEL 170
Query: 186 LYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAI 245
L EM + GI +++ ++ LL G+ GR+ K++E M + P+V Y +D L
Sbjct: 171 LREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCR 230
Query: 246 EKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAI 302
E + KKA +++ +M + + P+V T+ LI EG+++EA N + G ++
Sbjct: 231 EGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVT 290
Query: 303 FKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL--VVDRLAKELRVEEAKELVEL 360
+ L+ + ++D A L + +V+ + V+ L K R+ +A ++ ++
Sbjct: 291 YNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDM 350
Query: 361 GKTNSYCRYNL 371
N C NL
Sbjct: 351 MAENG-CACNL 360
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/377 (18%), Positives = 159/377 (42%), Gaps = 53/377 (14%)
Query: 16 ATATGPKFI--GSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRF 73
A+ P + G++IRG+ ++ + V+ ++ + G N +Y+ +Q A R+
Sbjct: 141 ASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESG-IEPNVVVYSCLLQGYCKAGRW 199
Query: 74 RWIEEILEHQKQYKDISKEGFTARLIALYG------KAAMFENARKVFDEMPGRNCEQTV 127
+ ++ E ++S G ++ G + + A +V D+M R E V
Sbjct: 200 ECVSKVFE------EMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNV 253
Query: 128 LSFNALL----------------------GACVNSKKF-------------DEVDGLFKD 152
+++N L+ G +++ + DE GL ++
Sbjct: 254 VTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEE 313
Query: 153 LPH-KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSN 211
+ H + +EP++V++N++I G + A + M + G +L+TFN L+ G
Sbjct: 314 MIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRV 373
Query: 212 GRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTF 271
+ A ++ + M + + P+ +Y+ ++G Q +A L+ +MR I P++ +
Sbjct: 374 HKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHY 433
Query: 272 YALIKGFVNEGNLEEAKRWYNK--SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSE 329
L+ +G +E+A+ ++++ C ++ + ++ C D A K E
Sbjct: 434 IPLLAALCEQGMMEQARNFFDEMHKNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDE 493
Query: 330 RCLVDQAPLQLVVDRLA 346
+ D ++++ A
Sbjct: 494 GLIPDSVTYSMLINMFA 510
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 123/259 (47%), Gaps = 6/259 (2%)
Query: 105 AAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLV 164
AA + A ++ EM E V+ ++ LL + +++ V +F+++ + GIEPD+V
Sbjct: 161 AADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGR-GIEPDVV 219
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
Y +I + +G + A ++ +M ++G+ +++T+N L+ G +A + M
Sbjct: 220 MYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNM 279
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE--INPDVFTFYALIKGFVNEG 282
+ V + +YN + GL+ + +A+ L+ EM E + P+V TF ++I G G
Sbjct: 280 LEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTG 339
Query: 283 NLEEA---KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQ 339
+ +A + ++GC N F LL+ + + A L S D
Sbjct: 340 RMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYS 399
Query: 340 LVVDRLAKELRVEEAKELV 358
++++ K +V+ A+ L+
Sbjct: 400 ILINGFCKMWQVDRAESLL 418
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 118/266 (44%), Gaps = 14/266 (5%)
Query: 97 RLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHK 156
RL+ L A+ + V D + TVL+ G C+++ F L + + H+
Sbjct: 58 RLVPLPESPALLSSLPSVRDAVS----YNTVLAALCRQGGCLDAALF-----LLRVMAHE 108
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
P VSY T+++A + A LL +M+ G+R D++T+ TL+ G
Sbjct: 109 --TRPTAVSYTTLMRALCAERRTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDK 166
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
A ++ M + PNV Y+ L G + + ++ EM + I PDV + LI
Sbjct: 167 AVELLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLID 226
Query: 277 GFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV 333
EG +++A + +K G N + +L+ +C++G + A +L + +
Sbjct: 227 SLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVAL 286
Query: 334 DQAPLQLVVDRLAKELRVEEAKELVE 359
D ++ L+ L ++EA L+E
Sbjct: 287 DAVTYNTLITGLSGVLEMDEAMGLLE 312
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 135/314 (42%), Gaps = 14/314 (4%)
Query: 25 GSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQK 84
GSV + NN+ +K L NT + TG L + +EE++ H +
Sbjct: 267 GSVKEAMSLRNNM------LEKGVALDAVTYNT-LITGLSGVLEMDEAMGLLEEMI-HGE 318
Query: 85 QYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
+ + F + + L K A +V D M C +++FN L+G + K
Sbjct: 319 TMVEPNVVTFNSVIHGLC-KTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVK 377
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
+ L ++ G+EPD +Y+ +I F +D A +LL +M + GI +L+ + L
Sbjct: 378 KAMELMDEMASS-GLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPL 436
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
L G A ++ M + N + +V +Y+ + G + K A E + M + +
Sbjct: 437 LAALCEQGMMEQARNFFDEM-HKNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGL 495
Query: 265 NPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFN 321
PD T+ LI F N G+L A+R + SG + A+F L+ KGD +
Sbjct: 496 IPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLE 555
Query: 322 LCKRTFSERCLVDQ 335
L + ++ +D
Sbjct: 556 LIREMTAKDIALDS 569
>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
Length = 913
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 145/328 (44%), Gaps = 41/328 (12%)
Query: 86 YKDISKEGFTARLIA-LYGKAAMFENARKVFDEMPGR-NCEQTVLSFNALLGACVNSKKF 143
+ I K F +L+A Y K +M + A +F M C+ + S+N+LL A + S K+
Sbjct: 46 FHHILKRLFDPKLVAHAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKW 105
Query: 144 DEVDGLF-------------------------------KDLPHKL---GIEPDLVSYNTI 169
DE + F K+L + + G PD+ SY T+
Sbjct: 106 DEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTL 165
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMV-NMN 228
I + G + A L EM ++G+ D+ +N L+ GF+ G +A +IWE ++ +
Sbjct: 166 INSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPS 225
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
V PN+ SYN ++GL + ++ E+ M+ E D++T+ LI G GNL+ A
Sbjct: 226 VYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGAT 285
Query: 289 RWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRL 345
R Y ++G + ++ ++ G ++ L K E C +++ L
Sbjct: 286 RVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRT-VVSYNILIRGL 344
Query: 346 AKELRVEEAKELVELGKTNSYCRYNLKF 373
+ +V+EA + EL C ++ +
Sbjct: 345 FENAKVDEAISIWELLPEKDCCADSMTY 372
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 127/290 (43%), Gaps = 37/290 (12%)
Query: 25 GSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQK 84
G ++ G+ K L + + +++ + GR +T Y+ + L R + +L+
Sbjct: 373 GVLVHGLCKNGYLNKALSILEEAEN-GRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMT 431
Query: 85 QYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
++ +I + +A+ E+A + F M + C TV+++N L+ +++F
Sbjct: 432 KHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFS 491
Query: 145 EVDGLFKDLPHKLGIEPDLVSY-----------------------------------NTI 169
E L K++ K G +P++++Y N I
Sbjct: 492 EAYALVKEMLQK-GWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNII 550
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
I G ++ A L EM+++ +L+T NTL+ GFY F A KIW+ ++ +
Sbjct: 551 IHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGL 610
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFV 279
+P++ SYN L GL + A+ + + + + P T+ L++G++
Sbjct: 611 QPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVQGYL 660
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 124/276 (44%), Gaps = 5/276 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI K +A K+FDEMP R V +N L+ +++ L
Sbjct: 165 LINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGP 224
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
+ P++ SYN +I G D + + + M+K DL T++TL+ G +G A
Sbjct: 225 SVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGA 284
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++++ M V P+V YN L+G + ++ LEL M KE V ++ LI+G
Sbjct: 285 TRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVME-KEGCRTVVSYNILIRG 343
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
++EA + + C + + +LV +C+ G L+ A ++ + + R +D
Sbjct: 344 LFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLD 403
Query: 335 QAPLQLVVDRLAKELRVEEAKELVELGKTNSYCRYN 370
+++ L +E R++E +++ T C+ N
Sbjct: 404 TFAYSSMINGLCREGRLDEVAGVLD-QMTKHGCKPN 438
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 87/180 (48%), Gaps = 1/180 (0%)
Query: 114 VFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAF 173
V D+M C+ NA++ V + K ++ F ++ K G P +V+YNT+I
Sbjct: 426 VLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSK-GCFPTVVTYNTLINGL 484
Query: 174 VDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNV 233
A L+ EM +KG + ++IT++ L+ G + A +W + +P+V
Sbjct: 485 SKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDV 544
Query: 234 RSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK 293
+ +N + GL + + AL+L EM+ + P++ T L++GF + E A + ++
Sbjct: 545 KMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDH 604
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 130/310 (41%), Gaps = 52/310 (16%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I G+ NL +K+ ++ G + +Y + A R IEE LE
Sbjct: 270 TLIHGLCGSGNLDGATRVYKEMAENG-VSPDVVVYNTMLNGYLRAGR---IEECLE---L 322
Query: 86 YKDISKEGFTARLIALYGKA--AMFENAR-----KVFDEMPGRNCEQTVLSFNALL-GAC 137
+K + KEG R + Y +FENA+ +++ +P ++C +++ L+ G C
Sbjct: 323 WKVMEKEG--CRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLC 380
Query: 138 VNS----------------------------------KKFDEVDGLFKDLPHKLGIEPDL 163
N + DEV G+ + K G +P+
Sbjct: 381 KNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMT-KHGCKPNP 439
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
N +I FV L+ A M KG ++T+NTL+ G RF++A + +
Sbjct: 440 YVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKE 499
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M+ +PN+ +Y+ ++GL K+ AL L + K PDV +I G + G
Sbjct: 500 MLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGK 559
Query: 284 LEEAKRWYNK 293
+E+A + Y++
Sbjct: 560 VEDALQLYSE 569
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/327 (20%), Positives = 125/327 (38%), Gaps = 75/327 (22%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K F+ + +++ M Q + +++ L+ S D ++K++ G+ PD+
Sbjct: 242 KCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAEN-GVSPDV 300
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
V YNT++ ++ G ++ L MEK+G R ++++N L+ G + N + +A IWE
Sbjct: 301 VVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWEL 359
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE------------------------- 258
+ + + +Y + GL KAL ++ E
Sbjct: 360 LPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGR 419
Query: 259 ----------MRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGC--------- 296
M P+ + A+I GFV LE+A R++ GC
Sbjct: 420 LDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNT 479
Query: 297 ---GMNKA-----------------------IFKLLVPFVCEKGDLDFAFNLCKRTFSER 330
G++KA + LL+ +C+ LD A NL + +
Sbjct: 480 LINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKG 539
Query: 331 CLVDQAPLQLVVDRLAKELRVEEAKEL 357
D +++ L +VE+A +L
Sbjct: 540 FKPDVKMHNIIIHGLCSSGKVEDALQL 566
>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 756
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 166/357 (46%), Gaps = 13/357 (3%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
+++ G+ + ++K+ ++ + G F + Y + L EIL H
Sbjct: 307 ALVNGLCRTGHIKQGLEMMDFMLEKG-FELDVYTYNSLISGLCKLGEIDEAVEILHHMVS 365
Query: 86 YKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKF 143
+D T LI K E A ++ + + V +FN+L+ G C+ S +
Sbjct: 366 -RDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNRE 424
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT 203
++ LF+++ K G +PD +Y+ +I++ + L A LL EME G +++ +NT
Sbjct: 425 IAME-LFEEMKEK-GCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNT 482
Query: 204 LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
L+ G N R DAE I++ M + V + +YN ++GL K+ ++A +L+ +M +
Sbjct: 483 LIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEG 542
Query: 264 INPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAF 320
+ PD FT+ ++K F +G+++ A +GC + + L+ +C+ G +D A
Sbjct: 543 LKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVAS 602
Query: 321 NLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA----KELVELGKTNSYCRYNLKF 373
L + + ++ V+ L K R +EA +E++E G Y + F
Sbjct: 603 KLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVF 659
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 152/356 (42%), Gaps = 11/356 (3%)
Query: 22 KFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILE 81
+F + + K N LK LV+ + + ++ L A + R +LE
Sbjct: 165 RFYNVALSLLVKANKLK-LVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLE 223
Query: 82 HQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSK 141
Y E L+ + + A E A ++ + M CE T +S N L+
Sbjct: 224 DMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEG 283
Query: 142 KFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITF 201
+ +E + + + G PD V++N ++ G + ++ M +KG LD+ T+
Sbjct: 284 RIEEA---LRFIYEEEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTY 340
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS 261
N+L+ G G +A +I MV+ + PN +YN + L E + A EL + S
Sbjct: 341 NSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTS 400
Query: 262 KEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDF 318
K + PDV TF +LI+G N E A + + GC ++ + +L+ +C + L
Sbjct: 401 KGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKE 460
Query: 319 AFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE----LGKTNSYCRYN 370
A L K C + ++D L K RV +A+++ + LG + S YN
Sbjct: 461 ALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYN 516
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 93/181 (51%), Gaps = 6/181 (3%)
Query: 110 NARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTI 169
+A +FD+M ++ +++N L+ SK+ +E L + + G++PD +Y T+
Sbjct: 495 DAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIME-GLKPDKFTYTTM 553
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET--MVNM 227
+K F +G + A ++ M G D++T+ TL+ G GR A K+ + M M
Sbjct: 554 LKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGM 613
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN-LEE 286
+ P ++YN + L K+TK+A+ L EM K PDV T+ + +G N G ++E
Sbjct: 614 VLTP--QAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQE 671
Query: 287 A 287
A
Sbjct: 672 A 672
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 102/266 (38%), Gaps = 40/266 (15%)
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
E++ LF + ++PD YN + V L TL +M + D+ TFN L
Sbjct: 146 EINPLFLLMERDFAVKPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNIL 205
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKAL---ELV----G 257
+ + A + E M N +RP+ +++ + G E + AL EL+
Sbjct: 206 IRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGC 265
Query: 258 EMRSKEIN--------------------------PDVFTFYALIKGFVNEGNLEEAKRWY 291
E+ S +N PD TF AL+ G G++++
Sbjct: 266 ELTSVSVNVLVNGLCKEGRIEEALRFIYEEEGFCPDQVTFNALVNGLCRTGHIKQGLEMM 325
Query: 292 N---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKE 348
+ + G ++ + L+ +C+ G++D A + S C + ++ L KE
Sbjct: 326 DFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKE 385
Query: 349 LRVEEAKELVEL----GKTNSYCRYN 370
VE A EL + G C +N
Sbjct: 386 NHVEAATELARVLTSKGVLPDVCTFN 411
>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 158/336 (47%), Gaps = 5/336 (1%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
+I + + +++ V K LG + ++ +T + L N R + E+
Sbjct: 127 LINSLCRLSHIHFAVSVLSKMFKLG-IQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGR 185
Query: 87 KDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEV 146
+ L+ + K M AR VF+ M + E + ++NAL+ + ++
Sbjct: 186 DAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDA 245
Query: 147 DGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLL 206
+F+ + K G P + SY+ +I + +D A LL +M +K + + +T+NTL+
Sbjct: 246 SKVFEIMVGK-GCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQ 304
Query: 207 GFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINP 266
G +A+++++ M + + PN+R+Y+ LDGL ++AL+L+ M+ +++ P
Sbjct: 305 GLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEP 364
Query: 267 DVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLC 323
D+ + LI+G G LE AK ++K +G + + +++ + ++G D A+ L
Sbjct: 365 DIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLF 424
Query: 324 KRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
++ + L D +++ + A +L++
Sbjct: 425 RKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLID 460
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 110/253 (43%), Gaps = 4/253 (1%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
++A F M N + + LG+ K++ V L + G+ + + N
Sbjct: 67 IDDAMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQM-DLFGVAHNDYTLN 125
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
+I + + A ++L +M K GI+ D +TF TL+ G + GR +A +++ M
Sbjct: 126 ILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGR 185
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+ PN ++ +D L + +A + M K + P+++T+ AL+ G+ + +A
Sbjct: 186 DAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDA 245
Query: 288 KRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDR 344
+ + GC + + +L+ C+ +D A L + + + + ++
Sbjct: 246 SKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQG 305
Query: 345 LAKELRVEEAKEL 357
L + EA+EL
Sbjct: 306 LCHASSLLEAQEL 318
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 78/172 (45%), Gaps = 1/172 (0%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
A+ A+++F +M + +++ LL +E L + + +EPD+
Sbjct: 308 HASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQER-KLEPDI 366
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
V YN +I+ G L+ A L ++ GIR + T+N ++ G G +A K++
Sbjct: 367 VLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRK 426
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
M + P+ SYN + G + A++L+ EM + + D TF L+
Sbjct: 427 MEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLL 478
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 82/192 (42%), Gaps = 13/192 (6%)
Query: 56 NTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARL----IALYG--KAAMFE 109
NT Y +Q L +A +LE Q+ +K + G L I L G K E
Sbjct: 295 NTVTYNTLMQGLCHA------SSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLE 348
Query: 110 NARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTI 169
A K+ M R E ++ +N L+ + K + LF L GI P + +YN +
Sbjct: 349 EALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFAN-GIRPSVRTYNIM 407
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
IK + +G D A L +ME G D ++N ++ GF N + A ++ + MV
Sbjct: 408 IKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRF 467
Query: 230 RPNVRSYNARLD 241
+ ++ LD
Sbjct: 468 SADSSTFKMLLD 479
>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Vitis vinifera]
Length = 746
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 124/257 (48%), Gaps = 4/257 (1%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K + A +++ E+ + V + N ++ A ++K + D+ K G+ PD+
Sbjct: 231 KVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEK-GVFPDV 289
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
V+YNT+I A+ +G L+ A L+ M KG++ + T+N ++ G G++ A+ + +
Sbjct: 290 VTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDE 349
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M+ + + P+ +YN L A + EM S+ + PD+ +F ALI G
Sbjct: 350 MLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGC 409
Query: 284 LEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL 340
L++A +++ +G + I+ +L+ C G + A + + C++D
Sbjct: 410 LDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNT 469
Query: 341 VVDRLAKELRVEEAKEL 357
+++ L KE + EA EL
Sbjct: 470 ILNGLCKEKMLSEADEL 486
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 94/184 (51%), Gaps = 1/184 (0%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K + A+ V DEM ++N LL C + + + +F ++P + G+ PDL
Sbjct: 336 KTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQ-GVVPDL 394
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
VS++ +I G LD A +M+ G+ D + + L+ GF NG ++A K+ +
Sbjct: 395 VSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDE 454
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M+ +V +YN L+GL EK +A EL EM + + PD +TF LI G+ +GN
Sbjct: 455 MLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGN 514
Query: 284 LEEA 287
+ +A
Sbjct: 515 MNKA 518
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 105/219 (47%), Gaps = 36/219 (16%)
Query: 110 NARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPD------- 162
+A ++FDEMP + ++SF+AL+G + D+ F+D+ + G+ PD
Sbjct: 377 DAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNA-GLAPDNVIYTIL 435
Query: 163 ----------------------------LVSYNTIIKAFVDKGSLDSANTLLYEMEKKGI 194
+V+YNTI+ + L A+ L EM ++G+
Sbjct: 436 IGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGV 495
Query: 195 RLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALE 254
D TF TL+ G+ +G A ++E M+ N++P+V +YN +DG + +K E
Sbjct: 496 FPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNE 555
Query: 255 LVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK 293
L +M S+ I P+ ++ LI G+ N G + EA R +++
Sbjct: 556 LWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDE 594
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 87/170 (51%), Gaps = 1/170 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI Y A +++DEM + E T+++ N ++ + + D ++ K
Sbjct: 575 LINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLK- 633
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
GI PD ++YNT+I F+ + ++D A L+ +ME G+ D+IT+N +L GF GR +A
Sbjct: 634 GIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEA 693
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPD 267
E I M+ V P+ +Y + ++G + K+A + EM + PD
Sbjct: 694 ELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 743
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 101/196 (51%), Gaps = 1/196 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K + E +++++M R +S+ L+ N E L+ ++ K
Sbjct: 540 LIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEK- 598
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G E +++ NTI+K + G+ A+ L M KGI D IT+NTL+ GF A
Sbjct: 599 GFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRA 658
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ M N + P+V +YN L+G + + + ++A ++ +M + +NPD T+ +LI G
Sbjct: 659 FALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLING 718
Query: 278 FVNEGNLEEAKRWYNK 293
V + NL+EA R +++
Sbjct: 719 HVTQNNLKEAFRVHDE 734
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/312 (21%), Positives = 130/312 (41%), Gaps = 34/312 (10%)
Query: 38 KRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTAR 97
+R +D +S+ F+ + ++ + L ++R + ++ + +S+
Sbjct: 115 QRFIDSI--TSNCPNFKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVES 172
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+ YG NC L F+ L+ V ++K E F+ L K
Sbjct: 173 LVLTYG------------------NCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSK- 213
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ + + N+++ V G +D A + E+ + G+++++ T N ++ N + +
Sbjct: 214 GLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENT 273
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ M V P+V +YN ++ + ++A EL+ M K + P VFT+ A+I G
Sbjct: 274 KSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIING 333
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
G AK + K G + A + +L+ C ++ A +R F D
Sbjct: 334 LCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDA----ERIF------D 383
Query: 335 QAPLQLVVDRLA 346
+ P Q VV L
Sbjct: 384 EMPSQGVVPDLV 395
>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
Length = 583
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 143/338 (42%), Gaps = 22/338 (6%)
Query: 40 LVDKFKKSSDLGRFR------------TNTGIYTGTVQRLANAKRFRWIEEILEHQKQYK 87
L+D + + D GR + G YT V L+ A+ +E + K
Sbjct: 218 LLDCYVRQKDDGRVQEILEIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANN 277
Query: 88 DISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVD 147
+ +I Y +A A KV DE G E ++ L+ + + +
Sbjct: 278 VVGDVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAE 337
Query: 148 GLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLG 207
L D+ + G+ + + +NT+I + KG +D A + MEK G+ LD+ T+NTL G
Sbjct: 338 MLLADMQGQ-GVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACG 396
Query: 208 FYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPD 267
R +A+ + M+ M V PN +Y + + +A L EM K P
Sbjct: 397 LCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPS 456
Query: 268 VFTFYALIKGFVNEGNLEEAKRW---YNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNL-- 322
V T+ +I G+ +G++ EA+R+ K G + + LV C G +D A L
Sbjct: 457 VVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFE 516
Query: 323 -CKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
K+ +E +V L + LAKE R E A +L +
Sbjct: 517 EMKQRGTEPNVVAYTAL---ISGLAKEGRSEAAFQLYD 551
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 83/153 (54%), Gaps = 4/153 (2%)
Query: 138 VNSKKFDEVDG--LFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIR 195
++ K D V+ LF+++ K G P +V+YN +I + KGS+ A EMEKKG
Sbjct: 431 IHCKDGDMVEARRLFREMAEK-GATPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFV 489
Query: 196 LDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALEL 255
D+ T+ +L+ G NG+ A K++E M PNV +Y A + GLA E +++ A +L
Sbjct: 490 PDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQL 549
Query: 256 VGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
+M + PD + AL+ G ++ N ++ K
Sbjct: 550 YDDMLKAGLIPDDSLYSALV-GSLHTDNRKDVK 581
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 116/275 (42%), Gaps = 8/275 (2%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K+ ++AR++ D+MP L +N+LL V K V + + + ++ GIE +
Sbjct: 189 KSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMENE-GIEATV 247
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
+Y ++ + + L EM+ + D+ + ++ + G A K+ +
Sbjct: 248 GTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDE 307
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
V V PN R+Y ++G Q + A L+ +M+ + + + F +I G+ +G
Sbjct: 308 CVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGM 367
Query: 284 LEEA---KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL 340
+++A K K G ++ + L +C LD A L + +
Sbjct: 368 VDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTT 427
Query: 341 VVDRLAKELRVEEA----KELVELGKTNSYCRYNL 371
++ K+ + EA +E+ E G T S YN+
Sbjct: 428 LISIHCKDGDMVEARRLFREMAEKGATPSVVTYNV 462
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 94/208 (45%), Gaps = 6/208 (2%)
Query: 153 LPHKLGIEPDLVS---YNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFY 209
L LG P VS + ++ G +D A LL +M + G+ L+ + +N+LL +
Sbjct: 164 LERALGSCPGSVSPLAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYV 223
Query: 210 SNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVF 269
++I E M N + V +Y +D L+ + K L EM++ + DV+
Sbjct: 224 RQKDDGRVQEILEIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVY 283
Query: 270 TFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRT 326
+ A+I + GN+ A + ++ +G N+ + +L+ C+ G ++ A L
Sbjct: 284 LYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADM 343
Query: 327 FSERCLVDQAPLQLVVDRLAKELRVEEA 354
+ ++Q ++D ++ V++A
Sbjct: 344 QGQGVGLNQIIFNTMIDGYCRKGMVDDA 371
>gi|297848938|ref|XP_002892350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338192|gb|EFH68609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 493
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 131/260 (50%), Gaps = 6/260 (2%)
Query: 67 LANAKRFRWIEEILEHQKQYKDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQ 125
+A K++ + + H + IS + ++ + LI + + + A +M E
Sbjct: 83 IAKLKKYEAVISLFRHI-EILGISHDLYSFSTLIDCFCRCSRLSLALSCLGKMMKLGFEP 141
Query: 126 TVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTL 185
++++F +L+ + + E L + LG EP++V YNTII + + +D+A +
Sbjct: 142 SIVTFGSLVNGFCHVNRIQEAMSLVDQIV-GLGYEPNVVIYNTIIDSLCENRQVDTALDV 200
Query: 186 LYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAI 245
L MEK GIR D+IT+N+L+ + +G++ + +I M+ M + P+V +++A +D
Sbjct: 201 LNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVFGK 260
Query: 246 EKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAI 302
E Q +A + EM + ++P++ T+ +LI G G L+EAK+ N G N
Sbjct: 261 EGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVT 320
Query: 303 FKLLVPFVCEKGDLDFAFNL 322
+ LV C+ +D A +
Sbjct: 321 YNTLVNGYCKSKRVDDAMKI 340
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 143/325 (44%), Gaps = 43/325 (13%)
Query: 5 SRLLSCSFSTTATATGPKFI--GSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTG 62
S LSC P + GS++ G N ++ + + LG + N IY
Sbjct: 125 SLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLG-YEPNVVIYNT 183
Query: 63 TVQRLANAKRFRWIEEILEHQKQ---------YKDI-------SKEGFTAR--------- 97
+ L ++ ++L H ++ Y + K G +AR
Sbjct: 184 IIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMG 243
Query: 98 ----------LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEV 146
+I ++GK A+K +DEM R+ + ++++N+L+ G C++ DE
Sbjct: 244 IHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGL-LDEA 302
Query: 147 DGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLL 206
+ + K G P+ V+YNT++ + +D A +L M G+ D T+NTL
Sbjct: 303 KKVLNFMVSK-GFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQ 361
Query: 207 GFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINP 266
G+ G+F AEK+ MV+ V P++ ++N LDGL + +KAL + +++ E
Sbjct: 362 GYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVV 421
Query: 267 DVFTFYALIKGFVNEGNLEEAKRWY 291
+ T+ +IKG +E+A WY
Sbjct: 422 GIITYNIIIKGMCKANKVEDA--WY 444
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 122/249 (48%), Gaps = 4/249 (1%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
+ A V + M V+++N+L+ +S K+ + D+ ++GI PD+++++
Sbjct: 195 DTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARILSDM-MRMGIHPDVITFSA 253
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
+I F +G L A EM ++ + +++T+N+L+ G +G +A+K+ MV+
Sbjct: 254 MIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKG 313
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
PN +YN ++G K+ A++++ M ++ D FT+ L +G+ G A+
Sbjct: 314 FFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAE 373
Query: 289 RWYNKS-GCGMNKAI--FKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRL 345
+ + CG+ I F +L+ +CE G ++ A + +V +++ +
Sbjct: 374 KVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYNIIIKGM 433
Query: 346 AKELRVEEA 354
K +VE+A
Sbjct: 434 CKANKVEDA 442
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 125/289 (43%), Gaps = 39/289 (13%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
F +A +F +M +++ F+ LL A KK++ V LF+ + LGI DL S++
Sbjct: 54 FNDALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHI-EILGISHDLYSFS 112
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
T+I F L A + L +M K G ++TF +L+ GF R +A + + +V +
Sbjct: 113 TLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGL 172
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALE--------------------------------- 254
PNV YN +D L +Q AL+
Sbjct: 173 GYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVS 232
Query: 255 --LVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPF 309
++ +M I+PDV TF A+I F EG L EAK+ Y+ + N + L+
Sbjct: 233 ARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLING 292
Query: 310 VCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
+C G LD A + S+ + +V+ K RV++A +++
Sbjct: 293 LCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKIL 341
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 111/255 (43%), Gaps = 17/255 (6%)
Query: 48 SDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLI-------- 99
SD+ R GI+ + A F ++LE +KQY ++ + ++
Sbjct: 237 SDMMRM----GIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLING 292
Query: 100 -ALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLG 158
++G + + A+KV + M + +++N L+ SK+ D+ + + H G
Sbjct: 293 LCIHG---LLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHD-G 348
Query: 159 IEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAE 218
++ D +YNT+ + + G ++A +L M G+ D+ TFN LL G +G+ A
Sbjct: 349 VDGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKAL 408
Query: 219 KIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGF 278
E + + +YN + G+ + + A L + K ++PDV T+ ++ G
Sbjct: 409 VKLEDLQKSETVVGIITYNIIIKGMCKANKVEDAWYLFCSLALKGVSPDVITYTTMMIGL 468
Query: 279 VNEGNLEEAKRWYNK 293
+ EA Y K
Sbjct: 469 RRKRLWLEAHELYRK 483
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/166 (19%), Positives = 78/166 (46%), Gaps = 1/166 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+ Y K+ ++A K+ M + ++N L + +F+ + + +
Sbjct: 324 LVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARMV-SC 382
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ PD+ ++N ++ + G ++ A L +++K + +IT+N ++ G + DA
Sbjct: 383 GVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYNIIIKGMCKANKVEDA 442
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
++ ++ V P+V +Y + GL ++ +A EL +M+ +
Sbjct: 443 WYLFCSLALKGVSPDVITYTTMMIGLRRKRLWLEAHELYRKMKKDD 488
Score = 41.6 bits (96), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 76/188 (40%), Gaps = 39/188 (20%)
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLD 197
++S KF++ LF D+ + P +V ++ ++ A ++ +L +E GI D
Sbjct: 49 LHSIKFNDALTLFCDMAESRPL-PSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHD 107
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
L +F+TL+ F R + AL +G
Sbjct: 108 LYSFSTLIDCFCRCSRLS-----------------------------------LALSCLG 132
Query: 258 EMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK-SGCGM--NKAIFKLLVPFVCEKG 314
+M P + TF +L+ GF + ++EA ++ G G N I+ ++ +CE
Sbjct: 133 KMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCENR 192
Query: 315 DLDFAFNL 322
+D A ++
Sbjct: 193 QVDTALDV 200
>gi|255660802|gb|ACU25570.1| pentatricopeptide repeat-containing protein [Glandularia
microphylla]
Length = 418
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 139/306 (45%), Gaps = 4/306 (1%)
Query: 12 FSTTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAK 71
T T T ++ S + Y E+ R + + + +FR ++ L K
Sbjct: 56 LETKGTQTSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLK 115
Query: 72 RFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFN 131
F+ + E + + F L+ + K A+ VFD + +V+SFN
Sbjct: 116 YFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFN 175
Query: 132 ALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEK 191
L+ + DE L K+ G++PD+ +Y+ +I + +D AN L EM
Sbjct: 176 TLMNGYIKLGDLDEGFRL-KNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLD 234
Query: 192 KGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKK 251
G+ + +TF TL+ G NGR A +I++ M++ ++ P++ +YN + GL + K+
Sbjct: 235 NGLVPNGVTFTTLIDGHCKNGRVVLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQ 294
Query: 252 ALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVP 308
A +L+ EM K + PD T+ LI G EG+LE A + K ++ + L+
Sbjct: 295 AQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETALEYRKRMIKENIRLDDVAYTALIS 354
Query: 309 FVCEKG 314
+C++G
Sbjct: 355 GLCQEG 360
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 78/160 (48%), Gaps = 1/160 (0%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A +++ +M ++ ++++N L+ + L ++ K G++PD ++Y T+I
Sbjct: 260 AMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMK-GLKPDKITYTTLI 318
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
+G L++A M K+ IRLD + + L+ G GR DAEK+ M+++ ++
Sbjct: 319 DGSCKEGDLETALEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
P + +Y ++ + +L+ EM+ P V T
Sbjct: 379 PEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418
>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 116/239 (48%), Gaps = 10/239 (4%)
Query: 78 EILEHQKQYKDISKEGFTARLIA----LYGKAAMFE--NARKVFDEMPGRNCEQTVLSFN 131
++ E Q K +++ G ++ +YG + E ARK+FD M + C+ V S+N
Sbjct: 323 KVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYN 382
Query: 132 ALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEK 191
L+ K+ DE LF ++ H+ G+ P+ VSYNT+I GSL A L M
Sbjct: 383 ILINGYCKVKRIDEAKQLFNEMIHQ-GLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHT 441
Query: 192 KGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKK 251
G +L T++ LL GF G F A +++ M + +PN+ YN +D + +
Sbjct: 442 NGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRD 501
Query: 252 ALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK---RWYNKSGCGMNKAIFKLLV 307
A +L E+ K + P+ + +I G EG L+EA R + GC ++ + +++
Sbjct: 502 ARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVII 560
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 123/241 (51%), Gaps = 4/241 (1%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A + +M C+ V++++ ++ + ++ +E +F + K GI PD+ +YN++I
Sbjct: 222 AAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVK-GISPDIFTYNSLI 280
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
+ + A+ LL EM I D++TFN L+ G+ ++A+ + +TM M V
Sbjct: 281 QGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVE 340
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
P+V +Y++ + G ++ + +A +L M +K PDVF++ LI G+ ++EAK+
Sbjct: 341 PDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQL 400
Query: 291 YNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAK 347
+N+ G N + L+ +C+ G L A NL K + L + +++D K
Sbjct: 401 FNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCK 460
Query: 348 E 348
+
Sbjct: 461 Q 461
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 154/335 (45%), Gaps = 7/335 (2%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I G+ K KK + G + N Y+ + +R +I + K
Sbjct: 208 TIINGLCKIGETAAAAGLLKKMEEAG-CQPNVVTYSTIIDSHRKDRRVNEALDIFSYMK- 265
Query: 86 YKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
K IS + FT LI + ++ A + +EM N +++FN L+ K
Sbjct: 266 VKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVS 325
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
E G+ K + ++G+EPD+V+Y++++ + + + A L M KG + D+ ++N L
Sbjct: 326 EAQGVLKTMT-EMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNIL 384
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+ G+ R +A++++ M++ + PN SYN + GL ++A L M +
Sbjct: 385 INGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGN 444
Query: 265 NPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNK---AIFKLLVPFVCEKGDLDFAFN 321
P++FT+ L+ GF +G +A R + +K ++ +L+ +C+ G+L A
Sbjct: 445 LPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARK 504
Query: 322 LCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKE 356
L F + + +++ L KE ++EA E
Sbjct: 505 LFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALE 539
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 120/260 (46%), Gaps = 12/260 (4%)
Query: 69 NAKRFRWIEEILE------HQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRN 122
+A FR I++ L H+K I + FT L A+ ++ + +M
Sbjct: 71 DACSFRNIDDALASFNHMLHRKPLPCIIQ--FTKLLSAIVKMGQYYDTVISLTKQMELAG 128
Query: 123 CEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSA 182
+ + + L+ + ++ D + + KLG++P +V++ T+I G A
Sbjct: 129 LSPNIYTLSILINCFSHLQRVDLAFSVLAKII-KLGLQPTIVTFTTLINWLCKVGKFAQA 187
Query: 183 NTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDG 242
L +M +G R D+ T+ T++ G G A A + + M +PNV +Y+ +D
Sbjct: 188 MELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDS 247
Query: 243 LAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS---GCGMN 299
+++ +AL++ M+ K I+PD+FT+ +LI+G N +EA N+ +
Sbjct: 248 HRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPD 307
Query: 300 KAIFKLLVPFVCEKGDLDFA 319
F +LV +C++G + A
Sbjct: 308 IVTFNVLVDTICKEGKVSEA 327
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/218 (18%), Positives = 89/218 (40%), Gaps = 34/218 (15%)
Query: 141 KKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL-DSANTLLYEMEKKGIRLDLI 199
+ D+ F + H+ + P ++ + ++ A V G D+ +L +ME G+ ++
Sbjct: 76 RNIDDALASFNHMLHRKPL-PCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIY 134
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
T + L+ F R A + ++ + ++P + ++ ++ L + +A+EL +M
Sbjct: 135 TLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDM 194
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFA 319
++ PDV+T+ +I G +C+ G+ A
Sbjct: 195 VARGCRPDVYTYTTIING--------------------------------LCKIGETAAA 222
Query: 320 FNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
L K+ C + ++D K+ RV EA ++
Sbjct: 223 AGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDI 260
>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Glycine max]
Length = 892
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 133/300 (44%), Gaps = 39/300 (13%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI +A A + + M C TV ++ L+ A S + E LF ++ +
Sbjct: 261 LIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRER- 319
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G EP++ +Y +I +G +D A +L EM +KG+ ++ FN L+ + G DA
Sbjct: 320 GCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDA 379
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ M + V PNVR+YN + G K +A+ L+ +M +++PDV T+ LI G
Sbjct: 380 VGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHG 439
Query: 278 FVNEGNLEEAKRWYN---KSG---------------CGM--------------------N 299
G ++ A R + + G C M N
Sbjct: 440 LCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKAN 499
Query: 300 KAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ + L+ C+ G ++ A +L KR +E CL + +++D L KE +V++A LVE
Sbjct: 500 EHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVE 559
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 115/264 (43%), Gaps = 4/264 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI Y K M E+A V M + V ++N L+ K D L +
Sbjct: 366 LIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVES- 424
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
+ PD+V+YNT+I + G +DSA+ L M + G D TFN ++ GR +A
Sbjct: 425 KLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEA 484
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+I E++ +V+ N +Y A +DG + + A L M ++E P+ TF +I G
Sbjct: 485 HQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDG 544
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
EG +++A K + +LV V ++ D D A + R S +
Sbjct: 545 LRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPN 604
Query: 335 QAPLQLVVDRLAKELRVEEAKELV 358
+ + R+EEA+E+V
Sbjct: 605 VVTYTAFIKAYCSQGRLEEAEEMV 628
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 136/340 (40%), Gaps = 65/340 (19%)
Query: 72 RFRWIEEILEHQKQYKDISKEGFTARLIAL------YGKAAMFENARKVFDEM----PGR 121
RF ++E++ K+ + LI L Y K AR F + PG
Sbjct: 163 RFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLGNMAVARLFFVRILRCEPGP 222
Query: 122 NCEQTVLSFNAL-LGACVNSKKFDEVD---GLFKDLPHKLGIEPDLVSYNTIIKAFVDKG 177
+ + ++ +L LG C N D+V+ G+F +P + + VSY +I + G
Sbjct: 223 D----LFTYTSLVLGYCRN----DDVERACGVFCVMPRR-----NAVSYTNLIHGLCEAG 269
Query: 178 SLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYN 237
L A M + G + T+ L+ +GR +A ++ M PNV +Y
Sbjct: 270 KLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYT 329
Query: 238 ARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA---------- 287
+D L E + +AL+++ EM K + P V F ALI + G +E+A
Sbjct: 330 VLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESK 389
Query: 288 -----KRWYNKSGCG------MNKAI-----------------FKLLVPFVCEKGDLDFA 319
R YN+ CG M++A+ + L+ +CE G +D A
Sbjct: 390 KVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSA 449
Query: 320 FNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
L + + DQ + L + RV EA +++E
Sbjct: 450 SRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILE 489
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 106/247 (42%), Gaps = 9/247 (3%)
Query: 126 TVLSFNALLGACVNSKKFDEVDGLFKDLPHKLG--IEPDLVSYNTIIKAFVDKGSLDSAN 183
++ S+N LL DE+ L+K++ G + P+L++ NT++ ++ G++ A
Sbjct: 150 SLTSYNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLGNMAVAR 209
Query: 184 TLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
+ + DL T+ +L+LG+ N A ++ M R N SY + GL
Sbjct: 210 LFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMP----RRNAVSYTNLIHGL 265
Query: 244 AIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNK 300
+ +ALE MR P V T+ L+ G EA + + GC N
Sbjct: 266 CEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNV 325
Query: 301 AIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVEL 360
+ +L+ ++C++G +D A + + P ++ K +E+A ++ L
Sbjct: 326 YTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGL 385
Query: 361 GKTNSYC 367
++ C
Sbjct: 386 MESKKVC 392
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 111/281 (39%), Gaps = 39/281 (13%)
Query: 77 EEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGA 136
+ILE K+ + E LI Y KA E+A +F M C ++FN ++
Sbjct: 485 HQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDG 544
Query: 137 CVNSKKFDEVDGLFKDLP--------HKL--------------------------GIEPD 162
K + L +D+ H G +P+
Sbjct: 545 LRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPN 604
Query: 163 LVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWE 222
+V+Y IKA+ +G L+ A ++ +++ +G+ LD +N L+ + G A +
Sbjct: 605 VVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLR 664
Query: 223 TMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG-EMRSKEINPDVFTFYALIKGFVNE 281
M P+ +Y+ + L IEK K+ VG ++ I+ D ++ I +
Sbjct: 665 RMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITT 724
Query: 282 GNLEEAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
E+ + GC N + L+ +C+ G L+ AF+L
Sbjct: 725 VLFEKMA----ECGCVPNLNTYSKLINGLCKVGRLNVAFSL 761
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 116/286 (40%), Gaps = 31/286 (10%)
Query: 53 FRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENAR 112
++ N YT ++ + R EE++ K + LI YG + ++A
Sbjct: 601 YQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAF 660
Query: 113 KVFDEMPGRNCEQTVLSFNALLGACV------------------------NSKKFDEVD- 147
V M G CE + L+++ L+ V N+ + ++D
Sbjct: 661 GVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDF 720
Query: 148 GLFKDLPHKL---GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
G+ L K+ G P+L +Y+ +I G L+ A +L + M + GI I N+L
Sbjct: 721 GITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSL 780
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
L G F +A + ++M+ + ++ SY + GL + +KA + +
Sbjct: 781 LSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLLRCGY 840
Query: 265 NPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLV 307
N D + LI G G +++ N K+GC ++ + +L+
Sbjct: 841 NYDEVAWKVLIDGLAKTGYVDQCSELLNLMEKNGCRLHPETYSMLM 886
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 95/229 (41%), Gaps = 14/229 (6%)
Query: 152 DLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEM---EKKGIRLDLITFNTLLLGF 208
D H+L + L SYN ++ +D +L EM + +LIT NT+L +
Sbjct: 140 DHQHQLAFKLSLTSYNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSY 199
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDV 268
G A A + ++ P++ +Y + + G ++A + M + +
Sbjct: 200 CKLGNMAVARLFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMPRR----NA 255
Query: 269 FTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKR 325
++ LI G G L EA ++ + GC + +LV +CE G A +L
Sbjct: 256 VSYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGE 315
Query: 326 TFSERCLVDQAPLQLVVDRLAKELRVEEA----KELVELGKTNSYCRYN 370
C + +++D L KE R++EA E+VE G S +N
Sbjct: 316 MRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFN 364
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 104/246 (42%), Gaps = 37/246 (15%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A ++ + + ++ + ++ AL+ + K + LFK + + + P+ +++N +I
Sbjct: 484 AHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECL-PNSITFNVMI 542
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
+G + A L+ +M K ++ L T+N L+ F A +I +++ +
Sbjct: 543 DGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQ 602
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
PNV +Y A + + + ++A E+V +++++ + D F + LI +
Sbjct: 603 PNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAY------------ 650
Query: 291 YNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELR 350
GC G LD AF + +R F C P L L K L
Sbjct: 651 ----GC----------------MGLLDSAFGVLRRMFGTGC----EPSYLTYSILMKHLV 686
Query: 351 VEEAKE 356
+E+ K+
Sbjct: 687 IEKHKK 692
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 60/301 (19%), Positives = 114/301 (37%), Gaps = 46/301 (15%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
F+ A ++ + + + V+++ A + A + + +E + + + ++ G+ D YN
Sbjct: 586 FDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNE-GVLLDSFIYN 644
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL---------------------- 205
+I A+ G LDSA +L M G +T++ L+
Sbjct: 645 LLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSL 704
Query: 206 -------LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
+S F ++E M PN+ +Y+ ++GL + A L
Sbjct: 705 TNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHH 764
Query: 259 MRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKAIFKLLVPFVC------- 311
MR I+P +L+ G EA + + A + +C
Sbjct: 765 MREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMN 824
Query: 312 -EKGDLDFAFNL-CKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKTNSYCRY 369
EK + F L C + D+ ++++D LAK V++ EL+ L + N CR
Sbjct: 825 KEKAEAVFCSLLRCGYNY------DEVAWKVLIDGLAKTGYVDQCSELLNLMEKNG-CRL 877
Query: 370 N 370
+
Sbjct: 878 H 878
>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
Length = 602
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 141/300 (47%), Gaps = 8/300 (2%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
+I+G + N+ + V + G+ + Y + R +L+ +
Sbjct: 130 LIKGFFTLRNIPKAVRVMEILEKFGQ--PDVFAYNALINGFCKMNRIDDATRVLDRMRS- 186
Query: 87 KDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
KD S + T +I + A KV +++ NC+ TV+++ L+ A + DE
Sbjct: 187 KDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDE 246
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
L ++ + G++PD+ +YNTII+ +G +D A ++ +E KG D+I++N LL
Sbjct: 247 ALKLMDEMLSR-GLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILL 305
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEIN 265
+ G++ + EK+ M + PNV +Y+ + L + + ++A+ L+ M+ K +
Sbjct: 306 RALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLT 365
Query: 266 PDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
PD +++ LI F EG L+ A + GC + + ++ +C+ G D A +
Sbjct: 366 PDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEI 425
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 136/304 (44%), Gaps = 13/304 (4%)
Query: 80 LEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
LE + D+ R + GK +E K+ +M C+ V++++ L+
Sbjct: 289 LELKGSEPDVISYNILLRALLNQGK---WEEGEKLMTKMFSEKCDPNVVTYSILITTLCR 345
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
K +E L K + K G+ PD SY+ +I AF +G LD A L M G D++
Sbjct: 346 DGKIEEAMNLLKLMKEK-GLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIV 404
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
+NT+L NG+ A +I+ + + PN SYN L +AL ++ EM
Sbjct: 405 NYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEM 464
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLEEA-KRWYNKSGCGMNKAI--FKLLVPFVCEKGDL 316
S I+PD T+ ++I EG ++EA + + C + ++ + +++ C+ +
Sbjct: 465 MSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRI 524
Query: 317 DFAFNLCKRTFSERCLVDQAPLQLVVDRLA----KELRVEEAKELVELGKTNSYC--RYN 370
+ A N+ + C ++ ++++ + + +E A +LV + + Y R +
Sbjct: 525 EDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISEYSFKRLH 584
Query: 371 LKFP 374
FP
Sbjct: 585 RTFP 588
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 103/242 (42%), Gaps = 37/242 (15%)
Query: 158 GIEPDLVSY----------------------------------NTIIKAFVDKGSLDSAN 183
G PD++ N +I F +D A
Sbjct: 119 GYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDAT 178
Query: 184 TLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
+L M K D +T+N ++ S G+ A K+ +++ N +P V +Y ++
Sbjct: 179 RVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEAT 238
Query: 244 AIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLE---EAKRWYNKSGCGMNK 300
+E +AL+L+ EM S+ + PD+FT+ +I+G EG ++ E R G +
Sbjct: 239 MLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDV 298
Query: 301 AIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVEL 360
+ +L+ + +G + L + FSE+C + +++ L ++ ++EEA L++L
Sbjct: 299 ISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKL 358
Query: 361 GK 362
K
Sbjct: 359 MK 360
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 79/177 (44%), Gaps = 4/177 (2%)
Query: 185 LLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLA 244
LL M +KG D+I L+ GF++ A ++ E + +P+V +YNA ++G
Sbjct: 111 LLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALINGFC 169
Query: 245 IEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKA 301
+ A ++ MRSK+ +PD T+ +I + G L+ A + N+ C
Sbjct: 170 KMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVI 229
Query: 302 IFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
+ +L+ +G +D A L S D ++ + KE V+ A E+V
Sbjct: 230 TYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMV 286
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 71/152 (46%), Gaps = 4/152 (2%)
Query: 211 NGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
+G + ++ + ETMV P+V + G + KA+ ++ E+ K PDVF
Sbjct: 102 SGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDVFA 160
Query: 271 FYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTF 327
+ ALI GF +++A R ++ + + +++ +C +G LD A + +
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLL 220
Query: 328 SERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
S+ C ++++ E V+EA +L++
Sbjct: 221 SDNCQPTVITYTILIEATMLEGGVDEALKLMD 252
>gi|255660824|gb|ACU25581.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
Length = 418
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 139/313 (44%), Gaps = 4/313 (1%)
Query: 5 SRLLSCSFSTTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTV 64
S + + T T ++ S + Y E+ R + + + +FR +
Sbjct: 49 SAVFAAILETKGTQRSDXYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVI 108
Query: 65 QRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCE 124
+ L K F+ + E + + F L+ + K A+ VFD +
Sbjct: 109 EHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHXFCKEGEIRLAQSVFDSITKWGLR 168
Query: 125 QTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANT 184
+V+SFN L+ + DE L K + G+ PD+ +Y+ +I + +D AN
Sbjct: 169 PSVVSFNTLMNGYIKIGDLDEGFRL-KSVMQASGVHPDVYTYSVLINGLCKESKMDDANE 227
Query: 185 LLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLA 244
L EM G+ + +TF TL+ G NGR A +I+ M++ ++ P++ +YN + GL
Sbjct: 228 LFDEMLBNGLVPNXVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLC 287
Query: 245 IEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA---KRWYNKSGCGMNKA 301
+ K+A +L+ EM K + PD T+ LI G EG+LE A ++ K +
Sbjct: 288 KKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGXCKEGDLETAFEYRKRMIKENIRXDDV 347
Query: 302 IFKLLVPFVCEKG 314
+ L+ +C++G
Sbjct: 348 AYTALISGLCQEG 360
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 94/181 (51%), Gaps = 1/181 (0%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K + ++A ++FDEM ++F L+ + + D +++ + + + PDL
Sbjct: 218 KESKMDDANELFDEMLBNGLVPNXVTFTTLIDGHCKNGRVDLAMEIYRQMLSQ-SLLPDL 276
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
++YNT+I KG L A+ L+ EM KG++ D IT+ TL+ G G A + +
Sbjct: 277 ITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGXCKEGDLETAFEYRKR 336
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M+ N+R + +Y A + GL E ++ A +++ EM S + P++ T+ +I +G+
Sbjct: 337 MIKENIRXDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEXCKKGD 396
Query: 284 L 284
+
Sbjct: 397 V 397
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 107/248 (43%), Gaps = 10/248 (4%)
Query: 78 EILEHQKQYKDISKEGFTARLIAL------YGKAAMFENARKVFDEMPGRNCEQTVLSFN 131
EI Q + I+K G +++ Y K + ++ M V +++
Sbjct: 151 EIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVHPDVYTYS 210
Query: 132 ALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEK 191
L+ K D+ + LF ++ G+ P+ V++ T+I G +D A + +M
Sbjct: 211 VLINGLCKESKMDDANELFDEMLBN-GLVPNXVTFTTLIDGHCKNGRVDLAMEIYRQMLS 269
Query: 192 KGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKK 251
+ + DLIT+NTL+ G G A + + M ++P+ +Y +DG E +
Sbjct: 270 QSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGXCKEGDLET 329
Query: 252 ALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS-GCGMNKAI--FKLLVP 308
A E M + I D + ALI G EG +A++ + G+ I + +++
Sbjct: 330 AFEYRKRMIKENIRXDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIIN 389
Query: 309 FVCEKGDL 316
C+KGD+
Sbjct: 390 EXCKKGDV 397
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 83/173 (47%), Gaps = 1/173 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K + A +++ +M ++ ++++N L+ + L ++ K
Sbjct: 247 LIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMK- 305
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD ++Y T+I +G L++A M K+ IR D + + L+ G GR DA
Sbjct: 306 GLKPDKITYTTLIDGXCKEGDLETAFEYRKRMIKENIRXDDVAYTALISGLCQEGRSVDA 365
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
EK+ M+++ ++P + +Y ++ + +L+ EM+ P+V T
Sbjct: 366 EKMLREMLSVGLKPEIGTYTMIINEXCKKGDVWTGSKLLKEMQRXGYVPNVVT 418
>gi|410109943|gb|AFV61051.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rotundifolia]
Length = 425
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 142/299 (47%), Gaps = 14/299 (4%)
Query: 86 YKDISKEGFTARL------IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
Y+DI + G+ A L + + K A+ VFD + +V+S+N L+ +
Sbjct: 124 YEDILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIR 183
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
DE L K G++PD+ +Y+ +I + +D AN L EM KG+ + +
Sbjct: 184 LGDLDEGFRL-KSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGV 242
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
TF TL+ G NGR A +I++ M++ ++ P++ +YN + GL + K+A +L+ EM
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEM 302
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLE---EAKRWYNKSGCGMNKAIFKLLVPFVCEKGDL 316
K + PD FT+ LI G EG+L+ E ++ + ++ + L+ +C++G
Sbjct: 303 SMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRS 362
Query: 317 DFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA----KELVELGKTNSYCRYNL 371
A + + S D ++++ K+ V + KE+ G S YN+
Sbjct: 363 VDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNV 421
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 88/180 (48%), Gaps = 1/180 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K + A +++ +M ++ ++++N L+ + L ++ K
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMK- 305
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD +Y T+I +G LD+A M ++ IRLD + + L+ G GR DA
Sbjct: 306 GLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDA 365
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
EK+ M+++ ++P++ +Y ++ + K +L+ EM+ P V T+ L+ G
Sbjct: 366 EKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMNG 425
>gi|255660930|gb|ACU25634.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
Length = 484
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 131/285 (45%), Gaps = 34/285 (11%)
Query: 73 FRWIEE--ILEHQKQYK---------------------DISKEGFT------ARLIALYG 103
FRW+E +LEH ++ D+ K+G +I YG
Sbjct: 32 FRWVERSNLLEHNREIHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYG 91
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
KA + + + K+F +M E+T+ S++AL ++ F + ++ GIEP
Sbjct: 92 KAGIVQESVKLFQKMEELGVERTIKSYDALFKVISRRGRYMMSKRYFNKMVNE-GIEPTR 150
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
++N +I F G +++AN +M+ + I D+IT+NT++ G+ + +AEK +
Sbjct: 151 HTFNVLIWGFFLSGKVETANRFFEDMKSREITPDVITYNTMINGYNRVKKMEEAEKYFLE 210
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M + P V +Y + G A + AL LV EM+ I P+ T+ L+ G N
Sbjct: 211 MKERKIDPTVVTYTTLIKGYASVDRVDDALRLVEEMKGLGIKPNAITYSTLLPGLCNAEK 270
Query: 284 LEEA----KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCK 324
+ EA K +K + +IF L+ C+ G+LD A ++ K
Sbjct: 271 MSEARSILKEMVDKYVAPTDNSIFMRLISSQCKAGNLDAAADVLK 315
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 96/215 (44%), Gaps = 17/215 (7%)
Query: 37 LKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTA 96
LK +VDK+ +D I+ + A ++L+ + ++ G
Sbjct: 278 LKEMVDKYVAPTD-------NSIFMRLISSQCKAGNLDAAADVLKAMIRLSVPTEAGHYG 330
Query: 97 RLIALYGKAAMFENARKVFDEM--------PGRNCEQTVLSFNALLGACVNSKKFDEVDG 148
LI Y KA ++ A K+ D++ P + ++N L+ N+ + + +
Sbjct: 331 VLIEYYCKAGQYDKAVKLLDKLIEKDIILRPQSTLHMELSAYNPLIEYLCNNGQTAKAET 390
Query: 149 LFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
L + L KLG++ D S NT+I+ +GS DSA LL M ++ + + +++L+ +
Sbjct: 391 LVRQL-MKLGVQ-DPTSLNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYDSLVQSY 448
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
ADA+ ++M+ + P+ + + ++ L
Sbjct: 449 LKKNEPADAKAALDSMIENDHLPDSSLFRSVMESL 483
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 107/232 (46%), Gaps = 15/232 (6%)
Query: 64 VQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNC 123
V+++ A+++ LE +++ D + +T LI Y ++A ++ +EM G
Sbjct: 198 VKKMEEAEKY-----FLEMKERKIDPTVVTYTT-LIKGYASVDRVDDALRLVEEMKGLGI 251
Query: 124 EQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSAN 183
+ ++++ LL N++K E + K++ K D + +I + G+LD+A
Sbjct: 252 KPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYVAPTDNSIFMRLISSQCKAGNLDAAA 311
Query: 184 TLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV--RPN------VRS 235
+L M + + + + L+ + G++ A K+ + ++ ++ RP + +
Sbjct: 312 DVLKAMIRLSVPTEAGHYGVLIEYYCKAGQYDKAVKLLDKLIEKDIILRPQSTLHMELSA 371
Query: 236 YNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
YN ++ L QT KA LV ++ + D + LI+G EG+ + A
Sbjct: 372 YNPLIEYLCNNGQTAKAETLVRQLMKLGVQ-DPTSLNTLIRGHSQEGSPDSA 422
>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Vitis vinifera]
Length = 755
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 145/316 (45%), Gaps = 51/316 (16%)
Query: 86 YKDISKEGFTA------RLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
+ + + GFT LI +GK + + +F++M +C+ V+++NAL+
Sbjct: 278 FTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFC- 336
Query: 140 SKKFDEVDGLFKDLPHKL---GIEPDLVSYNTIIKAFVDKG------------------- 177
KF+ + F+ L H++ G++P++V+Y+T I AF +G
Sbjct: 337 --KFERMPKAFEFL-HEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTP 393
Query: 178 ------SLDSANT----------LLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
SL AN L+ E+ + GI+L+++T+ LL G GR +AE+++
Sbjct: 394 NEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVF 453
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
M+N V PN +Y A + G K+ + A +++ EM+ K I PD+ + ++ G NE
Sbjct: 454 RAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNE 513
Query: 282 GNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPL 338
LEEAK +SG N I+ L+ + G A L + + +
Sbjct: 514 SRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTY 573
Query: 339 QLVVDRLAKELRVEEA 354
++D L K V+EA
Sbjct: 574 CALIDGLCKSGLVQEA 589
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 123/255 (48%), Gaps = 4/255 (1%)
Query: 106 AMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVS 165
M E A + F +M S NALL + D FKD+ GI+ + +
Sbjct: 199 GMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAA-GIKRSVFT 257
Query: 166 YNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMV 225
YN +I +G L+ A +L +M++ G D++T+N+L+ G G + I+E M
Sbjct: 258 YNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMK 317
Query: 226 NMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLE 285
+ + P+V +YNA ++ ++ KA E + EM++ + P+V T+ I F EG L+
Sbjct: 318 DADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQ 377
Query: 286 EAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVV 342
EA +++ + N+ + L+ C+ G+L A L + ++ ++
Sbjct: 378 EAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALL 437
Query: 343 DRLAKELRVEEAKEL 357
D L +E R++EA+E+
Sbjct: 438 DGLCEEGRMKEAEEV 452
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 135/308 (43%), Gaps = 6/308 (1%)
Query: 54 RTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDI-SKEGFTARLIALYGKAAMFENAR 112
+ N YT + L R + EE+ ++E +TA L+ + KA E A+
Sbjct: 427 KLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTA-LVHGFIKAKEMEYAK 485
Query: 113 KVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKA 172
+ EM + + +L + +L N + +E L ++ GI + V Y T++ A
Sbjct: 486 DILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKES-GINTNAVIYTTLMDA 544
Query: 173 FVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPN 232
+ G A TLL EM G+ +T+ L+ G +G +A + M + ++PN
Sbjct: 545 YFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPN 604
Query: 233 VRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN 292
V Y A +DGL + A +L EM K + PD + ALI G + GNL+EA +
Sbjct: 605 VAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRD 664
Query: 293 KS---GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKEL 349
+ G ++ + L+ + G + A NL + L D+ ++ +
Sbjct: 665 RMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALG 724
Query: 350 RVEEAKEL 357
+V+EA EL
Sbjct: 725 KVDEALEL 732
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 121/303 (39%), Gaps = 37/303 (12%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
+++ G+ +E +K + F+ + G N YT V AK + ++IL+ K+
Sbjct: 435 ALLDGLCEEGRMKEAEEVFRAMLNAG-VAPNQETYTALVHGFIKAKEMEYAKDILKEMKE 493
Query: 86 -----------------------------YKDISKEGFTAR------LIALYGKAAMFEN 110
+I + G L+ Y K+
Sbjct: 494 KCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATE 553
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A + +EM T +++ AL+ S E F + ++G++P++ Y ++
Sbjct: 554 ALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMS-EIGLQPNVAVYTALV 612
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
+ A L EM KG+ D I + L+ G +G +A + + M+ + +
Sbjct: 613 DGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGME 672
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
++ +Y A + GL+ Q +KA L+ EM K + PD + LIK + G ++EA
Sbjct: 673 LDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALEL 732
Query: 291 YNK 293
N+
Sbjct: 733 QNE 735
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 101/241 (41%), Gaps = 8/241 (3%)
Query: 25 GSVIRGIYKENNL---KRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILE 81
G+++ G+ E+ L K L+ + K+S TN IYT + + + +LE
Sbjct: 504 GTILWGLCNESRLEEAKLLIGEIKESG----INTNAVIYTTLMDAYFKSGQATEALTLLE 559
Query: 82 HQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSK 141
I+ E LI K+ + + A F M + V + AL+ +
Sbjct: 560 EMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNN 619
Query: 142 KFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITF 201
F+ LF ++ K G+ PD ++Y +I + G+L A L M + G+ LDL +
Sbjct: 620 CFEVAKKLFDEMLDK-GMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAY 678
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS 261
L+ G +G+ A + + M+ V P+ Y + + +ALEL EM
Sbjct: 679 TALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAK 738
Query: 262 K 262
+
Sbjct: 739 R 739
Score = 44.7 bits (104), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 78/173 (45%), Gaps = 10/173 (5%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRF----RWIEEILE 81
++I G+ K ++ + F + S++G + N +YT V L F + +E+L+
Sbjct: 575 ALIDGLCKSGLVQEAMHHFGRMSEIG-LQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLD 633
Query: 82 HQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSK 141
I+ +TA LI K + A + D M E + ++ AL+ +S
Sbjct: 634 KGMMPDKIA---YTA-LIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSG 689
Query: 142 KFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGI 194
+ + L ++ K G+ PD V Y +IK + G +D A L EM K+G+
Sbjct: 690 QVQKARNLLDEMIGK-GVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGM 741
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 156/357 (43%), Gaps = 19/357 (5%)
Query: 31 IYKENNLKRLVDKFKKSSDLGRF---RTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYK 87
+Y N++ L+ K K D R N GI TV F + I K +
Sbjct: 45 LYTYNSIILLLCKSGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFD 104
Query: 88 DISKE-------GFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNS 140
++ K+ +TA + L M E A KVF++M R E +++ L+ S
Sbjct: 105 EMEKQRIVPDFIAYTAVICGLCRCGKMME-ADKVFNKMFSRGVEPDEVTYTTLIDGYCKS 163
Query: 141 KKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLIT 200
+ ++ L + G+ P++V+Y + G +D+AN LL+EM KG++L++ T
Sbjct: 164 GEMEKAFSLHNQMVQS-GLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICT 222
Query: 201 FNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMR 260
+N+L+ G +G A K+ E M + P+ ++ +D + KA EL+ EM
Sbjct: 223 YNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREML 282
Query: 261 SKEINPDVFTFYALIKGFVNEGNLEEAKR---WYNKSGCGMNKAIFKLLVPFVCEKGDLD 317
+ + P V TF L+ GF G LE+ +R W + G N + L+ C + ++
Sbjct: 283 DRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMR 342
Query: 318 FAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA----KELVELGKTNSYCRYN 370
+ K + + D +++ K ++EA KE+ E G + YN
Sbjct: 343 CTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYN 399
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 107/220 (48%), Gaps = 7/220 (3%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G PD+VSY+T+I + G L L+ EM+ KG++ +L T+N+++L +G+ DA
Sbjct: 5 GDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDA 64
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
E++ M+N + P+ Y +DG + A +L EM + I PD + A+I G
Sbjct: 65 ERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICG 124
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
G + EA + +NK G ++ + L+ C+ G+++ AF+L + +
Sbjct: 125 LCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPN 184
Query: 335 QAPLQLVVDRLAKELRVEEAKELVE----LGKTNSYCRYN 370
+ D L K +V+ A EL+ G + C YN
Sbjct: 185 VVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYN 224
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 108/235 (45%), Gaps = 5/235 (2%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K+ A K+ +EM ++F L+ A + + + L +++ + G++P +
Sbjct: 232 KSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDR-GLQPTV 290
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
+++N ++ F G L+ LL M +KGI + T+N+L+ + +I++
Sbjct: 291 ITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKG 350
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M V P+ +YN + G + K+A L EM K N ++ ++IKGF +
Sbjct: 351 MCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKK 410
Query: 284 LEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQ 335
+ EA+ + + G + I+ L V +G+++ A LC E C +++
Sbjct: 411 ISEARELFEEMRREGMAADAEIYNLFVDISYGEGNMETALELCDEAI-ENCFLNR 464
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 88/192 (45%), Gaps = 15/192 (7%)
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
M+ +G D+++++T++ G+ G K+ + M ++PN+ +YN+ + L +
Sbjct: 1 MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKA------- 301
A ++ EM ++ I PD + LI GF GN++ A + +++ M K
Sbjct: 61 VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDE----MEKQRIVPDFI 116
Query: 302 IFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA----KEL 357
+ ++ +C G + A + + FS D+ ++D K +E+A ++
Sbjct: 117 AYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQM 176
Query: 358 VELGKTNSYCRY 369
V+ G T + Y
Sbjct: 177 VQSGLTPNVVTY 188
>gi|255578729|ref|XP_002530223.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530270|gb|EEF32170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 517
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 139/303 (45%), Gaps = 12/303 (3%)
Query: 59 IYTGTVQRLANAKRFRWIEEILEHQKQYKDI----SKEGFTARLIALYGKAAMFENARKV 114
++ + LA+ K+FR + K Y + S + + L+ L+ + A
Sbjct: 148 VFDSLFKTLAHMKKFRNATDTFLQMKGYGFLPTVESCNAYLSSLLDLH----RVDIALAF 203
Query: 115 FDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFV 174
+ EM V + N ++ A S K ++ +F+++ +GI P+ SYNT+I +
Sbjct: 204 YKEMRRCRISPNVYTRNMVMRAFCKSGKLEKAVQVFEEME-SVGISPNDTSYNTLIMGYC 262
Query: 175 DKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVR 234
KG L+SA L M KG+ +++TFN+L+ GF G+ +A K++ M +NV PN
Sbjct: 263 RKGLLNSAVKLKNSMRAKGVEANVVTFNSLIDGFCKEGKLHEASKVFSEMKVLNVAPNTI 322
Query: 235 SYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK---RWY 291
+YN ++G + ++ L EM + D+ T+ ALI G EG ++A +
Sbjct: 323 TYNTLINGHSQMGNSEMGRRLYEEMSRNGVKADILTYNALILGLCKEGKTKKAAYMVKEL 382
Query: 292 NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRV 351
+K N + F L+ C + + D AF L K C ++ ++V K
Sbjct: 383 DKENLVPNASTFSALISGQCIRNNSDRAFQLYKSMVRIGCHPNEQTFNMLVSAFCKNEDF 442
Query: 352 EEA 354
E A
Sbjct: 443 EGA 445
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 77/169 (45%), Gaps = 1/169 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K A KVF EM N +++N L+ + L++++
Sbjct: 292 LIDGFCKEGKLHEASKVFSEMKVLNVAPNTITYNTLINGHSQMGNSEMGRRLYEEMSRN- 350
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++ D+++YN +I +G A ++ E++K+ + + TF+ L+ G A
Sbjct: 351 GVKADILTYNALILGLCKEGKTKKAAYMVKELDKENLVPNASTFSALISGQCIRNNSDRA 410
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINP 266
+++++MV + PN +++N + + + A ++ EM + P
Sbjct: 411 FQLYKSMVRIGCHPNEQTFNMLVSAFCKNEDFEGAFLVLMEMFERCFTP 459
>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 124/257 (48%), Gaps = 4/257 (1%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K + A +++ E+ + V + N ++ A ++K + D+ K G+ PD+
Sbjct: 74 KVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEK-GVFPDV 132
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
V+YNT+I A+ +G L+ A L+ M KG++ + T+N ++ G G++ A+ + +
Sbjct: 133 VTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDE 192
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M+ + + P+ +YN L A + EM S+ + PD+ +F ALI G
Sbjct: 193 MLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGC 252
Query: 284 LEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL 340
L++A +++ +G + I+ +L+ C G + A + + C++D
Sbjct: 253 LDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNT 312
Query: 341 VVDRLAKELRVEEAKEL 357
+++ L KE + EA EL
Sbjct: 313 ILNGLCKEKMLSEADEL 329
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 94/184 (51%), Gaps = 1/184 (0%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K + A+ V DEM ++N LL C + + + +F ++P + G+ PDL
Sbjct: 179 KTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQ-GVVPDL 237
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
VS++ +I G LD A +M+ G+ D + + L+ GF NG ++A K+ +
Sbjct: 238 VSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDE 297
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M+ +V +YN L+GL EK +A EL EM + + PD +TF LI G+ +GN
Sbjct: 298 MLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGN 357
Query: 284 LEEA 287
+ +A
Sbjct: 358 MNKA 361
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 105/219 (47%), Gaps = 36/219 (16%)
Query: 110 NARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPD------- 162
+A ++FDEMP + ++SF+AL+G + D+ F+D+ + G+ PD
Sbjct: 220 DAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNA-GLAPDNVIYTIL 278
Query: 163 ----------------------------LVSYNTIIKAFVDKGSLDSANTLLYEMEKKGI 194
+V+YNTI+ + L A+ L EM ++G+
Sbjct: 279 IGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGV 338
Query: 195 RLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALE 254
D TF TL+ G+ +G A ++E M+ N++P+V +YN +DG + +K E
Sbjct: 339 FPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNE 398
Query: 255 LVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK 293
L +M S+ I P+ ++ LI G+ N G + EA R +++
Sbjct: 399 LWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDE 437
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 87/170 (51%), Gaps = 1/170 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI Y A +++DEM + E T+++ N ++ + + D ++ K
Sbjct: 418 LINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLK- 476
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
GI PD ++YNT+I F+ + ++D A L+ +ME G+ D+IT+N +L GF GR +A
Sbjct: 477 GIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEA 536
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPD 267
E I M+ V P+ +Y + ++G + K+A + EM + PD
Sbjct: 537 ELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 586
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 130/271 (47%), Gaps = 8/271 (2%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLG---RFRTNTGIYTGTVQRLANAKRFRWIEEILEH 82
+++ G+ KE L + F + ++ G F T T + G + N + + E++
Sbjct: 312 TILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLING-YSKDGNMNKAVTLFEMMIQ 370
Query: 83 QKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKK 142
+ D+ LI + K + E +++++M R +S+ L+ N
Sbjct: 371 RNLKPDVVTYN---TLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGC 427
Query: 143 FDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFN 202
E L+ ++ K G E +++ NTI+K + G+ A+ L M KGI D IT+N
Sbjct: 428 VSEAFRLWDEMVEK-GFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYN 486
Query: 203 TLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
TL+ GF A + M N + P+V +YN L+G + + + ++A ++ +M +
Sbjct: 487 TLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIER 546
Query: 263 EINPDVFTFYALIKGFVNEGNLEEAKRWYNK 293
+NPD T+ +LI G V + NL+EA R +++
Sbjct: 547 GVNPDRSTYTSLINGHVTQNNLKEAFRVHDE 577
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 102/228 (44%), Gaps = 14/228 (6%)
Query: 122 NCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDS 181
NC L F+ L+ V ++K E F+ L K G+ + + N+++ V G +D
Sbjct: 22 NCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSK-GLCVSINACNSLLGGLVKVGWVDL 80
Query: 182 ANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLD 241
A + E+ + G+++++ T N ++ N + + + M V P+V +YN ++
Sbjct: 81 AWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLIN 140
Query: 242 GLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGM 298
+ ++A EL+ M K + P VFT+ A+I G G AK + K G
Sbjct: 141 AYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSP 200
Query: 299 NKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLA 346
+ A + +L+ C ++ A +R F D+ P Q VV L
Sbjct: 201 DTATYNILLVECCRNDNMMDA----ERIF------DEMPSQGVVPDLV 238
>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
Length = 745
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 131/279 (46%), Gaps = 6/279 (2%)
Query: 15 TATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFR 74
T T I + R + E K L + + + D+ T T + G +R A+ F+
Sbjct: 394 TDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEV-TYTVLIDGYCKRGKMAEAFQ 452
Query: 75 WIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL 134
+++ ++ T L K + A ++ EM + E ++N+L+
Sbjct: 453 MHNAMVQRGVTPNVVTYTALTDGLC----KQGDVQAANELLHEMSNKGLELNACTYNSLI 508
Query: 135 GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGI 194
+ ++ D+ ++PD+ +Y T+I A G LD A++LL EM KGI
Sbjct: 509 NGLCKAGYLEQAMRTMADM-DTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGI 567
Query: 195 RLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALE 254
+ ++T+N L+ GF +GR +K+ + M+ N+ PN +YN+ + IE K E
Sbjct: 568 KPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTE 627
Query: 255 LVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK 293
+ MRS+++ P+ T+ LIKG N++EA ++++
Sbjct: 628 IYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDE 666
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 144/354 (40%), Gaps = 56/354 (15%)
Query: 18 ATGPKFI--GSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRW 75
A+ P + G +I G L+ V K G N +YT V L + W
Sbjct: 286 ASAPDVVTYGILIHGHCALGELENAV-KLLDEMVAGGVEPNATVYTSVVALLCDKG---W 341
Query: 76 IEE---ILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNA 132
I + ++E Q K I E +++ + +AR+ FDEM
Sbjct: 342 ISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEM-------------- 387
Query: 133 LLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKK 192
+ G+ D V+Y T+I L+ A LL EM +
Sbjct: 388 ----------------------QRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWAR 425
Query: 193 GIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKA 252
+ +D +T+ L+ G+ G+ A+A ++ MV V PNV +Y A DGL + + A
Sbjct: 426 RLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAA 485
Query: 253 LELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKAIFK-------L 305
EL+ EM +K + + T+ +LI G G LE+A R + M+ A K
Sbjct: 486 NELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMR----TMADMDTACLKPDVYTYTT 541
Query: 306 LVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
L+ +C+ GDLD A +L + + ++++ RVE K+L++
Sbjct: 542 LIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLD 595
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 116/242 (47%), Gaps = 15/242 (6%)
Query: 136 ACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIR 195
A ++ DE LF++LPHK ++ SYN ++KA D G + A L EM
Sbjct: 237 AVLSRLPLDEAIELFQELPHK-----NVCSYNILLKALCDAGRVKDARQLFDEMASAP-- 289
Query: 196 LDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALEL 255
D++T+ L+ G + G +A K+ + MV V PN Y + + L + AL +
Sbjct: 290 -DVVTYGILIHGHCALGELENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRV 348
Query: 256 VGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCE 312
V +M +++ D + ++ GF N+G+L A+RW++ + G + + ++ +C
Sbjct: 349 VEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCR 408
Query: 313 KGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA----KELVELGKTNSYCR 368
+L+ A L + ++ R VD+ +++D K ++ EA +V+ G T +
Sbjct: 409 AVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVT 468
Query: 369 YN 370
Y
Sbjct: 469 YT 470
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 110/224 (49%), Gaps = 13/224 (5%)
Query: 105 AAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKL--GIEP 161
A ++AR++FDEM V+++ L+ G C E++ K L + G+EP
Sbjct: 272 AGRVKDARQLFDEMAS---APDVVTYGILIHGHCA----LGELENAVKLLDEMVAGGVEP 324
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
+ Y +++ DKG + A ++ +M ++ + LD + T+L GF + G A + +
Sbjct: 325 NATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWF 384
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
+ M + + +Y ++GL + ++A +L+ EM ++ ++ D T+ LI G+
Sbjct: 385 DEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKR 444
Query: 282 GNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
G + EA + +N + G N + L +C++GD+ A L
Sbjct: 445 GKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANEL 488
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 111/272 (40%), Gaps = 6/272 (2%)
Query: 56 NTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFT-ARLIALYGKAAMFENARKV 114
N YT L + E+L H+ K + T LI KA E A +
Sbjct: 465 NVVTYTALTDGLCKQGDVQAANELL-HEMSNKGLELNACTYNSLINGLCKAGYLEQAMRT 523
Query: 115 FDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFV 174
+M + V ++ L+ A S D L +++ K GI+P +V+YN ++ F
Sbjct: 524 MADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDK-GIKPTIVTYNVLMNGFC 582
Query: 175 DKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVR 234
G ++ LL M +K I + T+N+L+ + +I++ M + +V PN
Sbjct: 583 MSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNEN 642
Query: 235 SYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN-- 292
+YN + G + K+AL EM K ++ ALI+ + EA+ ++
Sbjct: 643 TYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEARELFHDM 702
Query: 293 -KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLC 323
K G ++ + + +L+ LC
Sbjct: 703 RKEGLTAESDVYDFYIDLNFNEDNLESTLALC 734
>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 132/284 (46%), Gaps = 39/284 (13%)
Query: 114 VFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAF 173
+F +M +C TV ++ ++ A S + E LF ++ + G EP++ +Y +I A
Sbjct: 61 IFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRER-GCEPNIHTYTVMINAM 119
Query: 174 VDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNV 233
+ L+ +L EM +KG+ + T+N L+ G+ G A++I + M + + PN
Sbjct: 120 CKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNE 179
Query: 234 RSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG---------------F 278
R+YN + G +K +A+ L+ +M + P V T+ +LI G
Sbjct: 180 RTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNL 239
Query: 279 VNE--------------------GNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGD 315
+NE G +EEA +N + G N+ I+ L+ C+ G
Sbjct: 240 MNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGK 299
Query: 316 LDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+D A +L R +E CL + + ++D L KE +V+EA L+E
Sbjct: 300 MDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLME 343
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/358 (21%), Positives = 151/358 (42%), Gaps = 46/358 (12%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
++ +++ ++ F + + G N YT + + + IL+ +
Sbjct: 80 IVHALFESGRRMEAINLFSEMRERG-CEPNIHTYTVMINAMCKETKLEEGRRILDEMVEK 138
Query: 87 KDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQ--------------------- 125
+ LI Y K M E A+++ D M +C
Sbjct: 139 GLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRA 198
Query: 126 --------------TVLSFNALL-GACVNSKKFDEVDGLFK--DLPHKLGIEPDLVSYNT 168
+V+++N+L+ G C K +D ++ +L ++ G+ PD +Y+
Sbjct: 199 MALLSKMLESRLTPSVVTYNSLIHGQC----KIGYLDSAYRLLNLMNENGVVPDQWTYSV 254
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
I KG ++ AN L +++KGI+ + + + L+ G+ G+ DA + + M+ +
Sbjct: 255 FIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTED 314
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
PN +YNA +DGL E++ ++AL L+ M K + V T+ LI + EG+ + A
Sbjct: 315 CLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAH 374
Query: 289 RWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVD 343
R ++ SG + I+ + C +G++ A ++ F + D LV+D
Sbjct: 375 RILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVID 432
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 92/210 (43%), Gaps = 5/210 (2%)
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
+TA LI Y KA ++A + D M +C ++NAL+ +K E L + +
Sbjct: 287 YTA-LIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESM 345
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
K G++ + +Y +I A + +G D A+ +L +M G + D+ + + F + G
Sbjct: 346 IQK-GLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGN 404
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
+AE + M V P+ +Y +D A +++ M +P T+
Sbjct: 405 IKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSC 464
Query: 274 LIKGFVNEGNLEEAKRWYNKSGCGMNKAIF 303
LIK + E E K++ N + C +F
Sbjct: 465 LIKHLLKE---ELTKKYKNVALCDSIPNVF 491
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 93/208 (44%), Gaps = 6/208 (2%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K E A +F+ + + + + + AL+ + K D+ + L + + + P+
Sbjct: 261 KKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCL-PNS 319
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
+YN +I + + A L+ M +KG++ + T+ L++ G F A +I +
Sbjct: 320 STYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQ 379
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
MV+ +P+V Y A + K+A +++ M + + PD T+ +I + G
Sbjct: 380 MVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGL 439
Query: 284 LEEA----KRWYNKSGCGMNKAIFKLLV 307
L A KR ++ +GC + + L+
Sbjct: 440 LNPAFDVLKRMFD-TGCDPSHHTYSCLI 466
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 74/177 (41%), Gaps = 5/177 (2%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K FE A ++F++M C + ++ L+ + LF + + G+ P
Sbjct: 500 KMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNER-GVSPSE 558
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
YN+++ + G A L+ M + G L + N L G Y G A+ ++
Sbjct: 559 AIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSN 618
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG--EMRSKEINPDVFTFYALIKGF 278
++ + ++ +DGL + EL+G E R +I+P T+ LI+G
Sbjct: 619 LLQCGYNDDEVAWKILIDGLLKNGLSDGCSELLGVMEARGCQIHPQ--TYRMLIEGL 673
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 59/304 (19%), Positives = 111/304 (36%), Gaps = 41/304 (13%)
Query: 38 KRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTAR 97
R++D+ S ++ + IYT + + E+++ + + + + T
Sbjct: 374 HRILDQMVSSG----YQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFE-RGVMPDALTYT 428
Query: 98 L-IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN---SKKF------DEVD 147
L I YG + A V M C+ + +++ L+ + +KK+ D +
Sbjct: 429 LVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIP 488
Query: 148 GLF---------------------KDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLL 186
+F K L H G P++ +Y +I G L A L
Sbjct: 489 NVFFADVADVWKMMKFETALELFEKMLEH--GCSPNINTYAKLIIGLCKVGRLGVAQKLF 546
Query: 187 YEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIE 246
M ++G+ +N+LL G + DA ++ M+ P + S N GL E
Sbjct: 547 DHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEE 606
Query: 247 KQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEG---NLEEAKRWYNKSGCGMNKAIF 303
+KA + + N D + LI G + G E GC ++ +
Sbjct: 607 GSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKNGLSDGCSELLGVMEARGCQIHPQTY 666
Query: 304 KLLV 307
++L+
Sbjct: 667 RMLI 670
Score = 38.9 bits (89), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 62/149 (41%), Gaps = 3/149 (2%)
Query: 96 ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKF-DEVDGLFKDLP 154
A+LI K A+K+FD M R + +N+LL C + D V + +
Sbjct: 527 AKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMME 586
Query: 155 HKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRF 214
H G P L S N + ++GS + A + + + G D + + L+ G NG
Sbjct: 587 H--GHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKNGLS 644
Query: 215 ADAEKIWETMVNMNVRPNVRSYNARLDGL 243
++ M + + ++Y ++GL
Sbjct: 645 DGCSELLGVMEARGCQIHPQTYRMLIEGL 673
>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 616
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 127/296 (42%), Gaps = 49/296 (16%)
Query: 113 KVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGL----------FKDLPHKLGIEPD 162
++ ++P CE ++S+NA+L +K++D+V+ L +P G PD
Sbjct: 199 ELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVHEALSQMPEH-GCTPD 257
Query: 163 LVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWE 222
L Y TII G + AN +L M G++ +++ +NT+L G S R+ +AE +
Sbjct: 258 LRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLA 317
Query: 223 TMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEG 282
M + + ++N +D + +EL+ +M PDV T+ +I GF EG
Sbjct: 318 EMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEG 377
Query: 283 NLEEA-----------------------------KRWYN---------KSGCGMNKAIFK 304
++EA +RW + + GC N F
Sbjct: 378 LVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFN 437
Query: 305 LLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVEL 360
L+ F+C+KG + A L K+ C D V+D L K + EEA EL+ +
Sbjct: 438 TLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNV 493
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 120/274 (43%), Gaps = 17/274 (6%)
Query: 107 MFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSY 166
+ +A V DEMP R C T + +L A F + L H G D +
Sbjct: 123 LIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVL-HAKGCTLDSGNC 181
Query: 167 NTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVN 226
N ++ A ++G +D LL ++ G D++++N +L G R+ D E++ MV
Sbjct: 182 NLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVR 241
Query: 227 MN----------VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
++ P++R Y +DG+ + + A +++ M S + P+V + ++K
Sbjct: 242 VHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLK 301
Query: 277 GFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV 333
G + EEA+ + C ++ F +LV F C+ G +D L ++ C+
Sbjct: 302 GLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIP 361
Query: 334 DQAPLQLVVDRLAKELRVEEAKELVELGKTNSYC 367
D V++ KE V+EA V L K S C
Sbjct: 362 DVITYTTVINGFCKEGLVDEA---VMLLKNMSAC 392
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/414 (19%), Positives = 169/414 (40%), Gaps = 83/414 (20%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEIL-EHQKQ 85
V+ I ++ + V+ +K G + Y ++ L AKR+ +EE++ E +
Sbjct: 184 VVSAICEQGCVDEGVELLRKLPSFG-CEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRV 242
Query: 86 YKDISK---EGFT------ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGA 136
++ +S+ G T A +I K E A + MP + V+ +N +L
Sbjct: 243 HEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKG 302
Query: 137 CVNSKKFDEVDGLF-----KDLPH-----------------------------KLGIEPD 162
++++++E + L +D P + G PD
Sbjct: 303 LCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPD 362
Query: 163 LVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWE 222
+++Y T+I F +G +D A LL M G + + I++ +L G R+ DA+++
Sbjct: 363 VITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELIS 422
Query: 223 TMVNMNVRPN-----------------------------------VRSYNARLDGLAIEK 247
M+ PN + SY+ +DGL
Sbjct: 423 HMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAG 482
Query: 248 QTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFK 304
+T++ALEL+ M +K I P+ + ++ EG ++ + ++ + + A++
Sbjct: 483 KTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYN 542
Query: 305 LLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
++ +C++ + D A + S C+ +++ +++ LA E V EA++L+
Sbjct: 543 AVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLL 596
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 103/237 (43%), Gaps = 2/237 (0%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
+VI G KE + V K S G + NT YT ++ L A+R+ +E++ H Q
Sbjct: 368 TVINGFCKEGLVDEAVMLLKNMSACG-CKPNTISYTIVLKGLCRAERWVDAQELISHMIQ 426
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
+ LI K + E A ++ +M C ++S++ ++ + K +E
Sbjct: 427 QGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEE 486
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
L + +K GI P+ + Y+++ A +G D + ++ +R D +N ++
Sbjct: 487 ALELLNVMINK-GITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVI 545
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
A + MV+ PN +Y + GLA E ++A +L+ E+ S+
Sbjct: 546 SSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSELCSR 602
>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
Length = 962
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 127/265 (47%), Gaps = 4/265 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI Y NA ++ D M CE ++N L+ K + F+++ +
Sbjct: 491 LINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMV-EC 549
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ P+ VSY T+I G +D A +LL ME+ G ++ ++N ++ G RF++A
Sbjct: 550 GLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEA 609
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
EKI + M + PNV +Y +DGL +T+ A ++ +M ++ P+++T+ +LI G
Sbjct: 610 EKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYG 669
Query: 278 FVNEGNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
EG +EA+ + + G ++ F L+ G +D AF L +R C +
Sbjct: 670 LCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPN 729
Query: 335 QAPLQLVVDRLAKELRVEEAKELVE 359
+++ L KE + E K V+
Sbjct: 730 YRTYSVLLKGLQKECLLLEEKVAVQ 754
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 141/315 (44%), Gaps = 16/315 (5%)
Query: 54 RTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLI---ALYGKAAM--- 107
R N YT + L+ + + Y + KEG + AL + +
Sbjct: 377 RPNVQTYTALISGLSRLGKLEVAIGL------YHKMLKEGLVPNTVTYNALINELCVGGR 430
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
F A K+F M G ++N ++ ++ LF+ + K+G P +V+YN
Sbjct: 431 FSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKML-KMGPLPTVVTYN 489
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
T+I ++ KG++++A LL M++ G D T+N L+ GF G+ A ++ MV
Sbjct: 490 TLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVEC 549
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+ PN SY +DG + + + AL L+ M NP+V ++ A+I G E EA
Sbjct: 550 GLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEA 609
Query: 288 KRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDR 344
++ +K G N + L+ +C G FAF + +CL + ++
Sbjct: 610 EKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYG 669
Query: 345 LAKELRVEEAKELVE 359
L +E + +EA+ L++
Sbjct: 670 LCQEGKADEAEILLK 684
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 118/266 (44%), Gaps = 10/266 (3%)
Query: 66 RLANAKRFRWIEEILEHQKQYKDISKEGF------TARLIALYGKAAMFENARKVFDEMP 119
R+ K R EEI +IS GF L+ K M E AR ++ +M
Sbjct: 173 RILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQML 232
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL 179
+ ++L+FN L+ K E + + + + + PD+ +Y ++I +L
Sbjct: 233 NSGIQPSLLTFNTLINILSKKGKVREAELILSQI-FQYDLSPDVFTYTSLILGHCRNRNL 291
Query: 180 DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNAR 239
D A + M K+G + +T++TL+ G + GR +A + E M+ + P V +Y
Sbjct: 292 DLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLP 351
Query: 240 LDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGC 296
+ L + ++A+ELV M+ + P+V T+ ALI G G LE A Y+ K G
Sbjct: 352 ITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGL 411
Query: 297 GMNKAIFKLLVPFVCEKGDLDFAFNL 322
N + L+ +C G A +
Sbjct: 412 VPNTVTYNALINELCVGGRFSTALKI 437
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/373 (20%), Positives = 159/373 (42%), Gaps = 29/373 (7%)
Query: 21 PKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEIL 80
P ++I G K+ + + ++ ++G N Y + L+ RF E+I
Sbjct: 555 PVSYTTLIDGHSKDGKVDIALSLLERMEEMG-CNPNVESYNAVINGLSKENRFSEAEKIC 613
Query: 81 EHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNS 140
+ + + LI + + A K+F +M R C + ++++L+
Sbjct: 614 DKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQE 673
Query: 141 KKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLIT 200
K DE + L K++ K G+ PD V++ ++I FV G +D A LL M G + + T
Sbjct: 674 GKADEAEILLKEMERK-GLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRT 732
Query: 201 FNTLLLGF------------------YS------NGRFADAEKIWETMVNMNVRPNVRSY 236
++ LL G YS + F + M + P + +Y
Sbjct: 733 YSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTY 792
Query: 237 NARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK--- 293
+ + GL + + +A +LV +M+ + PD +Y+L+ ++ A + ++
Sbjct: 793 STLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEA 852
Query: 294 SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEE 353
G ++ +I++ L+ +C+ G ++ A L + D+ ++VD L KE ++
Sbjct: 853 KGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDL 912
Query: 354 AKELVELGKTNSY 366
+L+ + ++ ++
Sbjct: 913 CMKLLHIMESKNF 925
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 78/173 (45%), Gaps = 1/173 (0%)
Query: 102 YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEP 161
+ K FE + M CE T+ +++ L+ +F E + L KD+ + G P
Sbjct: 764 HEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKER-GFCP 822
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
D Y +++ A +D A + + +E KG +L L + L+ G+ +A+ ++
Sbjct: 823 DREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALF 882
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYAL 274
+ M+ + + +DGL E + ++L+ M SK P++ T+ L
Sbjct: 883 DNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVIL 935
>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
Length = 814
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 126/283 (44%), Gaps = 16/283 (5%)
Query: 44 FKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIAL-- 101
F + +G + ++T V+ L AKR + E+ + + K GF IA
Sbjct: 212 FHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREV------FGQMEKCGFPPDAIAYNT 265
Query: 102 ----YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
KA + A KV D M + C T +++ L+ + + + + LF+ +
Sbjct: 266 MIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAAS- 324
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G P+ V Y ++I F G + A +L EM + G R D+IT ++ G +G F A
Sbjct: 325 GFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQA 384
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
K +E M+ +PNV +Y + GL+ + A ++ M + PD T+ L+ G
Sbjct: 385 AKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDG 444
Query: 278 FVNEGNLEEAKRW---YNKSGCGMNKAIFKLLVPFVCEKGDLD 317
F G L+EA + +K N ++ LV +C+ G ++
Sbjct: 445 FCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVE 487
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 138/332 (41%), Gaps = 20/332 (6%)
Query: 39 RLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFR-WIEEILEHQKQYKDISKEGFTAR 97
+L+D+ K S N +Y+ V+ L + ++++ E K + G
Sbjct: 456 QLLDELDKCSS----SPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCS 511
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSK--KFDEVDGLFKDLPH 155
+I K + A ++F M C+ ++N L+ S+ + + L DL
Sbjct: 512 IIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDL-E 570
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
+G PD V+Y + G +D A +L E +G D++ + L G G+
Sbjct: 571 MVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVD 630
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
A +++ MV P+ +Y ++GL K+ + A + EM K P V T+ AL+
Sbjct: 631 RAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALV 690
Query: 276 KGFVNEGNLEEAKRWYNKSGCGM--------NKAIFKLLVPFVCEKGDLDFAFNLCKRTF 327
+ + GN++EA + GM + I+ L+ C+ +D A L +
Sbjct: 691 QALCHAGNVDEAFHRFE----GMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMI 746
Query: 328 SERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
S + + D L + + E+A+EL++
Sbjct: 747 SRGNVPTAVTSASLFDGLVRSGKTEKAQELLQ 778
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/311 (19%), Positives = 123/311 (39%), Gaps = 47/311 (15%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSF----NALLGACVNSKKFDEVDGLFKDL 153
LI + + ++A F+ M + C+ + +F + L A ++ K F+ +F ++
Sbjct: 160 LIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFE----VFHEM 215
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
+ PD + +++ + + A + +MEK G D I +NT++ G G
Sbjct: 216 MAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGH 275
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
+A K+ + M+ P +Y ++ L ++A EL M + P+ + +
Sbjct: 276 AQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTS 335
Query: 274 LIKGFVNEGNLEEAKRWYN--------------------------------------KSG 295
LI GF G ++EA ++ + G
Sbjct: 336 LIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGG 395
Query: 296 CGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAK 355
C N + ++ + + G + AF + K + C D ++D K R++EA
Sbjct: 396 CKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAA 455
Query: 356 ELV-ELGKTNS 365
+L+ EL K +S
Sbjct: 456 QLLDELDKCSS 466
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 76/155 (49%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K E+A K FDEM G+ + TV ++ AL+ A ++ DE F+ + + + +
Sbjct: 660 KGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSV 719
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
+ Y+ +I F +D+A L +M +G +T +L G +G+ A+++ +
Sbjct: 720 MIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQE 779
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
M P+ ++ A LDGL ++ K L+LV E
Sbjct: 780 MAAGGSPPHAATFTAILDGLRKSDESGKLLKLVQE 814
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 93/210 (44%), Gaps = 8/210 (3%)
Query: 76 IEEILEHQKQYKDISKEGFTARLIALYGKA------AMFENARKVFDEMPGRNCEQTVLS 129
I E+ K ++ S G+ A ++A + A +F EM + +
Sbjct: 591 IGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAA 650
Query: 130 FNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEM 189
+ ++ + KK ++ F ++ K G +P + +Y +++A G++D A M
Sbjct: 651 YCCIINGLIKGKKLEDACKFFDEMIGK-GQKPTVATYTALVQALCHAGNVDEAFHRFEGM 709
Query: 190 EKKG-IRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
+G + ++ ++ L+ GF + A K++E M++ P + + DGL +
Sbjct: 710 LARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGK 769
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGF 278
T+KA EL+ EM + P TF A++ G
Sbjct: 770 TEKAQELLQEMAAGGSPPHAATFTAILDGL 799
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 94/212 (44%), Gaps = 4/212 (1%)
Query: 150 FKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFY 209
F+ + G + D+ +YN ++ V + + + EM K GI + +FN L+ F
Sbjct: 106 FRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFA 165
Query: 210 SNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE-INPDV 268
R DA +E M +P++ ++ +D L +KA E+ EM + + PD
Sbjct: 166 RTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDR 225
Query: 269 FTFYALIKGFVNEGNLEEAKRWYNK-SGCGM--NKAIFKLLVPFVCEKGDLDFAFNLCKR 325
A+++ + ++EA+ + + CG + + ++ + + G A +
Sbjct: 226 ALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDN 285
Query: 326 TFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
++ C+ + ++V+ L K +E A+EL
Sbjct: 286 MLAKACVPTEVTYGILVNSLCKAGTLERAEEL 317
>gi|125555457|gb|EAZ01063.1| hypothetical protein OsI_23091 [Oryza sativa Indica Group]
Length = 552
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 130/278 (46%), Gaps = 5/278 (1%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMP 119
Y+ V LA+A R ++ ++ E F L A+ +A + A K+F+ M
Sbjct: 122 YSTVVSALADAGRVDDAVALVHEMVADGVVAAEAFNPVLRAML-RAGDVKGAAKLFEFMQ 180
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL 179
+ C T ++N L+ + + G+ + + + G+ P +++Y ++ V G +
Sbjct: 181 LKGCVPTAATYNVLVHGLLVCGRAGAAMGVMRRMERE-GVVPGVMTYGAVVDGLVRCGRV 239
Query: 180 DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNAR 239
A + EME+ G+ + ++T++ GF +G A K+WE MV VRPNV Y+A
Sbjct: 240 KDAWKVAEEMERNGLARNEFVYSTVITGFCKSGEIDCALKVWEAMVASPVRPNVVLYSAM 299
Query: 240 LDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGC 296
+ GLA + +A L EM + P++ T+ ++I+G+ G+ A + + +GC
Sbjct: 300 IGGLANFGKMTEAELLFREMIDSKCAPNIITYGSMIQGYFKIGDTSRALSVWEEMIGAGC 359
Query: 297 GMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
N + +L+ +C G L A + K C D
Sbjct: 360 MPNAVSYSILINGLCNVGRLKDAMMVWKHMLDRGCAPD 397
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 101/217 (46%), Gaps = 18/217 (8%)
Query: 119 PGRNCEQTVLSFNALLGACVNS--------KKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
PGR T+LSFN LL CV S + D + ++ + PD +Y+T++
Sbjct: 69 PGR-LAPTLLSFNLLL-KCVCSSLVPRDPRRYLDVALRILHEIIPGWDLAPDKFTYSTVV 126
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
A D G +D A L++EM G+ + FN +L G A K++E M
Sbjct: 127 SALADAGRVDDAVALVHEMVADGV-VAAEAFNPVLRAMLRAGDVKGAAKLFEFMQLKGCV 185
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
P +YN + GL + + A+ ++ M + + P V T+ A++ G V G +++A W
Sbjct: 186 PTAATYNVLVHGLLVCGRAGAAMGVMRRMEREGVVPGVMTYGAVVDGLVRCGRVKDA--W 243
Query: 291 -----YNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
++G N+ ++ ++ C+ G++D A +
Sbjct: 244 KVAEEMERNGLARNEFVYSTVITGFCKSGEIDCALKV 280
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 106/255 (41%), Gaps = 37/255 (14%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMP 119
Y V L R + ++ E ++ E + +I + K+ + A KV++ M
Sbjct: 226 YGAVVDGLVRCGRVKDAWKVAEEMERNGLARNEFVYSTVITGFCKSGEIDCALKVWEAMV 285
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL 179
V+ ++A++G N K E + LF+++ P++++Y ++I+ + G
Sbjct: 286 ASPVRPNVVLYSAMIGGLANFGKMTEAELLFREMIDS-KCAPNIITYGSMIQGYFKIGDT 344
Query: 180 DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM------------ 227
A ++ EM G + ++++ L+ G + GR DA +W+ M++
Sbjct: 345 SRALSVWEEMIGAGCMPNAVSYSILINGLCNVGRLKDAMMVWKHMLDRGCAPDTIAYTSM 404
Query: 228 ------------------------NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
+ P+V SYN LDGL + K +A++L+ M +
Sbjct: 405 IKGLCVSGMVDGGLRLFYDMLASGHADPDVISYNVLLDGLLLAKDLPRAMDLLNRMLDQG 464
Query: 264 INPDVFTFYALIKGF 278
+PD T ++ F
Sbjct: 465 CDPDTVTCNIFLREF 479
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 80/177 (45%), Gaps = 4/177 (2%)
Query: 159 IEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAE 218
+ P++V Y+ +I + G + A L EM ++IT+ +++ G++ G + A
Sbjct: 289 VRPNVVLYSAMIGGLANFGKMTEAELLFREMIDSKCAPNIITYGSMIQGYFKIGDTSRAL 348
Query: 219 KIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGF 278
+WE M+ PN SY+ ++GL + K A+ + M + PD + ++IKG
Sbjct: 349 SVWEEMIGAGCMPNAVSYSILINGLCNVGRLKDAMMVWKHMLDRGCAPDTIAYTSMIKGL 408
Query: 279 VNEGNLEEAKRWYN---KSGCGMNKAI-FKLLVPFVCEKGDLDFAFNLCKRTFSERC 331
G ++ R + SG I + +L+ + DL A +L R + C
Sbjct: 409 CVSGMVDGGLRLFYDMLASGHADPDVISYNVLLDGLLLAKDLPRAMDLLNRMLDQGC 465
Score = 44.7 bits (104), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 8/110 (7%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDG---LFKDLPHKLGIEPDL 163
++A V+ M R C +++ +++ G CV+ VDG LF D+ +PD+
Sbjct: 379 LKDAMMVWKHMLDRGCAPDTIAYTSMIKGLCVSGM----VDGGLRLFYDMLASGHADPDV 434
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
+SYN ++ + L A LL M +G D +T N L F + R
Sbjct: 435 ISYNVLLDGLLLAKDLPRAMDLLNRMLDQGCDPDTVTCNIFLREFGAGER 484
>gi|255660908|gb|ACU25623.1| pentatricopeptide repeat-containing protein [Mulguraea
asparagoides]
Length = 481
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 140/320 (43%), Gaps = 34/320 (10%)
Query: 73 FRWIEE--ILEHQKQYK---------------------DISKEGFT------ARLIALYG 103
FRW+E + EH ++ D+ K+G +I YG
Sbjct: 32 FRWVERSNLFEHBRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYG 91
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K + + + K+F +M E+T+ S++AL + ++ F + + GIEP
Sbjct: 92 KQGIVQESVKLFQKMEELGVERTLKSYDALFKVILRRGRYMMAKRYFNKMLSE-GIEPTR 150
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
+N +I F G +++AN +M+ + I D++T+NT++ G+Y + +AEK +
Sbjct: 151 XXFNVLIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVE 210
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M N+ P V +Y + G Q AL L EM+ I P+ T+ L+ G N
Sbjct: 211 MKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLXEEMKGFGIKPNAITYSTLLPGLCNAEK 270
Query: 284 LEEA----KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQ 339
+ EA K +K + +IF L+ C G LD A ++ K +
Sbjct: 271 MSEARSILKEMVDKYLAPTDNSIFMRLITSQCTSGHLDAASDVLKAMIRLSVPTEAGHYG 330
Query: 340 LVVDRLAKELRVEEAKELVE 359
++++ K + ++A +L++
Sbjct: 331 VLIENFCKXGQYDQAVKLLD 350
Score = 45.1 bits (105), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 89/204 (43%), Gaps = 17/204 (8%)
Query: 37 LKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTA 96
LK +VDK+ +D I+ + + ++L+ + ++ G
Sbjct: 278 LKEMVDKYLAPTD-------NSIFMRLITSQCTSGHLDAASDVLKAMIRLSVPTEAGHYG 330
Query: 97 RLIALYGKAAMFENARKVFDEM--------PGRNCEQTVLSFNALLGACVNSKKFDEVDG 148
LI + K ++ A K+ D++ P ++N ++ N+ + + +
Sbjct: 331 VLIENFCKXGQYDQAVKLLDKLIEKDIILRPQSTLHLEPSAYNPMIEYLCNNGQAAKAET 390
Query: 149 LFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
L + L KLG++ D + NT+I+ +GS DSA LL M ++ + + +N+L+ +
Sbjct: 391 LVRQLL-KLGVQ-DPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYNSLVQSY 448
Query: 209 YSNGRFADAEKIWETMVNMNVRPN 232
ADA+ ++M+ + P+
Sbjct: 449 LKRNEPADAKAALDSMIENDHLPD 472
Score = 38.1 bits (87), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 88/234 (37%), Gaps = 13/234 (5%)
Query: 53 FRTNTGIYTGTVQRLANAKRFRWIEEIL-EHQKQYKDISKEGFTARLIALYGKAAMFENA 111
+ N Y+ + L NA++ IL E +Y + RLI + + A
Sbjct: 251 IKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYLAPTDNSIFMRLITSQCTSGHLDAA 310
Query: 112 RKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHK---------LGIEPD 162
V M + + L+ ++D+ L L K L +EP
Sbjct: 311 SDVLKAMIRLSVPTEAGHYGVLIENFCKXGQYDQAVKLLDKLIEKDIILRPQSTLHLEPS 370
Query: 163 LVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWE 222
+YN +I+ + G A TL+ ++ K G++ D NTL+ G G A ++ +
Sbjct: 371 --AYNPMIEYLCNNGQAAKAETLVRQLLKLGVQ-DPTALNTLIRGHSQEGSPDSAFELLK 427
Query: 223 TMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
M+ V +YN+ + + A + M + PD F ++++
Sbjct: 428 IMLRRKVDSEKSAYNSLVQSYLKRNEPADAKAALDSMIENDHLPDSALFRSVME 481
>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 592
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 156/339 (46%), Gaps = 9/339 (2%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
S+I G+ K + K + + D + N I+T V L ++++ Q
Sbjct: 254 SIIHGLCKFSEWKHVATLMNEMVD-SKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQ 312
Query: 86 YKDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
+ + + T L+ + + + A KVFD M + C V+S++ L+ ++ D
Sbjct: 313 -RGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRID 371
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
+ LF+++ + + P++V+YNT+I G L A L +EM G DL+T+ +
Sbjct: 372 KAMYLFEEMCQR-ELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYR-I 429
Query: 205 LLGFYSNGRFAD-AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
LL + R D A + + + N+ P+++SYN +DG+ + + A +L + SK
Sbjct: 430 LLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKG 489
Query: 264 INPDVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAF 320
++PDV+T+ +I G +G L EA + + N GC + + L+ + A
Sbjct: 490 LHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAI 549
Query: 321 NLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
L + D + + L+V+ L+ + + K+++
Sbjct: 550 QLLQEMLGRGFSADASTITLIVEMLSDDGLDQSVKQILH 588
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 152/336 (45%), Gaps = 7/336 (2%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++IRG+ E + + F K G F+ N Y + L R +L Q
Sbjct: 149 TLIRGLCVEGKIGEALHLFDKMVGEG-FQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQ 207
Query: 86 YKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
K+ T +I K A +F EM + V ++N+++ ++
Sbjct: 208 -KNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWK 266
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
V L ++ I P++V + T++ A +G + A+ ++ M ++G+ D++T+ L
Sbjct: 267 HVATLMNEMVDS-KIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTAL 325
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+ G +A+K+++TMV PNV SY+ ++G ++ KA+ L EM +E+
Sbjct: 326 MDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQREL 385
Query: 265 NPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFN 321
P++ T+ LI G + G L +A +++ SG + +++L+ ++C+ LD A
Sbjct: 386 VPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMA 445
Query: 322 LCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
+ K D +V+D + + +E A +L
Sbjct: 446 MLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDL 481
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 87/170 (51%), Gaps = 3/170 (1%)
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
KLG +PD ++ T+I+ +G + A L +M +G + + +T+ TL+ G G
Sbjct: 137 KLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSR 196
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
A ++ +MV N PNV +YN +D L ++Q +AL + EM +K I+P+V T+ ++I
Sbjct: 197 AAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSII 256
Query: 276 KGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
G + N+ S N IF LV +C++G + A ++
Sbjct: 257 HGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDV 306
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 112/256 (43%), Gaps = 4/256 (1%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
+ A F+ M +V+ F +L + N K + V L K + LGI D+ +
Sbjct: 55 IDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMD-SLGIPSDVYTLA 113
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
+I +F +D ++L ++ K G + D TF TL+ G G+ +A +++ MV
Sbjct: 114 IVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGE 173
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+PN +Y + GL ++ A+ L+ M K P+V T+ +I + + EA
Sbjct: 174 GFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEA 233
Query: 288 KRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDR 344
+++ G N + + ++ +C+ + L + + + +VD
Sbjct: 234 LNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDA 293
Query: 345 LAKELRVEEAKELVEL 360
L KE V A ++V++
Sbjct: 294 LCKEGMVTIAHDVVDV 309
>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 130/297 (43%), Gaps = 37/297 (12%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE------------ 145
LI+ K E A K+ D+M R+C +++NA++ + + DE
Sbjct: 349 LISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKG 408
Query: 146 -----------VDGLFKDLPHKL-----------GIEPDLVSYNTIIKAFVDKGSLDSAN 183
+ GL HK G PD +YN +I + L+ A
Sbjct: 409 ILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEAL 468
Query: 184 TLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
LL EME G +++ +NTL+ GF N R +AE+I++ M V + +YN +DGL
Sbjct: 469 NLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGL 528
Query: 244 AIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK---RWYNKSGCGMNK 300
K+ + A +L+ +M + + PD FT+ +L+ F G++++A + SGC +
Sbjct: 529 CKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDI 588
Query: 301 AIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
+ L+ +C+ G + A L + + ++ V+ L K R EA L
Sbjct: 589 VTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRL 645
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 146/355 (41%), Gaps = 40/355 (11%)
Query: 44 FKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYG 103
F +S F ++ +Y +++L A F ++ +LE K G + YG
Sbjct: 84 FNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVLEEMKLSGCEFDRGIFLIFVESYG 143
Query: 104 KAAMFENARKVF----DE--------------------------------MPGRNCEQTV 127
K +++ + DE M R V
Sbjct: 144 KFELYDEVVGIVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDV 203
Query: 128 LSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLY 187
+FN L+ A + + + +++P G+ PD ++ TI++ +++ G+LD A +
Sbjct: 204 STFNILIKALCKAHQVRPAILMMEEMP-SYGLSPDETTFTTIMQGYIEGGNLDGALRIKE 262
Query: 188 EMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEK 247
+M + G +T N L+ GF GR A + V+ RP+ +YN ++GL
Sbjct: 263 QMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIG 322
Query: 248 QTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFK 304
K A+E+V M ++PD++T+ +LI G G +EEA + ++ C N +
Sbjct: 323 HAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYN 382
Query: 305 LLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
++ +C++ +D A + + S+ L D ++ L + A +L E
Sbjct: 383 AIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFE 437
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 117/259 (45%), Gaps = 6/259 (2%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
S+I+G+ +N K +D F++ G R + Y + L ++++ +L+ +
Sbjct: 418 SLIQGLCLSSNHKSAMDLFEEMKGKG-CRPDEFTYNMLIDSLCSSRKLEEALNLLKEMEL 476
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
LI + K E A ++FDEM + + +++N L+ SK+ ++
Sbjct: 477 NGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVED 536
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
L + + G+ PD +YN+++ F G + A ++ M G D++T+ TL+
Sbjct: 537 AAQLMDQMIME-GLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLI 595
Query: 206 LGFYSNGRFADAEKIWET--MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
G GR A ++ + M M + P+ +YN + L +T +A+ L EM K
Sbjct: 596 SGLCKAGRVQVASRLLRSIQMKGMVLTPH--AYNPVIQALFKRNRTHEAMRLFREMLDKS 653
Query: 264 INPDVFTFYALIKGFVNEG 282
PD T+ + +G N G
Sbjct: 654 EPPDAITYKIVYRGLCNGG 672
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 120/273 (43%), Gaps = 16/273 (5%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGI------YTGTVQRLANAKRFRWIEEI 79
++I + KEN + +++++ R T+ GI + +Q L + + ++
Sbjct: 383 AIISSLCKEN-------RVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDL 435
Query: 80 LEHQKQYKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACV 138
E K K + FT LI + E A + EM C + V+ +N L+
Sbjct: 436 FEEMKG-KGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFC 494
Query: 139 NSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL 198
+K+ +E + +F ++ + G+ D V+YNT+I ++ A L+ +M +G+R D
Sbjct: 495 KNKRIEEAEEIFDEMELQ-GVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDK 553
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
T+N+LL F G A I +TM + P++ +Y + GL + + A L+
Sbjct: 554 FTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRS 613
Query: 259 MRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY 291
++ K + + +I+ EA R +
Sbjct: 614 IQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLF 646
>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
Length = 500
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 162/371 (43%), Gaps = 43/371 (11%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
V++G + NN+++ + ++ + G ++ + Y + LA + +IL
Sbjct: 51 VMQGFARSNNMEKAREVYQHMVESG-YKPDNVSYHILIHGLAKIGKLDESLKILSEMVMR 109
Query: 87 KDISKEGFTARLIALYGKAAMFENARKVFDEM-PGRNCEQTVLSFNALLGACVNSKKFDE 145
+ L+ KA ++A +FDEM G + ++ + +LG C + K +
Sbjct: 110 GQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLC-QAGKVKD 168
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
FK +P K G +P++ YN ++ G L+ ANTL EM+ D++T+NTLL
Sbjct: 169 ASERFKQMP-KHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLL 227
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM------ 259
R + K++E M PNV +++ + GL + +KALE+ G M
Sbjct: 228 DAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCK 287
Query: 260 --------------------RSKE---------INPDVFTFYALIKGFVNEGNLEEAKRW 290
+++E I PD + +LI G+ G+++EA++
Sbjct: 288 PNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKL 347
Query: 291 YNK--SGCGMNKAI--FKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLA 346
Y + G G+ I F L+ C+ G L A L ++ D ++++ L+
Sbjct: 348 YREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLS 407
Query: 347 KELRVEEAKEL 357
+ +++EA E+
Sbjct: 408 RATKLDEALEV 418
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 119/252 (47%), Gaps = 4/252 (1%)
Query: 118 MPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKG 177
M +N V ++++++ + V K +E + +++ G PD+ ++N +++ F
Sbjct: 1 MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEM-MAAGCNPDVFAFNGVMQGFARSN 59
Query: 178 SLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYN 237
+++ A + M + G + D ++++ L+ G G+ ++ KI MV P++++Y+
Sbjct: 60 NMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYS 119
Query: 238 ARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KS 294
+ + LA ++ A L EM +PD FY LI G G +++A + K
Sbjct: 120 SLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKH 179
Query: 295 GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA 354
GC N ++ +L+ +C G L+ A L S C D ++D + K RVEE
Sbjct: 180 GCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEG 239
Query: 355 KELVELGKTNSY 366
+L E + Y
Sbjct: 240 CKLFEAMRAAGY 251
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 128/312 (41%), Gaps = 40/312 (12%)
Query: 87 KDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
K+I+ FT + +I K A E + KV +EM C V +FN ++ S ++
Sbjct: 4 KNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEK 63
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL-------------------------- 179
+++ + G +PD VSY+ +I G L
Sbjct: 64 AREVYQHMVES-GYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLV 122
Query: 180 ---------DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
D A++L EM + G D + F L+LG G+ DA + ++ M +
Sbjct: 123 RALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQ 182
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
PNV YN L GL Q ++A L EM+S +PDV T+ L+ +EE +
Sbjct: 183 PNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKL 242
Query: 291 YN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAK 347
+ +G N F L+ +C G+L+ A + C ++ ++ L +
Sbjct: 243 FEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCR 302
Query: 348 ELRVEEAKELVE 359
+V +A+EL E
Sbjct: 303 AEKVIQARELFE 314
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 145/329 (44%), Gaps = 54/329 (16%)
Query: 84 KQYKDISKEGFTARL----IALYG--KAAMFENARKVFDEMPGRNCEQTVLSFNALLGAC 137
+++K + K G + + L+G + E A +F EM +C V+++N LL A
Sbjct: 171 ERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAV 230
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLD----------------- 180
+++ +E LF+ + G P++++++T+I G L+
Sbjct: 231 CKARRVEEGCKLFEAM-RAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPN 289
Query: 181 ------------------SANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWE 222
A L +M + I D + +N+L+ G+ G +AEK++
Sbjct: 290 KYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYR 349
Query: 223 TMVN-MNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
M ++P + ++N +DG + +A ELV EM +K + D T+ LI G
Sbjct: 350 EMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRA 409
Query: 282 GNLEEAKRWYNKSGCGMNKAIFKL----LVPFV---CEKGDLDFAFNLCKRTFSERCLVD 334
L+EA Y + M + F L V FV C+ G++D A+ + + T + +
Sbjct: 410 TKLDEALEVYKQ----MREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPN 465
Query: 335 QAPLQLVVDRLAKELRVEEAKELVELGKT 363
+++ + L K RVE+A++L+E K
Sbjct: 466 PETFRILSESLIKLGRVEDAQKLMEPAKA 494
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 123/257 (47%), Gaps = 4/257 (1%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K + A +++ E+ + V + N ++ A ++K + D+ K G+ PD+
Sbjct: 335 KVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEK-GVFPDV 393
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
V+YNT+I A+ +G L+ A L+ M KG++ + T+N ++ G G++ A+ + +
Sbjct: 394 VTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDE 453
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M+ + + P+ +YN L A + EM S+ + PD+ +F ALI G
Sbjct: 454 MLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGC 513
Query: 284 LEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL 340
L++A +++ +G + I+ +L+ C G + A + + C +D
Sbjct: 514 LDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNT 573
Query: 341 VVDRLAKELRVEEAKEL 357
+++ L KE + EA EL
Sbjct: 574 ILNGLCKEKMLSEADEL 590
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 94/184 (51%), Gaps = 1/184 (0%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K + A+ V DEM ++N LL C + + + +F ++P + G+ PDL
Sbjct: 440 KTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQ-GVVPDL 498
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
VS++ +I G LD A +M+ G+ D + + L+ GF NG ++A K+ +
Sbjct: 499 VSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDE 558
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M+ +V +YN L+GL EK +A EL EM + + PD +TF LI G+ +GN
Sbjct: 559 MLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGN 618
Query: 284 LEEA 287
+ +A
Sbjct: 619 MNKA 622
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 105/219 (47%), Gaps = 36/219 (16%)
Query: 110 NARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPD------- 162
+A ++FDEMP + ++SF+AL+G + D+ F+D+ + G+ PD
Sbjct: 481 DAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNA-GLAPDNVIYTIL 539
Query: 163 ----------------------------LVSYNTIIKAFVDKGSLDSANTLLYEMEKKGI 194
+V+YNTI+ + L A+ L EM ++G+
Sbjct: 540 IGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGV 599
Query: 195 RLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALE 254
D TF TL+ G+ +G A ++E M+ N++P+V +YN +DG + +K E
Sbjct: 600 FPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNE 659
Query: 255 LVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK 293
L +M S+ I P+ ++ LI G+ N G + EA R +++
Sbjct: 660 LWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDE 698
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 87/170 (51%), Gaps = 1/170 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI Y A +++DEM + E T+++ N ++ + + D ++ K
Sbjct: 679 LINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLK- 737
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
GI PD ++YNT+I F+ + ++D A L+ +ME G+ D+IT+N +L GF GR +A
Sbjct: 738 GIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEA 797
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPD 267
E I M+ V P+ +Y + ++G + K+A + EM + PD
Sbjct: 798 ELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 847
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 101/196 (51%), Gaps = 1/196 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K + E +++++M R +S+ L+ N E L+ ++ K
Sbjct: 644 LIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEK- 702
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G E +++ NTI+K + G+ A+ L M KGI D IT+NTL+ GF A
Sbjct: 703 GFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRA 762
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ M N + P+V +YN L+G + + + ++A ++ +M + +NPD T+ +LI G
Sbjct: 763 FALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLING 822
Query: 278 FVNEGNLEEAKRWYNK 293
V + NL+EA R +++
Sbjct: 823 HVTQNNLKEAFRVHDE 838
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/312 (21%), Positives = 130/312 (41%), Gaps = 34/312 (10%)
Query: 38 KRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTAR 97
+R +D +S+ F+ + ++ + L ++R + ++ + +S+
Sbjct: 219 QRFIDSI--TSNCPNFKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVES 276
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+ YG NC L F+ L+ V ++K E F+ L K
Sbjct: 277 LVLTYG------------------NCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSK- 317
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ + + N+++ V G +D A + E+ + G+++++ T N ++ N + +
Sbjct: 318 GLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENT 377
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ M V P+V +YN ++ + ++A EL+ M K + P VFT+ A+I G
Sbjct: 378 KSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIING 437
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
G AK + K G + A + +L+ C ++ A +R F D
Sbjct: 438 LCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDA----ERIF------D 487
Query: 335 QAPLQLVVDRLA 346
+ P Q VV L
Sbjct: 488 EMPSQGVVPDLV 499
>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 511
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 158/341 (46%), Gaps = 13/341 (3%)
Query: 25 GSVIRGIYKENNLK---RLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILE 81
G++I G+ K K RL+ K + S + + +Y + L K ++
Sbjct: 166 GTLINGLCKTGETKAVARLLRKLEGHS----VKPDVVMYNTIINSLCKNKLLGDACDVYS 221
Query: 82 HQKQYKDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNS 140
+ K IS + T LI + + A + +EM +N V +FN L+ A
Sbjct: 222 -EMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKE 280
Query: 141 KKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLIT 200
K E L + K I+PD+ +YN++I + + A + Y M ++G+ D+
Sbjct: 281 GKMKEAKILLAVM-MKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQC 339
Query: 201 FNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMR 260
+ ++ G +A ++E M + N+ P++ +YN+ +DGL ++A+ L M+
Sbjct: 340 YTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMK 399
Query: 261 SKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLD 317
+ I PDV+++ L+ G G LE+AK + + G +N + +L+ +C+ G D
Sbjct: 400 EQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFD 459
Query: 318 FAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
A +L + + C+ D +++ L ++ ++A++++
Sbjct: 460 EALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKIL 500
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 124/250 (49%), Gaps = 4/250 (1%)
Query: 113 KVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKA 172
++ ++ G + + V+ +N ++ + +K + ++ ++ K GI PD+V+Y T+I
Sbjct: 183 RLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVK-GISPDVVTYTTLIHG 241
Query: 173 FVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPN 232
F G L A +LL EM+ K I ++ TFN L+ G+ +A+ + M+ ++P+
Sbjct: 242 FCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPD 301
Query: 233 VRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN 292
V +YN+ +DG + + K A + M + + PDV + +I G ++EA +
Sbjct: 302 VFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFE 361
Query: 293 K---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKEL 349
+ + + L+ +C+ L+ A LCKR + D +++D L K
Sbjct: 362 EMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSG 421
Query: 350 RVEEAKELVE 359
R+E+AKE+ +
Sbjct: 422 RLEDAKEIFQ 431
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 105/234 (44%), Gaps = 4/234 (1%)
Query: 130 FNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEM 189
FN +L + VN+K + V LFK GI PDL + + +I F + + A ++ +
Sbjct: 60 FNNILSSLVNNKHYPTVISLFKQFEPN-GITPDLCTLSILINCFCHQAHITLAFSVFANI 118
Query: 190 EKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQT 249
K+G + IT NTL+ G G A + +V + + SY ++GL +T
Sbjct: 119 LKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGET 178
Query: 250 KKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLL 306
K L+ ++ + PDV + +I L +A Y++ G + + L
Sbjct: 179 KAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTL 238
Query: 307 VPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVEL 360
+ C G L AF+L + + +++D L+KE +++EAK L+ +
Sbjct: 239 IHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAV 292
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/196 (19%), Positives = 88/196 (44%), Gaps = 7/196 (3%)
Query: 73 FRWIEEILEHQKQYKDISKEGFT------ARLIALYGKAAMFENARKVFDEMPGRNCEQT 126
+ ++E+ + + +++ G T +I K M + A +F+EM +N
Sbjct: 312 YFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPD 371
Query: 127 VLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLL 186
++++N+L+ + + L K + + GI+PD+ SY ++ G L+ A +
Sbjct: 372 IVTYNSLIDGLCKNHHLERAIALCKRMKEQ-GIQPDVYSYTILLDGLCKSGRLEDAKEIF 430
Query: 187 YEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIE 246
+ KG L++ + L+ G F +A + M + P+ +++ + L +
Sbjct: 431 QRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEK 490
Query: 247 KQTKKALELVGEMRSK 262
+ KA +++ EM ++
Sbjct: 491 DENDKAEKILREMIAR 506
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 53/133 (39%)
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
P +N I+ + V+ + +L + E GI DL T + L+ F A +
Sbjct: 55 PPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSV 114
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
+ ++ PN + N + GL + KKAL ++ ++ D ++ LI G
Sbjct: 115 FANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCK 174
Query: 281 EGNLEEAKRWYNK 293
G + R K
Sbjct: 175 TGETKAVARLLRK 187
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 62/166 (37%), Gaps = 1/166 (0%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMP 119
YT + L K + E K I LI K E A + M
Sbjct: 340 YTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMK 399
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL 179
+ + V S+ LL S + ++ +F+ L K G ++ +Y +I G
Sbjct: 400 EQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAK-GYHLNVHAYTVLINRLCKAGFF 458
Query: 180 DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMV 225
D A L +ME KG D +TF+ ++ + AEKI M+
Sbjct: 459 DEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREMI 504
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 120/265 (45%), Gaps = 3/265 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI +A A ++ EMP Q V+ N ++ +++K D LFK++
Sbjct: 883 LIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESG 942
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
PD+ +Y+TI+ + V G +D A L+ +M KG +++T+++LL G G+ +A
Sbjct: 943 SCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEA 1002
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ + M PN+ +YN +DG + +A L+ EM P+V T+ L+
Sbjct: 1003 TALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDA 1062
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
F G E+A + G N + L+ C+K +++ A L + C+ +
Sbjct: 1063 FCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPN 1122
Query: 335 QAPLQLVVDRLAKELRVEEAKELVE 359
V+ L K +V E L+E
Sbjct: 1123 VVSYNTVIAGLCKATKVHEGVLLLE 1147
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 119/261 (45%), Gaps = 4/261 (1%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
E A +V M C ++++ ++ + K E L + + + G PD+ +
Sbjct: 386 MERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRR-GCRPDVACLS 444
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
T+I A ++DSA LL D++ ++ L+ R +AE + MV
Sbjct: 445 TLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKN 504
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
P+V +YN+ +DGL ++ A L MR+ + PDV T+ +I F + NL+ A
Sbjct: 505 RCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSA 564
Query: 288 KRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDR 344
+ + + C + + L+ +C+ G +D AF++ + C + ++D
Sbjct: 565 FKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDG 624
Query: 345 LAKELRVEEAKELVELGKTNS 365
L K +VE+A E++E+ + S
Sbjct: 625 LCKINKVEQAAEMLEIMRKQS 645
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/371 (22%), Positives = 159/371 (42%), Gaps = 42/371 (11%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
+I G+ + ++ + K+ G N ++ ++ L +A++ E+ + ++
Sbjct: 883 LIHGLCRAGDIGTAYELLKEMPRHG-VPQNVILHNVVIKGLCSARKLDSALELFKEMEES 941
Query: 87 KDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
+ FT + ++ K+ ++A ++ ++M + C V+++++LL + K DE
Sbjct: 942 GSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDE 1001
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
L + + G P++V+YNTII G +D A LL EM G + +++T+ LL
Sbjct: 1002 ATALLQRMTRS-GCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLL 1060
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG-------- 257
F G+ DA + E MV PN+ +YN+ LD + + ++A +L+
Sbjct: 1061 DAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCV 1120
Query: 258 ---------------------------EMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
+M S PD+ TF +I ++ A
Sbjct: 1121 PNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYEL 1180
Query: 291 YN---KSGCGMNKAIFKLLVPFVCEKGDLDFA-FNLCKRTFSERCLVDQAPLQLVVDRLA 346
+N +SGC N + LV +C+ D A + L + T + C D V+D L
Sbjct: 1181 FNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLC 1240
Query: 347 KELRVEEAKEL 357
K RV+ A +L
Sbjct: 1241 KSKRVDRAYKL 1251
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 121/275 (44%), Gaps = 4/275 (1%)
Query: 17 TATGPKFI--GSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFR 74
T P I ++I G K L+ D ++ G R + + + L A
Sbjct: 399 TGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRG-CRPDVACLSTLIDALCKAAAID 457
Query: 75 WIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL 134
+E+L + LI KA A D M C V+++N+++
Sbjct: 458 SAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVV 517
Query: 135 GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGI 194
S++ ++ LF D G+ PD+V+Y+ +I +F +LDSA +L M++
Sbjct: 518 DGLCKSRRINDAFLLF-DRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKC 576
Query: 195 RLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALE 254
D++T++ L+ G G A +++ M+ PN+ +YN +DGL + ++A E
Sbjct: 577 VPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAE 636
Query: 255 LVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
++ MR + PD T+ LI G N LEEA R
Sbjct: 637 MLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWR 671
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 142/333 (42%), Gaps = 5/333 (1%)
Query: 25 GSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQK 84
G+++ G + +L V+ +K ++ G +R N Y + ++L+
Sbjct: 339 GTLVDGFCRVGDLDGAVELVRKMTERG-YRPNAITYNNIMHVFCRRNDMERAHQVLQMMI 397
Query: 85 QYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
Q + +I+ + KA A + ++M R C V + L+ A + D
Sbjct: 398 QTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAID 457
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
L + + + PD+V+Y+ +I A L A + L M K D++T+N++
Sbjct: 458 SAQELLR-MSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSV 516
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+ G + R DA +++ M V P+V +Y+ + + A +++ M+ +
Sbjct: 517 VDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKC 576
Query: 265 NPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFN 321
PDV T+ ALI G G +++A + + GC N + L+ +C+ ++ A
Sbjct: 577 VPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAE 636
Query: 322 LCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA 354
+ + + C D +++ L R+EEA
Sbjct: 637 MLEIMRKQSCTPDSITYTCLINGLCNASRLEEA 669
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 145/340 (42%), Gaps = 11/340 (3%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFR---WIEEILEH 82
++I G+ K + L + ++ D G F N Y + A R W+ E +
Sbjct: 235 TMINGLSKSDRLDDAIRLLEEMVDNG-FAPNVFSYNTVLHGFCKANRVENALWLLEQMVT 293
Query: 83 QKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKK 142
+ D+ +T + L K + A +V D+M R C+ V+++ L+
Sbjct: 294 RGCPPDVVS--YTTVINGLC-KLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGD 350
Query: 143 FDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFN 202
D L + + + G P+ ++YN I+ F + ++ A+ +L M + G D I ++
Sbjct: 351 LDGAVELVRKMTER-GYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYS 409
Query: 203 TLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
T++ GF G+ +A + E M+ RP+V + +D L A EL+
Sbjct: 410 TIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGM 469
Query: 263 EINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFA 319
+ PDV + LI L EA+ W + K+ C + + +V +C+ ++ A
Sbjct: 470 DCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDA 529
Query: 320 FNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
F L R + + D +V+ K+ ++ A +++E
Sbjct: 530 FLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLE 569
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 128/273 (46%), Gaps = 5/273 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I + K + A + +EM C+ V+++ LL A K ++ GL + + K
Sbjct: 1024 IIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEK- 1082
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G P+L +YN+++ F K ++ A LL M +KG +++++NT++ G + +
Sbjct: 1083 GYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEG 1142
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ E M++ N P++ ++N +D + + A EL ++ P++ T+ +L+ G
Sbjct: 1143 VLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHG 1202
Query: 278 FVNEGNLEEA----KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV 333
++A + K GC + + ++ +C+ +D A+ L + S+
Sbjct: 1203 LCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAP 1262
Query: 334 DQAPLQLVVDRLAKELRVEEAKELVELGKTNSY 366
D +V+ L K ++EA ++EL N +
Sbjct: 1263 DDVTYSIVISSLCKWRFMDEANNVLELMLKNGF 1295
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 120/267 (44%), Gaps = 5/267 (1%)
Query: 96 ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPH 155
+ LI+ + +A A ++FDEM + + ++L ++ + + F+++
Sbjct: 165 STLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSK 224
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
PD V+YNT+I LD A LL EM G ++ ++NT+L GF R
Sbjct: 225 T--CPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVE 282
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
+A + E MV P+V SY ++GL Q +A ++ +M + P+V T+ L+
Sbjct: 283 NALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLV 342
Query: 276 KGFVNEGNLE---EAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCL 332
GF G+L+ E R + G N + ++ C + D++ A + + C
Sbjct: 343 DGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCP 402
Query: 333 VDQAPLQLVVDRLAKELRVEEAKELVE 359
D ++ K ++ EA +L+E
Sbjct: 403 PDAINYSTIISGFCKAGKLREAHDLLE 429
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 117/260 (45%), Gaps = 10/260 (3%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A ++F+ + C ++++N+L+ S++FD+ + L +++ K G PD+++YNT+I
Sbjct: 1177 AYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVI 1236
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD-AEKIWETMVNMNV 229
+D A L +M G+ D +T+ ++++ RF D A + E M+
Sbjct: 1237 DGLCKSKRVDRAYKLFLQMLSDGLAPDDVTY-SIVISSLCKWRFMDEANNVLELMLKNGF 1295
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
P +Y +DG KALE++ + SK PDV TF I G L +A
Sbjct: 1296 DPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGE 1355
Query: 290 WYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLA 346
++G + + L+ C+ + A +L + C D A +V L
Sbjct: 1356 LLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLV 1415
Query: 347 -----KELRVEEAKELVELG 361
K+L E +K +V+ G
Sbjct: 1416 DKKSYKDLLAEVSKSMVDTG 1435
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 106/245 (43%), Gaps = 41/245 (16%)
Query: 124 EQTVLSFNALLGACVNSKKFDEVDGLFKD-LPHKLGIEPDLVSYNTIIKAFVDKGSLDSA 182
+ + N LL V + ++ + LF+ + + G D V+Y+T+I F+ G + A
Sbjct: 123 QHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWG--GDTVTYSTLISGFIRAGKILPA 180
Query: 183 NTLLYEMEKKGIRL----------------------------------DLITFNTLLLGF 208
L EM +KG++ D +T+NT++ G
Sbjct: 181 YELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCPPDSVTYNTMINGL 240
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDV 268
+ R DA ++ E MV+ PNV SYN L G + + AL L+ +M ++ PDV
Sbjct: 241 SKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDV 300
Query: 269 FTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKR 325
++ +I G ++EA R +K GC N + LV C GDLD A L R
Sbjct: 301 VSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVEL-VR 359
Query: 326 TFSER 330
+ER
Sbjct: 360 KMTER 364
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 145/321 (45%), Gaps = 27/321 (8%)
Query: 58 GIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIA-LYGKAAMF----ENAR 112
G + + R+ N+ RF W +Y + + E FT +L + GK + A
Sbjct: 779 GGFHHKIVRILNS-RFAW---------EYAETALERFTGKLTTTVVGKVLQGVRNGDAAL 828
Query: 113 KVFD---EMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTI 169
FD G N + N LL A + K+ + ++++ KL P++ ++ +
Sbjct: 829 GFFDWATSQEGYN--HDTYTCNCLLQALLRLKRPKDALQVYRN---KLCCSPNMFTFTIL 883
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMV-NMN 228
I G + +A LL EM + G+ ++I N ++ G S + A ++++ M + +
Sbjct: 884 IHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGS 943
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
P+V +Y+ +D L + A LV +M SK +P+V T+ +L+ G G L+EA
Sbjct: 944 CPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEAT 1003
Query: 289 ---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRL 345
+ +SGC N + ++ C+ G +D A++L + C + +++D
Sbjct: 1004 ALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAF 1063
Query: 346 AKELRVEEAKELVELGKTNSY 366
K + E+A LVE+ Y
Sbjct: 1064 CKCGKAEDAIGLVEVMVEKGY 1084
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 76/166 (45%), Gaps = 1/166 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I + K ++A K+ + M C V++++AL+ + D+ +F+++
Sbjct: 551 VIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEM-LGC 609
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G P+LV+YNT+I ++ A +L M K+ D IT+ L+ G + R +A
Sbjct: 610 GCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEA 669
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
++ M + P+ +Y L L + +L+ EM + E
Sbjct: 670 WRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEMEATE 715
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 89/178 (50%), Gaps = 15/178 (8%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
++ ++GK ++ARKVF+ M RN V+ ++A+LG V K+ ++ GL++ + +
Sbjct: 1462 IVDMFGKCGSPQDARKVFEGMDQRN----VVLWSAMLGVYVFHKQEEQAFGLWRVMGLE- 1516
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKK-GIRLDLITFNTLLLGFYSNGRFAD 216
G+EPD V++ +++ G LD+A + + G+ + F+ ++ G +
Sbjct: 1517 GVEPDAVTFLSLLTMCCHAGLLDAAVDEFVSISRDYGLEPGVDHFSCVIDLLGRLGLVNE 1576
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYAL 274
AE + M+ M +P+ ++N L I ++AL R E+NP ++ L
Sbjct: 1577 AEDL---MLGMPCKPSAATWNCLLSAYKICGDFERAL------RVAELNPTQASYLLL 1625
Score = 45.1 bits (105), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 108/268 (40%), Gaps = 34/268 (12%)
Query: 25 GSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQK 84
G++I G K NL + ++ + G + + ++ + L+ R R E+LE
Sbjct: 1303 GTLIDGFCKTGNLDKALEILQLLLSKGSY-PDVVTFSIFIDWLSKRGRLRQAGELLETML 1361
Query: 85 QYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
+ + L+ + A++ E+A +F+ M CE ++ L+G V+ K
Sbjct: 1362 RAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKS-- 1419
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKK-----GIRLDLI 199
+KDL A V K +D+ L +E+ K + D+
Sbjct: 1420 -----YKDL-----------------LAEVSKSMVDTGFKLNHELSSKLEASIEVEADVR 1457
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
++ F G DA K++E M + NV ++A L KQ ++A L M
Sbjct: 1458 LGCAIVDMFGKCGSPQDARKVFEGM----DQRNVVLWSAMLGVYVFHKQEEQAFGLWRVM 1513
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLEEA 287
+ + PD TF +L+ + G L+ A
Sbjct: 1514 GLEGVEPDAVTFLSLLTMCCHAGLLDAA 1541
>gi|356561685|ref|XP_003549110.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 477
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 134/269 (49%), Gaps = 13/269 (4%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
KA + ++ ++ G + + V+ + ++ +K+ + L+ ++ K GI P++
Sbjct: 210 KAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVK-GISPNV 268
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
+YNT+I F G+L A +LL EM+ K I D+ TFN L+ G+ +A ++E
Sbjct: 269 FTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEE 328
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M + N+ PN+ +Y + +DGL ++A+ L +M+ + I PDV+++ L+ G
Sbjct: 329 MKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGR 388
Query: 284 LEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL 340
LE AK+++ G +N + +++ +C+ G +L + + C+ D +
Sbjct: 389 LENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPDAITFKT 448
Query: 341 VV---------DRLAKELRVEEAKELVEL 360
++ D+ K LR A+ L+E+
Sbjct: 449 IICALFEKDENDKAEKFLREMIARGLLEV 477
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 123/284 (43%), Gaps = 12/284 (4%)
Query: 86 YKDISKEGFTARLIAL------YGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACV 138
+K G T L L + A A VF + R ++ N L+ G C
Sbjct: 116 FKQFQSNGVTPNLCTLNILINCFCHLAHITFAFSVFANILKRGYHPDAITLNTLIKGLCF 175
Query: 139 NSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL 198
+ + F D G + D VSY T+I G + LL ++E ++ D+
Sbjct: 176 CGEIKRAL--YFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDV 233
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
+ + T++ N R DA ++ M+ + PNV +YN + G I K+A L+ E
Sbjct: 234 VMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNE 293
Query: 259 MRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGD 315
M+ K INPDV+TF LI EG ++EA + + N + L+ +C+
Sbjct: 294 MKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHH 353
Query: 316 LDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
L+ A LCK+ + D +++D L K R+E AK+ +
Sbjct: 354 LERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKQFFQ 397
Score = 38.5 bits (88), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 30/160 (18%), Positives = 64/160 (40%), Gaps = 3/160 (1%)
Query: 201 FNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMR 260
F+ +L N + +++ + V PN+ + N ++ A + +
Sbjct: 96 FDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILINCFCHLAHITFAFSVFANIL 155
Query: 261 SKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLD 317
+ +PD T LIKG G ++ A +++K G +++ + L+ +C+ G+
Sbjct: 156 KRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLCKAGETK 215
Query: 318 FAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
L ++ D ++ L K RV +A +L
Sbjct: 216 AVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDL 255
>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
Length = 724
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 135/312 (43%), Gaps = 17/312 (5%)
Query: 73 FRWIEEILEHQKQYKDISKEGFTAR------LIALYGKAAMFENARKVFDEMPGRNCEQT 126
F + +LE K + +GFT L+ K + A+ + ++PG N
Sbjct: 290 FCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPGPN---- 345
Query: 127 VLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLL 186
V+ FN L+ V + + +E D G PD+ +++T++ KG SA L+
Sbjct: 346 VVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELV 405
Query: 187 YEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIE 246
+M+ KG + +L T+ L+ GF G+ +A I M+ N YNA + L
Sbjct: 406 NDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKH 465
Query: 247 KQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIF 303
+ +AL++ GEM SK PD+FTF +LI G +E+A Y G N F
Sbjct: 466 GKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTF 525
Query: 304 KLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA----KELVE 359
L+ +G++ A L C +D+ ++ L K VE+ +E++
Sbjct: 526 NTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIR 585
Query: 360 LGKTNSYCRYNL 371
G T S N+
Sbjct: 586 KGLTPSIITCNI 597
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 132/281 (46%), Gaps = 13/281 (4%)
Query: 93 GFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKD 152
G+ A LI+ K A +F EM + C+ + +FN+L+ + ++ L++D
Sbjct: 454 GYNA-LISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRD 512
Query: 153 LPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNG 212
+ + G+ + V++NT+I AF+ +G + A L+ +M +G LD IT+N L+ G
Sbjct: 513 MVLE-GVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTG 571
Query: 213 RFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFY 272
++E M+ + P++ + N ++G + ALE + +M + +PD+ T+
Sbjct: 572 AVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYN 631
Query: 273 ALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSE 329
+LI G G ++EA + K G + + L+ ++C +G D A L R
Sbjct: 632 SLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVEN 691
Query: 330 RCLVDQAPLQLVVDRLAKELRVEEAKELVELGKTNSYCRYN 370
+ + ++V K+ E G+T +Y +++
Sbjct: 692 GFVPNDVTWNILVYNFGKQSNSE--------GQTITYAQFS 724
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 139/332 (41%), Gaps = 37/332 (11%)
Query: 59 IYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEM 118
+Y + +L A F+ I+ +L K+ + +E ++ YG+A + A ++ +M
Sbjct: 106 VYYLLIDKLGAAAGFKVIDRLLLQMKEEGIVFRESLFILIMKYYGRAGLPGQATRLLLDM 165
Query: 119 PG-RNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKG 177
G CE + S+N +L V +F D+ K G+ P+ ++ ++KA
Sbjct: 166 KGVYCCEPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSK-GVSPNDYTFGLVMKALCMVN 224
Query: 178 SLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYN 237
+D+A LL +M K G + + + TL+ R +A K+ E M M P+V ++N
Sbjct: 225 EVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFN 284
Query: 238 ARLDGLAIEKQTKKALELVGEM-------------------------------RSKEINP 266
+ G + + +LV M SK P
Sbjct: 285 TVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPGP 344
Query: 267 DVFTFYALIKGFVNEGNLEEAKRW-YNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
+V F L+ GFV G L EA + Y+K +G + F LV +C+KG A L
Sbjct: 345 NVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALEL 404
Query: 323 CKRTFSERCLVDQAPLQLVVDRLAKELRVEEA 354
++ C + +++D K+ ++EEA
Sbjct: 405 VNDMDAKGCKPNLNTYTILIDGFCKKGQLEEA 436
>gi|255660948|gb|ACU25643.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
Length = 484
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 129/285 (45%), Gaps = 34/285 (11%)
Query: 73 FRWIEE--ILEHQKQYK---------------------DISKEGFT------ARLIALYG 103
FRW+E + EH ++ D+ K+G +I YG
Sbjct: 32 FRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDLWVLMIDSYG 91
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
KA + + + K+F +M E+T+ S++AL + ++ F + + GIEP
Sbjct: 92 KAGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRGRYMMAKRYFNKMLSE-GIEPTR 150
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
++N +I F G +D+AN M+ + I D+IT+NT++ G+Y + + E +
Sbjct: 151 HTFNFMIWGFFLSGKVDTANRFFEXMKSREIMPDVITYNTMINGYYRVKKMEEXENYFME 210
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M N+ P V +Y + G + AL LV EM+ INP+ T+ L+ G N
Sbjct: 211 MKGRNIEPTVVTYTTLIKGYVSVDRIDDALRLVEEMKGFGINPNAITYSTLLPGLCNAEK 270
Query: 284 LEEA----KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCK 324
+ EA K +K + +IF L+ C+ G+LD A ++ K
Sbjct: 271 MSEAQSILKEMVDKYIAPKDNSIFLRLISGQCKVGNLDAAADVLK 315
Score = 44.7 bits (104), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 86/199 (43%), Gaps = 11/199 (5%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI Y ++A ++ +EM G ++++ LL N++K E + K++ K
Sbjct: 226 LIKGYVSVDRIDDALRLVEEMKGFGINPNAITYSTLLPGLCNAEKMSEAQSILKEMVDKY 285
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
D + +I G+LD+A +L M + + + + L+ G++ A
Sbjct: 286 IAPKDNSIFLRLISGQCKVGNLDAAADVLKVMIRLSVPTEAGHYGVLIENCCKAGQYDRA 345
Query: 218 EKIWETMVNMNV--RPNV------RSYNARLDGLAIEKQTKKALELVGE-MRSKEINPDV 268
K + ++ ++ RP +YN ++ L QT KA LV + M+ ++P
Sbjct: 346 VKFLDKVIEKDIILRPQSSLHMEPSAYNPLIEYLCNNGQTAKAETLVRQLMKLGVLDP-- 403
Query: 269 FTFYALIKGFVNEGNLEEA 287
LI+G EG+ + A
Sbjct: 404 IALNTLIRGHSQEGSPDSA 422
Score = 44.3 bits (103), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 73/164 (44%), Gaps = 4/164 (2%)
Query: 128 LSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLY 187
L +N L GA KK + F+ + E + ++ II+ L+ A +L
Sbjct: 14 LVYNVLHGA----KKAEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 188 EMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEK 247
+M KKG+ D + ++ + G ++ K+++ M + V ++SY+A +
Sbjct: 70 DMPKKGLEWDEDLWVLMIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRG 129
Query: 248 QTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY 291
+ A +M S+ I P TF +I GF G ++ A R++
Sbjct: 130 RYMMAKRYFNKMLSEGIEPTRHTFNFMIWGFFLSGKVDTANRFF 173
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 75/162 (46%), Gaps = 10/162 (6%)
Query: 90 SKEGFTARLIALYGKAAMFENARKVFDEM--------PGRNCEQTVLSFNALLGACVNSK 141
++ G LI KA ++ A K D++ P + ++N L+ N+
Sbjct: 324 TEAGHYGVLIENCCKAGQYDRAVKFLDKVIEKDIILRPQSSLHMEPSAYNPLIEYLCNNG 383
Query: 142 KFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITF 201
+ + + L + L KLG+ D ++ NT+I+ +GS DSA LL M ++ + + +
Sbjct: 384 QTAKAETLVRQL-MKLGV-LDPIALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEESAY 441
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
++L+ + ADA+ ++MV P+ Y + ++ L
Sbjct: 442 DSLVQSYLRKNEPADAKAALDSMVENGHLPDSSLYRSVMESL 483
>gi|255561325|ref|XP_002521673.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539064|gb|EEF40660.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 341
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 149/300 (49%), Gaps = 13/300 (4%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
+ I N++ + D++ D ++ N +YT + +LA AK F IE+I++ K
Sbjct: 3 IFESIKDPNSVFSVWDQYTNRKD---YKPNEALYTLVINKLAQAKNFDAIEDIMQRIKLE 59
Query: 87 KDIS-KEGFTARLIALYGK-AAMFENARKVFDEMP-GRNCEQTVLSFNALLGACVNSKKF 143
K GF +I +YG A + A +MP G NC V +FN +L V+++ F
Sbjct: 60 KSCRLSNGFFYNVIKIYGHLAGRIKVAIDTLFDMPRGYNCWPDVKTFNLVLNLLVSARIF 119
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT 203
D V +++ P LG+E D N +IK + G L++A +L E K+ + ++ TF+T
Sbjct: 120 DVVHEIYEKAP-ILGVEIDACCLNILIKGLCENGDLEAAFYVLDEFPKQRCKPNVRTFST 178
Query: 204 LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
L+ + G A + + M N + + ++N + GL + ++ +EL+ +M+ K
Sbjct: 179 LMHYLCAKGEVNQAFGLLDRMENEGIEVDTITFNILISGLRKRGRIEEGMELLVKMKLKG 238
Query: 264 INPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKAIF---KLLVPFVCEK---GDLD 317
P+ ++ ++ G ++ G EAK + ++ C N F K L+ +C++ G++D
Sbjct: 239 CEPNAGSYQEVLYGLLDAGKFSEAKDFMDRMVCEGNGPSFVSYKKLIDGLCKEKLIGEVD 298
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 95/209 (45%), Gaps = 14/209 (6%)
Query: 160 EPDLVSYNTIIKAFVDKGSLDSANTLLYEME-KKGIRL-DLITFNTLLLGFYSNGRFADA 217
+P+ Y +I + D+ ++ ++ +K RL + +N + + + GR A
Sbjct: 27 KPNEALYTLVINKLAQAKNFDAIEDIMQRIKLEKSCRLSNGFFYNVIKIYGHLAGRIKVA 86
Query: 218 -EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE----INPDVFTFY 272
+ +++ N P+V+++N L+ L + + ++V E+ K + D
Sbjct: 87 IDTLFDMPRGYNCWPDVKTFNLVLNLLV----SARIFDVVHEIYEKAPILGVEIDACCLN 142
Query: 273 ALIKGFVNEGNLEEA---KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSE 329
LIKG G+LE A + K C N F L+ ++C KG+++ AF L R +E
Sbjct: 143 ILIKGLCENGDLEAAFYVLDEFPKQRCKPNVRTFSTLMHYLCAKGEVNQAFGLLDRMENE 202
Query: 330 RCLVDQAPLQLVVDRLAKELRVEEAKELV 358
VD +++ L K R+EE EL+
Sbjct: 203 GIEVDTITFNILISGLRKRGRIEEGMELL 231
>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 687
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 113/221 (51%), Gaps = 4/221 (1%)
Query: 102 YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEP 161
+ K M + A ++ +M C +++N L+ +S + ++ L +D+ +LG+E
Sbjct: 212 FCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDML-RLGLEV 270
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
+ +Y+ +I+ + +KG ++ A+ L EM +G ++T+NT++ G GR +DA K+
Sbjct: 271 SVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLL 330
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
+ MVN N+ P++ SYN + G +A L E+R + + P V T+ LI G
Sbjct: 331 DVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRL 390
Query: 282 GNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFA 319
G+L+ A R + K G + F V C+ G+L A
Sbjct: 391 GDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMA 431
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 121/255 (47%), Gaps = 4/255 (1%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
E A+++ +M E +V +++ L+ + +E L +++ + G P +V+YN
Sbjct: 253 MEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSR-GAVPTVVTYN 311
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
TI+ G + A LL M K + DL+++NTL+ G+ G +A ++ +
Sbjct: 312 TIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYR 371
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
++ P+V +YN +DGL A+ L EM +PDVFTF ++GF GNL A
Sbjct: 372 SLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMA 431
Query: 288 KRWYNKS-GCGMNKAIFKLLVPFVCE--KGDLDFAFNLCKRTFSERCLVDQAPLQLVVDR 344
K +++ G+ F + V E GD AF + + + D + +D
Sbjct: 432 KELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDG 491
Query: 345 LAKELRVEEAKELVE 359
L K ++EA ELV+
Sbjct: 492 LHKLGNLKEASELVK 506
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 94/195 (48%), Gaps = 3/195 (1%)
Query: 101 LYG--KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLG 158
+YG K +ARK+ D M +N ++S+N L+ E LF +L ++
Sbjct: 314 MYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYR-S 372
Query: 159 IEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAE 218
+ P +V+YNT+I G LD A L EM K G D+ TF T + GF G A+
Sbjct: 373 LAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAK 432
Query: 219 KIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGF 278
++++ M+N ++P+ +Y R+ G KA + EM ++ PD+ T+ I G
Sbjct: 433 ELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGL 492
Query: 279 VNEGNLEEAKRWYNK 293
GNL+EA K
Sbjct: 493 HKLGNLKEASELVKK 507
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 86/176 (48%), Gaps = 1/176 (0%)
Query: 116 DEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVD 175
+EM R ++++N + E L K + + G+ PD V+Y +II A +
Sbjct: 471 EEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYN-GLVPDHVTYTSIIHAHLM 529
Query: 176 KGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRS 235
G L A L EM KGI ++T+ L+ + GR A + M V PNV +
Sbjct: 530 AGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVIT 589
Query: 236 YNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY 291
YNA ++GL ++ +A EM++K I+P+ +T+ LI N G+ +EA R Y
Sbjct: 590 YNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLY 645
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 4/212 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI Y + A +F E+ R+ +V+++N L+ D V KD K
Sbjct: 348 LIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLD-VAMRLKDEMIKH 406
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G +PD+ ++ T ++ F G+L A L EM +G++ D + T ++G G + A
Sbjct: 407 GPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKA 466
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ E M+ P++ +YN +DGL K+A ELV +M + PD T+ ++I
Sbjct: 467 FGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHA 526
Query: 278 FVNEGNLEEAKRWYNKSGCGMNKAIFKLLVPF 309
+ G+L +A+ + + ++K IF +V +
Sbjct: 527 HLMAGHLRKARALFLEM---LSKGIFPSVVTY 555
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 114/263 (43%), Gaps = 38/263 (14%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+ +Y K ++ E VF +M + V + N +L + +V ++ +
Sbjct: 137 LLWIYVKKSLLEKCLLVFYKMVSKGLLPDVKNCNRVLRLLRDRDNNIDVAREVYNVMVEC 196
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEME--------------------------- 190
GI P +V+YNT++ +F KG + A LL++M+
Sbjct: 197 GICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQA 256
Query: 191 --------KKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDG 242
+ G+ + + T++ L+ G+ G+ +A ++ E M++ P V +YN + G
Sbjct: 257 KELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYG 316
Query: 243 LAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMN 299
L + A +L+ M +K + PD+ ++ LI G+ GN+ EA + + +
Sbjct: 317 LCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPS 376
Query: 300 KAIFKLLVPFVCEKGDLDFAFNL 322
+ L+ +C GDLD A L
Sbjct: 377 VVTYNTLIDGLCRLGDLDVAMRL 399
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 91/192 (47%), Gaps = 4/192 (2%)
Query: 173 FVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD-AEKIWETMVNMNVRP 231
+V K L+ + Y+M KG+ D+ N +L D A +++ MV + P
Sbjct: 141 YVKKSLLEKCLLVFYKMVSKGLLPDVKNCNRVLRLLRDRDNNIDVAREVYNVMVECGICP 200
Query: 232 NVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY 291
V +YN LD + ++AL+L+ +M++ +P+ T+ L+ G + G +E+AK
Sbjct: 201 TVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELI 260
Query: 292 N---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKE 348
+ G ++ + L+ CEKG ++ A L + S + ++ L K
Sbjct: 261 QDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKW 320
Query: 349 LRVEEAKELVEL 360
RV +A++L+++
Sbjct: 321 GRVSDARKLLDV 332
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 79/170 (46%), Gaps = 1/170 (0%)
Query: 128 LSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLY 187
+++ +++ A + + + LF ++ K GI P +V+Y +I ++ +G L A +
Sbjct: 518 VTYTSIIHAHLMAGHLRKARALFLEMLSK-GIFPSVVTYTVLIHSYAVRGRLKLAILHFF 576
Query: 188 EMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEK 247
EM +KG+ ++IT+N L+ G + A + M + PN +Y ++
Sbjct: 577 EMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLG 636
Query: 248 QTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCG 297
++AL L +M +EI PD T +L+K + L + N G
Sbjct: 637 HWQEALRLYKDMLDREIQPDSCTHRSLLKHLNKDYKLHVVRHLENVIAAG 686
>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
Length = 814
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 126/283 (44%), Gaps = 16/283 (5%)
Query: 44 FKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIAL-- 101
F + +G + ++T V+ L AKR + E+ + + K GF IA
Sbjct: 212 FHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREV------FGQMEKCGFPPDAIAYNT 265
Query: 102 ----YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
KA + A KV D M + C T +++ L+ + + + + LF+ +
Sbjct: 266 MIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAAS- 324
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G P+ V Y ++I F G + A +L EM + G R D+IT ++ G +G F A
Sbjct: 325 GFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQA 384
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
K +E M+ +PNV +Y + GL+ + A ++ M + PD T+ L+ G
Sbjct: 385 AKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDG 444
Query: 278 FVNEGNLEEAKRW---YNKSGCGMNKAIFKLLVPFVCEKGDLD 317
F G L+EA + +K N ++ LV +C+ G ++
Sbjct: 445 FCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVE 487
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 140/328 (42%), Gaps = 12/328 (3%)
Query: 39 RLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRF-RWIEEILEHQKQYKDISKEGFTAR 97
+L+D+ K S N +Y+ V L + + ++++ E K + G
Sbjct: 456 QLLDELDKCSS----SPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCS 511
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSK--KFDEVDGLFKDLPH 155
+I K + A ++F M C+ ++N L+ S+ + + L DL
Sbjct: 512 IIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDL-E 570
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
K+G PD V+Y + G +D A +L E +G D++ + L G G+
Sbjct: 571 KVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVD 630
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
A +++ MV P+ +Y ++GL K+ + A + EM K P V T+ AL+
Sbjct: 631 RAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALV 690
Query: 276 KGFVNEGNLEEA-KRWYNKSGCGM---NKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERC 331
+ + GN++EA R+ + G + I+ L+ C+ +D A L + S
Sbjct: 691 QALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGN 750
Query: 332 LVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ + D L + + E+A+EL++
Sbjct: 751 VPTAVTSASLFDGLVRSGKTEKAQELLQ 778
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/311 (19%), Positives = 123/311 (39%), Gaps = 47/311 (15%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSF----NALLGACVNSKKFDEVDGLFKDL 153
LI + + ++A F+ M + C+ + +F + L A ++ K F+ +F ++
Sbjct: 160 LIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFE----VFHEM 215
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
+ PD + +++ + + A + +MEK G D I +NT++ G G
Sbjct: 216 MAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGH 275
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
+A K+ + M+ P +Y ++ L ++A EL M + P+ + +
Sbjct: 276 AQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTS 335
Query: 274 LIKGFVNEGNLEEAKRWYN--------------------------------------KSG 295
LI GF G ++EA ++ + G
Sbjct: 336 LIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGG 395
Query: 296 CGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAK 355
C N + ++ + + G + AF + K + C D ++D K R++EA
Sbjct: 396 CKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAA 455
Query: 356 ELV-ELGKTNS 365
+L+ EL K +S
Sbjct: 456 QLLDELDKCSS 466
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 76/155 (49%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K E+A K FDEM G+ + TV ++ AL+ A ++ DE F+ + + + +
Sbjct: 660 KVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSV 719
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
+ Y+ +I F +D+A L +M +G +T +L G +G+ A+++ +
Sbjct: 720 MIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQE 779
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
M P+ ++ A LDGL ++ K L+LV E
Sbjct: 780 MAAGGSPPHAATFTAILDGLRKSDESGKLLKLVQE 814
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 93/210 (44%), Gaps = 8/210 (3%)
Query: 76 IEEILEHQKQYKDISKEGFTARLIALYGKA------AMFENARKVFDEMPGRNCEQTVLS 129
I E+ K ++ S G+ A ++A + A +F EM + +
Sbjct: 591 IGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAA 650
Query: 130 FNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEM 189
+ ++ + KK ++ F ++ K G +P + +Y +++A G++D A M
Sbjct: 651 YCCIINGLIKVKKLEDACKFFDEMIGK-GQKPTVATYTALVQALCHAGNVDEAFHRFESM 709
Query: 190 EKKG-IRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
+G + ++ ++ L+ GF + A K++E M++ P + + DGL +
Sbjct: 710 LARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGK 769
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGF 278
T+KA EL+ EM + P TF A++ G
Sbjct: 770 TEKAQELLQEMAAGGSPPHAATFTAILDGL 799
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 94/212 (44%), Gaps = 4/212 (1%)
Query: 150 FKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFY 209
F+ + G + D+ +YN ++ V + + + EM K GI + +FN L+ F
Sbjct: 106 FRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFA 165
Query: 210 SNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE-INPDV 268
R DA +E M +P++ ++ +D L +KA E+ EM + + PD
Sbjct: 166 RTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDR 225
Query: 269 FTFYALIKGFVNEGNLEEAKRWYNK-SGCGM--NKAIFKLLVPFVCEKGDLDFAFNLCKR 325
A+++ + ++EA+ + + CG + + ++ + + G A +
Sbjct: 226 ALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDN 285
Query: 326 TFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
++ C+ + ++V+ L K +E A+EL
Sbjct: 286 MLAKACVPTEVTYGILVNSLCKAGTLERAEEL 317
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 103/191 (53%), Gaps = 3/191 (1%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEPD 162
K M AR VF+ M + E ++NAL+ G C+N++ DE + + K G P
Sbjct: 314 KEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQ-MDEAQKVLDIMVDK-GCAPV 371
Query: 163 LVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWE 222
+ SYN +I + + LD A +LL EM +K + D +T++TL+ G GR +A +++
Sbjct: 372 VHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFK 431
Query: 223 TMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEG 282
M + + P++ +Y+ LDGL +AL+L+ M+ +I PD+ + LI+G G
Sbjct: 432 EMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAG 491
Query: 283 NLEEAKRWYNK 293
LE AK ++K
Sbjct: 492 KLEVAKELFSK 502
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 119/252 (47%), Gaps = 4/252 (1%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A ++ +M + C+ ++++ ++ + ++ L ++ + GI PD+V+Y+TI+
Sbjct: 216 ALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDR-GIPPDVVTYSTIL 274
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
F G L+ A L EM + + + +TF L+ G G ++A ++E M
Sbjct: 275 HGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAE 334
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
PN +YNA +DG + Q +A +++ M K P V ++ LI G+ L+EAK
Sbjct: 335 PNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSL 394
Query: 291 ---YNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAK 347
++ + + L+ +C+ G A NL K S L D ++D L K
Sbjct: 395 LVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCK 454
Query: 348 ELRVEEAKELVE 359
++EA +L++
Sbjct: 455 HGHLDEALKLLK 466
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 116/252 (46%), Gaps = 6/252 (2%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTI 169
A V +M + ++FN L+ G C+ + E GLF ++ + G +PD++SY+T+
Sbjct: 146 AISVLGKMFKLGIQPDAITFNTLINGRCIEGE-IKEAVGLFNEMVRR-GHQPDVISYSTV 203
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
I G+ A LL +ME+KG + +L+ + T++ + DA + MV+ +
Sbjct: 204 INGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGI 263
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
P+V +Y+ L G +A L EM + + P+ TF L+ G EG + EA+
Sbjct: 264 PPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARC 323
Query: 290 WY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLA 346
+ K G N + L+ C +D A + + C ++++
Sbjct: 324 VFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYC 383
Query: 347 KELRVEEAKELV 358
K R++EAK L+
Sbjct: 384 KRRRLDEAKSLL 395
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 112/255 (43%), Gaps = 4/255 (1%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
++A F M N +V+ F LG+ K++ V L + G+ ++ S N
Sbjct: 73 IDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQM-DLFGVTHNVYSLN 131
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
+I + A ++L +M K GI+ D ITFNTL+ G G +A ++ MV
Sbjct: 132 ILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRR 191
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+P+V SY+ ++GL T AL+L+ +M K P++ + +I + + +A
Sbjct: 192 GHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDA 251
Query: 288 KRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDR 344
++ G + + ++ C G L+ A L + + ++VD
Sbjct: 252 MDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDG 311
Query: 345 LAKELRVEEAKELVE 359
L KE V EA+ + E
Sbjct: 312 LCKEGMVSEARCVFE 326
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 75/167 (44%), Gaps = 1/167 (0%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
+ A +F EM +++++ LL DE L K + IEPD+V YN
Sbjct: 424 QEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQES-KIEPDIVLYNI 482
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
+I+ G L+ A L ++ GI+ + T+ ++ G G +A +++ M +
Sbjct: 483 LIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDG 542
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
PN SYN + G + + A+ L+ EM K + D TF L+
Sbjct: 543 FLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLL 589
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 60/138 (43%), Gaps = 1/138 (0%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K + A K+ M E ++ +N L+ + K + LF L GI+P +
Sbjct: 454 KHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFAD-GIQPTI 512
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
+Y +IK + +G D A L +ME G + ++N ++ GF N + A ++ +
Sbjct: 513 RTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDE 572
Query: 224 MVNMNVRPNVRSYNARLD 241
MV + ++ LD
Sbjct: 573 MVGKRFSADSSTFQMLLD 590
>gi|297842914|ref|XP_002889338.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335180|gb|EFH65597.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 712
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 133/300 (44%), Gaps = 31/300 (10%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI YG A +F+ + +F M +VL+FN+LL + + +F ++
Sbjct: 147 LIRSYGNAGLFQESVNLFQTMKKMGISPSVLTFNSLLSILLKRGRTGMAHDMFDEMRRTY 206
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ PD ++NT+I F +D A T+ EME D++T+NT++ G G+ A
Sbjct: 207 GVTPDSYTFNTLISGFCKNSMVDQAFTIFKEMELYSCNPDVVTYNTIIDGLCRAGKVKIA 266
Query: 218 EKIWETMVN--MNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
+ M+ V PN+ SY L G ++++ +AL + EM ++ + P+ T+ LI
Sbjct: 267 HNLLNGMLKKATAVHPNIVSYTTLLRGYCMKQEIDEALLVFHEMLTRGLKPNAVTYNTLI 326
Query: 276 KGFVNEGNLEEAKRW---------YNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRT 326
KG +E K + ++ C F +L+ C+ G LD A + +
Sbjct: 327 KGLSEAHRYDEIKGFLIGGDAFTTFSPDAC-----TFNILIKAHCDAGHLDAAMKVFQEM 381
Query: 327 FSERCLVDQAPLQLVVDRLAKELRVEEAKEL--------VELGKTNSYCR-----YNLKF 373
+ + D A +++ L ++A+ L V LGK C+ YNL F
Sbjct: 382 LNMKLHPDSASYSVLIRTLCLRNEFDKAETLFNELFEKEVLLGKNE--CKPLAAAYNLMF 439
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 90/184 (48%), Gaps = 8/184 (4%)
Query: 147 DGL-FKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKG---IRLDLITFN 202
DGL F D + G S+ +++ +L++A L+ +EK+ ++L FN
Sbjct: 86 DGLRFFDWVYNKGFSHKEQSFFLMLEFLGRARNLNAARNFLFSIEKRSNGCVKLQDRYFN 145
Query: 203 TLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM-RS 261
+L+ + + G F ++ +++TM M + P+V ++N+ L L +T A ++ EM R+
Sbjct: 146 SLIRSYGNAGLFQESVNLFQTMKKMGISPSVLTFNSLLSILLKRGRTGMAHDMFDEMRRT 205
Query: 262 KEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS---GCGMNKAIFKLLVPFVCEKGDLDF 318
+ PD +TF LI GF +++A + + C + + ++ +C G +
Sbjct: 206 YGVTPDSYTFNTLISGFCKNSMVDQAFTIFKEMELYSCNPDVVTYNTIIDGLCRAGKVKI 265
Query: 319 AFNL 322
A NL
Sbjct: 266 AHNL 269
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 113/273 (41%), Gaps = 11/273 (4%)
Query: 16 ATATGPKFIG--SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRF 73
ATA P + +++RG + + + F + G + N Y ++ L+ A R+
Sbjct: 277 ATAVHPNIVSYTTLLRGYCMKQEIDEALLVFHEMLTRG-LKPNAVTYNTLIKGLSEAHRY 335
Query: 74 RWIEEILEHQKQYKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNA 132
I+ L + S + T LI + A + A KVF EM S++
Sbjct: 336 DEIKGFLIGGDAFTTFSPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSV 395
Query: 133 LLGACVNSKKFDEVDGLFKDLPHK---LG---IEPDLVSYNTIIKAFVDKGSLDSANTLL 186
L+ +FD+ + LF +L K LG +P +YN + + G A +
Sbjct: 396 LIRTLCLRNEFDKAETLFNELFEKEVLLGKNECKPLAAAYNLMFEYLCANGKAKQAEKVF 455
Query: 187 YEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIE 246
++ K+G + D ++ TL+ G G+F A ++ M+ P+ +Y +DGL
Sbjct: 456 RQLMKRGAQ-DPSSYRTLITGLCREGKFKAAYELLVLMLRREFVPDPETYEVLIDGLLKI 514
Query: 247 KQTKKALELVGEMRSKEINPDVFTFYALIKGFV 279
+ A + + M P TF++++ V
Sbjct: 515 GEALLAHDTLQRMLRSSYLPVATTFHSVLAELV 547
>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
Length = 702
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 117/265 (44%), Gaps = 45/265 (16%)
Query: 95 TARLIAL--YGKAAMFENARKVFDEMPGR-NCEQTVLSFNALLGACVNSKKFDEVDGLFK 151
+A L+ L + +A M + A F ++P C V S N LL A V ++++ + D F
Sbjct: 84 SAALVVLSAFSRALMPDAALAAFRDLPSLLGCNPGVRSHNTLLDAFVRARRYSDADAFFA 143
Query: 152 DLPH--------------------------------------KLGIEPDLVSYNTIIKAF 173
L H + G+ PD V+Y+T++
Sbjct: 144 SLSHGAFGRRIAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGL 203
Query: 174 VDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMV-NMNVRPN 232
LD+A LL EM G++ D + +N LL G + G F A K+WE +V + PN
Sbjct: 204 AKHDQLDNALDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPN 263
Query: 233 VRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN 292
+ +Y LDGL + K+A E+ M + D T+ LI G G+++ A R Y+
Sbjct: 264 LATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYS 323
Query: 293 ---KSGCGMNKAIFKLLVPFVCEKG 314
K+G ++ +++ L+ CE G
Sbjct: 324 DMVKAGLVLDVSVYNSLIKGFCEVG 348
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/301 (20%), Positives = 131/301 (43%), Gaps = 47/301 (15%)
Query: 25 GSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQK 84
G++I G+ + R + + + + G + Y+ + R R E+
Sbjct: 408 GTLIHGLCENGYANRAFEILEDARNSGE-ELDVFSYSSMINRFCKDGRTHDANEV----- 461
Query: 85 QYKDISKEGFTAR------LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACV 138
YK++ K+G LI + + + +A K++ EM C T++++N L+
Sbjct: 462 -YKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLC 520
Query: 139 NSKKFDEVDGLFKDLPHK----------------------------------LGIEPDLV 164
++K+ E L K++ + G++ D++
Sbjct: 521 KAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVM 580
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
+N +I G +D A + EM++K +L+T+NTL+ GFY G A +W +
Sbjct: 581 VHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAI 640
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
++ ++P++ +YN R+ GL +T + + L+ E+ + I P V T+ L++ + G +
Sbjct: 641 LDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVRAVIKYGPI 700
Query: 285 E 285
+
Sbjct: 701 Q 701
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 115/264 (43%), Gaps = 5/264 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L++ K +NA + DEMP + + +NALL C + F++ +++ L
Sbjct: 199 LMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDP 258
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G P+L +Y ++ G A + M + D +T+ L+ G +G A
Sbjct: 259 GASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSA 318
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+++ MV + +V YN+ + G +T +A + I + T+ + KG
Sbjct: 319 ARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIR-QITTYNIMTKG 377
Query: 278 FVNEGNLEEA----KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV 333
++ G + EA K+ N + C +K F L+ +CE G + AF + + + +
Sbjct: 378 LLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEEL 437
Query: 334 DQAPLQLVVDRLAKELRVEEAKEL 357
D +++R K+ R +A E+
Sbjct: 438 DVFSYSSMINRFCKDGRTHDANEV 461
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 117/280 (41%), Gaps = 10/280 (3%)
Query: 84 KQYKDISKEGFTA------RLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGAC 137
+ Y D+ K G LI + + A K +D G + + + ++N +
Sbjct: 320 RVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDST-GFSGIRQITTYNIMTKGL 378
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLD 197
++S E L K L + PD V++ T+I + G + A +L + G LD
Sbjct: 379 LDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELD 438
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
+ ++++++ F +GR DA ++++ MV +PN YNA ++G + A+++
Sbjct: 439 VFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYI 498
Query: 258 EMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKG 314
EM S P + T+ LI G +EA + G + + L+ +C
Sbjct: 499 EMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDK 558
Query: 315 DLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA 354
+D A + VD +++ L +V+EA
Sbjct: 559 KVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEA 598
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 103/214 (48%), Gaps = 1/214 (0%)
Query: 78 EILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGAC 137
EILE + + + +I + K +A +V+ M C+ +NAL+
Sbjct: 425 EILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGF 484
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLD 197
K ++ ++ ++ G P +++YNT+I A++L EM ++G + D
Sbjct: 485 CRVSKINDAIKIYIEMTSN-GCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPD 543
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
+ T+ +L+ G + + A +IW+ +++ ++ +V +N + GL + +A +
Sbjct: 544 IRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYL 603
Query: 258 EMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY 291
EM+ K +P++ T+ L+ GF G++++A +
Sbjct: 604 EMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLW 637
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 97/222 (43%), Gaps = 8/222 (3%)
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEK----KGIRLDLI 199
D F+DLP LG P + S+NT++ AFV A+ + + I +L
Sbjct: 100 DAALAAFRDLPSLLGCNPGVRSHNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQ 159
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
T+N +L + G A ++ ++ V P+ +Y+ + GLA Q AL+L+ EM
Sbjct: 160 TYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEM 219
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK----SGCGMNKAIFKLLVPFVCEKGD 315
+ + D + AL+ G G E+A + + + G N A +K+++ +C+ G
Sbjct: 220 PNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGR 279
Query: 316 LDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
A + R + D +++ L + V+ A +
Sbjct: 280 FKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARV 321
>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
Length = 991
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 125/285 (43%), Gaps = 7/285 (2%)
Query: 81 EHQKQYKDISKEGFTARLIAL------YGKAAMFENARKVFDEMPGRNCEQTVLSFNALL 134
E ++ + KEGFT ++ Y A F++A ++ ++M C+ + F L+
Sbjct: 375 EAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLI 434
Query: 135 GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGI 194
+ + + E L ++ G+ P++++Y +II + G +D A +L ME+ G
Sbjct: 435 NSLIKKDRLKEAKELLNEISAN-GLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGC 493
Query: 195 RLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALE 254
+ + T+N+L+ G + + A + M + PNV +Y L G E A
Sbjct: 494 QPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFR 553
Query: 255 LVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKAIFKLLVPFVCEKG 314
L M + PD + L G EEA + + G + K + L+ + G
Sbjct: 554 LFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAG 613
Query: 315 DLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ DFA L +R E C D +++ L K+ R+ EA +++
Sbjct: 614 NTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILD 658
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 150/341 (43%), Gaps = 48/341 (14%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTAR--LIALYGKAAMFENARKVFDE 117
YT +Q L AK R E ++ +D A LI+ K+ +AR +FD
Sbjct: 256 YTILIQGLCEAKCVR--EALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDA 313
Query: 118 MPGRNCEQTVLSFNALLGACVNSKKFDEV-DGL-FKDLPHKLGIEPDLVSYNTIIKAFVD 175
MP +V+++NA++ V K + D L K+L K G PD +YNT+I D
Sbjct: 314 MPQNGVVPSVMTYNAMI---VGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCD 370
Query: 176 KGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRS 235
+ + + A LL K+G ++TF L+ G+ +F DA ++ M++ + +++
Sbjct: 371 QKT-EEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQV 429
Query: 236 YNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLE---EAKRWYN 292
+ ++ L + + K+A EL+ E+ + + P+V T+ ++I G+ G ++ E +
Sbjct: 430 FGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMME 489
Query: 293 KSGCG------------------MNKAIFKL-------LVPFV----------CEKGDLD 317
+ GC ++KA+ L ++P V C++ D D
Sbjct: 490 RDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFD 549
Query: 318 FAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
AF L + D+ ++ D L K R EEA +
Sbjct: 550 NAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFI 590
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 116/264 (43%), Gaps = 5/264 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I Y K A + F + E + NAL+ + + + LF +P +
Sbjct: 189 MIKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMP-LM 247
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G + + SY +I+ + + A L M++ G ++ F L+ G +GR DA
Sbjct: 248 GCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDA 307
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+++ M V P+V +YNA + G + + AL++ M +PD +T+ LI G
Sbjct: 308 RLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYG 367
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
++ EEA+ N K G F L+ C D A + + S +C +D
Sbjct: 368 LCDQKT-EEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLD 426
Query: 335 QAPLQLVVDRLAKELRVEEAKELV 358
+++ L K+ R++EAKEL+
Sbjct: 427 LQVFGKLINSLIKKDRLKEAKELL 450
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 68/135 (50%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ PD V+YNT+IK++ +G L +A+ + + G+ + T N L+LG+ G A
Sbjct: 178 GLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYCRTGELRKA 237
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ M M + N SY + GL K ++AL L M+ +P+V F LI G
Sbjct: 238 CWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISG 297
Query: 278 FVNEGNLEEAKRWYN 292
G + +A+ ++
Sbjct: 298 LCKSGRVGDARLLFD 312
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 92/227 (40%), Gaps = 7/227 (3%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
F+NA ++F+ M + ++ L A + + +E + G+ V Y
Sbjct: 548 FDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIV----RKGVALTKVYYT 603
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
T+I F G+ D A TL+ M +G D T++ LL R +A I + M
Sbjct: 604 TLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLR 663
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
++ + +Y +D + E + A + EM S P T+ I + EG LE+A
Sbjct: 664 GIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDA 723
Query: 288 KRW---YNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERC 331
+ + G + + +L+ G +D AF+ KR C
Sbjct: 724 EDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASC 770
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 107/266 (40%), Gaps = 26/266 (9%)
Query: 102 YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLG--I 159
Y K E+A + +M V+++N L+ C +D F L +G
Sbjct: 714 YCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGC---GHMGYIDRAFSTLKRMVGASC 770
Query: 160 EPDLVSYNTIIKAFVDKGSL-----------------DSANTLLYEMEKKGIRLDLITFN 202
EP+ +Y ++K + KG+L D LL M K G+ + T++
Sbjct: 771 EPNYWTYCLLLKHLL-KGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYS 829
Query: 203 TLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
+L+ GF GR +A + + M + PN Y + K +KAL V M
Sbjct: 830 SLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSEC 889
Query: 263 EINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFA 319
P + ++ L+ G NEG+ E+ K + + G ++ +K+L + + G +D
Sbjct: 890 GFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDIC 949
Query: 320 FNLCKRTFSERCLVDQAPLQLVVDRL 345
F + C + LV +++
Sbjct: 950 FQMLSIMEKRYCCISSQTYALVTNKM 975
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 80/165 (48%), Gaps = 6/165 (3%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G PD +Y+ ++ A + L+ A +L +M +GI+ + + L+ G+ A
Sbjct: 629 GCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHA 688
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++++ M + +P+ +Y ++ E + + A +L+ +M + + PDV T+ LI G
Sbjct: 689 KRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDG 748
Query: 278 FVNEGNLEEA----KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDF 318
+ G ++ A KR S C N + LL+ + KG+L +
Sbjct: 749 CGHMGYIDRAFSTLKRMVGAS-CEPNYWTYCLLLKHLL-KGNLAY 791
Score = 44.3 bits (103), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 39/202 (19%), Positives = 78/202 (38%), Gaps = 15/202 (7%)
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT 203
D + + + +L + P YN +++ + + ++ + G+ D +T+NT
Sbjct: 131 DAIQAIRRTGSARLALSPK--CYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNT 188
Query: 204 LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
++ + G A + + ++ + P + NA + G + +KA L M
Sbjct: 189 MIKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMG 248
Query: 264 INPDVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAF 320
+ +++ LI+G + EA + + GC N F L+ +C+ G
Sbjct: 249 CQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSG------ 302
Query: 321 NLCKRTFSERCLVDQAPLQLVV 342
R R L D P VV
Sbjct: 303 ----RVGDARLLFDAMPQNGVV 320
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 51/117 (43%), Gaps = 1/117 (0%)
Query: 96 ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPH 155
+ LIA + KA E A + D M G+ + L+ C ++K F++ F +
Sbjct: 829 SSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALS-FVSIMS 887
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNG 212
+ G +P L SY ++ ++G + +L ++ + G D + + L G G
Sbjct: 888 ECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAG 944
>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g12775, mitochondrial-like [Glycine max]
Length = 750
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 122/234 (52%), Gaps = 11/234 (4%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEPD 162
K + +A ++ EM + V+++NAL+ G C+ E L ++ K I PD
Sbjct: 215 KNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGH-LKEAFSLLNEMKLK-NINPD 272
Query: 163 LVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWE 222
+ ++NT+I A +G + +A +L M K I+ D++T+N+L+ G++ + +A+ ++
Sbjct: 273 VCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFY 332
Query: 223 TMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEG 282
+M V PNVR+Y +DGL EK +A+ L EM+ K + PD+ T+ +LI G
Sbjct: 333 SMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNH 392
Query: 283 NLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV 333
+LE A K G + + +L+ +C+ G L+ A + F +R LV
Sbjct: 393 HLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENA-----KEFFQRLLV 441
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/352 (21%), Positives = 153/352 (43%), Gaps = 46/352 (13%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTV--------QRLANAKRF--RW 75
S+I G+ K ++L+R + KK + G +Y+ T+ RL NAK F R
Sbjct: 383 SLIDGLCKNHHLERAIALCKKMKEQG---IQPDVYSYTILLDALCKGGRLENAKEFFQRL 439
Query: 76 IEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLG 135
+ + Q ++ G KA +F A + +M G+ C ++F ++
Sbjct: 440 LVKGYHLNVQTYNVMINGLC--------KADLFGEAMDLKSKMEGKGCMPDAITFKTIIC 491
Query: 136 ACVNSKKFDEVDGLFKDLPH----------------------KLGIEPDLVSYNTIIKAF 173
A + D+ + + +++ K I+PD+V+Y T++ +
Sbjct: 492 ALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGY 551
Query: 174 VDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNV 233
L A + Y M + G+ ++ + ++ G +A ++E M + N+ PN+
Sbjct: 552 FLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNI 611
Query: 234 RSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK 293
+Y + +D L ++A+ L+ EM+ I PDV+++ L+ G G LE AK + +
Sbjct: 612 VTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQR 671
Query: 294 ---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVV 342
G +N ++ ++ +C+ G D A +L + + C+ D +++
Sbjct: 672 LLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDIII 723
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 70/139 (50%)
Query: 150 FKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFY 209
F D G + + VSY T+I G + LL ++E ++ D++ +NT++
Sbjct: 155 FHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLC 214
Query: 210 SNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVF 269
N DA ++ M+ + PNV +YNA + G I K+A L+ EM+ K INPDV
Sbjct: 215 KNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVC 274
Query: 270 TFYALIKGFVNEGNLEEAK 288
TF LI EG ++ AK
Sbjct: 275 TFNTLIDALGKEGKMKAAK 293
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 115/247 (46%), Gaps = 4/247 (1%)
Query: 116 DEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVD 175
D++ + + +S+ L+ + + V L + L ++PD+V YNTII +
Sbjct: 157 DQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGH-SVKPDVVMYNTIIHSLCK 215
Query: 176 KGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRS 235
L A L EM KGI +++T+N L+ GF G +A + M N+ P+V +
Sbjct: 216 NKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCT 275
Query: 236 YNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY---N 292
+N +D L E + K A ++ M I PDV T+ +LI G+ ++ AK +
Sbjct: 276 FNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMA 335
Query: 293 KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVE 352
+SG N + ++ +C++ +D A +L + + + D ++D L K +E
Sbjct: 336 QSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLE 395
Query: 353 EAKELVE 359
A L +
Sbjct: 396 RAIALCK 402
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 118/290 (40%), Gaps = 57/290 (19%)
Query: 93 GFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKD 152
+T L AL K ENA++ F + + V ++N ++ + F E L
Sbjct: 415 SYTILLDAL-CKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSK 473
Query: 153 LPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKG------------------- 193
+ K G PD +++ TII A +K D A +L EM +G
Sbjct: 474 MEGK-GCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVM 532
Query: 194 ----IRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQT 249
I+ D++T+ TL+ G++ A+ ++ +M M V PNV+ Y +DGL +K
Sbjct: 533 TKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTV 592
Query: 250 KKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKAIFKLLVPF 309
+A+ L EM+ K + P++ T+ +LI
Sbjct: 593 DEAMSLFEEMKHKNMFPNIVTYTSLIDA-------------------------------- 620
Query: 310 VCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+C+ L+ A L K D +++D L K R+E AKE+ +
Sbjct: 621 LCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQ 670
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 101/244 (41%), Gaps = 4/244 (1%)
Query: 115 FDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFV 174
FD M FN +L + VN+K + V LFK G PDL + N ++ F
Sbjct: 51 FDRMLLMRPPPPTFHFNYILSSLVNNKHYPTVISLFKKFESN-GATPDLCTLNILMNCFC 109
Query: 175 DKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVR 234
+ A ++L + K+G + IT NTL+ G G A + +V + N
Sbjct: 110 HLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQV 169
Query: 235 SYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK- 293
SY ++GL +TK L+ ++ + PDV + +I L +A Y++
Sbjct: 170 SYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEM 229
Query: 294 --SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRV 351
G N + LV C G L AF+L + D ++D L KE ++
Sbjct: 230 IVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKM 289
Query: 352 EEAK 355
+ AK
Sbjct: 290 KAAK 293
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 84/167 (50%), Gaps = 1/167 (0%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
+NA+ VF M V ++ ++ K DE LF+++ +K + PD+V+Y +
Sbjct: 325 KNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYK-NMIPDIVTYTS 383
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
+I L+ A L +M+++GI+ D+ ++ LL GR +A++ ++ ++
Sbjct: 384 LIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKG 443
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
NV++YN ++GL +A++L +M K PD TF +I
Sbjct: 444 YHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTII 490
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/154 (20%), Positives = 72/154 (46%), Gaps = 1/154 (0%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
+ A +F+EM +N ++++ +L+ A + + L K++ GI+PD+ SY
Sbjct: 593 DEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEH-GIQPDVYSYTI 651
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
++ G L+ A + + KG L++ + ++ G F +A + M +
Sbjct: 652 LLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKG 711
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
P+ +++ + L + + KA +++ EM ++
Sbjct: 712 CMPDAVTFDIIIWALFEKDENDKAEKILXEMIAR 745
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 73/201 (36%), Gaps = 2/201 (0%)
Query: 25 GSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQK 84
G+++ G + N LK F + +G N YT + L K + E K
Sbjct: 545 GTLMDGYFLVNELKHAKYVFYSMAQMG-VTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMK 603
Query: 85 QYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
LI K E A + EM + V S+ LL S + +
Sbjct: 604 HKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLE 663
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
+F+ L K G ++ Y +I G D A L +ME KG D +TF+ +
Sbjct: 664 GAKEIFQRLLVK-GYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDII 722
Query: 205 LLGFYSNGRFADAEKIWETMV 225
+ + AEKI M+
Sbjct: 723 IWALFEKDENDKAEKILXEMI 743
>gi|255660822|gb|ACU25580.1| pentatricopeptide repeat-containing protein [Mulguraea scoparia]
Length = 418
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 141/313 (45%), Gaps = 4/313 (1%)
Query: 5 SRLLSCSFSTTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTV 64
S + + T T ++ S + Y E+ R + + + +FR +
Sbjct: 49 SAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVI 108
Query: 65 QRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCE 124
+ L K F+ + E + + F L+ + K A+ VFD +
Sbjct: 109 EHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHNFCKGGEIXLAQSVFDSITKWGLR 168
Query: 125 QTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANT 184
+V+SFN L+ + DE L K + G++PD+ +Y+ +I + +D AN
Sbjct: 169 PSVVSFNTLMNGYIKIGDLDEGFRL-KSVMQASGVQPDVYTYSVLINGLCKESKMDDANA 227
Query: 185 LLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLA 244
L EM G+ + +TF TL+ G NGR A +I+ M++ ++ P++ +YN + GL
Sbjct: 228 LFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLC 287
Query: 245 IEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA---KRWYNKSGCGMNKA 301
+ K+A +L+ EM K + PD T+ LI G EG+LE A ++ K ++
Sbjct: 288 KKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDV 347
Query: 302 IFKLLVPFVCEKG 314
+ L+ +C++G
Sbjct: 348 AYTALISXLCQEG 360
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 83/173 (47%), Gaps = 1/173 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K + A +++ +M ++ ++++N L+ + L ++ K
Sbjct: 247 LIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMK- 305
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD ++Y T+I +G L++A M K+ IRLD + + L+ GR DA
Sbjct: 306 GLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISXLCQEGRSVDA 365
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
EK+ M+++ ++P + +Y ++ + +L+ EM+ P+V T
Sbjct: 366 EKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYLPNVVT 418
>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
Length = 837
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 167/354 (47%), Gaps = 14/354 (3%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
S+++G + NL ++ F K ++ G F N Y+ ++ N+ E L Q +
Sbjct: 330 SLMKGYCAQGNLDSALNLFNKITEDGLF-PNKVTYSVLIEGCCNSGNIEKASE-LYTQMK 387
Query: 86 YKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCE-QTVLSFNALLGACVNSKKF 143
I F L+ Y KA ++E A K+FDE +C + ++N ++ K
Sbjct: 388 LNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDE--AVDCGVANIFTYNIMMSWLCKGGKM 445
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT 203
DE L ++ ++ G+ P++VSYN +I KG++D A+++ +M + ++ +++T++
Sbjct: 446 DEACSLLDNMVNQ-GMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSI 504
Query: 204 LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
L+ G + G A +++ M+++N+ P ++N ++GL Q +A + + +
Sbjct: 505 LIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEG 564
Query: 264 INPDVFTFYALIKGFVNEGNLEEAKRWYNKS---GCGMNKAIFKLLVPFVCEKGDLDFAF 320
P T+ +++ GF+ EGN++ A Y + G N + L+ C+ +D A
Sbjct: 565 FIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLAL 624
Query: 321 NLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAK----ELVELGKTNSYCRYN 370
+ +D ++D K +E A+ EL+E+G + + YN
Sbjct: 625 KTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYN 678
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 130/277 (46%), Gaps = 10/277 (3%)
Query: 76 IEEILEHQKQYKDISKEGFTAR------LIALYGKAAMFENARKVFDEMPGRNCEQTVLS 129
+ ++ E + + K+ +EGF ++ + K ++A V+ EM V++
Sbjct: 547 VGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVT 606
Query: 130 FNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEM 189
+ +L+ S + D ++ K G+E D+ +Y+ +I F + ++SA L +E+
Sbjct: 607 YTSLINGFCKSNRIDLALKTRDEMREK-GLELDVTAYSALIDGFCKRRDMESAQDLFFEL 665
Query: 190 EKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQT 249
+ G+ + I +N+++ GF A ++ M+N + ++ +Y +DGL E +
Sbjct: 666 LEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRL 725
Query: 250 KKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW---YNKSGCGMNKAIFKLL 306
A +L EM SK I PD+ TF+ L+ G N+G LE A++ ++ + I+ L
Sbjct: 726 VFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTL 785
Query: 307 VPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVD 343
+ +G+L AF L + D ++++
Sbjct: 786 IAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILIN 822
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 118/253 (46%), Gaps = 4/253 (1%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRW-IEEILEHQK 84
S++ G KE N+ + +++ + G N YT + + R ++ E ++
Sbjct: 574 SIVDGFIKEGNIDSALAVYREMCEFG-VSPNVVTYTSLINGFCKSNRIDLALKTRDEMRE 632
Query: 85 QYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
+ ++ ++A LI + K E+A+ +F E+ + +N+++ + +
Sbjct: 633 KGLELDVTAYSA-LIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNME 691
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
+K + + I DL +Y T+I + +G L A+ L EM KGI D+ITF+ L
Sbjct: 692 AALVWYKKMIND-RIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVL 750
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+ G + G+ +A KI E M N+ P+V YN + G E K+A L EM + +
Sbjct: 751 VNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGL 810
Query: 265 NPDVFTFYALIKG 277
PD T+ LI G
Sbjct: 811 VPDDVTYDILING 823
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 117/253 (46%), Gaps = 38/253 (15%)
Query: 107 MFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSY 166
M R ++++M R + + ++ AC+ + +E + F++ + G++ D +Y
Sbjct: 200 MIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKER-GVKLDAGAY 258
Query: 167 NTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVN 226
+ II+A K + + LL EM+++G TF ++++ + G +A ++ E M+N
Sbjct: 259 SIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMIN 318
Query: 227 ----MNVR-------------------------------PNVRSYNARLDGLAIEKQTKK 251
MN+ PN +Y+ ++G +K
Sbjct: 319 CGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEK 378
Query: 252 ALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS-GCGM-NKAIFKLLVPF 309
A EL +M+ I P VF +L++G++ EEA + ++++ CG+ N + +++ +
Sbjct: 379 ASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSW 438
Query: 310 VCEKGDLDFAFNL 322
+C+ G +D A +L
Sbjct: 439 LCKGGKMDEACSL 451
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 105/238 (44%), Gaps = 4/238 (1%)
Query: 130 FNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEM 189
FN LL A + + + + F + + + P + N ++ A V + + L +M
Sbjct: 153 FNYLLNAYIRANRIENAIDCFNAMICQ-DVIPWVPYMNILLTALVRRNMIGELRDLYNKM 211
Query: 190 EKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQT 249
+GI D T + ++ GR +AE+ + V+ + +Y+ + + + +
Sbjct: 212 VLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNS 271
Query: 250 KKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS-GCG--MNKAIFKLL 306
LEL+ EM+ + P TF ++I V +GN+ EA R + CG MN + L
Sbjct: 272 NLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSL 331
Query: 307 VPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKTN 364
+ C +G+LD A NL + + ++ ++++ +E+A EL K N
Sbjct: 332 MKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLN 389
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 78/176 (44%), Gaps = 11/176 (6%)
Query: 196 LDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALEL 255
LD FN LL + R +A + M+ +V P V N L L + +L
Sbjct: 148 LDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDL 207
Query: 256 VGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS---GCGMNKAIFKLLVPFVCE 312
+M + I D FT + +++ + EG +EEA+ ++ ++ G ++ + +++ VC+
Sbjct: 208 YNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCK 267
Query: 313 KGDLDFAFNLCKRTFSERCLVDQAPLQLVV------DRLAKELRVEEAKELVELGK 362
K + + L + + +A V+ + + LR++E E++ GK
Sbjct: 268 KPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKE--EMINCGK 321
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 53/103 (51%), Gaps = 1/103 (0%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A ++ EM + +++F+ L+ N + + + +++ K + P ++ YNT+I
Sbjct: 728 ASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRK-NMTPSVLIYNTLI 786
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
+ +G+L A TL EM +G+ D +T++ L+ G + R
Sbjct: 787 AGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKGDR 829
>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
Length = 991
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 125/285 (43%), Gaps = 7/285 (2%)
Query: 81 EHQKQYKDISKEGFTARLIAL------YGKAAMFENARKVFDEMPGRNCEQTVLSFNALL 134
E ++ + KEGFT ++ Y A F++A ++ ++M C+ + F L+
Sbjct: 375 EAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLI 434
Query: 135 GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGI 194
+ + + E L ++ G+ P++++Y +II + G +D A +L ME+ G
Sbjct: 435 NSLIKKDRLKEAKELLNEISAN-GLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGC 493
Query: 195 RLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALE 254
+ + T+N+L+ G + + A + M + PNV +Y L G E A
Sbjct: 494 QPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFR 553
Query: 255 LVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKAIFKLLVPFVCEKG 314
L M + PD + L G EEA + + G + K + L+ + G
Sbjct: 554 LFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAG 613
Query: 315 DLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ DFA L +R E C D +++ L K+ R+ EA +++
Sbjct: 614 NTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILD 658
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 152/340 (44%), Gaps = 46/340 (13%)
Query: 60 YTGTVQRLANAKRFR-WIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEM 118
YT +Q L +AK R + L ++ + FT LI+ K+ +AR +FD M
Sbjct: 256 YTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTF-LISGLCKSGRVGDARLLFDAM 314
Query: 119 PGRNCEQTVLSFNALLGACVNSKKFDEV-DGL-FKDLPHKLGIEPDLVSYNTIIKAFVDK 176
P +V+++NA++ V K + D L K+L K G PD +YNT+I D+
Sbjct: 315 PQNGVVPSVMTYNAMI---VGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQ 371
Query: 177 GSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSY 236
+ + A LL K+G ++TF L+ G+ +F DA ++ M++ + +++ +
Sbjct: 372 KT-EEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVF 430
Query: 237 NARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLE---EAKRWYNK 293
++ L + + K+A EL+ E+ + + P+V T+ ++I G+ G ++ E + +
Sbjct: 431 GKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMER 490
Query: 294 SGCG------------------MNKAIFKL-------LVPFV----------CEKGDLDF 318
GC ++KA+ L ++P V C++ D D
Sbjct: 491 DGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDN 550
Query: 319 AFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
AF L + D+ ++ D L K R EEA +
Sbjct: 551 AFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFI 590
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 116/264 (43%), Gaps = 5/264 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I Y K A + F + E + NAL+ + + + LF +P +
Sbjct: 189 MIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMP-LM 247
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G + + SY +I+ D + A L M++ G ++ F L+ G +GR DA
Sbjct: 248 GCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDA 307
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+++ M V P+V +YNA + G + + AL++ M +PD +T+ LI G
Sbjct: 308 RLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYG 367
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
++ EEA+ N K G F L+ C D A + + S +C +D
Sbjct: 368 LCDQKT-EEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLD 426
Query: 335 QAPLQLVVDRLAKELRVEEAKELV 358
+++ L K+ R++EAKEL+
Sbjct: 427 LQVFGKLINSLIKKDRLKEAKELL 450
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 68/135 (50%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ PD V+YNT+IK++ +G L +A+ + + G+ + T N L+LG+ G A
Sbjct: 178 GLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKA 237
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ M M + N SY + GL K +KAL L M+ +P+V F LI G
Sbjct: 238 CWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISG 297
Query: 278 FVNEGNLEEAKRWYN 292
G + +A+ ++
Sbjct: 298 LCKSGRVGDARLLFD 312
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 92/227 (40%), Gaps = 7/227 (3%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
F+NA ++F+ M + ++ L A + + +E + G+ V Y
Sbjct: 548 FDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIV----RKGVALTKVYYT 603
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
T+I F G+ D A TL+ M +G D T++ LL R +A I + M
Sbjct: 604 TLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLR 663
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
++ + +Y +D + E + A + EM S P T+ I + EG LE+A
Sbjct: 664 GIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDA 723
Query: 288 KRW---YNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERC 331
+ + G + + +L+ G +D AF+ KR C
Sbjct: 724 EDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASC 770
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 122/304 (40%), Gaps = 38/304 (12%)
Query: 76 IEEIL-----EHQKQ-YKDISKEGFTAR------LIALYGKAAMFENARKVFDEMPGRNC 123
I+E+L +H K+ Y +++ G I Y K E+A + +M
Sbjct: 676 IDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGV 735
Query: 124 EQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLG--IEPDLVSYNTIIKAFVDKGSL-- 179
V+++N L+ C +D F L +G EP+ +Y ++K + KG+L
Sbjct: 736 APDVVTYNILIDGC---GHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLL-KGNLAY 791
Query: 180 ---------------DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
D LL M K G+ + T+++L+ GF GR +A + + M
Sbjct: 792 VRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHM 851
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
+ PN Y + K +KAL V M P + ++ L+ G NEG+
Sbjct: 852 CGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDF 911
Query: 285 EEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLV 341
E+ K + + G ++ +K+L + + G +D F + C + LV
Sbjct: 912 EKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKRYCCISSQTYALV 971
Query: 342 VDRL 345
+++
Sbjct: 972 TNKM 975
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 80/165 (48%), Gaps = 6/165 (3%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G PD +Y+ ++ A + L+ A +L +M +GI+ + + L+ G+ A
Sbjct: 629 GCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHA 688
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++++ M + +P+ +Y ++ E + + A +L+ +M + + PDV T+ LI G
Sbjct: 689 KRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDG 748
Query: 278 FVNEGNLEEA----KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDF 318
+ G ++ A KR S C N + LL+ + KG+L +
Sbjct: 749 CGHMGYIDRAFSTLKRMVGAS-CEPNYWTYCLLLKHLL-KGNLAY 791
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 38/202 (18%), Positives = 79/202 (39%), Gaps = 15/202 (7%)
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT 203
D + + + +L + P YN +++ + + ++ + G+ D +T+NT
Sbjct: 131 DAIQAIRRTGSARLALSPK--CYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNT 188
Query: 204 LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
++ + G A + + ++ + P + NA + G + +KA L M
Sbjct: 189 MIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMG 248
Query: 264 INPDVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAF 320
+ +++ LI+G + + +A + + GC N F L+ +C+ G
Sbjct: 249 CQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSG------ 302
Query: 321 NLCKRTFSERCLVDQAPLQLVV 342
R R L D P VV
Sbjct: 303 ----RVGDARLLFDAMPQNGVV 320
>gi|255660870|gb|ACU25604.1| pentatricopeptide repeat-containing protein [Verbena halei]
Length = 476
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 142/320 (44%), Gaps = 34/320 (10%)
Query: 73 FRWIEE--ILEHQKQYK---------------------DISKEGFT------ARLIALYG 103
FRW+E + EH ++ D+ K+G +I YG
Sbjct: 24 FRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYG 83
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K + + + K+F +M E+T+ S+NAL + ++ F + + GIEP
Sbjct: 84 KEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMGKRYFNKMLSE-GIEPTR 142
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
++N +I F G +++A +M+ + I D++T+NT++ G+Y + +AEK +
Sbjct: 143 HTFNVMIWGFFLSGKVETAIRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVE 202
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M N+ P V +Y + G Q AL LV EM+ P+ T+ L+ G N
Sbjct: 203 MKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGTKPNAITYSTLLPGLCNAEK 262
Query: 284 LEEA----KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQ 339
+ EA K +K + +IF L+ C+ G+LD A ++ K +
Sbjct: 263 MSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYG 322
Query: 340 LVVDRLAKELRVEEAKELVE 359
L+++ K + ++A +L++
Sbjct: 323 LLIENFCKAGQYDKAVKLLD 342
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 98/234 (41%), Gaps = 46/234 (19%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I Y + E A K F EM GRN E TV+++ L+ V+ + D+ L +++
Sbjct: 183 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMK-GF 241
Query: 158 GIEPDLVSYNT----------------IIKAFVDK--------------------GSLDS 181
G +P+ ++Y+T I+K +DK G+LD+
Sbjct: 242 GTKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDA 301
Query: 182 ANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV--RPNV------ 233
A +L M + + + + L+ F G++ A K+ + ++ ++ RP
Sbjct: 302 AADVLKAMIRLSVPTEAGHYGLLIENFCKAGQYDKAVKLLDKLIEKDIMLRPQSTLHLEP 361
Query: 234 RSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
++N ++ L Q KA LV ++ + D LI+G EG+ + A
Sbjct: 362 SAHNPMIEYLCNNGQASKAETLVRQLMKLGVQ-DPTALNTLIRGHSQEGSPDSA 414
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 42/215 (19%), Positives = 93/215 (43%), Gaps = 17/215 (7%)
Query: 37 LKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTA 96
LK ++DK+ +D I+ + + ++L+ + ++ G
Sbjct: 270 LKEMMDKYLAPTD-------NSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYG 322
Query: 97 RLIALYGKAAMFENARKVFDEM--------PGRNCEQTVLSFNALLGACVNSKKFDEVDG 148
LI + KA ++ A K+ D++ P + N ++ N+ + + +
Sbjct: 323 LLIENFCKAGQYDKAVKLLDKLIEKDIMLRPQSTLHLEPSAHNPMIEYLCNNGQASKAET 382
Query: 149 LFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
L + L KLG++ D + NT+I+ +GS DSA LL M ++ + + +N+L+ +
Sbjct: 383 LVRQL-MKLGVQ-DPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYNSLVQSY 440
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
DA+ ++M+ + P+ + + ++ L
Sbjct: 441 LKKNEPXDAKAALDSMIENDHLPDSALFRSVMESL 475
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 93/235 (39%), Gaps = 13/235 (5%)
Query: 54 RTNTGIYTGTVQRLANAKRFRWIEEIL-EHQKQYKDISKEGFTARLIALYGKAAMFENAR 112
+ N Y+ + L NA++ IL E +Y + RLI+ + K+ + A
Sbjct: 244 KPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAA 303
Query: 113 KVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHK---------LGIEPDL 163
V M + + L+ + ++D+ L L K L +EP
Sbjct: 304 DVLKAMIRLSVPTEAGHYGLLIENFCKAGQYDKAVKLLDKLIEKDIMLRPQSTLHLEPS- 362
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
++N +I+ + G A TL+ ++ K G++ D NTL+ G G A ++ +
Sbjct: 363 -AHNPMIEYLCNNGQASKAETLVRQLMKLGVQ-DPTALNTLIRGHSQEGSPDSAFELLKI 420
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGF 278
M+ V +YN+ + + + A + M + PD F ++++
Sbjct: 421 MLRRKVDSEKSAYNSLVQSYLKKNEPXDAKAALDSMIENDHLPDSALFRSVMESL 475
>gi|297724885|ref|NP_001174806.1| Os06g0499301 [Oryza sativa Japonica Group]
gi|52076487|dbj|BAD45366.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|125597333|gb|EAZ37113.1| hypothetical protein OsJ_21452 [Oryza sativa Japonica Group]
gi|255677074|dbj|BAH93534.1| Os06g0499301 [Oryza sativa Japonica Group]
Length = 642
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 129/278 (46%), Gaps = 5/278 (1%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMP 119
Y+ V LA+A R ++ ++ E F L A+ +A + A K+F M
Sbjct: 212 YSTVVSALADAGRVDDAVALVHEMVADGVVAAEAFNPVLRAML-RAGDVKGAAKLFGFMQ 270
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL 179
+ C T ++N L+ + + G+ + + + G+ P +++Y ++ V G +
Sbjct: 271 LKGCVPTTATYNVLVHGLLVCGRAGAAMGVMRRM-EREGVVPGVMTYGAVVDGLVRCGRV 329
Query: 180 DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNAR 239
A + EME+ G+ + ++T++ GF +G A K+WE MV VRPNV Y+A
Sbjct: 330 KDAWKVAEEMERNGLAWNEFVYSTVITGFCKSGEIDCALKVWEAMVASPVRPNVVLYSAM 389
Query: 240 LDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGC 296
+ GLA + +A L EM + P++ T+ ++I+G+ G+ A + + +GC
Sbjct: 390 IGGLANFGKMTEAELLFREMIHSKCAPNIITYGSIIQGYFKIGDTSRALSVWEEMIGAGC 449
Query: 297 GMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
N + +L+ +C G L A + K C D
Sbjct: 450 VPNAVSYSILINGLCNVGRLKDAMMVWKHMLDRGCAPD 487
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 101/217 (46%), Gaps = 18/217 (8%)
Query: 119 PGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL--------GIEPDLVSYNTII 170
PGR T+LSFN LL CV S G + D+ ++ + PD +Y+T++
Sbjct: 159 PGR-LAPTLLSFNLLL-KCVCSSLVPRDPGRYLDVALRILHEIIPGWDLAPDKFTYSTVV 216
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
A D G +D A L++EM G+ + FN +L G A K++ M
Sbjct: 217 SALADAGRVDDAVALVHEMVADGV-VAAEAFNPVLRAMLRAGDVKGAAKLFGFMQLKGCV 275
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
P +YN + GL + + A+ ++ M + + P V T+ A++ G V G +++A W
Sbjct: 276 PTTATYNVLVHGLLVCGRAGAAMGVMRRMEREGVVPGVMTYGAVVDGLVRCGRVKDA--W 333
Query: 291 -----YNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
++G N+ ++ ++ C+ G++D A +
Sbjct: 334 KVAEEMERNGLAWNEFVYSTVITGFCKSGEIDCALKV 370
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 107/255 (41%), Gaps = 37/255 (14%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMP 119
Y V L R + ++ E ++ E + +I + K+ + A KV++ M
Sbjct: 316 YGAVVDGLVRCGRVKDAWKVAEEMERNGLAWNEFVYSTVITGFCKSGEIDCALKVWEAMV 375
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL 179
V+ ++A++G N K E + LF+++ H P++++Y +II+ + G
Sbjct: 376 ASPVRPNVVLYSAMIGGLANFGKMTEAELLFREMIHS-KCAPNIITYGSIIQGYFKIGDT 434
Query: 180 DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM------------ 227
A ++ EM G + ++++ L+ G + GR DA +W+ M++
Sbjct: 435 SRALSVWEEMIGAGCVPNAVSYSILINGLCNVGRLKDAMMVWKHMLDRGCAPDTIAYTSM 494
Query: 228 ------------------------NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
+ P+V SYN LDGL + K +A++L+ M +
Sbjct: 495 IKGLCVSGMVDGGLRLFYDMLASGHADPDVISYNVLLDGLLLAKDLPRAMDLLNRMLDQG 554
Query: 264 INPDVFTFYALIKGF 278
+PD T ++ F
Sbjct: 555 CDPDTVTCNIFLREF 569
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 104/231 (45%), Gaps = 13/231 (5%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSK--KFDEVDGLFKDLPHKLG--IEPDLV 164
++A KV +EM E+ L++N + + V + K E+D K + + P++V
Sbjct: 330 KDAWKVAEEM-----ERNGLAWNEFVYSTVITGFCKSGEIDCALKVWEAMVASPVRPNVV 384
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
Y+ +I + G + A L EM ++IT+ +++ G++ G + A +WE M
Sbjct: 385 LYSAMIGGLANFGKMTEAELLFREMIHSKCAPNIITYGSIIQGYFKIGDTSRALSVWEEM 444
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
+ PN SY+ ++GL + K A+ + M + PD + ++IKG G +
Sbjct: 445 IGAGCVPNAVSYSILINGLCNVGRLKDAMMVWKHMLDRGCAPDTIAYTSMIKGLCVSGMV 504
Query: 285 EEAKRWYN---KSGCGMNKAI-FKLLVPFVCEKGDLDFAFNLCKRTFSERC 331
+ R + SG I + +L+ + DL A +L R + C
Sbjct: 505 DGGLRLFYDMLASGHADPDVISYNVLLDGLLLAKDLPRAMDLLNRMLDQGC 555
Score = 44.3 bits (103), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 8/110 (7%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDG---LFKDLPHKLGIEPDL 163
++A V+ M R C +++ +++ G CV+ VDG LF D+ +PD+
Sbjct: 469 LKDAMMVWKHMLDRGCAPDTIAYTSMIKGLCVSGM----VDGGLRLFYDMLASGHADPDV 524
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
+SYN ++ + L A LL M +G D +T N L F + R
Sbjct: 525 ISYNVLLDGLLLAKDLPRAMDLLNRMLDQGCDPDTVTCNIFLREFGAGER 574
>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 145/289 (50%), Gaps = 12/289 (4%)
Query: 82 HQKQYKDISKEGFTAR--------LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNAL 133
HQ+ DIS+ + ++ K + A+++F+EM + +++S+N+L
Sbjct: 197 HQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSL 256
Query: 134 LGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKG 193
+ + K++E L ++ + G++PD+V++N +I +G + A LL M + G
Sbjct: 257 IHGFCCAGKWEESKRLLDEMLDQ-GLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESG 315
Query: 194 IRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKAL 253
I DL+T+N+L+ GF G A +++ +M + P+V SYN ++G + + ++A+
Sbjct: 316 IVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAM 375
Query: 254 ELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFV 310
+L EM P+V T+ +L+KG G +++AK+ ++ G N + + + +
Sbjct: 376 KLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGL 435
Query: 311 CEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
C+ L A L S ++ L ++D L K ++E A EL E
Sbjct: 436 CKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFE 484
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 109/227 (48%), Gaps = 10/227 (4%)
Query: 97 RLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHK 156
L++ K + ++++M + N LL N + E F + +
Sbjct: 74 HLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRR 133
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
G P++V+YNT+IK + + A L M+K G D++T+ TL+ G G
Sbjct: 134 -GYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINI 192
Query: 217 AEKIWETMVN------MNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
A K+ + M+N +N +PNV +YN +DGL + +A +L EM+++ + P + +
Sbjct: 193 ALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIIS 252
Query: 271 FYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKG 314
+ +LI GF G EE+KR ++ G + F +L+ +C++G
Sbjct: 253 YNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEG 299
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 160/378 (42%), Gaps = 44/378 (11%)
Query: 25 GSVIRGIYKENNLKRLVDKFKKS-SDLGRF----RTNTGIYTGTVQRLANAKRFRWIEEI 79
G++I+G+ N+ + ++ +D+ R+ + N Y V L R +++
Sbjct: 178 GTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQL 237
Query: 80 LEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL----- 134
E K I LI + A +E ++++ DEM + + +++FN L+
Sbjct: 238 FEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCK 297
Query: 135 -GACVNSKKF-----------------DEVDG------------LFKDLPHKLGIEPDLV 164
G + +KK ++G LF +P K G EPD++
Sbjct: 298 EGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSK-GCEPDVI 356
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
SYN +I + ++ A L EM G R ++IT+++LL G + G+ DA+K++ M
Sbjct: 357 SYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVM 416
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
+ N +Y LDGL +A++L E++S ++ LI G G L
Sbjct: 417 KAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKL 476
Query: 285 EEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLV 341
E A + K G N + +++ C +G +D A L ++ + C D +
Sbjct: 477 ETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTL 536
Query: 342 VDRLAKELRVEEAKELVE 359
+ + ++EE +L+
Sbjct: 537 MRGFYESNKLEEVVQLLH 554
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 84/151 (55%), Gaps = 2/151 (1%)
Query: 106 AMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVS 165
+FE A K+F E+ N + + + N L+ + K + LF+ L ++ G EP++V+
Sbjct: 440 CLFE-AMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNE-GHEPNVVT 497
Query: 166 YNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMV 225
Y +I F +G +D AN L+ +ME G D+IT+NTL+ GFY + + + ++ M
Sbjct: 498 YTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMA 557
Query: 226 NMNVRPNVRSYNARLDGLAIEKQTKKALELV 256
+V P+ + + +D L+ +++ ++ L L+
Sbjct: 558 QKDVSPDAITCSIVVDMLSKDEKYQECLHLL 588
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 73/178 (41%), Gaps = 13/178 (7%)
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
P L S+N ++ +L +M G+ D T N LL + R +
Sbjct: 67 PSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAA 126
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
+ ++ PN+ +YN + GL +E + +A L M+ PDV T+ LIKG
Sbjct: 127 FAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCG 186
Query: 281 EGNLEEAKRWYNKS---------GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSE 329
GN+ A + + + C N + ++V +C+ G D A K+ F E
Sbjct: 187 TGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEA----KQLFEE 240
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/233 (20%), Positives = 89/233 (38%), Gaps = 71/233 (30%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
+AR++F MP + CE V+S+N L+ + K +E L+ ++ +G P++++Y+
Sbjct: 336 LNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEML-LVGKRPNVITYD 394
Query: 168 TIIKAFVDKGSLDSA--------------NTLLY---------------------EMEKK 192
+++K G +D A N+ Y E++
Sbjct: 395 SLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSS 454
Query: 193 GIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKA 252
+L++ N L+ G G+ A +++E + N PNV +Y + G E Q KA
Sbjct: 455 NFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKA 514
Query: 253 -----------------------------------LELVGEMRSKEINPDVFT 270
++L+ M K+++PD T
Sbjct: 515 NVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAIT 567
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 76/175 (43%), Gaps = 9/175 (5%)
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
L +FN LL G ++ ++ M + + + N L+ L + ++
Sbjct: 69 LSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFA 128
Query: 258 EMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKG 314
+ + +P++ T+ LIKG E + EA R + K GC + + L+ +C G
Sbjct: 129 GILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTG 188
Query: 315 DLDFAFNLCKRTFSE------RCLVDQAPLQLVVDRLAKELRVEEAKELVELGKT 363
+++ A L + ++ C + ++VD L K R +EAK+L E KT
Sbjct: 189 NINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKT 243
>gi|255660834|gb|ACU25586.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
Length = 418
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 146/317 (46%), Gaps = 24/317 (7%)
Query: 66 RLANAKRFR----WIEEILEHQKQ----------YKDISKEGFTARL------IALYGKA 105
RL +FR ++LEH + YK+I + G+ A L + + K
Sbjct: 90 RLTREHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKE 149
Query: 106 AMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVS 165
++ VFD + +V+SFN L+ + D+ L K H G++PD+ +
Sbjct: 150 GEIRLSQSVFDAIRKWGLRPSVVSFNTLMNGYIRQGDLDKGFRL-KSAMHASGVQPDVYT 208
Query: 166 YNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMV 225
Y+ +I + +D AN L EM KG+ + +TF TL+ G NG+ A +I++ M+
Sbjct: 209 YSVLINGLCKESKMDEANELFXEMLDKGLVPNGVTFTTLIDGHCKNGKVDLAMEIYKQML 268
Query: 226 NMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLE 285
+ ++ P++ +YN + GL + K+A L+ EM K + PD T+ LI G +G+LE
Sbjct: 269 SQSLSPDLITYNTLIYGLCKKGDLKQARNLINEMSMKGLKPDKITYTTLIDGSCKDGDLE 328
Query: 286 EAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVV 342
A + + ++ + L+ +C++G A + + S D +++
Sbjct: 329 TAFEYRKRMIEENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDSGTYTMII 388
Query: 343 DRLAKELRVEEAKELVE 359
+ K+ V +L++
Sbjct: 389 NEFCKKGDVWTGSKLLK 405
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 82/173 (47%), Gaps = 1/173 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K + A +++ +M ++ ++++N L+ + L ++ K
Sbjct: 247 LIDGHCKNGKVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQARNLINEMSMK- 305
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD ++Y T+I G L++A M ++ IRLD + + L+ G GR DA
Sbjct: 306 GLKPDKITYTTLIDGSCKDGDLETAFEYRKRMIEENIRLDDVAYTALISGLCQEGRSVDA 365
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
EK+ M+++ ++P+ +Y ++ + +L+ EM+ P V T
Sbjct: 366 EKMLREMLSVGLKPDSGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVT 418
>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
Length = 703
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 125/271 (46%), Gaps = 45/271 (16%)
Query: 95 TARLIAL--YGKAAMFENARKVFDEMPG-RNCEQTVLSFNALLGACVNSKKFDEVDGLFK 151
+A L+ L + +A M + A F +P C + S NALL A V +++F + D F
Sbjct: 84 SAALVVLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFA 143
Query: 152 DLPH-KLG--IEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
L H G I P+L +YN ++++ +G LD A TL + ++ + D IT++TL+ G
Sbjct: 144 SLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGL 203
Query: 209 -----------------------------------YSNGRFADAEKIWETMV-NMNVRPN 232
+ G F ++W+ +V + RPN
Sbjct: 204 AKQDRLDHALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPN 263
Query: 233 VRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN 292
+ +YN LDGL + K+ E+ M + + PDV T+ LI G G+++ A R Y+
Sbjct: 264 LATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYS 323
Query: 293 ---KSGCGMNKAIFKLLVPFVCEKGDLDFAF 320
K+G ++ A++ LV C+ G + A+
Sbjct: 324 EIIKTGLVIDAAMYNSLVKGFCQAGRVQEAW 354
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 125/269 (46%), Gaps = 19/269 (7%)
Query: 26 SVIRGIYKENNLKRLVDKFK--KSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQ 83
S+I G+ N+ RLVD K + D + N+ IY + R +
Sbjct: 444 SMINGLC---NVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTS------DAV 494
Query: 84 KQYKDISKEGFTARLIAL------YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGAC 137
+ Y ++ G + +I KA ++ A V EM + ++ +L+
Sbjct: 495 RIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGL 554
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEM-EKKGIRL 196
+ KK D+ ++K + +K G++ D++ +N +I G +D A + +M EKK
Sbjct: 555 FSDKKIDDALSIWKQILYK-GLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPP 613
Query: 197 DLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELV 256
+L+T+NTL+ G Y G A +W ++ + P++ SYN R+ GL + + ++L+
Sbjct: 614 NLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLL 673
Query: 257 GEMRSKEINPDVFTFYALIKGFVNEGNLE 285
E+ S+ I P V T+ L++ + G ++
Sbjct: 674 DEVLSRGIIPTVITWNILVRAVIKYGPIQ 702
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 139/350 (39%), Gaps = 79/350 (22%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEV----DGLFKDL 153
L+ K ++A + DEMP + V+ +NALLG C + +F++V D L KD
Sbjct: 199 LMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDP 258
Query: 154 ---PH------------KLG----------------IEPDLVSYNTIIKAFVDKGSLDSA 182
P+ K G ++PD+++Y +I G +D A
Sbjct: 259 GARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGA 318
Query: 183 NTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDG 242
+ E+ K G+ +D +N+L+ GF GR +A K W++ +R N+R+YN + G
Sbjct: 319 ARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKG 377
Query: 243 L--------AIEKQ----------------------------TKKALELVGEMRSKEINP 266
L AIE KA + E R
Sbjct: 378 LFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQL 437
Query: 267 DVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLC 323
DVF++ ++I G N G L +A + Y +K GC N I+ L+ C+ A +
Sbjct: 438 DVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIY 497
Query: 324 KRTFSERCLVDQAPLQLVVDRLAKELRVEE----AKELVELGKTNSYCRY 369
+ C ++D L K + +E A+E+VE G T Y
Sbjct: 498 SKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTY 547
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 125/266 (46%), Gaps = 7/266 (2%)
Query: 25 GSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQK 84
G++I G+ + + F+++ G+ + + Y+ + L N R ++ + ++K
Sbjct: 408 GTLIHGLCQNGFANKAFTIFEEARVSGK-QLDVFSYSSMINGLCNVGRL--VDAVKVYEK 464
Query: 85 QYKDISKEG--FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKK 142
KD K LI+ + + +A +++ +M C TV+++N L+ ++K
Sbjct: 465 MDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEK 524
Query: 143 FDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFN 202
+ E + +++ G PD+ +Y ++I+ +D A ++ ++ KG+++D++ N
Sbjct: 525 YQEASSVAREMVEN-GFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHN 583
Query: 203 TLLLGFYSNGRFADAEKIWETMVNM-NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS 261
L+ G S G+ +A ++ M N PN+ +YN +DGL KA L +
Sbjct: 584 ILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITE 643
Query: 262 KEINPDVFTFYALIKGFVNEGNLEEA 287
+ PD+ ++ IKG + + E
Sbjct: 644 DGLEPDIISYNTRIKGLCSCDRIHEG 669
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 127/297 (42%), Gaps = 10/297 (3%)
Query: 84 KQYKDISKEGFTA------RLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGAC 137
+ Y +I K G L+ + +A + A K +D G + + ++N ++
Sbjct: 320 RVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSA-GFAGLRNLRTYNIMIKGL 378
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLD 197
+S DE L+ L + PD V++ T+I G + A T+ E G +LD
Sbjct: 379 FDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLD 438
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
+ ++++++ G + GR DA K++E M +PN YNA + G +T A+ +
Sbjct: 439 VFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYS 498
Query: 258 EMRSKEINPDVFTFYALIKGFVNEGNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKG 314
+M +P V T+ LI G +EA R ++G + + L+ +
Sbjct: 499 KMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDK 558
Query: 315 DLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKTNSYCRYNL 371
+D A ++ K+ + VD +++ L +V+EA + K C NL
Sbjct: 559 KIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNL 615
>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Vitis vinifera]
Length = 877
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 167/354 (47%), Gaps = 14/354 (3%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
S+++G + NL ++ F K ++ G F N Y+ ++ N+ E L Q +
Sbjct: 370 SLMKGYCAQGNLDSALNLFNKITEDGLF-PNKVTYSVLIEGCCNSGNIEKASE-LYTQMK 427
Query: 86 YKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCE-QTVLSFNALLGACVNSKKF 143
I F L+ Y KA ++E A K+FDE +C + ++N ++ K
Sbjct: 428 LNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDE--AVDCGVANIFTYNIMMSWLCKGGKM 485
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT 203
DE L ++ ++ G+ P++VSYN +I KG++D A+++ +M + ++ +++T++
Sbjct: 486 DEACSLLDNMVNQ-GMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSI 544
Query: 204 LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
L+ G + G A +++ M+++N+ P ++N ++GL Q +A + + +
Sbjct: 545 LIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEG 604
Query: 264 INPDVFTFYALIKGFVNEGNLEEAKRWYNKS---GCGMNKAIFKLLVPFVCEKGDLDFAF 320
P T+ +++ GF+ EGN++ A Y + G N + L+ C+ +D A
Sbjct: 605 FIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLAL 664
Query: 321 NLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAK----ELVELGKTNSYCRYN 370
+ +D ++D K +E A+ EL+E+G + + YN
Sbjct: 665 KTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYN 718
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 130/277 (46%), Gaps = 10/277 (3%)
Query: 76 IEEILEHQKQYKDISKEGFTAR------LIALYGKAAMFENARKVFDEMPGRNCEQTVLS 129
+ ++ E + + K+ +EGF ++ + K ++A V+ EM V++
Sbjct: 587 VGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVT 646
Query: 130 FNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEM 189
+ +L+ S + D ++ K G+E D+ +Y+ +I F + ++SA L +E+
Sbjct: 647 YTSLINGFCKSNRIDLALKTRDEMREK-GLELDVTAYSALIDGFCKRRDMESAQDLFFEL 705
Query: 190 EKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQT 249
+ G+ + I +N+++ GF A ++ M+N + ++ +Y +DGL E +
Sbjct: 706 LEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRL 765
Query: 250 KKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW---YNKSGCGMNKAIFKLL 306
A +L EM SK I PD+ TF+ L+ G N+G LE A++ ++ + I+ L
Sbjct: 766 VFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTL 825
Query: 307 VPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVD 343
+ +G+L AF L + D ++++
Sbjct: 826 IAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILIN 862
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 118/253 (46%), Gaps = 4/253 (1%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRW-IEEILEHQK 84
S++ G KE N+ + +++ + G N YT + + R ++ E ++
Sbjct: 614 SIVDGFIKEGNIDSALAVYREMCEFG-VSPNVVTYTSLINGFCKSNRIDLALKTRDEMRE 672
Query: 85 QYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
+ ++ ++A LI + K E+A+ +F E+ + +N+++ + +
Sbjct: 673 KGLELDVTAYSA-LIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNME 731
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
+K + + I DL +Y T+I + +G L A+ L EM KGI D+ITF+ L
Sbjct: 732 AALVWYKKMIND-RIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVL 790
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+ G + G+ +A KI E M N+ P+V YN + G E K+A L EM + +
Sbjct: 791 VNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGL 850
Query: 265 NPDVFTFYALIKG 277
PD T+ LI G
Sbjct: 851 VPDDVTYDILING 863
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 117/253 (46%), Gaps = 38/253 (15%)
Query: 107 MFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSY 166
M R ++++M R + + ++ AC+ + +E + F++ + G++ D +Y
Sbjct: 240 MIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKER-GVKLDAGAY 298
Query: 167 NTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVN 226
+ II+A K + + LL EM+++G TF ++++ + G +A ++ E M+N
Sbjct: 299 SIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMIN 358
Query: 227 ----MNVR-------------------------------PNVRSYNARLDGLAIEKQTKK 251
MN+ PN +Y+ ++G +K
Sbjct: 359 CGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEK 418
Query: 252 ALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS-GCGM-NKAIFKLLVPF 309
A EL +M+ I P VF +L++G++ EEA + ++++ CG+ N + +++ +
Sbjct: 419 ASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSW 478
Query: 310 VCEKGDLDFAFNL 322
+C+ G +D A +L
Sbjct: 479 LCKGGKMDEACSL 491
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 105/238 (44%), Gaps = 4/238 (1%)
Query: 130 FNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEM 189
FN LL A + + + + F + + + P + N ++ A V + + L +M
Sbjct: 193 FNYLLNAYIRANRIENAIDCFNAMICQ-DVIPWVPYMNILLTALVRRNMIGELRDLYNKM 251
Query: 190 EKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQT 249
+GI D T + ++ GR +AE+ + V+ + +Y+ + + + +
Sbjct: 252 VLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNS 311
Query: 250 KKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS-GCG--MNKAIFKLL 306
LEL+ EM+ + P TF ++I V +GN+ EA R + CG MN + L
Sbjct: 312 NLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSL 371
Query: 307 VPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKTN 364
+ C +G+LD A NL + + ++ ++++ +E+A EL K N
Sbjct: 372 MKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLN 429
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 78/176 (44%), Gaps = 11/176 (6%)
Query: 196 LDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALEL 255
LD FN LL + R +A + M+ +V P V N L L + +L
Sbjct: 188 LDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDL 247
Query: 256 VGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS---GCGMNKAIFKLLVPFVCE 312
+M + I D FT + +++ + EG +EEA+ ++ ++ G ++ + +++ VC+
Sbjct: 248 YNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCK 307
Query: 313 KGDLDFAFNLCKRTFSERCLVDQAPLQLVV------DRLAKELRVEEAKELVELGK 362
K + + L + + +A V+ + + LR++E E++ GK
Sbjct: 308 KPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKE--EMINCGK 361
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 53/103 (51%), Gaps = 1/103 (0%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A ++ EM + +++F+ L+ N + + + +++ K + P ++ YNT+I
Sbjct: 768 ASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRK-NMTPSVLIYNTLI 826
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
+ +G+L A TL EM +G+ D +T++ L+ G + R
Sbjct: 827 AGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKGDR 869
>gi|357499971|ref|XP_003620274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495289|gb|AES76492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 498
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 121/251 (48%), Gaps = 4/251 (1%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A ++ + G+ + V+ +N ++ + K +E L+ ++ + GI PD+V+Y+ +I
Sbjct: 162 ALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSE-GISPDVVTYSALI 220
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
F G L A L +M + I+ D+ TFN L+ GF +G+ + + ++ M+ ++
Sbjct: 221 SGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIK 280
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
PNV +Y + +DG + KQ KA + M +NPD ++ +I GF ++EA
Sbjct: 281 PNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNL 340
Query: 291 YNKSGCG---MNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAK 347
+ K C N + L+ +C+ G + +A L D ++D L K
Sbjct: 341 FKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCK 400
Query: 348 ELRVEEAKELV 358
+V++A L+
Sbjct: 401 NHQVDKAIALL 411
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 100/204 (49%), Gaps = 9/204 (4%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+ + K + + VF M + + V+++ +L+ K+ ++ + +F +
Sbjct: 254 LVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQG- 312
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ PD SYN +I F +D A L +M K I +++T+ +L+ G +G+ + A
Sbjct: 313 GVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYA 372
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS--------KEINPDVF 269
K+ + M + V P++ +Y++ LD L Q KA+ L+ +++ K N DV+
Sbjct: 373 LKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVY 432
Query: 270 TFYALIKGFVNEGNLEEAKRWYNK 293
+ +I+GF +G EA +K
Sbjct: 433 AYTVMIQGFCVKGLFNEALALLSK 456
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 87/186 (46%), Gaps = 14/186 (7%)
Query: 121 RNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLD 180
+N + F +LG+ V + L + + K GI +LV+ N +I F G
Sbjct: 54 KNPTPPIFEFGKILGSLVKINCYHTAISLHRQMELK-GIASNLVTLNILINCFSQLGQNP 112
Query: 181 SANTLLYEMEKKGIRLDLITFNTLLLGF--------YSNG--RFADAEKIWETMVNMN-- 228
+ ++ + KKG ++IT TL+ G NG + A + + ++
Sbjct: 113 LSFSVFANILKKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQARAALQLLRRVDGK 172
Query: 229 -VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
V+PNV YN +D + K +A +L EM S+ I+PDV T+ ALI GF G L++A
Sbjct: 173 LVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDA 232
Query: 288 KRWYNK 293
+NK
Sbjct: 233 IDLFNK 238
>gi|255660830|gb|ACU25584.1| pentatricopeptide repeat-containing protein [Xeroaloysia
ovatifolia]
Length = 418
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 133/273 (48%), Gaps = 26/273 (9%)
Query: 66 RLANAKRFRWI-----EEILEHQKQ----------YKDISKEGFTARL------IALYGK 104
RL +F W+ ++LEH + Y++I + G+ A L + + K
Sbjct: 90 RLTREHKF-WVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHKFCK 148
Query: 105 AAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLV 164
A+ VF+ + +V+SFN L+ + DE L K H G++PD+
Sbjct: 149 DGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRL-KTAMHASGVQPDVY 207
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
+Y+ +I + +D AN L EM KG+ + +TF TL+ G NGR A +I++ M
Sbjct: 208 TYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 267
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
++ ++ P++ +YN + GL + K+A +L+ EM K + PD T+ LI G EG+L
Sbjct: 268 LSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDEMSMKGLKPDKITYTTLIDGXCKEGDL 327
Query: 285 E---EAKRWYNKSGCGMNKAIFKLLVPFVCEKG 314
E E ++ + ++ + L+ +C++G
Sbjct: 328 ETAFEHRKRMIQENIQLDDVGYTALISGLCQEG 360
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 84/173 (48%), Gaps = 1/173 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K + A +++ +M ++ ++++N L+ + L ++ K
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDEMSMK- 305
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD ++Y T+I +G L++A M ++ I+LD + + L+ G GR+ DA
Sbjct: 306 GLKPDKITYTTLIDGXCKEGDLETAFEHRKRMIQENIQLDDVGYTALISGLCQEGRYLDA 365
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
EK+ M+++ ++P+ +Y ++ + +L+ EM+ P V T
Sbjct: 366 EKVLREMLSVGLKPDTITYTMIINEFCKKGDVWTGSKLLKEMQRDGQMPSVVT 418
>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
Length = 876
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 125/285 (43%), Gaps = 7/285 (2%)
Query: 81 EHQKQYKDISKEGFTARLIAL------YGKAAMFENARKVFDEMPGRNCEQTVLSFNALL 134
E ++ + KEGFT ++ Y A F++A ++ ++M C+ + F L+
Sbjct: 260 EAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLI 319
Query: 135 GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGI 194
+ + + E L ++ G+ P++++Y +II + G +D A +L ME+ G
Sbjct: 320 NSLIKKDRLKEAKELLNEISAN-GLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGC 378
Query: 195 RLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALE 254
+ + T+N+L+ G + + A + M + PNV +Y L G E A
Sbjct: 379 QPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFR 438
Query: 255 LVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKAIFKLLVPFVCEKG 314
L M + PD + L G EEA + + G + K + L+ + G
Sbjct: 439 LFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAG 498
Query: 315 DLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ DFA L +R E C D +++ L K+ R+ EA +++
Sbjct: 499 NTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILD 543
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 152/340 (44%), Gaps = 46/340 (13%)
Query: 60 YTGTVQRLANAKRFR-WIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEM 118
YT +Q L +AK R + L ++ + FT LI+ K+ +AR +FD M
Sbjct: 141 YTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTF-LISGLCKSGRVGDARLLFDAM 199
Query: 119 PGRNCEQTVLSFNALLGACVNSKKFDEV-DGL-FKDLPHKLGIEPDLVSYNTIIKAFVDK 176
P +V+++NA++ V K + D L K+L K G PD +YNT+I D+
Sbjct: 200 PQNGVVPSVMTYNAMI---VGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQ 256
Query: 177 GSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSY 236
+ + A LL K+G ++TF L+ G+ +F DA ++ M++ + +++ +
Sbjct: 257 KT-EEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVF 315
Query: 237 NARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLE---EAKRWYNK 293
++ L + + K+A EL+ E+ + + P+V T+ ++I G+ G ++ E + +
Sbjct: 316 GKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMER 375
Query: 294 SGCG------------------MNKAIFKL-------LVPFV----------CEKGDLDF 318
GC ++KA+ L ++P V C++ D D
Sbjct: 376 DGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDN 435
Query: 319 AFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
AF L + D+ ++ D L K R EEA +
Sbjct: 436 AFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFI 475
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 116/264 (43%), Gaps = 5/264 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I Y K A + F + E + NAL+ + + + LF +P +
Sbjct: 74 MIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMP-LM 132
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G + + SY +I+ D + A L M++ G ++ F L+ G +GR DA
Sbjct: 133 GCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDA 192
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+++ M V P+V +YNA + G + + AL++ M +PD +T+ LI G
Sbjct: 193 RLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYG 252
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
++ EEA+ N K G F L+ C D A + + S +C +D
Sbjct: 253 LCDQKT-EEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLD 311
Query: 335 QAPLQLVVDRLAKELRVEEAKELV 358
+++ L K+ R++EAKEL+
Sbjct: 312 LQVFGKLINSLIKKDRLKEAKELL 335
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 68/135 (50%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ PD V+YNT+IK++ +G L +A+ + + G+ + T N L+LG+ G A
Sbjct: 63 GLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKA 122
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ M M + N SY + GL K +KAL L M+ +P+V F LI G
Sbjct: 123 CWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISG 182
Query: 278 FVNEGNLEEAKRWYN 292
G + +A+ ++
Sbjct: 183 LCKSGRVGDARLLFD 197
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 92/227 (40%), Gaps = 7/227 (3%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
F+NA ++F+ M + ++ L A + + +E + G+ V Y
Sbjct: 433 FDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIV----RKGVALTKVYYT 488
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
T+I F G+ D A TL+ M +G D T++ LL R +A I + M
Sbjct: 489 TLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLR 548
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
++ + +Y +D + E + A + EM S P T+ I + EG LE+A
Sbjct: 549 GIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDA 608
Query: 288 KRW---YNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERC 331
+ + G + + +L+ G +D AF+ KR C
Sbjct: 609 EDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASC 655
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 107/266 (40%), Gaps = 26/266 (9%)
Query: 102 YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLG--I 159
Y K E+A + +M V+++N L+ C +D F L +G
Sbjct: 599 YCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGC---GHMGYIDRAFSTLKRMVGASC 655
Query: 160 EPDLVSYNTIIKAFVDKGSL-----------------DSANTLLYEMEKKGIRLDLITFN 202
EP+ +Y ++K + KG+L D LL M K G+ + T++
Sbjct: 656 EPNYWTYCLLLKHLL-KGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYS 714
Query: 203 TLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
+L+ GF GR +A + + M + PN Y + K +KAL V M
Sbjct: 715 SLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSEC 774
Query: 263 EINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFA 319
P + ++ L+ G NEG+ E+ K + + G ++ +K+L + + G +D
Sbjct: 775 GFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDIC 834
Query: 320 FNLCKRTFSERCLVDQAPLQLVVDRL 345
F + C + LV +++
Sbjct: 835 FQMLSIMEKRYCCISSQTYALVTNKM 860
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 80/166 (48%), Gaps = 6/166 (3%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G PD +Y+ ++ A + L+ A +L +M +GI+ + + L+ G+ A
Sbjct: 514 GCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHA 573
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++++ M + +P+ +Y ++ E + + A +L+ +M + + PDV T+ LI G
Sbjct: 574 KRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDG 633
Query: 278 FVNEGNLEEA----KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFA 319
+ G ++ A KR S C N + LL+ + KG+L +
Sbjct: 634 CGHMGYIDRAFSTLKRMVGAS-CEPNYWTYCLLLKHLL-KGNLAYV 677
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 38/202 (18%), Positives = 79/202 (39%), Gaps = 15/202 (7%)
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT 203
D + + + +L + P YN +++ + + ++ + G+ D +T+NT
Sbjct: 16 DAIQAIRRTGSARLALSPK--CYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNT 73
Query: 204 LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
++ + G A + + ++ + P + NA + G + +KA L M
Sbjct: 74 MIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMG 133
Query: 264 INPDVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAF 320
+ +++ LI+G + + +A + + GC N F L+ +C+ G
Sbjct: 134 CQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSG------ 187
Query: 321 NLCKRTFSERCLVDQAPLQLVV 342
R R L D P VV
Sbjct: 188 ----RVGDARLLFDAMPQNGVV 205
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 51/117 (43%), Gaps = 1/117 (0%)
Query: 96 ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPH 155
+ LIA + KA E A + D M G+ + L+ C ++K F++ F +
Sbjct: 714 SSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALS-FVSIMS 772
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNG 212
+ G +P L SY ++ ++G + +L ++ + G D + + L G G
Sbjct: 773 ECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAG 829
>gi|255660934|gb|ACU25636.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
Length = 484
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 131/285 (45%), Gaps = 34/285 (11%)
Query: 73 FRWIEE--ILEHQKQYK---------------------DISKEGFT------ARLIALYG 103
FRW+E + EH ++ D+ K+G +I YG
Sbjct: 32 FRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDLWVLMIDSYG 91
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
KA + + + K+F +M E+T+ S++AL + ++ F + + GIEP
Sbjct: 92 KAGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRGRYMMAKRYFNKMLSE-GIEPTR 150
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
++N +I F G +++AN +M+ + I D+IT+NT++ G+Y + +AEK +
Sbjct: 151 HTFNVMIWGFFLCGKVETANRFFEDMKXREISPDVITYNTMINGYYRVKKIEEAEKYFVE 210
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M N+ P V +Y + G + AL L+ EM+ I P+ T+ L+ G N
Sbjct: 211 MKGRNIEPTVVTYTTLIKGYVSVDRVDDALTLLEEMKGFGIKPNAITYSTLLPGLCNAEK 270
Query: 284 LEEA----KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCK 324
+ EA K +K + +IF L+ C+ G+LD A ++ K
Sbjct: 271 MSEASGILKEMVDKYIAPKDNSIFLRLISGQCKAGNLDAAADVLK 315
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 86/198 (43%), Gaps = 9/198 (4%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI Y ++A + +EM G + ++++ LL N++K E G+ K++ K
Sbjct: 226 LIKGYVSVDRVDDALTLLEEMKGFGIKPNAITYSTLLPGLCNAEKMSEASGILKEMVDKY 285
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
D + +I G+LD+A +L M + + + + L+ + G + A
Sbjct: 286 IAPKDNSIFLRLISGQCKAGNLDAAADVLKAMIRLSVPTEAGHYGVLIENYCKAGDYEKA 345
Query: 218 EKIWETMVNMNV--RPNV------RSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVF 269
K+ + ++ ++ RP +YN ++ L QT KA LV ++ + D
Sbjct: 346 IKLLDKLIEKDIVLRPQSSLHMEPSAYNPLVEYLCNNGQTAKAETLVRQLMKLGVQ-DPT 404
Query: 270 TFYALIKGFVNEGNLEEA 287
LI+G EG+ + A
Sbjct: 405 ALNTLIRGHSQEGSPDSA 422
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 95/215 (44%), Gaps = 17/215 (7%)
Query: 37 LKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTA 96
LK +VDK+ D I+ + A ++L+ + ++ G
Sbjct: 278 LKEMVDKYIAPKD-------NSIFLRLISGQCKAGNLDAAADVLKAMIRLSVPTEAGHYG 330
Query: 97 RLIALYGKAAMFENARKVFDEM--------PGRNCEQTVLSFNALLGACVNSKKFDEVDG 148
LI Y KA +E A K+ D++ P + ++N L+ N+ + + +
Sbjct: 331 VLIENYCKAGDYEKAIKLLDKLIEKDIVLRPQSSLHMEPSAYNPLVEYLCNNGQTAKAET 390
Query: 149 LFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
L + L KLG++ D + NT+I+ +GS DSA LL M ++ I + ++++L+ +
Sbjct: 391 LVRQL-MKLGVQ-DPTALNTLIRGHSQEGSPDSAFELLKIMLRRKIDSEKSSYDSLVQSY 448
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
ADA+ ++M+ P+ + + ++ L
Sbjct: 449 LKKSEPADAKAALDSMIENGHLPDSSLFRSVMESL 483
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 40/199 (20%), Positives = 81/199 (40%), Gaps = 39/199 (19%)
Query: 128 LSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLY 187
L +N L G SKK + F+ + E + ++ II+ L+ A +L
Sbjct: 14 LVYNVLHG----SKKSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 188 EMEKKGIRLD-----------------------------------LITFNTLLLGFYSNG 212
+M KKG+ D + +++ L G
Sbjct: 70 DMPKKGLEWDEDLWVLMIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRG 129
Query: 213 RFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFY 272
R+ A++ + M++ + P ++N + G + + + A +M+ +EI+PDV T+
Sbjct: 130 RYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLCGKVETANRFFEDMKXREISPDVITYN 189
Query: 273 ALIKGFVNEGNLEEAKRWY 291
+I G+ +EEA++++
Sbjct: 190 TMINGYYRVKKIEEAEKYF 208
>gi|302765176|ref|XP_002966009.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
gi|300166823|gb|EFJ33429.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
Length = 413
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 147/353 (41%), Gaps = 8/353 (2%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I G K + R +D F++ G + N + V L R + +
Sbjct: 16 TLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEMLG 75
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
+ LI + M AR++ M V +++ L+ A + + +
Sbjct: 76 AGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMDALGKAGRAAK 135
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
+F ++ K G PD V YN +I +G +D A LL +M +KGI D T+N ++
Sbjct: 136 ALEVFSNM-QKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVI 194
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEIN 265
S GR+ A + M P+V +YN L+GL ++T +A +L EM++ +
Sbjct: 195 DVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCM 254
Query: 266 PDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
PD+ TF LI G +E+A K G N I+ L+ C G +D + L
Sbjct: 255 PDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNALISGFCRSGQVDKGYEL 314
Query: 323 CKRTFSERCLVDQAPLQLVV----DRLAKELRVEEAKELVELGKTNSYCRYNL 371
+ C D ++V R + +E +E+V G T + YN+
Sbjct: 315 FQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNV 367
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 77/166 (46%), Gaps = 1/166 (0%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
+ A +FDEM C + +F L+ + + ++ L K+G P+ YN
Sbjct: 239 DEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLV-KMGHVPNSYIYNA 297
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
+I F G +D L +M + D IT+ L+LGF G + A ++ + MV
Sbjct: 298 LISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREG 357
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYAL 274
P + +YN + L++ Q + A L EM +K NPD+ T+ AL
Sbjct: 358 HTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSAL 403
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 117/293 (39%), Gaps = 53/293 (18%)
Query: 122 NCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSY--------------- 166
+C V+++N L+ + D +F+ L + +P+ VS+
Sbjct: 6 DCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATD 65
Query: 167 --------------------NTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLL 206
NT+I G L A LL+ M LD+ T++ L+
Sbjct: 66 ALAVFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMD 125
Query: 207 GFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINP 266
GR A A +++ M P+ YN + L + + +ALEL+ +M K I P
Sbjct: 126 ALGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMP 185
Query: 267 DVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNK--------AIFKLLVPFVCEKGDLDF 318
D T+ +I + G E+A ++ GM K + L+ + + D
Sbjct: 186 DCRTYNIVIDVLSSCGRYEKAYSFF-----GMMKRRKHSPDVVTYNTLLNGLKKLRRTDE 240
Query: 319 AFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKE----LVELGKT-NSY 366
A +L + +C+ D ++D LAK R+E+A E LV++G NSY
Sbjct: 241 ACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSY 293
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 101/233 (43%), Gaps = 3/233 (1%)
Query: 56 NTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARL-IALYGKAAMFENARKV 114
+T +Y + L + E+LE + K I + T + I + +E A
Sbjct: 151 DTVVYNVLISCLGKQGKVDEALELLEDMNR-KGIMPDCRTYNIVIDVLSSCGRYEKAYSF 209
Query: 115 FDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFV 174
F M R V+++N LL ++ DE LF ++ + PDL ++ T+I
Sbjct: 210 FGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCM-PDLTTFGTLIDTLA 268
Query: 175 DKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVR 234
G ++ A + K G + +N L+ GF +G+ ++++ M+ + P+
Sbjct: 269 KAGRMEDALEQSARLVKMGHVPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSI 328
Query: 235 SYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+Y + G + T A+EL+ EM + P + T+ LI+ G +E+A
Sbjct: 329 TYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDA 381
>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
Length = 740
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 125/261 (47%), Gaps = 4/261 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI Y NA ++ D M CE ++N L+ K + F+++ +
Sbjct: 449 LINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMV-EC 507
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ P+ VSY +I G +D A +LL ME+ G ++ ++N ++ G RF++A
Sbjct: 508 GLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEA 567
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
EKI + MV + PNV +Y +DGL +T+ A ++ +M ++ P+++T+ +LI G
Sbjct: 568 EKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYG 627
Query: 278 FVNEGNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
EG +EA+ + + G ++ F L+ G +D AF L +R C +
Sbjct: 628 LCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPN 687
Query: 335 QAPLQLVVDRLAKELRVEEAK 355
+++ L KE + E K
Sbjct: 688 YRTYSVLLKGLQKECLLLEEK 708
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 142/315 (45%), Gaps = 16/315 (5%)
Query: 54 RTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLI---ALYGKAAM--- 107
R N YT + L+ + + Y + KEG + AL + +
Sbjct: 335 RPNVQTYTALISGLSRLGKLEVAIGL------YHKMLKEGLVPNTVTYNALINELCVGGR 388
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
F A K+F M G ++N ++ ++ LF+ + K+G P +V+YN
Sbjct: 389 FSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKML-KMGPLPTVVTYN 447
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
T+I ++ KG++++A LL M++ G D T+N L+ GF G+ A ++ MV
Sbjct: 448 TLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVEC 507
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+ PN SY A +DG + + + AL L+ M NP+V ++ A+I G E EA
Sbjct: 508 GLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEA 567
Query: 288 KRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDR 344
++ +K G N + L+ +C G FAF + +CL + ++
Sbjct: 568 EKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYG 627
Query: 345 LAKELRVEEAKELVE 359
L +E + +EA+ L++
Sbjct: 628 LCQEGKADEAEILLK 642
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 118/266 (44%), Gaps = 10/266 (3%)
Query: 66 RLANAKRFRWIEEILEHQKQYKDISKEGF------TARLIALYGKAAMFENARKVFDEMP 119
R+ K R EEI +IS GF L+ K M E AR ++ +M
Sbjct: 131 RILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQML 190
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL 179
+ ++L+FN L+ K E + + + + + PD+ +Y ++I +L
Sbjct: 191 NSGIQPSLLTFNTLINILSKKGKVREAELILSQI-FQYDLSPDVFTYTSLILGHCRNRNL 249
Query: 180 DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNAR 239
D A + M K+G + +T++TL+ G + GR +A + E M+ + P V +Y
Sbjct: 250 DLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLP 309
Query: 240 LDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGC 296
+ L + ++A+ELV M+ + P+V T+ ALI G G LE A Y+ K G
Sbjct: 310 ITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGL 369
Query: 297 GMNKAIFKLLVPFVCEKGDLDFAFNL 322
N + L+ +C G A +
Sbjct: 370 VPNTVTYNALINELCVGGRFSTALKI 395
>gi|449457845|ref|XP_004146658.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Cucumis sativus]
gi|449484609|ref|XP_004156929.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Cucumis sativus]
Length = 501
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 132/276 (47%), Gaps = 7/276 (2%)
Query: 16 ATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSD--LGRFRTNTGIYTGTVQRLANAKRF 73
A P + +I+ E ++K+ + F ++ F+ + ++ + +L +A +F
Sbjct: 39 AKTVTPTHVQQLIQA---ERDIKKALIIFDSATAEYANGFKHDLNTFSLMISKLISANQF 95
Query: 74 RWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNAL 133
R E +L+ K+ K E + YG+ ++ +VF +M +C+ T S+ ++
Sbjct: 96 RLAETLLDRMKEEKIDVTEDILLSICRAYGRIHKPLDSIRVFHKMQDFHCKPTEKSYISV 155
Query: 134 LGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFV-DKGSLDSANTLLYEMEKK 192
L V + ++D+ K+GI P + S N +IKAF + G++D A L M
Sbjct: 156 LAILVEENQLKSAFRFYRDM-RKMGIPPTVTSLNVLIKAFCKNSGTMDKAMHLFRTMSNH 214
Query: 193 GIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKA 252
G D T+ TL+ G +A+++ + M P+V +Y + + GL +A
Sbjct: 215 GCEPDSYTYGTLINGLCRFRSIVEAKELLQEMETKGCSPSVVTYTSIIHGLCQLNNVDEA 274
Query: 253 LELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
+ L+ +M+ K I P+VFT+ +L+ GF G+ A+
Sbjct: 275 MRLLEDMKDKNIEPNVFTYSSLMDGFCKTGHSSRAR 310
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 102/221 (46%), Gaps = 9/221 (4%)
Query: 86 YKDISKEGFTARLIAL-------YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACV 138
Y+D+ K G + +L + + A +F M CE ++ L+
Sbjct: 172 YRDMRKMGIPPTVTSLNVLIKAFCKNSGTMDKAMHLFRTMSNHGCEPDSYTYGTLINGLC 231
Query: 139 NSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL 198
+ E L +++ K G P +V+Y +II ++D A LL +M+ K I ++
Sbjct: 232 RFRSIVEAKELLQEMETK-GCSPSVVTYTSIIHGLCQLNNVDEAMRLLEDMKDKNIEPNV 290
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
T+++L+ GF G + A I E M+ +RPN+ SY+ L+GL E + +ALE+
Sbjct: 291 FTYSSLMDGFCKTGHSSRARDILELMIQKRLRPNMISYSTLLNGLCNEGKINEALEIFDR 350
Query: 259 MRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSG-CGM 298
M+ + PD + ++ + +EA + ++ CG+
Sbjct: 351 MKLQGFKPDAGLYGKIVNCLCDVSRFQEAANFLDEMVLCGI 391
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 126/259 (48%), Gaps = 22/259 (8%)
Query: 72 RFRWIEEILEHQKQYKDISKEGFTARLIA----LYGKAAM--FENARKVFDEMPGRNCEQ 125
RFR I+E ++ +++ +G + ++ ++G + + A ++ ++M +N E
Sbjct: 232 RFR---SIVEAKELLQEMETKGCSPSVVTYTSIIHGLCQLNNVDEAMRLLEDMKDKNIEP 288
Query: 126 TVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANT 184
V ++++L+ G C D L +L + + P+++SY+T++ ++G ++ A
Sbjct: 289 NVFTYSSLMDGFCKTGHSSRARDIL--ELMIQKRLRPNMISYSTLLNGLCNEGKINEALE 346
Query: 185 LLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPN-------VRSYN 237
+ M+ +G + D + ++ RF +A + MV ++PN VR++N
Sbjct: 347 IFDRMKLQGFKPDAGLYGKIVNCLCDVSRFQEAANFLDEMVLCGIKPNRITWSLHVRTHN 406
Query: 238 ARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---S 294
+ GL + +A +L + ++ I+ V TF +L+K F N+ +L + R ++ +
Sbjct: 407 RVIHGLCTINNSNRAFQLYLSVLTRGISITVDTFNSLLKCFCNKKDLPKTSRILDEMVIN 466
Query: 295 GCGMNKAIFKLLVPFVCEK 313
GC ++ +V C++
Sbjct: 467 GCIPQGEMWSTMVNCFCDE 485
>gi|410109873|gb|AFV61016.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
citrodora]
Length = 380
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 134/273 (49%), Gaps = 26/273 (9%)
Query: 66 RLANAKRFRWI-----EEILEHQKQ----------YKDISKEGFTARL------IALYGK 104
RL +F W+ ++LEH + YK+I + G+ A L + + K
Sbjct: 88 RLTREHKF-WVPLDTCRKVLEHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMQRFCK 146
Query: 105 AAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLV 164
A+ V + + +V+SFN L+ + DE L K H G++PD+
Sbjct: 147 EGDIRVAQLVLNAITKWGLRPSVVSFNTLINGYIRLGDLDEGFRL-KSAMHASGVQPDVY 205
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
+Y+ +I + +D AN L EM KG+ + +TF TL+ G NGR A +I++ M
Sbjct: 206 TYSVLINGLCKESKMDDANELFDEMLDKGMVPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 265
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
++ ++ P++ +YN + GL + + K+A +L+ EM + + PD T+ LI G EG++
Sbjct: 266 LSQSLSPDLITYNTLIYGLCKKGELKQAHDLIDEMSMEGLKPDKITYTTLIDGCCKEGDM 325
Query: 285 E---EAKRWYNKSGCGMNKAIFKLLVPFVCEKG 314
E E ++ + ++ ++ L+ +C++G
Sbjct: 326 ETAFEHQKRMIQENIRLDDVVYTALISGLCQEG 358
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 107/206 (51%), Gaps = 3/206 (1%)
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
K G+ P +VS+NT+I ++ G LD L M G++ D+ T++ L+ G +
Sbjct: 162 KWGLRPSVVSFNTLINGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMD 221
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
DA ++++ M++ + PN ++ +DG + A+E+ +M S+ ++PD+ T+ LI
Sbjct: 222 DANELFDEMLDKGMVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLI 281
Query: 276 KGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCL 332
G +G L++A ++ G +K + L+ C++GD++ AF KR E
Sbjct: 282 YGLCKKGELKQAHDLIDEMSMEGLKPDKITYTTLIDGCCKEGDMETAFEHQKRMIQENIR 341
Query: 333 VDQAPLQLVVDRLAKELRVEEAKELV 358
+D ++ L +E R +A++++
Sbjct: 342 LDDVVYTALISGLCQEGRSVDAEKML 367
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 85/164 (51%), Gaps = 1/164 (0%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K + ++A ++FDEM + ++F L+ + + D ++K + + + PDL
Sbjct: 216 KESKMDDANELFDEMLDKGMVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLSPDL 274
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
++YNT+I KG L A+ L+ EM +G++ D IT+ TL+ G G A + +
Sbjct: 275 ITYNTLIYGLCKKGELKQAHDLIDEMSMEGLKPDKITYTTLIDGCCKEGDMETAFEHQKR 334
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPD 267
M+ N+R + Y A + GL E ++ A +++ EM S + P+
Sbjct: 335 MIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVGLKPN 378
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 86/192 (44%), Gaps = 1/192 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI Y + + ++ M + V +++ L+ K D+ + LF ++ K
Sbjct: 175 LINGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDK- 233
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ P+ V++ T+I G +D A + +M + + DLIT+NTL+ G G A
Sbjct: 234 GMVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGELKQA 293
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ + M ++P+ +Y +DG E + A E M + I D + ALI G
Sbjct: 294 HDLIDEMSMEGLKPDKITYTTLIDGCCKEGDMETAFEHQKRMIQENIRLDDVVYTALISG 353
Query: 278 FVNEGNLEEAKR 289
EG +A++
Sbjct: 354 LCQEGRSVDAEK 365
>gi|168000162|ref|XP_001752785.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695948|gb|EDQ82289.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 482
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 118/249 (47%), Gaps = 7/249 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
++ YGKA F + +F +M G TV++FN+L+ K + + + +
Sbjct: 219 MLHTYGKAGKFSEQQALFRQMKGAGVPMTVVTFNSLMAF---QKTVADAEACLRHM-QAA 274
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
I+PD+++Y +I A+ ++ A+ + EM G+R I +NTLL + A
Sbjct: 275 KIKPDVITYTGLINAYSKARRVEEAHVVFREMVASGLRPSRIAYNTLLDAYAKCKEVEGA 334
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
E ++++M RP++RSY L A KKA L+ M+ + P+V T+ L++G
Sbjct: 335 ESLFKSMGQDRCRPDIRSYTTLLAAYANTGNMKKAERLLKRMKQAGLEPNVVTYGTLMQG 394
Query: 278 FVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
+ + ++ + + K+G N IF LLV ++ D + A + K+ C D
Sbjct: 395 YTSVHDINAMLQTFEDLQKAGIKPNSTIFTLLVRTFGQQEDFESALSWFKKMLDSGCPAD 454
Query: 335 QAPLQLVVD 343
Q ++D
Sbjct: 455 QRSRAALMD 463
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 92/215 (42%), Gaps = 13/215 (6%)
Query: 51 GRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIAL------YGK 104
+ + + YTG + + A+R + E ++++ G IA Y K
Sbjct: 274 AKIKPDVITYTGLINAYSKARR------VEEAHVVFREMVASGLRPSRIAYNTLLDAYAK 327
Query: 105 AAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLV 164
E A +F M C + S+ LL A N+ + + L K + + G+EP++V
Sbjct: 328 CKEVEGAESLFKSMGQDRCRPDIRSYTTLLAAYANTGNMKKAERLLKRM-KQAGLEPNVV 386
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
+Y T+++ + +++ +++K GI+ + F L+ F F A ++ M
Sbjct: 387 TYGTLMQGYTSVHDINAMLQTFEDLQKAGIKPNSTIFTLLVRTFGQQEDFESALSWFKKM 446
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
++ + RS A +D +Q ++ LE G +
Sbjct: 447 LDSGCPADQRSRAALMDACQTSEQKQEVLEYFGSL 481
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 88/215 (40%), Gaps = 36/215 (16%)
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
++G+EP++ + ++++A G+ A ++ EM K G +T+ + RF
Sbjct: 135 EVGLEPNVACFTSLLEAHARTGNFVRAESIYQEMLKTGPAPTEVTYQVYINALCKAERFN 194
Query: 216 DAEKIWETM-VNMNVRPNVRSYNARLDG-------------------------------- 242
DAE+I++ + + +P+ R YN L
Sbjct: 195 DAERIFKCLDESAEAKPDARLYNLMLHTYGKAGKFSEQQALFRQMKGAGVPMTVVTFNSL 254
Query: 243 LAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK---RWYNKSGCGMN 299
+A +K A + M++ +I PDV T+ LI + +EEA R SG +
Sbjct: 255 MAFQKTVADAEACLRHMQAAKIKPDVITYTGLINAYSKARRVEEAHVVFREMVASGLRPS 314
Query: 300 KAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
+ + L+ + +++ A +L K +RC D
Sbjct: 315 RIAYNTLLDAYAKCKEVEGAESLFKSMGQDRCRPD 349
>gi|15232008|ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09060
gi|5923671|gb|AAD56322.1|AC009326_9 hypothetical protein [Arabidopsis thaliana]
gi|332641194|gb|AEE74715.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/379 (22%), Positives = 165/379 (43%), Gaps = 40/379 (10%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
V++ + E N + F ++ + + +Y ++RL+ + + I+E +
Sbjct: 13 VLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQ 72
Query: 87 KDISKEGFTARLIALYGKAAMFENARKVFDEMPGR-NCEQTVLSFNALLGACVNSKKFDE 145
+ E +I YGK +M + A VF M CE + S+N LL A V +K++ +
Sbjct: 73 ECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVK 132
Query: 146 VDGLFK----------------------------------DLPHKLGIEPDLVSYNTIIK 171
V+ LF D K G +PD+ SY+T+I
Sbjct: 133 VESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVIN 192
Query: 172 AFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMV-NMNVR 230
G LD A L EM ++G+ D+ +N L+ GF A ++W+ ++ + +V
Sbjct: 193 DLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVY 252
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
PNV+++N + GL+ + L++ M+ E D++T+ +LI G + GN+++A+
Sbjct: 253 PNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESV 312
Query: 291 YN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAK 347
+N + ++ + ++ C G + + L R + V+ +++ L +
Sbjct: 313 FNELDERKASIDVVTYNTMLGGFCRCGKIKESLEL-WRIMEHKNSVNIVSYNILIKGLLE 371
Query: 348 ELRVEEAKELVELGKTNSY 366
+++EA + L Y
Sbjct: 372 NGKIDEATMIWRLMPAKGY 390
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 91/186 (48%), Gaps = 7/186 (3%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI KA F A EM + + +++ LL +K D L +L H+
Sbjct: 505 LICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKID----LALELWHQF 560
Query: 158 ---GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRF 214
G+E D++ +N +I G LD A T++ ME + +L+T+NTL+ GF+ G
Sbjct: 561 LQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDS 620
Query: 215 ADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYAL 274
A IW M M ++P++ SYN + GL + + A+E + R+ I P V+T+ L
Sbjct: 621 NRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNIL 680
Query: 275 IKGFVN 280
++ VN
Sbjct: 681 VRAVVN 686
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 145/335 (43%), Gaps = 7/335 (2%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
+I G KE + K ++ + + + N + + L+ R +I E KQ
Sbjct: 225 LIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQ- 283
Query: 87 KDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
+ K+ +T + LI A + A VF+E+ R V+++N +LG K E
Sbjct: 284 NEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKE 343
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
L++ + HK + ++VSYN +IK ++ G +D A + M KG D T+ +
Sbjct: 344 SLELWRIMEHKNSV--NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFI 401
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEIN 265
G NG A + + + + +V +Y + +D L +K+ ++A LV EM +
Sbjct: 402 HGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVE 461
Query: 266 PDVFTFYALIKGFVNEGNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
+ ALI G + + L EA R K+GC + +L+ +C+ G A
Sbjct: 462 LNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAF 521
Query: 323 CKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
K D +++ L ++ +++ A EL
Sbjct: 522 VKEMLENGWKPDLKTYSILLCGLCRDRKIDLALEL 556
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 123/278 (44%), Gaps = 10/278 (3%)
Query: 91 KEGFT------ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
KEGF + +I KA ++A ++FDEM R V +N L+ + K
Sbjct: 177 KEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHK 236
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
L+ L + P++ ++N +I G +D + M++ DL T+++L
Sbjct: 237 TAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSL 296
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+ G G AE ++ + +V +YN L G + K++LEL M K
Sbjct: 297 IHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN- 355
Query: 265 NPDVFTFYALIKGFVNEGNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFN 321
+ ++ ++ LIKG + G ++EA R G +K + + + +C G ++ A
Sbjct: 356 SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALG 415
Query: 322 LCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ + S +D ++D L K+ R+EEA LV+
Sbjct: 416 VMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVK 453
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 83/177 (46%), Gaps = 1/177 (0%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A V E+ V ++ +++ K+ +E L K++ K G+E + N +I
Sbjct: 413 ALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMS-KHGVELNSHVCNALI 471
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
+ L A+ L EM K G R ++++N L+ G G+F +A + M+ +
Sbjct: 472 GGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWK 531
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
P++++Y+ L GL +++ ALEL + + DV LI G + G L++A
Sbjct: 532 PDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDA 588
>gi|356519375|ref|XP_003528348.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 589
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 131/271 (48%), Gaps = 9/271 (3%)
Query: 25 GSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAK----RFRWIEEIL 80
++I G+ E N+ R D+G ++N+ Y + L A ++E+I
Sbjct: 145 ATLINGLCAEGNVARAARFADSLEDMGH-QSNSYTYGAIINGLCKAGDTSGAILYLEKI- 202
Query: 81 EHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNS 140
+ + D+ + ++ K M A +F M + + ++++N+L+ N
Sbjct: 203 --KGRNCDLDVVIAYSTIMDSLCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNF 260
Query: 141 KKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLIT 200
++ E L ++ K GI P++ ++N ++ F G + A T++ M G+ D++T
Sbjct: 261 GRWKEATTLLGNMMRK-GIMPNVQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVT 319
Query: 201 FNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMR 260
+N+++ G + DA K++E M++ PN+ +Y++ + G K KAL L+GEM
Sbjct: 320 YNSVISGHCLLSQMGDAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMV 379
Query: 261 SKEINPDVFTFYALIKGFVNEGNLEEAKRWY 291
+ +NPDV T+ LI GF G E AK +
Sbjct: 380 NSGLNPDVVTWSTLIGGFCKAGKPEAAKELF 410
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 148/307 (48%), Gaps = 6/307 (1%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMP 119
Y + L N R++ +L + + + L+ + K M A+ + M
Sbjct: 250 YNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLVDNFCKDGMISRAKTIMGFMV 309
Query: 120 GRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGS 178
E V+++N+++ G C+ S+ D V +F+ + HK G P+LV+Y+++I + +
Sbjct: 310 HVGVEPDVVTYNSVISGHCLLSQMGDAVK-VFELMIHK-GFLPNLVTYSSLIHGWCKTKN 367
Query: 179 LDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNA 238
++ A LL EM G+ D++T++TL+ GF G+ A++++ TM + PN+++
Sbjct: 368 INKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKELFCTMHEHDQHPNLQTCAI 427
Query: 239 RLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSG 295
LDGL + +A+ L EM + +V + ++ G + G L +A+ ++ G
Sbjct: 428 ILDGLFKCQFHSEAISLFREMEKMNLELNVVIYNIVLDGMCSFGKLNDAQELFSCLPSKG 487
Query: 296 CGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAK 355
++ + ++ +C++G LD A NL + CL ++ + V L + + +
Sbjct: 488 IKIDVVAYTTMIKGLCKEGLLDDAENLLMKMEENGCLPNEFTYNVFVRGLLQRYDISRST 547
Query: 356 ELVELGK 362
+ + L K
Sbjct: 548 KYLLLMK 554
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/295 (21%), Positives = 126/295 (42%), Gaps = 17/295 (5%)
Query: 10 CSFSTTATATGPKFIGSVIR-GIYKE-NNLKRLVDKFKKSSDLGR------FRTNTGIYT 61
C+F AT +G+++R GI LVD F K + R F + G+
Sbjct: 258 CNFGRWKEAT--TLLGNMMRKGIMPNVQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEP 315
Query: 62 GTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIA----LYG--KAAMFENARKVF 115
V + + ++ + K ++ + +GF L+ ++G K A +
Sbjct: 316 DVVTYNSVISGHCLLSQMGDAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLL 375
Query: 116 DEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVD 175
EM V++++ L+G + K + LF + H+ P+L + I+
Sbjct: 376 GEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKELFCTM-HEHDQHPNLQTCAIILDGLFK 434
Query: 176 KGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRS 235
A +L EMEK + L+++ +N +L G S G+ DA++++ + + ++ +V +
Sbjct: 435 CQFHSEAISLFREMEKMNLELNVVIYNIVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVA 494
Query: 236 YNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
Y + GL E A L+ +M P+ FT+ ++G + ++ + ++
Sbjct: 495 YTTMIKGLCKEGLLDDAENLLMKMEENGCLPNEFTYNVFVRGLLQRYDISRSTKY 549
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 83/183 (45%), Gaps = 1/183 (0%)
Query: 96 ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPH 155
+ LI + KA E A+++F M + + + +L + E LF+++
Sbjct: 391 STLIGGFCKAGKPEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREM-E 449
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
K+ +E ++V YN ++ G L+ A L + KGI++D++ + T++ G G
Sbjct: 450 KMNLELNVVIYNIVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLD 509
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
DAE + M PN +YN + GL ++ + + M+ K ++ D T LI
Sbjct: 510 DAENLLMKMEENGCLPNEFTYNVFVRGLLQRYDISRSTKYLLLMKGKGLSADATTTELLI 569
Query: 276 KGF 278
F
Sbjct: 570 SYF 572
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 92/245 (37%), Gaps = 40/245 (16%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
E A F +M N F L G V K + L K + + LGI+PD+ +
Sbjct: 53 EAALSFFHKMVVMNPLPREKDFTKLFGIIVKMKHYATTISLIKHI-YSLGIKPDVYTLTI 111
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
II ++L M K G+ ++TF TL+ G + G A A + +++ +M
Sbjct: 112 IINCLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARAARFADSLEDMG 171
Query: 229 VRPNVRSYNARLDGLAIEKQTK------------------------------------KA 252
+ N +Y A ++GL T +A
Sbjct: 172 HQSNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDSLCKDGMVCEA 231
Query: 253 LELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPF 309
L L M SK I PD+ + +LI G N G +EA + G N F +LV
Sbjct: 232 LNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLVDN 291
Query: 310 VCEKG 314
C+ G
Sbjct: 292 FCKDG 296
>gi|255660804|gb|ACU25571.1| pentatricopeptide repeat-containing protein [Glandularia araucana]
Length = 418
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 142/313 (45%), Gaps = 4/313 (1%)
Query: 5 SRLLSCSFSTTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTV 64
S + + T T ++ S + Y E+ R + + + +FR +
Sbjct: 49 SAVFAAILETKGTQISDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTXRKVI 108
Query: 65 QRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCE 124
+ L K F+ + E +Y + F L+ + K A+ VFD +
Sbjct: 109 EHLMKLKYFKLVWGFYEESLEYGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLR 168
Query: 125 QTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANT 184
+V+SFN L+ + DE L K+ G++PD+ +Y+ +I + ++ AN
Sbjct: 169 PSVVSFNTLMNGYIKLGDLDEGFRL-KNAMQASGVQPDVYTYSVLINGLCKESKMEDANE 227
Query: 185 LLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLA 244
L EM G+ + +TF TL+ G NGR A +I++ M++ ++ P++ +YN + GL
Sbjct: 228 LFDEMLNNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLC 287
Query: 245 IEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA---KRWYNKSGCGMNKA 301
+ K+A +L EM K + PD T+ LI G EG+LE A ++ K ++
Sbjct: 288 KKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDV 347
Query: 302 IFKLLVPFVCEKG 314
+ L+ +C++G
Sbjct: 348 AYTALISGLCQEG 360
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 83/173 (47%), Gaps = 1/173 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K + A +++ +M ++ ++++N L+ + L ++ K
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMK- 305
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD ++Y T+I +G L++A M K+ IRLD + + L+ G GR DA
Sbjct: 306 GLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDA 365
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
EK+ M+++ ++P + +Y ++ + +L+ EM+ P V T
Sbjct: 366 EKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418
>gi|225464138|ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46100
[Vitis vinifera]
gi|296087974|emb|CBI35257.3| unnamed protein product [Vitis vinifera]
Length = 503
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 135/306 (44%), Gaps = 41/306 (13%)
Query: 22 KFIGS--VIRGIYKENNLKRLVDKFKKSSD--LGRFRTNTGIYTGTVQRLANAKRFRWIE 77
K IGS V + I E ++++ + F ++ FR + ++ + RL +A FR E
Sbjct: 11 KQIGSAQVAQLIKAERDIQKAIVIFDSATAEYTNGFRHSHQTFSLMISRLVSANHFRLAE 70
Query: 78 EILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCE------------- 124
E+L K+ K E + YG+ +A +VF +M CE
Sbjct: 71 ELLCRMKEEKCNITEDIFLSICRAYGRVHKPLDAVRVFRKMKEYECEPSQKSYITVFAIL 130
Query: 125 ----------------------QTVLSFNALLGA-CVNSKKFDEVDGLFKDLPHKLGIEP 161
+V S N L+ A C NS D +F+++P++ G P
Sbjct: 131 VGENQLKLALRFYRYMREMGIPPSVASLNVLIKALCKNSGTMDAALRIFREMPNR-GCPP 189
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
D +Y T+I G + A L EME K ++T+ +L+ G + A ++
Sbjct: 190 DSYTYGTLINGLCRLGKIGEAKELFKEMETKACSPTVVTYTSLIHGLCQSKDLDSAIRLL 249
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
E M + ++PNV +Y++ +DG + +ALEL+ M S+ P++ T+ L+ G E
Sbjct: 250 EEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRRHLPNMITYSTLVHGLCKE 309
Query: 282 GNLEEA 287
G L+EA
Sbjct: 310 GKLQEA 315
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 130/305 (42%), Gaps = 45/305 (14%)
Query: 100 ALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGI 159
AL + + A ++F EMP R C ++ L+ K E LFK++ K
Sbjct: 164 ALCKNSGTMDAALRIFREMPNRGCPPDSYTYGTLINGLCRLGKIGEAKELFKEMETK-AC 222
Query: 160 EPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEK 219
P +V+Y ++I LDSA LL EM KGI+ ++ T+++L+ G +G + A +
Sbjct: 223 SPTVVTYTSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALE 282
Query: 220 IWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFV 279
+ + MV+ PN+ +Y+ + GL E + ++A+E++ M+ + + PD + +I GF
Sbjct: 283 LLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFC 342
Query: 280 NEGNLEEAKRWYNK--------------------------------------------SG 295
+ EA + ++ G
Sbjct: 343 DICKFHEAANFLDEMVLGGISPNRLTWSLHVRIHNIVVQGLCTEHPNRAFQLYLSMRTRG 402
Query: 296 CGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAK 355
++ F LV + C KGDL A +L + C+ D+ VV +V E+
Sbjct: 403 ISIDAKTFDSLVNYFCNKGDLHKAAHLVDEMVLDGCIPDEVTWNAVVCAFWDRRKVRESA 462
Query: 356 ELVEL 360
ELV++
Sbjct: 463 ELVQV 467
>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 499
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 144/311 (46%), Gaps = 6/311 (1%)
Query: 53 FRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFT-ARLIALYGKAAMFENA 111
R +T + + AKR + ++ E + Q ++ S T + LI K E A
Sbjct: 120 LRPDTYTFNVLMNAFKKAKRVDSVWKLFE-EMQNQNCSPNVITYSILIDAVCKCGGVEKA 178
Query: 112 RKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIK 171
KVF +M R C + ++ +++ S D+ LF+++ + G+ V YN++I
Sbjct: 179 LKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSE-GLVATRVVYNSLIH 237
Query: 172 AFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRP 231
G D+A L EM KG++ D +TF +L+ G GR ++A +I++ ++
Sbjct: 238 GLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCAL 297
Query: 232 NVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY 291
+V YN +D L K+ +A E+ GE+ + PDV+TF AL+ G G + +A
Sbjct: 298 DVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILL 357
Query: 292 N---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKE 348
++GC + ++ L+ + + G ++ A L S D ++D K
Sbjct: 358 GDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKG 417
Query: 349 LRVEEAKELVE 359
R+E+A L E
Sbjct: 418 GRIEDALRLFE 428
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 141/332 (42%), Gaps = 39/332 (11%)
Query: 61 TGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPG 120
T V+ L A+RF EE+L ++ + I + L Y A + E + + M G
Sbjct: 23 TTLVEMLGIARRFNEAEEVLAEVEKSRYILQPRIFIELARGYASAGLLEKSVEALKRMEG 82
Query: 121 RNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLD 180
C T ++N+L+ A V + + +++ + G+ PD ++N ++ AF +D
Sbjct: 83 HRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQS-GLRPDTYTFNVLMNAFKKAKRVD 141
Query: 181 SANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARL 240
S L EM+ + ++IT++ L+ G A K++ M + RPN+ +Y + +
Sbjct: 142 SVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMI 201
Query: 241 DGLAIEKQTKKAL-----------------------------------ELVGEMRSKEIN 265
DGL KA +L EM SK +
Sbjct: 202 DGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQ 261
Query: 266 PDVFTFYALIKGFVNEGNLEEAKRWYNKS---GCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
PD TF +L+ G G EA+R + ++ GC ++ ++ +L+ +C+ LD A+ +
Sbjct: 262 PDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEI 321
Query: 323 CKRTFSERCLVDQAPLQLVVDRLAKELRVEEA 354
+ + D ++D L K R+ +A
Sbjct: 322 FGELEEDGLVPDVYTFNALMDGLCKSGRIHDA 353
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 117/245 (47%), Gaps = 9/245 (3%)
Query: 86 YKDISKEGFTA------RLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
+++++ EG A LI G++ + A K+F EM + + ++F +L+
Sbjct: 217 FEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGV 276
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
+ + E +F++ +G D+ YN +I LD A + E+E+ G+ D+
Sbjct: 277 AGRASEARRIFQE-ARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVY 335
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
TFN L+ G +GR DA + M P+V YN +DGL + ++A +L+ EM
Sbjct: 336 TFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEM 395
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK-SGCGM-NKAIFKLLVPFVCEKGDLD 317
+S PDV T+ LI G +E+A R + + S G N + ++ +C G +D
Sbjct: 396 QSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGFANTVTYNTILNGLCMAGRVD 455
Query: 318 FAFNL 322
A+ L
Sbjct: 456 EAYKL 460
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 94/198 (47%), Gaps = 3/198 (1%)
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
+YN++I AFV G A + M + G+R D TFN L+ F R K++E M
Sbjct: 91 AYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEM 150
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
N N PNV +Y+ +D + +KAL++ +M+S+ P++FT+ ++I G G++
Sbjct: 151 QNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHV 210
Query: 285 EEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLV 341
++A + + G + ++ L+ + G D A L + S+ D +
Sbjct: 211 DKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSL 270
Query: 342 VDRLAKELRVEEAKELVE 359
V L R EA+ + +
Sbjct: 271 VYGLGVAGRASEARRIFQ 288
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 127/307 (41%), Gaps = 54/307 (17%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRL-------ANAKRFRWIEE 78
S+I G+ K ++ + F++ + G T +Y + L A AK FR E
Sbjct: 199 SMIDGLGKSGHVDKAFFLFEEMTSEGLVATRV-VYNSLIHGLGRSGRADAAAKLFR---E 254
Query: 79 ILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACV 138
+L Q ++ FT+ + L G A AR++F E C V +N L+
Sbjct: 255 MLSKGLQPDHVT---FTSLVYGL-GVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLC 310
Query: 139 NSKKFDEV---------DGLFKDL-------------------------PHKLGIEPDLV 164
SK+ DE DGL D+ + G PD+
Sbjct: 311 KSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVT 370
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
YNT+I G ++ A LL EM+ G D++T+NTL+ GR DA +++E
Sbjct: 371 VYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEE- 429
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE----INPDVFTFYALIKGFVN 280
++ N +YN L+GL + + +A +L M+ + I+PD T+ L+ G
Sbjct: 430 ISAKGFANTVTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLLNGARQ 489
Query: 281 EGNLEEA 287
G E A
Sbjct: 490 AGLSELA 496
Score = 37.7 bits (86), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLG---IE 160
K E+A ++F+E+ + TV ++N +L + + DE LF + + I+
Sbjct: 416 KGGRIEDALRLFEEISAKGFANTV-TYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVID 474
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTL 185
PD V+Y T++ G + AN+L
Sbjct: 475 PDFVTYTTLLNGARQAGLSELANSL 499
>gi|255660800|gb|ACU25569.1| pentatricopeptide repeat-containing protein [Verbena rigida]
Length = 418
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 144/313 (46%), Gaps = 4/313 (1%)
Query: 5 SRLLSCSFSTTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTV 64
S + + T T ++ S + Y E+ R + + + +FR +
Sbjct: 49 SAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVL 108
Query: 65 QRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCE 124
+ L K F+ + E + + F L+ + K A+ VFD +
Sbjct: 109 EHLMKLKYFKLVWGFYEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLR 168
Query: 125 QTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANT 184
+V+SFN L+ + +E L K+ G++PD+ +Y+ +I + +D AN
Sbjct: 169 PSVVSFNTLMNGYIKLGDLNEGFRL-KNAMQASGVQPDVYTYSVLINGLCKESKMDDANV 227
Query: 185 LLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLA 244
L EM KG+ + +TF TL+ G NGR A +I++ M++ ++ P++ +YN + GL
Sbjct: 228 LFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLC 287
Query: 245 IEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA---KRWYNKSGCGMNKA 301
+ K+A +L+ EM K + PD FT+ LI G EG+LE A ++ K ++
Sbjct: 288 KKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDV 347
Query: 302 IFKLLVPFVCEKG 314
+ L+ +C++G
Sbjct: 348 AYTALISGLCQEG 360
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 82/173 (47%), Gaps = 1/173 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K + A +++ +M ++ ++++N L+ + L ++ K
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMK- 305
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD +Y T+I +G L++A M K+ IRLD + + L+ G GR DA
Sbjct: 306 GLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDA 365
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
EK+ M+++ ++P + +Y ++ + +L+ EM+ P V T
Sbjct: 366 EKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWXGSKLLKEMQRDGYKPSVVT 418
>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
Length = 543
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 151/345 (43%), Gaps = 10/345 (2%)
Query: 21 PKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEIL 80
P +G V++ + K+ ++ ++ S G N ++ L A+R +I
Sbjct: 34 PNTVGRVLQ-VIKDVDVSLFFFRWVTRSHRGESIHNNFTCNCLLRTLVKARRHHQAYQIF 92
Query: 81 EHQ--KQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACV 138
+ Q+ D + + LI + KA E A ++ EM R V++ ++++ A
Sbjct: 93 RDELLGQHCDTNHITYNT-LIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALC 151
Query: 139 NSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL 198
N+ F++ + PD V +N ++ L A ++ EM ++GI D+
Sbjct: 152 NTGNLSRAMQYFRE---SVECAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDV 208
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
+T+N+L+ G + R +A ++ ETMV VRPN+ +YN + G T A +L+
Sbjct: 209 VTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIER 268
Query: 259 MRSKEINPDVFTFYALIKGFVNEGNLE---EAKRWYNKSGCGMNKAIFKLLVPFVCEKGD 315
M +PDV TF +LI GF + ++ E K C N + +L+ +C+ G
Sbjct: 269 MIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGR 328
Query: 316 LDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVEL 360
+ A L L D ++ + ++E+A ++ L
Sbjct: 329 ANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNL 373
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 135/300 (45%), Gaps = 41/300 (13%)
Query: 99 IALYG--KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHK 156
I ++G KA AR++ +EM R V+++N+L+ S + +E L + + K
Sbjct: 178 ILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMV-K 236
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
+ P+LV+YNT+I + G A+ L+ M + G D++TFN+L+ GF +
Sbjct: 237 RKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDK 296
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
A ++ M PN+ +YN + GL + +A EL+ EM + I PD+ T+ +LI
Sbjct: 297 ACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIG 356
Query: 277 GFVNEGNLEEAKRWYN-----------KSGCGMNKAIFK--------LLVPFVCEKGDLD 317
F +E+A + N S C + A+ K L+ + + G +
Sbjct: 357 IFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIP 416
Query: 318 --FAFN------LCKRTFSER-----------CLVDQAPLQLVVDRLAKELRVEEAKELV 358
F FN C R E C + +++V L K RV++AKE++
Sbjct: 417 NLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVL 476
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 130/296 (43%), Gaps = 5/296 (1%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
++ G+ K N L ++ S+ G + Y + L + R ++LE +
Sbjct: 179 LVHGLCKANQLSEARQMIEEMSERG-IVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKR 237
Query: 87 KDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEV 146
K LI Y K A ++ + M V++FN+L+ K D+
Sbjct: 238 KVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKA 297
Query: 147 DGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLL 206
+ + L P+LV+YN +I D G + A LL EM+ +GI D+IT+N+L+
Sbjct: 298 CEVLHLMKKGL-CAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIG 356
Query: 207 GFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINP 266
F N + A +I MV V P+ SY L ++ +A L+ M P
Sbjct: 357 IFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIP 416
Query: 267 DVFTFYALIKGFVNEGNLEEAKRW---YNKSGCGMNKAIFKLLVPFVCEKGDLDFA 319
++FTF +L++G L+EA+ + GC + +++LV +C+ G +D A
Sbjct: 417 NLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDA 472
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 99/216 (45%), Gaps = 4/216 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI+ A A ++ EM GR ++++N+L+G + + ++ + ++L +
Sbjct: 319 LISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQI-QNLMVER 377
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ PD +SY T+ A + D A LL M G +L TFN+L+ G + R +A
Sbjct: 378 GVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEA 437
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ M + P +Y + GL + A E++ M S+ I P V + ++
Sbjct: 438 RHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHT 497
Query: 278 FVNEGNLEEAKRWYNKSGCGMNKAI---FKLLVPFV 310
EG + A ++++ +KA ++ L+ FV
Sbjct: 498 LAREGKQDLALHYFDQVVAAESKACDPSYQKLLEFV 533
>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 603
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 129/285 (45%), Gaps = 7/285 (2%)
Query: 78 EILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGAC 137
++LE D+ R + GK + A +V D R C V+++ L+ A
Sbjct: 198 QVLERMSVAPDVVTYNTILRSLCDSGK---LKEAMEVLDRQMQRECYPDVITYTILIEAT 254
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLD 197
N + L ++ K G +PD+V+YN +I +G LD A L M G + +
Sbjct: 255 CNDSGVGQAMKLLDEM-RKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPN 313
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
+IT N +L S GR+ DAE++ M+ P+V ++N ++ L ++ +A++++
Sbjct: 314 VITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLE 373
Query: 258 EMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKG 314
+M P+ ++ L+ GF E ++ A + GC + + L+ +C+ G
Sbjct: 374 KMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDG 433
Query: 315 DLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
D A + + S+ C V+D L K + E A EL+E
Sbjct: 434 KADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLE 478
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 91/173 (52%), Gaps = 1/173 (0%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
+ A + + M R C ++++N LL A K D + L K G P L++YN
Sbjct: 400 MDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSK-GCSPVLITYN 458
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
T+I G + A LL EM +KG++ D+IT++TLL G G+ +A KI+ M +
Sbjct: 459 TVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGL 518
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
+++P+ +YNA + GL +QT +A++ + M K P T+ LI+G +
Sbjct: 519 SIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEGIAD 571
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 96/183 (52%), Gaps = 1/183 (0%)
Query: 110 NARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTI 169
+A ++ +M + C +V++FN L+ + + + +P K G P+ +SYN +
Sbjct: 332 DAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMP-KHGCMPNSLSYNPL 390
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
+ F + +D A L M +G D++T+NTLL +G+ A +I + +
Sbjct: 391 LHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGC 450
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
P + +YN +DGL +T+ A EL+ EMR K + PD+ T+ L++G EG ++EA +
Sbjct: 451 SPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIK 510
Query: 290 WYN 292
++
Sbjct: 511 IFH 513
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 130/284 (45%), Gaps = 7/284 (2%)
Query: 80 LEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
LE DI LI + ++ A ++ + + V+++N L+G
Sbjct: 130 LERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCK 189
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
S + D+ + + ++ + PD+V+YNTI+++ D G L A +L ++ D+I
Sbjct: 190 SGEIDKALQVLE----RMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVI 245
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
T+ L+ ++ A K+ + M +P+V +YN ++G+ E + +A++ + M
Sbjct: 246 TYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNM 305
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDL 316
P+V T +++ + G +A+R + GC + F +L+ F+C K L
Sbjct: 306 PLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLL 365
Query: 317 DFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVEL 360
A ++ ++ C+ + ++ +E +++ A E +E+
Sbjct: 366 GRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEI 409
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 86/191 (45%), Gaps = 6/191 (3%)
Query: 167 NTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVN 226
N ++ V G L+ L M +G D+I +L+ GF +G+ A +I E + N
Sbjct: 111 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILEN 170
Query: 227 MNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEE 286
P+V +YN + G + KAL+++ M + PDV T+ +++ + G L+E
Sbjct: 171 SGAVPDVITYNVLIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGKLKE 227
Query: 287 AKRWYNKS---GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVD 343
A ++ C + + +L+ C + A L + C D ++++
Sbjct: 228 AMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLIN 287
Query: 344 RLAKELRVEEA 354
+ KE R++EA
Sbjct: 288 GICKEGRLDEA 298
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 98/211 (46%), Gaps = 8/211 (3%)
Query: 37 LKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRF-RWIE--EILEHQKQYKDISKEG 93
L R +D +K G N+ Y + K+ R IE EI+ + Y DI
Sbjct: 365 LGRAIDVLEKMPKHGCM-PNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYN 423
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
+ GKA + A ++ +++ + C ++++N ++ K + L +++
Sbjct: 424 TLLTALCKDGKA---DAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEM 480
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
K G++PD+++Y+T+++ +G +D A + ++ME I+ +T+N ++LG +
Sbjct: 481 RRK-GLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQ 539
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLA 244
+ A MV +P +Y ++G+A
Sbjct: 540 TSRAIDFLAYMVEKGCKPTKATYTILIEGIA 570
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 67/158 (42%)
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS 261
N L NG + K E M+ P+V + + + G +T+KA ++ + +
Sbjct: 111 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILEN 170
Query: 262 KEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFN 321
PDV T+ LI G+ G +++A + + + + ++ +C+ G L A
Sbjct: 171 SGAVPDVITYNVLIGGYCKSGEIDKALQVLERMSVAPDVVTYNTILRSLCDSGKLKEAME 230
Query: 322 LCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ R C D ++++ + V +A +L++
Sbjct: 231 VLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLD 268
>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
Length = 757
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 138/283 (48%), Gaps = 8/283 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I+ K E A K+ + G+ V ++N+L+ S+ L+K++ K
Sbjct: 377 IISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTK- 435
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G PD +YN +I + +G L A LL EME G ++IT+NTL+ GF N R A+A
Sbjct: 436 GCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEA 495
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
E+I++ M V N +YN +DGL ++ ++A +L+ +M + + PD FT+ +L+
Sbjct: 496 EEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTY 555
Query: 278 FVNEGNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
F G++++A + GC + + L+ +C+ G ++ A L + + +
Sbjct: 556 FCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLT 615
Query: 335 QAPLQLVVDRLAKELRVEEA----KELVELGKTNSYCRYNLKF 373
V+ L + R +EA +E++E + Y + F
Sbjct: 616 PHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVF 658
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 137/310 (44%), Gaps = 3/310 (0%)
Query: 53 FRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENAR 112
R + + ++ L A + R ++E + + + E ++ + + + A
Sbjct: 191 IRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAM 250
Query: 113 KVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKA 172
+V ++M C T ++ N L+ + +E +++ + G PD ++N ++
Sbjct: 251 RVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNG 310
Query: 173 FVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPN 232
G + A ++ M ++G D+ T+N+L+ G G +A K+ M+ + PN
Sbjct: 311 LSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPN 370
Query: 233 VRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN 292
+YN + L E Q ++A +L + K I PDV T+ +LI+G N A Y
Sbjct: 371 TVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYK 430
Query: 293 K---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKEL 349
+ GC ++ + +L+ +C +G L A NL K C + ++D K
Sbjct: 431 EMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNK 490
Query: 350 RVEEAKELVE 359
R+ EA+E+ +
Sbjct: 491 RIAEAEEIFD 500
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 131/293 (44%), Gaps = 13/293 (4%)
Query: 73 FRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNA 132
R+IEE+ + + D K F L+ K ++A +V D M + + ++N+
Sbjct: 285 LRFIEEMSLREGFFPD--KYTFNM-LVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNS 341
Query: 133 LL-GACVNSKKFDEVDGLFKDLPHKL--GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEM 189
L+ G C K EVD K L + P+ V+YNTII + ++ A L +
Sbjct: 342 LISGLC----KLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVL 397
Query: 190 EKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQT 249
KGI D+ T+N+L+ G + A ++++ M P+ +YN +D L +
Sbjct: 398 TGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKL 457
Query: 250 KKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLL 306
++AL L+ EM +V T+ LI GF + EA+ +++ G N + L
Sbjct: 458 QEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTL 517
Query: 307 VPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ +C+ ++ A L + E D+ ++ K +++A ++V+
Sbjct: 518 IDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQ 570
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 90/187 (48%), Gaps = 5/187 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K A ++FD+M + + +++N L+ S++ +E L + +
Sbjct: 482 LIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIME- 540
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ PD +YN+++ F G + A ++ M G D++T+ TL+ G GR A
Sbjct: 541 GLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAA 600
Query: 218 EKIWET--MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
K+ T M +N+ P+ +YN + L K++K+A+ L EM K PD T+ +
Sbjct: 601 TKLLRTIQMKGINLTPH--AYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVF 658
Query: 276 KGFVNEG 282
+G G
Sbjct: 659 RGLCQGG 665
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 111/242 (45%), Gaps = 24/242 (9%)
Query: 143 FDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKK---GIRLDLI 199
F +FK++ HKLG + + I+K S+ ++LL +E G+ +++
Sbjct: 85 FKPSSSIFKEVLHKLGKAGEFDAMKDILKEMKISLSVIDNDSLLVFIESYASFGLYNEIL 144
Query: 200 TFNTLL---LGFYSNGRF--------ADAEKI------WETMVNMNVRPNVRSYNARLDG 242
F + G +N F D K+ MV+ +RP+V ++N +
Sbjct: 145 QFVDAMEVEFGVVANTHFYNFLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNILIKA 204
Query: 243 LAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMN 299
L Q + A+ L+ EM + PD TF +++GF+ EGNL+ A R + +GC +
Sbjct: 205 LCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVT 264
Query: 300 KAIFKLLVPFVCEKGDLDFAFNLCKR-TFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
+LV C++G ++ A + + E D+ ++V+ L+K V+ A E++
Sbjct: 265 NVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVM 324
Query: 359 EL 360
++
Sbjct: 325 DM 326
>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 686
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 118/234 (50%), Gaps = 4/234 (1%)
Query: 127 VLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLL 186
V+ ++A++ + + LF ++ K GI P++V+YN +I F G +A LL
Sbjct: 253 VVIYSAIIDGLCKDGRHSDSHNLFIEMQDK-GIFPNIVTYNCMIGGFCISGRWSAAQRLL 311
Query: 187 YEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIE 246
EM ++ I +++T+N L+ F G+F +A ++++ M+ + PN +YN+ +DG +
Sbjct: 312 QEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQ 371
Query: 247 KQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIF 303
+ A ++ M +K +PDVFTF LI G+ +++ + + G N +
Sbjct: 372 DRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTY 431
Query: 304 KLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
L+ C GDL+ A +L ++ S D ++D L ++++A E+
Sbjct: 432 NTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEM 485
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 122/256 (47%), Gaps = 22/256 (8%)
Query: 56 NTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFT-ARLIALYGKAAMFENARKV 114
NT Y + R E++ + K S + FT LI Y A ++ ++
Sbjct: 357 NTITYNSMIDGFCKQDRLDAAEDMF-YLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMEL 415
Query: 115 FDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKL---GIEPDLVSYNTII 170
EMP R +++N L+ G C+ +++ DL ++ G+ PD+V+ NT++
Sbjct: 416 LHEMPRRGLVANTVTYNTLIHGFCL----VGDLNAAL-DLSQQMISSGVCPDIVTCNTLL 470
Query: 171 KAFVDKGSLDSANTLLYEMEKK-----------GIRLDLITFNTLLLGFYSNGRFADAEK 219
D G L A + M+K G+ D++T+N L+ G + G+F +AE+
Sbjct: 471 DGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEE 530
Query: 220 IWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFV 279
++E M + + P+ +Y++ +DGL + + +A ++ M SK +P+V TF LI G+
Sbjct: 531 LYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYC 590
Query: 280 NEGNLEEAKRWYNKSG 295
G +++ + + G
Sbjct: 591 KAGRVDDGLELFCEMG 606
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 114/241 (47%), Gaps = 5/241 (2%)
Query: 123 CEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSA 182
C VL+F L+ + E L + G++PD ++Y T + G SA
Sbjct: 178 CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVEN-GLQPDQITYGTFVDGMCKMGDTVSA 236
Query: 183 NTLLYEMEK-KGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLD 241
LL +ME+ I+ +++ ++ ++ G +GR +D+ ++ M + + PN+ +YN +
Sbjct: 237 LNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIG 296
Query: 242 GLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGM 298
G I + A L+ EM ++I+P+V T+ ALI FV EG EA Y++ G
Sbjct: 297 GFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIP 356
Query: 299 NKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
N + ++ C++ LD A ++ ++ C D ++D R+++ EL+
Sbjct: 357 NTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELL 416
Query: 359 E 359
Sbjct: 417 H 417
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 119/273 (43%), Gaps = 13/273 (4%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
S+I G K++ L D F + G + +T + AKR E+L +
Sbjct: 363 SMIDGFCKQDRLDAAEDMFYLMATKG-CSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPR 421
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFD 144
++ LI + A + +M +++ N LL G C N K D
Sbjct: 422 RGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKD 481
Query: 145 EVDGLFK---------DLPHKL-GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGI 194
++ +FK D H G+EPD+++YN +I +++G A L EM +GI
Sbjct: 482 ALE-MFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGI 540
Query: 195 RLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALE 254
D IT+++++ G R +A +++ +M + + PNV ++N ++G + LE
Sbjct: 541 VPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLE 600
Query: 255 LVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
L EM + I D + LI GF GN+ A
Sbjct: 601 LFCEMGRRGIVADAIIYITLIYGFRKVGNINGA 633
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 102/219 (46%), Gaps = 9/219 (4%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
E+A +F +M +V+ FN L+GA V ++ D V L++ + K I D+ S+
Sbjct: 62 LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERK-QIRCDIYSFT 120
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
+IK F L A + ++ K G+ D++TF TLL G + R ++A ++ +
Sbjct: 121 ILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI--- 177
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
RP+V ++ ++GL E + +A+ L+ M + PD T+ + G G+ A
Sbjct: 178 -CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSA 236
Query: 288 KRWYNK----SGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
K S N I+ ++ +C+ G + NL
Sbjct: 237 LNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNL 275
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 79/153 (51%), Gaps = 1/153 (0%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
F A ++++EMP R +++++++ + DE +F + K P++V++N
Sbjct: 525 FLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSK-SFSPNVVTFN 583
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
T+I + G +D L EM ++GI D I + TL+ GF G A I++ M++
Sbjct: 584 TLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISS 643
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMR 260
V P+ + L G +++ ++A+ ++ +++
Sbjct: 644 GVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 676
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 66/156 (42%), Gaps = 7/156 (4%)
Query: 207 GFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINP 266
G Y DA ++ M+ P+V +N + + ++ + L +M K+I
Sbjct: 55 GSYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRC 114
Query: 267 DVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLC 323
D+++F LIK F + L A + K G + F L+ +C + A +L
Sbjct: 115 DIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDL- 173
Query: 324 KRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
F + C D +++ L +E RV EA L++
Sbjct: 174 ---FHQICRPDVLTFTTLMNGLCREGRVVEAVALLD 206
>gi|255660910|gb|ACU25624.1| pentatricopeptide repeat-containing protein [Mulguraea scoparia]
Length = 484
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 142/320 (44%), Gaps = 34/320 (10%)
Query: 73 FRWIEE--ILEHQKQYK---------------------DISKEGFT------ARLIALYG 103
FRW+E + EH ++ D+ K+G +I YG
Sbjct: 32 FRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYG 91
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K + + + K+F +M E+T+ S++AL + ++ F + + GIEP
Sbjct: 92 KQGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRGRYMMAKRYFNKMLSE-GIEPTR 150
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
++ +I F G +++AN +M+ + I D++T+NT++ G+Y + +AEK +
Sbjct: 151 XTFXVLIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKXEEAEKYFVE 210
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M N+ P V +Y + G Q AL LV EM+ I P+ + L+ G N
Sbjct: 211 MKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAIXYSTLLPGLCNAEK 270
Query: 284 LEEA----KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQ 339
+ EA K +K + +IF L+ C+ G+LD A ++ K +
Sbjct: 271 MSEARSILKEMMDKYLAPTDNSIFMRLITSQCKSGNLDAASDVLKAMIRLSVPTEAGHYG 330
Query: 340 LVVDRLAKELRVEEAKELVE 359
++++ K + ++A +L++
Sbjct: 331 VLIENFCKAGQYDQAVKLLD 350
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 99/234 (42%), Gaps = 46/234 (19%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I Y + E A K F EM GRN E TV+++ L+ V+ + D+ L +++
Sbjct: 191 MINGYYRVKKXEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEM-KGF 249
Query: 158 GIEPDLVSYNT----------------IIKAFVDK--------------------GSLDS 181
GI+P+ + Y+T I+K +DK G+LD+
Sbjct: 250 GIKPNAIXYSTLLPGLCNAEKMSEARSILKEMMDKYLAPTDNSIFMRLITSQCKSGNLDA 309
Query: 182 ANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV--RPNV------ 233
A+ +L M + + + + L+ F G++ A K+ + ++ ++ RP
Sbjct: 310 ASDVLKAMIRLSVPTEAGHYGVLIENFCKAGQYDQAVKLLDKLIEKDIILRPQSTLHLEP 369
Query: 234 RSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+YN ++ L Q KA LV ++ + D LI+G EG+ + A
Sbjct: 370 SAYNPMIEYLCNNGQAAKAETLVRQLLKWGVQ-DPTALNTLIRGHSQEGSPDSA 422
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 41/215 (19%), Positives = 94/215 (43%), Gaps = 17/215 (7%)
Query: 37 LKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTA 96
LK ++DK+ +D I+ + + ++L+ + ++ G
Sbjct: 278 LKEMMDKYLAPTD-------NSIFMRLITSQCKSGNLDAASDVLKAMIRLSVPTEAGHYG 330
Query: 97 RLIALYGKAAMFENARKVFDEM--------PGRNCEQTVLSFNALLGACVNSKKFDEVDG 148
LI + KA ++ A K+ D++ P ++N ++ N+ + + +
Sbjct: 331 VLIENFCKAGQYDQAVKLLDKLIEKDIILRPQSTLHLEPSAYNPMIEYLCNNGQAAKAET 390
Query: 149 LFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
L + L K G++ D + NT+I+ +GS DSA LL M ++ + + +++L+ +
Sbjct: 391 LVRQLL-KWGVQ-DPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYDSLVQSY 448
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
ADA+ ++M+ + P+ + + ++ L
Sbjct: 449 LKKNEPADAKAALDSMIENDHLPDSALFRSVMESL 483
>gi|297743996|emb|CBI36966.3| unnamed protein product [Vitis vinifera]
Length = 730
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 127/258 (49%), Gaps = 4/258 (1%)
Query: 102 YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEP 161
+ +AA + +F EM R EQ + ++N LL A + D + ++P K I P
Sbjct: 187 FNRAAEIFDEMNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRK-HIMP 245
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
++V+Y+T+I + G LD A L EM+ I LD +++NTLL + GRF +A +
Sbjct: 246 NVVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVC 305
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
+ M + ++ + +YNA L G + + ++ + EM+++ I P++ T+ LI +
Sbjct: 306 KEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKG 365
Query: 282 GNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPL 338
G +EA R + K+G + ++ L+ +C+ G ++ A + E +
Sbjct: 366 GLYQEAMEVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTY 425
Query: 339 QLVVDRLAKELRVEEAKE 356
++D + VE+A E
Sbjct: 426 NSIIDAFGRSGIVEDATE 443
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 123/244 (50%), Gaps = 14/244 (5%)
Query: 59 IYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEM 118
++ G + A A+ EE L H ++ K G + L+ + ++ + E+
Sbjct: 100 MHFGRPKTAAAARHTSTAEEALRHAIRFASDDK-GIDSVLLNFESRLCGSDDYTFLLREL 158
Query: 119 PGRN---CEQTVLSFNALLGACVN--------SKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
R + ++++NA++ AC ++ FDE++ LF ++ ++ GIE D+ +YN
Sbjct: 159 GNRGDSGLKPNLVTYNAVIDACGKGGVDFNRAAEIFDEMN-LFSEMLYR-GIEQDIFTYN 216
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
T++ A G +D A ++ EM +K I +++T++T++ G+ GR +A ++ M
Sbjct: 217 TLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFA 276
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
++ + SYN L A + ++AL + EM S I D T+ AL+ G+ +G EE
Sbjct: 277 SIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEV 336
Query: 288 KRWY 291
KR +
Sbjct: 337 KRVF 340
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 105/216 (48%), Gaps = 3/216 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I Y KA + A +F+EM + +S+N LL +F+E + K++
Sbjct: 253 VIDGYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESS- 311
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
GI+ D V+YN ++ + +G + + EM+ + I +L+T++TL+ + G + +A
Sbjct: 312 GIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEA 371
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+++ ++ +V Y+A +D L + A+ + EM + I P+V T+ ++I
Sbjct: 372 MEVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDA 431
Query: 278 FVNEGNLEEAKRWYNKSGCGMNKAIFKLLVPFVCEK 313
F G +E+A ++ G + I K+ EK
Sbjct: 432 FGRSGIVEDATE--SEVGDKEDNQIIKIFGQLAAEK 465
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 101/231 (43%), Gaps = 42/231 (18%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+++Y K FE A V EM ++ +++NALLG K++EV +F+++ +
Sbjct: 288 LLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAER 347
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
I P+L++Y+T+I + G A + E +K G++ D++ ++ L+ NG A
Sbjct: 348 -IFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYSALIDALCKNGLVESA 406
Query: 218 EKIWETMVNMNVRPNVRSYNARLDG-----------------------------LAIEK- 247
+ M +RPNV +YN+ +D LA EK
Sbjct: 407 VSFLDEMTKEGIRPNVVTYNSIIDAFGRSGIVEDATESEVGDKEDNQIIKIFGQLAAEKT 466
Query: 248 -QTKKA----------LELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
KK L + +M +I P+V TF A++ + E+A
Sbjct: 467 CHAKKENRGRQEILCILAVFHKMHELDIKPNVVTFSAILNACSRCNSFEDA 517
>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 643
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 121/224 (54%), Gaps = 8/224 (3%)
Query: 66 RLANAKR-FRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCE 124
R NAK+ F +E++ Q ++ +T+ LI + K + A +F+++
Sbjct: 423 RCGNAKKAFNLHDEMISKGIQPTLVT---YTS-LIYVLSKRNRMKAADDLFEKIIREGAS 478
Query: 125 QTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSAN 183
++ FNAL+ G C N D L K++ K I PD V+YNT+++ +G ++ A
Sbjct: 479 PDLIMFNALIDGHCANGN-LDRAFALLKEM-DKRNIVPDEVTYNTLMQGRCREGKVEEAR 536
Query: 184 TLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
LL EM+++GIR D I++NTL+ G+ G DA I + M+++ P + +YNA + GL
Sbjct: 537 ELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGL 596
Query: 244 AIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+Q A EL+ EM SK I PD T+++LI+G + EA
Sbjct: 597 CKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGKVDDSSEA 640
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 122/261 (46%), Gaps = 8/261 (3%)
Query: 116 DEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVD 175
DEM R TV ++N L+ A K DE DG+ KD+ GI PD ++YN +I +
Sbjct: 365 DEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDS-GIVPDSITYNILINGYCR 423
Query: 176 KGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRS 235
G+ A L EM KGI+ L+T+ +L+ R A+ ++E ++ P++
Sbjct: 424 CGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIM 483
Query: 236 YNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK---RWYN 292
+NA +DG +A L+ EM + I PD T+ L++G EG +EEA+ +
Sbjct: 484 FNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMK 543
Query: 293 KSGCGMNKAIFKLLVPFVCEKGDLDFAFN----LCKRTFSERCLVDQAPLQLVVDRLAKE 348
+ G + + L+ ++GD++ AF + F+ L A +Q + +
Sbjct: 544 RRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGD 603
Query: 349 LRVEEAKELVELGKTNSYCRY 369
L E KE+V G T Y
Sbjct: 604 LAEELLKEMVSKGITPDDSTY 624
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 123/271 (45%), Gaps = 5/271 (1%)
Query: 92 EGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFK 151
E F A +++L+ K E ++ EM + TV +FN ++ K +
Sbjct: 202 ETFNA-MLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIG 260
Query: 152 DLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSN 211
+ LG++P++V+YNT+I + +G ++ A +L M+ +G+ D T+ +L+ G
Sbjct: 261 SM-ENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKG 319
Query: 212 GRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTF 271
G+ +A I E M + + P +YN +DG + KA EM + I P V T+
Sbjct: 320 GKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTY 379
Query: 272 YALIKGFVNEGNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFS 328
LI EG ++EA + SG + + +L+ C G+ AFNL S
Sbjct: 380 NLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMIS 439
Query: 329 ERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ ++ L+K R++ A +L E
Sbjct: 440 KGIQPTLVTYTSLIYVLSKRNRMKAADDLFE 470
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 124/278 (44%), Gaps = 21/278 (7%)
Query: 111 ARKVFDEMP---GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
+ VF E+ R ++ + F+ L+ AC K+ D+ F D+ + G+ P + ++N
Sbjct: 147 VKDVFHELAITRDRLGTKSSIVFDMLIRACCELKRGDDAFECF-DMMKEKGVVPKIETFN 205
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
++ F+ ++ L EM + I+ + TFN ++ G+ A+ +M N+
Sbjct: 206 AMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENL 265
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
V+PNV +YN + G + + A ++ M+++ + PD +T+ +LI G G LEEA
Sbjct: 266 GVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEA 325
Query: 288 KRWYNKS---GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDR 344
K G + L+ C KGDL AF L + L++
Sbjct: 326 SGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHA 385
Query: 345 LAKELRVEEAKELV-ELGKT-------------NSYCR 368
L E +++EA ++ ++G + N YCR
Sbjct: 386 LFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCR 423
>gi|226492629|ref|NP_001143148.1| uncharacterized protein LOC100275629 [Zea mays]
gi|195615066|gb|ACG29363.1| hypothetical protein [Zea mays]
Length = 478
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 130/264 (49%), Gaps = 16/264 (6%)
Query: 105 AAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLV 164
AA E+A ++F +P + V S+N ++ + E +F ++ K I P +V
Sbjct: 179 AAHIEDALRLFRNIP----KPDVCSYNTIIDGLCRRGRLAEALDMFSEMVGKC-IAPTVV 233
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
+Y T+I +G D A + +EM ++G+ +L+T+++L+ G GR A ++ + M
Sbjct: 234 TYTTVIHWLAREGCFDDALKIFHEMGRRGVSPNLVTYSSLIDGLCKGGRATSALELLDRM 293
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
V PN +Y++ +DGL E +A+E++ MR + PD F LI G + G
Sbjct: 294 VKEKKLPNTITYSSVIDGLCKEHMLSEAMEVLDRMRLQGRKPDAGLFGKLIVGLCDAGRA 353
Query: 285 EEAKRWYNK---SGCGMNKAIFKL-------LVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
EA + ++ +G N+ + L ++ +C+KG+L AF + + T + D
Sbjct: 354 VEAANYLDEMVLAGIEPNRVTWSLHARINNTVLTALCDKGELGRAFQVYQSTRTRSISTD 413
Query: 335 QAPLQLVVDRLAKELRVEEAKELV 358
L+V+ +K +E+A +V
Sbjct: 414 PTTFHLLVESFSKN-NIEKAARVV 436
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 99/216 (45%), Gaps = 9/216 (4%)
Query: 149 LFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
LF+ P L + SYN ++ A V L A +LL +M G T+N LL
Sbjct: 115 LFRSAPSDLALPHSARSYNAVLAALVAHSHLPLARSLLADMRAAGFAPTAATYNVLLKAH 174
Query: 209 YSN--GRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINP 266
S+ DA +++ + +P+V SYN +DGL + +AL++ EM K I P
Sbjct: 175 CSDAAAHIEDALRLFRNI----PKPDVCSYNTIIDGLCRRGRLAEALDMFSEMVGKCIAP 230
Query: 267 DVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLC 323
V T+ +I EG ++A + ++ + G N + L+ +C+ G A L
Sbjct: 231 TVVTYTTVIHWLAREGCFDDALKIFHEMGRRGVSPNLVTYSSLIDGLCKGGRATSALELL 290
Query: 324 KRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
R E+ L + V+D L KE + EA E+++
Sbjct: 291 DRMVKEKKLPNTITYSSVIDGLCKEHMLSEAMEVLD 326
>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 130/266 (48%), Gaps = 4/266 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+ + K + + VF M + + V+++ +L+ K+ ++ + + +
Sbjct: 273 LVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQR- 331
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ PD+ SYN +I F +D A L EM K I D++T+N+L+ G G+ + A
Sbjct: 332 GVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYA 391
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
K+ + M + V P++ +Y++ LD L Q KA+ L+ +++ + I P+++T+ LI G
Sbjct: 392 LKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDG 451
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
G LE+A + G + + +++ C KG D A L + C+ D
Sbjct: 452 LCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPD 511
Query: 335 QAPLQLVVDRLAKELRVEEAKELVEL 360
++++ L + ++A++L E+
Sbjct: 512 AVTYEIIIRSLFDKDENDKAEKLREM 537
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 117/242 (48%), Gaps = 4/242 (1%)
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL 179
G + V+ ++ ++ K ++ L+ ++ K GI P++V+Y+ +I F G L
Sbjct: 190 GNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSK-GISPNVVTYSALISGFFTVGQL 248
Query: 180 DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNAR 239
A L +M + I+ D+ TFN L+ GF +G+ + + ++ M+ ++PNV +Y +
Sbjct: 249 KDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSL 308
Query: 240 LDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY---NKSGC 296
+DG + K+ KA ++ M + +NPD+ ++ LI GF ++EA + +
Sbjct: 309 MDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHI 368
Query: 297 GMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKE 356
+ + L+ +C+ G + +A L D ++D L K +V++A
Sbjct: 369 IPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIA 428
Query: 357 LV 358
L+
Sbjct: 429 LL 430
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 104/225 (46%), Gaps = 18/225 (8%)
Query: 110 NARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL--------------PH 155
+A +F + +N + FN +LG+ V SK + V L + + PH
Sbjct: 59 DAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPVLFHFQHPH 118
Query: 156 KL-GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRF 214
+L G P+ +++ T+IK KG + A + G +LD + + TL+ G G
Sbjct: 119 QLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGET 178
Query: 215 ADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYAL 274
A + + V+PNV Y+ +DG+ +K A +L EM SK I+P+V T+ AL
Sbjct: 179 RAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSAL 238
Query: 275 IKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDL 316
I GF G L++A +NK + F +LV C+ G +
Sbjct: 239 ISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKM 283
>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 724
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 116/234 (49%), Gaps = 8/234 (3%)
Query: 93 GFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKD 152
GF LI+ + K A ++F EMP + C+ V +FN+L+ + L +D
Sbjct: 455 GFNC-LISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRD 513
Query: 153 LPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNG 212
+ + G+ + V+YNT+I AF+ +G + A L+ EM +G LD IT+N+L+ G G
Sbjct: 514 MISE-GVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAG 572
Query: 213 RFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFY 272
A ++E M+ + P+ S N ++GL ++A+E EM + PD+ TF
Sbjct: 573 EVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFN 632
Query: 273 ALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLC 323
+LI G G +E+ + K G + + L+ ++C+ G F ++ C
Sbjct: 633 SLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGG---FVYDAC 683
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 146/343 (42%), Gaps = 54/343 (15%)
Query: 77 EEILEHQKQYKDISKEGFTARLIALYG-------KAAMFENARKVFDEMPGRNCEQTVLS 129
+ I E K + GFT I YG K + A+ +F +P + T +
Sbjct: 295 DRINEAAKMVNRMLIRGFTPDDIT-YGYLMNGLCKIGRVDAAKDLFYRIP----KPTSVI 349
Query: 130 FNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEM 189
FN L+ V + D+ + D+ GI PD+ +YN++I + KG + A +L +M
Sbjct: 350 FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDM 409
Query: 190 EKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQT 249
KG + ++ ++ L+ GF G+ +A + M ++PN +N + E +
Sbjct: 410 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRI 469
Query: 250 KKALELVGEMRSKEINPDVFTFYALIKG-------------------------------- 277
+A+E+ EM K PDV+TF +LI G
Sbjct: 470 PEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTL 529
Query: 278 ---FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERC 331
F+ G ++EA++ N+ G +++ + L+ +C G++D A +L ++ +
Sbjct: 530 INAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGL 589
Query: 332 LVDQAPLQLVVDRLAKELRVEEA----KELVELGKTNSYCRYN 370
+ ++++ L + VEEA KE+V G T +N
Sbjct: 590 VPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFN 632
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 115/260 (44%), Gaps = 4/260 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI Y K + A +V +M + C+ V S+ L+ K DE L ++
Sbjct: 389 LIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSAD- 447
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++P+ V +N +I AF + + A + EM +KG + D+ TFN+L+ G A
Sbjct: 448 GLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHA 507
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ M++ V N +YN ++ + K+A +LV EM + D T+ +LIKG
Sbjct: 508 LWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKG 567
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
G +++A+ + K G + +L+ +C G ++ A K D
Sbjct: 568 LCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPD 627
Query: 335 QAPLQLVVDRLAKELRVEEA 354
+++ L + R+E+
Sbjct: 628 IVTFNSLINGLCRAGRIEDG 647
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 117/270 (43%), Gaps = 7/270 (2%)
Query: 53 FRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENAR 112
+R + +Y + +L + F+ I+ +L K + KE ++ Y KA
Sbjct: 101 YRHSFDVYQVLIGKLGSNGEFKTIDRLLMQMKDEGIVFKESLFISIMRDYDKAGFPGQTT 160
Query: 113 KVFDEMPGRN---CEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTI 169
++ EM RN CE T S+N +L V+ +F D+ + I P L ++ +
Sbjct: 161 RLMLEM--RNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSR-KIPPTLFTFGVV 217
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
+KA +DSA ++L +M K G + + + TL+ R +A ++ E M M
Sbjct: 218 MKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGC 277
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
P+ ++N + GL + +A ++V M + PD T+ L+ G G ++ AK
Sbjct: 278 VPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKD 337
Query: 290 WYNKSGCGMNKAIFKLLVPFVCEKGDLDFA 319
+ + IF L+ G LD A
Sbjct: 338 LFYRIP-KPTSVIFNTLIHGFVTHGRLDDA 366
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 91/210 (43%), Gaps = 7/210 (3%)
Query: 41 VDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTA---- 96
VD+ K + L R + G+ TV F EI E +K ++ +G
Sbjct: 501 VDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEIT 560
Query: 97 --RLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLP 154
LI +A + AR +F++M + +S N L+ S +E K++
Sbjct: 561 YNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMV 620
Query: 155 HKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRF 214
+ G PD+V++N++I G ++ T+ +++ +GI D +T+NTL+ G
Sbjct: 621 LR-GSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFV 679
Query: 215 ADAEKIWETMVNMNVRPNVRSYNARLDGLA 244
DA + + + PN R+++ L L
Sbjct: 680 YDACLLLDEGIEDGFVPNDRTWSILLQSLV 709
>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
Length = 683
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 118/234 (50%), Gaps = 4/234 (1%)
Query: 127 VLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLL 186
V+ ++A++ + + LF ++ K GI P++V+YN +I F G +A LL
Sbjct: 253 VVIYSAIIDGLCKDGRHSDSHNLFIEMQDK-GIFPNIVTYNCMIGGFCISGRWSAAQRLL 311
Query: 187 YEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIE 246
EM ++ I +++T+N L+ F G+F +A ++++ M+ + PN +YN+ +DG +
Sbjct: 312 QEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQ 371
Query: 247 KQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIF 303
+ A ++ M +K +PDVFTF LI G+ +++ + + G N +
Sbjct: 372 DRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTY 431
Query: 304 KLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
L+ C GDL+ A +L ++ S D ++D L ++++A E+
Sbjct: 432 NTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEM 485
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 122/256 (47%), Gaps = 22/256 (8%)
Query: 56 NTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFT-ARLIALYGKAAMFENARKV 114
NT Y + R E++ + K S + FT LI Y A ++ ++
Sbjct: 357 NTITYNSMIDGFCKQDRLDAAEDMF-YLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMEL 415
Query: 115 FDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKL---GIEPDLVSYNTII 170
EMP R +++N L+ G C+ +++ DL ++ G+ PD+V+ NT++
Sbjct: 416 LHEMPRRGLVANTVTYNTLIHGFCL----VGDLNAAL-DLSQQMISSGVCPDIVTCNTLL 470
Query: 171 KAFVDKGSLDSANTLLYEMEKK-----------GIRLDLITFNTLLLGFYSNGRFADAEK 219
D G L A + M+K G+ D++T+N L+ G + G+F +AE+
Sbjct: 471 DGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEE 530
Query: 220 IWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFV 279
++E M + + P+ +Y++ +DGL + + +A ++ M SK +P+V TF LI G+
Sbjct: 531 LYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYC 590
Query: 280 NEGNLEEAKRWYNKSG 295
G +++ + + G
Sbjct: 591 KAGRVDDGLELFCEMG 606
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 114/241 (47%), Gaps = 5/241 (2%)
Query: 123 CEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSA 182
C VL+F L+ + E L + G++PD ++Y T + G SA
Sbjct: 178 CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVEN-GLQPDQITYGTFVDGMCKMGDTVSA 236
Query: 183 NTLLYEMEK-KGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLD 241
LL +ME+ I+ +++ ++ ++ G +GR +D+ ++ M + + PN+ +YN +
Sbjct: 237 LNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIG 296
Query: 242 GLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGM 298
G I + A L+ EM ++I+P+V T+ ALI FV EG EA Y++ G
Sbjct: 297 GFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIP 356
Query: 299 NKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
N + ++ C++ LD A ++ ++ C D ++D R+++ EL+
Sbjct: 357 NTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELL 416
Query: 359 E 359
Sbjct: 417 H 417
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 119/273 (43%), Gaps = 13/273 (4%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
S+I G K++ L D F + G + +T + AKR E+L +
Sbjct: 363 SMIDGFCKQDRLDAAEDMFYLMATKG-CSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPR 421
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFD 144
++ LI + A + +M +++ N LL G C N K D
Sbjct: 422 RGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKD 481
Query: 145 EVDGLFK---------DLPHKL-GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGI 194
++ +FK D H G+EPD+++YN +I +++G A L EM +GI
Sbjct: 482 ALE-MFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGI 540
Query: 195 RLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALE 254
D IT+++++ G R +A +++ +M + + PNV ++N ++G + LE
Sbjct: 541 VPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLE 600
Query: 255 LVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
L EM + I D + LI GF GN+ A
Sbjct: 601 LFCEMGRRGIVADAIIYITLIYGFRKVGNINGA 633
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 102/219 (46%), Gaps = 9/219 (4%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
E+A +F +M +V+ FN L+GA V ++ D V L++ + K I D+ S+
Sbjct: 62 LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERK-QIRCDIYSFT 120
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
+IK F L A + ++ K G+ D++TF TLL G + R ++A ++ +
Sbjct: 121 ILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI--- 177
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
RP+V ++ ++GL E + +A+ L+ M + PD T+ + G G+ A
Sbjct: 178 -CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSA 236
Query: 288 KRWYNK----SGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
K S N I+ ++ +C+ G + NL
Sbjct: 237 LNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNL 275
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 81/157 (51%), Gaps = 1/157 (0%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
F A ++++EMP R +++++++ + DE +F + K P++V++N
Sbjct: 525 FLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSK-SFSPNVVTFN 583
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
T+I + G +D L EM ++GI D I + TL+ GF G A I++ M++
Sbjct: 584 TLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISS 643
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
V P+ + L G +++ ++A+ ++ +++ ++
Sbjct: 644 GVYPDTITIRNMLTGFWSKEELERAVAMLEDLQRYQL 680
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 66/156 (42%), Gaps = 7/156 (4%)
Query: 207 GFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINP 266
G Y DA ++ M+ P+V +N + + ++ + L +M K+I
Sbjct: 55 GSYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRC 114
Query: 267 DVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLC 323
D+++F LIK F + L A + K G + F L+ +C + A +L
Sbjct: 115 DIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDL- 173
Query: 324 KRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
F + C D +++ L +E RV EA L++
Sbjct: 174 ---FHQICRPDVLTFTTLMNGLCREGRVVEAVALLD 206
>gi|147776740|emb|CAN72416.1| hypothetical protein VITISV_027905 [Vitis vinifera]
Length = 422
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 135/290 (46%), Gaps = 5/290 (1%)
Query: 44 FKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYG 103
F +S F+ + + + +L A++F ++++L K + + +I +YG
Sbjct: 34 FDLASLQPNFKHSYSSFHILILKLGWARQFSLMQDLLMRLKSEQYSINPSLFSDIIEIYG 93
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKF-DEVDGLFKDLPHKLGIEPD 162
+A + + A K F M + + N LL V+ + + LFK H+ G+ PD
Sbjct: 94 EANLPDQALKTFHSMLQFHSKPLPKHLNXLLQLLVSHRNYIRPAFDLFKS-AHRYGVSPD 152
Query: 163 LVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWE 222
SYN ++ AF G L A TL +M K+ + D+ ++ L+ G + A + E
Sbjct: 153 TKSYNILMSAFCFNGDLSIAYTLFNQMFKRDVAPDVESYRILMQGLCRKSQVNRAVDLLE 212
Query: 223 TMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEG 282
M+N P+ SY L+ L +K+ K+A +L+ M+ K NPD+ + +I GF EG
Sbjct: 213 DMLNKGYVPDALSYTTLLNSLCRKKKLKEAYKLLCRMKVKGCNPDIVHYNTVILGFCREG 272
Query: 283 NLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSE 329
+A + +GC N + LV +C++G D A N + S+
Sbjct: 273 RXLDACKVLEDMPSNGCSPNLMSYGTLVSGLCDQGLYDEAKNYVEEMLSK 322
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 105/206 (50%), Gaps = 6/206 (2%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTI 169
A +F++M R+ V S+ L+ G C S+ VD L +D+ +K G PD +SY T+
Sbjct: 172 AYTLFNQMFKRDVAPDVESYRILMQGLCRKSQVNRAVD-LLEDMLNK-GYVPDALSYTTL 229
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
+ + K L A LL M+ KG D++ +NT++LGF GR DA K+ E M +
Sbjct: 230 LNSLCRKKKLKEAYKLLCRMKVKGCNPDIVHYNTVILGFCREGRXLDACKVLEDMPSNGC 289
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
PN+ SY + GL + +A V EM SK +P F+ALI GF N G LEEA
Sbjct: 290 SPNLMSYGTLVSGLCDQGLYDEAKNYVEEMLSKGFSPHFSVFHALINGFCNVGKLEEACE 349
Query: 290 WYN---KSGCGMNKAIFKLLVPFVCE 312
+ G + + ++P +CE
Sbjct: 350 VLXEMLRHGEAXHTETWVAIIPRICE 375
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 78/176 (44%), Gaps = 4/176 (2%)
Query: 93 GFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFN-ALLGACVNSKKFDEVDGLFK 151
+T L +L K + E A K+ M + C ++ +N +LG C + D L +
Sbjct: 225 SYTTLLNSLCRKKKLKE-AYKLLCRMKVKGCNPDIVHYNTVILGFCREGRXLDACKVL-E 282
Query: 152 DLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSN 211
D+P G P+L+SY T++ D+G D A + EM KG F+ L+ GF +
Sbjct: 283 DMPSN-GCSPNLMSYGTLVSGLCDQGLYDEAKNYVEEMLSKGFSPHFSVFHALINGFCNV 341
Query: 212 GRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPD 267
G+ +A ++ M+ + ++ A + + + + + E EI P+
Sbjct: 342 GKLEEACEVLXEMLRHGEAXHTETWVAIIPRICEVDKLVRMENIFDEXLKLEITPN 397
>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 839
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 107/217 (49%), Gaps = 2/217 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I +Y K NA ++ + M G + ++ L+ K + LF ++
Sbjct: 453 IIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEH- 511
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
GI P++V+YN II ++ +D A L ++M + G T+N ++ GF R ++A
Sbjct: 512 GISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEA 571
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
E MV + PNV +Y + +DGL +T A ++ EM+ ++ P++ T+ +LI G
Sbjct: 572 ENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDG 631
Query: 278 FVNEGNLEEAKRWYNKSGCGMNKAIFKLLVPFVCEKG 314
EG E+A+R + GC N + LV +C KG
Sbjct: 632 LCQEGQAEDAERLLD-DGCEPNVDTYTTLVRGLCGKG 667
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 98/200 (49%), Gaps = 2/200 (1%)
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
F+ LI L GK M R V+ EM + +FNA++ N K E + + +
Sbjct: 170 FSTLLIQL-GKFDMDGLGRDVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHI 228
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
H G PD +Y ++I G+LD A + M K G + +T++ L+ G S GR
Sbjct: 229 FH-YGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGR 287
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
+A + E M++ + P V +Y + L ++ +A++L+G+M+ + P+V T+ A
Sbjct: 288 LEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTA 347
Query: 274 LIKGFVNEGNLEEAKRWYNK 293
LI G +G E A Y+K
Sbjct: 348 LISGLSRDGKFEVAIGVYHK 367
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 115/257 (44%), Gaps = 4/257 (1%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
FE A +F+ M + ++N ++ + + +F + K G P++++YN
Sbjct: 393 FETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQML-KAGPSPNVITYN 451
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
II + +G +++A LL M+ G++LD T+ L+ GF G+ A ++ MV
Sbjct: 452 IIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEH 511
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+ PNV +YNA ++G + AL L +M P T+ +I GF + EA
Sbjct: 512 GISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEA 571
Query: 288 KRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDR 344
+ + K G N + + +C+ G AF + + ++D
Sbjct: 572 ENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDG 631
Query: 345 LAKELRVEEAKELVELG 361
L +E + E+A+ L++ G
Sbjct: 632 LCQEGQAEDAERLLDDG 648
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 139/337 (41%), Gaps = 13/337 (3%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQ-K 84
S+I G K NL + F + G N+ Y+ + L + R ++LE
Sbjct: 242 SLIIGHCKNGNLDLAFEMFDRMVKDG-CDPNSVTYSALINGLCSEGRLEEAMDMLEEMID 300
Query: 85 QYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
+ + + +T +++L E A K+ +M R C V ++ AL+ KF+
Sbjct: 301 KGIEPTVHAYTIPIVSLCDAGRSCE-AVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFE 359
Query: 145 EVDGLFKDLPHKL---GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITF 201
G++ HK+ G+ P V+Y+ +I +G ++A T+ M + T+
Sbjct: 360 VAIGVY----HKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETY 415
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS 261
N ++ GF S G A I++ M+ PNV +YN + + A+ L+ M+
Sbjct: 416 NVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKG 475
Query: 262 KEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDF 318
+ D +T+ LI GF G LE A +N + G N + ++ +D
Sbjct: 476 NGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDD 535
Query: 319 AFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAK 355
A L + + +++ +K R+ EA+
Sbjct: 536 ALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAE 572
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 81/172 (47%), Gaps = 5/172 (2%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A K+F EM R+ + ++++L+ + ++ + L D G EP++ +Y T++
Sbjct: 606 AFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDD-----GCEPNVDTYTTLV 660
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
+ KG A+ L+ M+KKG++ + LL+G N A KI+++MV +
Sbjct: 661 RGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQ 720
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEG 282
P + Y A + L +KA + M K N D + L+ G + EG
Sbjct: 721 PCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEG 772
>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
Length = 698
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 147/328 (44%), Gaps = 27/328 (8%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYG-------KAAMFENAR 112
YT V LA K+ + ++E I+ G T IA Y K E A
Sbjct: 262 YTAIVNWLAKNKKIQEAVALME------KITANGCTPT-IATYNALLNGLCKMGRLEEAI 314
Query: 113 KVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKA 172
+ ++ C V+++ +L+ K+ E LFK++ + G+ D V Y +I+
Sbjct: 315 DLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASR-GLALDTVCYTALIRG 373
Query: 173 FVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPN 232
+ G + A+++ M G D++T +T++ G GR A +I+++M + PN
Sbjct: 374 LLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPN 433
Query: 233 VRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN 292
Y+A + GL ++ ALE++ +M+ PD T+ LI G G++E A+ +++
Sbjct: 434 EVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFD 493
Query: 293 ---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKEL 349
++GC + + +L+ +C+ G+ D A + S R + +VD L K
Sbjct: 494 EMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSRFVYSS-----LVDGLCKSG 548
Query: 350 RVEEA----KELVELGKTNSYCRYNLKF 373
++E E+ G NS R L F
Sbjct: 549 KLEGGCMLFHEMERSGVANSQTRTRLIF 576
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 118/293 (40%), Gaps = 43/293 (14%)
Query: 121 RNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLD 180
R+ + +F+ L+ V + + L ++ G D+ +Y I+ +
Sbjct: 218 RSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTN-GCTIDIHTYTAIVNWLAKNKKIQ 276
Query: 181 SANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARL 240
A L+ ++ G + T+N LL G GR +A + +V+ P+V +Y + +
Sbjct: 277 EAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLI 336
Query: 241 DGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY---NKSGC- 296
DGL EK++ +A +L EM S+ + D + ALI+G + G + +A Y GC
Sbjct: 337 DGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCV 396
Query: 297 -----------GMNKA-----------------------IFKLLVPFVCEKGDLDFAFNL 322
G++KA ++ L+ +C+ +D A +
Sbjct: 397 PDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEM 456
Query: 323 CKRTFSERCLVDQAPLQLVVDRLAKELRVEEAK----ELVELGKTNSYCRYNL 371
+ C D +++D L K VE A+ E++E G YN+
Sbjct: 457 LAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNI 509
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/266 (18%), Positives = 108/266 (40%), Gaps = 39/266 (14%)
Query: 127 VLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLL 186
V ++N L+ +++ +E + +++ G+ P L ++N ++ G + +A
Sbjct: 154 VETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDH- 212
Query: 187 YEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIE 246
+E ++ + + TF+ L+ G G A + + ++ +Y A ++ LA
Sbjct: 213 FEAVRRSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKN 272
Query: 247 KQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGC------- 296
K+ ++A+ L+ ++ + P + T+ AL+ G G LEEA K +GC
Sbjct: 273 KKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTY 332
Query: 297 ----------------------------GMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFS 328
++ + L+ + + G + A ++ K S
Sbjct: 333 TSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTS 392
Query: 329 ERCLVDQAPLQLVVDRLAKELRVEEA 354
C+ D L ++D L+K R+ A
Sbjct: 393 HGCVPDVVTLSTMIDGLSKAGRIGAA 418
>gi|255660792|gb|ACU25565.1| pentatricopeptide repeat-containing protein [Verbena bonariensis]
Length = 418
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 110/207 (53%), Gaps = 4/207 (1%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A+ VFD + +V+SFN L+ + +E L K+ G++PD+ +Y+ +I
Sbjct: 155 AQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRL-KNAMQASGVQPDVYTYSVLI 213
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
+ +D AN L EM KG+ + +TF TL+ G NGR A +I++ M++ ++
Sbjct: 214 NGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLS 273
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA--- 287
P++ +YN + GL + K+A +L+ EM K + PD FT+ LI G EG+LE A
Sbjct: 274 PDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLETAFEY 333
Query: 288 KRWYNKSGCGMNKAIFKLLVPFVCEKG 314
++ K ++ + L+ +C++G
Sbjct: 334 RKRMIKENIRLDDVAYTALISGLCQEG 360
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 82/173 (47%), Gaps = 1/173 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K + A +++ +M ++ ++++N L+ + L ++ K
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMK- 305
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD +Y T+I +G L++A M K+ IRLD + + L+ G GR DA
Sbjct: 306 GLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDA 365
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
EK+ M+++ ++P + +Y ++ + +L+ EM+ P V T
Sbjct: 366 EKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYKPSVVT 418
>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 657
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 131/282 (46%), Gaps = 8/282 (2%)
Query: 52 RFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFT-ARLIALYGKAAMFEN 110
RF +Y + L + ++ E++ + K IS + + LI + E
Sbjct: 240 RFEPVVSVYNALINGLCKERDYKGGVELMSEMVE-KGISPNVISYSTLINELSNSGQIEL 298
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGAC-VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTI 169
A + +M R C + + ++L+ C V FD +D ++ + G++P++V+YNT+
Sbjct: 299 AFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALD-MWNQMIRGFGLQPNVVAYNTL 357
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
++ F G++D A ++ ME+ G ++ T+ +L+ GF G A IW M+
Sbjct: 358 VQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGC 417
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
PNV Y + ++ L + K+A L+ M + P V TF A IKG + G L+ A++
Sbjct: 418 CPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEK 477
Query: 290 WY----NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTF 327
+ + C N + L+ + + ++ A+ L + F
Sbjct: 478 VFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIF 519
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/386 (23%), Positives = 169/386 (43%), Gaps = 48/386 (12%)
Query: 26 SVIRGIYKENNL-KRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQK 84
SVI +Y++ L +R V+ F + + G + IY + L R + I +
Sbjct: 115 SVI-SVYRQVGLAERAVEMFYRIKEFG-CDPSVKIYNHVLDTLLGENRIQMIYMV----- 167
Query: 85 QYKDISKEGFTAR------LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACV 138
Y+D+ ++GF L+ K + A+K+ EM + C +S+ ++ +
Sbjct: 168 -YRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMC 226
Query: 139 N----------SKKFDEV--------DGLFKDLPHKLGIE-----------PDLVSYNTI 169
+++F+ V +GL K+ +K G+E P+++SY+T+
Sbjct: 227 EVGMVKEGRQLAERFEPVVSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTL 286
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMV-NMN 228
I + G ++ A +LL +M K+G ++ T ++L+ G + G DA +W M+
Sbjct: 287 INELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFG 346
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
++PNV +YN + G KA+ + M +P++ T+ +LI GF G+LE A
Sbjct: 347 LQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAV 406
Query: 289 RWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRL 345
+NK SGC N ++ +V +C A +L + E C + L
Sbjct: 407 YIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGL 466
Query: 346 AKELRVEEAKELVELGKTNSYCRYNL 371
R++ A+++ + C N+
Sbjct: 467 CDAGRLDWAEKVFRQMEQQYRCPPNI 492
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 125/262 (47%), Gaps = 6/262 (2%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
+V++ + +E+ + + FK ++ F+ + +++LA + ++ +L+ K
Sbjct: 44 AVLKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKL 103
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
E +I++Y + + E A ++F + C+ +V +N +L + +
Sbjct: 104 QGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQM 163
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
+ +++D+ G EP++ +YN ++KA +D A LL EM KG + +++ T++
Sbjct: 164 IYMVYRDMKRD-GFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVI 222
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEIN 265
G + ++ E P V YNA ++GL E+ K +EL+ EM K I+
Sbjct: 223 SSMCEVGMVKEGRQLAERF-----EPVVSVYNALINGLCKERDYKGGVELMSEMVEKGIS 277
Query: 266 PDVFTFYALIKGFVNEGNLEEA 287
P+V ++ LI N G +E A
Sbjct: 278 PNVISYSTLINELSNSGQIELA 299
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 88/207 (42%), Gaps = 36/207 (17%)
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
+T+ + AL + + F+ A + + M NC +V +FNA + ++ + D + +F+ +
Sbjct: 424 YTSMVEAL-CRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQM 482
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
+ P++V+YN ++ ++ A L E+ +G+ T+NTLL G
Sbjct: 483 EQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYNTLLHG------ 536
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
S NA L G+ AL+LVG+M +PD T
Sbjct: 537 ---------------------SCNAGLPGI--------ALQLVGKMMVNGKSPDEITMNM 567
Query: 274 LIKGFVNEGNLEEAKRWYNKSGCGMNK 300
+I + +G E A + + CG K
Sbjct: 568 IILAYCKQGKAERAVQMLDLVSCGRRK 594
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 96/229 (41%), Gaps = 21/229 (9%)
Query: 149 LFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
LFK P +++ +I+ G +DS LL +M+ +G F +++ +
Sbjct: 70 LFKHTP---------LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVY 120
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDV 268
G A +++ + P+V+ YN LD L E + + + +M+ P+V
Sbjct: 121 RQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNV 180
Query: 269 FTFYALIKGFVNEGNLEEAKRW---YNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKR 325
FT+ L+K ++ AK+ + GC N + ++ +CE G + R
Sbjct: 181 FTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEG-----R 235
Query: 326 TFSERCLVDQAPLQLVVDRLAKELR----VEEAKELVELGKTNSYCRYN 370
+ER + +++ L KE VE E+VE G + + Y+
Sbjct: 236 QLAERFEPVVSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYS 284
>gi|410109889|gb|AFV61024.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
camara]
Length = 431
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 142/299 (47%), Gaps = 14/299 (4%)
Query: 86 YKDISKEGFTARL------IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
Y++I + G+ A L + + K A+ VFD + +V+S+N L+ +
Sbjct: 130 YEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIR 189
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
DE L K G++PD+ +Y+ +I + +D AN L EM KG+ + +
Sbjct: 190 LGDLDEGFRL-KSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGV 248
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
TF TL+ G NGR A +I++ M++ ++ P++ +YN + GL + K+A +L+ EM
Sbjct: 249 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEM 308
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLE---EAKRWYNKSGCGMNKAIFKLLVPFVCEKGDL 316
K + PD FT+ LI G EG+L+ E ++ + ++ + L+ +C++G
Sbjct: 309 SMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRS 368
Query: 317 DFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA----KELVELGKTNSYCRYNL 371
A + + S D ++V+ K+ V + KE+ G S YN+
Sbjct: 369 VDAEKMLREMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNV 427
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 87/180 (48%), Gaps = 1/180 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K + A +++ +M ++ ++++N L+ + L ++ K
Sbjct: 253 LIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMK- 311
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD +Y T+I +G LD+A M ++ IRLD + + L+ G GR DA
Sbjct: 312 GLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDA 371
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
EK+ M+++ ++P+ +Y ++ + K +L+ EM+ P V T+ L+ G
Sbjct: 372 EKMLREMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMNG 431
>gi|255580313|ref|XP_002530985.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529437|gb|EEF31397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 753
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 140/304 (46%), Gaps = 6/304 (1%)
Query: 21 PKFIGSVIRGI-YKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEI 79
P F S++ + + N + + F+ G F+ + + ++ L A + I
Sbjct: 105 PHFDHSLVYNVLHAARNSEHALQFFRWVERAGLFKNDRDTHMKIIEILGRASKLNHARCI 164
Query: 80 LEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
L + E LI YGKA + + A K+F++M E+++ S++AL +
Sbjct: 165 LLDMPKKGVEWDEYMFVVLIESYGKAGIVQEAVKIFNKMNELGVERSIKSYDALFKVILR 224
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
++ +F + + GI+P +YN ++ F L++A +M+ +GI D++
Sbjct: 225 RGRYMMAKRVFNKMLND-GIQPTRHTYNIMLWGFFLSLRLETAMRFYDDMKNRGISPDVV 283
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
T+NT++ GFY + +AEK++ M N+ P V SY + G + L L+ EM
Sbjct: 284 TYNTMINGFYRFKKMEEAEKLFVEMKGKNIAPTVISYTTMIKGYVAVDRVDDGLRLLEEM 343
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLEEAK----RWYNKSGCGMNKAIFKLLVPFVCEKGD 315
+S I P+V T+ L+ G + + EAK + + +IF L+ C+ GD
Sbjct: 344 KSFNIKPNVHTYSTLLPGLCDAWKMTEAKDILIEMVARHLAPKDNSIFLRLLSCQCKAGD 403
Query: 316 LDFA 319
L A
Sbjct: 404 LRAA 407
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 80/193 (41%), Gaps = 37/193 (19%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
E A + +D+M R V+++N ++ KK +E + LF ++ K I P ++SY
Sbjct: 263 LETAMRFYDDMKNRGISPDVVTYNTMINGFYRFKKMEEAEKLFVEMKGK-NIAPTVISYT 321
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSN---------------- 211
T+IK +V +D LL EM+ I+ ++ T++TLL G
Sbjct: 322 TMIKGYVAVDRVDDGLRLLEEMKSFNIKPNVHTYSTLLPGLCDAWKMTEAKDILIEMVAR 381
Query: 212 --------------------GRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKK 251
G AE + TM+ +++ Y ++ ++ +
Sbjct: 382 HLAPKDNSIFLRLLSCQCKAGDLRAAEDVLNTMMRLHIPTEAGHYGVLIENFCKAEEYDR 441
Query: 252 ALELVGEMRSKEI 264
A++ + ++ KEI
Sbjct: 442 AVKYLDKLIEKEI 454
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 122/282 (43%), Gaps = 27/282 (9%)
Query: 70 AKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEM--------PGR 121
A R E++L + ++ G LI + KA ++ A K D++ P
Sbjct: 401 AGDLRAAEDVLNTMMRLHIPTEAGHYGVLIENFCKAEEYDRAVKYLDKLIEKEIILRPQS 460
Query: 122 NCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDS 181
E ++N ++ + + + + F+ L K G++ D +++N +I +G DS
Sbjct: 461 TLEIESNAYNPMIQYLCSHGQTGKAEIFFRQLMKK-GVQ-DPLAFNNLICGHAKEGYPDS 518
Query: 182 ANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLD 241
A + M K+G+ D + ++ + G ADA+ + M+ P+ + + ++
Sbjct: 519 AFEIFKIMGKRGVPRDADAYRLIIESYLRKGEPADAKTALDGMLEDGHVPDPSVFRSVME 578
Query: 242 GLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA---KRWYNKSGCGM 298
L + + + A ++ M K + ++ +++ + G++EEA +SG +
Sbjct: 579 SLFEDGRVQTASRVMKSMVEKGVKENMDLVGKILEALLMRGHVEEALGRIELLMQSGFHV 638
Query: 299 NKAIFKLLVPFVCEKGD-------LDFA----FNLCKRTFSE 329
N F L+ + EKG LDFA FNL +++ +
Sbjct: 639 N---FDDLLSVLSEKGKTIAALKLLDFALERDFNLDFKSYDK 677
>gi|255584314|ref|XP_002532893.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527353|gb|EEF29498.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 625
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 151/328 (46%), Gaps = 22/328 (6%)
Query: 56 NTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIAL------YGKAAMFE 109
N+ +++ V AN K + ++ EH + GF L A K + +
Sbjct: 129 NSHVFSWLVIVYANTKMKQEAIQVFEH------MMVNGFRPHLHACTVLLNSLAKDRLTD 182
Query: 110 NARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTI 169
KV+ +M E + +N L+ AC S ++ D L ++ K + PDL +YNT+
Sbjct: 183 MVWKVYKKMARIGVEANIHVYNVLIHACCKSGDVEKADNLLSEMESKC-VFPDLFTYNTL 241
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
I + KG A ++ ME++GI+ D++T+N+L+ GF GR +A ++++ + +
Sbjct: 242 ISLYCKKGMHYEALSVQDRMEREGIKPDIVTYNSLIHGFCKEGRMREAMRLFKEI--RDA 299
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
PN +Y +DG +AL L EM ++ + P V T+ ++++ G + +A +
Sbjct: 300 TPNHVTYTTLIDGYCRLNDLDQALRLREEMEAQGLYPTVVTYNSILRKLCEIGRIRDANK 359
Query: 290 WYNKSG---CGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLA 346
N+ + L+ C+ GD+ A + R +DQ + ++
Sbjct: 360 LLNEMSEKKIEPDNVTCNTLINAYCKIGDMKSALKVKNRMVEAGLKLDQFTYKALIHGFC 419
Query: 347 KELRVEEAKEL----VELGKTNSYCRYN 370
K ++ AKEL ++ G + SYC Y+
Sbjct: 420 KIREMDGAKELLLSMLDAGFSPSYCTYS 447
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 119/266 (44%), Gaps = 39/266 (14%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL---- 153
LI+LY K M A V D M + ++++N+L+ + E LFK++
Sbjct: 241 LISLYCKKGMHYEALSVQDRMEREGIKPDIVTYNSLIHGFCKEGRMREAMRLFKEIRDAT 300
Query: 154 PHKL----------------------------GIEPDLVSYNTIIKAFVDKGSLDSANTL 185
P+ + G+ P +V+YN+I++ + G + AN L
Sbjct: 301 PNHVTYTTLIDGYCRLNDLDQALRLREEMEAQGLYPTVVTYNSILRKLCEIGRIRDANKL 360
Query: 186 LYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAI 245
L EM +K I D +T NTL+ + G A K+ MV ++ + +Y A + G
Sbjct: 361 LNEMSEKKIEPDNVTCNTLINAYCKIGDMKSALKVKNRMVEAGLKLDQFTYKALIHGFCK 420
Query: 246 EKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW---YNKSGCGMNKAI 302
++ A EL+ M +P T+ L+ G+ N+ N E + + + G ++K++
Sbjct: 421 IREMDGAKELLLSMLDAGFSPSYCTYSWLVDGYCNQQNEEAVLKLPDEFVRKGLCVDKSL 480
Query: 303 FKLLVPFVCEKGDLDFAFNLCKRTFS 328
++ L+ C++ +D+A K+ FS
Sbjct: 481 YRALIRRFCKREQVDYA----KKIFS 502
>gi|410109895|gb|AFV61027.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
urticoides]
Length = 412
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 142/299 (47%), Gaps = 14/299 (4%)
Query: 86 YKDISKEGFTARL------IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
Y++I + G+ A L + + K A+ VFD + +V+S+N L+ +
Sbjct: 111 YEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIR 170
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
DE L K G++PD+ +Y+ +I + +D AN L EM KG+ + +
Sbjct: 171 LGDLDEGFRL-KSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGV 229
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
TF TL+ G NGR A +I++ M++ ++ P++ +YN + GL + K+A +L+ EM
Sbjct: 230 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEM 289
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLE---EAKRWYNKSGCGMNKAIFKLLVPFVCEKGDL 316
K + PD FT+ LI G EG+L+ E ++ + ++ + L+ +C++G
Sbjct: 290 SMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRS 349
Query: 317 DFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA----KELVELGKTNSYCRYNL 371
A + + S D ++V+ K+ V + KE+ G S YN+
Sbjct: 350 VDAEKMLREMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNV 408
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 87/180 (48%), Gaps = 1/180 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K + A +++ +M ++ ++++N L+ + L ++ K
Sbjct: 234 LIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMK- 292
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD +Y T+I +G LD+A M ++ IRLD + + L+ G GR DA
Sbjct: 293 GLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDA 352
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
EK+ M+++ ++P+ +Y ++ + K +L+ EM+ P V T+ L+ G
Sbjct: 353 EKMLREMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMNG 412
>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Brachypodium distachyon]
Length = 897
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 115/231 (49%), Gaps = 4/231 (1%)
Query: 102 YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEP 161
+ KA F+ A+KVF+EM R+C +++N ++ S +E G FK+ G+ P
Sbjct: 255 HCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFG-FKEEMVDYGLSP 313
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
D +Y ++ G L A LL EM G++ +++ + TL+ GF G+ A+A I
Sbjct: 314 DAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDIL 373
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
M++ V+PN Y+ + GL Q +A +L+ EM PD FT++ L++G
Sbjct: 374 NEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQH 433
Query: 282 GNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSE 329
+ + A N+ SG N + +++ +C+ G+ A NL + SE
Sbjct: 434 YDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISE 484
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 86/168 (51%), Gaps = 3/168 (1%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
GI PD+ +Y+T ++A D+A + EM ++ ++ +T+N ++ G +G +A
Sbjct: 240 GIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEA 299
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
E MV+ + P+ +Y A ++GL + K+A L+ EM + P+V + L+ G
Sbjct: 300 FGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDG 359
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
F+ EG EA N+ +G NK ++ L+ +C+ G L A L
Sbjct: 360 FMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKL 407
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 83/165 (50%), Gaps = 6/165 (3%)
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
K G+ PDL Y+++I ++ A LL EM K+G+ ++ +N L+ GF +G +
Sbjct: 658 KNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDIS 717
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
A ++++++ + PN +Y A +DG A +L +M + I PD F + L
Sbjct: 718 RARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLA 777
Query: 276 KGFVNEGNLEEA----KRWYNKSGCGMNKAIFKLLVPFVCEKGDL 316
G + +LE+A + +N+ + ++F LV C++G L
Sbjct: 778 TGCSDAADLEQALFLTEEMFNRGYA--HVSLFSTLVRGFCKRGRL 820
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 134/309 (43%), Gaps = 45/309 (14%)
Query: 59 IYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFT-ARLIALYGKAAMFENARKVFDE 117
+ +G + A + F + EE++++ +S + FT L+ K + A+ + DE
Sbjct: 286 MISGLCRSGAVEEAFGFKEEMVDY-----GLSPDAFTYGALMNGLCKGGRLKEAKALLDE 340
Query: 118 MPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKG 177
M + V+ + L+ + K E + ++ G++P+ + Y+ +I+ G
Sbjct: 341 MSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISA-GVQPNKIMYDNLIRGLCKIG 399
Query: 178 SLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYN 237
L A+ LL EM K G R D T++ L+ G + + A ++ M N + PN +Y
Sbjct: 400 QLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYG 459
Query: 238 ARLDGLAIEKQTKKALELVGEM------------------RSKE---------------- 263
++GL ++K+A L+ EM SKE
Sbjct: 460 IMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKA 519
Query: 264 -INPDVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFA 319
+ PD+F + +LIKG G +EEA+ +Y K G ++ + L+ C+ +L+ A
Sbjct: 520 NVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKA 579
Query: 320 FNLCKRTFS 328
L ++ +
Sbjct: 580 DQLLQQMLN 588
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 129/305 (42%), Gaps = 7/305 (2%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFT-ARLIALYGKAAMFENARKVFDEM 118
Y ++ L+ R EE Q Q + + + FT + LI Y K E A ++ +M
Sbjct: 528 YNSLIKGLSTVGRIEEAEEYYA-QVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQM 586
Query: 119 PGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGS 178
+ ++ LL S ++V + + + G +PD Y +I+ +
Sbjct: 587 LNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGS-GDKPDNHIYGIVIRNLSRSEN 645
Query: 179 LDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNA 238
++ A +L E+EK G+ DL +++L+ G A + + M + P + YNA
Sbjct: 646 MEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNA 705
Query: 239 RLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSG 295
+DG +A + + +K + P+ T+ ALI G G++ +A Y G
Sbjct: 706 LIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRG 765
Query: 296 CGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAK 355
+ ++ +L + DL+ A L + F+ R + +V K R++E +
Sbjct: 766 IAPDAFVYNVLATGCSDAADLEQALFLTEEMFN-RGYAHVSLFSTLVRGFCKRGRLQETE 824
Query: 356 ELVEL 360
+L+ +
Sbjct: 825 KLLHV 829
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 111/267 (41%), Gaps = 39/267 (14%)
Query: 96 ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPH 155
A LI + K A + + M N + +N+L+ + +E + + +
Sbjct: 494 APLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQV-Q 552
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
K G+ PD +Y+ +I + +L+ A+ LL +M G++ + T+ LL G++ +
Sbjct: 553 KRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHE 612
Query: 216 DAEKIWETMV----------------------NMNVR-------------PNVRSYNARL 240
I ++M+ NM V P++ Y++ +
Sbjct: 613 KVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLI 672
Query: 241 DGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCG 297
GL +KA+ L+ EM + + P + + ALI GF G++ A+ ++ G
Sbjct: 673 SGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLL 732
Query: 298 MNKAIFKLLVPFVCEKGDLDFAFNLCK 324
N + L+ C+ GD+ AF+L K
Sbjct: 733 PNCVTYTALIDGNCKNGDITDAFDLYK 759
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/261 (18%), Positives = 112/261 (42%), Gaps = 8/261 (3%)
Query: 102 YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEP 161
Y K FE + +EM ++ ++ + + E L +++ + G++P
Sbjct: 434 YDKDGAFE----LLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISE-GLKP 488
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
+ Y +I +G + A L M K + DL +N+L+ G + GR +AE+ +
Sbjct: 489 NAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYY 548
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
+ + P+ +Y+ + G + +KA +L+ +M + + P+ T+ L++G+
Sbjct: 549 AQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKS 608
Query: 282 GNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPL 338
+ E+ SG + I+ +++ + +++ AF + + D
Sbjct: 609 NDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIY 668
Query: 339 QLVVDRLAKELRVEEAKELVE 359
++ L K +E+A L++
Sbjct: 669 SSLISGLCKMADMEKAVGLLD 689
>gi|413950866|gb|AFW83515.1| hypothetical protein ZEAMMB73_465290 [Zea mays]
Length = 478
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 131/264 (49%), Gaps = 16/264 (6%)
Query: 105 AAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLV 164
AA E+A ++F +P + V S+N ++ + E +F ++ K I P +V
Sbjct: 179 AAHIEDALRLFRNIP----KPDVCSYNTIIDGLCRRGRLAEALDMFSEMVGKC-IAPTVV 233
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
+Y T+I +G D A + +EM ++G+ +L+T+++L+ G GR A ++ + M
Sbjct: 234 TYTTVIHWLAREGCFDDALKIFHEMGRRGVSPNLVTYSSLIDGLCKGGRATSALELLDRM 293
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
+ PN+ +Y++ +DGL E +A+E++ MR + PD F LI G + G
Sbjct: 294 IKEKKLPNMITYSSVIDGLCKEHMLSEAMEILDRMRLQGRKPDAGLFGKLIVGLCDAGRA 353
Query: 285 EEAKRWYNK---SGCGMNKAIFKL-------LVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
EA + ++ +G N+ + L ++ +C+KG+L AF + + T + D
Sbjct: 354 VEAANYLDEMVLAGIEPNRVTWSLHARINNTVLTALCDKGELGRAFQVYQSTRTRSISTD 413
Query: 335 QAPLQLVVDRLAKELRVEEAKELV 358
L+V+ +K +E+A +V
Sbjct: 414 PTTFHLLVESFSKN-NIEKAARVV 436
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 99/216 (45%), Gaps = 9/216 (4%)
Query: 149 LFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
LF+ P L + SYN ++ A V L A +LL +M G T+N LL
Sbjct: 115 LFRSAPSDLALPHSARSYNAVLAALVAHSHLPLARSLLADMRAAGFAPTAATYNVLLKAH 174
Query: 209 YSN--GRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINP 266
S+ DA +++ + +P+V SYN +DGL + +AL++ EM K I P
Sbjct: 175 CSDAAAHIEDALRLFRNI----PKPDVCSYNTIIDGLCRRGRLAEALDMFSEMVGKCIAP 230
Query: 267 DVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLC 323
V T+ +I EG ++A + ++ + G N + L+ +C+ G A L
Sbjct: 231 TVVTYTTVIHWLAREGCFDDALKIFHEMGRRGVSPNLVTYSSLIDGLCKGGRATSALELL 290
Query: 324 KRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
R E+ L + V+D L KE + EA E+++
Sbjct: 291 DRMIKEKKLPNMITYSSVIDGLCKEHMLSEAMEILD 326
>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 577
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 134/268 (50%), Gaps = 12/268 (4%)
Query: 54 RTNTGIYTGTVQRLANAKRF----RWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFE 109
R N Y+ + L N +R+ R + +++E + ++ F A LI + K
Sbjct: 292 RPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVT---FNA-LIDAFVKEGKLV 347
Query: 110 NARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTI 169
A K++DEM R+ + + ++++L+ + DE +F+ + K P++V+YNT+
Sbjct: 348 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK-DCFPNVVTYNTL 406
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
I F +D L EM ++G+ + +T+ TL+ GF+ +A+ +++ MV+ V
Sbjct: 407 INGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGV 466
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
PN+ +YN LDGL + +KA+ + ++ ++ P ++T+ +I+G G +E+
Sbjct: 467 HPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 526
Query: 290 WY---NKSGCGMNKAIFKLLVPFVCEKG 314
+ + G + I+ ++ C KG
Sbjct: 527 LFCSLSLKGVKPDVIIYNTMISGFCRKG 554
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 115/236 (48%), Gaps = 8/236 (3%)
Query: 101 LYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIE 160
L+ KA+ A + D M R C+ ++++ ++ D L + IE
Sbjct: 202 LHNKAS---EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM-EAAKIE 257
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
++V Y+T+I + D A L EME KG+R ++IT+++L+ + R++DA ++
Sbjct: 258 ANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRL 317
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
M+ + PNV ++NA +D E + +A +L EM + I+PD+FT+ +LI GF
Sbjct: 318 LSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 377
Query: 281 EGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV 333
L+EAK + C N + L+ C+ +D L R S+R LV
Sbjct: 378 HDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVEL-FREMSQRGLV 432
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 125/260 (48%), Gaps = 3/260 (1%)
Query: 36 NLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIE-EILEHQKQYKDISKEGF 94
N +R D + SD+ + N + T A K + +E E L + + I + F
Sbjct: 307 NYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 366
Query: 95 T-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
T + LI + + A+ +F+ M ++C V+++N L+ +K+ DE LF+++
Sbjct: 367 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREM 426
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
+ G+ + V+Y T+I F D+A + +M G+ +++T+NTLL G NG+
Sbjct: 427 SQR-GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGK 485
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
A ++E + + P + +YN ++G+ + + +L + K + PDV +
Sbjct: 486 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNT 545
Query: 274 LIKGFVNEGNLEEAKRWYNK 293
+I GF +G EEA + K
Sbjct: 546 MISGFCRKGLKEEADALFRK 565
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 104/218 (47%), Gaps = 4/218 (1%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
++A +F M ++ FN LL A KKFD V L + + +LGI +L +YN
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKM-QRLGISHNLYTYN 124
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
+I F + + A LL +M K G ++T ++LL G+ R +DA + + MV M
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
RP+ ++ + GL + + +A+ LV M + P++ T+ ++ G G+++ A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244
Query: 288 KRWYNKSGCG---MNKAIFKLLVPFVCEKGDLDFAFNL 322
NK N I+ ++ +C+ D A NL
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNL 282
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 144/330 (43%), Gaps = 41/330 (12%)
Query: 67 LANAKRFRWIEEILEHQKQYKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQ 125
+A K+F + + E + Q IS +T LI + + + A + +M E
Sbjct: 95 IAKMKKFDLVISLGE-KMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEP 153
Query: 126 TVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIK------------AF 173
++++ ++LL + K+ + L + ++G PD +++ T+I A
Sbjct: 154 SIVTLSSLLNGYCHGKRISDAVALVDQMV-EMGYRPDTITFTTLIHGLFLHNKASEAVAL 212
Query: 174 VD-----------------------KGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYS 210
VD +G +D A LL +ME I +++ ++T++
Sbjct: 213 VDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCK 272
Query: 211 NGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
DA ++ M N VRPNV +Y++ + L ++ A L+ +M ++INP+V T
Sbjct: 273 YRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVT 332
Query: 271 FYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTF 327
F ALI FV EG L EA++ Y+ K + + L+ C LD A ++ +
Sbjct: 333 FNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 392
Query: 328 SERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
S+ C + +++ K R++E EL
Sbjct: 393 SKDCFPNVVTYNTLINGFCKAKRIDEGVEL 422
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 102/223 (45%), Gaps = 4/223 (1%)
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLD 197
++S K D+ GLF + + P + +N ++ A D +L +M++ GI +
Sbjct: 61 LHSMKLDDAIGLFGGMVKSRPL-PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHN 119
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
L T+N L+ F + + A + M+ + P++ + ++ L+G K+ A+ LV
Sbjct: 120 LYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVD 179
Query: 258 EMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKG 314
+M PD TF LI G EA ++ GC N + ++V +C++G
Sbjct: 180 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 239
Query: 315 DLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
D+D AFNL + + + + V+D L K ++A L
Sbjct: 240 DIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNL 282
>gi|357140623|ref|XP_003571864.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37230-like [Brachypodium distachyon]
Length = 751
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 135/289 (46%), Gaps = 8/289 (2%)
Query: 53 FRTNTGIYTGTVQRLANAKRFRWIEEIL-EHQKQYKDISKEGFTARLIALYGKAAMFENA 111
FR ++ + LA+ + IL E + E A L+A YGKA + + A
Sbjct: 136 FRPEPATFSLLIPVLASNRMLNHARCILLETMPAFSVSPDEATVAALVAAYGKARIPQEA 195
Query: 112 RKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIK 171
K+F MP +T LS+NA+L A + + ++ + G+ PDL +YNT+I
Sbjct: 196 VKLFRLMPELGITRTALSYNAVLKAILCRGREAMARRIYNAMIAD-GVAPDLSTYNTLIW 254
Query: 172 AFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRP 231
F +++A + +M+ G+ D+ T+N L+ + NG A K+++ M
Sbjct: 255 GFGLSEKMEAAVRVFGDMKGHGVTPDVTTYNNLINAWVRNGDLESARKVFDEMPGAGFER 314
Query: 232 NVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFV-NEGNLEEAKRW 290
N SYN + G K+ ++A+ L EM K + TF AL+ G ++G EA++
Sbjct: 315 NSVSYNVMIKGYVEAKKVEEAVGLFKEMGEKGLRSSEKTFAALMPGLCDDQGRTAEARKA 374
Query: 291 YNKSG----CGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFS-ERCLVD 334
+K +F LV +C+ GDLD A + K++ + LVD
Sbjct: 375 VEDMAERRLTPKDKTVFLRLVTTLCKAGDLDGALEVHKKSGQFKHVLVD 423
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 79/202 (39%), Gaps = 47/202 (23%)
Query: 50 LGRFRTNTGIYTGTVQRLANAKRFRW---IEEILEHQ-KQYKDISKEGFTA------RLI 99
+ R N I G L+ W + E +E + + D+ G T LI
Sbjct: 229 MARRIYNAMIADGVAPDLSTYNTLIWGFGLSEKMEAAVRVFGDMKGHGVTPDVTTYNNLI 288
Query: 100 ALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGI 159
+ + E+ARKVFDEMPG E+ +S+N ++ V +KK +E GLFK
Sbjct: 289 NAWVRNGDLESARKVFDEMPGAGFERNSVSYNVMIKGYVEAKKVEEAVGLFK-------- 340
Query: 160 EPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSN-GRFADAE 218
EM +KG+R TF L+ G + GR A+A
Sbjct: 341 ----------------------------EMGEKGLRSSEKTFAALMPGLCDDQGRTAEAR 372
Query: 219 KIWETMVNMNVRPNVRSYNARL 240
K E M + P ++ RL
Sbjct: 373 KAVEDMAERRLTPKDKTVFLRL 394
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 98/203 (48%), Gaps = 15/203 (7%)
Query: 129 SFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
++N ++ N+ + + F+ L K G++ D +++N++I+ +G L++A +L
Sbjct: 468 AYNPVIEYLCNNGNTKKAETFFRQLMKK-GVD-DKLAFNSLIRGHAKEGVLEAAQEILAI 525
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
M ++G+ D I+ L+ F ADA+ ++M+ P+ + + + L + +
Sbjct: 526 MTRRGVPTDPISHTLLVDSFLKKNEPADAKTALDSMMEQGHLPSPALFKSVMVALFDDGR 585
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKL 305
+ A ++ M K + ++ + +++ G+++EA N ++GC + + KL
Sbjct: 586 VQTASRVMRSMIEKGVTENMDMAHKILEALFMRGHVDEAIGRVNLMVENGCMPD--LDKL 643
Query: 306 LVPFVCEKGDL-------DFAFN 321
LV C+K + DFA +
Sbjct: 644 LVAL-CQKDKVMEAHKLADFALD 665
>gi|219363531|ref|NP_001137052.1| uncharacterized protein LOC100217224 [Zea mays]
gi|194698168|gb|ACF83168.1| unknown [Zea mays]
Length = 338
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 131/253 (51%), Gaps = 7/253 (2%)
Query: 110 NARKVFDEMPGRNCEQTVLSFNALLGA-CVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
+A ++ DEMP +T SFN L+ A C +S + V L K+ + G+ P+ V+YNT
Sbjct: 63 DAAQLLDEMPCWGFSRTAASFNTLIAAYCHDSGGMETVLRL-KERMEREGLVPNEVTYNT 121
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
I+ +G + A ++ EM KG+ + ITFNTL+ + + G A K+ E M+
Sbjct: 122 IVHGLCKEGRMHQARRIVNEMRVKGVTPNTITFNTLIHSYVTLGDNEVAMKMHEEMMKAG 181
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
+ ++ +YNA + GL E +T KA +LV E+ + ++ P+ TF ALI G + N E A
Sbjct: 182 LSADLVTYNALILGLCNEGKTWKASQLVQELCAAKLEPNASTFSALIIGQCKKQNPERAL 241
Query: 289 RWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV-DQAPLQLVVDR 344
N K+G N + +L+ + D + A ++ K RC+ D+A L +
Sbjct: 242 DLLNAMKKAGFQPNYYTYSILISTFSKNKDFEGAIDVLKDMLM-RCIAPDKALLHEFFEG 300
Query: 345 LAKELRVEEAKEL 357
L+K ++ A +L
Sbjct: 301 LSKAKKLHLAADL 313
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 91/193 (47%), Gaps = 5/193 (2%)
Query: 126 TVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTL 185
TV S N + + ++ + F+++ + + P++ + N +++A G + A L
Sbjct: 9 TVESCNVFISGALRLRRPEIAISFFREM-RRCRVSPNVYTVNMVMRAKCALGRVVDAAQL 67
Query: 186 LYEMEKKGIRLDLITFNTLLLGF-YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLA 244
L EM G +FNTL+ + + +G ++ E M + PN +YN + GL
Sbjct: 68 LDEMPCWGFSRTAASFNTLIAAYCHDSGGMETVLRLKERMEREGLVPNEVTYNTIVHGLC 127
Query: 245 IEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKA 301
E + +A +V EMR K + P+ TF LI +V G+ E A + + K+G +
Sbjct: 128 KEGRMHQARRIVNEMRVKGVTPNTITFNTLIHSYVTLGDNEVAMKMHEEMMKAGLSADLV 187
Query: 302 IFKLLVPFVCEKG 314
+ L+ +C +G
Sbjct: 188 TYNALILGLCNEG 200
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 89/207 (42%), Gaps = 7/207 (3%)
Query: 56 NTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFT-ARLIALYGKAAMFENARKV 114
N Y V L R I+ ++ + K ++ T LI Y E A K+
Sbjct: 115 NEVTYNTIVHGLCKEGRMHQARRIV-NEMRVKGVTPNTITFNTLIHSYVTLGDNEVAMKM 173
Query: 115 FDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFV 174
+EM ++++NAL+ N K + L ++L +EP+ +++ +I
Sbjct: 174 HEEMMKAGLSADLVTYNALILGLCNEGKTWKASQLVQELC-AAKLEPNASTFSALIIGQC 232
Query: 175 DKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVR 234
K + + A LL M+K G + + T++ L+ F N F A + + M+ + P+
Sbjct: 233 KKQNPERALDLLNAMKKAGFQPNYYTYSILISTFSKNKDFEGAIDVLKDMLMRCIAPDKA 292
Query: 235 SYNARLDGLAIEKQTKKALELVGEMRS 261
+ +GL+ K+ L L ++RS
Sbjct: 293 LLHEFFEGLSKAKK----LHLAADLRS 315
Score = 41.6 bits (96), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 63/132 (47%), Gaps = 4/132 (3%)
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
P V S N + G ++ + A+ EMR ++P+V+T +++ G + +A +
Sbjct: 8 PTVESCNVFISGALRLRRPEIAISFFREMRRCRVSPNVYTVNMVMRAKCALGRVVDAAQL 67
Query: 291 YNKSGC-GMNK--AIFKLLVPFVC-EKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLA 346
++ C G ++ A F L+ C + G ++ L +R E + ++ +V L
Sbjct: 68 LDEMPCWGFSRTAASFNTLIAAYCHDSGGMETVLRLKERMEREGLVPNEVTYNTIVHGLC 127
Query: 347 KELRVEEAKELV 358
KE R+ +A+ +V
Sbjct: 128 KEGRMHQARRIV 139
>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
Length = 585
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 153/335 (45%), Gaps = 5/335 (1%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++IRG+ E + + F K G F+ N Y + L +L +Q
Sbjct: 142 TLIRGLCVEGKIGDALHLFDKMIGEG-FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQ 200
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
+I K A +F +M G+ + ++ +L+ + N ++
Sbjct: 201 GNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKH 260
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
V L + + I PD+V ++T++ A +G + A+ ++ M +G+ +++T+N L+
Sbjct: 261 VTTLLNQMINS-KIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALM 319
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEIN 265
G +A K+++TMV+ PNV SYN ++G ++ KA L EM KE+
Sbjct: 320 DGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELI 379
Query: 266 PDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
P+ T+ L+ G + G L++A +++ G + A +++L+ ++C+K LD A L
Sbjct: 380 PNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMAL 439
Query: 323 CKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
K D +V+D + + +E A+++
Sbjct: 440 LKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDI 474
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 116/255 (45%), Gaps = 4/255 (1%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
+ A KVFD M V+S+N L+ ++ D+ LF+++ K I P+ V+YN
Sbjct: 328 MDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELI-PNTVTYN 386
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
T++ G L A L +EM G DL T+ LL +A + +T+
Sbjct: 387 TLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGS 446
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
N+ P+++ Y +DG+ + + A ++ + SK + P+V T+ +I G G L+EA
Sbjct: 447 NMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEA 506
Query: 288 KRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDR 344
+ + + +GC + + + + + + A L + + D + L+V+
Sbjct: 507 NKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEM 566
Query: 345 LAKELRVEEAKELVE 359
L + + K+++
Sbjct: 567 LCDDKLDQSVKQILS 581
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 87/170 (51%), Gaps = 3/170 (1%)
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
KLG++PD ++ T+I+ +G + A L +M +G + +++T+ TL+ G G
Sbjct: 130 KLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTN 189
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
A ++ +M N +P+V Y + +D L ++Q +A L +M + I+PD+FT+ +LI
Sbjct: 190 AAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLI 249
Query: 276 KGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
N + N+ S + IF +V +C++G + A ++
Sbjct: 250 HSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDV 299
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 106/271 (39%), Gaps = 39/271 (14%)
Query: 128 LSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLY 187
LS N +N D+ F + H + P V +N ++ + + +L
Sbjct: 33 LSHNRFHSKSLNFNTLDDALSSFNRMLH-MHPPPSTVDFNRLLTSIAKTKQYPTVFSLSN 91
Query: 188 EMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEK 247
+M+ GI D+ T N L+ F R A + ++ + ++P+ ++ + GL +E
Sbjct: 92 QMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEG 151
Query: 248 QTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW---YNKSGCGMNKAIFK 304
+ AL L +M + P+V T+ LI G GN A R + C + ++
Sbjct: 152 KIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYT 211
Query: 305 LLVPFVCEKGDLDFAF--------------------------NLCK---------RTFSE 329
++ +C+ + AF NLC+ + +
Sbjct: 212 SIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINS 271
Query: 330 RCLVDQAPLQLVVDRLAKELRVEEAKELVEL 360
+ + D VVD L KE ++ EA ++V++
Sbjct: 272 KIMPDVVIFSTVVDALCKEGKITEAHDVVDM 302
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 89/208 (42%), Gaps = 11/208 (5%)
Query: 56 NTGIYTGTVQRLANAKRFR----WIEEILEHQKQYKDISKEGFTARLIALY-GKAAMFEN 110
NT Y + L + R + E++ H Q D++ T R++ Y K + +
Sbjct: 381 NTVTYNTLMHGLCHVGRLQDAIALFHEMVAH-GQIPDLA----TYRILLDYLCKKSHLDE 435
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A + + G N + + + ++ + + + +F +L K G+ P++ +Y +I
Sbjct: 436 AMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSK-GLRPNVRTYTIMI 494
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
+G LD AN L EM+ G D T+NT+ G N A ++ + M+
Sbjct: 495 NGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFS 554
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGE 258
+V + ++ L +K + +++ E
Sbjct: 555 ADVSTTTLLVEMLCDDKLDQSVKQILSE 582
>gi|255660942|gb|ACU25640.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 484
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 129/285 (45%), Gaps = 34/285 (11%)
Query: 73 FRWIEE--ILEHQKQYK---------------------DISKEGFT------ARLIALYG 103
FRW+E + EH ++ D+ K+G +I YG
Sbjct: 32 FRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDLWVLMIDSYG 91
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
KA + + + K+F +M E+T+ S++AL + ++ F + + GIEP
Sbjct: 92 KAGIVQESVKMFQKMEELGVERTIKSYDALFKVILRRGRYMMAKRYFNKMLSE-GIEPTR 150
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
++N ++ F G +++AN +M+ + I D++T+NT++ G+ + +AEK +
Sbjct: 151 HTFNVMMWGFFLSGKVETANRFFEDMKSREIMPDVVTYNTMVNGYCRVKKMEEAEKYFVE 210
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M N+ P V +Y + G + AL LV EM+ + P+ T+ L+ G N
Sbjct: 211 MKGRNIEPTVVTYTTLIKGYVSVDRVDDALRLVEEMKGFGMKPNAITYSTLLPGLCNAEK 270
Query: 284 LEEA----KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCK 324
+ EA K K + +IF L+ C+ GDLD A N+ K
Sbjct: 271 MSEARSILKEMVEKYIAPTDNSIFMRLISGQCKAGDLDAAANVLK 315
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 114/243 (46%), Gaps = 22/243 (9%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A++ F++M E T +FN ++ S K + + F+D+ + I PD+V+YNT++
Sbjct: 134 AKRYFNKMLSEGIEPTRHTFNVMMWGFFLSGKVETANRFFEDMKSR-EIMPDVVTYNTMV 192
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
+ ++ A EM+ + I ++T+ TL+ G+ S R DA ++ E M ++
Sbjct: 193 NGYCRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDRVDDALRLVEEMKGFGMK 252
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINP-DVFTFYALIKGFVNEGNLEEAKR 289
PN +Y+ L GL ++ +A ++ EM K I P D F LI G G+L+ A
Sbjct: 253 PNAITYSTLLPGLCNAEKMSEARSILKEMVEKYIAPTDNSIFMRLISGQCKAGDLDAA-- 310
Query: 290 WYNKSGCGMNKAIFKLLVPF-----------VCEKGDLDFAFNLCKRTFSERCLV-DQAP 337
+ KA+ +L VP C+ G+ D A L + + ++ Q+
Sbjct: 311 ------ANVLKAMIRLSVPTEAGHYGVLIENYCKAGEYDKAIKLLDKVIEKDIILRPQST 364
Query: 338 LQL 340
L +
Sbjct: 365 LHM 367
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 116/266 (43%), Gaps = 14/266 (5%)
Query: 102 YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEP 161
Y + E A K F EM GRN E TV+++ L+ V+ + D+ L +++ G++P
Sbjct: 195 YCRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDRVDDALRLVEEM-KGFGMKP 253
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIR-LDLITFNTLLLGFYSNGRFADAEKI 220
+ ++Y+T++ + + A ++L EM +K I D F L+ G G A +
Sbjct: 254 NAITYSTLLPGLCNAEKMSEARSILKEMVEKYIAPTDNSIFMRLISGQCKAGDLDAAANV 313
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI--------NPDVFTFY 272
+ M+ ++V Y ++ + KA++L+ ++ K+I + + +
Sbjct: 314 LKAMIRLSVPTEAGHYGVLIENYCKAGEYDKAIKLLDKVIEKDIILRPQSTLHMESSAYN 373
Query: 273 ALIKGFVNEGNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSE 329
LI+ N G +A+ R K G + L+ ++G D AF L K
Sbjct: 374 PLIEYLCNNGQTAKAEALVRQLMKLGV-QDPTALNTLIRGHSQEGSPDSAFELLKIMLRR 432
Query: 330 RCLVDQAPLQLVVDRLAKELRVEEAK 355
+ +Q+ +V K+ +AK
Sbjct: 433 KVDSEQSSYDSLVQSYLKKNEPADAK 458
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 77/162 (47%), Gaps = 10/162 (6%)
Query: 90 SKEGFTARLIALYGKAAMFENARKVFDEM--------PGRNCEQTVLSFNALLGACVNSK 141
++ G LI Y KA ++ A K+ D++ P ++N L+ N+
Sbjct: 324 TEAGHYGVLIENYCKAGEYDKAIKLLDKVIEKDIILRPQSTLHMESSAYNPLIEYLCNNG 383
Query: 142 KFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITF 201
+ + + L + L KLG++ D + NT+I+ +GS DSA LL M ++ + + ++
Sbjct: 384 QTAKAEALVRQL-MKLGVQ-DPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEQSSY 441
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
++L+ + ADA+ ++M+ P+ + + ++ L
Sbjct: 442 DSLVQSYLKKNEPADAKAALDSMIENGHLPDSSLFRSVMESL 483
>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 666
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 128/269 (47%), Gaps = 18/269 (6%)
Query: 99 IALYGKAAM--FENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPH 155
+AL+G F A +FD+M V++FN L+ G C+ + E L +
Sbjct: 196 LALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVL-EAAALVNKMVG 254
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
K G+ D+V+Y TI+ G SA LL +ME+ I+ D++ ++ ++ +G +
Sbjct: 255 K-GLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHS 313
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
DA+ ++ M+ + PNV +YN +DG + A L+ +M +EINPDV TF ALI
Sbjct: 314 DAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALI 373
Query: 276 KGFVNEGNLEEAKRWYNKSGCGMNKAIFKLLVPF------VCEKGDLDFAFNLCKRTFSE 329
V EG L EA++ ++ +++ IF V + C+ D A K F
Sbjct: 374 SASVKEGKLFEAEKLCDEM---LHRCIFPDTVTYNSMIYGFCKHNRFDDA----KHMFDL 426
Query: 330 RCLVDQAPLQLVVDRLAKELRVEEAKELV 358
D ++D + RV+E +L+
Sbjct: 427 MASPDVVTFNTIIDVYCRAKRVDEGMQLL 455
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 122/251 (48%), Gaps = 10/251 (3%)
Query: 101 LYG--KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLG 158
+YG K F++A+ +FD M + V++FN ++ +K+ DE L +++ + G
Sbjct: 408 IYGFCKHNRFDDAKHMFDLMASPD----VVTFNTIIDVYCRAKRVDEGMQLLREISRR-G 462
Query: 159 IEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAE 218
+ + +YNT+I F + +L++A L EM G+ D IT N LL GF N + +A
Sbjct: 463 LVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEAL 522
Query: 219 KIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGF 278
+++E + + + +YN + G+ + +A +L + + PDV T+ +I GF
Sbjct: 523 ELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGF 582
Query: 279 VNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQ 335
+ + +A ++K +G + + + L+ + G++D + L S D
Sbjct: 583 CGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDA 642
Query: 336 APLQLVVDRLA 346
+++V D +
Sbjct: 643 FTIKMVADLIT 653
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 96/194 (49%), Gaps = 6/194 (3%)
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
F A + A + +FE A K+ DEM R +++N+++ +FD+ +F
Sbjct: 369 FNALISASVKEGKLFE-AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF--- 424
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
L PD+V++NTII + +D LL E+ ++G+ + T+NTL+ GF
Sbjct: 425 --DLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDN 482
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
A+ +++ M++ V P+ + N L G ++ ++ALEL ++ +I+ D +
Sbjct: 483 LNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNI 542
Query: 274 LIKGFVNEGNLEEA 287
+I G ++EA
Sbjct: 543 IIHGMCKGSKVDEA 556
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 99/229 (43%), Gaps = 22/229 (9%)
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
V N +I FV D A +L +ME + I L++ +FN L+ F + + + +
Sbjct: 107 VDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGK 166
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG---------------EMRSKEINPDV 268
+ + +P+V ++N L GL +E + +AL L G +M + P V
Sbjct: 167 LTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVV 226
Query: 269 FTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKR 325
TF LI G EG + EA NK G ++ + +V +C+ GD A NL +
Sbjct: 227 ITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSK 286
Query: 326 TFSERCLVDQAPLQLVVDRLAKELRVEEAK----ELVELGKTNSYCRYN 370
D ++DRL K+ +A+ E++E G + YN
Sbjct: 287 MEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYN 335
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 115/254 (45%), Gaps = 28/254 (11%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
++A FD M T + N ++G V + D L++ + + I ++ S+N
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIR-RIPLNIYSFN 145
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR-------------- 213
+IK F D L + + ++ K G + D++TFNTLL G R
Sbjct: 146 ILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVET 205
Query: 214 -FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFY 272
F +A +++ MV + + P V ++N ++GL +E + +A LV +M K ++ DV T+
Sbjct: 206 GFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYG 265
Query: 273 ALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKG---DLDFAFN----- 321
++ G G+ + A +K + + I+ ++ +C+ G D + F+
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK 325
Query: 322 -LCKRTFSERCLVD 334
+ F+ C++D
Sbjct: 326 GIAPNVFTYNCMID 339
>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 806
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 128/269 (47%), Gaps = 18/269 (6%)
Query: 99 IALYGKAAM--FENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPH 155
+AL+G F A +FD+M V++FN L+ G C+ + E L +
Sbjct: 196 LALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVL-EAAALVNKMVG 254
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
K G+ D+V+Y TI+ G SA LL +ME+ I+ D++ ++ ++ +G +
Sbjct: 255 K-GLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHS 313
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
DA+ ++ M+ + PNV +YN +DG + A L+ +M +EINPDV TF ALI
Sbjct: 314 DAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALI 373
Query: 276 KGFVNEGNLEEAKRWYNKSGCGMNKAIFKLLVPF------VCEKGDLDFAFNLCKRTFSE 329
V EG L EA++ ++ +++ IF V + C+ D A K F
Sbjct: 374 SASVKEGKLFEAEKLCDEM---LHRCIFPDTVTYNSMIYGFCKHNRFDDA----KHMFDL 426
Query: 330 RCLVDQAPLQLVVDRLAKELRVEEAKELV 358
D ++D + RV+E +L+
Sbjct: 427 MASPDVVTFNTIIDVYCRAKRVDEGMQLL 455
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 137/285 (48%), Gaps = 11/285 (3%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I + K F++A+ +FD M + V++FN ++ +K+ DE L +++ +
Sbjct: 407 MIYGFCKHNRFDDAKHMFDLMASPD----VVTFNTIIDVYCRAKRVDEGMQLLREISRR- 461
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ + +YNT+I F + +L++A L EM G+ D IT N LL GF N + +A
Sbjct: 462 GLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEA 521
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+++E + + + +YN + G+ + +A +L + + PDV T+ +I G
Sbjct: 522 LELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISG 581
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
F + + +A ++K +G + + + L+ + G++D + L S D
Sbjct: 582 FCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGD 641
Query: 335 QAPLQL---VVDRLAKELRVEEAKELVELGKTNSYCRYNLKFPSE 376
+++ ++ R++ E +E G+T+S RY ++ E
Sbjct: 642 AFTIKMAEEIICRVSDEEIIENYLRPKINGETSSIPRYVVELAEE 686
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 96/194 (49%), Gaps = 6/194 (3%)
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
F A + A + +FE A K+ DEM R +++N+++ +FD+ +F
Sbjct: 369 FNALISASVKEGKLFE-AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF--- 424
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
L PD+V++NTII + +D LL E+ ++G+ + T+NTL+ GF
Sbjct: 425 --DLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDN 482
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
A+ +++ M++ V P+ + N L G ++ ++ALEL ++ +I+ D +
Sbjct: 483 LNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNI 542
Query: 274 LIKGFVNEGNLEEA 287
+I G ++EA
Sbjct: 543 IIHGMCKGSKVDEA 556
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 99/229 (43%), Gaps = 22/229 (9%)
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
V N +I FV D A +L +ME + I L++ +FN L+ F + + + +
Sbjct: 107 VDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGK 166
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG---------------EMRSKEINPDV 268
+ + +P+V ++N L GL +E + +AL L G +M + P V
Sbjct: 167 LTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVV 226
Query: 269 FTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKR 325
TF LI G EG + EA NK G ++ + +V +C+ GD A NL +
Sbjct: 227 ITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSK 286
Query: 326 TFSERCLVDQAPLQLVVDRLAKELRVEEAK----ELVELGKTNSYCRYN 370
D ++DRL K+ +A+ E++E G + YN
Sbjct: 287 MEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYN 335
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 115/254 (45%), Gaps = 28/254 (11%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
++A FD M T + N ++G V + D L++ + + I ++ S+N
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIR-RIPLNIYSFN 145
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR-------------- 213
+IK F D L + + ++ K G + D++TFNTLL G R
Sbjct: 146 ILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVET 205
Query: 214 -FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFY 272
F +A +++ MV + + P V ++N ++GL +E + +A LV +M K ++ DV T+
Sbjct: 206 GFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYG 265
Query: 273 ALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKG---DLDFAFN----- 321
++ G G+ + A +K + + I+ ++ +C+ G D + F+
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK 325
Query: 322 -LCKRTFSERCLVD 334
+ F+ C++D
Sbjct: 326 GIAPNVFTYNCMID 339
>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
Length = 746
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 143/314 (45%), Gaps = 6/314 (1%)
Query: 64 VQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNC 123
++ L A + R +LE E L+ + + + A +V M C
Sbjct: 192 MKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGC 251
Query: 124 EQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSA 182
T ++ N L+ G C + D + + +++ + G EPD ++YNT + G + A
Sbjct: 252 SPTKVTVNVLINGYCKLGRVEDALGYIQQEIAN--GFEPDQITYNTFVNGLCQNGHVGHA 309
Query: 183 NTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDG 242
++ M ++G D+ T+N ++ NG+ +A+ I MV P++ ++N +
Sbjct: 310 LKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVA 369
Query: 243 LAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMN 299
L + ++AL+L ++ K ++PDV+TF LI G+ + A R + + SGC +
Sbjct: 370 LCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPD 429
Query: 300 KAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ + L+ +C G L A +L K S C ++D L K++R+EEA+E+ +
Sbjct: 430 EVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFD 489
Query: 360 LGKTNSYCRYNLKF 373
R + F
Sbjct: 490 QMDLQGISRNAITF 503
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 118/260 (45%), Gaps = 4/260 (1%)
Query: 110 NARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTI 169
+A KV D M + V ++N ++ + + +E G+ + + G PD+ ++NT+
Sbjct: 308 HALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVER-GCLPDITTFNTL 366
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
I A L+ A L ++ KG+ D+ TFN L+ G A +++E M +
Sbjct: 367 IVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGC 426
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
P+ +YN +D L + KAL+L+ EM S T+ +I G + +EEA+
Sbjct: 427 TPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEE 486
Query: 290 WYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLA 346
+++ G N F L+ +C+ +D A L + SE + ++
Sbjct: 487 VFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYC 546
Query: 347 KELRVEEAKELVELGKTNSY 366
K+ +++A ++++ N +
Sbjct: 547 KQGDIKKAADILQTMTANGF 566
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 86/179 (48%), Gaps = 1/179 (0%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K E A +VFD+M + + ++FN L+ K+ D+ + L + + G++P+
Sbjct: 477 KKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISE-GLQPNN 535
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
++YN+I+ + +G + A +L M G +D++T+ TL+ G GR A K+
Sbjct: 536 ITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRG 595
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEG 282
M +R ++YN + L T+ A+ L EM PD FT+ + +G G
Sbjct: 596 MRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGG 654
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 114/258 (44%), Gaps = 37/258 (14%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE---------VDGLFKDL- 153
K E A+ + ++M R C + +FN L+ A + + +E + GL D+
Sbjct: 337 KNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVY 396
Query: 154 --------------PH----------KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEM 189
P G PD V+YNT+I G L A LL EM
Sbjct: 397 TFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEM 456
Query: 190 EKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQT 249
E G +T+NT++ G R +AE++++ M + N ++N +DGL +K+
Sbjct: 457 ESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRI 516
Query: 250 KKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK---RWYNKSGCGMNKAIFKLL 306
A +L+ +M S+ + P+ T+ +++ + +G++++A + +G ++ + L
Sbjct: 517 DDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTL 576
Query: 307 VPFVCEKGDLDFAFNLCK 324
+ +C+ G A L +
Sbjct: 577 INGLCKAGRTQVALKLLR 594
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 102/234 (43%), Gaps = 7/234 (2%)
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT 203
D VD + L GI+ D V YN ++ V+ + T+ EM ++GI+ D++TFNT
Sbjct: 131 DAVDLVLNQLDPLFGIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNT 190
Query: 204 LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
L+ + A + E M + V P+ ++ + G E K AL + M
Sbjct: 191 LMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMG 250
Query: 264 INPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAF 320
+P T LI G+ G +E+A + + +G ++ + V +C+ G + A
Sbjct: 251 CSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHAL 310
Query: 321 NLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAK----ELVELGKTNSYCRYN 370
+ E D +VV+ L K ++EEAK ++VE G +N
Sbjct: 311 KVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFN 364
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 79/192 (41%), Gaps = 39/192 (20%)
Query: 179 LDSANTLLYEMEKK-GIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYN 237
+D+ + +L +++ GI+ D + +N LL + E ++ M ++P+V ++N
Sbjct: 130 VDAVDLVLNQLDPLFGIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFN 189
Query: 238 ARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS--- 294
+ L Q + A+ ++ EM S + PD TF L++GFV EG+++ A R +
Sbjct: 190 TLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEM 249
Query: 295 GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA 354
GC K +L+ C+ G RVE+A
Sbjct: 250 GCSPTKVTVNVLINGYCKLG-----------------------------------RVEDA 274
Query: 355 KELVELGKTNSY 366
++ N +
Sbjct: 275 LGYIQQEIANGF 286
>gi|357134934|ref|XP_003569069.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Brachypodium distachyon]
Length = 642
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 134/308 (43%), Gaps = 10/308 (3%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
++ + +EN + +V + G N Y ++ L R +L+ +
Sbjct: 133 LLDALLRENLVAAVVPVYDNMRKAG-VEPNVYTYNLLIKALCQNDRVGAARRMLDEMARK 191
Query: 87 KDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEV 146
E +I+ K + AR + EM S+NA++ A + EV
Sbjct: 192 GCRPDEVSHTTIISALCKLDRLDEARGILAEM-----TPVGASYNAVVHALCGQFRMREV 246
Query: 147 DGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLL 206
+ ++ H+ G+ PD V+Y +I+ AF L A +L M +G ++ TF L+
Sbjct: 247 FLVVDEMVHR-GLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPNVQTFTVLVK 305
Query: 207 GFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINP 266
GF+ +G+ DA +W MV P+ SYN + GL K+AL + M + P
Sbjct: 306 GFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLP 365
Query: 267 DVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLC 323
DV T+ LI GF G+L+ A +N +GC N ++ +V +C+K D A NL
Sbjct: 366 DVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLI 425
Query: 324 KRTFSERC 331
+ E C
Sbjct: 426 DKMSLENC 433
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 109/230 (47%), Gaps = 12/230 (5%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + KA + A ++++M C+ V+ + ++ FD+ + L K+
Sbjct: 373 LIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLID----KM 428
Query: 158 GIE---PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRF 214
+E P+ +++NT+I++ D G A + + M + G + T+N LL G + G
Sbjct: 429 SLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNC 488
Query: 215 ADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYAL 274
DA ++ M+N ++ SYN + GL + K+A+ L+G M + I PD FTF A+
Sbjct: 489 EDALRMLTEMLNHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNAI 548
Query: 275 IKGFVNEGNLEEAKRW----YNKSGCGMNKAIFKLLVPFVCEKGDLDFAF 320
I + EGN+ A W + C N + L+ +C + LD A
Sbjct: 549 IHAYCKEGNVRAAA-WMLGRMDAVNCPRNIVAYTSLMSGLCSQHKLDDAM 597
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 142/347 (40%), Gaps = 37/347 (10%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVF-DEM 118
+ TV+RLA A ++ L+ + EG I + +A + A K F
Sbjct: 58 HEATVRRLAAAGDLDGVQYTLQEMRLRGVACPEGALVAAICAFARAGAADRALKTFYRAR 117
Query: 119 PGRNCEQ-TVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKG 177
C TV +N LL A + V ++ ++ K G+EP++ +YN +IKA
Sbjct: 118 HDLGCAAPTVRVYNHLLDALLRENLVAAVVPVYDNM-RKAGVEPNVYTYNLLIKALCQND 176
Query: 178 SLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW---------------- 221
+ +A +L EM +KG R D ++ T++ R +A I
Sbjct: 177 RVGAARRMLDEMARKGCRPDEVSHTTIISALCKLDRLDEARGILAEMTPVGASYNAVVHA 236
Query: 222 --------------ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPD 267
+ MV+ +RP+ +Y + + ++ + A ++ M ++ P+
Sbjct: 237 LCGQFRMREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPN 296
Query: 268 VFTFYALIKGFVNEGNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCK 324
V TF L+KGF ++G + +A W G + + +L+ +C GDL A +
Sbjct: 297 VQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFS 356
Query: 325 RTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKTNSYCRYNL 371
CL D ++D +K ++ A + TN+ C+ N+
Sbjct: 357 CMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWN-DMTNAGCKPNV 402
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 110/269 (40%), Gaps = 10/269 (3%)
Query: 60 YTGTVQRLANAKRFRWIEEILE---HQKQYKDISKEGFTARLIALYGKAAMFENARKVFD 116
Y V L R R + +++ H+ D +T+ ++ + KA A +
Sbjct: 230 YNAVVHALCGQFRMREVFLVVDEMVHRGLRPDTV--AYTS-IVGAFCKARELRMACAILA 286
Query: 117 EMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDK 176
M C V +F L+ + K + G++ + + G P +SYN +I+
Sbjct: 287 RMVTEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVAE-GWAPSTISYNVLIRGLCHI 345
Query: 177 GSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSY 236
G L A + M K D+ T++TL+ GF G A IW M N +PNV Y
Sbjct: 346 GDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVY 405
Query: 237 NARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---K 293
+D L + +A L+ +M + P+ TF LI+ + G A ++ +
Sbjct: 406 TNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRR 465
Query: 294 SGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
GC N + L+ + +G+ + A +
Sbjct: 466 YGCPPNDRTYNELLHGLFREGNCEDALRM 494
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 121/304 (39%), Gaps = 58/304 (19%)
Query: 27 VIRGIYKENNLKRLVDKFK---KSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQ 83
+IRG+ +LKR + F KS L RT + + G F ++
Sbjct: 338 LIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDG----------FSKAGDLDVAM 387
Query: 84 KQYKDISKEGFTARLIA------LYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL--- 134
+ D++ G ++ + K MF+ A + D+M NC L+FN L+
Sbjct: 388 SIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRSL 447
Query: 135 -------------------GACVNSKKFDEV-DGLFKD-------------LPHKLGIEP 161
G N + ++E+ GLF++ L H G E
Sbjct: 448 CDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEMLNH--GFEL 505
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
LVSYNT I + A LL M +GI+ D TFN ++ + G A +
Sbjct: 506 SLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHAYCKEGNVRAAAWML 565
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG-FVN 280
M +N N+ +Y + + GL + + A+ + +M + I P+ T+ L++G F +
Sbjct: 566 GRMDAVNCPRNIVAYTSLMSGLCSQHKLDDAMVYLLKMLYEGICPNEATWNVLVRGIFTH 625
Query: 281 EGNL 284
G +
Sbjct: 626 LGTI 629
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 70/151 (46%), Gaps = 1/151 (0%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
E+A ++ EM E +++S+N + + E L + + GI+PD ++N
Sbjct: 489 EDALRMLTEMLNHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQ-GIQPDAFTFNA 547
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
II A+ +G++ +A +L M+ +++ + +L+ G S + DA M+
Sbjct: 548 IIHAYCKEGNVRAAAWMLGRMDAVNCPRNIVAYTSLMSGLCSQHKLDDAMVYLLKMLYEG 607
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
+ PN ++N + G+ T + L+ +
Sbjct: 608 ICPNEATWNVLVRGIFTHLGTIGPMHLIDHI 638
>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 127/265 (47%), Gaps = 4/265 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I Y E AR +FD M R + ++ + + K +E G+ + + ++
Sbjct: 232 IIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKM-KEI 290
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ P V+YNT+I + +KG+L+ A +M ++G+ + T+N L+ + + + +A
Sbjct: 291 GLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEA 350
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ I + M + P+ +YN ++G KKA L EM SK I P T+ +LI
Sbjct: 351 DGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYV 410
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
G +++A + K G + +F L+ C G++D AF + K + + D
Sbjct: 411 LSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPD 470
Query: 335 QAPLQLVVDRLAKELRVEEAKELVE 359
+ ++ +E +VE A+EL+E
Sbjct: 471 EVTFNTLMQGRCREGKVEAARELIE 495
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 108/189 (57%), Gaps = 6/189 (3%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHK 156
LI + K + A +F+++ + ++ FNAL+ G C N D + K++ +
Sbjct: 407 LIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGN-MDRAFAMLKEM-DQ 464
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
+ + PD V++NT+++ +G +++A L+ EM+ +GI+ D I++NTL+ G+ G D
Sbjct: 465 MKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKD 524
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
A ++ + M+++ P + +YNA + GL ++ A +L+ EM SK I P+ T+ +LI+
Sbjct: 525 AFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIE 584
Query: 277 GFVNEGNLE 285
G GN+E
Sbjct: 585 GI---GNVE 590
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 144/320 (45%), Gaps = 29/320 (9%)
Query: 25 GSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQK 84
GS I G+ KE L+ +K ++G R Y + N LE
Sbjct: 265 GSFISGMCKEGKLEEASGMLEKMKEIG-LRPTAVTYNTLIDGYCNKGN-------LEMAF 316
Query: 85 QYKD-ISKEG-------FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGA 136
Y+D + +EG + + AL+ M E A + EM + +++N L+
Sbjct: 317 DYRDKMVREGLMPTVSTYNMLIHALFLDCKMDE-ADGIIKEMSEKGLVPDSVTYNILING 375
Query: 137 ---CVNSKK-FDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKK 192
C N KK F D + GI+P V+Y ++I +G + A+ L ++ +K
Sbjct: 376 YCRCGNVKKAFTLHDEMISK-----GIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRK 430
Query: 193 GIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKA 252
GI DLI FN L+ G +NG A + + M M V P+ ++N + G E + + A
Sbjct: 431 GIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAA 490
Query: 253 LELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS-GCGMNKAI--FKLLVPF 309
EL+ EM+S+ I PD ++ LI G+ G++++A R ++ G N + + L+
Sbjct: 491 RELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQG 550
Query: 310 VCEKGDLDFAFNLCKRTFSE 329
+C+ + D A L K S+
Sbjct: 551 LCKNEEGDHAEQLLKEMISK 570
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 101/185 (54%), Gaps = 1/185 (0%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
++A + FD M G+ V + N +L + S + ++ L+ ++ ++ I+ +V++N
Sbjct: 138 DDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEM-FRMRIKSSVVTFNI 196
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
+I +G L A + ME GI+ +++T+NT++ G+ S GR A I++ M
Sbjct: 197 MINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRG 256
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
V+P+ +Y + + G+ E + ++A ++ +M+ + P T+ LI G+ N+GNLE A
Sbjct: 257 VKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAF 316
Query: 289 RWYNK 293
+ +K
Sbjct: 317 DYRDK 321
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 107/257 (41%), Gaps = 43/257 (16%)
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
LGI+ V Y+ +I+A + D A M+ KG+ + N +L F + R
Sbjct: 116 LGIKT-YVLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEK 174
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
A ++ M M ++ +V ++N ++ L E + KKA E +G M + I P+V T+ +I
Sbjct: 175 AWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIH 234
Query: 277 GFVNEGNLEEAKRWYNKSGC---------------GMNK--------------------- 300
G+ + G +E A+ ++ C GM K
Sbjct: 235 GYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRP 294
Query: 301 --AIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA---- 354
+ L+ C KG+L+ AF+ + E + + +++ L + +++EA
Sbjct: 295 TAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGII 354
Query: 355 KELVELGKTNSYCRYNL 371
KE+ E G YN+
Sbjct: 355 KEMSEKGLVPDSVTYNI 371
>gi|255660838|gb|ACU25588.1| pentatricopeptide repeat-containing protein [Neosparton
ephedroides]
Length = 418
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 131/283 (46%), Gaps = 10/283 (3%)
Query: 86 YKDISKEGFTARL------IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
YK+I + G+ A L + + K A+ VFDE+ +V+SFN L+ +
Sbjct: 124 YKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIR 183
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
DE L K H GI+PD+ +Y+ +I + ++ AN L EM G+ + +
Sbjct: 184 LGDLDEGFRL-KSAMHGSGIQPDVYTYSVLINGLCKESKMNDANELFDEMIGNGLVPNGV 242
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
TF TL+ G G A + ++ M+ P++ +YN + GL E K+A +L+ EM
Sbjct: 243 TFTTLIDGHCKTGSIDLAMEAYKEMLRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEM 302
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLEEA---KRWYNKSGCGMNKAIFKLLVPFVCEKGDL 316
K + PD T+ LI G EG+LE A K+ K ++ + L+ +C +G
Sbjct: 303 SMKGLKPDKITYTTLIDGSCKEGDLETAFKYKKRMIKENIRLDDVAYTALISGLCREGQS 362
Query: 317 DFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
A + + S D ++++ K+ V+ +L++
Sbjct: 363 VGAEKMLREMLSVGLKPDNGTYTMIINEFCKKGDVKMGSKLLK 405
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 81/173 (46%), Gaps = 1/173 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K + A + + EM + ++++N L+ + L ++ K
Sbjct: 247 LIDGHCKTGSIDLAMEAYKEMLRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEMSMK- 305
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD ++Y T+I +G L++A M K+ IRLD + + L+ G G+ A
Sbjct: 306 GLKPDKITYTTLIDGSCKEGDLETAFKYKKRMIKENIRLDDVAYTALISGLCREGQSVGA 365
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
EK+ M+++ ++P+ +Y ++ + K +L+ EM+ P V T
Sbjct: 366 EKMLREMLSVGLKPDNGTYTMIINEFCKKGDVKMGSKLLKEMQRDGHVPCVVT 418
>gi|255660794|gb|ACU25566.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
Length = 418
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 144/313 (46%), Gaps = 4/313 (1%)
Query: 5 SRLLSCSFSTTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTV 64
S + + T T ++ S + Y E+ R + + + +FR +
Sbjct: 49 SAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVL 108
Query: 65 QRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCE 124
+ L K F+ + E + + F L+ + K A+ VFD + +
Sbjct: 109 EHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLR 168
Query: 125 QTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANT 184
+V+SFN L+ + DE L K+ G++PD+ +Y+ +I + +D AN
Sbjct: 169 PSVVSFNTLMNGYIKLGDLDEGFRL-KNAMQVSGVQPDVYTYSVLINGLCKESKMDDANV 227
Query: 185 LLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLA 244
L EM KG+ + +TF TL+ G NGR A +I++ M++ ++ P++ +YN + GL
Sbjct: 228 LFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLC 287
Query: 245 IEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA---KRWYNKSGCGMNKA 301
+ K+A +L+ EM K + PD T+ LI G EG+LE A ++ K ++
Sbjct: 288 KKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDV 347
Query: 302 IFKLLVPFVCEKG 314
+ L+ +C++G
Sbjct: 348 AYTALISGLCQEG 360
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 104/206 (50%), Gaps = 2/206 (0%)
Query: 80 LEHQKQYKDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACV 138
L++ Q + + +T + LI K + ++A +FDEM + ++F L+
Sbjct: 193 LKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHC 252
Query: 139 NSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL 198
+ + D ++K + + + PDL++YNT+I KG L A L+ EM KG+ D
Sbjct: 253 KNGRVDLAMEIYKQMLSQ-SLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDK 311
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
IT+ TL+ G G A + + M+ N+R + +Y A + GL E ++ A +++ E
Sbjct: 312 ITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371
Query: 259 MRSKEINPDVFTFYALIKGFVNEGNL 284
M + + P++ T+ +I F +G++
Sbjct: 372 MLNVGLKPEIGTYTMIINEFCKKGDV 397
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 100/218 (45%), Gaps = 4/218 (1%)
Query: 102 YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEP 161
Y K + ++ + M + V +++ L+ K D+ + LF ++ K G+ P
Sbjct: 181 YIKLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDK-GLVP 239
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
+ V++ T+I G +D A + +M + + DLIT+NTL+ G G A+ +
Sbjct: 240 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLI 299
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
+ M+ + P+ +Y +DG E + A E M + I D + ALI G E
Sbjct: 300 DEMIMKGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQE 359
Query: 282 GNLEEAKRWYNKS-GCGMNKAI--FKLLVPFVCEKGDL 316
G +A++ + G+ I + +++ C+KGD+
Sbjct: 360 GRSVDAEKMLREMLNVGLKPEIGTYTMIINEFCKKGDV 397
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 82/173 (47%), Gaps = 1/173 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K + A +++ +M ++ ++++N L+ + L ++ K
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMK- 305
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ PD ++Y T+I +G L++A M K+ IRLD + + L+ G GR DA
Sbjct: 306 GLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDA 365
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
EK+ M+N+ ++P + +Y ++ + +L+ EM+ P V T
Sbjct: 366 EKMLREMLNVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
Length = 816
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 94/373 (25%), Positives = 163/373 (43%), Gaps = 23/373 (6%)
Query: 16 ATATGPKFIG--SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRF 73
T P + +VI G +KE ++ + D FK+ G + Y+ V L A+
Sbjct: 214 GTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRG-IPPDLVTYSSVVHALCKARAM 272
Query: 74 RWIEEILEHQKQYKDISKEGFTA-RLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNA 132
E L Q K + + +T LI Y ++ A +VF EM ++ V++ N
Sbjct: 273 DKAEAFLR-QMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNT 331
Query: 133 LLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKK 192
L+G+ K E +F + K G PD+ SY ++ + KG L L M
Sbjct: 332 LMGSLCKYGKIKEARDVFDTMAMK-GQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGD 390
Query: 193 GIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKA 252
GI D+ TFN L+ + + G A I+ M + V+P+V +Y + L + A
Sbjct: 391 GIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDA 450
Query: 253 LELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPF 309
+E +M + + PD + ++ LI+GF G+L +AK ++ +G ++ F ++
Sbjct: 451 MEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINN 510
Query: 310 VCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVD------RLAKELRVEEA-------KE 356
+C+ G + A N+ T + D +++D ++ K LRV +A
Sbjct: 511 LCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPN 570
Query: 357 LVELGK-TNSYCR 368
+V G N YC+
Sbjct: 571 VVGYGTLVNGYCK 583
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 129/298 (43%), Gaps = 39/298 (13%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI Y M + A +F+EM + V+++ ++ A K D+ F + +
Sbjct: 402 LIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQ- 460
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ PD +Y+ +I+ F GSL A L+ E+ G+RLD++ F +++ GR DA
Sbjct: 461 GVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDA 520
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ I++ VN+ + P+ YN +DG + + +KAL + M S I P+V + L+ G
Sbjct: 521 QNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNG 580
Query: 278 FVNEGNLEEAKRWY--------------------------------------NKSGCGMN 299
+ G ++E + +SG MN
Sbjct: 581 YCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMN 640
Query: 300 KAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
K + +++ + + D A L K + +D L ++ + + RVEEAK+L
Sbjct: 641 KCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDL 698
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 129/275 (46%), Gaps = 9/275 (3%)
Query: 53 FRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ----YKDISKEGFTARLIALYGKAAMF 108
R + I + ++ AKR +IL H+ D+ + + GK+
Sbjct: 144 LRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQA 203
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
++ ++ E G C V+++N ++ ++ LFK++ + GI PDLV+Y++
Sbjct: 204 DDLLRMMAE-GGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQR-GIPPDLVTYSS 261
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
++ A ++D A L +M KG+ D T+N L+ G+ S G++ +A ++++ M +
Sbjct: 262 VVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQS 321
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
+ P+V + N + L + K+A ++ M K NPDVF++ ++ G+ +G L +
Sbjct: 322 ILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMT 381
Query: 289 RWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAF 320
++ G + F +L+ G LD A
Sbjct: 382 DLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAM 416
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 96/198 (48%), Gaps = 4/198 (2%)
Query: 102 YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEP 161
Y E A +VFD M E V+ + L+ + DE LF+++ K GI+P
Sbjct: 546 YCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQK-GIKP 604
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
+ YN II + G A +EM + GI ++ T++ +L G + N F +A ++
Sbjct: 605 STILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLF 664
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
+ + MNV+ ++ + N + G+ ++ ++A +L + + P T+ +I + E
Sbjct: 665 KELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKE 724
Query: 282 GNLEEAKRWYNK---SGC 296
G +EEA+ ++ +GC
Sbjct: 725 GLVEEAEDMFSSMQNAGC 742
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 108/258 (41%), Gaps = 9/258 (3%)
Query: 40 LVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLI 99
LV K +K+ + + GI V + I I E ++++ ++G I
Sbjct: 548 LVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTI 607
Query: 100 ALYGKA--AMFENARKV-----FDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKD 152
LY +FE R V F EM +++ +L ++ FDE LFK+
Sbjct: 608 -LYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKE 666
Query: 153 LPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNG 212
L + ++ D+++ NT+I ++ A L + + G+ +T++ ++ G
Sbjct: 667 L-RAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEG 725
Query: 213 RFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFY 272
+AE ++ +M N P+ R N + L + + +A + ++ + + + T
Sbjct: 726 LVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAM 785
Query: 273 ALIKGFVNEGNLEEAKRW 290
L+ F ++G E R+
Sbjct: 786 LLVDLFSSKGTCREQIRF 803
>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g64320, mitochondrial; Flags: Precursor
gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 730
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 115/234 (49%), Gaps = 8/234 (3%)
Query: 93 GFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKD 152
GF LI+ + K A ++F EMP + C+ V +FN+L+ + L +D
Sbjct: 461 GFNC-LISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRD 519
Query: 153 LPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNG 212
+ + G+ + V+YNT+I AF+ +G + A L+ EM +G LD IT+N+L+ G G
Sbjct: 520 MISE-GVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAG 578
Query: 213 RFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFY 272
A ++E M+ P+ S N ++GL ++A+E EM + PD+ TF
Sbjct: 579 EVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFN 638
Query: 273 ALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLC 323
+LI G G +E+ + K G + F L+ ++C+ G F ++ C
Sbjct: 639 SLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGG---FVYDAC 689
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 135/309 (43%), Gaps = 46/309 (14%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K + A+ +F +P + ++ FN L+ V + D+ + D+ GI PD+
Sbjct: 334 KIGRVDAAKDLFYRIP----KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDV 389
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
+YN++I + +G + A +L++M KG + ++ ++ L+ GF G+ +A +
Sbjct: 390 CTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNE 449
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG------ 277
M ++PN +N + E + +A+E+ EM K PDV+TF +LI G
Sbjct: 450 MSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDE 509
Query: 278 -----------------------------FVNEGNLEEAKRWYNK---SGCGMNKAIFKL 305
F+ G ++EA++ N+ G +++ +
Sbjct: 510 IKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNS 569
Query: 306 LVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA----KELVELG 361
L+ +C G++D A +L ++ + ++++ L + VEEA KE+V G
Sbjct: 570 LIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRG 629
Query: 362 KTNSYCRYN 370
T +N
Sbjct: 630 STPDIVTFN 638
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 115/260 (44%), Gaps = 4/260 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI Y K + A +V +M + C+ V S+ L+ K DE + ++
Sbjct: 395 LIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSAD- 453
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++P+ V +N +I AF + + A + EM +KG + D+ TFN+L+ G A
Sbjct: 454 GLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHA 513
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ M++ V N +YN ++ + K+A +LV EM + D T+ +LIKG
Sbjct: 514 LWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKG 573
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
G +++A+ + K G + +L+ +C G ++ A K D
Sbjct: 574 LCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPD 633
Query: 335 QAPLQLVVDRLAKELRVEEA 354
+++ L + R+E+
Sbjct: 634 IVTFNSLINGLCRAGRIEDG 653
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 114/259 (44%), Gaps = 6/259 (2%)
Query: 36 NLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFT 95
N+ ++ F + +R + +Y + +L F+ I+ +L K + KE
Sbjct: 90 NVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLF 149
Query: 96 ARLIALYGKAAMFENARKVFDEMPGRN---CEQTVLSFNALLGACVNSKKFDEVDGLFKD 152
++ Y KA ++ EM RN CE T S+N +L V+ +F D
Sbjct: 150 ISIMRDYDKAGFPGQTTRLMLEM--RNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYD 207
Query: 153 LPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNG 212
+ + I P L ++ ++KAF +DSA +LL +M K G + + + TL+
Sbjct: 208 MLSR-KIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCN 266
Query: 213 RFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFY 272
R +A ++ E M M P+ ++N + GL + +A ++V M + PD T+
Sbjct: 267 RVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYG 326
Query: 273 ALIKGFVNEGNLEEAKRWY 291
L+ G G ++ AK +
Sbjct: 327 YLMNGLCKIGRVDAAKDLF 345
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 95/215 (44%), Gaps = 8/215 (3%)
Query: 41 VDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTA---- 96
VD+ K + L R + G+ TV F EI E +K ++ +G
Sbjct: 507 VDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEIT 566
Query: 97 --RLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLP 154
LI +A + AR +F++M + +S N L+ S +E K++
Sbjct: 567 YNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMV 626
Query: 155 HKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRF 214
+ G PD+V++N++I G ++ T+ +++ +GI D +TFNTL+ G
Sbjct: 627 LR-GSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFV 685
Query: 215 ADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQT 249
DA + + + PN R+++ L + I ++T
Sbjct: 686 YDACLLLDEGIEDGFVPNHRTWSILLQSI-IPQET 719
>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
Length = 948
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 138/322 (42%), Gaps = 51/322 (15%)
Query: 92 EGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEV-DGLF 150
+G+ + GK + AR + ++P N TVL +N L+ V S +F+E D L+
Sbjct: 308 QGYLMHGLCRMGKV---DEARAMLSKIPNPN---TVL-YNTLINGYVVSGRFEEAKDLLY 360
Query: 151 KDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYS 210
K++ G EPD ++N +I KG L SA L EM KKG ++IT+ L+ GF
Sbjct: 361 KNMVIA-GFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCK 419
Query: 211 NGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
G F +A K+ +M + N YN + L + + + AL++ GEM SK PD++T
Sbjct: 420 QGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYT 479
Query: 271 FYALIKGFVNEGNLEEAKRWYNK------------------------------------- 293
F +LI G +EEA Y
Sbjct: 480 FNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMR 539
Query: 294 -SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVE 352
GC ++ + L+ +C+ G + L ++ F E ++++ + +V
Sbjct: 540 FRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVN 599
Query: 353 EA----KELVELGKTNSYCRYN 370
+A +++++ G T YN
Sbjct: 600 DALQFLRDMIQRGLTPDIVTYN 621
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 156/358 (43%), Gaps = 45/358 (12%)
Query: 41 VDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIA 100
+D F+K+ + + +Y + +L N F+ I+++L+ K + KE ++
Sbjct: 78 MDLFEKAGLQRGYIHSFHVYYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMR 137
Query: 101 LYGKAAMFENARKVFDEMPGRNC-EQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGI 159
YGKA + A ++ +M G C E T S+N +L V +F D+ + GI
Sbjct: 138 YYGKAGLPGQATRLLLDMWGVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSR-GI 196
Query: 160 EPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEK 219
P + ++ ++KAF +DSA +LL +M K G + I + L+ N R +A K
Sbjct: 197 SPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMK 256
Query: 220 IWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALEL------------------------ 255
+ E M M P+V+++N + GL + +A +L
Sbjct: 257 LLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLC 316
Query: 256 ----VGEMR---SKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK----SGCGMNKAIFK 304
V E R SK NP+ + LI G+V G EEAK K +G + F
Sbjct: 317 RMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFN 376
Query: 305 LLVPFVCEKG----DLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
+++ +C+KG L+F + K+ F + +++D K+ EEA ++V
Sbjct: 377 IMIDGLCKKGYLVSALEFLDEMVKKGFEPNVIT----YTILIDGFCKQGHFEEASKVV 430
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 132/304 (43%), Gaps = 16/304 (5%)
Query: 53 FRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTAR------LIALYGKAA 106
F N YT + F E K +S +G + LI K
Sbjct: 403 FEPNVITYTILIDGFCKQGHFE------EASKVVNSMSAKGLSLNTVGYNCLIGALCKDG 456
Query: 107 MFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSY 166
++A +++ EM + C+ + +FN+L+ + K +E GL++D+ + G+ + V+Y
Sbjct: 457 KIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLE-GVIANTVTY 515
Query: 167 NTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVN 226
NT+I AF+ + A+ L+ EM +G LD IT+N L+ G + E M
Sbjct: 516 NTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFG 575
Query: 227 MNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEE 286
+ P++ S N ++ + AL+ + +M + + PD+ T+ +LI G G +E
Sbjct: 576 EEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQE 635
Query: 287 AKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVD 343
A +N G + + L+ C +G + A L + S + ++ ++++
Sbjct: 636 ALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILIN 695
Query: 344 RLAK 347
K
Sbjct: 696 YFVK 699
>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
Length = 948
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 106/199 (53%), Gaps = 2/199 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI Y KA A + E+ V +++ L+ + +E DGL +++ K
Sbjct: 339 LIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKK- 397
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G P+ V+YNT+I + +G+++ A + +M +KGI ++ITF+TL+ G+ G+ A
Sbjct: 398 GFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAA 457
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ MV + P+V +Y A +DG + TK+A L EM+ ++P+VFT LI G
Sbjct: 458 MGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDG 517
Query: 278 FVNEGNLEEA-KRWYNKSG 295
+G + +A K + K+G
Sbjct: 518 LCKDGRISDAIKLFLAKTG 536
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 153/362 (42%), Gaps = 20/362 (5%)
Query: 15 TATATGPKFI--GSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKR 72
A P + G++I G ++ + + F + + F T IYT ++ L R
Sbjct: 185 VARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVV-IYTILIRGLCGESR 243
Query: 73 FRWIEEILEHQKQYKDISKEGFTARLIAL------YGKAAMFENARKVFDEMPGRNCEQT 126
I E + ++ + G L Y K A + A +++ EM G
Sbjct: 244 ------ISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPN 297
Query: 127 VLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLL 186
V++F L+ + + D+ G+ P++ YN +I + G+L A +L
Sbjct: 298 VVTFGILIDGLCKTDEMVSARKFLIDMA-SFGVVPNIFVYNCLIDGYCKAGNLSEALSLH 356
Query: 187 YEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIE 246
E+EK I D+ T++ L+ G R +A+ + + M PN +YN +DG E
Sbjct: 357 SEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKE 416
Query: 247 KQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIF 303
+KA+E+ +M K I P++ TF LI G+ G +E A Y + G + +
Sbjct: 417 GNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAY 476
Query: 304 KLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKT 363
L+ + G+ AF L K + L ++D L K+ R+ +A +L L KT
Sbjct: 477 TALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLF-LAKT 535
Query: 364 NS 365
+
Sbjct: 536 GT 537
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 120/265 (45%), Gaps = 7/265 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + + + E A V+ +M Q N +L V +FD + ++ D+ +
Sbjct: 132 LIIAFSEMGLVEEALWVYYKMDVLPAMQAC---NMVLDGLVKKGRFDTMWKVYGDMVAR- 187
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G P++V+Y T+I +G A L EM +K I ++ + L+ G R ++A
Sbjct: 188 GASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEA 247
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
E ++ TM N + PN+ +YN +DG KKALEL EM + P+V TF LI G
Sbjct: 248 ESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDG 307
Query: 278 FVNEGNLEEAKRW---YNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
+ A+++ G N ++ L+ C+ G+L A +L L D
Sbjct: 308 LCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPD 367
Query: 335 QAPLQLVVDRLAKELRVEEAKELVE 359
+++ L R+EEA L++
Sbjct: 368 VFTYSILIKGLCGVDRMEEADGLLQ 392
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 93/211 (44%), Gaps = 12/211 (5%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI++Y +A +FDE+P +N ++S+ +++ A V++++ ++ LF+ +
Sbjct: 672 LISMYSATGNVADAHNMFDEIPSKN----LISWTSVISAYVDNQRPNKALQLFRQMQMD- 726
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
++PD+V+ + A D G+LD + + +G+ DL N+L+ + G A
Sbjct: 727 DVQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTA 786
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK-EINPDVFTFYALIK 276
+ V PN ++ L + ++ + M+ + P + F ++
Sbjct: 787 RRFSL------VLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGCMVD 840
Query: 277 GFVNEGNLEEAKRWYNKSGCGMNKAIFKLLV 307
G L EA + K N +++ L+
Sbjct: 841 LLCRAGLLTEAYEFILKMPVRPNAVVWRTLL 871
>gi|255582955|ref|XP_002532248.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528066|gb|EEF30142.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 521
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 144/297 (48%), Gaps = 5/297 (1%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++++ YK + +R+++ F + R + + + + L +K+ ++ L + +
Sbjct: 132 NLMKHFYKSSLHERVLEMFYAIQPIVREKPSLKAISTCLNILVESKQIDLAQKCLLYVNE 191
Query: 86 YKDISKEGFTAR-LIALYGKAAMFENARKVFDEMP-GRNCEQTVLSFNALLGACVNSKKF 143
+ + L+ + K+ E+A +V EM R V++++ L+ + +
Sbjct: 192 HLKVRPNTCIFNILVKHHCKSGDLESALEVMHEMKKSRRSYPNVITYSTLIDGLCGNGRL 251
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT 203
E LF+++ K I PD ++Y+ +IK F G D A ++ M G ++ ++
Sbjct: 252 KEAIELFEEMVSKDQILPDALTYSVLIKGFCHGGKADRARKIMEFMRSNGCDPNVFNYSV 311
Query: 204 LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
L+ GF GR +A+++++ M + ++P+ Y ++ + +A+EL+ EM +
Sbjct: 312 LMNGFCKEGRLEEAKEVFDEMKSSGLKPDTVGYTTLINCFCGVGRIDEAMELLKEMTEMK 371
Query: 264 INPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLD 317
D TF L+KG EG +EA R G +NK +++++ F+C+KG+L+
Sbjct: 372 CKADAVTFNVLLKGLCREGRFDEALRMLENLAYEGVYLNKGSYRIVLNFLCQKGELE 428
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 127/300 (42%), Gaps = 5/300 (1%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
+++ K +L+ ++ + R N Y+ + L R + E+ E
Sbjct: 205 LVKHHCKSGDLESALEVMHEMKKSRRSYPNVITYSTLIDGLCGNGRLKEAIELFEEMVSK 264
Query: 87 KDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
I + T + LI + + ARK+ + M C+ V +++ L+ + +E
Sbjct: 265 DQILPDALTYSVLIKGFCHGGKADRARKIMEFMRSNGCDPNVFNYSVLMNGFCKEGRLEE 324
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
+F ++ G++PD V Y T+I F G +D A LL EM + + D +TFN LL
Sbjct: 325 AKEVFDEMKSS-GLKPDTVGYTTLINCFCGVGRIDEAMELLKEMTEMKCKADAVTFNVLL 383
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEIN 265
G GRF +A ++ E + V N SY L+ L + + +K+ L+G M S+
Sbjct: 384 KGLCREGRFDEALRMLENLAYEGVYLNKGSYRIVLNFLCQKGELEKSCALLGLMLSRGFV 443
Query: 266 PDVFTFYALIKGFVNEGNLEEAKRW---YNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
P T L+ G ++ A + G + L+ ++C + L F F L
Sbjct: 444 PHYATSNELLVCLCEAGMVDNAVTALFGLTQMGFTPEPKSWAHLIEYICRERKLLFVFEL 503
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 149/362 (41%), Gaps = 80/362 (22%)
Query: 13 STTATATG--PKFIG--SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLA 68
S+T TG KFI S I I +E + + ++ F + F N Y+ + +LA
Sbjct: 44 SSTLVETGRKCKFISHESAINLIKREKDPQHALEIFNMVGEQKGFNHNHATYSTLIHKLA 103
Query: 69 NAKRFRWIEEILEHQKQYKDIS-KEGFTARLIALYGKAAMFENARKVFDEM-PGRNCEQT 126
K+F ++ +L HQ Y+ E L+ + K+++ E ++F + P + +
Sbjct: 104 QTKKFHAVDALL-HQMTYETCKFHENIFLNLMKHFYKSSLHERVLEMFYAIQPIVREKPS 162
Query: 127 VLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLL 186
+ + + L V SK+ D + L + P+ +N ++K G L+SA ++
Sbjct: 163 LKAISTCLNILVESKQIDLAQKCLLYVNEHLKVRPNTCIFNILVKHHCKSGDLESALEVM 222
Query: 187 YEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIE 246
+EM+K + PNV +Y+ +DGL
Sbjct: 223 HEMKK----------------------------------SRRSYPNVITYSTLIDGLCGN 248
Query: 247 KQTKKALELVGEMRSK-EINPDVFTFYALIKGFVNEGNLEEAKR---WYNKSGCGMNKAI 302
+ K+A+EL EM SK +I PD T+ LIKGF + G + A++ + +GC N
Sbjct: 249 GRLKEAIELFEEMVSKDQILPDALTYSVLIKGFCHGGKADRARKIMEFMRSNGCDPNVFN 308
Query: 303 FKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGK 362
+ +L+ C++G R+EEAKE+ + K
Sbjct: 309 YSVLMNGFCKEG-----------------------------------RLEEAKEVFDEMK 333
Query: 363 TN 364
++
Sbjct: 334 SS 335
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 74/171 (43%), Gaps = 2/171 (1%)
Query: 93 GFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKD 152
G+T LI + + A ++ EM C+ ++FN LL +FDE + ++
Sbjct: 343 GYTT-LINCFCGVGRIDEAMELLKEMTEMKCKADAVTFNVLLKGLCREGRFDEALRMLEN 401
Query: 153 LPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNG 212
L ++ G+ + SY ++ KG L+ + LL M +G T N LL+ G
Sbjct: 402 LAYE-GVYLNKGSYRIVLNFLCQKGELEKSCALLGLMLSRGFVPHYATSNELLVCLCEAG 460
Query: 213 RFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
+A + M P +S+ ++ + E++ ELV E+ KE
Sbjct: 461 MVDNAVTALFGLTQMGFTPEPKSWAHLIEYICRERKLLFVFELVDELVEKE 511
>gi|357122825|ref|XP_003563115.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Brachypodium distachyon]
Length = 410
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 137/301 (45%), Gaps = 5/301 (1%)
Query: 63 TVQRLANAKRFRWIEEILEHQKQYKDISKE-GFTARLIALYGKAAMFENARKVFDEMPGR 121
V+RL+ A R +L + D + + L+ Y ++ A++VFD MP
Sbjct: 8 AVRRLSAAGEVRSALALLARGAKAGDTTLDVAACTALVHGYCRSGDVAEAQRVFDVMPRL 67
Query: 122 NCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDS 181
++F AL+ + ++ LF+ + GIEP+L +YN ++ + G +
Sbjct: 68 GLTPNEVTFTALIHGYFIHGRREKGLALFEKMRIG-GIEPNLYTYNILVGEWCRTGEFER 126
Query: 182 ANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLD 241
A L EM KGI +++++NTL+ G + DA ++ E M +RP+V ++N +D
Sbjct: 127 ARLLFEEMPAKGITRNVVSYNTLIAGLCRYRKMKDATQLLELMRREGIRPSVVTFNLLVD 186
Query: 242 GLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGM 298
G + AL +MR P T+ ALI GF ++ A R ++ + G
Sbjct: 187 GYGKAGKMSNALHFSNQMRMAGYQPSAVTYNALIAGFCRARDMIRANRAFSDMKERGLAP 246
Query: 299 NKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
K + +L+ + D+D AF + VD ++V L E +++A++L
Sbjct: 247 TKVTYTILIDAFARENDMDKAFEMFAGMEKAGLEVDVRTYGVLVHALCMEGNMKDARKLF 306
Query: 359 E 359
+
Sbjct: 307 Q 307
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 118/265 (44%), Gaps = 4/265 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+ + + FE AR +F+EMP + + V+S+N L+ +K + L +L +
Sbjct: 114 LVGEWCRTGEFERARLLFEEMPAKGITRNVVSYNTLIAGLCRYRKMKDATQLL-ELMRRE 172
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
GI P +V++N ++ + G + +A +M G + +T+N L+ GF A
Sbjct: 173 GIRPSVVTFNLLVDGYGKAGKMSNALHFSNQMRMAGYQPSAVTYNALIAGFCRARDMIRA 232
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ + M + P +Y +D A E KA E+ M + DV T+ L+
Sbjct: 233 NRAFSDMKERGLAPTKVTYTILIDAFARENDMDKAFEMFAGMEKAGLEVDVRTYGVLVHA 292
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
EGN+++A++ + + G + I+ +L+ +G A L + + +
Sbjct: 293 LCMEGNMKDARKLFQSIGEKGLQVGNVIYDMLIYGYGREGSSYKAMKLIMEMRKKGFVPN 352
Query: 335 QAPLQLVVDRLAKELRVEEAKELVE 359
A L + L + + EA+ L++
Sbjct: 353 SASYGLTIRILCNDGKCSEAEALID 377
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 74/162 (45%), Gaps = 1/162 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LIA + +A A + F +M R T +++ L+ A D+ +F + K
Sbjct: 219 LIAGFCRARDMIRANRAFSDMKERGLAPTKVTYTILIDAFARENDMDKAFEMFAGM-EKA 277
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+E D+ +Y ++ A +G++ A L + +KG+++ + ++ L+ G+ G A
Sbjct: 278 GLEVDVRTYGVLVHALCMEGNMKDARKLFQSIGEKGLQVGNVIYDMLIYGYGREGSSYKA 337
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
K+ M PN SY + L + + +A L+ +M
Sbjct: 338 MKLIMEMRKKGFVPNSASYGLTIRILCNDGKCSEAEALIDDM 379
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 33/161 (20%), Positives = 71/161 (44%), Gaps = 7/161 (4%)
Query: 78 EILEHQKQYKDISKEGFTAR------LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFN 131
+++ + + D+ + G LI + + + A ++F M E V ++
Sbjct: 228 DMIRANRAFSDMKERGLAPTKVTYTILIDAFARENDMDKAFEMFAGMEKAGLEVDVRTYG 287
Query: 132 ALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEK 191
L+ A + LF+ + K G++ V Y+ +I + +GS A L+ EM K
Sbjct: 288 VLVHALCMEGNMKDARKLFQSIGEK-GLQVGNVIYDMLIYGYGREGSSYKAMKLIMEMRK 346
Query: 192 KGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPN 232
KG + ++ + ++G+ ++AE + + MV V+ +
Sbjct: 347 KGFVPNSASYGLTIRILCNDGKCSEAEALIDDMVRAGVQTS 387
>gi|356540375|ref|XP_003538665.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Glycine max]
Length = 1476
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 126/257 (49%), Gaps = 10/257 (3%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL---GACVNSKKFDEVDGLFKDLP 154
LI+ + + E A VF +M C+ + ++NA++ G C ++K +E LFK+L
Sbjct: 327 LISACSRESNLEEAVAVFSDMESHRCQPDLWTYNAMISVYGRCARARKAEE---LFKELE 383
Query: 155 HKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRF 214
K G PD V+YN+++ AF +G+ + + EM K+G D +T+NT++ + GR
Sbjct: 384 SK-GFFPDAVTYNSLLYAFSREGNTEKVRDICEEMVKRGFGQDEMTYNTIIHMYGKQGRH 442
Query: 215 ADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYAL 274
A +I+ M + P+ +Y +D L + ++A ++ EM + P + T+ AL
Sbjct: 443 DQAMQIYRDMKSSGRNPDAVTYTVLIDSLGKASKVEEAANVMSEMLDAGVKPTLHTYSAL 502
Query: 275 IKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERC 331
I + G EEA+ +N +SG ++ + +++ F ++ A L E
Sbjct: 503 ICAYAKAGKREEAEETFNCMRRSGIKPDRLAYSVMLDFFLRFNEMKKAMGLYHEMIREGF 562
Query: 332 LVDQAPLQLVVDRLAKE 348
D ++++ L +E
Sbjct: 563 TPDNGLYEVMMHALVRE 579
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 111/229 (48%), Gaps = 4/229 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGL-FKDLPHK 156
++ +Y + F +++ D M R C ++SFN L+ A + S + L + +
Sbjct: 255 MMGVYARNGRFSKVKELLDLMRERGCVPDLVSFNTLINARMKSGAMEPNLALQLLNEVRR 314
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
GI PD+++YNT+I A + +L+ A + +ME + DL T+N ++ + R
Sbjct: 315 SGIRPDIITYNTLISACSRESNLEEAVAVFSDMESHRCQPDLWTYNAMISVYGRCARARK 374
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
AE++++ + + P+ +YN+ L + E T+K ++ EM + D T+ +I
Sbjct: 375 AEELFKELESKGFFPDAVTYNSLLYAFSREGNTEKVRDICEEMVKRGFGQDEMTYNTIIH 434
Query: 277 GFVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
+ +G ++A + Y SG + + +L+ + + ++ A N+
Sbjct: 435 MYGKQGRHDQAMQIYRDMKSSGRNPDAVTYTVLIDSLGKASKVEEAANV 483
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 114/263 (43%), Gaps = 39/263 (14%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI Y + +E AR +F+ M TV S N LL A + ++ +E+ + ++L +
Sbjct: 815 LIHAYAFSGCYERARAIFNTMMRDGPSPTVDSVNGLLQALIVDRRLNELYVVIQEL-QDM 873
Query: 158 GIEPDLVSYNTIIKAFVDKGSL-----------------------------------DSA 182
G++ S ++AF G+L
Sbjct: 874 GLKISKSSILLTLEAFAQAGNLFEVQKIYNGMKAAGYFPTMHVYRIMLRLLCKCKRVRDV 933
Query: 183 NTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDG 242
T+L EME+ G + DL N++L + F I++ + + +++P+ +YN +
Sbjct: 934 ETMLCEMEEAGFQPDLQICNSILKLYLGIEDFKSMGIIYQKIQDASLKPDEETYNTLIIM 993
Query: 243 LAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMN 299
+++ ++ L+ +MRS + P + T+ +LI F + E+A+ + + +G ++
Sbjct: 994 YCRDRRPEEGFSLMNKMRSLGLEPKLDTYRSLITAFNKQRMYEQAEELFEELRSNGYKLD 1053
Query: 300 KAIFKLLVPFVCEKGDLDFAFNL 322
+A + L++ GD A NL
Sbjct: 1054 RAFYHLMMKTYRTSGDHRKAENL 1076
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 92/233 (39%), Gaps = 40/233 (17%)
Query: 166 YNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNG------------- 212
YN ++ + G LL M ++G DL++FNTL+ +G
Sbjct: 252 YNAMMGVYARNGRFSKVKELLDLMRERGCVPDLVSFNTLINARMKSGAMEPNLALQLLNE 311
Query: 213 ------------------------RFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
+A ++ M + +P++ +YNA + +
Sbjct: 312 VRRSGIRPDIITYNTLISACSRESNLEEAVAVFSDMESHRCQPDLWTYNAMISVYGRCAR 371
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKL 305
+KA EL E+ SK PD T+ +L+ F EGN E+ + K G G ++ +
Sbjct: 372 ARKAEELFKELESKGFFPDAVTYNSLLYAFSREGNTEKVRDICEEMVKRGFGQDEMTYNT 431
Query: 306 LVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
++ ++G D A + + S D +++D L K +VEEA ++
Sbjct: 432 IIHMYGKQGRHDQAMQIYRDMKSSGRNPDAVTYTVLIDSLGKASKVEEAANVM 484
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/275 (18%), Positives = 109/275 (39%), Gaps = 41/275 (14%)
Query: 78 EILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGAC 137
E+LE +++ + T LI + KA + A + + ++ + +L+ C
Sbjct: 653 ELLEFSREHAPNDIQMITEALIIILCKAKKLDAALEEYRSKGELGQFRSCTMYESLIQEC 712
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGI--- 194
+ ++ FD +F D+ G+E Y ++ + ++A+ LLY EK GI
Sbjct: 713 IQNELFDVASQIFSDMRFN-GVESSECLYQGMVSVYCRMDLPETAHHLLYHAEKNGIILD 771
Query: 195 ----------------------------------RLDLITFNTLLLGFYSNGRFADAEKI 220
++D +N L+ + +G + A I
Sbjct: 772 NDISVYIDIVETYGKLKIWQKAESLVGSLRQRCSKMDRKVWNALIHAYAFSGCYERARAI 831
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
+ TM+ P V S N L L ++++ + ++ E++ + + ++ F
Sbjct: 832 FNTMMRDGPSPTVDSVNGLLQALIVDRRLNELYVVIQELQDMGLKISKSSILLTLEAFAQ 891
Query: 281 EGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCE 312
GNL E ++ YN +G ++++++ +C+
Sbjct: 892 AGNLFEVQKIYNGMKAAGYFPTMHVYRIMLRLLCK 926
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/235 (18%), Positives = 103/235 (43%), Gaps = 2/235 (0%)
Query: 51 GRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFEN 110
G F T +Y ++ L KR R +E +L ++ ++ LY F++
Sbjct: 909 GYFPT-MHVYRIMLRLLCKCKRVRDVETMLCEMEEAGFQPDLQICNSILKLYLGIEDFKS 967
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
++ ++ + + ++N L+ ++ +E L + LG+EP L +Y ++I
Sbjct: 968 MGIIYQKIQDASLKPDEETYNTLIIMYCRDRRPEEGFSLMNKM-RSLGLEPKLDTYRSLI 1026
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
AF + + A L E+ G +LD ++ ++ + ++G AE + M +
Sbjct: 1027 TAFNKQRMYEQAEELFEELRSNGYKLDRAFYHLMMKTYRTSGDHRKAENLLAIMKESGIE 1086
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLE 285
P + + + + Q ++A ++ +R+ + D + ++I ++ +G+ +
Sbjct: 1087 PTISTMHLLMVSYGKSGQPEEAENVLKNLRTTGVVLDTLPYSSVIDAYLKKGDFK 1141
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 83/180 (46%), Gaps = 1/180 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI +Y + E + ++M E + ++ +L+ A + +++ + LF++L
Sbjct: 990 LIIMYCRDRRPEEGFSLMNKMRSLGLEPKLDTYRSLITAFNKQRMYEQAEELFEELRSN- 1048
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G + D Y+ ++K + G A LL M++ GI + T + L++ + +G+ +A
Sbjct: 1049 GYKLDRAFYHLMMKTYRTSGDHRKAENLLAIMKESGIEPTISTMHLLMVSYGKSGQPEEA 1108
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
E + + + V + Y++ +D + K +E + EM+ I PD + I+
Sbjct: 1109 ENVLKNLRTTGVVLDTLPYSSVIDAYLKKGDFKAGIEKLTEMKEAGIEPDHRIWTCFIRA 1168
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/181 (19%), Positives = 77/181 (42%), Gaps = 3/181 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I +YGK + A +++ +M +++ L+ + + K +E + ++
Sbjct: 432 IIHMYGKQGRHDQAMQIYRDMKSSGRNPDAVTYTVLIDSLGKASKVEEAANVMSEM-LDA 490
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++P L +Y+ +I A+ G + A M + GI+ D + ++ +L F A
Sbjct: 491 GVKPTLHTYSALICAYAKAGKREEAEETFNCMRRSGIKPDRLAYSVMLDFFLRFNEMKKA 550
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS-KEINPDVFTFYALIK 276
++ M+ P+ Y + L E ++ +M +NP V + L+K
Sbjct: 551 MGLYHEMIREGFTPDNGLYEVMMHALVRENMWDVVDRIIRDMEELSGMNPQVIS-SVLVK 609
Query: 277 G 277
G
Sbjct: 610 G 610
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/272 (18%), Positives = 111/272 (40%), Gaps = 4/272 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
++ YGK +++ A + + R + +NAL+ A S ++ +F + +
Sbjct: 780 IVETYGKLKIWQKAESLVGSLRQRCSKMDRKVWNALIHAYAFSGCYERARAIFNTM-MRD 838
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G P + S N +++A + L+ ++ E++ G+++ + L F G +
Sbjct: 839 GPSPTVDSVNGLLQALIVDRRLNELYVVIQELQDMGLKISKSSILLTLEAFAQAGNLFEV 898
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+KI+ M P + Y L L K+ + ++ EM PD+ +++K
Sbjct: 899 QKIYNGMKAAGYFPTMHVYRIMLRLLCKCKRVRDVETMLCEMEEAGFQPDLQICNSILKL 958
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
++ + + Y K + ++ + L+ C + F+L + S
Sbjct: 959 YLGIEDFKSMGIIYQKIQDASLKPDEETYNTLIIMYCRDRRPEEGFSLMNKMRSLGLEPK 1018
Query: 335 QAPLQLVVDRLAKELRVEEAKELVELGKTNSY 366
+ ++ K+ E+A+EL E ++N Y
Sbjct: 1019 LDTYRSLITAFNKQRMYEQAEELFEELRSNGY 1050
>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 129/255 (50%), Gaps = 6/255 (2%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNAL-LGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
+A +++ EM + V++FN+L LG CV + E GLF ++ K I PD+ +++
Sbjct: 216 SDAYQLYSEMITKRISPDVVTFNSLILGFCV-VGQLKEAFGLFHEMVLK-NINPDVYTFS 273
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
++ A G++ A +L M K+G+ D++T+++L+ G+ A+ ++ TM +
Sbjct: 274 ILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRL 333
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
V P+ SYN ++GL K +AL L EM K I PD T+ +LI G G + A
Sbjct: 334 GVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYA 393
Query: 288 KRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDR 344
+ ++ +G + + L+ +C+ +D A L K+ + +++D
Sbjct: 394 WQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDG 453
Query: 345 LAKELRVEEAKELVE 359
L K R++ A+++ +
Sbjct: 454 LCKGGRLKNAQDVFQ 468
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 130/287 (45%), Gaps = 15/287 (5%)
Query: 80 LEHQKQYKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GAC 137
L HQ + K I+ T L+ Y A +F ++ T ++FN L+ G C
Sbjct: 81 LSHQLELKGITPTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGIC 140
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLD 197
+N K + + F D LG D VSY T+I G +A +L ++E K + D
Sbjct: 141 LNGKLKEALH--FHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTD 198
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
++ +N ++ + +DA +++ M+ + P+V ++N+ + G + Q K+A L
Sbjct: 199 VVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFH 258
Query: 258 EMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKG 314
EM K INPDV+TF L+ +GN+ AK K G + + L+ C
Sbjct: 259 EMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVN 318
Query: 315 DLDFAFNLCKRTFSERCLVDQAP----LQLVVDRLAKELRVEEAKEL 357
+++ A K FS + AP ++++ L K V+EA L
Sbjct: 319 EVNKA----KHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSL 361
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 117/262 (44%), Gaps = 13/262 (4%)
Query: 40 LVDKFKKSSDLGRFRT------NTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEG 93
LVD K ++ R + G+ V + + + E+ + + + +S+ G
Sbjct: 275 LVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLG 334
Query: 94 FTAR------LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVD 147
+I GK M + A +F EM + +++N+L+ +
Sbjct: 335 VAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAW 394
Query: 148 GLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLG 207
L ++ H GI D+++YN++I +D A L+ +++ +GI+ + T+N L+ G
Sbjct: 395 QLVDEM-HNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDG 453
Query: 208 FYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPD 267
GR +A+ +++ ++ N +YN ++GL E +A L+ +M + I PD
Sbjct: 454 LCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPD 513
Query: 268 VFTFYALIKGFVNEGNLEEAKR 289
T+ +I+ + E+A++
Sbjct: 514 AVTYETIIRALFRKDENEKAEK 535
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 73/149 (48%), Gaps = 1/149 (0%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A ++ DEM +L++N+L+ + D+ L K + + GI+P + +YN +I
Sbjct: 393 AWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQ-GIQPSMYTYNILI 451
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
G L +A + ++ KG ++ T+N ++ G G F +AE + M N +
Sbjct: 452 DGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGII 511
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEM 259
P+ +Y + L + + +KA +L+ EM
Sbjct: 512 PDAVTYETIIRALFRKDENEKAEKLLREM 540
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 97/240 (40%), Gaps = 40/240 (16%)
Query: 161 PDLVSYNTIIKAFV--DKGSLDSANTLLYEMEKKGIRLDL-------------------- 198
P +V +N I+ + V + +A +L +++E KGI +
Sbjct: 55 PSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGITPTIVTFNILVNCYCHLGEMTFAF 114
Query: 199 ---------------ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
ITFNTL+ G NG+ +A + ++ + + SY ++GL
Sbjct: 115 SIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGL 174
Query: 244 AIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNK 300
+T+ AL+++ ++ K +N DV + +I + + +A + Y++ +
Sbjct: 175 CKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDV 234
Query: 301 AIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVEL 360
F L+ C G L AF L + D ++VD L K+ + AK ++ +
Sbjct: 235 VTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAV 294
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 57/128 (44%), Gaps = 1/128 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K + A + ++ + + ++ ++N L+ + +F+DL K
Sbjct: 415 LIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIK- 473
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G + +YN +I +G + A LL +ME GI D +T+ T++ + A
Sbjct: 474 GYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKA 533
Query: 218 EKIWETMV 225
EK+ M+
Sbjct: 534 EKLLREMI 541
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K +NA+ VF ++ + ++N ++ F+E + L + + GI PD
Sbjct: 456 KGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENN-GIIPDA 514
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRL 196
V+Y TII+A K + A LL EM +G+ L
Sbjct: 515 VTYETIIRALFRKDENEKAEKLLREMIIRGLLL 547
>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g74580-like [Cucumis
sativus]
Length = 877
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 123/257 (47%), Gaps = 5/257 (1%)
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
+ A + Y + E A +FDEM + +L+FN L+ E + LF +
Sbjct: 184 YCAVISGFYKENCQIE-AYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKV 242
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
K G+ P+L ++N I+ KG++D A LL + +G+ D+I++NTL+ GF + +
Sbjct: 243 -MKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSK 301
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
+AE MVN V PN +YN ++G + A +++ + K PD FT+ +
Sbjct: 302 LVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSS 361
Query: 274 LIKGFVNEGNLEEAKRWYNKS---GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSER 330
LI G N+G++ A + ++ G + ++ LV + ++G + A L K
Sbjct: 362 LINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHG 421
Query: 331 CLVDQAPLQLVVDRLAK 347
C D LVV+ L K
Sbjct: 422 CSPDIWTYNLVVNGLCK 438
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 121/261 (46%), Gaps = 5/261 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+ K + A ++ +M C + ++N ++ + +G+ D K
Sbjct: 397 LVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAK- 455
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G PD+ ++NT+I + + ++D A +L M GI D+IT+NTLL G + +
Sbjct: 456 GCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNV 515
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ M+ PN+ +YN ++ +++ +A+EL EM+++ + PD+ T LI G
Sbjct: 516 VDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICG 575
Query: 278 FVNEGNLEEAKRWY----NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV 333
+ G L++A + + + AIF +++ C K ++ A L + C
Sbjct: 576 LCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAP 635
Query: 334 DQAPLQLVVDRLAKELRVEEA 354
D ++++D K ++ A
Sbjct: 636 DNYTYRVMIDSYCKTGNIDLA 656
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 145/336 (43%), Gaps = 43/336 (12%)
Query: 18 ATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIE 77
A PK + +VIR Y+ + L L F + F+ Y +++L +F +E
Sbjct: 4 ALQPKHVAAVIR--YQNDPLNAL-KMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAME 60
Query: 78 EIL-EHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGA 136
++L E +K EG ++ YG+ + A VF+ M +CE +V S+NA++
Sbjct: 61 DVLAEMRKNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNI 120
Query: 137 CVNSKKFDEVDGLFKDLPHKLGIEPDL--------------------------------- 163
V F + ++ + +GI PD+
Sbjct: 121 LVEYGYFSQAHKVYMRMK-DIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEF 179
Query: 164 --VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
VSY +I F + A L EM K+GI D++TFN L+ G ++EK++
Sbjct: 180 NAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLF 239
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
++ V PN+ ++N + GL + +A L+ + S+ + PDV ++ LI GF
Sbjct: 240 SKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKH 299
Query: 282 GNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKG 314
L EA+ + +K SG N+ + ++ C+ G
Sbjct: 300 SKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAG 335
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 128/294 (43%), Gaps = 10/294 (3%)
Query: 79 ILEHQKQYKDISKEGFTARLIAL------YGKAAMFENARKVFDEMPGRNCEQTVLSFNA 132
I E + + I EG T +I+ + K + A +M E ++N
Sbjct: 267 IDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNT 326
Query: 133 LLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKK 192
++ + D + +D K G PD +Y+++I + G ++ A + YE +K
Sbjct: 327 IINGFCKAGMMQNADKILRDAMFK-GFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEK 385
Query: 193 GIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKA 252
G + +I +NTL+ G G A ++ + M+ P++ +YN ++GL A
Sbjct: 386 GFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDA 445
Query: 253 LELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPF 309
++ + +K PD+FTF LI G+ + N+++A + G + + L+
Sbjct: 446 NGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNG 505
Query: 310 VCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKT 363
+C+ LD + K + C + ++++ K+ +V EA EL + KT
Sbjct: 506 LCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKT 559
>gi|255660796|gb|ACU25567.1| pentatricopeptide repeat-containing protein [Verbena litoralis]
Length = 418
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 144/313 (46%), Gaps = 4/313 (1%)
Query: 5 SRLLSCSFSTTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTV 64
S + + T T ++ S + Y E+ R + + + +FR +
Sbjct: 49 SAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVL 108
Query: 65 QRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCE 124
+ L K F+ + E + + F L+ + K A+ VFD + +
Sbjct: 109 EHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLR 168
Query: 125 QTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANT 184
+V+SFN L+ + DE L K+ G++PD+ +Y+ +I + +D AN
Sbjct: 169 PSVVSFNTLMNGYIKLGDLDEGFRL-KNAMQVSGVQPDVYTYSVLINGLCKESKMDDANX 227
Query: 185 LLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLA 244
L EM KG+ + +TF TL+ G NGR A +I++ M++ ++ P++ +YN + GL
Sbjct: 228 LFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLC 287
Query: 245 IEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA---KRWYNKSGCGMNKA 301
+ K+A +L+ EM K + PD T+ LI G EG+LE A ++ K ++
Sbjct: 288 KKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDV 347
Query: 302 IFKLLVPFVCEKG 314
+ L+ +C++G
Sbjct: 348 AYTALISGLCQEG 360
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 104/206 (50%), Gaps = 2/206 (0%)
Query: 80 LEHQKQYKDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACV 138
L++ Q + + +T + LI K + ++A +FDEM + ++F L+
Sbjct: 193 LKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANXLFDEMLDKGLVPNGVTFTTLIDGHC 252
Query: 139 NSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL 198
+ + D ++K + + + PDL++YNT+I KG L A L+ EM KG+ D
Sbjct: 253 KNGRVDLAMEIYKQMLSQ-SLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDK 311
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
IT+ TL+ G G A + + M+ N+R + +Y A + GL E ++ A +++ E
Sbjct: 312 ITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371
Query: 259 MRSKEINPDVFTFYALIKGFVNEGNL 284
M + + P++ T+ +I F +G++
Sbjct: 372 MLNVGLKPEIGTYTMIINEFCKKGDV 397
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 100/218 (45%), Gaps = 4/218 (1%)
Query: 102 YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEP 161
Y K + ++ + M + V +++ L+ K D+ + LF ++ K G+ P
Sbjct: 181 YIKLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANXLFDEMLDK-GLVP 239
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
+ V++ T+I G +D A + +M + + DLIT+NTL+ G G A+ +
Sbjct: 240 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLI 299
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
+ M+ + P+ +Y +DG E + A E M + I D + ALI G E
Sbjct: 300 DEMIMKGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQE 359
Query: 282 GNLEEAKRWYNKS-GCGMNKAI--FKLLVPFVCEKGDL 316
G +A++ + G+ I + +++ C+KGD+
Sbjct: 360 GRSVDAEKMLREMLNVGLKPEIGTYTMIINEFCKKGDV 397
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 82/173 (47%), Gaps = 1/173 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K + A +++ +M ++ ++++N L+ + L ++ K
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMK- 305
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ PD ++Y T+I +G L++A M K+ IRLD + + L+ G GR DA
Sbjct: 306 GLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDA 365
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
EK+ M+N+ ++P + +Y ++ + +L+ EM+ P V T
Sbjct: 366 EKMLREMLNVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 744
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 139/298 (46%), Gaps = 7/298 (2%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
S+I + K+ + + F + G + YT V L N ++ + +L
Sbjct: 201 SIIDSLCKDRQVTEAFNLFSQMVGQG-ISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVN 259
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFD 144
K + + ++ K A ++ D M R E V+++ L+ G C+ S+ D
Sbjct: 260 SKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSE-MD 318
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
E +F D+ + G PD++SY T+I + +D A L EM +K D T+NTL
Sbjct: 319 EAVKVF-DMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTL 377
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+ G GR DA ++ MV P++ +Y+ LD L ++A+ L+ + + +
Sbjct: 378 MHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNL 437
Query: 265 NPDVFTFYALIKGFVNEGNLEEAKRWY-NKSGCGMNKAI--FKLLVPFVCEKGDLDFA 319
NPD+ + +I G G LE A+ + N S G++ ++ + +++ +C++G L+ A
Sbjct: 438 NPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEA 495
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 32/205 (15%)
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
KLG +PD ++ T+I+ +G + A L +M +G + +++T+ TL+ G G +
Sbjct: 119 KLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTS 178
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
A ++ +M N +P+V Y + +D L ++Q +A L +M + I+PD+FT+ +L+
Sbjct: 179 AAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLV 238
Query: 276 KGFVNEGNLEEAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQ 335
N +CE + N + + + L D
Sbjct: 239 HALCN-----------------------------LCEWKHVTTLLN---QMVNSKILPDV 266
Query: 336 APLQLVVDRLAKELRVEEAKELVEL 360
VVD L KE +V EA E+V++
Sbjct: 267 VIFSTVVDALCKEGKVTEAHEIVDM 291
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 83/175 (47%), Gaps = 1/175 (0%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
++A +F EM R +++++ LL + + +E L K + + PD+ YN
Sbjct: 387 LQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEAS-NLNPDIQVYN 445
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
II G L++A L + KG+ + T+N ++ G G +A K++ M
Sbjct: 446 IIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGN 505
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEG 282
+ P+ +YN G +T +A++L+ EM ++ + DV T L++ ++G
Sbjct: 506 DCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEMLSDDG 560
>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 129/265 (48%), Gaps = 4/265 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+ + K NAR VFDE+ R +V+SFN L+ SK +E + K +
Sbjct: 232 LMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEE-GFVLKSVMESE 290
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
I PD+ +Y+ +I + ++ AN L EM + G+ + +TF TL+ G +G+ A
Sbjct: 291 RISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLA 350
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ +E M + +RP++ +YNA ++GL + K+A +L+ EM PD TF L+ G
Sbjct: 351 LRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDG 410
Query: 278 FVNEGNLEEA---KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
+G+++ A K + G ++ F L+ +C G + A + K S D
Sbjct: 411 CCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPD 470
Query: 335 QAPLQLVVDRLAKELRVEEAKELVE 359
+V+D K+ V+ +L++
Sbjct: 471 DPTYTMVIDCFCKKGDVKMGAKLLK 495
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 134/296 (45%), Gaps = 10/296 (3%)
Query: 73 FRWIEEILEHQKQYKDISKEGFTAR------LIALYGKAAMFENARKVFDEMPGRNCEQT 126
F I +++ + + +IS+ G LI+ Y ++ E + M
Sbjct: 236 FCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEGFVLKSVMESERISPD 295
Query: 127 VLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLL 186
V +++AL+ + +E +GLF ++ ++G+ P+ V++ T+I G +D A
Sbjct: 296 VFTYSALINGLCKESRVEEANGLFDEMC-EMGLVPNGVTFTTLIDGQCKHGKIDLALRNF 354
Query: 187 YEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIE 246
M+ +GIR DLIT+N L+ G +G +A K+ M+ +P+ ++ +DG +
Sbjct: 355 EIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKD 414
Query: 247 KQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIF 303
ALE+ M + I D F ALI G +G + +A+R +G + +
Sbjct: 415 GDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTY 474
Query: 304 KLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+++ C+KGD+ L K + + +++ K+ +++ AK L+
Sbjct: 475 TMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKMLLH 530
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 110/240 (45%), Gaps = 38/240 (15%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF--------- 208
G P++ +N ++ F G + +A + E+ ++G+R +++FNTL+ G+
Sbjct: 221 GYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEG 280
Query: 209 ------------------YS---NG-----RFADAEKIWETMVNMNVRPNVRSYNARLDG 242
YS NG R +A +++ M M + PN ++ +DG
Sbjct: 281 FVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDG 340
Query: 243 LAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMN 299
+ AL M+ + I PD+ T+ ALI G +G+L+EA++ N+ +G +
Sbjct: 341 QCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPD 400
Query: 300 KAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
K F L+ C+ GD+D A + R E +D ++ L ++ RV +A+ +++
Sbjct: 401 KITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLK 460
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 100/239 (41%), Gaps = 36/239 (15%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K + A + F+ M R ++++NAL+ E L ++ G +PD
Sbjct: 343 KHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGN-GFKPDK 401
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
+++ T++ G +DSA + M ++GI LD + F L+ G +GR DAE++ +
Sbjct: 402 ITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKD 461
Query: 224 MVNMNVRPN-----------------------------------VRSYNARLDGLAIEKQ 248
M++ +P+ V +YNA ++G + Q
Sbjct: 462 MLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQ 521
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKAIFKLLV 307
K A L+ M + E+ P+ TF L+ G G+ + K + + G + A + LV
Sbjct: 522 MKNAKMLLHAMLNMEVVPNDITFNILLDGHCKHGSSVDFKIFNGEKGLVSDYASYTALV 580
>gi|224130680|ref|XP_002320901.1| predicted protein [Populus trichocarpa]
gi|222861674|gb|EEE99216.1| predicted protein [Populus trichocarpa]
Length = 475
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 149/324 (45%), Gaps = 13/324 (4%)
Query: 44 FKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYG 103
F +S F+ + Y + +L AK F +I+++L K + +I +YG
Sbjct: 87 FDYASRQPNFQHSYSSYLILILKLGRAKYFSFIDDLLTDLKSKNYPVTPTLFSYIINIYG 146
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKF-DEVDGLFKDLPHKLGIEPD 162
+A + + A K+F + +C + N +L V+ + + LFKD H + P+
Sbjct: 147 EANLPDKALKIFYTILKFDCNPSPKHLNGILEILVSHQNYIKPAFDLFKDA-HTYDVFPN 205
Query: 163 LVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWE 222
SYN +I+AF G + A +L +M K+ + D+ ++ L+ + A + E
Sbjct: 206 TKSYNILIRAFCLNGQISMAYSLFNQMFKRDVMPDVESYRILMQALCRKSQVNGAVDLLE 265
Query: 223 TMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEG 282
M+N P+ SY L+ L +K+ ++A +L+ M+ K NPD+ + +I GF EG
Sbjct: 266 DMLNKGYVPDALSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIIHYNTVILGFCREG 325
Query: 283 NLEEAKRW---YNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQ 339
+A + +GC N ++ LV +C++G D A K E + +P
Sbjct: 326 RAMDACKVLEDMESNGCMPNLVSYRTLVGGLCDQGMFDEA----KSHLEEMMMKGFSPHF 381
Query: 340 LVVDRLAKEL----RVEEAKELVE 359
V + L K ++EEA +VE
Sbjct: 382 AVSNALIKGFCNVGKIEEACGVVE 405
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 108/223 (48%), Gaps = 7/223 (3%)
Query: 97 RLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHK 156
R L G+ +M A +F++M R+ V S+ L+ A + + L +D+ +K
Sbjct: 214 RAFCLNGQISM---AYSLFNQMFKRDVMPDVESYRILMQALCRKSQVNGAVDLLEDMLNK 270
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
G PD +SY T++ + K L A LL M+ KG D+I +NT++LGF GR D
Sbjct: 271 -GYVPDALSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIIHYNTVILGFCREGRAMD 329
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
A K+ E M + PN+ SY + GL + +A + EM K +P ALIK
Sbjct: 330 ACKVLEDMESNGCMPNLVSYRTLVGGLCDQGMFDEAKSHLEEMMMKGFSPHFAVSNALIK 389
Query: 277 GFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDL 316
GF N G +EEA K G + + ++V +CE DL
Sbjct: 390 GFCNVGKIEEACGVVEELLKHGEAPHTETWVMMVSRICEVDDL 432
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 80/176 (45%), Gaps = 4/176 (2%)
Query: 93 GFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFN-ALLGACVNSKKFDEVDGLFK 151
+T L +L K + E A K+ M + C ++ +N +LG C + D L +
Sbjct: 278 SYTTLLNSLCRKKKLRE-AYKLLCRMKVKGCNPDIIHYNTVILGFCREGRAMDACKVL-E 335
Query: 152 DLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSN 211
D+ G P+LVSY T++ D+G D A + L EM KG N L+ GF +
Sbjct: 336 DMESN-GCMPNLVSYRTLVGGLCDQGMFDEAKSHLEEMMMKGFSPHFAVSNALIKGFCNV 394
Query: 212 GRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPD 267
G+ +A + E ++ P+ ++ + + ++ E++ +++ E+ D
Sbjct: 395 GKIEEACGVVEELLKHGEAPHTETWVMMVSRICEVDDLQRIGEILDKVKKVELKGD 450
>gi|359484268|ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Vitis vinifera]
Length = 641
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 130/292 (44%), Gaps = 38/292 (13%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
+ A ++F+EM G C V+++N L+ + D L K+L K + PD+V+Y +
Sbjct: 254 DKAFELFNEMRGFGCSPDVITYNTLINGFCRVNEVDRGHDLLKELLSKNDLSPDVVTYTS 313
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
II + G ++ A+ L M GI+ + TFN L+ GF G AE ++E M+ +
Sbjct: 314 IISGYCKLGKMEKASILFNNMISSGIKPNAFTFNILINGFGKVGDMVSAENMYEEMLLLG 373
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
P++ ++ + +DG + +++L+L E+ ++ ++P+ +TF L E L EA+
Sbjct: 374 CPPDIITFTSLIDGHCRTGKVERSLKLWHELNARNLSPNEYTFAILTNALCKENRLHEAR 433
Query: 289 ------RW---------YN-------KSG----------------CGMNKAIFKLLVPFV 310
+W YN K+G C +K + +L+
Sbjct: 434 GFLRDLKWRHIVAQPFMYNPVIDGFCKAGNVDEANVILAEMEEKRCKPDKITYTILIIGH 493
Query: 311 CEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGK 362
C KG L A ++ R C D + ++ L K EA ++++
Sbjct: 494 CMKGRLSEAISIFNRMLGTGCAPDSITMTSLISCLLKAGMPNEAYRIMQIAS 545
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 119/255 (46%), Gaps = 14/255 (5%)
Query: 109 ENARKVFDEM--PGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSY 166
E+A+ V+D M G + + +VL F L+ + ++ KF+ + + D G+E LV Y
Sbjct: 154 ESAKAVYDCMNIDGHSPDASVLGF--LVSSATDAGKFN-IARTWVD-----GVEFSLVVY 205
Query: 167 NTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVN 226
N ++ V +D A E D +FN L+ G G+ A +++ M
Sbjct: 206 NKLLNQLVRGNQVDEAVCFFREQMGLHGPFDSCSFNILIRGLCRIGKVDKAFELFNEMRG 265
Query: 227 MNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK-EINPDVFTFYALIKGFVNEGNLE 285
P+V +YN ++G + + +L+ E+ SK +++PDV T+ ++I G+ G +E
Sbjct: 266 FGCSPDVITYNTLINGFCRVNEVDRGHDLLKELLSKNDLSPDVVTYTSIISGYCKLGKME 325
Query: 286 EAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVV 342
+A +N SG N F +L+ + GD+ A N+ + C D ++
Sbjct: 326 KASILFNNMISSGIKPNAFTFNILINGFGKVGDMVSAENMYEEMLLLGCPPDIITFTSLI 385
Query: 343 DRLAKELRVEEAKEL 357
D + +VE + +L
Sbjct: 386 DGHCRTGKVERSLKL 400
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 67/139 (48%), Gaps = 2/139 (1%)
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
FT+ LI + + E + K++ E+ RN +F L A + E G +DL
Sbjct: 381 FTS-LIDGHCRTGKVERSLKLWHELNARNLSPNEYTFAILTNALCKENRLHEARGFLRDL 439
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
+ + + YN +I F G++D AN +L EME+K + D IT+ L++G GR
Sbjct: 440 KWRHIVAQPFM-YNPVIDGFCKAGNVDEANVILAEMEEKRCKPDKITYTILIIGHCMKGR 498
Query: 214 FADAEKIWETMVNMNVRPN 232
++A I+ M+ P+
Sbjct: 499 LSEAISIFNRMLGTGCAPD 517
>gi|410109955|gb|AFV61057.1| pentatricopeptide repeat-containing protein 11, partial [Phyla
nodiflora]
Length = 431
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 141/299 (47%), Gaps = 14/299 (4%)
Query: 86 YKDISKEGFTARL------IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
Y++I + G+ A L + + K A+ VFD + +V+S+N L+ +
Sbjct: 130 YEEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIR 189
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
DE L K H G+ PD+ +Y+ +I + +D AN L EM +KG+ + +
Sbjct: 190 LGDLDEGFRL-KSAMHASGVHPDVYTYSVLINGLCKESKMDDANKLFDEMLEKGLVPNSV 248
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
TF TL+ G NG A +I++ M++ ++ P++ +YNA + GL + K+A +L+ EM
Sbjct: 249 TFTTLIDGHCKNGWVDLAMEIYKQMLSQSLLPDLVTYNALIYGLCKKGDLKQAHDLIDEM 308
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLE---EAKRWYNKSGCGMNKAIFKLLVPFVCEKGDL 316
+ PD T+ LI G EG+L+ E ++ + ++ + L+ +C++G
Sbjct: 309 SMXGLKPDKITYTTLIDGCCKEGDLDTAFEHRKMMIQENIRLDDVAYTALISGLCQEGRS 368
Query: 317 DFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA----KELVELGKTNSYCRYNL 371
A + + S D ++++ K+ V + KE+ G S YN+
Sbjct: 369 VDAEKMLREMLSVGLKPDTRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNV 427
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 89/180 (49%), Gaps = 1/180 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K + A +++ +M ++ ++++NAL+ + L ++
Sbjct: 253 LIDGHCKNGWVDLAMEIYKQMLSQSLLPDLVTYNALIYGLCKKGDLKQAHDLIDEMS-MX 311
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD ++Y T+I +G LD+A M ++ IRLD + + L+ G GR DA
Sbjct: 312 GLKPDKITYTTLIDGCCKEGDLDTAFEHRKMMIQENIRLDDVAYTALISGLCQEGRSVDA 371
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
EK+ M+++ ++P+ R+Y ++ + K +L+ EM+ P V T+ L+ G
Sbjct: 372 EKMLREMLSVGLKPDTRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 104/191 (54%), Gaps = 3/191 (1%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEPD 162
+ M AR VF+ M + E + ++NAL+ G C+ K +E +F+ + K G PD
Sbjct: 455 QEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCK-MNEARKVFEIMVGK-GCAPD 512
Query: 163 LVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWE 222
L SYN +I + + +D A LL +M K + + +T+NT++ G GR DA+++++
Sbjct: 513 LHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFK 572
Query: 223 TMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEG 282
M + + P + +Y+ L+GL +AL+L M+ K++ PD+ + LI+G G
Sbjct: 573 KMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGG 632
Query: 283 NLEEAKRWYNK 293
LE AK ++K
Sbjct: 633 KLEVAKGLFSK 643
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 108/214 (50%), Gaps = 4/214 (1%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K + +A EM GR +++N+++ + +E LFK + G +PD+
Sbjct: 245 KDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQN-GCKPDV 303
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
V+YN II + ++ A L EM +GI D++T+ T+L G G+ +A ++++
Sbjct: 304 VTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKK 363
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M +P+V +YN +D L ++ A+E + EM + I P+ T+ ++ GF N G
Sbjct: 364 MEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQ 423
Query: 284 LEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKG 314
L+EA + + + N F +LV +C++G
Sbjct: 424 LDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEG 457
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 114/252 (45%), Gaps = 4/252 (1%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A VF +M C+ V+++N ++ + + ++ ++ + GI PD ++YN+I+
Sbjct: 217 AVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGR-GIPPDAITYNSIV 275
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
G L+ A L ME+ G + D++T+N ++ Y + DA MV+ +
Sbjct: 276 HGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIP 335
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
P+V +Y L GL Q +A+ L +M K PDV + +I + + +A +
Sbjct: 336 PDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEF 395
Query: 291 YNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAK 347
++ G N + ++ C G LD A L K + + ++VD L +
Sbjct: 396 LSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQ 455
Query: 348 ELRVEEAKELVE 359
E V EA+ + E
Sbjct: 456 EGMVSEARWVFE 467
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 128/261 (49%), Gaps = 5/261 (1%)
Query: 100 ALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGI 159
+LY K + +A EM + V+++ +L + +E LFK + K G
Sbjct: 312 SLY-KDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQK-GC 369
Query: 160 EPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEK 219
+PD+V+YNTII + ++ A L EM +GI + +T++T+L GF + G+ +A +
Sbjct: 370 KPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQ 429
Query: 220 IWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFV 279
+++ MV NV PN +++ +DGL E +A + M K + P+++T+ AL+ G+
Sbjct: 430 LFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYC 489
Query: 280 NEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQA 336
+ EA++ + GC + + +L+ C +D A L + ++ +
Sbjct: 490 LRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTV 549
Query: 337 PLQLVVDRLAKELRVEEAKEL 357
++ L R+ +A+EL
Sbjct: 550 TYNTIMKGLCYVGRLLDAQEL 570
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 157/340 (46%), Gaps = 17/340 (5%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
+I +YK+ RLV+ ++D + GI V ++ ++ E + +
Sbjct: 309 IIDSLYKD----RLVND---AADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLF 361
Query: 87 KDISKEGFTARLIAL------YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNS 140
K + ++G ++A K + +A + EM R ++++ +L N
Sbjct: 362 KKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNL 421
Query: 141 KKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLIT 200
+ DE LFK++ + + P+ ++++ ++ +G + A + M +KG+ ++ T
Sbjct: 422 GQLDEATQLFKEMVGR-NVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYT 480
Query: 201 FNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMR 260
+N L+ G+ + +A K++E MV P++ SYN ++G ++ KA L+ +M
Sbjct: 481 YNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMS 540
Query: 261 SKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLD 317
K++ P+ T+ ++KG G L +A+ + K SG + +L+ +C+ G LD
Sbjct: 541 VKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLD 600
Query: 318 FAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
A L K ++ D ++++ + ++E AK L
Sbjct: 601 EALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGL 640
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 119/273 (43%), Gaps = 39/273 (14%)
Query: 125 QTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANT 184
TV S N L+ D ++ + KLGI+PD++++ T+I ++G + A
Sbjct: 126 HTVYSLNILINCLCRLNHVDFAVSVWGKM-FKLGIQPDVITFTTLINGVCNEGKIKVAVE 184
Query: 185 LLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLA 244
L EM + G D+I++NTL+ G ++G A +++ M +PNV +YN +D L
Sbjct: 185 LYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLC 244
Query: 245 IEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKA 301
++ A++ + EM + I PD T+ +++ G G L EA R + + +GC +
Sbjct: 245 KDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVV 304
Query: 302 IFKLLV-------------------------PFV----------CEKGDLDFAFNLCKRT 326
+ +++ P V C G L+ A L K+
Sbjct: 305 TYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKM 364
Query: 327 FSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ C D ++D L K+ V +A E +
Sbjct: 365 EQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLS 397
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 113/254 (44%), Gaps = 4/254 (1%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
++A F M N +++ F LG+ K++ V L + G+ + S N
Sbjct: 75 DDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQM-DLFGVTHTVYSLNI 133
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
+I +D A ++ +M K GI+ D+ITF TL+ G + G+ A +++ MV
Sbjct: 134 LINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSG 193
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
P+V SYN ++GL T A+ + +M P+V T+ +I + + +A
Sbjct: 194 HEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAM 253
Query: 289 RWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRL 345
+ ++ G + + +V +C G L+ A L KR C D +++D L
Sbjct: 254 DFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSL 313
Query: 346 AKELRVEEAKELVE 359
K+ V +A + +
Sbjct: 314 YKDRLVNDAADFLS 327
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 93/217 (42%), Gaps = 39/217 (17%)
Query: 74 RWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNAL 133
RW+ E + + +I + A + + M E ARKVF+ M G+ C + S+N L
Sbjct: 463 RWVFETMTEKGVEPNIYT--YNALMNGYCLRCKMNE-ARKVFEIMVGKGCAPDLHSYNIL 519
Query: 134 LGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKG 193
+ NS++ D+ L + K + P+ V+YNTI+K G L A L +M G
Sbjct: 520 INGYCNSRRMDKAKALLTQMSVK-KLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSG 578
Query: 194 IRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNV-------------------- 233
+ L+T++ LL G +G +A K++++M + P++
Sbjct: 579 MLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAK 638
Query: 234 ---------------RSYNARLDGLAIEKQTKKALEL 255
R+YN + GL E + +A EL
Sbjct: 639 GLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYEL 675
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 77/185 (41%), Gaps = 3/185 (1%)
Query: 178 SLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYN 237
S+D A Y M + R ++ F L +++ + M V V S N
Sbjct: 73 SVDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLN 132
Query: 238 ARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KS 294
++ L A+ + G+M I PDV TF LI G NEG ++ A YN +S
Sbjct: 133 ILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRS 192
Query: 295 GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA 354
G + + L+ +C G+ + A ++ K+ C + ++D L K+ V +A
Sbjct: 193 GHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDA 252
Query: 355 KELVE 359
+ +
Sbjct: 253 MDFLS 257
>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Cucumis sativus]
Length = 581
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 141/307 (45%), Gaps = 38/307 (12%)
Query: 53 FRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENAR 112
F+ + + T ++ N++ + ++E + Y D + A +I+ + KA ++A
Sbjct: 93 FKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYGDPDVYSYNA-MISGFSKANQIDSAN 151
Query: 113 KVFDEMPGRNCEQTVLSFNALLGACVNSKK----FDEVDGLFKD---------------- 152
+VFD M R V+++N ++G+ + K F+ +D L KD
Sbjct: 152 QVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTILIEAT 211
Query: 153 -LPHKL-------------GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL 198
L ++ G+ PDL +YN II+ +G D A + + +G D+
Sbjct: 212 ILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDV 271
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
+++N LL F + R+ D E++ + MV PNV +++ + E + ++A+ ++
Sbjct: 272 VSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEV 331
Query: 259 MRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGD 315
M+ K + PD +++ LI F EG L+ A + K GC + + ++ +C+ G
Sbjct: 332 MKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGC 391
Query: 316 LDFAFNL 322
D A ++
Sbjct: 392 ADLALDV 398
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 122/239 (51%), Gaps = 4/239 (1%)
Query: 124 EQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSAN 183
+ V S+NA++ + + D + +F + + G PD+V+YN +I + +G L+ A
Sbjct: 128 DPDVYSYNAMISGFSKANQIDSANQVFDRMRSR-GFSPDVVTYNIMIGSLCSRGKLELAF 186
Query: 184 TLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
++ E+ K G + +IT+ L+ GR +A ++++ +V+ +RP++ +YNA + G+
Sbjct: 187 EVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGI 246
Query: 244 AIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNK 300
E +AL+ V + ++ NPDV ++ L++ F+N+ E+ +R SGC N
Sbjct: 247 CKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNV 306
Query: 301 AIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+L+ C +G + A N+ + + D ++ KE R++ A E +E
Sbjct: 307 VTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLE 365
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 101/206 (49%), Gaps = 3/206 (1%)
Query: 160 EPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEK 219
+PD+ SYN +I F +DSAN + M +G D++T+N ++ S G+ A +
Sbjct: 128 DPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFE 187
Query: 220 IWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFV 279
+ + ++ +P+V +Y ++ +E + +ALEL E+ S+ + PD++T+ A+I+G
Sbjct: 188 VMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGIC 247
Query: 280 NEGNLEEA---KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQA 336
EG + A R + GC + + +L+ K + L K C +
Sbjct: 248 KEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVV 307
Query: 337 PLQLVVDRLAKELRVEEAKELVELGK 362
+++ +E RV EA ++E+ K
Sbjct: 308 THSILISSFCREGRVREAVNVLEVMK 333
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 88/180 (48%), Gaps = 1/180 (0%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
+E+ ++ +M CE V++ + L+ + + E + + + K G+ PD SY+
Sbjct: 287 WEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEK-GLTPDSYSYD 345
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
+I AF +G LD A L +M G D++ +NT+L G A ++E + +
Sbjct: 346 PLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEV 405
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
P VR+YN L KALE++ EM K I+PD T+ +LI +G ++EA
Sbjct: 406 GCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEA 465
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 7/165 (4%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGA---CVNSKKFDEVDGLFKDLP 154
++A K + A VF+++ C TV ++N + A C N K E + ++
Sbjct: 382 ILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALE---MISEMI 438
Query: 155 HKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRF 214
K GI+PD ++YN++I G +D A LL +ME + +I+FN +LLG R
Sbjct: 439 RK-GIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMCKAHRV 497
Query: 215 ADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
+ ++ TMV PN SY ++G+A +A+EL +
Sbjct: 498 FEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEAMELANSL 542
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 110/252 (43%), Gaps = 3/252 (1%)
Query: 42 DKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFT-ARLIA 100
++ K L N ++ + R R +LE K+ K ++ + ++ LI+
Sbjct: 291 ERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKE-KGLTPDSYSYDPLIS 349
Query: 101 LYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIE 160
+ K + A + ++M C ++++N +L D +F+ L ++G
Sbjct: 350 AFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKL-DEVGCP 408
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
P + +YNT+ A G+ A ++ EM +KGI D IT+N+L+ +G +A +
Sbjct: 409 PTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGL 468
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
M +P V S+N L G+ + + +EL+ M K P+ ++ LI+G
Sbjct: 469 LVDMEATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAY 528
Query: 281 EGNLEEAKRWYN 292
G EA N
Sbjct: 529 AGWRAEAMELAN 540
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 7/146 (4%)
Query: 183 NTLLYEMEK---KGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNAR 239
N LY +E KG + D++ L+ GF+++ A ++ E + P+V SYNA
Sbjct: 79 NESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYG-DPDVYSYNAM 137
Query: 240 LDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGC 296
+ G + Q A ++ MRS+ +PDV T+ +I + G LE A + K GC
Sbjct: 138 ISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDGC 197
Query: 297 GMNKAIFKLLVPFVCEKGDLDFAFNL 322
+ + +L+ +G ++ A L
Sbjct: 198 KPSVITYTILIEATILEGRINEALEL 223
>gi|410109899|gb|AFV61029.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
micrantha]
Length = 431
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 142/299 (47%), Gaps = 14/299 (4%)
Query: 86 YKDISKEGFTARL------IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
Y++I + G+ A L + + K A+ VFD + +V+S+N L+ +
Sbjct: 130 YEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIR 189
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
DE L K G++PD+ +Y+ +I + +D AN L EM KG+ + +
Sbjct: 190 LGDLDEGFRL-KSAMLASGVQPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNGV 248
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
TF TL+ G NGR A +I++ M++ ++ P++ +YN + GL + K+A +L+ EM
Sbjct: 249 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEM 308
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLE---EAKRWYNKSGCGMNKAIFKLLVPFVCEKGDL 316
K + PD FT+ LI G EG+L+ E ++ + ++ + L+ +C++G
Sbjct: 309 SMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRS 368
Query: 317 DFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA----KELVELGKTNSYCRYNL 371
A + + S D ++++ K+ V + KE+ G S YN+
Sbjct: 369 VDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMHRDGHAPSVVTYNV 427
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 86/180 (47%), Gaps = 1/180 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K + A +++ +M ++ ++++N L+ + L ++ K
Sbjct: 253 LIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMK- 311
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD +Y T+I +G LD+A M ++ IRLD + + L+ G GR DA
Sbjct: 312 GLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDA 371
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
EK+ M+++ ++P+ +Y ++ + K +L+ EM P V T+ L+ G
Sbjct: 372 EKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMHRDGHAPSVVTYNVLMNG 431
>gi|302767038|ref|XP_002966939.1| hypothetical protein SELMODRAFT_30641 [Selaginella moellendorffii]
gi|300164930|gb|EFJ31538.1| hypothetical protein SELMODRAFT_30641 [Selaginella moellendorffii]
Length = 506
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 84/374 (22%), Positives = 161/374 (43%), Gaps = 39/374 (10%)
Query: 24 IGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQ 83
+ +RG+ K N+ ++ F+++ + R + Y+ V L AKR + EIL
Sbjct: 114 LNGCLRGLCKAGNVDGALEFFREAKNSFSLRASVSTYSILVAALTAAKRNNDVYEILREM 173
Query: 84 KQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCE------------------- 124
+ + + + +I K+ M + A+ + + M RNC
Sbjct: 174 ESVGLEADKDTYSLIIHSLCKSGMVDKAKVLVERMISRNCVPDARIYDPVIEELSKTGRV 233
Query: 125 ---------------QTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTI 169
+V+++N+L+ + +++ +F + + G PD+ +YN +
Sbjct: 234 DEAVEIAKEADAKHCTSVVTYNSLVLGFLKARRLKRGIKVFTRMA-RTGPSPDIYTYNIL 292
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
+ G A LL M + G+ D +TFN+L+ G + R+ A + + MV+
Sbjct: 293 FEGLSRHGLWRFAYKLLPRMNQDGVLPDAVTFNSLINGLVEDNRYHRAVTLIQEMVSRGC 352
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
PN +Y L LA + + +EL + +++ P+V+T+ ++ G L++A R
Sbjct: 353 DPNAITYTILLKWLARNARADECVELFQRLLDRKLAPNVYTYNTVMSALCKAGRLDQAHR 412
Query: 290 WYN---KSGCGMNKAI-FKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRL 345
+ S C AI ++ L+ +C K +L+ A L C D A +V
Sbjct: 413 LFGVMLASDCTPPNAITYRALIHGLCLKMELERAVLLLDAMAKRDCAPDVACYGTIVAAF 472
Query: 346 AKELRVEEAKELVE 359
K+ R++EA EL+E
Sbjct: 473 CKQGRIDEAFELLE 486
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/211 (19%), Positives = 98/211 (46%), Gaps = 2/211 (0%)
Query: 103 GKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPD 162
+ ++ A K+ M ++FN+L+ V ++ L +++ + G +P+
Sbjct: 297 SRHGLWRFAYKLLPRMNQDGVLPDAVTFNSLINGLVEDNRYHRAVTLIQEMVSR-GCDPN 355
Query: 163 LVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWE 222
++Y ++K D L + + + ++ T+NT++ GR A +++
Sbjct: 356 AITYTILLKWLARNARADECVELFQRLLDRKLAPNVYTYNTVMSALCKAGRLDQAHRLFG 415
Query: 223 TMVNMNVRP-NVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
M+ + P N +Y A + GL ++ + ++A+ L+ M ++ PDV + ++ F +
Sbjct: 416 VMLASDCTPPNAITYRALIHGLCLKMELERAVLLLDAMAKRDCAPDVACYGTIVAAFCKQ 475
Query: 282 GNLEEAKRWYNKSGCGMNKAIFKLLVPFVCE 312
G ++EA + +K +F+ LV +C+
Sbjct: 476 GRIDEAFELLERMPFAGDKVMFRTLVRALCK 506
>gi|242067062|ref|XP_002454820.1| hypothetical protein SORBIDRAFT_04g038070 [Sorghum bicolor]
gi|241934651|gb|EES07796.1| hypothetical protein SORBIDRAFT_04g038070 [Sorghum bicolor]
Length = 600
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 132/282 (46%), Gaps = 9/282 (3%)
Query: 92 EGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFK 151
TA L AL +A M AR+VFDEM + +NA+L C+ + + L
Sbjct: 150 HACTALLTAL-ARARMTATARRVFDEMARAGLAVSTHVYNAMLHVCLKAGDAARAEALVT 208
Query: 152 DLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSN 211
+ G+ D SYNT+I + KG A + M+K+GIR D +T+N+L+ G
Sbjct: 209 RM-DAAGVPLDRFSYNTVIALYCKKGMRYEAMCVRDRMDKEGIRADTVTWNSLIHGLCKY 267
Query: 212 GRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTF 271
GR +A +++ M P+ +Y +DG ++A++L GEM + + P V T+
Sbjct: 268 GRVKEAAQLFTEMAAAQATPDNVTYTTLIDGYCRAGNIEEAVKLRGEMEATGMLPGVATY 327
Query: 272 YALIKGFVNEGNLEEAKRWYNKSG---CGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFS 328
A+++ +G ++E + N+ + L+ C++G + A + K+
Sbjct: 328 NAILRKLCEDGKMKEVNQLLNEMDERKVQADHVTCNTLINAYCKRGHMTSACKVKKKMME 387
Query: 329 ERCLVDQAPLQLVVDRLAKELRVEEAKE----LVELGKTNSY 366
++Q + ++ K ++EAKE +V+ G + +Y
Sbjct: 388 SGLQLNQFTYKALIHGFCKAKELDEAKEAFFQMVDAGFSPNY 429
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 110/240 (45%), Gaps = 10/240 (4%)
Query: 89 ISKEGFTARLIA----LYG--KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKK 142
+ KEG A + ++G K + A ++F EM +++ L+ +
Sbjct: 245 MDKEGIRADTVTWNSLIHGLCKYGRVKEAAQLFTEMAAAQATPDNVTYTTLIDGYCRAGN 304
Query: 143 FDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFN 202
+E L ++ G+ P + +YN I++ + G + N LL EM+++ ++ D +T N
Sbjct: 305 IEEAVKLRGEM-EATGMLPGVATYNAILRKLCEDGKMKEVNQLLNEMDERKVQADHVTCN 363
Query: 203 TLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
TL+ + G A K+ + M+ ++ N +Y A + G K+ +A E +M
Sbjct: 364 TLINAYCKRGHMTSACKVKKKMMESGLQLNQFTYKALIHGFCKAKELDEAKEAFFQMVDA 423
Query: 263 EINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFA 319
+P+ F L+ GF + N + + K G +KA+++ L+ +C KG +D A
Sbjct: 424 GFSPNYSVFSWLVDGFCKKNNADAVLLIPDELMKRGLPPDKAVYRSLIRRLCRKGLVDQA 483
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 108/241 (44%), Gaps = 1/241 (0%)
Query: 53 FRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENAR 112
R +T + + L R + ++ + LI Y +A E A
Sbjct: 250 IRADTVTWNSLIHGLCKYGRVKEAAQLFTEMAAAQATPDNVTYTTLIDGYCRAGNIEEAV 309
Query: 113 KVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKA 172
K+ EM V ++NA+L K EV+ L ++ + ++ D V+ NT+I A
Sbjct: 310 KLRGEMEATGMLPGVATYNAILRKLCEDGKMKEVNQLLNEMDER-KVQADHVTCNTLINA 368
Query: 173 FVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPN 232
+ +G + SA + +M + G++L+ T+ L+ GF +A++ + MV+ PN
Sbjct: 369 YCKRGHMTSACKVKKKMMESGLQLNQFTYKALIHGFCKAKELDEAKEAFFQMVDAGFSPN 428
Query: 233 VRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN 292
++ +DG + L + E+ + + PD + +LI+ +G +++A++ ++
Sbjct: 429 YSVFSWLVDGFCKKNNADAVLLIPDELMKRGLPPDKAVYRSLIRRLCRKGLVDQAQKVFD 488
Query: 293 K 293
+
Sbjct: 489 Q 489
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/258 (20%), Positives = 97/258 (37%), Gaps = 35/258 (13%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I G + N++ V K + + Y +++L + + + ++L +
Sbjct: 294 TLIDGYCRAGNIEEAV-KLRGEMEATGMLPGVATYNAILRKLCEDGKMKEVNQLLNEMDE 352
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
K + LI Y K +A KV +M + ++ AL+ +K+ DE
Sbjct: 353 RKVQADHVTCNTLINAYCKRGHMTSACKVKKKMMESGLQLNQFTYKALIHGFCKAKELDE 412
Query: 146 -----------------------VDGLFKD--------LPHKL---GIEPDLVSYNTIIK 171
VDG K +P +L G+ PD Y ++I+
Sbjct: 413 AKEAFFQMVDAGFSPNYSVFSWLVDGFCKKNNADAVLLIPDELMKRGLPPDKAVYRSLIR 472
Query: 172 AFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRP 231
KG +D A + +M+ KG+ D + + TL + + G+ A + M +
Sbjct: 473 RLCRKGLVDQAQKVFDQMQSKGLVGDSLVYATLAYTYLTEGKPVAASNTLDGMAKNQLYI 532
Query: 232 NVRSYNARLDGLAIEKQT 249
+ YN A EK+T
Sbjct: 533 TPQIYNCLCTSYADEKET 550
>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Cucumis sativus]
Length = 857
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 123/257 (47%), Gaps = 5/257 (1%)
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
+ A + Y + E A +FDEM + +L+FN L+ E + LF +
Sbjct: 184 YCAVISGFYKENCQIE-AYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKV 242
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
K G+ P+L ++N I+ KG++D A LL + +G+ D+I++NTL+ GF + +
Sbjct: 243 -MKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSK 301
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
+AE MVN V PN +YN ++G + A +++ + K PD FT+ +
Sbjct: 302 LVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSS 361
Query: 274 LIKGFVNEGNLEEAKRWYNKS---GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSER 330
LI G N+G++ A + ++ G + ++ LV + ++G + A L K
Sbjct: 362 LINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHG 421
Query: 331 CLVDQAPLQLVVDRLAK 347
C D LVV+ L K
Sbjct: 422 CSPDIWTYNLVVNGLCK 438
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 122/261 (46%), Gaps = 5/261 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+ K + A ++ +M C + ++N ++ + +G+ D K
Sbjct: 397 LVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAK- 455
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G PD+ ++NT+I + + ++D A +L M GI D+IT+NTLL G + +
Sbjct: 456 GCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNV 515
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ M+ PN+ +YN ++ +++ +A+EL EM+++ + PD+ T LI G
Sbjct: 516 VDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICG 575
Query: 278 FVNEGNLEEAKRWY----NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV 333
+ G L++A + + + AIF +++ CEK ++ A L + C
Sbjct: 576 LCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAP 635
Query: 334 DQAPLQLVVDRLAKELRVEEA 354
D ++++D K ++ A
Sbjct: 636 DNYTYRVMIDSYCKTGNIDLA 656
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 145/336 (43%), Gaps = 43/336 (12%)
Query: 18 ATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIE 77
A PK + +VIR Y+ + L L F + F+ Y +++L +F +E
Sbjct: 4 ALQPKHVAAVIR--YQNDPLNAL-KMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAME 60
Query: 78 EIL-EHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGA 136
++L E +K EG ++ YG+ + A VF+ M +CE +V S+NA++
Sbjct: 61 DVLAEMRKNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNI 120
Query: 137 CVNSKKFDEVDGLFKDLPHKLGIEPDL--------------------------------- 163
V F + ++ + +GI PD+
Sbjct: 121 LVEYGYFSQAHKVYMRMK-DIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEF 179
Query: 164 --VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
VSY +I F + A L EM K+GI D++TFN L+ G ++EK++
Sbjct: 180 NAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLF 239
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
++ V PN+ ++N + GL + +A L+ + S+ + PDV ++ LI GF
Sbjct: 240 SKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKH 299
Query: 282 GNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKG 314
L EA+ + +K SG N+ + ++ C+ G
Sbjct: 300 SKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAG 335
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 128/294 (43%), Gaps = 10/294 (3%)
Query: 79 ILEHQKQYKDISKEGFTARLIAL------YGKAAMFENARKVFDEMPGRNCEQTVLSFNA 132
I E + + I EG T +I+ + K + A +M E ++N
Sbjct: 267 IDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNT 326
Query: 133 LLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKK 192
++ + D + +D K G PD +Y+++I + G ++ A + YE +K
Sbjct: 327 IINGFCKAGMMQNADKILRDAMFK-GFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEK 385
Query: 193 GIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKA 252
G + +I +NTL+ G G A ++ + M+ P++ +YN ++GL A
Sbjct: 386 GFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDA 445
Query: 253 LELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPF 309
++ + +K PD+FTF LI G+ + N+++A + G + + L+
Sbjct: 446 NGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNG 505
Query: 310 VCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKT 363
+C+ LD + K + C + ++++ K+ +V EA EL + KT
Sbjct: 506 LCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKT 559
>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16640, mitochondrial; Flags: Precursor
gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 110/219 (50%), Gaps = 4/219 (1%)
Query: 110 NARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTI 169
+A +FD+M G + V+ +N ++ SK+ D L + K GI PD+V+YN++
Sbjct: 169 DALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRM-EKDGIGPDVVTYNSL 227
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
I G A ++ M K+ I D+ TFN L+ GR ++AE+ +E M+ ++
Sbjct: 228 ISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSL 287
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
P++ +Y+ + GL + + +A E+ G M SK PDV T+ LI G+ +E +
Sbjct: 288 DPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMK 347
Query: 290 WY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKR 325
+ ++ G N + +L+ C G L+ A + +R
Sbjct: 348 LFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRR 386
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 106/203 (52%), Gaps = 6/203 (2%)
Query: 124 EQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSA 182
E ++++F +LL G C + +D + D +G +P++V YNTII +D+A
Sbjct: 148 EPSIVTFGSLLNGFCRGDRVYDAL--YMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNA 205
Query: 183 NTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDG 242
LL MEK GI D++T+N+L+ G S+GR++DA ++ M + P+V ++NA +D
Sbjct: 206 LDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDA 265
Query: 243 LAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMN 299
E + +A E EM + ++PD+ T+ LI G L+EA+ + GC +
Sbjct: 266 CVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPD 325
Query: 300 KAIFKLLVPFVCEKGDLDFAFNL 322
+ +L+ C+ ++ L
Sbjct: 326 VVTYSILINGYCKSKKVEHGMKL 348
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 117/270 (43%), Gaps = 39/270 (14%)
Query: 126 TVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTL 185
++ F+ LL A KK+D V L++ + LGI +L + N ++ F L A +
Sbjct: 80 SIADFSRLLSAISKMKKYDVVIYLWEQM-QMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 186 LYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAI 245
L +M K G ++TF +LL GF R DA +++ MV M +PNV YN +DGL
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198
Query: 246 EKQTKKALEL-----------------------------------VGEMRSKEINPDVFT 270
KQ AL+L V M +EI PDVFT
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258
Query: 271 FYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTF 327
F ALI V EG + EA+ +Y + + + LL+ +C LD A +
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV 318
Query: 328 SERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
S+ C D ++++ K +VE +L
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKL 348
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 132/273 (48%), Gaps = 6/273 (2%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I G+ K + +D + G + Y + L ++ R+ ++ +
Sbjct: 191 TIIDGLCKSKQVDNALDLLNRMEKDG-IGPDVVTYNSLISGLCSSGRWSDATRMVSCMTK 249
Query: 86 YKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKF 143
++I + FT LI K A + ++EM R+ + +++++ L+ G C+ S+
Sbjct: 250 -REIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSR-L 307
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT 203
DE + +F + K G PD+V+Y+ +I + ++ L EM ++G+ + +T+
Sbjct: 308 DEAEEMFGFMVSK-GCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTI 366
Query: 204 LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
L+ G+ G+ AE+I+ MV V PN+ +YN L GL + +KAL ++ +M+
Sbjct: 367 LIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNG 426
Query: 264 INPDVFTFYALIKGFVNEGNLEEAKRWYNKSGC 296
++ D+ T+ +I+G G + +A Y C
Sbjct: 427 MDADIVTYNIIIRGMCKAGEVADAWDIYCSLNC 459
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 88/170 (51%), Gaps = 1/170 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI Y K+ E+ K+F EM R + +++ L+ + K + + +F+ +
Sbjct: 332 LINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVF-C 390
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ P++++YN ++ D G ++ A +L +M+K G+ D++T+N ++ G G ADA
Sbjct: 391 GVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADA 450
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPD 267
I+ ++ + P++ +Y + GL + ++A L +M+ I P+
Sbjct: 451 WDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 88/186 (47%), Gaps = 1/186 (0%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
+ A ++F M + C V++++ L+ SKK + LF ++ + G+ + V+Y
Sbjct: 307 LDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQR-GVVRNTVTYT 365
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
+I+ + G L+ A + M G+ ++IT+N LL G NG+ A I M
Sbjct: 366 ILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKN 425
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+ ++ +YN + G+ + A ++ + + + PD++T+ ++ G +G EA
Sbjct: 426 GMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREA 485
Query: 288 KRWYNK 293
+ K
Sbjct: 486 DALFRK 491
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 38/184 (20%), Positives = 73/184 (39%), Gaps = 3/184 (1%)
Query: 179 LDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNA 238
LD + L + M + + F+ LL ++ +WE M + + N+ + N
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 239 RLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SG 295
L+ Q AL +G+M P + TF +L+ GF + +A +++ G
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 296 CGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAK 355
N I+ ++ +C+ +D A +L R + D ++ L R +A
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 356 ELVE 359
+V
Sbjct: 242 RMVS 245
>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
Length = 701
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 133/270 (49%), Gaps = 4/270 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI K+ +A ++FDEM R V+ +N L+ + F + + ++K L +
Sbjct: 190 LINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTES 249
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
+ P + +YN +I G LD + + M+K DL TF++++ G G F A
Sbjct: 250 SVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAA 309
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
EK+++ M+ + P+VR+YNA L GL + K EL M SK ++ ++ LI+G
Sbjct: 310 EKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVM-SKNNCCNIVSYNMLIQG 368
Query: 278 FVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
++ +E+A ++ ++ G + + LL+ +C+ G L+ A + + +E +D
Sbjct: 369 LLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLD 428
Query: 335 QAPLQLVVDRLAKELRVEEAKELVELGKTN 364
+V L K+ +E+A EL+ K N
Sbjct: 429 TFAYSSMVHGLCKKGMLEQAVELIHQMKKN 458
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 130/298 (43%), Gaps = 39/298 (13%)
Query: 25 GSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRF-RWIEEILEHQ 83
G +I G+ K L + + +++ + G +T Y+ V L + +E I + +
Sbjct: 398 GLLINGLCKNGYLNKALRILEEAENEGA-DLDTFAYSSMVHGLCKKGMLEQAVELIHQMK 456
Query: 84 KQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKF 143
K + ++ F + LI Y +A E A V EM ++C TV+S+N ++ +++F
Sbjct: 457 KNRRKLNSHVFNS-LINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERF 515
Query: 144 DEVDGLFKDLPHKLGIEPDLVSY-----------------------------------NT 168
+ K++ + G++PD+++Y N
Sbjct: 516 SDAYLSLKEMLEE-GLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNI 574
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
II +D A + +M + DL+T NT++ G Y G +A KIW+ ++
Sbjct: 575 IIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAG 634
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEE 286
++P++ SYN GL + A+E + + + I P+ T+ L++ V++ L E
Sbjct: 635 LQPDIISYNITFKGLCSCARVSDAIEFLYDALDRGILPNAPTWNVLVRAVVDDKPLME 692
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 103/213 (48%), Gaps = 2/213 (0%)
Query: 81 EHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNS 140
E + + D+ +++ + L K M E A ++ +M + FN+L+ V +
Sbjct: 419 EAENEGADLDTFAYSSMVHGL-CKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRA 477
Query: 141 KKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLIT 200
K +E + +++ K P +VSYNTII A L EM ++G++ D+IT
Sbjct: 478 FKLEEAISVLREMKSK-DCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMIT 536
Query: 201 FNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMR 260
++ L+ G + A +W +N ++P+++ +N + GL ++ ALE+ +MR
Sbjct: 537 YSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMR 596
Query: 261 SKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK 293
PD+ T +++G G+ EA + +++
Sbjct: 597 QVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDR 629
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 118/272 (43%), Gaps = 6/272 (2%)
Query: 90 SKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDG 148
S + FT + +I KA F A KVF EM V ++NA+L + K ++
Sbjct: 287 SPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFE 346
Query: 149 LFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
L+ + ++VSYN +I+ +D ++ A + ++G++ D T+ L+ G
Sbjct: 347 LWNVMSKNNCC--NIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGL 404
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDV 268
NG A +I E N + +Y++ + GL + ++A+EL+ +M+ +
Sbjct: 405 CKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNS 464
Query: 269 FTFYALIKGFVNEGNLEEA---KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKR 325
F +LI G+V LEEA R C + ++ +C+ A+ K
Sbjct: 465 HVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKE 524
Query: 326 TFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
E D L++D L + +V+ A L
Sbjct: 525 MLEEGLKPDMITYSLLIDGLCRGEKVDMALNL 556
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 87/186 (46%), Gaps = 4/186 (2%)
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT 203
D+ LF+++ G P + S+N+++ AF++ A + G+ +L T+N
Sbjct: 95 DQALNLFQNMVDIFGCNPGIRSFNSMLNAFIESNQWREAELFFTYFQTAGMSPNLQTYNI 154
Query: 204 LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
L+ +F + + M + P++ SY ++ LA A+EL EM +
Sbjct: 155 LIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSGNLLDAVELFDEMSVRG 214
Query: 264 INPDVFTFYALIKGFVNEGNLEEA----KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFA 319
+NPDV + LI GF+ +G+ +A KR +S + + +++ +C+ G LD +
Sbjct: 215 VNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDES 274
Query: 320 FNLCKR 325
+ R
Sbjct: 275 MEMWNR 280
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 101/226 (44%), Gaps = 13/226 (5%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G + D +Y++++ KG L+ A L+++M+K +L+ FN+L+ G+ + +A
Sbjct: 424 GADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEA 483
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ M + + P V SYN ++GL ++ A + EM + + PD+ T+ LI G
Sbjct: 484 ISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDG 543
Query: 278 FVNEGNLEEAKRWYNKSGCGMNK------AIFKLLVPFVCEKGDLDFAFNLCKRTFSERC 331
++ A +++ +NK + +++ +C +D A + + C
Sbjct: 544 LCRGEKVDMALNLWHQC---INKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNC 600
Query: 332 LVDQAPLQLVVDRLAKELRVEEA----KELVELGKTNSYCRYNLKF 373
+ D +++ L K EA ++E G YN+ F
Sbjct: 601 VPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITF 646
>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 859
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 122/252 (48%), Gaps = 11/252 (4%)
Query: 81 EHQKQYKDISKEGFTARLIALYG------KAAMFENARKVFDEMPGRNCEQTVLSFNALL 134
E K ++ ++ +G ++ K ++A ++F M + ++S++ LL
Sbjct: 352 ESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILL 411
Query: 135 GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGI 194
+F +++ LF + K GI + +N +I A +G +D A + EM+ +G+
Sbjct: 412 HGYATEGRFADMNNLFHSMADK-GIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGV 470
Query: 195 RLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALE 254
R D++T++TL+ F GR ADA + + M+++ + PN Y++ + G + KA E
Sbjct: 471 RPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKE 530
Query: 255 LVGEMRSKEI-NPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFV 310
LV EM SK I P++ F ++I NEG + +A +N G F L+
Sbjct: 531 LVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGY 590
Query: 311 CEKGDLDFAFNL 322
C G ++ AF +
Sbjct: 591 CLVGKMEKAFGV 602
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 102/204 (50%), Gaps = 4/204 (1%)
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL 179
G C V+SFN ++ + + L ++ K G+EPD+V+YN+I+ A ++
Sbjct: 257 GGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQK-GVEPDVVTYNSIVDALCKARAM 315
Query: 180 DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNAR 239
D A +L +M KG+ D +T+ ++ G+ +G + ++ K++ M + + P + ++N+
Sbjct: 316 DKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSF 375
Query: 240 LDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGC 296
+ L ++K A E+ M +K PD+ ++ L+ G+ EG + ++ G
Sbjct: 376 MSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGI 435
Query: 297 GMNKAIFKLLVPFVCEKGDLDFAF 320
N F +L+ ++G +D A
Sbjct: 436 VANCHCFNILISAHAKRGMMDEAM 459
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 129/294 (43%), Gaps = 4/294 (1%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
S+I G +L + + + G R N ++ + L N R ++
Sbjct: 514 SLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIH 573
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
D LI Y E A V D M E V+++N L+ S K D+
Sbjct: 574 IGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDD 633
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
LF+++ HK ++P V+Y+ ++ G +A + +EM G +D+ T+ LL
Sbjct: 634 GLILFREMLHK-KVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILL 692
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEIN 265
G N +A ++ + M+ + ++ N ++ L ++ ++A +L + + +
Sbjct: 693 KGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGLV 752
Query: 266 PDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDL 316
P+V T+ +I + EG++EEA ++ KSGC + + ++ + +KGD+
Sbjct: 753 PNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDI 806
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 88/166 (53%), Gaps = 4/166 (2%)
Query: 131 NALLGACVNSKKFDE-VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEM 189
N L ++K+ DE VD L + LG P+ +SYNT+IK+ A ++ M
Sbjct: 195 NTFLKCLCHAKRTDEAVDVLLHRMS-DLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRM 253
Query: 190 EKKGIRL--DLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEK 247
K+G R D+++FNT++ GF+ G + A + MV V P+V +YN+ +D L +
Sbjct: 254 AKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKAR 313
Query: 248 QTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK 293
KA ++ +M K + PD T+ A+I G+ G+ +E+ + + K
Sbjct: 314 AMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRK 359
>gi|410109953|gb|AFV61056.1| pentatricopeptide repeat-containing protein 11, partial [Nashia
inaguensis]
Length = 431
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 141/299 (47%), Gaps = 14/299 (4%)
Query: 86 YKDISKEGFTARL------IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
Y++I + G+ A L + + K A+ VFD + +V+S+N L+ +
Sbjct: 130 YEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIR 189
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
DE L K G++PD+ +Y+ +I + +D AN L EM KG+ + +
Sbjct: 190 LGDLDEGFRL-KSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGV 248
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
TF TL+ G NGR A +I++ M++ ++ P++ +YN + GL + K+A L+ EM
Sbjct: 249 TFTTLIXGHCKNGRVDLAMEIYKXMLSQSLLPDLITYNTLIYGLCKKGDLKQAHXLIDEM 308
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCG---MNKAIFKLLVPFVCEKGDL 316
K + PD FT+ LI G EG+L+ A + + G ++ + L+ +C++G
Sbjct: 309 SMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQGNIRLDDVAYTALISGLCQEGRS 368
Query: 317 DFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA----KELVELGKTNSYCRYNL 371
A + + S D ++++ K+ V + KE+ G S YN+
Sbjct: 369 VDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPSVVTYNV 427
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 86/180 (47%), Gaps = 1/180 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K + A +++ M ++ ++++N L+ + L ++ K
Sbjct: 253 LIXGHCKNGRVDLAMEIYKXMLSQSLLPDLITYNTLIYGLCKKGDLKQAHXLIDEMSMK- 311
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD +Y T+I +G LD+A M + IRLD + + L+ G GR DA
Sbjct: 312 GLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQGNIRLDDVAYTALISGLCQEGRSVDA 371
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
EK+ M+++ ++P++ +Y ++ + K +L+ EM+ P V T+ L+ G
Sbjct: 372 EKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPSVVTYNVLMNG 431
>gi|410109877|gb|AFV61018.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
lycioides]
Length = 397
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 121/243 (49%), Gaps = 23/243 (9%)
Query: 66 RLANAKRFRWI-----EEILEHQKQ----------YKDISKEGFTARL------IALYGK 104
RL +F W+ ++LEH + Y++I + G+ A L + + K
Sbjct: 79 RLTREHKF-WVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCK 137
Query: 105 AAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLV 164
A+ VF+ + +V+SFN L+ + DE L K+ H G++PD+
Sbjct: 138 EGDIMVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDMDEGFRL-KNAMHASGVQPDVY 196
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
+Y+ +I + +D AN + EM KG+ + +TF TL+ G NGR A +I++ M
Sbjct: 197 TYSVLINGLCKESKMDDANEMFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 256
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
++ ++ P++ +YN + GL + K+A +L+ EM K + PD T+ LI G EG+L
Sbjct: 257 LSQSLXPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDL 316
Query: 285 EEA 287
E A
Sbjct: 317 ETA 319
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 118/256 (46%), Gaps = 39/256 (15%)
Query: 141 KKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLIT 200
K F V G ++++ + G L +N ++ F +G + A ++ + K G+R +++
Sbjct: 104 KYFKLVWGFYEEIL-ECGYPASLYFFNILMHRFCKEGDIMVAQSVFNAITKWGLRPSVVS 162
Query: 201 FNTLLLGF---------------------------YS---NG-----RFADAEKIWETMV 225
FNTL+ G+ YS NG + DA ++++ M+
Sbjct: 163 FNTLMNGYIRLGDMDEGFRLKNAMHASGVQPDVYTYSVLINGLCKESKMDDANEMFDEML 222
Query: 226 NMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLE 285
+ + PN ++ +DG + A+E+ +M S+ + PD+ T+ LI G +G+L+
Sbjct: 223 DKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLXPDLITYNTLIYGLCKKGDLK 282
Query: 286 EAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVV 342
+A ++ G +K + L+ C++GDL+ AF KR E +D ++
Sbjct: 283 QAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQEXIRLDDVAYTALI 342
Query: 343 DRLAKELRVEEAKELV 358
L +E R +A++++
Sbjct: 343 SGLCQEERYLDAEKVL 358
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 80/163 (49%), Gaps = 1/163 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K + A +++ +M ++ ++++N L+ + L ++ K
Sbjct: 236 LIDGHCKNGRVDLAMEIYKQMLSQSLXPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMK- 294
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD ++Y T+I +G L++A M ++ IRLD + + L+ G R+ DA
Sbjct: 295 GLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQEXIRLDDVAYTALISGLCQEERYLDA 354
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMR 260
EK+ M+++ ++P+ +Y ++ + +L+ EM+
Sbjct: 355 EKVLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQ 397
>gi|255660940|gb|ACU25639.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 484
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 129/285 (45%), Gaps = 34/285 (11%)
Query: 73 FRWIEE--ILEHQKQYK---------------------DISKEGFT------ARLIALYG 103
FRW+E + EH ++ D+ K+G +I YG
Sbjct: 32 FRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDLWVLMIDSYG 91
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
KA + + + K+F +M E+T+ S++AL + ++ F + + GIEP
Sbjct: 92 KAGIVQESVKMFQKMEELGVERTIKSYDALFKVILRRGRYMMAKRYFNKMLSE-GIEPTR 150
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
++N ++ F G +++AN +M+ + I D++T+NT++ G+ + +AEK +
Sbjct: 151 HTFNVMMWGFFLSGKVETANRFFEDMKSREIMPDVVTYNTMVNGYCRVKKMEEAEKYFVE 210
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M N+ P V +Y + G + AL V EM+ + P+ T+ L+ G N
Sbjct: 211 MKGRNIEPTVVTYTTLIKGYVSVDRVDDALRFVEEMKGFGMKPNAITYSTLLPGLCNAEK 270
Query: 284 LEEA----KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCK 324
+ EA K +K + +IF L+ C+ GDLD A N+ K
Sbjct: 271 MSEARSILKEMVDKYIAPTDNSIFMRLISGQCKAGDLDAAANVLK 315
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 113/243 (46%), Gaps = 22/243 (9%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A++ F++M E T +FN ++ S K + + F+D+ + I PD+V+YNT++
Sbjct: 134 AKRYFNKMLSEGIEPTRHTFNVMMWGFFLSGKVETANRFFEDMKSR-EIMPDVVTYNTMV 192
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
+ ++ A EM+ + I ++T+ TL+ G+ S R DA + E M ++
Sbjct: 193 NGYCRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDRVDDALRFVEEMKGFGMK 252
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINP-DVFTFYALIKGFVNEGNLEEAKR 289
PN +Y+ L GL ++ +A ++ EM K I P D F LI G G+L+ A
Sbjct: 253 PNAITYSTLLPGLCNAEKMSEARSILKEMVDKYIAPTDNSIFMRLISGQCKAGDLDAA-- 310
Query: 290 WYNKSGCGMNKAIFKLLVPF-----------VCEKGDLDFAFNLCKRTFSERCLV-DQAP 337
+ KA+ +L VP C+ G+ D A L + + ++ Q+
Sbjct: 311 ------ANVLKAMIRLSVPTEAGHYGVLIENYCKAGEYDKAIKLLDKVIEKDIILRPQST 364
Query: 338 LQL 340
L +
Sbjct: 365 LHM 367
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 114/266 (42%), Gaps = 14/266 (5%)
Query: 102 YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEP 161
Y + E A K F EM GRN E TV+++ L+ V+ + D+ +++ G++P
Sbjct: 195 YCRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDRVDDALRFVEEM-KGFGMKP 253
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIR-LDLITFNTLLLGFYSNGRFADAEKI 220
+ ++Y+T++ + + A ++L EM K I D F L+ G G A +
Sbjct: 254 NAITYSTLLPGLCNAEKMSEARSILKEMVDKYIAPTDNSIFMRLISGQCKAGDLDAAANV 313
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI--------NPDVFTFY 272
+ M+ ++V Y ++ + KA++L+ ++ K+I + + +
Sbjct: 314 LKAMIRLSVPTEAGHYGVLIENYCKAGEYDKAIKLLDKVIEKDIILRPQSTLHMESSAYN 373
Query: 273 ALIKGFVNEGNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSE 329
LI+ N G +A+ R K G + L+ ++G D AF L K
Sbjct: 374 PLIEYLCNNGQTAKAEALVRQLMKLGV-QDPTALNTLIRGHSQEGSPDSAFELLKIMLRR 432
Query: 330 RCLVDQAPLQLVVDRLAKELRVEEAK 355
+ +Q+ +V K+ +AK
Sbjct: 433 KVDSEQSAYDSLVQSYLKKNEPADAK 458
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 93/215 (43%), Gaps = 17/215 (7%)
Query: 37 LKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTA 96
LK +VDK+ +D I+ + A +L+ + ++ G
Sbjct: 278 LKEMVDKYIAPTD-------NSIFMRLISGQCKAGDLDAAANVLKAMIRLSVPTEAGHYG 330
Query: 97 RLIALYGKAAMFENARKVFDEM--------PGRNCEQTVLSFNALLGACVNSKKFDEVDG 148
LI Y KA ++ A K+ D++ P ++N L+ N+ + + +
Sbjct: 331 VLIENYCKAGEYDKAIKLLDKVIEKDIILRPQSTLHMESSAYNPLIEYLCNNGQTAKAEA 390
Query: 149 LFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
L + L KLG++ D + NT+I+ +GS DSA LL M ++ + + +++L+ +
Sbjct: 391 LVRQL-MKLGVQ-DPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEQSAYDSLVQSY 448
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
ADA+ ++M+ P+ + + ++ L
Sbjct: 449 LKKNEPADAKAALDSMIENGHLPDSSLFRSVMESL 483
>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
Length = 667
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 147/297 (49%), Gaps = 5/297 (1%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I + ++ + + FK+ G +++ Y V L A ++ ++L+
Sbjct: 210 TIIDSLCRDGCIDAAISLFKEMETKG-IKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTS 268
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
K I LI ++ K + A +++ EM + +++N+L+ + E
Sbjct: 269 RKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSE 328
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
+ + DL + PD+V++ ++IK + +D L ++ K+G+ + +T++ L+
Sbjct: 329 ANNML-DLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILV 387
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEIN 265
GF +G+ AE++++ MV++ V P+V +Y LDGL + +KALE+ +++ ++N
Sbjct: 388 QGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMN 447
Query: 266 PDVFTFYALIKGFVNEGNLEEAKRWYNKSGC-GM--NKAIFKLLVPFVCEKGDLDFA 319
D+ + +I+G G +E+A + C G+ N + +++ +C+KG L A
Sbjct: 448 LDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEA 504
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 128/280 (45%), Gaps = 39/280 (13%)
Query: 118 MPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKG 177
M C+ V+++N+++ S L + + + ++ D+ +Y+TII + G
Sbjct: 161 MVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDER-NVKADVFTYSTIIDSLCRDG 219
Query: 178 SLDSANTLLYEMEKKGIRLDLITFNTLLLG------------------------------ 207
+D+A +L EME KGI+ L+T+N+L+ G
Sbjct: 220 CIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFN 279
Query: 208 -----FYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
F G+ +A ++++ M+ + PN +YN+ +DG ++ + +A ++ M
Sbjct: 280 VLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRN 339
Query: 263 EINPDVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFA 319
+PD+ TF +LIKG+ ++E + + +K G N + +LV C+ G L+ A
Sbjct: 340 NCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIA 399
Query: 320 FNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
L + S L D +++D L ++E+A E+ E
Sbjct: 400 EELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFE 439
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 118/252 (46%), Gaps = 4/252 (1%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
++A +F EM +++ F+ ++K+F+ V K + GI ++ + N
Sbjct: 47 DDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELN-GIAHNIYTLNI 105
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
+I F A ++L ++ K G D TFNTL+ G + ++A + MV
Sbjct: 106 MINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENG 165
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
+PNV +YN+ ++G+ T AL+L+ +M + + DVFT+ +I +G ++ A
Sbjct: 166 CQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAI 225
Query: 289 RWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRL 345
+ + G + + LV +C+ G + L K S + + + +++D
Sbjct: 226 SLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVF 285
Query: 346 AKELRVEEAKEL 357
KE +++EA EL
Sbjct: 286 VKEGKLQEANEL 297
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 100/205 (48%), Gaps = 3/205 (1%)
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
FT+ LI Y K + K+F ++ R ++++ L+ S K + + LF+++
Sbjct: 348 FTS-LIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEM 406
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
LG+ PD+++Y ++ D G L+ A + +++K + LD++ + ++ G G+
Sbjct: 407 V-SLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGK 465
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
DA ++ ++ V+PNV +Y + GL + +A L+ +M P+ T+
Sbjct: 466 VEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNT 525
Query: 274 LIKGFVNEGNL-EEAKRWYNKSGCG 297
LI+ + +G+L AK CG
Sbjct: 526 LIRAHLRDGDLTASAKLIEEMKSCG 550
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 97/222 (43%), Gaps = 8/222 (3%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
S+I+G K + + F+K S G NT Y+ VQ + + EE+ +
Sbjct: 350 SLIKGYCKVKRVDEGMKLFRKISKRG-LVANTVTYSILVQGFCQSGKLEIAEELFQEMVS 408
Query: 86 Y---KDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKK 142
D+ G + GK E A ++F+++ ++ + ++ K
Sbjct: 409 LGVLPDVMTYGILLDGLCDNGK---LEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGK 465
Query: 143 FDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFN 202
++ LF LP K G++P++++Y +I KGSL AN LL +ME+ G + T+N
Sbjct: 466 VEDAWNLFCSLPCK-GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYN 524
Query: 203 TLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLA 244
TL+ +G + K+ E M + + S +D L+
Sbjct: 525 TLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLS 566
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 95/211 (45%), Gaps = 7/211 (3%)
Query: 71 KRFRWIEEILEHQKQYKDISKEGFTAR------LIALYGKAAMFENARKVFDEMPGRNCE 124
K + ++ + E K ++ ISK G A L+ + ++ E A ++F EM
Sbjct: 353 KGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVL 412
Query: 125 QTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANT 184
V+++ LL ++ K ++ +F+DL K + D+V Y II+ G ++ A
Sbjct: 413 PDVMTYGILLDGLCDNGKLEKALEIFEDL-QKSKMNLDIVMYTIIIEGMCKGGKVEDAWN 471
Query: 185 LLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLA 244
L + KG++ +++T+ ++ G G ++A + M PN +YN +
Sbjct: 472 LFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHL 531
Query: 245 IEKQTKKALELVGEMRSKEINPDVFTFYALI 275
+ + +L+ EM+S + D + +I
Sbjct: 532 RDGDLTASAKLIEEMKSCGFSADASSIKMVI 562
>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 624
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 129/295 (43%), Gaps = 47/295 (15%)
Query: 113 KVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPH---------KLGIEPDL 163
++ ++P CE ++S+NA+L +K++ +V+ L ++ + G PD+
Sbjct: 207 EMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDI 266
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
Y TII +G + AN +L M G++ +++ +NT+L G S R+ AE++
Sbjct: 267 RMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTE 326
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M N + ++N +D + +EL+ +M PDV T+ +I GF EG
Sbjct: 327 MYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGL 386
Query: 284 LEEA-----------------------------KRWYN---------KSGCGMNKAIFKL 305
++EA +RW + + GC N F
Sbjct: 387 IDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNT 446
Query: 306 LVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVEL 360
++ F+C+KG ++ A L K+ C D V+D L K + EEA EL+ +
Sbjct: 447 IINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNV 501
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 123/266 (46%), Gaps = 16/266 (6%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
+A V DEM R+C ++ ++ + S + + + L H G D + N
Sbjct: 132 IADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSALRVLEAL-HAKGSTLDTGNCN 190
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
+I A D+G +D +L ++ G D++++N +L G + R+ D E++ + MV +
Sbjct: 191 LVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKV 250
Query: 228 N----------VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ P++R Y +DG+ E + A E++ M S + P+V + ++KG
Sbjct: 251 HEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKG 310
Query: 278 FVNEGNLEEAK----RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV 333
+ E+A+ Y K+ C ++ F +LV F C+ G +D L ++ C+
Sbjct: 311 ICSADRWEKAEELLTEMYQKN-CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMP 369
Query: 334 DQAPLQLVVDRLAKELRVEEAKELVE 359
D V++ KE ++EA L++
Sbjct: 370 DVITYTTVINGFCKEGLIDEAVMLLK 395
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 130/289 (44%), Gaps = 39/289 (13%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
+E A ++ EM +NC ++FN L+ + D V L + + G PD+++Y
Sbjct: 317 WEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEH-GCMPDVITYT 375
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
T+I F +G +D A LL M G + + I++ +L G S R+ DAE++ M+
Sbjct: 376 TVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQ 435
Query: 228 NVRPN-----------------------------------VRSYNARLDGLAIEKQTKKA 252
PN + SY+ +DGL +T++A
Sbjct: 436 GCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEA 495
Query: 253 LELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPF 309
LEL+ M +K I P+V T+ ++ EG +++ + ++ + + ++ ++
Sbjct: 496 LELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISS 555
Query: 310 VCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
+C++ + D A + S C+ +++ ++ LA E + EA++L+
Sbjct: 556 LCKRRETDLAIDFLAYMVSNGCMPNESTYTALIKGLASEGLLCEAQDLL 604
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 104/237 (43%), Gaps = 2/237 (0%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
+VI G KE + V K G + NT YT ++ L + +R+ EE++ Q
Sbjct: 376 TVINGFCKEGLIDEAVMLLKNMPSCG-CKPNTISYTIVLKGLCSTERWVDAEELMSRMIQ 434
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
+ +I K + E A ++ +M C ++S++ ++ + K +E
Sbjct: 435 QGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEE 494
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
L + +K GI P++++Y+++ A +G +D + ++ IR D + +N ++
Sbjct: 495 ALELLNVMINK-GITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVI 553
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
A MV+ PN +Y A + GLA E +A +L+ E+ S+
Sbjct: 554 SSLCKRRETDLAIDFLAYMVSNGCMPNESTYTALIKGLASEGLLCEAQDLLSELCSR 610
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/161 (18%), Positives = 66/161 (40%), Gaps = 9/161 (5%)
Query: 201 FNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMR 260
+ L+ GR ADA + + N V YNA + G Q + A L +
Sbjct: 55 LSALIRSLCVAGRTADAVRALDAAGNAA---GVVDYNAMVAGYCRVGQVEAARRLAAAV- 110
Query: 261 SKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLD 317
+ P+ +T++ +++G G + +A ++ C ++ +++ C G
Sbjct: 111 --PVPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYS 168
Query: 318 FAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
A + + ++ +D LV++ + + V+E E++
Sbjct: 169 SALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEML 209
>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
Length = 948
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 123/278 (44%), Gaps = 39/278 (14%)
Query: 118 MPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKG 177
M GR E V+ FN ++G C+ K E L++ + K G +PD +Y+ ++ G
Sbjct: 302 MLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLK-GCQPDAHTYSILMHGLCKLG 360
Query: 178 SLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYN 237
+ SA LL EMEKKG +++T+ +L F NG + D + E M + N + YN
Sbjct: 361 RISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYN 420
Query: 238 ARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK--------- 288
+ L + + +A+ L+ EMRS+ NPD+ ++ +I N +EEA+
Sbjct: 421 GMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEE 480
Query: 289 --------------------RWYNK---------SGCGMNKAIFKLLVPFVCEKGDLDFA 319
RW + GC ++ + L+ +C+ G++D +
Sbjct: 481 GVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRS 540
Query: 320 FNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
L + + + +++ L KE RV +A EL
Sbjct: 541 LVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALEL 578
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 133/282 (47%), Gaps = 12/282 (4%)
Query: 87 KDISKEGFTARLIAL------YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNS 140
+++ K+GF ++ + K M+++ R + +EM + +N ++ A
Sbjct: 370 REMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKD 429
Query: 141 KKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLIT 200
+ DE GL +++ + G PD+ SYNTII + ++ A + + ++G+ + IT
Sbjct: 430 GRMDEAMGLIQEMRSQ-GCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGIT 488
Query: 201 FNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMR 260
+NT++ +GR+ DA ++ + M+ +V SYN + + + ++L L+ EM
Sbjct: 489 YNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMA 548
Query: 261 SKEINPDVFTFYALIKGFVNE----GNLEEAKRWYNKSGCGMNKAIFKLLVPFVCEKGDL 316
K I P+ ++ LI E LE +K+ N+ G + + L+ +C+ G +
Sbjct: 549 EKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQ-GLAPDIVTYNTLINGLCKMGWM 607
Query: 317 DFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
A NL ++ +E D +++ K +++A L+
Sbjct: 608 HAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLL 649
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 112/240 (46%), Gaps = 35/240 (14%)
Query: 89 ISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDG 148
++ +G+ + AL M E A + EM + C + S+N ++ N+++ +E +
Sbjct: 414 LNSQGYNGMIYALCKDGRMDE-AMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEH 472
Query: 149 LFKDL---------------PHKL-------------------GIEPDLVSYNTIIKAFV 174
+F++L H L G D+VSYN +IKA
Sbjct: 473 MFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMC 532
Query: 175 DKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVR 234
G++D + LL EM +KGI+ + +++N L+ R DA ++ + M+N + P++
Sbjct: 533 KDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIV 592
Query: 235 SYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS 294
+YN ++GL AL L+ ++ ++ ++PD+ T+ LI L++A N++
Sbjct: 593 TYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRA 652
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 105/229 (45%), Gaps = 9/229 (3%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRN-CEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHK 156
++++ +A +A ++ M R+ T +F A + +E L + + +
Sbjct: 145 VLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRANEALALLRGMA-R 203
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
G PD V Y T+I A D+G + A TLL EM G D+ TF+ ++ G GR +
Sbjct: 204 HGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVRE 263
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
A ++ + M+ P V +Y L GL +Q +A ++G R E+N V F +I
Sbjct: 264 AARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLG--RVPELN--VVLFNTVIG 319
Query: 277 GFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
G + EG L EA Y GC + + +L+ +C+ G + A L
Sbjct: 320 GCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRL 368
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/246 (19%), Positives = 91/246 (36%), Gaps = 37/246 (15%)
Query: 149 LFKDLPHKLGIEPDLVSYNTII------------------------------------KA 172
L LP + G++P SYN ++ +A
Sbjct: 125 LLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARA 184
Query: 173 FVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPN 232
G + A LL M + G D + + T++ G +A + M+ M +
Sbjct: 185 LCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAAD 244
Query: 233 VRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN 292
V +++ + G+ + ++A LV M +K P V T+ L++G +EA+
Sbjct: 245 VNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLG 304
Query: 293 KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVE 352
+ +N +F ++ +G L A L + + C D +++ L K R+
Sbjct: 305 RVP-ELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIS 363
Query: 353 EAKELV 358
A L+
Sbjct: 364 SAVRLL 369
>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680 [Vitis vinifera]
gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 122/252 (48%), Gaps = 4/252 (1%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A+ +F E+ R TV+SFN L+ S D+ L K + + PD+ +Y+ +I
Sbjct: 244 AQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRL-KRFMMENRVFPDVFTYSVLI 302
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
+G LD AN L EM +G+ + +TF TL+ G GR +I++ M+ V+
Sbjct: 303 NGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVK 362
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA--- 287
P+V +YN ++GL ++A +LV EM + + PD FT+ LI G EG+LE A
Sbjct: 363 PDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEI 422
Query: 288 KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAK 347
++ K G ++ F L+ C +G + A + D A +V+ K
Sbjct: 423 RKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCK 482
Query: 348 ELRVEEAKELVE 359
+ V+ +L++
Sbjct: 483 KGDVKTGFKLLK 494
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 107/246 (43%), Gaps = 42/246 (17%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G PD+ +N ++ + ++ A L E+ K+G+R +++FNTL+ G+ +G
Sbjct: 220 GYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQG 279
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKA------------------------- 252
++ M+ V P+V +Y+ ++GL E Q A
Sbjct: 280 FRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLING 339
Query: 253 ----------LELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW---YNKSGCGMN 299
+E+ +M K + PDV T+ LI G G+L EAK+ + G +
Sbjct: 340 HCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPD 399
Query: 300 KAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA----K 355
K + +L+ C++GDL+ A + K E +D ++ +E +V EA +
Sbjct: 400 KFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLR 459
Query: 356 ELVELG 361
E++E G
Sbjct: 460 EMLEAG 465
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 107/223 (47%), Gaps = 6/223 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHK 156
LI K ++A K+F EM R ++F L+ G CV + D +++ + K
Sbjct: 301 LINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRA-DLGMEIYQQMLRK 359
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
G++PD+++YNT+I G L A L+ EM ++G++ D T+ L+ G G
Sbjct: 360 -GVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLES 418
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
A +I + MV + + ++ A + G E Q +A + EM I PD T+ +I
Sbjct: 419 ALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIH 478
Query: 277 GFVNEGNLEEAKRWYNKSGCGMN---KAIFKLLVPFVCEKGDL 316
GF +G+++ + + C + + +L+ +C++G +
Sbjct: 479 GFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQM 521
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 85/175 (48%), Gaps = 1/175 (0%)
Query: 113 KVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKA 172
+++ +M + + V+++N L+ E L ++ + G++PD +Y +I
Sbjct: 351 EIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQR-GLKPDKFTYTMLIDG 409
Query: 173 FVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPN 232
+G L+SA + EM K+GI LD + F L+ GF G+ +AE+ M+ ++P+
Sbjct: 410 CCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPD 469
Query: 233 VRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+Y + G + K +L+ EM+ P V T+ L+ G +G ++ A
Sbjct: 470 DATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNA 524
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 91/213 (42%), Gaps = 8/213 (3%)
Query: 123 CEQTVLS-FNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDS 181
C +LS +LL V+ K + +F + G + ++ ++ A+ D G
Sbjct: 114 CTHKMLSEAQSLLQFVVSRKGKNSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSD 173
Query: 182 ANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLD 241
A + K +++ + L + A +E +++ P+V +N +
Sbjct: 174 AIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMH 233
Query: 242 GLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA---KRWYNKSGCGM 298
L E + +A L GE+ + + P V +F LI G+ GNL++ KR+ ++
Sbjct: 234 RLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFP 293
Query: 299 NKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERC 331
+ + +L+ +C++G LD A + F E C
Sbjct: 294 DVFTYSVLINGLCKEGQLDDA----NKLFLEMC 322
>gi|414868297|tpg|DAA46854.1| TPA: hypothetical protein ZEAMMB73_384018 [Zea mays]
Length = 504
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 131/253 (51%), Gaps = 7/253 (2%)
Query: 110 NARKVFDEMPGRNCEQTVLSFNALLGA-CVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
+A ++ DEMP +T SFN L+ A C +S + V L K+ + G+ P+ V+YNT
Sbjct: 229 DAAQLLDEMPCWGFSRTAASFNTLIAAYCHDSGGMETVLRL-KERMEREGLVPNEVTYNT 287
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
I+ +G + A ++ EM KG+ + ITFNTL+ + + G A K+ E M+
Sbjct: 288 IVHGLCKEGRMHQARRIVNEMRVKGVTPNTITFNTLIHSYVTLGDNEVAMKMHEEMMKAG 347
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
+ ++ +YNA + GL E +T KA +LV E+ + ++ P+ TF ALI G + N E A
Sbjct: 348 LSADLVTYNALILGLCNEGKTWKASQLVQELCAAKLEPNASTFSALIIGQCKKQNPERAL 407
Query: 289 RWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV-DQAPLQLVVDR 344
N K+G N + +L+ + D + A ++ K RC+ D+A L +
Sbjct: 408 DLLNAMKKAGFQPNYYTYSILISTFSKNKDFEGAIDVLKDMLM-RCIAPDKALLHEFFEG 466
Query: 345 LAKELRVEEAKEL 357
L+K ++ A +L
Sbjct: 467 LSKAKKLHLAADL 479
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 91/193 (47%), Gaps = 5/193 (2%)
Query: 126 TVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTL 185
TV S N + + ++ + F+++ + + P++ + N +++A G + A L
Sbjct: 175 TVESCNVFISGALRLRRPEIAISFFREM-RRCRVSPNVYTVNMVMRAKCALGRVVDAAQL 233
Query: 186 LYEMEKKGIRLDLITFNTLLLGF-YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLA 244
L EM G +FNTL+ + + +G ++ E M + PN +YN + GL
Sbjct: 234 LDEMPCWGFSRTAASFNTLIAAYCHDSGGMETVLRLKERMEREGLVPNEVTYNTIVHGLC 293
Query: 245 IEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKA 301
E + +A +V EMR K + P+ TF LI +V G+ E A + + K+G +
Sbjct: 294 KEGRMHQARRIVNEMRVKGVTPNTITFNTLIHSYVTLGDNEVAMKMHEEMMKAGLSADLV 353
Query: 302 IFKLLVPFVCEKG 314
+ L+ +C +G
Sbjct: 354 TYNALILGLCNEG 366
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 70/160 (43%), Gaps = 11/160 (6%)
Query: 208 FYSNGRFADAEKIWETMVNMNVR-----PNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
F S R D + W T+ +R P V S N + G ++ + A+ EMR
Sbjct: 148 FSSCAR--DKKLSWATLTYRAMRAHGMFPTVESCNVFISGALRLRRPEIAISFFREMRRC 205
Query: 263 EINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGC---GMNKAIFKLLVPFVC-EKGDLDF 318
++P+V+T +++ G + +A + ++ C A F L+ C + G ++
Sbjct: 206 RVSPNVYTVNMVMRAKCALGRVVDAAQLLDEMPCWGFSRTAASFNTLIAAYCHDSGGMET 265
Query: 319 AFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
L +R E + ++ +V L KE R+ +A+ +V
Sbjct: 266 VLRLKERMEREGLVPNEVTYNTIVHGLCKEGRMHQARRIV 305
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 89/207 (42%), Gaps = 7/207 (3%)
Query: 56 NTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFT-ARLIALYGKAAMFENARKV 114
N Y V L R I+ ++ + K ++ T LI Y E A K+
Sbjct: 281 NEVTYNTIVHGLCKEGRMHQARRIV-NEMRVKGVTPNTITFNTLIHSYVTLGDNEVAMKM 339
Query: 115 FDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFV 174
+EM ++++NAL+ N K + L ++L +EP+ +++ +I
Sbjct: 340 HEEMMKAGLSADLVTYNALILGLCNEGKTWKASQLVQEL-CAAKLEPNASTFSALIIGQC 398
Query: 175 DKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVR 234
K + + A LL M+K G + + T++ L+ F N F A + + M+ + P+
Sbjct: 399 KKQNPERALDLLNAMKKAGFQPNYYTYSILISTFSKNKDFEGAIDVLKDMLMRCIAPDKA 458
Query: 235 SYNARLDGLAIEKQTKKALELVGEMRS 261
+ +GL+ K+ L L ++RS
Sbjct: 459 LLHEFFEGLSKAKK----LHLAADLRS 481
>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
Length = 2021
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 140/298 (46%), Gaps = 7/298 (2%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
S+I + K+ + + F + G + YT V L N ++ + +L
Sbjct: 210 SIIDSLCKDRQVTEAFNLFSQMVGQG-ISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVN 268
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFD 144
K + + ++ K A ++ D M R E V+++ L+ G C+ S+ D
Sbjct: 269 SKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSE-MD 327
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
E +F D+ + G PD++SY T+I + +D A L EM +K D T+NTL
Sbjct: 328 EAVKVF-DMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTL 386
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+ G GR DA ++ MV P++ +Y+ LD L + ++A+ L+ + + +
Sbjct: 387 MYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNL 446
Query: 265 NPDVFTFYALIKGFVNEGNLEEAKRWY-NKSGCGMNKAI--FKLLVPFVCEKGDLDFA 319
NPD+ + +I G G LE A+ + N S G++ ++ + +++ +C++G L+ A
Sbjct: 447 NPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEA 504
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 32/205 (15%)
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
KLG +PD ++ T+I+ +G + A L +M +G + +++T+ TL+ G G +
Sbjct: 128 KLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTS 187
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
A ++ +M N +P+V Y + +D L ++Q +A L +M + I+PD+FT+ +L+
Sbjct: 188 AAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLV 247
Query: 276 KGFVNEGNLEEAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQ 335
N +CE + N + + + L D
Sbjct: 248 HALCN-----------------------------LCEWKHVTTLLN---QMVNSKILPDV 275
Query: 336 APLQLVVDRLAKELRVEEAKELVEL 360
VVD L KE +V EA E+V++
Sbjct: 276 VIFSTVVDALCKEGKVTEAHEIVDM 300
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 79/169 (46%), Gaps = 3/169 (1%)
Query: 101 LYG--KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLG 158
+YG ++A +F EM R +++++ LL + ++ +E L K +
Sbjct: 387 MYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEAS-N 445
Query: 159 IEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAE 218
+ PD+ YN II G L++A L + KG+ + T+N ++ G G +A
Sbjct: 446 LNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEAN 505
Query: 219 KIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPD 267
K++ M + P+ +YN G +T +A++L+ EM ++ + D
Sbjct: 506 KLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSAD 554
>gi|358346363|ref|XP_003637238.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503173|gb|AES84376.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 663
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 127/235 (54%), Gaps = 4/235 (1%)
Query: 127 VLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLL 186
V++ +++L K E LF+++ +++G++P+ VSY TII + G + A L
Sbjct: 10 VVTCSSILYGFCRHGKLTEAAVLFREM-YEMGLDPNHVSYATIINSLFKSGRVMEAFNLQ 68
Query: 187 YEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIE 246
+M +GI D++T T++ G + G+ +AE+++ET++ +N+ PN +Y+A LDG
Sbjct: 69 SQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKL 128
Query: 247 KQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK---RWYNKSGCGMNKAIF 303
+ + A ++ +M + + P+V TF ++I G+ +G L +A R + N ++
Sbjct: 129 GKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVY 188
Query: 304 KLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
+L+ + G+ D A + CK S R ++++ L + R++EA+ L+
Sbjct: 189 AILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLI 243
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 100/193 (51%), Gaps = 16/193 (8%)
Query: 96 ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPH 155
A LI Y KA + A EM R E++ + F+ LL + DE L D+
Sbjct: 189 AILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYS 248
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
K GI+PD+V+Y ++I + +G+ +A +++ EM++K IR D++ +N L+ G G++
Sbjct: 249 K-GIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKY- 306
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
D + M+ + GLA + +T+ AL+++ EM+S I P+ T+ LI
Sbjct: 307 DPRYVCSRMIEL--------------GLAPDCKTEDALDILNEMKSYGIMPNAVTYNILI 352
Query: 276 KGFVNEGNLEEAK 288
G G +E+A+
Sbjct: 353 GGLCKTGAVEKAE 365
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 5/210 (2%)
Query: 78 EILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGAC 137
+IL K Y + LI K E A DEM T ++ L+ A
Sbjct: 331 DILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAY 390
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLD 197
S+K D++ + + L G+E L YNT+I F G A +L EM K+GI D
Sbjct: 391 SRSEKADKILQIHEKLVAS-GLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISAD 449
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLA----IEKQTKKAL 253
L+T+N L+ G+ + A K + M + PN+ +YN L GL+ +E+ ++
Sbjct: 450 LVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETE 509
Query: 254 ELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
+LV EM + + P+ T+ L+ G+ GN
Sbjct: 510 KLVSEMNERGLVPNAATYDILVSGYGRVGN 539
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 81/181 (44%), Gaps = 1/181 (0%)
Query: 102 YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEP 161
Y K E A V +M + V++F++++ + + +++ + + P
Sbjct: 125 YCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQR-NVMP 183
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
+ + Y +I + G D A+ EM+ + + + F+ LL GR +A +
Sbjct: 184 NTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLI 243
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
M + + P++ +Y + +DG E AL +V EM+ K I DV + ALIKG +
Sbjct: 244 IDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRL 303
Query: 282 G 282
G
Sbjct: 304 G 304
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 99/208 (47%), Gaps = 19/208 (9%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNS---KKFDEVDGLFKDL 153
LI ++ + M A+ V DEM R ++++NAL+ G C S K +F D
Sbjct: 421 LITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVD- 479
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKG----SLDSANTLLYEMEKKGIRLDLITFNTLLLGFY 209
GI P++ +YNT++ + G ++ L+ EM ++G+ + T++ L+ G+
Sbjct: 480 ----GIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGY- 534
Query: 210 SNGRFADAEKIWETMVNMNVR---PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINP 266
GR + +K + M + P +++YN + A + +A EL+ ++ +K P
Sbjct: 535 --GRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIP 592
Query: 267 DVFTFYALIKGFVNEGNLEEAKRWYNKS 294
+ FT+ L G++N E R +S
Sbjct: 593 NSFTYDILTCGWLNLSYEPEIDRSLKRS 620
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 86/207 (41%), Gaps = 52/207 (25%)
Query: 129 SFNALLGACVNSKKFDEV------DGLFK-----------DLPHKLGIEPDLVSYNTIIK 171
+FN V FD V DGLFK + KL + P+ V+Y+ ++
Sbjct: 64 AFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLD 123
Query: 172 AFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRP 231
+ G ++ A +L +MEK+ + ++ITF++++ G+ G + A + MV NV P
Sbjct: 124 GYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMP 183
Query: 232 NVRSYNARLDG-----------------------------------LAIEKQTKKALELV 256
N Y +DG L + +A L+
Sbjct: 184 NTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLI 243
Query: 257 GEMRSKEINPDVFTFYALIKGFVNEGN 283
+M SK I+PD+ + +LI G+ EGN
Sbjct: 244 IDMYSKGIDPDIVNYASLIDGYFKEGN 270
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 80/176 (45%), Gaps = 5/176 (2%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIE--PDLVSY 166
E+A + +EM +++N L+G + ++ + ++ L +E P +++
Sbjct: 327 EDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEM---LVMEFVPTPITH 383
Query: 167 NTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVN 226
++KA+ D + ++ G+ L L +NTL+ F G A+ + + MV
Sbjct: 384 KFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVK 443
Query: 227 MNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEG 282
+ ++ +YNA + G +KAL+ +M I P++ T+ L+ G N G
Sbjct: 444 RGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAG 499
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 62/134 (46%), Gaps = 3/134 (2%)
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
M GI D++T +++L GF +G+ +A ++ M M + PN SY ++ L +
Sbjct: 1 MIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGR 60
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKL 305
+A L +M + I+ D+ T ++ G G +EA+ + K N +
Sbjct: 61 VMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSA 120
Query: 306 LVPFVCEKGDLDFA 319
L+ C+ G ++ A
Sbjct: 121 LLDGYCKLGKMELA 134
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 84/189 (44%), Gaps = 12/189 (6%)
Query: 88 DISKEGFTARLIAL------YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSK 141
++ K G +A L+ Y + E A K + +M + ++N LLG N+
Sbjct: 440 EMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAG 499
Query: 142 KFDEVDGLFKDLPHKL---GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL 198
+E+ + L ++ G+ P+ +Y+ ++ + G+ L EM KG L
Sbjct: 500 LMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTL 559
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDG---LAIEKQTKKALEL 255
T+N L+ + +G+ +A ++ ++ PN +Y+ G L+ E + ++L+
Sbjct: 560 KTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDILTCGWLNLSYEPEIDRSLKR 619
Query: 256 VGEMRSKEI 264
E+ K++
Sbjct: 620 SYEIEVKKL 628
>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
Length = 817
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 133/298 (44%), Gaps = 39/298 (13%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI Y M + A +F+EM + V+++ ++ A K D+ F + +
Sbjct: 403 LIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQ- 461
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ PD +YN +I+ F GSL A L+ E+ G+ LD++ F++++ GR DA
Sbjct: 462 GVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDA 521
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ I++ VN+ + P+ YN +DG + + +KAL + M S I P+V + L+ G
Sbjct: 522 QNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNG 581
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKG-------------DLDFAFN 321
+ G ++E + + G + ++ +++ + E G + A +
Sbjct: 582 YCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMD 641
Query: 322 LC------KRTFSERCL----------------VDQAPLQLVVDRLAKELRVEEAKEL 357
+C + F RC ++ L ++D + + RVEEAK+L
Sbjct: 642 ICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDL 699
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 153/360 (42%), Gaps = 19/360 (5%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
+VI G +KE ++ + D FK+ G + Y V L A+ E L
Sbjct: 227 TVIDGFFKEGDVNKACDLFKEMVQRG-IPPDLVTYNSVVHALCKARAMDKAEAFLRQMVN 285
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
+ + LI Y ++ A +VF EM + V++ + L+G+ K E
Sbjct: 286 KRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKE 345
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
+F + K G PD+ SYN ++ + KG L L M GI D TFN L+
Sbjct: 346 ARDVFDTMAMK-GQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLI 404
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEIN 265
+ + G A I+ M + V+P+V +Y + L + A+E +M + +
Sbjct: 405 KAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVA 464
Query: 266 PDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
PD + + LI+GF G+L +AK ++ +G ++ F ++ +C+ G + A N+
Sbjct: 465 PDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNI 524
Query: 323 CKRTFSERCLVDQAPLQLVVD------RLAKELRVEEA-------KELVELGK-TNSYCR 368
T + D +++D ++ K LRV +A +V G N YC+
Sbjct: 525 FDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCK 584
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 103/209 (49%), Gaps = 4/209 (1%)
Query: 102 YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEP 161
Y E A +VFD M E V+ + L+ + DE LF+++ + GI+P
Sbjct: 547 YCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQR-GIKP 605
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
+ Y+ II + G A +EM + GI +D+ T+N +L G + N F +A ++
Sbjct: 606 STILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLF 665
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
+ + MNV+ N+ + N +DG+ ++ ++A +L + + P V T+ +I + E
Sbjct: 666 KELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKE 725
Query: 282 GNLEEAKRWYNK---SGCGMNKAIFKLLV 307
G +EEA+ ++ +GC N + +V
Sbjct: 726 GLVEEAEDMFSSMQNAGCEPNSRLLNHVV 754
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 141/348 (40%), Gaps = 44/348 (12%)
Query: 53 FRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ----YKDISKEGFTARLIALYGKAAMF 108
R N I ++ AKR +IL H+ D+ + + GK+
Sbjct: 145 LRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQA 204
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
++ ++ E G C V+++N ++ ++ LFK++ + GI PDLV+YN+
Sbjct: 205 DDLLRMMAE-GGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQR-GIPPDLVTYNS 262
Query: 169 IIKAFVDKGSLDSA-------------------NTLLY----------------EMEKKG 193
++ A ++D A N L+Y EM +
Sbjct: 263 VVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHS 322
Query: 194 IRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKAL 253
I D++T + L+ G+ +A +++TM P+V SYN L+G A +
Sbjct: 323 ILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMT 382
Query: 254 ELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFV 310
+L M I PD +TF LIK + N G L++A +N+ G + ++ ++ +
Sbjct: 383 DLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAAL 442
Query: 311 CEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
C G +D A + + D+ ++ + +AKEL+
Sbjct: 443 CRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELI 490
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 108/258 (41%), Gaps = 9/258 (3%)
Query: 40 LVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLI 99
LV K +K+ + + GI V + I I E ++++ + G I
Sbjct: 549 LVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTI 608
Query: 100 ALYGKA--AMFENARKV-----FDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKD 152
LY +FE R V F EM + ++N +L ++ FDE LFK+
Sbjct: 609 -LYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKE 667
Query: 153 LPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNG 212
L + ++ ++++ NT+I ++ A L + + + ++T++ ++ G
Sbjct: 668 L-RAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEG 726
Query: 213 RFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFY 272
+AE ++ +M N PN R N + L + + +A + ++ + + + T
Sbjct: 727 LVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAM 786
Query: 273 ALIKGFVNEGNLEEAKRW 290
L+ F ++G E R+
Sbjct: 787 LLVDLFSSKGTCREQIRF 804
>gi|242054943|ref|XP_002456617.1| hypothetical protein SORBIDRAFT_03g039460 [Sorghum bicolor]
gi|241928592|gb|EES01737.1| hypothetical protein SORBIDRAFT_03g039460 [Sorghum bicolor]
Length = 410
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 99/191 (51%), Gaps = 1/191 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI YGKA NA F++M + +V+++N L+G ++ F D+ +
Sbjct: 184 LIDGYGKAGKMSNALHFFNQMKAAGLQPSVVTYNELIGGFCRARDIAHAIRAFSDMKERR 243
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
+ P V+Y +I AF + +D A +L EMEK G+ +D+ ++ LL G+ A
Sbjct: 244 -LAPTKVTYTILIGAFAKENEMDRAFEMLSEMEKAGLEVDVQSYGVLLHALCMEGKMMHA 302
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
K++++M + V+PN Y+ + G E + KAL L+ EMR + P+V ++ I+
Sbjct: 303 RKLFQSMDSKGVKPNNVLYDMMIYGYGREGSSYKALRLIMEMRKSGLIPNVASYCLTIRL 362
Query: 278 FVNEGNLEEAK 288
NEG +EA+
Sbjct: 363 LCNEGKCQEAE 373
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 136/300 (45%), Gaps = 5/300 (1%)
Query: 64 VQRLANAKRFRWIEEILEHQKQYKDISKE-GFTARLIALYGKAAMFENARKVFDEMPGRN 122
V+RL A R +L + D + + L+ ++ AR+VFD MP
Sbjct: 9 VRRLCAAAEVRSALAVLARGTKSGDAALDVAACTALVHGCCQSGDVAEARRVFDVMPRLG 68
Query: 123 CEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSA 182
+++ AL+ + + L ++ + G+EP+L +YN ++ + G SA
Sbjct: 69 VTPNEVTYTALIHGYFVRGQREMGFALVGEM-RRGGVEPNLYTYNCLVGEWCRTGEFKSA 127
Query: 183 NTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDG 242
L EM KG+ +++++N L+ G +G+ DA +++E M + P++ ++N +DG
Sbjct: 128 RLLFDEMPLKGVVRNVVSYNILIAGLCRHGKLKDAAQLFEAMRREGIHPSMVTFNLLIDG 187
Query: 243 LAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMN 299
+ AL +M++ + P V T+ LI GF ++ A R ++ +
Sbjct: 188 YGKAGKMSNALHFFNQMKAAGLQPSVVTYNELIGGFCRARDIAHAIRAFSDMKERRLAPT 247
Query: 300 KAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
K + +L+ ++ ++D AF + VD +++ L E ++ A++L +
Sbjct: 248 KVTYTILIGAFAKENEMDRAFEMLSEMEKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQ 307
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 126/280 (45%), Gaps = 10/280 (3%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+ + + F++AR +FDEMP + + V+S+N L+ K + LF+ + +
Sbjct: 114 LVGEWCRTGEFKSARLLFDEMPLKGVVRNVVSYNILIAGLCRHGKLKDAAQLFEAM-RRE 172
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
GI P +V++N +I + G + +A +M+ G++ ++T+N L+ GF A A
Sbjct: 173 GIHPSMVTFNLLIDGYGKAGKMSNALHFFNQMKAAGLQPSVVTYNELIGGFCRARDIAHA 232
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ + M + P +Y + A E + +A E++ EM + DV ++ L+
Sbjct: 233 IRAFSDMKERRLAPTKVTYTILIGAFAKENEMDRAFEMLSEMEKAGLEVDVQSYGVLLHA 292
Query: 278 FVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
EG + A++ + + G N ++ +++ +G A L + +
Sbjct: 293 LCMEGKMMHARKLFQSMDSKGVKPNNVLYDMMIYGYGREGSSYKALRLIMEMRKSGLIPN 352
Query: 335 QAPLQLVVDRLAKELRVEEAKELV------ELGKTNSYCR 368
A L + L E + +EA+ L+ L + S CR
Sbjct: 353 VASYCLTIRLLCNEGKCQEAEALIGDMEDAGLQTSESICR 392
>gi|218191860|gb|EEC74287.1| hypothetical protein OsI_09537 [Oryza sativa Indica Group]
Length = 689
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 128/281 (45%), Gaps = 4/281 (1%)
Query: 79 ILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACV 138
+ +H + + + ++ L+ K+ M ARKVFD+M +NA+L C+
Sbjct: 224 VFDHMRAREVVPDAHASSALLTALAKSRMTATARKVFDQMTRAGVAMNTHVYNAMLHVCL 283
Query: 139 NSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL 198
+ + L + G+ D S+NT+I + KG A + ME +G++ D+
Sbjct: 284 KAGDAALAESLMTRMD-AAGVPLDRFSFNTVIALYCRKGMQYEAMCVRERMENQGVKADV 342
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
+T+N+L+ G R +A ++ M V P+ +Y +DG ++A++L GE
Sbjct: 343 VTWNSLIHGLCKERRVKEASQLLREMAMAGVAPDHVTYTTLVDGYCRAGDLEEAVKLRGE 402
Query: 259 MRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSG---CGMNKAIFKLLVPFVCEKGD 315
M + + P V T+ A+++ +G ++E N+ + L+ C++GD
Sbjct: 403 MEAMGMLPGVATYNAILRKLCEDGKMKEVNVLLNEMDERKVQADHVTCNTLINAYCKRGD 462
Query: 316 LDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKE 356
+ A + +R +DQ + +V K ++EAKE
Sbjct: 463 MTSALKVKRRMMESGLQLDQFTYKALVHGFCKAKELDEAKE 503
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 112/262 (42%), Gaps = 37/262 (14%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLP--- 154
+IALY + M A V + M + + V+++N+L+ ++ E L +++
Sbjct: 313 VIALYCRKGMQYEAMCVRERMENQGVKADVVTWNSLIHGLCKERRVKEASQLLREMAMAG 372
Query: 155 -------------------------------HKLGIEPDLVSYNTIIKAFVDKGSLDSAN 183
+G+ P + +YN I++ + G + N
Sbjct: 373 VAPDHVTYTTLVDGYCRAGDLEEAVKLRGEMEAMGMLPGVATYNAILRKLCEDGKMKEVN 432
Query: 184 TLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
LL EM+++ ++ D +T NTL+ + G A K+ M+ ++ + +Y A + G
Sbjct: 433 VLLNEMDERKVQADHVTCNTLINAYCKRGDMTSALKVKRRMMESGLQLDQFTYKALVHGF 492
Query: 244 AIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNK 300
K+ +A E + EM +P+ ++ G N+ N + K G +K
Sbjct: 493 CKAKELDEAKEALFEMMGAGFSPNYSVLSWIVDGLCNKNNAVAVLAIPDELMKRGFPPDK 552
Query: 301 AIFKLLVPFVCEKGDLDFAFNL 322
A+++ L+ +C+KG +D A N+
Sbjct: 553 AVYRSLIRRLCKKGFIDLAGNV 574
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 90/196 (45%), Gaps = 1/196 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+ Y +A E A K+ EM V ++NA+L K EV+ L ++ +
Sbjct: 383 LVDGYCRAGDLEEAVKLRGEMEAMGMLPGVATYNAILRKLCEDGKMKEVNVLLNEMDER- 441
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
++ D V+ NT+I A+ +G + SA + M + G++LD T+ L+ GF +A
Sbjct: 442 KVQADHVTCNTLINAYCKRGDMTSALKVKRRMMESGLQLDQFTYKALVHGFCKAKELDEA 501
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ M+ PN + +DGL + L + E+ + PD + +LI+
Sbjct: 502 KEALFEMMGAGFSPNYSVLSWIVDGLCNKNNAVAVLAIPDELMKRGFPPDKAVYRSLIRR 561
Query: 278 FVNEGNLEEAKRWYNK 293
+G ++ A +N+
Sbjct: 562 LCKKGFIDLAGNVFNE 577
Score = 44.3 bits (103), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 69/160 (43%), Gaps = 8/160 (5%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+ + KA + A++ EM G + ++ N V + +L K
Sbjct: 488 LVHGFCKAKELDEAKEALFEMMGAGFSPNYSVLSWIVDGLCNKNNAVAVLAIPDEL-MKR 546
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G PD Y ++I+ KG +D A + EM+ KG+ D + + TL + + G+ A
Sbjct: 547 GFPPDKAVYRSLIRRLCKKGFIDLAGNVFNEMQGKGLEADCLVYATLACAYLTAGKPVAA 606
Query: 218 EKIWETMV--NMNVRPNVRSYNARL----DGLAIEKQTKK 251
I M + + P + +Y + DG+ ++ QTK+
Sbjct: 607 LDILNEMAKKQLYITPQIYNYKSSCKFAGDGV-LQFQTKQ 645
>gi|410109935|gb|AFV61047.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
origanoides]
Length = 431
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 143/299 (47%), Gaps = 14/299 (4%)
Query: 86 YKDISKEGFTARL------IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
Y++I + G+ A L + + K A+ VFD + +V+S N L+ +
Sbjct: 130 YEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSXNTLMNGYIR 189
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
DE L K + G++PD+ +Y+ +I + +D AN EM KG+ + +
Sbjct: 190 LGDLDEGFRL-KSVMLASGVQPDVYTYSVLINGLCKESKMDDANEXFDEMLVKGLVPNGV 248
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
TF TL+ G NGR A++I++ M++ ++ P++ +YN + GL + K+A +L+ +M
Sbjct: 249 TFTTLIDGHCKNGRVDLAKEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDM 308
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLEEA---KRWYNKSGCGMNKAIFKLLVPFVCEKGDL 316
K + PD T+ LI G EG+L+ A ++ + ++ ++ L+ +C++G
Sbjct: 309 SMKGLKPDKITYTTLIBGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGLCQEGRS 368
Query: 317 DFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA----KELVELGKTNSYCRYNL 371
A + + S R D ++++ K+ V + KE+ G S YN+
Sbjct: 369 VDAEKMLREMLSVRLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNV 427
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 89/180 (49%), Gaps = 1/180 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K + A++++ +M ++ ++++N L+ + L D+ K
Sbjct: 253 LIDGHCKNGRVDLAKEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSMK- 311
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD ++Y T+I +G LDSA M ++ IRLD + + L+ G GR DA
Sbjct: 312 GLKPDKITYTTLIBGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGLCQEGRSVDA 371
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
EK+ M+++ ++P+ +Y ++ + K +L+ EM+ P V T+ L+ G
Sbjct: 372 EKMLREMLSVRLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMNG 431
>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 112/232 (48%), Gaps = 5/232 (2%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K + A +F E+ G+ V +++ L+ NS + +E LF ++ L I PD+
Sbjct: 236 KDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEM-MSLNIMPDV 294
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
V++N ++ +G L A ++ M +KG+ + T+N+L+ G+ + +A +++
Sbjct: 295 VTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDA 354
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M+ PNV SYN ++G ++ +A EL EM + + P+ F + LI G G
Sbjct: 355 MITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGR 414
Query: 284 LEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCL 332
EA+ + GC + +L+ +C+ G LD A L R + CL
Sbjct: 415 HCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRL-FRAMQDSCL 465
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 117/239 (48%), Gaps = 4/239 (1%)
Query: 124 EQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSAN 183
E ++F++L+ KF F ++ G +P+L +YNTIIK F G A
Sbjct: 151 EPDAVTFSSLINGLCFEDKFARAMEFFDEMVAS-GYQPNLHTYNTIIKGFCKIGKTTVAV 209
Query: 184 TLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
LL +M+K G R D++ +NT++ G + ++A I+ + VRP+V +Y+ + GL
Sbjct: 210 GLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGL 269
Query: 244 AIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK---RWYNKSGCGMNK 300
Q ++A L EM S I PDV TF L+ EG L EA+ + + G N
Sbjct: 270 CNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNY 329
Query: 301 AIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
A + L+ C + + A + ++ C+ + ++++ K R++EA+EL +
Sbjct: 330 ATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFD 388
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 108/253 (42%), Gaps = 41/253 (16%)
Query: 124 EQTVLSFNALLGACVNSKKFDEVDGLFKDLPH--KLGIEPDLVSYNTIIKAFVDKGSLDS 181
E+ V FN L+ + VD F L KLG EPD V+++++I +
Sbjct: 116 ERDVFHFNILINC---FSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFAR 172
Query: 182 ANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLD 241
A EM G + +L T+NT++ GF G+ A + + M RP++ YN +D
Sbjct: 173 AMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIID 232
Query: 242 GLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKA 301
GL ++ +AL++ E++ K + PDVFT+ L+ G N EEA +N+
Sbjct: 233 GLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNE-------- 284
Query: 302 IFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA----KEL 357
S + D ++VD+L KE + EA K +
Sbjct: 285 ------------------------MMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIM 320
Query: 358 VELGKTNSYCRYN 370
+E G +Y YN
Sbjct: 321 IEKGVEPNYATYN 333
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 106/215 (49%), Gaps = 4/215 (1%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
F A + FDEM + + ++N ++ K GL K + K G PD+V YN
Sbjct: 170 FARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMD-KAGGRPDIVIYN 228
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
TII + A + E++ KG+R D+ T++ L+ G ++ + +A ++ M+++
Sbjct: 229 TIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSL 288
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
N+ P+V ++N +D L E +A ++ M K + P+ T+ +L+ G+ + + EA
Sbjct: 289 NIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEA 348
Query: 288 KRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFA 319
+ ++ GC N + +L+ C+ +D A
Sbjct: 349 RMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEA 383
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 84/182 (46%), Gaps = 3/182 (1%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEPD 162
K M A+ + M + E ++N+L+ G C+ +K F E +F + K G P+
Sbjct: 306 KEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVF-EARMVFDAMITK-GCMPN 363
Query: 163 LVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWE 222
+VSYN +I + +D A L EM +G+ + +NTL+ G GR +A ++++
Sbjct: 364 VVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFK 423
Query: 223 TMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEG 282
M P++ + LD L AL L M+ + P++ T+ LI+ G
Sbjct: 424 DMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKSG 483
Query: 283 NL 284
+
Sbjct: 484 KI 485
>gi|255660816|gb|ACU25577.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
Length = 418
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 130/272 (47%), Gaps = 24/272 (8%)
Query: 66 RLANAKRFR----WIEEILEHQKQ----------YKDISKEGFTARL------IALYGKA 105
RL +FR ++LEH + Y+D + G+ A L + + K
Sbjct: 90 RLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEDSLECGYPASLYFFNILMHRFCKE 149
Query: 106 AMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVS 165
+ A+ VFD + T +SFN L+ + DE L K+ G++PD+ +
Sbjct: 150 GEIKLAQSVFDAITKWGLRPTAVSFNTLMNGYIRLGDLDEGFRL-KNAMQASGVQPDVYT 208
Query: 166 YNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMV 225
Y+ +I + +D AN L EM G+ + +TF TL+ G NGR A +I++ M+
Sbjct: 209 YSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML 268
Query: 226 NMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLE 285
+ ++ P++ +YN + GL + K+A +L+ EM K + PD T+ LI G EG+LE
Sbjct: 269 SQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKVTYTTLIDGSCKEGDLE 328
Query: 286 EA---KRWYNKSGCGMNKAIFKLLVPFVCEKG 314
A ++ K ++ + L+ +C++G
Sbjct: 329 TAFEYRKRMIKENIRLDDVAYTALISGLCQEG 360
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 83/173 (47%), Gaps = 1/173 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K + A +++ +M ++ ++++N L+ + L ++ K
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMK- 305
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD V+Y T+I +G L++A M K+ IRLD + + L+ G GR DA
Sbjct: 306 GLKPDKVTYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDA 365
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
EK+ M+++ ++P + +Y ++ + +L+ EM+ P V T
Sbjct: 366 EKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVT 418
>gi|356497981|ref|XP_003517834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 543
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/391 (22%), Positives = 171/391 (43%), Gaps = 50/391 (12%)
Query: 26 SVIRGIYKENNLK---RLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEH 82
+++ G+ E N+ R VD K T I G + ++ ++++ +E
Sbjct: 101 TIVNGLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKK-MEE 159
Query: 83 QKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKK 142
Q D++ ++A + L +FE A +F +M G+ + + ++N L+ N +
Sbjct: 160 QNCNLDVT--AYSAVVDGLCKDGMVFE-ALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDR 216
Query: 143 FDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFN 202
+ E L ++ K GI PD+ ++N I F+ G + A ++ M GI +++T+N
Sbjct: 217 WKEAAPLLANMMRK-GIMPDVQTFNVIAGRFLKTGMISRAKSIFSFMGHMGIEHNVVTYN 275
Query: 203 TLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
+++ + DA ++++ M+ PN+ +YN+ + G K KA+ +GEM +
Sbjct: 276 SIIGAHCMLNQMKDAMEVFDLMIRKGCLPNIVTYNSLIHGWCETKNMNKAMYFLGEMVNN 335
Query: 263 EINPDVFTFYALIKGFVNEGNLEEAKRWY---NKSG-------CG--------------- 297
++PDV T+ LI GF G AK + +K G C
Sbjct: 336 GLDPDVVTWSTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEA 395
Query: 298 -------------MNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDR 344
++ I+ +++ +C G L+ A L S+ +D ++++
Sbjct: 396 MSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMING 455
Query: 345 LAKELRVEEAKELV----ELGKTNSYCRYNL 371
L KE +++A++L+ E G C YN+
Sbjct: 456 LCKEGLLDDAEDLLMKMEENGCPPDECTYNV 486
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 102/202 (50%), Gaps = 4/202 (1%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
++A +VFD M + C ++++N+L+ +K ++ ++ + G++PD+V+++T
Sbjct: 288 KDAMEVFDLMIRKGCLPNIVTYNSLIHGWCETKNMNKAMYFLGEMVNN-GLDPDVVTWST 346
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
+I F G +A L + M K G DL T +L G + ++A ++ + MN
Sbjct: 347 LIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMN 406
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
++ Y+ L+G+ + ALEL + SK + DV T+ +I G EG L++A+
Sbjct: 407 SDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAE 466
Query: 289 RWYNK---SGCGMNKAIFKLLV 307
K +GC ++ + + V
Sbjct: 467 DLLMKMEENGCPPDECTYNVFV 488
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 81/173 (46%), Gaps = 3/173 (1%)
Query: 124 EQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSA 182
E ++++F ++ G CV + F D +G E D + II G +A
Sbjct: 93 EPSIVTFTTIVNGLCVEGNVAQAIR--FVDHLKDMGYESDRYTRGAIINGLCKVGHSSAA 150
Query: 183 NTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDG 242
+ L +ME++ LD+ ++ ++ G +G +A ++ M ++PN+ +YN + G
Sbjct: 151 LSYLKKMEEQNCNLDVTAYSAVVDGLCKDGMVFEALDLFSQMTGKGIQPNLFTYNCLIHG 210
Query: 243 LAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSG 295
L + K+A L+ M K I PDV TF + F+ G + AK ++ G
Sbjct: 211 LCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFLKTGMISRAKSIFSFMG 263
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 67/135 (49%)
Query: 153 LPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNG 212
L K+G+EP +V++ TI+ +G++ A + ++ G D T ++ G G
Sbjct: 86 LMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCKVG 145
Query: 213 RFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFY 272
+ A + M N +V +Y+A +DGL + +AL+L +M K I P++FT+
Sbjct: 146 HSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDGMVFEALDLFSQMTGKGIQPNLFTYN 205
Query: 273 ALIKGFVNEGNLEEA 287
LI G N +EA
Sbjct: 206 CLIHGLCNFDRWKEA 220
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 84/180 (46%), Gaps = 1/180 (0%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A EM + V++++ L+G + K LF + HK G PDL + I+
Sbjct: 325 AMYFLGEMVNNGLDPDVVTWSTLIGGFCKAGKPVAAKELFFVM-HKHGQLPDLQTCAIIL 383
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
A +L E+EK LD+I ++ +L G S+G+ DA +++ + + V+
Sbjct: 384 DGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVK 443
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
+V +YN ++GL E A +L+ +M PD T+ ++G + + ++ ++
Sbjct: 444 IDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLLRRYEISKSTKY 503
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 63/134 (47%), Gaps = 1/134 (0%)
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
E LF++L K+ + D++ Y+ I+ G L+ A L + KG+++D++T+N +
Sbjct: 394 EAMSLFREL-EKMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIM 452
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+ G G DAE + M P+ +YN + GL + K+ + + M+ K
Sbjct: 453 INGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLLRRYEISKSTKYLMFMKGKGF 512
Query: 265 NPDVFTFYALIKGF 278
+ T LI F
Sbjct: 513 RANATTTKLLINYF 526
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 67/148 (45%), Gaps = 3/148 (2%)
Query: 213 RFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFY 272
+ A + + M + V+PNV ++N ++ L T ++G M + P + TF
Sbjct: 41 HYTTAISLIKHMSYIGVKPNVSTHNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFT 100
Query: 273 ALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSE 329
++ G EGN+ +A R+ + G ++ ++ +C+ G A + K+ +
Sbjct: 101 TIVNGLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQ 160
Query: 330 RCLVDQAPLQLVVDRLAKELRVEEAKEL 357
C +D VVD L K+ V EA +L
Sbjct: 161 NCNLDVTAYSAVVDGLCKDGMVFEALDL 188
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 65/147 (44%), Gaps = 1/147 (0%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K A +F E+ N + ++ ++ +L +S K ++ LF L K G++ D+
Sbjct: 388 KCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSK-GVKIDV 446
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
V+YN +I +G LD A LL +ME+ G D T+N + G + + K
Sbjct: 447 VTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLLRRYEISKSTKYLMF 506
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTK 250
M R N + ++ + K+ +
Sbjct: 507 MKGKGFRANATTTKLLINYFSANKENR 533
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/191 (19%), Positives = 72/191 (37%), Gaps = 39/191 (20%)
Query: 127 VLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLL 186
V FN L G K + L K + + +G++P++ ++N +I
Sbjct: 26 VKDFNLLFGIVAKMKHYTTAISLIKHMSY-IGVKPNVSTHNIVINCLC------------ 72
Query: 187 YEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIE 246
RL+ F +LG M + V P++ ++ ++GL +E
Sbjct: 73 --------RLNHTVFGFSVLGL---------------MFKIGVEPSIVTFTTIVNGLCVE 109
Query: 247 KQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIF 303
+A+ V ++ D +T A+I G G+ A + K C ++ +
Sbjct: 110 GNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAY 169
Query: 304 KLLVPFVCEKG 314
+V +C+ G
Sbjct: 170 SAVVDGLCKDG 180
>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
Length = 661
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 128/267 (47%), Gaps = 19/267 (7%)
Query: 99 IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKL 157
+AL+G M E +FD+M V++FN L+ G C+ + E L + K
Sbjct: 196 LALFG--YMVETG-SLFDQMVEIGLTPVVITFNTLINGLCLEGRVL-EAAALVNKMVGK- 250
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ D+V+Y TI+ G SA LL +ME+ I+ D++ ++ ++ +G +DA
Sbjct: 251 GLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDA 310
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ ++ M+ + PNV +YN +DG + A L+ +M +EINPDV TF ALI
Sbjct: 311 QYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISA 370
Query: 278 FVNEGNLEEAKRWYNKSGCGMNKAIFKLLVPF------VCEKGDLDFAFNLCKRTFSERC 331
V EG L EA++ ++ +++ IF V + C+ D A K F
Sbjct: 371 SVKEGKLFEAEKLCDEM---LHRCIFPDTVTYNSMIYGFCKHNRFDDA----KHMFDLMA 423
Query: 332 LVDQAPLQLVVDRLAKELRVEEAKELV 358
D ++D + RV+E +L+
Sbjct: 424 SPDVVTFNTIIDVYCRAKRVDEGMQLL 450
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 122/251 (48%), Gaps = 10/251 (3%)
Query: 101 LYG--KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLG 158
+YG K F++A+ +FD M + V++FN ++ +K+ DE L +++ + G
Sbjct: 403 IYGFCKHNRFDDAKHMFDLMASPD----VVTFNTIIDVYCRAKRVDEGMQLLREISRR-G 457
Query: 159 IEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAE 218
+ + +YNT+I F + +L++A L EM G+ D IT N LL GF N + +A
Sbjct: 458 LVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEAL 517
Query: 219 KIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGF 278
+++E + + + +YN + G+ + +A +L + + PDV T+ +I GF
Sbjct: 518 ELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGF 577
Query: 279 VNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQ 335
+ + +A ++K +G + + + L+ + G++D + L S D
Sbjct: 578 CGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDA 637
Query: 336 APLQLVVDRLA 346
+++V D +
Sbjct: 638 FTIKMVADLIT 648
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 96/194 (49%), Gaps = 6/194 (3%)
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
F A + A + +FE A K+ DEM R +++N+++ +FD+ +F
Sbjct: 364 FNALISASVKEGKLFE-AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF--- 419
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
L PD+V++NTII + +D LL E+ ++G+ + T+NTL+ GF
Sbjct: 420 --DLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDN 477
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
A+ +++ M++ V P+ + N L G ++ ++ALEL ++ +I+ D +
Sbjct: 478 LNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNI 537
Query: 274 LIKGFVNEGNLEEA 287
+I G ++EA
Sbjct: 538 IIHGMCKGSKVDEA 551
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 99/224 (44%), Gaps = 17/224 (7%)
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
V N +I FV D A +L +ME + I L++ +FN L+ F + + + +
Sbjct: 107 VDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGK 166
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG----------EMRSKEINPDVFTFYA 273
+ + +P+V ++N L GL +E + +AL L G +M + P V TF
Sbjct: 167 LTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVITFNT 226
Query: 274 LIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSER 330
LI G EG + EA NK G ++ + +V +C+ GD A NL +
Sbjct: 227 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH 286
Query: 331 CLVDQAPLQLVVDRLAKELRVEEAK----ELVELGKTNSYCRYN 370
D ++DRL K+ +A+ E++E G + YN
Sbjct: 287 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYN 330
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 115/249 (46%), Gaps = 23/249 (9%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
++A FD M T + N ++G V + D L++ + + I ++ S+N
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIR-RIPLNIYSFN 145
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA---------- 217
+IK F D L + + ++ K G + D++TFNTLL G R ++A
Sbjct: 146 ILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVET 205
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+++ MV + + P V ++N ++GL +E + +A LV +M K ++ DV T+ ++ G
Sbjct: 206 GSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNG 265
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKG---DLDFAFN------LCKR 325
G+ + A +K + + I+ ++ +C+ G D + F+ +
Sbjct: 266 MCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPN 325
Query: 326 TFSERCLVD 334
F+ C++D
Sbjct: 326 VFTYNCMID 334
>gi|255660780|gb|ACU25559.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
Length = 418
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 143/313 (45%), Gaps = 4/313 (1%)
Query: 5 SRLLSCSFSTTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTV 64
S + + T T ++ S + Y E+ R + + + +FR +
Sbjct: 49 SAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVL 108
Query: 65 QRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCE 124
+ L K F+ + E + + F L+ + K A+ VFD + +
Sbjct: 109 EHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLR 168
Query: 125 QTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANT 184
+V+SFN L+ + DE L K+ G++PD+ +Y+ +I + +D AN
Sbjct: 169 PSVVSFNTLMNGYIKLGDLDEGFRL-KNAMQASGVQPDVYTYSVLINGLCKESKMDDANE 227
Query: 185 LLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLA 244
L EM G+ + +TF TL+ G NGR A +I++ M++ ++ P++ +YN + GL
Sbjct: 228 LFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLC 287
Query: 245 IEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA---KRWYNKSGCGMNKA 301
+ K+A +L+ EM K + PD T+ LI G EG+LE A ++ K ++
Sbjct: 288 KKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDV 347
Query: 302 IFKLLVPFVCEKG 314
+ L+ +C++G
Sbjct: 348 AYTALISGLCQEG 360
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 119/232 (51%), Gaps = 4/232 (1%)
Query: 130 FNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEM 189
FN L+ + V + +F D K + P +VS+NT++ ++ G LD L M
Sbjct: 139 FNILMHSFVKEGEIRLAQSVF-DAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAM 197
Query: 190 EKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQT 249
+ G++ D+ T++ L+ G + DA ++++ M++ + PN ++ +DG +
Sbjct: 198 QASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRV 257
Query: 250 KKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLL 306
A+E+ +M S+ ++PD+ T+ LI G +G+L++A+ ++ G +K + L
Sbjct: 258 DLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTL 317
Query: 307 VPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
+ C++GDL+ AF KR E +D ++ L +E R +A++++
Sbjct: 318 IDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKML 369
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 105/206 (50%), Gaps = 2/206 (0%)
Query: 80 LEHQKQYKDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACV 138
L++ Q + + +T + LI K + ++A ++FDEM ++F L+
Sbjct: 193 LKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHC 252
Query: 139 NSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL 198
+ + D ++K + + + PDL++YNT+I KG L A L+ EM KG++ D
Sbjct: 253 KNGRVDLAMEIYKQMLSQ-SLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
IT+ TL+ G G A + + M+ N+R + +Y A + GL E ++ A +++ E
Sbjct: 312 ITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371
Query: 259 MRSKEINPDVFTFYALIKGFVNEGNL 284
M S + P++ T+ +I F +G++
Sbjct: 372 MLSVGLKPEIGTYTMIINEFCKKGDV 397
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 104/234 (44%), Gaps = 4/234 (1%)
Query: 102 YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEP 161
Y K + ++ + M + V +++ L+ K D+ + LF ++ G+ P
Sbjct: 181 YIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDN-GLVP 239
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
+ V++ T+I G +D A + +M + + DLIT+NTL+ G G A+ +
Sbjct: 240 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLI 299
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
+ M ++P+ +Y +DG E + A E M + I D + ALI G E
Sbjct: 300 DEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQE 359
Query: 282 GNLEEAKRWYNKS-GCGMNKAI--FKLLVPFVCEKGDLDFAFNLCKRTFSERCL 332
G +A++ + G+ I + +++ C+KGD+ L K + C+
Sbjct: 360 GRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGCM 413
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 83/173 (47%), Gaps = 1/173 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K + A +++ +M ++ ++++N L+ + L ++ K
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMK- 305
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD ++Y T+I +G L++A M K+ IRLD + + L+ G GR DA
Sbjct: 306 GLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDA 365
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
EK+ M+++ ++P + +Y ++ + +L+ EM+ P V T
Sbjct: 366 EKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGCMPSVVT 418
>gi|410109897|gb|AFV61028.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
macropoda]
Length = 412
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 133/273 (48%), Gaps = 26/273 (9%)
Query: 66 RLANAKRFRWI-----EEILEHQKQ----------YKDISKEGFTARL------IALYGK 104
RL +F W+ ++LEH + Y++I + G+ A L + + K
Sbjct: 77 RLTREHKF-WVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCK 135
Query: 105 AAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLV 164
A+ VFD + +V+S+N L+ + DE L K G++PD+
Sbjct: 136 DGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL-KSAMLASGVQPDVY 194
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
+Y+ +I + +D AN L EM KG+ + +TF TL+ G NGR A +I++ M
Sbjct: 195 TYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 254
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
++ ++ P++ +YN + GL + K+A L+ EM KE+ PD T+ LI G EG+L
Sbjct: 255 LSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKELKPDKITYTTLIDGCCKEGDL 314
Query: 285 EEA---KRWYNKSGCGMNKAIFKLLVPFVCEKG 314
+ A ++ + +++ + L+ +C++G
Sbjct: 315 DSAFEHRKRMIQENIRLDEVAYTALISGLCQEG 347
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 88/180 (48%), Gaps = 1/180 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K + A +++ +M ++ ++++N L+ + L ++ K
Sbjct: 234 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMK- 292
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
++PD ++Y T+I +G LDSA M ++ IRLD + + L+ G GR DA
Sbjct: 293 ELKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDA 352
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
EK+ M+N+ ++P+ R+Y ++ + K +L+ EM+ P V T+ L+ G
Sbjct: 353 EKMLREMLNVGLKPDSRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 412
>gi|297848576|ref|XP_002892169.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338011|gb|EFH68428.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 662
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 143/344 (41%), Gaps = 39/344 (11%)
Query: 52 RFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENA 111
++ N Y V LA AK I I ++++ LI +GK M E
Sbjct: 147 KYTHNLECYVSLVDVLALAKDVDRIRFICSEIRKFEFPMTVSPGNSLIKSFGKLGMVEEL 206
Query: 112 RKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIK 171
V+ +M E T+ ++N L+ V++ D + +F+ + I+PD+V+YNT+IK
Sbjct: 207 LWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESG-RIKPDVVTYNTMIK 265
Query: 172 AFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSN-------------------- 211
+ G A L ME KG+ D IT+ T++ Y++
Sbjct: 266 GYCKAGQTQKALEKLRVMETKGLEADKITYMTMIQACYADSDFSSCVALYQEMDEKGLQV 325
Query: 212 ---------------GRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELV 256
G+ + ++E M+ +PNV Y +DG A + A+ L+
Sbjct: 326 PPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLL 385
Query: 257 GEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEK 313
M + NPDV T+ ++ G G +EEA ++ +G +N + L+ + +
Sbjct: 386 HRMIDEGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTCRFNGLAINSMFYSSLIDGLGKA 445
Query: 314 GDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
G +D A L + + C D ++D K +V+EA L
Sbjct: 446 GRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEALAL 489
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 92/216 (42%), Gaps = 9/216 (4%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
GIEP L +YN ++ V +DSA + ME I+ D++T+NT++ G+ G+ A
Sbjct: 217 GIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDVVTYNTMIKGYCKAGQTQKA 276
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ M + + +Y + + + L EM K + F +I G
Sbjct: 277 LEKLRVMETKGLEADKITYMTMIQACYADSDFSSCVALYQEMDEKGLQVPPHAFSLVIGG 336
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
EG L E + + G N AI+ +L+ + G ++ A L R E D
Sbjct: 337 LCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDEGFNPD 396
Query: 335 QAPLQLVVDRLAKELRVEEAKELVELGKTNSYCRYN 370
+VV+ L K RVEEA + + CR+N
Sbjct: 397 VVTYSVVVNGLCKNGRVEEAMDYFQT------CRFN 426
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 60/136 (44%)
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
F + LI GKA + A ++F+EM + C + +NAL+ A K DE LFK +
Sbjct: 434 FYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEALALFKRM 493
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
+ G + + +Y +I + + A L M KGI L G +G+
Sbjct: 494 EEEEGCDQTVYTYTILISGMFKEHRNEEALKLWDMMIDKGITPTAACLRALSTGLCLSGK 553
Query: 214 FADAEKIWETMVNMNV 229
A A KI + + M V
Sbjct: 554 VARACKILDELAPMGV 569
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 76/201 (37%), Gaps = 3/201 (1%)
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
+L Y +++ +D + E+ K + + N+L+ F G + +W
Sbjct: 151 NLECYVSLVDVLALAKDVDRIRFICSEIRKFEFPMTVSPGNSLIKSFGKLGMVEELLWVW 210
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
M + P + +YN ++GL A + M S I PDV T+ +IKG+
Sbjct: 211 RKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDVVTYNTMIKGYCKA 270
Query: 282 GNLEEA---KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPL 338
G ++A R G +K + ++ D L + + V
Sbjct: 271 GQTQKALEKLRVMETKGLEADKITYMTMIQACYADSDFSSCVALYQEMDEKGLQVPPHAF 330
Query: 339 QLVVDRLAKELRVEEAKELVE 359
LV+ L KE ++ E + E
Sbjct: 331 SLVIGGLCKEGKLNEGYAVFE 351
>gi|255660778|gb|ACU25558.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
Length = 418
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 109/207 (52%), Gaps = 4/207 (1%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A+ VFD + + +V+SFN L+ + DE L K+ G++PD+ +Y+ +I
Sbjct: 155 AQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRL-KNAMQASGVQPDVYTYSVLI 213
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
+ +D AN L EM G+ + +TF TL+ G NGR A +I++ M++ ++
Sbjct: 214 NGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLS 273
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA--- 287
P++ +YN + GL + K+A +L+ EM K + PD T+ LI G EG+LE A
Sbjct: 274 PDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEY 333
Query: 288 KRWYNKSGCGMNKAIFKLLVPFVCEKG 314
++ K ++ + L+ +C++G
Sbjct: 334 RKRMIKENIRLDDVAYTALISGLCQEG 360
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 83/173 (47%), Gaps = 1/173 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K + A +++ +M ++ ++++N L+ + L ++ K
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMK- 305
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD ++Y T+I +G L++A M K+ IRLD + + L+ G GR DA
Sbjct: 306 GLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDA 365
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
EK+ M+++ ++P + +Y ++ + +L+ EM+ P V T
Sbjct: 366 EKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
>gi|357498969|ref|XP_003619773.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494788|gb|AES75991.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 452
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 130/260 (50%), Gaps = 4/260 (1%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K + +A ++ +M + V+++N L+ C+ + E GLF + K I+PD+
Sbjct: 131 KDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLK-NIKPDI 189
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
++N ++ +G + A +L M K+ + D+IT+N+L+ G++ + A ++ T
Sbjct: 190 YTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATFVFNT 249
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M V P+V SY+ ++GL K +A+ L+ EM SK + P+ T+ +LI G G
Sbjct: 250 MARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGR 309
Query: 284 LEEAKRWYNKS---GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL 340
+ +A N+ G + + L+ +C+ +D A L + + D +
Sbjct: 310 IFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTI 369
Query: 341 VVDRLAKELRVEEAKELVEL 360
+VD L K R+++A+E+ ++
Sbjct: 370 LVDGLCKNGRLKDAQEVYQI 389
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 129/284 (45%), Gaps = 14/284 (4%)
Query: 86 YKDISKEGFTARLIALYG-------KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACV 138
+ D+ +GF ++ YG KA A +V + G + V+ ++ ++ +
Sbjct: 72 HDDVIAKGFQLNQVS-YGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMYSTIIYSLC 130
Query: 139 NSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL 198
K + L+ + K I PD+++YNT++ + G L A L +M K I+ D+
Sbjct: 131 KDKLVIDAFDLYSQMLLK-RISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNIKPDI 189
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
TFN L+ G G A + M+ +V P+V +YN+ +DG + KQ KA +
Sbjct: 190 YTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATFVFNT 249
Query: 259 MRSKEINPDVFTFYALIKGFVNEGNLEEA----KRWYNKSGCGMNKAIFKLLVPFVCEKG 314
M + + PDV ++ +I G ++EA K ++KS N + L+ + + G
Sbjct: 250 MARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKS-MAPNTVTYSSLIDGLHKSG 308
Query: 315 DLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
+ A++L + D ++D L K +V++A L+
Sbjct: 309 RIFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLL 352
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 99/210 (47%), Gaps = 10/210 (4%)
Query: 122 NCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL-- 179
N T+ F + + V F V L + + GI+ DLV+ N ++ F G +
Sbjct: 3 NPTPTIFEFGKIFASLVKINHFHTVISLSHQMELR-GIQTDLVNLNILVNCFCHLGQVCL 61
Query: 180 -DSANTLLY---EMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRS 235
D L+ ++ KG +L+ +++ TL+ G G A ++ + + V+PNV
Sbjct: 62 NDKVKETLHFHDDVIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVM 121
Query: 236 YNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK-- 293
Y+ + L +K A +L +M K I+PDV T+ L+ G + G L+EA +N+
Sbjct: 122 YSTIIYSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQML 181
Query: 294 -SGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
+ F +LV +C++G++ A N+
Sbjct: 182 LKNIKPDIYTFNILVDGLCKEGEMKKARNV 211
>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 119/264 (45%), Gaps = 4/264 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI Y KA A + DEM +N + ++ N +L KK +E L K
Sbjct: 424 LINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSS-ARKR 482
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G D VSY T+I + G++D A L EM++K I +T+N ++ G G+ A
Sbjct: 483 GYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQA 542
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ + P+ +YN L G E +KA + +M PDVFT L++G
Sbjct: 543 ISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRG 602
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
EG LE+A + +N G ++ + L+ +C++G LD AFNL + D
Sbjct: 603 LCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPD 662
Query: 335 QAPLQLVVDRLAKELRVEEAKELV 358
++ L R+ EA+E +
Sbjct: 663 HYTYNAIITALTDSGRIREAEEFM 686
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 118/231 (51%), Gaps = 10/231 (4%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTI 169
+R+ F++ V +FN ++ G C+ +K D V+ F ++ K PD V+YNTI
Sbjct: 192 SREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVE--FLNVMGKYNCSPDNVTYNTI 249
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
+ A KG L A LL +M+ +G+ + T+N L+ G+ G +A + E M N+
Sbjct: 250 LDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNL 309
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
P+V +YN ++GL E + ++A +L EM + ++ PDV ++ LI G + + EA +
Sbjct: 310 LPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFK 369
Query: 290 W---YNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRT----FSERCLV 333
++ G N ++V + C++G +D A N + FS C+
Sbjct: 370 LLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVT 420
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 141/297 (47%), Gaps = 18/297 (6%)
Query: 70 AKRFRWIEEILEHQKQYKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVL 128
++ F+ +EE+ E K + T ++ Y K ++A +M +
Sbjct: 365 SEAFKLLEEMSE-----KGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCV 419
Query: 129 SFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
++N L+ + E ++ K ++ D V+ NTI++ + L+ A LL
Sbjct: 420 TYNTLINGYCKAGNMGEAFRTMDEMGRK-NMKMDSVTLNTILRTLCREKKLEEAYKLLSS 478
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
K+G +D +++ TL++G++ +G A K+W+ M + P+ +YN + GL +
Sbjct: 479 ARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGK 538
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKAIFK---- 304
T++A+ + E+ + PD T+ ++ G+ EG++E+A +++NK M + FK
Sbjct: 539 TEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNK----MVENSFKPDVF 594
Query: 305 ---LLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
+L+ +C +G L+ A L S+ +D ++ L KE R+++A L+
Sbjct: 595 TCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLL 651
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 122/270 (45%), Gaps = 6/270 (2%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGR--FRTNTGIYTGTVQRLANAKRFRWIEEILEHQ 83
++I G K N+ + F+ ++GR + ++ ++ L K+ ++L
Sbjct: 423 TLINGYCKAGNMG---EAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSA 479
Query: 84 KQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKF 143
++ E LI Y K + A K++DEM + + +++N ++G K
Sbjct: 480 RKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKT 539
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT 203
++ +L G+ PD +YNTI+ + +G ++ A +M + + D+ T N
Sbjct: 540 EQAISKLNELLES-GLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNI 598
Query: 204 LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
LL G G A K++ T V+ + +YN + L E + A L+ EM KE
Sbjct: 599 LLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKE 658
Query: 264 INPDVFTFYALIKGFVNEGNLEEAKRWYNK 293
+ PD +T+ A+I + G + EA+ + +K
Sbjct: 659 LGPDHYTYNAIITALTDSGRIREAEEFMSK 688
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 95/203 (46%), Gaps = 6/203 (2%)
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL---LGFYSNGRFADA 217
P +T I A+V G A + +M++ +R +L+T NTLL + + S+ + +
Sbjct: 133 PSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFS 192
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ + + + + PNV ++N + G +E + K A+E + M +PD T+ ++
Sbjct: 193 REAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDA 252
Query: 278 FVNEGNLEEAKRW---YNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
+G L +A+ G N+ + +LV C+ G L A N+ + L D
Sbjct: 253 LCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPD 312
Query: 335 QAPLQLVVDRLAKELRVEEAKEL 357
++++ L E R+EEA +L
Sbjct: 313 VWTYNMLINGLCNEGRIEEAFKL 335
>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
Length = 436
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 128/292 (43%), Gaps = 5/292 (1%)
Query: 43 KFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALY 102
K + L RF+ Y+ + L R E++E +Y + ++
Sbjct: 66 KLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYAPPDALTY-GPIVERL 124
Query: 103 GKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPD 162
K ++A +EM R + +N +L +K +E LF+ + K I P+
Sbjct: 125 CKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMV-KQRINPN 183
Query: 163 LVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWE 222
+V+YNT+I +++A L EM KG +++NTL+ GF A+ +++
Sbjct: 184 VVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFD 243
Query: 223 TMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEG 282
MV N PNV +Y +DGL+ + + A E++ M K + P+V T+ LI GF
Sbjct: 244 KMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVR 303
Query: 283 NLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERC 331
++EA + + G + +L+ +C L+ AF L + RC
Sbjct: 304 RVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRC 355
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 101/246 (41%), Gaps = 9/246 (3%)
Query: 52 RFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENA 111
R N Y + L A R E+ + + E LI + K A
Sbjct: 179 RINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAA 238
Query: 112 RKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE----VDGLFKDLPHKLGIEPDLVSYN 167
+ VFD+M NC V+++ L+ S K +DG+ K G+ P++ +Y+
Sbjct: 239 KDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKK-----GVTPNVATYS 293
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
+I F +D A+ LL +M +GI ++T+N LL + DA K++ M
Sbjct: 294 CLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQR 353
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
P V +YN L L KQ A L EM +K PD T+ L G G + EA
Sbjct: 354 RCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEA 413
Query: 288 KRWYNK 293
+ K
Sbjct: 414 QELMEK 419
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 102/217 (47%), Gaps = 8/217 (3%)
Query: 26 SVIRGIYKENNL---KRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEH 82
++I G K+ +L K + DK +S+ + N YT + L+ + + + E+L+
Sbjct: 224 TLIDGFCKKKDLVAAKDVFDKMVRSNCV----PNVVTYTTLIDGLSKSGKVQAAAEVLDG 279
Query: 83 QKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKK 142
+ + LI + K + A K+ ++M + TV+++N LL + + K
Sbjct: 280 MVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADK 339
Query: 143 FDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFN 202
++ LF+ + + P +V+YNT+++A LD A+ L EM KG D IT++
Sbjct: 340 LEDAFKLFRGMAQRR-CHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYD 398
Query: 203 TLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNAR 239
TL G G+ +A+++ E M P RS +
Sbjct: 399 TLAWGLTRAGKVHEAQELMEKMKLTKRNPFGRSSQGK 435
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 78/169 (46%), Gaps = 1/169 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI K+ + A +V D M + V +++ L+ ++ DE L + + +
Sbjct: 260 LIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQ- 318
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
GI P +V+YN ++ + L+ A L M ++ ++T+NTLL + + A
Sbjct: 319 GIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGA 378
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINP 266
+++ M+ P+ +Y+ GL + +A EL+ +M+ + NP
Sbjct: 379 HRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRNP 427
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 259 MRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGD 315
M + + P TF + GF G LE+ K Y ++G + + + +L+ +C+ G+
Sbjct: 1 MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60
Query: 316 LDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
D A+ L +R +++ L K RVEEA+EL+E
Sbjct: 61 FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIE 104
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 62/162 (38%), Gaps = 2/162 (1%)
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
TFNT+ GF GR +++++ MV Y + L +A +L+ M
Sbjct: 12 TFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKLLHTM 71
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSG--CGMNKAIFKLLVPFVCEKGDLD 317
R K + +I +EEA+ K + + +V +C+ +D
Sbjct: 72 RLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYAPPDALTYGPIVERLCKTKRID 131
Query: 318 FAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
A + + D V+ L +E +VEEA+ L E
Sbjct: 132 DALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFE 173
>gi|242086791|ref|XP_002439228.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
gi|241944513|gb|EES17658.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
Length = 653
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 142/342 (41%), Gaps = 10/342 (2%)
Query: 16 ATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRW 75
A T P+ +I + +EN + + G + N Y V+ L R
Sbjct: 129 ARPTAPRLYNHLIDALLRENMVGAVALVCGNMRKDG-VQPNVFTYNLLVRALCQNHRVGA 187
Query: 76 IEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLG 135
++L+ + +++ + A +V P S+NA++
Sbjct: 188 ARKMLDEMATKGCPPDDVTYGTIVSALCTLGRVDEATEVLSAAP-----PVAASYNAVIL 242
Query: 136 ACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIR 195
A + EV + D+ + G++P++++Y TI+ AF G L A +L M G
Sbjct: 243 ALCREFRMQEVFAVVGDMVGR-GLQPNVITYTTIVNAFCKAGELRMACAILARMVITGCT 301
Query: 196 LDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALEL 255
++ TF L+ G +++GR DA +W+ MV P+ SYN + GL K A +
Sbjct: 302 PNVATFTALVGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSV 361
Query: 256 VGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCE 312
+ +M P+ T+ LI GF G+L+ A +N +SGC N ++ +V C+
Sbjct: 362 LNDMEQHGCFPNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCK 421
Query: 313 KGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA 354
K + A +L + E C + ++ L RV A
Sbjct: 422 KLMFNQAESLIDKMLVENCPPNTVTFNTLIRSLCNCRRVGRA 463
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 140/302 (46%), Gaps = 13/302 (4%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
+++ G++ + + +D +K G + +T Y ++ L + + +L +Q
Sbjct: 309 ALVGGLFNDGRVHDALDMWKCMVAEG-WAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQ 367
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
+ + LI + KA + A ++++M C+ V+ + ++G F++
Sbjct: 368 HGCFPNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQ 427
Query: 146 VDGLFKDLPHKLGIE---PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFN 202
+ L K+ +E P+ V++NT+I++ + + A + +EM + G + T+N
Sbjct: 428 AESLID----KMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYN 483
Query: 203 TLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
LL G + G DA ++ M N + ++ +YN + GL + ++A+ VG M +
Sbjct: 484 ELLHGLFREGNCGDALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVR 543
Query: 263 EINPDVFTFYALIKGFVNEGNLEEAKRW----YNKSGCGMNKAIFKLLVPFVCEKGDLDF 318
I PD FTF A+I + EG + A W N CG N ++ +L+ +C + L+
Sbjct: 544 GIQPDAFTFTAIIHAYCKEGEVRMAA-WILGAMNVVNCGRNILVYTILMAELCNQDKLED 602
Query: 319 AF 320
A
Sbjct: 603 AM 604
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 135/324 (41%), Gaps = 19/324 (5%)
Query: 12 FSTTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAK 71
FST A AT P S+ R + +L R D G + V+RLA A
Sbjct: 23 FSTAAAATSP----SLPRKMNHAGDLPRGAGPPPAPEDAG---DAARAHEAAVRRLAAAG 75
Query: 72 RFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVF-DEMPGRNCEQTVLS- 129
++ L+ + EG + + +A + A K F + C +
Sbjct: 76 DVDGVQLELQEMRLRGVPCTEGALVAAVGAFARAGAPDRALKTFYRAVHDLGCARPTAPR 135
Query: 130 -FNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
+N L+ A + V + ++ K G++P++ +YN +++A + +A +L E
Sbjct: 136 LYNHLIDALLRENMVGAVALVCGNM-RKDGVQPNVFTYNLLVRALCQNHRVGAARKMLDE 194
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
M KG D +T+ T++ + GR +A ++ P SYNA + L E +
Sbjct: 195 MATKGCPPDDVTYGTIVSALCTLGRVDEATEVLSA-----APPVAASYNAVILALCREFR 249
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKL 305
++ +VG+M + + P+V T+ ++ F G L A + +GC N A F
Sbjct: 250 MQEVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAILARMVITGCTPNVATFTA 309
Query: 306 LVPFVCEKGDLDFAFNLCKRTFSE 329
LV + G + A ++ K +E
Sbjct: 310 LVGGLFNDGRVHDALDMWKCMVAE 333
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 93/238 (39%), Gaps = 41/238 (17%)
Query: 86 YKDISKEG------FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
+ D+++ G ++ ++ K MF A + D+M NC ++FN L+ + N
Sbjct: 397 WNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSLCN 456
Query: 140 SKKFDEVDGLFKD---------------LPHKL-------------------GIEPDLVS 165
++ G+F + L H L GIE LV+
Sbjct: 457 CRRVGRALGVFHEMRRHGCPPNGRTYNELLHGLFREGNCGDALQMVIEMQNHGIELSLVT 516
Query: 166 YNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMV 225
YNT++ A + M +GI+ D TF ++ + G A I M
Sbjct: 517 YNTVVSGLCQMRMGREAMFFVGRMIVRGIQPDAFTFTAIIHAYCKEGEVRMAAWILGAMN 576
Query: 226 NMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG-FVNEG 282
+N N+ Y + L + + + A+ + +M + I P+ T+ L++G F N G
Sbjct: 577 VVNCGRNILVYTILMAELCNQDKLEDAMVYLLKMLYEGIYPNTVTWNVLVRGVFRNLG 634
>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 675
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 113/221 (51%), Gaps = 4/221 (1%)
Query: 102 YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEP 161
+ K + A ++ +M C +++N L+ +S + ++ L +++ +LG+E
Sbjct: 200 FCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEML-RLGLEV 258
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
+Y+ +I+ + +KG LD A+ L EM +G L+T+NT++ G GR +DA K+
Sbjct: 259 SAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLL 318
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
+ MVN N+ P++ SYN + G +A L E+R + + P V T+ LI G
Sbjct: 319 DVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRM 378
Query: 282 GNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFA 319
G+L+ A R + K G + F +LV C+ G+L A
Sbjct: 379 GDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMA 419
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 94/195 (48%), Gaps = 3/195 (1%)
Query: 101 LYG--KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLG 158
+YG K +ARK+ D M +N ++S+N L+ E LF +L + G
Sbjct: 302 MYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFR-G 360
Query: 159 IEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAE 218
+ P +V+YNT+I G LD A L EM K G D+ TF L+ GF G A+
Sbjct: 361 LVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAK 420
Query: 219 KIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGF 278
++++ M+N ++P+ +Y R+ G KA + EM ++ PD+ T+ I G
Sbjct: 421 ELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGL 480
Query: 279 VNEGNLEEAKRWYNK 293
GNL+EA K
Sbjct: 481 HKLGNLKEASELVKK 495
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 87/176 (49%), Gaps = 1/176 (0%)
Query: 116 DEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVD 175
+EM R ++++N + E L K + + G+ PD V+Y +II A +
Sbjct: 459 EEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYN-GLVPDHVTYTSIIHAHLM 517
Query: 176 KGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRS 235
G L A + EM KGI ++T+ L+ + GR A + M V PNV +
Sbjct: 518 AGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVIT 577
Query: 236 YNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY 291
YNA ++GL ++ +A + EM++K I+P+ +T+ LI N G+ +EA R Y
Sbjct: 578 YNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLY 633
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 111/250 (44%), Gaps = 4/250 (1%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A+++FDEM R + ++ + + + G+ +++ + G PDL++YN I
Sbjct: 419 AKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLAR-GFPPDLITYNVFI 477
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
G+L A+ L+ +M G+ D +T+ +++ G A ++ M++ +
Sbjct: 478 DGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIF 537
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
P+V +Y + A+ + K A+ EM K ++P+V T+ ALI G +++A ++
Sbjct: 538 PSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKF 597
Query: 291 YNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAK 347
+ + G NK + +L+ C G A L K D ++ L K
Sbjct: 598 FTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHSALLKHLNK 657
Query: 348 ELRVEEAKEL 357
+ + + L
Sbjct: 658 DYKSHVVRHL 667
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 113/260 (43%), Gaps = 38/260 (14%)
Query: 101 LYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIE 160
+Y K +M E VF +M + + + N +L + +V ++ + GI
Sbjct: 128 IYAKKSMLEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIR 187
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKG--------------------------- 193
P +V+YNT++ +F +G + A LL +M+K G
Sbjct: 188 PTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKEL 247
Query: 194 ----IRLDL----ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAI 245
+RL L T++ L+ G+ G+ +A ++ E M++ P + +YN + GL
Sbjct: 248 IQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCK 307
Query: 246 EKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAI 302
+ A +L+ M +K + PD+ ++ LI G+ GN+ EA + + G +
Sbjct: 308 WGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVT 367
Query: 303 FKLLVPFVCEKGDLDFAFNL 322
+ L+ +C GDLD A L
Sbjct: 368 YNTLIDGLCRMGDLDVAMRL 387
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 90/192 (46%), Gaps = 4/192 (2%)
Query: 173 FVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD-AEKIWETMVNMNVRP 231
+ K L+ + Y+M KG+ DL N +L D A +++ MV +RP
Sbjct: 129 YAKKSMLEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRP 188
Query: 232 NVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY 291
V +YN LD + + ++AL+L+ +M+ P+ T+ L+ G + G LE+AK
Sbjct: 189 TVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELI 248
Query: 292 N---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKE 348
+ G ++ + L+ CEKG LD A L + S + ++ L K
Sbjct: 249 QEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKW 308
Query: 349 LRVEEAKELVEL 360
RV +A++L+++
Sbjct: 309 GRVSDARKLLDV 320
>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
Length = 559
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 122/252 (48%), Gaps = 4/252 (1%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A+ +F E+ R TV+SFN L+ S D+ L K + + PD+ +Y+ +I
Sbjct: 244 AQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRL-KRFMMENRVFPDVFTYSVLI 302
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
+G LD AN L EM +G+ + +TF TL+ G GR +I++ M+ V+
Sbjct: 303 NGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVK 362
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA--- 287
P+V +YN ++GL ++A +LV EM + + PD FT+ LI G EG+LE A
Sbjct: 363 PDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEI 422
Query: 288 KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAK 347
++ K G ++ F L+ C +G + A + D A +V+ K
Sbjct: 423 RKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCK 482
Query: 348 ELRVEEAKELVE 359
+ V+ +L++
Sbjct: 483 KGDVKTGFKLLK 494
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 107/246 (43%), Gaps = 42/246 (17%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G PD+ +N ++ + ++ A L E+ K+G+R +++FNTL+ G+ +G
Sbjct: 220 GYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQG 279
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKA------------------------- 252
++ M+ V P+V +Y+ ++GL E Q A
Sbjct: 280 FRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLING 339
Query: 253 ----------LELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW---YNKSGCGMN 299
+E+ +M K + PDV T+ LI G G+L EAK+ + G +
Sbjct: 340 HCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPD 399
Query: 300 KAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA----K 355
K + +L+ C++GDL+ A + K E +D ++ +E +V EA +
Sbjct: 400 KFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLR 459
Query: 356 ELVELG 361
E++E G
Sbjct: 460 EMLEAG 465
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 105/217 (48%), Gaps = 6/217 (2%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEPD 162
K ++A K+F EM R ++F L+ G CV + D +++ + K G++PD
Sbjct: 307 KEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRA-DLGMEIYQQMLRK-GVKPD 364
Query: 163 LVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWE 222
+++YNT+I G L A L+ EM ++G++ D T+ L+ G G A +I +
Sbjct: 365 VITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRK 424
Query: 223 TMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEG 282
MV + + ++ A + G E Q +A + EM I PD T+ +I GF +G
Sbjct: 425 EMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKG 484
Query: 283 NLEEAKRWYNKSGCGMN---KAIFKLLVPFVCEKGDL 316
+++ + + C + + +L+ +C++G +
Sbjct: 485 DVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQM 521
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 85/175 (48%), Gaps = 1/175 (0%)
Query: 113 KVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKA 172
+++ +M + + V+++N L+ E L ++ + G++PD +Y +I
Sbjct: 351 EIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQR-GLKPDKFTYTMLIDG 409
Query: 173 FVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPN 232
+G L+SA + EM K+GI LD + F L+ GF G+ +AE+ M+ ++P+
Sbjct: 410 CCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPD 469
Query: 233 VRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+Y + G + K +L+ EM+ P V T+ L+ G +G ++ A
Sbjct: 470 DATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNA 524
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 91/213 (42%), Gaps = 8/213 (3%)
Query: 123 CEQTVLS-FNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDS 181
C +LS +LL V+ K + +F + G + ++ ++ A+ D G
Sbjct: 114 CTHKMLSEAQSLLQFVVSRKGKNSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSD 173
Query: 182 ANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLD 241
A + K +++ + L + A +E +++ P+V +N +
Sbjct: 174 AIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMH 233
Query: 242 GLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA---KRWYNKSGCGM 298
L E + +A L GE+ + + P V +F LI G+ GNL++ KR+ ++
Sbjct: 234 RLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFP 293
Query: 299 NKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERC 331
+ + +L+ +C++G LD A + F E C
Sbjct: 294 DVFTYSVLINGLCKEGQLDDA----NKLFLEMC 322
>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 566
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 135/290 (46%), Gaps = 10/290 (3%)
Query: 76 IEE---ILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNA 132
IEE +L+H + + + A L +L + + + A +V D C V++
Sbjct: 155 IEEALRVLDHTSVAPNAAT--YDAVLCSLCDRGKL-KQAMQVLDRQLQSKCYPDVVTCTV 211
Query: 133 LLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKK 192
L+ A + LF ++ K G +PD+V+YN +IK F +G LD A L ++
Sbjct: 212 LIDATCKESGVGQAMKLFNEMRGK-GCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSY 270
Query: 193 GIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKA 252
G + D+I+ N +L S GR+ DA K+ TM+ P+V ++N ++ L + KA
Sbjct: 271 GCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKA 330
Query: 253 LELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPF 309
L ++ M P+ +F LI+GF N ++ A GC + + +L+
Sbjct: 331 LNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTA 390
Query: 310 VCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+C+ G +D A + + S+ C V+D L K + E A EL+E
Sbjct: 391 LCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLE 440
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 1/186 (0%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
+ A + + M R C ++++N LL A K D+ + L K G P L+SYN
Sbjct: 362 IDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSK-GCSPSLISYN 420
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
T+I + G + A LL EM KG++ DLIT +++ G G+ +A K + +
Sbjct: 421 TVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGF 480
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
++PN YN+ + GL +QT A++ + +M + P ++ LIKG EG EEA
Sbjct: 481 GIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLIKGITYEGLAEEA 540
Query: 288 KRWYNK 293
+ N+
Sbjct: 541 SKLSNE 546
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 120/251 (47%), Gaps = 4/251 (1%)
Query: 110 NARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTI 169
+A K+ M + C +V++FN L+ + + + +P K G P+ S+N +
Sbjct: 294 DAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMP-KHGHTPNSRSFNPL 352
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
I+ F ++ +D A L M +G D++T+N LL +G+ DA I + +
Sbjct: 353 IQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGC 412
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
P++ SYN +DGL + + A+EL+ EM K + PD+ T +++ G EG + EA +
Sbjct: 413 SPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIK 472
Query: 290 WYNK-SGCGM--NKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLA 346
+++ G G+ N I+ ++ +C+ A + + C +A ++ +
Sbjct: 473 FFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLIKGIT 532
Query: 347 KELRVEEAKEL 357
E EEA +L
Sbjct: 533 YEGLAEEASKL 543
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 83/203 (40%), Gaps = 41/203 (20%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G D SYN +I A+ G ++ A L ++ + + T++ +L G+ A
Sbjct: 134 GAVIDANSYNVLINAYCKSGEIEEA---LRVLDHTSVAPNAATYDAVLCSLCDRGKLKQA 190
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ + + P+V + +D E +A++L EMR K PDV T+ LIKG
Sbjct: 191 MQVLDRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKG 250
Query: 278 FVNEGNLEEA-----------------------------KRWYN---------KSGCGMN 299
F EG L+EA RW + + GC +
Sbjct: 251 FCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPS 310
Query: 300 KAIFKLLVPFVCEKGDLDFAFNL 322
F +L+ F+C+KG L A N+
Sbjct: 311 VVTFNILINFLCQKGLLGKALNV 333
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 98/210 (46%), Gaps = 7/210 (3%)
Query: 56 NTGIYTGTVQRLANAKRF-RWIE--EILEHQKQYKDISKEGFTARLIALYGKAAMFENAR 112
N+ + +Q N K R IE EI+ + Y DI + L AL K ++A
Sbjct: 345 NSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVT--YNILLTALC-KDGKVDDAV 401
Query: 113 KVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKA 172
+ ++ + C +++S+N ++ + K + L +++ +K G++PDL++ +++
Sbjct: 402 VILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYK-GLKPDLITCTSVVGG 460
Query: 173 FVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPN 232
+G + A + ++ GI+ + +N++++G + + A MV +P
Sbjct: 461 LSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPT 520
Query: 233 VRSYNARLDGLAIEKQTKKALELVGEMRSK 262
SY + G+ E ++A +L E+ S+
Sbjct: 521 EASYTTLIKGITYEGLAEEASKLSNELYSR 550
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 75/183 (40%), Gaps = 9/183 (4%)
Query: 175 DKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVR 234
KG+L+ NT L E+ I L NG + + E M N P+V
Sbjct: 55 SKGALNGVNTSL-NFEESEIHH--------LCRLIRNGELEEGSRFLEYMTNKGKIPDVV 105
Query: 235 SYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS 294
+ A + +TK A ++G + D ++ LI + G +EEA R + +
Sbjct: 106 ACTALIREFCKIGRTKNATRIMGILEESGAVIDANSYNVLINAYCKSGEIEEALRVLDHT 165
Query: 295 GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA 354
N A + ++ +C++G L A + R +C D +++D KE V +A
Sbjct: 166 SVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTVLIDATCKESGVGQA 225
Query: 355 KEL 357
+L
Sbjct: 226 MKL 228
>gi|302755288|ref|XP_002961068.1| hypothetical protein SELMODRAFT_75649 [Selaginella moellendorffii]
gi|300172007|gb|EFJ38607.1| hypothetical protein SELMODRAFT_75649 [Selaginella moellendorffii]
Length = 461
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/374 (22%), Positives = 162/374 (43%), Gaps = 39/374 (10%)
Query: 24 IGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQ 83
+ +RG+ K N+ ++ +++ + R + Y+ V L AKR E+LE
Sbjct: 54 LNGCLRGLCKAGNVDGALEFLREAKNSFSLRASVSTYSILVAALTAAKRNNDALELLEQM 113
Query: 84 KQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCE------------------- 124
+ + + + +I K+ M + A+ + + M RNC
Sbjct: 114 ESVGLEADKDTYSLIIHSLCKSGMVDKAKVLVERMISRNCVPDARIYDPVIEELSKTGRV 173
Query: 125 ---------------QTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTI 169
+V+++N+L+ + +++ +F + + G PD+ +YN +
Sbjct: 174 DEAVEIAKEADAKHCTSVVTYNSLVLGFLKARRLKRGIKVFTRMA-RTGPSPDIYTYNIL 232
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
+ G A LL M + G+ D++TFN+L+ G + R+ A + + MV+
Sbjct: 233 FEGLSRHGLWRFAYKLLPRMNQDGVLPDVVTFNSLINGLVEDNRYHRAVTLIQEMVSRGC 292
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
PN +Y L LA +T + +EL + +++ P+V+T+ ++ G L++A R
Sbjct: 293 DPNAITYTILLKWLARNARTDECVELFQRLLDRKLAPNVYTYNTVMSALCKAGRLDQAHR 352
Query: 290 WYN---KSGCGMNKAI-FKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRL 345
+ S C AI ++ L+ +C K +L+ A L C D A +V
Sbjct: 353 LFGVMLASDCTPPNAITYRALIHGLCLKMELERAVLLLDAMAKRGCAPDVACYGTIVAAF 412
Query: 346 AKELRVEEAKELVE 359
K+ R++EA EL+E
Sbjct: 413 CKQGRIDEAFELLE 426
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 107/234 (45%), Gaps = 11/234 (4%)
Query: 103 GKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPD 162
+ ++ A K+ M V++FN+L+ V ++ L +++ + G +P+
Sbjct: 237 SRHGLWRFAYKLLPRMNQDGVLPDVVTFNSLINGLVEDNRYHRAVTLIQEMVSR-GCDPN 295
Query: 163 LVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWE 222
++Y ++K D L + + + ++ T+NT++ GR A +++
Sbjct: 296 AITYTILLKWLARNARTDECVELFQRLLDRKLAPNVYTYNTVMSALCKAGRLDQAHRLFG 355
Query: 223 TMVNMNVRP-NVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
M+ + P N +Y A + GL ++ + ++A+ L+ M + PDV + ++ F +
Sbjct: 356 VMLASDCTPPNAITYRALIHGLCLKMELERAVLLLDAMAKRGCAPDVACYGTIVAAFCKQ 415
Query: 282 GNLEEAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQ 335
G ++EA + +K +F+ LV +C+ L R+FSE+ D+
Sbjct: 416 GRIDEAFELLERMPFAGDKVMFRTLVRALCK---------LQLRSFSEQISCDE 460
Score = 38.9 bits (89), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 60/140 (42%), Gaps = 2/140 (1%)
Query: 149 LFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKK-GIRLDLITFNTLLLG 207
L KD+ G + N ++ G++D A L E + +R + T++ L+
Sbjct: 38 LLKDMAEN-GSTLSIQDLNGCLRGLCKAGNVDGALEFLREAKNSFSLRASVSTYSILVAA 96
Query: 208 FYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPD 267
+ R DA ++ E M ++ + + +Y+ + L KA LV M S+ PD
Sbjct: 97 LTAAKRNNDALELLEQMESVGLEADKDTYSLIIHSLCKSGMVDKAKVLVERMISRNCVPD 156
Query: 268 VFTFYALIKGFVNEGNLEEA 287
+ +I+ G ++EA
Sbjct: 157 ARIYDPVIEELSKTGRVDEA 176
>gi|302761794|ref|XP_002964319.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
gi|300168048|gb|EFJ34652.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
Length = 384
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 129/277 (46%), Gaps = 8/277 (2%)
Query: 23 FIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEH 82
I +R K ++ RL++ K+S + + +Y V L N+ R E+IL+
Sbjct: 23 IIHGYLRQKSKLDHALRLLEVMKESGK----KPDEILYNCLVNGLVNSGRLEAAEKILDD 78
Query: 83 QKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKK 142
KQ K + LI Y A ++ RK+F EM + ++NAL+
Sbjct: 79 MKQDKVSANLVTYTNLIKEYANAGRLQDCRKLFQEMKDKGESPNSWTYNALIQGYGRKGL 138
Query: 143 FDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFN 202
F E L+ ++ +G D+ +YN I + +G L+ LL EM+ KG+ D +T+N
Sbjct: 139 FKEALELYDEMD-GVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPPDQVTYN 197
Query: 203 TLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
TLL + F A +I M RPN+ +YN L E+ +A +L ++SK
Sbjct: 198 TLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENLKSK 257
Query: 263 EINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGC 296
+ P++ T+ A++ + G EA + ++ ++GC
Sbjct: 258 GVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGC 294
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 128/273 (46%), Gaps = 8/273 (2%)
Query: 38 KRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTAR 97
++++D K+ + N YT ++ ANA R + ++ + K +
Sbjct: 73 EKILDDMKQD----KVSANLVTYTNLIKEYANAGRLQDCRKLFQEMKDKGESPNSWTYNA 128
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI YG+ +F+ A +++DEM G C + V ++N + ++++ L ++ K
Sbjct: 129 LIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDEMDTK- 187
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ PD V+YNT++ + K A+ +L EM + G R ++ T+N +L A+A
Sbjct: 188 GVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQSVAEA 247
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+++E + + V PN+ +Y+A L +A +L EM P + + LI+
Sbjct: 248 TQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCIIAYSGLIES 307
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLV 307
+ + G +EA + KSG + I+ L+
Sbjct: 308 YGHHGMYQEALACFQDMRKSGIVPDTKIYTALM 340
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 90/180 (50%), Gaps = 2/180 (1%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSK-KFDEVDGLFKDLPHKLGIEPDLVSYNTI 169
A +F M CE TV+++ ++ + K K D L + + G +PD + YN +
Sbjct: 1 ACSLFYRMMKDGCEATVVTYTVIIHGYLRQKSKLDHALRLLEVMKES-GKKPDEILYNCL 59
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
+ V+ G L++A +L +M++ + +L+T+ L+ + + GR D K+++ M +
Sbjct: 60 VNGLVNSGRLEAAEKILDDMKQDKVSANLVTYTNLIKEYANAGRLQDCRKLFQEMKDKGE 119
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
PN +YNA + G + K+ALEL EM DV T+ I + G LE+ +R
Sbjct: 120 SPNSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMER 179
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 61/117 (52%), Gaps = 1/117 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+++LYG+ ++ A K++DEM C +++++ L+ + + + E F+D+ K
Sbjct: 269 MLSLYGRHGLYTEAAKLWDEMIEAGCIPCIIAYSGLIESYGHHGMYQEALACFQDM-RKS 327
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRF 214
GI PD Y ++ A+ G A L +EM K+G D IT+ L+ F + GR
Sbjct: 328 GIVPDTKIYTALMDAYGKAGRCREAELLYFEMTKEGFVPDGITYGILVRAFANAGRL 384
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/127 (19%), Positives = 58/127 (45%), Gaps = 1/127 (0%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A ++F+ + + +++++A+L + E L+ ++ + G P +++Y+ +I
Sbjct: 247 ATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMI-EAGCIPCIIAYSGLI 305
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
+++ G A +M K GI D + L+ + GR +AE ++ M
Sbjct: 306 ESYGHHGMYQEALACFQDMRKSGIVPDTKIYTALMDAYGKAGRCREAELLYFEMTKEGFV 365
Query: 231 PNVRSYN 237
P+ +Y
Sbjct: 366 PDGITYG 372
>gi|255660788|gb|ACU25563.1| pentatricopeptide repeat-containing protein [Verbena hastata]
Length = 418
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 109/207 (52%), Gaps = 4/207 (1%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A+ VFD + + +V+SFN L+ + DE L K+ G++PD+ +Y+ +I
Sbjct: 155 AQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRL-KNAMQASGVQPDVYTYSVLI 213
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
+ +D AN L EM G+ + +TF TL+ G NGR A +I++ M++ ++
Sbjct: 214 NGLCKESKMDDANELFDEMIDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLS 273
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA--- 287
P++ +YN + GL + K+A +L+ EM K + PD T+ LI G EG+LE A
Sbjct: 274 PDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEY 333
Query: 288 KRWYNKSGCGMNKAIFKLLVPFVCEKG 314
++ K ++ + L+ +C++G
Sbjct: 334 RKRMIKENIRLDDVAYTALISGLCQEG 360
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 83/173 (47%), Gaps = 1/173 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K + A +++ +M ++ ++++N L+ + L ++ K
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMK- 305
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD ++Y T+I +G L++A M K+ IRLD + + L+ G GR DA
Sbjct: 306 GLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDA 365
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
EK+ M+++ ++P + +Y ++ + +L+ EM+ P V T
Sbjct: 366 EKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
Length = 939
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 124/254 (48%), Gaps = 3/254 (1%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
E+AR++ + + + V+++ L+ + +E + + K++ I D V+Y
Sbjct: 270 EDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGM 329
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
+I + +G +D A + EM GI ++L +NT++ G GR + +K+ + M ++
Sbjct: 330 MINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVG 389
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
+RP+ SYN +DG E +KA E+ M + T+ L+KGF + +++A
Sbjct: 390 MRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDAL 449
Query: 289 R-WY--NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRL 345
R W+ K G N+ L+ + + G + A NL K T + + V++ L
Sbjct: 450 RLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGL 509
Query: 346 AKELRVEEAKELVE 359
K R+ EA+EL++
Sbjct: 510 CKIGRMAEAEELLD 523
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 104/190 (54%), Gaps = 1/190 (0%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K+ +A+ +F+ + + ++++L+ C S DE L +D+ G+ P++
Sbjct: 712 KSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSL-RDVMLSAGLTPNI 770
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
++YN++I G L A L +++ KGI + IT+NTL+ + G+ +A K+ +
Sbjct: 771 ITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQK 830
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
MV ++P V +Y+ + GL + ++A++L+ +M ++P+ T+ LI G++ GN
Sbjct: 831 MVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGN 890
Query: 284 LEEAKRWYNK 293
+EE + Y++
Sbjct: 891 MEEISKLYDE 900
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/380 (21%), Positives = 162/380 (42%), Gaps = 37/380 (9%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
+++ G++K ++ ++ +K++ G N + + L R EE+L+ K+
Sbjct: 469 TLLDGLFKAGKTEQALNLWKETLARG-LAKNVITFNTVINGLCKIGRMAEAEELLDRMKE 527
Query: 86 YKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
+ + T R L Y K A + ++M +V FN+ + +K++
Sbjct: 528 LR-CPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWH 586
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
+V+ + ++ + G+ P+LV+Y +I + +G+L A L +EM G+ ++ + L
Sbjct: 587 KVNDIHSEMSAR-GLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSAL 645
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLD----------------------- 241
+ FY G+ +A + + +VN+++ P +D
Sbjct: 646 MSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNV 705
Query: 242 ---GLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA---KRWYNKSG 295
GL + A L +R+K PD FT+ +LI G G+++EA + +G
Sbjct: 706 IIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAG 765
Query: 296 CGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA- 354
N + L+ +C+ G L A NL + S+ + ++D KE + EA
Sbjct: 766 LTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAF 825
Query: 355 ---KELVELGKTNSYCRYNL 371
+++VE G + Y++
Sbjct: 826 KLKQKMVEEGIQPTVITYSI 845
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 129/281 (45%), Gaps = 18/281 (6%)
Query: 96 ARLIALYGKAAMFENARKVFDEMPG-------------RNCEQTVLSFNALLGACVNSKK 142
A+L+ + +A F +AR + +P R+ + +SF+ LL A ++ +
Sbjct: 104 AQLLHILARARRFHDARALLSSLPPHAEPLFPHLAEVYRDFTFSAVSFDLLLRAHADAGQ 163
Query: 143 FDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFN 202
+F + K+G P L S N ++ V G A + +M G+ D T
Sbjct: 164 LSSALNVFDGMG-KVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVA 222
Query: 203 TLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
+ + +GR A A + E M M + N+ +Y+A +D T+ A ++ ++ K
Sbjct: 223 IMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRK 282
Query: 263 EINPDVFTFYALIKGFVNEGNLEEAKRWYNK----SGCGMNKAIFKLLVPFVCEKGDLDF 318
++P+V T+ L+KG+ +G +EEA+R + +++ + +++ C++G +D
Sbjct: 283 GLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDD 342
Query: 319 AFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
A + V+ +++ L K R+EE +++++
Sbjct: 343 ATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQ 383
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 99/197 (50%), Gaps = 2/197 (1%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
++A +++ M R +S + LL + K ++ L+K+ + G+ +++++N
Sbjct: 445 IDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLAR-GLAKNVITFN 503
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
T+I G + A LL M++ D +T+ TL G+ G+ A + M ++
Sbjct: 504 TVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHL 563
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
P+V +N+ + G I KQ K ++ EM ++ ++P++ T+ ALI G+ EGNL EA
Sbjct: 564 GFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEA 623
Query: 288 -KRWYNKSGCGMNKAIF 303
++ GMN +F
Sbjct: 624 CNLYFEMVNNGMNPNVF 640
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 111/274 (40%), Gaps = 37/274 (13%)
Query: 56 NTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDIS-KEGFTARLIALYGKAAMFENARKV 114
N YT V+ R E +++ K+ DI E +I Y + ++A +V
Sbjct: 287 NVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRV 346
Query: 115 FDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPD------------ 162
+EM + +N ++ + +EV + +++ +G+ PD
Sbjct: 347 RNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEM-EDVGMRPDKYSYNTLIDGYC 405
Query: 163 -----------------------LVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
++YNT++K F ++D A L + M K+G+ + I
Sbjct: 406 REGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEI 465
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
+ +TLL G + G+ A +W+ + + NV ++N ++GL + +A EL+ M
Sbjct: 466 SCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRM 525
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK 293
+ PD T+ L G+ G L A NK
Sbjct: 526 KELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNK 559
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 98/205 (47%), Gaps = 12/205 (5%)
Query: 125 QTVLSFNALLGACVNSKKFDE----VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLD 180
Q +++ + + G +++ + D+ VD + PH V +N II G +
Sbjct: 663 QKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSAN-----VMWNVIIFGLCKSGRIA 717
Query: 181 SANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARL 240
A +L + K D T+++L+ G ++G +A + + M++ + PN+ +YN+ +
Sbjct: 718 DAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLI 777
Query: 241 DGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA---KRWYNKSGCG 297
GL + +A+ L +++SK I+P+ T+ LI + EG EA K+ + G
Sbjct: 778 YGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQ 837
Query: 298 MNKAIFKLLVPFVCEKGDLDFAFNL 322
+ +L+ +C +G ++ A L
Sbjct: 838 PTVITYSILIYGLCTQGYMEEAIKL 862
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 3/168 (1%)
Query: 101 LYGKAAM--FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLG 158
++G AA + A + D M ++++N+L+ S K LF L K G
Sbjct: 742 IHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSK-G 800
Query: 159 IEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAE 218
I P+ ++YNT+I + +G A L +M ++GI+ +IT++ L+ G + G +A
Sbjct: 801 ISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAI 860
Query: 219 KIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINP 266
K+ + M+ NV PN +Y + G ++ +L EM + + P
Sbjct: 861 KLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLP 908
>gi|147828617|emb|CAN73046.1| hypothetical protein VITISV_008668 [Vitis vinifera]
Length = 477
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 130/305 (42%), Gaps = 45/305 (14%)
Query: 100 ALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGI 159
AL + + A ++F EMP R C ++ L+ K E LFK++ K
Sbjct: 164 ALCKNSGTMDAALRIFREMPNRGCPPHSYTYGTLIXGLCRLGKIGEAKELFKEMETK-AC 222
Query: 160 EPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEK 219
P +V+Y ++I LDSA LL EM KGI+ ++ T+++L+ G +G + A +
Sbjct: 223 SPTVVTYXSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALE 282
Query: 220 IWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFV 279
+ + MV+ PN+ +Y+ + GL E + ++A+E++ M+ + + PD + +I GF
Sbjct: 283 LLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFC 342
Query: 280 NEGNLEEAKRWYNK--------------------------------------------SG 295
+ EA + ++ G
Sbjct: 343 DICKFHEAANFLDEMVLGGISPNRLTWSLHVRIHNIVVQGLCTEHPNRAFQLYLSMRTRG 402
Query: 296 CGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAK 355
++ F LV + C KGDL A +L + C+ D+ VV +V E+
Sbjct: 403 ISIDAKTFDSLVNYFCNKGDLHKAAHLVDEMVLDGCIPDEXTWNAVVCAFWDRRKVRESA 462
Query: 356 ELVEL 360
ELV++
Sbjct: 463 ELVQV 467
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 151/343 (44%), Gaps = 38/343 (11%)
Query: 22 KFIGS--VIRGIYKENNLKRLVDKFKKSSD--LGRFRTNTGIYTGTVQRLANAKRFRWIE 77
K IGS V + I E ++++ + F ++ FR + ++ + RL +A FR E
Sbjct: 11 KQIGSAQVAQLIKAERDIQKAIVIFDSATAEYTNGFRHSHQTFSLMISRLVSANHFRLAE 70
Query: 78 EILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGAC 137
E+L K+ K E + YG+ +A +VF +M CE + S+ +
Sbjct: 71 ELLCRMKEEKCNITEDIFLSICRAYGRVHKPLDAVRVFRKMKEYECEPSQKSYITVFAIL 130
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFV-DKGSLDSANTLLYEMEKKGIRL 196
V + ++ + ++GI P + S N +IKA + G++D+A + EM +G
Sbjct: 131 VGENQLKLALRFYRYM-REMGIPPSVASLNVLIKALCKNSGTMDAALRIFREMPNRGCPP 189
Query: 197 DLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELV 256
T+ TL+ G G+ +A+++++ M P V +Y + + GL K A+ L+
Sbjct: 190 HSYTYGTLIXGLCRLGKIGEAKELFKEMETKACSPTVVTYXSLIHGLCQSKDLDSAIRLL 249
Query: 257 GEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKAIFKLLVPFVCEKGDL 316
EM SK I P+VFT+ +L+ G + KSGC
Sbjct: 250 EEMASKGIKPNVFTYSSLMDG-------------HCKSGCSSR----------------- 279
Query: 317 DFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
A L S R L + +V L KE +++EA E+++
Sbjct: 280 --ALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILD 320
>gi|212275340|ref|NP_001130930.1| uncharacterized protein LOC100192035 [Zea mays]
gi|195614146|gb|ACG28903.1| hypothetical protein [Zea mays]
gi|219885707|gb|ACL53228.1| unknown [Zea mays]
gi|413935208|gb|AFW69759.1| hypothetical protein ZEAMMB73_548432 [Zea mays]
Length = 748
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 140/287 (48%), Gaps = 7/287 (2%)
Query: 79 ILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACV 138
+L+ + E A LI+ YG+AA+ + A K+F MP +T LS+NA+L A +
Sbjct: 160 VLDTMPSFSVAPDEPTLAALISAYGRAAIPQEAVKLFRMMPNIGVPRTALSYNAVLKAIL 219
Query: 139 NSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL 198
+ ++ + G+ PD+ +YNT+I F +++A + +M+ G+ D+
Sbjct: 220 CRGREAMARRIYNAMIAD-GVAPDVSTYNTLIWGFGLCKKMETAVRVFGDMKGHGVTPDV 278
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
T+NTLL + G A K+++ M N SYN + G + ++A+ L E
Sbjct: 279 TTYNTLLNAWVRAGDLESARKVFDEMAGEGTERNSVSYNVMIKGYVEGNRVEEAVALFAE 338
Query: 259 MRSKEINPDVFTFYALIKGFV-NEGNLEEAKRWYNKSG----CGMNKAIFKLLVPFVCEK 313
M K + TF AL+ G ++G + EA++ + +K++F LV +C+
Sbjct: 339 MAEKGLRLSEKTFAALMPGLCDDQGRVAEARKAVDDMAERRLTPKDKSVFLRLVTTLCKA 398
Query: 314 GDLDFAFNLCKRTFS-ERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
GDLD A + ++ + LVD ++++ L + E A E+++
Sbjct: 399 GDLDGALEVHWKSGQFKHVLVDPRQYGVLMEGLCAGGKCETAIEVLD 445
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 78/165 (47%)
Query: 129 SFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
+F L+ A + + + L D + PD + +I A+ A L
Sbjct: 139 TFALLVPALASRRMLNHARCLVLDTMPSFSVAPDEPTLAALISAYGRAAIPQEAVKLFRM 198
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
M G+ +++N +L GR A A +I+ M+ V P+V +YN + G + K+
Sbjct: 199 MPNIGVPRTALSYNAVLKAILCRGREAMARRIYNAMIADGVAPDVSTYNTLIWGFGLCKK 258
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK 293
+ A+ + G+M+ + PDV T+ L+ +V G+LE A++ +++
Sbjct: 259 METAVRVFGDMKGHGVTPDVTTYNTLLNAWVRAGDLESARKVFDE 303
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 4/168 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+ + +A E+ARKVFDEM G E+ +S+N ++ V + +E LF ++ K
Sbjct: 284 LLNAWVRAGDLESARKVFDEMAGEGTERNSVSYNVMIKGYVEGNRVEEAVALFAEMAEK- 342
Query: 158 GIEPDLVSYNTIIKAFV-DKGSLDSANTLLYEM-EKKGIRLDLITFNTLLLGFYSNGRFA 215
G+ ++ ++ D+G + A + +M E++ D F L+ G
Sbjct: 343 GLRLSEKTFAALMPGLCDDQGRVAEARKAVDDMAERRLTPKDKSVFLRLVTTLCKAGDLD 402
Query: 216 DAEKI-WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
A ++ W++ +V + R Y ++GL + + A+E++ E+ K
Sbjct: 403 GALEVHWKSGQFKHVLVDPRQYGVLMEGLCAGGKCETAIEVLDELMEK 450
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 32/153 (20%), Positives = 74/153 (48%), Gaps = 4/153 (2%)
Query: 110 NARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTI 169
+A+ D M + + F +++ A N + + K + K G+ ++ + I
Sbjct: 550 DAKTALDSMMQQGHLPSPALFKSVMEALFNDGRVQTASRVMKSMIEK-GVTENMDVAHKI 608
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
++A +G ++ A + M + G DL + LL+G NGR +A+K+ + ++ +
Sbjct: 609 LEALFTRGHVEEAIGRVNLMVENGCMPDL---DKLLVGLCDNGRVMEAQKLADFALDRDF 665
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
+ +Y+ L+ L E++T A ++ ++++K
Sbjct: 666 DVSFSTYDRVLEALYAEEKTLPAYSMLCKIKNK 698
>gi|410109883|gb|AFV61021.1| pentatricopeptide repeat-containing protein 11, partial
[Burroughsia fastigiata]
Length = 431
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 129/268 (48%), Gaps = 8/268 (2%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A+ VFD + +V+S+N L+ + DE L K H G+ PD+ +Y+ +I
Sbjct: 161 AQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFKL-KSAMHASGVXPDVYTYSVLI 219
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
+ +D AN L EM KG+ + +TF TL+ G NGR A +I++ M++ ++
Sbjct: 220 NGLCKESKMDXANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLL 279
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLE---EA 287
P++ +YN + GL + +A +L+ EM K + PD T+ LI G EG+L+ E
Sbjct: 280 PDLITYNTLIYGLCKKGDLNQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEH 339
Query: 288 KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAK 347
++ + ++ + L+ +C++G A + + S D ++++ + K
Sbjct: 340 RKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREMLSVGLKPDTGTYTMIINEVCK 399
Query: 348 ELRVEEA----KELVELGKTNSYCRYNL 371
+ V + KE+ G S YN+
Sbjct: 400 KGDVGKGSKLLKEMQXDGHAPSVVTYNV 427
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 90/180 (50%), Gaps = 1/180 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K + A +++ +M ++ ++++N L+ ++ L ++ K
Sbjct: 253 LIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHDLIDEMSMK- 311
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD ++Y T+I +G LD+A M ++ IRLD + + L+ G GR DA
Sbjct: 312 GLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDA 371
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
EK+ M+++ ++P+ +Y ++ + + K +L+ EM+ P V T+ L+ G
Sbjct: 372 EKMMREMLSVGLKPDTGTYTMIINEVCKKGDVGKGSKLLKEMQXDGHAPSVVTYNVLMNG 431
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 110/256 (42%), Gaps = 39/256 (15%)
Query: 141 KKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLIT 200
K F V G +++ + G L +N + F +G + A ++ + K G+R +++
Sbjct: 121 KYFKLVWGFYEEFL-ECGYPASLYFFNILXHRFCKEGDIRVAQSVFDAITKWGLRPSVVS 179
Query: 201 FNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKK--------- 251
+NTL+ G+ G + K+ M V P+V +Y+ ++GL E +
Sbjct: 180 YNTLMNGYIRLGDLDEGFKLKSAMHASGVXPDVYTYSVLINGLCKESKMDXANELFDEML 239
Query: 252 --------------------------ALELVGEMRSKEINPDVFTFYALIKGFVNEGNLE 285
A+E+ +M S+ + PD+ T+ LI G +G+L
Sbjct: 240 VKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLN 299
Query: 286 EAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVV 342
+A ++ G +K + L+ C++GDLD AF KR E +D ++
Sbjct: 300 QAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALI 359
Query: 343 DRLAKELRVEEAKELV 358
L +E R +A++++
Sbjct: 360 SGLCQEGRSVDAEKMM 375
>gi|115475535|ref|NP_001061364.1| Os08g0248400 [Oryza sativa Japonica Group]
gi|113623333|dbj|BAF23278.1| Os08g0248400, partial [Oryza sativa Japonica Group]
Length = 440
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 122/238 (51%), Gaps = 4/238 (1%)
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL 179
G +C V+S++ ++ D+ + ++ + GI PD+V+YNTI+ A ++
Sbjct: 199 GGDCPPDVVSYSTIIDGLFKEGDSDKAYSTYHEMLER-GILPDVVTYNTIVAALCKAQAM 257
Query: 180 DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNAR 239
D A +L M K G+ D IT+N+++ G+ S+G+ +A I E M + V P+ +Y +
Sbjct: 258 DKAMDVLNRMVKNGVMPDCITYNSIVHGYCSSGQSKEAIGILEKMCSDGVEPDAVTYTSL 317
Query: 240 LDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGC 296
+D L + +A +++ M + + P+V T+ L+ G+ +G L E + + ++G
Sbjct: 318 MDYLCKNGRCIEARKILDSMIKRGLKPNVITYSTLLHGYATKGALVEMRDLLDLMVRNGI 377
Query: 297 GMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA 354
++ +F +L+ + ++D A + + +R D ++D L K RV++A
Sbjct: 378 QPDRHVFSILICACTKHQNVDVAMFVFSKMRQQRLTPDVVTYGTLIDGLCKSGRVDDA 435
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 93/207 (44%), Gaps = 6/207 (2%)
Query: 159 IEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAE 218
+ P L +Y +I G LD L + KKG R++ I F LL + R ++A
Sbjct: 94 VTPTLHTYGILIGCCCRAGRLDLGFAGLGNVIKKGYRVEPIIFTPLLKSLCAEKRTSNAM 153
Query: 219 KI-WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK--EINPDVFTFYALI 275
I M + P+V SYN L GL E ++++ALEL+ M + PDV ++ +I
Sbjct: 154 NIVLRRMTELGCAPHVFSYNILLKGLCHESRSQEALELLHMMADDGGDCPPDVVSYSTII 213
Query: 276 KGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCL 332
G EG+ ++A Y+ + G + + +V +C+ +D A ++ R +
Sbjct: 214 DGLFKEGDSDKAYSTYHEMLERGILPDVVTYNTIVAALCKAQAMDKAMDVLNRMVKNGVM 273
Query: 333 VDQAPLQLVVDRLAKELRVEEAKELVE 359
D +V + +EA ++E
Sbjct: 274 PDCITYNSIVHGYCSSGQSKEAIGILE 300
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 55/107 (51%), Gaps = 1/107 (0%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
ARK+ D M R + V++++ LL E+ L DL + GI+PD ++ +I
Sbjct: 330 ARKILDSMIKRGLKPNVITYSTLLHGYATKGALVEMRDLL-DLMVRNGIQPDRHVFSILI 388
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
A ++D A + +M ++ + D++T+ TL+ G +GR DA
Sbjct: 389 CACTKHQNVDVAMFVFSKMRQQRLTPDVVTYGTLIDGLCKSGRVDDA 435
>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 920
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 124/254 (48%), Gaps = 3/254 (1%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
E+AR++ + + + V+++ L+ + +E + + K++ I D V+Y
Sbjct: 270 EDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGM 329
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
+I + +G +D A + EM GI ++L +NT++ G GR + +K+ + M ++
Sbjct: 330 MINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVG 389
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
+RP+ SYN +DG E +KA E+ M + T+ L+KGF + +++A
Sbjct: 390 MRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDAL 449
Query: 289 R-WY--NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRL 345
R W+ K G N+ L+ + + G + A NL K T + + V++ L
Sbjct: 450 RLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGL 509
Query: 346 AKELRVEEAKELVE 359
K R+ EA+EL++
Sbjct: 510 CKIGRMAEAEELLD 523
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 129/281 (45%), Gaps = 18/281 (6%)
Query: 96 ARLIALYGKAAMFENARKVFDEMPG-------------RNCEQTVLSFNALLGACVNSKK 142
A+L+ + +A F +AR + +P R+ + +SF+ LL A ++ +
Sbjct: 104 AQLLHILARARRFHDARALLSSLPPHAEPLFPHLAEVYRDFTFSAVSFDLLLRAHADAGQ 163
Query: 143 FDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFN 202
+F + K+G P L S N ++ V G A + +M G+ D T
Sbjct: 164 LSSALNVFDGMG-KVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVA 222
Query: 203 TLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
+ + +GR A A + E M M + N+ +Y+A +D T+ A ++ ++ K
Sbjct: 223 IMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRK 282
Query: 263 EINPDVFTFYALIKGFVNEGNLEEAKRWYNK----SGCGMNKAIFKLLVPFVCEKGDLDF 318
++P+V T+ L+KG+ +G +EEA+R + +++ + +++ C++G +D
Sbjct: 283 GLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDD 342
Query: 319 AFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
A + V+ +++ L K R+EE +++++
Sbjct: 343 ATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQ 383
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 99/197 (50%), Gaps = 2/197 (1%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
++A +++ M R +S + LL + K ++ L+K+ + G+ +++++N
Sbjct: 445 IDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLAR-GLAKNVITFN 503
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
T+I G + A LL M++ D +T+ TL G+ G+ A + M ++
Sbjct: 504 TVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHL 563
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
P+V +N+ + G I KQ K ++ EM ++ ++P++ T+ ALI G+ EGNL EA
Sbjct: 564 GFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEA 623
Query: 288 -KRWYNKSGCGMNKAIF 303
++ GMN +F
Sbjct: 624 CNLYFEMVNNGMNPNVF 640
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 94/190 (49%), Gaps = 20/190 (10%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K+ +A+ +F+ + + ++++L+ C S DE L +D+ G+ P++
Sbjct: 712 KSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSL-RDVMLSAGLTPNI 770
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
++YN++I G L A L +++ KGI + IT+NTL+ + G+ +A K+ +
Sbjct: 771 ITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQK 830
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
MV E ++A++L+ +M ++P+ T+ LI G++ GN
Sbjct: 831 MVE-------------------EGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGN 871
Query: 284 LEEAKRWYNK 293
+EE + Y++
Sbjct: 872 MEEISKLYDE 881
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 1/184 (0%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
KA E A ++ E R + V++FN ++ + E + L D +L PD
Sbjct: 476 KAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELL-DRMKELRCPPDS 534
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
++Y T+ + G L +A L+ +ME G + FN+ + G + ++ I
Sbjct: 535 LTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSE 594
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M + PN+ +Y A + G E +A L EM + +NP+VF AL+ F EG
Sbjct: 595 MSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGK 654
Query: 284 LEEA 287
++EA
Sbjct: 655 VDEA 658
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 106/254 (41%), Gaps = 30/254 (11%)
Query: 105 AAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLV 164
A + + EM R ++++ AL+ E L+ ++ + G+ P++
Sbjct: 582 AKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNN-GMNPNVF 640
Query: 165 SYNTIIKAFVDKGSLDSANTLL----------------YEMEKKGIRLDLIT-------- 200
+ ++ F +G +D AN +L E++K +D I
Sbjct: 641 ICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSAN 700
Query: 201 --FNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
+N ++ G +GR ADA+ ++E++ N P+ +Y++ + G A +A L
Sbjct: 701 VMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDV 760
Query: 259 MRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGD 315
M S + P++ T+ +LI G G L A +NK G N + L+ C++G
Sbjct: 761 MLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGK 820
Query: 316 LDFAFNLCKRTFSE 329
AF L ++ E
Sbjct: 821 TTEAFKLKQKMVEE 834
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 111/274 (40%), Gaps = 37/274 (13%)
Query: 56 NTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDIS-KEGFTARLIALYGKAAMFENARKV 114
N YT V+ R E +++ K+ DI E +I Y + ++A +V
Sbjct: 287 NVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRV 346
Query: 115 FDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPD------------ 162
+EM + +N ++ + +EV + +++ +G+ PD
Sbjct: 347 RNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEM-EDVGMRPDKYSYNTLIDGYC 405
Query: 163 -----------------------LVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
++YNT++K F ++D A L + M K+G+ + I
Sbjct: 406 REGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEI 465
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
+ +TLL G + G+ A +W+ + + NV ++N ++GL + +A EL+ M
Sbjct: 466 SCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRM 525
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK 293
+ PD T+ L G+ G L A NK
Sbjct: 526 KELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNK 559
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 66/142 (46%), Gaps = 19/142 (13%)
Query: 101 LYGKAAM--FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLG 158
++G AA + A + D M ++++N+L+ S K LF L K G
Sbjct: 742 IHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSK-G 800
Query: 159 IEPDLVSYNTIIKAF----------------VDKGSLDSANTLLYEMEKKGIRLDLITFN 202
I P+ ++YNT+I + V++G ++ A LL +M + + + IT+
Sbjct: 801 ISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGYMEEAIKLLDQMIENNVDPNYITYC 860
Query: 203 TLLLGFYSNGRFADAEKIWETM 224
TL+ G+ +G + K+++ M
Sbjct: 861 TLIHGYIKSGNMEEISKLYDEM 882
>gi|356526063|ref|XP_003531639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like isoform 1 [Glycine max]
gi|356526065|ref|XP_003531640.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like isoform 2 [Glycine max]
Length = 522
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 152/331 (45%), Gaps = 36/331 (10%)
Query: 44 FKKSSDLGRFRTNTGIYT--------GTVQR----LANAKRFRWIEEILEHQKQYKD--- 88
FK + +FR T IYT TVQ L++ R R + L ++ +
Sbjct: 161 FKTLAHTNKFRHATHIYTLMKEHGFSPTVQSCNAFLSSLLRLRRADIALAFYREIRRRSC 220
Query: 89 ISKEGFTARLIALYGKAAMFENARKVFD---EMPGRNCEQTVLSFNALLGACVNSKKFDE 145
+S +T +I M +K FD +M V+SFN L+ N F
Sbjct: 221 VSPNVYTLNMI--IRAYCMLGEVQKGFDMLEKMMDMGLSPNVVSFNTLISGYCNKGLF-- 276
Query: 146 VDGL---FKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFN 202
GL K L + G++P++V++NT+I F + L AN + EM+ + ++T+N
Sbjct: 277 --GLALKVKSLMVENGVQPNVVTFNTLINGFCKERKLHEANRVFNEMKVANVDPSVVTYN 334
Query: 203 TLLLGFYSNGRFADAE---KIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
TLL G+ G+ D+E +++E M+ ++ ++ +YNA + GL + +TKKA V E+
Sbjct: 335 TLLNGY---GQVGDSEMGVRVYEEMMRNGLKADILTYNALILGLCKDGKTKKAAGFVREL 391
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDL 316
+ + P+ TF ALI G N E A Y +SGC N F++L+ C+ D
Sbjct: 392 DKENLVPNASTFSALITGQCVRNNSERAFLIYRSMVRSGCSPNGQTFQMLISAFCKNEDF 451
Query: 317 DFAFNLCKRTFSERCLVDQAPLQLVVDRLAK 347
D A + + D + + + D L +
Sbjct: 452 DGAVQVLRDMLGRLMSPDLSTMSELCDGLCR 482
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 85/185 (45%), Gaps = 1/185 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K A +VF+EM N + +V+++N LL + +++++ +
Sbjct: 301 LINGFCKERKLHEANRVFNEMKVANVDPSVVTYNTLLNGYGQVGDSEMGVRVYEEM-MRN 359
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++ D+++YN +I G A + E++K+ + + TF+ L+ G A
Sbjct: 360 GLKADILTYNALILGLCKDGKTKKAAGFVRELDKENLVPNASTFSALITGQCVRNNSERA 419
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
I+ +MV PN +++ + + A++++ +M + ++PD+ T L G
Sbjct: 420 FLIYRSMVRSGCSPNGQTFQMLISAFCKNEDFDGAVQVLRDMLGRLMSPDLSTMSELCDG 479
Query: 278 FVNEG 282
G
Sbjct: 480 LCRCG 484
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 64/163 (39%), Gaps = 4/163 (2%)
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
+ F++L +F A I+ M P V+S NA L L ++ AL E
Sbjct: 155 LVFDSLFKTLAHTNKFRHATHIYTLMKEHGFSPTVQSCNAFLSSLLRLRRADIALAFYRE 214
Query: 259 MRSKE-INPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKG 314
+R + ++P+V+T +I+ + G +++ K G N F L+ C KG
Sbjct: 215 IRRRSCVSPNVYTLNMIIRAYCMLGEVQKGFDMLEKMMDMGLSPNVVSFNTLISGYCNKG 274
Query: 315 DLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
A + + +++ KE ++ EA +
Sbjct: 275 LFGLALKVKSLMVENGVQPNVVTFNTLINGFCKERKLHEANRV 317
>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Vitis vinifera]
Length = 778
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 119/264 (45%), Gaps = 4/264 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI Y KA A + DEM +N + ++ N +L KK +E L K
Sbjct: 424 LINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSS-ARKR 482
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G D VSY T+I + G++D A L EM++K I +T+N ++ G G+ A
Sbjct: 483 GYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQA 542
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ + P+ +YN L G E +KA + +M PDVFT L++G
Sbjct: 543 ISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRG 602
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
EG LE+A + +N G ++ + L+ +C++G LD AFNL + D
Sbjct: 603 LCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPD 662
Query: 335 QAPLQLVVDRLAKELRVEEAKELV 358
++ L R+ EA+E +
Sbjct: 663 HYTYNAIITALTDSGRIREAEEFM 686
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 117/231 (50%), Gaps = 10/231 (4%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTI 169
+R+ F++ V +FN ++ G C+ +K D V+ F ++ K PD V+YNTI
Sbjct: 192 SREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVE--FLNVMGKYNCSPDNVTYNTI 249
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
+ KG L A LL +M+ +G+ + T+N L+ G+ G +A + E M N+
Sbjct: 250 LDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNL 309
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
P+V +YN ++GL E + ++A +L EM + ++ PDV ++ LI G + + EA +
Sbjct: 310 LPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFK 369
Query: 290 W---YNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRT----FSERCLV 333
++ G N ++V + C++G +D A N + FS C+
Sbjct: 370 LLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVT 420
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 141/297 (47%), Gaps = 18/297 (6%)
Query: 70 AKRFRWIEEILEHQKQYKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVL 128
++ F+ +EE+ E K + T ++ Y K ++A +M +
Sbjct: 365 SEAFKLLEEMSE-----KGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCV 419
Query: 129 SFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
++N L+ + E ++ K ++ D V+ NTI++ + L+ A LL
Sbjct: 420 TYNTLINGYCKAGNMGEAFRTMDEMGRK-NMKMDSVTLNTILRTLCREKKLEEAYKLLSS 478
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
K+G +D +++ TL++G++ +G A K+W+ M + P+ +YN + GL +
Sbjct: 479 ARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGK 538
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKAIFK---- 304
T++A+ + E+ + PD T+ ++ G+ EG++E+A +++NK M + FK
Sbjct: 539 TEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNK----MVENSFKPDVF 594
Query: 305 ---LLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
+L+ +C +G L+ A L S+ +D ++ L KE R+++A L+
Sbjct: 595 TCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLL 651
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 122/270 (45%), Gaps = 6/270 (2%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGR--FRTNTGIYTGTVQRLANAKRFRWIEEILEHQ 83
++I G K N+ + F+ ++GR + ++ ++ L K+ ++L
Sbjct: 423 TLINGYCKAGNMG---EAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSA 479
Query: 84 KQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKF 143
++ E LI Y K + A K++DEM + + +++N ++G K
Sbjct: 480 RKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKT 539
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT 203
++ +L G+ PD +YNTI+ + +G ++ A +M + + D+ T N
Sbjct: 540 EQAISKLNELLES-GLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNI 598
Query: 204 LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
LL G G A K++ T V+ + +YN + L E + A L+ EM KE
Sbjct: 599 LLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKE 658
Query: 264 INPDVFTFYALIKGFVNEGNLEEAKRWYNK 293
+ PD +T+ A+I + G + EA+ + +K
Sbjct: 659 LGPDHYTYNAIITALTDSGRIREAEEFMSK 688
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 95/203 (46%), Gaps = 6/203 (2%)
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL---LGFYSNGRFADA 217
P +T I A+V G A + +M++ +R +L+T NTLL + + S+ + +
Sbjct: 133 PSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFS 192
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ + + + + PNV ++N + G +E + K A+E + M +PD T+ ++
Sbjct: 193 REAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDT 252
Query: 278 FVNEGNLEEAKRW---YNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
+G L +A+ G N+ + +LV C+ G L A N+ + L D
Sbjct: 253 LCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPD 312
Query: 335 QAPLQLVVDRLAKELRVEEAKEL 357
++++ L E R+EEA +L
Sbjct: 313 VWTYNMLINGLCNEGRIEEAFKL 335
>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
Length = 670
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 101/425 (23%), Positives = 176/425 (41%), Gaps = 58/425 (13%)
Query: 2 SFPSRLLSCSF----------STTATATGPKFIGSVIRGIYKENNLKR---LVDK-FKKS 47
SFPS+ LS S ST T P +EN ++ + DK FK
Sbjct: 21 SFPSKFLSLSMHSNFSAHAIPSTKTIETEPLNHTQHCNTTDQENGIEPDPPISDKIFKSG 80
Query: 48 SDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAM 107
+G +R + + AN F+ +E++L+ K K + E + YGKA +
Sbjct: 81 PKMGSYRLGDSTFYSLINNYANLGDFKSLEKVLDRMKCEKRVIFEKCFIVIFKAYGKAHL 140
Query: 108 FENARKVFDEMPGR-NCEQTVLSFNALLGACVNSKKF----------------------- 143
E A +FD M C++T SFN++L + F
Sbjct: 141 PEKAVDLFDRMACEFECKRTGKSFNSVLNVIIQEGLFHRALEFYNHVIGAKGVSISPNVL 200
Query: 144 ---------------DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
D+ +F+D+ + EPD+ +Y T++ +D A +LL E
Sbjct: 201 TFNLVIKAMCKVGLVDDAIQVFRDMTIR-KCEPDVYTYCTLMDGLCKADRIDEAVSLLDE 259
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
M+ G +TFN L+ G G + A K+ + M PN +YN + GL ++ +
Sbjct: 260 MQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGK 319
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK---RWYNKSGCGMNKAIFKL 305
+KA+ L+ M S + P+V T+ +I G V +G + + G +N+ ++
Sbjct: 320 LEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYVYST 379
Query: 306 LVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKTNS 365
L+ + ++G A +L K + ++ V+D L ++ + ++A E++ TN
Sbjct: 380 LISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLS-EMTNK 438
Query: 366 YCRYN 370
C N
Sbjct: 439 GCTPN 443
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 122/251 (48%), Gaps = 6/251 (2%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTI 169
A K+ D M + C +++N L+ G C+ K + L + + K P++V+Y TI
Sbjct: 288 AAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSK--CVPNVVTYGTI 345
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
I V +G +L ME++G ++ ++TL+ G + G+ +A +++ M
Sbjct: 346 INGLVKQGRALDGACVLALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGY 405
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA-K 288
N Y+A +DGL + + A+E++ EM +K P+ +T +L+KGF GN A +
Sbjct: 406 ELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVE 465
Query: 289 RWYN--KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLA 346
W + K N+ + +L+ +C+ G + A + + + C D +++ L+
Sbjct: 466 VWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLS 525
Query: 347 KELRVEEAKEL 357
VE+A +L
Sbjct: 526 IAGLVEDAMQL 536
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 101/225 (44%), Gaps = 6/225 (2%)
Query: 130 FNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEM 189
++ L+ K E LFK++ K G E + + Y+ +I G D A +L EM
Sbjct: 377 YSTLISGLFKEGKSQEAMHLFKEMTVK-GYELNTIVYSAVIDGLCRDGKPDDAVEVLSEM 435
Query: 190 EKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQT 249
KG + T ++L+ GF+ G A ++W+ M N N Y+ + GL + +
Sbjct: 436 TNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKV 495
Query: 250 KKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGC-----GMNKAIFK 304
K+A+ + +M K PDV + ++I G G +E+A + YN+ C + +
Sbjct: 496 KEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTYN 555
Query: 305 LLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKEL 349
+L+ +C++ + A +L C D + + L ++L
Sbjct: 556 ILLNTLCKQSSISRAIDLLNSMLDRGCDPDLVTCTIFLRMLREKL 600
>gi|194690470|gb|ACF79319.1| unknown [Zea mays]
Length = 671
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 140/287 (48%), Gaps = 7/287 (2%)
Query: 79 ILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACV 138
+L+ + E A LI+ YG+AA+ + A K+F MP +T LS+NA+L A +
Sbjct: 83 VLDTMPSFSVAPDEPTLAALISAYGRAAIPQEAVKLFRMMPNIGVPRTALSYNAVLKAIL 142
Query: 139 NSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL 198
+ ++ + G+ PD+ +YNT+I F +++A + +M+ G+ D+
Sbjct: 143 CRGREAMARRIYNAMIAD-GVAPDVSTYNTLIWGFGLCKKMETAVRVFGDMKGHGVTPDV 201
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
T+NTLL + G A K+++ M N SYN + G + ++A+ L E
Sbjct: 202 TTYNTLLNAWVRAGDLESARKVFDEMAGEGTERNSVSYNVMIKGYVEGNRVEEAVALFAE 261
Query: 259 MRSKEINPDVFTFYALIKGFV-NEGNLEEAKRWYNKSG----CGMNKAIFKLLVPFVCEK 313
M K + TF AL+ G ++G + EA++ + +K++F LV +C+
Sbjct: 262 MAEKGLRLSEKTFAALMPGLCDDQGRVAEARKAVDDMAERRLTPKDKSVFLRLVTTLCKA 321
Query: 314 GDLDFAFNLCKRTFS-ERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
GDLD A + ++ + LVD ++++ L + E A E+++
Sbjct: 322 GDLDGALEVHWKSGQFKHVLVDPRQYGVLMEGLCAGGKCETAIEVLD 368
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 78/165 (47%)
Query: 129 SFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
+F L+ A + + + L D + PD + +I A+ A L
Sbjct: 62 TFALLVPALASRRMLNHARCLVLDTMPSFSVAPDEPTLAALISAYGRAAIPQEAVKLFRM 121
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
M G+ +++N +L GR A A +I+ M+ V P+V +YN + G + K+
Sbjct: 122 MPNIGVPRTALSYNAVLKAILCRGREAMARRIYNAMIADGVAPDVSTYNTLIWGFGLCKK 181
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK 293
+ A+ + G+M+ + PDV T+ L+ +V G+LE A++ +++
Sbjct: 182 METAVRVFGDMKGHGVTPDVTTYNTLLNAWVRAGDLESARKVFDE 226
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 4/168 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+ + +A E+ARKVFDEM G E+ +S+N ++ V + +E LF ++ K
Sbjct: 207 LLNAWVRAGDLESARKVFDEMAGEGTERNSVSYNVMIKGYVEGNRVEEAVALFAEMAEK- 265
Query: 158 GIEPDLVSYNTIIKAFV-DKGSLDSANTLLYEM-EKKGIRLDLITFNTLLLGFYSNGRFA 215
G+ ++ ++ D+G + A + +M E++ D F L+ G
Sbjct: 266 GLRLSEKTFAALMPGLCDDQGRVAEARKAVDDMAERRLTPKDKSVFLRLVTTLCKAGDLD 325
Query: 216 DAEKI-WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
A ++ W++ +V + R Y ++GL + + A+E++ E+ K
Sbjct: 326 GALEVHWKSGQFKHVLVDPRQYGVLMEGLCAGGKCETAIEVLDELMEK 373
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 32/153 (20%), Positives = 74/153 (48%), Gaps = 4/153 (2%)
Query: 110 NARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTI 169
+A+ D M + + F +++ A N + + K + K G+ ++ + I
Sbjct: 473 DAKTALDSMMQQGHLPSPALFKSVMEALFNDGRVQTASRVMKSMIEK-GVTENMDVAHKI 531
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
++A +G ++ A + M + G DL + LL+G NGR +A+K+ + ++ +
Sbjct: 532 LEALFTRGHVEEAIGRVNLMVENGCMPDL---DKLLVGLCDNGRVMEAQKLADFALDRDF 588
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
+ +Y+ L+ L E++T A ++ ++++K
Sbjct: 589 DVSFSTYDRVLEALYAEEKTLPAYSMLCKIKNK 621
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 103/230 (44%), Gaps = 4/230 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I L + A + F EM + + + L+ F ++ H
Sbjct: 765 IIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEM-HSR 823
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
I PD+++Y II F G + A L +EM KG+ D +TF L+ G+ G DA
Sbjct: 824 DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDA 883
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ M+ PNV +Y +DGL E A EL+ EM + P++FT+ +++ G
Sbjct: 884 FRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNG 943
Query: 278 FVNEGNLEEAKRW---YNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCK 324
GN+EEA + + +G + + L+ C+ G++D A + K
Sbjct: 944 LCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILK 993
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 128/281 (45%), Gaps = 16/281 (5%)
Query: 56 NTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFT-ARLIALYGKAAMFENARKV 114
+T +YT + R + ++ +DI+ + T +I+ + + A K+
Sbjct: 793 DTVVYTTLIDGFCKRGDIRAASKFF-YEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 851
Query: 115 FDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKL--GIEPDLVSYNTIIK 171
F EM + E ++F L+ G C K + F+ H + G P++V+Y T+I
Sbjct: 852 FHEMFCKGLEPDSVTFTELINGYC----KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLID 907
Query: 172 AFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRP 231
+G LDSAN LL+EM K G++ ++ T+N+++ G +G +A K+ +
Sbjct: 908 GLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNA 967
Query: 232 NVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR-- 289
+ +Y +D + KA E++ EM K + P + TF L+ GF G LE+ ++
Sbjct: 968 DTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLL 1027
Query: 290 -WYNKSGCGMNKAIFKLLVPFVCEKGDLDFAF----NLCKR 325
W G N F LV C + +L A ++C R
Sbjct: 1028 NWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSR 1068
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 118/238 (49%), Gaps = 10/238 (4%)
Query: 127 VLSFNALL-GACVNSKKFDEVDGLFK--DLPHKLGIEPDLVSYNTIIKAFVDKGSLDSAN 183
V+S++ ++ G C +F E+D ++K ++ + G++P+ Y +II L A
Sbjct: 724 VISYSTVVNGYC----RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAE 779
Query: 184 TLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
EM ++GI D + + TL+ GF G A K + M + ++ P+V +Y A + G
Sbjct: 780 EAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGF 839
Query: 244 AIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNK 300
+A +L EM K + PD TF LI G+ G++++A R +N ++GC N
Sbjct: 840 CQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNV 899
Query: 301 AIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
+ L+ +C++GDLD A L + + +V+ L K +EEA +LV
Sbjct: 900 VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV 957
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 107/248 (43%), Gaps = 39/248 (15%)
Query: 80 LEHQKQYKDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACV 138
L H+ K + + T LI Y KA ++A +V + M C V+++ L+
Sbjct: 851 LFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLC 910
Query: 139 NSKKFDEVDGLFKDLPHKLGIEP-----------------------------------DL 163
D + L ++ K+G++P D
Sbjct: 911 KEGDLDSANELLHEM-WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT 969
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
V+Y T++ A+ G +D A +L EM KG++ ++TFN L+ GF +G D EK+
Sbjct: 970 VTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 1029
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M+ + PN ++N+ + I K A + +M S+ + PD T+ L+KG N
Sbjct: 1030 MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARN 1089
Query: 284 LEEAKRWY 291
++EA W+
Sbjct: 1090 MKEA--WF 1095
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 115/256 (44%), Gaps = 11/256 (4%)
Query: 106 AMFENARKVFDEMPGRNCEQTVLSFNALLGACV-NSKKFDEVDGLFKDLPHKLGIEPDLV 164
+ AR+VF++M +V S N L + K +F++ P ++G+ ++
Sbjct: 632 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFP-EVGVCWNVA 690
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW--- 221
SYN +I G + A+ LL ME KG D+I+++T++ G+ RF + +K+W
Sbjct: 691 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGY---CRFGELDKVWKLI 747
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
E M ++PN Y + + L + +A E EM + I PD + LI GF
Sbjct: 748 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 807
Query: 282 GNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPL 338
G++ A +++ + + + ++ C+ GD+ A L F + D
Sbjct: 808 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 867
Query: 339 QLVVDRLAKELRVEEA 354
+++ K +++A
Sbjct: 868 TELINGYCKAGHMKDA 883
>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
Length = 564
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 126/252 (50%), Gaps = 4/252 (1%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A +FDEM R E V+++N L+G ++ E + L D K + P+L++YNT+I
Sbjct: 286 AFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLV-DQMKKAAVSPNLITYNTLI 344
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
F D G+LD A++LL +++ G+ L+T+N L+ G+ G + + M +
Sbjct: 345 GGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGIS 404
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
P+ + +D ++ +KA ++ M + PDV+ + LI G +GN++E+ +
Sbjct: 405 PSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKL 464
Query: 291 YNKSG---CGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAK 347
+ G + I+ ++ C++ + A L + ++ + + A ++ L K
Sbjct: 465 FRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCK 524
Query: 348 ELRVEEAKELVE 359
+ + EEA+ L++
Sbjct: 525 DGKWEEAEVLLD 536
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 105/221 (47%), Gaps = 11/221 (4%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD---EVDGLFKDLPHKLGIEPDLV 164
FE A F+E+ R + V SF ++ C + D ++ GL +D+ G+ P++V
Sbjct: 144 FEKAWLFFNELKER-VKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDM----GLSPNVV 198
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
Y T+I G ++ A +M + G+ + TF L+ G + G D ++E M
Sbjct: 199 IYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKM 258
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
+ PN+ +YN ++ E + +A +L EMR + + +V T+ LI G E +
Sbjct: 259 KINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERV 318
Query: 285 EEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
EA++ + K+ N + L+ C+ G+LD A +L
Sbjct: 319 WEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSL 359
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 90/179 (50%), Gaps = 7/179 (3%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL---GIEPDLV 164
E AR FD+M +F L+ KK + DG DL K+ G+ P+L
Sbjct: 213 IERARLFFDKMGEMGLVANQYTFTVLINGLF--KKGLKKDGF--DLFEKMKINGLFPNLY 268
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
+YN ++ + +G + A L EM ++G+ +++T+NTL+ G R +AEK+ + M
Sbjct: 269 TYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQM 328
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
V PN+ +YN + G KA L+ +++S ++P + T+ LI+G+ GN
Sbjct: 329 KKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGN 387
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 108/245 (44%), Gaps = 10/245 (4%)
Query: 26 SVIRGIYKENNL---KRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEH 82
++I G+ +E + ++LVD+ KK++ N Y + + +L+
Sbjct: 307 TLIGGMCREERVWEAEKLVDQMKKAA----VSPNLITYNTLIGGFCDVGNLDKASSLLDQ 362
Query: 83 QKQYKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSK 141
K +S T LI Y KA ++ + EM GR + ++ L+ A V +
Sbjct: 363 LKS-NGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQ 421
Query: 142 KFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITF 201
+ ++ ++ + K G+ PD+ Y +I KG++ ++ L M + + + +
Sbjct: 422 EMEKAFQIYSSM-EKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIY 480
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS 261
NT++ G+ A ++ M + PNV SY++ + L + + ++A L+ +M
Sbjct: 481 NTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIE 540
Query: 262 KEINP 266
++ P
Sbjct: 541 LQLKP 545
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 100/227 (44%), Gaps = 12/227 (5%)
Query: 17 TATGPKFI--GSVIRGIYKENNLKR---LVDKFKKSSDLGRFRTNTGIYTGTVQRLANAK 71
A P I ++I G NL + L+D+ K + + Y ++ + A
Sbjct: 331 AAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNG----LSPSLVTYNILIEGYSKAG 386
Query: 72 RFRWIEEILEHQKQYKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSF 130
++ + + L + + + IS T LI Y + E A +++ M V +
Sbjct: 387 NWKGVAD-LAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVY 445
Query: 131 NALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEME 190
L+ E LF+ + ++ +EP V YNT+I + + + A LL EME
Sbjct: 446 GVLIHGLCMKGNMKESSKLFRSMG-EMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREME 504
Query: 191 KKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYN 237
KG+ ++ ++++++ +G++ +AE + + M+ + ++P+ N
Sbjct: 505 AKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIELQLKPSASILN 551
>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
Length = 797
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 117/245 (47%), Gaps = 5/245 (2%)
Query: 118 MPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLG--IEPDLVSYNTIIKAFVD 175
MP C V+S+N LL N K+ +E L + G P++VSY T+I F
Sbjct: 156 MPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVINGFFT 215
Query: 176 KGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRS 235
+G +D A L EM +GI+ +++T+ T++ G AE +++ M++ V+P+ +
Sbjct: 216 EGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDT 275
Query: 236 YNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN--- 292
YN + G + K+ + ++ EM + + PD +T+ +L+ N G EA+ +++
Sbjct: 276 YNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMI 335
Query: 293 KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVE 352
+ G N AI+ +L+ KG L +L D ++ AK+ ++
Sbjct: 336 RKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMID 395
Query: 353 EAKEL 357
EA +
Sbjct: 396 EAMHI 400
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 122/263 (46%), Gaps = 4/263 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI K ++A F++M + FN+L+ K+++ + ++ ++
Sbjct: 419 LIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQ- 477
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
GI PD+V +NTI+ KG + A L+ ME+ G R D+I++ TL+ G GR +A
Sbjct: 478 GIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEA 537
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
K + M+++ ++P+ +YN L G + A + EM I P V T+ ++ G
Sbjct: 538 AKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHG 597
Query: 278 FVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
EAK Y SG N I+ +++ + + +D AF L + S+ ++
Sbjct: 598 LFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLE 657
Query: 335 QAPLQLVVDRLAKELRVEEAKEL 357
+++ L K R E+A L
Sbjct: 658 ITTFNIMIGALFKSGRNEDAMHL 680
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 103/214 (48%), Gaps = 4/214 (1%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
+ A +F EM R + V+++ ++ ++ D +G+F+ + K G++PD +YN
Sbjct: 220 DKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDK-GVKPDNDTYNC 278
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
+I ++ G +L EM G++ D T+ +LL +NGR +A +++M+
Sbjct: 279 LIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKG 338
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
++PNV Y + G A + + +L+ M ++PD F + + + ++EA
Sbjct: 339 IKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAM 398
Query: 289 RWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFA 319
+NK G + F L+ +C+ G +D A
Sbjct: 399 HIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDA 432
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 102/231 (44%), Gaps = 4/231 (1%)
Query: 130 FNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEM 189
FN + A DE +F + + G+ PD+V++ +I A G +D A +M
Sbjct: 381 FNIIFTAYAKKAMIDEAMHIFNKMKQQ-GLSPDVVNFGALIDALCKLGRVDDAVLKFNQM 439
Query: 190 EKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQT 249
+G+ ++ FN+L+ G + ++ A++ + M+N +RP+V +N L L + Q
Sbjct: 440 MNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQV 499
Query: 250 KKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLL 306
KA L+ M PDV ++ LI G G ++EA + + G ++ + L
Sbjct: 500 MKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTL 559
Query: 307 VPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
+ C G +D A+ + + ++ L R EAKEL
Sbjct: 560 LHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKEL 610
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 127/296 (42%), Gaps = 7/296 (2%)
Query: 25 GSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQK 84
+VI G + E + + + F + D G + N YT + L A+ E + + Q
Sbjct: 207 ATVINGFFTEGQVDKAYNLFLEMMDRG-IQPNVVTYTTVIDGLCKAQVVDRAEGVFQ-QM 264
Query: 85 QYKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKF 143
K + + T LI Y ++ ++ +EM + ++ +LL N+ +
Sbjct: 265 IDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRC 324
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT 203
E F + K GI+P++ Y +I + KG+L + LL M + G+ D FN
Sbjct: 325 REARFFFDSMIRK-GIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNI 383
Query: 204 LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
+ + +A I+ M + P+V ++ A +D L + A+ +M ++
Sbjct: 384 IFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEG 443
Query: 264 INPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDL 316
+ P++F F +L+ G E+AK +Y + G + F ++ +C KG +
Sbjct: 444 VAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQV 499
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 109/244 (44%), Gaps = 39/244 (15%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A+++ D M V+S+ L+G + DE D+ +G++PD +YNT++
Sbjct: 502 AQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSL-DVMLSVGLKPDEWTYNTLL 560
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
+ G +D A + EM + GI ++T++T+L G ++ RF++A++++ M+ +
Sbjct: 561 HGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQ 620
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEIN------------------------- 265
N+ YN L+GL+ +A +L + SK+
Sbjct: 621 WNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHL 680
Query: 266 ----------PDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCE 312
PDVFT+ + + + EG LEE ++ KSG N + LV +
Sbjct: 681 FATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLH 740
Query: 313 KGDL 316
+GD+
Sbjct: 741 RGDI 744
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 117/265 (44%), Gaps = 4/265 (1%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
+VI G+ K + R F++ D G + + Y + + +++ + +LE
Sbjct: 243 TVIDGLCKAQVVDRAEGVFQQMIDKG-VKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSA 301
Query: 86 YKDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
+ + + +T L+ AR FD M + + V + L+
Sbjct: 302 H-GLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALS 360
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
E+ L +L + G+ PD +N I A+ K +D A + +M+++G+ D++ F L
Sbjct: 361 EMHDLL-NLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGAL 419
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+ GR DA + M+N V PN+ +N+ + GL + +KA E EM ++ I
Sbjct: 420 IDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGI 479
Query: 265 NPDVFTFYALIKGFVNEGNLEEAKR 289
PDV F ++ +G + +A+R
Sbjct: 480 RPDVVFFNTILCNLCTKGQVMKAQR 504
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 94/193 (48%), Gaps = 13/193 (6%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACV-------NSKKFDEVDGLFKDLPHKLGIE 160
++A K+FD + ++++FN LL A ++ + + V LF + + I+
Sbjct: 30 LDDALKLFDGLLTHARPASIIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECTIK 89
Query: 161 --PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAE 218
PDL +Y+ +I F G L+ + K G R++ I N LL G R +A
Sbjct: 90 VTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAM 149
Query: 219 KIW-ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM---RSKEINPDVFTFYAL 274
I + M + P+V SYN L G EK+ ++ALEL+ M + + P+V ++ +
Sbjct: 150 DILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATV 209
Query: 275 IKGFVNEGNLEEA 287
I GF EG +++A
Sbjct: 210 INGFFTEGQVDKA 222
>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
Length = 855
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 157/348 (45%), Gaps = 18/348 (5%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
+VI G+ K ++ + F+ S T T YT + L A+ ++ E Q
Sbjct: 403 AVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRT-TYTVVIDGLCKAQMLPDACKVFEQMVQ 461
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
+ LI + KA+ + ARK+ D M + E T +++ +++ +E
Sbjct: 462 KGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINE 521
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
+ + + G EP L + +++ ++ KG + A +L EM +G D+I + +L+
Sbjct: 522 AKEVIAQMRER-GCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLI 580
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEIN 265
+S GR +A ++++M+ P+ +Y + + + A E++ M +
Sbjct: 581 DLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVG 640
Query: 266 PDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
PD F + +L+ G+V +++A Y++ SG N F +L+ + + G D AF+L
Sbjct: 641 PDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSL 700
Query: 323 CKRTFSERCLVDQAPLQLV-----VDRLAKELRVEEA----KELVELG 361
F E D+ P LV +D L K RV EA +E+++ G
Sbjct: 701 ----FKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRG 744
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 137/305 (44%), Gaps = 4/305 (1%)
Query: 50 LGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFE 109
L RFR + +YT + A +ILE I LI K +
Sbjct: 117 LKRFRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVD 176
Query: 110 NARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTI 169
A ++F+ M C ++F L+ A N K DE L++++ + G EP L +++
Sbjct: 177 EAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIER-GYEPYLEVQDSL 235
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
I A G +D AN + + K + + +N+L+ G+ GR D K+ MV +
Sbjct: 236 IFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDN 295
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
P++++YN + G + + ALEL + S P+ T+ +I+G + +EEAK
Sbjct: 296 FPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKA 355
Query: 290 WYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKEL 349
+++++ ++ + ++ + + +D A L ++ + C + V+D L K
Sbjct: 356 FFDEA---LDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAG 412
Query: 350 RVEEA 354
R+E+
Sbjct: 413 RIEDG 417
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 116/258 (44%), Gaps = 5/258 (1%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
KA + A ++F EMP CE T++S+N ++ + K DE F + G EPD+
Sbjct: 32 KARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDN-GCEPDV 90
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
+++ T+I F G + LL + K+ R D+ + +++ G+ G KI E
Sbjct: 91 IAFTTLIHGFCKAGQPQVGHMLLNQALKR-FRPDVFLYTSVIHGYCKAGDLDTGFKILEE 149
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M+ P+ +Y +D L + +A EL MR D TF LI+ N G
Sbjct: 150 MLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEALSNHGK 209
Query: 284 LEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL 340
L+EA Y + G + L+ +C+ G +D A + + +++ +
Sbjct: 210 LDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNS 269
Query: 341 VVDRLAKELRVEEAKELV 358
++D K RV++ +L+
Sbjct: 270 LMDGYCKLGRVDDGLKLL 287
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 101/206 (49%), Gaps = 4/206 (1%)
Query: 155 HKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRF 214
H G+ PD+V+ N ++ +D A L EM G ++++NT++ G S +
Sbjct: 12 HTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDKM 71
Query: 215 ADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYAL 274
+A K + +M++ P+V ++ + G Q + L+ + K PDVF + ++
Sbjct: 72 DEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQAL-KRFRPDVFLYTSV 130
Query: 275 IKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERC 331
I G+ G+L+ + + +GC + A + +L+ +C+ G +D A+ L +R C
Sbjct: 131 IHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGC 190
Query: 332 LVDQAPLQLVVDRLAKELRVEEAKEL 357
L D +++ L+ +++EA EL
Sbjct: 191 LGDYVTFMTLIEALSNHGKLDEACEL 216
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 92/195 (47%), Gaps = 3/195 (1%)
Query: 102 YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEP 161
Y K + A V+D M + ++FN L+ K D LFK++ K + P
Sbjct: 653 YVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPP 712
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
LVSY +I G + A + EM +GI + T+ +L+ GR +A+K+
Sbjct: 713 TLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLV 772
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
E MV + V P+V++Y+A + GL A ++ EM + P+ T+ L +GF
Sbjct: 773 EDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAA 832
Query: 282 G---NLEEAKRWYNK 293
G +LE K+ +++
Sbjct: 833 GRALDLEAVKQHFSQ 847
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 111/259 (42%), Gaps = 13/259 (5%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
E A EM V++ N +L ++K D+ LF ++P +G EP +VSYN
Sbjct: 1 MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMP-SMGCEPTIVSYN 59
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
T+I +D A M G D+I F TL+ GF G+ ++ ++N
Sbjct: 60 TVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQ----PQVGHMLLNQ 115
Query: 228 NV---RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
+ RP+V Y + + G +++ EM + PD ++ LI G +
Sbjct: 116 ALKRFRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRV 175
Query: 285 EEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQ-L 340
+EA + KSGC + F L+ + G LD A L R ER +Q
Sbjct: 176 DEAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACEL-YREMIERGYEPYLEVQDS 234
Query: 341 VVDRLAKELRVEEAKELVE 359
++ L K +V+EA E+ +
Sbjct: 235 LIFALCKAGKVDEANEIYQ 253
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/372 (20%), Positives = 142/372 (38%), Gaps = 81/372 (21%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
++ G + N L ++ FK S G + N YT +Q L +A+R
Sbjct: 305 LVAGFSRANRLDDALELFKLLSSYG-CKPNAATYTTIIQGLYDAQRM------------- 350
Query: 87 KDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEV 146
E A+ FDE V+S+ ++ +SK+ DE
Sbjct: 351 ----------------------EEAKAFFDE------ALDVISYTTVIKGLADSKRIDEA 382
Query: 147 DGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLD-------------------------- 180
LF+ L G P++V+Y +I + G ++
Sbjct: 383 CELFEKL-KTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVID 441
Query: 181 ---------SANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRP 231
A + +M +KG D IT+ TL+ GF + +A K+ + M+ P
Sbjct: 442 GLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEP 501
Query: 232 NVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY 291
+Y + + G +A E++ +MR + P +F F +L+ ++++G EEA +
Sbjct: 502 TAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVL 561
Query: 292 NK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKE 348
+ GC + ++ L+ + G + A ++ + C D ++ +K
Sbjct: 562 TEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKI 621
Query: 349 LRVEEAKELVEL 360
VE A E++EL
Sbjct: 622 GNVEAAGEILEL 633
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 110/258 (42%), Gaps = 33/258 (12%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I Y KA + K+ +EM C ++ L+ + DE LF+ + K
Sbjct: 130 VIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERM-RKS 188
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G D V++ T+I+A + G LD A L EM ++G L ++L+ G+ +A
Sbjct: 189 GCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEA 248
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+I++T+V V + +YN+ +DG + L+L+ +M + PD+ T+ L+ G
Sbjct: 249 NEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAG 308
Query: 278 FVNEGNLEEAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAP 337
F L++A +FKLL + C+ + A
Sbjct: 309 FSRANRLDDALE------------LFKLLSSYGCKP--------------------NAAT 336
Query: 338 LQLVVDRLAKELRVEEAK 355
++ L R+EEAK
Sbjct: 337 YTTIIQGLYDAQRMEEAK 354
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 1/123 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI GKA A F EM R ++ +L+ + + + E L +D+ KL
Sbjct: 720 LIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMV-KL 778
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ PD+ +Y+ +I +D +D+A + EM K+G + +T+ L GF + GR D
Sbjct: 779 GVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALDL 838
Query: 218 EKI 220
E +
Sbjct: 839 EAV 841
>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
Length = 895
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 153/339 (45%), Gaps = 35/339 (10%)
Query: 21 PKFIGSVIRGIYKENNLKR-----------LVDKFKKS-------------SDLGRFRTN 56
P + S+ R I ++ R LVD +KK+ +DLG T
Sbjct: 149 PLVLASIQRAIQDTDHRSRSPSPSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTR 208
Query: 57 TGIYTGTVQRL--ANAKRFRW-IEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARK 113
G ++ L A+A W ++ +E D+ + I + KA F+ A+K
Sbjct: 209 R-CCNGLLKDLLRADAMELLWKLKGFMEGAGILPDVYT---YSTFIEAHCKARDFDAAKK 264
Query: 114 VFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAF 173
VF+EM R+C +++N ++ S +E G FK+ G+ PD +Y ++
Sbjct: 265 VFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFG-FKEEMVDYGLSPDAFTYGALMNGL 323
Query: 174 VDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNV 233
L A LL EM G++ +++ + TL+ GF G+ A+A I + M++ V+PN
Sbjct: 324 CKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNK 383
Query: 234 RSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK 293
Y+ + GL Q +A +L+ EM + PD FT+ L++G + + + A N+
Sbjct: 384 IMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNE 443
Query: 294 ---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSE 329
SG N + +++ +C+ G+ A NL + SE
Sbjct: 444 MRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISE 482
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 113/230 (49%), Gaps = 7/230 (3%)
Query: 59 IYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFT-ARLIALYGKAAMFENARKVFDE 117
+ +G + A + F + EE++++ +S + FT L+ K + + A+ + DE
Sbjct: 284 MISGLCRSGAVEEAFGFKEEMVDY-----GLSPDAFTYGALMNGLCKGSRLKEAKALLDE 338
Query: 118 MPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKG 177
M + ++ + L+ + K E + K++ G++P+ + Y+ +I+ G
Sbjct: 339 MSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISA-GVQPNKIMYDNLIRGLCKIG 397
Query: 178 SLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYN 237
L A+ LL EM K G+R D T+N L+ G + A ++ M N + PNV SY
Sbjct: 398 QLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYG 457
Query: 238 ARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
++GL ++K+A L+ EM S+ + P+ F + LI G EGN+ A
Sbjct: 458 IMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLA 507
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 104/221 (47%), Gaps = 4/221 (1%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A + EM + + ++ L+ + L K++ K+G+ PD +YN ++
Sbjct: 367 AFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMI-KVGLRPDTFTYNPLM 425
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
+ + D A LL EM GI ++ ++ ++ G NG +A + E M++ ++
Sbjct: 426 QGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLK 485
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
PN Y + G + E A E + +M ++PD+F + +LIKG G +EEA+ +
Sbjct: 486 PNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEY 545
Query: 291 Y---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFS 328
Y K G ++ + L+ C+ G+L+ A L ++ +
Sbjct: 546 YAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLN 586
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/370 (21%), Positives = 148/370 (40%), Gaps = 43/370 (11%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
+I G KE N+ + +K + + Y ++ L+ R EE Q Q
Sbjct: 494 LIIGHSKEGNISLACEALEKMTK-ANVHPDLFCYNSLIKGLSTVGRMEEAEEYYA-QVQK 551
Query: 87 KDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
+ + + FT + LI Y K E A ++ +M + ++ LL S +++
Sbjct: 552 RGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEK 611
Query: 146 VDGLFK------DLP----------------------------HKLGIEPDLVSYNTIIK 171
V + + D P K G+ PDL Y+++I
Sbjct: 612 VSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLIS 671
Query: 172 AFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRP 231
++ A LL EM K+G+ ++ +N L+ GF +G + A ++++++ + P
Sbjct: 672 GLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVP 731
Query: 232 NVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA---- 287
N +Y A +DG A +L EM + I PD F + L G + +LE+A
Sbjct: 732 NCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLT 791
Query: 288 KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAK 347
+ +N+ N ++F LV C++G L L + + ++ VV K
Sbjct: 792 EEMFNRGYA--NVSLFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEFGK 849
Query: 348 ELRVEEAKEL 357
++ EA +
Sbjct: 850 AGKLGEAHRV 859
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 114/270 (42%), Gaps = 39/270 (14%)
Query: 96 ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPH 155
A LI + K A + ++M N + +N+L+ + +E + + +
Sbjct: 492 APLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQV-Q 550
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
K G+ PD +Y+ +I + G+L+ A+ LL +M G++ + T+ LL G++ + +
Sbjct: 551 KRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYE 610
Query: 216 DAEKIWETMV----------------------NMNVR-------------PNVRSYNARL 240
I ++M+ NM V P++ Y++ +
Sbjct: 611 KVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLI 670
Query: 241 DGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCG 297
GL +KA+ L+ EM + + P + + ALI GF G++ A+ ++ G
Sbjct: 671 SGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLV 730
Query: 298 MNKAIFKLLVPFVCEKGDLDFAFNLCKRTF 327
N + L+ C+ GD+ AF+L K
Sbjct: 731 PNCVTYTALIDGNCKNGDITDAFDLYKEML 760
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 93/203 (45%), Gaps = 11/203 (5%)
Query: 88 DISKEGFTA------RLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNS 140
+++KEG LI + ++ AR VFD + + +++ AL+ G C N
Sbjct: 688 EMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNG 747
Query: 141 KKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLIT 200
D D L+K++ + GI PD YN + D L+ A L EM +G ++
Sbjct: 748 DITDAFD-LYKEMLDR-GIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYA-NVSL 804
Query: 201 FNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMR 260
FNTL+ GF G+ + EK+ M++ + PN ++ + + +A + E++
Sbjct: 805 FNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAHRVFAELQ 864
Query: 261 SKEINPDVFTFYALI-KGFVNEG 282
K+ + ++L+ +N+G
Sbjct: 865 QKKASQSATDRFSLLFTDMINKG 887
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/300 (18%), Positives = 131/300 (43%), Gaps = 7/300 (2%)
Query: 25 GSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQK 84
G+++ G KE D K+ G + N +Y ++ L + ++L+
Sbjct: 352 GTLVDGFMKEGKTAEAFDILKEMISAG-VQPNKIMYDNLIRGLCKIGQLGRASKLLKEMI 410
Query: 85 QYKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKF 143
+ + + FT L+ + + + A ++ +EM V S+ ++ + +
Sbjct: 411 KVG-LRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGES 469
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT 203
E L +++ + G++P+ Y +I +G++ A L +M K + DL +N+
Sbjct: 470 KEAGNLLEEMISE-GLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNS 528
Query: 204 LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
L+ G + GR +AE+ + + + P+ +Y+ + G +KA +L+ +M +
Sbjct: 529 LIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSG 588
Query: 264 INPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAF 320
+ P+ T+ L++G+ + E+ SG + I+ +++ + +++ AF
Sbjct: 589 LKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAF 648
>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
Length = 814
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 152/360 (42%), Gaps = 19/360 (5%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
+VI G +KE ++ + D FK+ G + Y V L A+ E L
Sbjct: 224 TVIDGFFKEGDVNKACDLFKEMVQRG-IPPDLVTYNSVVHALCKARAMDKAEAFLRQMVN 282
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
+ + LI Y ++ A +VF EM + V++ + L+G+ K E
Sbjct: 283 KRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKE 342
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
+F + K G PD+ SYN ++ + KG L L M GI D TFN L+
Sbjct: 343 ARDVFDTMAMK-GQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLI 401
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEIN 265
+ + G A I+ M + V+P+V +Y + L + A+E +M + +
Sbjct: 402 KAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVA 461
Query: 266 PDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
PD + + LI+GF G+L +AK ++ +G ++ F ++ +C+ G + A N+
Sbjct: 462 PDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNI 521
Query: 323 CKRTFSERCLVDQAPLQLVVD------RLAKELRVEEA--------KELVELGKTNSYCR 368
T + D +++D ++ K LRV +A +V N YC+
Sbjct: 522 FDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCK 581
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 133/298 (44%), Gaps = 39/298 (13%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI Y M + A +F+EM + V+++ ++ A K D+ F + +
Sbjct: 400 LIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQ- 458
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ PD +YN +I+ F GSL A L+ E+ G+ LD++ F++++ GR DA
Sbjct: 459 GVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDA 518
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ I++ VN+ + P+ Y+ +DG + + +KAL + M S I P+V + L+ G
Sbjct: 519 QNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNG 578
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKG-------------DLDFAFN 321
+ G ++E + + G + ++ +++ + + G + A +
Sbjct: 579 YCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMD 638
Query: 322 LC------KRTFSERCL----------------VDQAPLQLVVDRLAKELRVEEAKEL 357
+C + F RC ++ L ++D + + RVEEAK+L
Sbjct: 639 ICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDL 696
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 102/209 (48%), Gaps = 4/209 (1%)
Query: 102 YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEP 161
Y E A +VFD M E V+ + L+ + DE LF+++ + GI+P
Sbjct: 544 YCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQR-GIKP 602
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
+ Y+ II G A +EM + GI +D+ T+N +L G + N F +A ++
Sbjct: 603 STILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLF 662
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
+ + MNV+ N+ + N +DG+ ++ ++A +L + + P V T+ +I + E
Sbjct: 663 KELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKE 722
Query: 282 GNLEEAKRWYNK---SGCGMNKAIFKLLV 307
G +EEA+ ++ +GC N + +V
Sbjct: 723 GLVEEAEDMFSSMQNAGCEPNSRLLNHVV 751
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 141/348 (40%), Gaps = 44/348 (12%)
Query: 53 FRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ----YKDISKEGFTARLIALYGKAAMF 108
R N I ++ AKR +IL H+ D+ + + GK+
Sbjct: 142 LRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQA 201
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
++ ++ E G C V+++N ++ ++ LFK++ + GI PDLV+YN+
Sbjct: 202 DDLLRMMAE-GGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQR-GIPPDLVTYNS 259
Query: 169 IIKAFVDKGSLDSA-------------------NTLLY----------------EMEKKG 193
++ A ++D A N L+Y EM +
Sbjct: 260 VVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHS 319
Query: 194 IRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKAL 253
I D++T + L+ G+ +A +++TM P+V SYN L+G A +
Sbjct: 320 ILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMT 379
Query: 254 ELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFV 310
+L M I PD +TF LIK + N G L++A +N+ G + ++ ++ +
Sbjct: 380 DLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAAL 439
Query: 311 CEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
C G +D A + + D+ ++ + +AKEL+
Sbjct: 440 CRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELI 487
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/258 (20%), Positives = 108/258 (41%), Gaps = 9/258 (3%)
Query: 40 LVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLI 99
LV K +K+ + + GI V + I I E ++++ + G I
Sbjct: 546 LVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTI 605
Query: 100 ALYGKA--AMFENARKV-----FDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKD 152
LY +F+ R V F EM + ++N +L ++ FDE LFK+
Sbjct: 606 -LYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKE 664
Query: 153 LPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNG 212
L + ++ ++++ NT+I ++ A L + + + ++T++ ++ G
Sbjct: 665 L-RAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEG 723
Query: 213 RFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFY 272
+AE ++ +M N PN R N + L + + +A + ++ + + + T
Sbjct: 724 LVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTM 783
Query: 273 ALIKGFVNEGNLEEAKRW 290
L+ F ++G E R+
Sbjct: 784 LLVDLFSSKGTCREHIRF 801
>gi|255660786|gb|ACU25562.1| pentatricopeptide repeat-containing protein [Verbena canescens]
Length = 418
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 109/207 (52%), Gaps = 4/207 (1%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A+ VFD + + +V+SFN L+ + DE L K+ G++PD+ +Y+ +I
Sbjct: 155 AQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRL-KNAMQASGVQPDVYTYSVLI 213
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
+ +D AN L EM G+ + +TF TL+ G NGR A +I++ M++ ++
Sbjct: 214 NGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLS 273
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA--- 287
P++ +YN + GL + K+A +L+ EM K + PD T+ LI G EG+LE A
Sbjct: 274 PDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEY 333
Query: 288 KRWYNKSGCGMNKAIFKLLVPFVCEKG 314
++ K ++ + L+ +C++G
Sbjct: 334 RKKMIKENIRLDDVAYTALISGLCQEG 360
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 84/173 (48%), Gaps = 1/173 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K + A +++ +M ++ ++++N L+ + L ++ K
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMK- 305
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD ++Y T+I +G L++A +M K+ IRLD + + L+ G GR DA
Sbjct: 306 GLKPDKITYTTLIDGNCKEGDLETAFEYRKKMIKENIRLDDVAYTALISGLCQEGRSVDA 365
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
EK+ M+++ ++P + +Y ++ + +L+ EM+ P V T
Sbjct: 366 EKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
Length = 827
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 152/360 (42%), Gaps = 19/360 (5%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
+VI G +KE ++ + D FK+ G + Y V L A+ E L
Sbjct: 237 TVIDGFFKEGDVNKACDLFKEMVQRG-IPPDLVTYNSVVHALCKARAMDKAEAFLRQMVN 295
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
+ + LI Y ++ A +VF EM + V++ + L+G+ K E
Sbjct: 296 KRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKE 355
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
+F + K G PD+ SYN ++ + KG L L M GI D TFN L+
Sbjct: 356 ARDVFDTMAMK-GQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLI 414
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEIN 265
+ + G A I+ M + V+P+V +Y + L + A+E +M + +
Sbjct: 415 KAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVA 474
Query: 266 PDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
PD + + LI+GF G+L +AK ++ +G ++ F ++ +C+ G + A N+
Sbjct: 475 PDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNI 534
Query: 323 CKRTFSERCLVDQAPLQLVVD------RLAKELRVEEA--------KELVELGKTNSYCR 368
T + D +++D ++ K LRV +A +V N YC+
Sbjct: 535 FDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCK 594
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 133/298 (44%), Gaps = 39/298 (13%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI Y M + A +F+EM + V+++ ++ A K D+ F + +
Sbjct: 413 LIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQ- 471
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ PD +YN +I+ F GSL A L+ E+ G+ LD++ F++++ GR DA
Sbjct: 472 GVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDA 531
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ I++ VN+ + P+ Y+ +DG + + +KAL + M S I P+V + L+ G
Sbjct: 532 QNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNG 591
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKG-------------DLDFAFN 321
+ G ++E + + G + ++ +++ + + G + A +
Sbjct: 592 YCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMD 651
Query: 322 LC------KRTFSERCL----------------VDQAPLQLVVDRLAKELRVEEAKEL 357
+C + F RC ++ L ++D + + RVEEAK+L
Sbjct: 652 ICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDL 709
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 103/209 (49%), Gaps = 4/209 (1%)
Query: 102 YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEP 161
Y E A +VFD M E V+ + L+ + DE LF+++ + GI+P
Sbjct: 557 YCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQR-GIKP 615
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
+ Y+ II G A +EM + GI +D+ T+N +L G + N F +A ++
Sbjct: 616 STILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLF 675
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
+ + MNV+ N+ + N +DG+ ++ ++A +L + + P+V T+ +I + E
Sbjct: 676 KELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKE 735
Query: 282 GNLEEAKRWYNK---SGCGMNKAIFKLLV 307
G +EEA+ ++ +GC N + +V
Sbjct: 736 GLVEEAEDMFSSMQNAGCEPNSRLLNHVV 764
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 141/349 (40%), Gaps = 44/349 (12%)
Query: 53 FRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ----YKDISKEGFTARLIALYGKAAMF 108
R N I ++ AKR +IL H+ D+ + + GK+
Sbjct: 155 LRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQA 214
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
++ ++ E G C V+++N ++ ++ LFK++ + GI PDLV+YN+
Sbjct: 215 DDLLRMMAE-GGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQR-GIPPDLVTYNS 272
Query: 169 IIKAFVDKGSLDSA-------------------NTLLY----------------EMEKKG 193
++ A ++D A N L+Y EM +
Sbjct: 273 VVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHS 332
Query: 194 IRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKAL 253
I D++T + L+ G+ +A +++TM P+V SYN L+G A +
Sbjct: 333 ILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMT 392
Query: 254 ELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFV 310
+L M I PD +TF LIK + N G L++A +N+ G + ++ ++ +
Sbjct: 393 DLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAAL 452
Query: 311 CEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
C G +D A + + D+ ++ + +AKEL+
Sbjct: 453 CRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELIS 501
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/258 (20%), Positives = 109/258 (42%), Gaps = 9/258 (3%)
Query: 40 LVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLI 99
LV K +K+ + + GI V + I I E ++++ + G I
Sbjct: 559 LVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTI 618
Query: 100 ALYGKA--AMFENARKV-----FDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKD 152
LY +F+ R V F EM + ++N +L ++ FDE LFK+
Sbjct: 619 -LYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKE 677
Query: 153 LPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNG 212
L + ++ ++++ NT+I ++ A L + + + +++T++ ++ G
Sbjct: 678 L-RAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEG 736
Query: 213 RFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFY 272
+AE ++ +M N PN R N + L + + +A + ++ + + + T
Sbjct: 737 LVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAM 796
Query: 273 ALIKGFVNEGNLEEAKRW 290
L+ F ++G E R+
Sbjct: 797 LLVDLFSSKGTCREQIRF 814
>gi|297833654|ref|XP_002884709.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330549|gb|EFH60968.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 689
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/386 (22%), Positives = 169/386 (43%), Gaps = 40/386 (10%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
V++ + E N + F ++ + + +Y ++RL+ A+ + I+E +
Sbjct: 13 VLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSEARMVTHVGRIVELIRSQ 72
Query: 87 KDISKEGFTARLIALYGKAAMFENARKVFDEMPGR-NCEQTVLSFNALLGACVNSKKFDE 145
+ E +I YGK +M + A VF M CE + S+N LL A V +K++ +
Sbjct: 73 ECKCDEDVALSVIKTYGKNSMPDRALDVFKRMREIFGCEPGIRSYNTLLNAFVEAKQWVK 132
Query: 146 VDGLFK----------------------------------DLPHKLGIEPDLVSYNTIIK 171
V+ LF + K G +PD+ SY+T+I
Sbjct: 133 VESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLNWMWKEGFKPDVFSYSTVIN 192
Query: 172 AFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMV-NMNVR 230
G LD A L EM ++ + D+ +N L+ GF A ++W+ ++ + +V
Sbjct: 193 DLAKTGKLDDALELFDEMSERRVAPDVTCYNILIDGFLKEKDHKMAMQLWDKLLEDSSVY 252
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
PNV+++N + GL+ + L++ M+ E D++T+ +LI G +EGN+++A+
Sbjct: 253 PNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESV 312
Query: 291 YN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAK 347
+N + ++ + ++ C G + + L R +R V+ +++ L +
Sbjct: 313 FNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELW-RIMEQRNSVNIVSYNILIKGLLE 371
Query: 348 ELRVEEAKELVELGKTNSYCRYNLKF 373
+++EA + L Y N +
Sbjct: 372 NGKIDEATMIWRLMPAKGYAADNTTY 397
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 7/186 (3%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI +A F A EM + + +++ LLG +K + L +L H+
Sbjct: 505 LICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIE----LALELWHQF 560
Query: 158 ---GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRF 214
G+EPD++ +N +I G LD A T++ ME + +L+T+NTL+ G++
Sbjct: 561 LQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGYFKVRDS 620
Query: 215 ADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYAL 274
A IW M M ++P++ SYN L GL + + A+E + R+ I P V+T+ L
Sbjct: 621 NRATVIWGYMYKMGLQPDIISYNTILKGLCLCHRVSYAIEFFDDARNHGIFPTVYTWNIL 680
Query: 275 IKGFVN 280
++ VN
Sbjct: 681 VRAVVN 686
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 123/278 (44%), Gaps = 10/278 (3%)
Query: 91 KEGFT------ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
KEGF + +I K ++A ++FDEM R V +N L+ + K
Sbjct: 177 KEGFKPDVFSYSTVINDLAKTGKLDDALELFDEMSERRVAPDVTCYNILIDGFLKEKDHK 236
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
L+ L + P++ ++N +I G +D + M++ DL T+++L
Sbjct: 237 MAMQLWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSL 296
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+ G G AE ++ +V +V +YN L G + K++LEL M +
Sbjct: 297 IHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELWRIMEQRN- 355
Query: 265 NPDVFTFYALIKGFVNEGNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFN 321
+ ++ ++ LIKG + G ++EA R G + + + + +C G ++ A
Sbjct: 356 SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALG 415
Query: 322 LCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ + S+ +D ++D L K+ R+EEA LV+
Sbjct: 416 VMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVK 453
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 142/335 (42%), Gaps = 7/335 (2%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
+I G KE + K + + K + N + + L+ R +I + KQ
Sbjct: 225 LIDGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQ- 283
Query: 87 KDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
+ K+ +T + LI + A VF+E+ R V+++N +LG K E
Sbjct: 284 NEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKE 343
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
L++ + + + ++VSYN +IK ++ G +D A + M KG D T+ +
Sbjct: 344 SLELWRIMEQRNSV--NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFI 401
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEIN 265
G NG A + + + + +V +Y + +D L +++ ++A LV EM +
Sbjct: 402 HGLCVNGYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVE 461
Query: 266 PDVFTFYALIKGFVNEGNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
+ ALI G + + L +A R K+GC + +L+ +CE G A
Sbjct: 462 LNSHVCNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAF 521
Query: 323 CKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
K D +++ L ++ ++E A EL
Sbjct: 522 VKEMLENGLKPDLKTYSILLGGLCRDRKIELALEL 556
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 86/177 (48%), Gaps = 1/177 (0%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A V E+ + V ++ +++ ++ +E L K++ K G+E + N +I
Sbjct: 413 ALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMS-KHGVELNSHVCNALI 471
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
+ L A+ L+ M K G ++++N L+ G G+F +A + M+ ++
Sbjct: 472 GGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLK 531
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
P++++Y+ L GL +++ + ALEL + + PDV LI G + G L++A
Sbjct: 532 PDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDA 588
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 82/183 (44%), Gaps = 1/183 (0%)
Query: 96 ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPH 155
A +I K E A + EM E NAL+G + + + L + +
Sbjct: 433 ASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLSDASLLMRGMG- 491
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
K G P +VSYN +I + G A+ + EM + G++ DL T++ LL G + +
Sbjct: 492 KNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIE 551
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
A ++W + + P+V +N + GL + A+ ++ M + ++ T+ L+
Sbjct: 552 LALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLM 611
Query: 276 KGF 278
+G+
Sbjct: 612 EGY 614
>gi|255660932|gb|ACU25635.1| pentatricopeptide repeat-containing protein [Rhaphithamnus
venustus]
Length = 484
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 126/266 (47%), Gaps = 5/266 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I YG + + + K+F +M E+T+ S++AL ++ F + +
Sbjct: 86 MIDSYGNGGIVQESVKLFQKMDELGVERTIKSYDALFKVISRRGRYMMAKRYFNKMLSE- 144
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
GIEP ++N +I F G +++AN +M+ + I D+IT+NT++ G+Y + +A
Sbjct: 145 GIEPTRHTFNIMIWGFFLSGKVETANRFFEDMKNREITPDVITYNTMINGYYRVKKMEEA 204
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
EK + M N+ P V +Y + G Q AL LV EM+ I + T+ L+ G
Sbjct: 205 EKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGYGIKANAITYSTLLPG 264
Query: 278 FVNEGNLEEA----KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV 333
N + EA K +K + +IF L+ C+ G+LD A ++ K
Sbjct: 265 LCNAEKMSEARSILKEMVDKYIAPTDNSIFMRLISGQCKAGNLDAAADVLKAMIRLSVPT 324
Query: 334 DQAPLQLVVDRLAKELRVEEAKELVE 359
+ ++++ K + ++A +L++
Sbjct: 325 EAGHYGVLIENYCKAGQYDQAVKLLD 350
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 95/221 (42%), Gaps = 46/221 (20%)
Query: 73 FRWIEE--ILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSF 130
FRW+E + +H ++ ++I + G+A+ +AR + +MP + E +
Sbjct: 32 FRWVERSNLFQHNRETH--------LKIIEILGRASKLNHARCILLDMPKKGLEWDEDMW 83
Query: 131 NALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEME 190
++ + N E LF+ + +LG+E + SY+ + K +G A +M
Sbjct: 84 VLMIDSYGNGGIVQESVKLFQKMD-ELGVERTIKSYDALFKVISRRGRYMMAKRYFNKML 142
Query: 191 KKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTK 250
+GI TFN ++ GF+ +G+ A + +E
Sbjct: 143 SEGIEPTRHTFNIMIWGFFLSGKVETANRFFE---------------------------- 174
Query: 251 KALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY 291
+M+++EI PDV T+ +I G+ +EEA++++
Sbjct: 175 -------DMKNREITPDVITYNTMINGYYRVKKMEEAEKYF 208
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 96/215 (44%), Gaps = 17/215 (7%)
Query: 37 LKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTA 96
LK +VDK+ +D I+ + A ++L+ + ++ G
Sbjct: 278 LKEMVDKYIAPTD-------NSIFMRLISGQCKAGNLDAAADVLKAMIRLSVPTEAGHYG 330
Query: 97 RLIALYGKAAMFENARKVFDEM--------PGRNCEQTVLSFNALLGACVNSKKFDEVDG 148
LI Y KA ++ A K+ D++ P ++N L+G N+ + + +
Sbjct: 331 VLIENYCKAGQYDQAVKLLDKLIEKDIILRPQSTLHMESSAYNPLIGYLCNNGQTAKAEA 390
Query: 149 LFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
L + L KLG++ D + NT+I+ +GS DSA LL M ++ + + +++L+ +
Sbjct: 391 LVRQL-MKLGVQ-DPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYDSLVQSY 448
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
ADA+ ++M+ + P+ + + ++ L
Sbjct: 449 LKRSEPADAKAALDSMIENDHLPDSSLFRSVMESL 483
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 98/234 (41%), Gaps = 46/234 (19%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I Y + E A K F EM GRN E TV+++ L+ V+ + D+ L +++
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMK-GY 249
Query: 158 GIEPDLVSYNT----------------IIKAFVDK--------------------GSLDS 181
GI+ + ++Y+T I+K VDK G+LD+
Sbjct: 250 GIKANAITYSTLLPGLCNAEKMSEARSILKEMVDKYIAPTDNSIFMRLISGQCKAGNLDA 309
Query: 182 ANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV--RPN------V 233
A +L M + + + + L+ + G++ A K+ + ++ ++ RP
Sbjct: 310 AADVLKAMIRLSVPTEAGHYGVLIENYCKAGQYDQAVKLLDKLIEKDIILRPQSTLHMES 369
Query: 234 RSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+YN + L QT KA LV ++ + D LI+G EG+ + A
Sbjct: 370 SAYNPLIGYLCNNGQTAKAEALVRQLMKLGVQ-DPTALNTLIRGHSQEGSPDSA 422
>gi|255660832|gb|ACU25585.1| pentatricopeptide repeat-containing protein [Aloysia virgata]
gi|410109881|gb|AFV61020.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
virgata]
Length = 418
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 147/318 (46%), Gaps = 26/318 (8%)
Query: 66 RLANAKRFRWI-----EEILEHQKQ----------YKDISKEGFTARL------IALYGK 104
RL +F W+ ++LEH + Y++I G+ A L + + K
Sbjct: 90 RLTREHKF-WVPFDTCRKVLEHLMKLKYFKLVWGFYEEILDCGYPASLYFFNILMHRFCK 148
Query: 105 AAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLV 164
A+ VF+ + +V+SFN L+ + DE L K H G++PD+
Sbjct: 149 EGDIRVAQLVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRL-KSAMHASGVQPDVY 207
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
+Y+ +I + +D AN L EM KG+ + +TF TL+ G N R A +I++ M
Sbjct: 208 TYSVLINGLCKESKMDDANGLFDEMLDKGLVPNGVTFTTLIAGHCKNRRVDLAMEIYKQM 267
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
++ ++ P++ +YN + GL + K+A +L+ EM K + PD T+ LI G EG+L
Sbjct: 268 LSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDL 327
Query: 285 E---EAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLV 341
E E ++ + ++ + L+ +C++G A + + S D ++
Sbjct: 328 ETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSVGLKPDTGTYTMI 387
Query: 342 VDRLAKELRVEEAKELVE 359
++ K+ V +L++
Sbjct: 388 INEFCKKGDVWTGSKLLK 405
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 85/173 (49%), Gaps = 1/173 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LIA + K + A +++ +M ++ ++++N L+ + L ++ K
Sbjct: 247 LIAGHCKNRRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMK- 305
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD ++Y T+I +G L++A M ++ IRLD + + L+ G GR+ DA
Sbjct: 306 GLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDA 365
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
EK+ M+++ ++P+ +Y ++ + +L+ EM+ P V +
Sbjct: 366 EKVLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVS 418
>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
Length = 615
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 122/250 (48%), Gaps = 4/250 (1%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
ARK+FD M R E + ++ LL + E + LF DL ++G++PD+++YNT+I
Sbjct: 298 ARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLF-DLMVRIGVKPDIITYNTLI 356
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
G +D A LL M G++ D++T+ TL+ G+ R DA +++ MV+ V
Sbjct: 357 DGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVS 416
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
PN+ +YN L GL ++T A EL + ++ T+ ++ G +EA R
Sbjct: 417 PNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRM 476
Query: 291 YNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAK 347
+ + + F +++ + + G +D A +L + + D L+ + L +
Sbjct: 477 FQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIE 536
Query: 348 ELRVEEAKEL 357
+ +EE +L
Sbjct: 537 QGSLEELDDL 546
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 130/270 (48%), Gaps = 12/270 (4%)
Query: 102 YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEP 161
Y + + A +M E V+++++L+ + + E +F + K G+EP
Sbjct: 254 YCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMT-KRGLEP 312
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
D+ +Y T+++ +G + + L M + G++ D+IT+NTL+ G G+ +A K+
Sbjct: 313 DIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLL 372
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
+MV++ V+P++ +Y ++G + AL L EM S ++P++ T+ +++G +
Sbjct: 373 ASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHT 432
Query: 282 GNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD---- 334
AK Y KSG + + + +++ +C+ D A R F CL D
Sbjct: 433 RRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEAL----RMFQNLCLTDLQLE 488
Query: 335 QAPLQLVVDRLAKELRVEEAKELVELGKTN 364
+++ L K R++EAK+L N
Sbjct: 489 TRTFNIMIGALLKCGRMDEAKDLFAAHSAN 518
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 83/179 (46%), Gaps = 5/179 (2%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLG-IEPDLVSYN 167
E+AR VFDE+ R ++ N L V + G + P + +Y
Sbjct: 37 EDARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYA 96
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA-EKIWETMVN 226
+I G LD L + KKG R+D ITF LL G ++ R +DA + + M
Sbjct: 97 ILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTE 156
Query: 227 MNVRPNVRSYNARLDGLAIEKQTKKALELVGEM---RSKEINPDVFTFYALIKGFVNEG 282
+ P+V SYN L GL E ++++ALEL+ M R PDV ++ ++ GF EG
Sbjct: 157 LGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEG 215
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/193 (18%), Positives = 84/193 (43%), Gaps = 1/193 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI Y + + ++A +F EM ++++N +L ++++ L+ + K
Sbjct: 390 LINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSIT-KS 448
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G + +L +YN I+ D A + + ++L+ TFN ++ GR +A
Sbjct: 449 GTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEA 508
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ ++ + P+VR+Y+ + L + ++ +L M + D ++++
Sbjct: 509 KDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRK 568
Query: 278 FVNEGNLEEAKRW 290
+ G++ A +
Sbjct: 569 LLQRGDITRAGTY 581
>gi|48716454|dbj|BAD23061.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
[Oryza sativa Japonica Group]
Length = 580
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 128/281 (45%), Gaps = 4/281 (1%)
Query: 79 ILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACV 138
+ +H + + + ++ L+ K+ M ARKVFD+M +NA+L C+
Sbjct: 132 VFDHMRAREVVPDAHASSALLTALAKSRMTATARKVFDQMTRAGVAMNTHVYNAMLHVCL 191
Query: 139 NSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL 198
+ + L + G+ D S+NT+I + KG A + ME +G++ D+
Sbjct: 192 KAGDAALAESLMTRM-DAAGVPLDRFSFNTVIALYCRKGMQYEAMCVRERMENQGVKADV 250
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
+T+N+L+ G R +A ++ M V P+ +Y +DG ++A++L GE
Sbjct: 251 VTWNSLIHGLCKERRVKEASQLLREMAMAGVAPDHVTYTTLVDGYCRAGDLEEAVKLRGE 310
Query: 259 MRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSG---CGMNKAIFKLLVPFVCEKGD 315
M + + P V T+ A+++ +G ++E N+ + L+ C++GD
Sbjct: 311 MEAMGMLPGVATYNAILRKLCEDGKMKEVNVLLNEMDERKVQADHVTCNTLINAYCKRGD 370
Query: 316 LDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKE 356
+ A + +R +DQ + +V K ++EAKE
Sbjct: 371 MTSALKVKRRMMESGLQLDQFTYKALVHGFCKAKELDEAKE 411
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 106/216 (49%), Gaps = 4/216 (1%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
++A +A +VFD M R + +ALL A S+ +F + + G+ +
Sbjct: 122 QSARPHDALRVFDHMRAREVVPDAHASSALLTALAKSRMTATARKVFDQMT-RAGVAMNT 180
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
YN ++ + G A +L+ M+ G+ LD +FNT++ + G +A + E
Sbjct: 181 HVYNAMLHVCLKAGDAALAESLMTRMDAAGVPLDRFSFNTVIALYCRKGMQYEAMCVRER 240
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M N V+ +V ++N+ + GL E++ K+A +L+ EM + PD T+ L+ G+ G+
Sbjct: 241 MENQGVKADVVTWNSLIHGLCKERRVKEASQLLREMAMAGVAPDHVTYTTLVDGYCRAGD 300
Query: 284 LEEAKRWYNK-SGCGM--NKAIFKLLVPFVCEKGDL 316
LEEA + + GM A + ++ +CE G +
Sbjct: 301 LEEAVKLRGEMEAMGMLPGVATYNAILRKLCEDGKM 336
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 112/262 (42%), Gaps = 37/262 (14%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLP--- 154
+IALY + M A V + M + + V+++N+L+ ++ E L +++
Sbjct: 221 VIALYCRKGMQYEAMCVRERMENQGVKADVVTWNSLIHGLCKERRVKEASQLLREMAMAG 280
Query: 155 -------------------------------HKLGIEPDLVSYNTIIKAFVDKGSLDSAN 183
+G+ P + +YN I++ + G + N
Sbjct: 281 VAPDHVTYTTLVDGYCRAGDLEEAVKLRGEMEAMGMLPGVATYNAILRKLCEDGKMKEVN 340
Query: 184 TLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
LL EM+++ ++ D +T NTL+ + G A K+ M+ ++ + +Y A + G
Sbjct: 341 VLLNEMDERKVQADHVTCNTLINAYCKRGDMTSALKVKRRMMESGLQLDQFTYKALVHGF 400
Query: 244 AIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNK 300
K+ +A E + EM +P+ ++ G N+ N + K G +K
Sbjct: 401 CKAKELDEAKEALFEMMGAGFSPNYSVLSWIVDGLCNKNNAVAVLAIPDELMKRGFPPDK 460
Query: 301 AIFKLLVPFVCEKGDLDFAFNL 322
A+++ L+ +C+KG +D A N+
Sbjct: 461 AVYRSLIRRLCKKGFIDLAGNV 482
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 90/196 (45%), Gaps = 1/196 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+ Y +A E A K+ EM V ++NA+L K EV+ L ++ +
Sbjct: 291 LVDGYCRAGDLEEAVKLRGEMEAMGMLPGVATYNAILRKLCEDGKMKEVNVLLNEMDER- 349
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
++ D V+ NT+I A+ +G + SA + M + G++LD T+ L+ GF +A
Sbjct: 350 KVQADHVTCNTLINAYCKRGDMTSALKVKRRMMESGLQLDQFTYKALVHGFCKAKELDEA 409
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ M+ PN + +DGL + L + E+ + PD + +LI+
Sbjct: 410 KEALFEMMGAGFSPNYSVLSWIVDGLCNKNNAVAVLAIPDELMKRGFPPDKAVYRSLIRR 469
Query: 278 FVNEGNLEEAKRWYNK 293
+G ++ A +N+
Sbjct: 470 LCKKGFIDLAGNVFNE 485
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 51/128 (39%), Gaps = 15/128 (11%)
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
K G PD Y ++I+ KG +D A + EM+ KG+ D + + TL + + G+
Sbjct: 453 KRGFPPDKAVYRSLIRRLCKKGFIDLAGNVFNEMQGKGLEADCLVYATLACAYLTAGKPV 512
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ---------------TKKALELVGEMR 260
A I M + + YN A EK TK +++ + R
Sbjct: 513 AALDILNEMAKKQLYITPQIYNCMCTSYADEKGSLNMLWVHAIERGLITKSVYKVMHQAR 572
Query: 261 SKEINPDV 268
K NP V
Sbjct: 573 MKSSNPAV 580
>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
Length = 841
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 142/301 (47%), Gaps = 8/301 (2%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++++G K+ +L ++ F K ++ G N Y ++ EI K
Sbjct: 334 TLMKGYCKQGDLDSALELFDKMNENGICPNNV-TYAVIIEWCCKNGNMDKAYEIYNQMKN 392
Query: 86 YKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
KDIS F LI Y KA E A K+FDE V ++N+LL K
Sbjct: 393 -KDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIAN-VFTYNSLLSWLCKEGKMS 450
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
E +++ + K G+ P +VSYN +I +G +DSAN + EM +KG++ +LIT++ L
Sbjct: 451 EACSIWEKMVRK-GVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVL 509
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+ G++ G A +++ M N+ P+ + N ++GL +T ++ + + ++ +
Sbjct: 510 MDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGF 569
Query: 265 NPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFN 321
P T+ +I GFV EG++ A Y K G N + L+ C+ ++D A
Sbjct: 570 IPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALK 629
Query: 322 L 322
+
Sbjct: 630 V 630
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 110/209 (52%), Gaps = 8/209 (3%)
Query: 89 ISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEV 146
+S FT LI + K+ + A KV DEM + E V + AL+ G C +K D V
Sbjct: 604 VSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFC---RKGDMV 660
Query: 147 DG--LFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
+ L +L ++G+ P+ V Y+++I F ++++A L M +GI DL + TL
Sbjct: 661 NASQLLSEL-QEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTL 719
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+ G G+ A +++ M+ + P++ +Y+ + GL + Q + A +++ +M K +
Sbjct: 720 ISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCM 779
Query: 265 NPDVFTFYALIKGFVNEGNLEEAKRWYNK 293
P VF + LI G EGNL+EA R +N+
Sbjct: 780 TPTVFIYNTLITGHFKEGNLQEAFRLHNE 808
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 146/328 (44%), Gaps = 21/328 (6%)
Query: 51 GRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ---------YKDISKEGFTARLIAL 101
G+ I+ V++ + IL H +Q + ++ ++G LI
Sbjct: 447 GKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITY 506
Query: 102 ------YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPH 155
Y K E A ++D M G N + + N ++ + + E K L
Sbjct: 507 SVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQ 566
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
+ G P ++YN II FV +GS++SA + EM K G+ ++ T+ L+ GF +
Sbjct: 567 E-GFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMD 625
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
A K+ + M N + +V Y A +DG + A +L+ E++ ++P+ + ++I
Sbjct: 626 LALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMI 685
Query: 276 KGFVNEGNLEEA----KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERC 331
GF N+E A KR N+ G + I+ L+ + ++G L FA L ++
Sbjct: 686 SGFRKLQNMEAALHLHKRMINE-GIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGI 744
Query: 332 LVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ D +++ L + ++E A++++E
Sbjct: 745 MPDLITYSVLIHGLCNKGQLENAQKILE 772
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 118/256 (46%), Gaps = 38/256 (14%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K M AR V+++M + + + + ++ A + K +E +G F++ +K G+E D
Sbjct: 201 KNNMIREARDVYNKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNK-GVELDA 259
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGI----------------------------- 194
+Y+ +I+A K +A LL EM KG
Sbjct: 260 RAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGE 319
Query: 195 ------RLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
++++ TL+ G+ G A ++++ M + PN +Y ++
Sbjct: 320 MLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGN 379
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS-GCGM-NKAIFKLL 306
KA E+ +M++K+I+P VF +LI+G++ + EEA + ++++ CG+ N + L
Sbjct: 380 MDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIANVFTYNSL 439
Query: 307 VPFVCEKGDLDFAFNL 322
+ ++C++G + A ++
Sbjct: 440 LSWLCKEGKMSEACSI 455
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 101/231 (43%), Gaps = 4/231 (1%)
Query: 130 FNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEM 189
FN LL + V +K+ ++ F L K I P L N + V + A + +M
Sbjct: 157 FNYLLNSYVKTKRINDAVDCFNSLIEK-DIVPCLTVMNIFLSELVKNNMIREARDVYNKM 215
Query: 190 EKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQT 249
KG++ D T + ++ G+ +AE + N V + R+Y+ ++ + + +
Sbjct: 216 ASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDS 275
Query: 250 KKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS-GCG--MNKAIFKLL 306
AL L+ EMR K P F +I + +G + EA + + CG MN + L
Sbjct: 276 VAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTL 335
Query: 307 VPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
+ C++GDLD A L + + ++++ K +++A E+
Sbjct: 336 MKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEI 386
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 77/170 (45%), Gaps = 7/170 (4%)
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
FN LL + R DA + +++ ++ P + N L L ++A ++ +M
Sbjct: 156 VFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDVYNKM 215
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS---GCGMNKAIFKLLVPFVCEKGDL 316
SK + D T +I+ + EG LEEA+ W+ ++ G ++ + +++ VC+K D
Sbjct: 216 ASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDS 275
Query: 317 DFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA----KELVELGK 362
A L + + + + V+ K+ ++ EA E++ GK
Sbjct: 276 VAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGK 325
>gi|225440005|ref|XP_002276355.1| PREDICTED: pentatricopeptide repeat-containing protein At2g37230
[Vitis vinifera]
Length = 763
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 139/309 (44%), Gaps = 6/309 (1%)
Query: 21 PKFIGSVIRGI-YKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEI 79
P+F S++ + + N + F+ G FR + + ++ L A + I
Sbjct: 115 PQFDHSLVWNVLHGSRNSDHALQFFRWVERAGLFRHDRDTHLKIIEILGRASKLNHARCI 174
Query: 80 LEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
L + E LI YGKA + + + KVF +M E+T+ S++AL +
Sbjct: 175 LLDMPKKGVEWDEDLFVLLIDSYGKAGIVQESVKVFQKMKELGVERTIKSYDALFKVILR 234
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
++ F + ++ G+ P +YN +I F +++AN EM+++ I D++
Sbjct: 235 RGRYMMAKRYFNAMLNE-GVMPTCHTYNIMIWGFFLSLKVETANRFFEEMKERRISPDVV 293
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
T+NT++ G+Y + +AEK + M N+ P V SY + G + L L EM
Sbjct: 294 TYNTMINGYYRIKKMEEAEKFFVEMKGRNIEPTVISYTTMIKGYVSVGRVDDGLRLFEEM 353
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLEEA----KRWYNKSGCGMNKAIFKLLVPFVCEKGD 315
+S I P+ T+ L+ G + + EA K + + +IF L+ C+ G
Sbjct: 354 KSFGIKPNAVTYSTLLPGLCDGEKMLEAQNVVKEMVERYIAPKDNSIFMRLITCQCKAGQ 413
Query: 316 LDFAFNLCK 324
LD A ++ K
Sbjct: 414 LDAAADVLK 422
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 85/224 (37%), Gaps = 11/224 (4%)
Query: 76 IEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLG 135
++E++E KD S RLI KA + A V M + + L+
Sbjct: 385 VKEMVERYIAPKDNS---IFMRLITCQCKAGQLDAAADVLKAMIRLSIPTEAGHYGVLIE 441
Query: 136 ACVNSKKFDEVDGLFKDLPHKL-------GIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
S +D L L K +E + YN II+ + G A TL +
Sbjct: 442 NFCKSGVYDRAVKLLDKLIEKEIILRPQNSLEMESSGYNLIIEYLCNSGQTSKAETLFRQ 501
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
+ KKG++ D I FN L+ G G A +I + M V +Y ++ + +
Sbjct: 502 LMKKGVQ-DPIAFNNLIRGHSKEGAPESAFEILKIMGRREVPREADAYRLLIESFLKKGE 560
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN 292
A + M PD F ++++ +G ++ A R N
Sbjct: 561 PADAKTALDGMIENGHIPDSSLFRSVMESLFEDGRIQTASRVMN 604
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 50/275 (18%), Positives = 106/275 (38%), Gaps = 48/275 (17%)
Query: 34 ENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEG 93
+N +K +V+++ D I+ + A + ++L+ + ++ G
Sbjct: 382 QNVVKEMVERYIAPKD-------NSIFMRLITCQCKAGQLDAAADVLKAMIRLSIPTEAG 434
Query: 94 FTARLIALYGKAAMFENARKVFDEM--------PGRNCEQTVLSFNALLGACVNSKKFDE 145
LI + K+ +++ A K+ D++ P + E +N ++ NS + +
Sbjct: 435 HYGVLIENFCKSGVYDRAVKLLDKLIEKEIILRPQNSLEMESSGYNLIIEYLCNSGQTSK 494
Query: 146 VDGLFKDLPHKLGIEP----DLV-----------------------------SYNTIIKA 172
+ LF+ L K +P +L+ +Y +I++
Sbjct: 495 AETLFRQLMKKGVQDPIAFNNLIRGHSKEGAPESAFEILKIMGRREVPREADAYRLLIES 554
Query: 173 FVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPN 232
F+ KG A T L M + G D F +++ + +GR A ++ MV V+ N
Sbjct: 555 FLKKGEPADAKTALDGMIENGHIPDSSLFRSVMESLFEDGRIQTASRVMNNMVEKGVKEN 614
Query: 233 VRSYNARLDGLAIEKQTKKALELVGEMRSKEINPD 267
+ L+ L + ++AL + + + PD
Sbjct: 615 MDLVAKILEALLLRGHVEEALGRIDLLMNNGCEPD 649
>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 504
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 114/229 (49%), Gaps = 6/229 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHK 156
L+ + + + A +M E +++F +LL G C + +D + D +
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDAL--YMFDRMVE 179
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
+G EP++V YNTII +D+A LL ME GIR D +T+N+L+ G ++GR+ D
Sbjct: 180 MGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDD 239
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
A ++ M + P+V ++NA +D E + +A EL EM + ++PD+ T+ LI
Sbjct: 240 ATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIY 299
Query: 277 GFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
G L+EA++ + GC + + +L+ C+ ++ L
Sbjct: 300 GLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKL 348
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 108/234 (46%), Gaps = 33/234 (14%)
Query: 126 TVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTL 185
++ F+ LL A KK+D V L++ + LGI +L + N ++ F L A +
Sbjct: 80 SIADFSRLLSAISKMKKYDVVIYLWEQM-QMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 186 LYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAI 245
L +M K G D++TF +LL GF R DA +++ MV M PNV YN +DGL
Sbjct: 139 LGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCK 198
Query: 246 EKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKAIFKL 305
KQ AL+L+ M I PD T+ +LI G N G ++A R + C + I+
Sbjct: 199 SKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVS---CMTKREIY-- 253
Query: 306 LVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
P V F FN ++D KE R+ EA+EL E
Sbjct: 254 --PDV-------FTFN------------------ALIDACVKEGRISEAEELYE 280
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 106/213 (49%), Gaps = 4/213 (1%)
Query: 110 NARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTI 169
+A +FD M E V+ +N ++ SK+ D L + GI PD V+YN++
Sbjct: 169 DALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVD-GIRPDAVTYNSL 227
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
I + G D A ++ M K+ I D+ TFN L+ GR ++AE+++E M+ ++
Sbjct: 228 ISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSL 287
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
P++ +Y+ + GL + + +A ++ G M SK PDV T+ LI G+ +E +
Sbjct: 288 DPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMK 347
Query: 290 WY---NKSGCGMNKAIFKLLVPFVCEKGDLDFA 319
+ ++ G N + +L+ C G L+ A
Sbjct: 348 LFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVA 380
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 138/276 (50%), Gaps = 10/276 (3%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I G+ K + +D + ++ R + Y + L N+ R+ ++ +
Sbjct: 191 TIIDGLCKSKQVDNALDLLNRM-EVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTK 249
Query: 86 YKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKF 143
++I + FT LI K A ++++EM R+ + +++++ L+ G C+ S+
Sbjct: 250 -REIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSR-L 307
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT 203
DE + +F + K G PD+V+Y+ +I + ++ L EM ++G+ + +T+
Sbjct: 308 DEAEQMFGFMVSK-GCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTV 366
Query: 204 LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
L+ G+ G+ AE+I++ MV V PN+ +YN L GL + +KAL ++ +M+
Sbjct: 367 LIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSG 426
Query: 264 INPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMN 299
++ D+ T+ +I+G G + +A Y C +N
Sbjct: 427 MDADIVTYNIIIRGMCKAGEVADAWDLY----CSLN 458
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 90/173 (52%), Gaps = 7/173 (4%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI Y K+ E+ K+F EM R + +++ L+ + K + + +FK +
Sbjct: 332 LINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVF-C 390
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ P++++YN ++ D G ++ A +L +M+K G+ D++T+N ++ G G ADA
Sbjct: 391 GVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADA 450
Query: 218 EKIWETMVNMNVR---PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPD 267
W+ ++N++ P++ +Y A + GL + +A L +M+ I P+
Sbjct: 451 ---WDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKEDGILPN 500
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 104/221 (47%), Gaps = 7/221 (3%)
Query: 79 ILEHQKQYKDISKEGFTARLIA----LYGKA--AMFENARKVFDEMPGRNCEQTVLSFNA 132
I E ++ Y+++ + ++ +YG + + A ++F M + C V++++
Sbjct: 272 ISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSI 331
Query: 133 LLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKK 192
L+ SKK + LF ++ + G+ + V+Y +I+ + G L+ A + M
Sbjct: 332 LINGYCKSKKVEHGMKLFCEMSQR-GVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFC 390
Query: 193 GIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKA 252
G+ ++IT+N LL G NG+ A I M + ++ +YN + G+ + A
Sbjct: 391 GVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADA 450
Query: 253 LELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK 293
+L + K + PD++T+ A++ G +G EA + K
Sbjct: 451 WDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRK 491
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/197 (20%), Positives = 80/197 (40%), Gaps = 3/197 (1%)
Query: 166 YNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMV 225
Y +++ + LD + L + M + + F+ LL ++ +WE M
Sbjct: 49 YREMLRNGIRYMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108
Query: 226 NMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLE 285
+ + N+ + N L+ Q AL +G+M PD+ TF +L+ GF +
Sbjct: 109 MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIY 168
Query: 286 EAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVV 342
+A +++ G N I+ ++ +C+ +D A +L R + D ++
Sbjct: 169 DALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLI 228
Query: 343 DRLAKELRVEEAKELVE 359
L R ++A +V
Sbjct: 229 SGLCNSGRWDDATRMVS 245
>gi|255660776|gb|ACU25557.1| pentatricopeptide repeat-containing protein [Verbena perennis]
Length = 418
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 109/207 (52%), Gaps = 4/207 (1%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A+ VFD + + +V+SFN L+ + DE L K+ G++PD+ +Y+ +I
Sbjct: 155 AQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRL-KNAMQASGVQPDVYTYSVLI 213
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
+ +D AN L EM G+ + +TF TL+ G NGR A +I++ M++ ++
Sbjct: 214 NGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKLMLSQSLS 273
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA--- 287
P++ +YN + GL + K+A +L+ EM K + PD T+ LI G EG+LE A
Sbjct: 274 PDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEY 333
Query: 288 KRWYNKSGCGMNKAIFKLLVPFVCEKG 314
++ K ++ + L+ +C++G
Sbjct: 334 RKRMIKENIRLDDVAYTALISGLCQEG 360
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 82/173 (47%), Gaps = 1/173 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K + A +++ M ++ ++++N L+ + L ++ K
Sbjct: 247 LIDGHCKNGRVDLAMEIYKLMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMK- 305
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD ++Y T+I +G L++A M K+ IRLD + + L+ G GR DA
Sbjct: 306 GLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDA 365
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
EK+ M+++ ++P + +Y ++ + +L+ EM+ P V T
Sbjct: 366 EKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
Length = 897
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 123/278 (44%), Gaps = 39/278 (14%)
Query: 118 MPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKG 177
M GR E V+ FN ++G C+ K E L++ + K G +PD +Y+ ++ G
Sbjct: 286 MLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLK-GCQPDAHTYSILMHGLCKLG 344
Query: 178 SLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYN 237
+ SA LL EMEKKG +++T+ +L F NG + D + E M + N + YN
Sbjct: 345 RIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYN 404
Query: 238 ARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK--------- 288
+ L + + +A+ L+ EMRS+ NPD+ ++ +I N +EEA+
Sbjct: 405 GMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEE 464
Query: 289 --------------------RWYNK---------SGCGMNKAIFKLLVPFVCEKGDLDFA 319
RW + GC ++ + L+ +C+ G++D +
Sbjct: 465 GVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRS 524
Query: 320 FNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
L + + + +++ L KE RV +A EL
Sbjct: 525 LVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALEL 562
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 121/253 (47%), Gaps = 12/253 (4%)
Query: 87 KDISKEGFTARLIAL------YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNS 140
+++ K+GF ++ + K M+++ R + +EM + +N ++ A
Sbjct: 354 REMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKD 413
Query: 141 KKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLIT 200
+ DE GL +++ G PD+ SYNTII + ++ A + + ++G+ + IT
Sbjct: 414 GRMDEAMGLIQEM-RSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGIT 472
Query: 201 FNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMR 260
+NT++ +GR+ DA ++ + M+ +V SYN + + + ++L L+ EM
Sbjct: 473 YNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMA 532
Query: 261 SKEINPDVFTFYALIKGFVNE----GNLEEAKRWYNKSGCGMNKAIFKLLVPFVCEKGDL 316
K I P+ ++ LI E LE +K+ N+ G + + L+ +C+ G +
Sbjct: 533 EKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQ-GLAPDIVTYNTLINGLCKMGWM 591
Query: 317 DFAFNLCKRTFSE 329
A NL ++ +E
Sbjct: 592 HAALNLLEKLHNE 604
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 93/202 (46%), Gaps = 8/202 (3%)
Query: 126 TVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTL 185
T +F A + DE L + + + G PD V Y T+I A D+G + A TL
Sbjct: 158 TTFTFGVAARALCRLGRADEALALLRGM-ARHGCVPDAVLYQTVIHALCDQGGVTEAATL 216
Query: 186 LYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAI 245
L EM G D+ TF+ ++ G GR +A ++ + M+ P V +Y L GL
Sbjct: 217 LNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCR 276
Query: 246 EKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAI 302
+Q +A ++G R E+N V F +I G + EG L EA Y GC +
Sbjct: 277 VRQADEARAMLG--RVPELN--VVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHT 332
Query: 303 FKLLVPFVCEKGDLDFAFNLCK 324
+ +L+ +C+ G + A L +
Sbjct: 333 YSILMHGLCKLGRIGSAVRLLR 354
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 112/240 (46%), Gaps = 35/240 (14%)
Query: 89 ISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDG 148
++ +G+ + AL K + A + EM + C + S+N ++ N+++ +E +
Sbjct: 398 LNSQGYNGMIYALC-KDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEH 456
Query: 149 LFKDL---------------PHKL-------------------GIEPDLVSYNTIIKAFV 174
+F++L H L G D+VSYN +IKA
Sbjct: 457 MFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMC 516
Query: 175 DKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVR 234
G++D + LL EM +KGI+ + +++N L+ R DA ++ + M+N + P++
Sbjct: 517 KDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIV 576
Query: 235 SYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS 294
+YN ++GL AL L+ ++ ++ ++PD+ T+ LI L++A N++
Sbjct: 577 TYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRA 636
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 103/230 (44%), Gaps = 4/230 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I L + A + F EM + + + L+ F ++ H
Sbjct: 322 IIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEM-HSR 380
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
I PD+++Y II F G + A L +EM KG+ D +TF L+ G+ G DA
Sbjct: 381 DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDA 440
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ M+ PNV +Y +DGL E A EL+ EM + P++FT+ +++ G
Sbjct: 441 FRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNG 500
Query: 278 FVNEGNLEEAKRW---YNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCK 324
GN+EEA + + +G + + L+ C+ G++D A + K
Sbjct: 501 LCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILK 550
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 128/281 (45%), Gaps = 16/281 (5%)
Query: 56 NTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFT-ARLIALYGKAAMFENARKV 114
+T +YT + R + ++ +DI+ + T +I+ + + A K+
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFF-YEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 408
Query: 115 FDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKL--GIEPDLVSYNTIIK 171
F EM + E ++F L+ G C K + F+ H + G P++V+Y T+I
Sbjct: 409 FHEMFCKGLEPDSVTFTELINGYC----KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLID 464
Query: 172 AFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRP 231
+G LDSAN LL+EM K G++ ++ T+N+++ G +G +A K+ +
Sbjct: 465 GLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNA 524
Query: 232 NVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR-- 289
+ +Y +D + KA E++ EM K + P + TF L+ GF G LE+ ++
Sbjct: 525 DTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLL 584
Query: 290 -WYNKSGCGMNKAIFKLLVPFVCEKGDLDFAF----NLCKR 325
W G N F LV C + +L A ++C R
Sbjct: 585 NWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSR 625
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 118/238 (49%), Gaps = 10/238 (4%)
Query: 127 VLSFNALL-GACVNSKKFDEVDGLFK--DLPHKLGIEPDLVSYNTIIKAFVDKGSLDSAN 183
V+S++ ++ G C +F E+D ++K ++ + G++P+ Y +II L A
Sbjct: 281 VISYSTVVNGYC----RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAE 336
Query: 184 TLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
EM ++GI D + + TL+ GF G A K + M + ++ P+V +Y A + G
Sbjct: 337 EAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGF 396
Query: 244 AIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNK 300
+A +L EM K + PD TF LI G+ G++++A R +N ++GC N
Sbjct: 397 CQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNV 456
Query: 301 AIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
+ L+ +C++GDLD A L + + +V+ L K +EEA +LV
Sbjct: 457 VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV 514
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 93/188 (49%), Gaps = 3/188 (1%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K ++A ++ EM + + ++N+++ S +E L + G+ D
Sbjct: 468 KEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF-EAAGLNADT 526
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
V+Y T++ A+ G +D A +L EM KG++ ++TFN L+ GF +G D EK+
Sbjct: 527 VTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 586
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M+ + PN ++N+ + I K A + +M S+ + PD T+ L+KG N
Sbjct: 587 MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARN 646
Query: 284 LEEAKRWY 291
++EA W+
Sbjct: 647 MKEA--WF 652
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 115/256 (44%), Gaps = 11/256 (4%)
Query: 106 AMFENARKVFDEMPGRNCEQTVLSFNALLGACV-NSKKFDEVDGLFKDLPHKLGIEPDLV 164
+ AR+VF++M +V S N L + K +F++ P ++G+ ++
Sbjct: 189 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFP-EVGVCWNVA 247
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW--- 221
SYN +I G + A+ LL ME KG D+I+++T++ G+ RF + +K+W
Sbjct: 248 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGY---CRFGELDKVWKLI 304
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
E M ++PN Y + + L + +A E EM + I PD + LI GF
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 364
Query: 282 GNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPL 338
G++ A +++ + + + ++ C+ GD+ A L F + D
Sbjct: 365 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 424
Query: 339 QLVVDRLAKELRVEEA 354
+++ K +++A
Sbjct: 425 TELINGYCKAGHMKDA 440
>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
Length = 443
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 139/305 (45%), Gaps = 18/305 (5%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYG-------KAAMFENAR 112
YT V LA K+ + ++E I+ G T IA Y K E A
Sbjct: 37 YTTIVDWLAKNKKIQEAVALMEK------ITANGCTPT-IATYNALLNGLCKMGRLEEAI 89
Query: 113 KVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKA 172
+ ++ C V+++ +L+ K+ E LFK++ + G+ D V Y +I+
Sbjct: 90 DLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASR-GLALDTVCYTALIRG 148
Query: 173 FVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPN 232
+ G + A+++ M +G D++T +T++ G GR A +I+++M + PN
Sbjct: 149 LLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPN 208
Query: 233 VRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN 292
Y+A + GL ++ ALE++ +M+ PD T+ LI G G++ A+ +++
Sbjct: 209 EVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFD 268
Query: 293 ---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKEL 349
++GC + + +L+ C+ G+ D A + S RC + ++ L K
Sbjct: 269 EMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRR 328
Query: 350 RVEEA 354
++ +A
Sbjct: 329 QLTKA 333
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 128/306 (41%), Gaps = 18/306 (5%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
S+I G+ K+ FK+ + G +T YT ++ L A + I +
Sbjct: 109 SLIDGLGKKKRSFEAYKLFKEMASRG-LALDTVCYTALIRGLLQAGK------IPQASSV 161
Query: 86 YKDISKEGFTARLIAL------YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
YK ++ +G ++ L KA A ++F M R + ++AL+
Sbjct: 162 YKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCK 221
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
++K D + + K PD ++YN +I G + +A EM + G + D+
Sbjct: 222 ARKMDCALEMLAQM-KKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVY 280
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
T+N L+ GF G A +++ M + PNV +Y + GL +Q KA M
Sbjct: 281 TYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHM 340
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDL 316
+ + PD F + +L+ G G LE ++ +SG N L+ +C+ +
Sbjct: 341 KERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVA-NSQTRTRLIFHLCKANRV 399
Query: 317 DFAFNL 322
D A +L
Sbjct: 400 DEAVSL 405
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 93/204 (45%), Gaps = 3/204 (1%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G D+ +Y TI+ + A L+ ++ G + T+N LL G GR +A
Sbjct: 29 GCTIDIHTYTTIVDWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEA 88
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ +V+ P+V +Y + +DGL +K++ +A +L EM S+ + D + ALI+G
Sbjct: 89 IDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRG 148
Query: 278 FVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
+ G + +A Y GC + ++ +C+ G + A + K + +
Sbjct: 149 LLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPN 208
Query: 335 QAPLQLVVDRLAKELRVEEAKELV 358
+ ++ L K +++ A E++
Sbjct: 209 EVVYSALIHGLCKARKMDCALEML 232
>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
Length = 913
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 123/278 (44%), Gaps = 39/278 (14%)
Query: 118 MPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKG 177
M GR E V+ FN ++G C+ K E L++ + K G +PD +Y+ ++ G
Sbjct: 302 MLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLK-GCQPDAHTYSILMHGLCKLG 360
Query: 178 SLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYN 237
+ SA LL EMEKKG +++T+ +L F NG + D + E M + N + YN
Sbjct: 361 RIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYN 420
Query: 238 ARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK--------- 288
+ L + + +A+ L+ EMRS+ NPD+ ++ +I N +EEA+
Sbjct: 421 GMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEE 480
Query: 289 --------------------RWYNK---------SGCGMNKAIFKLLVPFVCEKGDLDFA 319
RW + GC ++ + L+ +C+ G++D +
Sbjct: 481 GVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRS 540
Query: 320 FNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
L + + + +++ L KE RV +A EL
Sbjct: 541 LVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALEL 578
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 121/253 (47%), Gaps = 12/253 (4%)
Query: 87 KDISKEGFTARLIAL------YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNS 140
+++ K+GF ++ + K M+++ R + +EM + +N ++ A
Sbjct: 370 REMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKD 429
Query: 141 KKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLIT 200
+ DE GL +++ G PD+ SYNTII + ++ A + + ++G+ + IT
Sbjct: 430 GRMDEAMGLIQEM-RSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGIT 488
Query: 201 FNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMR 260
+NT++ +GR+ DA ++ + M+ +V SYN + + + ++L L+ EM
Sbjct: 489 YNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMA 548
Query: 261 SKEINPDVFTFYALIKGFVNE----GNLEEAKRWYNKSGCGMNKAIFKLLVPFVCEKGDL 316
K I P+ ++ LI E LE +K+ N+ G + + L+ +C+ G +
Sbjct: 549 EKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQ-GLAPDIVTYNTLINGLCKMGWM 607
Query: 317 DFAFNLCKRTFSE 329
A NL ++ +E
Sbjct: 608 HAALNLLEKLHNE 620
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 106/231 (45%), Gaps = 9/231 (3%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRN-CEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHK 156
++++ +A +A ++ M R+ T +F A + DE L + + +
Sbjct: 145 VLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMA-R 203
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
G PD V Y T+I A D+G + A TLL EM G D+ TF+ ++ G GR +
Sbjct: 204 HGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVRE 263
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
A ++ + M+ P V +Y L GL +Q +A ++G R E+N V F +I
Sbjct: 264 AARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLG--RVPELN--VVLFNTVIG 319
Query: 277 GFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCK 324
G + EG L EA Y GC + + +L+ +C+ G + A L +
Sbjct: 320 GCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLR 370
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 112/240 (46%), Gaps = 35/240 (14%)
Query: 89 ISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDG 148
++ +G+ + AL K + A + EM + C + S+N ++ N+++ +E +
Sbjct: 414 LNSQGYNGMIYALC-KDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEH 472
Query: 149 LFKDL---------------PHKL-------------------GIEPDLVSYNTIIKAFV 174
+F++L H L G D+VSYN +IKA
Sbjct: 473 MFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMC 532
Query: 175 DKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVR 234
G++D + LL EM +KGI+ + +++N L+ R DA ++ + M+N + P++
Sbjct: 533 KDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIV 592
Query: 235 SYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS 294
+YN ++GL AL L+ ++ ++ ++PD+ T+ LI L++A N++
Sbjct: 593 TYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRA 652
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/246 (19%), Positives = 91/246 (36%), Gaps = 37/246 (15%)
Query: 149 LFKDLPHKLGIEPDLVSYNTII------------------------------------KA 172
L LP + G++P SYN ++ +A
Sbjct: 125 LLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARA 184
Query: 173 FVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPN 232
G D A LL M + G D + + T++ G +A + M+ M +
Sbjct: 185 LCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAAD 244
Query: 233 VRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN 292
V +++ + G+ + ++A LV M +K P V T+ L++G +EA+
Sbjct: 245 VNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLG 304
Query: 293 KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVE 352
+ +N +F ++ +G L A L + + C D +++ L K R+
Sbjct: 305 RVP-ELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIG 363
Query: 353 EAKELV 358
A L+
Sbjct: 364 SAVRLL 369
>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 529
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 109/228 (47%), Gaps = 4/228 (1%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
+NA+++F M V S+N ++ K+ DE L +++ HK + PD V+YN+
Sbjct: 272 QNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHK-NMVPDTVTYNS 330
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
+I G + SA L+ EM +G D++T+ +LL N A ++ M
Sbjct: 331 LIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERG 390
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA- 287
++P + +Y A +DGL + K A EL + K DV+T+ +I G EG +EA
Sbjct: 391 IQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEAL 450
Query: 288 --KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV 333
K +GC N F++++ + EK + D A L ++ LV
Sbjct: 451 AIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLLV 498
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 125/262 (47%), Gaps = 10/262 (3%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKL--GIE 160
K + A ++ EM R +++ L+ G C+ ++ G F L + I
Sbjct: 162 KDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCL----LGQLMGAFSLLDEMILKNIN 217
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
P + YN +I A +G++ A LL M K+GI+ ++T++TL+ G+ G +A++I
Sbjct: 218 PGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQI 277
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
+ MV M V PNV SYN ++GL K+ +A+ L+ EM K + PD T+ +LI G
Sbjct: 278 FHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCK 337
Query: 281 EGNLEEAKRWYNKS---GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAP 337
G + A N+ G + + L+ +C+ +LD A L +
Sbjct: 338 SGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYT 397
Query: 338 LQLVVDRLAKELRVEEAKELVE 359
++D L K R++ A+EL +
Sbjct: 398 YTALIDGLCKGGRLKNAQELFQ 419
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 118/244 (48%), Gaps = 10/244 (4%)
Query: 119 PGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGS 178
PG T++ L+G N+K+ +F + ++G+ P++ SYN +I
Sbjct: 253 PGVVTYSTLMDGYCLVGEVQNAKQ------IFHAMV-QMGVNPNVYSYNIMINGLCKCKR 305
Query: 179 LDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNA 238
+D A LL EM K + D +T+N+L+ G +GR A + M + +V +Y +
Sbjct: 306 VDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTS 365
Query: 239 RLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SG 295
LD L + KA L +M+ + I P ++T+ ALI G G L+ A+ + G
Sbjct: 366 LLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKG 425
Query: 296 CGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAK 355
C ++ + +++ +C++G D A + + C+ + ++++ L ++ ++A+
Sbjct: 426 CCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAE 485
Query: 356 ELVE 359
+L+
Sbjct: 486 KLLH 489
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 105/223 (47%), Gaps = 7/223 (3%)
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
KLG +PD ++ NT++K KG + + ++ +G ++D +++ TLL G G
Sbjct: 73 KLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETR 132
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
A K+ + + + RPNV YN +DGL +K +A +L EM ++ I PD T+ LI
Sbjct: 133 CAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLI 192
Query: 276 KGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCL 332
GF G L A ++ I+ +L+ +C++G++ A NL E
Sbjct: 193 YGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIK 252
Query: 333 VDQAPLQLVVDRLAKELRVEEAKE----LVELGKTNSYCRYNL 371
++D V+ AK+ +V++G + YN+
Sbjct: 253 PGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNI 295
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 99/242 (40%), Gaps = 46/242 (19%)
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
P ++ +N I+ + +A +L +ME KGIR + +T N L+ F G+ A + +
Sbjct: 8 PPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSV 67
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALEL------------------------- 255
++ + +P+ + N + GL ++ + KK+L
Sbjct: 68 LGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCK 127
Query: 256 VGEMRS----------KEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS---GCGMNKAI 302
+GE R + P+V + +I G + + EA Y++ G +
Sbjct: 128 IGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAIT 187
Query: 303 FKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAP----LQLVVDRLAKELRVEEAKELV 358
+ L+ C G L AF+L E L + P ++++ L KE V+EAK L+
Sbjct: 188 YTTLIYGFCLLGQLMGAFSL----LDEMILKNINPGVYIYNILINALCKEGNVKEAKNLL 243
Query: 359 EL 360
+
Sbjct: 244 AV 245
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K +NA+++F + + C V ++ ++ FDE + + G P+
Sbjct: 407 KGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDN-GCIPNA 465
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGI 194
V++ II++ +K D A LL+EM KG+
Sbjct: 466 VTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 496
>gi|357127305|ref|XP_003565323.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Brachypodium distachyon]
Length = 746
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 146/332 (43%), Gaps = 20/332 (6%)
Query: 7 LLSCSFSTTATATGPKFIGSVIRGIYKENNLKRLV-DKFKKSSDLGRFRTNTGIYTGTVQ 65
LL C S+ ++ +R +++ +LV DKF Y+ V
Sbjct: 277 LLKCVCSSLVPRNHQLYLELALRVVHRSIPAWKLVPDKFT--------------YSTVVS 322
Query: 66 RLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQ 125
LA+A R ++ ++ E F L A+ + A K+F M + C
Sbjct: 323 ALADAGRVDDAVALVHEMVVDGVVAAEAFNPVLGAML-RTGDVTGAAKLFSFMQLKGCAP 381
Query: 126 TVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTL 185
+ ++N LL + + G+ + + + + P +++Y ++ V G L+ A +
Sbjct: 382 SAATYNVLLHGLLLCGRAKAAMGVMRRM-ERAEVVPGVMTYGAVVDGLVRCGRLEDACKV 440
Query: 186 LYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAI 245
+ EM KG+ + F+ ++ GF G A ++W+TMV ++PNV Y+A +DGLA
Sbjct: 441 IEEMRSKGLVPNEFVFSPVITGFCKLGEVDRASRVWDTMVAAGIKPNVVLYSAMIDGLAR 500
Query: 246 EKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAI 302
+ +A L EM + P++ T+ ++++G+ G+ +A ++ + GC N
Sbjct: 501 CGKMTEAELLFREMIEAKCVPNIMTYSSMVRGYFQIGDSSQALSFWEDMLRIGCTPNAVT 560
Query: 303 FKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
+ +L+ +C G A + K C+ D
Sbjct: 561 YSVLINGLCNVGRSKDAMMVWKHMLGRGCVPD 592
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 90/187 (48%), Gaps = 7/187 (3%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFK--DLPHKLGIEPDLV 164
E+A KV +EM + F+ ++ G C K EVD + D GI+P++V
Sbjct: 434 LEDACKVIEEMRSKGLVPNEFVFSPVITGFC----KLGEVDRASRVWDTMVAAGIKPNVV 489
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
Y+ +I G + A L EM + +++T+++++ G++ G + A WE M
Sbjct: 490 LYSAMIDGLARCGKMTEAELLFREMIEAKCVPNIMTYSSMVRGYFQIGDSSQALSFWEDM 549
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
+ + PN +Y+ ++GL ++K A+ + M + PD + ++IKGF G +
Sbjct: 550 LRIGCTPNAVTYSVLINGLCNVGRSKDAMMVWKHMLGRGCVPDTIAYTSMIKGFCVSGMV 609
Query: 285 EEAKRWY 291
+ R +
Sbjct: 610 DAGLRLF 616
Score = 44.7 bits (104), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 72/170 (42%), Gaps = 20/170 (11%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
++A V+ M GR C +++ +++ G CV S D LF D+ + PD++ YN
Sbjct: 575 KDAMMVWKHMLGRGCVPDTIAYTSMIKGFCV-SGMVDAGLRLFYDMLARGDTHPDVICYN 633
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
++ + L A LL +M + D +T NT L +K E + +
Sbjct: 634 VLLDGLLRAKDLPRAMDLLNQMLDQACDPDTVTCNTFL------REIEVGQKGQEFLEGL 687
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
VR L K+ K A E++ M +K I P+ +++G
Sbjct: 688 VVR------------LCNRKRNKAAGEVLMVMLAKYIVPEAAVLEMVVRG 725
>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
Length = 762
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 97/190 (51%), Gaps = 1/190 (0%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K + A ++ EM + E ++N+L+ + D+ D+ G++PD+
Sbjct: 481 KQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADM-DAAGLKPDV 539
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
+Y T+I A G LD A+ LL EM GI+ ++T+N L+ GF +GR +K+ E
Sbjct: 540 YTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEW 599
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M+ N+ PN +YN+ + I K E+ M S+ + P+ T+ LIKG +
Sbjct: 600 MLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARS 659
Query: 284 LEEAKRWYNK 293
++EA+ ++N+
Sbjct: 660 MKEAQYFHNE 669
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 141/342 (41%), Gaps = 42/342 (12%)
Query: 56 NTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVF 115
N Y ++ L A R ++ + D+ G LI Y ENA K+
Sbjct: 261 NVCSYNILLKVLCGAGRVEDARQLFDEMASPPDVVTYGI---LIHGYCALGELENAVKLL 317
Query: 116 DEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVD 175
D+M R E + +++ + + + + +D+ H I + V Y T++ F +
Sbjct: 318 DDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAV-YTTVLSGFCN 376
Query: 176 KGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWE------------- 222
KG L SA EM++KG+ D +T+ TL+ G G +AEK+ +
Sbjct: 377 KGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVT 436
Query: 223 ----------------------TMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMR 260
TMV V PNV +Y A DGL + + A EL+ EM
Sbjct: 437 YTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMS 496
Query: 261 SKEINPDVFTFYALIKGFVNEGNLEEAKRW---YNKSGCGMNKAIFKLLVPFVCEKGDLD 317
+K + + T+ +LI G G L++A R + +G + + L+ +C+ G+LD
Sbjct: 497 NKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELD 556
Query: 318 FAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
A +L + ++++ RVE K+L+E
Sbjct: 557 RAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLE 598
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 112/272 (41%), Gaps = 6/272 (2%)
Query: 56 NTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFT-ARLIALYGKAAMFENARKV 114
N YT L + E+L H+ K + T LI KA + A +
Sbjct: 468 NVVTYTALSDGLCKQGDVQAANELL-HEMSNKGLELNACTYNSLINGLCKAGYLDQAMRT 526
Query: 115 FDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFV 174
+M + V ++ L+ A S + D L +++ GI+P +V+YN ++ F
Sbjct: 527 MADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDN-GIKPTIVTYNVLMNGFC 585
Query: 175 DKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVR 234
G ++ LL M +K I + T+N+L+ + +I++ M + NV PN
Sbjct: 586 MSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNEN 645
Query: 235 SYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN-- 292
+YN + G + K+A EM K ++ ALI+ + EA++ ++
Sbjct: 646 TYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDM 705
Query: 293 -KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLC 323
K G ++ + F + +L+ LC
Sbjct: 706 RKEGFTAEPDVYNFYIDFNFNEDNLEATLALC 737
>gi|255542890|ref|XP_002512508.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548469|gb|EEF49960.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 444
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 131/254 (51%), Gaps = 13/254 (5%)
Query: 126 TVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTL 185
+V S N L+ V K + D + K++ GI P+ V++N +I F + ++ A +
Sbjct: 182 SVTSCNPLMSGLV---KMYKADAILKEMKAD-GICPNEVTFNILIDGFCNDKNVSVAMKV 237
Query: 186 LYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAI 245
EM ++G++ +++T+N+L+ G +NG+ +A + + MVN + PN+ ++NA L+G
Sbjct: 238 FAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATTLRDQMVNSCLEPNIITHNALLNGFCK 297
Query: 246 EKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAI 302
K K+A EL +M + I P+V T+ LI + + N+E+A Y G + +
Sbjct: 298 NKMVKQAGELFEDMPKQRITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVYPDVST 357
Query: 303 FKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGK 362
+ L+ +C KGDL+ A N ++ D +++D L + +++ L++
Sbjct: 358 YNCLIVGLCRKGDLEGARNRVSEMDTKHLKADLITYNILMDSLCNKGEMKKTLRLLD--- 414
Query: 363 TNSYCRYNLKFPSE 376
C+ LK PS+
Sbjct: 415 --EMCKKGLK-PSQ 425
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 89/176 (50%), Gaps = 1/176 (0%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A + D+M E +++ NALL +K + LF+D+P K I P++ +YN +I
Sbjct: 269 ATTLRDQMVNSCLEPNIITHNALLNGFCKNKMVKQAGELFEDMP-KQRITPNVTTYNILI 327
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
A+ +++ A L M KG+ D+ T+N L++G G A M +++
Sbjct: 328 DAYCKDENMEDAFALYRIMLGKGVYPDVSTYNCLIVGLCRKGDLEGARNRVSEMDTKHLK 387
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEE 286
++ +YN +D L + + KK L L+ EM K + P T+ +I G+ EGNL +
Sbjct: 388 ADLITYNILMDSLCNKGEMKKTLRLLDEMCKKGLKPSQLTYNTMIDGYSKEGNLRQ 443
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 91/179 (50%), Gaps = 1/179 (0%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A KVF EM + + V+++N+L+ N+ K +E L +D +EP+++++N ++
Sbjct: 234 AMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATTL-RDQMVNSCLEPNIITHNALL 292
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
F + A L +M K+ I ++ T+N L+ + + DA ++ M+ V
Sbjct: 293 NGFCKNKMVKQAGELFEDMPKQRITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVY 352
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
P+V +YN + GL + + A V EM +K + D+ T+ L+ N+G +++ R
Sbjct: 353 PDVSTYNCLIVGLCRKGDLEGARNRVSEMDTKHLKADLITYNILMDSLCNKGEMKKTLR 411
>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 646
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 136/331 (41%), Gaps = 41/331 (12%)
Query: 34 ENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEG 93
+N L FK G ++ + ++ A ++ F +I ++L+ K+ + E
Sbjct: 42 QNELSISPQIFKSRPQFGSYKLGDATFYRLIENYATSREFHFIHQVLDRMKREGRVLTET 101
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGR-NCEQTVLSFNALLGACVNSKKFDEVDGLFKD 152
+ GKA + A F M +C+QTV SFN++L + F FK
Sbjct: 102 IFILIFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYA---FKF 158
Query: 153 LPHKLG-----IEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLG 207
H G +P+L++YN IIKA G +D A EM K D+ T++TL+ G
Sbjct: 159 YLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNG 218
Query: 208 FYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPD 267
R +A + + M PN ++N +D L+ +A +LV M K P+
Sbjct: 219 LCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPN 278
Query: 268 VFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTF 327
T+ LI G +C KG LD A +L ++
Sbjct: 279 EVTYNTLIHG--------------------------------LCLKGKLDKALSLLEKMV 306
Query: 328 SERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
S +C+ +Q +++ L K+ R E+ ++
Sbjct: 307 SSKCVPNQVTYGTIINGLVKQRRAEDGVHIL 337
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 137/306 (44%), Gaps = 5/306 (1%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
+I+ + K + R VD F++ L + Y+ + L +R +L+ +
Sbjct: 180 IIKALCKLGQIDRAVDTFREMP-LKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAE 238
Query: 87 KDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEV 146
+ LI K A K+ D M + C +++N L+ K D+
Sbjct: 239 GCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKA 298
Query: 147 DGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLL 206
L + + + P+ V+Y TII V + + +L ME++G + + +++L+
Sbjct: 299 LSLLEKMVSSKCV-PNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLIS 357
Query: 207 GFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINP 266
G + G+ +A ++W+ M +PNV Y A +DGL +++ +A +++ EM SK P
Sbjct: 358 GLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLP 417
Query: 267 DVFTFYALIKGFVNEGNLEEAKR-WYNKSGCGM--NKAIFKLLVPFVCEKGDLDFAFNLC 323
+ FT+ +L+KGF +G+ ++A W M N +L+ +CE G L A +
Sbjct: 418 NAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVW 477
Query: 324 KRTFSE 329
E
Sbjct: 478 THMLGE 483
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/327 (21%), Positives = 135/327 (41%), Gaps = 18/327 (5%)
Query: 40 LVDKFKKSSDLGRFR------------TNTGIYTGTVQRLANAKRFRWIEEILEHQKQYK 87
L+D K+ DL R N Y + L + +LE K
Sbjct: 250 LIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSK 309
Query: 88 DISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVD 147
+ + +I K E+ + M R + +++L+ K +
Sbjct: 310 CVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAV 369
Query: 148 GLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLG 207
L+K++ K G +P++V Y I D A +L EM KG + T+++L+ G
Sbjct: 370 RLWKEMAEK-GCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKG 428
Query: 208 FYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPD 267
F+ G A +W+ M++ ++R NV + L+GL + ++AL + M + + PD
Sbjct: 429 FFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPD 488
Query: 268 VFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKA-----IFKLLVPFVCEKGDLDFAFNL 322
V + ++IKG + G++++ + + + C K+ + +L +C + +L A +L
Sbjct: 489 VVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDL 548
Query: 323 CKRTFSERCLVDQAPLQLVVDRLAKEL 349
E C D + ++ L + +
Sbjct: 549 LNSMLDEGCDPDSLTCNIFLETLRERI 575
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 109/268 (40%), Gaps = 39/268 (14%)
Query: 97 RLIALYGKAAMFENARKVFDEMP--GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLP 154
RLI Y + F +V D M GR +T+ F + AC + E F +
Sbjct: 70 RLIENYATSREFHFIHQVLDRMKREGRVLTETI--FILIFKACGKAHLPGEAVNFFHRMA 127
Query: 155 HKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRF 214
+ L + + S+N+++ + +G A F L F +N +
Sbjct: 128 NDLHCKQTVKSFNSVLNVIIQEGDFSYA------------------FKFYLHVFGANSK- 168
Query: 215 ADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYAL 274
+PN+ +YN + L Q +A++ EM K NPDVFT+ L
Sbjct: 169 -------------GFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTL 215
Query: 275 IKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERC 331
+ G E ++EA ++ GC N F +L+ + + GDL A L F + C
Sbjct: 216 MNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGC 275
Query: 332 LVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ ++ ++ L + ++++A L+E
Sbjct: 276 VPNEVTYNTLIHGLCLKGKLDKALSLLE 303
>gi|255660808|gb|ACU25573.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
Length = 418
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 141/313 (45%), Gaps = 4/313 (1%)
Query: 5 SRLLSCSFSTTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTV 64
S + + T T ++ S + Y E+ R + + + +FR +
Sbjct: 49 SAVFAAJLETKGTQISDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVJ 108
Query: 65 QRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCE 124
+ L K F+ + E + + F L+ + K A+ VFD +
Sbjct: 109 EHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLR 168
Query: 125 QTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANT 184
+V+SFN L+ + DE L K+ G++PD+ +Y+ +I + +D AN
Sbjct: 169 PSVVSFNTLMNGYIKLGDLDEGFRL-KNXMQASGVQPDVYTYSVLINGLCKESKMDDANE 227
Query: 185 LLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLA 244
L EM G+ + +TF TL+ G NGR A +I++ M++ ++ P++ +YN + GL
Sbjct: 228 LFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLC 287
Query: 245 IEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA---KRWYNKSGCGMNKA 301
+ K+A +L EM K + PD T+ LI G EG+LE A ++ K ++
Sbjct: 288 KKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDV 347
Query: 302 IFKLLVPFVCEKG 314
+ L+ +C++G
Sbjct: 348 AYTALISGLCQEG 360
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 83/173 (47%), Gaps = 1/173 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K + A +++ +M ++ ++++N L+ + L ++ K
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMK- 305
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD ++Y T+I +G L++A M K+ IRLD + + L+ G GR DA
Sbjct: 306 GLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDA 365
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
EK+ M+++ ++P + +Y ++ + +L+ EM+ P V T
Sbjct: 366 EKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418
>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
Length = 578
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 119/237 (50%), Gaps = 6/237 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI Y K + A +VF+EM + +V+++N+L+ + K +E L +++ L
Sbjct: 270 LINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEM-EDL 328
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ P+ +++ ++K F KG + AN + M ++ + D++ + L+ G+ G+ DA
Sbjct: 329 GLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDA 388
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ E M + PNV +YN + G + + A L+ EM+ K I DV T+ LI
Sbjct: 389 MAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGA 448
Query: 278 FVNEGNLEEAKRWYNKS---GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERC 331
+G + +A + ++ G N + ++ C+KG++ A+ + RT E+C
Sbjct: 449 LCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEI--RTRMEKC 503
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 104/224 (46%), Gaps = 6/224 (2%)
Query: 103 GKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEP 161
G A + + EM T ++F L+ G C NS V +F+++ + GI
Sbjct: 240 GGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVR-VFEEMKQQ-GIAA 297
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
+V+YN++I +G ++ L+ EME G+ + ITF +L GF G ADA
Sbjct: 298 SVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWI 357
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
+ M NV P+V Y +DG + + A+ + M K I+P+V T+ LI GF
Sbjct: 358 DGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRS 417
Query: 282 GNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
G+ A + + G + + +L+ +C KG++ A L
Sbjct: 418 GDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKL 461
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 124/279 (44%), Gaps = 14/279 (5%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFR---TNTGIYTGTVQRLANAKRFRWIEEILEH 82
S+I G+ E ++ V ++ DLG T + G ++ A WI+ + E
Sbjct: 304 SLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTER 363
Query: 83 QKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKK 142
+ + LI Y + E+A V + M + V ++N L+ S
Sbjct: 364 NVEPDVV----IYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGD 419
Query: 143 FDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFN 202
+ GL ++ K GIE D+V+YN +I A KG + A LL EM + G+ + +T+N
Sbjct: 420 WRSASGLLDEMKEK-GIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYN 478
Query: 203 TLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
T++ GF G A +I M R NV +YN + + +A +L+ EM K
Sbjct: 479 TIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDK 538
Query: 263 EINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKA 301
+ P+ T+ + +G + +G + + GC +++A
Sbjct: 539 CLVPNGITYETIKEGMMEKGYTPDIR------GCTVSQA 571
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 88/202 (43%), Gaps = 39/202 (19%)
Query: 129 SFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSA------ 182
S NALL V +K+ D + F+ + + PD+ ++NT+I G L A
Sbjct: 158 SVNALLAGLVGAKRVDLAEKAFRSALRRR-VSPDIYTFNTVISGLCRIGQLRKAGDVAKD 216
Query: 183 --------------------------------NTLLYEMEKKGIRLDLITFNTLLLGFYS 210
+ LL EM + GI +TF L+ G+
Sbjct: 217 IKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCK 276
Query: 211 NGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
N A A +++E M + +V +YN+ + GL E + ++ ++L+ EM ++P+ T
Sbjct: 277 NSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEIT 336
Query: 271 FYALIKGFVNEGNLEEAKRWYN 292
F ++KGF +G + +A W +
Sbjct: 337 FGCVLKGFCKKGMMADANDWID 358
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 69/168 (41%), Gaps = 6/168 (3%)
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
P S N ++ V +D A ++ + D+ TFNT++ G G+ A +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALE---LVGEMRSKEINPDVFTFYALIKG 277
+ + + P+V +YN+ +DG + L+ EM I+P TF LI G
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273
Query: 278 FVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
+ N A R + + G + + L+ +C +G ++ L
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKL 321
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 74/166 (44%), Gaps = 6/166 (3%)
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
+ N LL G R AEK + + + V P++ ++N + GL Q +KA ++ ++
Sbjct: 158 SVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDI 217
Query: 260 RSKEINPDVFTFYALIKGFVNEG------NLEEAKRWYNKSGCGMNKAIFKLLVPFVCEK 313
++ + P V T+ +LI G+ +G +++ + ++G F +L+ C+
Sbjct: 218 KAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKN 277
Query: 314 GDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ A + + + ++ L E +VEE +L+E
Sbjct: 278 SNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLME 323
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 11/92 (11%)
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA-- 287
RP+ S NA L GL K+ A + + ++PD++TF +I G G L +A
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212
Query: 288 -----KRWYNKSGCGMNKAIFKLLVPFVCEKG 314
K W G + A + L+ C+KG
Sbjct: 213 VAKDIKAW----GLAPSVATYNSLIDGYCKKG 240
>gi|255660790|gb|ACU25564.1| pentatricopeptide repeat-containing protein [Verbena hispida]
Length = 418
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 133/272 (48%), Gaps = 24/272 (8%)
Query: 66 RLANAKRFR----WIEEILEHQKQ----------YKDISKEGFTARL----IALYG--KA 105
RL +FR ++LEH + Y++ + G+ A L I ++G K
Sbjct: 90 RLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEENLECGYPASLYFFNILMHGFVKE 149
Query: 106 AMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVS 165
A+ VFD + +V+SFN L+ + +E L K+ G++PD+ +
Sbjct: 150 GEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRL-KNAMQASGVQPDVYT 208
Query: 166 YNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMV 225
Y+ +I + +D AN L EM KG+ + +TF TL+ G NGR A +I++ M+
Sbjct: 209 YSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML 268
Query: 226 NMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLE 285
+ ++ P++ +YN + GL + K+A +L+ EM K + PD T+ LI G EG+LE
Sbjct: 269 SQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLE 328
Query: 286 EA---KRWYNKSGCGMNKAIFKLLVPFVCEKG 314
A ++ K ++ + L+ +C++G
Sbjct: 329 TAFEYRKRMIKENIRLDDVAYTALISGLCQEG 360
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 83/173 (47%), Gaps = 1/173 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K + A +++ +M ++ ++++N L+ + L ++ K
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMK- 305
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD ++Y T+I +G L++A M K+ IRLD + + L+ G GR DA
Sbjct: 306 GLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDA 365
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
EK+ M+++ ++P + +Y ++ + +L+ EM+ P V T
Sbjct: 366 EKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYKPSVVT 418
>gi|224125420|ref|XP_002329801.1| predicted protein [Populus trichocarpa]
gi|222870863|gb|EEF07994.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 119/271 (43%), Gaps = 37/271 (13%)
Query: 53 FRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENAR 112
FR + + + +L +A FR EE+L K+ K E + YG+ M +A
Sbjct: 46 FRHDHTTFGVMISKLVSANEFRPAEEMLNRMKEEKCRITEEIFLSICRGYGRVHMPLDAI 105
Query: 113 KVFDEMPGRNCE-----------------------------------QTVLSFNALLGA- 136
+VF +M C+ Q+V+S N L+ A
Sbjct: 106 RVFHKMNDFGCKPTDKSYISVFAILVEENQLKVAMSFYKYMREMGVRQSVVSLNVLIKAL 165
Query: 137 CVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRL 196
C NS D +F+++P K G +PD +Y T+I G A L EM+ KG
Sbjct: 166 CKNSGTIDAAFEIFREMP-KRGCDPDSYTYGTLINGLCKLGKTFEAKELFKEMDTKGCSP 224
Query: 197 DLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELV 256
++T++ L+ G G +A +++ M + PNV +Y++ +DGL + +A+EL+
Sbjct: 225 SVVTYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCKNGGSLEAMELL 284
Query: 257 GEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
M K P++ T+ LI G EG L EA
Sbjct: 285 EMMVRKRHKPNMVTYSTLINGLCKEGKLAEA 315
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 119/234 (50%), Gaps = 13/234 (5%)
Query: 100 ALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLG 158
AL + + A ++F EMP R C+ ++ L+ G C K F E LFK++ K G
Sbjct: 164 ALCKNSGTIDAAFEIFREMPKRGCDPDSYTYGTLINGLCKLGKTF-EAKELFKEMDTK-G 221
Query: 159 IEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAE 218
P +V+Y+ ++ G++D A L +M+KK I ++ T+++L+ G NG +A
Sbjct: 222 CSPSVVTYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCKNGGSLEAM 281
Query: 219 KIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGF 278
++ E MV +PN+ +Y+ ++GL E + +A+E + M+ + + PD + +I GF
Sbjct: 282 ELLEMMVRKRHKPNMVTYSTLINGLCKEGKLAEAVETLDRMKLQGLKPDAGLYGKIINGF 341
Query: 279 VNEGNLEEAKRWYNKSGCGM---NKAIFKLLVPF-------VCEKGDLDFAFNL 322
N +EA + ++ G N+ + L V +C G+L+ +F L
Sbjct: 342 CNIRKFQEAATYLDEMVLGQISPNRVTWSLHVKLNNMVVQGLCTNGNLNRSFQL 395
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 123/245 (50%), Gaps = 19/245 (7%)
Query: 80 LEHQKQYKDISKEGFTARLIA----LYG--KAAMFENARKVFDEMPGRNCEQTVLSFNAL 133
E ++ +K++ +G + ++ ++G +A + A +FD+M + E V ++++L
Sbjct: 208 FEAKELFKEMDTKGCSPSVVTYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYSSL 267
Query: 134 L-GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKK 192
+ G C N + ++ L ++ + +P++V+Y+T+I +G L A L M+ +
Sbjct: 268 MDGLCKNGGSLEAMELL--EMMVRKRHKPNMVTYSTLINGLCKEGKLAEAVETLDRMKLQ 325
Query: 193 GIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPN-------VRSYNARLDGLAI 245
G++ D + ++ GF + +F +A + MV + PN V+ N + GL
Sbjct: 326 GLKPDAGLYGKIINGFCNIRKFQEAATYLDEMVLGQISPNRVTWSLHVKLNNMVVQGLCT 385
Query: 246 EKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAI 302
++ +L MR++ I+ D TF +L+K F +G+L +A R +++ GC + I
Sbjct: 386 NGNLNRSFQLYIGMRTRGISIDAGTFDSLVKCFCKKGDLHKAARIFDEMVLDGCVPDHGI 445
Query: 303 FKLLV 307
+ +V
Sbjct: 446 WSAVV 450
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 81/206 (39%), Gaps = 4/206 (1%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G D ++ +I V A +L M+++ R+ F ++ G+ DA
Sbjct: 45 GFRHDHTTFGVMISKLVSANEFRPAEEMLNRMKEEKCRITEEIFLSICRGYGRVHMPLDA 104
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+++ M + +P +SY + L E Q K A+ MR + V + LIK
Sbjct: 105 IRVFHKMNDFGCKPTDKSYISVFAILVEENQLKVAMSFYKYMREMGVRQSVVSLNVLIKA 164
Query: 278 FV-NEGNLE---EAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV 333
N G ++ E R K GC + + L+ +C+ G A L K ++ C
Sbjct: 165 LCKNSGTIDAAFEIFREMPKRGCDPDSYTYGTLINGLCKLGKTFEAKELFKEMDTKGCSP 224
Query: 334 DQAPLQLVVDRLAKELRVEEAKELVE 359
++ L + V+EA L +
Sbjct: 225 SVVTYSCLMHGLCQAGNVDEAMGLFD 250
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 47/241 (19%), Positives = 101/241 (41%), Gaps = 17/241 (7%)
Query: 27 VIRGIYKENNLKR---LVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQ 83
++ G+ + N+ L DK KK + T + + G + + + +E ++ +
Sbjct: 232 LMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCKNGGSLEAMELLEMMVRKR 291
Query: 84 KQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKF 143
+ ++ + LI K A + D M + + + ++ N +KF
Sbjct: 292 HKPNMVT----YSTLINGLCKEGKLAEAVETLDRMKLQGLKPDAGLYGKIINGFCNIRKF 347
Query: 144 DEVDGLFKDLPHKLG-IEPDLVSY-------NTIIKAFVDKGSLDSANTLLYEMEKKGIR 195
E ++ LG I P+ V++ N +++ G+L+ + L M +GI
Sbjct: 348 QEAATYLDEMV--LGQISPNRVTWSLHVKLNNMVVQGLCTNGNLNRSFQLYIGMRTRGIS 405
Query: 196 LDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALEL 255
+D TF++L+ F G A +I++ MV P+ ++A + G ++ ++A E
Sbjct: 406 IDAGTFDSLVKCFCKKGDLHKAARIFDEMVLDGCVPDHGIWSAVVGGFWDRRKVREAFES 465
Query: 256 V 256
+
Sbjct: 466 I 466
>gi|410109925|gb|AFV61042.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
hermannioides]
Length = 417
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 142/299 (47%), Gaps = 14/299 (4%)
Query: 86 YKDISKEGFTARL------IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
Y++I + G+ A L + + K A+ VFD + +V+S+N L+ +
Sbjct: 116 YEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIR 175
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
DE L K G++PD+ +Y+ +I + +D AN L EM KG+ + +
Sbjct: 176 LGDLDEGFRL-KSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGV 234
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
TF TL+ G NGR A +I++ M++ ++ P++ +YN + GL + K+A +L+ EM
Sbjct: 235 TFTTLIDGRCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEM 294
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLE---EAKRWYNKSGCGMNKAIFKLLVPFVCEKGDL 316
K + PD FT+ LI G EG+L+ E ++ + ++ + L+ +C++G
Sbjct: 295 SMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRS 354
Query: 317 DFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA----KELVELGKTNSYCRYNL 371
A + + S D ++++ K+ V + KE+ G S YN+
Sbjct: 355 VDAEKMLREMLSVDLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNV 413
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 82/167 (49%), Gaps = 1/167 (0%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A +++ M ++ ++++N L+ + L ++ K G++PD +Y T+I
Sbjct: 252 AMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMK-GLKPDKFTYTTLI 310
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
+G LD+A M ++ IRLD + + L+ G GR DAEK+ M++++++
Sbjct: 311 DGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVDLK 370
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
P+ +Y ++ + K +L+ EM+ P V T+ L+ G
Sbjct: 371 PDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMNG 417
>gi|297741611|emb|CBI32743.3| unnamed protein product [Vitis vinifera]
Length = 772
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 139/309 (44%), Gaps = 6/309 (1%)
Query: 21 PKFIGSVIRGI-YKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEI 79
P+F S++ + + N + F+ G FR + + ++ L A + I
Sbjct: 115 PQFDHSLVWNVLHGSRNSDHALQFFRWVERAGLFRHDRDTHLKIIEILGRASKLNHARCI 174
Query: 80 LEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
L + E LI YGKA + + + KVF +M E+T+ S++AL +
Sbjct: 175 LLDMPKKGVEWDEDLFVLLIDSYGKAGIVQESVKVFQKMKELGVERTIKSYDALFKVILR 234
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
++ F + ++ G+ P +YN +I F +++AN EM+++ I D++
Sbjct: 235 RGRYMMAKRYFNAMLNE-GVMPTCHTYNIMIWGFFLSLKVETANRFFEEMKERRISPDVV 293
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
T+NT++ G+Y + +AEK + M N+ P V SY + G + L L EM
Sbjct: 294 TYNTMINGYYRIKKMEEAEKFFVEMKGRNIEPTVISYTTMIKGYVSVGRVDDGLRLFEEM 353
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLEEA----KRWYNKSGCGMNKAIFKLLVPFVCEKGD 315
+S I P+ T+ L+ G + + EA K + + +IF L+ C+ G
Sbjct: 354 KSFGIKPNAVTYSTLLPGLCDGEKMLEAQNVVKEMVERYIAPKDNSIFMRLITCQCKAGQ 413
Query: 316 LDFAFNLCK 324
LD A ++ K
Sbjct: 414 LDAAADVLK 422
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 85/224 (37%), Gaps = 11/224 (4%)
Query: 76 IEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLG 135
++E++E KD S RLI KA + A V M + + L+
Sbjct: 385 VKEMVERYIAPKDNS---IFMRLITCQCKAGQLDAAADVLKAMIRLSIPTEAGHYGVLIE 441
Query: 136 ACVNSKKFDEVDGLFKDLPHKL-------GIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
S +D L L K +E + YN II+ + G A TL +
Sbjct: 442 NFCKSGVYDRAVKLLDKLIEKEIILRPQNSLEMESSGYNLIIEYLCNSGQTSKAETLFRQ 501
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
+ KKG++ D I FN L+ G G A +I + M V +Y ++ + +
Sbjct: 502 LMKKGVQ-DPIAFNNLIRGHSKEGAPESAFEILKIMGRREVPREADAYRLLIESFLKKGE 560
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN 292
A + M PD F ++++ +G ++ A R N
Sbjct: 561 PADAKTALDGMIENGHIPDSSLFRSVMESLFEDGRIQTASRVMN 604
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 50/275 (18%), Positives = 106/275 (38%), Gaps = 48/275 (17%)
Query: 34 ENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEG 93
+N +K +V+++ D I+ + A + ++L+ + ++ G
Sbjct: 382 QNVVKEMVERYIAPKD-------NSIFMRLITCQCKAGQLDAAADVLKAMIRLSIPTEAG 434
Query: 94 FTARLIALYGKAAMFENARKVFDEM--------PGRNCEQTVLSFNALLGACVNSKKFDE 145
LI + K+ +++ A K+ D++ P + E +N ++ NS + +
Sbjct: 435 HYGVLIENFCKSGVYDRAVKLLDKLIEKEIILRPQNSLEMESSGYNLIIEYLCNSGQTSK 494
Query: 146 VDGLFKDLPHKLGIEP----DLV-----------------------------SYNTIIKA 172
+ LF+ L K +P +L+ +Y +I++
Sbjct: 495 AETLFRQLMKKGVQDPIAFNNLIRGHSKEGAPESAFEILKIMGRREVPREADAYRLLIES 554
Query: 173 FVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPN 232
F+ KG A T L M + G D F +++ + +GR A ++ MV V+ N
Sbjct: 555 FLKKGEPADAKTALDGMIENGHIPDSSLFRSVMESLFEDGRIQTASRVMNNMVEKGVKEN 614
Query: 233 VRSYNARLDGLAIEKQTKKALELVGEMRSKEINPD 267
+ L+ L + ++AL + + + PD
Sbjct: 615 MDLVAKILEALLLRGHVEEALGRIDLLMNNGCEPD 649
>gi|255660806|gb|ACU25572.1| pentatricopeptide repeat-containing protein [Glandularia flava]
Length = 418
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 107/207 (51%), Gaps = 4/207 (1%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A+ VFD + +V+SFN L+ + DE L K+ G++PD+ +Y+ +I
Sbjct: 155 AQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRL-KNAMQASGVQPDVYTYSVLI 213
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
+ ++ AN L EM G+ + +TF TL+ G NGR A +I++ M++ ++
Sbjct: 214 NGLCKESKMEDANELFEEMLDNGLVPNGVTFTTLIDGHCKNGRVXLAMEIYKQMLSQSLS 273
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
P++ +YN + GL + K+A +L+ EM K + PD T+ LI G EG+LE A +
Sbjct: 274 PDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAXXY 333
Query: 291 YN---KSGCGMNKAIFKLLVPFVCEKG 314
K ++ + L+ +C++G
Sbjct: 334 RKRMIKENIRLDDVAYTALISGLCQEG 360
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 78/160 (48%), Gaps = 1/160 (0%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A +++ +M ++ ++++N L+ + L ++ K G++PD ++Y T+I
Sbjct: 260 AMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMK-GLKPDKITYTTLI 318
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
+G L++A M K+ IRLD + + L+ G GR DAEK+ M+++ ++
Sbjct: 319 DGSCKEGDLETAXXYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
P + +Y ++ + +L+ EM+ P V T
Sbjct: 379 PEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418
>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 670
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 136/331 (41%), Gaps = 41/331 (12%)
Query: 34 ENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEG 93
+N L FK G ++ + ++ A ++ F +I ++L+ K+ + E
Sbjct: 66 QNELSISPQIFKSRPQFGSYKLGDATFYRLIENYATSREFHFIHQVLDRMKREGRVLTET 125
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGR-NCEQTVLSFNALLGACVNSKKFDEVDGLFKD 152
+ GKA + A F M +C+QTV SFN++L + F FK
Sbjct: 126 IFILIFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYA---FKF 182
Query: 153 LPHKLG-----IEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLG 207
H G +P+L++YN IIKA G +D A EM K D+ T++TL+ G
Sbjct: 183 YLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNG 242
Query: 208 FYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPD 267
R +A + + M PN ++N +D L+ +A +LV M K P+
Sbjct: 243 LCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPN 302
Query: 268 VFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTF 327
T+ LI G +C KG LD A +L ++
Sbjct: 303 EVTYNTLIHG--------------------------------LCLKGKLDKALSLLEKMV 330
Query: 328 SERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
S +C+ +Q +++ L K+ R E+ ++
Sbjct: 331 SSKCVPNQVTYGTIINGLVKQRRAEDGVHIL 361
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 137/306 (44%), Gaps = 5/306 (1%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
+I+ + K + R VD F++ L + Y+ + L +R +L+ +
Sbjct: 204 IIKALCKLGQIDRAVDTFREMP-LKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAE 262
Query: 87 KDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEV 146
+ LI K A K+ D M + C +++N L+ K D+
Sbjct: 263 GCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKA 322
Query: 147 DGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLL 206
L + + + P+ V+Y TII V + + +L ME++G + + +++L+
Sbjct: 323 LSLLEKMVSSKCV-PNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLIS 381
Query: 207 GFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINP 266
G + G+ +A ++W+ M +PNV Y A +DGL +++ +A +++ EM SK P
Sbjct: 382 GLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLP 441
Query: 267 DVFTFYALIKGFVNEGNLEEAKR-WYNKSGCGM--NKAIFKLLVPFVCEKGDLDFAFNLC 323
+ FT+ +L+KGF +G+ ++A W M N +L+ +CE G L A +
Sbjct: 442 NAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVW 501
Query: 324 KRTFSE 329
E
Sbjct: 502 THMLGE 507
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/327 (21%), Positives = 135/327 (41%), Gaps = 18/327 (5%)
Query: 40 LVDKFKKSSDLGRFR------------TNTGIYTGTVQRLANAKRFRWIEEILEHQKQYK 87
L+D K+ DL R N Y + L + +LE K
Sbjct: 274 LIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSK 333
Query: 88 DISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVD 147
+ + +I K E+ + M R + +++L+ K +
Sbjct: 334 CVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAV 393
Query: 148 GLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLG 207
L+K++ K G +P++V Y I D A +L EM KG + T+++L+ G
Sbjct: 394 RLWKEMAEK-GCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKG 452
Query: 208 FYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPD 267
F+ G A +W+ M++ ++R NV + L+GL + ++AL + M + + PD
Sbjct: 453 FFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPD 512
Query: 268 VFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKA-----IFKLLVPFVCEKGDLDFAFNL 322
V + ++IKG + G++++ + + + C K+ + +L +C + +L A +L
Sbjct: 513 VVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDL 572
Query: 323 CKRTFSERCLVDQAPLQLVVDRLAKEL 349
E C D + ++ L + +
Sbjct: 573 LNSMLDEGCDPDSLTCNIFLETLRERI 599
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 109/268 (40%), Gaps = 39/268 (14%)
Query: 97 RLIALYGKAAMFENARKVFDEMP--GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLP 154
RLI Y + F +V D M GR +T+ F + AC + E F +
Sbjct: 94 RLIENYATSREFHFIHQVLDRMKREGRVLTETI--FILIFKACGKAHLPGEAVNFFHRMA 151
Query: 155 HKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRF 214
+ L + + S+N+++ + +G A F L F +N +
Sbjct: 152 NDLHCKQTVKSFNSVLNVIIQEGDFSYA------------------FKFYLHVFGANSK- 192
Query: 215 ADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYAL 274
+PN+ +YN + L Q +A++ EM K NPDVFT+ L
Sbjct: 193 -------------GFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTL 239
Query: 275 IKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERC 331
+ G E ++EA ++ GC N F +L+ + + GDL A L F + C
Sbjct: 240 MNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGC 299
Query: 332 LVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ ++ ++ L + ++++A L+E
Sbjct: 300 VPNEVTYNTLIHGLCLKGKLDKALSLLE 327
>gi|413939576|gb|AFW74127.1| hypothetical protein ZEAMMB73_460696 [Zea mays]
Length = 581
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 136/307 (44%), Gaps = 8/307 (2%)
Query: 67 LANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQT 126
LA + R + +H + L+ +A M AR+VFDEM T
Sbjct: 118 LAQSARPHDAVRVFDHMRARGLAPDAHACTALLTALARARMTATARRVFDEMARAGLAAT 177
Query: 127 VLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLL 186
+NA+L C+ + + + + + G+ D SYNT+I + KG A
Sbjct: 178 THVYNAMLHVCLKAGDAAQAEAIVTRM-DAAGVTLDRFSYNTVIALYCRKGMGYEAMCAR 236
Query: 187 YEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIE 246
M+K+GIR D +T+N+ + G GR +A +++ MV P+ +Y +DG
Sbjct: 237 DRMDKEGIRPDTVTWNSSIHGLCKEGRVKEAAQLFTEMVAAQATPDNVTYTTLIDGYCRA 296
Query: 247 KQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSG---CGMNKAIF 303
++A++L G M + + P V T+ A+++ +GN++E R ++ +
Sbjct: 297 GNVEEAVKLRGRMEAAGMLPGVATYNAILRKLCEDGNMKEVHRLLHEMDGRKVQADHVTC 356
Query: 304 KLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKE----LVE 359
L+ C++GD+ A + K+ ++ + ++ K ++ AKE +V+
Sbjct: 357 NTLINAYCKRGDMTSACKVKKKMMESGLQLNHFTYKALIHGFCKARELDGAKEAFFQMVD 416
Query: 360 LGKTNSY 366
G + +Y
Sbjct: 417 AGFSPNY 423
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 105/222 (47%), Gaps = 4/222 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+ + ++A +A +VFD M R + ALL A ++ +F ++ +
Sbjct: 114 LVLVLAQSARPHDAVRVFDHMRARGLAPDAHACTALLTALARARMTATARRVFDEMA-RA 172
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ YN ++ + G A ++ M+ G+ LD ++NT++ + G +A
Sbjct: 173 GLAATTHVYNAMLHVCLKAGDAAQAEAIVTRMDAAGVTLDRFSYNTVIALYCRKGMGYEA 232
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ M +RP+ ++N+ + GL E + K+A +L EM + + PD T+ LI G
Sbjct: 233 MCARDRMDKEGIRPDTVTWNSSIHGLCKEGRVKEAAQLFTEMVAAQATPDNVTYTTLIDG 292
Query: 278 FVNEGNLEEAKRWYNK-SGCGM--NKAIFKLLVPFVCEKGDL 316
+ GN+EEA + + GM A + ++ +CE G++
Sbjct: 293 YCRAGNVEEAVKLRGRMEAAGMLPGVATYNAILRKLCEDGNM 334
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 103/224 (45%), Gaps = 8/224 (3%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
+ A ++F EM +++ L+ + +E L + G+ P + +YN
Sbjct: 265 KEAAQLFTEMVAAQATPDNVTYTTLIDGYCRAGNVEEAVKLRGRM-EAAGMLPGVATYNA 323
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
I++ + G++ + LL+EM+ + ++ D +T NTL+ + G A K+ + M+
Sbjct: 324 ILRKLCEDGNMKEVHRLLHEMDGRKVQADHVTCNTLINAYCKRGDMTSACKVKKKMMESG 383
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
++ N +Y A + G ++ A E +M +P+ F L+ GF + N +
Sbjct: 384 LQLNHFTYKALIHGFCKARELDGAKEAFFQMVDAGFSPNYSVFSWLVDGFCKKNNADAVL 443
Query: 289 RWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSE 329
+ K G +KA+++ L+ +C KG +D A +R F +
Sbjct: 444 AIPDELMKRGLPPDKAVYRSLIRRLCRKGLVDQA----QRVFDQ 483
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 105/241 (43%), Gaps = 1/241 (0%)
Query: 53 FRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENAR 112
R +T + ++ L R + ++ + LI Y +A E A
Sbjct: 244 IRPDTVTWNSSIHGLCKEGRVKEAAQLFTEMVAAQATPDNVTYTTLIDGYCRAGNVEEAV 303
Query: 113 KVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKA 172
K+ M V ++NA+L EV L ++ + ++ D V+ NT+I A
Sbjct: 304 KLRGRMEAAGMLPGVATYNAILRKLCEDGNMKEVHRLLHEMDGR-KVQADHVTCNTLINA 362
Query: 173 FVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPN 232
+ +G + SA + +M + G++L+ T+ L+ GF A++ + MV+ PN
Sbjct: 363 YCKRGDMTSACKVKKKMMESGLQLNHFTYKALIHGFCKARELDGAKEAFFQMVDAGFSPN 422
Query: 233 VRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN 292
++ +DG + L + E+ + + PD + +LI+ +G +++A+R ++
Sbjct: 423 YSVFSWLVDGFCKKNNADAVLAIPDELMKRGLPPDKAVYRSLIRRLCRKGLVDQAQRVFD 482
Query: 293 K 293
+
Sbjct: 483 Q 483
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 63/152 (41%), Gaps = 1/152 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + KA + A++ F +M F+ L+ D V + +L K
Sbjct: 394 LIHGFCKARELDGAKEAFFQMVDAGFSPNYSVFSWLVDGFCKKNNADAVLAIPDEL-MKR 452
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ PD Y ++I+ KG +D A + +M+ KG+ D + + TL + + G A
Sbjct: 453 GLPPDKAVYRSLIRRLCRKGLVDQAQRVFDQMQSKGLVGDSLVYATLAYTYLTKGNPTAA 512
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQT 249
+ M + + YN A EK+T
Sbjct: 513 LNTLDGMTKNQLYITPQIYNCLCTSYADEKET 544
>gi|255660852|gb|ACU25595.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 418
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 139/301 (46%), Gaps = 13/301 (4%)
Query: 67 LANAKRFRWIEEILEHQKQYKDISKEGFTARL------IALYGKAAMFENARKVFDEMPG 120
L + FR+ + + + YK++ + G+ A L + + K A+ VFD +
Sbjct: 108 LEHLMEFRYFKLVWDF---YKEVLECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITK 164
Query: 121 RNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLD 180
+V+SFN L+ + DE L K H G +PD+ +Y+ +I +G LD
Sbjct: 165 WGLRPSVVSFNTLINGYIKLGDLDEGFRL-KSAMHASGAQPDVYTYSILINGLCKEGKLD 223
Query: 181 SANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARL 240
AN L EM G+ + +TF TL+ G N + A +I++ M++ + P++ +YN +
Sbjct: 224 EANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLI 283
Query: 241 DGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCG 297
GL + + K+ +L+ EM + PD ++ LI G EG+LE A NK
Sbjct: 284 YGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESIR 343
Query: 298 MNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
++ + L+ +C +G A + + S D ++++ K+ + A +L
Sbjct: 344 LDDVAYTALISCLCREGRASDAEKMLREMLSVGLKPDNGTYTMIINEFCKKRDSKTASKL 403
Query: 358 V 358
+
Sbjct: 404 L 404
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 1/173 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K + A +++ +M + ++++N L+ + +V L ++
Sbjct: 247 LIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMN- 305
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD +SY T+I +G L+ A L +M ++ IRLD + + L+ GR +DA
Sbjct: 306 GLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRASDA 365
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
EK+ M+++ ++P+ +Y ++ ++ +K A +L+ EM+ P V T
Sbjct: 366 EKMLREMLSVGLKPDNGTYTMIINEFCKKRDSKTASKLLREMQRDGPLPGVVT 418
>gi|255549482|ref|XP_002515794.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545122|gb|EEF46633.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 924
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 132/265 (49%), Gaps = 4/265 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI LY K A +V M + + +++ L+ + K + +F+D+ K
Sbjct: 487 LINLYAKVGKISKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDVV-KD 545
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD+V YN II+AF G++D A ++ EM+K+ R TF ++ GF G A
Sbjct: 546 GLKPDVVLYNNIIRAFCGMGTMDRAICMVKEMQKERHRPTSRTFMPIIHGFARAGEMKRA 605
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+++ M P V ++NA + GL ++Q +KA+E++ EM ++P+ T+ ++ G
Sbjct: 606 LDVFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMALAGVSPNEHTYTTIMHG 665
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
+ G+ +A ++ K G ++ ++ L+ C+ G + A + K ++ +
Sbjct: 666 YAALGDTGKAFEYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRN 725
Query: 335 QAPLQLVVDRLAKELRVEEAKELVE 359
+++D A+ V EA +L++
Sbjct: 726 TFVYNILIDGWARRGDVWEAADLMQ 750
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 99/216 (45%), Gaps = 2/216 (0%)
Query: 74 RWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNAL 133
R I + E QK+ + F +I + +A + A VFD M C TV +FNAL
Sbjct: 569 RAICMVKEMQKERHRPTSRTFMP-IIHGFARAGEMKRALDVFDMMRRSGCIPTVHTFNAL 627
Query: 134 LGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKG 193
+ V ++ ++ + ++ G+ P+ +Y TI+ + G A ++ +G
Sbjct: 628 ILGLVEKRQMEKAIEILDEMA-LAGVSPNEHTYTTIMHGYAALGDTGKAFEYFTKLRDEG 686
Query: 194 IRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKAL 253
++LD+ T+ LL +GR A + + M N+ N YN +DG A +A
Sbjct: 687 LQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFVYNILIDGWARRGDVWEAA 746
Query: 254 ELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
+L+ +M+ + PD+ T+ + I G++ A +
Sbjct: 747 DLMQQMKQGGVKPDIHTYTSFINACCKAGDMLRASK 782
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 119/266 (44%), Gaps = 12/266 (4%)
Query: 27 VIRGIYKENNLKRLVDKF---KKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQ 83
+I G + +KR +D F ++S + T + G V++ K ++E+
Sbjct: 592 IIHGFARAGEMKRALDVFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEM---- 647
Query: 84 KQYKDISKEGFTARLIALYGKAAMFENAR--KVFDEMPGRNCEQTVLSFNALLGACVNSK 141
+S T I ++G AA+ + + + F ++ + V ++ ALL AC S
Sbjct: 648 -ALAGVSPNEHTYTTI-MHGYAALGDTGKAFEYFTKLRDEGLQLDVYTYEALLKACCKSG 705
Query: 142 KFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITF 201
+ + K++ + I + YN +I + +G + A L+ +M++ G++ D+ T+
Sbjct: 706 RMQSALAVTKEMSAQ-NIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQGGVKPDIHTY 764
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS 261
+ + G A K+ E M V+PNV++Y + G A +KAL EM+
Sbjct: 765 TSFINACCKAGDMLRASKMMEEMETSGVKPNVKTYTTLIHGWARASLPEKALRCFQEMKL 824
Query: 262 KEINPDVFTFYALIKGFVNEGNLEEA 287
+ PD ++ L+ ++ + EA
Sbjct: 825 AGLKPDKAVYHCLMTALLSRATVTEA 850
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 101/242 (41%), Gaps = 16/242 (6%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI Y E A +M E ++++++ ++G D D FK+ +
Sbjct: 347 LIHAYAVGRDMEEALSCARKMKEEGVEMSLVTYSIIVGGFAKIGNADAADRWFKEAKDRH 406
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
+ + Y +I A+ ++D A L+ EME +GI + ++T++ G+ G
Sbjct: 407 S-HMNAIIYGNMIYAYCQTCNMDQAEALVREMEGEGIDAPIDIYHTMMDGYTMVGNEEKC 465
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++E + P+V SY ++ A + KALE+ M S I ++ T+ LI G
Sbjct: 466 LTVFERLKECGFAPSVVSYGCLINLYAKVGKISKALEVSKMMESAGIKHNMKTYSMLING 525
Query: 278 FVNEGNLEEAKRWYN---------KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFS 328
F+ + K W N K G + ++ ++ C G +D A + K
Sbjct: 526 FL------KLKDWANAFAIFEDVVKDGLKPDVVLYNNIIRAFCGMGTMDRAICMVKEMQK 579
Query: 329 ER 330
ER
Sbjct: 580 ER 581
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/125 (21%), Positives = 60/125 (48%), Gaps = 4/125 (3%)
Query: 204 LLLGFYSN-GRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
L++ +Y+ G A + +E+M + P Y + + A+ + ++AL +M+ +
Sbjct: 311 LMVSYYARRGDMHRARQTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSCARKMKEE 370
Query: 263 EINPDVFTFYALIKGFVNEGNLEEAKRWYNKS---GCGMNKAIFKLLVPFVCEKGDLDFA 319
+ + T+ ++ GF GN + A RW+ ++ MN I+ ++ C+ ++D A
Sbjct: 371 GVEMSLVTYSIIVGGFAKIGNADAADRWFKEAKDRHSHMNAIIYGNMIYAYCQTCNMDQA 430
Query: 320 FNLCK 324
L +
Sbjct: 431 EALVR 435
>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
Length = 600
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 158/348 (45%), Gaps = 18/348 (5%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
+VI G+ K ++ + F++ S T T YT + L A+ ++ E Q
Sbjct: 148 AVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRT-TYTVVIDGLCKAQMLPDACKVFEQMVQ 206
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
+ LI + KA+ + ARK+ D M + E T +++ +++ +E
Sbjct: 207 KGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINE 266
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
+ + + G EP L + +++ ++ KG + A +L EM +G D+I + +L+
Sbjct: 267 AKEVIAQMRER-GCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLI 325
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEIN 265
+S GR +A ++++M+ P+ +Y + + + A E++ M +
Sbjct: 326 DLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVG 385
Query: 266 PDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
PD F + +L+ G+V +++A Y++ SG N F +L+ + + G D AF+L
Sbjct: 386 PDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSL 445
Query: 323 CKRTFSERCLVDQAPLQLV-----VDRLAKELRVEEA----KELVELG 361
F E ++ P LV +D L K RV EA +E+++ G
Sbjct: 446 ----FKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRG 489
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 119/242 (49%), Gaps = 8/242 (3%)
Query: 122 NCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDS 181
CE T++S+N ++ + K DE F + G EPD++++ T+I F G
Sbjct: 2 GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDN-GCEPDVIAFTTLIHGFCKAGQPQV 60
Query: 182 ANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLD 241
+ LL + K+ R D+ + +++ G+ G D + + V +V SY +
Sbjct: 61 GHKLLNQALKR-FRPDVFLYTSVIHGYCKAG---DLDTGYFRAVTPKASLDVISYTTVIK 116
Query: 242 GLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGM 298
GLA K+ +A EL E+++ +P+V + A+I G + G +E+ + + + S C
Sbjct: 117 GLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVP 176
Query: 299 NKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
+ + +++ +C+ L A + ++ + C+ D ++D +K +++EA++L+
Sbjct: 177 TRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLL 236
Query: 359 EL 360
++
Sbjct: 237 DV 238
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 91/195 (46%), Gaps = 3/195 (1%)
Query: 102 YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEP 161
Y K + A V+D M + ++FN L+ K D LFK++ K + P
Sbjct: 398 YVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPP 457
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
LVSY +I G + A EM +GI + T+ +L+ GR +A+K+
Sbjct: 458 TLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLV 517
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
E MV + V P+V++Y+A + GL A ++ EM + P+ T+ L +GF
Sbjct: 518 EDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAA 577
Query: 282 G---NLEEAKRWYNK 293
G +LE K+ +++
Sbjct: 578 GRALDLEAVKQHFSQ 592
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 102/236 (43%), Gaps = 4/236 (1%)
Query: 127 VLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLL 186
V+S+ ++ +SK+ DE LF++L G P++V+Y +I + G ++
Sbjct: 108 VISYTTVIKGLADSKRIDEACELFEEL-KTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNF 166
Query: 187 YEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIE 246
EM T+ ++ G DA K++E MV P+ +Y +DG +
Sbjct: 167 EEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKA 226
Query: 247 KQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR---WYNKSGCGMNKAIF 303
+ +A +L+ M +K P T+ +++ GF + EAK + GC IF
Sbjct: 227 SKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIF 286
Query: 304 KLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
L+ + KG + A+ + + C D ++D L RV EA+ + +
Sbjct: 287 TSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFD 342
>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
Length = 813
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 133/298 (44%), Gaps = 39/298 (13%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI Y K M + A +F+EM + E V++++ ++ A K D+ F + +
Sbjct: 397 LIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQ- 455
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ P + +Y+ +I+ F G L A L+ +M KG+R D+ FN ++ GR DA
Sbjct: 456 GVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDA 515
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ I++ +++ + PNV YN +DG + + + AL + M S I P+V + L+ G
Sbjct: 516 QNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNG 575
Query: 278 FVNEGNLEE---------------AKRWYN-----------------------KSGCGMN 299
+ G ++E + YN +SG M+
Sbjct: 576 YCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMD 635
Query: 300 KAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
+ + +++ + + D A L K + +D L +++ + + RVEEAK+L
Sbjct: 636 RYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDL 693
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/388 (21%), Positives = 159/388 (40%), Gaps = 44/388 (11%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEIL----- 80
+VI G +KE ++ + D F + G + Y V L A+ E IL
Sbjct: 221 TVIDGFFKEGDVNKACDLFNEMVQRG-ISPDLSTYNCVVNALCKARAMDKAEAILRQMVD 279
Query: 81 ------------------------EHQKQYKDISKEGFTARLIALYG------KAAMFEN 110
E + K ++ +G ++ L K ++
Sbjct: 280 KGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKD 339
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
AR VFD M + + + S+ +L ++ LF +L GI PD +N +I
Sbjct: 340 ARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELF-NLMLSDGIAPDSHIFNVLI 398
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
KA+ G LD A + EM ++G+ D++T++T++ G+ DA + + M++ V
Sbjct: 399 KAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVA 458
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
P++ +Y+ + G KA +LV +M +K + PD+ F +I G + +A+
Sbjct: 459 PSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNI 518
Query: 291 YNKS---GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAK 347
++ + G N ++ L+ C G ++ A + S + +V+ K
Sbjct: 519 FDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCK 578
Query: 348 ELRVEEA----KELVELGKTNSYCRYNL 371
R++E +E++ G S YN+
Sbjct: 579 VGRIDEGLSLFREILHKGIKPSTTLYNI 606
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/378 (21%), Positives = 166/378 (43%), Gaps = 23/378 (6%)
Query: 12 FSTTATATGPKFIGSVIR--GIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRL-- 67
F+ + A GP+ + + GI + + K + +T GI T + L
Sbjct: 92 FNRVSRAHGPRVLSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLR 151
Query: 68 --ANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEM------P 119
AKR +IL H+ + + F+ ++ K+ + DE+
Sbjct: 152 GLCEAKRTAEALDILLHRMPHLGCVPDVFSYCIVL---KSLCSDRKSGQADELLRMMAEG 208
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL 179
G C +++N ++ ++ LF ++ + GI PDL +YN ++ A ++
Sbjct: 209 GAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQR-GISPDLSTYNCVVNALCKARAM 267
Query: 180 DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNAR 239
D A +L +M KG+ D T+N+L+ G+ S G++ +A ++ + M + + P+V + N+
Sbjct: 268 DKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSL 327
Query: 240 LDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGC 296
+ L + K A ++ M K D+F++ ++ G+ +G L + +N G
Sbjct: 328 MASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGI 387
Query: 297 GMNKAIFKLLVPFVCEKGDLDFA---FNLCKRTFSERCLVDQAPLQLVVDRLAK-ELRVE 352
+ IF +L+ + G LD A FN + E +V + + + R+ K + VE
Sbjct: 388 APDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVE 447
Query: 353 EAKELVELGKTNSYCRYN 370
+ ++++ G S Y+
Sbjct: 448 KFNQMIDQGVAPSISTYH 465
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 117/255 (45%), Gaps = 9/255 (3%)
Query: 110 NARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTI 169
+A+ +FD V+ +N L+ K + +F D+ GI+P++V Y T+
Sbjct: 514 DAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVF-DVMVSAGIQPNVVVYGTL 572
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
+ + G +D +L E+ KGI+ +N +L G + GR A+ + M +
Sbjct: 573 VNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGI 632
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
+ +Y+ L GL + +A+ L E+ + + D+ T +I G +EEAK
Sbjct: 633 AMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKD 692
Query: 290 WY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLA 346
+ ++SG + + +++ + ++G ++ A ++ + C + P +++ +
Sbjct: 693 LFASISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFSSMENAGC---EQPNSQLLNHVV 749
Query: 347 KELRVEEAKELVELG 361
+EL E +E+V G
Sbjct: 750 RELL--EKREIVRAG 762
>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 512
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 124/239 (51%), Gaps = 5/239 (2%)
Query: 80 LEHQKQYKDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACV 138
L H+ ++I+ +T + L+ + K + A+ VF M ++ + ++++N+L+
Sbjct: 266 LLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYC 325
Query: 139 NSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL 198
+ ++ + +F + ++G+ PD+ SY+ +I F +D A L EM K I D+
Sbjct: 326 LVNEVNKAESIFNTMA-QIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDV 384
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
+T+N+L+ G +GR + A K+ M + PN+ +YN+ LD L KA+EL+ +
Sbjct: 385 VTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTK 444
Query: 259 MRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKG 314
++ I P V T+ LI G G L++A++ + +G ++ + ++ C+KG
Sbjct: 445 LKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKKG 503
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 138/311 (44%), Gaps = 18/311 (5%)
Query: 71 KRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSF 130
K + +++L Q +S L + A E R++ G+ V+ +
Sbjct: 157 KALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRI----DGKLVRLDVVMY 212
Query: 131 NALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEME 190
N ++ K ++ + ++ K I P +V+YNT+I G L A LL++M
Sbjct: 213 NTIIDGVCKDKLVNDAFDFYSEMVAK-RICPTVVTYNTLICGLCIMGQLKDAIGLLHKMI 271
Query: 191 KKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTK 250
+ I + TF+ L+ F G+ +A+ ++ M+ +V+PN+ +YN+ ++G + +
Sbjct: 272 LENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVN 331
Query: 251 KALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKAIFKLLVPF- 309
KA + M + PDV ++ +I GF ++EA + + + C K IF +V +
Sbjct: 332 KAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHC---KQIFPDVVTYN 388
Query: 310 -----VCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKTN 364
+C+ G + +A L + ++D L K V++A EL+ K +
Sbjct: 389 SLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDH 448
Query: 365 ----SYCRYNL 371
S C YN+
Sbjct: 449 NIQPSVCTYNI 459
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 4/214 (1%)
Query: 80 LEHQKQYKDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GAC 137
L Q ++ I+ T + LI + + + VF + + E ++ L+ G C
Sbjct: 91 LHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLC 150
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLD 197
+ + F D LG + + VSY T+I G +A +L ++ K +RLD
Sbjct: 151 LKGDIHKALH--FHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLD 208
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
++ +NT++ G + DA + MV + P V +YN + GL I Q K A+ L+
Sbjct: 209 VVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLH 268
Query: 258 EMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY 291
+M + INP V+TF L+ F EG ++EAK +
Sbjct: 269 KMILENINPTVYTFSILVDAFCKEGKVKEAKNVF 302
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 91/247 (36%), Gaps = 40/247 (16%)
Query: 150 FKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL----------- 198
F L H+ P ++ + I+ + V +L +ME GI +L
Sbjct: 56 FNHLLHQKNPTPSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFS 115
Query: 199 ------------------------ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVR 234
IT TL+ G G A + ++ + + N
Sbjct: 116 QLGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQV 175
Query: 235 SYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN-- 292
SY ++GL QTK ALE++ + K + DV + +I G + + +A +Y+
Sbjct: 176 SYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEM 235
Query: 293 --KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELR 350
K C + L+ +C G L A L + E ++VD KE +
Sbjct: 236 VAKRICP-TVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGK 294
Query: 351 VEEAKEL 357
V+EAK +
Sbjct: 295 VKEAKNV 301
>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
Length = 399
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 120/270 (44%), Gaps = 14/270 (5%)
Query: 98 LIALYGKAAMFENARKVFDEM---PGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLP 154
L+ + A + A + EM PG T +N + A S K E + K++
Sbjct: 24 LVRAHCLAGELQAAMDLLREMEQQPGM--APTPSMYNFFVHALCKSGKVPEAMEVVKNMK 81
Query: 155 HKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRF 214
+PD+V++NT+I G LD A +L EME+ G +L+T+NTL+ G S GR
Sbjct: 82 DG-ACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRS 140
Query: 215 ADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE-INPDVFTFYA 273
+A + M M P+ ++YNA + G + +A + EM+ + +PD FT+
Sbjct: 141 GEAVLV---MQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSI 197
Query: 274 LIKGFVNEGNLEEA----KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSE 329
LI G NL +A + + C + F LV C+ DLD A L
Sbjct: 198 LINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEH 257
Query: 330 RCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
C D ++D L + V++ L+E
Sbjct: 258 GCAPDVVTYSTIIDGLCRCGDVDKGFALLE 287
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 131/313 (41%), Gaps = 16/313 (5%)
Query: 18 ATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIE 77
A P + + K + ++ K D G + + + + L A R +
Sbjct: 51 APTPSMYNFFVHALCKSGKVPEAMEVVKNMKD-GACKPDVVTFNTLIAGLCKAGRLDEAQ 109
Query: 78 EILEHQKQYKDISKEGFTARLIA----LYGKAAMFENARKVFDEMPGRNCEQTVLSFNAL 133
++L+ ++ + GF A L+ + G ++ + V M G ++NA+
Sbjct: 110 QVLD------EMERSGFAANLVTYNTLINGLSSAGRSGEAVL-VMQGMTTTPDTQTYNAI 162
Query: 134 LGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEM-EKK 192
+ S + D G +++ + G PD +Y+ +I +L A+ LL EM +K
Sbjct: 163 IHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRK 222
Query: 193 GIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKA 252
++ FNTL+ G+ A ++ +M+ P+V +Y+ +DGL K
Sbjct: 223 DCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKG 282
Query: 253 LELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPF 309
L+ +M S+ PDV T+ L+ G G + EA R + GC N + L+
Sbjct: 283 FALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDG 342
Query: 310 VCEKGDLDFAFNL 322
+C+ LD A +L
Sbjct: 343 LCKIDKLDMANDL 355
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 122/266 (45%), Gaps = 9/266 (3%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LIA KA + A++V DEM ++++N L+ ++ + E + + +
Sbjct: 95 LIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQGMT--- 151
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKK-GIRLDLITFNTLLLGFYSNGRFAD 216
PD +YN II F G +D A L EM+++ G D T++ L+ G +
Sbjct: 152 -TTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRK 210
Query: 217 AEKIWETMVNM-NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
A+++ + M+ + +V ++N +DG + +A EL+ M PDV T+ +I
Sbjct: 211 ADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTII 270
Query: 276 KGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCL 332
G G++++ K GC + + +LV +C+ G + A L KR + C
Sbjct: 271 DGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCT 330
Query: 333 VDQAPLQLVVDRLAKELRVEEAKELV 358
+ LV D L K +++ A +L+
Sbjct: 331 PNAVTYSLVFDGLCKIDKLDMANDLL 356
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 100/222 (45%), Gaps = 3/222 (1%)
Query: 56 NTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFT-ARLIALYGKAAMFENARKV 114
+T Y + + LE KQ S + FT + LI K++ A ++
Sbjct: 155 DTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADEL 214
Query: 115 FDEMPGR-NCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAF 173
EM GR +C +V++FN L+ ++ D L + G PD+V+Y+TII
Sbjct: 215 LQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEH-GCAPDVVTYSTIIDGL 273
Query: 174 VDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNV 233
G +D LL +M +G + D++T+ L+ G G+ +A ++ + M+ PN
Sbjct: 274 CRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNA 333
Query: 234 RSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
+Y+ DGL + A +L+ +R K DV F L+
Sbjct: 334 VTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFETLL 375
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 79/218 (36%), Gaps = 39/218 (17%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I G K + R ++ +T Y+ + L + R +E+L+
Sbjct: 161 AIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIG 220
Query: 86 YKDI--SKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKF 143
KD S F L+ Y KA + AR++ M C V++++ ++
Sbjct: 221 RKDCCASVVAFNT-LVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDV 279
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGS------------------------- 178
D+ L + + + G +PD+V+Y ++ G
Sbjct: 280 DKGFALLEKMVSR-GCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSL 338
Query: 179 ----------LDSANTLLYEMEKKGIRLDLITFNTLLL 206
LD AN LL + KG D++ F TLLL
Sbjct: 339 VFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFETLLL 376
>gi|255660798|gb|ACU25568.1| pentatricopeptide repeat-containing protein [Verbena intermedia]
Length = 418
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 109/207 (52%), Gaps = 4/207 (1%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A+ VFD + +V+SFN L+ + +E L K+ G++PD+ +Y+ +I
Sbjct: 155 AQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRL-KNAMQASGVQPDVYTYSVLI 213
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
+ +D AN L EM KG+ + +TF TL+ G NGR A +I++ M++ ++
Sbjct: 214 NGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLS 273
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA--- 287
P++ +YN + GL + K+A +L+ EM K + PD T+ LI G EG+LE A
Sbjct: 274 PDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLETAFEY 333
Query: 288 KRWYNKSGCGMNKAIFKLLVPFVCEKG 314
++ K ++ + L+ +C++G
Sbjct: 334 RKRMIKENIRLDDVAYTALISGLCQEG 360
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 83/173 (47%), Gaps = 1/173 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K + A +++ +M ++ ++++N L+ + L ++ K
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMK- 305
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD ++Y T+I +G L++A M K+ IRLD + + L+ G GR DA
Sbjct: 306 GLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDA 365
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
EK+ M+++ ++P + +Y ++ + +L+ EM+ P V T
Sbjct: 366 EKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
Length = 1014
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 120/247 (48%), Gaps = 5/247 (2%)
Query: 127 VLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLL 186
V ++NAL+ +++FD+ D LFK++ + G+EP+ V+Y +I A +G ++ A L
Sbjct: 338 VFAYNALIDKLCKNERFDDADRLFKEMAGR-GLEPNEVTYAILIHALCKRGMIEDALCLF 396
Query: 187 YEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIE 246
+M KGI++ + +N+L+ G+ G A + MV + P SY+ + GL
Sbjct: 397 DKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRN 456
Query: 247 KQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIF 303
A+EL EM + I + +TF ALI GF + ++EA R ++K S N+ F
Sbjct: 457 GDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTF 516
Query: 304 KLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKT 363
+++ C G++ AF L + D + ++ L V +A E V
Sbjct: 517 NVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVA-DLE 575
Query: 364 NSYCRYN 370
NSY N
Sbjct: 576 NSYAVLN 582
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 115/248 (46%), Gaps = 14/248 (5%)
Query: 46 KSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFT------ARLI 99
K DLG N Y + +L +RF + + +K+++ G A LI
Sbjct: 328 KLGDLGMV-PNVFAYNALIDKLCKNERFD------DADRLFKEMAGRGLEPNEVTYAILI 380
Query: 100 ALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGI 159
K M E+A +FD+M + + TV +N+L+ D GL + K G+
Sbjct: 381 HALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMV-KEGL 439
Query: 160 EPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEK 219
P SY+ +I G L SA L EM ++GI + TF L+ GF + + +A +
Sbjct: 440 TPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAAR 499
Query: 220 IWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFV 279
+++ M++ NV PN ++N ++G + +KA +L +M + PD +T+ +LI G
Sbjct: 500 LFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLC 559
Query: 280 NEGNLEEA 287
+ +A
Sbjct: 560 LTSGVSKA 567
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 122/271 (45%), Gaps = 13/271 (4%)
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNS---KKFDEVDGL 149
FTA LI + K + A ++FD+M N ++FN ++ G C+ K F D +
Sbjct: 481 FTA-LINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQM 539
Query: 150 FKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFY 209
+ +G++PD +Y ++I + AN + ++E L+ + LL G +
Sbjct: 540 VE-----MGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLF 594
Query: 210 SNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVF 269
GRF + +W+ M V+ ++ S+ + + +K+ L EM+ + + PD
Sbjct: 595 REGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDI 654
Query: 270 TFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRT 326
+ +I E N+ +A +++ G N +L+ +C+ G L A LCK
Sbjct: 655 FYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEM 714
Query: 327 FSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
+ L ++ +D A E +E+AK+L
Sbjct: 715 LAGNVLPNKFTYNCFLDYFATEGDMEKAKDL 745
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 129/301 (42%), Gaps = 43/301 (14%)
Query: 99 IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKL 157
I Y ++ + AR + M + + + +N L+ G C N + + V+ K++ +
Sbjct: 205 IRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVE--VKNVMVNI 262
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSA-------------------NTLLYEMEKK------ 192
G+ D V+Y T++ F L+ A + ++ E+ KK
Sbjct: 263 GVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEA 322
Query: 193 ----------GIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDG 242
G+ ++ +N L+ N RF DA+++++ M + PN +Y +
Sbjct: 323 FSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHA 382
Query: 243 LAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMN 299
L + AL L +MR K I V+ + +LI G+ +G+L+ A+ + K G
Sbjct: 383 LCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPT 442
Query: 300 KAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV-DQAPLQLVVDRLAKELRVEEAKELV 358
A + L+ +C GDL A L R +ER + + +++ K+ +++EA L
Sbjct: 443 AASYSPLIAGLCRNGDLSSAMEL-HREMAERGIAWNNYTFTALINGFCKDKKMDEAARLF 501
Query: 359 E 359
+
Sbjct: 502 D 502
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 103/231 (44%), Gaps = 3/231 (1%)
Query: 129 SFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
S ALL +F E L+ ++ + G++ DLVS+ I+ A + + + + L E
Sbjct: 585 SLTALLYGLFREGRFTETYHLWDEMAVR-GVKLDLVSFTIIVYAALKQHDKEKSCVLFRE 643
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
M+++G++ D I + ++ A W+ MV PN ++ ++ L
Sbjct: 644 MKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGY 703
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKAI--FKLL 306
A L EM + + P+ FT+ + F EG++E+AK ++ G +I F +L
Sbjct: 704 LGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNIL 763
Query: 307 VPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
+ +C+ G + A +L ++ D ++ L K + +A EL
Sbjct: 764 IKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDINKAFEL 814
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 1/120 (0%)
Query: 126 TVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTL 185
+++SFN L+ + K E L + + G PD +SY+TII G ++ A L
Sbjct: 756 SIVSFNILIKGLCKAGKIQEAIDLMRKITES-GFSPDCISYSTIIHELCKMGDINKAFEL 814
Query: 186 LYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAI 245
EM KG++ D++ +N + +G A I+ M+ V+PN +Y A L G+++
Sbjct: 815 WNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISL 874
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 110/252 (43%), Gaps = 41/252 (16%)
Query: 148 GLFKDLPHKL---GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
L +DL K+ G+ D Y I+A+ + +LD A L+ ME +G++ + +N L
Sbjct: 180 ALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVL 239
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALE---------- 254
+ G N R +A ++ MVN+ V + +Y + G ++ + AL
Sbjct: 240 MYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGF 299
Query: 255 ---------LVGEMRSKEI----------------NPDVFTFYALIKGFVNEGNLEEAKR 289
++ E+R KE+ P+VF + ALI ++A R
Sbjct: 300 VPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADR 359
Query: 290 WYNK-SGCGM--NKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLA 346
+ + +G G+ N+ + +L+ +C++G ++ A L + + V P +++
Sbjct: 360 LFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYC 419
Query: 347 KELRVEEAKELV 358
K+ ++ A+ L+
Sbjct: 420 KQGSLDRARGLL 431
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 63/130 (48%), Gaps = 2/130 (1%)
Query: 151 KDLPHKL--GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
KDL + G +VS+N +IK G + A L+ ++ + G D I+++T++
Sbjct: 743 KDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHEL 802
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDV 268
G A ++W M+ ++P+V +YN + + ++ KAL + M + P+
Sbjct: 803 CKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNW 862
Query: 269 FTFYALIKGF 278
T+ AL+ G
Sbjct: 863 DTYRALLSGI 872
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 69/164 (42%), Gaps = 4/164 (2%)
Query: 159 IEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAE 218
+ P+ +YN + F +G ++ A L M +G +++FN L+ G G+ +A
Sbjct: 719 VLPNKFTYNCFLDYFATEGDMEKAKDLHSAM-LQGHLASIVSFNILIKGLCKAGKIQEAI 777
Query: 219 KIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGF 278
+ + P+ SY+ + L KA EL EM K + PDV + I+
Sbjct: 778 DLMRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWC 837
Query: 279 VNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFA 319
G ++A Y +SG N ++ L+ + DF+
Sbjct: 838 NVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLMLHYDFS 881
Score = 37.7 bits (86), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 72/185 (38%), Gaps = 7/185 (3%)
Query: 193 GIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKA 252
GI ++ T + +L +FA A +++ M+ V + Y A + + A
Sbjct: 158 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 217
Query: 253 LELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPF 309
LV M S+ + + L+ G ++EA N G ++ ++ LV
Sbjct: 218 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYG 277
Query: 310 VCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV----ELGKTNS 365
C +L+ A + + +A ++D L K+ VEEA L +LG +
Sbjct: 278 FCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPN 337
Query: 366 YCRYN 370
YN
Sbjct: 338 VFAYN 342
>gi|255660814|gb|ACU25576.1| pentatricopeptide repeat-containing protein [Junellia spathulata]
Length = 418
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 142/313 (45%), Gaps = 4/313 (1%)
Query: 5 SRLLSCSFSTTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTV 64
S + + T T ++ S + Y E+ R + + + +FR +
Sbjct: 49 SAVFAAILETRGTQRSDIYVFSGLITAYLESGFLRDAIECXRLTKEHKFRVPFDTCRKVL 108
Query: 65 QRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCE 124
+ L K F+ + E + + F L+ + K A+ VFD +
Sbjct: 109 EHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLR 168
Query: 125 QTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANT 184
+V+SFN L+ + +E L K+ G++PD+ +Y+ +I + +D AN
Sbjct: 169 PSVVSFNTLMNGYIKLGDLNEGFRL-KNAMQASGVQPDVYTYSVLINGLCKESKMDDANE 227
Query: 185 LLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLA 244
L EM G+ + +TF TL+ G NGR A +I++ M++ ++ P++ +YN + GL
Sbjct: 228 LFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLC 287
Query: 245 IEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA---KRWYNKSGCGMNKA 301
+ K+A +L+ EM K + PD T+ LI G EG+LE A ++ K ++
Sbjct: 288 KKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKIMIKENIRLDDV 347
Query: 302 IFKLLVPFVCEKG 314
+ L+ +C++G
Sbjct: 348 AYTALISGLCQEG 360
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 82/173 (47%), Gaps = 1/173 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K + A +++ +M ++ ++++N L+ + L ++ K
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMK- 305
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD ++Y T+I +G L++A M K+ IRLD + + L+ G GR DA
Sbjct: 306 GLKPDKITYTTLIDGSCKEGDLETAFEYRKIMIKENIRLDDVAYTALISGLCQEGRSVDA 365
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
EK+ M+++ ++ + +Y ++ + +L+ EM+ P V T
Sbjct: 366 EKMLREMLSVGLKLEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVT 418
>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
Length = 741
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 130/294 (44%), Gaps = 37/294 (12%)
Query: 102 YGKAAMFENARKVFDEMPGRNCEQTVLSFNALL----GACVNSKKFDEVDGLFKD----- 152
Y + +F +A ++F MP R C +T ++ ALL GA + + G++ D
Sbjct: 119 YCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPD 178
Query: 153 ------LPHKL-------------------GIEPDLVSYNTIIKAFVDKGSLDSANTLLY 187
+ H L G P++ YN +I + G L+ A +
Sbjct: 179 SHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFK 238
Query: 188 EMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEK 247
M+ KG ++ T+ L+ GF +G+ A ++ M+ + PNV +Y + G E
Sbjct: 239 GMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEG 298
Query: 248 QTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFK 304
+ A L+ M + + P+ +T LI G +EEA+++ + G +N+ I+
Sbjct: 299 HLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYT 358
Query: 305 LLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
++ +C+ G D A NL ++ +E + D ++D L +E ++ EA L+
Sbjct: 359 SMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLL 412
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 95/231 (41%), Gaps = 8/231 (3%)
Query: 130 FNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEM 189
N LL A +++ L +P + +L +Y T+I A+ G L +A L +
Sbjct: 46 LNTLLMALARHGMLSDMESLAARMPVR-----NLHTYTTLINAYCHAGDLPAAKRHLSSL 100
Query: 190 EKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQT 249
+ G+ D + + +LG+ G FA A +++ M +Y A L GL
Sbjct: 101 LRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCGAGMV 160
Query: 250 KKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS---GCGMNKAIFKLL 306
++A+ + M PD + ++ G G EA + G N A++ L
Sbjct: 161 REAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNAL 220
Query: 307 VPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
+ C GDL+ A ++ K S+ CL + ++ K +VE A L
Sbjct: 221 IDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVL 271
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 109/261 (41%), Gaps = 31/261 (11%)
Query: 53 FRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFT------ARLIALYGKAA 106
+ N IYT + L + +F +++ I EGF + LI +
Sbjct: 350 IKVNQVIYTSMIDALCKSGKFDGAHNLMQ------KIITEGFVPDAHMYSSLIDGLCREN 403
Query: 107 MFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSY 166
A + ++M + + F L+ + + D + D G++PD+V+Y
Sbjct: 404 KLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDS-PKMISDRMAAAGVKPDVVTY 462
Query: 167 NTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVN 226
I+++ G ++ A +++ +M G+R +L T+NTL+ G+ + G + A + M++
Sbjct: 463 TVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMID 522
Query: 227 MNVRPNVRSYNARLDGLAIEKQTKKAL-----------------ELVGEMRSKEINPDVF 269
+PN SY L GL ++K + L EL+ E+ + + +
Sbjct: 523 NGCKPNDESYTVLL-GLLLKKNSYHDLVADSISLWKIVDMKVLEELLEEVIKLQCSSASY 581
Query: 270 TFYALIKGFVNEGNLEEAKRW 290
+ I+ LEEAK +
Sbjct: 582 VYDCFIRCLSKVDRLEEAKSF 602
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/299 (20%), Positives = 111/299 (37%), Gaps = 43/299 (14%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+ + M + + MP RN + ++ L+ A ++ L +
Sbjct: 49 LLMALARHGMLSDMESLAARMPVRN----LHTYTTLINAYCHAGDLPAAKRHLSSL-LRA 103
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ PD +Y + + + G A L M ++G T+ LL G G +A
Sbjct: 104 GLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCGAGMVREA 163
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ M P+ Y+ + GL + +A+ L+ + K P+V + ALI G
Sbjct: 164 MAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALIDG 223
Query: 278 FVNEGNLEEA---------------KRWYNKSGCGM-----------------------N 299
+ + G+LE A R Y + CG N
Sbjct: 224 YCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPN 283
Query: 300 KAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
+ L+ C +G L+ AF L + ++ +++D L K R+EEA++ +
Sbjct: 284 VVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFL 342
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/302 (18%), Positives = 117/302 (38%), Gaps = 39/302 (12%)
Query: 56 NTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVF 115
++ +Y+ V L A R +L + LI Y E A +F
Sbjct: 178 DSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIF 237
Query: 116 DEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVD 175
M + C V ++ L+ S K + L+ + G+ P++V+Y T+I+
Sbjct: 238 KGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEA-GLAPNVVTYTTLIQGQCS 296
Query: 176 KGSLDSANTLLYEME-----------------------------------KKGIRLDLIT 200
+G L+ A LL+ ME +KGI+++ +
Sbjct: 297 EGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVI 356
Query: 201 FNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMR 260
+ +++ +G+F A + + ++ P+ Y++ +DGL E + +A+ L+ +M
Sbjct: 357 YTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMI 416
Query: 261 SKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLD 317
+ + F LI + E + K ++ +G + + + + C+ G ++
Sbjct: 417 ESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRME 476
Query: 318 FA 319
A
Sbjct: 477 DA 478
Score = 44.7 bits (104), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 58/144 (40%), Gaps = 3/144 (2%)
Query: 166 YNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMV 225
Y+ I+ L+ A + L M+ + + ++ Y +A + ++MV
Sbjct: 583 YDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIECCYRMKLLKEALRFLDSMV 642
Query: 226 NMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLE 285
N P + SY + L E A + G++ SKE N D + LI G + +GN
Sbjct: 643 KRNYLPRLESYRFIICALCEEGSFHTAKSIFGDILSKEYNRDEIAWKILIDGLLQKGNTA 702
Query: 286 EAKR---WYNKSGCGMNKAIFKLL 306
+ R + + C AI+ L
Sbjct: 703 DCSRLLSFMEEQNCRPGSAIYSRL 726
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 65/170 (38%), Gaps = 2/170 (1%)
Query: 73 FRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNA 132
+ +EE+LE + + S I K E A+ M N + +
Sbjct: 561 MKVLEELLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTC 620
Query: 133 LLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKK 192
++ C K E F D K P L SY II A ++GS +A ++ ++ K
Sbjct: 621 MIECCYRMKLLKEALR-FLDSMVKRNYLPRLESYRFIICALCEEGSFHTAKSIFGDILSK 679
Query: 193 GIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDG 242
D I + L+ G G AD ++ M N RP Y+ RL G
Sbjct: 680 EYNRDEIAWKILIDGLLQKGNTADCSRLLSFMEEQNCRPGSAIYS-RLTG 728
>gi|224097576|ref|XP_002310993.1| predicted protein [Populus trichocarpa]
gi|222850813|gb|EEE88360.1| predicted protein [Populus trichocarpa]
Length = 877
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 133/265 (50%), Gaps = 4/265 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI +Y K A +V M + + +++ L+ + K + +F+D+ K
Sbjct: 454 LINMYTKMGKVSKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWTNAFTVFEDVI-KD 512
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD+V YN IIKAF G++D A ++ EM+KK R TF ++ GF G A
Sbjct: 513 GLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKKRHRPTSRTFMPIIHGFARAGEMRRA 572
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+I++ M P V ++NA + GL ++Q +KA+E++ EM ++PD T+ ++ G
Sbjct: 573 LEIFDMMRRSGCIPTVHTFNALVLGLVEKRQMEKAVEILDEMALAGVSPDEHTYTTIMNG 632
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
+ G+ +A ++ K G ++ ++ L+ C+ G + A + + ++ +
Sbjct: 633 YAALGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTREMSAQNIPRN 692
Query: 335 QAPLQLVVDRLAKELRVEEAKELVE 359
+++D A+ V EA +L++
Sbjct: 693 TFVYNILIDGWARRGDVWEAADLMQ 717
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 98/216 (45%), Gaps = 2/216 (0%)
Query: 74 RWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNAL 133
R I + E QK+ + F +I + +A A ++FD M C TV +FNAL
Sbjct: 536 RAIHMVKEMQKKRHRPTSRTFMP-IIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNAL 594
Query: 134 LGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKG 193
+ V ++ ++ + ++ G+ PD +Y TI+ + G A ++ +G
Sbjct: 595 VLGLVEKRQMEKAVEILDEMALA-GVSPDEHTYTTIMNGYAALGDTGKAFEYFTKLRNEG 653
Query: 194 IRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKAL 253
+ LD+ T+ LL +GR A + M N+ N YN +DG A +A
Sbjct: 654 LELDVFTYEALLKACCKSGRMQSALAVTREMSAQNIPRNTFVYNILIDGWARRGDVWEAA 713
Query: 254 ELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
+L+ +M+ + + PD+ T+ + I G++ A +
Sbjct: 714 DLMQQMKQEGVQPDIHTYTSFINACCKAGDMLRATK 749
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 119/266 (44%), Gaps = 12/266 (4%)
Query: 27 VIRGIYKENNLKR---LVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQ 83
+I G + ++R + D ++S + T + G V++ K ++E+
Sbjct: 559 IIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRQMEKAVEILDEM---- 614
Query: 84 KQYKDISKEGFTARLIALYGKAAMFENAR--KVFDEMPGRNCEQTVLSFNALLGACVNSK 141
+S + T I + G AA+ + + + F ++ E V ++ ALL AC S
Sbjct: 615 -ALAGVSPDEHTYTTI-MNGYAALGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSG 672
Query: 142 KFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITF 201
+ + +++ + I + YN +I + +G + A L+ +M+++G++ D+ T+
Sbjct: 673 RMQSALAVTREMSAQ-NIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDIHTY 731
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS 261
+ + G A K + M + V+PNV++Y + G A +KAL EM+
Sbjct: 732 TSFINACCKAGDMLRATKTIQEMEALGVKPNVKTYTTLIHGWACASLPEKALRCFEEMKL 791
Query: 262 KEINPDVFTFYALIKGFVNEGNLEEA 287
+ PD ++ L+ ++ + EA
Sbjct: 792 AGLKPDKAVYHCLMTSLLSRATVAEA 817
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 139/325 (42%), Gaps = 25/325 (7%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I+ N+ R + K+ R R + + + A A R EI + ++
Sbjct: 523 NIIKAFCGMGNMDRAIHMVKEMQK-KRHRPTSRTFMPIIHGFARAGEMRRALEIFDMMRR 581
Query: 86 YKDI-SKEGFTARLIALYGKAAMFENARKVFDEM------PGRNCEQTVLSFNALLGACV 138
I + F A ++ L K M E A ++ DEM P + T+++ A LG
Sbjct: 582 SGCIPTVHTFNALVLGLVEKRQM-EKAVEILDEMALAGVSPDEHTYTTIMNGYAALGD-- 638
Query: 139 NSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL 198
K F+ L + G+E D+ +Y ++KA G + SA + EM + I +
Sbjct: 639 TGKAFEYFTKLRNE-----GLELDVFTYEALLKACCKSGRMQSALAVTREMSAQNIPRNT 693
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
+N L+ G+ G +A + + M V+P++ +Y + ++ +A + + E
Sbjct: 694 FVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDIHTYTSFINACCKAGDMLRATKTIQE 753
Query: 259 MRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGD 315
M + + P+V T+ LI G+ E+A R + + +G +KA++ L+ + +
Sbjct: 754 MEALGVKPNVKTYTTLIHGWACASLPEKALRCFEEMKLAGLKPDKAVYHCLMTSLLSRAT 813
Query: 316 LDFAF------NLCKRTFSERCLVD 334
+ A+ ++C+ VD
Sbjct: 814 VAEAYIYSGILSICREMIESELTVD 838
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 83/177 (46%), Gaps = 4/177 (2%)
Query: 149 LFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
+FK L + G P ++SY +I + G + A + ME GI+ ++ T++ L+ GF
Sbjct: 435 VFKRL-KECGFAPSVISYGCLINMYTKMGKVSKALEVSKMMESAGIKHNMKTYSMLINGF 493
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDV 268
+ +A ++E ++ ++P+V YN + +A+ +V EM+ K P
Sbjct: 494 LKLKDWTNAFTVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKKRHRPTS 553
Query: 269 FTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
TF +I GF G + A ++ +SGC F LV + EK ++ A +
Sbjct: 554 RTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRQMEKAVEI 610
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/306 (17%), Positives = 126/306 (41%), Gaps = 45/306 (14%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
++ Y + AR+ F+ M R + + +L+ A + +E + + +
Sbjct: 308 MVGYYARRGDMHRARQTFESMRVRGIYPSSHVYTSLIHAYAVGRDMEEALSCVRKMKEE- 366
Query: 158 GIEPDLVSYNTIIKAFVDKGS------LDSANTLLYEMEKKGIRLDLITFNTLLLGF--- 208
G+E LV+Y+ ++ F G+ +D A +L+ EME++GI + ++T++ G+
Sbjct: 367 GVEMSLVTYSIVVGGFAKIGNADQSCNMDRAESLVREMEEEGIDAPIDIYHTMMNGYTMI 426
Query: 209 -------------------------------YSN-GRFADAEKIWETMVNMNVRPNVRSY 236
Y+ G+ + A ++ + M + ++ N+++Y
Sbjct: 427 GNEEKCLIVFKRLKECGFAPSVISYGCLINMYTKMGKVSKALEVSKMMESAGIKHNMKTY 486
Query: 237 NARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGC 296
+ ++G K A + ++ + PDV + +IK F GN++ A +
Sbjct: 487 SMLINGFLKLKDWTNAFTVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQK 546
Query: 297 GMNKAIFKLLVPFV---CEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEE 353
++ + +P + G++ A + C+ +V L ++ ++E+
Sbjct: 547 KRHRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRQMEK 606
Query: 354 AKELVE 359
A E+++
Sbjct: 607 AVEILD 612
>gi|255660810|gb|ACU25574.1| pentatricopeptide repeat-containing protein [Glandularia dissecta]
Length = 418
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 140/313 (44%), Gaps = 4/313 (1%)
Query: 5 SRLLSCSFSTTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTV 64
S + + T T ++ S + Y E+ R + + + +FR +
Sbjct: 49 SAVFAAJLETKGTQISDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVI 108
Query: 65 QRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCE 124
+ L K F+ + E + + F L+ + K A+ VFD +
Sbjct: 109 EHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLR 168
Query: 125 QTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANT 184
+V+SFN L+ + DE L K+ G++PD+ +Y+ +I + +D AN
Sbjct: 169 PSVVSFNTLMNGYIKLGDLDEGFRL-KNAMQASGVQPDVYTYSVLINGLCKESKMDDANE 227
Query: 185 LLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLA 244
L EM G+ + +TF TL+ G NGR A +I+ M++ ++ P++ +YN + GL
Sbjct: 228 LFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYXQMLSQSLSPDLITYNTLIYGLC 287
Query: 245 IEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA---KRWYNKSGCGMNKA 301
+ K+A +L EM K + PD T+ LI G EG+LE A ++ K ++
Sbjct: 288 KKGDLKQAQDLXDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDXV 347
Query: 302 IFKLLVPFVCEKG 314
+ L+ +C++G
Sbjct: 348 AYTALISGLCQEG 360
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 83/173 (47%), Gaps = 1/173 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K + A +++ +M ++ ++++N L+ + L ++ K
Sbjct: 247 LIDGHCKNGRVDLAMEIYXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEMSMK- 305
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD ++Y T+I +G L++A M K+ IRLD + + L+ G GR DA
Sbjct: 306 GLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDXVAYTALISGLCQEGRSVDA 365
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
EK+ M+++ ++P + +Y ++ + +L+ EM+ P V T
Sbjct: 366 EKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418
>gi|302784232|ref|XP_002973888.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
gi|300158220|gb|EFJ24843.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
Length = 399
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 120/270 (44%), Gaps = 14/270 (5%)
Query: 98 LIALYGKAAMFENARKVFDEM---PGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLP 154
L+ + A + A + EM PG T +N + A S K E + K++
Sbjct: 24 LVRAHCLAGELQAAMDLLREMEQQPGM--APTPSMYNFFVHALCKSGKVPEAMEVVKNMK 81
Query: 155 HKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRF 214
+PD+V++NT+I G LD A +L EME+ G +L+T+NTL+ G S GR
Sbjct: 82 DG-ACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRS 140
Query: 215 ADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE-INPDVFTFYA 273
+A + M M P+ ++YNA + G + +A + EM+ + +PD FT+
Sbjct: 141 GEAVLV---MQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSI 197
Query: 274 LIKGFVNEGNLEEA----KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSE 329
LI G NL +A + + C + F LV C+ DLD A L
Sbjct: 198 LINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEH 257
Query: 330 RCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
C D ++D L + V++ L+E
Sbjct: 258 GCAPDVVTYSTIIDGLCRCGDVDKGFALLE 287
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 131/313 (41%), Gaps = 16/313 (5%)
Query: 18 ATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIE 77
A P + + K + ++ K D G + + + + L A R +
Sbjct: 51 APTPSMYNFFVHALCKSGKVPEAMEVVKNMKD-GACKPDVVTFNTLIAGLCKAGRLDEAQ 109
Query: 78 EILEHQKQYKDISKEGFTARLIA----LYGKAAMFENARKVFDEMPGRNCEQTVLSFNAL 133
++L+ ++ + GF A L+ + G ++ + V M G ++NA+
Sbjct: 110 QVLD------EMERSGFAANLVTYNTLINGLSSAGRSGEAVL-VMQGMTTTPDTQTYNAI 162
Query: 134 LGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEM-EKK 192
+ S + D G +++ + G PD +Y+ +I +L A+ LL EM +K
Sbjct: 163 IHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRK 222
Query: 193 GIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKA 252
++ FNTL+ G+ A ++ +M+ P+V +Y+ +DGL K
Sbjct: 223 DCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKG 282
Query: 253 LELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPF 309
L+ +M S+ PDV T+ L+ G G + EA R + GC N + L+
Sbjct: 283 FALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDG 342
Query: 310 VCEKGDLDFAFNL 322
+C+ LD A +L
Sbjct: 343 LCKIDKLDMANDL 355
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 122/266 (45%), Gaps = 9/266 (3%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LIA KA + A++V DEM ++++N L+ ++ + E + + +
Sbjct: 95 LIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQGMT--- 151
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKK-GIRLDLITFNTLLLGFYSNGRFAD 216
PD +YN II F G +D A L EM+++ G D T++ L+ G +
Sbjct: 152 -TTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRK 210
Query: 217 AEKIWETMVNM-NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
A+++ + M+ + +V ++N +DG + +A EL+ M PDV T+ +I
Sbjct: 211 ADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTII 270
Query: 276 KGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCL 332
G G++++ K GC + + +LV +C+ G + A L KR + C
Sbjct: 271 DGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCT 330
Query: 333 VDQAPLQLVVDRLAKELRVEEAKELV 358
+ LV D L K +++ A +L+
Sbjct: 331 PNAVTYSLVFDGLCKIDKLDMANDLL 356
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 101/222 (45%), Gaps = 3/222 (1%)
Query: 56 NTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFT-ARLIALYGKAAMFENARKV 114
+T Y + + LE KQ S + FT + LI K++ A ++
Sbjct: 155 DTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADEL 214
Query: 115 FDEMPGR-NCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAF 173
EM GR +C +V++FN L+ ++ D L + G PD+V+Y+TII
Sbjct: 215 LQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEH-GCAPDVVTYSTIIDGL 273
Query: 174 VDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNV 233
G +D LL +M +G + D++T+ L+ G G+ +A ++ + M+ PN
Sbjct: 274 CRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNA 333
Query: 234 RSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
+Y+ DGL + A +L+ +R K DV F AL+
Sbjct: 334 VTYSLVFDGLCKIDKLDMANDLLTSIRDKGRITDVVAFEALL 375
>gi|410109891|gb|AFV61025.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
cujabensis]
Length = 409
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 136/283 (48%), Gaps = 10/283 (3%)
Query: 86 YKDISKEGFTARL------IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
Y++I + G+ A L + + K A+ VFD + +V+S+N L+ +
Sbjct: 126 YEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIR 185
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
DE L K G PD+ +Y+ +I + +D AN L EM KG+ + +
Sbjct: 186 LGDLDEGFRL-KSAMLASGXXPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNXV 244
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
TF TL+ G NGR A +I++ M++ ++ P++ +YN + GL + K+A +L+ EM
Sbjct: 245 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEM 304
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLEEA---KRWYNKSGCGMNKAIFKLLVPFVCEKGDL 316
K + PD FT+ LI G EG+L+ A ++ + ++ + L+ +C++G
Sbjct: 305 SXKGLKPDKFTYTTLIDGCCKEGDLDTAFXHRKRMIQENIRLDDVAYTALISGLCQEGRS 364
Query: 317 DFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
A + + S D ++++ K+ V + +L++
Sbjct: 365 VDAEKMLREMLSVGLXPDAGTYTMIINEFCKKGDVWKGSKLLK 407
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 78/162 (48%), Gaps = 1/162 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K + A +++ +M ++ ++++N L+ + L ++ K
Sbjct: 249 LIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSXK- 307
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD +Y T+I +G LD+A M ++ IRLD + + L+ G GR DA
Sbjct: 308 GLKPDKFTYTTLIDGCCKEGDLDTAFXHRKRMIQENIRLDDVAYTALISGLCQEGRSVDA 367
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
EK+ M+++ + P+ +Y ++ + K +L+ EM
Sbjct: 368 EKMLREMLSVGLXPDAGTYTMIINEFCKKGDVWKGSKLLKEM 409
>gi|255660856|gb|ACU25597.1| pentatricopeptide repeat-containing protein [Bouchea fluminensis]
Length = 418
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 133/282 (47%), Gaps = 10/282 (3%)
Query: 86 YKDISKEGFTARL------IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
YK+I + G+ L + + K A+ VFD + + +V+SFN L+ +
Sbjct: 124 YKEILECGYPPSLYFFNILMHRFCKEGEMRLAQMVFDAITKWSLRPSVVSFNTLMNGYIR 183
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
DE L K H G++PD+ +Y+ +I + +D AN +L EM G+ + +
Sbjct: 184 LGDLDEGFRL-KSAMHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGV 242
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
TF TL+ G NG+ A +I++ M++ P++ +YN + GL +A +LV EM
Sbjct: 243 TFTTLIDGHCKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEM 302
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLE---EAKRWYNKSGCGMNKAIFKLLVPFVCEKGDL 316
K + PD T+ LI G EG+LE E ++ + +++ + L+ +C +G
Sbjct: 303 IMKGLKPDKITYTTLIDGSCKEGDLEITFELRKRMIRENIRLDEVTYTALISGLCREGRA 362
Query: 317 DFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
A + + + D ++++ K V+ A +L+
Sbjct: 363 GDAEKMLREMLTVGLKPDNGTYTMIMNEFCKTGDVKTASKLL 404
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 83/173 (47%), Gaps = 1/173 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K + A +++ +M + ++++N L+ + L +++ K
Sbjct: 247 LIDGHCKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMIMK- 305
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD ++Y T+I +G L+ L M ++ IRLD +T+ L+ G GR DA
Sbjct: 306 GLKPDKITYTTLIDGSCKEGDLEITFELRKRMIRENIRLDEVTYTALISGLCREGRAGDA 365
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
EK+ M+ + ++P+ +Y ++ K A +L+ EM+ P V T
Sbjct: 366 EKMLREMLTVGLKPDNGTYTMIMNEFCKTGDVKTASKLLREMQRNGPVPGVVT 418
>gi|255660938|gb|ACU25638.1| pentatricopeptide repeat-containing protein [Citharexylum
montevidense]
Length = 481
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 142/320 (44%), Gaps = 34/320 (10%)
Query: 73 FRWIEE--ILEHQKQYK---------------------DISKEGFT------ARLIALYG 103
FRW+Z + EH ++ D+ K+G +I YG
Sbjct: 32 FRWVZRSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLQWDEDLWVLMIDSYG 91
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
KA + + + K+F +M E+T+ S++ L + ++ F + + GIEP
Sbjct: 92 KAGIVQESVKLFHKMEELGVERTIKSYDVLFKVILRRGRYMMAKRYFNKMLSE-GIEPTR 150
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
++N +I F G +++A +M+ + I D+IT+NT++ G+Y + +AEK +
Sbjct: 151 HTFNIMIWGFFLSGKVETAXRFFEDMKSRDITPDVITYNTMINGYYRVKKMEEAEKYFVE 210
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M N+ P V ++ + G + AL LV EM+ I P+ T+ + G N
Sbjct: 211 MKGRNIEPTVVTHTTLIKGYVAVDRVDDALRLVEEMKGFGIKPNAITYSTXLPGLCNAEK 270
Query: 284 LEEA----KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQ 339
+ EA K +K + +IF L+ C+ G+LD A ++ K +
Sbjct: 271 MSEARSXLKEMVDKYIAPTDNSIFLRLISGQCKAGNLDAAADVLKAMIRLSVPTEAGHYG 330
Query: 340 LVVDRLAKELRVEEAKELVE 359
++++ K ++ ++A L++
Sbjct: 331 VLIENYCKAVQYDKAISLLD 350
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 101/246 (41%), Gaps = 47/246 (19%)
Query: 87 KDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
+DI+ + T +I Y + E A K F EM GRN E TV++ L+ V + D+
Sbjct: 179 RDITPDVITYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTHTTLIKGYVAVDRVDD 238
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTII----------------KAFVDK------------- 176
L +++ GI+P+ ++Y+T + K VDK
Sbjct: 239 ALRLVEEMK-GFGIKPNAITYSTXLPGLCNAEKMSEARSXLKEMVDKYIAPTDNSIFLRL 297
Query: 177 -------GSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
G+LD+A +L M + + + + L+ + ++ A + + ++ ++
Sbjct: 298 ISGQCKAGNLDAAADVLKAMIRLSVPTEAGHYGVLIENYCKAVQYDKAISLLDKLIEKDI 357
Query: 230 --RPNVRS------YNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
RP S YN ++ L QT KA LV ++ + D LI+G E
Sbjct: 358 ILRPQSTSHMEPSAYNPLIEYLCNNGQTAKAETLVRQLMKLGVQ-DATALNTLIRGHSQE 416
Query: 282 GNLEEA 287
G+ + A
Sbjct: 417 GSPDSA 422
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/199 (20%), Positives = 82/199 (41%), Gaps = 39/199 (19%)
Query: 128 LSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLY 187
L +N L GA KK + F+ + E + ++ II+ L+ A +L
Sbjct: 14 LVYNVLHGA----KKSEHALQFFRWVZRSNLFEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 188 EMEKKGIRLD-----------------------------------LITFNTLLLGFYSNG 212
+M KKG++ D + +++ L G
Sbjct: 70 DMPKKGLQWDEDLWVLMIDSYGKAGIVQESVKLFHKMEELGVERTIKSYDVLFKVILRRG 129
Query: 213 RFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFY 272
R+ A++ + M++ + P ++N + G + + + A +M+S++I PDV T+
Sbjct: 130 RYMMAKRYFNKMLSEGIEPTRHTFNIMIWGFFLSGKVETAXRFFEDMKSRDITPDVITYN 189
Query: 273 ALIKGFVNEGNLEEAKRWY 291
+I G+ +EEA++++
Sbjct: 190 TMINGYYRVKKMEEAEKYF 208
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 87/204 (42%), Gaps = 17/204 (8%)
Query: 37 LKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTA 96
LK +VDK+ +D I+ + A ++L+ + ++ G
Sbjct: 278 LKEMVDKYIAPTD-------NSIFLRLISGQCKAGNLDAAADVLKAMIRLSVPTEAGHYG 330
Query: 97 RLIALYGKAAMFENARKVFDEM--------PGRNCEQTVLSFNALLGACVNSKKFDEVDG 148
LI Y KA ++ A + D++ P ++N L+ N+ + + +
Sbjct: 331 VLIENYCKAVQYDKAISLLDKLIEKDIILRPQSTSHMEPSAYNPLIEYLCNNGQTAKAET 390
Query: 149 LFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
L + L KLG++ D + NT+I+ +GS DSA LL M ++ + +N+L+ +
Sbjct: 391 LVRQL-MKLGVQ-DATALNTLIRGHSQEGSPDSAFELLKIMLRRKXDSEKSAYNSLVQCY 448
Query: 209 YSNGRFADAEKIWETMVNMNVRPN 232
ADA+ ++M+ P+
Sbjct: 449 LKKSEPADAKTALDSMIENGHLPD 472
>gi|255660812|gb|ACU25575.1| pentatricopeptide repeat-containing protein [Glandularia incisa]
Length = 418
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 141/313 (45%), Gaps = 4/313 (1%)
Query: 5 SRLLSCSFSTTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTV 64
S + + T T ++ S + Y E+ R + + + +FR +
Sbjct: 49 SAVFAAILETKGTQISDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVL 108
Query: 65 QRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCE 124
+ L K F+ + E + + F L+ + K A+ VFD +
Sbjct: 109 EHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLR 168
Query: 125 QTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANT 184
+V+SFN L+ + DE L K+ G++PD+ +Y+ +I + +D AN
Sbjct: 169 PSVVSFNTLMNGYIKLGNLDEGFRL-KNAMQASGVQPDVYTYSVLINGLCKESKMDDANE 227
Query: 185 LLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLA 244
L EM G+ + +TF TL+ G NGR A +I++ M++ ++ P++ +YN + GL
Sbjct: 228 LFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLC 287
Query: 245 IEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA---KRWYNKSGCGMNKA 301
+ K+A +L EM K + PD T+ LI G EG+LE A ++ K ++
Sbjct: 288 KKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDV 347
Query: 302 IFKLLVPFVCEKG 314
+ L+ +C++G
Sbjct: 348 AYTALISGLCQEG 360
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 83/173 (47%), Gaps = 1/173 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K + A +++ +M ++ ++++N L+ + L ++ K
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMK- 305
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD ++Y T+I +G L++A M K+ IRLD + + L+ G GR DA
Sbjct: 306 GLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDA 365
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
EK+ M+++ ++P + +Y ++ + +L+ EM+ P V T
Sbjct: 366 EKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYAPSVVT 418
>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
Length = 1202
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 127/262 (48%), Gaps = 2/262 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI YG+ F+ + EM V+S+ L+ K E + +D+ +
Sbjct: 838 LIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDR- 896
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ P++ YN +I KG ++ A EM KKGI L+L+T+NTL+ G NG+ A+A
Sbjct: 897 GVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEA 956
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
E + + ++P+V +YN+ + G ++ + L EM++ I P + T++ LI
Sbjct: 957 EDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLISL 1016
Query: 278 FVNEGNLEEAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAP 337
EG +E K+ + + + ++ ++ GD+D AFNL K+ + +D+
Sbjct: 1017 CTKEG-IELTKKIFGEMSLQPDLLVYNGVLHCYAVHGDMDKAFNLQKQMIEKSIGLDKTT 1075
Query: 338 LQLVVDRLAKELRVEEAKELVE 359
++ K ++ E + L++
Sbjct: 1076 YNSLILGQLKVGKLCEVRSLID 1097
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 114/223 (51%), Gaps = 12/223 (5%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNS---KKFDEVDGLFKDLPHKLGI 159
K ++A ++FDEM R +++++N L+ G C + K F + + D I
Sbjct: 599 KVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKAD-----NI 653
Query: 160 EPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEK 219
EP L+++NT++K G ++ A +L EM+ +G D TF+ L G+ SN + A
Sbjct: 654 EPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALG 713
Query: 220 IWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFV 279
++ET V+ ++ N + + L+ L E Q +KA E++G +K + P+ + +I G+
Sbjct: 714 VYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYS 773
Query: 280 NEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFA 319
+G+L A+ + K G + + L+ CE GD++ A
Sbjct: 774 RKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENA 816
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 106/252 (42%), Gaps = 9/252 (3%)
Query: 45 KKSSDLGRFRT--NTGI----YTGTV--QRLANAKRFRWIEEILEHQKQYKDISKEGFTA 96
K + LG + T ++G+ YT ++ L + EEIL + + E
Sbjct: 707 KADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYN 766
Query: 97 RLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHK 156
+I Y + AR D M + + L++N L+ + + + K
Sbjct: 767 TMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLK 826
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
G+ P + +YN +I + K D LL EME G +++++ TL+ + +
Sbjct: 827 -GVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLE 885
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
A+ + M + V PNVR YN +DG + + + A EM K I ++ T+ LI
Sbjct: 886 AQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLID 945
Query: 277 GFVNEGNLEEAK 288
G G L EA+
Sbjct: 946 GLSMNGKLAEAE 957
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 91/198 (45%), Gaps = 4/198 (2%)
Query: 149 LFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
LF + H I P + YN +I + A L EM + + LIT+NTL+ G+
Sbjct: 574 LFNRMKHD-RISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGY 632
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDV 268
+G + K+ E M N+ P++ ++N L GL + A ++ EM+ + PD
Sbjct: 633 CKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDA 692
Query: 269 FTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKR 325
FTF L G+ + + A Y SG MN +L+ +C++G ++ A + R
Sbjct: 693 FTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGR 752
Query: 326 TFSERCLVDQAPLQLVVD 343
++ + ++ ++D
Sbjct: 753 EMAKGLVPNEVLYNTMID 770
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 101/207 (48%), Gaps = 6/207 (2%)
Query: 116 DEMPGRNCEQTVLSFNALLGACVN--SKKFDEVDGLFK-DLPHKLGIEPDLVSYNTIIKA 172
+E+ GR + ++ L ++ S+K D V K D K G++PD ++YN +I+
Sbjct: 747 EEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRT 806
Query: 173 FVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPN 232
F + G +++A + +M+ KG+ + T+N L+ G+ F + + M + PN
Sbjct: 807 FCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPN 866
Query: 233 VRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN 292
V SY ++ L + +A + +M + ++P+V + LI G ++G +E+A R+
Sbjct: 867 VVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSE 926
Query: 293 ---KSGCGMNKAIFKLLVPFVCEKGDL 316
K G +N + L+ + G L
Sbjct: 927 EMFKKGIELNLVTYNTLIDGLSMNGKL 953
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 97/217 (44%), Gaps = 11/217 (5%)
Query: 78 EILEHQKQYKDISKEGFTA------RLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFN 131
++ E + +IS++G LI+ Y A + +++EM + T+ +++
Sbjct: 952 KLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYH 1011
Query: 132 ALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEK 191
L+ C E L K + ++ ++PDL+ YN ++ + G +D A L +M +
Sbjct: 1012 LLISLCTK-----EGIELTKKIFGEMSLQPDLLVYNGVLHCYAVHGDMDKAFNLQKQMIE 1066
Query: 192 KGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKK 251
K I LD T+N+L+LG G+ + + + M + P +Y+ + G K
Sbjct: 1067 KSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDIIVKGHCEMKDYMG 1126
Query: 252 ALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
A EM+ K + DV L+ G E +EA+
Sbjct: 1127 AYVWYREMQEKGLLLDVCIGDELVSGLKEEWRSKEAE 1163
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 96/260 (36%), Gaps = 67/260 (25%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI K + A+ V +M R V +N L+ C + K ++ F + K
Sbjct: 873 LINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDA-FRFSEEMFKK 931
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
GIE +LV+YNT+I G L A +L E+ +KG++ D+ T+N+L+ G+ G
Sbjct: 932 GIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRC 991
Query: 218 EKIWETMVNMNVRPNVRS-------------------------------YNARLDGLAIE 246
++E M ++P +++ YN L A+
Sbjct: 992 IALYEEMKTSGIKPTLKTYHLLISLCTKEGIELTKKIFGEMSLQPDLLVYNGVLHCYAVH 1051
Query: 247 KQTKKAL-----------------------------------ELVGEMRSKEINPDVFTF 271
KA L+ EM+++E+ P+ T+
Sbjct: 1052 GDMDKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTY 1111
Query: 272 YALIKGFVNEGNLEEAKRWY 291
++KG + A WY
Sbjct: 1112 DIIVKGHCEMKDYMGAYVWY 1131
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 116/272 (42%), Gaps = 5/272 (1%)
Query: 91 KEGFTARLIA-LYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGL 149
K F+ L++ L ++ M A +F + + S LL V +K+F +
Sbjct: 480 KHDFSYLLLSVLLNESKMISEAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRVTINV 539
Query: 150 FKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFY 209
F ++ P Y I+A V + L M+ I + +N L+ G
Sbjct: 540 FLNILES-DFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLC 598
Query: 210 SNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVF 269
+ DAE++++ M+ + P++ +YN +DG + +K+ ++ M++ I P +
Sbjct: 599 KVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLI 658
Query: 270 TFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRT 326
TF L+KG G +E+A+ + G + F +L D A + +
Sbjct: 659 TFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETA 718
Query: 327 FSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
++ ++++ L KE ++E+A+E++
Sbjct: 719 VDSGLKMNAYTCSILLNALCKEGQIEKAEEIL 750
>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 123/237 (51%), Gaps = 4/237 (1%)
Query: 124 EQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSAN 183
E ++++F LL K D+V L+ D+ + G++P++ +YN II + G + A
Sbjct: 129 EPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVR-GLQPNVYTYNVIINSLSKSGKANEAL 187
Query: 184 TLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
L +MEK G +++ ++TL+ G+ G+ +A +++ MV+ PNV +Y + ++G
Sbjct: 188 GFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGY 247
Query: 244 AIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK---RWYNKSGCGMNK 300
++ ++A++L+ E K + PD+ TF +I G G A+ R+ G N
Sbjct: 248 CKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNI 307
Query: 301 AIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
+ +L+ +C+ G+L+ AF L + + +++D L K ++++ KEL
Sbjct: 308 MTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKEL 364
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 132/304 (43%), Gaps = 40/304 (13%)
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
FT L L + M + ++D+M R + V ++N ++ + S K +E G K +
Sbjct: 135 FTTLLNGLCMEGKM-DQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQM 193
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANT----------------------------- 184
K+G P++V+Y+T+I + +G +D A +
Sbjct: 194 -EKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIER 252
Query: 185 ------LLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNA 238
LL E +KG+ D++TF T++ G GR A++++ + PN+ +Y
Sbjct: 253 IEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGV 312
Query: 239 RLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SG 295
LDGL ++A L EM+ + P++ + LI G +++ K +++ G
Sbjct: 313 LLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEG 372
Query: 296 CGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAK 355
N + LV +C++G + A L ++ + C D+ +++ + A+
Sbjct: 373 LKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMAR 432
Query: 356 ELVE 359
+LVE
Sbjct: 433 QLVE 436
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 93/202 (46%), Gaps = 3/202 (1%)
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
P +V ++ + + V G ++ L E+E GI D+ + + L+ F R +
Sbjct: 60 PCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFGLSV 119
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
++ + + P++ ++ L+GL +E + + + L +M + + P+V+T+ +I
Sbjct: 120 LSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSK 179
Query: 281 EGNLEEA---KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAP 337
G EA + K GC N + L+ C +G +D A ++ S+ C +
Sbjct: 180 SGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYT 239
Query: 338 LQLVVDRLAKELRVEEAKELVE 359
+++ K R+EEA +L++
Sbjct: 240 YTSLMNGYCKIERIEEAVQLLD 261
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 70/154 (45%), Gaps = 9/154 (5%)
Query: 80 LEHQKQYKDISKEGFTARLIALYG-------KAAMFENARKVFDEMPGRNCEQTVLSFNA 132
L Q+ ++ I G T ++ YG K E A +F EM + ++ +
Sbjct: 289 LAAQQLFRYICAHGHTPNIMT-YGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTI 347
Query: 133 LLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKK 192
L+ + K + LF L + G++P++ +Y ++ A +G + A+ L +ME+
Sbjct: 348 LIDSLCKCGKIKDGKELFSRLIDE-GLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEED 406
Query: 193 GIRLDLITFNTLLLGFYSNGRFADAEKIWETMVN 226
G D +N ++ GF + + A ++ E MVN
Sbjct: 407 GCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVN 440
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 1/103 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI K ++ +++F + + V ++ AL+GA E LF+ +
Sbjct: 348 LIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEED- 406
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLIT 200
G PD +YN II+ F+ A L+ EM +G D T
Sbjct: 407 GCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAAT 449
>gi|410109949|gb|AFV61054.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
turbinata]
Length = 413
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 141/299 (47%), Gaps = 14/299 (4%)
Query: 86 YKDISKEGFTARL------IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
Y++I + G+ A L + + K A+ VFD + +V+S+N L+ +
Sbjct: 112 YEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIR 171
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
DE L K G++PD+ +Y+ +I + +D AN L EM KG+ + +
Sbjct: 172 LGDLDEGFRL-KSAMLANGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGV 230
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
TF TL+ G NGR A +I++ M++ ++ P++ +YN + GL K+A +L+ EM
Sbjct: 231 TFTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKNGDLKQAHDLIDEM 290
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLEEA---KRWYNKSGCGMNKAIFKLLVPFVCEKGDL 316
K + PD FT+ LI G EG+L+ A ++ + ++ + L+ +C++G
Sbjct: 291 SMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQENIRLDDVAYTALISGLCQEGQS 350
Query: 317 DFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA----KELVELGKTNSYCRYNL 371
A + + S D ++++ K+ V + KE+ G S YN+
Sbjct: 351 VDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNV 409
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 88/180 (48%), Gaps = 1/180 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K + A +++ M ++ ++++N L+ + + L ++ K
Sbjct: 235 LIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKNGDLKQAHDLIDEMSMK- 293
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD +Y T+I +G LD+A M ++ IRLD + + L+ G G+ DA
Sbjct: 294 GLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQENIRLDDVAYTALISGLCQEGQSVDA 353
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
EK+ M+++ ++P++ +Y ++ + K +L+ EM+ P V T+ L+ G
Sbjct: 354 EKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMNG 413
>gi|124360736|gb|ABN08713.1| Pentatricopeptide repeat [Medicago truncatula]
Length = 479
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 122/254 (48%), Gaps = 18/254 (7%)
Query: 86 YKDISKEGFTARLI-------ALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACV 138
YK++ ++G ++ AL E+A ++F EMP R C+ ++ L+
Sbjct: 143 YKEMREKGIPPTVVSLNILIKALCKNEETVESAFRLFREMPNRGCQPDSYTYGTLINGLC 202
Query: 139 NSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL 198
K + L ++ K G+ P +VSY ++I +LD A LL EM GI ++
Sbjct: 203 KLGKISQAKELLDEMEEK-GLSPSVVSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNV 261
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
T+++L+ G +G + A ++ E MV + PN+ +Y+ ++GL E + ++A+E++
Sbjct: 262 FTYSSLMDGLCKSGHSSQAMELLEVMVRRRLLPNMVTYSTLINGLCKEGKHREAVEILDR 321
Query: 259 MRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKA-------IFKLLVP 308
MR + + PD + +I G N +EA + ++ G N+A + ++V
Sbjct: 322 MRLQGLKPDAGMYGRIISGLCAACNYQEAANFIDEMALGGISPNRASWTFHVKMHNMVVQ 381
Query: 309 FVCEKGDLDFAFNL 322
+C D AF L
Sbjct: 382 GLCNNVDPTRAFQL 395
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 73/169 (43%), Gaps = 4/169 (2%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G D ++ +I V A +L M+++ + F T+ G+ R DA
Sbjct: 45 GFRHDHNTFGAMIHRLVSVNQFRPAEGMLERMKQEDCEVTEDVFLTICRGYGRVHRPLDA 104
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+++ M + V+P +SY D L E K+A+ EMR K I P V + LIK
Sbjct: 105 IRVFHKMEDFQVKPTQKSYLTVFDILVEENHVKRAIGFYKEMREKGIPPTVVSLNILIKA 164
Query: 278 FV-NEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
NE +E A R + + GC + + L+ +C+ G + A L
Sbjct: 165 LCKNEETVESAFRLFREMPNRGCQPDSYTYGTLINGLCKLGKISQAKEL 213
Score = 44.7 bits (104), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 97/245 (39%), Gaps = 10/245 (4%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
S+I G+ + NNL ++ ++ G N Y+ + L + E+LE +
Sbjct: 231 SLIHGLCQSNNLDEAIELLEEMIING-IEPNVFTYSSLMDGLCKSGHSSQAMELLEVMVR 289
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
+ + + LI K A ++ D M + + + ++ + + E
Sbjct: 290 RRLLPNMVTYSTLINGLCKEGKHREAVEILDRMRLQGLKPDAGMYGRIISGLCAACNYQE 349
Query: 146 VDGLFKDLPHKLGIEPDLVSY-------NTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL 198
++ GI P+ S+ N +++ + A L M +GI +++
Sbjct: 350 AANFIDEMALG-GISPNRASWTFHVKMHNMVVQGLCNNVDPTRAFQLYLSMRTRGISVEI 408
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALE-LVG 257
TF+ L+ F G A +I E M+ P+ +N + GL K+ ++ E LV
Sbjct: 409 GTFDCLVKCFCKRGDLNKAARILEEMILDGCIPDEGMWNVLMCGLWDRKKVRETTELLVA 468
Query: 258 EMRSK 262
E++ K
Sbjct: 469 ELKQK 473
>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Brachypodium distachyon]
Length = 810
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 134/288 (46%), Gaps = 10/288 (3%)
Query: 81 EHQKQYKDISKEGFTARLIAL------YGKAAMFENARKVFDEMPGRNCEQTVLSFNALL 134
E K Y ++ EGF ++ Y F+NA + DEM ++N L+
Sbjct: 454 EAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLI 513
Query: 135 GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGI 194
+ EVDG+ K + G P +++YN+II FV G + SA T+ +M +KG+
Sbjct: 514 NGICMVDRVCEVDGMLKSFMSE-GFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGL 572
Query: 195 RLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALE 254
++IT+ + + G+ G A K+ + ++P++ +YNA ++G E AL+
Sbjct: 573 PPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQ 632
Query: 255 LVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVC 311
L+ + + P+ + +LI G+ N ++E ++Y K G + + + L+
Sbjct: 633 LLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFS 692
Query: 312 EKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ G++ FA L ++ + D + L + ++ AK+L+E
Sbjct: 693 KDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLE 740
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 106/220 (48%), Gaps = 7/220 (3%)
Query: 76 IEEILEHQKQYKDISKEGFTARLIAL------YGKAAMFENARKVFDEMPGRNCEQTVLS 129
++ + E K EGF ++ + KA M +A V+ +M + +++
Sbjct: 519 VDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIIT 578
Query: 130 FNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEM 189
+ + + + D + D+ + G++PD+V+YN +I F +G++ A LL +
Sbjct: 579 YTSFIDGYCRTGCSDMALKMLNDV-RRRGLQPDIVAYNALINGFCQEGNMSHALQLLVIL 637
Query: 190 EKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQT 249
K G+ + + +N+L+ G+ + + K +E+M+ + + +Y +DG + +
Sbjct: 638 LKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNV 697
Query: 250 KKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
ALEL EM +K PD FTF AL G G+++ AK+
Sbjct: 698 AFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKK 737
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 104/218 (47%), Gaps = 15/218 (6%)
Query: 86 YKDISKEGFTARLIAL------YGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACV 138
Y+ + ++G +I Y + + A K+ +++ R + ++++NAL+ G C
Sbjct: 564 YQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQ 623
Query: 139 N---SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIR 195
S + L KD G+ P+ V YN++I + + + + M K GI
Sbjct: 624 EGNMSHALQLLVILLKD-----GLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIV 678
Query: 196 LDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALEL 255
D T+ TL+ GF +G A A +++ M+ P+ ++ A GL A +L
Sbjct: 679 ADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKL 738
Query: 256 VGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK 293
+ EMR ++ P+VF + LI G++ + L+EA R +++
Sbjct: 739 LEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDE 776
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 102/218 (46%), Gaps = 5/218 (2%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
+++A +F+EM V ++N L+ + K E LF D K G++P + +YN
Sbjct: 383 WKDAVCLFEEMADSGLPD-VFTYNNLIHWHCQAHKLREALNLF-DRMKKAGVKPSINTYN 440
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
+++ + KG +D A L EM +G + +++T+ TL+ G+ + F +A + + M
Sbjct: 441 SLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQN 500
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
V N +YN ++G+ + + + ++ S+ P + T+ ++I GFV G + A
Sbjct: 501 GVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSA 560
Query: 288 KRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
Y + G N + + C G D A +
Sbjct: 561 FTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKM 598
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 76/158 (48%), Gaps = 2/158 (1%)
Query: 130 FNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEM 189
+N+L+ N EV ++ + K GI D +Y T+I F G++ A L EM
Sbjct: 649 YNSLITGYKNLNMMKEVSKFYESM-IKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEM 707
Query: 190 EKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQT 249
KG D TF L G +G A+K+ E M ++VRPNV YN ++G + +
Sbjct: 708 MAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKL 767
Query: 250 KKALELVGEMRSKEINPDVFTFYALI-KGFVNEGNLEE 286
++A L EM + I PD T+ L+ K F+ N +
Sbjct: 768 QEAFRLHDEMLNMGIQPDDTTYDILVSKKFLEADNCAD 805
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 96/224 (42%), Gaps = 3/224 (1%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K M E+A ++FDEMPG + + + A + +++ ++G +
Sbjct: 204 KEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREM-KEVGFDTCD 262
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
+Y T++ V G ++ A + EM G ++D+I TL+ G+ +A +++
Sbjct: 263 FTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKE 322
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
+ + P Y + G T+KA EL +M + + P F ++KG +N+
Sbjct: 323 TLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRR 382
Query: 284 LEEAKRWYNKSGCGMNKAIFKL--LVPFVCEKGDLDFAFNLCKR 325
++A + + +F L+ + C+ L A NL R
Sbjct: 383 WKDAVCLFEEMADSGLPDVFTYNNLIHWHCQAHKLREALNLFDR 426
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 77/175 (44%), Gaps = 3/175 (1%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ PD+ S ++ S A L EM +G R+D F+ L+ G DA
Sbjct: 152 GVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACLKEGMHEDA 211
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++++ M + P+ R Y + L +AL ++ EM+ + FT+ ++
Sbjct: 212 VRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFTYRTMVDV 271
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSE 329
V G +EEA R ++ +G M+ + L+ C + ++ A NL K T +
Sbjct: 272 LVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKD 326
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 25/152 (16%)
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
A + MV V P+++S L A K AL L EMR + D + F AL+
Sbjct: 141 ATDTYAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMS 200
Query: 277 GFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGD-----------LDFAFNL 322
+ EG E+A R +++ + ++ ++ L + +C+ GD + F+
Sbjct: 201 ACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDT 260
Query: 323 CKRTFSERCLVDQAPLQLVVDRLAKELRVEEA 354
C T+ + +VD L K R+EEA
Sbjct: 261 CDFTY-----------RTMVDVLVKTGRMEEA 281
>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
Length = 755
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 123/260 (47%), Gaps = 4/260 (1%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
KA + + A+ VF +M R + ++N L+ +++ K+ EV + +++ G+EPD
Sbjct: 208 KAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTH-GLEPDC 266
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
++Y ++ G A M +KGI+ D+ + LL G+ + G ++ +
Sbjct: 267 ITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDL 326
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
MV V PN R +N A + ++A+ + +MR + ++PDV +F ALI G
Sbjct: 327 MVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGR 386
Query: 284 LEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL 340
+++A +N+ G N +F LV +C G + A L + VD
Sbjct: 387 VDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNT 446
Query: 341 VVDRLAKELRVEEAKELVEL 360
++ L E RV EA+ L++L
Sbjct: 447 LMCNLCNEGRVMEAQRLIDL 466
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 101/186 (54%), Gaps = 1/186 (0%)
Query: 102 YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEP 161
Y K AM E A +F++M + V+SF AL+ A + D+ F + ++ G+ P
Sbjct: 346 YAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINE-GVTP 404
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
++ +++++ G + A L +E+ +GI +D + FNTL+ + GR +A+++
Sbjct: 405 NIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLI 464
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
+ M+ + VRPNV SYN + G + + +A +L+ M S + P+ FT+ L++G+
Sbjct: 465 DLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKA 524
Query: 282 GNLEEA 287
+++A
Sbjct: 525 RRVDDA 530
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 106/222 (47%), Gaps = 3/222 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + + E+ F + V+ + LL ++K+ DE + +
Sbjct: 96 LIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILLLRMSEF 155
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G PD+V+YNT+I F +G ++ A L EM +GI +++T+ T++ G A
Sbjct: 156 GCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRA 215
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ +++ M++ V+P+ +YN + G + K+ ++++ EM + + PD T+ L+
Sbjct: 216 KGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDY 275
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDL 316
G EA+ +++ + G + AI+ +L+ KG L
Sbjct: 276 LCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGAL 317
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 136/296 (45%), Gaps = 7/296 (2%)
Query: 25 GSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEIL-EHQ 83
G++I + K + V +F + + G N +++ V L ++ EE+ E
Sbjct: 375 GALIDALCKLGRVDDAVLQFNQMINEG-VTPNIFVFSSLVYGLCTVGKWEKAEELFFEVL 433
Query: 84 KQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKF 143
Q + F + L + + E A+++ D M V+S+N L+ + +
Sbjct: 434 DQGICVDAVFFNTLMCNLCNEGRVME-AQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRI 492
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT 203
DE L D+ G++P+ +Y +++ + +D A +L EM KG+ + T+NT
Sbjct: 493 DEAAKLL-DVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNT 551
Query: 204 LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
+L G + GRF++A +++ M+N + ++ +YN L+GL +A ++ + SK+
Sbjct: 552 ILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKD 611
Query: 264 INPDVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDL 316
D TF +I + G E+A + + G + ++L+ + E+G L
Sbjct: 612 PQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSL 667
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 103/225 (45%), Gaps = 4/225 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+A + + A K+ D M + ++ LL +++ D+ LF+++ K
Sbjct: 482 LVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMK- 540
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ P + +YNTI+ G AN L M + D+ T+N +L G N +A
Sbjct: 541 GVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEA 600
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
K++ + + + + + ++N + L + + A++L + + + PDV T+ + +
Sbjct: 601 FKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAEN 660
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFA 319
+ EG+L E ++ KSG N + LV + +GD+ A
Sbjct: 661 LIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGDISRA 705
>gi|255660854|gb|ACU25596.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 418
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 139/301 (46%), Gaps = 13/301 (4%)
Query: 67 LANAKRFRWIEEILEHQKQYKDISKEGFTARL------IALYGKAAMFENARKVFDEMPG 120
L + FR+ + + + YK++ + G+ A L + + K A+ VFD +
Sbjct: 108 LEHLMEFRYFKLVWDF---YKEVLECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITK 164
Query: 121 RNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLD 180
+V+SFN L+ + DE L K H G +PD+ +Y+ +I +G LD
Sbjct: 165 WGLRPSVVSFNTLINGYIKLGDLDEGFRL-KSAMHASGAQPDVYTYSILINGLCKEGKLD 223
Query: 181 SANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARL 240
AN L EM G+ + +TF TL+ G N + A +I++ M++ + P++ +YN +
Sbjct: 224 EANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLI 283
Query: 241 DGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCG 297
GL + + K+ +L+ EM + PD ++ LI G EG+LE A NK
Sbjct: 284 YGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESIR 343
Query: 298 MNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
++ + L+ +C +G A + + S D ++++ K+ + A +L
Sbjct: 344 LDDVAYTALISCLCREGRAGDAEKMLREMLSVGLKPDNGTYTMIINEFCKKRDSKTASKL 403
Query: 358 V 358
+
Sbjct: 404 L 404
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 87/173 (50%), Gaps = 1/173 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K + A +++ +M + ++++N L+ + +V L ++
Sbjct: 247 LIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMN- 305
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD +SY T+I +G L+ A L +M ++ IRLD + + L+ GR DA
Sbjct: 306 GLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRAGDA 365
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
EK+ M+++ ++P+ +Y ++ ++ +K A +L+ EM+ P V T
Sbjct: 366 EKMLREMLSVGLKPDNGTYTMIINEFCKKRDSKTASKLLREMQRDGPVPGVVT 418
>gi|242063942|ref|XP_002453260.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
gi|241933091|gb|EES06236.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
Length = 866
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 133/269 (49%), Gaps = 8/269 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLP--- 154
++A + K + E A ++ + M + V++FNA + A + + + +F+D+
Sbjct: 213 VVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQDMQEDW 272
Query: 155 -HKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
H L PD V+++ ++ F D G +D A L+ M G + ++N L G NGR
Sbjct: 273 QHGLP-RPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGR 331
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
+A+++ M + ++PN +YN + GL E + A + +RS ++PDV T+ +
Sbjct: 332 VGEAQELLREMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTS 391
Query: 274 LIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSER 330
L+ + ++GN+ A R + + GC N + +L+ + G A L +R +
Sbjct: 392 LLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKG 451
Query: 331 CLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+D A +++D L + R++ A ++V+
Sbjct: 452 YSLDTAGCNIIIDGLCRNSRLDVAMDIVD 480
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 113/270 (41%), Gaps = 38/270 (14%)
Query: 114 VFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAF 173
V D + C ++++ L+ A +FDE ++ K I PD V Y+T I +
Sbjct: 501 VSDSSISQRCLPDQITYSILISALCKEGRFDEAKKKLLEMIVK-DISPDSVIYDTFIHGY 559
Query: 174 VDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNV 233
G A +L +MEKKG T+N L+ GF + + K+ M + PNV
Sbjct: 560 CKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNV 619
Query: 234 RSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK 293
+YN+ + + KA+ L+ EM E+ P++ +F LIK + + A+ ++
Sbjct: 620 MTYNSLIKSFCQQGMVNKAMPLLDEMLQNELVPNITSFDLLIKAYCKITDFPSAQMVFDA 679
Query: 294 S--GCGMNKAIFKLLV-----------------------------PF------VCEKGDL 316
+ CG + ++ L+ P+ +CE G++
Sbjct: 680 ALRTCGQKEVLYCLMCTELTTYGKWIEAKNILEMALEMRVSIQSFPYKQIISGLCEVGEV 739
Query: 317 DFAFNLCKRTFSERCLVDQAPLQLVVDRLA 346
D A +L K ++R L D A V+D L
Sbjct: 740 DHAHSLLKLLIAKRHLFDPAAFMPVIDALG 769
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 144/335 (42%), Gaps = 35/335 (10%)
Query: 27 VIRGIYKENNL--KRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQK 84
++ G+ KE R V+ F +S G + YT + + IL+
Sbjct: 357 IVSGLCKEGKAFDARRVENFIRS---GVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMA 413
Query: 85 QYKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSK- 141
Q K + FT L+ +A A ++ + M + N ++ G C NS+
Sbjct: 414 Q-KGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYSLDTAGCNIIIDGLCRNSRL 472
Query: 142 --KFDEVDGLFKDLPHKLG------------------IEPDLVSYNTIIKAFVDKGSLDS 181
D VDG++++ LG PD ++Y+ +I A +G D
Sbjct: 473 DVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSSISQRCLPDQITYSILISALCKEGRFDE 532
Query: 182 ANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLD 241
A L EM K I D + ++T + G+ +G+ + A K+ M P+ R+YN +
Sbjct: 533 AKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIR 592
Query: 242 GLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGM 298
G + ++++ ++L+ EM+ K I+P+V T+ +LIK F +G + +A + ++
Sbjct: 593 GFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSLIKSFCQQGMVNKAMPLLDEMLQNELVP 652
Query: 299 NKAIFKLLVPFVCEKGDLDFA---FNLCKRTFSER 330
N F LL+ C+ D A F+ RT ++
Sbjct: 653 NITSFDLLIKAYCKITDFPSAQMVFDAALRTCGQK 687
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 132/323 (40%), Gaps = 59/323 (18%)
Query: 86 YKDISKEG-----FTARLI-ALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACV 138
YKD+ G FT L+ A E A++VFD MP RN SF L G C
Sbjct: 133 YKDLLLSGAQPDVFTRNLLLQALCDAGRMELAQRVFDAMPARN----EFSFGILARGYCR 188
Query: 139 NSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL 198
+ D + + +P +LV NT++ F +G ++ A L+ M +G+ ++
Sbjct: 189 AGRSIDALK-VLDGMPSM-----NLVVCNTVVAGFCKEGLVEEAERLVERMRVQGLAPNV 242
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETM----VNMNVRPN---------------------- 232
+TFN + GR DA +I++ M + RP+
Sbjct: 243 VTFNARISALCKAGRVLDAYRIFQDMQEDWQHGLPRPDQVTFDVMLSGFCDAGFVDEARV 302
Query: 233 -------------VRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFV 279
V SYN L GL + +A EL+ EM + I P+ +T+ ++ G
Sbjct: 303 LVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAQELLREMAHEGIQPNSYTYNIIVSGLC 362
Query: 280 NEGNLEEAKRWYN--KSGCGMNKAI-FKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQA 336
EG +A+R N +SG + + L+ C KG++ A + + C +
Sbjct: 363 KEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSF 422
Query: 337 PLQLVVDRLAKELRVEEAKELVE 359
+++ L + R EA+ L+E
Sbjct: 423 TYNVLLQSLWRAGRTTEAERLLE 445
>gi|225445222|ref|XP_002280919.1| PREDICTED: pentatricopeptide repeat-containing protein At5g21222
[Vitis vinifera]
gi|297738818|emb|CBI28063.3| unnamed protein product [Vitis vinifera]
Length = 636
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 115/221 (52%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMP 119
YT + L KRF+ I ++ ++ F +I + ++ + A K+F +M
Sbjct: 109 YTTLLAALTRQKRFKSIPSLISKLEKNGLKPDSVFFNAMINAFSESGNVKEAMKIFRKMK 168
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL 179
R C+ T +FN L+ N+ +E L + + ++P+ ++N++I+A+ +K +
Sbjct: 169 DRGCKPTTSTFNTLIKGYGNAGMPEECLKLLDLMSQEENVKPNDRTFNSLIRAWCNKKRI 228
Query: 180 DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNAR 239
A ++Y+M G++ D++T+NTL + NG + AE + M N V PN R+
Sbjct: 229 TEAWNVVYKMAASGLQPDVVTYNTLARAYAQNGETSRAEGMILEMQNNRVMPNERTCGII 288
Query: 240 LDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
++G E + K AL + MR+ ++P++ F +LIKGF++
Sbjct: 289 INGYCKEGKMKDALRFLYRMRNYGVHPNLVIFNSLIKGFLD 329
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 113/279 (40%), Gaps = 44/279 (15%)
Query: 98 LIALYGKAAMFENARKVFDEMPGR-NCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHK 156
LI YG A M E K+ D M N + +FN+L+ A N K+ E + +
Sbjct: 182 LIKGYGNAGMPEECLKLLDLMSQEENVKPNDRTFNSLIRAWCNKKRITEAWNVVYKMAAS 241
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTL------------------------------- 185
G++PD+V+YNT+ +A+ G A +
Sbjct: 242 -GLQPDVVTYNTLARAYAQNGETSRAEGMILEMQNNRVMPNERTCGIIINGYCKEGKMKD 300
Query: 186 ----LYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLD 241
LY M G+ +L+ FN+L+ GF ++ M V+P+V +++ ++
Sbjct: 301 ALRFLYRMRNYGVHPNLVIFNSLIKGFLDITDTDGVDEALTLMEEFGVKPDVVTFSTIMN 360
Query: 242 GLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW---YNKSGCGM 298
+ K E+ +M I PD+ F L KG+V G E+A+ KSG
Sbjct: 361 AWSSVGLMDKCQEIFDDMVKAGIEPDIHAFSILAKGYVRAGEPEKAESLLTAMGKSGVQP 420
Query: 299 NKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAP 337
N IF ++ C G +++A R + + C + P
Sbjct: 421 NVVIFTTIISGWCSAGKMEYA----SRVYEKMCEMGICP 455
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 89/166 (53%), Gaps = 1/166 (0%)
Query: 127 VLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLL 186
V++F+ ++ A + D+ +F D+ K GIEPD+ +++ + K +V G + A +LL
Sbjct: 352 VVTFSTIMNAWSSVGLMDKCQEIFDDM-VKAGIEPDIHAFSILAKGYVRAGEPEKAESLL 410
Query: 187 YEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIE 246
M K G++ +++ F T++ G+ S G+ A +++E M M + PN++++ + G
Sbjct: 411 TAMGKSGVQPNVVIFTTIISGWCSAGKMEYASRVYEKMCEMGICPNLKTFETLIWGYGEA 470
Query: 247 KQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN 292
K+ +KA EL+ M K + P T + + G EAKR N
Sbjct: 471 KEPQKAEELLQIMEQKGVAPVKSTIQLVADAWHALGLANEAKRIKN 516
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 130/306 (42%), Gaps = 36/306 (11%)
Query: 23 FIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEH 82
F ++I + N+K + F+K D G + T + ++ NA ++L+
Sbjct: 143 FFNAMINAFSESGNVKEAMKIFRKMKDRG-CKPTTSTFNTLIKGYGNAGMPEECLKLLDL 201
Query: 83 QKQYKDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSK 141
Q +++ T LI + A V +M + V+++N L A +
Sbjct: 202 MSQEENVKPNDRTFNSLIRAWCNKKRITEAWNVVYKMAASGLQPDVVTYNTLARAYAQNG 261
Query: 142 KFDEVDGLF------KDLPHK----------------------------LGIEPDLVSYN 167
+ +G+ + +P++ G+ P+LV +N
Sbjct: 262 ETSRAEGMILEMQNNRVMPNERTCGIIINGYCKEGKMKDALRFLYRMRNYGVHPNLVIFN 321
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
++IK F+D D + L ME+ G++ D++TF+T++ + S G ++I++ MV
Sbjct: 322 SLIKGFLDITDTDGVDEALTLMEEFGVKPDVVTFSTIMNAWSSVGLMDKCQEIFDDMVKA 381
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+ P++ +++ G + +KA L+ M + P+V F +I G+ + G +E A
Sbjct: 382 GIEPDIHAFSILAKGYVRAGEPEKAESLLTAMGKSGVQPNVVIFTTIISGWCSAGKMEYA 441
Query: 288 KRWYNK 293
R Y K
Sbjct: 442 SRVYEK 447
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 113/241 (46%), Gaps = 9/241 (3%)
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL 179
G N +TV S L+ + K E +F L + G P L++Y T++ A +
Sbjct: 64 GNNSCRTVRSRTKLMNILIEKGKPQEAQLIFNSLTEE-GHRPTLITYTTLLAALTRQKRF 122
Query: 180 DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNAR 239
S +L+ ++EK G++ D + FN ++ F +G +A KI+ M + +P ++N
Sbjct: 123 KSIPSLISKLEKNGLKPDSVFFNAMINAFSESGNVKEAMKIFRKMKDRGCKPTTSTFNTL 182
Query: 240 LDGLAIEKQTKKALELVGEMRSKE-INPDVFTFYALIKGFVNEGNLEEAKRW---YNKSG 295
+ G ++ L+L+ M +E + P+ TF +LI+ + N+ + EA W Y +
Sbjct: 183 IKGYGNAGMPEECLKLLDLMSQEENVKPNDRTFNSLIRAWCNKKRITEA--WNVVYKMAA 240
Query: 296 CGMNKAI--FKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEE 353
G+ + + L + G+ A + + R + ++ ++++ KE ++++
Sbjct: 241 SGLQPDVVTYNTLARAYAQNGETSRAEGMILEMQNNRVMPNERTCGIIINGYCKEGKMKD 300
Query: 354 A 354
A
Sbjct: 301 A 301
>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 576
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 119/255 (46%), Gaps = 4/255 (1%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
+ A +V C V++ L+ A + LF ++ +K G +PD+V+YN
Sbjct: 197 LKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNK-GCKPDVVTYN 255
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
+IK F G LD A L ++ G + D+I+ N +L S GR+ DA K+ TM+
Sbjct: 256 VLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRK 315
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
P+V ++N ++ L + KAL ++ M P+ +F LI+GF N ++ A
Sbjct: 316 GCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRA 375
Query: 288 KRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDR 344
+ GC + + +L+ +C+ G +D A + + S+ C V+D
Sbjct: 376 IEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDG 435
Query: 345 LAKELRVEEAKELVE 359
L K + E A EL+E
Sbjct: 436 LLKVGKAELAVELLE 450
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 97/196 (49%), Gaps = 1/196 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + + A + + M R C ++++N LL A K D+ + L K
Sbjct: 362 LIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSK- 420
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G P L+SYNT+I + G + A LL EM KG++ DLIT +++ G G+ +A
Sbjct: 421 GCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREA 480
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
K + + +RPN YN+ + GL +QT A++ + +M +K P T+ LIKG
Sbjct: 481 MKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKG 540
Query: 278 FVNEGNLEEAKRWYNK 293
EG E+A + N+
Sbjct: 541 ITYEGLAEDASKLSNE 556
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 118/251 (47%), Gaps = 4/251 (1%)
Query: 110 NARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTI 169
+A K+ M + C +V++FN L+ + + + +P K G P+ S+N +
Sbjct: 304 DAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMP-KHGHTPNSRSFNPL 362
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
I+ F + +D A L M +G D++T+N LL +G+ DA I + +
Sbjct: 363 IQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGC 422
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
P++ SYN +DGL + + A+EL+ EM K + PD+ T +++ G EG + EA +
Sbjct: 423 SPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMK 482
Query: 290 WYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLA 346
+++ + N I+ ++ +C+ A + ++ C +A ++ +
Sbjct: 483 FFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGIT 542
Query: 347 KELRVEEAKEL 357
E E+A +L
Sbjct: 543 YEGLAEDASKL 553
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 107/241 (44%), Gaps = 41/241 (17%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G PD+++ +I+ F G +A+ ++ +E+ G +D+ ++N L+ G+ +G +A
Sbjct: 109 GKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTSYNVLISGYCKSGEIEEA 168
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG-------------------- 257
++ + M V PN +Y+A L L + K+A++++G
Sbjct: 169 LRVLD---RMGVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDA 225
Query: 258 ---------------EMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMN 299
EMR+K PDV T+ LIKGF G L+EA R+ K GC +
Sbjct: 226 TCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPD 285
Query: 300 KAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+++ +C G A L + CL ++++ L ++ + +A ++E
Sbjct: 286 VISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLE 345
Query: 360 L 360
+
Sbjct: 346 M 346
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 67/147 (45%)
Query: 211 NGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
NG + + E M N P+V + A + +TK A +++G + DV +
Sbjct: 92 NGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTS 151
Query: 271 FYALIKGFVNEGNLEEAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSER 330
+ LI G+ G +EEA R ++ G N A + ++ +C++G L A + R +
Sbjct: 152 YNVLISGYCKSGEIEEALRVLDRMGVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSK 211
Query: 331 CLVDQAPLQLVVDRLAKELRVEEAKEL 357
C D +++D KE V +A +L
Sbjct: 212 CYPDVVTCTVLIDATCKESGVGQAMKL 238
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 103/278 (37%), Gaps = 53/278 (19%)
Query: 134 LGACVNSKKFDEVDGLFKDLPHKL--------GIE--PDLVSYNT--------IIKAFVD 175
LG CV + E GL +L H G+E PD V+ + ++ +
Sbjct: 32 LGNCVFAVSKYENSGLKGNLQHSERFSKGALNGVESSPDRVNTSLNFEESEIRHLRRLIR 91
Query: 176 KGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRS 235
G L+ + L M KG D+I L+ F GR +A +I + +V S
Sbjct: 92 NGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTS 151
Query: 236 YNARLDG--------------------------------LAIEKQTKKALELVGEMRSKE 263
YN + G L + K+A++++G +
Sbjct: 152 YNVLISGYCKSGEIEEALRVLDRMGVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSK 211
Query: 264 INPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAF 320
PDV T LI E + +A + +N+ GC + + +L+ C+ G LD A
Sbjct: 212 CYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAI 271
Query: 321 NLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
K+ S C D +++ L R +A +L+
Sbjct: 272 RFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLL 309
>gi|168026089|ref|XP_001765565.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683203|gb|EDQ69615.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 505
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 129/280 (46%), Gaps = 13/280 (4%)
Query: 40 LVDKFKKSSDL-------GRFR--TNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDIS 90
L+D F K+ L G+ R TN Y + L + + E+ K +S
Sbjct: 211 LIDAFGKTGQLERAFDFVGKSRSFTNEVTYNSLLSSLGRKGDIQGLMELFGQMKAKGLVS 270
Query: 91 KEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLF 150
E A LI G A E+ +++ EM + + +++ N +L + + + LF
Sbjct: 271 NELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFELF 330
Query: 151 KDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYS 210
+D+ K G+ D V+YN +I G LD+A LL EME+ G ++IT+NTL+ +
Sbjct: 331 QDMKFK-GLNADTVTYNILINGLGRAGKLDAAGALLLEMEENGCAPNIITYNTLISSYGK 389
Query: 211 NGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
+ A +++ M V PNV SY++ ++G +T A+ L EM+++ P+ T
Sbjct: 390 WSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRTDAAISLFREMKAEGCPPNHVT 449
Query: 271 FYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLV 307
+ LI + G A + + +GC M K LLV
Sbjct: 450 YNLLIDCLIRAGRFGAAMEYLREMRDAGCQMGKVTKSLLV 489
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 135/294 (45%), Gaps = 7/294 (2%)
Query: 67 LANAKRFRWIEEILEH-QKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQ 125
L A+R+ ++ ++E QK + + F LI +YG+A M E A +
Sbjct: 5 LGAARRYDDVQRLVESMQKDRTKLDTQLFNT-LIHIYGEANMMEKALQTLAAFTKEGGRP 63
Query: 126 TVLSFNALLGACVNSKKFDEVDGL--FKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSAN 183
T ++++++ V K D +GL +K + K PD ++N +I + ++ A
Sbjct: 64 TAYTYSSMIQ--VFMKGGDVQNGLLMYKQML-KAKFVPDHTTFNILIDSLAKADQVEEAC 120
Query: 184 TLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
+ +M K + D+ T+ L+ + GR K++E+M +PN+ +Y++ +
Sbjct: 121 NVFGDMFKLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAF 180
Query: 244 AIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKAIF 303
+ +A ++ +M K + PD T+ LI F G LE A + KS N+ +
Sbjct: 181 GSAGRVDEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERAFDFVGKSRSFTNEVTY 240
Query: 304 KLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
L+ + KGD+ L + ++ + ++ ++++RL RVE+ +L
Sbjct: 241 NSLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQL 294
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/334 (21%), Positives = 156/334 (46%), Gaps = 23/334 (6%)
Query: 35 NNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEG- 93
++++RLV+ +K R + +T ++ + A +E+ L+ + +KEG
Sbjct: 12 DDVQRLVESMQKD----RTKLDTQLFNTLIHIYGEAN---MMEKALQTLAAF---TKEGG 61
Query: 94 ----FT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDG 148
+T + +I ++ K +N ++ +M +FN L+ + + + +E
Sbjct: 62 RPTAYTYSSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACN 121
Query: 149 LFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
+F D+ KL + PD+ +Y +I++ G +D+ L M +G + +L T+++++ F
Sbjct: 122 VFGDM-FKLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAF 180
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDV 268
S GR +A I++ MV ++P+ +YN +D Q ++A + VG+ RS +
Sbjct: 181 GSAGRVDEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERAFDFVGKSRSF---TNE 237
Query: 269 FTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKR 325
T+ +L+ +G+++ + + G N+ + +L+ + G ++ + L
Sbjct: 238 VTYNSLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLE 297
Query: 326 TFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
D + V+D L+K RVE A EL +
Sbjct: 298 MVDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQ 331
>gi|255660842|gb|ACU25590.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
Length = 418
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 135/283 (47%), Gaps = 10/283 (3%)
Query: 86 YKDISKEGFTARL------IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
YK+I + G+ A L + + K A+ VFD + + +V+SFN L+ +
Sbjct: 124 YKEILECGYPASLYFFNILMHRFCKEGEIRLAQLVFDAITKWGLKPSVVSFNTLMNGYIK 183
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
DE L K+ H G +PD+ +Y+ +I + +D A+ L EM +KG+ + +
Sbjct: 184 MGILDEGFRL-KNAMHASGAQPDVYTYSVLINGLCKESKMDEAHELFDEMLEKGLVPNGV 242
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
TF TL+ G NG+ A +I++ +++ + P++ +YN + G + K+ +L+ EM
Sbjct: 243 TFTTLIDGHCKNGKLDLAMEIYKQILSQGLSPDLITYNTLIYGFCKKGDLKQTRDLIDEM 302
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDL 316
K + PD T+ LI G EG+LE A + K ++ ++ L+ +C++G
Sbjct: 303 SMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKKMIEENIRLDDVVYTALISGLCKEGRS 362
Query: 317 DFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
A + + S D +V++ K V +L++
Sbjct: 363 VDAEKMLREMLSVGLKPDSGTYTIVMNEFCKNGDVNTGSKLLK 405
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 82/173 (47%), Gaps = 1/173 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K + A +++ ++ + ++++N L+ + L ++ K
Sbjct: 247 LIDGHCKNGKLDLAMEIYKQILSQGLSPDLITYNTLIYGFCKKGDLKQTRDLIDEMSMK- 305
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD ++Y T+I +G L++A +M ++ IRLD + + L+ G GR DA
Sbjct: 306 GLKPDKITYTTLIDGSCKEGDLETAFEYRKKMIEENIRLDDVVYTALISGLCKEGRSVDA 365
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
EK+ M+++ ++P+ +Y ++ +L+ EM+ P V T
Sbjct: 366 EKMLREMLSVGLKPDSGTYTIVMNEFCKNGDVNTGSKLLKEMQRDGHVPSVVT 418
>gi|12324355|gb|AAG52147.1|AC022355_8 hypothetical protein; 57683-56685 [Arabidopsis thaliana]
Length = 332
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 107/217 (49%), Gaps = 4/217 (1%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
E+A + +M + + V+ +NA++ LF ++ H GI PD+++Y+
Sbjct: 58 ESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEM-HDKGIFPDVITYSG 116
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
+I +F G A LL +M ++ I D++TF+ L+ G+ ++AE+I+ M+
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
+ P +YN+ +DG + + A ++ M SK +PDV TF LI G+ ++
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236
Query: 289 RWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
+ ++ G N + L+ C+ GDLD A +L
Sbjct: 237 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDL 273
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 111/245 (45%), Gaps = 22/245 (8%)
Query: 123 CEQTVLSFNALL-GACVNSKKFDE---VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGS 178
C V++F L+ G C + VD + ++ G +P Y TII G
Sbjct: 6 CRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEE-----GHQP----YGTIINGLCKMGD 56
Query: 179 LDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNA 238
+SA LL +ME+ I+ ++ +N ++ +G A+ ++ M + + P+V +Y+
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 239 RLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGM 298
+D + A +L+ +M ++INPDV TF ALI V EG + EA+ Y G +
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIY---GDML 173
Query: 299 NKAIFKLLVPF------VCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVE 352
+ IF + + C++ L+ A + S+ C D +++ K RV+
Sbjct: 174 RRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVD 233
Query: 353 EAKEL 357
E+
Sbjct: 234 NGMEI 238
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/244 (20%), Positives = 116/244 (47%), Gaps = 4/244 (1%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I + K+ + + F + D G F + Y+G + + R+ E++L +
Sbjct: 81 AIIDRLCKDGHHIHAQNLFTEMHDKGIF-PDVITYSGMIDSFCRSGRWTDAEQLLRDMIE 139
Query: 86 YKDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
+ I+ + T + LI K A +++ +M R T +++N+++ + +
Sbjct: 140 -RQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLN 198
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
+ + + K PD+V+++T+I + +D+ + EM ++GI + +T+ TL
Sbjct: 199 DAKRMLDSMASK-SCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTL 257
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+ GF G A+ + M++ V PN ++ + L L +K+ +KA ++ +++ E+
Sbjct: 258 IHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQKSEV 317
Query: 265 NPDV 268
P +
Sbjct: 318 CPRI 321
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 75/175 (42%), Gaps = 13/175 (7%)
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
M + G R D++TF TL+ G GR A + + MV +P Y ++GL
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKAIFKLLVP 308
T+ AL L+ +M I V + A+I +G+ A+ + + +K IF ++
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMH---DKGIFPDVIT 113
Query: 309 F------VCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
+ C G A L + + D +++ L KE +V EA+E+
Sbjct: 114 YSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEI 168
>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
Length = 524
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 108/202 (53%), Gaps = 7/202 (3%)
Query: 86 YKDISKEGFTA------RLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
++++S++G A LI ++ + + ++F+ + V+ +NAL+ +
Sbjct: 312 FEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCT 371
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
+ + ++ K I PD ++YNT+++ F G LD A TL+ EM K+GI+ DL+
Sbjct: 372 GGDMERAYEIMAEMEKK-RIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLV 430
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
++NTL+ G+ G DA ++ + M++ P + +YNA + GL +Q A L+ EM
Sbjct: 431 SYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEM 490
Query: 260 RSKEINPDVFTFYALIKGFVNE 281
+K I PD T+ +LI+G E
Sbjct: 491 VAKGITPDDSTYISLIEGLTTE 512
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 133/308 (43%), Gaps = 39/308 (12%)
Query: 54 RTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFT-ARLIALYGKAAMFENAR 112
R N Y + R + E++ ++ I+ + +T A LI+ + K E+A
Sbjct: 144 RPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAV 203
Query: 113 KVFDEMPGRN-CEQTVLSFNALLGACVNSKKFDE-----------------------VDG 148
KVFDEM + + + +NAL+G + K D +
Sbjct: 204 KVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHA 263
Query: 149 LFKDL-----------PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLD 197
LF D K G PD+ +YN +I + +G+ A + EM +KG+R
Sbjct: 264 LFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRAT 323
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
+T+ +L+ F G+ + ++++ V +RP+V YNA ++ ++A E++
Sbjct: 324 AVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMA 383
Query: 258 EMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKG 314
EM K I PD T+ L++GF G L+EA+ + K G + + L+ KG
Sbjct: 384 EMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKG 443
Query: 315 DLDFAFNL 322
D+ A +
Sbjct: 444 DIKDALRV 451
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 102/228 (44%), Gaps = 14/228 (6%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
+I G KE N K+ ++ F++ S G R YT + F ++ E + +
Sbjct: 295 LINGYCKEGNEKKALEVFEEMSQKG-VRATAVTYTSLIYV------FSRKGQVQETDRLF 347
Query: 87 KDISKEGFTA------RLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNS 140
K+G LI + E A ++ EM + +++N L+
Sbjct: 348 NVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLL 407
Query: 141 KKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLIT 200
+ DE L ++ K GI+PDLVSYNT+I + KG + A + EM KG L+T
Sbjct: 408 GRLDEARTLIDEM-TKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMT 466
Query: 201 FNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
+N L+ G + DAE + + MV + P+ +Y + ++GL E +
Sbjct: 467 YNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEGLTTEDE 514
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 119/307 (38%), Gaps = 82/307 (26%)
Query: 129 SFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLY 187
+FN +L C K ++ L + +P P+ V+YNT+I F +G + +A ++
Sbjct: 118 TFNIMLRHLCATGKPVRALE-LLRQMPR-----PNAVTYNTVIAGFCARGRVQAALEVMR 171
Query: 188 EM-EKKGIRLDLITFNTLLLGFYSNGRFADAEKIW------------------------- 221
EM E+ GI D T+ TL+ G+ GR DA K++
Sbjct: 172 EMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCD 231
Query: 222 -----------ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
E MV + V +YN + L ++ + A ++ EM+ +PDVFT
Sbjct: 232 VGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFT 291
Query: 271 FYALIKGFVNEGN-----------------------------------LEEAKRWYN--- 292
+ LI G+ EGN ++E R +N
Sbjct: 292 YNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAV 351
Query: 293 KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVE 352
K G + ++ L+ C GD++ A+ + +R D ++ R++
Sbjct: 352 KKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLD 411
Query: 353 EAKELVE 359
EA+ L++
Sbjct: 412 EARTLID 418
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 140/330 (42%), Gaps = 40/330 (12%)
Query: 25 GSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQK 84
+VI G + L+R++ K + + + N Y G + L + E +L
Sbjct: 292 STVINGYCQVGELQRVL-KLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMI 350
Query: 85 QYKDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKF 143
+ I+ +G LI + K +A ++FDEM R +++ A++ + +
Sbjct: 351 S-EGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRV 409
Query: 144 DEVDGLFKDLPHK----------------------------------LGIEPDLVSYNTI 169
E D LF ++ K +G+ P++V+Y +
Sbjct: 410 MEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTAL 469
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
G +D+AN LL+EM +KG+ L++ T+N+L+ G G A K+ + M
Sbjct: 470 ADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGF 529
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK- 288
P+ +Y +D ++ +A EL+ +M +E+ P V TF L+ GF G LE+ +
Sbjct: 530 HPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEK 589
Query: 289 --RWYNKSGCGMNKAIFKLLVPFVCEKGDL 316
+W + G N + L+ C + ++
Sbjct: 590 LLKWMLEKGIMPNATTYNSLIKQYCIRNNM 619
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 121/266 (45%), Gaps = 9/266 (3%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A KVF E P S+N + + + E L + + G PD++SY+T+I
Sbjct: 237 ALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELR-GCIPDVISYSTVI 295
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
+ G L L+ EM+ KG++ + T+N ++L G+ A+AE++ M++ +
Sbjct: 296 NGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIA 355
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
P+ Y +DG A L EM+ ++I+PD T+ A+I G G + EA +
Sbjct: 356 PDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKL 415
Query: 291 YNKSGCGM---NKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAK 347
+++ C ++ + L+ C++G + AF+L + + + D L K
Sbjct: 416 FHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCK 475
Query: 348 ELRVEEAKELVELGKTNSYCRYNLKF 373
V+ A EL+ + CR L+
Sbjct: 476 CGEVDTANELL-----HEMCRKGLEL 496
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 112/268 (41%), Gaps = 40/268 (14%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K + A ++ EM + E + ++N+L+ + D+ L KD+ G PD
Sbjct: 475 KCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDM-EVAGFHPDA 533
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
V+Y T++ A+ + A+ LL +M + ++ ++TFN L+ GF +G D EK+ +
Sbjct: 534 VTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKW 593
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPD---------------- 267
M+ + PN +YN+ + I + E+ M +K + PD
Sbjct: 594 MLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARN 653
Query: 268 -------------------VFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKL 305
V ++ ALIKGF EA+ + + G ++ I+ +
Sbjct: 654 MKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNI 713
Query: 306 LVPFVCEKGDLDFAFNLCKRTFSERCLV 333
++G ++ LC E+CLV
Sbjct: 714 FADINYDEGKMELTLELCDEAI-EKCLV 740
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 109/263 (41%), Gaps = 50/263 (19%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGL------FKDLPHKL 157
+A M + ARK+FD+M +V S N + S +++DG+ F + P ++
Sbjct: 194 EAGMLDEARKLFDKMLNYGLLISVDSCNLFI-----SHLSEDLDGIKIALKVFVEFP-EV 247
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ + SYN I + G + A+ LL +ME +G
Sbjct: 248 GVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRG------------------------ 283
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
P+V SY+ ++G + ++ L+L+ EM+ K + P+ +T+ +I
Sbjct: 284 -----------CIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILL 332
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
G + EA+R + G + I+ L+ C+ G++ A+ L + D
Sbjct: 333 LCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPD 392
Query: 335 QAPLQLVVDRLAKELRVEEAKEL 357
V+ L + RV EA +L
Sbjct: 393 FITYTAVICGLCQTGRVMEADKL 415
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 105/246 (42%), Gaps = 4/246 (1%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
S++ G+ K N+ + V K K ++ F + YT + ++ E+L Q
Sbjct: 503 SLVNGLCKAGNIDQAV-KLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLR-QML 560
Query: 86 YKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
+++ T L+ + + M E+ K+ M + ++N+L+
Sbjct: 561 DRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMR 620
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
+++ + K G+ PD +YN +IK ++ A L +M KG L + ++N L
Sbjct: 621 ATTEIYRGMCAK-GVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNAL 679
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+ GFY +F +A +++E M + + YN D E + + LEL E K +
Sbjct: 680 IKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCL 739
Query: 265 NPDVFT 270
D+ T
Sbjct: 740 VGDIQT 745
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 138/305 (45%), Gaps = 14/305 (4%)
Query: 74 RWIEEILEHQKQYKDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNA 132
+W +E+L K IS + T LI +G+ + +F EM R + +++
Sbjct: 384 KWFDEMLS-----KKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTT 438
Query: 133 LLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKK 192
L+ + + L ++ ++G+ P++V+Y +I G LD+AN LL EM KK
Sbjct: 439 LIDVYCKAGEMVNAFSLHNEMV-QMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKK 497
Query: 193 GIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKA 252
G++L++ +N+++ G G A K+ + M + P+ +Y +D KA
Sbjct: 498 GLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKA 557
Query: 253 LELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR---WYNKSGCGMNKAIFKLLVPF 309
+L+ EM + + P V TF L+ GF G LE+ R W + G + + L+
Sbjct: 558 HKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQ 617
Query: 310 VCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA----KELVELGKTNS 365
C + ++ + KR ++ D +++ K ++EA KE++E G +
Sbjct: 618 HCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPT 677
Query: 366 YCRYN 370
YN
Sbjct: 678 VTSYN 682
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 129/295 (43%), Gaps = 48/295 (16%)
Query: 86 YKDISKEGFTARLIALYG-------KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACV 138
+ ++ + G T ++ YG K + A ++ DEM + + V +N+++
Sbjct: 456 HNEMVQMGMTPNIVT-YGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGIC 514
Query: 139 NSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL 198
+ ++ L K++ GI+PD ++Y T+I A+ G +D A+ LL EM +G++ +
Sbjct: 515 KAGNIEQAIKLMKEM-EVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTV 573
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
+TFN L+ GF G D +++ M+ + P+ +YN + I ++
Sbjct: 574 VTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKR 633
Query: 259 MRSKEINPDVFTFYALIKGFVNEGNLEEA-----------------------KRWYNK-- 293
MR++ + PD T+ LIKG NL+EA KR+Y K
Sbjct: 634 MRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRK 693
Query: 294 -------------SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQ 335
G + I+ V E+GD++ NLC E+CL+++
Sbjct: 694 FXEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAI-EKCLLNE 747
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 104/228 (45%), Gaps = 4/228 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I L K A KV EM + + + L+ + F ++ K
Sbjct: 334 IILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSK- 392
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
I PD ++Y T+I+ F G + L +EM +G++ D +T+ TL+ + G +A
Sbjct: 393 KISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNA 452
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ MV M + PN+ +Y A +DGL + A EL+ EMR K + +V + +++ G
Sbjct: 453 FSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNG 512
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
GN+E+A + + +G + + ++ C GD+D A L
Sbjct: 513 ICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKL 560
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 121/255 (47%), Gaps = 7/255 (2%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
E A KVF E G + T S+N ++ + K E L + + PD+VSY+
Sbjct: 242 IEMAIKVFCEY-GISWNTT--SYNIIIYSLCRLGKVKEAHRLLMQMDFR-SSTPDVVSYS 297
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
T+I + G L A L+ +M+ KG++ + T+N+++L G+ +AEK+ M++
Sbjct: 298 TVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQ 357
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+ P+ Y + G + A + EM SK+I+PD T+ LI+GF G + E
Sbjct: 358 KIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEP 417
Query: 288 KRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDR 344
+ +++ G ++ + L+ C+ G++ AF+L + ++D
Sbjct: 418 QNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDG 477
Query: 345 LAKELRVEEAKELVE 359
L K ++ A EL++
Sbjct: 478 LCKHGELDTANELLD 492
>gi|168055632|ref|XP_001779828.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668740|gb|EDQ55341.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 730
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 144/312 (46%), Gaps = 7/312 (2%)
Query: 70 AKRFRWIEEILE--HQKQYKDISKEGFTARL-IALYGKAAMFENARKVFDEMPGRNCEQT 126
K+ R E ILE + + + I + +T I ++ E A ++F +M NC
Sbjct: 163 GKKGRSWENILELFEEMKAQGIQPDEYTYNTAITACASGSLCEEATELFTQMKSSNCTPD 222
Query: 127 VLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLL 186
+++NALL + ++E + K++ G P++V+YN ++ AF G ++A +
Sbjct: 223 RVTYNALLDVYGKAGWYNEAANVLKEM-ESAGCLPNIVTYNELLSAFGRAGLCNAAAEMK 281
Query: 187 YEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIE 246
M KGI D+ T+ +LL + G+ A +I+ M N PN ++NA +
Sbjct: 282 DSMVSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKN 341
Query: 247 KQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK---RWYNKSGCGMNKAIF 303
K + + + +M++ + PD+ T+ +L+ F G E R K+G +KA F
Sbjct: 342 KNFSEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATF 401
Query: 304 KLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKT 363
+L+ G D A ++ C D A ++ LA+E R E A+ +++
Sbjct: 402 NILIEAYGRCGSSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELILDELNR 461
Query: 364 NSYCRYNLKFPS 375
+SY ++ + S
Sbjct: 462 SSYKPNDIAYAS 473
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 109/225 (48%), Gaps = 10/225 (4%)
Query: 87 KDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
K I + FT L++ Y +A E A +++++M NC +FNAL+G +K F E
Sbjct: 287 KGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSE 346
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
+ +F+D+ G+EPD+V++N+++ AF G + M+K G D TFN L+
Sbjct: 347 MMVIFEDM-QACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILI 405
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEIN 265
+ G A I++ M+ P++ ++N L LA E + + A ++ E+
Sbjct: 406 EAYGRCGSSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELILDELNRSSYK 465
Query: 266 PDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKAIFKLLVPFV 310
P+ + +++ + N G LE+ K M + + VPF
Sbjct: 466 PNDIAYASMLHAYANGGELEKLKE--------MVDTLHTIYVPFT 502
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 132/292 (45%), Gaps = 17/292 (5%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
S+++G+ +E + ++ F FR + G+ + R+ + ++ +
Sbjct: 51 SIMKGLGREGQWNKALEVFNWMRQSVNFRPD-GVTIAVMLRILGRE-----SQLTTVSRL 104
Query: 86 YKDISKEGFT------ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGA-CV 138
+K + +EG+ LI+ + F+ A F++M + +++++N ++
Sbjct: 105 FKSLREEGYPLDVYAYTSLISALSRNRKFKEALGFFEQMKEAGPQPSLVTYNVIIDLYGK 164
Query: 139 NSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL 198
+ ++ + LF+++ + GI+PD +YNT I A + A L +M+ D
Sbjct: 165 KGRSWENILELFEEMKAQ-GIQPDEYTYNTAITACASGSLCEEATELFTQMKSSNCTPDR 223
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
+T+N LL + G + +A + + M + PN+ +YN L A E+
Sbjct: 224 VTYNALLDVYGKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDS 283
Query: 259 MRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLV 307
M SK I PDVFT+ +L+ + G +E+A YN+ S C N F L+
Sbjct: 284 MVSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALI 335
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 142/321 (44%), Gaps = 14/321 (4%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFT-ARLIALYGKAAMFENARKVFDEM 118
YT + + A + EI +Q + + + FT LI ++GK F +F++M
Sbjct: 296 YTSLLSAYSRAGKVEQAMEIY-NQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVIFEDM 354
Query: 119 PGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGS 178
E ++++N+LLGA + + EV +F+ + K G EPD ++N +I+A+ GS
Sbjct: 355 QACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGM-KKAGFEPDKATFNILIEAYGRCGS 413
Query: 179 LDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNA 238
D A ++ M + G DL TFNTLL GR+ AE I + + + +PN +Y +
Sbjct: 414 SDQALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELILDELNRSSYKPNDIAYAS 473
Query: 239 RLDGLAIEKQTKKALELVGEMRS-----KEINPDVFTFYALIKGFVNEGNLEEAKRWYNK 293
L A + +K E+V + + +I F V+E E+A
Sbjct: 474 MLHAYANGGELEKLKEMVDTLHTIYVPFTKILLKTFVLVYSKCSLVDEA--EDAFLAMRH 531
Query: 294 SGCGMNKAIFKLLVPFVCEKGDLDFA---FNLCKRTFSERCLVDQAPLQLVVDRLAKELR 350
G + + F ++ +KG +D A F L + T E +V L + R +
Sbjct: 532 HGYLSDTSTFNAMISMYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGMYGREGMYRK 591
Query: 351 VEEA-KELVELGKTNSYCRYN 370
E +E + G+T YN
Sbjct: 592 CEATLRECMAAGQTPDLVSYN 612
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 107/274 (39%), Gaps = 11/274 (4%)
Query: 47 SSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAA 106
+ DL F T + LA R+ E IL+ + + A ++ Y
Sbjct: 430 TPDLATFNT-------LLAALAREGRWEHAELILDELNRSSYKPNDIAYASMLHAYANGG 482
Query: 107 MFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSY 166
E +++ D + T + + DE + F + H G D ++
Sbjct: 483 ELEKLKEMVDTLHTIYVPFTKILLKTFVLVYSKCSLVDEAEDAFLAMRHH-GYLSDTSTF 541
Query: 167 NTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVN 226
N +I + KG +D A + G+ D++T+N L+ + G + E +
Sbjct: 542 NAMISMYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGMYGREGMYRKCEATLRECMA 601
Query: 227 MNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEE 286
P++ SYN + + Q A + EM S I PD FT+ + +VN G E
Sbjct: 602 AGQTPDLVSYNTVIFSYSKHGQLSSATRIFHEMVSNGIQPDSFTYNTFVGCYVNGGMFPE 661
Query: 287 A---KRWYNKSGCGMNKAIFKLLVPFVCEKGDLD 317
A + +K+GC ++ ++ LV C+ G +
Sbjct: 662 ALSVVKHMHKTGCKPDEVTYRTLVDAYCKIGKFE 695
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 59/123 (47%), Gaps = 1/123 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+ +YG+ M+ E ++S+N ++ + + +F ++
Sbjct: 579 LMGMYGREGMYRKCEATLRECMAAGQTPDLVSYNTVIFSYSKHGQLSSATRIFHEMVSN- 637
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
GI+PD +YNT + +V+ G A +++ M K G + D +T+ TL+ + G+F +
Sbjct: 638 GIQPDSFTYNTFVGCYVNGGMFPEALSVVKHMHKTGCKPDEVTYRTLVDAYCKIGKFEEV 697
Query: 218 EKI 220
E+I
Sbjct: 698 ERI 700
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I Y K +A ++F EM + ++N +G VN F E + K + HK
Sbjct: 614 VIFSYSKHGQLSSATRIFHEMVSNGIQPDSFTYNTFVGCYVNGGMFPEALSVVKHM-HKT 672
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLL 186
G +PD V+Y T++ A+ G + +L
Sbjct: 673 GCKPDEVTYRTLVDAYCKIGKFEEVERIL 701
>gi|242061532|ref|XP_002452055.1| hypothetical protein SORBIDRAFT_04g017800 [Sorghum bicolor]
gi|241931886|gb|EES05031.1| hypothetical protein SORBIDRAFT_04g017800 [Sorghum bicolor]
Length = 810
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 156/336 (46%), Gaps = 14/336 (4%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
S+I G + ++ ++ FK S + N Y ++ L A+++ +++ +
Sbjct: 482 SLINGFSENGSVDDALELFKNMS----CKRNVVTYNYMLKGLCRAEQWEDAGKLVAEMVK 537
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
+ + E + LI+ + E A +VF++MP NC V+ ++ L+ + + D+
Sbjct: 538 DECLPNEVTFSTLISYLCQKGFVECAIEVFEKMPKYNCMPNVIIYSTLINGLSDQECVDD 597
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
L D+P K PD + Y+ +K + A L+ EM +K D +TF+ L+
Sbjct: 598 ALKLLNDMPCK----PDTICYSAALKGLCRAERWEDAGELILEMIRKNCLPDEVTFSILI 653
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEIN 265
G A ++ E M+ PNV Y++ ++G A + + + AL+L +R+
Sbjct: 654 NNLCHKGFLESATEVSELMLKYECMPNVFIYSSLINGFAEQYRAEDALQL---LRNMPCE 710
Query: 266 PDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
PD + A +KG E+A+ + C +++A F +L+ +C+ G +D A +
Sbjct: 711 PDTICYSAALKGLCRAKRWEDARELIAEMFRKQCPLDEATFSMLIGSLCQNGLVDMATEV 770
Query: 323 CKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
++ C ++ +V+ +++ RV+E +L+
Sbjct: 771 FEQMSVYGCSPNRKIHSSLVNGYSEQRRVDEGLKLL 806
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 78/355 (21%), Positives = 156/355 (43%), Gaps = 30/355 (8%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
+++ G +E RL D + +D+ F N+ + ++ L + K + EE+L +
Sbjct: 176 TLVAGYCREG---RLNDARRLVADMP-FAPNSYTNSTLLKGLCSNKEWDDAEELLSEMIR 231
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
+ +I + + + A V D+M C + V+ +N ++ + +E
Sbjct: 232 SGCPPNDLTFGMIIHSLCQNGLADRAMGVLDQMSKCRCTRGVIVYNEIISCLAELGRVEE 291
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
LF +P K PD+ SYNT++K G + A TL+ M +K D +TFNT++
Sbjct: 292 ALHLFDQMPCK----PDIFSYNTVMKGLCRDGRWEDAGTLIAGMVRKDCPPDEVTFNTVI 347
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEIN 265
G A ++ E M +P+ +Y+A ++ L+ ALEL +R+
Sbjct: 348 SYLCHRGLVDCAMEVVEQMPKYGCKPDNFTYSALVNALSERGCVDDALEL---LRTIPWK 404
Query: 266 PDVFTFYALIKGFVNEGNLEEAKRWYN---------KSGCGMNKAIFKLLVPFVCEKGDL 316
P+ + +++KG A RW + ++ +++ F L++ +C+KG +
Sbjct: 405 PNTVCYRSVLKGLC------RADRWDDVGKLVAEMIRNQLNLDEVTFGLIIDCLCQKGLV 458
Query: 317 DFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKTNSYCRYNL 371
D+ + + C D +++ ++ V++A EL + N C+ N+
Sbjct: 459 DYGAEVLREMTKFGCSPDIIIYNSLINGFSENGSVDDALELFK----NMSCKRNV 509
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 120/297 (40%), Gaps = 42/297 (14%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I+ + E A +FD+MP C+ + S+N ++ ++++ L + K
Sbjct: 279 IISCLAELGRVEEALHLFDQMP---CKPDIFSYNTVMKGLCRDGRWEDAGTLIAGMVRK- 334
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
PD V++NT+I +G +D A ++ +M K G + D T++ L+ G DA
Sbjct: 335 DCPPDEVTFNTVISYLCHRGLVDCAMEVVEQMPKYGCKPDNFTYSALVNALSERGCVDDA 394
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEIN------------ 265
++ T+ +PN Y + L GL + +LV EM ++N
Sbjct: 395 LELLRTI---PWKPNTVCYRSVLKGLCRADRWDDVGKLVAEMIRNQLNLDEVTFGLIIDC 451
Query: 266 -----------------------PDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKAI 302
PD+ + +LI GF G++++A + C N
Sbjct: 452 LCQKGLVDYGAEVLREMTKFGCSPDIIIYNSLINGFSENGSVDDALELFKNMSCKRNVVT 511
Query: 303 FKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ ++ +C + A L + CL ++ ++ L ++ VE A E+ E
Sbjct: 512 YNYMLKGLCRAEQWEDAGKLVAEMVKDECLPNEVTFSTLISYLCQKGFVECAIEVFE 568
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 116/256 (45%), Gaps = 4/256 (1%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
+A +E+A K+ EM C ++F+ L+ + +F+ +P K P++
Sbjct: 521 RAEQWEDAGKLVAEMVKDECLPNEVTFSTLISYLCQKGFVECAIEVFEKMP-KYNCMPNV 579
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
+ Y+T+I D+ +D A LL +M K D I ++ L G R+ DA ++
Sbjct: 580 IIYSTLINGLSDQECVDDALKLLNDMPCKP---DTICYSAALKGLCRAERWEDAGELILE 636
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M+ N P+ +++ ++ L + + A E+ M E P+VF + +LI GF +
Sbjct: 637 MIRKNCLPDEVTFSILINNLCHKGFLESATEVSELMLKYECMPNVFIYSSLINGFAEQYR 696
Query: 284 LEEAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVD 343
E+A + C + + + +C + A L F ++C +D+A +++
Sbjct: 697 AEDALQLLRNMPCEPDTICYSAALKGLCRAKRWEDARELIAEMFRKQCPLDEATFSMLIG 756
Query: 344 RLAKELRVEEAKELVE 359
L + V+ A E+ E
Sbjct: 757 SLCQNGLVDMATEVFE 772
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 95/205 (46%), Gaps = 3/205 (1%)
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
K G PD++ YN++I F + GS+D A L M K +++T+N +L G ++
Sbjct: 470 KFGCSPDIIIYNSLINGFSENGSVDDALELFKNMSCKR---NVVTYNYMLKGLCRAEQWE 526
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
DA K+ MV PN +++ + L + + A+E+ +M P+V + LI
Sbjct: 527 DAGKLVAEMVKDECLPNEVTFSTLISYLCQKGFVECAIEVFEKMPKYNCMPNVIIYSTLI 586
Query: 276 KGFVNEGNLEEAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQ 335
G ++ +++A + N C + + + +C + A L + CL D+
Sbjct: 587 NGLSDQECVDDALKLLNDMPCKPDTICYSAALKGLCRAERWEDAGELILEMIRKNCLPDE 646
Query: 336 APLQLVVDRLAKELRVEEAKELVEL 360
++++ L + +E A E+ EL
Sbjct: 647 VTFSILINNLCHKGFLESATEVSEL 671
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 123/310 (39%), Gaps = 48/310 (15%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI A ++A +V V + G C + + + + L L
Sbjct: 108 LIKKLCAAGRLDDAERVLGASERAGTADAVTRNTLVAGYCRAGGRLADAERMLASL--AL 165
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
D+V+YNT++ + +G L+ A L+ +M + T +TLL G SN + DA
Sbjct: 166 SGSADVVTYNTLVAGYCREGRLNDARRLVADMP---FAPNSYTNSTLLKGLCSNKEWDDA 222
Query: 218 EKIWETMVNMNVRPN-----------------------------------VRSYNARLDG 242
E++ M+ PN V YN +
Sbjct: 223 EELLSEMIRSGCPPNDLTFGMIIHSLCQNGLADRAMGVLDQMSKCRCTRGVIVYNEIISC 282
Query: 243 LAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMN 299
LA + ++AL L +M K PD+F++ ++KG +G E+A + C +
Sbjct: 283 LAELGRVEEALHLFDQMPCK---PDIFSYNTVMKGLCRDGRWEDAGTLIAGMVRKDCPPD 339
Query: 300 KAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ F ++ ++C +G +D A + ++ C D +V+ L++ V++A EL+
Sbjct: 340 EVTFNTVISYLCHRGLVDCAMEVVEQMPKYGCKPDNFTYSALVNALSERGCVDDALELLR 399
Query: 360 L--GKTNSYC 367
K N+ C
Sbjct: 400 TIPWKPNTVC 409
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 98/218 (44%), Gaps = 5/218 (2%)
Query: 42 DKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIAL 101
D K +D+ + +T Y+ ++ L A+R+ E++ + + E + LI
Sbjct: 597 DALKLLNDMP-CKPDTICYSAALKGLCRAERWEDAGELILEMIRKNCLPDEVTFSILINN 655
Query: 102 YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEP 161
E+A +V + M C V +++L+ + ++ L +++P EP
Sbjct: 656 LCHKGFLESATEVSELMLKYECMPNVFIYSSLINGFAEQYRAEDALQLLRNMP----CEP 711
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
D + Y+ +K + A L+ EM +K LD TF+ L+ NG A +++
Sbjct: 712 DTICYSAALKGLCRAKRWEDARELIAEMFRKQCPLDEATFSMLIGSLCQNGLVDMATEVF 771
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
E M PN + +++ ++G + +++ + L+L+ M
Sbjct: 772 EQMSVYGCSPNRKIHSSLVNGYSEQRRVDEGLKLLSSM 809
>gi|410109941|gb|AFV61050.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rhodocnemis]
Length = 428
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 141/299 (47%), Gaps = 14/299 (4%)
Query: 86 YKDISKEGFTARL------IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
Y++I + G+ A L + + K A+ VFD + +V+S+N L+ +
Sbjct: 127 YEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIR 186
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
DE L K G+ PD+ +Y+ +I + +D AN L EM KG+ + +
Sbjct: 187 LGHLDEGFRL-KSAMLASGVLPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGV 245
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
TF TL+ G NGR A +I++ M++ ++ P++ +YN + GL + K+A +L+ EM
Sbjct: 246 TFTTLIDGHCKNGRVDFAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEM 305
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLE---EAKRWYNKSGCGMNKAIFKLLVPFVCEKGDL 316
K + PD FT+ LI G EG+L+ E ++ + ++ + L+ +C++G
Sbjct: 306 SMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYAALISGLCQEGRS 365
Query: 317 DFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA----KELVELGKTNSYCRYNL 371
A + + S D ++++ K+ V + KE+ G S YN+
Sbjct: 366 VDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNV 424
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 86/180 (47%), Gaps = 1/180 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K + A +++ M ++ ++++N L+ + L ++ K
Sbjct: 250 LIDGHCKNGRVDFAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMK- 308
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD +Y T+I +G LD+A M ++ IRLD + + L+ G GR DA
Sbjct: 309 GLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYAALISGLCQEGRSVDA 368
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
EK+ M+++ ++P+ +Y ++ + K +L+ EM+ P V T+ L+ G
Sbjct: 369 EKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMNG 428
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 138/305 (45%), Gaps = 14/305 (4%)
Query: 74 RWIEEILEHQKQYKDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNA 132
+W +E+L K IS + T LI +G+ + +F EM R + +++
Sbjct: 384 KWFDEMLS-----KKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTT 438
Query: 133 LLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKK 192
L+ + + L ++ ++G+ P++V+Y +I G LD+AN LL EM KK
Sbjct: 439 LIDVYCKAGEMVNAFSLHNEMV-QMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKK 497
Query: 193 GIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKA 252
G++L++ +N+++ G G A K+ + M + P+ +Y +D KA
Sbjct: 498 GLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKA 557
Query: 253 LELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR---WYNKSGCGMNKAIFKLLVPF 309
+L+ EM + + P V TF L+ GF G LE+ R W + G + + L+
Sbjct: 558 HKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQ 617
Query: 310 VCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA----KELVELGKTNS 365
C + ++ + KR ++ D +++ K ++EA KE++E G +
Sbjct: 618 HCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPT 677
Query: 366 YCRYN 370
YN
Sbjct: 678 VTSYN 682
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 112/235 (47%), Gaps = 5/235 (2%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
KA E A K+ EM + +++ ++ A D+ L +++ + G++P +
Sbjct: 515 KAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDR-GLQPTV 573
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
V++N ++ F G L+ + LL M +KGI D IT+NTL+ KI++
Sbjct: 574 VTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKR 633
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M N V P+ +YN + G + K+A L EM K P V ++ ALIK F +
Sbjct: 634 MRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKK 693
Query: 284 LEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQ 335
+ EA+ + + G + I+ V E+GD++ NLC E+CL+++
Sbjct: 694 ILEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAI-EKCLLNE 747
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 104/228 (45%), Gaps = 4/228 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I L K A KV EM + + + L+ + F ++ K
Sbjct: 334 IILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSK- 392
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
I PD ++Y T+I+ F G + L +EM +G++ D +T+ TL+ + G +A
Sbjct: 393 KISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNA 452
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ MV M + PN+ +Y A +DGL + A EL+ EMR K + +V + +++ G
Sbjct: 453 FSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNG 512
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
GN+E+A + + +G + + ++ C GD+D A L
Sbjct: 513 ICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKL 560
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 121/255 (47%), Gaps = 7/255 (2%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
E A KVF E G + T S+N ++ + K E L + + PD+VSY+
Sbjct: 242 IEMAIKVFCEY-GISWNTT--SYNIIIYSLCRLGKVKEAHRLLMQMDFR-SSTPDVVSYS 297
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
T+I + G L A L+ +M+ KG++ + T+N+++L G+ +AEK+ M++
Sbjct: 298 TVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQ 357
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+ P+ Y + G + A + EM SK+I+PD T+ LI+GF G + E
Sbjct: 358 KIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEP 417
Query: 288 KRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDR 344
+ +++ G ++ + L+ C+ G++ AF+L + ++D
Sbjct: 418 QNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDG 477
Query: 345 LAKELRVEEAKELVE 359
L K ++ A EL++
Sbjct: 478 LCKHGELDTANELLD 492
>gi|242076206|ref|XP_002448039.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
gi|241939222|gb|EES12367.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
Length = 481
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 132/310 (42%), Gaps = 39/310 (12%)
Query: 54 RTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFT-ARLIALYGKAAMFENAR 112
R N Y + R + E++ ++ I+ + +T A LI+ + K E+A
Sbjct: 144 RPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAA 203
Query: 113 KVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKA 172
KVFDEM + + P V YN +I
Sbjct: 204 KVFDEMLTQG-----------------------------------EVAPSAVMYNALIGG 228
Query: 173 FVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPN 232
+ D+G LD A +M ++G+ + + T+N L+ + +GR +DA + E M + P+
Sbjct: 229 YCDRGKLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPD 288
Query: 233 VRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN 292
V +YN ++G E KKALE+ EM K + T+ +LI F +G ++E R +
Sbjct: 289 VFTYNILINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFK 348
Query: 293 ---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKEL 349
K G + ++ L+ C GD++ AF + +R D ++
Sbjct: 349 VAVKKGIRPDVVMYNALINSHCAGGDMERAFEIMAEMEKKRIPPDDVTYNTLIRGFCLLG 408
Query: 350 RVEEAKELVE 359
R++EA+ L++
Sbjct: 409 RLDEARGLID 418
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 103/203 (50%), Gaps = 11/203 (5%)
Query: 79 ILEHQKQYKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGAC 137
+LE + Q +S + FT LI Y K + A +VF+EM + T +++ +L+ A
Sbjct: 276 VLE-EMQRNGLSPDVFTYNILINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAF 334
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLD 197
+ E D LFK + K GI PD+V YN +I + G ++ A ++ EMEKK I D
Sbjct: 335 SRKGQVQETDRLFK-VAVKKGIRPDVVMYNALINSHCAGGDMERAFEIMAEMEKKRIPPD 393
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
+T+NTL+ GF GR +A + + M ++P++ GL Q A L+
Sbjct: 394 DVTYNTLIRGFCLLGRLDEARGLIDEMTKRGIQPDL--------GLCKNGQGDDAENLMK 445
Query: 258 EMRSKEINPDVFTFYALIKGFVN 280
EM K I PD T+ +LI+G
Sbjct: 446 EMVGKGITPDDSTYISLIEGLTT 468
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 44/197 (22%)
Query: 129 SFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLY 187
+FN +L C K ++ L + +P P+ V+YNT+I F +G + +A ++
Sbjct: 118 TFNIMLRHLCATGKPVRALE-LLRQMPR-----PNAVTYNTVIAGFCARGRVQAALEVMR 171
Query: 188 EM-EKKGIRLDLITFNTLLLGFYSNGRFADAEKIW------------------------- 221
EM E+ GI D T+ TL+ G+ GR DA K++
Sbjct: 172 EMRERGGIAPDKYTYATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCD 231
Query: 222 -----------ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
E MV V V +YN + L ++ + A ++ EM+ ++PDVFT
Sbjct: 232 RGKLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFT 291
Query: 271 FYALIKGFVNEGNLEEA 287
+ LI G+ EGN ++A
Sbjct: 292 YNILINGYCKEGNEKKA 308
>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
Length = 650
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 118/252 (46%), Gaps = 4/252 (1%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A + M C+ ++ +L S L + + H+ I+P +V+Y II
Sbjct: 214 AVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHR-KIKPHVVTYTIII 272
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
G LD A + EME KGI+ ++ T+N+L+ F S GR+ D ++ M+ +
Sbjct: 273 DNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKIT 332
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
PNV +++A +D L E + +A +L EM ++ I P+ T+ +LI G N+ L+EA +
Sbjct: 333 PNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQM 392
Query: 291 YN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAK 347
+ GC + + +L+ C+ +D L ++ + D ++ +
Sbjct: 393 MDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQ 452
Query: 348 ELRVEEAKELVE 359
++ AK++ +
Sbjct: 453 SRKLIVAKKVFQ 464
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 129/257 (50%), Gaps = 4/257 (1%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K ++A F EM + + V ++N+L+G+ + ++D+ L +D+ + I P++
Sbjct: 277 KDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITR-KITPNV 335
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
V+++ +I + V +G L A L EM +GI + IT+N+L+ G ++ R +A ++ +
Sbjct: 336 VTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDL 395
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
MV+ P++ +YN ++G KQ + L +M + + D T+ LI+GF
Sbjct: 396 MVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRK 455
Query: 284 LEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL 340
L AK+ + + G + +L+ +C+ G+L+ A + + + +D +
Sbjct: 456 LIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNI 515
Query: 341 VVDRLAKELRVEEAKEL 357
++ + +V++A L
Sbjct: 516 IIHGMCNANKVDDAWSL 532
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 105/194 (54%), Gaps = 2/194 (1%)
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
F+A + +L + + E A+ +++EM R E +++N+L+ N K+ DE + + DL
Sbjct: 338 FSALIDSLVKEGKLTE-AKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMM-DL 395
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
G +PD+ +YN +I F +D L +M +G+ D +T++TL+ GF + +
Sbjct: 396 MVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRK 455
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
A+K+++ MV+ V P + +Y LDGL + ++AL ++ +M ++ D+ +
Sbjct: 456 LIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNI 515
Query: 274 LIKGFVNEGNLEEA 287
+I G N +++A
Sbjct: 516 IIHGMCNANKVDDA 529
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 124/287 (43%), Gaps = 39/287 (13%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
++A +F M TV+ FN L G +K++D V L K + K GI DL + N
Sbjct: 72 DDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELK-GIAYDLYTLNI 130
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
+I F + L A + + ++ K G + +TFNTLL G GR +A ++ + MV
Sbjct: 131 MINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQ 190
Query: 229 VRPNVRSYNARLDGLAIEKQ-----------------------------------TKKAL 253
P++ + N ++GL ++ + T AL
Sbjct: 191 HVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASAL 250
Query: 254 ELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFV 310
+L+ +M ++I P V T+ +I +G L++A ++++ G N + L+
Sbjct: 251 DLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSF 310
Query: 311 CEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
C G D L + + + + ++D L KE ++ EAK+L
Sbjct: 311 CSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDL 357
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 135/304 (44%), Gaps = 18/304 (5%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I + KE L D + + G NT Y + L N KR ++++
Sbjct: 340 ALIDSLVKEGKLTEAKDLYNEMITRG-IEPNTITYNSLIYGLCNDKRLDEANQMMDLMVS 398
Query: 86 YKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
K + +T LI + KA ++ ++F +M R ++++ L+ S+K
Sbjct: 399 -KGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLI 457
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
+F+++ + G+ P +++Y ++ D G L+ A +L +M K + LD+ +N +
Sbjct: 458 VAKKVFQEMVSQ-GVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNII 516
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+ G + + DA ++ ++ + V+ +++SYN L GL +A L +M+
Sbjct: 517 IHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGY 576
Query: 265 NPDVFTFYALIKGFVNEGN--------LEEAKRWYNKSGCGMNKAIFKLLVPFVCEKGDL 316
PD T+ LI+ + GN +EE KR S K + +L G+L
Sbjct: 577 EPDGCTYNTLIRAHL-RGNDITTSVQLIEEMKRCGFSSDASTVKIVMDML-----SSGEL 630
Query: 317 DFAF 320
D +F
Sbjct: 631 DKSF 634
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 113/273 (41%), Gaps = 41/273 (15%)
Query: 124 EQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDK------ 176
E ++FN LL G C+ + F+ V+ D PDL++ NTI+ K
Sbjct: 157 EPNTVTFNTLLNGLCLEGRVFEAVE--LVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEA 214
Query: 177 -----------------------------GSLDSANTLLYEMEKKGIRLDLITFNTLLLG 207
G+ SA LL +ME + I+ ++T+ ++
Sbjct: 215 VDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDN 274
Query: 208 FYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPD 267
+GR DA + M ++ NV +YN+ + + +L+ +M +++I P+
Sbjct: 275 LCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPN 334
Query: 268 VFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCK 324
V TF ALI V EG L EAK YN+ G N + L+ +C LD A +
Sbjct: 335 VVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMD 394
Query: 325 RTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
S+ C D ++++ K +V++ L
Sbjct: 395 LMVSKGCDPDIWTYNILINGFCKAKQVDDGMRL 427
>gi|15225031|ref|NP_178657.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|42570711|ref|NP_973429.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216767|sp|Q9ZUE9.1|PP149_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g06000
gi|4006835|gb|AAC95177.1| hypothetical protein [Arabidopsis thaliana]
gi|110736272|dbj|BAF00106.1| hypothetical protein [Arabidopsis thaliana]
gi|330250896|gb|AEC05990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330250897|gb|AEC05991.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 536
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 131/298 (43%), Gaps = 41/298 (13%)
Query: 103 GKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPD 162
GKA E A ++ M G CE ++++N L+ S + ++ +FKD+ PD
Sbjct: 220 GKA---EKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPD 276
Query: 163 LVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI-- 220
+V+Y ++I + G + A++LL +M + GI +TFN L+ G+ G AE+I
Sbjct: 277 VVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRG 336
Query: 221 ---------------------------------WETMVNMNVRPNVRSYNARLDGLAIEK 247
WE M + PN +Y+ ++ L E
Sbjct: 337 KMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNEN 396
Query: 248 QTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK---RWYNKSGCGMNKAIFK 304
+ KA EL+G++ SK+I P F + +I GF G + EA K C +K F
Sbjct: 397 RLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFT 456
Query: 305 LLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGK 362
+L+ C KG + A ++ + + C D+ + ++ L K +EA L ++ +
Sbjct: 457 ILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIAR 514
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 129/259 (49%), Gaps = 13/259 (5%)
Query: 109 ENARKVFDE-MPGRNCEQTVLSFNALL-GACVNSK--KFDEVDGLFKDLPHKLGIEPDLV 164
E+A K+FDE + ++C T +FN L+ G C K K E+ G+ G EPD+V
Sbjct: 188 EDAMKLFDEHLRFQSCNDTK-TFNILIRGLCGVGKAEKALELLGVMSGF----GCEPDIV 242
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGI-RLDLITFNTLLLGFYSNGRFADAEKIWET 223
+YNT+I+ F L+ A+ + +++ + D++T+ +++ G+ G+ +A + +
Sbjct: 243 TYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDD 302
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M+ + + P ++N +DG A + A E+ G+M S PDV TF +LI G+ G
Sbjct: 303 MLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQ 362
Query: 284 LEEAKR-WYNKSGCGM--NKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL 340
+ + R W + GM N + +L+ +C + L A L + S+ +
Sbjct: 363 VSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNP 422
Query: 341 VVDRLAKELRVEEAKELVE 359
V+D K +V EA +VE
Sbjct: 423 VIDGFCKAGKVNEANVIVE 441
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 112/270 (41%), Gaps = 11/270 (4%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFT-ARLIALYGKAAMFENARKVFDEM 118
Y +Q + E+ + K S + T +I+ Y KA A + D+M
Sbjct: 244 YNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDM 303
Query: 119 PGRNCEQTVLSFNALLGACVNSKKF---DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVD 175
T ++FN L+ + + +E+ G G PD+V++ ++I +
Sbjct: 304 LRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISF----GCFPDVVTFTSLIDGYCR 359
Query: 176 KGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRS 235
G + L EM +G+ + T++ L+ + R A ++ + + ++ P
Sbjct: 360 VGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFM 419
Query: 236 YNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS- 294
YN +DG + +A +V EM K+ PD TF LI G +G + EA ++K
Sbjct: 420 YNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMV 479
Query: 295 --GCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
GC +K L+ + + G A++L
Sbjct: 480 AIGCSPDKITVSSLLSCLLKAGMAKEAYHL 509
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 90/205 (43%), Gaps = 8/205 (3%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYE-MEKKGIRLDLITFNTLLLGFYSNGRFAD 216
G+ P+ ++ +F +KG L A LL + E +G + N+LL R D
Sbjct: 133 GVSPNNRLLGFLVSSFAEKGKLHFATALLLQSFEVEGC---CMVVNSLLNTLVKLDRVED 189
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
A K+++ + + +++N + GL + +KALEL+G M PD+ T+ LI+
Sbjct: 190 AMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQ 249
Query: 277 GFVNEGNLEEAKRWYN--KSG--CGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCL 332
GF L +A + KSG C + + ++ C+ G + A +L
Sbjct: 250 GFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIY 309
Query: 333 VDQAPLQLVVDRLAKELRVEEAKEL 357
++VD AK + A+E+
Sbjct: 310 PTNVTFNVLVDGYAKAGEMLTAEEI 334
>gi|15217608|ref|NP_171708.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806399|sp|O81908.2|PPR2_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g02060, chloroplastic; Flags: Precursor
gi|332189251|gb|AEE27372.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 710
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 122/271 (45%), Gaps = 15/271 (5%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI YG A +F+ + K+F M +VL+FN+LL + + LF ++
Sbjct: 144 LIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTY 203
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ PD ++NT+I F +D A + +ME D++T+NT++ G G+ A
Sbjct: 204 GVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIA 263
Query: 218 EKIWETMVN--MNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
+ M+ +V PNV SY + G ++++ +A+ + +M S+ + P+ T+ LI
Sbjct: 264 HNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLI 323
Query: 276 KGFVNEGNLEEAKRWYNKSGCGMNKAI---------FKLLVPFVCEKGDLDFAFNLCKRT 326
KG +E K G N A F +L+ C+ G LD A + +
Sbjct: 324 KGLSEAHRYDEIKDIL----IGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEM 379
Query: 327 FSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
+ + D A +++ L + A+ L
Sbjct: 380 LNMKLHPDSASYSVLIRTLCMRNEFDRAETL 410
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/375 (18%), Positives = 151/375 (40%), Gaps = 51/375 (13%)
Query: 22 KFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILE 81
++ S+IR + V F+ +G + + + L R ++ +
Sbjct: 139 RYFNSLIRSYGNAGLFQESVKLFQTMKQMG-ISPSVLTFNSLLSILLKRGRTGMAHDLFD 197
Query: 82 HQKQYKDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVN 139
++ ++ + +T LI + K +M + A ++F +M +C V+++N ++ G C
Sbjct: 198 EMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRA 257
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
K + L L + P++VSY T+++ + K +D A + ++M +G++ + +
Sbjct: 258 GKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAV 317
Query: 200 TFNTLLLGFYSNGRFAD-------------------------------------AEKIWE 222
T+NTL+ G R+ + A K+++
Sbjct: 318 TYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQ 377
Query: 223 TMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI-------NPDVFTFYALI 275
M+NM + P+ SY+ + L + + +A L E+ KE+ P + +
Sbjct: 378 EMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMF 437
Query: 276 KGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCL 332
+ G ++A++ + K G + +K L+ C +G A+ L +
Sbjct: 438 EYLCANGKTKQAEKVFRQLMKRGV-QDPPSYKTLITGHCREGKFKPAYELLVLMLRREFV 496
Query: 333 VDQAPLQLVVDRLAK 347
D +L++D L K
Sbjct: 497 PDLETYELLIDGLLK 511
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 78/152 (51%), Gaps = 7/152 (4%)
Query: 178 SLDSANTLLYEMEKKG---IRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVR 234
+L+ A L+ +E++ ++L FN+L+ + + G F ++ K+++TM M + P+V
Sbjct: 115 NLNVARNFLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVL 174
Query: 235 SYNARLDGLAIEKQTKKALELVGEM-RSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK 293
++N+ L L +T A +L EM R+ + PD +TF LI GF ++EA R +
Sbjct: 175 TFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKD 234
Query: 294 S---GCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
C + + ++ +C G + A N+
Sbjct: 235 MELYHCNPDVVTYNTIIDGLCRAGKVKIAHNV 266
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 122/292 (41%), Gaps = 21/292 (7%)
Query: 16 ATATGPKFIG--SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRF 73
AT P + +++RG + + V F G + N Y ++ L+ A R+
Sbjct: 274 ATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRG-LKPNAVTYNTLIKGLSEAHRY 332
Query: 74 RWIEEIL-EHQKQYKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFN 131
I++IL + + + T LI + A + A KVF EM S++
Sbjct: 333 DEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYS 392
Query: 132 ALLGACVNSKKFDEVDGLFKDLPHK---LG---IEPDLVSYNTIIKAFVDKGSLDSANTL 185
L+ +FD + LF +L K LG +P +YN + + G A +
Sbjct: 393 VLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKV 452
Query: 186 LYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAI 245
++ K+G++ D ++ TL+ G G+F A ++ M+ P++ +Y +DGL
Sbjct: 453 FRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLK 511
Query: 246 EKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY-NKSGC 296
+ A + + M P TF++++ E AKR + N+S C
Sbjct: 512 IGEALLAHDTLQRMLRSSYLPVATTFHSVLA--------ELAKRKFANESFC 555
>gi|410109903|gb|AFV61031.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
montevidensis]
Length = 431
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 152/334 (45%), Gaps = 30/334 (8%)
Query: 66 RLANAKRFRWI-----EEILEHQKQ----------YKDISKEGFTARL------IALYGK 104
RL +F W+ ++LEH + Y++I + G+ A L + + K
Sbjct: 96 RLTREHKF-WVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCK 154
Query: 105 AAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLV 164
A+ VFD + +V+S+N L+ + DE L K G++PD+
Sbjct: 155 DGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL-KSAMLASGVQPDVY 213
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
+Y+ +I + +D AN L EM KG+ + +TF TL+ G NGR A +I++ M
Sbjct: 214 TYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQM 273
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
++ ++ P++ +YN + GL + K+A L+ EM K + PD T+ LI G +G+L
Sbjct: 274 LSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDL 333
Query: 285 E---EAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLV 341
+ E ++ + ++ ++ L+ +C +G A + + S D ++
Sbjct: 334 DTAFEHRKRMIQENTRLDDVVYTALISGLCREGQSVDAEKMLREMLSVGLKPDARTYTMI 393
Query: 342 VDRLAKELRVEEA----KELVELGKTNSYCRYNL 371
++ K+ V + KE+ G S YN+
Sbjct: 394 INEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNV 427
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 87/180 (48%), Gaps = 1/180 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K + A +++ +M ++ ++++N L+ + L ++ K
Sbjct: 253 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMK- 311
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD ++Y T+I G LD+A M ++ RLD + + L+ G G+ DA
Sbjct: 312 GLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGQSVDA 371
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
EK+ M+++ ++P+ R+Y ++ + K +L+ EM+ P V T+ L+ G
Sbjct: 372 EKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
>gi|222422989|dbj|BAH19478.1| AT2G06000 [Arabidopsis thaliana]
Length = 536
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 131/298 (43%), Gaps = 41/298 (13%)
Query: 103 GKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPD 162
GKA E A ++ M G CE ++++N L+ S + ++ +FKD+ PD
Sbjct: 220 GKA---EKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPD 276
Query: 163 LVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI-- 220
+V+Y ++I + G + A++LL +M + GI +TFN L+ G+ G AE+I
Sbjct: 277 VVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRG 336
Query: 221 ---------------------------------WETMVNMNVRPNVRSYNARLDGLAIEK 247
WE M + PN +Y+ ++ L E
Sbjct: 337 KMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNEN 396
Query: 248 QTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK---RWYNKSGCGMNKAIFK 304
+ KA EL+G++ SK+I P F + +I GF G + EA K C +K F
Sbjct: 397 RLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFT 456
Query: 305 LLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGK 362
+L+ C KG + A ++ + + C D+ + ++ L K +EA L ++ +
Sbjct: 457 ILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIAR 514
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 129/259 (49%), Gaps = 13/259 (5%)
Query: 109 ENARKVFDE-MPGRNCEQTVLSFNALL-GACVNSK--KFDEVDGLFKDLPHKLGIEPDLV 164
E+A K+FDE + ++C T +FN L+ G C K K E+ G+ G EPD+V
Sbjct: 188 EDAMKLFDEHLRFQSCNDTK-TFNILIRGLCGVGKAEKALELLGVMSGF----GCEPDIV 242
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGI-RLDLITFNTLLLGFYSNGRFADAEKIWET 223
+YNT+I+ F L+ A+ + +++ + D++T+ +++ G+ G+ +A + +
Sbjct: 243 TYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDD 302
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M+ + + P ++N +DG A + A E+ G+M S PDV TF +LI G+ G
Sbjct: 303 MLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQ 362
Query: 284 LEEAKR-WYNKSGCGM--NKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL 340
+ + R W + GM N + +L+ +C + L A L + S+ +
Sbjct: 363 VSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNP 422
Query: 341 VVDRLAKELRVEEAKELVE 359
V+D K +V EA +VE
Sbjct: 423 VIDGFCKAGKVNEANVIVE 441
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 112/270 (41%), Gaps = 11/270 (4%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFT-ARLIALYGKAAMFENARKVFDEM 118
Y +Q + E+ + K S + T +I+ Y KA A + D+M
Sbjct: 244 YNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDM 303
Query: 119 PGRNCEQTVLSFNALLGACVNSKKF---DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVD 175
T ++FN L+ + + +E+ G G PD+V++ ++I +
Sbjct: 304 LRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISF----GCFPDVVTFTSLIDGYCR 359
Query: 176 KGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRS 235
G + L EM +G+ + T++ L+ + R A ++ + + ++ P
Sbjct: 360 VGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFM 419
Query: 236 YNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS- 294
YN +DG + +A +V EM K+ PD TF LI G +G + EA ++K
Sbjct: 420 YNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMV 479
Query: 295 --GCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
GC +K L+ + + G A++L
Sbjct: 480 AIGCSPDKITVSSLLSCLLKAGMAKEAYHL 509
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 90/205 (43%), Gaps = 8/205 (3%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYE-MEKKGIRLDLITFNTLLLGFYSNGRFAD 216
G+ P+ ++ +F +KG L A LL + E +G + N+LL R D
Sbjct: 133 GVSPNNRLLGFLVSSFAEKGKLHFATALLLQSFEVEGC---CMVVNSLLNTLVKLDRVED 189
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
A K+++ + + +++N + GL + +KALEL+G M PD+ T+ LI+
Sbjct: 190 AMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQ 249
Query: 277 GFVNEGNLEEAKRWYN--KSG--CGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCL 332
GF L +A + KSG C + + ++ C+ G + A +L
Sbjct: 250 GFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIY 309
Query: 333 VDQAPLQLVVDRLAKELRVEEAKEL 357
++VD AK + A+E+
Sbjct: 310 PTNVTFNVLVDGYAKAGEMLTAEEI 334
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 118/254 (46%), Gaps = 4/254 (1%)
Query: 97 RLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHK 156
+LI YG+ +A +F++ C TV +F L+ VNS +F+ + ++K L K
Sbjct: 35 KLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQK 94
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
G + D +YN +I+ F G LDSA + EM+ KG D T+ L+ GR +
Sbjct: 95 -GCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQE 153
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
A ++ M+ + PN+ +YN +D Q AL L EM+ + P V T+ L+
Sbjct: 154 ARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLD 213
Query: 277 GFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV 333
+ G + A++ ++K GC + + LV + + G ++ A + + V
Sbjct: 214 ALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAV 273
Query: 334 DQAPLQLVVDRLAK 347
D ++ LAK
Sbjct: 274 DLVNYNSLLATLAK 287
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 156/339 (46%), Gaps = 17/339 (5%)
Query: 38 KRLVDKFKKSSDLGRFRTNTGI-YTGTVQRLANA-KRFRWIEEILEHQKQYKDISKEGFT 95
K+LV +K L RF N I Y G +L +A + FR ++ +Y GF
Sbjct: 89 KKLV---QKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYT----YGF- 140
Query: 96 ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPH 155
L+ GKA + AR FD M R + ++N L+ A + D GLF ++
Sbjct: 141 --LVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKR 198
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
+ G +P +V+YN ++ A G + +A L ++M G D T++TL+ G +GR
Sbjct: 199 R-GFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVE 257
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
+A K++ MV+ V ++ +YN+ L LA + +L+ EM K +PD F+F ++
Sbjct: 258 EAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIM 317
Query: 276 KGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCL 332
+ A+ + + SGC + + +L+ GD A + + +
Sbjct: 318 DALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFI 377
Query: 333 VDQAPLQLVVDRLAKELRVEEAKELVELGKTNSYCRYNL 371
+ ++ LA + +V+EA ++E +T CR ++
Sbjct: 378 PETKTYNSLIHWLATDGQVDEAFAVLEEMETAG-CRPDV 415
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 108/228 (47%), Gaps = 4/228 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+A KA + K+ EM + SFN ++ A + K D +F +
Sbjct: 281 LLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVES- 339
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G +PDL+SYN +I ++ G A +L EM + G + T+N+L+ ++G+ +A
Sbjct: 340 GCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEA 399
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ E M RP+V +YN +D L + ++A L +M+ K + PD ++ I G
Sbjct: 400 FAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDG 459
Query: 278 FVNEGNLEEAKRWYNKS---GCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
+ L+EA + GC ++KA++++L+ GD + L
Sbjct: 460 LAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRAAHRAGDTELEAQL 507
>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
Length = 757
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 132/264 (50%), Gaps = 4/264 (1%)
Query: 25 GSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEIL-EHQ 83
G++I + K + V KF + D G + +++ V L ++ EE+ E
Sbjct: 381 GALIDALCKLGRVDDAVLKFNQMIDEG-MTPDIFVFSSLVYGLCTVDKWEKAEELFFEVL 439
Query: 84 KQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKF 143
Q + F + L + + E A+++ D M V+S+N L+ + +
Sbjct: 440 DQGIRLDTVFFNTLMCNLCREGRVME-AQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRI 498
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT 203
DE L D+ +G++PD V+YNT++ + +D A +L EM KG+ D++T+NT
Sbjct: 499 DEAAKLL-DVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNT 557
Query: 204 LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
+L G + GRF++A++++ +M+N + N+ +YN ++GL +A ++ + SK+
Sbjct: 558 ILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKD 617
Query: 264 INPDVFTFYALIKGFVNEGNLEEA 287
+ D+FT +I + G E+A
Sbjct: 618 LQLDIFTANIMIGALLKGGRKEDA 641
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 131/293 (44%), Gaps = 37/293 (12%)
Query: 102 YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEV---------DGL--- 149
Y K AM + A +FD+M + ++++ AL+ A + D+ +G+
Sbjct: 352 YAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPD 411
Query: 150 ---FKDLPHKL-------------------GIEPDLVSYNTIIKAFVDKGSLDSANTLLY 187
F L + L GI D V +NT++ +G + A L+
Sbjct: 412 IFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLID 471
Query: 188 EMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEK 247
M + G+R D+I++NTL+ G GR +A K+ + +V++ ++P+ +YN L G +
Sbjct: 472 LMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKAR 531
Query: 248 QTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNKAIFK 304
+ A L EM K + PDV T+ ++ G G EAK Y S MN +
Sbjct: 532 RIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYN 591
Query: 305 LLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
+++ +C+ +D AF + S+ +D +++ L K R E+A +L
Sbjct: 592 IIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMDL 644
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 108/215 (50%), Gaps = 4/215 (1%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
+ A K+ D + + +++N LL +++ D+ LF+++ K G+ PD+V+YN
Sbjct: 498 IDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMK-GLTPDVVTYN 556
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
TI+ G A L M ++++ T+N ++ G N +A K++ ++ +
Sbjct: 557 TILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSK 616
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+++ ++ + N + L + + A++L + + + PDV T+ + + + EG+LEE
Sbjct: 617 DLQLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEEL 676
Query: 288 KRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFA 319
++ ++G N + LV ++ +GD++ A
Sbjct: 677 DELFSAMEENGTAPNSRMLNALVRWLLHRGDINRA 711
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 109/246 (44%), Gaps = 13/246 (5%)
Query: 118 MPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFK------DLPHKLGIEPDLVSYNTIIK 171
MP C V S++ LL N K+ +E L D H P++V+Y T+I
Sbjct: 155 MPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHT----PNVVTYTTVID 210
Query: 172 AFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRP 231
+D A + M KG+R + T+ L+ G+ S G++ + ++ + M ++P
Sbjct: 211 GLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQP 270
Query: 232 NVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY 291
+ Y LD L + +A + + K I P+V + L+ G+ EG+L E +
Sbjct: 271 DCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFL 330
Query: 292 N---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKE 348
+ +G + IF ++ +K +D A ++ + +R + ++D L K
Sbjct: 331 DLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKL 390
Query: 349 LRVEEA 354
RV++A
Sbjct: 391 GRVDDA 396
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/314 (20%), Positives = 125/314 (39%), Gaps = 6/314 (1%)
Query: 51 GRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTAR-LIALYGKAAMFE 109
G N YT + L A+ + + +H K + T LI Y ++
Sbjct: 196 GSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMID-KGVRPNNHTYTCLIHGYLSIGKWK 254
Query: 110 NARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTI 169
++ EM + + LL + + E +F + K GI+P++ Y +
Sbjct: 255 EVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRK-GIKPNVTIYGIL 313
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
+ + +GSL ++ L M G+ D FN + + +A I++ M +
Sbjct: 314 LHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRL 373
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
PN+ +Y A +D L + A+ +M + + PD+F F +L+ G E+A+
Sbjct: 374 SPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEE 433
Query: 290 WYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLA 346
+ + G ++ F L+ +C +G + A L D +VD
Sbjct: 434 LFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHC 493
Query: 347 KELRVEEAKELVEL 360
R++EA +L+++
Sbjct: 494 LTGRIDEAAKLLDV 507
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 107/237 (45%), Gaps = 8/237 (3%)
Query: 130 FNALLGACVNSKKFDE-VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
F+ LL ++K+ DE D L + +P + G PD+ SY+ ++K F ++ + A LL
Sbjct: 131 FSQLLKGLCDAKRVDEATDILLRRMP-EFGCTPDVFSYSILLKGFCNEKRAEEALELLSM 189
Query: 189 MEKKG---IRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAI 245
M G +++T+ T++ G A+ +++ M++ VRPN +Y + G
Sbjct: 190 MADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLS 249
Query: 246 EKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAI 302
+ K+ ++++ EM + + PD + + L+ G EA+ ++ + G N I
Sbjct: 250 IGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTI 309
Query: 303 FKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ +L+ +G L + D ++ AK+ ++EA + +
Sbjct: 310 YGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFD 366
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 89/196 (45%), Gaps = 1/196 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+ Y KA ++A +F EM + V+++N +L + +F E L+ + +
Sbjct: 523 LLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINS- 581
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
+ ++ +YN II +D A + + + K ++LD+ T N ++ GR DA
Sbjct: 582 RTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDA 641
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ T+ + P+V +Y + L E ++ EL M P+ AL++
Sbjct: 642 MDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRW 701
Query: 278 FVNEGNLEEAKRWYNK 293
++ G++ A + +K
Sbjct: 702 LLHRGDINRAGAYLSK 717
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 104/265 (39%), Gaps = 13/265 (4%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVN---SKKFDEVDGLFKDLPHKLGIE--PD 162
+A K+FDEM +V +FN LL A S + V LF + + I+ P
Sbjct: 32 LNDALKLFDEMLTHARPASVRAFNQLLTAVSRARCSSASELVVSLFNRMIRECSIKVAPS 91
Query: 163 LVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRL-DLITFNTLLLGFYSNGRFADAEKI- 220
+Y +I F G L + K G R+ D + F+ LL G R +A I
Sbjct: 92 SFTYTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDEATDIL 151
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK---EINPDVFTFYALIKG 277
M P+V SY+ L G EK+ ++ALEL+ M P+V T+ +I G
Sbjct: 152 LRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDG 211
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
++ AK + G N + L+ G + + + D
Sbjct: 212 LCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPD 271
Query: 335 QAPLQLVVDRLAKELRVEEAKELVE 359
+++D L K R EA+ + +
Sbjct: 272 CYIYAVLLDYLCKNGRCTEARNIFD 296
>gi|255660836|gb|ACU25587.1| pentatricopeptide repeat-containing protein [Lampayo castellani]
Length = 418
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 131/283 (46%), Gaps = 10/283 (3%)
Query: 86 YKDISKEGFTARL------IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
YK+I + G+ A L + + K A+ VFDE+ +V+SFN L+ +
Sbjct: 124 YKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIR 183
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
DE L K H G++PD+ +Y+ +I + ++ AN L EM G+ + +
Sbjct: 184 LGDLDEGFRL-KSAMHASGVQPDVYTYSVLINGLCKESKMNDANELFGEMIGNGLVPNGV 242
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
TF TL+ G G A + ++ M+ P++ +YN + GL + K+A +L+ EM
Sbjct: 243 TFTTLIDGHCKTGSIDLAMETYKEMLRQGFSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLEEA---KRWYNKSGCGMNKAIFKLLVPFVCEKGDL 316
K + PD T+ LI G EG+LE A ++ K ++ + L+ +C +G
Sbjct: 303 SMKGLKPDKITYTTLIDGSCKEGDLETALYYRKRMIKENIRLDDVAYTALISGLCREGQS 362
Query: 317 DFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
A + + S D ++++ K+ V+ +L++
Sbjct: 363 VDAEKMLREMLSVGLKPDNGTYTMIINEFCKKGDVKTGSKLLK 405
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 82/173 (47%), Gaps = 1/173 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K + A + + EM + ++++N L+ + L ++ K
Sbjct: 247 LIDGHCKTGSIDLAMETYKEMLRQGFSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMK- 305
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD ++Y T+I +G L++A M K+ IRLD + + L+ G G+ DA
Sbjct: 306 GLKPDKITYTTLIDGSCKEGDLETALYYRKRMIKENIRLDDVAYTALISGLCREGQSVDA 365
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
EK+ M+++ ++P+ +Y ++ + K +L+ EM+ P V T
Sbjct: 366 EKMLREMLSVGLKPDNGTYTMIINEFCKKGDVKTGSKLLKEMQRDGHVPCVVT 418
>gi|42562903|ref|NP_176512.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|114050643|gb|ABI49471.1| At1g63230 [Arabidopsis thaliana]
gi|332195952|gb|AEE34073.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 323
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 117/247 (47%), Gaps = 6/247 (2%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
E+A + +M + + V+ +NA++ LF ++ H GI PD+++Y+
Sbjct: 58 ESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEM-HDKGIFPDVITYSG 116
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
+I +F G A LL +M ++ I D++TF+ L+ G+ ++AE+I+ M+
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
+ P +YN+ +DG + + A ++ M SK +PDV TF LI G+ ++
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236
Query: 289 RWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRL 345
+ ++ G N + L+ C+ GDLD A +L S + Q ++ L
Sbjct: 237 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASL 296
Query: 346 A--KELR 350
KELR
Sbjct: 297 CSKKELR 303
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 112/250 (44%), Gaps = 22/250 (8%)
Query: 118 MPGRNCEQTVLSFNALL-GACVNSKKFDE---VDGLFKDLPHKLGIEPDLVSYNTIIKAF 173
M C V++F L+ G C + VD + ++ G +P Y TII
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEE-----GHQP----YGTIINGL 51
Query: 174 VDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNV 233
G +SA LL +ME+ I+ ++ +N ++ +G A+ ++ M + + P+V
Sbjct: 52 CKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDV 111
Query: 234 RSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK 293
+Y+ +D + A +L+ +M ++INPDV TF ALI V EG + EA+ Y
Sbjct: 112 ITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIY-- 169
Query: 294 SGCGMNKAIFKLLVPF------VCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAK 347
G + + IF + + C++ L+ A + S+ C D +++ K
Sbjct: 170 -GDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCK 228
Query: 348 ELRVEEAKEL 357
RV+ E+
Sbjct: 229 AKRVDNGMEI 238
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 113/239 (47%), Gaps = 4/239 (1%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I + K+ + + F + D G F + Y+G + + R+ E++L +
Sbjct: 81 AIIDRLCKDGHHIHAQNLFTEMHDKGIF-PDVITYSGMIDSFCRSGRWTDAEQLLRDMIE 139
Query: 86 YKDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
+ I+ + T + LI K A +++ +M R T +++N+++ + +
Sbjct: 140 -RQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLN 198
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
+ + + K PD+V+++T+I + +D+ + EM ++GI + +T+ TL
Sbjct: 199 DAKRMLDSMASK-SCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTL 257
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
+ GF G A+ + M++ V PN ++ + L L +K+ +KA ++ +++ E
Sbjct: 258 IHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQKSE 316
>gi|218197756|gb|EEC80183.1| hypothetical protein OsI_22045 [Oryza sativa Indica Group]
Length = 577
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 112/231 (48%), Gaps = 6/231 (2%)
Query: 134 LGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDS--ANTLLYEMEK 191
+G S +FD+ L D IEPDLVS+NT+I A G L + A LL+E+ +
Sbjct: 1 MGVYARSGRFDDARQLL-DAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALELLHEVRQ 59
Query: 192 KGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKK 251
G+R D IT+NTL+ DA ++E M+ RP++ +YNA + + ++
Sbjct: 60 AGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQE 119
Query: 252 ALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVP 308
A + E+ K PD T+ +L+ F EG++E +R K+G + + ++
Sbjct: 120 AELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIH 179
Query: 309 FVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ G LD A L + C D ++VD L K R+ EA +++E
Sbjct: 180 MYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLE 230
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 103/196 (52%), Gaps = 1/196 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI+ + + ++A VF+EM C + ++NA++ K E + +FK+L K
Sbjct: 72 LISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELMFKELVEK- 130
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G +PD V+YN+++ AF +G ++ + E+ K G R D IT+NT++ + GR A
Sbjct: 131 GFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGKMGRLDLA 190
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+++ M + P+ +Y +D L + +A +++ EM + P + TF ALI
Sbjct: 191 LGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLVTFSALICA 250
Query: 278 FVNEGNLEEAKRWYNK 293
+ G ++A+R +++
Sbjct: 251 YAKSGRQDDAERTFDR 266
>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
Length = 816
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 129/298 (43%), Gaps = 39/298 (13%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI Y M + A +F+EM + V+++ ++ A K D+ F + +
Sbjct: 402 LIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQ- 460
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ PD +Y+ +I+ F GSL A L+ E+ G+RLD++ F +++ GR DA
Sbjct: 461 GVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDA 520
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ I++ VN+ + P+ YN +DG + + +KAL + M S I P+V + L+ G
Sbjct: 521 QNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNG 580
Query: 278 FVNEGNLEEAKRWY--------------------------------------NKSGCGMN 299
+ G ++E + +SG MN
Sbjct: 581 YCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMN 640
Query: 300 KAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
K + +++ + + D A L K + +D L ++ + + RVEEAK+L
Sbjct: 641 KCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDL 698
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 162/373 (43%), Gaps = 23/373 (6%)
Query: 16 ATATGPKFIG--SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRF 73
T P + +VI G +KE ++ + D FK+ G + Y+ V L A+
Sbjct: 214 GTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRG-IPPDLVTYSSVVHALCKARAM 272
Query: 74 RWIEEILEHQKQYKDISKEGFTA-RLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNA 132
E L Q K + + +T LI Y ++ A +VF EM ++ V++ N
Sbjct: 273 DKAEAFLR-QMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNT 331
Query: 133 LLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKK 192
L+G+ K E +F + K G PD+ SY ++ + KG L L M
Sbjct: 332 LMGSLCKYGKIKEARDVFDTMAMK-GQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGD 390
Query: 193 GIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKA 252
GI + TFN L+ + + G A I+ M + V+P+V +Y + L + A
Sbjct: 391 GIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDA 450
Query: 253 LELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPF 309
+E +M + + PD + ++ LI+GF G+L +AK ++ +G ++ F ++
Sbjct: 451 MEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINN 510
Query: 310 VCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVD------RLAKELRVEEA-------KE 356
+C+ G + A N+ T + D +++D ++ K LRV +A
Sbjct: 511 LCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPN 570
Query: 357 LVELGK-TNSYCR 368
+V G N YC+
Sbjct: 571 VVGYGTLVNGYCK 583
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 131/275 (47%), Gaps = 9/275 (3%)
Query: 53 FRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ----YKDISKEGFTARLIALYGKAAMF 108
R + I + ++ AKR +IL H+ D+ + + GK+
Sbjct: 144 LRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQA 203
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
++ ++ E G C V+++N ++ ++ LFK++ + GI PDLV+Y++
Sbjct: 204 DDLLRMMAE-GGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQR-GIPPDLVTYSS 261
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
++ A ++D A L +M KG+ D T+N L+ G+ S G++ +A ++++ M +
Sbjct: 262 VVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQS 321
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
+ P+V + N + L + K+A ++ M K NPDVF++ ++ G+ +G L +
Sbjct: 322 ILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMT 381
Query: 289 RWYN-KSGCGMNKAI--FKLLVPFVCEKGDLDFAF 320
++ G G+ I F +L+ G LD A
Sbjct: 382 DLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAM 416
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 96/198 (48%), Gaps = 4/198 (2%)
Query: 102 YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEP 161
Y E A +VFD M E V+ + L+ + DE LF+++ K GI+P
Sbjct: 546 YCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQK-GIKP 604
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
+ YN II + G A +EM + GI ++ T++ +L G + N F +A ++
Sbjct: 605 STILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLF 664
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
+ + MNV+ ++ + N + G+ ++ ++A +L + + P T+ +I + E
Sbjct: 665 KELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKE 724
Query: 282 GNLEEAKRWYNK---SGC 296
G +EEA+ ++ +GC
Sbjct: 725 GLVEEAEDMFSSMQNAGC 742
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 108/258 (41%), Gaps = 9/258 (3%)
Query: 40 LVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLI 99
LV K +K+ + + GI V + I I E ++++ ++G I
Sbjct: 548 LVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTI 607
Query: 100 ALYGKA--AMFENARKV-----FDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKD 152
LY +FE R V F EM +++ +L ++ FDE LFK+
Sbjct: 608 -LYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKE 666
Query: 153 LPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNG 212
L + ++ D+++ NT+I ++ A L + + G+ +T++ ++ G
Sbjct: 667 L-RAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEG 725
Query: 213 RFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFY 272
+AE ++ +M N P+ R N + L + + +A + ++ + + + T
Sbjct: 726 LVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAM 785
Query: 273 ALIKGFVNEGNLEEAKRW 290
L+ F ++G E R+
Sbjct: 786 LLVDLFSSKGTCREQIRF 803
>gi|242088695|ref|XP_002440180.1| hypothetical protein SORBIDRAFT_09g027340 [Sorghum bicolor]
gi|241945465|gb|EES18610.1| hypothetical protein SORBIDRAFT_09g027340 [Sorghum bicolor]
Length = 437
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 142/337 (42%), Gaps = 49/337 (14%)
Query: 66 RLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQ 125
RLA A+ F + +L + + + A LI G + + A VF +P C
Sbjct: 66 RLARARLFPLVPPLLTALRTLRVPLQPTAFAALIDHLGAFSRPDAALLVFRAVPA-FCSH 124
Query: 126 TVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTL 185
+ +F+ALL + V + + D + + P KLG+ + VSYN I+K + A +
Sbjct: 125 SNATFHALLHSLVCNGRVDAARDMLPEAP-KLGVRTNAVSYNIILKGVCHRDGFSGARVV 183
Query: 186 LYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAI 245
L EM +G+R ++TFNTL+ G A AE++ + M +V PN +Y + GL
Sbjct: 184 LDEMLARGLRPTVVTFNTLVGSACREGELAAAEQLMDEMARRSVPPNAVTYALLMQGLCD 243
Query: 246 EKQ---TKKAL--------------------------------ELVGEMRSKEINPDVFT 270
+ KK L L+ +MR +++ PD +
Sbjct: 244 AGRYDDAKKLLFDMEYRDCQPDVTNYGVLMSACAACGDAGGIRGLISDMRKRKLTPDDAS 303
Query: 271 FYALIKGFVNEGNLEEAKRWYN----KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRT 326
+ LIK + G ++EA R K G + A +++L+ CE D D R
Sbjct: 304 YNVLIKCLCDAGKVDEAHRALVEMQLKDGTVPSAATYRVLLDGCCEARDFDLGL----RV 359
Query: 327 FSERCLVDQAPLQLVVDRLAKEL----RVEEAKELVE 359
F+ PL L RL + L + EEA ++E
Sbjct: 360 FNAMLASGHCPLALTFRRLVRGLGEDGKAEEACFVLE 396
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 71/170 (41%), Gaps = 37/170 (21%)
Query: 105 AAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLV 164
A +++A+K+ +M R+C+ V ++ L+ AC + GL D+ K + PD
Sbjct: 244 AGRYDDAKKLLFDMEYRDCQPDVTNYGVLMSACAACGDAGGIRGLISDM-RKRKLTPDDA 302
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKK-------------------------GIRL--- 196
SYN +IK D G +D A+ L EM+ K G+R+
Sbjct: 303 SYNVLIKCLCDAGKVDEAHRALVEMQLKDGTVPSAATYRVLLDGCCEARDFDLGLRVFNA 362
Query: 197 --------DLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNA 238
+TF L+ G +G+ +A + E M +R + + + +
Sbjct: 363 MLASGHCPLALTFRRLVRGLGEDGKAEEACFVLEQMGQRGMRLDAQGWQS 412
>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 559
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 106/204 (51%), Gaps = 3/204 (1%)
Query: 159 IEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAE 218
++P++V YNTII + ++ A L EM KGI D++T+N L+ GF G+ DA
Sbjct: 208 VQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDAT 267
Query: 219 KIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGF 278
++ M+ N+ PNV ++N +DG E++ K+A ++ M + I PDVFT+ +L+ +
Sbjct: 268 DLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRY 327
Query: 279 VNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQ 335
+ +AK +N + G N + +++ C+ +D A NL K + D
Sbjct: 328 CLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDV 387
Query: 336 APLQLVVDRLAKELRVEEAKELVE 359
++D L K ++ A +LV+
Sbjct: 388 VTYNSLIDGLCKLGKISYALKLVD 411
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 122/258 (47%), Gaps = 4/258 (1%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K A ++ + G+ + V+ +N ++ + K +E L+ ++ K GI PD+
Sbjct: 189 KVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSK-GISPDV 247
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
V+YN +I F G + A L +M + I ++ TFN L+ GF R +A+ +
Sbjct: 248 VTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAM 307
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M+ ++P+V +YN+ +D + K+ KA + + + +NP++ ++ +I GF
Sbjct: 308 MMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKK 367
Query: 284 LEEAKRWYNKSGCG---MNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL 340
++EA + + C + + L+ +C+ G + +A L D+
Sbjct: 368 VDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNS 427
Query: 341 VVDRLAKELRVEEAKELV 358
++D L K +V++A L+
Sbjct: 428 ILDALCKNHQVDKAIALL 445
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 124/260 (47%), Gaps = 6/260 (2%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEPD 162
K + A ++ EM + V+++NAL+ G C+ K D D LF + + I P+
Sbjct: 224 KVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATD-LFNKMIFE-NINPN 281
Query: 163 LVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWE 222
+ ++N ++ F + L A +L M K+GI+ D+ T+N+L+ + A+ I+
Sbjct: 282 VYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFN 341
Query: 223 TMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEG 282
T+ V PN+ SY+ + G K+ +A+ L EM I PDV T+ +LI G G
Sbjct: 342 TISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLG 401
Query: 283 NLEEAKRWYNKS---GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQ 339
+ A + ++ G +K + ++ +C+ +D A L + E D
Sbjct: 402 KISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYT 461
Query: 340 LVVDRLAKELRVEEAKELVE 359
+VD L K R+E+A+ + E
Sbjct: 462 TLVDGLCKNGRLEDARIVFE 481
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 128/264 (48%), Gaps = 4/264 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+ + K + A+ V M + + V ++N+L+ K+ ++ +F + +
Sbjct: 288 LVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQR- 346
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ P++ SY+ +I F +D A L EM I D++T+N+L+ G G+ + A
Sbjct: 347 GVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYA 406
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
K+ + M + V + +YN+ LD L Q KA+ L+ +M+ + I PD+ T+ L+ G
Sbjct: 407 LKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDG 466
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
G LE+A+ + G ++ I+ ++ C G D + +L + C+ +
Sbjct: 467 LCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPN 526
Query: 335 QAPLQLVVDRLAKELRVEEAKELV 358
++++ L + ++A++L+
Sbjct: 527 AVTYEIIICSLFDKDENDKAEKLL 550
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 98/205 (47%), Gaps = 3/205 (1%)
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
K+G EP++++ T+IK KG + A ++ G L+ +++ TL+ G G+ +
Sbjct: 135 KMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTS 194
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
A ++ + V+PNV YN +D + K +A +L EM SK I+PDV T+ ALI
Sbjct: 195 AALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALI 254
Query: 276 KGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCL 332
GF G +++A +NK N F +LV C++ L A N+ +
Sbjct: 255 SGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIK 314
Query: 333 VDQAPLQLVVDRLAKELRVEEAKEL 357
D ++DR V +AK +
Sbjct: 315 PDVFTYNSLMDRYCLVKEVNKAKHI 339
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 75/152 (49%), Gaps = 1/152 (0%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A K+ DEM R +++N++L A + + D+ L + + GI+PD+ +Y T++
Sbjct: 406 ALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDE-GIQPDICTYTTLV 464
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
G L+ A + ++ KG LD+ + ++ GF S+G F ++ + M
Sbjct: 465 DGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCI 524
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
PN +Y + L + + KA +L+ EM ++
Sbjct: 525 PNAVTYEIIICSLFDKDENDKAEKLLREMITR 556
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 94/249 (37%), Gaps = 38/249 (15%)
Query: 150 FKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL----------- 198
F L H+ +P + + I+ + V + +L +ME GI DL
Sbjct: 59 FNRLLHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFS 118
Query: 199 ------------------------ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVR 234
IT TL+ G G+ A + + +V + N
Sbjct: 119 QLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKV 178
Query: 235 SYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK- 293
SY ++GL QT AL+L+ + K + P+V + +I + EA Y++
Sbjct: 179 SYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEM 238
Query: 294 --SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRV 351
G + + L+ C G + A +L + E + ++VD KE R+
Sbjct: 239 VSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRL 298
Query: 352 EEAKELVEL 360
+EAK ++ +
Sbjct: 299 KEAKNVLAM 307
>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 927
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 148/300 (49%), Gaps = 12/300 (4%)
Query: 80 LEHQKQYKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCE-QTVLSFNALLGAC 137
L Q + K+I F LI + K E A K+FDE C+ + ++N+LL
Sbjct: 406 LYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVA--CDIANIFTYNSLLSWL 463
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLD 197
K E L++ + K G+ P VSYN++I +G+LD A ++ +M G++ +
Sbjct: 464 CKEGKMSEATTLWQKMLDK-GLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPN 522
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
+IT++ L+ G++ NG A +++ MV+ N+ P+ +YN +++GL +T +A +++
Sbjct: 523 VITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLK 582
Query: 258 EMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKG 314
+ K P T+ +++ GF+ EG++ A Y +SG N + L+ C+
Sbjct: 583 KFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNN 642
Query: 315 DLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA----KELVELGKTNSYCRYN 370
+ D A + ++ +D A ++D K+ +E A EL++ G + + YN
Sbjct: 643 NTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYN 702
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 99/200 (49%), Gaps = 4/200 (2%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A K+ +EM + E + ++ AL+ + + LF +L G+ P+ V YN++I
Sbjct: 647 ALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDG-GLSPNSVIYNSLI 705
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
+ + ++++A L M +GI DL T+ TL+ G GR A ++ M +
Sbjct: 706 SGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGII 765
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
P++ Y ++GL + Q + A +++ EM I P+V + ALI G GNL+EA R
Sbjct: 766 PDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRL 825
Query: 291 YNK---SGCGMNKAIFKLLV 307
+N+ G N + +L+
Sbjct: 826 HNEMLDKGLTPNDTTYDILI 845
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 123/261 (47%), Gaps = 6/261 (2%)
Query: 102 YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEP 161
Y K E A VFD M N + ++N + + E + K K G P
Sbjct: 533 YFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEK-GFVP 591
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
++YN+I+ F+ +GS+ SA T EM + G+ ++IT+ TL+ GF N A K+
Sbjct: 592 VCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMR 651
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
M N + ++ +Y A +DG ++ + A L E+ ++P+ + +LI G+ N
Sbjct: 652 NEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNL 711
Query: 282 GNLEEA----KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAP 337
N+E A KR + G + + L+ + ++G L A +L ++ + D
Sbjct: 712 NNMEAALNLQKRMLGE-GISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIII 770
Query: 338 LQLVVDRLAKELRVEEAKELV 358
++++ L + ++E A++++
Sbjct: 771 YTVLINGLCGKGQLENAQKIL 791
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 110/223 (49%), Gaps = 3/223 (1%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
E A+K F E R + +++ ++ A + + GL KD+ K G P ++ +
Sbjct: 261 EEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKNLDVELACGLLKDMRDK-GWVPSEGTFTS 319
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
+I A V +G++ A L EM G++++++ TL+ G+ + A + ++ M
Sbjct: 320 VIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENG 379
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
PN +Y ++ KA +L +M++K I P VF +LI+GF+ + EEA
Sbjct: 380 PSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEAS 439
Query: 289 RWYNKS-GCGM-NKAIFKLLVPFVCEKGDLDFAFNLCKRTFSE 329
+ ++++ C + N + L+ ++C++G + A L ++ +
Sbjct: 440 KLFDEAVACDIANIFTYNSLLSWLCKEGKMSEATTLWQKMLDK 482
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 85/194 (43%), Gaps = 12/194 (6%)
Query: 130 FNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSY----NTIIKAFVDKGSLDSANTL 185
+N LL + + + K ++ G F L +E D+V + N ++ A V + A +
Sbjct: 177 YNYLLNSYIKANKLNDAIGCFNRL-----VESDIVPWIKFLNFLLTALVKNDMIYEAREV 231
Query: 186 LYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAI 245
+M KG+ D T + ++ + +A+K + + V+ + +Y+ +
Sbjct: 232 YEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCK 291
Query: 246 EKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAI 302
+ A L+ +MR K P TF ++I V +GN+ EA R ++ G MN +
Sbjct: 292 NLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVV 351
Query: 303 FKLLVPFVCEKGDL 316
LV C++ L
Sbjct: 352 ATTLVKGYCKQDKL 365
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 76/164 (46%), Gaps = 3/164 (1%)
Query: 197 DLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELV 256
D+ +N LL + + DA + +V ++ P ++ N L L +A E+
Sbjct: 173 DIRIYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYEAREVY 232
Query: 257 GEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS---GCGMNKAIFKLLVPFVCEK 313
+M K ++ D FT + +++ + + N EEAK+++ ++ G ++ A + +++ C+
Sbjct: 233 EKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKN 292
Query: 314 GDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
D++ A L K + + + V+ K+ + EA L
Sbjct: 293 LDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRL 336
>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Vitis vinifera]
Length = 686
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 125/276 (45%), Gaps = 6/276 (2%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMP 119
Y + L N ++ + +L K + + ++ K M A V D M
Sbjct: 328 YNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMI 387
Query: 120 GRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGS 178
R E V+++ AL+ G C+ S + DE +F + HK G P++ SYN +I +
Sbjct: 388 KRGVEPDVVTYTALMDGHCLRS-EMDEAVKVFDTMVHK-GCVPNVRSYNILINGYCQIQR 445
Query: 179 LDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNA 238
+D A LL +M +G+ D +T+NTL+ G GR A ++ MV P++ +Y
Sbjct: 446 MDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRI 505
Query: 239 RLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY-NKSGCG 297
LD L +A+ L+ + ++ D+ + I G G LE A+ + N S G
Sbjct: 506 LLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKG 565
Query: 298 MNKAI--FKLLVPFVCEKGDLDFAFNLCKRTFSERC 331
+ + + +++ +C++G LD A L ++ C
Sbjct: 566 LQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGC 601
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 114/244 (46%), Gaps = 4/244 (1%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
+ A KVFD M + C V S+N L+ ++ D+ GL + + + G+ D V+YN
Sbjct: 411 MDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQ-GLIADTVTYN 469
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
T+I G L A L +EM G DL+T+ LL N A+A + + +
Sbjct: 470 TLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGS 529
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
N+ ++ YN +DG+ + + A +L + SK + PDV T+ +I G G L+EA
Sbjct: 530 NLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEA 589
Query: 288 KRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDR 344
+ + K +GC + I+ ++ + A L + +E D + L+V+
Sbjct: 590 NKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQEMLAEGFSADVSTTTLIVEM 649
Query: 345 LAKE 348
L+ +
Sbjct: 650 LSDD 653
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 126/250 (50%), Gaps = 4/250 (1%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A +F EM + + ++N+L+ A N ++ V L ++ + I P++V ++T++
Sbjct: 309 AFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNS-KIMPNVVVFSTVV 367
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
A +G + A+ ++ M K+G+ D++T+ L+ G +A K+++TMV+
Sbjct: 368 DALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCV 427
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
PNVRSYN ++G ++ KA+ L+ +M + + D T+ LI G + G L+ A
Sbjct: 428 PNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIAL 487
Query: 291 YNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAK 347
+++ SG + +++L+ ++C+ L A L K D + +D + +
Sbjct: 488 FHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCR 547
Query: 348 ELRVEEAKEL 357
+E A++L
Sbjct: 548 AGELEAARDL 557
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 90/170 (52%), Gaps = 3/170 (1%)
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
KLG +PD ++NT+I+ +G + A L + +G + D++T+ TL+ G G +
Sbjct: 213 KLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTS 272
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
A ++ +MV N RPNV +YN +D L ++Q +A L EM +K I+PD+FT+ +LI
Sbjct: 273 AAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLI 332
Query: 276 KGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
N + N+ S N +F +V +C++G + A ++
Sbjct: 333 HALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDV 382
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 115/268 (42%), Gaps = 8/268 (2%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A +FD+ G + V+++ L+ L + + K P++++YNTII
Sbjct: 239 ALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQK-NCRPNVIAYNTII 297
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
+ + A L EM KGI D+ T+N+L+ + + + MVN +
Sbjct: 298 DSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIM 357
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
PNV ++ +D L E A ++V M + + PDV T+ AL+ G ++EA +
Sbjct: 358 PNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKV 417
Query: 291 YN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAK 347
++ GC N + +L+ C+ +D A L ++ + + D ++ L
Sbjct: 418 FDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCH 477
Query: 348 ELRVEEA----KELVELGKTNSYCRYNL 371
R++ A E+V G+ Y +
Sbjct: 478 VGRLQHAIALFHEMVASGQIPDLVTYRI 505
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 7/172 (4%)
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
P V + ++ + + +L +M+ GI D+ T N L+ F R A +
Sbjct: 148 PSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSV 207
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
++ + +P+ ++N + GL +E + +AL L + + PDV T+ L+ G
Sbjct: 208 LAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCK 267
Query: 281 EGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSE 329
GN A R + C N + ++ +C+ + AFNL FSE
Sbjct: 268 VGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNL----FSE 315
>gi|356513567|ref|XP_003525484.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 857
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 134/287 (46%), Gaps = 13/287 (4%)
Query: 36 NLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFT 95
++ R +D FK L F ++ QR + R + + Q+Q E
Sbjct: 84 SIARCLDPFKNKLSLNDFAL---VFKEFAQRGDWQRSLRLFKYM---QRQIWCKPNEHIH 137
Query: 96 ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPH 155
+I L G+ + + R+VFDEMP +TV S+ A++ A + +F L +
Sbjct: 138 TIMITLLGREGLLDKCREVFDEMPSNGVVRTVYSYTAIINAYGRNGQFHASLELLNGMKQ 197
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTL--LYEMEKKGIRLDLITFNTLLLGFYSNGR 213
+ + P +++YNT+I A +G LD L EM +GI+ D+IT+NTLL G
Sbjct: 198 ER-VSPSILTYNTVINACA-RGGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGL 255
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
+AE ++ TM + P++ +Y+ + + +K EL+ EM PD+ ++
Sbjct: 256 GDEAEMVFRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMECGGNLPDITSYNV 315
Query: 274 LIKGFVNEGNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKGDLD 317
L++ + G+++EA R +GC N A + +L+ + G D
Sbjct: 316 LLEAYAELGSIKEAMGVFRQMQAAGCVANAATYSVLLNLYGKHGRYD 362
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 99/229 (43%), Gaps = 1/229 (0%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMP 119
Y+ VQ R + E+L + ++ L+ Y + + A VF +M
Sbjct: 278 YSYLVQTFGKLNRLEKVSELLREMECGGNLPDITSYNVLLEAYAELGSIKEAMGVFRQMQ 337
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL 179
C +++ LL ++D+V LF ++ +PD +YN +I+ F + G
Sbjct: 338 AAGCVANAATYSVLLNLYGKHGRYDDVRDLFLEMKVS-NTDPDAGTYNILIQVFGEGGYF 396
Query: 180 DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNAR 239
TL ++M ++ + ++ T+ L+ G + DA+KI M V P+ ++Y
Sbjct: 397 KEVVTLFHDMAEENVEPNMQTYEGLIFACGKGGLYEDAKKILLHMNEKGVVPSSKAYTGV 456
Query: 240 LDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
++ ++AL + M NP V T+ +LI F G +EA+
Sbjct: 457 IEAFGQAALYEEALVMFNTMNEVGSNPTVETYNSLIHAFARGGLYKEAE 505
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 106/236 (44%), Gaps = 4/236 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI ++G+ F+ +F +M N E + ++ L+ AC +++ + + K
Sbjct: 386 LIQVFGEGGYFKEVVTLFHDMAEENVEPNMQTYEGLIFACGKGGLYEDAKKILLHMNEK- 444
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ P +Y +I+AF + A + M + G + T+N+L+ F G + +A
Sbjct: 445 GVVPSSKAYTGVIEAFGQAALYEEALVMFNTMNEVGSNPTVETYNSLIHAFARGGLYKEA 504
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
E I M ++ +V S+N ++ Q ++A++ EM P+ T A++
Sbjct: 505 EAILSRMNESGLKRDVHSFNGVIEAFRQGGQYEEAVKSYVEMEKANCEPNELTLEAVLSI 564
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSER 330
+ + G ++E + + + SG + + +++ + L+ A+NL + R
Sbjct: 565 YCSAGLVDEGEEQFQEIKASGILPSVMCYCMMLALYAKNDRLNDAYNLIDAMITMR 620
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 112/256 (43%), Gaps = 5/256 (1%)
Query: 56 NTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVF 115
N Y G + + ++IL H + + +I +G+AA++E A +F
Sbjct: 414 NMQTYEGLIFACGKGGLYEDAKKILLHMNEKGVVPSSKAYTGVIEAFGQAALYEEALVMF 473
Query: 116 DEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVD 175
+ M TV ++N+L+ A + E + + + ++ G++ D+ S+N +I+AF
Sbjct: 474 NTMNEVGSNPTVETYNSLIHAFARGGLYKEAEAILSRM-NESGLKRDVHSFNGVIEAFRQ 532
Query: 176 KGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRS 235
G + A EMEK + +T +L + S G + E+ ++ + + P+V
Sbjct: 533 GGQYEEAVKSYVEMEKANCEPNELTLEAVLSIYCSAGLVDEGEEQFQEIKASGILPSVMC 592
Query: 236 YNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG-FVNEGNLEEAKRWYNK- 293
Y L A + A L+ M + ++ +IKG F +E N + + ++K
Sbjct: 593 YCMMLALYAKNDRLNDAYNLIDAMITMRVSDIHQVIGQMIKGDFDDESNWQIVEYVFDKL 652
Query: 294 --SGCGMNKAIFKLLV 307
GCG+ + L+
Sbjct: 653 NSEGCGLGMRFYNALL 668
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 118/293 (40%), Gaps = 38/293 (12%)
Query: 33 KENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKE 92
+E L + + F + G RT YT + +F E+L KQ + +S
Sbjct: 146 REGLLDKCREVFDEMPSNGVVRTVYS-YTAIINAYGRNGQFHASLELLNGMKQER-VSPS 203
Query: 93 GFTARLI--ALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLF 150
T + A +E +F EM + V+++N LLGAC + DE + +F
Sbjct: 204 ILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVF 263
Query: 151 KDLPH------------------KL----------------GIEPDLVSYNTIIKAFVDK 176
+ + KL G PD+ SYN +++A+ +
Sbjct: 264 RTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMECGGNLPDITSYNVLLEAYAEL 323
Query: 177 GSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSY 236
GS+ A + +M+ G + T++ LL + +GR+ D ++ M N P+ +Y
Sbjct: 324 GSIKEAMGVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDLFLEMKVSNTDPDAGTY 383
Query: 237 NARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
N + K+ + L +M + + P++ T+ LI G E+AK+
Sbjct: 384 NILIQVFGEGGYFKEVVTLFHDMAEENVEPNMQTYEGLIFACGKGGLYEDAKK 436
>gi|297850744|ref|XP_002893253.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
lyrata]
gi|297339095|gb|EFH69512.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
lyrata]
Length = 1147
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 99/196 (50%), Gaps = 5/196 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K+ E AR+ +M T SFN L+ FDE G+ ++ +
Sbjct: 315 LINGFSKSGKMEEARRFHGDMQRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNA- 373
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
GI P +YN I+A + G +D A LL M D++++NTL+ G+ +F +A
Sbjct: 374 GIYPTTSTYNIYIRALCEFGRIDDARELLSSMAAP----DVVSYNTLMHGYIKMRKFVEA 429
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+++ + N+ P++ +YN +DGL + A L EM S+ I PDV T+ L+KG
Sbjct: 430 SLLFDDLKAGNINPSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKG 489
Query: 278 FVNEGNLEEAKRWYNK 293
FV GNL A Y++
Sbjct: 490 FVKNGNLSMATEIYDE 505
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 108/221 (48%), Gaps = 8/221 (3%)
Query: 105 AAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLV 164
+ M A++V++ M TV++FN +L +C + + VD ++ ++ + IE V
Sbjct: 252 SRMMNKAQEVYETMVMHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRR-NIEFSEV 310
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
+YN +I F G ++ A +M++ G + +FN L+ G+ G F +A + + M
Sbjct: 311 TYNILINGFSKSGKMEEARRFHGDMQRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEM 370
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
+N + P +YN + L + A EL+ M + PDV ++ L+ G++
Sbjct: 371 LNAGIYPTTSTYNIYIRALCEFGRIDDARELLSSMAA----PDVVSYNTLMHGYIKMRKF 426
Query: 285 EEAKRWYNKSGCG-MNKAI--FKLLVPFVCEKGDLDFAFNL 322
EA ++ G +N +I + L+ +CE G+L+ A L
Sbjct: 427 VEASLLFDDLKAGNINPSIVTYNTLIDGLCESGNLEGAQRL 467
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 82/160 (51%), Gaps = 6/160 (3%)
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
PDL YN I G+L+ A ++ + G+ D +T+ T++ G+ GRF A +
Sbjct: 549 PDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDL 608
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
++ M++ + P+V +Y + G A + ++A + EM+ + + P+V T AL+ G
Sbjct: 609 YDEMLSKRLSPSVITYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLHGMCK 668
Query: 281 EGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLD 317
GN++EA R+ K G NK + +L+ C DLD
Sbjct: 669 AGNIDEAYRYLCKMEEEGISPNKYSYTILISKHC---DLD 705
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 68/136 (50%)
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
++G+ PD V+Y T+I+ +++KG A L EM K + +IT+ L+ G GR
Sbjct: 579 RVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPSVITYFVLIHGHAKAGRLE 638
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
A + M VRPNV ++NA L G+ +A + +M + I+P+ +++ LI
Sbjct: 639 QAFQYSTEMKKRGVRPNVMTHNALLHGMCKAGNIDEAYRYLCKMEEEGISPNKYSYTILI 698
Query: 276 KGFVNEGNLEEAKRWY 291
+ EE + Y
Sbjct: 699 SKHCDLDKWEEVVKLY 714
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 78/168 (46%), Gaps = 3/168 (1%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G P + + N +++ D ++ A + M GI +ITFNT+L + G
Sbjct: 234 GFLPSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPTVITFNTMLDSCFKAGDLERV 293
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+KIW M N+ + +YN ++G + + ++A G+M+ ++F LI+G
Sbjct: 294 DKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHGDMQRSGFPVTPYSFNPLIEG 353
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
+ +G +EA ++ +G + + + + +CE G +D A L
Sbjct: 354 YCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRIDDAREL 401
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 83/186 (44%), Gaps = 3/186 (1%)
Query: 188 EMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEK 247
+M +KG + N +L + A++++ETMV + P V ++N LD
Sbjct: 229 KMIRKGFLPSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPTVITFNTMLDSCFKAG 288
Query: 248 QTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNKAIFK 304
++ ++ EM+ + I T+ LI GF G +EEA+R++ +SG + F
Sbjct: 289 DLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHGDMQRSGFPVTPYSFN 348
Query: 305 LLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKTN 364
L+ C++G D A+ + + + + + L + R+++A+EL+
Sbjct: 349 PLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRIDDARELLSSMAAP 408
Query: 365 SYCRYN 370
YN
Sbjct: 409 DVVSYN 414
>gi|410109901|gb|AFV61030.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
microcephala]
Length = 431
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 153/334 (45%), Gaps = 30/334 (8%)
Query: 66 RLANAKRFRWI-----EEILEHQKQ----------YKDISKEGFTARL------IALYGK 104
RL +F W+ ++LEH + Y++I + G+ A L + + K
Sbjct: 96 RLTREHKF-WVPIDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCK 154
Query: 105 AAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLV 164
A+ VFD + +V+S+N L+ + DE L K G++PD+
Sbjct: 155 DGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL-KSAMLASGVQPDVY 213
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
+Y+ +I + +D AN L EM KG+ + +TF TL+ G NGR A +I++ M
Sbjct: 214 TYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 273
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
++ ++ P++ +YN + GL + K+A L+ EM K + PD T+ LI G EG+L
Sbjct: 274 LSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDL 333
Query: 285 EEA---KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLV 341
+ A ++ + +++ + L+ +C++G A + + S D ++
Sbjct: 334 DSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMI 393
Query: 342 VDRLAKELRVEEA----KELVELGKTNSYCRYNL 371
++ K+ V + KE+ G S YN+
Sbjct: 394 INEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNV 427
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 89/180 (49%), Gaps = 1/180 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K + A +++ +M ++ ++++N L+ + L ++ K
Sbjct: 253 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVK- 311
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD ++Y T+I +G LDSA M ++ IRLD + + L+ G GR DA
Sbjct: 312 GLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDA 371
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
EK+ M+++ ++P+ R+Y ++ + K +L+ EM+ P V T+ L+ G
Sbjct: 372 EKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
>gi|449449679|ref|XP_004142592.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08610-like [Cucumis sativus]
gi|449516715|ref|XP_004165392.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08610-like [Cucumis sativus]
Length = 594
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 117/263 (44%), Gaps = 4/263 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI L K FE+A V D + +++N LL + +DEVD + K + L
Sbjct: 318 LINLTCKQGKFEDAALVIDNLLFHGMVPDAVTYNTLLHSLSRRGHWDEVDEILKIMSISL 377
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
P +V+ N +I G LDSA L +M D+IT+NTLL G +A
Sbjct: 378 Q-PPTVVTCNVLINGLCKNGLLDSAINFLNQMFSYNCLPDIITYNTLLGALCKEGMVDEA 436
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ + + P + SYN LDGL+ + KA+ L +M I PD T ++I G
Sbjct: 437 FQLLHLLTDTACSPGLISYNTVLDGLSRKGYMDKAMSLYSQMMENGIIPDDTTHRSIIWG 496
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
F EA K G +N + +++LV +C +D A + + S C +
Sbjct: 497 FCRSNKFVEAVETLKGILKGGYEVNSSFYRILVHELCLNKKVDLAIQVLEMMLSSPCKSN 556
Query: 335 QAPLQLVVDRLAKELRVEEAKEL 357
+ +++ +A E+A EL
Sbjct: 557 ETIYSTIINSIASAGLKEQADEL 579
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 130/299 (43%), Gaps = 40/299 (13%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A +V D M RN ++ VN+ + D+ + K + G+ PD+++YN +I
Sbjct: 156 ASRVVDIMASRNQIPDFECCINMIRGFVNTDRMDKAVQVLKIMVMSGGV-PDIITYNMVI 214
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
+G L+SA LL +M G D+IT+N ++ + NG F A + W+ +
Sbjct: 215 GCLCKQGHLESAIELLNDMSLSGCPPDVITYNAVIRHMFDNGCFDQAVEFWKEQLRKGTP 274
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR- 289
P + +Y ++ + + T ALE++ EM ++ PD+ T+ +LI +G E+A
Sbjct: 275 PYLITYTILIELVWKHRGTVCALEVLEEMANEGCYPDLVTYNSLINLTCKQGKFEDAALV 334
Query: 290 --------------WYNKSGCGMNK--------AIFKL---------------LVPFVCE 312
YN +++ I K+ L+ +C+
Sbjct: 335 IDNLLFHGMVPDAVTYNTLLHSLSRRGHWDEVDEILKIMSISLQPPTVVTCNVLINGLCK 394
Query: 313 KGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKTNSYCRYNL 371
G LD A N + FS CL D ++ L KE V+EA +L+ L T++ C L
Sbjct: 395 NGLLDSAINFLNQMFSYNCLPDIITYNTLLGALCKEGMVDEAFQLLHL-LTDTACSPGL 452
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 118/263 (44%), Gaps = 4/263 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I K E+A ++ ++M C V+++NA++ ++ FD+ +K+ K
Sbjct: 213 VIGCLCKQGHLESAIELLNDMSLSGCPPDVITYNAVIRHMFDNGCFDQAVEFWKEQLRK- 271
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G P L++Y +I+ A +L EM +G DL+T+N+L+ G+F DA
Sbjct: 272 GTPPYLITYTILIELVWKHRGTVCALEVLEEMANEGCYPDLVTYNSLINLTCKQGKFEDA 331
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ + ++ + P+ +YN L L+ + E++ M P V T LI G
Sbjct: 332 ALVIDNLLFHGMVPDAVTYNTLLHSLSRRGHWDEVDEILKIMSISLQPPTVVTCNVLING 391
Query: 278 FVNEGNLEEAKRWYNKS---GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
G L+ A + N+ C + + L+ +C++G +D AF L C
Sbjct: 392 LCKNGLLDSAINFLNQMFSYNCLPDIITYNTLLGALCKEGMVDEAFQLLHLLTDTACSPG 451
Query: 335 QAPLQLVVDRLAKELRVEEAKEL 357
V+D L+++ +++A L
Sbjct: 452 LISYNTVLDGLSRKGYMDKAMSL 474
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 87/196 (44%), Gaps = 3/196 (1%)
Query: 167 NTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVN 226
N I++ F KG L A+ ++ M + D ++ GF + R A ++ + MV
Sbjct: 141 NVILQKFCYKGKLMEASRVVDIMASRNQIPDFECCINMIRGFVNTDRMDKAVQVLKIMVM 200
Query: 227 MNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEE 286
P++ +YN + L + + A+EL+ +M PDV T+ A+I+ + G ++
Sbjct: 201 SGGVPDIITYNMVIGCLCKQGHLESAIELLNDMSLSGCPPDVITYNAVIRHMFDNGCFDQ 260
Query: 287 AKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVD 343
A ++ + G + +L+ V + A + + +E C D +++
Sbjct: 261 AVEFWKEQLRKGTPPYLITYTILIELVWKHRGTVCALEVLEEMANEGCYPDLVTYNSLIN 320
Query: 344 RLAKELRVEEAKELVE 359
K+ + E+A +++
Sbjct: 321 LTCKQGKFEDAALVID 336
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 53/123 (43%), Gaps = 3/123 (2%)
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
T N +L F G+ +A ++ + M + N P+ + G + KA++++ M
Sbjct: 139 TNNVILQKFCYKGKLMEASRVVDIMASRNQIPDFECCINMIRGFVNTDRMDKAVQVLKIM 198
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDL 316
PD+ T+ +I +G+LE A N SGC + + ++ + + G
Sbjct: 199 VMSGGVPDIITYNMVIGCLCKQGHLESAIELLNDMSLSGCPPDVITYNAVIRHMFDNGCF 258
Query: 317 DFA 319
D A
Sbjct: 259 DQA 261
>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
Length = 1245
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 128/284 (45%), Gaps = 39/284 (13%)
Query: 114 VFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAF 173
+ D M C+ V+++N+++ S L + + + ++ D+ +Y+TII +
Sbjct: 170 LVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEER-NVKADVFTYSTIIDSL 228
Query: 174 VDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNV 233
G +D+A +L EME KGI+ ++T+N+L+ G G++ D + + MV+ + PNV
Sbjct: 229 CRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNV 288
Query: 234 RSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK----- 288
++N LD E + ++A EL EM ++ I+P++ T+ L+ G+ + L EA
Sbjct: 289 ITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDL 348
Query: 289 ---------------------------------RWYNKSGCGMNKAIFKLLVPFVCEKGD 315
R +K G N + +LV C+ G
Sbjct: 349 MVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGK 408
Query: 316 LDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ A L + S L D +++D L ++E+A E+ E
Sbjct: 409 IKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFE 452
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 117/225 (52%), Gaps = 4/225 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+ ++ K + A +++ EM R ++++N L+ + E + + DL +
Sbjct: 294 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML-DLMVRN 352
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
PD+V++ ++IK + +D + + K+G+ + +T++ L+ GF +G+ A
Sbjct: 353 KCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLA 412
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
E++++ MV+ V P+V +Y LDGL + +KALE+ +++ +++ + + +I+G
Sbjct: 413 EELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEG 472
Query: 278 FVNEGNLEEAKRWYNKSGC-GM--NKAIFKLLVPFVCEKGDLDFA 319
G +E+A + C G+ N + +++ +C+KG L A
Sbjct: 473 MCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEA 517
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 127/269 (47%), Gaps = 8/269 (2%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
++A +F EM +++ F+ A +K+F+ V K L GI ++ + N
Sbjct: 60 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELN-GIAHNIYTLNI 118
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
+I F A ++L ++ K G D TFNTL+ G + G+ ++A + + MV
Sbjct: 119 MINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENG 178
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
+P+V +YN+ ++G+ T AL+L+ +M + + DVFT+ +I +G ++ A
Sbjct: 179 CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 238
Query: 289 RWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRL 345
+ + G + + LV +C+ G + L K S + + +++D
Sbjct: 239 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 298
Query: 346 AKELRVEEA----KELVELGKTNSYCRYN 370
KE +++EA KE++ G + + YN
Sbjct: 299 VKEGKLQEANELYKEMITRGISPNIITYN 327
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 91/217 (41%), Gaps = 38/217 (17%)
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
KLG EPD ++NT+IK +G + A L+ M + G + D++T+N+++ G +G +
Sbjct: 141 KLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTS 200
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMR--------------- 260
A + M NV+ +V +Y+ +D L + A+ L EM
Sbjct: 201 LALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 260
Query: 261 --------------------SKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCG 297
S+EI P+V TF L+ FV EG L+EA Y + G
Sbjct: 261 RGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGIS 320
Query: 298 MNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
N + L+ C + L A N+ +C D
Sbjct: 321 PNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPD 357
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 97/205 (47%), Gaps = 3/205 (1%)
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
FT+ LI Y ++ KVF + R ++++ L+ S K + LF+++
Sbjct: 361 FTS-LIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM 419
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
G+ PD+++Y ++ D G L+ A + +++K + L ++ + T++ G G+
Sbjct: 420 VSH-GVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGK 478
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
DA ++ ++ V+PNV +Y + GL + +A L+ +M P+ T+
Sbjct: 479 VEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNT 538
Query: 274 LIKGFVNEGNL-EEAKRWYNKSGCG 297
LI+ + +G+L AK CG
Sbjct: 539 LIRAHLRDGDLTASAKLIEEMKSCG 563
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 94/212 (44%), Gaps = 9/212 (4%)
Query: 37 LKRLVDKFKKSSDLGR--FRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY---KDISK 91
+KR+ D K ++ + N Y+ VQ + + + EE+ + + D+
Sbjct: 371 VKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMT 430
Query: 92 EGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFK 151
G + GK E A ++F+++ + ++ + ++ K ++ LF
Sbjct: 431 YGILLDGLCDNGK---LEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFC 487
Query: 152 DLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSN 211
LP K G++P++++Y +I KGSL AN LL +ME+ G + T+NTL+ +
Sbjct: 488 SLPCK-GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRD 546
Query: 212 GRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
G + K+ E M + + S +D L
Sbjct: 547 GDLTASAKLIEEMKSCGFSADASSIKMVIDML 578
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 97/211 (45%), Gaps = 7/211 (3%)
Query: 71 KRFRWIEEILEHQKQYKDISKEGFTAR------LIALYGKAAMFENARKVFDEMPGRNCE 124
K + ++ + + K +++ISK G A L+ + ++ + A ++F EM
Sbjct: 366 KGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL 425
Query: 125 QTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANT 184
V+++ LL ++ K ++ +F+DL K ++ +V Y TII+ G ++ A
Sbjct: 426 PDVMTYGILLDGLCDNGKLEKALEIFEDL-QKSKMDLGIVMYTTIIEGMCKGGKVEDAWN 484
Query: 185 LLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLA 244
L + KG++ +++T+ ++ G G ++A + M PN +YN +
Sbjct: 485 LFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHL 544
Query: 245 IEKQTKKALELVGEMRSKEINPDVFTFYALI 275
+ + +L+ EM+S + D + +I
Sbjct: 545 RDGDLTASAKLIEEMKSCGFSADASSIKMVI 575
>gi|410109913|gb|AFV61036.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
aristata]
Length = 431
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 153/334 (45%), Gaps = 30/334 (8%)
Query: 66 RLANAKRFRWI-----EEILEHQKQ----------YKDISKEGFTARL------IALYGK 104
RL +F W+ ++LEH + Y++I + G+ A L + + K
Sbjct: 96 RLTREHKF-WVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCK 154
Query: 105 AAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLV 164
A+ VFD + +V+S+N L+ + DE L K G++PD+
Sbjct: 155 DGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL-KSAMLASGVQPDVY 213
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
+Y+ +I + +D AN L EM KG+ + +TF TL+ G NGR A +I++ M
Sbjct: 214 TYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 273
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
++ ++ P++ +YN + GL + K+A L+ EM K + PD T+ LI G EG+L
Sbjct: 274 LSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDL 333
Query: 285 EEA---KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLV 341
+ A ++ + +++ + L+ +C++G A + + S D ++
Sbjct: 334 DSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMI 393
Query: 342 VDRLAKELRVEEA----KELVELGKTNSYCRYNL 371
++ K+ V + KE+ G S YN+
Sbjct: 394 INEFCKKGDVWKGXKLLKEMQRDGHVPSVVTYNV 427
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 89/180 (49%), Gaps = 1/180 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K + A +++ +M ++ ++++N L+ + L ++ K
Sbjct: 253 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVK- 311
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD ++Y T+I +G LDSA M ++ IRLD + + L+ G GR DA
Sbjct: 312 GLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDA 371
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
EK+ M+++ ++P+ R+Y ++ + K +L+ EM+ P V T+ L+ G
Sbjct: 372 EKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGXKLLKEMQRDGHVPSVVTYNVLMNG 431
>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 657
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 135/286 (47%), Gaps = 12/286 (4%)
Query: 84 KQYKDISKEGFTARLIAL------YGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GA 136
K YK++ GFT + Y K ENA +F M N T + ++ G
Sbjct: 305 KVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGL 364
Query: 137 CVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRL 196
C + F+ D LF + G P + YNTII F+ +G+++ A+ + EM + GI
Sbjct: 365 CKAGRSFEGRD-LFNKFVSQ-GFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITP 422
Query: 197 DLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELV 256
+T+ +L+ GF A K+ M ++ ++++Y +DG + K A EL+
Sbjct: 423 STVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELL 482
Query: 257 GEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEK 313
E+R ++P+ F + ++I GF N N+EEA Y K G + + L+ + +
Sbjct: 483 NELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKS 542
Query: 314 GDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
G L +A ++ S+ L D ++++ L + + E A++++E
Sbjct: 543 GRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILE 588
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 124/282 (43%), Gaps = 11/282 (3%)
Query: 86 YKDISKEGFTARLIAL------YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
Y ++ +G + + +L Y K ++NA +F++ V +FN LL
Sbjct: 203 YSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLAN-VFTFNTLLSWLCK 261
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
K +E L+ ++ K GI P++VSYN II K ++++A + EM G + +
Sbjct: 262 EGKMNEACNLWDEVIAK-GISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAV 320
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
TF L+ G++ G +A I+ M + N+ P + + GL ++ + +L +
Sbjct: 321 TFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKF 380
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS---GCGMNKAIFKLLVPFVCEKGDL 316
S+ P + +I GF+ EGN+ A Y + G + + L+ C+ ++
Sbjct: 381 VSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNI 440
Query: 317 DFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
D A L + +D ++D K ++ A EL+
Sbjct: 441 DLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELL 482
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 104/214 (48%), Gaps = 7/214 (3%)
Query: 86 YKDISKEGFT------ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
Y+++ + G T LI + K + A K+ ++M + + + ++ L+
Sbjct: 412 YREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCK 471
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
+ L +L G+ P+ YN++I F + +++ A L +M +GI DL
Sbjct: 472 RRDMKSAHELLNEL-RGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLK 530
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
T+ +L+ G +GR A I M++ + P+ R++ ++GL + Q + A +++ +M
Sbjct: 531 TYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDM 590
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK 293
K + P V + LI G EGNL+EA R +++
Sbjct: 591 NGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDE 624
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 118/262 (45%), Gaps = 9/262 (3%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I G KE N+ + +++ ++G +T YT + ++L K+
Sbjct: 394 TIIDGFIKEGNINLASNVYREMCEVG-ITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKR 452
Query: 86 Y---KDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKK 142
DI G LI + K ++A ++ +E+ G +N+++ N
Sbjct: 453 KGLKMDIKAYG---TLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNN 509
Query: 143 FDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFN 202
+E L+K + ++ GI DL +Y ++I + G L A+ + EM KGI D
Sbjct: 510 VEEAIDLYKKMVNE-GIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHT 568
Query: 203 TLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
L+ G + G+F +A KI E M N+ P+V YN + G E ++A L EM +
Sbjct: 569 VLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDR 628
Query: 263 EINPDVFTFYALIKG-FVNEGN 283
+ PD T+ L+ G F +GN
Sbjct: 629 GLVPDNITYDILVNGKFKGDGN 650
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 115/266 (43%), Gaps = 38/266 (14%)
Query: 129 SFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
+F +++ ACV E L D+ + G +L +++K + +G+L SA L+ E
Sbjct: 112 TFTSVITACVKEGNVAEALRLKDDMVN-CGKSMNLAVATSLMKGYCMQGNLRSALVLVNE 170
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDG------ 242
+ + G+ + +T++ L+ G NG A + + M +R +V S N+ L+G
Sbjct: 171 ISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQS 230
Query: 243 ----------------------------LAIEKQTKKALELVGEMRSKEINPDVFTFYAL 274
L E + +A L E+ +K I+P+V ++ +
Sbjct: 231 WQNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNI 290
Query: 275 IKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERC 331
I G + N+ A + Y + +G N F +L+ +KGD++ AF++ R
Sbjct: 291 ILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANI 350
Query: 332 LVDQAPLQLVVDRLAKELRVEEAKEL 357
L L +++ L K R E ++L
Sbjct: 351 LPTDTTLGIIIKGLCKAGRSFEGRDL 376
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 89/208 (42%), Gaps = 3/208 (1%)
Query: 159 IEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAE 218
+ P + N ++ A V K A L +M G+ D T + +L G +AE
Sbjct: 1 MTPSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAE 60
Query: 219 KIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGF 278
+ + V + +Y+ + L ++ + AL L+ EMR+ P TF ++I
Sbjct: 61 QHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITAC 120
Query: 279 VNEGNLEEAKRWYNKS-GCG--MNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQ 335
V EGN+ EA R + CG MN A+ L+ C +G+L A L + ++
Sbjct: 121 VKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNK 180
Query: 336 APLQLVVDRLAKELRVEEAKELVELGKT 363
+++D K +E+A E KT
Sbjct: 181 VTYSVLIDGCCKNGNIEKAFEFYSEMKT 208
>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 130/299 (43%), Gaps = 39/299 (13%)
Query: 99 IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLG 158
I + G+A + A ++F M C ++++ L+ A N+ + + LF + G
Sbjct: 269 IRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKAN-G 327
Query: 159 IEPDLVSYNTIIKAFVDKGSLDSANTLLYEME---------------------------- 190
+PD V Y T++ F D G LD+ +ME
Sbjct: 328 HKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAF 387
Query: 191 -------KKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
K+GI +L T+NTL+ G GR DA K+ TM ++ V+P +YN +D
Sbjct: 388 ATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYF 447
Query: 244 AIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNK 300
+T KA+E +M++K I P++ A + G L EAK +N ++G +
Sbjct: 448 GKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDS 507
Query: 301 AIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ +++ + G +D A NL C D + ++D L K RV+EA ++ +
Sbjct: 508 VTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFD 566
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 100/195 (51%), Gaps = 1/195 (0%)
Query: 99 IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLG 158
I +GK+ A + F++M + +++ NA L + + E +F L G
Sbjct: 444 IDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLREN-G 502
Query: 159 IEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAE 218
+ PD V+YN ++K + G +D A LL EM + G D+I N+L+ Y GR +A
Sbjct: 503 LAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAW 562
Query: 219 KIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGF 278
++++ M +M + P V +YN L GL E + +KA+EL M K+ +P+ +F L+ F
Sbjct: 563 QMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCF 622
Query: 279 VNEGNLEEAKRWYNK 293
+E A + ++K
Sbjct: 623 CKNDEVELALKMFSK 637
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 106/229 (46%), Gaps = 7/229 (3%)
Query: 149 LFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
+F KLGI P L SYN +I ++ + A L +M+ G D TFN LL
Sbjct: 774 IFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVH 833
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDV 268
+G+ + ++++ M++ +P+ +YN + LA KAL+ ++ S + P
Sbjct: 834 GKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTP 893
Query: 269 FTFYALIKGFVNEGNLEEAKRWYNKS---GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKR 325
T+ LI G G LEEA R + + GC N AIF +L+ + GD + A L KR
Sbjct: 894 RTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKR 953
Query: 326 TFSERCLVDQAPLQLVVDRLAKELRVEEA----KELVELGKTNSYCRYN 370
+E D ++VD L RV+EA EL G + YN
Sbjct: 954 MVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYN 1002
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 94/196 (47%), Gaps = 1/196 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+A++GK+ +++ EM R C+ +++N ++ + S D+ F DL
Sbjct: 829 LLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSS- 887
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
P +Y +I G L+ A L EM G + + FN L+ G+ G A
Sbjct: 888 DFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETA 947
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++++ MVN +RP+++SY +D L + + +AL E++S ++PD + +I G
Sbjct: 948 CQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIING 1007
Query: 278 FVNEGNLEEAKRWYNK 293
+EEA YN+
Sbjct: 1008 LGKSQRMEEALALYNE 1023
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 108/250 (43%), Gaps = 6/250 (2%)
Query: 27 VIRGIYKENNLKRLVDKFKK--SSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQK 84
VI + K NNL + +D F SSD FR Y + LA R + E
Sbjct: 864 VISSLAKSNNLDKALDFFYDLVSSD---FRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMS 920
Query: 85 QYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
Y LI YGK E A ++F M + S+ L+ + + D
Sbjct: 921 DYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVD 980
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
E F +L G++PD ++YN II ++ A L EM +GI DL T+N+L
Sbjct: 981 EALYYFNELKST-GLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSL 1039
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+L G A++++E + + P+V +YNA + G ++ + + A + M
Sbjct: 1040 MLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGC 1099
Query: 265 NPDVFTFYAL 274
NP++ T+ L
Sbjct: 1100 NPNIGTYAQL 1109
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 97/212 (45%), Gaps = 4/212 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI K E A ++F+EM C+ FN L+ + LFK + ++
Sbjct: 899 LIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNE- 957
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
GI PDL SY ++ G +D A E++ G+ D I +N ++ G + R +A
Sbjct: 958 GIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEA 1017
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ M N + P++ +YN+ + L + ++A + E++ + PDVFT+ ALI+G
Sbjct: 1018 LALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRG 1077
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLL 306
+ N E A Y GC N + L
Sbjct: 1078 YSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 97/181 (53%), Gaps = 4/181 (2%)
Query: 142 KFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITF 201
K +++ +F+ + K+ I DL +Y TI KA +G L T+L +M K G L+ ++
Sbjct: 137 KVEDMAAVFEFMQKKI-IRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSY 195
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS 261
N L+ +G +A +++ MV+ ++P++++Y+A + L ++ ++ + L+ EM
Sbjct: 196 NGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMED 255
Query: 262 KEINPDVFTFYALIKGFVNEGNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDF 318
+ P+V+TF I+ G ++EA R + GCG + + +L+ +C G L+
Sbjct: 256 LGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLEN 315
Query: 319 A 319
A
Sbjct: 316 A 316
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 88/185 (47%), Gaps = 1/185 (0%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
E A +F +M C +FN LL S K E+ L+K++ + +PD ++YN
Sbjct: 805 EKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISR-RCKPDAITYNI 863
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
+I + +LD A Y++ R T+ L+ G GR +A +++E M +
Sbjct: 864 VISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYG 923
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
+PN +N ++G T+ A +L M ++ I PD+ ++ L+ G ++EA
Sbjct: 924 CKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEAL 983
Query: 289 RWYNK 293
++N+
Sbjct: 984 YYFNE 988
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 138/318 (43%), Gaps = 21/318 (6%)
Query: 52 RFRTNTGIYT----GTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAM 107
RFR N + GT+ K + EE++ + +D F L+ + K
Sbjct: 712 RFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICRED----SFLIPLVRVLCKHKR 767
Query: 108 FENARKVFDEMPGR-NCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSY 166
A ++FD+ + T+ S+N L+G + ++ LFKD+ + +G PD ++
Sbjct: 768 ELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKN-VGCAPDAFTF 826
Query: 167 NTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVN 226
N ++ G + L EM + + D IT+N ++ + A + +V+
Sbjct: 827 NMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVS 886
Query: 227 MNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEE 286
+ RP R+Y +DGLA + ++A+ L EM P+ F LI G+ G+ E
Sbjct: 887 SDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTET 946
Query: 287 A----KRWYNKSGCGMNKAIFKLLVPFVCEKGDLD---FAFNLCKRTFSERCLVDQAPLQ 339
A KR N+ G + + +LV +C G +D + FN K T + D
Sbjct: 947 ACQLFKRMVNE-GIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDP---DFIAYN 1002
Query: 340 LVVDRLAKELRVEEAKEL 357
+++ L K R+EEA L
Sbjct: 1003 RIINGLGKSQRMEEALAL 1020
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 109/233 (46%), Gaps = 4/233 (1%)
Query: 129 SFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
S+N L+ + S E +++ + + G++P L +Y+ ++ A K + LL E
Sbjct: 194 SYNGLIHLLIQSGFCGEALEVYRRMVSE-GLKPSLKTYSALMVALGKKRDSEMVMVLLKE 252
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
ME G+R ++ TF + G+ +A +I+ M + P++ +Y +D L Q
Sbjct: 253 MEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQ 312
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKL 305
+ A EL +M++ PD + L+ F + G+L+ K ++++ G + F +
Sbjct: 313 LENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTI 372
Query: 306 LVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
LV +C+ D D AF + L + ++ L + R+E+A +L+
Sbjct: 373 LVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLL 425
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/295 (19%), Positives = 116/295 (39%), Gaps = 39/295 (13%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+ + KA F+ A FD M + + ++N L+ + + + ++ L + +
Sbjct: 373 LVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTM-ESV 431
Query: 158 GIEPDLVSYNTIIKAF-----------------------------------VDKGSLDSA 182
G++P +YN I F + G L A
Sbjct: 432 GVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREA 491
Query: 183 NTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDG 242
T+ + + G+ D +T+N ++ + G+ +A + M+ P+V N+ +D
Sbjct: 492 KTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDS 551
Query: 243 LAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMN 299
L + +A ++ M+ +++P V T+ L+ G EG +++A + + C N
Sbjct: 552 LYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPN 611
Query: 300 KAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA 354
F L+ C+ +++ A + + C D V+ L KE +V A
Sbjct: 612 TISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHA 666
>gi|356562783|ref|XP_003549648.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 859
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 136/295 (46%), Gaps = 13/295 (4%)
Query: 28 IRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYK 87
I + ++ R +D FK L F ++ QR + R + + Q+Q
Sbjct: 78 ITALPPRGSIARCLDPFKNKLSLNDFAL---VFKEFAQRGDWQRSLRLFKYM---QRQIW 131
Query: 88 DISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVD 147
E +I L G+ + + R+VFDEMP +TV + A++ A + +F
Sbjct: 132 CKPNEHIYTIMITLLGREGLLDKCREVFDEMPSNGVARTVYVYTAVINAYGRNGQFHASL 191
Query: 148 GLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANT--LLYEMEKKGIRLDLITFNTLL 205
L + + + P +++YNT+I A +G LD L EM +GI+ D+IT+NTLL
Sbjct: 192 ELLNGMKQER-VSPSILTYNTVINACA-RGGLDWEGLLGLFAEMRHEGIQPDVITYNTLL 249
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEIN 265
G +AE ++ TM + P++ +Y+ + + +K EL+ EM S
Sbjct: 250 GACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMESGGNL 309
Query: 266 PDVFTFYALIKGFVNEGNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKGDLD 317
PD+ ++ L++ + G+++EA R +GC N A + +L+ + G D
Sbjct: 310 PDITSYNVLLEAYAELGSIKEAMDVFRQMQAAGCVANAATYSVLLNLYGKHGRYD 364
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 103/223 (46%), Gaps = 4/223 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+ LYGK +++ R +F EM N + ++N L+ F EV LF D+ +
Sbjct: 353 LLNLYGKHGRYDDVRDIFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMVEE- 411
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
+EP++ +Y +I A G + A +L M +KGI + ++ F + +A
Sbjct: 412 NVEPNMETYEGLIFACGKGGLYEDAKKILLHMNEKGIVPSSKAYTGVIEAFGQAALYEEA 471
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ TM + P V +YN+ + A K+A ++ M + DV +F +IK
Sbjct: 472 LVVFNTMNEVGSNPTVETYNSFIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIKA 531
Query: 278 FVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLD 317
F G EEA + Y K+ C N+ ++++ C G +D
Sbjct: 532 FRQGGQYEEAVKSYVEMEKANCEPNELTLEVVLSVYCSAGLVD 574
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 113/256 (44%), Gaps = 5/256 (1%)
Query: 56 NTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVF 115
N Y G + + ++IL H + + +I +G+AA++E A VF
Sbjct: 416 NMETYEGLIFACGKGGLYEDAKKILLHMNEKGIVPSSKAYTGVIEAFGQAALYEEALVVF 475
Query: 116 DEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVD 175
+ M TV ++N+ + A + E + + + ++ G++ D+ S+N +IKAF
Sbjct: 476 NTMNEVGSNPTVETYNSFIHAFARGGLYKEAEAILSRM-NESGLKRDVHSFNGVIKAFRQ 534
Query: 176 KGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRS 235
G + A EMEK + +T +L + S G ++E+ ++ + + P+V
Sbjct: 535 GGQYEEAVKSYVEMEKANCEPNELTLEVVLSVYCSAGLVDESEEQFQEIKASGILPSVMC 594
Query: 236 YNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG-FVNEGNLEEAKRWYNK- 293
Y L A + A L+ EM + ++ +IKG F +E N + + ++K
Sbjct: 595 YCLMLALYAKNDRLNDAYNLIDEMITMRVSDIHQGIGQMIKGDFDDESNWQIVEYVFDKL 654
Query: 294 --SGCGMNKAIFKLLV 307
GCG+ + L+
Sbjct: 655 NSEGCGLGMRFYNALL 670
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 119/293 (40%), Gaps = 38/293 (12%)
Query: 33 KENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKE 92
+E L + + F + G RT +YT + +F E+L KQ + +S
Sbjct: 148 REGLLDKCREVFDEMPSNGVART-VYVYTAVINAYGRNGQFHASLELLNGMKQER-VSPS 205
Query: 93 GFTARLI--ALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLF 150
T + A +E +F EM + V+++N LLGAC + DE + +F
Sbjct: 206 ILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVF 265
Query: 151 KDLPH------------------KL----------------GIEPDLVSYNTIIKAFVDK 176
+ + KL G PD+ SYN +++A+ +
Sbjct: 266 RTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMESGGNLPDITSYNVLLEAYAEL 325
Query: 177 GSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSY 236
GS+ A + +M+ G + T++ LL + +GR+ D I+ M N P+ +Y
Sbjct: 326 GSIKEAMDVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDIFLEMKVSNTDPDAGTY 385
Query: 237 NARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
N + K+ + L +M + + P++ T+ LI G E+AK+
Sbjct: 386 NILIQVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLYEDAKK 438
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 77/195 (39%), Gaps = 1/195 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+ +GK E ++ EM + S+N LL A E +F+ +
Sbjct: 283 LVQTFGKLNRLEKVSELLREMESGGNLPDITSYNVLLEAYAELGSIKEAMDVFRQM-QAA 341
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G + +Y+ ++ + G D + EM+ D T+N L+ F G F +
Sbjct: 342 GCVANAATYSVLLNLYGKHGRYDDVRDIFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEV 401
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ MV NV PN+ +Y + + A +++ M K I P + +I+
Sbjct: 402 VTLFHDMVEENVEPNMETYEGLIFACGKGGLYEDAKKILLHMNEKGIVPSSKAYTGVIEA 461
Query: 278 FVNEGNLEEAKRWYN 292
F EEA +N
Sbjct: 462 FGQAALYEEALVVFN 476
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 94/213 (44%), Gaps = 4/213 (1%)
Query: 149 LFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
LFK + ++ +P+ Y +I +G LD + EM G+ + + ++ +
Sbjct: 122 LFKYMQRQIWCKPNEHIYTIMITLLGREGLLDKCREVFDEMPSNGVARTVYVYTAVINAY 181
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEK-QTKKALELVGEMRSKEINPD 267
NG+F + ++ M V P++ +YN ++ A + L L EMR + I PD
Sbjct: 182 GRNGQFHASLELLNGMKQERVSPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPD 241
Query: 268 VFTFYALIKGFVNEGNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCK 324
V T+ L+ + G +EA+ R N+SG + + LV + L+ L +
Sbjct: 242 VITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLR 301
Query: 325 RTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
S L D ++++ A+ ++EA ++
Sbjct: 302 EMESGGNLPDITSYNVLLEAYAELGSIKEAMDV 334
>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 763
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 154/366 (42%), Gaps = 41/366 (11%)
Query: 21 PKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEIL 80
PK + +VIR +++ +K L + F F+ Y +++L +F +EE+L
Sbjct: 7 PKHVTTVIRC--QKDPMKAL-EMFNSMRKEDGFKHTLSTYRSIIEKLGLYGKFEAMEEVL 63
Query: 81 EHQKQ-YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
+Q + EG + YG+ + A VF+ M +CE TV S+NA++ V+
Sbjct: 64 VDMRQNVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVD 123
Query: 140 SKKFDEVD---------GLFKDL---------------PHKL----------GIEPDLVS 165
S FD+ G+ D+ PH G E ++V+
Sbjct: 124 SGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVA 183
Query: 166 YNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMV 225
Y T++ F ++ D L +M G+ L L TFN LL G + EK+ + ++
Sbjct: 184 YCTVVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVI 243
Query: 226 NMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLE 285
V PN+ +YN + GL + + A+ +VG + + PDV T+ LI G +
Sbjct: 244 KRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQ 303
Query: 286 EAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVV 342
EA+ + K G + + L+ C+ G + A + + D+ + ++
Sbjct: 304 EAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLI 363
Query: 343 DRLAKE 348
D L E
Sbjct: 364 DGLCHE 369
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 139/313 (44%), Gaps = 29/313 (9%)
Query: 67 LANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKA--------------------- 105
L NA ++ + ++ + EG T R +AL+ +A
Sbjct: 344 LVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSN 403
Query: 106 -AMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLV 164
+ A ++ EM + V +FN L+ + DGL K + K G PD+
Sbjct: 404 QGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISK-GYFPDIF 462
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
++N +I + + +++A +L M G+ D+ T+N+LL G ++ D + ++TM
Sbjct: 463 TFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTM 522
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
V PN+ ++N L+ L + KAL L+ EM++K +NPD TF LI GF G+L
Sbjct: 523 VEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDL 582
Query: 285 EEAKRWYNKS----GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCL-VDQAPLQ 339
+ A + K + + +++ EK ++ A L + +RCL D +
Sbjct: 583 DGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQE-MVDRCLGPDGYTYR 641
Query: 340 LVVDRLAKELRVE 352
L+VD K V+
Sbjct: 642 LMVDGFCKTGNVD 654
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 123/272 (45%), Gaps = 4/272 (1%)
Query: 97 RLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHK 156
+L+ + K + K+ D++ R + ++N + + D + L +
Sbjct: 221 KLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQ 280
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
G +PD+V+YN +I A L ++ +G+ D T+NTL+ G+ G
Sbjct: 281 -GPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQL 339
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
AE+I V P+ +Y + +DGL E +T +AL L E K I P+V + LIK
Sbjct: 340 AERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIK 399
Query: 277 GFVNEGNLEEAKRW---YNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV 333
G N+G + EA + ++ G F +LV +C+ G + A L K S+
Sbjct: 400 GLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFP 459
Query: 334 DQAPLQLVVDRLAKELRVEEAKELVELGKTNS 365
D +++ + +L++E A E++++ N
Sbjct: 460 DIFTFNILIHGYSTQLKMENALEILDVMMDNG 491
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 9/206 (4%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K + +E+ + + M + C + +FN LL + K D+ GL +++ +K + PD
Sbjct: 508 KTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNK-SVNPDA 566
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEK-KGIRLDLITFNTLLLGFYSNGRFADAEKIWE 222
V++ T+I F G LD A TL +ME+ + T+N ++ F AEK+++
Sbjct: 567 VTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQ 626
Query: 223 TMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEG 282
MV+ + P+ +Y +DG + + EM P + T +I E
Sbjct: 627 EMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVE- 685
Query: 283 NLEEAKRWYNKSGCGMNKAIFKLLVP 308
R Y +G +++ + K LVP
Sbjct: 686 -----DRVYEAAGI-IHRMVQKGLVP 705
>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 588
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 101/199 (50%), Gaps = 4/199 (2%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A KVFD M ++C V+S+N L+ + D+ LF+++ + + P+ V+YNT+I
Sbjct: 334 AVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQ-ELTPNTVTYNTLI 392
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
G L A +L +EM +G DL+T+ TL N A + + + N
Sbjct: 393 HGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWD 452
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
P+++ Y LDG+ + + A +L + SK + P+V+T+ +I G +G L EA +
Sbjct: 453 PDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKL 512
Query: 291 Y---NKSGCGMNKAIFKLL 306
+ NK+GC N + L+
Sbjct: 513 FSEMNKNGCSPNDCTYNLI 531
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 147/335 (43%), Gaps = 5/335 (1%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++IRG+ E + + F K G F+ N Y + L +L +Q
Sbjct: 145 TLIRGLCVEGKIGEALHLFDKMIGEG-FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQ 203
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
+ LI K A +F EM + ++++N+L+ ++
Sbjct: 204 GNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKH 263
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
V L ++ I PD+ + NT++ A +G + A+ ++ M +G+ +++T+N L+
Sbjct: 264 VTTLMNEMVDS-KIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALM 322
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEIN 265
G A K+++TMV+ + NV SYN ++G + KA+ L EM +E+
Sbjct: 323 DGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELT 382
Query: 266 PDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
P+ T+ LI G + G L++A +++ G + ++ L ++C+ LD A L
Sbjct: 383 PNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMAL 442
Query: 323 CKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
K D ++D + + +E+A++L
Sbjct: 443 LKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDL 477
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 111/256 (43%), Gaps = 4/256 (1%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
+ A F+ M + + + FN LL + +K + L + + GI PD+ +
Sbjct: 51 LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM-DSFGIPPDVYTLA 109
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
+I + +D A + L ++ K G + D TF TL+ G G+ +A +++ M+
Sbjct: 110 IVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGE 169
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+PNV +Y ++GL T A+ L+ M P+V F LI + + EA
Sbjct: 170 GFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEA 229
Query: 288 KRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDR 344
+++ G N + L+ +C+ + L + + D L VVD
Sbjct: 230 FNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDA 289
Query: 345 LAKELRVEEAKELVEL 360
L KE V EA ++V++
Sbjct: 290 LCKEGMVAEAHDVVDM 305
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 83/213 (38%), Gaps = 7/213 (3%)
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
S+NT + +LD A + M K + FN LL + + M
Sbjct: 37 SHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM 96
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
+ + P+V + ++ L + A + ++ PD TF LI+G EG +
Sbjct: 97 DSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKI 156
Query: 285 EEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLV 341
EA ++K G N + L+ +C+ G+ A L + C + +
Sbjct: 157 GEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTL 216
Query: 342 VDRLAKELRVEEA----KELVELGKTNSYCRYN 370
+D L K+ +V EA E++ G + + YN
Sbjct: 217 IDSLCKDRQVTEAFNIFSEMITKGISPNIVTYN 249
>gi|224141281|ref|XP_002324003.1| predicted protein [Populus trichocarpa]
gi|222867005|gb|EEF04136.1| predicted protein [Populus trichocarpa]
Length = 626
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 135/267 (50%), Gaps = 8/267 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+ Y KA M + + F ++ +V++ N LL + S ++ ++ ++
Sbjct: 188 LLKAYVKAGMIKEGFRTFMQILEVGYVPSVIACNYLLNGLLKSNHIHLCWHVYGEMG-RV 246
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ P+ ++N + F G +D N L +ME++G D++T+NTL+ G+ GR +DA
Sbjct: 247 GVIPNSYTFNILTHLFCKDGDIDKMNDFLEKMEEEGFEPDIVTYNTLINGYCGRGRLSDA 306
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ M V P++ SY A ++GL E + ++A +L+ M + +NPDV ++ LI G
Sbjct: 307 FYLYRIMYRRCVLPDLVSYTALMNGLCKEGRVREAHQLLHRMVHRGLNPDVVSYNTLICG 366
Query: 278 FVNEGNLEEAKR-WYNKSGCGMNKAIF--KLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
+ EG + E+K Y G G+ F ++L+ ++G L A NL E+ V
Sbjct: 367 YCKEGKMLESKSLLYEMIGNGIFPDSFTCRVLIQGYRKEGWLISALNLVVEL--EKFGVS 424
Query: 335 QAP--LQLVVDRLAKELRVEEAKELVE 359
+P +V L +E R AK L+E
Sbjct: 425 ISPDIYDYLVASLCEEDRPFAAKTLLE 451
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 89/227 (39%), Gaps = 36/227 (15%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI Y +A ++ M R ++S+ AL+ + E L + H+
Sbjct: 293 LINGYCGRGRLSDAFYLYRIMYRRCVLPDLVSYTALMNGLCKEGRVREAHQLLHRMVHR- 351
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNG----- 212
G+ PD+VSYNT+I + +G + + +LLYEM GI D T L+ G+ G
Sbjct: 352 GLNPDVVSYNTLICGYCKEGKMLESKSLLYEMIGNGIFPDSFTCRVLIQGYRKEGWLISA 411
Query: 213 ------------------------------RFADAEKIWETMVNMNVRPNVRSYNARLDG 242
R A+ + E M P+V YN ++
Sbjct: 412 LNLVVELEKFGVSISPDIYDYLVASLCEEDRPFAAKTLLERMSQRGYIPHVEIYNKLIES 471
Query: 243 LAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
L AL L E+ INP++ T+ ALI+ G EA++
Sbjct: 472 LCKGDCVADALSLKAEIVVGNINPNLLTYKALIRCLCRMGRSIEAEK 518
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 115/288 (39%), Gaps = 41/288 (14%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTI 169
A ++ M R V+S+N L+ G C K + L++ + + GI PD + +
Sbjct: 341 AHQLLHRMVHRGLNPDVVSYNTLICGYCKEGKMLESKSLLYEMIGN--GIFPDSFTCRVL 398
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
I+ + +G L SA L+ E+EK G+ + ++ L+ R A+ + E M
Sbjct: 399 IQGYRKEGWLISALNLVVELEKFGVSISPDIYDYLVASLCEEDRPFAAKTLLERMSQRGY 458
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
P+V YN ++ L AL L E+ INP++ T+ ALI+ G EA++
Sbjct: 459 IPHVEIYNKLIESLCKGDCVADALSLKAEIVVGNINPNLLTYKALIRCLCRMGRSIEAEK 518
Query: 290 -----------------------WYNKSGCGMNKAIFKL---------------LVPFVC 311
+ + G +++ L LV VC
Sbjct: 519 LMEEMLHFGLQPDPEICRAMIHGYCREKDAGKAESLLVLFAKEFQIFDSESYSTLVRIVC 578
Query: 312 EKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
E GD+ L +R + + ++D L K + + + K ++E
Sbjct: 579 EDGDVAKFMELQERMLKVGFAPNSLTCKYMIDGLRKNVGLVKEKLILE 626
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 81/200 (40%), Gaps = 3/200 (1%)
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
D + ++ ++KA+V G + ++ + G +I N LL G + ++
Sbjct: 181 DPIIFDLLLKAYVKAGMIKEGFRTFMQILEVGYVPSVIACNYLLNGLLKSNHIHLCWHVY 240
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
M + V PN ++N + K + + +M + PD+ T+ LI G+
Sbjct: 241 GEMGRVGVIPNSYTFNILTHLFCKDGDIDKMNDFLEKMEEEGFEPDIVTYNTLINGYCGR 300
Query: 282 GNLEEAKRWYN--KSGCGMNKAI-FKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPL 338
G L +A Y C + + + L+ +C++G + A L R D
Sbjct: 301 GRLSDAFYLYRIMYRRCVLPDLVSYTALMNGLCKEGRVREAHQLLHRMVHRGLNPDVVSY 360
Query: 339 QLVVDRLAKELRVEEAKELV 358
++ KE ++ E+K L+
Sbjct: 361 NTLICGYCKEGKMLESKSLL 380
Score = 38.9 bits (89), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 87/219 (39%), Gaps = 6/219 (2%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTG--IYTGTVQRLANAKRFRWIEEILEHQK 84
+I+G KE L+ +L +F + IY V L R + +LE
Sbjct: 398 LIQGYRKEG---WLISALNLVVELEKFGVSISPDIYDYLVASLCEEDRPFAAKTLLERMS 454
Query: 85 QYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
Q I +LI K +A + E+ N +L++ AL+ +
Sbjct: 455 QRGYIPHVEIYNKLIESLCKGDCVADALSLKAEIVVGNINPNLLTYKALIRCLCRMGRSI 514
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
E + L +++ H G++PD +I + + A +LL K+ D +++TL
Sbjct: 515 EAEKLMEEMLH-FGLQPDPEICRAMIHGYCREKDAGKAESLLVLFAKEFQIFDSESYSTL 573
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
+ +G A ++ E M+ + PN + +DGL
Sbjct: 574 VRIVCEDGDVAKFMELQERMLKVGFAPNSLTCKYMIDGL 612
>gi|219885281|gb|ACL53015.1| unknown [Zea mays]
gi|414866677|tpg|DAA45234.1| TPA: hypothetical protein ZEAMMB73_414823 [Zea mays]
Length = 559
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 106/213 (49%), Gaps = 7/213 (3%)
Query: 113 KVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKA 172
KV D +P + TV +N +L A + LF+ +P + PD S+ T ++
Sbjct: 132 KVLDLLPRDDAALTVSDYNDILSALARAGDHATAVALFRAMP----VAPDAHSFATAVQC 187
Query: 173 FVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPN 232
+G+ D A L EM +G R + TF+ ++ GR A ++ + M + P
Sbjct: 188 LCRQGAPDEAKLALDEMVARGFRPSVATFSAVVGCLCKRGRVTKAMEVLDAMCGLGCEPT 247
Query: 233 VRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN 292
+R+YN+ + GL + ++ALEL+ +++ + PD++TF ++ GF G EEA ++
Sbjct: 248 IRTYNSLVGGLCYVGRLEEALELLKKLKDSPLTPDIYTFTIVLDGFCKVGRTEEATAIFH 307
Query: 293 KS-GCGMNKAIFK--LLVPFVCEKGDLDFAFNL 322
+ G G++ F L+ C++G+ AF L
Sbjct: 308 DAIGMGLSPTTFTYNALLNGHCKEGNPLKAFAL 340
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 82/223 (36%), Gaps = 12/223 (5%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A +V D M G CE T+ ++N+L+G + +E L K L + PD+ ++ ++
Sbjct: 232 AMEVLDAMCGLGCEPTIRTYNSLVGGLCYVGRLEEALELLKKLKDS-PLTPDIYTFTIVL 290
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN-- 228
F G + A + ++ G+ T+N LL G G A + M N
Sbjct: 291 DGFCKVGRTEEATAIFHDAIGMGLSPTTFTYNALLNGHCKEGNPLKAFALLMEMCGNNDA 350
Query: 229 -VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE------ 281
P+ S+ L L +T A + M D L +G
Sbjct: 351 ACLPDKTSFGIVLTALLRAGETSAAWQTYKRMERAGFEVDGRALDTLARGLCRRCATDAS 410
Query: 282 --GNLEEAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
G+ EE SG + L+ + G++D A L
Sbjct: 411 ALGDAEEVFAKVVASGHEPVSYTYCLMAQALARGGEVDAAVAL 453
>gi|125563733|gb|EAZ09113.1| hypothetical protein OsI_31378 [Oryza sativa Indica Group]
Length = 618
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 110/218 (50%), Gaps = 4/218 (1%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A +V+D+M R + V+++ ++ A + +GLF ++ + G+ P+L +YN ++
Sbjct: 192 AWEVWDQMVARRIDPNVVTYTTMIYALCEEDCIGDAEGLFLEM-KEAGMRPNLYTYNALM 250
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
+ + ++ A Y++ K G+ + + F TL+ G R +A+ I+ M V
Sbjct: 251 SSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCKANRITEAKNIFLDMPRYEVA 310
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
P V YN+ + G ++AL E+ KE+ PD FT +++G + G ++ A R+
Sbjct: 311 PTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKELRPDEFTCSIVVRGLCDGGQMQVATRF 370
Query: 291 ---YNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKR 325
+SG +N A + +L+ C+ G+LD A C R
Sbjct: 371 LEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCTR 408
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 97/232 (41%), Gaps = 4/232 (1%)
Query: 130 FNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEM 189
F L+ + + E +F D+P + + P + YN++I G A E+
Sbjct: 281 FTTLIDGLCKANRITEAKNIFLDMP-RYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEI 339
Query: 190 EKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQT 249
+K +R D T + ++ G G+ A + E M + N +YN +D
Sbjct: 340 IRKELRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNL 399
Query: 250 KKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLL 306
+AL M + P+V T+ +LI G G +E A Y + G N + L
Sbjct: 400 DEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTAL 459
Query: 307 VPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
+ + GD+D AF L K + + + ++VD L +E RV++A +
Sbjct: 460 IHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFI 511
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 93/245 (37%), Gaps = 40/245 (16%)
Query: 86 YKDISKEGFTAR------LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
Y D+ K G LI KA A+ +F +MP TV +N+L+
Sbjct: 266 YYDLLKCGLVPNDVIFTTLIDGLCKANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFR 325
Query: 140 SKKFDEVDGLFKDLPHK----------------------------------LGIEPDLVS 165
S E F+++ K GI + +
Sbjct: 326 SGYAQEALAFFQEIIRKELRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAA 385
Query: 166 YNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMV 225
YN +I + G+LD A M + G+ +++T+++L+ G NG A I+ MV
Sbjct: 386 YNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMV 445
Query: 226 NMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLE 285
V PNV +Y A + G A A L EM K I + T L+ G E ++
Sbjct: 446 AKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQ 505
Query: 286 EAKRW 290
+A R+
Sbjct: 506 DAVRF 510
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 77/165 (46%), Gaps = 3/165 (1%)
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
P L + N I+ V L L EM +G+ ++T+NTL+ G A A ++
Sbjct: 136 PALPACNAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWEV 195
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
W+ MV + PNV +Y + L E A L EM+ + P+++T+ AL+
Sbjct: 196 WDQMVARRIDPNVVTYTTMIYALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFK 255
Query: 281 EGNLEEAKR-WYNKSGCGM--NKAIFKLLVPFVCEKGDLDFAFNL 322
N++ A +Y+ CG+ N IF L+ +C+ + A N+
Sbjct: 256 RDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCKANRITEAKNI 300
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 101/228 (44%), Gaps = 8/228 (3%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI Y K+ + A M E V+++++L+ + + + ++ ++ K
Sbjct: 389 LIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAK- 447
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+EP++V+Y +I G +D+A L EME+KGI + IT + L+ G R DA
Sbjct: 448 GVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDA 507
Query: 218 EKI---WETMVNMNVRPNVR---SYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTF 271
+ + P++ +Y + GL I+ Q +A MR + PD FT+
Sbjct: 508 VRFIMEYSGQKKSEKNPSIANSVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTY 567
Query: 272 YALIKGFVNEGNLEEAKRWY-NKSGCGMNKAIFKLLVPFVCEKGDLDF 318
+I+G G + A Y + G+ ++ P + + +D+
Sbjct: 568 TLVIRGLCMLGYVLNAMMLYADMVKVGVKPTKCAMVCPDIWSRESVDY 615
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 63/303 (20%), Positives = 129/303 (42%), Gaps = 21/303 (6%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRT--NTGIYTGTVQRLANAKRFRWIEEILEHQ 83
++I G+ K N + + F D+ R+ +Y + A R + +E L
Sbjct: 283 TLIDGLCKANRITEAKNIFL---DMPRYEVAPTVPVYNSLIH---GAFRSGYAQEALAFF 336
Query: 84 KQY--KDISKEGFTARLIAL-YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNS 140
++ K++ + FT ++ + A + + M ++N L+ S
Sbjct: 337 QEIIRKELRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKS 396
Query: 141 KKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLIT 200
DE + ++G+EP++V+Y+++I G ++ A + EM KG+ +++T
Sbjct: 397 GNLDEALVTCTRM-SEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVT 455
Query: 201 FNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE-- 258
+ L+ G NG A + + M + N + + +DGL E + + A+ + E
Sbjct: 456 YTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFIMEYS 515
Query: 259 -MRSKEINPDV---FTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVC 311
+ E NP + T+ LI G +G EA +++ SG ++ + L++ +C
Sbjct: 516 GQKKSEKNPSIANSVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLC 575
Query: 312 EKG 314
G
Sbjct: 576 MLG 578
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 87/192 (45%), Gaps = 6/192 (3%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVL-SFNALLGACVNSKKFDEVDGLFKDLPHK 156
L+ + A+ + A VF GR E L + NA+L V + V LF ++ +
Sbjct: 112 LVIALSQMALPDEALSVF----GRLRELPALPACNAILDGLVKAHMLARVWELFDEMLGR 167
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
G+ P +V+YNT+I A +G + A + +M + I +++T+ T++ D
Sbjct: 168 -GMVPSVVTYNTLINACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMIYALCEEDCIGD 226
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
AE ++ M +RPN+ +YNA + K AL ++ + P+ F LI
Sbjct: 227 AEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLID 286
Query: 277 GFVNEGNLEEAK 288
G + EAK
Sbjct: 287 GLCKANRITEAK 298
>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
Length = 631
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 137/319 (42%), Gaps = 9/319 (2%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMP 119
Y +Q R ++ E K+ + FT L+ K+ E A +F E
Sbjct: 269 YNFIIQGFIRCGRLAEATQLFE-STMTKESVPDVFTYNLLIALCKSKQLEEALTLFQEAE 327
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL 179
V +++ L+ A + + + +F ++ K G PD V YN +I +G +
Sbjct: 328 QGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNM-QKAGCMPDTVVYNVLISCLGKQGKV 386
Query: 180 DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNAR 239
D A LL +M +KGI D T+N ++ S GR+ A + M P+V +YN
Sbjct: 387 DEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTL 446
Query: 240 LDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGC 296
L+GL ++T +A +L EM++ + PD+ TF LI G +E+A K G
Sbjct: 447 LNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGH 506
Query: 297 GMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVV----DRLAKELRVE 352
N I+ L+ C G +D + L + C D ++V R + +E
Sbjct: 507 APNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAME 566
Query: 353 EAKELVELGKTNSYCRYNL 371
+E+V G T + YN+
Sbjct: 567 LLQEMVREGHTPALATYNV 585
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 117/266 (43%), Gaps = 6/266 (2%)
Query: 99 IALYGKAAMFENARKVFDEMP-GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
I +G+A + A + D+M G C+ ++F A + ++ ++ LF D+
Sbjct: 60 IQAFGRAGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETC 119
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKG-IRLDLITFNTLLLGFYSNGRFAD 216
PD+V+YNT+I + G D A + ++++G + + ++F+TL++ R D
Sbjct: 120 DCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATD 179
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
A +++ M+ ++ +V N + ++A L+ M + D FT+ L+
Sbjct: 180 ALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVN 239
Query: 277 GFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV 333
G + E + GC ++ + ++ G L A L + T ++ +
Sbjct: 240 AHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVP 299
Query: 334 DQAPLQLVVDRLAKELRVEEAKELVE 359
D L++ L K ++EEA L +
Sbjct: 300 DVFTYNLLI-ALCKSKQLEEALTLFQ 324
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 77/166 (46%), Gaps = 1/166 (0%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
+ A +FDEM C + +F L+ + + ++ L K+G P+ YN
Sbjct: 457 DEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLV-KMGHAPNSYIYNA 515
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
+I F G +D L +M + D IT+ L+LGF G + A ++ + MV
Sbjct: 516 LISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREG 575
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYAL 274
P + +YN + L++ Q + A L EM +K NPD+ T+ AL
Sbjct: 576 HTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSAL 621
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 85/190 (44%), Gaps = 1/190 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I + +E A F M R V+++N LL ++ DE LF ++
Sbjct: 411 VIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANK 470
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
+ PDL ++ T+I G ++ A + K G + +N L+ GF +G+
Sbjct: 471 CM-PDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKG 529
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++++ M+ + P+ +Y + G + T A+EL+ EM + P + T+ LI+
Sbjct: 530 YELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRS 589
Query: 278 FVNEGNLEEA 287
G +E+A
Sbjct: 590 LSMAGQVEDA 599
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 129/312 (41%), Gaps = 9/312 (2%)
Query: 54 RTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTAR-LIALYGKAAMFENAR 112
+ +T +T + L +R + + ++ D + + LIA Y KA + A
Sbjct: 86 QPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDCAPDVVAYNTLIAGYCKAGDGDRAL 145
Query: 113 KVFDEMPGR-NCEQTVLSFNAL-LGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
+F + +C+ +SF+ L + C S+ D + +F+++ G++ D+ NT+I
Sbjct: 146 DMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDAL-AVFQEMLGA-GLKADVNVCNTLI 203
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
G L A LL+ M D T+ L+ G+ + E +
Sbjct: 204 HCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHCRAGQMHEVASFMELARHDGCA 263
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
+ +YN + G + +A +L +KE PDVFT Y L+ LEEA
Sbjct: 264 LSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVFT-YNLLIALCKSKQLEEALTL 322
Query: 291 YNKS---GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAK 347
+ ++ G ++ + L+ + G A + C+ D +++ L K
Sbjct: 323 FQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGK 382
Query: 348 ELRVEEAKELVE 359
+ +V+EA EL+E
Sbjct: 383 QGKVDEALELLE 394
>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 775
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 135/286 (47%), Gaps = 12/286 (4%)
Query: 84 KQYKDISKEGFTARLIAL------YGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GA 136
K YK++ GFT + Y K ENA +F M N T + ++ G
Sbjct: 423 KVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGL 482
Query: 137 CVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRL 196
C + F+ D LF + G P + YNTII F+ +G+++ A+ + EM + GI
Sbjct: 483 CKAGRSFEGRD-LFNKFVSQ-GFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITP 540
Query: 197 DLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELV 256
+T+ +L+ GF A K+ M ++ ++++Y +DG + K A EL+
Sbjct: 541 STVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELL 600
Query: 257 GEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEK 313
E+R ++P+ F + ++I GF N N+EEA Y K G + + L+ + +
Sbjct: 601 NELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKS 660
Query: 314 GDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
G L +A ++ S+ L D ++++ L + + E A++++E
Sbjct: 661 GRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILE 706
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 124/282 (43%), Gaps = 11/282 (3%)
Query: 86 YKDISKEGFTARLIAL------YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
Y ++ +G + + +L Y K ++NA +F++ V +FN LL
Sbjct: 321 YSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLAN-VFTFNTLLSWLCK 379
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
K +E L+ ++ K GI P++VSYN II K ++++A + EM G + +
Sbjct: 380 EGKMNEACNLWDEVIAK-GISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAV 438
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
TF L+ G++ G +A I+ M + N+ P + + GL ++ + +L +
Sbjct: 439 TFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKF 498
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS---GCGMNKAIFKLLVPFVCEKGDL 316
S+ P + +I GF+ EGN+ A Y + G + + L+ C+ ++
Sbjct: 499 VSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNI 558
Query: 317 DFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
D A L + +D ++D K ++ A EL+
Sbjct: 559 DLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELL 600
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 104/214 (48%), Gaps = 7/214 (3%)
Query: 86 YKDISKEGFT------ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
Y+++ + G T LI + K + A K+ ++M + + + ++ L+
Sbjct: 530 YREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCK 589
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
+ L +L G+ P+ YN++I F + +++ A L +M +GI DL
Sbjct: 590 RRDMKSAHELLNEL-RGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLK 648
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
T+ +L+ G +GR A I M++ + P+ R++ ++GL + Q + A +++ +M
Sbjct: 649 TYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDM 708
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK 293
K + P V + LI G EGNL+EA R +++
Sbjct: 709 NGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDE 742
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 118/262 (45%), Gaps = 9/262 (3%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I G KE N+ + +++ ++G +T YT + ++L K+
Sbjct: 512 TIIDGFIKEGNINLASNVYREMCEVG-ITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKR 570
Query: 86 Y---KDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKK 142
DI G LI + K ++A ++ +E+ G +N+++ N
Sbjct: 571 KGLKMDIKAYG---TLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNN 627
Query: 143 FDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFN 202
+E L+K + ++ GI DL +Y ++I + G L A+ + EM KGI D
Sbjct: 628 VEEAIDLYKKMVNE-GIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHT 686
Query: 203 TLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
L+ G + G+F +A KI E M N+ P+V YN + G E ++A L EM +
Sbjct: 687 VLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDR 746
Query: 263 EINPDVFTFYALIKG-FVNEGN 283
+ PD T+ L+ G F +GN
Sbjct: 747 GLVPDNITYDILVNGKFKGDGN 768
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 115/266 (43%), Gaps = 38/266 (14%)
Query: 129 SFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
+F +++ ACV E L D+ + G +L +++K + +G+L SA L+ E
Sbjct: 230 TFTSVITACVKEGNVAEALRLKDDMVN-CGKSMNLAVATSLMKGYCMQGNLRSALVLVNE 288
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDG------ 242
+ + G+ + +T++ L+ G NG A + + M +R +V S N+ L+G
Sbjct: 289 ISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQS 348
Query: 243 ----------------------------LAIEKQTKKALELVGEMRSKEINPDVFTFYAL 274
L E + +A L E+ +K I+P+V ++ +
Sbjct: 349 WQNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNI 408
Query: 275 IKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERC 331
I G + N+ A + Y + +G N F +L+ +KGD++ AF++ R
Sbjct: 409 ILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANI 468
Query: 332 LVDQAPLQLVVDRLAKELRVEEAKEL 357
L L +++ L K R E ++L
Sbjct: 469 LPTDTTLGIIIKGLCKAGRSFEGRDL 494
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 3/155 (1%)
Query: 212 GRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTF 271
G +AE+ + V + +Y+ + L ++ + AL L+ EMR+ P TF
Sbjct: 172 GNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTF 231
Query: 272 YALIKGFVNEGNLEEAKRWYNKS-GCG--MNKAIFKLLVPFVCEKGDLDFAFNLCKRTFS 328
++I V EGN+ EA R + CG MN A+ L+ C +G+L A L
Sbjct: 232 TSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISE 291
Query: 329 ERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKT 363
+ ++ +++D K +E+A E KT
Sbjct: 292 SGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKT 326
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 125/274 (45%), Gaps = 8/274 (2%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
+A ARK+F EM + + +++ AL+ + + E L + K G+ P++
Sbjct: 404 QAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEK-GLTPNV 462
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
V+Y ++ G +D AN LL+EM +KG++ ++ T+N L+ G G A K+ E
Sbjct: 463 VTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEE 522
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M P+ +Y +D + KA EL+ M K + P + TF L+ GF G
Sbjct: 523 MDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGM 582
Query: 284 LEEAKR---WYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL 340
LE+ +R W G N F L+ C + ++ + K ++ + D +
Sbjct: 583 LEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNI 642
Query: 341 VVDRLAKELRVEEA----KELVELGKTNSYCRYN 370
++ K ++EA KE+VE G + + YN
Sbjct: 643 LIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYN 676
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 120/268 (44%), Gaps = 8/268 (2%)
Query: 110 NARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTI 169
A +VF E +S+N +L K E L + + G PD+VSY+ I
Sbjct: 235 TAFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFR-GNVPDVVSYSVI 293
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
+ + L L+ E+++KG++ + T+N+++ GR +AE++ M N +
Sbjct: 294 VDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRI 353
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
P+ Y + G +L EM+ K+I PD T+ ++I G G + EA++
Sbjct: 354 FPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARK 413
Query: 290 WYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLA 346
+++ G ++ + L+ C+ G++ AF+L + + + +VD L
Sbjct: 414 LFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLC 473
Query: 347 KELRVEEAKELV----ELGKTNSYCRYN 370
K V+ A EL+ E G + C YN
Sbjct: 474 KCGEVDIANELLHEMSEKGLQPNVCTYN 501
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 94/235 (40%), Gaps = 36/235 (15%)
Query: 53 FRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENAR 112
+ N Y + L R E++L K + LI+ +GK+
Sbjct: 318 LKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEY 377
Query: 113 KVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKA 172
K+FDEM + I PD V+Y ++I
Sbjct: 378 KLFDEMKRKK------------------------------------IVPDFVTYTSMIHG 401
Query: 173 FVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPN 232
G + A L EM KG++ D +T+ L+ G+ G +A + MV + PN
Sbjct: 402 LCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPN 461
Query: 233 VRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
V +Y A +DGL + A EL+ EM K + P+V T+ ALI G GN+E+A
Sbjct: 462 VVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQA 516
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 126/276 (45%), Gaps = 11/276 (3%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPH--KLGIEP 161
+A + A K+FD++ +V S N L NS FD + F+ ++G+
Sbjct: 193 EAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARLSNS--FDGIRTAFRVFREYSEVGVCW 250
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
+ VSYN I+ G + A++LL +ME +G D+++++ ++ G+ + K+
Sbjct: 251 NTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLM 310
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
E + ++PN +YN+ + L + +A +++ M+++ I PD + LI GF
Sbjct: 311 EELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKS 370
Query: 282 GNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPL 338
GN+ + ++ + + + ++ +C+ G + A L S+ D+
Sbjct: 371 GNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTY 430
Query: 339 QLVVDRLAKELRVEEA----KELVELGKTNSYCRYN 370
++D K ++EA ++VE G T + Y
Sbjct: 431 TALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYT 466
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 103/240 (42%), Gaps = 16/240 (6%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I G+ K N+++ V K + DL F +T YT + E+L
Sbjct: 502 ALINGLCKVGNIEQAV-KLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELL----- 555
Query: 86 YKDISKEGFTARLIAL------YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGA-CV 138
+ + +G ++ + + M E+ ++ M + +FN+L+ C+
Sbjct: 556 -RIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCI 614
Query: 139 NSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL 198
+ ++ ++K + H G+ PD +YN +IK ++ A L EM +KG L
Sbjct: 615 RNNMRATIE-IYKGM-HAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTA 672
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
++N+L+ GFY +F +A K++E M Y+ +D E + LEL E
Sbjct: 673 ASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNWENTLELCDE 732
>gi|357512639|ref|XP_003626608.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240852|gb|ABD32710.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355501623|gb|AES82826.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 451
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 112/233 (48%), Gaps = 7/233 (3%)
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
+ D R L G ++ A +F++M R+ + S+ L+ A + +
Sbjct: 179 FPDTKSYNILMRAFCLNGDISI---AYTLFNKMFKRDVVPDIQSYRILMQALCRKSQVNG 235
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
LF+D+ +K G PD +Y T++ + K L A LL M+ KG D++ +NT++
Sbjct: 236 AVDLFEDMLNK-GFVPDSFTYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVI 294
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEIN 265
LGF GR DA K+ + M PN+ SY ++GL +A + V EM SK +
Sbjct: 295 LGFCREGRAHDACKVIDDMQANGCLPNLVSYRTLVNGLCHLGMLDEATKYVEEMLSKGFS 354
Query: 266 PDVFTFYALIKGFVNEGNLEEAKRWYNKS---GCGMNKAIFKLLVPFVCEKGD 315
P +AL+KGF N G +EEA KS +K + ++VP +CE D
Sbjct: 355 PHFAVIHALVKGFCNVGRIEEACGVLTKSLEHREAPHKDTWMIIVPQICEVDD 407
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 146/317 (46%), Gaps = 8/317 (2%)
Query: 44 FKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ--YKDISKEGFTARLIAL 101
F +S FR N Y + + +K F ++++L K + I+ F+ LI +
Sbjct: 62 FDYASLQPNFRHNYSTYLILILKFGRSKHFSLLDDLLRRLKSESSQPITPTLFSY-LIKI 120
Query: 102 YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKF-DEVDGLFKDLPHKLGIE 160
YG+A + + A F M N + N +L V+ + + LFKD HK G+
Sbjct: 121 YGEANLPDKALNTFYIMLQFNIKPLTKHLNRILDILVSHRNYLRPAFDLFKD-AHKHGVF 179
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
PD SYN +++AF G + A TL +M K+ + D+ ++ L+ + A +
Sbjct: 180 PDTKSYNILMRAFCLNGDISIAYTLFNKMFKRDVVPDIQSYRILMQALCRKSQVNGAVDL 239
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
+E M+N P+ +Y L+ L +K+ ++A +L+ M+ K NPD+ + +I GF
Sbjct: 240 FEDMLNKGFVPDSFTYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVILGFCR 299
Query: 281 EGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAP 337
EG +A + + +GC N ++ LV +C G LD A + S+ A
Sbjct: 300 EGRAHDACKVIDDMQANGCLPNLVSYRTLVNGLCHLGMLDEATKYVEEMLSKGFSPHFAV 359
Query: 338 LQLVVDRLAKELRVEEA 354
+ +V R+EEA
Sbjct: 360 IHALVKGFCNVGRIEEA 376
>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
Length = 1088
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 113/237 (47%), Gaps = 4/237 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I Y + +A ++ D M C+ S+ L+ K + GLF ++
Sbjct: 636 IIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDD- 694
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ P+ V+Y +I + LD+A +LL M++ G R ++ T+N L+ G F+ A
Sbjct: 695 GLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGA 754
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
E++ + M+ + PNV +Y A +DGL T ALE+ +M + P++ T+ +LI+
Sbjct: 755 EELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRA 814
Query: 278 FVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERC 331
EG +EEA+ + + G ++ + ++ G ++ AFN R C
Sbjct: 815 LGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGC 871
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 88/381 (23%), Positives = 164/381 (43%), Gaps = 50/381 (13%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKR----FRWIEEILE 81
S+I G ++++L + F + + G NT Y+ + L ++ R F I E++
Sbjct: 425 SMILGHCRKHDLDSALQVFNQMAKEG-CEPNTVTYSTLINGLCDSGRVNEAFDLIREMIL 483
Query: 82 HQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNS 140
H + T +IAL +E+A ++F +M + CE V ++ AL+ G CV+
Sbjct: 484 HGIL---PTAHTCTGPIIALCDMGC-YEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSG 539
Query: 141 ------KKFDEV--DGLFKD-------------------------LPHKLGIEPDLVSYN 167
F + DG+F + L + G+ ++V+YN
Sbjct: 540 LLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYN 599
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
+IK + G A ++ M ++G +L+T+NT++ G+ +G A +I + M +
Sbjct: 600 EMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDG 659
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+P+ SY + G + + A L EM + P+ T+ ALI G+ + L+ A
Sbjct: 660 GCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTA 719
Query: 288 K---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDR 344
+SGC N + +L+ + ++ + A LCK E + ++D
Sbjct: 720 TSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDG 779
Query: 345 LAK----ELRVEEAKELVELG 361
L K L +E +++E G
Sbjct: 780 LCKNGSTSLALEMFNKMIEQG 800
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 95/203 (46%), Gaps = 3/203 (1%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G +LV+YNTIIK + D G+ SA +L M G + D ++ L+ GF + A
Sbjct: 625 GHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESA 684
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ MV+ + PN +Y A +DG +++ A L+ M+ P+V T+ LI G
Sbjct: 685 FGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHG 744
Query: 278 FVNEGNL---EEAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
+ N EE + + G N + ++ +C+ G A + + + CL +
Sbjct: 745 LTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPN 804
Query: 335 QAPLQLVVDRLAKELRVEEAKEL 357
++ L +E +VEEA+ L
Sbjct: 805 LLTYSSLIRALGQEGKVEEAENL 827
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 78/372 (20%), Positives = 157/372 (42%), Gaps = 43/372 (11%)
Query: 40 LVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFT-ARL 98
++D++ + G + N IY + L E I++ + ++S + FT +
Sbjct: 369 VMDRYHRMLSEG-VQPNLLIYNAVINALCKDGNVADAETIMKKVFE-SEMSPDTFTYTSM 426
Query: 99 IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE---------VDG- 148
I + + ++A +VF++M CE ++++ L+ +S + +E + G
Sbjct: 427 ILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGI 486
Query: 149 -------------------------LFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSAN 183
LF D+ +K G EP++ +Y +I G L A
Sbjct: 487 LPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNK-GCEPNVYTYTALISGLCVSGLLKVAI 545
Query: 184 TLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
L + M + G+ + +T+N L+ N R A + M + N+ +YN + G
Sbjct: 546 GLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGY 605
Query: 244 AIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNK 300
I KKA+ ++ M + + ++ T+ +IKG+ + GN A R + GC ++
Sbjct: 606 CILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDE 665
Query: 301 AIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVEL 360
+ L+ C+ ++ AF L + ++ ++D K+ +++ A L+E
Sbjct: 666 WSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEH 725
Query: 361 GKTNSYCRYNLK 372
K S CR N++
Sbjct: 726 MK-RSGCRPNVQ 736
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 82/159 (51%), Gaps = 3/159 (1%)
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
+IK+ K ++ + L + + G+R+ L ++ LL+ G A + M++
Sbjct: 321 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 380
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
V+PN+ YNA ++ L + A ++ ++ E++PD FT+ ++I G + +L+ A
Sbjct: 381 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 440
Query: 289 RWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCK 324
+ +N K GC N + L+ +C+ G ++ AF+L +
Sbjct: 441 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIR 479
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 86/188 (45%), Gaps = 2/188 (1%)
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
+TA LI Y K + A + + M C V ++N L+ F + L K +
Sbjct: 703 YTA-LIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVM 761
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
+ GI P++V+Y +I GS A + +M ++G +L+T+++L+ G+
Sbjct: 762 IEE-GIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGK 820
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
+AE ++ + + P+ +Y ++ + + + A +G M P ++T+
Sbjct: 821 VEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGV 880
Query: 274 LIKGFVNE 281
LIKG NE
Sbjct: 881 LIKGLKNE 888
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 83/382 (21%), Positives = 165/382 (43%), Gaps = 57/382 (14%)
Query: 26 SVIRGIYKENNL---KRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEH 82
++I G K+ L L++ K+S R N Y + L F EE+
Sbjct: 705 ALIDGYCKDEKLDTATSLLEHMKRSG----CRPNVQTYNVLIHGLTKQNNFSGAEELC-- 758
Query: 83 QKQYKDISKEG-------FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLG 135
K + +EG +TA + L K A ++F++M + C +L++++L+
Sbjct: 759 ----KVMIEEGIFPNVVTYTAMIDGLC-KNGSTSLALEMFNKMIEQGCLPNLLTYSSLIR 813
Query: 136 ACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIR 195
A K +E + LF +L + G+ PD ++Y +I+A++ G ++ A L M K G +
Sbjct: 814 ALGQEGKVEEAENLFAEL-ERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQ 872
Query: 196 LDLITFNTLLLGF-----YSNGRFA------------------DAEKIWET-MVNMNVRP 231
L T+ L+ G ++ R A DA + + ++
Sbjct: 873 PTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGL 932
Query: 232 NVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK--- 288
+V+ NA + L+ + +A EL+G M S+ + PD + +L+ + N++ A
Sbjct: 933 SVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVF 992
Query: 289 RWYNKSGCGMNKAIFKLLVPFVCE---KGDLDFAF-NLCKRTFSERCLVDQAPLQLVVDR 344
+ + GC ++ +K L+ +C+ + + F N+ RT++ D +++D
Sbjct: 993 KHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNP----DDVVQAVLIDG 1048
Query: 345 LAKELRVEEAKELVELGKTNSY 366
L ++ + E + + +T Y
Sbjct: 1049 LLRDGYKDLCMEFLHIMETRRY 1070
>gi|384251959|gb|EIE25436.1| TPR-like protein [Coccomyxa subellipsoidea C-169]
Length = 627
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 138/340 (40%), Gaps = 51/340 (15%)
Query: 86 YKDISKEGFTARLIALYGKA-------AMFENARKVFDEMPGRNCEQTVLSFNALLGACV 138
++++ G ALY + A + M G V ++N LL
Sbjct: 155 WRELDASGLATGNAALYAAGMNACIGLGYVDEAAGLLRTMQGWGMRADVRAYNILLKGQA 214
Query: 139 NSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL 198
N+ + D+ +L + P +V+YN +I AFV++G L+ A L E +K G+RLDL
Sbjct: 215 NAHSLSAMQATMADM-ERLQVAPSVVTYNILIDAFVNEGLLEQAAAKLQEAQKLGLRLDL 273
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
++NTL+ GF + ADA + E M NV+PNV +Y +DG A E++ +
Sbjct: 274 WSYNTLIKGFCQANQVADARDVLEAMKLQNVQPNVVTYTTLVDGCVRAGDLFLAEEMLRD 333
Query: 259 MRSKEINPDVFTFYALIKGFVNEG-----NLEEAKRWYNKSGCGMNKAIFKLLVPFVCEK 313
M+ + P+ TF +++G+ + E R +G + F L+ +
Sbjct: 334 MQFMGVPPNTVTFNIMLRGYCQWSTRPIQDALETLRSMGMAGVVPSTDTFNTLMGACLSR 393
Query: 314 GDLDFAFNLCKRTFS------------------------------------ERCLVDQAP 337
GD L +R S R VD A
Sbjct: 394 GDPGAVPRLFRRLISLGHTPDALSYTSLITSLTRLGRPEDAVLAFRAMEADARVAVDLAA 453
Query: 338 LQLVVDRLAKELRVEEAKELVELGKTNSYCRYNLKFPSEE 377
L VVD LA+ R+ +A++ +E + CR + P E
Sbjct: 454 LNAVVDALARCGRMGDAEDQLE--RATELCRRRGRPPPLE 491
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 68/164 (41%), Gaps = 6/164 (3%)
Query: 129 SFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
+FN L+GAC++ V LF+ L LG PD +SY ++I + G + A
Sbjct: 382 TFNTLMGACLSRGDPGAVPRLFRRL-ISLGHTPDALSYTSLITSLTRLGRPEDAVLAFRA 440
Query: 189 MEKKG-IRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR----PNVRSYNARLDGL 243
ME + +DL N ++ GR DAE E + R P + +Y A L
Sbjct: 441 MEADARVAVDLAALNAVVDALARCGRMGDAEDQLERATELCRRRGRPPPLEAYGALLAEY 500
Query: 244 AIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
A + AL ++ E + PD F ++ + G A
Sbjct: 501 ARRRDADAALAVLQEFFERGGTPDDQMFDTVMDLCMRTGEFRRA 544
>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
Length = 653
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 101/199 (50%), Gaps = 4/199 (2%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A KVFD M ++C V+S+N L+ + D+ LF+++ + + P+ V+YNT+I
Sbjct: 334 AVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQ-ELTPNTVTYNTLI 392
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
G L A +L +EM +G DL+T+ TL N A + + + N
Sbjct: 393 HGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWD 452
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
P+++ Y LDG+ + + A +L + SK + P+V+T+ +I G +G L EA +
Sbjct: 453 PDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKL 512
Query: 291 Y---NKSGCGMNKAIFKLL 306
+ NK+GC N + L+
Sbjct: 513 FSEMNKNGCSPNDCTYNLI 531
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 147/335 (43%), Gaps = 5/335 (1%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++IRG+ E + + F K G F+ N Y + L +L +Q
Sbjct: 145 TLIRGLCVEGKIGEALHLFDKMIGEG-FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQ 203
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
+ LI K A +F EM + ++++N+L+ ++
Sbjct: 204 GNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKH 263
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
V L ++ I PD+ + NT++ A +G + A+ ++ M +G+ +++T+N L+
Sbjct: 264 VTTLMNEMVDS-KIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALM 322
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEIN 265
G A K+++TMV+ + NV SYN ++G + KA+ L EM +E+
Sbjct: 323 DGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELT 382
Query: 266 PDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
P+ T+ LI G + G L++A +++ G + ++ L ++C+ LD A L
Sbjct: 383 PNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMAL 442
Query: 323 CKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
K D ++D + + +E+A++L
Sbjct: 443 LKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDL 477
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 111/256 (43%), Gaps = 4/256 (1%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
+ A F+ M + + + FN LL + +K + L + + GI PD+ +
Sbjct: 51 LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM-DSFGIPPDVYTLA 109
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
+I + +D A + L ++ K G + D TF TL+ G G+ +A +++ M+
Sbjct: 110 IVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGE 169
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+PNV +Y ++GL T A+ L+ M P+V F LI + + EA
Sbjct: 170 GFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEA 229
Query: 288 KRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDR 344
+++ G N + L+ +C+ + L + + D L VVD
Sbjct: 230 FNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDA 289
Query: 345 LAKELRVEEAKELVEL 360
L KE V EA ++V++
Sbjct: 290 LCKEGMVAEAHDVVDM 305
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 83/213 (38%), Gaps = 7/213 (3%)
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
S+NT + +LD A + M K + FN LL + + M
Sbjct: 37 SHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM 96
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
+ + P+V + ++ L + A + ++ PD TF LI+G EG +
Sbjct: 97 DSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKI 156
Query: 285 EEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLV 341
EA ++K G N + L+ +C+ G+ A L + C + +
Sbjct: 157 GEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTL 216
Query: 342 VDRLAKELRVEEA----KELVELGKTNSYCRYN 370
+D L K+ +V EA E++ G + + YN
Sbjct: 217 IDSLCKDRQVTEAFNIFSEMITKGISPNIVTYN 249
>gi|410109919|gb|AFV61039.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
duartei]
Length = 412
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 150/334 (44%), Gaps = 30/334 (8%)
Query: 66 RLANAKRFRWI-----EEILEHQKQ----------YKDISKEGFTARL------IALYGK 104
RL +F W+ ++LEH + Y++I + G+ A L + + K
Sbjct: 77 RLTREHKF-WVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCK 135
Query: 105 AAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLV 164
A+ VFD + +V+S+N L+ + DE L K G++PD+
Sbjct: 136 DGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRXGDLDEGFXL-KSXMLASGVQPDVY 194
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
+Y+ +I + +D AN L EM KG+ + +TF TL+ G NGR A +I++ M
Sbjct: 195 TYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 254
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
++ ++ P++ +YN + GL + K+A L+ EM K + PD T+ LI G EG+L
Sbjct: 255 LSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLINGCCKEGDL 314
Query: 285 EEA---KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLV 341
+ A ++ + +++ + L+ C++G A + + S D ++
Sbjct: 315 DSAFEHRKRMIQENIRLDEVAYTALISGXCQEGRSVDAEKMLREMLSVGLKPDARTYTMI 374
Query: 342 VDRLAKELRVEEA----KELVELGKTNSYCRYNL 371
++ K V KE+ G S YN+
Sbjct: 375 INEFCKXGDVWXGSKLLKEMQRDGHVPSVVTYNV 408
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 87/180 (48%), Gaps = 1/180 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K + A +++ +M ++ ++++N L+ + L ++ K
Sbjct: 234 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVK- 292
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD ++Y T+I +G LDSA M ++ IRLD + + L+ G GR DA
Sbjct: 293 GLKPDKITYTTLINGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGXCQEGRSVDA 352
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
EK+ M+++ ++P+ R+Y ++ +L+ EM+ P V T+ L+ G
Sbjct: 353 EKMLREMLSVGLKPDARTYTMIINEFCKXGDVWXGSKLLKEMQRDGHVPSVVTYNVLMNG 412
>gi|218189906|gb|EEC72333.1| hypothetical protein OsI_05540 [Oryza sativa Indica Group]
Length = 747
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 140/287 (48%), Gaps = 7/287 (2%)
Query: 79 ILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACV 138
+L+ + +E A LIA YGKA + + + K+F MP +T LS+NA+L A +
Sbjct: 159 LLDTMPSFSIAPEEATVAALIAAYGKANIPQESVKLFRLMPDLGIARTALSYNAVLKAIL 218
Query: 139 NSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL 198
+ ++ + + PDL +YNT+I F +++A + +M+ G+ D+
Sbjct: 219 CRGREAMARRIYNAMIAD-AVTPDLSTYNTLIWGFGLCKKMEAALRVFGDMKDHGVTPDV 277
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
T+NTLL + G A K+++ M N SYN + G + ++A+ L E
Sbjct: 278 TTYNTLLNAWVRAGDLESARKVFDEMPGAGFAQNSVSYNVMIKGYVEAGKVEEAVGLFSE 337
Query: 259 MRSKEINPDVFTFYALIKGFV-NEGNLEEAKRWYNKSG----CGMNKAIFKLLVPFVCEK 313
M K + TF AL+ G +EG + EA++ + +K++F LV +C
Sbjct: 338 MGEKGLRLSEKTFAALMPGLCDDEGRVVEARKAMDDMAERRLTPKDKSVFLRLVTTLCRA 397
Query: 314 GDLDFAFNLCKRTFS-ERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
GDLD A ++ +++ + LVD ++++ L + + A E+++
Sbjct: 398 GDLDGALDVHQKSGQFKHVLVDPRQYGVLMESLCAGGKCDGAVEVMD 444
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 93/204 (45%), Gaps = 7/204 (3%)
Query: 129 SFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
+F+ L+ + + + D I P+ + +I A+ + L
Sbjct: 138 TFSLLIPILASHSMLNHARCILLDTMPSFSIAPEEATVAALIAAYGKANIPQESVKLFRL 197
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
M GI +++N +L GR A A +I+ M+ V P++ +YN + G + K+
Sbjct: 198 MPDLGIARTALSYNAVLKAILCRGREAMARRIYNAMIADAVTPDLSTYNTLIWGFGLCKK 257
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKL 305
+ AL + G+M+ + PDV T+ L+ +V G+LE A++ +++ +G N + +
Sbjct: 258 MEAALRVFGDMKDHGVTPDVTTYNTLLNAWVRAGDLESARKVFDEMPGAGFAQNSVSYNV 317
Query: 306 LVPFVCEKGDLDFAFNLCKRTFSE 329
++ E G ++ A L FSE
Sbjct: 318 MIKGYVEAGKVEEAVGL----FSE 337
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 33/171 (19%), Positives = 81/171 (47%), Gaps = 5/171 (2%)
Query: 129 SFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
++N ++ ++ + + F+ L K G++ D ++N++I+ +G ++A +L
Sbjct: 464 AYNPVIEYLCSNGNTSKAETFFRQLMKK-GVD-DKAAFNSLIRGHAKEGVPEAAQEILAI 521
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
M ++G+R D + L+ F ADA+ ++M+ P+ + + + L +
Sbjct: 522 MTRRGVRTDPESHALLVDSFLKKNEPADAKTALDSMMEQGHVPSPSLFMSVMVALFNGGR 581
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGC 296
+ A ++ M K + ++ + +++ G++EEA N ++GC
Sbjct: 582 VQTASRVMKSMIEKGVTENMDMAHKILEALFMRGHVEEAIGRVNLMVENGC 632
>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 644
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 144/339 (42%), Gaps = 7/339 (2%)
Query: 25 GSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQK 84
G++I + K+ + + F + G N V L N ++ + +L
Sbjct: 218 GTLIHSLCKDRQQTQAFNLFSEMITKG-ISPNIVTCNSLVYALCNLGEWKHVNTLLNEMV 276
Query: 85 QYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKF 143
K + ++ K M A V D M E V+++ AL+ G C+ S +
Sbjct: 277 DSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRS-EM 335
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT 203
DE +F + HK G P++ SYNT+I + +D A L EM ++ + + +T+NT
Sbjct: 336 DEAVKVFDMMVHK-GCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNT 394
Query: 204 LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
L+ G GR DA ++ MV P++ +Y LD L KA+ L+ +
Sbjct: 395 LIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSN 454
Query: 264 INPDVFTFYALIKGFVNEGNLEEAKRWY-NKSGCGM--NKAIFKLLVPFVCEKGDLDFAF 320
++PD+ + +I G G LE+A+ + N S G+ N + ++ +C++G LD A
Sbjct: 455 LDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEAT 514
Query: 321 NLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
L C D + + A +L+E
Sbjct: 515 KLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLE 553
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 116/257 (45%), Gaps = 5/257 (1%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
+ A KVFD M + C V S+N L+ ++ D+ LF+++ + I P+ V+YN
Sbjct: 335 MDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLI-PNTVTYN 393
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
T+I G L A L EM G DL+T+ LL N A + + +
Sbjct: 394 TLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGS 453
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
N+ P+++ Y +DG+ + + A +L + SK + P+V+T+ + G G L+EA
Sbjct: 454 NLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEA 513
Query: 288 KRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDR 344
+ + +++ C + + + + A L + + D + L+V
Sbjct: 514 TKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCDVSTTTLLVGM 573
Query: 345 LAKE-LRVEEAKELVEL 360
L+ + L EA +L ++
Sbjct: 574 LSDDGLDQSEAHKLEDM 590
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 95/208 (45%), Gaps = 3/208 (1%)
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
KLG +PD S+ T+IK +G + A L +M +G + D++ + TL+ G G +
Sbjct: 137 KLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTS 196
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
A ++ +M N +P+V Y + L ++Q +A L EM +K I+P++ T +L+
Sbjct: 197 AAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLV 256
Query: 276 KGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCL 332
N G + N+ S N +V +C++G + A ++ F
Sbjct: 257 YALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVE 316
Query: 333 VDQAPLQLVVDRLAKELRVEEAKELVEL 360
D ++D ++EA ++ ++
Sbjct: 317 PDVVTYTALIDGHCLRSEMDEAVKVFDM 344
Score = 41.6 bits (96), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 71/183 (38%), Gaps = 7/183 (3%)
Query: 178 SLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYN 237
+L S N +L+ I + F +L R++ + M + + NV + N
Sbjct: 58 ALSSFNRMLHMHPPPSI----VDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLN 113
Query: 238 ARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---S 294
++ + A ++ ++ PD +F LIKG EG + EA ++K
Sbjct: 114 VLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWE 173
Query: 295 GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA 354
G + I+ L+ +C+ G A L + C D ++ L K+ + +A
Sbjct: 174 GFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQA 233
Query: 355 KEL 357
L
Sbjct: 234 FNL 236
>gi|410109893|gb|AFV61026.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
fucata]
Length = 414
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 152/334 (45%), Gaps = 30/334 (8%)
Query: 66 RLANAKRFRWI-----EEILEHQKQ----------YKDISKEGFTARL------IALYGK 104
RL +F W+ ++LEH + Y++I + G+ A L + + K
Sbjct: 79 RLTREHKF-WVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCK 137
Query: 105 AAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLV 164
A+ VFD + +V+S+N L+ + DE L K G++PD+
Sbjct: 138 DGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL-KSAMLASGVQPDVY 196
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
+Y+ +I + +D AN L EM KG+ + +TF TL+ G NGR A +I++ M
Sbjct: 197 TYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQM 256
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
++ ++ P++ +YN + GL + K+A L+ EM K + PD T+ LI G +G+L
Sbjct: 257 LSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDL 316
Query: 285 E---EAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLV 341
+ E ++ + ++ ++ L+ +C +G A + + S D ++
Sbjct: 317 DTAFEHRKRMIQENTRLDDVVYTALISGLCREGXSVDAEKMLREMLSVGLKPDARTYTMI 376
Query: 342 VDRLAKELRVEEA----KELVELGKTNSYCRYNL 371
++ K+ V + KE+ G S YN+
Sbjct: 377 INEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNV 410
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 86/180 (47%), Gaps = 1/180 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K + A +++ +M ++ ++++N L+ + L ++ K
Sbjct: 236 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMK- 294
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD ++Y T+I G LD+A M ++ RLD + + L+ G G DA
Sbjct: 295 GLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGXSVDA 354
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
EK+ M+++ ++P+ R+Y ++ + K +L+ EM+ P V T+ L+ G
Sbjct: 355 EKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 414
>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
Length = 1001
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 101/199 (50%), Gaps = 4/199 (2%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A KVFD M ++C V+S+N L+ + D+ LF+++ + + P+ V+YNT+I
Sbjct: 274 AVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQ-ELTPNTVTYNTLI 332
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
G L A +L +EM +G DL+T+ TL N A + + + N
Sbjct: 333 HGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWD 392
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
P+++ Y LDG+ + + A +L + SK + P+V+T+ +I G +G L EA +
Sbjct: 393 PDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKL 452
Query: 291 Y---NKSGCGMNKAIFKLL 306
+ NK+GC N + L+
Sbjct: 453 FSEMNKNGCSPNDCTYNLI 471
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 121/264 (45%), Gaps = 6/264 (2%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMP 119
Y + L N ++ + +L K + + ++ K M A V D M
Sbjct: 676 YNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMI 735
Query: 120 GRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGS 178
R E V+++ AL+ G C+ S + DE +F + HK G P++ SYN +I +
Sbjct: 736 KRGVEPDVVTYTALMDGHCLRS-EMDEAVKVFDTMVHK-GCVPNVRSYNILINGYCQIQR 793
Query: 179 LDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNA 238
+D A LL +M +G+ D +T+NTL+ G GR A ++ MV P++ +Y
Sbjct: 794 MDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRI 853
Query: 239 RLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY-NKSGCG 297
LD L +A+ L+ + ++ D+ + I G G LE A+ + N S G
Sbjct: 854 LLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKG 913
Query: 298 MNKAI--FKLLVPFVCEKGDLDFA 319
+ + + +++ +C++G LD A
Sbjct: 914 LQPDVRTYNIMIHGLCKRGLLDEA 937
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 91/186 (48%), Gaps = 1/186 (0%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
+ A KVFD M + C V S+N L+ ++ D+ GL + + + G+ D V+YN
Sbjct: 759 MDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQ-GLIADTVTYN 817
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
T+I G L A L +EM G DL+T+ LL N A+A + + +
Sbjct: 818 TLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGS 877
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
N+ ++ YN +DG+ + + A +L + SK + PDV T+ +I G G L+EA
Sbjct: 878 NLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEA 937
Query: 288 KRWYNK 293
+ + K
Sbjct: 938 NKLFRK 943
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 120/234 (51%), Gaps = 4/234 (1%)
Query: 127 VLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLL 186
+ ++N+L+ A N ++ V L ++ + I P++V ++T++ A +G + A+ ++
Sbjct: 673 IFTYNSLIHALCNLCEWKHVTTLLNEMVNS-KIMPNVVVFSTVVDALCKEGMIAIAHDVV 731
Query: 187 YEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIE 246
M K+G+ D++T+ L+ G +A K+++TMV+ PNVRSYN ++G
Sbjct: 732 DMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQI 791
Query: 247 KQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIF 303
++ KA+ L+ +M + + D T+ LI G + G L+ A +++ SG + +
Sbjct: 792 QRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTY 851
Query: 304 KLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
++L+ ++C+ L A L K D + +D + + +E A++L
Sbjct: 852 RILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDL 905
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 129/276 (46%), Gaps = 12/276 (4%)
Query: 92 EGFTARLIALYG-------KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
EGF ++ YG K A +F EM + ++++N+L+ ++
Sbjct: 144 EGFQPNVVT-YGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWK 202
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
V L ++ I PD+ + NT++ A +G + A+ ++ M +G+ +++T+N L
Sbjct: 203 HVTTLMNEMVDS-KIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNAL 261
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+ G A K+++TMV+ + NV SYN ++G + KA+ L EM +E+
Sbjct: 262 MDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQEL 321
Query: 265 NPDVFTFYALIKGFVNEGNLEEAKRWYNKS---GCGMNKAIFKLLVPFVCEKGDLDFAFN 321
P+ T+ LI G + G L++A +++ G + ++ L ++C+ LD A
Sbjct: 322 TPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMA 381
Query: 322 LCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
L K D ++D + + +E+A++L
Sbjct: 382 LLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDL 417
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 107/253 (42%), Gaps = 33/253 (13%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
+ A F+ M + + + FN LL + +K + L + + GI PD+ +
Sbjct: 26 LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMD-SFGIPPDVYTLA 84
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
+I + +D A + L ++ K G + D TF TL+ G G+ +A +++ M+
Sbjct: 85 IVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGE 144
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+PNV +Y ++GL ++Q +A + EM +K I+P++ T+ +LI G
Sbjct: 145 GFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGL--------- 195
Query: 288 KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAK 347
C+ + L + + D L VVD L K
Sbjct: 196 -----------------------CKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCK 232
Query: 348 ELRVEEAKELVEL 360
E V EA ++V++
Sbjct: 233 EGMVAEAHDVVDM 245
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 106/232 (45%), Gaps = 6/232 (2%)
Query: 134 LGACVNSK-KFDEVDGLFKDLPH--KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEME 190
L +NS + VD F L KLG +PD ++ T+I+ +G + A L +M
Sbjct: 83 LAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMI 142
Query: 191 KKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTK 250
+G + +++T+ TL+ G + + +A I+ M+ + PN+ +YN+ + GL + K
Sbjct: 143 GEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWK 202
Query: 251 KALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLV 307
L+ EM +I PDVFT ++ EG + EA + G N + L+
Sbjct: 203 HVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALM 262
Query: 308 PFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
C + ++D A + + C+ + +++ K V++A L E
Sbjct: 263 DGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFE 314
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 94/205 (45%), Gaps = 3/205 (1%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
GI PD+ +YN++I A + TLL EM I +++ F+T++ G A A
Sbjct: 668 GISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIA 727
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ + M+ V P+V +Y A +DG + + +A+++ M K P+V ++ LI G
Sbjct: 728 HDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILING 787
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
+ +++A + G + + L+ +C G L A L + + D
Sbjct: 788 YCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPD 847
Query: 335 QAPLQLVVDRLAKELRVEEAKELVE 359
++++D L K + EA L++
Sbjct: 848 LVTYRILLDYLCKNHHLAEAMVLLK 872
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 98/223 (43%), Gaps = 20/223 (8%)
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
KLG +PD+V+Y T++ L +M KGI D+ T+N+L+ + +
Sbjct: 644 KLGFQPDVVTYGTLMNG-------------LCKMITKGISPDIFTYNSLIHALCNLCEWK 690
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
+ MVN + PNV ++ +D L E A ++V M + + PDV T+ AL+
Sbjct: 691 HVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALM 750
Query: 276 KGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCL 332
G ++EA + ++ GC N + +L+ C+ +D A L ++ + +
Sbjct: 751 DGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLI 810
Query: 333 VDQAPLQLVVDRLAKELRVEEA----KELVELGKTNSYCRYNL 371
D ++ L R++ A E+V G+ Y +
Sbjct: 811 ADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRI 853
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 71/165 (43%), Gaps = 16/165 (9%)
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
P V + ++ + + +L +M+ GI D+ T N L+ F R A +
Sbjct: 579 PSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSV 638
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
++ + +P+V +Y ++GL +M +K I+PD+FT+ +LI N
Sbjct: 639 LAKLLKLGFQPDVVTYGTLMNGLC-------------KMITKGISPDIFTYNSLIHALCN 685
Query: 281 EGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
+ N+ S N +F +V +C++G + A ++
Sbjct: 686 LCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDV 730
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 52/117 (44%), Gaps = 1/117 (0%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
++A +F EM ++++ LL + E L K + ++ D++ YN
Sbjct: 829 LQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGS-NLDADILVYN 887
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
I G L++A L + KG++ D+ T+N ++ G G +A K++ M
Sbjct: 888 IAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKM 944
>gi|449479180|ref|XP_004155527.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 653
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 156/343 (45%), Gaps = 20/343 (5%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRF-RWIEEILEHQKQ 85
+I+G K L++ ++KF+ ++ + + Y +Q + + F + LE +++
Sbjct: 261 MIKGYCKAGKLQKAMEKFR-DMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEER 319
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
+I ++ + L + E A VF+ M + C V + AL+ + + +E
Sbjct: 320 GLEIPPHSYSLVIGGLCKQRKCME-AYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEE 378
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
LF+ + ++ G EPD V+Y+ ++ G LD L KG+ ++ + + +L+
Sbjct: 379 AMRLFERMKNE-GFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLI 437
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEIN 265
G GR DAE ++E M + YNA +D LA + +AL L G M + +
Sbjct: 438 DGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCD 497
Query: 266 PDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLC-K 324
V+TF LI G E EEA +++ +K I K + P V L LC K
Sbjct: 498 QTVYTFTILIDGLFKEHKNEEAIKFW-------DKMIDKGITPTVASFRALAIGLCLCGK 550
Query: 325 RTFSERCLVDQAPLQLV--------VDRLAKELRVEEAKELVE 359
+ + L D AP+ ++ ++ L K R++EA +L +
Sbjct: 551 VARACKILDDLAPMGIIPETAFEDMINTLCKAQRIKEACKLAD 593
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 120/265 (45%), Gaps = 4/265 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI +G + E V+ M + ++ ++N L+ VNS + + +F+ +
Sbjct: 191 LIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGG- 249
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
I PD V+YN +IK + G L A +ME K ++ D IT+ TL+ YS F
Sbjct: 250 KIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTC 309
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ M + SY+ + GL +++ +A + M K +V + ALI
Sbjct: 310 LSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDS 369
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
+ G++EEA R + + G + + +LV +C+ G LD L ++ ++
Sbjct: 370 YSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAIN 429
Query: 335 QAPLQLVVDRLAKELRVEEAKELVE 359
++D L K R+E+A+ L E
Sbjct: 430 AMFYASLIDGLGKAGRIEDAENLFE 454
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 100/240 (41%), Gaps = 44/240 (18%)
Query: 167 NTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVN 226
N++IK+F + G ++ + M++ GI L T+N L+ G ++ AEK++E M
Sbjct: 189 NSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDG 248
Query: 227 MNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEE 286
+ P+ +YN + G + +KA+E +M K + PD T+ LI+ +E + +
Sbjct: 249 GKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDT 308
Query: 287 AKRWY--------------------------------------NKSGCGMNKAIFKLLVP 308
Y N+ GC N AI+ L+
Sbjct: 309 CLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALID 368
Query: 309 FVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKTNSYCR 368
+ G ++ A L +R +E D ++V+ L K R+++ EL + +CR
Sbjct: 369 SYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFD------FCR 422
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 87/208 (41%), Gaps = 6/208 (2%)
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
++I+ L + +E++ +G+ + N+L+ F + G + +W M
Sbjct: 155 SLIELLTFSADLVKIRLVFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKEN 214
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+ P++ +YN ++GL + A ++ M +I PD T+ +IKG+ G L++A
Sbjct: 215 GIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKA 274
Query: 288 K---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCL-VDQAPLQLVVD 343
R +K + L+ + D D +L ER L + LV+
Sbjct: 275 MEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSL-YLEMEERGLEIPPHSYSLVIG 333
Query: 344 RLAKELRVEEAKELVELGKTNSYCRYNL 371
L K+ + EA + E CR N+
Sbjct: 334 GLCKQRKCMEAYAVFETMNQKG-CRANV 360
>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
Length = 831
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 128/272 (47%), Gaps = 5/272 (1%)
Query: 104 KAAMFENARKVFDEMPG-RNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPD 162
KA A +F M R+ V+S++ L+ + + L+K + L P+
Sbjct: 458 KAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMI-DLNCVPN 516
Query: 163 LVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWE 222
+ +YN + + KG + A + EM G D+IT++TL+ GF + A +++E
Sbjct: 517 VTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFE 576
Query: 223 TMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEG 282
TM++ RPN +YN L GL E + +A EL +M + +PD T+ L+ GF N G
Sbjct: 577 TMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVG 636
Query: 283 NLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQ 339
+E+A +++ G + + L+ G A L + S +C D
Sbjct: 637 KIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHN 696
Query: 340 LVVDRLAKELRVEEAKELVELGKTNSYCRYNL 371
+++D L+K R+++A E+ E + + C +L
Sbjct: 697 IMIDGLSKAKRLDDAVEVFERMEQDHGCSPDL 728
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 126/294 (42%), Gaps = 50/294 (17%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
+I G K + L R +K+ DL N Y + L R I + Q Y
Sbjct: 488 LIDGFCKIDELGRAEKLYKQMIDLNCV-PNVTTYNAFLNGLMRKGR------IADAQGVY 540
Query: 87 KDISKEGFT------ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNS 140
+++ G + + LI + A + A ++F+ M R C +++N LL
Sbjct: 541 EEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKE 600
Query: 141 KKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLIT 200
K DE LF+ + + G +PD V+Y T++ F + G ++ A + EM KG D++
Sbjct: 601 SKPDEAHELFRKMVER-GCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVA 659
Query: 201 FNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLD------------------- 241
+N LL GF+ G+ +A+++++ MV+ +P+ S+N +D
Sbjct: 660 YNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERME 719
Query: 242 -----------------GLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGF 278
GL E++ +A+++ E+ +++PD F L++
Sbjct: 720 QDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAI 773
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 96/240 (40%), Gaps = 41/240 (17%)
Query: 159 IEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLIT------------------ 200
I+P + +++I+ G +DSA +LL M K+G D+ T
Sbjct: 370 IQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQ 429
Query: 201 -------------------FNTLLLGFYSNGRFADAEKIWETMVN-MNVRPNVRSYNARL 240
+N+LL + A I+ TMV+ + P+V SY+ +
Sbjct: 430 EFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILI 489
Query: 241 DGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCG 297
DG + +A +L +M P+V T+ A + G + +G + +A+ Y + +GC
Sbjct: 490 DGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCS 549
Query: 298 MNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
+ + L+ D A L + S C + ++ L KE + +EA EL
Sbjct: 550 PDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHEL 609
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/364 (19%), Positives = 140/364 (38%), Gaps = 50/364 (13%)
Query: 46 KSSDLGRFRTNTGIYTGTVQRLANAKRFRWIE-EILEHQKQYKDISKEGFTARLIALY-- 102
+SS LG F N IY+ ++ ++ ++E E++ + K +E A + L
Sbjct: 51 RSSRLGGFSRNGAIYSSQKKQQQEQQQRGFLELEVVVKKWDGKSSCRETVGAVIKHLRDG 110
Query: 103 GKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPD 162
G+A F F + RN + V ++N LL + + + +F+ + + G+ P+
Sbjct: 111 GEALTF------FRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQ-GVVPN 163
Query: 163 LVSYNTIIKAFVDKGSLDSANTLLYEMEKKG----------------------------- 193
+Y ++++ + + D A EM KG
Sbjct: 164 GFTYAVLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFG 223
Query: 194 ------IRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEK 247
+ ++++ LL+ F + +A K++ MV +P+ Y+ + +
Sbjct: 224 RDLEKRVAVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLE 283
Query: 248 QTKKALELVGEMRSKEINP-DVFTFYALIKGFVNEGNLE---EAKRWYNKSGCGMNKAIF 303
+A +L EM + P + + A + G G +E EA R +S ++ ++
Sbjct: 284 NLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQES-LSSSQPVY 342
Query: 304 KLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKT 363
+L+ + E G +D A C V+ L K RV+ A L+E
Sbjct: 343 DMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIK 402
Query: 364 NSYC 367
YC
Sbjct: 403 RGYC 406
>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
Length = 504
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 125/269 (46%), Gaps = 16/269 (5%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I + K +L V+ F + D G R N Y V L R+ +L
Sbjct: 192 TLIHCLCKNRHLNHAVEIFNQMGDNG-IRPNVVTYNSLVSGLCEIGRWSDAAWLL----- 245
Query: 86 YKDISKEG-------FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACV 138
+D+ K G FTA LI + K A++++ M + V ++ AL+
Sbjct: 246 -RDMMKRGIQPNVITFTA-LIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLC 303
Query: 139 NSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL 198
+ DE +F L G P+ V+Y T+I F ++ + YEM +KG+ +
Sbjct: 304 TYGRLDEARQMFY-LMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANT 362
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
IT+ L+ G+ GR A++++ M + P++R+YN LDGL +KAL +
Sbjct: 363 ITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKY 422
Query: 259 MRSKEINPDVFTFYALIKGFVNEGNLEEA 287
MR +E++ ++ T+ +I+G G +E+A
Sbjct: 423 MRKREMDINIVTYTIIIQGMCKVGKVEDA 451
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 138/308 (44%), Gaps = 7/308 (2%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
S++ G N ++ + F + +G FR N YT + L + EI +Q
Sbjct: 157 SLLHGFCHWNRIEDALALFDQIVGMG-FRPNVVTYTTLIHCLCKNRHLNHAVEIF-NQMG 214
Query: 86 YKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
I T L++ + + +A + +M R + V++F AL+ A V K
Sbjct: 215 DNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIM 274
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
E L+K + ++ + PD+ +Y +I G LD A + Y ME G + +T+ TL
Sbjct: 275 EAKELYKVMI-QMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTL 333
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+ GF + R D KI+ M + N +Y + G + + A E+ +M S+
Sbjct: 334 IHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRA 393
Query: 265 NPDVFTFYALIKGFVNEGNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFN 321
PD+ T+ L+ G G +E+A ++ K +N + +++ +C+ G ++ AF+
Sbjct: 394 PPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFD 453
Query: 322 LCKRTFSE 329
L FS+
Sbjct: 454 LFCSLFSK 461
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 114/262 (43%), Gaps = 4/262 (1%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
F A +F M +++ F LL K+FD V LF+ + LGI P L + N
Sbjct: 63 FNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQM-QILGISPVLYTCN 121
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
++ A+ L +M K G DL+TF +LL GF R DA +++ +V M
Sbjct: 122 IVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGM 181
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
RPNV +Y + L + A+E+ +M I P+V T+ +L+ G G +A
Sbjct: 182 GFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDA 241
Query: 288 K---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDR 344
R K G N F L+ + G + A L K D +++
Sbjct: 242 AWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALING 301
Query: 345 LAKELRVEEAKELVELGKTNSY 366
L R++EA+++ L ++N Y
Sbjct: 302 LCTYGRLDEARQMFYLMESNGY 323
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 114/233 (48%), Gaps = 3/233 (1%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIA-LYGKAAMFENARKVFDEM 118
+T + +A KRF + + E Q Q IS +T ++ +++ A +M
Sbjct: 85 FTRLLSVIAKMKRFDVVISLFE-QMQILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKM 143
Query: 119 PGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGS 178
E +++F +LL + + ++ LF + +G P++V+Y T+I
Sbjct: 144 MKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIV-GMGFRPNVVTYTTLIHCLCKNRH 202
Query: 179 LDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNA 238
L+ A + +M GIR +++T+N+L+ G GR++DA + M+ ++PNV ++ A
Sbjct: 203 LNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTA 262
Query: 239 RLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY 291
+D + +A EL M + PDVFT+ ALI G G L+EA++ +
Sbjct: 263 LIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMF 315
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/212 (20%), Positives = 92/212 (43%), Gaps = 9/212 (4%)
Query: 60 YTGTVQRLANAKRF---RWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFD 116
YT + L R R + ++E Y + E LI + K+ E+ K+F
Sbjct: 295 YTALINGLCTYGRLDEARQMFYLMESNGYYPN---EVTYTTLIHGFCKSKRVEDGTKIFY 351
Query: 117 EMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVD 175
EM + +++ L+ G C+ + D +F + + PD+ +YN ++
Sbjct: 352 EMSQKGLVANTITYTVLIQGYCLVGRP-DVAQEVFNQMGSRRA-PPDIRTYNVLLDGLCY 409
Query: 176 KGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRS 235
G ++ A + M K+ + ++++T+ ++ G G+ DA ++ ++ + ++PNV +
Sbjct: 410 NGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVIT 469
Query: 236 YNARLDGLAIEKQTKKALELVGEMRSKEINPD 267
Y + G +A L +M+ P+
Sbjct: 470 YTTMISGFCRRGFIHEADALFKKMKEDGFLPN 501
Score = 41.6 bits (96), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 68/161 (42%), Gaps = 3/161 (1%)
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
+Y I++ + + A L M ++ F LL RF ++E M
Sbjct: 49 NYRKILRNGLHNLQFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQM 108
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
+ + P + + N ++ + Q +A +G+M PD+ TF +L+ GF + +
Sbjct: 109 QILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRI 168
Query: 285 EEAKRWYNK-SGCGM--NKAIFKLLVPFVCEKGDLDFAFNL 322
E+A +++ G G N + L+ +C+ L+ A +
Sbjct: 169 EDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEI 209
>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 600
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 155/347 (44%), Gaps = 44/347 (12%)
Query: 18 ATGPKFIG--SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRW 75
A+ P I +++R + + + V + D G R + Y ++ L +A
Sbjct: 89 ASRPNAISYTTLMRALCADRRAAQAVGLLRSMQDCG-VRPDVVTYGTLIRGLCDAADVDT 147
Query: 76 IEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLG 135
E+L + + L+ Y K +E+ KVF+EM GR E V+ + AL+
Sbjct: 148 AVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALID 207
Query: 136 ACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIR 195
+ K + + D+ + G+EP++V+YN +I + +GS+ A L M +KG++
Sbjct: 208 SLCRHGKVKKAARVM-DMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQ 266
Query: 196 LDLITFNTLLLGFYSNGRFADAEKIWETMVN--MNVRPNVRSYNARLDGL--------AI 245
D++T+NTL+ G S +A + E M+ VRP++ ++N+ + GL A+
Sbjct: 267 PDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQAL 326
Query: 246 E---------------------------KQTKKALELVGEMRSKEINPDVFTFYALIKGF 278
+ + KKA+EL+ EM S + PD FT+ LI GF
Sbjct: 327 QVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGF 386
Query: 279 VNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
+E A+ + ++ G + L+ +C++G + A +L
Sbjct: 387 CKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDL 433
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 88/175 (50%), Gaps = 1/175 (0%)
Query: 113 KVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKA 172
+V P +S+ L+ A ++ + GL + + G+ PD+V+Y T+I+
Sbjct: 80 RVMSHEPRLASRPNAISYTTLMRALCADRRAAQAVGLLRSM-QDCGVRPDVVTYGTLIRG 138
Query: 173 FVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPN 232
D +D+A LL EM + GI +++ ++ LL G+ GR+ K++E M + P+
Sbjct: 139 LCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPD 198
Query: 233 VRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
V Y A +D L + KKA ++ M + + P+V T+ LI EG++ EA
Sbjct: 199 VVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREA 253
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/233 (20%), Positives = 110/233 (47%), Gaps = 3/233 (1%)
Query: 118 MPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPH-KLGIEPDLVSYNTIIKAFVDK 176
M + + V+++N L+ + + DE L +++ + + PDL+++N++I
Sbjct: 260 MSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKI 319
Query: 177 GSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSY 236
G + A + M + G R +L+ FN L+ G + A ++ + M + ++P+ +Y
Sbjct: 320 GWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTY 379
Query: 237 NARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK--S 294
+ ++G +Q ++A + EMR + + P+ + L+K ++G + +A+ +N+
Sbjct: 380 SILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDR 439
Query: 295 GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAK 347
C ++ A + ++ + G+ A K E + D + ++ AK
Sbjct: 440 NCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAK 492
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 99/203 (48%), Gaps = 8/203 (3%)
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKK---GIRLDLITFNTLLLGFYSNGRFADAE 218
D VSYNT++ A +G LD+A LL M + R + I++ TL+ ++ R A A
Sbjct: 55 DAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAV 114
Query: 219 KIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGF 278
+ +M + VRP+V +Y + GL A+EL+ EM I P+V + L+ G+
Sbjct: 115 GLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGY 174
Query: 279 VNEGNLEEAKRWYNK-SGCGM--NKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCL-VD 334
G E + + + SG G+ + ++ L+ +C G + A + +ER L +
Sbjct: 175 CKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMD-MMTERGLEPN 233
Query: 335 QAPLQLVVDRLAKELRVEEAKEL 357
++++ + KE V EA +L
Sbjct: 234 VVTYNVLINSMCKEGSVREALDL 256
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 114/241 (47%), Gaps = 14/241 (5%)
Query: 52 RFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIA---LYG---KA 105
R R + + + L + W+ + L+ + +++ G L+A L G +
Sbjct: 301 RVRPDLMTFNSVIHGLC---KIGWMRQALQVRAM---MAENGCRCNLVAFNLLIGGLLRV 354
Query: 106 AMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVS 165
+ A ++ DEM + +++ L+ ++ + + ++ H+ G+EP+ V
Sbjct: 355 HKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQ-GMEPEPVH 413
Query: 166 YNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMV 225
Y ++KA D+G + A L EM++ +LD ++T++ G + +G AE+ + M+
Sbjct: 414 YIPLLKAMCDQGMMGQARDLFNEMDRN-CKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMI 472
Query: 226 NMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLE 285
+ + P+ +Y+ ++ A A ++ +M + PDV F +LI+G+ +G+ E
Sbjct: 473 DEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAKGDTE 532
Query: 286 E 286
+
Sbjct: 533 K 533
>gi|115443739|ref|NP_001045649.1| Os02g0110400 [Oryza sativa Japonica Group]
gi|41052925|dbj|BAD07836.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535180|dbj|BAF07563.1| Os02g0110400 [Oryza sativa Japonica Group]
gi|215706484|dbj|BAG93340.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222622028|gb|EEE56160.1| hypothetical protein OsJ_05062 [Oryza sativa Japonica Group]
Length = 747
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 140/287 (48%), Gaps = 7/287 (2%)
Query: 79 ILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACV 138
+L+ + +E A LIA YGKA + + + K+F MP +T LS+NA+L A +
Sbjct: 159 LLDTMPSFSIAPEEATVAALIAAYGKANIPQESVKLFRLMPDLGIARTALSYNAVLKAIL 218
Query: 139 NSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL 198
+ ++ + + PDL +YNT+I F +++A + +M+ G+ D+
Sbjct: 219 CRGREAMARRIYNAMIAD-AVTPDLSTYNTLIWGFGLCKKMEAALRVFGDMKDHGVTPDV 277
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
T+NTLL + G A K+++ M N SYN + G + ++A+ L E
Sbjct: 278 TTYNTLLNAWVRAGDLESARKVFDEMPGAGFAQNSVSYNVMIKGYVEAGKVEEAVGLFSE 337
Query: 259 MRSKEINPDVFTFYALIKGFV-NEGNLEEAKRWYNKSG----CGMNKAIFKLLVPFVCEK 313
M K + TF AL+ G +EG + EA++ + +K++F LV +C
Sbjct: 338 MGEKGLRLSEKTFAALMPGLCDDEGRVVEARKAMDDMAERRLTPKDKSVFLRLVTTLCRA 397
Query: 314 GDLDFAFNLCKRTFS-ERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
GDLD A ++ +++ + LVD ++++ L + + A E+++
Sbjct: 398 GDLDGALDVHQKSGQFKHVLVDPRQYGVLMESLCAGGKCDGAVEVMD 444
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 94/204 (46%), Gaps = 7/204 (3%)
Query: 129 SFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
+F+ L+ + + + + D I P+ + +I A+ + L
Sbjct: 138 TFSLLIPILASHRMLNHARCILLDTMPSFSIAPEEATVAALIAAYGKANIPQESVKLFRL 197
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
M GI +++N +L GR A A +I+ M+ V P++ +YN + G + K+
Sbjct: 198 MPDLGIARTALSYNAVLKAILCRGREAMARRIYNAMIADAVTPDLSTYNTLIWGFGLCKK 257
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKL 305
+ AL + G+M+ + PDV T+ L+ +V G+LE A++ +++ +G N + +
Sbjct: 258 MEAALRVFGDMKDHGVTPDVTTYNTLLNAWVRAGDLESARKVFDEMPGAGFAQNSVSYNV 317
Query: 306 LVPFVCEKGDLDFAFNLCKRTFSE 329
++ E G ++ A L FSE
Sbjct: 318 MIKGYVEAGKVEEAVGL----FSE 337
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 33/171 (19%), Positives = 81/171 (47%), Gaps = 5/171 (2%)
Query: 129 SFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
++N ++ ++ + + F+ L K G++ D ++N++I+ +G ++A +L
Sbjct: 464 AYNPVIEYLCSNGNTSKAETFFRQLMKK-GVD-DKAAFNSLIRGHAKEGVPEAAQEILAI 521
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
M ++G+R D + L+ F ADA+ ++M+ P+ + + + L +
Sbjct: 522 MTRRGVRTDPESHALLVDSFLKKNEPADAKTALDSMMEQGHVPSPSLFMSVMVALFNSGR 581
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGC 296
+ A ++ M K + ++ + +++ G++EEA N ++GC
Sbjct: 582 VQTASRVMKSMIEKGVTENMDMAHKILEALFMRGHVEEAIGRVNLMVENGC 632
>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
Length = 1139
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 119/247 (48%), Gaps = 5/247 (2%)
Query: 127 VLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLL 186
V ++NAL+ +++FD+ D LFK++ + G+EP+ V+Y +I A +G ++ A L
Sbjct: 338 VFAYNALIDKLCKNERFDDADRLFKEMAGR-GLEPNEVTYAILIHALCKRGMIEDALCLF 396
Query: 187 YEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIE 246
+M KGI++ + +N+L+ G+ G A + MV + P SY+ + GL
Sbjct: 397 DKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRN 456
Query: 247 KQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIF 303
+EL EM + I + +TF ALI GF + ++EA R ++K S N+ F
Sbjct: 457 GDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTF 516
Query: 304 KLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKT 363
+++ C G++ AF L + D + ++ L V +A E V
Sbjct: 517 NVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVA-DLE 575
Query: 364 NSYCRYN 370
NSY N
Sbjct: 576 NSYAVLN 582
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 111/245 (45%), Gaps = 2/245 (0%)
Query: 46 KSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKA 105
K DLG N Y + +L +RF + + + E A LI K
Sbjct: 328 KLGDLGMV-PNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKR 386
Query: 106 AMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVS 165
M E+A +FD+M + + TV +N+L+ D GL + K G+ P S
Sbjct: 387 GMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMV-KEGLTPTAAS 445
Query: 166 YNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMV 225
Y+ +I G L S L EM ++GI + TF L+ GF + + +A ++++ M+
Sbjct: 446 YSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMI 505
Query: 226 NMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLE 285
+ NV PN ++N ++G + +KA +L +M + PD +T+ +LI G +
Sbjct: 506 DSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVS 565
Query: 286 EAKRW 290
+A +
Sbjct: 566 KANEF 570
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 102/231 (44%), Gaps = 3/231 (1%)
Query: 129 SFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
S ALL +F E L+ ++ + G++ DLVS+ I+ A + + + + L E
Sbjct: 585 SLTALLYGFFREGRFTETYHLWDEMAVR-GVKLDLVSFTIIVYAALKQHDKEKSCVLFRE 643
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
M+++G++ D I + ++ A W+ MV PN ++ ++ L
Sbjct: 644 MKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGY 703
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKAI--FKLL 306
A L EM + + P+ FT+ + F EG++E+AK ++ G +I F +L
Sbjct: 704 LGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNIL 763
Query: 307 VPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
+ +C+ G + A +L + D ++ L K + +A EL
Sbjct: 764 IKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFEL 814
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 128/301 (42%), Gaps = 43/301 (14%)
Query: 99 IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKL 157
I Y ++ + AR + M + + + +N L+ G C N + + V+ K++ +
Sbjct: 205 IRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVE--VKNVMVNI 262
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSA-------------------NTLLYEMEKK------ 192
G+ D V+Y T++ F L+ A + ++ E+ KK
Sbjct: 263 GVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEA 322
Query: 193 ----------GIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDG 242
G+ ++ +N L+ N RF DA+++++ M + PN +Y +
Sbjct: 323 FSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHA 382
Query: 243 LAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMN 299
L + AL L +MR K I V+ + +LI G+ +G+L+ A+ + K G
Sbjct: 383 LCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPT 442
Query: 300 KAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV-DQAPLQLVVDRLAKELRVEEAKELV 358
A + L+ +C GDL L R +ER + + +++ K+ +++EA L
Sbjct: 443 AASYSPLIAGLCRNGDLSSCMEL-HREMAERGIAWNNYTFTALINGFCKDKKMDEAARLF 501
Query: 359 E 359
+
Sbjct: 502 D 502
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 110/253 (43%), Gaps = 41/253 (16%)
Query: 148 GLFKDLPHKL---GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
L +DL K+ G+ D Y I+A+ + +LD A L+ ME +G++ + +N L
Sbjct: 180 ALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVL 239
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALE---------- 254
+ G N R +A ++ MVN+ V + +Y + G ++ + AL
Sbjct: 240 MYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGF 299
Query: 255 ---------LVGEMRSKEI----------------NPDVFTFYALIKGFVNEGNLEEAKR 289
++ E+R KE+ P+VF + ALI ++A R
Sbjct: 300 VPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADR 359
Query: 290 WYNK-SGCGM--NKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLA 346
+ + +G G+ N+ + +L+ +C++G ++ A L + + V P +++
Sbjct: 360 LFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYC 419
Query: 347 KELRVEEAKELVE 359
K+ ++ A+ L+
Sbjct: 420 KQGSLDRARGLLS 432
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 1/120 (0%)
Query: 126 TVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTL 185
+++SFN L+ + K E L + G PD +SY+TII G ++ A L
Sbjct: 756 SIVSFNILIKGLCKAGKIQEAIDLMSKITES-GFSPDCISYSTIIHELCKMGDINKAFEL 814
Query: 186 LYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAI 245
EM KG++ D++ +N + +G A I+ M+ V+PN +Y A L G+++
Sbjct: 815 WNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISL 874
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 63/130 (48%), Gaps = 2/130 (1%)
Query: 151 KDLPHKL--GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
KDL + G +VS+N +IK G + A L+ ++ + G D I+++T++
Sbjct: 743 KDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHEL 802
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDV 268
G A ++W M+ ++P+V +YN + + ++ KAL + M + P+
Sbjct: 803 CKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNW 862
Query: 269 FTFYALIKGF 278
T+ AL+ G
Sbjct: 863 DTYRALLSGI 872
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 69/164 (42%), Gaps = 4/164 (2%)
Query: 159 IEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAE 218
+ P+ +YN + F +G ++ A L M +G +++FN L+ G G+ +A
Sbjct: 719 VLPNKFTYNCFLDYFATEGDMEKAKDLHSAM-LQGHLASIVSFNILIKGLCKAGKIQEAI 777
Query: 219 KIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGF 278
+ + P+ SY+ + L KA EL EM K + PDV + I+
Sbjct: 778 DLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWC 837
Query: 279 VNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFA 319
G ++A Y +SG N ++ L+ + DF+
Sbjct: 838 NVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLMLHYDFS 881
Score = 38.1 bits (87), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 72/185 (38%), Gaps = 7/185 (3%)
Query: 193 GIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKA 252
GI ++ T + +L +FA A +++ M+ V + Y A + + A
Sbjct: 158 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 217
Query: 253 LELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPF 309
LV M S+ + + L+ G ++EA N G ++ ++ LV
Sbjct: 218 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYG 277
Query: 310 VCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV----ELGKTNS 365
C +L+ A + + +A ++D L K+ VEEA L +LG +
Sbjct: 278 FCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPN 337
Query: 366 YCRYN 370
YN
Sbjct: 338 VFAYN 342
>gi|410109887|gb|AFV61023.1| pentatricopeptide repeat-containing protein 11, partial [Junellia
succulentifolia]
Length = 429
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 140/313 (44%), Gaps = 4/313 (1%)
Query: 5 SRLLSCSFSTTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTV 64
S + + T T ++ S I Y E+ R + + + +FR +
Sbjct: 53 SAVFAAILETKGTQRSDIYVFSGIITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVL 112
Query: 65 QRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCE 124
+ L K F+ + E + + F L+ + K A+ VFD +
Sbjct: 113 EHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLR 172
Query: 125 QTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANT 184
+V+SFN L+ + +E L K + G++PD+ +Y+ +I + +D N
Sbjct: 173 PSVVSFNTLMNGYIKLGDLNEXFRLKKAMQAS-GVQPDVYTYSVLINGLCKESKMDDXNE 231
Query: 185 LLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLA 244
L EM G+ + +TF TL+ G NGR A +I++ M++ ++ P++ +YN + GL
Sbjct: 232 LFDEMLDXGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLVTYNTLIYGLC 291
Query: 245 IEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKA 301
+ K+A +L+ EM K + PD T+ LI G EG+LE A + K ++
Sbjct: 292 KKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRXRMIKENIRLDDV 351
Query: 302 IFKLLVPFVCEKG 314
+ L+ +C++G
Sbjct: 352 AYTALISGLCQEG 364
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 87/180 (48%), Gaps = 1/180 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K + A +++ +M ++ ++++N L+ + L ++ K
Sbjct: 251 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDEMSMK- 309
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD ++Y T+I +G L++A M K+ IRLD + + L+ G GR DA
Sbjct: 310 GLKPDKITYTTLIDGSCKEGDLETAFEYRXRMIKENIRLDDVAYTALISGLCQEGRSVDA 369
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
EK+ M+++ ++P + +Y ++ + +L+ EM+ P V T+ L+ G
Sbjct: 370 EKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVTYNVLMNG 429
>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 680
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 127/254 (50%), Gaps = 6/254 (2%)
Query: 110 NARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
+A ++ EM R +++++AL+ G C+ K D + GLF + + I PD+ ++N
Sbjct: 228 DAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAI-GLFNKMTSE-NINPDVYTFNI 285
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
++ AF +G + A L M K+GI+ D++T+N+L+ G+ A+ I TM +
Sbjct: 286 LVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRG 345
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLE--- 285
V VRSYN ++G K +A++L EM K+I P+V T+ +LI G G +
Sbjct: 346 VTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYAL 405
Query: 286 EAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRL 345
E + G + + ++ +C+ +D A L + + + +++D L
Sbjct: 406 ELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGL 465
Query: 346 AKELRVEEAKELVE 359
K R+E+A+ + E
Sbjct: 466 CKGGRLEDARNIFE 479
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 139/312 (44%), Gaps = 22/312 (7%)
Query: 53 FRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENAR 112
F +++ + +V R++ K+F H Q+ + + F I + + F N
Sbjct: 2 FHSSSSMLLRSVFRVSVPKKF--------HPFQFPENTHFYF----IHSFSTSTTFHNNN 49
Query: 113 KVFDEMPGRNC------EQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSY 166
V D + NC + F +LG+ V SK + V LF+ + ++ GI+P+ V++
Sbjct: 50 DVVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYR-GIKPNFVNF 108
Query: 167 NTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVN 226
N +I F G + A ++L ++ K G D IT NT + GF G+ A + +V
Sbjct: 109 NILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVA 168
Query: 227 MNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEE 286
+ + SY ++GL +T+ ALEL+ + K + DV + +I + N+ +
Sbjct: 169 LGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVND 228
Query: 287 AKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVD 343
A Y++ N + L+ C G L A L + SE D ++VD
Sbjct: 229 AFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVD 288
Query: 344 RLAKELRVEEAK 355
KE RV+EAK
Sbjct: 289 AFCKEGRVKEAK 300
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 99/207 (47%), Gaps = 7/207 (3%)
Query: 89 ISKEGFTARL------IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKK 142
+S G TA + I + K M + A K+F EM + V+++N+L+ S +
Sbjct: 341 MSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGR 400
Query: 143 FDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFN 202
L DL H G +PD+++Y++I+ A +D A LL +++ +GIR ++ T+
Sbjct: 401 ISYALELI-DLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYT 459
Query: 203 TLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
L+ G GR DA I+E ++ V +Y + G +AL L+ +M+
Sbjct: 460 ILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDN 519
Query: 263 EINPDVFTFYALIKGFVNEGNLEEAKR 289
PD T+ +I ++ ++A++
Sbjct: 520 SCIPDAITYEIIICSLFDKDENDKAEK 546
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K E+AR +F+++ + TV ++ ++ + FDE L + I PD
Sbjct: 467 KGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCI-PDA 525
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
++Y II + DK D A LL EM +G+ + + + L F
Sbjct: 526 ITYEIIICSLFDKDENDKAEKLLREMITRGLLYSFLEYGSWSLSF 570
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 85/202 (42%), Gaps = 8/202 (3%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILE--HQK 84
VI G K + + + FK+ F N Y + L + R + E+++ H +
Sbjct: 356 VINGFCKIKMVDQAMKLFKEMHHKQIF-PNVITYNSLIDGLCKSGRISYALELIDLMHDR 414
Query: 85 -QYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKF 143
Q DI +++ L AL K + + A + ++ + + ++ L+ +
Sbjct: 415 GQQPDIIT--YSSILDAL-CKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRL 471
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT 203
++ +F+DL K G + +Y +I+ F G D A +LL +M+ D IT+
Sbjct: 472 EDARNIFEDLLVK-GYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEI 530
Query: 204 LLLGFYSNGRFADAEKIWETMV 225
++ + AEK+ M+
Sbjct: 531 IICSLFDKDENDKAEKLLREMI 552
>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1043
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 136/280 (48%), Gaps = 4/280 (1%)
Query: 78 EILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGAC 137
++LE K+++ I L+ GKA + A + EM + CE +V+++++L+ +
Sbjct: 549 KLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASF 608
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLD 197
+ +E LF ++ K G D+ +Y+ +I +D A + M+++G+
Sbjct: 609 YKRDQEEESLSLFDEMVRK-GCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPL 667
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
L + TLL + + A +I+ + ++ P+ YN ++GL + +A +LV
Sbjct: 668 LGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVD 727
Query: 258 EMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKG 314
M+++ I PD+FT+ +L+ G G LEEA + K G + + L+ + + G
Sbjct: 728 SMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGG 787
Query: 315 DLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA 354
L A + + +RC+ D ++D L KE RVEEA
Sbjct: 788 KLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEA 827
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 117/254 (46%), Gaps = 4/254 (1%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
+ A VF M E + ++ LL + V +K D +F +L + + PD YN
Sbjct: 650 DQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNEL-QESSLVPDTFVYNI 708
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
++ V +D A L+ M+ + I DL T+ +LL G +GR +A ++ M
Sbjct: 709 MVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEG 768
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
P+V +Y + +D L + AL + M K PDV T+ +LI EG +EEA
Sbjct: 769 HEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAY 828
Query: 289 RWYNKS---GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRL 345
++ S GC N ++ L+ +KG +D A L + +C + ++ L
Sbjct: 829 YFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGL 888
Query: 346 AKELRVEEAKELVE 359
AK R+ A++L+E
Sbjct: 889 AKAGRLNVAEKLLE 902
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 156/403 (38%), Gaps = 73/403 (18%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
+I + K N+ F +L R N YT V LA A R E+ K+
Sbjct: 328 LIDALVKSGNIDEACKFFNGMKNL-RCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKE- 385
Query: 87 KDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
+ S + LI GKA + A +F EM R + ++N ++ + + E
Sbjct: 386 NNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPE 445
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIR---------- 195
LF DL + G PD+ +YNT+I G +D ++ EM +KG
Sbjct: 446 AWQLFHDLKEQ-GAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAG 504
Query: 196 ---------------------LDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVR 234
L IT+NTL+ F NG +A K+ E M P V
Sbjct: 505 HEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVV 564
Query: 235 SYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN-- 292
+Y +DGL + +A+ L+ EM + P V T+ +L+ F EE+ ++
Sbjct: 565 TYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEM 624
Query: 293 -KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRT------------------------- 326
+ GC + + + L++ +C+ D+D A ++ R
Sbjct: 625 VRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKI 684
Query: 327 ---------FSERCLV-DQAPLQLVVDRLAKELRVEEAKELVE 359
E LV D ++V+ L K RV+EA +LV+
Sbjct: 685 DFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVD 727
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 127/275 (46%), Gaps = 20/275 (7%)
Query: 27 VIRGIYKENNLK---RLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQ 83
++ G+ K N + +LVD K + L T YT + L + R E
Sbjct: 709 MVNGLVKSNRVDEACKLVDSMKNQNILPDLFT----YTSLLDGLGKSGRLE------EAF 758
Query: 84 KQYKDISKEGFTARLIA------LYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGAC 137
+ +++EG ++A + GK +A +F M + C V+++++L+ +
Sbjct: 759 NMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSL 818
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLD 197
+ +E F++ K G P++ Y+++I +F KG +D A L EM+++ +
Sbjct: 819 GKEGRVEEAYYFFENSISK-GCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPN 877
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
++T+N LL G GR AEK+ E M + P++ +YN +DG+ +A
Sbjct: 878 IVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFK 937
Query: 258 EMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN 292
M+ K I PDV TF +LI+ L EA ++
Sbjct: 938 RMKEKGIVPDVITFTSLIESLGKVDKLLEACELFD 972
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 93/179 (51%), Gaps = 1/179 (0%)
Query: 93 GFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKD 152
G + LI +GK M + A ++F+EM R C ++++N LL + + + + L ++
Sbjct: 844 GVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEE 903
Query: 153 LPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNG 212
+ K+G PDLV+YN +I G +D A + M++KGI D+ITF +L+
Sbjct: 904 M-EKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVD 962
Query: 213 RFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTF 271
+ +A +++++M P+V +YN +D L + +A + EM+ K PD T
Sbjct: 963 KLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGITI 1021
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 138/317 (43%), Gaps = 10/317 (3%)
Query: 53 FRTNTGIYTGTVQRLANAKRFRWIEEILEHQ-KQYKDISKEGFTARLIALYGKAAMFENA 111
+ G YT ++RLA A+ + +IL K+ IS T+ L+ +G A
Sbjct: 178 YSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTS-LLRTFGSTNNVSGA 236
Query: 112 RKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIK 171
++F++M C + +N +L V + +F L + I+PD ++ +
Sbjct: 237 LEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLG-QFRIQPDAQTFRIFVH 295
Query: 172 AFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRP 231
+F G LD A + EM K GI + TF L+ +G +A K + M N+ P
Sbjct: 296 SFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSP 355
Query: 232 NVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY 291
NV +Y ++GLA + ++A E+ EM+ +PD + LI G G + A +
Sbjct: 356 NVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLF 415
Query: 292 NK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKE 348
+ G N + +++ + + G A+ L + + D ++D L K
Sbjct: 416 KEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKG 475
Query: 349 LRVEEA----KELVELG 361
++++ KE+VE G
Sbjct: 476 GQMDKVLAIIKEMVEKG 492
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 114/230 (49%), Gaps = 4/230 (1%)
Query: 128 LSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLY 187
+++N L+ A +++ DE L + + I P +V+Y T++ G LD A +LL
Sbjct: 529 ITYNTLMSAFIHNGHVDEAVKLLEVMKKHECI-PTVVTYTTLVDGLGKAGRLDEAVSLLR 587
Query: 188 EMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEK 247
EMEK+G ++T+++L+ FY + ++ +++ MV +V +Y+ ++ L
Sbjct: 588 EMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSD 647
Query: 248 QTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFK 304
+AL++ G M+ + + P + + L+ V + ++ A + +N +S + ++
Sbjct: 648 DVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYN 707
Query: 305 LLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA 354
++V + + +D A L ++ L D ++D L K R+EEA
Sbjct: 708 IMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEA 757
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 105/259 (40%), Gaps = 6/259 (2%)
Query: 112 RKVFDEMPGRNCEQTVLSFNALL--GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTI 169
R+ +D G+ E+ N L VN K F + G + +Y +
Sbjct: 129 RRKWDAEMGKQLERLKFKLNPGLVCDVVVNQKDLHLAKCFFTWAGQQDGYSHTVGTYTLM 188
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
IK D+ +L M K+G R+ + +LL F S + A +I+ M +
Sbjct: 189 IKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGALEIFNQMKSFGC 248
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
P+ YN L+ L A+ + G++ I PD TF + F G L+ A
Sbjct: 249 NPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRLDPAAE 308
Query: 290 WYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLA 346
KSG F +L+ + + G++D A + RC + +V+ LA
Sbjct: 309 PIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLA 368
Query: 347 KELRVEEAKEL-VELGKTN 364
K R+EEA E+ VE+ + N
Sbjct: 369 KAGRLEEACEVFVEMKENN 387
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 62/149 (41%), Gaps = 1/149 (0%)
Query: 56 NTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVF 115
N Y + LA A R E++LE ++ + LI GK M + A F
Sbjct: 877 NIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYF 936
Query: 116 DEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVD 175
M + V++F +L+ + K E LF + + G P +V+YN +I
Sbjct: 937 KRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEE-GYNPSVVTYNVLIDILGR 995
Query: 176 KGSLDSANTLLYEMEKKGIRLDLITFNTL 204
G + A + +EM+ KG D IT +
Sbjct: 996 AGKVHEAAMIFHEMKVKGCMPDGITIGIM 1024
>gi|147797621|emb|CAN62945.1| hypothetical protein VITISV_002230 [Vitis vinifera]
Length = 912
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 140/322 (43%), Gaps = 15/322 (4%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMP 119
Y L + F +L+ + D + A+ + YG A F
Sbjct: 154 YVAITDLLISHGLFSTASSLLQSHHRLSDFA----AAKFVKAYGDRGDIRGAIHWFHRAK 209
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL 179
+ + S+NA+LG V + + +F + + ++PD+ +Y TII+ + G +
Sbjct: 210 KMESGRCLFSYNAILGVFVKANRIMLARAVFDQIVKEGVVKPDVSTYTTIIRGYCKMGMI 269
Query: 180 DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM-NVRPNVRSYNA 238
++A + EM G + +L+T+NT++ GF G A KI + M + P+ +Y
Sbjct: 270 ENAKNVFDEM---GCKPNLVTYNTMINGFCKKGLMESAMKIVDQMTETEDCMPDTVTYTT 326
Query: 239 RLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SG 295
+DG + ++A++ + EM S+ P+V T+ A+I G GN++EAKR + +G
Sbjct: 327 LIDGYCKRGELEEAMKYMEEMVSRNCEPNVLTYNAIIYGLCLNGNVDEAKRMMTRMRLNG 386
Query: 296 CGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA- 354
N A ++ +C G LD A K D +VV+ K + ++A
Sbjct: 387 LKDNVATHTSILKGLCVVGKLDDAARHLKEMVGLGMEADAKAYGVVVNEYCKIGKADDAI 446
Query: 355 ---KELVELGKTNSYCRYNLKF 373
KE+ G S +N F
Sbjct: 447 SLLKEMKSRGINPSVSSFNAVF 468
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 106/251 (42%), Gaps = 38/251 (15%)
Query: 78 EILEHQKQYKDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-G 135
+I++ + +D + T LI Y K E A K +EM RNCE VL++NA++ G
Sbjct: 306 KIVDQMTETEDCMPDTVTYTTLIDGYCKRGELEEAMKYMEEMVSRNCEPNVLTYNAIIYG 365
Query: 136 ACVNSK----------------------------------KFDEVDGLFKDLPHKLGIEP 161
C+N K D+ K++ LG+E
Sbjct: 366 LCLNGNVDEAKRMMTRMRLNGLKDNVATHTSILKGLCVVGKLDDAARHLKEMV-GLGMEA 424
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
D +Y ++ + G D A +LL EM+ +GI + +FN + +G+ A I
Sbjct: 425 DAKAYGVVVNEYCKIGKADDAISLLKEMKSRGINPSVSSFNAVFRILVESGKTDKAGLIL 484
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEK-QTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
M + PN SY+ +DGL K + + E V +M + D + L+KG+
Sbjct: 485 RQMKQLGCTPNFLSYSTVIDGLCKAKGRMHEVEEFVDDMCRNGHHLDASMYSWLVKGYCE 544
Query: 281 EGNLEEAKRWY 291
+GN + A R +
Sbjct: 545 DGNADMAMRLF 555
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 115/236 (48%), Gaps = 10/236 (4%)
Query: 98 LIALYGKAAMFENARKVFDEMP-GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHK 156
+I + K + E+A K+ D+M +C +++ L+ + +E +++ +
Sbjct: 291 MINGFCKKGLMESAMKIVDQMTETEDCMPDTVTYTTLIDGYCKRGELEEAMKYMEEMVSR 350
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
EP++++YN II G++D A ++ M G++ ++ T ++L G G+ D
Sbjct: 351 -NCEPNVLTYNAIIYGLCLNGNVDEAKRMMTRMRLNGLKDNVATHTSILKGLCVVGKLDD 409
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
A + + MV + + + ++Y ++ + A+ L+ EM+S+ INP V +F A+ +
Sbjct: 410 AARHLKEMVGLGMEADAKAYGVVVNEYCKIGKADDAISLLKEMKSRGINPSVSSFNAVFR 469
Query: 277 GFVNEGNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCE-KGDL----DFAFNLCK 324
V G ++A R + GC N + ++ +C+ KG + +F ++C+
Sbjct: 470 ILVESGKTDKAGLILRQMKQLGCTPNFLSYSTVIDGLCKAKGRMHEVEEFVDDMCR 525
>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Vitis vinifera]
Length = 879
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 149/339 (43%), Gaps = 7/339 (2%)
Query: 23 FIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEIL-E 81
F ++I G K+ +++ + + L F Y + F+ I+ +L E
Sbjct: 241 FYNTLIDGYCKKGDME-MANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLME 299
Query: 82 HQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSK 141
+ ++ + + + A Y K A + + M C+ ++++N L+
Sbjct: 300 MNSRGLTVNVQVYNTIIDARY-KHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDG 358
Query: 142 KFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITF 201
K E D L + K G+ P+ SY +I A+ +G D A+ L EM ++G + DL+T+
Sbjct: 359 KVSEADQLLEQALGK-GLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTY 417
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS 261
L+ G G A I E M+ V P+ YN + GL + + A L+ EM
Sbjct: 418 GALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLD 477
Query: 262 KEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS-GCGMNKAI--FKLLVPFVCEKGDLDF 318
+ + PD F + L+ GF+ GNL+EA++ + + GMN I + ++ C+ G +
Sbjct: 478 QSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKD 537
Query: 319 AFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
A R D+ V+D K+ ++ A+++
Sbjct: 538 AMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKM 576
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 149/338 (44%), Gaps = 7/338 (2%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I YK ++ + V+ + + G + + Y + + +++LE Q
Sbjct: 314 TIIDARYKHGHIVKAVETIEGMIECG-CKPDIVTYNTLISGSCRDGKVSEADQLLE-QAL 371
Query: 86 YKDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
K + F+ LI Y K ++ A EM R + ++++ AL+ V + + D
Sbjct: 372 GKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVD 431
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
+ + + + G+ PD YN ++ K L +A LL EM + + D + TL
Sbjct: 432 VALTIREKMLER-GVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATL 490
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+ GF NG +A K++E + + P + YNA + G K A+ + M+ + +
Sbjct: 491 VDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHL 550
Query: 265 NPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFN 321
PD FT+ +I G+V + +L+ A++ + K C N + L+ C KGDL +
Sbjct: 551 APDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLK 610
Query: 322 LCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ + + + + +++ KE ++ +A E
Sbjct: 611 IFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFE 648
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 123/295 (41%), Gaps = 39/295 (13%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K E RK+ ++ G+ C ++ +N L+ + +GLF +L K G P +
Sbjct: 216 KEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLK-GFLPTV 274
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
+Y II F KG + + LL EM +G+ +++ +NT++ Y +G A + E
Sbjct: 275 ETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEG 334
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M+ +P++ +YN + G + + +A +L+ + K + P+ F++ LI + +G
Sbjct: 335 MIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGG 394
Query: 284 LEEAKRW---------------YNKSGCGM-----------------------NKAIFKL 305
+ A W Y G+ + I+ +
Sbjct: 395 YDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNI 454
Query: 306 LVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVEL 360
L+ +C+K L A L + L D +VD + ++EA++L EL
Sbjct: 455 LMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFEL 509
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 106/232 (45%), Gaps = 10/232 (4%)
Query: 98 LIALYGKAAMFENARKVFDEM-----PGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKD 152
L+ + K E ARK++DEM G C + + G C K +E L +D
Sbjct: 171 LLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCIMVKGLC-KEGKLEEGRKLIED 229
Query: 153 LPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNG 212
+ G P+++ YNT+I + KG ++ AN L E++ KG + T+ ++ GF G
Sbjct: 230 RWGQ-GCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKG 288
Query: 213 RFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFY 272
F +++ M + + NV+ YN +D KA+E + M PD+ T+
Sbjct: 289 DFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYN 348
Query: 273 ALIKGFVNEGNLEEAKRWYNKS---GCGMNKAIFKLLVPFVCEKGDLDFAFN 321
LI G +G + EA + ++ G NK + L+ C++G D A N
Sbjct: 349 TLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASN 400
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 98/200 (49%), Gaps = 4/200 (2%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A+ + EM ++ + L+ + + DE LF +L + G+ P +V YN +I
Sbjct: 468 AKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLF-ELTIEKGMNPGIVGYNAMI 526
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
K + G + A + M+K+ + D T++T++ G+ A+K++ MV M +
Sbjct: 527 KGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCK 586
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
PNV +Y + ++G + ++L++ EM++ + P+V T+ LI F E L +A +
Sbjct: 587 PNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASF 646
Query: 291 YNK---SGCGMNKAIFKLLV 307
+ + + C N F LV
Sbjct: 647 FEEMLMNKCVPNDVTFNYLV 666
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 121/287 (42%), Gaps = 32/287 (11%)
Query: 96 ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLP 154
A L+ + + + ARK+F+ + ++ +NA++ G C KF G+ KD
Sbjct: 488 ATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYC----KF----GMMKDAM 539
Query: 155 ------HKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
K + PD +Y+T+I +V + LD A + EM K + +++T+ +L+ GF
Sbjct: 540 ACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGF 599
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDV 268
G + KI+ M + PNV +Y+ + E + A EM + P+
Sbjct: 600 CRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPND 659
Query: 269 FTFYALIKGFVNEGN---------LEEAKR--WYN------KSGCGMNKAIFKLLVPFVC 311
TF L+ GF G +E K+ + N G A + ++ +C
Sbjct: 660 VTFNYLVNGFSKNGTRAISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSILICLC 719
Query: 312 EKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
+ G A L + S+ C+ D ++ + E R +E K +V
Sbjct: 720 QYGMFRTALQLSNKMTSKGCIPDSVSFVALLHGVCLEGRSKEWKNIV 766
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 113/279 (40%), Gaps = 46/279 (16%)
Query: 129 SFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
++++LL S+ F E++ + +++ + + P + + +I+A+ D G ++ A L Y
Sbjct: 96 AYSSLLKLLARSRVFSEMEVVLENMRVE-EMSPTREAMSIVIQAYSDSGLVEKALELYYF 154
Query: 189 MEKKGIRL-DLITFNTLLLGFYSNGRFADAEKIWETMVNMN------------------- 228
+ K D+I N+LL GR A K+++ M+ ++
Sbjct: 155 VLKTYTYFPDVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCIMVKGL 214
Query: 229 --------------------VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDV 268
PN+ YN +DG + + A L E++ K P V
Sbjct: 215 CKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTV 274
Query: 269 FTFYALIKGFVNEGNLEEAKRW---YNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKR 325
T+ A+I GF +G+ + R N G +N ++ ++ + G + A +
Sbjct: 275 ETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEG 334
Query: 326 TFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE--LGK 362
C D ++ ++ +V EA +L+E LGK
Sbjct: 335 MIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGK 373
Score = 38.9 bits (89), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 86/217 (39%), Gaps = 18/217 (8%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
+VI G K+++L F++ + + + N YT + +I +
Sbjct: 559 TVIDGYVKQHDLDGAQKMFREMVKM-KCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQA 617
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL------GACVN 139
+ + LI + K A +A F+EM C ++FN L+ G
Sbjct: 618 CGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAI 677
Query: 140 SKKFDEVD----GLFKDLPHKL---GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKK 192
S+K +E +F + ++ G P +YN+I+ G +A L +M K
Sbjct: 678 SEKGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQLSNKMTSK 737
Query: 193 GIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
G D ++F LL G GR K W+ +V+ N+
Sbjct: 738 GCIPDSVSFVALLHGVCLEGR----SKEWKNIVSCNL 770
>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
[Oryza sativa Japonica Group]
Length = 571
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 119/237 (50%), Gaps = 6/237 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI Y K + A +VF+EM + +V+++N+L+ + K +E L +++ L
Sbjct: 270 LINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEM-EDL 328
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ P+ +++ ++K F KG + AN + M ++ + D++ +N L+ + G+ DA
Sbjct: 329 GLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDA 388
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ E M + PNV +YN + G + + A L+ EM+ K I DV T+ LI
Sbjct: 389 MAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGA 448
Query: 278 FVNEGNLEEAKRWYNKS---GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERC 331
+G + +A + ++ G N + ++ C+KG++ A+ + RT E+C
Sbjct: 449 LCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEI--RTRMEKC 503
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 104/224 (46%), Gaps = 6/224 (2%)
Query: 103 GKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEP 161
G A + + EM T ++F L+ G C NS V +F+++ + GI
Sbjct: 240 GGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVR-VFEEMKQQ-GIAA 297
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
+V+YN++I +G ++ L+ EME G+ + ITF +L GF G ADA
Sbjct: 298 SVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWI 357
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
+ M NV P+V YN +D + + A+ + M K I+P+V T+ LI GF
Sbjct: 358 DGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRS 417
Query: 282 GNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
G+ A + + G + + +L+ +C KG++ A L
Sbjct: 418 GDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKL 461
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 126/279 (45%), Gaps = 14/279 (5%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFR---TNTGIYTGTVQRLANAKRFRWIEEILEH 82
S+I G+ E ++ V ++ DLG T + G ++ A WI+ + E
Sbjct: 304 SLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTER 363
Query: 83 QKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKK 142
+ D+ LI +Y + E+A V + M + V ++N L+ S
Sbjct: 364 NVE-PDVVIYNI---LIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGD 419
Query: 143 FDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFN 202
+ GL ++ K GIE D+V+YN +I A KG + A LL EM + G+ + +T+N
Sbjct: 420 WRSASGLLDEMKEK-GIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYN 478
Query: 203 TLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
T++ GF G A +I M R NV +YN + + +A +L+ EM K
Sbjct: 479 TIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDK 538
Query: 263 EINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKA 301
+ P+ T+ + +G + +G + + GC +++A
Sbjct: 539 CLVPNGITYETIKEGMMEKGYTPDIR------GCTVSQA 571
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 88/202 (43%), Gaps = 39/202 (19%)
Query: 129 SFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSA------ 182
S NALL V +K+ D + F+ + + PD+ ++NT+I G L A
Sbjct: 158 SVNALLAGLVGAKRVDLAEKAFRSALRRR-VSPDIYTFNTVISGLCRIGQLRKAGDVAKD 216
Query: 183 --------------------------------NTLLYEMEKKGIRLDLITFNTLLLGFYS 210
+ LL EM + GI +TF L+ G+
Sbjct: 217 IKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCK 276
Query: 211 NGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
N A A +++E M + +V +YN+ + GL E + ++ ++L+ EM ++P+ T
Sbjct: 277 NSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEIT 336
Query: 271 FYALIKGFVNEGNLEEAKRWYN 292
F ++KGF +G + +A W +
Sbjct: 337 FGCVLKGFCKKGMMADANDWID 358
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 69/168 (41%), Gaps = 6/168 (3%)
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
P S N ++ V +D A ++ + D+ TFNT++ G G+ A +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALE---LVGEMRSKEINPDVFTFYALIKG 277
+ + + P+V +YN+ +DG + L+ EM I+P TF LI G
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273
Query: 278 FVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
+ N A R + + G + + L+ +C +G ++ L
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKL 321
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 74/166 (44%), Gaps = 6/166 (3%)
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
+ N LL G R AEK + + + V P++ ++N + GL Q +KA ++ ++
Sbjct: 158 SVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDI 217
Query: 260 RSKEINPDVFTFYALIKGFVNEG------NLEEAKRWYNKSGCGMNKAIFKLLVPFVCEK 313
++ + P V T+ +LI G+ +G +++ + ++G F +L+ C+
Sbjct: 218 KAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKN 277
Query: 314 GDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ A + + + ++ L E +VEE +L+E
Sbjct: 278 SNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLME 323
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 11/92 (11%)
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA-- 287
RP+ S NA L GL K+ A + + ++PD++TF +I G G L +A
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212
Query: 288 -----KRWYNKSGCGMNKAIFKLLVPFVCEKG 314
K W G + A + L+ C+KG
Sbjct: 213 VAKDIKAW----GLAPSVATYNSLIDGYCKKG 240
>gi|326493766|dbj|BAJ85345.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 671
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 128/272 (47%), Gaps = 10/272 (3%)
Query: 54 RTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARK 113
+ NT Y ++ L A+R+ + +++ + + E + L + + + + A +
Sbjct: 311 KPNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCLPNEATFSMLTSCLCQNGLVDCAME 370
Query: 114 VFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAF 173
V ++M C + +N L+ + + D+ L +P PD++S+N +K
Sbjct: 371 VLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKLLNSMP----CSPDVISFNAALKGL 426
Query: 174 VDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNV 233
D A L+ +M ++ L +TFN L+ NGR +A +++E M P++
Sbjct: 427 CRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQNGRVNNAIEVFEQMPKYGCTPDI 486
Query: 234 RSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN- 292
+Y++ ++GL+ + + A+EL M K PD+F + A++KG E+A +
Sbjct: 487 VTYSSLINGLSEQGLVESAIELFQSMPCK---PDIFGYNAVLKGLCRAARWEDAGELISN 543
Query: 293 --KSGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
+ C N+ F +L+ +C+KG +D A +
Sbjct: 544 MARKDCPPNEITFNILINSLCQKGLVDRAIEV 575
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 105/203 (51%), Gaps = 5/203 (2%)
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
F A L L +A +++A ++ +M +C ++FN L+ + + + + +F+ +
Sbjct: 419 FNAALKGLC-RAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQNGRVNNAIEVFEQM 477
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
P K G PD+V+Y+++I ++G ++SA L M K D+ +N +L G R
Sbjct: 478 P-KYGCTPDIVTYSSLINGLSEQGLVESAIELFQSMPCKP---DIFGYNAVLKGLCRAAR 533
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
+ DA ++ M + PN ++N ++ L + +A+E+ +M PD+FT+ A
Sbjct: 534 WEDAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAIEVFEQMPKYGSTPDIFTYNA 593
Query: 274 LIKGFVNEGNLEEAKRWYNKSGC 296
LI GF +G L++A+R + C
Sbjct: 594 LINGFSEQGRLDDARRLLSTMSC 616
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 122/297 (41%), Gaps = 42/297 (14%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI Y ++ +A + MP ++N +L ++++++ + L ++
Sbjct: 186 LINGYCRSGRLADALALIASMP---VAPDTYTYNTVLMGLCGARQWEDAEALMAEMVRN- 241
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
P+ V++ T I+AF G LD A LL M + G D++ ++TL+ GF GR DA
Sbjct: 242 HCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYSTLVNGFSEQGRVDDA 301
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI------------- 264
++ M+ +PN YNA L GL I ++ + +L+ EM K+
Sbjct: 302 IELLNGML---CKPNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCLPNEATFSMLTSC 358
Query: 265 ----------------------NPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKAI 302
PD + LI F +G +++A + N C +
Sbjct: 359 LCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKLLNSMPCSPDVIS 418
Query: 303 FKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
F + +C D A L + E C + + +++D L + RV A E+ E
Sbjct: 419 FNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQNGRVNNAIEVFE 475
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 115/255 (45%), Gaps = 4/255 (1%)
Query: 105 AAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLV 164
A +E+ ++ EM ++C +F+ L + D + + + HK G PD V
Sbjct: 327 AQRWEDVGQLIVEMVRKDCLPNEATFSMLTSCLCQNGLVDCAMEVLEQM-HKYGCRPDAV 385
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
YNT+I +F ++G +D A LL M D+I+FN L G R+ DAE++ M
Sbjct: 386 IYNTLIYSFSEQGRVDDALKLLNSMPCSP---DVISFNAALKGLCRAERWDDAEELIVQM 442
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
+ + ++N +D L + A+E+ +M PD+ T+ +LI G +G +
Sbjct: 443 LREDCPLIEMTFNILIDSLCQNGRVNNAIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLV 502
Query: 285 EEAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDR 344
E A + C + + ++ +C + A L + C ++ ++++
Sbjct: 503 ESAIELFQSMPCKPDIFGYNAVLKGLCRAARWEDAGELISNMARKDCPPNEITFNILINS 562
Query: 345 LAKELRVEEAKELVE 359
L ++ V+ A E+ E
Sbjct: 563 LCQKGLVDRAIEVFE 577
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 110/270 (40%), Gaps = 48/270 (17%)
Query: 127 VLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTI----------------- 169
V+++ L+ S + + L +P + PD +YNT+
Sbjct: 180 VVTYTTLINGYCRSGRLADALALIASMP----VAPDTYTYNTVLMGLCGARQWEDAEALM 235
Query: 170 ------------------IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSN 211
I+AF G LD A LL M + G D++ ++TL+ GF
Sbjct: 236 AEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYSTLVNGFSEQ 295
Query: 212 GRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTF 271
GR DA ++ M+ +PN YNA L GL I ++ + +L+ EM K+ P+ TF
Sbjct: 296 GRVDDAIELLNGML---CKPNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCLPNEATF 352
Query: 272 YALIKGFVNEGNLE---EAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFS 328
L G ++ E +K GC + I+ L+ E+G +D A L S
Sbjct: 353 SMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKLLN---S 409
Query: 329 ERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
C D + L + R ++A+EL+
Sbjct: 410 MPCSPDVISFNAALKGLCRAERWDDAEELI 439
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 98/232 (42%), Gaps = 38/232 (16%)
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
++V+Y T+I + G L A L+ M + D T+NT+L+G ++ DAE +
Sbjct: 179 NVVTYTTLINGYCRSGRLADALALIASMP---VAPDTYTYNTVLMGLCGARQWEDAEALM 235
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
MV + PN ++ ++ +A++L+ M PDV + L+ GF +
Sbjct: 236 AEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYSTLVNGFSEQ 295
Query: 282 GNLEE--------------------------AKRWYN---------KSGCGMNKAIFKLL 306
G +++ A+RW + + C N+A F +L
Sbjct: 296 GRVDDAIELLNGMLCKPNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCLPNEATFSML 355
Query: 307 VPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
+C+ G +D A + ++ C D ++ +++ RV++A +L+
Sbjct: 356 TSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKLL 407
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 97/213 (45%), Gaps = 11/213 (5%)
Query: 163 LVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWE 222
+V+ N +IK + L A +L ++ G D ++ NTL+ G+ +GR ADAE++
Sbjct: 112 VVACNILIKKLCAQRRLADAERVLDALKAAGA-ADPVSHNTLVAGYCRDGRLADAERLLA 170
Query: 223 TMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEG 282
NV +Y ++G + AL L+ M + PD +T+ ++ G
Sbjct: 171 AAGLSGAA-NVVTYTTLINGYCRSGRLADALALIASM---PVAPDTYTYNTVLMGLCGAR 226
Query: 283 NLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQ 339
E+A+ ++ C N+ F + C+ G LD A L R C D
Sbjct: 227 QWEDAEALMAEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYS 286
Query: 340 LVVDRLAKELRVEEAKELVE--LGKTNSYCRYN 370
+V+ +++ RV++A EL+ L K N+ C YN
Sbjct: 287 TLVNGFSEQGRVDDAIELLNGMLCKPNTIC-YN 318
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 72/140 (51%), Gaps = 5/140 (3%)
Query: 93 GFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKD 152
G+ A L L +AA +E+A ++ M ++C ++FN L+ + D +F+
Sbjct: 520 GYNAVLKGLC-RAARWEDAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAIEVFEQ 578
Query: 153 LPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNG 212
+P K G PD+ +YN +I F ++G LD A LL M K D +++N+ L G
Sbjct: 579 MP-KYGSTPDIFTYNALINGFSEQGRLDDARRLLSTMSCKP---DAVSYNSALKGLCRAE 634
Query: 213 RFADAEKIWETMVNMNVRPN 232
R+ +AE++ M+ M PN
Sbjct: 635 RWKEAEEVVAEMLRMKCPPN 654
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 78/188 (41%), Gaps = 10/188 (5%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
S+I G+ ++ ++ ++ F+ + + Y ++ L A R+ E++ + +
Sbjct: 491 SLINGLSEQGLVESAIELFQSMP----CKPDIFGYNAVLKGLCRAARWEDAGELISNMAR 546
Query: 86 YKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
KD T LI + + + A +VF++MP + ++NAL+ + D
Sbjct: 547 -KDCPPNEITFNILINSLCQKGLVDRAIEVFEQMPKYGSTPDIFTYNALINGFSEQGRLD 605
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
+ L + K PD VSYN+ +K A ++ EM + + +TF
Sbjct: 606 DARRLLSTMSCK----PDAVSYNSALKGLCRAERWKEAEEVVAEMLRMKCPPNEVTFKYA 661
Query: 205 LLGFYSNG 212
F NG
Sbjct: 662 NRLFVPNG 669
>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
Length = 578
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 119/237 (50%), Gaps = 6/237 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI Y K + A +VF+EM + +V+++N+L+ + K +E L +++ L
Sbjct: 270 LINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEM-EDL 328
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ P+ +++ ++K F KG + AN + M ++ + D++ +N L+ + G+ DA
Sbjct: 329 GLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDA 388
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ E M + PNV +YN + G + + A L+ EM+ K I DV T+ LI
Sbjct: 389 MAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGA 448
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERC 331
+G + +A + + + G N + ++ C+KG++ A+ + RT E+C
Sbjct: 449 LCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEI--RTRMEKC 503
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 104/224 (46%), Gaps = 6/224 (2%)
Query: 103 GKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEP 161
G A + + EM T ++F L+ G C NS V +F+++ + GI
Sbjct: 240 GGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVR-VFEEMKQQ-GIAA 297
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
+V+YN++I +G ++ L+ EME G+ + ITF +L GF G ADA
Sbjct: 298 SVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWI 357
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
+ M NV P+V YN +D + + A+ + M K I+P+V T+ LI GF
Sbjct: 358 DGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRS 417
Query: 282 GNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
G+ A + + G + + +L+ +C KG++ A L
Sbjct: 418 GDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKL 461
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 126/279 (45%), Gaps = 14/279 (5%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFR---TNTGIYTGTVQRLANAKRFRWIEEILEH 82
S+I G+ E ++ V ++ DLG T + G ++ A WI+ + E
Sbjct: 304 SLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTER 363
Query: 83 QKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKK 142
+ D+ LI +Y + E+A V + M + V ++N L+ S
Sbjct: 364 NVE-PDVVIYNI---LIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGD 419
Query: 143 FDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFN 202
+ GL ++ K GIE D+V+YN +I A KG + A LL EM + G+ + +T+N
Sbjct: 420 WRSASGLLDEMKEK-GIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYN 478
Query: 203 TLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
T++ GF G A +I M R NV +YN + + +A +L+ EM K
Sbjct: 479 TIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDK 538
Query: 263 EINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKA 301
+ P+ T+ + +G + +G + + GC +++A
Sbjct: 539 CLVPNGITYETIKEGMMEKGYTPDIR------GCTVSQA 571
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 88/202 (43%), Gaps = 39/202 (19%)
Query: 129 SFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSA------ 182
S NALL V +K+ D + F+ + + PD+ ++NT+I G L A
Sbjct: 158 SVNALLAGLVGAKRVDLAEKAFRSALRRR-VSPDIYTFNTVISGLCRIGQLRKAGDVAKD 216
Query: 183 --------------------------------NTLLYEMEKKGIRLDLITFNTLLLGFYS 210
+ LL EM + GI +TF L+ G+
Sbjct: 217 IKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCK 276
Query: 211 NGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
N A A +++E M + +V +YN+ + GL E + ++ ++L+ EM ++P+ T
Sbjct: 277 NSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEIT 336
Query: 271 FYALIKGFVNEGNLEEAKRWYN 292
F ++KGF +G + +A W +
Sbjct: 337 FGCVLKGFCKKGMMADANDWID 358
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 69/168 (41%), Gaps = 6/168 (3%)
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
P S N ++ V +D A ++ + D+ TFNT++ G G+ A +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALE---LVGEMRSKEINPDVFTFYALIKG 277
+ + + P+V +YN+ +DG + L+ EM I+P TF LI G
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273
Query: 278 FVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
+ N A R + + G + + L+ +C +G ++ L
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKL 321
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 74/166 (44%), Gaps = 6/166 (3%)
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
+ N LL G R AEK + + + V P++ ++N + GL Q +KA ++ ++
Sbjct: 158 SVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDI 217
Query: 260 RSKEINPDVFTFYALIKGFVNEG------NLEEAKRWYNKSGCGMNKAIFKLLVPFVCEK 313
++ + P V T+ +LI G+ +G +++ + ++G F +L+ C+
Sbjct: 218 KAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKN 277
Query: 314 GDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ A + + + ++ L E +VEE +L+E
Sbjct: 278 SNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLME 323
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 11/92 (11%)
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA-- 287
RP+ S NA L GL K+ A + + ++PD++TF +I G G L +A
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212
Query: 288 -----KRWYNKSGCGMNKAIFKLLVPFVCEKG 314
K W G + A + L+ C+KG
Sbjct: 213 VAKDIKAW----GLAPSVATYNSLIDGYCKKG 240
>gi|224096624|ref|XP_002310676.1| predicted protein [Populus trichocarpa]
gi|222853579|gb|EEE91126.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 133/289 (46%), Gaps = 37/289 (12%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKD--------------- 152
++A F+ M RN + ++ FN LL + V KK++ V LFK+
Sbjct: 21 LDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTLSI 80
Query: 153 -------LPH------------KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKG 193
L H K G +PD+V + T+I G + A LL EM G
Sbjct: 81 LINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLVG 140
Query: 194 IRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKAL 253
D++T N+L+ G+ S G+ KI+ MV+ ++P+V SY+ ++G ++ +A+
Sbjct: 141 CVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAM 200
Query: 254 ELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK-SGCGMNKAI--FKLLVPFV 310
EL EM + + P+ T+ LIK +A+ + K CG++ I + L+
Sbjct: 201 ELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGF 260
Query: 311 CEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
C++G+LD L + D ++++ + + +V++AKE++
Sbjct: 261 CKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLS 309
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 103/209 (49%), Gaps = 4/209 (1%)
Query: 102 YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEP 161
Y + RK+F M + + V S++ + +K DE LF ++ H+ G+ P
Sbjct: 155 YCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHR-GVVP 213
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
+ V+YNT+IKA A L +M G+ D++ ++TLL GF G + ++
Sbjct: 214 NAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEMLVLF 273
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
+ M V+P++ Y ++G+ ++ K A E++ + + + PDV T+ AL+ G E
Sbjct: 274 QEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDGLCRE 333
Query: 282 GNLEEAKRWYNK---SGCGMNKAIFKLLV 307
G++ EA R + K GC + +L+
Sbjct: 334 GSIIEALRLFRKMEEDGCMPGSCSYNVLL 362
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 87/201 (43%), Gaps = 7/201 (3%)
Query: 76 IEEILEHQKQYKDISKEGFTAR------LIALYGKAAMFENARKVFDEMPGRNCEQTVLS 129
+E+I E + + ++S G LI +A +A+ +F +M +L+
Sbjct: 193 VEKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILA 252
Query: 130 FNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEM 189
++ LL DE+ LF+++ +L ++PDLV Y II + A +L +
Sbjct: 253 YSTLLDGFCKQGNLDEMLVLFQEMQRRL-VKPDLVVYTIIINGMCRSRKVKDAKEVLSRL 311
Query: 190 EKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQT 249
+G++ D+ T+ L+ G G +A +++ M P SYN L G T
Sbjct: 312 IVEGLKPDVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDT 371
Query: 250 KKALELVGEMRSKEINPDVFT 270
++L+ EM + D T
Sbjct: 372 STVVQLIHEMADRGFYADAVT 392
>gi|356523854|ref|XP_003530549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g16890, mitochondrial-like [Glycine max]
Length = 678
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 136/285 (47%), Gaps = 7/285 (2%)
Query: 78 EILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGAC 137
EIL Q I G LI + K E +V+ ++ V S+N ++
Sbjct: 383 EILRKQGVKAGI---GAYLALIEVLYKNEWREEGDRVYGQLISDGLISNVFSYNMIINCF 439
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLD 197
+K D F+D+ + G+ P+LV++NT+I G++D A LL + + G++ D
Sbjct: 440 CRAKLMDNASEAFRDMQVR-GVVPNLVTFNTLINGHCKDGAIDKARKLLESLLENGLKPD 498
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
+ TF++++ G R +A + + M+ + PN YN + L ++++L+
Sbjct: 499 IFTFSSIVDGLCQIKRTEEALECFTEMIEWGINPNAVIYNILIRSLCTIGDVARSVKLLR 558
Query: 258 EMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKG 314
M+ + I+PD +++ ALI+ F +E+AK+ ++ +SG + + + + E G
Sbjct: 559 RMQKEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPDNYTYSAFIEALSESG 618
Query: 315 DLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
L+ A + + C D L++ L ++ VEEA+ ++E
Sbjct: 619 RLEEAKKMFYSMEANGCSPDSYICNLIIKILVQQEYVEEAQNIIE 663
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 79/172 (45%), Gaps = 1/172 (0%)
Query: 92 EGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFK 151
E L+A +G+ + + VF ++ T +NAL+ A V S D F+
Sbjct: 144 EDLLCALLASWGRLGLANYSAHVFCQISFLGLSPTTRLYNALIDALVKSNSIDLAYLKFQ 203
Query: 152 DLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSN 211
+ + D +YNT+I G +D A L+ +M+ KG ++ T+ L+ GF
Sbjct: 204 QMAADNCVA-DRFTYNTLIHGVCKVGVVDEALRLVRQMKDKGHFPNVFTYTMLIEGFCIA 262
Query: 212 GRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
R +A ++ETM + V PN + A + G+ KALEL+ E +E
Sbjct: 263 SRVDEAFGVFETMKDSGVYPNEATVRALVHGVFRCVDPSKALELLSEFLDRE 314
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 54/121 (44%)
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
LG+ P YN +I A V S+D A +M D T+NTL+ G G +
Sbjct: 173 LGLSPTTRLYNALIDALVKSNSIDLAYLKFQQMAADNCVADRFTYNTLIHGVCKVGVVDE 232
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
A ++ M + PNV +Y ++G I + +A + M+ + P+ T AL+
Sbjct: 233 ALRLVRQMKDKGHFPNVFTYTMLIEGFCIASRVDEAFGVFETMKDSGVYPNEATVRALVH 292
Query: 277 G 277
G
Sbjct: 293 G 293
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 67/376 (17%), Positives = 139/376 (36%), Gaps = 43/376 (11%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I G+ K + + ++ D G F N YT ++ A R + E K
Sbjct: 219 TLIHGVCKVGVVDEALRLVRQMKDKGHF-PNVFTYTMLIEGFCIASRVDEAFGVFETMKD 277
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQT----VLSFNALLGACVNSK 141
E L+ + A ++ E R EQ +L+ + +L N+
Sbjct: 278 SGVYPNEATVRALVHGVFRCVDPSKALELLSEFLDREQEQERVHFMLACDTVLYCLANNS 337
Query: 142 KFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITF 201
E+ + + + G P +N ++ V L + + K+G++ + +
Sbjct: 338 MAKEMVVFLRRVLGRGGYFPGNSVFNVVMACLVKGAELRETCDVFEILRKQGVKAGIGAY 397
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS 261
L+ Y N + ++++ +++ + NV SYN ++ K A E +M+
Sbjct: 398 LALIEVLYKNEWREEGDRVYGQLISDGLISNVFSYNMIINCFCRAKLMDNASEAFRDMQV 457
Query: 262 KEINPDVFTFYALIKGFVNEGNLEEAKRWYN----------------------------- 292
+ + P++ TF LI G +G +++A++
Sbjct: 458 RGVVPNLVTFNTLINGHCKDGAIDKARKLLESLLENGLKPDIFTFSSIVDGLCQIKRTEE 517
Query: 293 ---------KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVD 343
+ G N I+ +L+ +C GD+ + L +R E D ++
Sbjct: 518 ALECFTEMIEWGINPNAVIYNILIRSLCTIGDVARSVKLLRRMQKEGISPDTYSYNALIQ 577
Query: 344 RLAKELRVEEAKELVE 359
+ +VE+AK+L +
Sbjct: 578 IFCRMNKVEKAKKLFD 593
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 67/157 (42%), Gaps = 1/157 (0%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
E A + F EM + +N L+ + L + + K GI PD SYN
Sbjct: 516 EEALECFTEMIEWGINPNAVIYNILIRSLCTIGDVARSVKLLRRM-QKEGISPDTYSYNA 574
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
+I+ F ++ A L M + G+ D T++ + +GR +A+K++ +M
Sbjct: 575 LIQIFCRMNKVEKAKKLFDSMSRSGLNPDNYTYSAFIEALSESGRLEEAKKMFYSMEANG 634
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEIN 265
P+ N + L ++ ++A ++ R K I+
Sbjct: 635 CSPDSYICNLIIKILVQQEYVEEAQNIIERCRQKGIS 671
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 76/181 (41%), Gaps = 14/181 (7%)
Query: 25 GSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQK 84
S++ G+ + + ++ F + + G N IY ++ L I ++ K
Sbjct: 503 SSIVDGLCQIKRTEEALECFTEMIEWG-INPNAVIYNILIRSLCT------IGDVARSVK 555
Query: 85 QYKDISKEGFTA------RLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACV 138
+ + KEG + LI ++ + E A+K+FD M +++A + A
Sbjct: 556 LLRRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPDNYTYSAFIEALS 615
Query: 139 NSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL 198
S + +E +F + G PD N IIK V + ++ A ++ +KGI L+
Sbjct: 616 ESGRLEEAKKMFYSMEAN-GCSPDSYICNLIIKILVQQEYVEEAQNIIERCRQKGISLNS 674
Query: 199 I 199
I
Sbjct: 675 I 675
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 69/171 (40%), Gaps = 7/171 (4%)
Query: 159 IEPDLVSYNTIIKAFVD----KGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRF 214
+ P L ++N++ +A + KG + LL E+ G R+ LL + G
Sbjct: 101 VNPTLAAHNSVHRALRNTLHRKGPALLSVDLLRELRNLGFRVTEDLLCALLASWGRLGLA 160
Query: 215 ADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYAL 274
+ ++ + + + P R YNA +D L A +M + D FT+ L
Sbjct: 161 NYSAHVFCQISFLGLSPTTRLYNALIDALVKSNSIDLAYLKFQQMAADNCVADRFTYNTL 220
Query: 275 IKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
I G G ++EA R + G N + +L+ C +D AF +
Sbjct: 221 IHGVCKVGVVDEALRLVRQMKDKGHFPNVFTYTMLIEGFCIASRVDEAFGV 271
>gi|357439849|ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479250|gb|AES60453.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 772
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 124/266 (46%), Gaps = 4/266 (1%)
Query: 51 GRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFEN 110
G + N Y + K + ++EIL+ ++ + + + LI Y + E
Sbjct: 246 GIVKPNVFTYNTLLNAYVGRKDRKGVDEILKLMEKEQVVFSVATYSILIQWYSSSGDIEE 305
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A K+F+EM +N E V +++++ LF ++ + I P+ +Y +I
Sbjct: 306 AEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQR-DIVPNAHTYGALI 364
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
G +++A LL EM+ KG+ L+L+ FNT + G+ G+ +A ++ M +
Sbjct: 365 GGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGIN 424
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
+V +YN +GL + +A ++ M K + P+V TF I+ + EGNL EA+R
Sbjct: 425 ADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERL 484
Query: 291 Y---NKSGCGMNKAIFKLLVPFVCEK 313
+ K G N + L+ C+K
Sbjct: 485 FRDMEKKGEVPNIITYNTLIDAYCKK 510
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 110/215 (51%), Gaps = 2/215 (0%)
Query: 79 ILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACV 138
+LE Q + D++ F + Y + + A ++ M + V ++N L
Sbjct: 380 LLEMQSKGVDLNLVIFNTTMDG-YCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLC 438
Query: 139 NSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL 198
++DE + + K G++P++V++ I+ + +G+L A L +MEKKG ++
Sbjct: 439 KLHRYDEAKCILNSMVEK-GVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNI 497
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
IT+NTL+ + + A KI M+N + P++ +Y++ + G I + +AL+L E
Sbjct: 498 ITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNE 557
Query: 259 MRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK 293
MR K I +V T+ ++I G EG +EA + Y++
Sbjct: 558 MRLKGITRNVATYTSMISGLSKEGRADEAFKLYDE 592
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 108/235 (45%), Gaps = 3/235 (1%)
Query: 124 EQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSAN 183
E V S ++ + ++ L ++ K ++P++ +YNT++ A+V + +
Sbjct: 213 EIRVQSLTLVIDVLCRRGEVEKAKELMDEMVGKGIVKPNVFTYNTLLNAYVGRKDRKGVD 272
Query: 184 TLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
+L MEK+ + + T++ L+ + S+G +AEKI+E M N+ +V Y++ +
Sbjct: 273 EILKLMEKEQVVFSVATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWS 332
Query: 244 AIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW---YNKSGCGMNK 300
K+A L EM ++I P+ T+ ALI G G +E A+ G +N
Sbjct: 333 RRLGNMKRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNL 392
Query: 301 AIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAK 355
IF + C +G +D A L + D ++ + L K R +EAK
Sbjct: 393 VIFNTTMDGYCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAK 447
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 126/259 (48%), Gaps = 12/259 (4%)
Query: 25 GSVIRGIYKENNLKR----LVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEIL 80
G++I G+ K ++ L++ K DL NT + G +R + R ++ I+
Sbjct: 361 GALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTM-DGYCRRGKMDEALR-LQAIM 418
Query: 81 EHQKQYKDISKEGFTARLIA-LYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
E K I+ + FT ++A K ++ A+ + + M + + V++F +
Sbjct: 419 EK----KGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCK 474
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
E + LF+D+ K G P++++YNT+I A+ K + A+ + EM KG+ DL
Sbjct: 475 EGNLAEAERLFRDMEKK-GEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDLY 533
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
T+++L+ G GR +A K++ M + NV +Y + + GL+ E + +A +L EM
Sbjct: 534 TYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMISGLSKEGRADEAFKLYDEM 593
Query: 260 RSKEINPDVFTFYALIKGF 278
+ PD F +L+ F
Sbjct: 594 MKIGLIPDDRVFTSLVGSF 612
>gi|255660784|gb|ACU25561.1| pentatricopeptide repeat-containing protein [Verbena officinalis]
Length = 418
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 142/313 (45%), Gaps = 4/313 (1%)
Query: 5 SRLLSCSFSTTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTV 64
S + + T T ++ S + Y E+ R + + + +FR +
Sbjct: 49 SSVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVL 108
Query: 65 QRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCE 124
+ L K F+ + E + + F L+ + K A+ VFD + +
Sbjct: 109 EHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLR 168
Query: 125 QTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANT 184
+V+SFN L+ + DE L K+ G++PD+ +Y+ +I + +D AN
Sbjct: 169 PSVVSFNTLMNGYIKLGDLDEGFRL-KNAMQASGVQPDVYTYSVLINGLCKESKMDDANE 227
Query: 185 LLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLA 244
L EM + + +TF TL+ G NGR A +I++ M++ ++ P++ +YN + GL
Sbjct: 228 LFDEMLDNXLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLC 287
Query: 245 IEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKA 301
+ K+A +L+ EM K + PD T+ LI G EG+LE A ++ K ++
Sbjct: 288 KKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFKYRKRMIKENIRLDDV 347
Query: 302 IFKLLVPFVCEKG 314
+ L+ +C++G
Sbjct: 348 AYTALISGLCQEG 360
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 83/173 (47%), Gaps = 1/173 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K + A +++ +M ++ ++++N L+ + L ++ K
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMK- 305
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD ++Y T+I +G L++A M K+ IRLD + + L+ G GR DA
Sbjct: 306 GLKPDKITYTTLIDGNCKEGDLETAFKYRKRMIKENIRLDDVAYTALISGLCQEGRSVDA 365
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
EK+ M+++ ++P + +Y ++ + +L+ EM+ P V T
Sbjct: 366 EKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
>gi|219885451|gb|ACL53100.1| unknown [Zea mays]
Length = 437
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 114/239 (47%), Gaps = 10/239 (4%)
Query: 113 KVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKA 172
KV D +P + TV +N +L A + LF+ +P + PD S+ T ++
Sbjct: 10 KVLDLLPRDDAALTVSDYNDILSALARAGDHATAVALFRAMP----VAPDAHSFATAVQC 65
Query: 173 FVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPN 232
+G+ D A L EM +G R + TF+ ++ GR A ++ + M + P
Sbjct: 66 LCRQGAPDEAKLALDEMVARGFRPSVATFSAVVGCLCKRGRVTKAMEVLDAMCGLGCEPT 125
Query: 233 VRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN 292
+R+YN+ + GL + ++ALEL+ +++ + PD++TF ++ GF G EEA ++
Sbjct: 126 IRTYNSLVGGLCYVGRLEEALELLKKLKDSPLTPDIYTFTIVLDGFCKVGRTEEATAIFH 185
Query: 293 KS-GCGMNKAIFK--LLVPFVCEKGDLDFAFNLCKRTFS---ERCLVDQAPLQLVVDRL 345
+ G G++ F L+ C++G+ AF L CL D+ +V+ L
Sbjct: 186 DAIGMGLSPTTFTYNALLNGHCKEGNPLKAFALLMEMCGNNDAACLPDKTSFGIVLTAL 244
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 82/223 (36%), Gaps = 12/223 (5%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A +V D M G CE T+ ++N+L+G + +E L K L + PD+ ++ ++
Sbjct: 110 AMEVLDAMCGLGCEPTIRTYNSLVGGLCYVGRLEEALELLKKLKDS-PLTPDIYTFTIVL 168
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN-- 228
F G + A + ++ G+ T+N LL G G A + M N
Sbjct: 169 DGFCKVGRTEEATAIFHDAIGMGLSPTTFTYNALLNGHCKEGNPLKAFALLMEMCGNNDA 228
Query: 229 -VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE------ 281
P+ S+ L L +T A + M D L +G
Sbjct: 229 ACLPDKTSFGIVLTALLRAGETSAAWQTYKRMERAGFEVDGRALDTLARGLCRRCATDAS 288
Query: 282 --GNLEEAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
G+ EE SG + L+ + G++D A L
Sbjct: 289 ALGDAEEVFAKVVASGHEPVSYTYCLMAQALARGGEVDAAVAL 331
>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
Length = 1003
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 119/247 (48%), Gaps = 5/247 (2%)
Query: 127 VLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLL 186
V ++NAL+ +++FD+ D LFK++ + G+EP+ V+Y +I A +G ++ A L
Sbjct: 338 VFAYNALIDKLCKNERFDDADRLFKEMAGR-GLEPNEVTYAILIHALCKRGMIEDALCLF 396
Query: 187 YEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIE 246
+M KGI++ + +N+L+ G+ G A + MV + P SY+ + GL
Sbjct: 397 DKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRN 456
Query: 247 KQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIF 303
+EL EM + I + +TF ALI GF + ++EA R ++K S N+ F
Sbjct: 457 GDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTF 516
Query: 304 KLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKT 363
+++ C G++ AF L + D + ++ L V +A E V
Sbjct: 517 NVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVA-DLE 575
Query: 364 NSYCRYN 370
NSY N
Sbjct: 576 NSYAVLN 582
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 114/248 (45%), Gaps = 14/248 (5%)
Query: 46 KSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFT------ARLI 99
K DLG N Y + +L +RF + + +K+++ G A LI
Sbjct: 328 KLGDLGMV-PNVFAYNALIDKLCKNERFD------DADRLFKEMAGRGLEPNEVTYAILI 380
Query: 100 ALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGI 159
K M E+A +FD+M + + TV +N+L+ D GL + K G+
Sbjct: 381 HALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMV-KEGL 439
Query: 160 EPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEK 219
P SY+ +I G L S L EM ++GI + TF L+ GF + + +A +
Sbjct: 440 TPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAAR 499
Query: 220 IWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFV 279
+++ M++ NV PN ++N ++G + +KA +L +M + PD +T+ +LI G
Sbjct: 500 LFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLC 559
Query: 280 NEGNLEEA 287
+ +A
Sbjct: 560 LTSGVSKA 567
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 102/231 (44%), Gaps = 3/231 (1%)
Query: 129 SFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
S ALL +F E L+ ++ + G++ DLVS+ I+ A + + + + L E
Sbjct: 585 SLTALLYGFFREGRFTETYHLWDEMAVR-GVKLDLVSFTIIVYAALKQHDKEKSCVLFRE 643
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
M+++G++ D I + ++ A W+ MV PN ++ ++ L
Sbjct: 644 MKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGY 703
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKAI--FKLL 306
A L EM + + P+ FT+ + F EG++E+AK ++ G +I F +L
Sbjct: 704 LGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNIL 763
Query: 307 VPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
+ +C+ G + A +L + D ++ L K + +A EL
Sbjct: 764 IKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFEL 814
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 128/301 (42%), Gaps = 43/301 (14%)
Query: 99 IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKL 157
I Y ++ + AR + M + + + +N L+ G C N + + V+ K++ +
Sbjct: 205 IRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVE--VKNVMVNI 262
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSA-------------------NTLLYEMEKK------ 192
G+ D V+Y T++ F L+ A + ++ E+ KK
Sbjct: 263 GVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEA 322
Query: 193 ----------GIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDG 242
G+ ++ +N L+ N RF DA+++++ M + PN +Y +
Sbjct: 323 FSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHA 382
Query: 243 LAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMN 299
L + AL L +MR K I V+ + +LI G+ +G+L+ A+ + K G
Sbjct: 383 LCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPT 442
Query: 300 KAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV-DQAPLQLVVDRLAKELRVEEAKELV 358
A + L+ +C GDL L R +ER + + +++ K+ +++EA L
Sbjct: 443 AASYSPLIAGLCRNGDLSSCMEL-HREMAERGIAWNNYTFTALINGFCKDKKMDEAARLF 501
Query: 359 E 359
+
Sbjct: 502 D 502
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 110/252 (43%), Gaps = 41/252 (16%)
Query: 148 GLFKDLPHKL---GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
L +DL K+ G+ D Y I+A+ + +LD A L+ ME +G++ + +N L
Sbjct: 180 ALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVL 239
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALE---------- 254
+ G N R +A ++ MVN+ V + +Y + G ++ + AL
Sbjct: 240 MYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGF 299
Query: 255 ---------LVGEMRSKEI----------------NPDVFTFYALIKGFVNEGNLEEAKR 289
++ E+R KE+ P+VF + ALI ++A R
Sbjct: 300 VPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADR 359
Query: 290 WYNK-SGCGM--NKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLA 346
+ + +G G+ N+ + +L+ +C++G ++ A L + + V P +++
Sbjct: 360 LFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYC 419
Query: 347 KELRVEEAKELV 358
K+ ++ A+ L+
Sbjct: 420 KQGSLDRARGLL 431
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 1/120 (0%)
Query: 126 TVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTL 185
+++SFN L+ + K E L + G PD +SY+TII G ++ A L
Sbjct: 756 SIVSFNILIKGLCKAGKIQEAIDLMSKITES-GFSPDCISYSTIIHELCKMGDINKAFEL 814
Query: 186 LYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAI 245
EM KG++ D++ +N + +G A I+ M+ V+PN +Y A L G+++
Sbjct: 815 WNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISL 874
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 63/130 (48%), Gaps = 2/130 (1%)
Query: 151 KDLPHKL--GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
KDL + G +VS+N +IK G + A L+ ++ + G D I+++T++
Sbjct: 743 KDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHEL 802
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDV 268
G A ++W M+ ++P+V +YN + + ++ KAL + M + P+
Sbjct: 803 CKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNW 862
Query: 269 FTFYALIKGF 278
T+ AL+ G
Sbjct: 863 DTYRALLSGI 872
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 92/229 (40%), Gaps = 6/229 (2%)
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
+T + AL + M + A +D+M ++ L+ S + L K++
Sbjct: 656 YTCMIDALSKEENMIQ-ALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEM 714
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
+ P+ +YN + F +G ++ A L M +G +++FN L+ G G+
Sbjct: 715 LAG-NVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM-LQGHLASIVSFNILIKGLCKAGK 772
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
+A + + P+ SY+ + L KA EL EM K + PDV +
Sbjct: 773 IQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNI 832
Query: 274 LIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFA 319
I+ G ++A Y +SG N ++ L+ + DF+
Sbjct: 833 FIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLMLHYDFS 881
Score = 37.7 bits (86), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 72/185 (38%), Gaps = 7/185 (3%)
Query: 193 GIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKA 252
GI ++ T + +L +FA A +++ M+ V + Y A + + A
Sbjct: 158 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 217
Query: 253 LELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPF 309
LV M S+ + + L+ G ++EA N G ++ ++ LV
Sbjct: 218 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYG 277
Query: 310 VCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV----ELGKTNS 365
C +L+ A + + +A ++D L K+ VEEA L +LG +
Sbjct: 278 FCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPN 337
Query: 366 YCRYN 370
YN
Sbjct: 338 VFAYN 342
>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 735
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 129/287 (44%), Gaps = 39/287 (13%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A + D M C+ V+++N+++ S L + + + ++ D+ +Y+TII
Sbjct: 177 AVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEER-NVKADVFTYSTII 235
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
+ G +D+A +L EME KGI+ ++T+N+L+ G G++ D + + MV+ +
Sbjct: 236 DSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIV 295
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK-- 288
PNV ++N LD E + ++A EL EM ++ I+P++ T+ L+ G+ + L EA
Sbjct: 296 PNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNM 355
Query: 289 ------------------------------------RWYNKSGCGMNKAIFKLLVPFVCE 312
R +K G N + +LV C+
Sbjct: 356 LDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQ 415
Query: 313 KGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
G + A L + S L D +++D L ++E+A E+ E
Sbjct: 416 SGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFE 462
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 117/225 (52%), Gaps = 4/225 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+ ++ K + A +++ EM R ++++N L+ + E + + DL +
Sbjct: 304 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML-DLMVRN 362
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
PD+V++ ++IK + +D + + K+G+ + +T++ L+ GF +G+ A
Sbjct: 363 KCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLA 422
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
E++++ MV+ V P+V +Y LDGL + +KALE+ +++ +++ + + +I+G
Sbjct: 423 EELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEG 482
Query: 278 FVNEGNLEEAKRWYNKSGC-GM--NKAIFKLLVPFVCEKGDLDFA 319
G +E+A + C G+ N + +++ +C+KG L A
Sbjct: 483 MCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEA 527
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 120/252 (47%), Gaps = 4/252 (1%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
++A +F EM +++ F+ A +K+F+ V K L GI ++ + N
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELN-GIAHNIYTLNI 128
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
+I F A ++L ++ K G D TFNTL+ G + G+ ++A + + MV
Sbjct: 129 MINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENG 188
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
+P+V +YN+ ++G+ T AL+L+ +M + + DVFT+ +I +G ++ A
Sbjct: 189 CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 248
Query: 289 RWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRL 345
+ + G + + LV +C+ G + L K S + + +++D
Sbjct: 249 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 308
Query: 346 AKELRVEEAKEL 357
KE +++EA EL
Sbjct: 309 VKEGKLQEANEL 320
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 97/205 (47%), Gaps = 3/205 (1%)
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
FT+ LI Y ++ KVF + R ++++ L+ S K + LF+++
Sbjct: 371 FTS-LIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM 429
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
G+ PD+++Y ++ D G L+ A + +++K + L ++ + T++ G G+
Sbjct: 430 VSH-GVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGK 488
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
DA ++ ++ V+PNV +Y + GL + +A L+ +M P+ T+
Sbjct: 489 VEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNT 548
Query: 274 LIKGFVNEGNL-EEAKRWYNKSGCG 297
LI+ + +G+L AK CG
Sbjct: 549 LIRAHLRDGDLTASAKLIEEMKSCG 573
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 91/217 (41%), Gaps = 38/217 (17%)
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
KLG EPD ++NT+IK +G + A L+ M + G + D++T+N+++ G +G +
Sbjct: 151 KLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTS 210
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMR--------------- 260
A + M NV+ +V +Y+ +D L + A+ L EM
Sbjct: 211 LALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 270
Query: 261 --------------------SKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCG 297
S+EI P+V TF L+ FV EG L+EA Y + G
Sbjct: 271 RGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGIS 330
Query: 298 MNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
N + L+ C + L A N+ +C D
Sbjct: 331 PNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPD 367
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 94/212 (44%), Gaps = 9/212 (4%)
Query: 37 LKRLVDKFKKSSDLGR--FRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY---KDISK 91
+KR+ D K ++ + N Y+ VQ + + + EE+ + + D+
Sbjct: 381 VKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMT 440
Query: 92 EGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFK 151
G + GK E A ++F+++ + ++ + ++ K ++ LF
Sbjct: 441 YGILLDGLCDNGK---LEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFC 497
Query: 152 DLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSN 211
LP K G++P++++Y +I KGSL AN LL +ME+ G + T+NTL+ +
Sbjct: 498 SLPCK-GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRD 556
Query: 212 GRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
G + K+ E M + + S +D L
Sbjct: 557 GDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 97/211 (45%), Gaps = 7/211 (3%)
Query: 71 KRFRWIEEILEHQKQYKDISKEGFTAR------LIALYGKAAMFENARKVFDEMPGRNCE 124
K + ++ + + K +++ISK G A L+ + ++ + A ++F EM
Sbjct: 376 KGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL 435
Query: 125 QTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANT 184
V+++ LL ++ K ++ +F+DL K ++ +V Y TII+ G ++ A
Sbjct: 436 PDVMTYGILLDGLCDNGKLEKALEIFEDL-QKSKMDLGIVMYTTIIEGMCKGGKVEDAWN 494
Query: 185 LLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLA 244
L + KG++ +++T+ ++ G G ++A + M PN +YN +
Sbjct: 495 LFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHL 554
Query: 245 IEKQTKKALELVGEMRSKEINPDVFTFYALI 275
+ + +L+ EM+S + D + +I
Sbjct: 555 RDGDLTASAKLIEEMKSCGFSADASSIKMVI 585
>gi|218197339|gb|EEC79766.1| hypothetical protein OsI_21159 [Oryza sativa Indica Group]
Length = 410
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 139/307 (45%), Gaps = 7/307 (2%)
Query: 58 GIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYG--KAAMFENARKVF 115
G V+RL A R +L + D + + TA + G K AR+VF
Sbjct: 3 GTTAAAVRRLCAAGDVRSALAMLARGTKSGDAALD-VTACTALVNGCCKGGDVAEARRVF 61
Query: 116 DEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVD 175
DEMP +++ AL+ + ++ LF+++ + G+EP+L +YN +I +
Sbjct: 62 DEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEM-RRGGVEPNLYTYNCLIGEWCR 120
Query: 176 KGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRS 235
G + A +L EM +GI +++++NTL+ G +G+ DA K+ + M RP++ +
Sbjct: 121 TGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIIT 180
Query: 236 YNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN--- 292
+N +DG + AL +M++ P T+ LI GF ++ A R +
Sbjct: 181 FNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMK 240
Query: 293 KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVE 352
+ G K + +L+ + + AF + VD ++V L E ++
Sbjct: 241 ERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMK 300
Query: 353 EAKELVE 359
+A++L +
Sbjct: 301 DARKLFQ 307
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 122/266 (45%), Gaps = 6/266 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHK 156
LI + + FE AR +FDEMP R + V+S+N L+ G C + K +D L D+
Sbjct: 114 LIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLL--DMMRT 171
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
G P ++++N ++ + G + +A +M+ G + +T+N L+ GF
Sbjct: 172 EGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTR 231
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
A + M + P +Y +D A E KA E++ M + D T+ L++
Sbjct: 232 ANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVR 291
Query: 277 GFVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV 333
EGN+++A++ + + G + I+ +++ +G A L + +
Sbjct: 292 ALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIP 351
Query: 334 DQAPLQLVVDRLAKELRVEEAKELVE 359
+ A L + L K+ + +EA+ L++
Sbjct: 352 NSASYGLTIRVLCKDDKCQEAEALLD 377
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 75/166 (45%), Gaps = 9/166 (5%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN----SKKFDEVDGLFKDL 153
LIA + +A A + +M R E T +++ L+ + K F+ + G+
Sbjct: 219 LIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGM---- 274
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
K G+E D +Y +++A +G++ A L M +KG+ + ++ ++ G+ G
Sbjct: 275 -EKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGS 333
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
A K+ M + PN SY + L + + ++A L+ +M
Sbjct: 334 SYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDM 379
>gi|356557306|ref|XP_003546958.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Glycine max]
Length = 654
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 120/270 (44%), Gaps = 12/270 (4%)
Query: 25 GSVIRGIYKENNLKRLVDK-------FKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIE 77
G V+R E L R D + +S R + Y ++ L+ ++F +
Sbjct: 117 GVVVRPGLTERVLSRCGDAGNLAYRFYSWASKQSGHRLDHDAYKAMIKVLSRMRQFGAVW 176
Query: 78 EILEHQKQYKD--ISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLG 135
++E +Q I+ + F L+ + A M A +V DEMP CE F LL
Sbjct: 177 ALIEEMRQENPHLITPQVFVI-LMRRFASARMVHKAVEVLDEMPKYGCEPDEYVFGCLLD 235
Query: 136 ACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIR 195
A + E LF+D+ ++ +P + + +++ + +G L A +L +M+ GI
Sbjct: 236 ALCKNGSVKEAASLFEDMRYRW--KPSVKHFTSLLYGWCKEGKLMEAKHVLVQMKDMGIE 293
Query: 196 LDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALEL 255
D++ +N LL G+ G+ DA + + M PN SY + L ++ ++A L
Sbjct: 294 PDIVVYNNLLGGYAQAGKMGDAYDLLKEMRRKRCEPNATSYTVLIQSLCKHERLEEATRL 353
Query: 256 VGEMRSKEINPDVFTFYALIKGFVNEGNLE 285
EM++ DV T+ LI GF G ++
Sbjct: 354 FVEMQTNGCQADVVTYSTLISGFCKWGKIK 383
>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
Length = 1007
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 113/237 (47%), Gaps = 4/237 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I Y + +A ++ D M C+ S+ L+ K + GLF ++
Sbjct: 466 IIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDD- 524
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ P+ V+Y +I + LD+A +LL M++ G R ++ T+N L+ G F+ A
Sbjct: 525 GLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGA 584
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
E++ + M+ + PNV +Y A +DGL T ALE+ +M + P++ T+ +LI+
Sbjct: 585 EELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRA 644
Query: 278 FVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERC 331
EG +EEA+ + + G ++ + ++ G ++ AFN R C
Sbjct: 645 LGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGC 701
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 114/246 (46%), Gaps = 13/246 (5%)
Query: 120 GRN-CEQTVLSFNALL-GACV---NSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFV 174
GRN C ++++N ++ G C+ K ++ + + G +LV+YNTIIK +
Sbjct: 417 GRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQR-----GHSANLVTYNTIIKGYC 471
Query: 175 DKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVR 234
D G+ SA +L M G + D ++ L+ GF + A ++ MV+ + PN
Sbjct: 472 DSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEV 531
Query: 235 SYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL---EEAKRWY 291
+Y A +DG +++ A L+ M+ P+V T+ LI G + N EE +
Sbjct: 532 TYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVM 591
Query: 292 NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRV 351
+ G N + ++ +C+ G A + + + CL + ++ L +E +V
Sbjct: 592 IEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKV 651
Query: 352 EEAKEL 357
EEA+ L
Sbjct: 652 EEAENL 657
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/372 (21%), Positives = 157/372 (42%), Gaps = 43/372 (11%)
Query: 40 LVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFT-ARL 98
++D++ + G + N IY + L E I++ + ++S + FT +
Sbjct: 199 VMDRYHRMLSEG-VQPNLLIYNAVINALCKDGNVADAETIMKKVFE-SEMSPDTFTYTSM 256
Query: 99 IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE---------VDG- 148
I + + ++A +VF++M CE ++++ L+ +S + +E + G
Sbjct: 257 ILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGI 316
Query: 149 -------------------------LFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSAN 183
LF D+ +K G EP++ +Y +I G L A
Sbjct: 317 LPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNK-GCEPNVYTYTALISGLCVSGLLKVAI 375
Query: 184 TLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
L + M + G+ + +T+N L+ N R A + M PN+ +YN + G
Sbjct: 376 GLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGY 435
Query: 244 AIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNK 300
I KKA+ ++ M + + ++ T+ +IKG+ + GN A R + GC ++
Sbjct: 436 CILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDE 495
Query: 301 AIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVEL 360
+ L+ C+ ++ AF L + ++ ++D K+ +++ A L+E
Sbjct: 496 WSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEH 555
Query: 361 GKTNSYCRYNLK 372
K S CR N++
Sbjct: 556 MK-RSGCRPNVQ 566
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 82/159 (51%), Gaps = 3/159 (1%)
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
+IK+ K ++ + L + + G+R+ L ++ LL+ G A + M++
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
V+PN+ YNA ++ L + A ++ ++ E++PD FT+ ++I G + +L+ A
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270
Query: 289 RWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCK 324
+ +N K GC N + L+ +C+ G ++ AF+L +
Sbjct: 271 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIR 309
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 86/188 (45%), Gaps = 2/188 (1%)
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
+TA LI Y K + A + + M C V ++N L+ F + L K +
Sbjct: 533 YTA-LIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVM 591
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
+ GI P++V+Y +I GS A + +M ++G +L+T+++L+ G+
Sbjct: 592 IEE-GIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGK 650
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
+AE ++ + + P+ +Y ++ + + + A +G M P ++T+
Sbjct: 651 VEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGV 710
Query: 274 LIKGFVNE 281
LIKG NE
Sbjct: 711 LIKGLKNE 718
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 83/382 (21%), Positives = 165/382 (43%), Gaps = 57/382 (14%)
Query: 26 SVIRGIYKENNL---KRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEH 82
++I G K+ L L++ K+S R N Y + L F EE+
Sbjct: 535 ALIDGYCKDEKLDTATSLLEHMKRSG----CRPNVQTYNVLIHGLTKQNNFSGAEELC-- 588
Query: 83 QKQYKDISKEG-------FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLG 135
K + +EG +TA + L K A ++F++M + C +L++++L+
Sbjct: 589 ----KVMIEEGIFPNVVTYTAMIDGLC-KNGSTSLALEMFNKMIEQGCLPNLLTYSSLIR 643
Query: 136 ACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIR 195
A K +E + LF +L + G+ PD ++Y +I+A++ G ++ A L M K G +
Sbjct: 644 ALGQEGKVEEAENLFAEL-ERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQ 702
Query: 196 LDLITFNTLLLGF-----YSNGRFA------------------DAEKIWET-MVNMNVRP 231
L T+ L+ G ++ R A DA + + ++
Sbjct: 703 PTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGL 762
Query: 232 NVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK--- 288
+V+ NA + L+ + +A EL+G M S+ + PD + +L+ + N++ A
Sbjct: 763 SVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVF 822
Query: 289 RWYNKSGCGMNKAIFKLLVPFVCE---KGDLDFAF-NLCKRTFSERCLVDQAPLQLVVDR 344
+ + GC ++ +K L+ +C+ + + F N+ RT++ D +++D
Sbjct: 823 KHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNP----DDVVQAVLIDG 878
Query: 345 LAKELRVEEAKELVELGKTNSY 366
L ++ + E + + +T Y
Sbjct: 879 LLRDGYKDLCMEFLHIMETRRY 900
>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 909
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 119/247 (48%), Gaps = 5/247 (2%)
Query: 127 VLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLL 186
V ++NAL+ +++FD+ D LFK++ + G+EP+ V+Y +I A +G ++ A L
Sbjct: 361 VFAYNALIDKLCKNERFDDADRLFKEMAGR-GLEPNEVTYAILIHALCKRGMIEDALCLF 419
Query: 187 YEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIE 246
+M KGI++ + +N+L+ G+ G A + MV + P SY+ + GL
Sbjct: 420 DKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRN 479
Query: 247 KQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIF 303
+EL EM + I + +TF ALI GF + ++EA R ++K S N+ F
Sbjct: 480 GDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTF 539
Query: 304 KLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKT 363
+++ C G++ AF L + D + ++ L V +A E V
Sbjct: 540 NVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVA-DLE 598
Query: 364 NSYCRYN 370
NSY N
Sbjct: 599 NSYAVLN 605
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 111/245 (45%), Gaps = 2/245 (0%)
Query: 46 KSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKA 105
K DLG N Y + +L +RF + + + E A LI K
Sbjct: 351 KLGDLGMV-PNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKR 409
Query: 106 AMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVS 165
M E+A +FD+M + + TV +N+L+ D GL + K G+ P S
Sbjct: 410 GMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMV-KEGLTPTAAS 468
Query: 166 YNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMV 225
Y+ +I G L S L EM ++GI + TF L+ GF + + +A ++++ M+
Sbjct: 469 YSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMI 528
Query: 226 NMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLE 285
+ NV PN ++N ++G + +KA +L +M + PD +T+ +LI G +
Sbjct: 529 DSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVS 588
Query: 286 EAKRW 290
+A +
Sbjct: 589 KANEF 593
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 102/231 (44%), Gaps = 3/231 (1%)
Query: 129 SFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
S ALL +F E L+ ++ + G++ DLVS+ I+ A + + + + L E
Sbjct: 608 SLTALLYGFFREGRFTETYHLWDEMAVR-GVKLDLVSFTIIVYAALKQHDKEKSCVLFRE 666
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
M+++G++ D I + ++ A W+ MV PN ++ ++ L
Sbjct: 667 MKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGY 726
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKAI--FKLL 306
A L EM + + P+ FT+ + F EG++E+AK ++ G +I F +L
Sbjct: 727 LGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNIL 786
Query: 307 VPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
+ +C+ G + A +L + D ++ L K + +A EL
Sbjct: 787 IKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFEL 837
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 128/301 (42%), Gaps = 43/301 (14%)
Query: 99 IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKL 157
I Y ++ + AR + M + + + +N L+ G C N + + V+ K++ +
Sbjct: 228 IRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVE--VKNVMVNI 285
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSA-------------------NTLLYEMEKK------ 192
G+ D V+Y T++ F L+ A + ++ E+ KK
Sbjct: 286 GVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEA 345
Query: 193 ----------GIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDG 242
G+ ++ +N L+ N RF DA+++++ M + PN +Y +
Sbjct: 346 FSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHA 405
Query: 243 LAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMN 299
L + AL L +MR K I V+ + +LI G+ +G+L+ A+ + K G
Sbjct: 406 LCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPT 465
Query: 300 KAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV-DQAPLQLVVDRLAKELRVEEAKELV 358
A + L+ +C GDL L R +ER + + +++ K+ +++EA L
Sbjct: 466 AASYSPLIAGLCRNGDLSSCMEL-HREMAERGIAWNNYTFTALINGFCKDKKMDEAARLF 524
Query: 359 E 359
+
Sbjct: 525 D 525
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 63/130 (48%), Gaps = 1/130 (0%)
Query: 126 TVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTL 185
+++SFN L+ + K E L + G PD +SY+TII G ++ A L
Sbjct: 779 SIVSFNILIKGLCKAGKIQEAIDLMSKITES-GFSPDCISYSTIIHELCKMGDINKAFEL 837
Query: 186 LYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAI 245
EM KG++ D++ +N + +G A I+ M+ V+PN +Y A L G+++
Sbjct: 838 WNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISL 897
Query: 246 EKQTKKALEL 255
+AL L
Sbjct: 898 MVSKGQALLL 907
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 110/252 (43%), Gaps = 41/252 (16%)
Query: 148 GLFKDLPHKL---GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
L +DL K+ G+ D Y I+A+ + +LD A L+ ME +G++ + +N L
Sbjct: 203 ALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVL 262
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALE---------- 254
+ G N R +A ++ MVN+ V + +Y + G ++ + AL
Sbjct: 263 MYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGF 322
Query: 255 ---------LVGEMRSKEI----------------NPDVFTFYALIKGFVNEGNLEEAKR 289
++ E+R KE+ P+VF + ALI ++A R
Sbjct: 323 VPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADR 382
Query: 290 WYNK-SGCGM--NKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLA 346
+ + +G G+ N+ + +L+ +C++G ++ A L + + V P +++
Sbjct: 383 LFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYC 442
Query: 347 KELRVEEAKELV 358
K+ ++ A+ L+
Sbjct: 443 KQGSLDRARGLL 454
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 63/130 (48%), Gaps = 2/130 (1%)
Query: 151 KDLPHKL--GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
KDL + G +VS+N +IK G + A L+ ++ + G D I+++T++
Sbjct: 766 KDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHEL 825
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDV 268
G A ++W M+ ++P+V +YN + + ++ KAL + M + P+
Sbjct: 826 CKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNW 885
Query: 269 FTFYALIKGF 278
T+ AL+ G
Sbjct: 886 DTYRALLSGI 895
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 65/152 (42%), Gaps = 4/152 (2%)
Query: 159 IEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAE 218
+ P+ +YN + F +G ++ A L M +G +++FN L+ G G+ +A
Sbjct: 742 VLPNKFTYNCFLDYFATEGDMEKAKDLHSAM-LQGHLASIVSFNILIKGLCKAGKIQEAI 800
Query: 219 KIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGF 278
+ + P+ SY+ + L KA EL EM K + PDV + I+
Sbjct: 801 DLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWC 860
Query: 279 VNEGNLEEAKRWYN---KSGCGMNKAIFKLLV 307
G ++A Y +SG N ++ L+
Sbjct: 861 NVHGESDKALGIYTNMIRSGVQPNWDTYRALL 892
Score = 37.7 bits (86), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 72/185 (38%), Gaps = 7/185 (3%)
Query: 193 GIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKA 252
GI ++ T + +L +FA A +++ M+ V + Y A + + A
Sbjct: 181 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 240
Query: 253 LELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPF 309
LV M S+ + + L+ G ++EA N G ++ ++ LV
Sbjct: 241 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYG 300
Query: 310 VCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV----ELGKTNS 365
C +L+ A + + +A ++D L K+ VEEA L +LG +
Sbjct: 301 FCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPN 360
Query: 366 YCRYN 370
YN
Sbjct: 361 VFAYN 365
>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 136/297 (45%), Gaps = 62/297 (20%)
Query: 86 YKDISKEGFTA------RLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
+ + + GFT LI +GK + + +F++M +C+ V+++NAL+
Sbjct: 79 FTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFC- 137
Query: 140 SKKFDEVDGLFKDLPHKL---GIEPDLVSYNTIIKAFVDKG------------------- 177
KF+ + F+ L H++ G++P++V+Y+T I AF +G
Sbjct: 138 --KFERMPKAFEFL-HEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTP 194
Query: 178 ------SLDSANT----------LLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
SL AN L+ E+ + GI+L+++T+ LL G GR +AE+++
Sbjct: 195 NEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVF 254
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
M+N V PN +Y A + G K+ + A +++ EM+ K I PD+ + ++ G NE
Sbjct: 255 RAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNE 314
Query: 282 GNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGD-----------LDFAFNLCK 324
LEEAK +SG N I+ L+ + G LD LCK
Sbjct: 315 SRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLVDGLCK 371
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 123/254 (48%), Gaps = 4/254 (1%)
Query: 107 MFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSY 166
M E A + F +M S NALL + D FKD+ GI+ + +Y
Sbjct: 1 MLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAA-GIKRSVFTY 59
Query: 167 NTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVN 226
N +I +G L+ A +L +M++ G D++T+N+L+ G G + I+E M +
Sbjct: 60 NIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKD 119
Query: 227 MNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEE 286
+ P+V +YNA ++ ++ KA E + EM++ + P+V T+ I F EG L+E
Sbjct: 120 ADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQE 179
Query: 287 AKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVD 343
A +++ + N+ + L+ C+ G+L A L + ++ ++D
Sbjct: 180 AIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLD 239
Query: 344 RLAKELRVEEAKEL 357
L +E R++EA+E+
Sbjct: 240 GLCEEGRMKEAEEV 253
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 118/283 (41%), Gaps = 27/283 (9%)
Query: 53 FRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDI-SKEGFTARLIALYGKAAMFENA 111
+ N YT + L R + EE+ ++E +TA L+ + KA E A
Sbjct: 227 IKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTA-LVHGFIKAKEMEYA 285
Query: 112 RKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIK 171
+ + EM + + +L + +L N + +E L ++ GI + V Y T++
Sbjct: 286 KDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKES-GINTNAVIYTTLMD 344
Query: 172 AFVDKGSLDSANTLLYEMEK-----------------------KGIRLDLITFNTLLLGF 208
A+ G A TLL EM KG+ D I + L+ G
Sbjct: 345 AYFKSGQATEALTLLEEMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGN 404
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDV 268
+G +A + + M+ + + ++ +Y A + GL+ Q +KA L+ EM K + PD
Sbjct: 405 MKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDE 464
Query: 269 FTFYALIKGFVNEGNLEEAKRWYNK-SGCGMNKAIFKLLVPFV 310
+ LIK + G ++EA N+ + GM + VP V
Sbjct: 465 VVYMCLIKKYYALGKVDEALELQNEMAKRGMITGLSDHAVPSV 507
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 107/261 (40%), Gaps = 27/261 (10%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
+++ G+ +E +K + F+ + G N YT V AK + ++IL+ K+
Sbjct: 236 ALLDGLCEEGRMKEAEEVFRAMLNAG-VAPNQETYTALVHGFIKAKEMEYAKDILKEMKE 294
Query: 86 YKDISKEGFTARLIALYG--KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKK- 142
K I + I L+G + E A+ + E+ + + L+ A S +
Sbjct: 295 -KCIKPDLLLYGTI-LWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQA 352
Query: 143 ----------FDEVDGLFK----DLPHKL-------GIEPDLVSYNTIIKAFVDKGSLDS 181
D VDGL K ++ KL G+ PD ++Y +I + G+L
Sbjct: 353 TEALTLLEEMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQE 412
Query: 182 ANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLD 241
A L M + G+ LDL + L+ G +G+ A + + M+ V P+ Y +
Sbjct: 413 ALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIK 472
Query: 242 GLAIEKQTKKALELVGEMRSK 262
+ +ALEL EM +
Sbjct: 473 KYYALGKVDEALELQNEMAKR 493
>gi|357127090|ref|XP_003565218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Brachypodium distachyon]
Length = 886
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 128/289 (44%), Gaps = 6/289 (2%)
Query: 39 RLVDKFKKSSDLGRFRTNTGI--YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTA 96
R+ + F+ + LG R I Y + + F + ++ E A
Sbjct: 317 RVEEAFRLACQLGELRMVPNIFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYA 376
Query: 97 RLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHK 156
LI K M ++A + D M + TV +N+L+ C D G ++ +
Sbjct: 377 ILIHSLCKRGMMDDALCMLDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMV-E 435
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
+G+ P+ SY+ +I KG L A L +M +KG+ + TF L+ GF + +
Sbjct: 436 IGLTPNAASYSPVIAGLCRKGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDE 495
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
A +++ M N+ PN ++NA ++G + +KA +L +M + + PD +T+ +LI
Sbjct: 496 ASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLIS 555
Query: 277 GFVNEGNLEEAKRWYN--KSGCG-MNKAIFKLLVPFVCEKGDLDFAFNL 322
G +AK + ++ C +NK L+ C +G L A+++
Sbjct: 556 GLCLTDGASKAKEFVADLENNCSVLNKFSLTALLHGFCREGRLTEAYHV 604
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 94/401 (23%), Positives = 158/401 (39%), Gaps = 58/401 (14%)
Query: 1 MSFPSRLLSCSFSTTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIY 60
M F S ++ + A + P VI G+ ++ +L V+ +K ++ G NT +
Sbjct: 427 MGFLSEMVEIGLTPNAASYSP-----VIAGLCRKGDLSGAVELHRKMAEKG-VAWNTYTF 480
Query: 61 TGTVQRLANAKRF----RWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFD 116
T + AK+ R ++ E + +++ F A +I Y A +++D
Sbjct: 481 TALINGFCKAKKMDEASRLFNKMTESNLEPNEVT---FNA-VIEGYCLVGDIRKAFQLYD 536
Query: 117 EMPGR----------------------------------NCEQTVL---SFNALLGACVN 139
+M R NC +VL S ALL
Sbjct: 537 QMMCRGLTPDNYTYRSLISGLCLTDGASKAKEFVADLENNC--SVLNKFSLTALLHGFCR 594
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
+ E ++ ++ G + DL+S+ I+ A + + + + L EM++KG+R D +
Sbjct: 595 EGRLTEAYHVWNEMA-MWGGKLDLISFTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNV 653
Query: 200 TFNTLLLGFYS-NGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
F+T ++ YS G A W+ M+ PN +Y A ++ L A L E
Sbjct: 654 -FHTCMINMYSKEGNMVQALNCWDEMIADGHLPNTVTYTALVNNLCKSWHLSSAELLCKE 712
Query: 259 MRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK--SGCGMNKAIFKLLVPFVCEKGDL 316
M + P+ +TF + F EGNLE AK Y G N L+ C+ G +
Sbjct: 713 MLASHFLPNSYTFNCFLDYFATEGNLETAKDLYFAMLQGFLANIVSVNTLIKGFCKVGQI 772
Query: 317 DFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
A +L R+ D V+ L K+ + EA EL
Sbjct: 773 QEAIDLISRSTENGFFPDCISYSTVIHELCKKGDINEAIEL 813
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 97/226 (42%), Gaps = 6/226 (2%)
Query: 99 IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKL 157
I Y + + A+ + M + + + +N L+ G C N + + VD K+
Sbjct: 204 IRAYCEVRNLDGAKGLVARMQDEGDKVSAVPYNVLIYGLCKNQRVREAVD--VKNSMLAR 261
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ D V+ T++ F LD A + +M + G + +L G GR +A
Sbjct: 262 GVAADEVTCRTLVYGFCRTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEA 321
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ + + + PN+ +YNA L+ + +A LV EM K + P+ T+ LI
Sbjct: 322 FRLACQLGELRMVPNIFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHS 381
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAF 320
G +++A ++ G M + L+ C+K DLD A
Sbjct: 382 LCKRGMMDDALCMLDRMREKGVRMTVYPYNSLINCCCKKDDLDMAM 427
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 83/185 (44%), Gaps = 6/185 (3%)
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
F +I +Y K A +DEM +++ AL+ S + L K++
Sbjct: 654 FHTCMINMYSKEGNMVQALNCWDEMIADGHLPNTVTYTALVNNLCKSWHLSSAELLCKEM 713
Query: 154 --PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSN 211
H L P+ ++N + F +G+L++A L + M +G ++++ NTL+ GF
Sbjct: 714 LASHFL---PNSYTFNCFLDYFATEGNLETAKDLYFAM-LQGFLANIVSVNTLIKGFCKV 769
Query: 212 GRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTF 271
G+ +A + P+ SY+ + L + +A+EL EM K + PD+ +
Sbjct: 770 GQIQEAIDLISRSTENGFFPDCISYSTVIHELCKKGDINEAIELWNEMLYKGVKPDIVAY 829
Query: 272 YALIK 276
LI+
Sbjct: 830 NILIR 834
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 64/128 (50%), Gaps = 2/128 (1%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G ++VS NT+IK F G + A L+ + G D I+++T++ G +A
Sbjct: 751 GFLANIVSVNTLIKGFCKVGQIQEAIDLISRSTENGFFPDCISYSTVIHELCKKGDINEA 810
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++W M+ V+P++ +YN + I ++ K L + +M K + P+ T AL G
Sbjct: 811 IELWNEMLYKGVKPDIVAYNILIRWCNIHGESDKCLGIYIDMVKKGVQPNWHTHRALFVG 870
Query: 278 --FVNEGN 283
+++GN
Sbjct: 871 TSLMSKGN 878
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 116/280 (41%), Gaps = 43/280 (15%)
Query: 133 LLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKK 192
+L + V ++F LF + H G+ D Y I+A+ + +LD A L+ M+ +
Sbjct: 168 ILFSLVKIRQFALARHLFDGMLHS-GVLLDEYVYTAGIRAYCEVRNLDGAKGLVARMQDE 226
Query: 193 GIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKA 252
G ++ + +N L+ G N R +A + +M+ V + + + G ++ A
Sbjct: 227 GDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEVTCRTLVYGFCRTEELDMA 286
Query: 253 LELVGEM-----------------------RSKE------------INPDVFTFYALIKG 277
LE+ G+M R +E + P++F + AL+
Sbjct: 287 LEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRMVPNIFAYNALLNN 346
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
G EA R N+ G N+ + +L+ +C++G +D A + R + +
Sbjct: 347 MCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMREKGVRMT 406
Query: 335 QAPLQLVVDRLAKELRVEEA----KELVELGKTNSYCRYN 370
P +++ K+ ++ A E+VE+G T + Y+
Sbjct: 407 VYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYS 446
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 92/205 (44%), Gaps = 3/205 (1%)
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
+LG P + + ++ KG ++ A L ++ + + ++ +N LL NG F+
Sbjct: 295 RLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRMVPNIFAYNALLNNMCKNGMFS 354
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
+A+++ M + + PN +Y + L AL ++ MR K + V+ + +LI
Sbjct: 355 EADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMREKGVRMTVYPYNSLI 414
Query: 276 KGFVNEGNLEEAKRWYNKS---GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCL 332
+ +L+ A + ++ G N A + ++ +C KGDL A L ++ +
Sbjct: 415 NCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGDLSGAVELHRKMAEKGVA 474
Query: 333 VDQAPLQLVVDRLAKELRVEEAKEL 357
+ +++ K +++EA L
Sbjct: 475 WNTYTFTALINGFCKAKKMDEASRL 499
>gi|297743431|emb|CBI36298.3| unnamed protein product [Vitis vinifera]
Length = 641
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 113/238 (47%), Gaps = 4/238 (1%)
Query: 123 CEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSA 182
C+ ++++N L+ K E D L + K G+ P+ SY +I A+ +G D A
Sbjct: 321 CKPDIVTYNTLISGSCRDGKVSEADQLLEQALGK-GLMPNKFSYTPLIHAYCKQGGYDRA 379
Query: 183 NTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDG 242
+ L EM ++G + DL+T+ L+ G G A I E M+ V P+ YN + G
Sbjct: 380 SNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSG 439
Query: 243 LAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS-GCGMNKA 301
L + + A L+ EM + + PD F + L+ GF+ GNL+EA++ + + GMN
Sbjct: 440 LCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPG 499
Query: 302 I--FKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
I + ++ C+ G + A R D+ V+D K+ ++ A+++
Sbjct: 500 IVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKM 557
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 127/305 (41%), Gaps = 39/305 (12%)
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
FT ++ K E RK+ ++ G+ C ++ +N L+ + +GLF +L
Sbjct: 187 FTCIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIEL 246
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
K G P + +Y II F KG + + LL EM +G+ +++ +NT++ Y +G
Sbjct: 247 KLK-GFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGH 305
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
A + E M+ +P++ +YN + G + + +A +L+ + K + P+ F++
Sbjct: 306 IVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTP 365
Query: 274 LIKGFVNEGNLEEAKRW---------------YNKSGCGM-------------------- 298
LI + +G + A W Y G+
Sbjct: 366 LIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERG 425
Query: 299 ---NKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAK 355
+ I+ +L+ +C+K L A L + L D +VD + ++EA+
Sbjct: 426 VFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEAR 485
Query: 356 ELVEL 360
+L EL
Sbjct: 486 KLFEL 490
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 122/267 (45%), Gaps = 4/267 (1%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I YK ++ + V+ + + G + + Y + + +++LE Q
Sbjct: 295 TIIDARYKHGHIVKAVETIEGMIECG-CKPDIVTYNTLISGSCRDGKVSEADQLLE-QAL 352
Query: 86 YKDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
K + F+ LI Y K ++ A EM R + ++++ AL+ V + + D
Sbjct: 353 GKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVD 412
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
+ + + + G+ PD YN ++ K L +A LL EM + + D + TL
Sbjct: 413 VALTIREKMLER-GVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATL 471
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+ GF NG +A K++E + + P + YNA + G K A+ + M+ + +
Sbjct: 472 VDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHL 531
Query: 265 NPDVFTFYALIKGFVNEGNLEEAKRWY 291
PD FT+ +I G+V + +L+ A++ +
Sbjct: 532 APDEFTYSTVIDGYVKQHDLDGAQKMF 558
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 125/287 (43%), Gaps = 27/287 (9%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENAR------- 112
Y+ ++ LA ++ F +E +LE+ + + + +I Y + + E A
Sbjct: 97 YSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALELYYFVL 156
Query: 113 KVFDEMPGRNCEQTVLSFNALLGACVNSKKFD--EVDGLFKDLPHKL------------- 157
K + P ++L+ LG ++KF V GL K+ KL
Sbjct: 157 KTYTYFPDVIACNSLLNMLVKLGRIEIARKFTCIMVKGLCKE--GKLEEGRKLIEDRWGQ 214
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G P+++ YNT+I + KG ++ AN L E++ KG + T+ ++ GF G F
Sbjct: 215 GCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAI 274
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+++ M + + NV+ YN +D KA+E + M PD+ T+ LI G
Sbjct: 275 DRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISG 334
Query: 278 FVNEGNLEEAKRWYNKS---GCGMNKAIFKLLVPFVCEKGDLDFAFN 321
+G + EA + ++ G NK + L+ C++G D A N
Sbjct: 335 SCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASN 381
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 7/133 (5%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A+ + EM ++ + L+ + + DE LF +L + G+ P +V YN +I
Sbjct: 449 AKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLF-ELTIEKGMNPGIVGYNAMI 507
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
K + G + A + M+K+ + D T++T++ G+ A+K++ MV M +
Sbjct: 508 KGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCK 567
Query: 231 PNVRSYNARLDGL 243
PNV +DGL
Sbjct: 568 PNV------MDGL 574
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 50/109 (45%)
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
PD Y T++ F+ G+LD A L +KG+ ++ +N ++ G+ G DA
Sbjct: 463 PDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMAC 522
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVF 269
M ++ P+ +Y+ +DG + A ++ EM + P+V
Sbjct: 523 INRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVM 571
>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63070, mitochondrial; Flags: Precursor
gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 590
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 147/299 (49%), Gaps = 16/299 (5%)
Query: 25 GSVIRGIYK--ENNLK-RLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILE 81
G+VI G+ K E +L L++K +K G+ + IY + L +++ +++ +
Sbjct: 219 GAVINGLCKRGEPDLALNLLNKMEK----GKIEADVVIYNTIIDGLC---KYKHMDDAFD 271
Query: 82 --HQKQYKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACV 138
++ + K I + FT LI+ + +A ++ +M +N ++ FNAL+ A V
Sbjct: 272 LFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFV 331
Query: 139 NSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL 198
K E + L+ ++ PD+V+YNT+IK F ++ + EM ++G+ +
Sbjct: 332 KEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 391
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
+T+ TL+ GF+ +A+ +++ MV+ V P++ +YN LDGL + AL +
Sbjct: 392 VTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEY 451
Query: 259 MRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKG 314
M+ +++ D+ T+ +I+ G +E+ + + G N + ++ C KG
Sbjct: 452 MQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKG 510
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 90/183 (49%), Gaps = 1/183 (0%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A + D+M + ++F L+ K E L + + K G +PDLV+Y +I
Sbjct: 164 AVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVK-GCQPDLVTYGAVI 222
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
+G D A LL +MEK I D++ +NT++ G DA ++ M ++
Sbjct: 223 NGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIK 282
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
P+V +YN + L + A L+ +M K INPD+ F ALI FV EG L EA++
Sbjct: 283 PDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKL 342
Query: 291 YNK 293
Y++
Sbjct: 343 YDE 345
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 130/272 (47%), Gaps = 13/272 (4%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRF----RWIEEILE 81
++I G+ K ++ D F K G + + Y + L N R+ R + ++LE
Sbjct: 255 TIIDGLCKYKHMDDAFDLFNKMETKG-IKPDVFTYNPLISCLCNYGRWSDASRLLSDMLE 313
Query: 82 HQKQYKDISKE-GFTARLIALYGKAAMFENARKVFDEM-PGRNCEQTVLSFNALLGACVN 139
K+I+ + F LI + K A K++DEM ++C V+++N L+
Sbjct: 314 -----KNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCK 368
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
K+ +E +F+++ + G+ + V+Y T+I F D+A + +M G+ D++
Sbjct: 369 YKRVEEGMEVFREMSQR-GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIM 427
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
T+N LL G +NG A ++E M +++ ++ +Y ++ L + + +L +
Sbjct: 428 TYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSL 487
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLEEAKRWY 291
K + P+V T+ ++ GF +G EEA +
Sbjct: 488 SLKGVKPNVVTYTTMMSGFCRKGLKEEADALF 519
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 102/215 (47%), Gaps = 3/215 (1%)
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
KLG P +V+ N+++ F + A L+ +M + G + D +TF TL+ G + + + +
Sbjct: 138 KLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKAS 197
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
+A + E MV +P++ +Y A ++GL + AL L+ +M +I DV + +I
Sbjct: 198 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTII 257
Query: 276 KGFVNEGNLEEAKRWYNKSGC-GMNKAIFKL--LVPFVCEKGDLDFAFNLCKRTFSERCL 332
G ++++A +NK G+ +F L+ +C G A L +
Sbjct: 258 DGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNIN 317
Query: 333 VDQAPLQLVVDRLAKELRVEEAKELVELGKTNSYC 367
D ++D KE ++ EA++L + + +C
Sbjct: 318 PDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHC 352
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 95/219 (43%), Gaps = 4/219 (1%)
Query: 142 KFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITF 201
K D+ GLF D+ P +V ++ ++ A D +L +M+ GI +L T+
Sbjct: 55 KLDDAIGLFGDMVKSRPF-PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTY 113
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS 261
+ + F + + A I M+ + P++ + N+ L+G + +A+ LV +M
Sbjct: 114 SIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE 173
Query: 262 KEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDF 318
PD TF L+ G EA + GC + + ++ +C++G+ D
Sbjct: 174 MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDL 233
Query: 319 AFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
A NL + + D ++D L K +++A +L
Sbjct: 234 ALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDL 272
>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 918
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 113/237 (47%), Gaps = 4/237 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I Y + +A ++ D M C+ S+ L+ K + GLF ++
Sbjct: 466 IIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDD- 524
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ P+ V+Y +I + LD+A +LL M++ G R ++ T+N L+ G F+ A
Sbjct: 525 GLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGA 584
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
E++ + M+ + PNV +Y A +DGL T ALE+ +M + P++ T+ +LI+
Sbjct: 585 EELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRA 644
Query: 278 FVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERC 331
EG +EEA+ + + G ++ + ++ G ++ AFN R C
Sbjct: 645 LGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGC 701
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 114/246 (46%), Gaps = 13/246 (5%)
Query: 120 GRN-CEQTVLSFNALL-GACV---NSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFV 174
GRN C ++++N ++ G C+ K ++ + + G +LV+YNTIIK +
Sbjct: 417 GRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQR-----GHSANLVTYNTIIKGYC 471
Query: 175 DKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVR 234
D G+ SA +L M G + D ++ L+ GF + A ++ MV+ + PN
Sbjct: 472 DSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEV 531
Query: 235 SYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL---EEAKRWY 291
+Y A +DG +++ A L+ M+ P+V T+ LI G + N EE +
Sbjct: 532 TYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVM 591
Query: 292 NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRV 351
+ G N + ++ +C+ G A + + + CL + ++ L +E +V
Sbjct: 592 IEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKV 651
Query: 352 EEAKEL 357
EEA+ L
Sbjct: 652 EEAENL 657
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/372 (21%), Positives = 157/372 (42%), Gaps = 43/372 (11%)
Query: 40 LVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFT-ARL 98
++D++ + G + N IY + L E I++ + ++S + FT +
Sbjct: 199 VMDRYHRMLSEG-VQPNLLIYNAVINALCKDGNVADAETIMKKVFE-SEMSPDTFTYTSM 256
Query: 99 IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE---------VDG- 148
I + + ++A +VF++M CE ++++ L+ +S + +E + G
Sbjct: 257 ILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGI 316
Query: 149 -------------------------LFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSAN 183
LF D+ +K G EP++ +Y +I G L A
Sbjct: 317 LPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNK-GCEPNVYTYTALISGLCVSGLLKVAI 375
Query: 184 TLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
L + M + G+ + +T+N L+ N R A + M PN+ +YN + G
Sbjct: 376 GLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGY 435
Query: 244 AIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNK 300
I KKA+ ++ M + + ++ T+ +IKG+ + GN A R + GC ++
Sbjct: 436 CILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDE 495
Query: 301 AIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVEL 360
+ L+ C+ ++ AF L + ++ ++D K+ +++ A L+E
Sbjct: 496 WSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEH 555
Query: 361 GKTNSYCRYNLK 372
K S CR N++
Sbjct: 556 MK-RSGCRPNVQ 566
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 82/159 (51%), Gaps = 3/159 (1%)
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
+IK+ K ++ + L + + G+R+ L ++ LL+ G A + M++
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
V+PN+ YNA ++ L + A ++ ++ E++PD FT+ ++I G + +L+ A
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270
Query: 289 RWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCK 324
+ +N K GC N + L+ +C+ G ++ AF+L +
Sbjct: 271 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIR 309
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 86/188 (45%), Gaps = 2/188 (1%)
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
+TA LI Y K + A + + M C V ++N L+ F + L K +
Sbjct: 533 YTA-LIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVM 591
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
+ GI P++V+Y +I GS A + +M ++G +L+T+++L+ G+
Sbjct: 592 IEE-GIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGK 650
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
+AE ++ + + P+ +Y ++ + + + A +G M P ++T+
Sbjct: 651 VEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGV 710
Query: 274 LIKGFVNE 281
LIKG NE
Sbjct: 711 LIKGLKNE 718
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 83/382 (21%), Positives = 165/382 (43%), Gaps = 57/382 (14%)
Query: 26 SVIRGIYKENNL---KRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEH 82
++I G K+ L L++ K+S R N Y + L F EE+
Sbjct: 535 ALIDGYCKDEKLDTATSLLEHMKRSG----CRPNVQTYNVLIHGLTKQNNFSGAEELC-- 588
Query: 83 QKQYKDISKEG-------FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLG 135
K + +EG +TA + L K A ++F++M + C +L++++L+
Sbjct: 589 ----KVMIEEGIFPNVVTYTAMIDGLC-KNGSTSLALEMFNKMIEQGCLPNLLTYSSLIR 643
Query: 136 ACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIR 195
A K +E + LF +L + G+ PD ++Y +I+A++ G ++ A L M K G +
Sbjct: 644 ALGQEGKVEEAENLFAEL-ERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQ 702
Query: 196 LDLITFNTLLLGF-----YSNGRFA------------------DAEKIWET-MVNMNVRP 231
L T+ L+ G ++ R A DA + + ++
Sbjct: 703 PTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGL 762
Query: 232 NVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK--- 288
+V+ NA + L+ + +A EL+G M S+ + PD + +L+ + N++ A
Sbjct: 763 SVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVF 822
Query: 289 RWYNKSGCGMNKAIFKLLVPFVCE---KGDLDFAF-NLCKRTFSERCLVDQAPLQLVVDR 344
+ + GC ++ +K L+ +C+ + + F N+ RT++ D +++D
Sbjct: 823 KHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNP----DDVVQAVLIDG 878
Query: 345 LAKELRVEEAKELVELGKTNSY 366
L ++ + E + + +T Y
Sbjct: 879 LLRDGYKDLCMEFLHIMETRRY 900
>gi|255660782|gb|ACU25560.1| pentatricopeptide repeat-containing protein [Verbena halei]
Length = 418
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 120/232 (51%), Gaps = 4/232 (1%)
Query: 130 FNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEM 189
FN L+ + V + +F D K + P +VS+NT++ ++ G LD L M
Sbjct: 139 FNILMHSFVKEGEIRLAQSVF-DAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAM 197
Query: 190 EKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQT 249
+ G++ D+ T++ L+ G + DA ++++ M++ + PN ++ +DG ++
Sbjct: 198 QASGVQSDVYTYSVLINGLCKASKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNRRV 257
Query: 250 KKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLL 306
A+E+ +M S+ ++PD+ T+ LI G +G+L++A+ ++ G +K + L
Sbjct: 258 DVAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTL 317
Query: 307 VPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
+ C++GDL+ AF KR E +D ++ L +E R +A++++
Sbjct: 318 IDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKML 369
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 106/207 (51%), Gaps = 4/207 (1%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A+ VFD + + +V+SFN L+ + DE L K+ G++ D+ +Y+ +I
Sbjct: 155 AQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRL-KNAMQASGVQSDVYTYSVLI 213
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
+D AN L EM G+ + +TF TL+ G N R A +I++ M++ ++
Sbjct: 214 NGLCKASKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNRRVDVAMEIYKQMLSQSLS 273
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA--- 287
P++ +YN + GL + K+A +L+ EM K + PD T+ LI G EG+LE A
Sbjct: 274 PDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEY 333
Query: 288 KRWYNKSGCGMNKAIFKLLVPFVCEKG 314
++ K ++ + L+ +C++G
Sbjct: 334 RKRMIKENIRLDDVAYTALISGLCQEG 360
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 107/206 (51%), Gaps = 2/206 (0%)
Query: 80 LEHQKQYKDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACV 138
L++ Q + + +T + LI KA+ ++A ++FDEM ++F L+
Sbjct: 193 LKNAMQASGVQSDVYTYSVLINGLCKASKMDDANELFDEMLDNGLVPNGVTFTTLIDGHC 252
Query: 139 NSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL 198
+++ D ++K + + + PDL++YNT+I KG L A L+ EM KG++ D
Sbjct: 253 KNRRVDVAMEIYKQMLSQ-SLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
IT+ TL+ G G A + + M+ N+R + +Y A + GL E ++ A +++ E
Sbjct: 312 ITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371
Query: 259 MRSKEINPDVFTFYALIKGFVNEGNL 284
M S + P++ T+ +I F +G++
Sbjct: 372 MLSVGLKPEIGTYTMIINEFCEKGDV 397
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 101/226 (44%), Gaps = 4/226 (1%)
Query: 102 YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEP 161
Y K + ++ + M + V +++ L+ + K D+ + LF ++ G+ P
Sbjct: 181 YIKLGDLDEGFRLKNAMQASGVQSDVYTYSVLINGLCKASKMDDANELFDEMLDN-GLVP 239
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
+ V++ T+I +D A + +M + + DLIT+NTL+ G G A+ +
Sbjct: 240 NGVTFTTLIDGHCKNRRVDVAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLI 299
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
+ M ++P+ +Y +DG E + A E M + I D + ALI G E
Sbjct: 300 DEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQE 359
Query: 282 GNLEEAKRWYNKS-GCGMNKAI--FKLLVPFVCEKGDLDFAFNLCK 324
G +A++ + G+ I + +++ CEKGD+ L K
Sbjct: 360 GRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCEKGDVWTGLKLLK 405
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 79/160 (49%), Gaps = 1/160 (0%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A +++ +M ++ ++++N L+ + L ++ K G++PD ++Y T+I
Sbjct: 260 AMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMK-GLKPDKITYTTLI 318
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
+G L++A M K+ IRLD + + L+ G GR DAEK+ M+++ ++
Sbjct: 319 DGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
P + +Y ++ + L+L+ EM+ P V T
Sbjct: 379 PEIGTYTMIINEFCEKGDVWTGLKLLKEMQRDGYMPSVVT 418
>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial; Flags: Precursor
Length = 602
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 129/287 (44%), Gaps = 39/287 (13%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A + D M C+ V+++N+++ S L + + + ++ D+ +Y+TII
Sbjct: 177 AVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEER-NVKADVFTYSTII 235
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
+ G +D+A +L EME KGI+ ++T+N+L+ G G++ D + + MV+ +
Sbjct: 236 DSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIV 295
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK-- 288
PNV ++N LD E + ++A EL EM ++ I+P++ T+ L+ G+ + L EA
Sbjct: 296 PNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNM 355
Query: 289 ------------------------------------RWYNKSGCGMNKAIFKLLVPFVCE 312
R +K G N + +LV C+
Sbjct: 356 LDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQ 415
Query: 313 KGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
G + A L + S L D +++D L ++E+A E+ E
Sbjct: 416 SGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFE 462
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 117/225 (52%), Gaps = 4/225 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+ ++ K + A +++ EM R ++++N L+ + E + + DL +
Sbjct: 304 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML-DLMVRN 362
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
PD+V++ ++IK + +D + + K+G+ + +T++ L+ GF +G+ A
Sbjct: 363 KCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLA 422
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
E++++ MV+ V P+V +Y LDGL + +KALE+ +++ +++ + + +I+G
Sbjct: 423 EELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEG 482
Query: 278 FVNEGNLEEAKRWYNKSGC-GM--NKAIFKLLVPFVCEKGDLDFA 319
G +E+A + C G+ N + +++ +C+KG L A
Sbjct: 483 MCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEA 527
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 120/252 (47%), Gaps = 4/252 (1%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
++A +F EM +++ F+ A +K+F+ V K L GI ++ + N
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELN-GIAHNIYTLNI 128
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
+I F A ++L ++ K G D TFNTL+ G + G+ ++A + + MV
Sbjct: 129 MINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENG 188
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
+P+V +YN+ ++G+ T AL+L+ +M + + DVFT+ +I +G ++ A
Sbjct: 189 CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 248
Query: 289 RWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRL 345
+ + G + + LV +C+ G + L K S + + +++D
Sbjct: 249 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 308
Query: 346 AKELRVEEAKEL 357
KE +++EA EL
Sbjct: 309 VKEGKLQEANEL 320
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 110/230 (47%), Gaps = 6/230 (2%)
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
FT+ LI Y ++ KVF + R ++++ L+ S K + LF+++
Sbjct: 371 FTS-LIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM 429
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
G+ PD+++Y ++ D G L+ A + +++K + L ++ + T++ G G+
Sbjct: 430 VSH-GVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGK 488
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
DA ++ ++ V+PNV +Y + GL + +A L+ +M P+ T+
Sbjct: 489 VEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNT 548
Query: 274 LIKGFVNEGNL-EEAKRWYNKSGCGM--NKAIFKLLVPFVCEKGDLDFAF 320
LI+ + +G+L AK CG + + K+++ + G+LD +F
Sbjct: 549 LIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLS-GELDKSF 597
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 99/240 (41%), Gaps = 38/240 (15%)
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
KLG EPD ++NT+IK +G + A L+ M + G + D++T+N+++ G +G +
Sbjct: 151 KLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTS 210
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMR--------------- 260
A + M NV+ +V +Y+ +D L + A+ L EM
Sbjct: 211 LALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 270
Query: 261 --------------------SKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCG 297
S+EI P+V TF L+ FV EG L+EA Y + G
Sbjct: 271 RGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGIS 330
Query: 298 MNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
N + L+ C + L A N+ +C D ++ RV++ ++
Sbjct: 331 PNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKV 390
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 100/225 (44%), Gaps = 9/225 (4%)
Query: 37 LKRLVDKFKKSSDLGR--FRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY---KDISK 91
+KR+ D K ++ + N Y+ VQ + + + EE+ + + D+
Sbjct: 381 VKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMT 440
Query: 92 EGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFK 151
G + GK E A ++F+++ + ++ + ++ K ++ LF
Sbjct: 441 YGILLDGLCDNGK---LEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFC 497
Query: 152 DLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSN 211
LP K G++P++++Y +I KGSL AN LL +ME+ G + T+NTL+ +
Sbjct: 498 SLPCK-GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRD 556
Query: 212 GRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELV 256
G + K+ E M + + S +D L + K L+++
Sbjct: 557 GDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSGELDKSFLDML 601
>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
Length = 946
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 140/329 (42%), Gaps = 21/329 (6%)
Query: 56 NTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVF 115
N YT + AK+ + E+ E + + LI + KA E A ++F
Sbjct: 511 NVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIF 570
Query: 116 DEMPGR---------------NCEQ-TVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGI 159
+ M G N E+ V+++ ALL S + +E L + + G
Sbjct: 571 ERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSME-GC 629
Query: 160 EPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEK 219
EP+ + Y+ +I G LD A + EM + G L T+++L+ ++ R A K
Sbjct: 630 EPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASK 689
Query: 220 IWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFV 279
+ M+ + PNV Y +DGL +T +A +L+ M K P+V T+ A+I GF
Sbjct: 690 VLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFG 749
Query: 280 NEGNLE---EAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQA 336
G +E E G N +++L+ C+ G LD A NL + A
Sbjct: 750 MIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTA 809
Query: 337 PLQLVVDRLAKELRVEEAKELVELGKTNS 365
+ V++ KE +E L E+G+ ++
Sbjct: 810 GYRKVIEGFNKEF-IESLGLLDEIGQDDT 837
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 142/326 (43%), Gaps = 20/326 (6%)
Query: 53 FRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENAR 112
F +T Y+ + L NA + + E K+ ++ ++ + KA + E AR
Sbjct: 438 FIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQAR 497
Query: 113 KVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKA 172
K F+EM C V+++ AL+ A + +KK + LF+ + + G P++V+Y+ +I
Sbjct: 498 KWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSE-GCLPNIVTYSALIDG 556
Query: 173 FVDKGSLDSANTLLYEM----------------EKKGIRLDLITFNTLLLGFYSNGRFAD 216
G ++ A + M + R +++T+ LL GF + R +
Sbjct: 557 HCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEE 616
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
A K+ + M PN Y+A +DGL + +A E+ EM ++T+ +LI
Sbjct: 617 ARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLID 676
Query: 277 GFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV 333
+ + A + +K + C N I+ ++ +C+ G D A+ L + + C
Sbjct: 677 RYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQP 736
Query: 334 DQAPLQLVVDRLAKELRVEEAKELVE 359
+ ++D ++E EL+E
Sbjct: 737 NVVTYTAMIDGFGMIGKIETCLELLE 762
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 78/168 (46%), Gaps = 6/168 (3%)
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
P +YN +I+AF+ LDSA+ + EM +R+D T G++ +A +
Sbjct: 192 PSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTL 251
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
ET N P+ Y + GL ++A++ + MR+ P+V T+ L+ G +N
Sbjct: 252 VET---ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLN 308
Query: 281 EGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKR 325
+ L KR N GC + IF LV C GD +A+ L K+
Sbjct: 309 KKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKK 356
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 110/253 (43%), Gaps = 17/253 (6%)
Query: 107 MFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSY 166
+ + A K + EM ++ ++ ++ K+++ + +++ + G PD +Y
Sbjct: 387 LLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQ-GFIPDTSTY 445
Query: 167 NTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVN 226
+ ++ + ++ A L EM++ G+ D+ T+ ++ F G A K + M
Sbjct: 446 SKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 505
Query: 227 MNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEE 286
+ PNV +Y A + K+ A EL M S+ P++ T+ ALI G G +E+
Sbjct: 506 VGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEK 565
Query: 287 AKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLA 346
A + + + CG VP D+D F +V L +D
Sbjct: 566 ACQIFERM-CGSKD------VP------DVDMYFKQYDDNSERPNVVTYGAL---LDGFC 609
Query: 347 KELRVEEAKELVE 359
K RVEEA++L++
Sbjct: 610 KSHRVEEARKLLD 622
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/299 (19%), Positives = 113/299 (37%), Gaps = 41/299 (13%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I G+ K L + + S+ G F Y+ + R KR ++L +
Sbjct: 638 ALIDGLCKVGKLDEAQEVKTEMSEHG-FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLE 696
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
+I K + A K+ M + C+ V+++ A++ K +
Sbjct: 697 NSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIET 756
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
L + + K G+ P+ V+Y +I G+LD A+ LL EM++ + ++
Sbjct: 757 CLELLERMGSK-GVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVI 815
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVR------------------------------- 234
GF N F ++ + + + + P +
Sbjct: 816 EGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSAT 873
Query: 235 ------SYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+YN+ ++ L + + + A +L EM K + P++ +F +LIKG + EA
Sbjct: 874 LVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEA 932
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 70/417 (16%), Positives = 144/417 (34%), Gaps = 84/417 (20%)
Query: 22 KFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILE 81
+F+ ++R + + +++ + D RFR + Y +Q A R ++
Sbjct: 160 QFLNVLVRKHCRNGSFSIALEELGRLKDF-RFRPSRSTYNCLIQAFLKADRLDS-ASLIH 217
Query: 82 HQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSK 141
+ ++ +GFT R A R+ + N + + L+ +
Sbjct: 218 REMSLANLRMDGFTLRCFAY--SLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEAS 275
Query: 142 KFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITF 201
F+E + P++V+Y+T++ ++K L +L M +G F
Sbjct: 276 LFEEAMDFLNRM-RATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIF 334
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQT------------ 249
N+L+ + ++G + A K+ + MV P YN + + +K +
Sbjct: 335 NSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAEKA 394
Query: 250 -----------------------------KKALELVGEMRSKEINPDVFTFYALIKGFVN 280
+KA ++ EM + PD T+ ++ N
Sbjct: 395 YSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCN 454
Query: 281 -----------------------------------EGNLEEAKRWYNKS---GCGMNKAI 302
G +E+A++W+N+ GC N
Sbjct: 455 ASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVT 514
Query: 303 FKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ L+ + + +A L + SE CL + ++D K +VE+A ++ E
Sbjct: 515 YTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFE 571
>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06710, mitochondrial; Flags: Precursor
gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
Length = 987
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 140/329 (42%), Gaps = 21/329 (6%)
Query: 56 NTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVF 115
N YT + AK+ + E+ E + + LI + KA E A ++F
Sbjct: 552 NVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIF 611
Query: 116 DEMPGR---------------NCEQ-TVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGI 159
+ M G N E+ V+++ ALL S + +E L + + G
Sbjct: 612 ERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSME-GC 670
Query: 160 EPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEK 219
EP+ + Y+ +I G LD A + EM + G L T+++L+ ++ R A K
Sbjct: 671 EPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASK 730
Query: 220 IWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFV 279
+ M+ + PNV Y +DGL +T +A +L+ M K P+V T+ A+I GF
Sbjct: 731 VLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFG 790
Query: 280 NEGNLE---EAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQA 336
G +E E G N +++L+ C+ G LD A NL + A
Sbjct: 791 MIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTA 850
Query: 337 PLQLVVDRLAKELRVEEAKELVELGKTNS 365
+ V++ KE +E L E+G+ ++
Sbjct: 851 GYRKVIEGFNKEF-IESLGLLDEIGQDDT 878
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 142/326 (43%), Gaps = 20/326 (6%)
Query: 53 FRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENAR 112
F +T Y+ + L NA + + E K+ ++ ++ + KA + E AR
Sbjct: 479 FIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQAR 538
Query: 113 KVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKA 172
K F+EM C V+++ AL+ A + +KK + LF+ + + G P++V+Y+ +I
Sbjct: 539 KWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSE-GCLPNIVTYSALIDG 597
Query: 173 FVDKGSLDSANTLLYEM----------------EKKGIRLDLITFNTLLLGFYSNGRFAD 216
G ++ A + M + R +++T+ LL GF + R +
Sbjct: 598 HCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEE 657
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
A K+ + M PN Y+A +DGL + +A E+ EM ++T+ +LI
Sbjct: 658 ARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLID 717
Query: 277 GFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV 333
+ + A + +K + C N I+ ++ +C+ G D A+ L + + C
Sbjct: 718 RYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQP 777
Query: 334 DQAPLQLVVDRLAKELRVEEAKELVE 359
+ ++D ++E EL+E
Sbjct: 778 NVVTYTAMIDGFGMIGKIETCLELLE 803
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 78/168 (46%), Gaps = 6/168 (3%)
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
P +YN +I+AF+ LDSA+ + EM +R+D T G++ +A +
Sbjct: 233 PSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTL 292
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
ET N P+ Y + GL ++A++ + MR+ P+V T+ L+ G +N
Sbjct: 293 VET---ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLN 349
Query: 281 EGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKR 325
+ L KR N GC + IF LV C GD +A+ L K+
Sbjct: 350 KKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKK 397
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 110/253 (43%), Gaps = 17/253 (6%)
Query: 107 MFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSY 166
+ + A K + EM ++ ++ ++ K+++ + +++ + G PD +Y
Sbjct: 428 LLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQ-GFIPDTSTY 486
Query: 167 NTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVN 226
+ ++ + ++ A L EM++ G+ D+ T+ ++ F G A K + M
Sbjct: 487 SKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 546
Query: 227 MNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEE 286
+ PNV +Y A + K+ A EL M S+ P++ T+ ALI G G +E+
Sbjct: 547 VGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEK 606
Query: 287 AKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLA 346
A + + + CG VP D+D F +V L +D
Sbjct: 607 ACQIFERM-CGSKD------VP------DVDMYFKQYDDNSERPNVVTYGAL---LDGFC 650
Query: 347 KELRVEEAKELVE 359
K RVEEA++L++
Sbjct: 651 KSHRVEEARKLLD 663
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/299 (19%), Positives = 113/299 (37%), Gaps = 41/299 (13%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I G+ K L + + S+ G F Y+ + R KR ++L +
Sbjct: 679 ALIDGLCKVGKLDEAQEVKTEMSEHG-FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLE 737
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
+I K + A K+ M + C+ V+++ A++ K +
Sbjct: 738 NSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIET 797
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
L + + K G+ P+ V+Y +I G+LD A+ LL EM++ + ++
Sbjct: 798 CLELLERMGSK-GVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVI 856
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVR------------------------------- 234
GF N F ++ + + + + P +
Sbjct: 857 EGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSAT 914
Query: 235 ------SYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+YN+ ++ L + + + A +L EM K + P++ +F +LIKG + EA
Sbjct: 915 LVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEA 973
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 70/417 (16%), Positives = 144/417 (34%), Gaps = 84/417 (20%)
Query: 22 KFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILE 81
+F+ ++R + + +++ + D RFR + Y +Q A R ++
Sbjct: 201 EFLNVLVRKHCRNGSFSIALEELGRLKDF-RFRPSRSTYNCLIQAFLKADRLDS-ASLIH 258
Query: 82 HQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSK 141
+ ++ +GFT R A R+ + N + + L+ +
Sbjct: 259 REMSLANLRMDGFTLRCFAY--SLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEAS 316
Query: 142 KFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITF 201
F+E + P++V+Y+T++ ++K L +L M +G F
Sbjct: 317 LFEEAMDFLNRM-RATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIF 375
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQT------------ 249
N+L+ + ++G + A K+ + MV P YN + + +K +
Sbjct: 376 NSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKA 435
Query: 250 -----------------------------KKALELVGEMRSKEINPDVFTFYALIKGFVN 280
+KA ++ EM + PD T+ ++ N
Sbjct: 436 YSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCN 495
Query: 281 -----------------------------------EGNLEEAKRWYNKS---GCGMNKAI 302
G +E+A++W+N+ GC N
Sbjct: 496 ASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVT 555
Query: 303 FKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ L+ + + +A L + SE CL + ++D K +VE+A ++ E
Sbjct: 556 YTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFE 612
>gi|255541126|ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548807|gb|EEF50296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1163
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 128/272 (47%), Gaps = 6/272 (2%)
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
F LI YGKA +F+ + +VF+ M +V++FN+LL + + + +F ++
Sbjct: 158 FFNSLIRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEM 217
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
G+ PD ++N +I+ F +D EM + DL+T+NTL+ G G+
Sbjct: 218 LSTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGK 277
Query: 214 FADAEKIWETMV--NMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTF 271
A + MV + N+ P+V +Y + G ++ + +AL + EM SK + P+ T+
Sbjct: 278 VNIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEITY 337
Query: 272 YALIKGFVNEGNLEEAKRWYNKS--GCGM--NKAIFKLLVPFVCEKGDLDFAFNLCKRTF 327
LIKG +++ K+ + + G G + L+ C G+L+ A + ++
Sbjct: 338 NTLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNAGNLNDALEVFEKMM 397
Query: 328 SERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
D A +++ L + E A++L +
Sbjct: 398 VLNVRPDSATYSVLIRNLCQRGNFERAEQLFD 429
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 119/271 (43%), Gaps = 17/271 (6%)
Query: 27 VIRGIYKENNLKRLVDK-FKKSSDLGRFRTNTGI--YTGTVQRLANAKRFRWIEEILEHQ 83
+IRG K + +VD+ F+ ++ RF+ + + Y V L A + ++
Sbjct: 233 LIRGFCKNS----MVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGKVNIAHNVVNGM 288
Query: 84 -KQYKDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSK 141
K+ +++ + T L+ Y + A VF+EM + + +++N L+ +
Sbjct: 289 VKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEITYNTLIKGLCEVQ 348
Query: 142 KFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITF 201
K D++ +F+ G PD + NT++ A + G+L+ A + +M +R D T+
Sbjct: 349 KIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNAGNLNDALEVFEKMMVLNVRPDSATY 408
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNV-------RPNVRSYNARLDGLAIEKQTKKALE 254
+ L+ G F AE++++ + + P V +Y + + L +T KA E
Sbjct: 409 SVLIRNLCQRGNFERAEQLFDELSEKEILLRDDGCTPLVAAYKSMFEFLCRNGKTAKA-E 467
Query: 255 LVGEMRSKEINPDVFTFYALIKGFVNEGNLE 285
V K D +F LIKG EG E
Sbjct: 468 RVFRQLMKRGTQDPLSFKILIKGHCREGTFE 498
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 88/174 (50%), Gaps = 7/174 (4%)
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKG---IRLDLITFNTLLLGFYSNG 212
+LG + SY +++ +L+ A L+ ++++ ++L+ FN+L+ + G
Sbjct: 111 ELGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRRSNGTVKLEDRFFNSLIRSYGKAG 170
Query: 213 RFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK-EINPDVFTF 271
F ++ +++ +M ++ V P+V ++N+ L L +T A + EM S + PD +TF
Sbjct: 171 LFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEMLSTYGVTPDTYTF 230
Query: 272 YALIKGFVNEGNLEEAKRWYNKSG---CGMNKAIFKLLVPFVCEKGDLDFAFNL 322
LI+GF ++E R++ + C + + LV +C G ++ A N+
Sbjct: 231 NILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGKVNIAHNV 284
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/277 (18%), Positives = 118/277 (42%), Gaps = 19/277 (6%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
+++RG ++ + + F++ G + N Y ++ L ++ I++I E
Sbjct: 304 TLVRGYCMKHEIDEALVVFEEMVSKG-LKPNEITYNTLIKGLCEVQKIDKIKQIFEGA-- 360
Query: 86 YKDISKEGFTA------RLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
+ GF L+ + A +A +VF++M N +++ L+
Sbjct: 361 ---LGGGGFIPDTCTLNTLMNAHCNAGNLNDALEVFEKMMVLNVRPDSATYSVLIRNLCQ 417
Query: 140 SKKFDEVDGLFKDLPHKL------GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKG 193
F+ + LF +L K G P + +Y ++ + G A + ++ K+G
Sbjct: 418 RGNFERAEQLFDELSEKEILLRDDGCTPLVAAYKSMFEFLCRNGKTAKAERVFRQLMKRG 477
Query: 194 IRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKAL 253
+ D ++F L+ G G F ++ M+ + P++ +Y + +DGL + + A
Sbjct: 478 TQ-DPLSFKILIKGHCREGTFEAGYELLVLMLRRDFVPDLETYQSLIDGLLQKGEPLVAY 536
Query: 254 ELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
+ + +M P+ TF++++ + +G E+ R+
Sbjct: 537 QTLEKMIKSSHVPETSTFHSILARLLAKGCAHESARF 573
Score = 38.5 bits (88), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 94/231 (40%), Gaps = 14/231 (6%)
Query: 36 NLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFT 95
NL ++ F+K L R ++ Y+ ++ L F E++ + + + + ++
Sbjct: 385 NLNDALEVFEKMMVLN-VRPDSATYSVLIRNLCQRGNFERAEQLFDELSEKEILLRDDGC 443
Query: 96 ARLIALYGKAAMFE---------NARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEV 146
L+A Y +MFE A +VF ++ R Q LSF L+ F+
Sbjct: 444 TPLVAAY--KSMFEFLCRNGKTAKAERVFRQLMKRGT-QDPLSFKILIKGHCREGTFEAG 500
Query: 147 DGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLL 206
L L + PDL +Y ++I + KG A L +M K + TF+++L
Sbjct: 501 YELLV-LMLRRDFVPDLETYQSLIDGLLQKGEPLVAYQTLEKMIKSSHVPETSTFHSILA 559
Query: 207 GFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
+ G ++ + M+ +R N+ + L KA ++VG
Sbjct: 560 RLLAKGCAHESARFIMLMLEGKIRQNINLSTHTVRLLFGSGLRDKAFKIVG 610
>gi|449438480|ref|XP_004137016.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 156/343 (45%), Gaps = 20/343 (5%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRF-RWIEEILEHQKQ 85
+I+G K L++ ++KF+ ++ + + Y +Q + + F + LE +++
Sbjct: 259 MIKGYCKAGKLQKAMEKFR-DMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEER 317
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
+I ++ + L + E A VF+ M + C V + AL+ + + +E
Sbjct: 318 GLEIPPHSYSLVIGGLCKQRKCME-AYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEE 376
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
LF+ + ++ G EPD V+Y+ ++ G LD L KG+ ++ + + +L+
Sbjct: 377 AMRLFERMKNE-GFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLI 435
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEIN 265
G GR DAE ++E M + YNA +D LA + +AL L G M + +
Sbjct: 436 DGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCD 495
Query: 266 PDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLC-K 324
V+TF LI G E EEA +++ +K I K + P V L LC K
Sbjct: 496 QTVYTFTILIDGLFKEHKNEEAIKFW-------DKMIDKGITPTVASFRALAIGLCLCGK 548
Query: 325 RTFSERCLVDQAPLQLV--------VDRLAKELRVEEAKELVE 359
+ + L D AP+ ++ ++ L K R++EA +L +
Sbjct: 549 VARACKILDDLAPMGIIPETAFEDMINTLCKAQRIKEACKLAD 591
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 128/281 (45%), Gaps = 10/281 (3%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI +G + E V+ M + ++ ++N L+ VNS + + +F+ +
Sbjct: 189 LIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGG- 247
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
I PD V+YN +IK + G L A +ME K ++ D IT+ TL+ YS F
Sbjct: 248 KIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTC 307
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ M + SY+ + GL +++ +A + M K +V + ALI
Sbjct: 308 LSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDS 367
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
+ G++EEA R + + G + + +LV +C+ G LD L ++ ++
Sbjct: 368 YSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAIN 427
Query: 335 QAPLQLVVDRLAKELRVEEA----KELVELG-KTNSYCRYN 370
++D L K R+E+A +E+ E G +SYC YN
Sbjct: 428 AMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYC-YN 467
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 100/240 (41%), Gaps = 44/240 (18%)
Query: 167 NTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVN 226
N++IK+F + G ++ + M++ GI L T+N L+ G ++ AEK++E M
Sbjct: 187 NSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDG 246
Query: 227 MNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEE 286
+ P+ +YN + G + +KA+E +M K + PD T+ LI+ +E + +
Sbjct: 247 GKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDT 306
Query: 287 AKRWY--------------------------------------NKSGCGMNKAIFKLLVP 308
Y N+ GC N AI+ L+
Sbjct: 307 CLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALID 366
Query: 309 FVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKTNSYCR 368
+ G ++ A L +R +E D ++V+ L K R+++ EL + +CR
Sbjct: 367 SYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFD------FCR 420
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 87/208 (41%), Gaps = 6/208 (2%)
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
++I+ L + +E++ +G+ + N+L+ F + G + +W M
Sbjct: 153 SLIELLTFSADLVKIRLVFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKEN 212
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+ P++ +YN ++GL + A ++ M +I PD T+ +IKG+ G L++A
Sbjct: 213 GIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKA 272
Query: 288 K---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCL-VDQAPLQLVVD 343
R +K + L+ + D D +L ER L + LV+
Sbjct: 273 MEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSL-YLEMEERGLEIPPHSYSLVIG 331
Query: 344 RLAKELRVEEAKELVELGKTNSYCRYNL 371
L K+ + EA + E CR N+
Sbjct: 332 GLCKQRKCMEAYAVFETMNQKG-CRANV 358
>gi|297808491|ref|XP_002872129.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297317966|gb|EFH48388.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 588
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 149/343 (43%), Gaps = 13/343 (3%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLG----RFRTNTGIYTGTVQRLANAKRFRWIEEILE 81
++I+G+ NN+ + + F + G R N ++ + + + +EEIL+
Sbjct: 194 TLIKGLCSVNNVDKALYLFSTLNKYGIKPNRVTCNIIVHALCQKGVIGNNNTKLLEEILD 253
Query: 82 HQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSK 141
+ + T + + + + + A +V+ EM +N + +N ++ +S
Sbjct: 254 SSQVNAPLDIVTCTILMDSCFKNGNVVQ-ALEVWKEMSQKNVPTDSVVYNVIIRGLCSSG 312
Query: 142 KFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITF 201
G D+ K G+ PD+ +YNT+I A G D A L M+ G+ D I++
Sbjct: 313 NMVAAYGFMCDMV-KRGVNPDVFTYNTLISALCKAGKFDVACDLHGTMQNVGVAPDQISY 371
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS 261
++ G G A + ++M+ ++ P V +N +DG T AL ++ M S
Sbjct: 372 KVIIQGLCIQGDVDRANEFLQSMLKRSLLPEVLLWNVVIDGYGRYGDTSCALSVLNLMLS 431
Query: 262 KEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNK-----AIFKLLVPFVCEKGDL 316
+ P+V+T ALI G+V G L +A W+ K+ K + LLV C G L
Sbjct: 432 YGVKPNVYTNNALIHGYVKGGRLIDA--WWVKNEMRSTKIHPDTTTYNLLVGAACTLGHL 489
Query: 317 DFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
AF L C D +V L + R++EA+ L+
Sbjct: 490 RLAFQLYDEMLKRGCQPDIITYTELVRGLCWKGRLKEAESLLS 532
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 115/241 (47%), Gaps = 4/241 (1%)
Query: 117 EMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDK 176
+M R V ++N L+ A + KFD L + +G+ PD +SY II+ +
Sbjct: 323 DMVKRGVNPDVFTYNTLISALCKAGKFDVACDLHGTM-QNVGVAPDQISYKVIIQGLCIQ 381
Query: 177 GSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSY 236
G +D AN L M K+ + +++ +N ++ G+ G + A + M++ V+PNV +
Sbjct: 382 GDVDRANEFLQSMLKRSLLPEVLLWNVVIDGYGRYGDTSCALSVLNLMLSYGVKPNVYTN 441
Query: 237 NARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---K 293
NA + G + A + EMRS +I+PD T+ L+ G+L A + Y+ K
Sbjct: 442 NALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLVGAACTLGHLRLAFQLYDEMLK 501
Query: 294 SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEE 353
GC + + LV +C KG L A +L R +D P ++V + + R +E
Sbjct: 502 RGCQPDIITYTELVRGLCWKGRLKEAESLLSRMQVSGITMDHVPFLILVKKYTRLQRPDE 561
Query: 354 A 354
A
Sbjct: 562 A 562
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 118/297 (39%), Gaps = 56/297 (18%)
Query: 65 QRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCE 124
+ + K F + + + H +D+ +G AL+ + M R F +PG
Sbjct: 105 ESVCQTKNFEYDDSLSIHSSIMRDLCLQGKMDA--ALWLREKML---RSGF--IPG---- 153
Query: 125 QTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANT 184
++ N LL ++ DGL +++ ++G P+ VSYNT+IK ++D A
Sbjct: 154 --LIMHNHLLNGLCKLGYIEKADGLVREM-REMGPSPNCVSYNTLIKGLCSVNNVDKALY 210
Query: 185 LLYEMEKKGIR---------------------------------------LDLITFNTLL 205
L + K GI+ LD++T L+
Sbjct: 211 LFSTLNKYGIKPNRVTCNIIVHALCQKGVIGNNNTKLLEEILDSSQVNAPLDIVTCTILM 270
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEIN 265
+ NG A ++W+ M NV + YN + GL A + +M + +N
Sbjct: 271 DSCFKNGNVVQALEVWKEMSQKNVPTDSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVN 330
Query: 266 PDVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFA 319
PDVFT+ LI G + A + G ++ +K+++ +C +GD+D A
Sbjct: 331 PDVFTYNTLISALCKAGKFDVACDLHGTMQNVGVAPDQISYKVIIQGLCIQGDVDRA 387
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++P++ + N +I +V G L A + EM I D T+N L+ + G A
Sbjct: 433 GVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLVGAACTLGHLRLA 492
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++++ M+ +P++ +Y + GL + + K+A L+ M+ I D F L+K
Sbjct: 493 FQLYDEMLKRGCQPDIITYTELVRGLCWKGRLKEAESLLSRMQVSGITMDHVPFLILVKK 552
Query: 278 FVNEGNLEEAKRWYNK 293
+ +EA Y K
Sbjct: 553 YTRLQRPDEAYLVYKK 568
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/244 (20%), Positives = 93/244 (38%), Gaps = 42/244 (17%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G P L+ +N ++ G ++ A+ L+ EM + G + +++NTL+ G S A
Sbjct: 149 GFIPGLIMHNHLLNGLCKLGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKA 208
Query: 218 EKIWETMVNMNVRPN------------------------------VRSYNARLDGLAI-- 245
++ T+ ++PN NA LD +
Sbjct: 209 LYLFSTLNKYGIKPNRVTCNIIVHALCQKGVIGNNNTKLLEEILDSSQVNAPLDIVTCTI 268
Query: 246 -------EKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSG 295
+ALE+ EM K + D + +I+G + GN+ A + K G
Sbjct: 269 LMDSCFKNGNVVQALEVWKEMSQKNVPTDSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRG 328
Query: 296 CGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAK 355
+ + L+ +C+ G D A +L + DQ ++++ L + V+ A
Sbjct: 329 VNPDVFTYNTLISALCKAGKFDVACDLHGTMQNVGVAPDQISYKVIIQGLCIQGDVDRAN 388
Query: 356 ELVE 359
E ++
Sbjct: 389 EFLQ 392
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 1/108 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI Y K +A V +EM ++N L+GA L+ ++ K
Sbjct: 444 LIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLVGAACTLGHLRLAFQLYDEM-LKR 502
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
G +PD+++Y +++ KG L A +LL M+ GI +D + F L+
Sbjct: 503 GCQPDIITYTELVRGLCWKGRLKEAESLLSRMQVSGITMDHVPFLILV 550
>gi|224076898|ref|XP_002305039.1| predicted protein [Populus trichocarpa]
gi|222848003|gb|EEE85550.1| predicted protein [Populus trichocarpa]
Length = 800
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 125/265 (47%), Gaps = 4/265 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+ Y A M + A ++ R + +FN L+ + + K D ++K L L
Sbjct: 170 LVKSYVTAGMLDEAINALFQIKRRGFLPHIFTFNYLMNKLIANGKVDAALAIYKQLK-SL 228
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ P+ +Y+ IIKAF KGSL A+ + EME G+ + + T + G +N R
Sbjct: 229 GLNPNDYTYSIIIKAFCRKGSLVEASNVFQEMELCGVIPNAYAYTTYIEGLCANQRSDFG 288
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ + N+ +V +Y A + G E + +A ++G+M +E+ D + LI+G
Sbjct: 289 YQVLQAWKEGNIPIDVYAYVAVIRGFCNEMKMDRAEVVLGDMEKQELISDARCYSELIRG 348
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
+ G+L +A +N G N I ++ + CEKG KR R +D
Sbjct: 349 YCKAGDLSKALALHNDMESKGIKTNCVIVSTILQYFCEKGMHSQVVEEFKRFKDLRIFLD 408
Query: 335 QAPLQLVVDRLAKELRVEEAKELVE 359
+ +VVD L K +V++A L++
Sbjct: 409 EVSYNIVVDALCKLEKVDQAVALLD 433
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 135/301 (44%), Gaps = 8/301 (2%)
Query: 51 GRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFEN 110
G + Y ++ N + E +L ++ + IS + LI Y KA
Sbjct: 298 GNIPIDVYAYVAVIRGFCNEMKMDRAEVVLGDMEKQELISDARCYSELIRGYCKAGDLSK 357
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A + ++M + + + + +L +V FK L I D VSYN ++
Sbjct: 358 ALALHNDMESKGIKTNCVIVSTILQYFCEKGMHSQVVEEFKRFK-DLRIFLDEVSYNIVV 416
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
A +D A LL EM+ K + +D++ + TL+ G+ G+ DA +++E M +
Sbjct: 417 DALCKLEKVDQAVALLDEMKGKQMDMDIMHYTTLINGYCHVGKLVDAFRVFEEMEGKGLE 476
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
P+V ++N L + +AL+L M+S+++ P+ T +I+G G + EA+ +
Sbjct: 477 PDVVTFNILLAAFSRRGLANEALKLYEYMKSQDLKPNAITHNVMIEGLCIGGKVTEAEAF 536
Query: 291 YNKSGCGM-NKAI--FKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAK 347
+ C M +K+I + ++ CE + A L L+D+ + ++++L +
Sbjct: 537 F----CNMEDKSIDNYGAMITGYCEAKHTEKASELFFELSERGLLMDRGYIYKLLEKLCE 592
Query: 348 E 348
E
Sbjct: 593 E 593
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 85/179 (47%), Gaps = 12/179 (6%)
Query: 118 MPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKG 177
M N E + + ++ AC + + +F D+ K G+ PD+ +Y T+I +
Sbjct: 606 MLDLNMEPSKDMYGKVITACYRAGDMRNAEAVF-DILRKSGLTPDIFTYTTMINVCCRQN 664
Query: 178 SLDSANTLLYEMEKKGIRLDLITFNTLLLGF---YSNGRFA--------DAEKIWETMVN 226
L A L +M+ +GI+ DL+TF LL G + FA A IW+ M N
Sbjct: 665 RLSEARNLFQDMKHRGIKPDLVTFTVLLDGHLKRVHSEAFARKRKEVNLAASNIWKEMQN 724
Query: 227 MNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLE 285
+RP+V Y A +DG + + A+ L EM + + PD T AL+ G N G+++
Sbjct: 725 TEIRPDVICYTALIDGHCKVDRLEDAIGLYDEMMYRGVEPDRATCTALLSGCRNRGDVD 783
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 108/248 (43%), Gaps = 16/248 (6%)
Query: 87 KDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEV 146
+D S + + A +I Y +A E A ++F E+ R LL + D
Sbjct: 541 EDKSIDNYGA-MITGYCEAKHTEKASELFFELSERGLLMDRGYIYKLLEKLCEEGEKDRA 599
Query: 147 DGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLL 206
L K + L +EP Y +I A G + +A + + K G+ D+ T+ T++
Sbjct: 600 LWLLKTML-DLNMEPSKDMYGKVITACYRAGDMRNAEAVFDILRKSGLTPDIFTYTTMIN 658
Query: 207 GFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL-------AIEKQTKK----ALEL 255
R ++A +++ M + ++P++ ++ LDG A ++ K+ A +
Sbjct: 659 VCCRQNRLSEARNLFQDMKHRGIKPDLVTFTVLLDGHLKRVHSEAFARKRKEVNLAASNI 718
Query: 256 VGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCE 312
EM++ EI PDV + ALI G LE+A Y++ G ++A L+
Sbjct: 719 WKEMQNTEIRPDVICYTALIDGHCKVDRLEDAIGLYDEMMYRGVEPDRATCTALLSGCRN 778
Query: 313 KGDLDFAF 320
+GD+D
Sbjct: 779 RGDVDMVL 786
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/305 (20%), Positives = 127/305 (41%), Gaps = 35/305 (11%)
Query: 19 TGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEE 78
T + ++++ ++ ++V++FK+ DL F Y V L ++
Sbjct: 372 TNCVIVSTILQYFCEKGMHSQVVEEFKRFKDLRIFLDEVS-YNIVVDALCKLEKVDQAVA 430
Query: 79 ILEHQK-QYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGAC 137
+L+ K + D+ +T LI Y +A +VF+EM G+ E V++FN LL A
Sbjct: 431 LLDEMKGKQMDMDIMHYTT-LINGYCHVGKLVDAFRVFEEMEGKGLEPDVVTFNILLAAF 489
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKG---------------SLDS- 181
+E L++ + + ++P+ +++N +I+ G S+D+
Sbjct: 490 SRRGLANEALKLYEYMKSQ-DLKPNAITHNVMIEGLCIGGKVTEAEAFFCNMEDKSIDNY 548
Query: 182 ---------------ANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVN 226
A+ L +E+ ++G+ +D LL G A + +TM++
Sbjct: 549 GAMITGYCEAKHTEKASELFFELSERGLLMDRGYIYKLLEKLCEEGEKDRALWLLKTMLD 608
Query: 227 MNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEE 286
+N+ P+ Y + + A + +R + PD+FT+ +I + L E
Sbjct: 609 LNMEPSKDMYGKVITACYRAGDMRNAEAVFDILRKSGLTPDIFTYTTMINVCCRQNRLSE 668
Query: 287 AKRWY 291
A+ +
Sbjct: 669 ARNLF 673
>gi|225433712|ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Vitis vinifera]
Length = 746
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 122/269 (45%), Gaps = 6/269 (2%)
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
F LI YG A +F+ + KVF M +V++FN+LL + + LF ++
Sbjct: 167 FFNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEM 226
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
G+ PD ++N +I+ F +D EM + D++T+NTL+ G G+
Sbjct: 227 LDTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGK 286
Query: 214 FADAEKIWETMV--NMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTF 271
A + + MV + N+ PNV +Y + G +++ +AL L+ EM S+ + P+ T+
Sbjct: 287 VKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITY 346
Query: 272 YALIKGFVNEGNLEEAKR----WYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTF 327
LI+G L++ K G + L+ C G L+ AF++ ++
Sbjct: 347 NTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMS 406
Query: 328 SERCLVDQAPLQLVVDRLAKELRVEEAKE 356
R D A ++V L + A+E
Sbjct: 407 ELRVQPDSATYSVLVRSLCQRGDFRRAEE 435
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 108/248 (43%), Gaps = 12/248 (4%)
Query: 49 DLGRFRTNTGI--YTGTVQRLANAKRFRWIEEILEHQ-KQYKDISKEGFT-ARLIALYGK 104
++ RF+ + + Y V L A + + +++ K+ ++S T LI Y
Sbjct: 261 EMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCM 320
Query: 105 AAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLV 164
A + EM R + +++N L+ ++K D++ + + + G PD
Sbjct: 321 KQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTC 380
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
+ NT+IKA G L+ A ++ +M + ++ D T++ L+ G F AE+ ++ +
Sbjct: 381 TLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDEL 440
Query: 225 V-------NMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ +P V +YN + L +TKKA E V K D ++ LI G
Sbjct: 441 AEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKA-ERVFRQLMKRGTQDPPSYKTLILG 499
Query: 278 FVNEGNLE 285
EG E
Sbjct: 500 HCREGTPE 507
Score = 45.1 bits (105), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 118/293 (40%), Gaps = 38/293 (12%)
Query: 108 FENARKVFDEMPGR-------NCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIE 160
F A + FDE+ + C+ V ++N + ++ K + + +F+ L + +
Sbjct: 430 FRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQD 489
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
P SY T+I +G+ ++ LL M ++ D T+ ++ G G A K
Sbjct: 490 PP--SYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKS 547
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI--NPDVFTFYALI--- 275
E M+ + P +++ L L + ++ LV M + I N D+ T +
Sbjct: 548 LEKMLKSSHLPTTAIFHSILAALVEKGCAHESASLVKLMLERRIRQNIDLSTHTVRLLYK 607
Query: 276 -----KGFVNEGNLEEAKRWYNKSGCGMNKAIFKL--LVPFVCEKGDLDFAFNLCKRTFS 328
K F+ G L E N + K+ LV F+C+ L A + +
Sbjct: 608 SGLQDKAFMTIGLLYE------------NGYLVKMEELVSFLCQSRKLLEAQKMLLFSLE 655
Query: 329 ERCLVDQAPLQLVVDRLAKELRVEEA----KELVELGKTNSY-CRYNLKFPSE 376
+R VD V+ L K +V EA ELVE G + C+ +L+ E
Sbjct: 656 KRQSVDIDMCSTVISGLCKAHKVSEAFALYYELVEKGMQHRLTCQEDLRISLE 708
>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
Length = 918
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 113/237 (47%), Gaps = 4/237 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I Y + +A ++ D M C+ S+ L+ K + GLF ++
Sbjct: 466 IIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDD- 524
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ P+ V+Y +I + LD+A +LL M++ G R ++ T+N L+ G F+ A
Sbjct: 525 GLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGA 584
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
E++ + M+ + PNV +Y A +DGL T ALE+ +M + P++ T+ +LI+
Sbjct: 585 EELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRA 644
Query: 278 FVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERC 331
EG +EEA+ + + G ++ + ++ G ++ AFN R C
Sbjct: 645 LGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGC 701
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 114/246 (46%), Gaps = 13/246 (5%)
Query: 120 GRN-CEQTVLSFNALL-GACV---NSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFV 174
GRN C ++++N ++ G C+ K ++ + + G +LV+YNTIIK +
Sbjct: 417 GRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQR-----GHSANLVTYNTIIKGYC 471
Query: 175 DKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVR 234
D G+ SA +L M G + D ++ L+ GF + A ++ MV+ + PN
Sbjct: 472 DSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEV 531
Query: 235 SYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL---EEAKRWY 291
+Y A +DG +++ A L+ M+ P+V T+ LI G + N EE +
Sbjct: 532 TYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVM 591
Query: 292 NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRV 351
+ G N + ++ +C+ G A + + + CL + ++ L +E +V
Sbjct: 592 IEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKV 651
Query: 352 EEAKEL 357
EEA+ L
Sbjct: 652 EEAENL 657
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/372 (21%), Positives = 157/372 (42%), Gaps = 43/372 (11%)
Query: 40 LVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFT-ARL 98
++D++ + G + N IY + L E I++ + ++S + FT +
Sbjct: 199 VMDRYHRMLSEG-VQPNLLIYNAVINALCKDGNVADAETIMKKVFE-SEMSPDTFTYTSM 256
Query: 99 IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE---------VDG- 148
I + + ++A +VF++M CE ++++ L+ +S + +E + G
Sbjct: 257 ILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGI 316
Query: 149 -------------------------LFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSAN 183
LF D+ +K G EP++ +Y +I G L A
Sbjct: 317 LPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNK-GCEPNVYTYTALISGLCVSGILKVAI 375
Query: 184 TLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
L + M + G+ + +T+N L+ N R A + M PN+ +YN + G
Sbjct: 376 GLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGY 435
Query: 244 AIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNK 300
I KKA+ ++ M + + ++ T+ +IKG+ + GN A R + GC ++
Sbjct: 436 CILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDE 495
Query: 301 AIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVEL 360
+ L+ C+ ++ AF L + ++ ++D K+ +++ A L+E
Sbjct: 496 WSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEH 555
Query: 361 GKTNSYCRYNLK 372
K S CR N++
Sbjct: 556 MK-RSGCRPNVQ 566
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 82/159 (51%), Gaps = 3/159 (1%)
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
+IK+ K ++ + L + + G+R+ L ++ LL+ G A + M++
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
V+PN+ YNA ++ L + A ++ ++ E++PD FT+ ++I G + +L+ A
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270
Query: 289 RWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCK 324
+ +N K GC N + L+ +C+ G ++ AF+L +
Sbjct: 271 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIR 309
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 86/188 (45%), Gaps = 2/188 (1%)
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
+TA LI Y K + A + + M C V ++N L+ F + L K +
Sbjct: 533 YTA-LIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVM 591
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
+ GI P++V+Y +I GS A + +M ++G +L+T+++L+ G+
Sbjct: 592 IEE-GIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGK 650
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
+AE ++ + + P+ +Y ++ + + + A +G M P ++T+
Sbjct: 651 VEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGV 710
Query: 274 LIKGFVNE 281
LIKG NE
Sbjct: 711 LIKGLKNE 718
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 83/382 (21%), Positives = 165/382 (43%), Gaps = 57/382 (14%)
Query: 26 SVIRGIYKENNL---KRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEH 82
++I G K+ L L++ K+S R N Y + L F EE+
Sbjct: 535 ALIDGYCKDEKLDTATSLLEHMKRSG----CRPNVQTYNVLIHGLTKQNNFSGAEELC-- 588
Query: 83 QKQYKDISKEG-------FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLG 135
K + +EG +TA + L K A ++F++M + C +L++++L+
Sbjct: 589 ----KVMIEEGIFPNVVTYTAMIDGLC-KNGSTSLALEMFNKMIEQGCLPNLLTYSSLIR 643
Query: 136 ACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIR 195
A K +E + LF +L + G+ PD ++Y +I+A++ G ++ A L M K G +
Sbjct: 644 ALGQEGKVEEAENLFAEL-ERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQ 702
Query: 196 LDLITFNTLLLGF-----YSNGRFA------------------DAEKIWET-MVNMNVRP 231
L T+ L+ G ++ R A DA + + ++
Sbjct: 703 PTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGL 762
Query: 232 NVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK--- 288
+V+ NA + L+ + +A EL+G M S+ + PD + +L+ + N++ A
Sbjct: 763 SVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVF 822
Query: 289 RWYNKSGCGMNKAIFKLLVPFVCE---KGDLDFAF-NLCKRTFSERCLVDQAPLQLVVDR 344
+ + GC ++ +K L+ +C+ + + F N+ RT++ D +++D
Sbjct: 823 KHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNP----DDVVQAVLIDG 878
Query: 345 LAKELRVEEAKELVELGKTNSY 366
L ++ + E + + +T Y
Sbjct: 879 LLRDGYKDLCMEFLHIMETRRY 900
>gi|449444614|ref|XP_004140069.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Cucumis sativus]
gi|449528063|ref|XP_004171026.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Cucumis sativus]
Length = 536
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 104/199 (52%), Gaps = 4/199 (2%)
Query: 129 SFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
+ N ++ AC + D+ + +F+++ +G P++ SYNT+I + +KG L SA L
Sbjct: 240 TLNLVICACCKLGRLDKANVVFEEM-GTMGFSPNVASYNTLIAGYCNKGLLSSAMKLRSV 298
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
MEK G+ D++TFNTL+ GF G+ +A K++ M M++ P +YN ++G +
Sbjct: 299 MEKNGVPPDVVTFNTLVNGFCKVGKLQEASKLFGEMKGMSLSPTTVTYNILINGYSKAGN 358
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK---RWYNKSGCGMNKAIFKL 305
+ L EM ++ D+ T+ ALI G EG ++A R ++ G N + F
Sbjct: 359 CEMGNRLFEEMSRFQVKADILTYNALILGLCKEGKTKKAAYLVRELDEKGLVPNASTFSA 418
Query: 306 LVPFVCEKGDLDFAFNLCK 324
L+ C + + AF + K
Sbjct: 419 LIYGQCVQKQSERAFQIYK 437
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 87/190 (45%), Gaps = 1/190 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LIA Y + +A K+ M V++FN L+ K E LF ++ +
Sbjct: 279 LIAGYCNKGLLSSAMKLRSVMEKNGVPPDVVTFNTLVNGFCKVGKLQEASKLFGEM-KGM 337
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
+ P V+YN +I + G+ + N L EM + ++ D++T+N L+LG G+ A
Sbjct: 338 SLSPTTVTYNILINGYSKAGNCEMGNRLFEEMSRFQVKADILTYNALILGLCKEGKTKKA 397
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ + + PN +++A + G ++KQ+++A ++ M P TF L+
Sbjct: 398 AYLVRELDEKGLVPNASTFSALIYGQCVQKQSERAFQIYKSMIKSSFTPCDQTFRMLLST 457
Query: 278 FVNEGNLEEA 287
F + + A
Sbjct: 458 FCENEDYDGA 467
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 93/190 (48%), Gaps = 1/190 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+ + K + A K+F EM G + T +++N L+ + + + LF+++ +
Sbjct: 314 LVNGFCKVGKLQEASKLFGEMKGMSLSPTTVTYNILINGYSKAGNCEMGNRLFEEM-SRF 372
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
++ D+++YN +I +G A L+ E+++KG+ + TF+ L+ G + A
Sbjct: 373 QVKADILTYNALILGLCKEGKTKKAAYLVRELDEKGLVPNASTFSALIYGQCVQKQSERA 432
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+I+++M+ + P +++ L + A++L+ EM ++ PDV Y L G
Sbjct: 433 FQIYKSMIKSSFTPCDQTFRMLLSTFCENEDYDGAVQLLEEMLNRHKAPDVNNLYELCAG 492
Query: 278 FVNEGNLEEA 287
G ++ A
Sbjct: 493 LGQCGKVKTA 502
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 84/201 (41%), Gaps = 11/201 (5%)
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRL---DLITFNTLLLGFYSNGRFADAEKIW 221
S +I+++ ++ S+D + L +E RL F+ L F +F +A +
Sbjct: 133 SAESILRSIIESCSIDFPSKL-FESLLYSYRLCDSSPHVFDLLFKTFAHLKKFRNASDTF 191
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
M + P V S NA L L + AL EMR I P+ +T +I
Sbjct: 192 CRMKDYGFLPTVESCNAYLSSLLNFSRGDIALAFYREMRRSRIYPNSYTLNLVICACCKL 251
Query: 282 GNLEEAKRWYNKSGC---GMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV--DQA 336
G L++A + + G N A + L+ C KG L A L R+ E+ V D
Sbjct: 252 GRLDKANVVFEEMGTMGFSPNVASYNTLIAGYCNKGLLSSAMKL--RSVMEKNGVPPDVV 309
Query: 337 PLQLVVDRLAKELRVEEAKEL 357
+V+ K +++EA +L
Sbjct: 310 TFNTLVNGFCKVGKLQEASKL 330
>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
Length = 716
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 96/190 (50%), Gaps = 1/190 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI Y M + A +F+EM + V+++ ++ A K D+ F + +
Sbjct: 404 LIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQ- 462
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ PD +Y+ +I+ F GSL A L+ E+ G+RLD++ F++++ GR DA
Sbjct: 463 GVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDA 522
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ I++ VN+ P+ Y+ +DG + + +KAL + M S I P+V + L+ G
Sbjct: 523 QNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNG 582
Query: 278 FVNEGNLEEA 287
+ G ++E
Sbjct: 583 YCKIGRIDEG 592
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 157/365 (43%), Gaps = 29/365 (7%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
+VI +KE ++ + D FK+ G + Y+ V L A+ E L Q
Sbjct: 228 TVIDCFFKEGDVNKACDLFKEMVQRG-IPPDLVTYSSVVHALCKARAMGKAEAFLR-QMV 285
Query: 86 YKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
K + + +T LI Y ++ A +VF EM + V++ N L+G+ K
Sbjct: 286 NKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIK 345
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
E +F + K G PD+ SY ++ + KG L L M GI D+ TF+ L
Sbjct: 346 EARDVFDTMAMK-GQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVL 404
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+ + + G A I+ M + V+P+V +Y + L + A+E +M + +
Sbjct: 405 IKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGV 464
Query: 265 NPDVFTFYALIKGFVNEGNLEEAKRW---YNKSGCGMNKAIFKLLVPFVCEKGDLDFAFN 321
PD + ++ LI+GF G+L +AK +G ++ F ++ +C+ G + A N
Sbjct: 465 APDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQN 524
Query: 322 LCKRTFSERCLVDQAPLQLV----------VDRLAKELRVEEA-------KELVELGK-T 363
+ T + V Q P +V V ++ K LRV +A +V G
Sbjct: 525 IFDLTVN----VGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLV 580
Query: 364 NSYCR 368
N YC+
Sbjct: 581 NGYCK 585
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 138/311 (44%), Gaps = 9/311 (2%)
Query: 53 FRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ----YKDISKEGFTARLIALYGKAAMF 108
R + I ++ AKR +IL H+ D+ + + GK+
Sbjct: 146 LRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQA 205
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
++ ++ E G C V+++ ++ ++ LFK++ + GI PDLV+Y++
Sbjct: 206 DDLLRMMAE-GGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQR-GIPPDLVTYSS 263
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
++ A ++ A L +M KG+ D T+N L+ G+ S G++ +A ++++ M +
Sbjct: 264 VVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHS 323
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
+ P+V + N + L + K+A ++ M K NPDVF++ ++ G+ +G L +
Sbjct: 324 ILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMT 383
Query: 289 RWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRL 345
++ G + F +L+ G LD A + D V+ L
Sbjct: 384 DLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAAL 443
Query: 346 AKELRVEEAKE 356
+ ++++A E
Sbjct: 444 CRIGKMDDAME 454
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 81/169 (47%), Gaps = 1/169 (0%)
Query: 102 YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEP 161
Y E A +VFD M E V+ + L+ + DE LF+++ K GI+P
Sbjct: 548 YCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQK-GIKP 606
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
+ YN II G A +EM + GI ++ T+N +L GF+ N F +A ++
Sbjct: 607 STILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLF 666
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
+ + MNV+ ++ + N + G+ ++ ++A +L + + P V T
Sbjct: 667 KELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVT 715
>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 997
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 140/329 (42%), Gaps = 21/329 (6%)
Query: 56 NTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVF 115
N YT + AK+ + E+ E + + LI + KA E A ++F
Sbjct: 552 NVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIF 611
Query: 116 DEMPGR---------------NCEQ-TVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGI 159
+ M G N E+ V+++ ALL S + +E L + + G
Sbjct: 612 ERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSME-GC 670
Query: 160 EPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEK 219
EP+ + Y+ +I G LD A + EM + G L T+++L+ ++ R A K
Sbjct: 671 EPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASK 730
Query: 220 IWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFV 279
+ M+ + PNV Y +DGL +T +A +L+ M K P+V T+ A+I GF
Sbjct: 731 VLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFG 790
Query: 280 NEGNLE---EAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQA 336
G +E E G N +++L+ C+ G LD A NL + A
Sbjct: 791 MIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTA 850
Query: 337 PLQLVVDRLAKELRVEEAKELVELGKTNS 365
+ V++ KE +E L E+G+ ++
Sbjct: 851 GYRKVIEGFNKEF-IESLGLLDEIGQDDT 878
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 142/326 (43%), Gaps = 20/326 (6%)
Query: 53 FRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENAR 112
F +T Y+ + L NA + + E K+ ++ ++ + KA + E AR
Sbjct: 479 FIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQAR 538
Query: 113 KVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKA 172
K F+EM C V+++ AL+ A + +KK + LF+ + + G P++V+Y+ +I
Sbjct: 539 KWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSE-GCLPNIVTYSALIDG 597
Query: 173 FVDKGSLDSANTLLYEM----------------EKKGIRLDLITFNTLLLGFYSNGRFAD 216
G ++ A + M + R +++T+ LL GF + R +
Sbjct: 598 HCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEE 657
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
A K+ + M PN Y+A +DGL + +A E+ EM ++T+ +LI
Sbjct: 658 ARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLID 717
Query: 277 GFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV 333
+ + A + +K + C N I+ ++ +C+ G D A+ L + + C
Sbjct: 718 RYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQP 777
Query: 334 DQAPLQLVVDRLAKELRVEEAKELVE 359
+ ++D ++E EL+E
Sbjct: 778 NVVTYTAMIDGFGMIGKIETCLELLE 803
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 78/168 (46%), Gaps = 6/168 (3%)
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
P +YN +I+AF+ LDSA+ + EM +R+D T G++ +A +
Sbjct: 233 PSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTL 292
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
ET N P+ Y + GL ++A++ + MR+ P+V T+ L+ G +N
Sbjct: 293 VET---ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLN 349
Query: 281 EGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKR 325
+ L KR N GC + IF LV C GD +A+ L K+
Sbjct: 350 KKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKK 397
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 110/253 (43%), Gaps = 17/253 (6%)
Query: 107 MFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSY 166
+ + A K + EM ++ ++ ++ K+++ + +++ + G PD +Y
Sbjct: 428 LLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQ-GFIPDTSTY 486
Query: 167 NTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVN 226
+ ++ + ++ A L EM++ G+ D+ T+ ++ F G A K + M
Sbjct: 487 SKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 546
Query: 227 MNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEE 286
+ PNV +Y A + K+ A EL M S+ P++ T+ ALI G G +E+
Sbjct: 547 VGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEK 606
Query: 287 AKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLA 346
A + + + CG VP D+D F +V L +D
Sbjct: 607 ACQIFERM-CGSKD------VP------DVDMYFKQYDDNSERPNVVTYGAL---LDGFC 650
Query: 347 KELRVEEAKELVE 359
K RVEEA++L++
Sbjct: 651 KSHRVEEARKLLD 663
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/299 (19%), Positives = 113/299 (37%), Gaps = 41/299 (13%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I G+ K L + + S+ G F Y+ + R KR ++L +
Sbjct: 679 ALIDGLCKVGKLDEAQEVKTEMSEHG-FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLE 737
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
+I K + A K+ M + C+ V+++ A++ K +
Sbjct: 738 NSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIET 797
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
L + + K G+ P+ V+Y +I G+LD A+ LL EM++ + ++
Sbjct: 798 CLELLERMGSK-GVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVI 856
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVR------------------------------- 234
GF N F ++ + + + + P +
Sbjct: 857 EGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSAT 914
Query: 235 ------SYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+YN+ ++ L + + + A +L EM K + P++ +F +LIKG + EA
Sbjct: 915 LVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEA 973
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 70/417 (16%), Positives = 144/417 (34%), Gaps = 84/417 (20%)
Query: 22 KFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILE 81
+F+ ++R + + +++ + D RFR + Y +Q A R ++
Sbjct: 201 EFLNVLVRKHCRNGSFSIALEELGRLKDF-RFRPSRSTYNCLIQAFLKADRLDS-ASLIH 258
Query: 82 HQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSK 141
+ ++ +GFT R A R+ + N + + L+ +
Sbjct: 259 REMSLANLRMDGFTLRCFAY--SLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEAS 316
Query: 142 KFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITF 201
F+E + P++V+Y+T++ ++K L +L M +G F
Sbjct: 317 LFEEAMDFLNRM-RATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIF 375
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQT------------ 249
N+L+ + ++G + A K+ + MV P YN + + +K +
Sbjct: 376 NSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKA 435
Query: 250 -----------------------------KKALELVGEMRSKEINPDVFTFYALIKGFVN 280
+KA ++ EM + PD T+ ++ N
Sbjct: 436 YSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCN 495
Query: 281 -----------------------------------EGNLEEAKRWYNKS---GCGMNKAI 302
G +E+A++W+N+ GC N
Sbjct: 496 ASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVT 555
Query: 303 FKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ L+ + + +A L + SE CL + ++D K +VE+A ++ E
Sbjct: 556 YTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFE 612
>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
Length = 628
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 164/363 (45%), Gaps = 36/363 (9%)
Query: 24 IGSVIRGIYKENNLKRLVDKFKKSSDLGR---FRTNTGIYTGTVQRLANAKRFRWIEEIL 80
+G V+R + K + + RL D LGR ++ + Y + LA A + E
Sbjct: 8 VGEVLRHLGKISTIVRLFDW------LGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKF 61
Query: 81 EHQKQYKDISKEGFTARLIALYG--KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACV 138
+ Q Q + + FT ++ L G KA + A+++ ++ + V++++ ++ C
Sbjct: 62 Q-QMQRRGYPPDDFTYSIV-LRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCC 119
Query: 139 NSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL 198
+ + D+ +FK + G PD+V++N+++K + A L M K G ++
Sbjct: 120 KASRVDDALEIFKTMSSGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNV 179
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
I+++TLL G GR +A ++WE MV + P++ +Y + + GL + +A + +
Sbjct: 180 ISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRK 239
Query: 259 MRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGC--GM------------------ 298
M +K D F +I +G+ EEA+ + C GM
Sbjct: 240 MVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPP 299
Query: 299 NKAIFKLLVPFVCEKGDLDFAFNLCKRTFSER---CLVDQAPLQLVVDRLAKELRVEEAK 355
+ +F L+ VC+ L L +R S + C + ++VD L K +++EA+
Sbjct: 300 SAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQ 359
Query: 356 ELV 358
ELV
Sbjct: 360 ELV 362
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 117/256 (45%), Gaps = 1/256 (0%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
KA + A+++ +EM V++++AL+ K D L +++ K G+ PD
Sbjct: 351 KAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMS-KEGVFPDS 409
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
+ +I+ A G +D A + L M+ +G DL+T+NTLL G GR +A
Sbjct: 410 FTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAK 469
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
MV P+V SY + L Q A + EM + + PD +++L+ G G
Sbjct: 470 MVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGL 529
Query: 284 LEEAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVD 343
+ A S C + + K+++ +C+ G + A + +R D VV
Sbjct: 530 EDLALELLKTSLCKPDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPADAFTYISVVS 589
Query: 344 RLAKELRVEEAKELVE 359
L K +V++A++LV+
Sbjct: 590 GLRKLGKVDKARQLVD 605
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 126/303 (41%), Gaps = 43/303 (14%)
Query: 97 RLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPH- 155
++I ++ M + A K F+EM RN + FN L+ A SK+ + LF+ +
Sbjct: 271 QMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSM 330
Query: 156 -KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR- 213
+ P+L +YN ++ LD A L+ EM G+ D++T++ L+ G G+
Sbjct: 331 KEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKL 390
Query: 214 -------------------FADAEKI---------------WETMVNMNVRPNVRSYNAR 239
F DA + ETM P++ +YN
Sbjct: 391 DRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTL 450
Query: 240 LDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGC 296
LDGL + +A+ + +M + + PDVF++ +I G A + K G
Sbjct: 451 LDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGV 510
Query: 297 GMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKE 356
+ ++ L+ + G D A L K + C D ++V+D L K + E+A E
Sbjct: 511 LPDTVLYHSLLDGLARNGLEDLALELLKTSL---CKPDFVMHKMVLDGLCKAGKAEDACE 567
Query: 357 LVE 359
+VE
Sbjct: 568 VVE 570
>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 128/267 (47%), Gaps = 16/267 (5%)
Query: 59 IYTGTVQ---RLAN-AKRFRWIEEILEHQKQYKDISKE--GFTARLIALYGKAAMFENAR 112
IYT + +L N + +R +E+ Q + IS + +TA + L + E A
Sbjct: 260 IYTTLIDGFCKLGNVSSAYRLFDEM-----QKRKISPDFITYTAVICGLCQTGRVME-AD 313
Query: 113 KVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKA 172
K+F EM + E +++ AL+ K E L + ++G+ P++V+Y +
Sbjct: 314 KLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQML-QMGLTPNIVTYTALADG 372
Query: 173 FVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPN 232
G +D+AN LL+EM +KG+ L++ T+N+L+ G G A K+ + M P+
Sbjct: 373 LCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPD 432
Query: 233 VRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK---R 289
+Y +D ++ +A EL+ +M +E+ P V TF L+ GF G LE+ + +
Sbjct: 433 AVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLK 492
Query: 290 WYNKSGCGMNKAIFKLLVPFVCEKGDL 316
W + G N + L+ C + ++
Sbjct: 493 WMLEKGIMPNATTYNSLIKQYCIRNNM 519
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 124/263 (47%), Gaps = 9/263 (3%)
Query: 99 IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLG 158
IAL G+ + K+ +EM + + ++N ++ + K E + + +++ + G
Sbjct: 200 IALKGEWVL-----KLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISE-G 253
Query: 159 IEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAE 218
I PD V Y T+I F G++ SA L EM+K+ I D IT+ ++ G GR +A+
Sbjct: 254 IAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEAD 313
Query: 219 KIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGF 278
K++ MV + P+ +Y A +DG E + K+A L +M + P++ T+ AL G
Sbjct: 314 KLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGL 373
Query: 279 VNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQ 335
G ++ A + + G +N + LV +C+ G++D A L K D
Sbjct: 374 CKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDA 433
Query: 336 APLQLVVDRLAKELRVEEAKELV 358
++D K + A EL+
Sbjct: 434 VTYTTLMDAYCKSREMVRAHELL 456
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 112/268 (41%), Gaps = 40/268 (14%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K + A ++ EM + E + ++N+L+ + D+ L KD+ G PD
Sbjct: 375 KCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDM-EVAGFHPDA 433
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
V+Y T++ A+ + A+ LL +M + ++ ++TFN L+ GF +G D EK+ +
Sbjct: 434 VTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKW 493
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPD---------------- 267
M+ + PN +YN+ + I + E+ M +K + PD
Sbjct: 494 MLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARN 553
Query: 268 -------------------VFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKL 305
V ++ ALIKGF EA+ + + G ++ I+ +
Sbjct: 554 MKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNI 613
Query: 306 LVPFVCEKGDLDFAFNLCKRTFSERCLV 333
++G ++ LC E+CLV
Sbjct: 614 FADINYDEGKMELTLELCDEAI-EKCLV 640
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 105/246 (42%), Gaps = 4/246 (1%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
S++ G+ K N+ + V K K ++ F + YT + ++ E+L Q
Sbjct: 403 SLVNGLCKAGNIDQAV-KLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLR-QML 460
Query: 86 YKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
+++ T L+ + + M E+ K+ M + ++N+L+
Sbjct: 461 DRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMR 520
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
+++ + K G+ PD +YN +IK ++ A L +M KG L + ++N L
Sbjct: 521 ATTEIYRGMCAK-GVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNAL 579
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+ GFY +F +A +++E M + + YN D E + + LEL E K +
Sbjct: 580 IKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCL 639
Query: 265 NPDVFT 270
D+ T
Sbjct: 640 VGDIQT 645
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 69/151 (45%), Gaps = 10/151 (6%)
Query: 217 AEKIWETMVNMNVRPNVRSYN-------ARLDGLAIEKQTKKALELVGEMRSKEINPDVF 269
A K+++ M+N + +V S N LDG+ I + + L+L+ EM+ K + P+ +
Sbjct: 165 ARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQIKGLKPNPY 224
Query: 270 TFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRT 326
T+ +I G + EA+R + G + I+ L+ C+ G++ A+ L
Sbjct: 225 TYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEM 284
Query: 327 FSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
+ D V+ L + RV EA +L
Sbjct: 285 QKRKISPDFITYTAVICGLCQTGRVMEADKL 315
>gi|15218241|ref|NP_172439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097039|sp|O04491.1|PPR26_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g09680
gi|2160161|gb|AAB60724.1| F21M12.7 gene product [Arabidopsis thaliana]
gi|332190358|gb|AEE28479.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 607
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 132/290 (45%), Gaps = 10/290 (3%)
Query: 79 ILEHQKQYKDISKEGFTARLIAL------YGKAAMFENARKVFDEMPGRNCEQTVLSFNA 132
I + QK + +I+K +++ Y K + ++ +M V +++A
Sbjct: 256 ISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSA 315
Query: 133 LLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKK 192
L+ A K D GLF ++ K G+ P+ V + T+I G +D +M K
Sbjct: 316 LINALCKENKMDGAHGLFDEMC-KRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSK 374
Query: 193 GIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKA 252
G++ D++ +NTL+ GF NG A I + M+ +RP+ +Y +DG + A
Sbjct: 375 GLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETA 434
Query: 253 LELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPF 309
LE+ EM I D F AL+ G EG + +A+R ++G + + +++
Sbjct: 435 LEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDA 494
Query: 310 VCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
C+KGD F L K S+ + ++++ L K +++ A L++
Sbjct: 495 FCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLD 544
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 120/269 (44%), Gaps = 16/269 (5%)
Query: 26 SVIRGIYKENNLK---RLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEH 82
++I G K NL RL + +KS R R + Y+ + L + + +
Sbjct: 280 TLINGYCKVGNLDEGFRLKHQMEKS----RTRPDVFTYSALINALCKENKMDGAHGLFDE 335
Query: 83 QKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSK 141
+ I + LI + + + ++ + +M + + ++ +N L+ G C N
Sbjct: 336 MCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGD 395
Query: 142 KF---DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL 198
+ VDG+ + G+ PD ++Y T+I F G +++A + EM++ GI LD
Sbjct: 396 LVAARNIVDGMIRR-----GLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDR 450
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
+ F+ L+ G GR DAE+ M+ ++P+ +Y +D + + +L+ E
Sbjct: 451 VGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKE 510
Query: 259 MRSKEINPDVFTFYALIKGFVNEGNLEEA 287
M+S P V T+ L+ G G ++ A
Sbjct: 511 MQSDGHVPSVVTYNVLLNGLCKLGQMKNA 539
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 91/203 (44%), Gaps = 3/203 (1%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G ++ +N ++ F +G++ A + E+ K+ ++ +++FNTL+ G+ G +
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEG 294
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ M RP+V +Y+A ++ L E + A L EM + + P+ F LI G
Sbjct: 295 FRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHG 354
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
G ++ K Y K G + ++ LV C+ GDL A N+ D
Sbjct: 355 HSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPD 414
Query: 335 QAPLQLVVDRLAKELRVEEAKEL 357
+ ++D + VE A E+
Sbjct: 415 KITYTTLIDGFCRGGDVETALEI 437
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 74/146 (50%), Gaps = 3/146 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHK 156
LI + + E A ++ EM E + F+AL+ G C + D L + L +
Sbjct: 421 LIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREML--R 478
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
GI+PD V+Y ++ AF KG + LL EM+ G ++T+N LL G G+ +
Sbjct: 479 AGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKN 538
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDG 242
A+ + + M+N+ V P+ +YN L+G
Sbjct: 539 ADMLLDAMLNIGVVPDDITYNTLLEG 564
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 77/175 (44%), Gaps = 3/175 (1%)
Query: 188 EMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEK 247
E+ G L++ FN L+ F G +DA+K+++ + +++P V S+N ++G
Sbjct: 230 EILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVG 289
Query: 248 QTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFK 304
+ L +M PDVFT+ ALI E ++ A ++ K G N IF
Sbjct: 290 NLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFT 349
Query: 305 LLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
L+ G++D ++ S+ D +V+ K + A+ +V+
Sbjct: 350 TLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVD 404
>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
Length = 628
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 84/360 (23%), Positives = 162/360 (45%), Gaps = 30/360 (8%)
Query: 24 IGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQ 83
+G V+R + K + + RL D + ++ + Y + LA A + E + Q
Sbjct: 8 VGEVLRHLGKISTIVRLFDWLGRQKG---YQHSVFTYNCFLDALAKANAGQLAYEKFQ-Q 63
Query: 84 KQYKDISKEGFTARLIALYG--KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSK 141
Q + + FT ++ L G KA + A+++ ++ + V++++ ++ C +
Sbjct: 64 MQRRGYPPDDFTYSIV-LRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKAS 122
Query: 142 KFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITF 201
+ D+ +FK + G PD+V++N+++K + A L M K G ++I++
Sbjct: 123 RVDDALEIFKTMSAGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISY 182
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS 261
+TLL G GR +A ++WE MV + P++ +Y + + GL + +A + +M +
Sbjct: 183 STLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVT 242
Query: 262 KEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGC--GM------------------NKA 301
K D F +I +G+ EEA+ + C GM +
Sbjct: 243 KGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAE 302
Query: 302 IFKLLVPFVCEKGDLDFAFNLCKRTFSER---CLVDQAPLQLVVDRLAKELRVEEAKELV 358
+F L+ VC+ L L +R S + C + ++VD L K +++EA+ELV
Sbjct: 303 LFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELV 362
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 117/256 (45%), Gaps = 1/256 (0%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
KA + A+++ +EM V++++AL+ K D L +++ K G+ PD
Sbjct: 351 KAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMS-KEGVFPDS 409
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
+ +I+ A G +D A + L M+ +G DL+T+NTLL G GR +A
Sbjct: 410 FTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAK 469
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
MV P+V SY + L Q A + EM + + PD +++L+ G G
Sbjct: 470 MVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGL 529
Query: 284 LEEAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVD 343
+ A S C + + K++V +C+ G + A + +R D VV
Sbjct: 530 EDLALELLKTSLCKPDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPADAFTYINVVR 589
Query: 344 RLAKELRVEEAKELVE 359
L K +V++A++LV+
Sbjct: 590 GLRKLGKVDKARQLVD 605
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 126/303 (41%), Gaps = 43/303 (14%)
Query: 97 RLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPH- 155
++I ++ M + A K F+EM RN + FN L+ A SK+ + LF+ +
Sbjct: 271 QMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSM 330
Query: 156 -KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR- 213
+ P+L +YN ++ LD A L+ EM G+ D++T++ L+ G G+
Sbjct: 331 KEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKL 390
Query: 214 -------------------FADAEKI---------------WETMVNMNVRPNVRSYNAR 239
F DA + ETM P++ +YN
Sbjct: 391 DRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTL 450
Query: 240 LDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGC 296
LDGL + +A+ + +M + + PDVF++ +I G A + K G
Sbjct: 451 LDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGV 510
Query: 297 GMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKE 356
+ ++ L+ + G D A L K + C D ++VVD L K + E+A E
Sbjct: 511 LPDTVLYHSLLDGLARNGLEDLALELLKTSL---CKPDFVMHKMVVDGLCKAGKAEDACE 567
Query: 357 LVE 359
+VE
Sbjct: 568 VVE 570
>gi|296089633|emb|CBI39452.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 122/269 (45%), Gaps = 6/269 (2%)
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
F LI YG A +F+ + KVF M +V++FN+LL + + LF ++
Sbjct: 167 FFNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEM 226
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
G+ PD ++N +I+ F +D EM + D++T+NTL+ G G+
Sbjct: 227 LDTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGK 286
Query: 214 FADAEKIWETMV--NMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTF 271
A + + MV + N+ PNV +Y + G +++ +AL L+ EM S+ + P+ T+
Sbjct: 287 VKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITY 346
Query: 272 YALIKGFVNEGNLEEAKR----WYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTF 327
LI+G L++ K G + L+ C G L+ AF++ ++
Sbjct: 347 NTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMS 406
Query: 328 SERCLVDQAPLQLVVDRLAKELRVEEAKE 356
R D A ++V L + A+E
Sbjct: 407 ELRVQPDSATYSVLVRSLCQRGDFRRAEE 435
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/375 (20%), Positives = 147/375 (39%), Gaps = 31/375 (8%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++IRG + ++ + + G + N Y +Q L A++ I+EILE
Sbjct: 313 TLIRGYCMKQDMAEALSLLAEMVSRG-LKPNKITYNTLIQGLCEAQKLDKIKEILEGM-- 369
Query: 86 YKDISKEGFTA------RLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
+ GF LI + E A VF++M + +++ L+ +
Sbjct: 370 ---VGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQ 426
Query: 140 SKKFDEVDGLFKDLP------HKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKG 193
F + F +L H +G +P + +YN + + G A + ++ K+G
Sbjct: 427 RGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRG 486
Query: 194 IRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKAL 253
+ D ++ TL+LG G + M+ + P+ +Y +DGL + A
Sbjct: 487 TQ-DPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAH 545
Query: 254 ELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN-------KSGCGMNKAIFKLL 306
+ + +M P F++++ V +G E+ + ++ + L
Sbjct: 546 KSLEKMLKSSHLPTTAIFHSILAALVEKGCAHESASLVKLMLERRIRQNIDLSTHTMEEL 605
Query: 307 VPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA----KELVELGK 362
V F+C+ L A + + +R VD V+ L K +V EA ELVE G
Sbjct: 606 VSFLCQSRKLLEAQKMLLFSLEKRQSVDIDMCSTVISGLCKAHKVSEAFALYYELVEKGM 665
Query: 363 TNSY-CRYNLKFPSE 376
+ C+ +L+ E
Sbjct: 666 QHRLTCQEDLRISLE 680
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 108/248 (43%), Gaps = 12/248 (4%)
Query: 49 DLGRFRTNTGI--YTGTVQRLANAKRFRWIEEILEHQ-KQYKDISKEGFT-ARLIALYGK 104
++ RF+ + + Y V L A + + +++ K+ ++S T LI Y
Sbjct: 261 EMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCM 320
Query: 105 AAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLV 164
A + EM R + +++N L+ ++K D++ + + + G PD
Sbjct: 321 KQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTC 380
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
+ NT+IKA G L+ A ++ +M + ++ D T++ L+ G F AE+ ++ +
Sbjct: 381 TLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDEL 440
Query: 225 V-------NMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ +P V +YN + L +TKKA E V K D ++ LI G
Sbjct: 441 AEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKA-ERVFRQLMKRGTQDPPSYKTLILG 499
Query: 278 FVNEGNLE 285
EG E
Sbjct: 500 HCREGTPE 507
>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
Length = 924
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 151/339 (44%), Gaps = 30/339 (8%)
Query: 16 ATATGPKFIGSVIRGIYKENNLKR------LVDKFKKSSDLGRFRTNTGIYTGTVQRLAN 69
A T P + SV R + + +R LVD +KK+ GR R + ++ L
Sbjct: 149 AYPTPPLVLSSVHRALSGSDQGRRPVVLDVLVDTYKKT---GRVRDGAEVVL-LMKDLGL 204
Query: 70 AKRFRWIEEILEHQK---------------QYKDISKEGFT-ARLIALYGKAAMFENARK 113
A R +L+ + IS + +T + LI Y K E+A+K
Sbjct: 205 APSLRCCNGLLKDLLRADALDLLWKVRGFMEGAGISPDVYTYSTLIEAYCKVRDLESAKK 264
Query: 114 VFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAF 173
V +EM C V+++N L+G + +E G K++ G+ PD +Y II
Sbjct: 265 VVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKEM-EDYGLVPDGFTYGAIINGL 323
Query: 174 VDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNV 233
+G D A LL EM G+ +++ ++TL+ GF G +A KI + M V+PN
Sbjct: 324 CKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNK 383
Query: 234 RSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN- 292
+Y+ + GL + +A ++ +M D T+ +I+G + + N EEA N
Sbjct: 384 ITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNE 443
Query: 293 --KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSE 329
K G N + +++ +C+ G+ + A L ++ ++
Sbjct: 444 MRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIAD 482
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 103/200 (51%), Gaps = 3/200 (1%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
GI PD+ +Y+T+I+A+ L+SA ++ EM + G L+++T+NTL+ G G +A
Sbjct: 238 GISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEA 297
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ M + + P+ +Y A ++GL + +A L+ EM + P+V + LI G
Sbjct: 298 FGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDG 357
Query: 278 FVNEGNLEEA---KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
F+ +GN +EA + + +G NK + L+ +C+ G + A + K+ + D
Sbjct: 358 FMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMAD 417
Query: 335 QAPLQLVVDRLAKELRVEEA 354
LV++ ++ EEA
Sbjct: 418 TMTYNLVIEGHLRQHNKEEA 437
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 150/351 (42%), Gaps = 15/351 (4%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
S+I G+ + ++ + + + G F+ N Y G + + A E++L HQ
Sbjct: 528 SLIIGLSNVGKMDEAIEYYDEMLEKG-FQPNDFTYGGLIHGYSMAGNLEKAEQLL-HQML 585
Query: 86 YKDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN---SK 141
++ F A+++ Y K+ E M E+ ++ N L G ++ S
Sbjct: 586 NSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSM----LEKGLMPDNRLYGIVIHNLSSS 641
Query: 142 KFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITF 201
+ + K G+ PD + Y ++I F ++ A LL EM KKGI + +
Sbjct: 642 GHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCY 701
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS 261
N L+ GF + + A I+ +++ + PN +Y +DG + A++L EM +
Sbjct: 702 NALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLT 761
Query: 262 KEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKAI---FKLLVPFVCEKGDLDF 318
+ + PD F + L G N G+L++A + + AI F LV C++G L
Sbjct: 762 EGVAPDAFVYSVLAAGCSNSGDLQQA-LFITEEMIARGYAIISSFNTLVHGFCKRGKLQE 820
Query: 319 AFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL-VELGKTNSYCR 368
+ + ++ +V L + ++ EA + VEL + N+ R
Sbjct: 821 TVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKLSEAHTIFVELQQKNASHR 871
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/357 (20%), Positives = 158/357 (44%), Gaps = 11/357 (3%)
Query: 25 GSVIRGIYK---ENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILE 81
G++I G+ K + K L+D+ + + + + G +++ + F+ ++E+
Sbjct: 317 GAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSA 376
Query: 82 HQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSK 141
Q I+ + L K A ++ +M +++N ++ +
Sbjct: 377 AGVQPNKITYDNLIRGLC----KLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQH 432
Query: 142 KFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITF 201
+E L ++ K GI P++ +Y+ II G + A+ LL +M G++ + +
Sbjct: 433 NKEEAFLLLNEM-RKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVY 491
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS 261
L+ G+ G F+ A + + M N+ P++ YN+ + GL+ + +A+E EM
Sbjct: 492 APLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLE 551
Query: 262 KEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDF 318
K P+ FT+ LI G+ GNLE+A++ ++ SG N I+ ++ + +L+
Sbjct: 552 KGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEK 611
Query: 319 AFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKTNSYCRYNLKFPS 375
+ K + + D +V+ L+ ++ A ++ + + N +L + S
Sbjct: 612 VSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGS 668
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 101/234 (43%), Gaps = 11/234 (4%)
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
EV L KDL G+ P L N ++K + +LD + ME GI D+ T++TL
Sbjct: 194 EVVLLMKDL----GLAPSLRCCNGLLKDLLRADALDLLWKVRGFMEGAGISPDVYTYSTL 249
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+ + A+K+ E M NV +YN + GL ++A EM +
Sbjct: 250 IEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKEMEDYGL 309
Query: 265 NPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCG---MNKAIFKLLVPFVCEKGDLDFAFN 321
PD FT+ A+I G G ++AK ++ C N ++ L+ +G+ D AF
Sbjct: 310 VPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFK 369
Query: 322 LCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA----KELVELGKTNSYCRYNL 371
+ K + ++ ++ L K R+ A K++ ++G YNL
Sbjct: 370 IVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNL 423
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 75/164 (45%), Gaps = 3/164 (1%)
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
+ + L+ + GR D ++ M ++ + P++R N L L ++ G
Sbjct: 174 VVLDVLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGF 233
Query: 259 MRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGD 315
M I+PDV+T+ LI+ + +LE AK+ ++GC +N + L+ +C G
Sbjct: 234 MEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGA 293
Query: 316 LDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
++ AF K + D +++ L K R ++AK L++
Sbjct: 294 IEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLD 337
>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
Length = 688
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 110/218 (50%), Gaps = 9/218 (4%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGL--FKDLPHKLGIEPDLVSYN 167
A + D M + T +++ ++ G C KK D V L + + I P++V Y+
Sbjct: 203 AVALLDRMMEDGLQPTQITYGTIVDGMC---KKGDTVSALNLLRKMEEVSHIIPNVVIYS 259
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
II + G A L EM++KGI DL T+N++++GF S+GR++DAE++ + M+
Sbjct: 260 AIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER 319
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+ P+V +YNA ++ E + +A EL EM + I P+ T+ ++I GF + L+ A
Sbjct: 320 KISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAA 379
Query: 288 KRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
+ + GC + F L+ C +D L
Sbjct: 380 EDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMEL 417
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 122/256 (47%), Gaps = 22/256 (8%)
Query: 56 NTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFT-ARLIALYGKAAMFENARKV 114
NT Y + R E++ + K S + FT LI Y A ++ ++
Sbjct: 359 NTITYNSMIDGFCKQDRLDAAEDMF-YLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMEL 417
Query: 115 FDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKL---GIEPDLVSYNTII 170
EMP R +++N L+ G C+ +++ DL ++ G+ PD+V+ NT++
Sbjct: 418 LHEMPRRGLVANTVTYNTLIHGFCL----VGDLNAAL-DLSQQMISSGVCPDIVTCNTLL 472
Query: 171 KAFVDKGSLDSANTLLYEMEKK-----------GIRLDLITFNTLLLGFYSNGRFADAEK 219
D G L A + M+K G+ D++T+N L+ G + G+F +AE+
Sbjct: 473 DGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEE 532
Query: 220 IWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFV 279
++E M + + P+ +Y++ +DGL + + +A ++ M SK +P+V TF LI G+
Sbjct: 533 LYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYC 592
Query: 280 NEGNLEEAKRWYNKSG 295
G +++ + + G
Sbjct: 593 KAGRVDDGLELFCEMG 608
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 129/303 (42%), Gaps = 39/303 (12%)
Query: 25 GSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQK 84
G+++ G+ K+ + ++ +K ++ N IY+ + L R
Sbjct: 223 GTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRH----------- 271
Query: 85 QYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
+A+ +F EM + + ++N+++ +S ++
Sbjct: 272 ------------------------SDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWS 307
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
+ + L +++ + I PD+V+YN +I AFV +G A L EM +GI + IT+N++
Sbjct: 308 DAEQLLQEMLER-KISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSM 366
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+ GF R AE ++ M P+V ++ +DG K+ +EL+ EM + +
Sbjct: 367 IDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGL 426
Query: 265 NPDVFTFYALIKGFVNEGNLEEA---KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFN 321
+ T+ LI GF G+L A + SG + L+ +C+ G L A
Sbjct: 427 VANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALE 486
Query: 322 LCK 324
+ K
Sbjct: 487 MFK 489
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 119/273 (43%), Gaps = 13/273 (4%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
S+I G K++ L D F + G + +T + AKR E+L +
Sbjct: 365 SMIDGFCKQDRLDAAEDMFYLMATKG-CSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPR 423
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFD 144
++ LI + A + +M +++ N LL G C N K D
Sbjct: 424 RGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKD 483
Query: 145 EVDGLFK---------DLPHKL-GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGI 194
++ +FK D H G+EPD+++YN +I +++G A L EM +GI
Sbjct: 484 ALE-MFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGI 542
Query: 195 RLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALE 254
D IT+++++ G R +A +++ +M + + PNV ++N ++G + LE
Sbjct: 543 VPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLE 602
Query: 255 LVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
L EM + I D + LI GF GN+ A
Sbjct: 603 LFCEMGRRGIVADAIIYITLIYGFRKVGNINGA 635
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 5/219 (2%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
E+A +F +M +V+ F L+G V ++ D V L++ + K I D+ S+N
Sbjct: 60 LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERK-QIRCDIYSFN 118
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
+IK F L A + ++ K G+ D++TF TLL G R ++A + M
Sbjct: 119 ILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFET 178
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
RPNV ++ ++GL E + +A+ L+ M + P T+ ++ G +G+ A
Sbjct: 179 TCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSA 238
Query: 288 KRWYNK----SGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
K S N I+ ++ +C+ G A NL
Sbjct: 239 LNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNL 277
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 102/218 (46%), Gaps = 6/218 (2%)
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT 203
D +D LF D+ + P +V + ++ V D +L +ME+K IR D+ +FN
Sbjct: 62 DAID-LFSDMLRSRPL-PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNI 119
Query: 204 LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
L+ F S + A + + + + P+V ++ L GL +E + +AL+ +M
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETT 179
Query: 264 INPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAF 320
P+V TF L+ G EG + EA ++ G + + +V +C+KGD A
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239
Query: 321 NLCKRTFSERCLVDQAPL-QLVVDRLAKELRVEEAKEL 357
NL ++ ++ + ++D L K+ R +A+ L
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNL 277
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 79/153 (51%), Gaps = 1/153 (0%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
F A ++++EMP R +++++++ + DE +F + K P++V++N
Sbjct: 527 FLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSK-SFSPNVVTFN 585
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
T+I + G +D L EM ++GI D I + TL+ GF G A I++ M++
Sbjct: 586 TLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISS 645
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMR 260
V P+ + L G +++ ++A+ ++ +++
Sbjct: 646 GVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 678
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 68/157 (43%), Gaps = 5/157 (3%)
Query: 207 GFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKK-ALELVGEMRSKEIN 265
GF+ DA ++ M+ P+V + +L G+ + + + L +M K+I
Sbjct: 53 GFHEIKGLEDAIDLFSDMLRSRPLPSVVDF-CKLMGVVVRMERPDLVISLYQKMERKQIR 111
Query: 266 PDVFTFYALIKGFVNEGNLEEAKRWYNKS---GCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
D+++F LIK F + L A + K G + F L+ +C + + A +
Sbjct: 112 CDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDF 171
Query: 323 CKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ F C + +++ L +E R+ EA L++
Sbjct: 172 FHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLD 208
>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
Length = 479
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 136/283 (48%), Gaps = 14/283 (4%)
Query: 25 GSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQK 84
G+++ G+ K + ++ +K +L + + IY+ + L R + + +
Sbjct: 120 GTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFI-EM 178
Query: 85 QYKDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKF 143
Q K I + T + +I + + + A+++ EM R V++F+ L+ A V
Sbjct: 179 QDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDL 238
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKK----------- 192
+ L +++ G+ P++V+ NT++ D G L A + M+K
Sbjct: 239 NSAQDLLQEMISS-GVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFN 297
Query: 193 GIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKA 252
G+ D+ T+N L+ G + G+F +AE+++E M + + P+ +Y++ ++GL + + +A
Sbjct: 298 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEA 357
Query: 253 LELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSG 295
++ M SK +P++ TF LI G+ G +++ + + G
Sbjct: 358 TQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMG 400
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 125/270 (46%), Gaps = 13/270 (4%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I G++K+ + F + D G F + Y+ + ++ ++ + +L+ +
Sbjct: 157 AIIDGLWKDGRHTDAQNLFIEMQDKGIF-PDIVTYSCMINGFCSSGKWSEAQRLLQ-EML 214
Query: 86 YKDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
+ IS + T + LI K +A+ + EM V++ N LL +S K
Sbjct: 215 VRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLK 274
Query: 145 EVDGLFK---------DLPHKL-GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGI 194
+ +FK D H G+EPD+ +YN +I +++G A L EM +GI
Sbjct: 275 DALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI 334
Query: 195 RLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALE 254
D +T+++++ G R +A +++++M + + PN+ ++N + G LE
Sbjct: 335 VPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLE 394
Query: 255 LVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
L EM + I + T+ LI+GF GN+
Sbjct: 395 LFCEMGRRGIVANAITYITLIRGFRKVGNI 424
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 103/210 (49%), Gaps = 24/210 (11%)
Query: 150 FKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFY 209
++L H I+PD+V Y+ II G A L EM+ KGI D++T++ ++ GF
Sbjct: 142 MEELSH---IKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFC 198
Query: 210 SNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVF 269
S+G++++A+++ + M+ + P+V +++ ++ L E A +L+ EM S + P+V
Sbjct: 199 SSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVV 258
Query: 270 TFYALIKGFVNEGNLEEAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSE 329
T L+ G + G L++A + M K++ + D AFN +
Sbjct: 259 TCNTLLDGLCDSGKLKDALEMFK----AMQKSMMDI---------DATHAFNGVEP---- 301
Query: 330 RCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
D +++ L E + EA+EL E
Sbjct: 302 ----DVQTYNILISGLINEGKFLEAEELYE 327
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 109/248 (43%), Gaps = 15/248 (6%)
Query: 127 VLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLL 186
+ SFN L+ + K F L KLG P LV++NT++ + + A L
Sbjct: 15 IYSFNILIKCFCSCSKLPFALSTFGKLT-KLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73
Query: 187 YEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIE 246
++M K + +TF TL+ G GR +A + + MV ++PN +Y +DG+
Sbjct: 74 HQMCKPNV----VTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129
Query: 247 KQTKKALELVGEMRS-KEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKAIFKL 305
T AL L+ +M I PDV + A+I G +G +A+ + + +K IF
Sbjct: 130 GDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEM---QDKGIFPD 186
Query: 306 LVPF------VCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+V + C G A L + + D +++ L KE + A++L++
Sbjct: 187 IVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQ 246
Query: 360 LGKTNSYC 367
++ C
Sbjct: 247 EMISSGVC 254
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 81/153 (52%), Gaps = 1/153 (0%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
F A ++++EMP R +++++++ + DE +F + K P++V++N
Sbjct: 319 FLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSK-SFSPNIVTFN 377
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
T+I + G +D L EM ++GI + IT+ TL+ GF G + I++ M++
Sbjct: 378 TLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISS 437
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMR 260
V P+ + L GL +++ KKAL ++ E++
Sbjct: 438 GVYPDTITIRNMLTGLWSKEELKKALAMLEELQ 470
>gi|242058297|ref|XP_002458294.1| hypothetical protein SORBIDRAFT_03g030760 [Sorghum bicolor]
gi|241930269|gb|EES03414.1| hypothetical protein SORBIDRAFT_03g030760 [Sorghum bicolor]
Length = 534
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 129/264 (48%), Gaps = 15/264 (5%)
Query: 105 AAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLV 164
AA ++A ++F +P + V S+N ++ + +F ++ K I P +V
Sbjct: 178 AADIKDALRLFRNIP----KPDVCSYNTIIDGLCRRGRLAAALEMFSEMVGKC-IAPTVV 232
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
+Y T+I +G D A + EM ++G+ +L+T+++L+ G GR A A ++ + M
Sbjct: 233 TYTTLIHWLAREGCFDDALKIFDEMGRRGVSPNLVTYSSLIDGLCKGGRAASALELMDRM 292
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
+ PN +Y++ +DGL E +A+E++ MR + PD F LI G + G
Sbjct: 293 IKEKKLPNTITYSSVIDGLCKEHMLSEAMEVLDRMRLQGRKPDAGLFGKLIVGLCDAGRA 352
Query: 285 EEAKRWYNK---SGCGMNKAIFKL-------LVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
EA + ++ +G N+ + L ++ +C KG+L AF + + T + D
Sbjct: 353 VEAANYLDEMILAGIEPNRVTWSLHTRINNTVLTALCAKGELGRAFQVYQSTRTRSISTD 412
Query: 335 QAPLQLVVDRLAKELRVEEAKELV 358
L+V+ +K+ +E+A +V
Sbjct: 413 PTTFHLLVESFSKKKNMEKAAHVV 436
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 97/214 (45%), Gaps = 5/214 (2%)
Query: 149 LFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
LF+ P L + SYN ++ A V L A +LL +M G T+N LL
Sbjct: 114 LFRSAPSDLALPHSARSYNAVLAALVAHSHLPLARSLLADMRAAGFAPTAATYNVLLKAQ 173
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDV 268
S+ AD + N+ +P+V SYN +DGL + ALE+ EM K I P V
Sbjct: 174 CSDA-AADIKDALRLFRNIP-KPDVCSYNTIIDGLCRRGRLAAALEMFSEMVGKCIAPTV 231
Query: 269 FTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKR 325
T+ LI EG ++A + ++ + G N + L+ +C+ G A L R
Sbjct: 232 VTYTTLIHWLAREGCFDDALKIFDEMGRRGVSPNLVTYSSLIDGLCKGGRAASALELMDR 291
Query: 326 TFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
E+ L + V+D L KE + EA E+++
Sbjct: 292 MIKEKKLPNTITYSSVIDGLCKEHMLSEAMEVLD 325
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 96/201 (47%), Gaps = 16/201 (7%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSK---KFDEVDGLFKDL 153
LI + F++A K+FDEM R ++++++L+ G C + + +D + K+
Sbjct: 237 LIHWLAREGCFDDALKIFDEMGRRGVSPNLVTYSSLIDGLCKGGRAASALELMDRMIKE- 295
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
KL P+ ++Y+++I + L A +L M +G + D F L++G GR
Sbjct: 296 -KKL---PNTITYSSVIDGLCKEHMLSEAMEVLDRMRLQGRKPDAGLFGKLIVGLCDAGR 351
Query: 214 FADAEKIWETMVNMNVRPN-------VRSYNARLDGLAIEKQTKKALELVGEMRSKEINP 266
+A + M+ + PN R N L L + + +A ++ R++ I+
Sbjct: 352 AVEAANYLDEMILAGIEPNRVTWSLHTRINNTVLTALCAKGELGRAFQVYQSTRTRSIST 411
Query: 267 DVFTFYALIKGFVNEGNLEEA 287
D TF+ L++ F + N+E+A
Sbjct: 412 DPTTFHLLVESFSKKKNMEKA 432
>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
Length = 896
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 118/261 (45%), Gaps = 5/261 (1%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMP 119
YT + L A R EE+ + + + +I YG A FENA K+ D++
Sbjct: 290 YTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLK 349
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL 179
R C +V+SFN++L +K DE LF+ + K EP+ +YN II G +
Sbjct: 350 ERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAM--KKDAEPNSSTYNIIIDMLCMAGKV 407
Query: 180 DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNAR 239
+ A + EME G+ +L+T N ++ +F A +++ET PN +Y +
Sbjct: 408 EEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSL 467
Query: 240 LDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY---NKSGC 296
+DGL + A L M N + + +LI+ F G E+ + + N+ GC
Sbjct: 468 IDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGC 527
Query: 297 GMNKAIFKLLVPFVCEKGDLD 317
+ + + V + GD++
Sbjct: 528 QPDLTLLNTYMDCVFKAGDVE 548
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 135/296 (45%), Gaps = 11/296 (3%)
Query: 86 YKDISKEGFTARL----IALYG--KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
++DI GF + I ++G KA +F M + ++NA++
Sbjct: 554 FEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCK 613
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
S K D+ + +++ K + P + +Y +II LD A L E + KGI L++I
Sbjct: 614 SGKLDKAYEVLEEMKVK-RVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVI 672
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
+++L+ GF GR +A I E M+ + PNV ++N+ +D L ++ +AL M
Sbjct: 673 VYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSM 732
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDL 316
+ + +P+ +T+ LI G +A ++ K G N + ++ + + G++
Sbjct: 733 KEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNI 792
Query: 317 DFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKTNSYCRYNLK 372
A +L +R + D A +++ ++ R EA + E + CR N+K
Sbjct: 793 TDACSLFERFKANGGTPDAASFNALIEGMSHANRAIEAYHVFEETRLKG-CRINVK 847
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 89/179 (49%), Gaps = 1/179 (0%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
E+ K+F EM R C+ + N + + ++ +F+D+ G PD+ SY+
Sbjct: 513 EDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDI-KGYGFLPDVRSYSI 571
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
+I G +++ + M+++G LD +N ++ GF +G+ A ++ E M
Sbjct: 572 LIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKR 631
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
V P V +Y + +DGLA + +A L E +SK I +V + +LI GF G ++EA
Sbjct: 632 VPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEA 690
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 120/269 (44%), Gaps = 4/269 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I + A E A + DEM +L+ N ++ +KKF+ +F+ +
Sbjct: 397 IIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQR- 455
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G P+ V+Y ++I KG++D A L M G + + + +L+ F+ +GR D
Sbjct: 456 GCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDG 515
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
KI++ M +P++ N +D + +K + +++ PDV ++ LI G
Sbjct: 516 HKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHG 575
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
G E ++ + G ++ + +V C+ G LD A+ + + +R
Sbjct: 576 LTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPT 635
Query: 335 QAPLQLVVDRLAKELRVEEAKELVELGKT 363
A ++D LAK R++EA L E K+
Sbjct: 636 VATYGSIIDGLAKIDRLDEAYMLFEEAKS 664
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 134/300 (44%), Gaps = 7/300 (2%)
Query: 64 VQRLANAKRFRWIEEILEHQKQYKDISKEGFTAR--LIALYGKAAMFENARKVFDEMPGR 121
V L +R E ++ ++ K + F+A LI +A E A ++ +M
Sbjct: 154 VSALVRTRRLDDAERVIAAMRRLK--FRPAFSAYTVLIGAMAEARQPERALELLRQMQEV 211
Query: 122 NCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDS 181
E V F L+ A + + L ++ +EPD+V YN I F G++D
Sbjct: 212 GYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSC-LEPDIVLYNVCIDCFGKAGNVDM 270
Query: 182 ANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLD 241
A +E++ +G++ D +++ +++ GR ++AE+++ M P +YN +
Sbjct: 271 AWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIM 330
Query: 242 GLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN--KSGCGMN 299
G Q + A +L+ +++ + P V +F +++ + ++EA + K N
Sbjct: 331 GYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKDAEPN 390
Query: 300 KAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ + +++ +C G ++ A+ + + + ++VDRL K + E A E+ E
Sbjct: 391 SSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFE 450
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/262 (20%), Positives = 110/262 (41%), Gaps = 2/262 (0%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
+V+ G K L + + ++ + R Y + LA R + E K
Sbjct: 606 AVVDGFCKSGKLDKAYEVLEEMK-VKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKS 664
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
+ LI +GK + A + +EM + V ++N+L+ A V +++ +E
Sbjct: 665 KGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINE 724
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
F+ + ++ P+ +Y+ +I + A EM+K+G+ +++T+ T++
Sbjct: 725 ALICFQSM-KEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMI 783
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEIN 265
G G DA ++E P+ S+NA ++G++ + +A + E R K
Sbjct: 784 AGLAKVGNITDACSLFERFKANGGTPDAASFNALIEGMSHANRAIEAYHVFEETRLKGCR 843
Query: 266 PDVFTFYALIKGFVNEGNLEEA 287
+V +L+ LE+A
Sbjct: 844 INVKACISLLDALNKAECLEQA 865
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 85/207 (41%), Gaps = 9/207 (4%)
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
PH L + +YN ++ L + +L EM G + L+ R
Sbjct: 109 PHPLPAD----AYNAVLPFL--SHDLAAMEKVLEEMSVLGYGVPNPACADLVSALVRTRR 162
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
DAE++ M + RP +Y + +A +Q ++ALEL+ +M+ V F
Sbjct: 163 LDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTT 222
Query: 274 LIKGFVNEGNLEEAKRWYN--KSGC-GMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSER 330
L++ EG +E A + K C + ++ + + + G++D A+ S+
Sbjct: 223 LVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQG 282
Query: 331 CLVDQAPLQLVVDRLAKELRVEEAKEL 357
D ++ L K R+ EA+EL
Sbjct: 283 LKPDDVSYTSMIWVLCKAGRLSEAEEL 309
>gi|115480461|ref|NP_001063824.1| Os09g0542800 [Oryza sativa Japonica Group]
gi|32526676|dbj|BAC79199.1| chloroplast RNA processing 1 -like protein [Oryza sativa Japonica
Group]
gi|113632057|dbj|BAF25738.1| Os09g0542800 [Oryza sativa Japonica Group]
gi|125606498|gb|EAZ45534.1| hypothetical protein OsJ_30195 [Oryza sativa Japonica Group]
gi|215768653|dbj|BAH00882.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 543
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 145/310 (46%), Gaps = 15/310 (4%)
Query: 16 ATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGR--FRTNTGIYTGTVQRLANAKRF 73
A A P + S++ + K KRL + + D + F + +YT V + R
Sbjct: 210 AGAPDPATLASLLGALSK----KRLASEAQAMFDSYKSVFTPDVVLYTTLVHAWCRSGRL 265
Query: 74 RWIEEIL-EHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNA 132
E + E Q+ + +TA + A+Y +A A+++ +M C +FNA
Sbjct: 266 NEAERVFAEMQQAGVTPNVYTYTAVIDAMY-RAGQVPRAQELLCQMIDSGCPPNTATFNA 324
Query: 133 LLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKG--SLDSANTLLYEME 190
++ A V + + ++V + + +LG EPD+++YN +++ KG +LD+A +L M
Sbjct: 325 IMRAHVKAGRSEQVLQVHNQM-RQLGCEPDIITYNFLMETHCGKGQSNLDAAMKMLTRMI 383
Query: 191 KKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTK 250
KG D TFN +L G A K++E M + +PNV +YN + +EK
Sbjct: 384 AKGCIPDCHTFNPMLKLVLVLGNVNAARKLYERMQELQCKPNVVTYNLLMRLFNLEKSMD 443
Query: 251 KALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA----KRWYNKSGCGMNKAIFKLL 306
L + +M ++ + P+V T+ ALI+ F GN + A + + K ++ ++
Sbjct: 444 MVLRIKKDMDAQGVEPNVNTYAALIEAFCGRGNWKRAHMTLREMVEEKALKPTKPVYDMV 503
Query: 307 VPFVCEKGDL 316
+ + + G L
Sbjct: 504 LALLRKAGQL 513
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 121/281 (43%), Gaps = 10/281 (3%)
Query: 58 GIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDE 117
+Y + LA F +L+ ++ LI Y +A M A +F
Sbjct: 145 ALYAAMIDLLAKHHHFPLARHLLDEMRERSVPISAQLILALIRRYVRAEMPSEASDLFRR 204
Query: 118 MP--GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVD 175
M G + +LLGA + E +F +K PD+V Y T++ A+
Sbjct: 205 MEEYGAGAPDPA-TLASLLGALSKKRLASEAQAMFDS--YKSVFTPDVVLYTTLVHAWCR 261
Query: 176 KGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRS 235
G L+ A + EM++ G+ ++ T+ ++ Y G+ A+++ M++ PN +
Sbjct: 262 SGRLNEAERVFAEMQQAGVTPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSGCPPNTAT 321
Query: 236 YNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEG--NLEEAKRWYNK 293
+NA + ++++ L++ +MR PD+ T+ L++ +G NL+ A + +
Sbjct: 322 FNAIMRAHVKAGRSEQVLQVHNQMRQLGCEPDIITYNFLMETHCGKGQSNLDAAMKMLTR 381
Query: 294 ---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERC 331
GC + F ++ V G+++ A L +R +C
Sbjct: 382 MIAKGCIPDCHTFNPMLKLVLVLGNVNAARKLYERMQELQC 422
>gi|222632709|gb|EEE64841.1| hypothetical protein OsJ_19698 [Oryza sativa Japonica Group]
Length = 496
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 139/307 (45%), Gaps = 7/307 (2%)
Query: 58 GIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYG--KAAMFENARKVF 115
G V+RL A R +L + D + + TA + G K AR+VF
Sbjct: 3 GTTAAAVRRLCAAGDVRSALAMLARGTKSGDAALD-VTACTALVNGCCKGGDVAEARRVF 61
Query: 116 DEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVD 175
DEMP +++ AL+ + ++ LF+++ + G+EP+L +YN +I +
Sbjct: 62 DEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEM-RRGGVEPNLYTYNCLIGEWCR 120
Query: 176 KGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRS 235
G + A +L EM +GI +++++NTL+ G +G+ DA K+ + M RP++ +
Sbjct: 121 TGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIIT 180
Query: 236 YNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN--- 292
+N +DG + AL +M++ P T+ LI GF ++ A R +
Sbjct: 181 FNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMK 240
Query: 293 KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVE 352
+ G K + +L+ + + AF + VD ++V L E ++
Sbjct: 241 ERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMK 300
Query: 353 EAKELVE 359
+A++L +
Sbjct: 301 DARKLFQ 307
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 122/266 (45%), Gaps = 6/266 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHK 156
LI + + FE AR +FDEMP R + V+S+N L+ G C + K +D L D+
Sbjct: 114 LIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLL--DMMRT 171
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
G P ++++N ++ + G + +A +M+ G + +T+N L+ GF
Sbjct: 172 EGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTR 231
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
A + M + P +Y +D A E KA E++ M + D T+ L++
Sbjct: 232 ANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVR 291
Query: 277 GFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV 333
EGN+++A++ + + G + I+ +++ +G A L + +
Sbjct: 292 ALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIP 351
Query: 334 DQAPLQLVVDRLAKELRVEEAKELVE 359
+ A L + L K+ + +EA+ L++
Sbjct: 352 NSASYGLTIRVLCKDDKCQEAEALLD 377
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 76/168 (45%), Gaps = 9/168 (5%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN----SKKFDEVDGLFKDL 153
LIA + +A A + +M R E T +++ L+ + K F+ + G+
Sbjct: 219 LIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGM---- 274
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
K G+E D +Y +++A +G++ A L M +KG+ + ++ ++ G+ G
Sbjct: 275 -EKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGS 333
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS 261
A K+ M + PN SY + L + + ++A L+ +M +
Sbjct: 334 SYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDMET 381
>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 520
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 127/267 (47%), Gaps = 4/267 (1%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K + + A ++ EM R V+++ L+ + + E GL ++ K I P++
Sbjct: 162 KDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILK-NINPNI 220
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
+YNT+I +G + + LL M KKG++ D++ ++ L+ G+ G A++I+
Sbjct: 221 YTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLV 280
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
MV V P+V SYN ++GL K+ +A+ L+ EM K + PD T+ +LI G G
Sbjct: 281 MVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGR 340
Query: 284 LE---EAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL 340
+ + + + G N + L+ +C+ +LD A L + ++
Sbjct: 341 ITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTA 400
Query: 341 VVDRLAKELRVEEAKELVELGKTNSYC 367
++D L K R+++ + L + YC
Sbjct: 401 LIDGLCKGGRLKKGQALFQHLLVKGYC 427
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 108/217 (49%), Gaps = 7/217 (3%)
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
PD+V Y+TII +D A L EM +GI D+IT+ TL+ GF G+ +A +
Sbjct: 148 PDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGL 207
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
M+ N+ PN+ +YN +D L E + K++ L+ M K + PDV + L+ G+
Sbjct: 208 LNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCL 267
Query: 281 EGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAP 337
G +++AK+ + ++G + + +++ +C+ +D A NL + + + D
Sbjct: 268 VGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVT 327
Query: 338 LQLVVDRLAKELRV----EEAKELVELGKTNSYCRYN 370
++D L K R+ + KE+ G+ + YN
Sbjct: 328 YSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYN 364
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 103/221 (46%), Gaps = 4/221 (1%)
Query: 102 YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEP 161
Y + A+++F M V S+N ++ K+ DE L +++ HK + P
Sbjct: 265 YCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHK-NMIP 323
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
D V+Y+++I G + + L EM +G +L+T+N+LL G N A ++
Sbjct: 324 DTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALF 383
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
M ++PN +Y A +DGL + KK L + K DV+T+ +I G E
Sbjct: 384 MKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKE 443
Query: 282 GNLEEA---KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFA 319
G +EA K +GC N F++++ + EK + D A
Sbjct: 444 GMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKA 484
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 109/237 (45%), Gaps = 4/237 (1%)
Query: 127 VLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLL 186
++ F +LG+ V K + V L K + K GI PDLV+ + +I F G + + ++L
Sbjct: 10 IIEFGKILGSLVKMKHYPTVISLSKQMEAK-GIVPDLVTLSILINCFCHLGQMAFSFSVL 68
Query: 187 YEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIE 246
++ K G + + I NTL+ G G + + +V + + SY L+GL
Sbjct: 69 GKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKI 128
Query: 247 KQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNKAIF 303
+T+ A++L+ + + PDV + +I G + ++EA Y N G + +
Sbjct: 129 GETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITY 188
Query: 304 KLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVEL 360
L+ C G L AF L + + ++D L KE +V+E+K L+ +
Sbjct: 189 TTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAV 245
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 105/223 (47%), Gaps = 7/223 (3%)
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
KLG +P+ + NT++K KG + + ++ +G ++D +++ LL G G
Sbjct: 73 KLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETR 132
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
A K+ T+ + + RP+V Y+ +DGL +K +A +L EM ++ I PDV T+ LI
Sbjct: 133 CAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLI 192
Query: 276 KGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCL 332
GF G L EA N+ N + L+ +C++G + + NL +
Sbjct: 193 CGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVK 252
Query: 333 VDQAPLQLVVDRLAKELRVEEAKE----LVELGKTNSYCRYNL 371
D +++D V++AK+ +V+ G YN+
Sbjct: 253 PDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNI 295
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 95/212 (44%), Gaps = 3/212 (1%)
Query: 150 FKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFY 209
F D G + D VSY ++ G A LL +E + R D++ ++T++ G
Sbjct: 102 FHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLC 161
Query: 210 SNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVF 269
+ +A ++ M + P+V +Y + G + Q +A L+ EM K INP+++
Sbjct: 162 KDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIY 221
Query: 270 TFYALIKGFVNEGNLEEAKRW---YNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRT 326
T+ LI EG ++E+K K G + I+ +L+ C G++ A +
Sbjct: 222 TYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVM 281
Query: 327 FSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
D ++++ L K RV+EA L+
Sbjct: 282 VQTGVNPDVYSYNIIINGLCKGKRVDEAMNLL 313
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 91/233 (39%), Gaps = 7/233 (3%)
Query: 40 LVDKFKKSSDLGRFRTNTGI------YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEG 93
LV + +K+ + TG+ Y + L KR +L I
Sbjct: 267 LVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTV 326
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
+ LI K + EM R ++++N+LL ++ D+ LF +
Sbjct: 327 TYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKM 386
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
+ GI+P+ +Y +I G L L + KG +D+ T+ ++ G G
Sbjct: 387 KER-GIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGM 445
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINP 266
F +A + M + PN ++ + L + + KA +L+ EM +K + P
Sbjct: 446 FDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLLP 498
>gi|255548407|ref|XP_002515260.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545740|gb|EEF47244.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 878
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 130/271 (47%), Gaps = 7/271 (2%)
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
+ +I+ G+ E A+ VFD +TV +F+AL+ A S +E +F +
Sbjct: 192 LASAMISTLGRLGKVELAKAVFDTALKEGYGKTVYAFSALISAYGRSGYCNEAIKVFDSM 251
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANT--LLYEMEKKGIRLDLITFNTLLLGFYSN 211
G+ P+LV+YN +I A KG ++ + M G++ D ITFN+LL
Sbjct: 252 KSN-GLMPNLVTYNAVIDA-CGKGGVEFKKVVEIFDGMLSNGVQPDRITFNSLLAVCSRG 309
Query: 212 GRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTF 271
G + A +++ MV+ + ++ +YN LD + Q A E++ EM +K I P+V T+
Sbjct: 310 GLWEAARRLFSAMVDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTY 369
Query: 272 YALIKGFVNEGNLEEAKRWYNKS---GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFS 328
+I G+ G L++A +N+ G G+++ + L+ + G + A ++CK +
Sbjct: 370 STMIDGYAKVGRLDDALNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQALDVCKEMEN 429
Query: 329 ERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
D ++ K+ R +E + + E
Sbjct: 430 AGIRKDVVTYNALLAGYGKQYRYDEVRRVFE 460
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 134/296 (45%), Gaps = 49/296 (16%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+A+ + ++E AR++F M + +Q + ++N LL A + D + ++P K
Sbjct: 302 LLAVCSRGGLWEAARRLFSAMVDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPTK- 360
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSA-------------------NTLLY----------- 187
I P++V+Y+T+I + G LD A NTLL
Sbjct: 361 NILPNVVTYSTMIDGYAKVGRLDDALNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQA 420
Query: 188 -----EMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDG 242
EME GIR D++T+N LL G+ R+ + +++E M V PN+ +Y+ +D
Sbjct: 421 LDVCKEMENAGIRKDVVTYNALLAGYGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDV 480
Query: 243 LAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKAI 302
+ K+A+E+ E + + DV + ALI G +E + ++ M K
Sbjct: 481 YSKGGLYKEAMEVFREFKQAGLKADVVLYSALIDALCKNGLVESSVTLLDE----MTKEG 536
Query: 303 FKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQA--PLQLVVDRLAKELRVEEAKE 356
+ P V + AF R+ S +C+VD + L V+ L+ + V+EA E
Sbjct: 537 IR---PNVVTYNSIIDAFG---RSASAQCVVDDSGETTALQVESLS-SIVVQEAIE 585
>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 70/324 (21%), Positives = 146/324 (45%), Gaps = 45/324 (13%)
Query: 78 EILEHQKQYKDISKEGFTARLIAL------YGKAAMFENARKVFDEMPGRNCEQTVLSFN 131
+I++ K + +I K GF LI K NA ++ +M + C+ V+++N
Sbjct: 156 KIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYN 215
Query: 132 ALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEM-- 189
++ + ++ +E F ++ + GI P++V+Y++I+ F + G L+ A +L +M
Sbjct: 216 TVIDSLCKDRRANEAMYFFSEMVDQ-GIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIG 274
Query: 190 ---------------------------------EKKGIRLDLITFNTLLLGFYSNGRFAD 216
+ G+ D T++ L+ G+ + +
Sbjct: 275 RNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDE 334
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
A+K+++ MV P+VR YN ++G ++ +A L+ EM +++ PD T+ L++
Sbjct: 335 AQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQ 394
Query: 277 GFVNEGNLEEAKRWYNKS---GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV 333
GF G + A++ + + G + + +L+ +C+ G LD AF L K +
Sbjct: 395 GFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEP 454
Query: 334 DQAPLQLVVDRLAKELRVEEAKEL 357
+++ + ++E A+EL
Sbjct: 455 HICIYNILIQGMCNFGKLEAAREL 478
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 139/323 (43%), Gaps = 9/323 (2%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGR-FRTNTGIYTGTVQRLANAKRFRWIEEILEHQK 84
S++ G L FK+ +GR NT +T V L + E
Sbjct: 251 SILHGFCNLGQLNEATSLFKQM--IGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMT 308
Query: 85 QYKDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKF 143
+ + + +T + L+ Y + + A+K+FD M G+ +V +N L+ S++
Sbjct: 309 E-NGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRL 367
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT 203
+E L ++ + + PD V+Y+T+++ F G A L EM G+ D IT++
Sbjct: 368 NEAKTLLSEM-YDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSI 426
Query: 204 LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
LL G +G +A ++ + M + P++ YN + G+ + + A EL + K
Sbjct: 427 LLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKG 486
Query: 264 INPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAF 320
I P V T+ +I G + EG EA + K +GC N + + + GD A
Sbjct: 487 IQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAV 546
Query: 321 NLCKRTFSERCLVDQAPLQLVVD 343
L + D + Q+++D
Sbjct: 547 RLIEEMVGRGFSADSSTFQMLLD 569
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 122/260 (46%), Gaps = 6/260 (2%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEPD 162
K M AR+VF+ M E +++AL+ G C+ S+ DE LF + K G P
Sbjct: 293 KEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQ-MDEAQKLFDIMVGK-GFAPS 350
Query: 163 LVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWE 222
+ YN +I L+ A TLL EM + + D +T++TL+ GF GR A+K+++
Sbjct: 351 VRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFK 410
Query: 223 TMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEG 282
M + + P+ +Y+ LDGL +A L+ M+ +I P + + LI+G N G
Sbjct: 411 EMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFG 470
Query: 283 NLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQ 339
LE A+ ++ G + + +++ + ++G + A + ++ CL +
Sbjct: 471 KLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYN 530
Query: 340 LVVDRLAKELRVEEAKELVE 359
+ + + A L+E
Sbjct: 531 VAIQGFLRNGDPSNAVRLIE 550
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 116/240 (48%), Gaps = 6/240 (2%)
Query: 124 EQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSA 182
+ T ++F LL G C +K D V LF ++ K+G P L++Y TIIK G +A
Sbjct: 138 QPTHVTFGTLLNGLCSKAKIIDAVK-LFDEI-GKMGFAPSLITYTTIIKGLCKIGHTTNA 195
Query: 183 NTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDG 242
LL +ME+KG + D++ +NT++ + R +A + MV+ + PNV +Y++ L G
Sbjct: 196 LQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHG 255
Query: 243 LAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMN 299
Q +A L +M + + P+ TF L+ G EG + EA+R + ++G +
Sbjct: 256 FCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPD 315
Query: 300 KAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ L+ C + +D A L + ++++ K R+ EAK L+
Sbjct: 316 AYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLS 375
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 127/282 (45%), Gaps = 10/282 (3%)
Query: 88 DISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVD 147
I+ GF + L+ A +A F+++ G V+ FN LLG+ V K + V
Sbjct: 34 SITNGGFCSNYNNLHSVA----DAVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYSTVI 89
Query: 148 GLFKDLPHKLGIEPDLVSYNTIIKAFV--DKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
L K + I P++ + +I ++ + A + L +M K G++ +TF TLL
Sbjct: 90 SLCKQMDLS-NIRPNVYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLL 148
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEIN 265
G S + DA K+++ + M P++ +Y + GL T AL+L+ +M K
Sbjct: 149 NGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCK 208
Query: 266 PDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
PDV + +I + EA ++++ G N + ++ C G L+ A +L
Sbjct: 209 PDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSL 268
Query: 323 CKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKTN 364
K+ + + ++VD L KE + EA+ + E+ N
Sbjct: 269 FKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTEN 310
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 106/243 (43%), Gaps = 6/243 (2%)
Query: 53 FRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFT-ARLIALYGKAAMFENA 111
F + +Y + ++R + +L +D++ + T + L+ + +A + A
Sbjct: 347 FAPSVRVYNILINGHCKSRRLNEAKTLLSEMYD-RDLTPDTVTYSTLMQGFCQAGRPQVA 405
Query: 112 RKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIK 171
+K+F EM ++++ LL DE L K + + IEP + YN +I+
Sbjct: 406 QKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAM-QESKIEPHICIYNILIQ 464
Query: 172 AFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRP 231
+ G L++A L + KGI+ ++T+ ++ G G +A +++ MV P
Sbjct: 465 GMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLP 524
Query: 232 NVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY 291
N +YN + G A+ L+ EM + + D TF L+ E N E R+
Sbjct: 525 NSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLLD---LESNDEIISRFM 581
Query: 292 NKS 294
+S
Sbjct: 582 RRS 584
>gi|168038876|ref|XP_001771925.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676707|gb|EDQ63186.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 831
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 122/254 (48%), Gaps = 9/254 (3%)
Query: 74 RWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNAL 133
RW + L + D+ +I Y KA E A + M + E T+ +N L
Sbjct: 283 RWFQRALSENWHHNDV----IYNNIIHAYCKAGNMERAEAIMTAMEEQGLEATLGLYNML 338
Query: 134 LGACVNSKKFDEVDGLFKDLPHKL--GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEK 191
+ V+ + D+ +F+ L + G+ P +VSY +I + G +D A + EME
Sbjct: 339 MDGYVHCRAVDKCLNVFRRLKARTETGLSPTVVSYGCLINLYSKLGKMDKALQISNEMED 398
Query: 192 KGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKK 251
+GI+ + T++ ++ G+ G A+A ++E M N ++P+ +YN ++ Q +
Sbjct: 399 QGIKHNRKTYSMIIDGYVQLGDTANAFSVFEDMSNAGIKPDGITYNILMNAFCKNGQMNR 458
Query: 252 ALELVGEMRSKEINPDVFTFYALIKGFVNEGNLE---EAKRWYNKSGCGMNKAIFKLLVP 308
ALEL+ M S + P + T+ +I GF+ G+L E R +G + A + +++
Sbjct: 459 ALELLARMESGDCPPTLRTYTIIIDGFMKIGDLRMAFETVRDMKMAGFRPSAATYNVIMH 518
Query: 309 FVCEKGDLDFAFNL 322
+ + G +D A ++
Sbjct: 519 GLAQAGQMDRAASI 532
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 126/268 (47%), Gaps = 10/268 (3%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI LY K + A ++ +EM + + +++ ++ V +F+D+ +
Sbjct: 376 LINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFSVFEDMSNA- 434
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
GI+PD ++YN ++ AF G ++ A LL ME L T+ ++ GF + D
Sbjct: 435 GIKPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPTLRTYTIIIDGFM---KIGDL 491
Query: 218 EKIWETMVNMNV---RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYAL 274
+ET+ +M + RP+ +YN + GLA Q +A ++ EM ++P+ ++ L
Sbjct: 492 RMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEMVVAGVHPNERSYTTL 551
Query: 275 IKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERC 331
I+G+ G++ A +++N+ G + + L+ C+ G + + +
Sbjct: 552 IEGYACIGDMGLAFKYFNRIKEVGLKPDVIAYASLLKACCKAGRMQSTLAITAEMAAAGV 611
Query: 332 LVDQAPLQLVVDRLAKELRVEEAKELVE 359
++ +++D A+ + EA ++++
Sbjct: 612 PMNNYIYNILLDGWAQRGDMWEASDIMQ 639
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 110/258 (42%), Gaps = 14/258 (5%)
Query: 110 NARKVFDEMPGRNCEQTVLSFNALLGA-CVNSKKFDEVDGLFK----DLPHKLGIEPDLV 164
NA VF++M + +++N L+ A C N + ++ L + D P P L
Sbjct: 423 NAFSVFEDMSNAGIKPDGITYNILMNAFCKNGQMNRALELLARMESGDCP------PTLR 476
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
+Y II F+ G L A + +M+ G R T+N ++ G G+ A I + M
Sbjct: 477 TYTIIIDGFMKIGDLRMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEM 536
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
V V PN RSY ++G A A + ++ + PDV + +L+K G +
Sbjct: 537 VVAGVHPNERSYTTLIEGYACIGDMGLAFKYFNRIKEVGLKPDVIAYASLLKACCKAGRM 596
Query: 285 EEA---KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLV 341
+ +G MN I+ +L+ ++GD+ A ++ ++ E D
Sbjct: 597 QSTLAITAEMAAAGVPMNNYIYNILLDGWAQRGDMWEASDIMQKMRHEGLTPDIHSYTSF 656
Query: 342 VDRLAKELRVEEAKELVE 359
++ K + +A E +E
Sbjct: 657 INACCKAGDMLKATETIE 674
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 112/246 (45%), Gaps = 22/246 (8%)
Query: 103 GKAAMFENARKVFDEMPGRNCEQTVLSFNALLG--ACVNS-----KKFDEVDGLFKDLPH 155
+A + A + DEM S+ L+ AC+ K F+ +
Sbjct: 521 AQAGQMDRAASIIDEMVVAGVHPNERSYTTLIEGYACIGDMGLAFKYFNRIK-------- 572
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
++G++PD+++Y +++KA G + S + EM G+ ++ +N LL G+ G
Sbjct: 573 EVGLKPDVIAYASLLKACCKAGRMQSTLAITAEMAAAGVPMNNYIYNILLDGWAQRGDMW 632
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
+A I + M + + P++ SY + ++ KA E + +M+ + + P++ + LI
Sbjct: 633 EASDIMQKMRHEGLTPDIHSYTSFINACCKAGDMLKATETIEQMKQQGVQPNLQAYTTLI 692
Query: 276 KGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDL--DFAFNLCKRTFSER 330
G+ + E+A Y++ +G +K ++ ++ + + + + F+ R SE
Sbjct: 693 HGWASASYPEKALICYDEMKSAGMIPDKPLYHCIMTSLLSRAAVARETVFDGVLRVTSE- 751
Query: 331 CLVDQA 336
+VDQ
Sbjct: 752 -MVDQG 756
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 64/122 (52%), Gaps = 4/122 (3%)
Query: 202 NTLLLGFYSN-GRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMR 260
+TLL+ +Y G A +E+M + PNV SY + A+ + + A+ V EM
Sbjct: 195 HTLLVNYYGKRGDKHSARAAFESMRAAGIEPNVHSYTNLIHAYAVAQDLRGAIACVEEME 254
Query: 261 SKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS---GCGMNKAIFKLLVPFVCEKGDLD 317
++ ++P+ T+ +I G+ G++E A+RW+ ++ N I+ ++ C+ G+++
Sbjct: 255 AEGVSPNAATYSVIISGYGRLGDVEAAERWFQRALSENWHHNDVIYNNIIHAYCKAGNME 314
Query: 318 FA 319
A
Sbjct: 315 RA 316
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/254 (19%), Positives = 106/254 (41%), Gaps = 2/254 (0%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
+I G K +L R+ + + + FR + Y + LA A + I++
Sbjct: 481 IIDGFMKIGDL-RMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEMVVA 539
Query: 87 KDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEV 146
E LI Y A K F+ + + V+++ +LL AC + +
Sbjct: 540 GVHPNERSYTTLIEGYACIGDMGLAFKYFNRIKEVGLKPDVIAYASLLKACCKAGRMQST 599
Query: 147 DGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLL 206
+ ++ G+ + YN ++ + +G + A+ ++ +M +G+ D+ ++ + +
Sbjct: 600 LAITAEMA-AAGVPMNNYIYNILLDGWAQRGDMWEASDIMQKMRHEGLTPDIHSYTSFIN 658
Query: 207 GFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINP 266
G A + E M V+PN+++Y + G A +KAL EM+S + P
Sbjct: 659 ACCKAGDMLKATETIEQMKQQGVQPNLQAYTTLIHGWASASYPEKALICYDEMKSAGMIP 718
Query: 267 DVFTFYALIKGFVN 280
D ++ ++ ++
Sbjct: 719 DKPLYHCIMTSLLS 732
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/242 (19%), Positives = 97/242 (40%), Gaps = 41/242 (16%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF--------- 208
GIEP++ SY +I A+ L A + EME +G+ + T++ ++ G+
Sbjct: 222 GIEPNVHSYTNLIHAYAVAQDLRGAIACVEEMEAEGVSPNAATYSVIISGYGRLGDVEAA 281
Query: 209 ------------------YSN--------GRFADAEKIWETMVNMNVRPNVRSYNARLDG 242
Y+N G AE I M + + YN +DG
Sbjct: 282 ERWFQRALSENWHHNDVIYNNIIHAYCKAGNMERAEAIMTAMEEQGLEATLGLYNMLMDG 341
Query: 243 LAIEKQTKKALELVGEMRSKE---INPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGC 296
+ K L + ++++ ++P V ++ LI + G +++A + N+ G
Sbjct: 342 YVHCRAVDKCLNVFRRLKARTETGLSPTVVSYGCLINLYSKLGKMDKALQISNEMEDQGI 401
Query: 297 GMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKE 356
N+ + +++ + GD AF++ + + D ++++ K ++ A E
Sbjct: 402 KHNRKTYSMIIDGYVQLGDTANAFSVFEDMSNAGIKPDGITYNILMNAFCKNGQMNRALE 461
Query: 357 LV 358
L+
Sbjct: 462 LL 463
>gi|410109933|gb|AFV61046.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
micromera]
Length = 431
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 138/299 (46%), Gaps = 14/299 (4%)
Query: 86 YKDISKEGFTARL------IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
YK+I + G+ L + + K A VFD + +V+S+N L+ +
Sbjct: 130 YKEILECGYPXSLYFFNILMHRFCKDGDIRVAXSVFDAITKWGLRPSVVSYNTLMNGYIR 189
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
DE L K G++PD+ +Y+ +I + +D AN L EM KG+ + +
Sbjct: 190 LGDLDEGFRL-KSAMXASGVQPDVYTYSVLINGLCKEXKMDDANELFDEMLVKGLVPNXV 248
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
TF TL+ G NGR A +I++ M++ ++ P++ +YN + GL + K+A +L+ EM
Sbjct: 249 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNXLIYGLCKKGDLKQANDLIXEM 308
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLE---EAKRWYNKSGCGMNKAIFKLLVPFVCEKGDL 316
K + PD T+ LI G EGNL+ E + + ++ + L+ +C++G
Sbjct: 309 SMKGLKPDKITYTTLIDGCCKEGNLBTAFEHRXRMIEENIRLDDVAYTALISGLCQEGRX 368
Query: 317 DFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA----KELVELGKTNSYCRYNL 371
A + + S D ++++ K+ V + KE+ G S YN+
Sbjct: 369 VDAEKMLRXMLSVGLKPDAXTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNV 427
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 90/180 (50%), Gaps = 1/180 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K + A +++ +M ++ ++++N L+ + + L ++ K
Sbjct: 253 LIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNXLIYGLCKKGDLKQANDLIXEMSMK- 311
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD ++Y T+I +G+LB+A M ++ IRLD + + L+ G GR DA
Sbjct: 312 GLKPDKITYTTLIDGCCKEGNLBTAFEHRXRMIEENIRLDDVAYTALISGLCQEGRXVDA 371
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
EK+ M+++ ++P+ +Y ++ + K +L+ EM+ P V T+ L+ G
Sbjct: 372 EKMLRXMLSVGLKPDAXTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 105/222 (47%), Gaps = 10/222 (4%)
Query: 141 KKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLIT 200
K F V G +K++ + G L +N ++ F G + A ++ + K G+R +++
Sbjct: 121 KYFKLVWGFYKEIL-ECGYPXSLYFFNILMHRFCKDGDIRVAXSVFDAITKWGLRPSVVS 179
Query: 201 FNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMR 260
+NTL+ G+ G + ++ M V+P+V +Y+ ++GL E + A EL EM
Sbjct: 180 YNTLMNGYIRLGDLDEGFRLKSAMXASGVQPDVYTYSVLINGLCKEXKMDDANELFDEML 239
Query: 261 SKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKAIFKLLVPF------VCEKG 314
K + P+ TF LI G G ++ A Y + +++++ L+ + +C+KG
Sbjct: 240 VKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQM---LSQSLLPDLITYNXLIYGLCKKG 296
Query: 315 DLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKE 356
DL A +L + D+ ++D KE ++ A E
Sbjct: 297 DLKQANDLIXEMSMKGLKPDKITYTTLIDGCCKEGNLBTAFE 338
>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 86/386 (22%), Positives = 165/386 (42%), Gaps = 48/386 (12%)
Query: 26 SVIRGIYKENNL-KRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQK 84
SVI +Y++ L +R V+ F + + G + IY + L R + I +
Sbjct: 116 SVI-SVYRQVGLAERAVEMFYRIKEFG-CDPSVKIYNHVLDTLLGENRIQMIYMV----- 168
Query: 85 QYKDISKEGFTAR------LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACV 138
Y+D+ ++GF L+ K + A+K+ EM + C +S+ ++ +
Sbjct: 169 -YRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMC 227
Query: 139 N----------SKKFDEVDGLFKDLPHKL-------------------GIEPDLVSYNTI 169
+++F+ V ++ L + L GI P+++SY+T+
Sbjct: 228 EVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTL 287
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMV-NMN 228
I + G ++ A + L +M K+G ++ T ++L+ G + G DA +W M+
Sbjct: 288 INVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFG 347
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
++PNV +YN + G KA+ + M +P++ T+ +LI GF G+L+ A
Sbjct: 348 LQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAV 407
Query: 289 RWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRL 345
+NK SGC N ++ +V +C A +L + E C + L
Sbjct: 408 YIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGL 467
Query: 346 AKELRVEEAKELVELGKTNSYCRYNL 371
R++ A+++ + C N+
Sbjct: 468 CDAGRLDWAEKVFRQMEQQHRCPPNI 493
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 128/282 (45%), Gaps = 8/282 (2%)
Query: 52 RFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFT-ARLIALYGKAAMFEN 110
RF +Y + L ++ E++ + K IS + + LI + + E
Sbjct: 241 RFEPVVSVYNALINGLCKEHDYKGAFELMREMVE-KGISPNVISYSTLINVLCNSGQIEL 299
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGAC-VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTI 169
A +M R C + + ++L+ C + FD +D L+ + G++P++V+YNT+
Sbjct: 300 AFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALD-LWNQMIRGFGLQPNVVAYNTL 358
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
++ F G++ A ++ ME+ G ++ T+ +L+ GF G A IW M+
Sbjct: 359 VQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGC 418
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
PNV Y ++ L + K+A L+ M + P V TF A IKG + G L+ A++
Sbjct: 419 CPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEK 478
Query: 290 WY----NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTF 327
+ + C N + L+ + + ++ A+ L + F
Sbjct: 479 VFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIF 520
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 130/284 (45%), Gaps = 9/284 (3%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
V++ + +E+ + + FK ++ F+ + +++LA + ++ +L+ K
Sbjct: 46 VVKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQ 105
Query: 87 KDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEV 146
E +I++Y + + E A ++F + C+ +V +N +L + + +
Sbjct: 106 GFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMI 165
Query: 147 DGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLL 206
+++D+ G EP++ +YN ++KA +D A LL EM KG D +++ T++
Sbjct: 166 YMVYRDMKRD-GFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVIS 224
Query: 207 GFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINP 266
G + ++ E P V YNA ++GL E K A EL+ EM K I+P
Sbjct: 225 SMCEVGLVKEGRELAERF-----EPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISP 279
Query: 267 DVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLV 307
+V ++ LI N G +E A + K GC N LV
Sbjct: 280 NVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLV 323
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 117/259 (45%), Gaps = 7/259 (2%)
Query: 25 GSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILE-HQ 83
GS+I G K +L V + K G N +YT V+ L +F+ E ++E
Sbjct: 391 GSLINGFAKRGSLDGAVYIWNKMLTSGCC-PNVVVYTNMVEALCRHSKFKEAESLIEIMS 449
Query: 84 KQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRN-CEQTVLSFNALLGACVNSKK 142
K+ S F A + L A + A KVF +M ++ C ++++N LL + +
Sbjct: 450 KENCAPSVPTFNAFIKGL-CDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANR 508
Query: 143 FDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFN 202
+E GL +++ + G+E +YNT++ + G A L+ +M G D IT N
Sbjct: 509 IEEAYGLTREIFMR-GVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMN 567
Query: 203 TLLLGFYSNGRFADAEKIWETMV--NMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMR 260
++L + G+ A ++ + + RP+V SY + GL + + L+ M
Sbjct: 568 MIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMI 627
Query: 261 SKEINPDVFTFYALIKGFV 279
S I P + T+ LI F+
Sbjct: 628 SAGIVPSIATWSVLINCFI 646
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 82/197 (41%), Gaps = 35/197 (17%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
+ + F+ A + + M NC +V +FNA + ++ + D + +F+ + + P++
Sbjct: 434 RHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNI 493
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
V+YN ++ ++ A L E+ +G+ T+NTLL G
Sbjct: 494 VTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHG---------------- 537
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
S NA L G+ AL+LVG+M +PD T +I + +G
Sbjct: 538 -----------SCNAGLPGI--------ALQLVGKMMVDGKSPDEITMNMIILAYCKQGK 578
Query: 284 LEEAKRWYNKSGCGMNK 300
E A + + CG K
Sbjct: 579 AERAAQMLDLVSCGRRK 595
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 73/169 (43%), Gaps = 12/169 (7%)
Query: 149 LFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
LFK P +++ +I+ G +DS LL +M+ +G F +++ +
Sbjct: 71 LFKHTP---------LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVY 121
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDV 268
G A +++ + P+V+ YN LD L E + + + +M+ P+V
Sbjct: 122 RQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNV 181
Query: 269 FTFYALIKGFVNEGNLEEAKRW---YNKSGCGMNKAIFKLLVPFVCEKG 314
FT+ L+K ++ AK+ + GC + + ++ +CE G
Sbjct: 182 FTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVG 230
>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
Length = 479
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 136/283 (48%), Gaps = 14/283 (4%)
Query: 25 GSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQK 84
G+++ G+ K + ++ +K +L + + IY+ + L R + + +
Sbjct: 120 GTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFI-EM 178
Query: 85 QYKDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKF 143
Q K I + T + +I + + + A+++ EM R V++F+ L+ A V
Sbjct: 179 QDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDL 238
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKK----------- 192
+ L +++ G+ P++V+ NT++ D G L A + M+K
Sbjct: 239 NSAQDLLQEMISS-GVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFN 297
Query: 193 GIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKA 252
G+ D+ T+N L+ G + G+F +AE+++E M + + P+ +Y++ ++GL + + +A
Sbjct: 298 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEA 357
Query: 253 LELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSG 295
++ M SK +P++ TF LI G+ G +++ + + G
Sbjct: 358 TQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMG 400
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 125/270 (46%), Gaps = 13/270 (4%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I G++K+ + F + D G F + Y+ + ++ ++ + +L+ +
Sbjct: 157 AIIDGLWKDGRHTDAQNLFIEMQDKGIF-PDIVTYSCMINGFCSSGKWSEAQRLLQ-EML 214
Query: 86 YKDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
+ IS + T + LI K +A+ + EM V++ N LL +S K
Sbjct: 215 VRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLK 274
Query: 145 EVDGLFK---------DLPHKL-GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGI 194
+ +FK D H G+EPD+ +YN +I +++G A L EM +GI
Sbjct: 275 DALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI 334
Query: 195 RLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALE 254
D +T+++++ G R +A +++++M + + PN+ ++N + G LE
Sbjct: 335 VPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLE 394
Query: 255 LVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
L EM + I + T+ LI+GF GN+
Sbjct: 395 LFCEMGRRGIVANAITYITLIRGFRKVGNI 424
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 103/210 (49%), Gaps = 24/210 (11%)
Query: 150 FKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFY 209
++L H I+PD+V Y+ II G A L EM+ KGI D++T++ ++ GF
Sbjct: 142 MEELSH---IKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFC 198
Query: 210 SNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVF 269
S+G++++A+++ + M+ + P+V +++ ++ L E A +L+ EM S + P+V
Sbjct: 199 SSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVV 258
Query: 270 TFYALIKGFVNEGNLEEAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSE 329
T L+ G + G L++A + M K++ + D AFN +
Sbjct: 259 TCNTLLDGLCDSGKLKDALEMFK----AMQKSMMDI---------DATHAFNGVEP---- 301
Query: 330 RCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
D +++ L E + EA+EL E
Sbjct: 302 ----DVQTYNILISGLINEGKFLEAEELYE 327
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 109/248 (43%), Gaps = 15/248 (6%)
Query: 127 VLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLL 186
+ SFN L+ + K F L KLG P LV++NT++ + + A L
Sbjct: 15 IYSFNILIKCFCSCSKLPFALSTFGKLT-KLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73
Query: 187 YEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIE 246
++M K + +TF TL+ G GR +A + + MV ++PN +Y +DG+
Sbjct: 74 HQMCKPNV----VTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129
Query: 247 KQTKKALELVGEMRS-KEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKAIFKL 305
T AL L+ +M I PDV + A+I G +G +A+ + + +K IF
Sbjct: 130 GDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEM---QDKGIFPD 186
Query: 306 LVPF------VCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+V + C G A L + + D +++ L KE + A++L++
Sbjct: 187 IVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQ 246
Query: 360 LGKTNSYC 367
++ C
Sbjct: 247 EMISSGVC 254
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 81/153 (52%), Gaps = 1/153 (0%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
F A ++++EMP R +++++++ + DE +F + K P++V++N
Sbjct: 319 FLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSK-SFSPNIVTFN 377
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
T+I + G +D L EM ++GI + IT+ TL+ GF G + I++ M++
Sbjct: 378 TLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISS 437
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMR 260
V P+ + L GL +++ K+AL ++ E++
Sbjct: 438 GVYPDTITIRNMLTGLWSKEELKRALAMLEELQ 470
>gi|242041019|ref|XP_002467904.1| hypothetical protein SORBIDRAFT_01g036150 [Sorghum bicolor]
gi|241921758|gb|EER94902.1| hypothetical protein SORBIDRAFT_01g036150 [Sorghum bicolor]
Length = 558
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 108/213 (50%), Gaps = 7/213 (3%)
Query: 113 KVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKA 172
KV D +P + TV +N +L A + LF+ +P + PD S+ T ++
Sbjct: 132 KVLDLLPRDDDALTVSDYNDILSALARAGDHATAVALFRAMP----VAPDAQSFATAVQC 187
Query: 173 FVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPN 232
+G+ D A + EM +G R + TF+ ++ GR A ++++ M + P
Sbjct: 188 LCRQGAPDEAKLAIDEMVARGFRPSVATFSAVVGCLCKRGRVTKAMEVFDAMRALGCEPT 247
Query: 233 VRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN 292
+RSYN+ + GL + ++AL+L+ +++ + PD++TF ++ GF G EEA ++
Sbjct: 248 IRSYNSLVGGLCYVGRLEEALDLLNKLKDSPMTPDIYTFTIVLDGFCKVGRTEEATAIFH 307
Query: 293 KS-GCGMNKAIFK--LLVPFVCEKGDLDFAFNL 322
+ G G++ IF L+ C++G+ AF L
Sbjct: 308 DAIGMGLSPTIFTYNALLNGHCKEGNPLKAFAL 340
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 94/199 (47%), Gaps = 7/199 (3%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
+ A+ DEM R +V +F+A++G + + +F D LG EP + SYN+
Sbjct: 195 DEAKLAIDEMVARGFRPSVATFSAVVGCLCKRGRVTKAMEVF-DAMRALGCEPTIRSYNS 253
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
++ G L+ A LL +++ + D+ TF +L GF GR +A I+ + M
Sbjct: 254 LVGGLCYVGRLEEALDLLNKLKDSPMTPDIYTFTIVLDGFCKVGRTEEATAIFHDAIGMG 313
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE--INPDVFTFYALIKGFVNEGNLEE 286
+ P + +YNA L+G E KA L+ EM + PD +F ++ + G
Sbjct: 314 LSPTIFTYNALLNGHCKEGNPLKAFALLMEMCGNDAACPPDKISFGIVLTALLRAGETSA 373
Query: 287 AKRWYNKSGCGMNKAIFKL 305
A + Y + M +A F++
Sbjct: 374 AWQTYKR----MERAGFEV 388
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 88/225 (39%), Gaps = 17/225 (7%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGL---FKDLPHKLGIEPDLVSYN 167
A +VFD M CE T+ S+N+L+G + +E L KD P + PD+ ++
Sbjct: 232 AMEVFDAMRALGCEPTIRSYNSLVGGLCYVGRLEEALDLLNKLKDSP----MTPDIYTFT 287
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMV-- 225
++ F G + A + ++ G+ + T+N LL G G A + M
Sbjct: 288 IVLDGFCKVGRTEEATAIFHDAIGMGLSPTIFTYNALLNGHCKEGNPLKAFALLMEMCGN 347
Query: 226 NMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGF-----VN 280
+ P+ S+ L L +T A + M D L++G +
Sbjct: 348 DAACPPDKISFGIVLTALLRAGETSAAWQTYKRMERAGFEVDGRALDTLVRGLFRRCATD 407
Query: 281 EGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
L +AK + K SG + L+ + G++D A L
Sbjct: 408 VSALGDAKEVFAKVVASGHEPVSYTYCLMAQALARGGEVDAAVAL 452
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 66/167 (39%), Gaps = 6/167 (3%)
Query: 102 YGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIE 160
+ K E A +F + G T+ ++NALL G C L + +
Sbjct: 293 FCKVGRTEEATAIFHDAIGMGLSPTIFTYNALLNGHCKEGNPLKAFALLMEMCGNDAACP 352
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSN-----GRFA 215
PD +S+ ++ A + G +A ME+ G +D +TL+ G +
Sbjct: 353 PDKISFGIVLTALLRAGETSAAWQTYKRMERAGFEVDGRALDTLVRGLFRRCATDVSALG 412
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
DA++++ +V P +Y LA + A+ L+ +M K
Sbjct: 413 DAKEVFAKVVASGHEPVSYTYCLMAQALARGGEVDAAVALLEDMVRK 459
Score = 44.3 bits (103), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 80/210 (38%), Gaps = 41/210 (19%)
Query: 166 YNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMV 225
YN I+ A G +A L M + D +F T + G +A+ + MV
Sbjct: 149 YNDILSALARAGDHATAVALFRAMP---VAPDAQSFATAVQCLCRQGAPDEAKLAIDEMV 205
Query: 226 NMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLE 285
RP+V +++A + L + KA+E+ MR+ P + ++ +L+ G G LE
Sbjct: 206 ARGFRPSVATFSAVVGCLCKRGRVTKAMEVFDAMRALGCEPTIRSYNSLVGGLCYVGRLE 265
Query: 286 EAKRWYNK-SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDR 344
EA NK M I+ TF+ +V+D
Sbjct: 266 EALDLLNKLKDSPMTPDIY----------------------TFT-----------IVLDG 292
Query: 345 LAKELRVEEAKEL----VELGKTNSYCRYN 370
K R EEA + + +G + + YN
Sbjct: 293 FCKVGRTEEATAIFHDAIGMGLSPTIFTYN 322
>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 107/222 (48%), Gaps = 12/222 (5%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
F A+++F EM + ++SF++L+ ++ D+ F+D+ K G+ PD V Y
Sbjct: 87 FSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQALVYFRDMK-KFGLVPDNVIYT 145
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
++ + G++ A + EM ++G LD+I +NT+L G DA+K+++ MV
Sbjct: 146 VLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVER 205
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
P+ ++ + G + KAL L G M + I PD+ + LI GF G +E+A
Sbjct: 206 GALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKA 265
Query: 288 KRWYNKSGCGM-------NKAIFKLLVPFVCEKGDLDFAFNL 322
++ GM N + +L+ C G + AF L
Sbjct: 266 SELWD----GMISRKIFPNHITYGILINAYCSVGHVSEAFRL 303
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 107/233 (45%), Gaps = 10/233 (4%)
Query: 67 LANAKRFRWIEEILEHQKQYKDISKEGFTAR------LIALYGKAAMFENARKVFDEMPG 120
+A R R +++ L + ++D+ K G L+ Y + A K+ DEM
Sbjct: 113 MAVFSRNRHLDQALVY---FRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLE 169
Query: 121 RNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLD 180
+ C V+++N +L K + D LF ++ + G PD ++ T+I G++
Sbjct: 170 QGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVER-GALPDFYTFTTLIHGHCQDGNMT 228
Query: 181 SANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARL 240
A +L M ++ I+ D++ +NTL+ GF G A ++W+ M++ + PN +Y +
Sbjct: 229 KALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILI 288
Query: 241 DGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK 293
+ +A L M K I P + T +IKG+ G+ +A + +
Sbjct: 289 NAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGR 341
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 103/200 (51%), Gaps = 3/200 (1%)
Query: 163 LVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWE 222
+V+YNT+I A+ +G L+ A ++ M KG++ L T+N ++ G GR+A A+ I
Sbjct: 1 MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60
Query: 223 TMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEG 282
M+N+ + P+ +YN L +A E+ GEM + + PD+ +F +L+ F
Sbjct: 61 EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120
Query: 283 NLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQ 339
+L++A ++ K G + I+ +L+ C G++ A + + C++D
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 180
Query: 340 LVVDRLAKELRVEEAKELVE 359
+++ L KE + +A +L +
Sbjct: 181 TILNGLCKEKMLTDADKLFD 200
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 84/172 (48%), Gaps = 1/172 (0%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K M +A K+FDEM R +F L+ + LF + + I+PD+
Sbjct: 188 KEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQR-NIKPDI 246
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
V+YNT+I F G ++ A+ L M + I + IT+ L+ + S G ++A ++W+
Sbjct: 247 VAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDV 306
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
M+ ++P + + N + G + KA E +G M +K + PD ++ LI
Sbjct: 307 MIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLI 358
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 95/190 (50%), Gaps = 4/190 (2%)
Query: 127 VLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLL 186
++++N L+GA +E + + K G++P L +YN II KG A +L
Sbjct: 1 MVTYNTLIGAYCREGLLEEAFEIMNSMADK-GLKPSLFTYNAIINGLCKKGRYARAKGIL 59
Query: 187 YEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIE 246
EM G+ D T+NTLL+ F++A++I+ M+ V P++ S+++ + +
Sbjct: 60 IEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRN 119
Query: 247 KQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIF 303
+ +AL +M+ + PD + L+ G+ GN+ EA + + + GC ++ +
Sbjct: 120 RHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAY 179
Query: 304 KLLVPFVCEK 313
++ +C++
Sbjct: 180 NTILNGLCKE 189
>gi|356522850|ref|XP_003530056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Glycine max]
Length = 545
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 112/213 (52%), Gaps = 5/213 (2%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A+ VF+ + V S+N ++ K+ +E L+K++ H+ + P+ V+YN++I
Sbjct: 319 AKHVFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEM-HQKNMVPNTVTYNSLI 377
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
G + A L+ EM +G ++IT+N+L+ G NG+ A + M + ++
Sbjct: 378 DGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQ 437
Query: 231 PNVRSYNARLDGLAIE-KQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
P++ + N L GL + K+ K A L ++ K +P+V+T+ +I G EG L+EA
Sbjct: 438 PDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYA 497
Query: 290 WYNK---SGCGMNKAIFKLLVPFVCEKGDLDFA 319
+K SGC N FK+++ + EKG+ D A
Sbjct: 498 LQSKMEDSGCSPNAITFKIIICALLEKGETDKA 530
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 107/206 (51%), Gaps = 4/206 (1%)
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
+G+ PD+ SYN +I ++ A L EM +K + + +T+N+L+ G +GR +
Sbjct: 329 MGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISY 388
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
A + + M + NV +YN+ ++GL Q KA+ L+ +M+ + I PD++T L+
Sbjct: 389 AWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLH 448
Query: 277 GFVNEGN-LEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCL 332
G + +G L+ A+ + G N + +++ C++G LD A+ L + C
Sbjct: 449 GLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCS 508
Query: 333 VDQAPLQLVVDRLAKELRVEEAKELV 358
+ ++++ L ++ ++A++L+
Sbjct: 509 PNAITFKIIICALLEKGETDKAEKLL 534
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 91/205 (44%), Gaps = 32/205 (15%)
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
K G +PD V+ T+IK KG + A ++ +G RLD +++ TL+ G G
Sbjct: 126 KWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGVCKIGETR 185
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
A ++ + PNV YN +D L K +A L EM K I+ +V T+ A+I
Sbjct: 186 AAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAII 245
Query: 276 KGFVNEGNLEEAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQ 335
GF G L EA + +N+ + K + P V + +N
Sbjct: 246 HGFCIVGKLTEALGF-------LNEMVLKAINPDV-------YIYN-------------- 277
Query: 336 APLQLVVDRLAKELRVEEAKELVEL 360
+VD L KE +V+EAK ++ +
Sbjct: 278 ----TLVDALHKEGKVKEAKNVLAV 298
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 88/204 (43%), Gaps = 2/204 (0%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMP 119
Y + RL KR + + Q + LI K+ A + DEM
Sbjct: 338 YNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMH 397
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGS- 178
R V+++N+L+ + + D+ L + + GI+PD+ + N ++ + KG
Sbjct: 398 DRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQ-GIQPDMYTLNILLHGLLCKGKR 456
Query: 179 LDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNA 238
L +A L ++ KG ++ T+N ++ G G +A + M + PN ++
Sbjct: 457 LKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAITFKI 516
Query: 239 RLDGLAIEKQTKKALELVGEMRSK 262
+ L + +T KA +L+ EM ++
Sbjct: 517 IICALLEKGETDKAEKLLCEMIAR 540
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 71/171 (41%), Gaps = 2/171 (1%)
Query: 56 NTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVF 115
NT Y + L + R + ++++ + LI K + A +
Sbjct: 369 NTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALI 428
Query: 116 DEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFV 174
++M + + + + N LL G K+ GLF+DL K G P++ +YN II
Sbjct: 429 NKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDK-GYHPNVYTYNIIIYGHC 487
Query: 175 DKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMV 225
+G LD A L +ME G + ITF ++ G AEK+ M+
Sbjct: 488 KEGLLDEAYALQSKMEDSGCSPNAITFKIIICALLEKGETDKAEKLLCEMI 538
>gi|297724361|ref|NP_001174544.1| Os05g0583900 [Oryza sativa Japonica Group]
gi|42491383|gb|AAS16889.1| hypothetical protein [Oryza sativa Japonica Group]
gi|255676609|dbj|BAH93272.1| Os05g0583900 [Oryza sativa Japonica Group]
Length = 467
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 139/307 (45%), Gaps = 7/307 (2%)
Query: 58 GIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYG--KAAMFENARKVF 115
G V+RL A R +L + D + + TA + G K AR+VF
Sbjct: 3 GTTAAAVRRLCAAGDVRSALAMLARGTKSGDAALD-VTACTALVNGCCKGGDVAEARRVF 61
Query: 116 DEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVD 175
DEMP +++ AL+ + ++ LF+++ + G+EP+L +YN +I +
Sbjct: 62 DEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEM-RRGGVEPNLYTYNCLIGEWCR 120
Query: 176 KGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRS 235
G + A +L EM +GI +++++NTL+ G +G+ DA K+ + M RP++ +
Sbjct: 121 TGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIIT 180
Query: 236 YNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN--- 292
+N +DG + AL +M++ P T+ LI GF ++ A R +
Sbjct: 181 FNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMK 240
Query: 293 KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVE 352
+ G K + +L+ + + AF + VD ++V L E ++
Sbjct: 241 ERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMK 300
Query: 353 EAKELVE 359
+A++L +
Sbjct: 301 DARKLFQ 307
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 122/266 (45%), Gaps = 6/266 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHK 156
LI + + FE AR +FDEMP R + V+S+N L+ G C + K +D L D+
Sbjct: 114 LIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLL--DMMRT 171
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
G P ++++N ++ + G + +A +M+ G + +T+N L+ GF
Sbjct: 172 EGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTR 231
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
A + M + P +Y +D A E KA E++ M + D T+ L++
Sbjct: 232 ANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVR 291
Query: 277 GFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV 333
EGN+++A++ + + G + I+ +++ +G A L + +
Sbjct: 292 ALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIP 351
Query: 334 DQAPLQLVVDRLAKELRVEEAKELVE 359
+ A L + L K+ + +EA+ L++
Sbjct: 352 NSASYGLTIRVLCKDDKCQEAEALLD 377
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 76/168 (45%), Gaps = 9/168 (5%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN----SKKFDEVDGLFKDL 153
LIA + +A A + +M R E T +++ L+ + K F+ + G+
Sbjct: 219 LIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGM---- 274
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
K G+E D +Y +++A +G++ A L M +KG+ + ++ ++ G+ G
Sbjct: 275 -EKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGS 333
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS 261
A K+ M + PN SY + L + + ++A L+ +M +
Sbjct: 334 SYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDMET 381
>gi|410109939|gb|AFV61049.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rehmannii]
Length = 420
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 137/290 (47%), Gaps = 10/290 (3%)
Query: 86 YKDISKEGFTARL------IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
Y++I + G+ A L + + K A VFD + +V+S+N L+ +
Sbjct: 119 YEEILECGYPASLYFFNILMHRFCKDGDIRVAPLVFDAITKWGLRPSVVSYNTLMNGYIR 178
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
DE L K G++PD+ +Y+ +I + +D AN L EM KG+ + +
Sbjct: 179 LGDLDEGFRL-KSAMRASGVQPDVYTYSVLINGLCKESXMDDANELFDEMLVKGLVPNXV 237
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
TF TL+ G NGR A +I++ M++ + P++ +YN + GL + +A L+ EM
Sbjct: 238 TFTTLIDGHCKNGRVDLAMEIYKQMLSQXLLPDJITYNTLVYGLCKKGDLNQAHGLIDEM 297
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLE---EAKRWYNKSGCGMNKAIFKLLVPFVCEKGDL 316
K + PD FT+ LI G EG+L+ E ++ + ++ + L+ +C++G
Sbjct: 298 XXKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRS 357
Query: 317 DFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKTNSY 366
A + + S D ++++ K+ V + +L++ + N +
Sbjct: 358 XDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGH 407
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 88/180 (48%), Gaps = 1/180 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K + A +++ +M + ++++N L+ ++ GL ++ K
Sbjct: 242 LIDGHCKNGRVDLAMEIYKQMLSQXLLPDJITYNTLVYGLCKKGDLNQAHGLIDEMXXK- 300
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD +Y T+I +G LD+A M ++ IRLD + + L+ G GR DA
Sbjct: 301 GLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSXDA 360
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
EK+ M+++ ++P+ +Y ++ + K +L+ EM+ P V T+ L+ G
Sbjct: 361 EKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPXVVTYNVLMNG 420
>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
Length = 608
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 98/190 (51%), Gaps = 1/190 (0%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K M AR VF+ M + E + ++NAL+ + +E +F+ + + G P +
Sbjct: 310 KEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQ-GCAPGV 368
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
SYN +I F +D A +LL EM K + D +T++TL+ G GR +A I++
Sbjct: 369 HSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKE 428
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M + + PN+ +Y+ LDG +AL+L+ M+ K++ P++ LI+G G
Sbjct: 429 MCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGK 488
Query: 284 LEEAKRWYNK 293
LE AK ++K
Sbjct: 489 LEVAKELFSK 498
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 121/253 (47%), Gaps = 6/253 (2%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A VF +M C+ V+++N ++ + + ++ ++ + GI P++ +YN ++
Sbjct: 212 AVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDR-GIPPNVFTYNCMV 270
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
F G L+ A L EM + + D +T L+ G G ++A ++ETM V
Sbjct: 271 HGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVE 330
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK-- 288
PN+ +YNA +DG +++ +A ++ M + P V ++ LI GF ++EAK
Sbjct: 331 PNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSL 390
Query: 289 --RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLA 346
Y+K+ + + L+ +C+ G A N+ K S L + +++D
Sbjct: 391 LAEMYHKA-LNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFC 449
Query: 347 KELRVEEAKELVE 359
K ++EA +L++
Sbjct: 450 KHGHLDEALKLLK 462
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 108/264 (40%), Gaps = 33/264 (12%)
Query: 96 ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPH 155
+ + + K + + ++M V S N L+ D + +
Sbjct: 92 GKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVSILGKM-F 150
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
KLGI P ++N +I ++G + A L EM ++G ++I++NT++ G G +
Sbjct: 151 KLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTS 210
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
A +++ M +P+V +YN +D L ++ A+E + EM + I P+VFT+ ++
Sbjct: 211 MAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMV 270
Query: 276 KGFVNEGNLEEAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQ 335
GF G L EA R + K + D
Sbjct: 271 HGFCILGQLNEATRLF--------------------------------KEMVGRDVMPDT 298
Query: 336 APLQLVVDRLAKELRVEEAKELVE 359
L ++VD L KE V EA+ + E
Sbjct: 299 VTLTILVDGLCKEGMVSEARLVFE 322
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 79/184 (42%), Gaps = 3/184 (1%)
Query: 178 SLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYN 237
S+D A Y M + R + F L F +++ + M V NV S N
Sbjct: 68 SIDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLN 127
Query: 238 ARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KS 294
++ L A+ ++G+M I+P TF ALI G NEG ++EA +N +
Sbjct: 128 VLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRR 187
Query: 295 GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA 354
G N + ++ +C+ G+ A ++ K+ C D ++D L K+ V +A
Sbjct: 188 GHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDA 247
Query: 355 KELV 358
E +
Sbjct: 248 MEFL 251
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 91/243 (37%), Gaps = 69/243 (28%)
Query: 102 YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHK----- 156
Y + A+KVF+ M + C V S+N L+ S++ DE L ++ HK
Sbjct: 343 YCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPD 402
Query: 157 -----------------------------LGIEPDLVSYNTIIKAFVDKGSLDSANTLLY 187
G+ P+LV+Y+ ++ F G LD A LL
Sbjct: 403 TVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLK 462
Query: 188 EMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVR------------- 234
M++K + +++ L+ G + G+ A++++ + +RP +R
Sbjct: 463 SMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEG 522
Query: 235 ----------------------SYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFY 272
SYN + G + + A+ L+ EM K + ++ TF
Sbjct: 523 LSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQ 582
Query: 273 ALI 275
L+
Sbjct: 583 MLL 585
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 76/186 (40%), Gaps = 1/186 (0%)
Query: 56 NTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVF 115
+T Y+ +Q L R + I + Y + + L+ + K + A K+
Sbjct: 402 DTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLL 461
Query: 116 DEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVD 175
M + E ++ L+ + K + LF L GI P + +Y +IK +
Sbjct: 462 KSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFAD-GIRPTIRTYTVMIKGLLK 520
Query: 176 KGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRS 235
+G D A L +ME G + ++N ++ GF N + A ++ + MV N+ +
Sbjct: 521 EGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLST 580
Query: 236 YNARLD 241
+ LD
Sbjct: 581 FQMLLD 586
>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
protein [Medicago truncatula]
gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
protein [Medicago truncatula]
Length = 970
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 116/233 (49%), Gaps = 4/233 (1%)
Query: 130 FNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEM 189
+NAL+ A + D+ + L+K++ H + + + V+Y+ +I +F +G LD A + M
Sbjct: 361 YNALINALCKGEDLDKAELLYKNM-HSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRM 419
Query: 190 EKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQT 249
+ GIR + +N+L+ G G + AE ++ M+N + P ++ + G + Q
Sbjct: 420 IEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQV 479
Query: 250 KKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLL 306
+KA +L EM KEI P V+TF ALI G + + EA + ++ + + + ++
Sbjct: 480 EKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVM 539
Query: 307 VPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ C+ ++D AF L + + D + ++ L RV AK+ ++
Sbjct: 540 IEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFID 592
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 126/280 (45%), Gaps = 22/280 (7%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILE---HQ 83
+I G K+ ++KRL KK D G R ++ IYT + + F+ E L+ +
Sbjct: 644 LIDGAMKQQDMKRLFGLLKKMYDQG-LRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTE 702
Query: 84 KQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKF 143
K + ++ +TA + L K + A +F++M N +++ L +
Sbjct: 703 KCFPNVVT--YTAFMNGL-CKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNM 759
Query: 144 DEVDGLFKDLPHKL--GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITF 201
E DL H++ G+ + +YN +I+ F G L A +L EM + GI D IT+
Sbjct: 760 KEA----TDLHHEMLKGLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITY 815
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS 261
+T++ +G A ++W+TM+ V P+ ++N + G + KA EL +M S
Sbjct: 816 STIIYEHCRSGDVGAAVELWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELRNDMLS 875
Query: 262 KEINP---------DVFTFYALIKGFVNEGNLEEAKRWYN 292
+ + P D+ L+ G G ++ A R Y+
Sbjct: 876 RGLKPRQILQLQKRDLGVCNFLMHGGCVTGEVDTALRLYH 915
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 122/266 (45%), Gaps = 6/266 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI+ Y K E A K++ EM + +V +F AL+ ++ + E LF ++ +
Sbjct: 469 LISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVER- 527
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
I+P V+YN +I+ + ++D A LL +M G+ D T+ L+ G S GR + A
Sbjct: 528 KIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAA 587
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ + + N++ N Y+A L G + + +AL EM + IN D+ LI G
Sbjct: 588 KDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDG 647
Query: 278 FVNEGNLEE----AKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV 333
+ + +++ K+ Y++ G + I+ ++ ++G + +E+C
Sbjct: 648 AMKQQDMKRLFGLLKKMYDQ-GLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFP 706
Query: 334 DQAPLQLVVDRLAKELRVEEAKELVE 359
+ ++ L K ++ A L E
Sbjct: 707 NVVTYTAFMNGLCKVGEIDRAGHLFE 732
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 114/249 (45%), Gaps = 9/249 (3%)
Query: 71 KRFRWIEEILEHQKQYKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLS 129
K F +E++L + + + +T R LI+ A+ D++ +N + +
Sbjct: 551 KAFELLEDML-----HNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMC 605
Query: 130 FNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEM 189
++ALL + E ++ + GI DLV + +I + + + LL +M
Sbjct: 606 YSALLHGYCGQGRLTEALSASCEMIQR-GINMDLVCHAVLIDGAMKQQDMKRLFGLLKKM 664
Query: 190 EKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQT 249
+G+R D + + +++ + G F + + + MV PNV +Y A ++GL +
Sbjct: 665 YDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEI 724
Query: 250 KKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGM--NKAIFKLLV 307
+A L +M + I+P+ T+ + EGN++EA +++ G+ N A + +L+
Sbjct: 725 DRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEMLKGLLANTATYNILI 784
Query: 308 PFVCEKGDL 316
C+ G L
Sbjct: 785 RGFCKLGRL 793
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 116/281 (41%), Gaps = 40/281 (14%)
Query: 77 EEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGA 136
E+ LE KQ K S GF L+ Y + +A V M G V + +A+L
Sbjct: 134 EKFLESHKQCKFSSTLGFDF-LVHSYLQNTRVFDAVVVLRLMLGNTLLPEVRTLSAILNG 192
Query: 137 CVNSKKFDEVDGLFKDLPHKLGIEPD---------------------------------- 162
+ +KF V +F D G++PD
Sbjct: 193 LLRIRKFILVWEVF-DESVNAGVKPDPYTCSAVIRSLCELKDFCRAKEKILWMESNRFDL 251
Query: 163 -LVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
+V+YN +I G + A + + +KG++ D++T+ TL+LGF +F D +
Sbjct: 252 SIVTYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLM 311
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
MV + P + + +DGL + A +LV ++ P++F + ALI
Sbjct: 312 NEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKG 371
Query: 282 GNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFA 319
+L++A+ Y + +N + +L+ C++G LD A
Sbjct: 372 EDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVA 412
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/303 (20%), Positives = 129/303 (42%), Gaps = 7/303 (2%)
Query: 24 IGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRF-RWIEEILEH 82
+ +++ G+ + + + F +S + G + + + ++ L K F R E+IL
Sbjct: 186 LSAILNGLLRIRKFILVWEVFDESVNAG-VKPDPYTCSAVIRSLCELKDFCRAKEKILWM 244
Query: 83 QKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKK 142
+ D+S + + L + E A +V + + ++ V+++ L+ ++
Sbjct: 245 ESNRFDLSIVTYNVLIHGLCKGGGVLE-ALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQ 303
Query: 143 FDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFN 202
FD+ L ++ +LG P + + ++ KG++DSA L+ ++ + G +L +N
Sbjct: 304 FDDGICLMNEMV-ELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYN 362
Query: 203 TLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
L+ AE +++ M +MN+ N +Y+ +D A G M
Sbjct: 363 ALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIED 422
Query: 263 EINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFA 319
I ++ + +LI G G+L A+ Y K G F L+ C+ ++ A
Sbjct: 423 GIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKA 482
Query: 320 FNL 322
F L
Sbjct: 483 FKL 485
Score = 40.8 bits (94), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 39/187 (20%), Positives = 75/187 (40%), Gaps = 26/187 (13%)
Query: 148 GLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI-------- 199
GL K++ H S+ ++ A V AN+LL+ + +G +
Sbjct: 87 GLHKNMNHTT------TSFAILVHALVQNKLFWPANSLLHTLLLRGSDPKFVFEKFLESH 140
Query: 200 ---------TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTK 250
F+ L+ + N R DA + M+ + P VR+ +A L+GL ++
Sbjct: 141 KQCKFSSTLGFDFLVHSYLQNTRVFDAVVVLRLMLGNTLLPEVRTLSAILNGLLRIRKFI 200
Query: 251 KALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR---WYNKSGCGMNKAIFKLLV 307
E+ E + + PD +T A+I+ + AK W + ++ + +L+
Sbjct: 201 LVWEVFDESVNAGVKPDPYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLI 260
Query: 308 PFVCEKG 314
+C+ G
Sbjct: 261 HGLCKGG 267
>gi|410109915|gb|AFV61037.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
brasiliensis]
Length = 427
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 137/314 (43%), Gaps = 55/314 (17%)
Query: 66 RLANAKRFRWI-----EEILEHQKQ----------YKDISKEGFTARL------IALYGK 104
RL +F W+ ++LEH + YK I + G+ A L + + K
Sbjct: 92 RLTREHKF-WVPFDTCRKVLEHLMKLKYFKLVWGFYKXILECGYPASLYFFNILMHRFCK 150
Query: 105 AAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLV 164
A+ VFD + +V+S+N L+ + DE L K G++PD+
Sbjct: 151 DGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL-KSAMLASGVQPDVY 209
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
+Y+ +I + +D AN L EM KG+ + +TF TL+ G NGR A +I++ M
Sbjct: 210 TYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKRM 269
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
++ ++ P++ +YN + GL + K+A L+ EM K + PD T+ LI G
Sbjct: 270 LSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDG------- 322
Query: 285 EEAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDR 344
C++GDLD AF KR E +D ++
Sbjct: 323 -------------------------CCKEGDLDTAFEHRKRMIQENIXLDDVAYTALISG 357
Query: 345 LAKELRVEEAKELV 358
L +E R +A++++
Sbjct: 358 LCQEGRSVDAEKML 371
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 87/180 (48%), Gaps = 1/180 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K + A +++ M ++ ++++N L+ + L ++ K
Sbjct: 249 LIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMK- 307
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD ++Y T+I +G LD+A M ++ I LD + + L+ G GR DA
Sbjct: 308 GLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSVDA 367
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
EK+ M+++ ++PN R+Y ++ + K +L+ EM+ P V T+ L+ G
Sbjct: 368 EKMLREMLSVGLKPNXRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 427
>gi|225464410|ref|XP_002269194.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic [Vitis vinifera]
Length = 929
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 134/265 (50%), Gaps = 4/265 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI LY K A +V M + + +++ L+ V K + +F+D+ K
Sbjct: 470 LINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVV-KD 528
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD+V YN II+AF G++D A + EM+K+ R TF ++ GF +G A
Sbjct: 529 GLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMRRA 588
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+I++ M P V ++NA + GL + Q +KA+E++ EM I+P+ T+ ++ G
Sbjct: 589 LEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIMHG 648
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
+ + G+ +A ++ K G ++ ++ L+ C+ G + A + + S++ +
Sbjct: 649 YASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRN 708
Query: 335 QAPLQLVVDRLAKELRVEEAKELVE 359
+++D A+ V EA EL++
Sbjct: 709 TFVYNILIDGWARRGDVWEAAELMQ 733
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 99/216 (45%), Gaps = 2/216 (0%)
Query: 74 RWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNAL 133
R I + E QK+ + F +I + ++ A ++FD M C TV +FNAL
Sbjct: 552 RAIRTVKEMQKERHRPTTRTFMP-IIHGFARSGDMRRALEIFDMMRWSGCIPTVHTFNAL 610
Query: 134 LGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKG 193
+ V + ++ + ++ GI P+ +Y TI+ + G A +++ +G
Sbjct: 611 ILGLVEKCQMEKAVEILDEMS-LAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEG 669
Query: 194 IRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKAL 253
+ LD+ T+ LL +GR A + M + + N YN +DG A +A
Sbjct: 670 LELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRNTFVYNILIDGWARRGDVWEAA 729
Query: 254 ELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
EL+ +M+ + + PD+ T+ + I G+++ A +
Sbjct: 730 ELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATK 765
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 121/265 (45%), Gaps = 12/265 (4%)
Query: 27 VIRGIYKENNLKR---LVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQ 83
+I G + +++R + D + S + T + G V++ K ++E+
Sbjct: 575 IIHGFARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEM---- 630
Query: 84 KQYKDISKEGFTARLIALYGKAAMFENAR--KVFDEMPGRNCEQTVLSFNALLGACVNSK 141
IS T I ++G A++ + + + F ++ E V ++ ALL AC S
Sbjct: 631 -SLAGISPNEHTYTTI-MHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSG 688
Query: 142 KFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITF 201
+ + +++ + I + YN +I + +G + A L+ +M+++G++ D+ T+
Sbjct: 689 RMQSALAVTREMSSQ-KIPRNTFVYNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTY 747
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS 261
+ + G A K + M + V+PN+++Y + G A +KAL+ EM+S
Sbjct: 748 TSFINACCKAGDMQRATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKS 807
Query: 262 KEINPDVFTFYALIKGFVNEGNLEE 286
+ PD ++ L+ ++ ++ E
Sbjct: 808 AGLKPDKAVYHCLMTSLLSRASVAE 832
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 127/292 (43%), Gaps = 19/292 (6%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++IR N+ R + K+ R R T + + A + R EI + +
Sbjct: 539 NIIRAFCGMGNMDRAIRTVKEMQK-ERHRPTTRTFMPIIHGFARSGDMRRALEIFDMMRW 597
Query: 86 YKDI-SKEGFTARLIALYGKAAMFENARKVFDEM------PGRNCEQTVLSFNALLGACV 138
I + F A ++ L K M E A ++ DEM P + T++ A LG
Sbjct: 598 SGCIPTVHTFNALILGLVEKCQM-EKAVEILDEMSLAGISPNEHTYTTIMHGYASLGD-- 654
Query: 139 NSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL 198
K F+ L + G+E D+ +Y ++KA G + SA + EM + I +
Sbjct: 655 TGKAFEYFTKLKTE-----GLELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRNT 709
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
+N L+ G+ G +A ++ + M V+P++ +Y + ++ ++A + + E
Sbjct: 710 FVYNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATKTIQE 769
Query: 259 MRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLV 307
M + P++ T+ LI G+ E+A + + + +G +KA++ L+
Sbjct: 770 MEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKSAGLKPDKAVYHCLM 821
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 79/171 (46%), Gaps = 9/171 (5%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G P ++SY +I ++ G + A + ME GI+ ++ T++ L+ GF +A+A
Sbjct: 459 GFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANA 518
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++E +V ++P+V YN + +A+ V EM+ + P TF +I G
Sbjct: 519 FAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHG 578
Query: 278 FVNEGNLEEA------KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
F G++ A RW SGC F L+ + EK ++ A +
Sbjct: 579 FARSGDMRRALEIFDMMRW---SGCIPTVHTFNALILGLVEKCQMEKAVEI 626
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/265 (16%), Positives = 116/265 (43%), Gaps = 4/265 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+ + K A E A F E R+ + + ++ A + + + L +++ +
Sbjct: 365 LVGGFAKIADAEAADHWFKEAKERHTTLNAIIYGNIIYAHCQACNMTQAEALVREMEEE- 423
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
GI+ + Y+T++ + G+ + + +++ G +I++ L+ + G+ + A
Sbjct: 424 GIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVISYGCLINLYIKIGKVSKA 483
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ + M ++ N+++Y+ ++G K A + ++ + PDV + +I+
Sbjct: 484 LEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVVKDGLKPDVVLYNNIIRA 543
Query: 278 FVNEGNLEEAKRWYNKSGCGMNKAIFKLLVPFV---CEKGDLDFAFNLCKRTFSERCLVD 334
F GN++ A R + ++ + +P + GD+ A + C+
Sbjct: 544 FCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMRRALEIFDMMRWSGCIPT 603
Query: 335 QAPLQLVVDRLAKELRVEEAKELVE 359
++ L ++ ++E+A E+++
Sbjct: 604 VHTFNALILGLVEKCQMEKAVEILD 628
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 78/188 (41%), Gaps = 22/188 (11%)
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
SK +E + KD L EP+ ++ +++AF E KK R +
Sbjct: 250 SKWHEERESSRKDFRKVLETEPE--NWQAVVQAF--------------ERIKKPSRKE-- 291
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
F ++ + G A +E+M + P Y + + A+ + ++AL V +M
Sbjct: 292 -FGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSCVRKM 350
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS---GCGMNKAIFKLLVPFVCEKGDL 316
+ + I + T+ L+ GF + E A W+ ++ +N I+ ++ C+ ++
Sbjct: 351 KEEGIEMSLVTYSILVGGFAKIADAEAADHWFKEAKERHTTLNAIIYGNIIYAHCQACNM 410
Query: 317 DFAFNLCK 324
A L +
Sbjct: 411 TQAEALVR 418
>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
Length = 368
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 127/250 (50%), Gaps = 4/250 (1%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A +F +M C+ V++++ ++ + ++ +E +F + K GI P++ +YN++I
Sbjct: 29 AAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAK-GISPNIFTYNSLI 87
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
+ + A+ +L EM I +++TF+ L+ F G +A + +TM M V
Sbjct: 88 QGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVE 147
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
PNV +Y++ ++G +++ + +A +L M +K PDVF++ LI G+ + EAK+
Sbjct: 148 PNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQL 207
Query: 291 YNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAK 347
+N+ G + + L+ +C+ G L A +L K + L D +++D K
Sbjct: 208 FNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCK 267
Query: 348 ELRVEEAKEL 357
+ + +A L
Sbjct: 268 QGYLAKAFRL 277
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 90/165 (54%), Gaps = 2/165 (1%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
+A +FE ARK+FD M + C+ V S+N L+ +K+ E LF ++ H+ G+ PD+
Sbjct: 163 QAEVFE-ARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQ-GLTPDI 220
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
VSYNT+I G L A+ L M G DL T++ LL GF G A A +++
Sbjct: 221 VSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRA 280
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDV 268
M + ++PN+ YN +D + + K+A +L E+ + + P++
Sbjct: 281 MQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNM 325
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 146/308 (47%), Gaps = 11/308 (3%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I G+ K FKK + G + + Y+ + L +R +I + K
Sbjct: 15 TIINGLCKIGETVAAAGLFKKMGEAG-CQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKA 73
Query: 86 YKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
K IS FT LI + + A + +EM N +++F+ L+
Sbjct: 74 -KGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVF 132
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
E G+ K + ++G+EP++V+Y++++ + + + A L M KG + D+ ++N L
Sbjct: 133 EARGVLKTMT-EMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNIL 191
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+ G+ R +A++++ M++ + P++ SYN +DGL + ++A +L M +
Sbjct: 192 INGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGN 251
Query: 265 NPDVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFN 321
PD+ T+ L+ GF +G L +A R + + N ++ +L+ +C+ +L A
Sbjct: 252 LPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEA-- 309
Query: 322 LCKRTFSE 329
++ FSE
Sbjct: 310 --RKLFSE 315
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 105/228 (46%), Gaps = 23/228 (10%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G +PD+ +Y TII G +A L +M + G + D++T++T++ + R +A
Sbjct: 5 GYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEA 64
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
I+ M + PN+ +YN+ + GL + ++A ++ EM S I P++ TF LI
Sbjct: 65 LDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINI 124
Query: 278 FVNEGNLEEAKRWYNKSGCGMNKAIFKLLV-PFVCEKGDLDFAFNLCKRTFSER------ 330
F EGN+ EA+ G+ K + ++ V P V L ++L F R
Sbjct: 125 FCKEGNVFEAR--------GVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVM 176
Query: 331 ----CLVDQAPLQLVVDRLAKELRVEEAK----ELVELGKTNSYCRYN 370
C D ++++ K R+ EAK E++ G T YN
Sbjct: 177 ITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYN 224
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 69/131 (52%), Gaps = 3/131 (2%)
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
M +G + D+ T+ T++ G G A +++ M +P+V +Y+ +D L +++
Sbjct: 1 MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS---GCGMNKAIFKL 305
+AL++ M++K I+P++FT+ +LI+G N EA N+ N F L
Sbjct: 61 VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120
Query: 306 LVPFVCEKGDL 316
L+ C++G++
Sbjct: 121 LINIFCKEGNV 131
>gi|449483905|ref|XP_004156728.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g40400-like [Cucumis sativus]
Length = 636
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 135/273 (49%), Gaps = 15/273 (5%)
Query: 71 KRFRWIEEILEHQKQYKDISKEGFTARLIA----LYGKAAMFENAR--KVFDEMPGRNCE 124
K + ++ I E +K + K GF +IA L G A M +A+ ++++EM
Sbjct: 198 KAYVKLDLIHESYWSFKKMVKLGFVPNVIACNCILNGLAKMKSDAQCWELYEEMGRIGVH 257
Query: 125 QTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANT 184
+FN L ++++G + + + G +PD+V+YNT+I ++V +G L+ A
Sbjct: 258 SNAYTFNILTYVLCRDGDVNKINGFLEKMEEE-GFDPDVVTYNTLIDSYVRRGRLEDAFY 316
Query: 185 LLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLA 244
L M ++G+ DL+++ +L+ G GR +A +++ M++ + P+V YN +
Sbjct: 317 LYKIMYRRGVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVVLYNTLIGAYC 376
Query: 245 IEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNKA 301
+ ++A L+ EM I+PD FT L++G+ EG L A K G +
Sbjct: 377 KDGMLQEARSLLHEMIGIGIHPDSFTCRILVEGYGREGRLISALNLVVEIQKLGVTVAHD 436
Query: 302 IFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
I+K L+ +C + D FA ++ ER L D
Sbjct: 437 IYKYLIISLC-REDRPFA----AKSLLERILED 464
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 76/166 (45%), Gaps = 1/166 (0%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A ++F M R + V+ +N L+GA E L ++ +GI PD + ++
Sbjct: 349 AHQLFHRMIDRGMDPDVVLYNTLIGAYCKDGMLQEARSLLHEMI-GIGIHPDSFTCRILV 407
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
+ + +G L SA L+ E++K G+ + + L++ R A+ + E ++ + +
Sbjct: 408 EGYGREGRLISALNLVVEIQKLGVTVAHDIYKYLIISLCREDRPFAAKSLLERILEDSFQ 467
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
P+ YN ++ +AL L EM ++ P T+ +LI
Sbjct: 468 PDSDIYNKLIESFCRSNNVSEALLLKLEMINRNYKPTTDTYKSLIH 513
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 81/199 (40%), Gaps = 3/199 (1%)
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
V + +IKA+V + + +M K G ++I N +L G A +++E
Sbjct: 191 VIFEMLIKAYVKLDLIHESYWSFKKMVKLGFVPNVIACNCILNGLAKMKSDAQCWELYEE 250
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M + V N ++N L + K + +M + +PDV T+ LI +V G
Sbjct: 251 MGRIGVHSNAYTFNILTYVLCRDGDVNKINGFLEKMEEEGFDPDVVTYNTLIDSYVRRGR 310
Query: 284 LEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL 340
LE+A Y + G + + L+ +C G + A L R D
Sbjct: 311 LEDAFYLYKIMYRRGVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVVLYNT 370
Query: 341 VVDRLAKELRVEEAKELVE 359
++ K+ ++EA+ L+
Sbjct: 371 LIGAYCKDGMLQEARSLLH 389
>gi|224113413|ref|XP_002316488.1| predicted protein [Populus trichocarpa]
gi|222865528|gb|EEF02659.1| predicted protein [Populus trichocarpa]
Length = 941
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 134/265 (50%), Gaps = 4/265 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI +Y K A +V M + + +++ L+ + K + +F+D+ K
Sbjct: 475 LINMYTKIGKVSKALEVSKMMKSVGIKHNMKTYSMLINGFLKLKDWTNAFAVFEDVI-KD 533
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD+V YN IIKAF G++D A ++ EM+K+ R TF ++ GF G A
Sbjct: 534 GLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKERCRPTSRTFMPIIHGFARAGEMRRA 593
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+I++ M P V ++NA + GL +++ +KA+E++ EM ++PD T+ ++ G
Sbjct: 594 LEIFDMMRRSGCIPTVHTFNALVLGLVEKRKMEKAVEILDEMALAGVSPDEHTYTTIMHG 653
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
+ G+ +A ++ K G ++ ++ L+ C+ G + A + + +++ +
Sbjct: 654 YAALGDTGKAFEYFTKMRNEGLQLDVFTYEALLKACCKSGRMQSALAVTREMNAQKIPRN 713
Query: 335 QAPLQLVVDRLAKELRVEEAKELVE 359
+++D A+ + EA +L++
Sbjct: 714 TFVYNILIDGWARRGDIWEAADLMQ 738
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 97/216 (44%), Gaps = 2/216 (0%)
Query: 74 RWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNAL 133
R I + E QK+ + F +I + +A A ++FD M C TV +FNAL
Sbjct: 557 RAIHMVKEMQKERCRPTSRTFMP-IIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNAL 615
Query: 134 LGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKG 193
+ V +K ++ + ++ G+ PD +Y TI+ + G A +M +G
Sbjct: 616 VLGLVEKRKMEKAVEILDEMA-LAGVSPDEHTYTTIMHGYAALGDTGKAFEYFTKMRNEG 674
Query: 194 IRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKAL 253
++LD+ T+ LL +GR A + M + N YN +DG A +A
Sbjct: 675 LQLDVFTYEALLKACCKSGRMQSALAVTREMNAQKIPRNTFVYNILIDGWARRGDIWEAA 734
Query: 254 ELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
+L+ +M + + PD+ T+ + I G++ A +
Sbjct: 735 DLMQQMNQEGVQPDIHTYTSFINACCKAGDMLRATK 770
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 118/266 (44%), Gaps = 12/266 (4%)
Query: 27 VIRGIYKENNLKR---LVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQ 83
+I G + ++R + D ++S + T + G V++ K ++E+
Sbjct: 580 IIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRKMEKAVEILDEM---- 635
Query: 84 KQYKDISKEGFTARLIALYGKAAMFENAR--KVFDEMPGRNCEQTVLSFNALLGACVNSK 141
+S + T I ++G AA+ + + + F +M + V ++ ALL AC S
Sbjct: 636 -ALAGVSPDEHTYTTI-MHGYAALGDTGKAFEYFTKMRNEGLQLDVFTYEALLKACCKSG 693
Query: 142 KFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITF 201
+ + +++ + I + YN +I + +G + A L+ +M ++G++ D+ T+
Sbjct: 694 RMQSALAVTREM-NAQKIPRNTFVYNILIDGWARRGDIWEAADLMQQMNQEGVQPDIHTY 752
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS 261
+ + G A K E M V+PNV++Y + G A +KAL E++
Sbjct: 753 TSFINACCKAGDMLRATKTMEEMEAAGVKPNVKTYTTLIHGWANASLPEKALSCFEELKL 812
Query: 262 KEINPDVFTFYALIKGFVNEGNLEEA 287
+ PD ++ L+ ++ + EA
Sbjct: 813 AGLKPDKAVYHCLMTSLLSRATVAEA 838
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 102/228 (44%), Gaps = 4/228 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I Y +A + A + EM + + ++ ++ + ++ +FK L +
Sbjct: 405 IIYAYCQACNMDRAEALVREMEEEGIDAPLDIYHTMMDGYTMIRNEEKCLIVFKRL-KEC 463
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G P +++Y +I + G + A + M+ GI+ ++ T++ L+ GF + +A
Sbjct: 464 GFAPSVITYGCLINMYTKIGKVSKALEVSKMMKSVGIKHNMKTYSMLINGFLKLKDWTNA 523
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++E ++ ++P+V YN + +A+ +V EM+ + P TF +I G
Sbjct: 524 FAVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKERCRPTSRTFMPIIHG 583
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
F G + A ++ +SGC F LV + EK ++ A +
Sbjct: 584 FARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRKMEKAVEI 631
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 129/316 (40%), Gaps = 19/316 (6%)
Query: 54 RTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARK 113
R G+ G R + R R E + + + D S +T+ LI Y E A
Sbjct: 294 RREFGLMVGYYARRGDMHRARQTFESM--RARGIDPSSHVYTS-LIHAYAVGRDMEEALS 350
Query: 114 VFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAF 173
+M E ++++++ ++G + D FK + + Y II A+
Sbjct: 351 CVRKMNEEGIEMSLVTYSIVVGGFAKFGNAEAADCWFKKAKER-HTNLNAYIYGNIIYAY 409
Query: 174 VDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNV 233
++D A L+ EME++GI L ++T++ G+ +++ + P+V
Sbjct: 410 CQACNMDRAEALVREMEEEGIDAPLDIYHTMMDGYTMIRNEEKCLIVFKRLKECGFAPSV 469
Query: 234 RSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN- 292
+Y ++ + KALE+ M+S I ++ T+ LI GF+ + K W N
Sbjct: 470 ITYGCLINMYTKIGKVSKALEVSKMMKSVGIKHNMKTYSMLINGFL------KLKDWTNA 523
Query: 293 --------KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDR 344
K G + ++ ++ C G++D A ++ K ERC ++
Sbjct: 524 FAVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKERCRPTSRTFMPIIHG 583
Query: 345 LAKELRVEEAKELVEL 360
A+ + A E+ ++
Sbjct: 584 FARAGEMRRALEIFDM 599
>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 121/257 (47%), Gaps = 6/257 (2%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEPD 162
K + A +F EM + V+++ L+ G C+ SK E GL ++ K I P+
Sbjct: 211 KYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASK-LKEAIGLLNEMVLK-TINPN 268
Query: 163 LVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWE 222
+ +YN ++ A +G + A +L M K ++ D+IT++TL+ G++ A+ ++
Sbjct: 269 VYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFN 328
Query: 223 TMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEG 282
M M V P+V SY ++G K +AL L EM K + P + T+ +LI G G
Sbjct: 329 AMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSG 388
Query: 283 NLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQ 339
+ ++ G N + L+ +C+ G LD A L + +
Sbjct: 389 RISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFT 448
Query: 340 LVVDRLAKELRVEEAKE 356
+++D L K R+++A+E
Sbjct: 449 ILLDGLCKGGRLKDAQE 465
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 109/221 (49%), Gaps = 4/221 (1%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
+ A+ VF+ M V S+ L+ +K DE LFK++ H+ + P +V+Y+
Sbjct: 320 LKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEM-HQKNMVPGIVTYS 378
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
++I G + L+ EM +GI ++IT+N+L+ G NG A ++ M +
Sbjct: 379 SLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQ 438
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+RP ++ LDGL + K A E ++ +K + DV+ + +I G +G LEEA
Sbjct: 439 GIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEA 498
Query: 288 KRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKR 325
+K +GC N F +++ + +K + D A L ++
Sbjct: 499 LTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQ 539
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 96/203 (47%), Gaps = 3/203 (1%)
Query: 160 EPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEK 219
+P++ YNTII A + A L EM KGI D++T+ TL+ GF + +A
Sbjct: 196 KPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIG 255
Query: 220 IWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFV 279
+ MV + PNV +YN +D L E + K+A ++ M + PDV T+ L+ G+
Sbjct: 256 LLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYF 315
Query: 280 NEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQA 336
L++A+ +N G + + +L+ C+ +D A NL K + +
Sbjct: 316 LVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIV 375
Query: 337 PLQLVVDRLAKELRVEEAKELVE 359
++D L K R+ +L++
Sbjct: 376 TYSSLIDGLCKSGRISYVWDLID 398
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 107/230 (46%), Gaps = 7/230 (3%)
Query: 73 FRWIEEILEHQKQYKDISKEGFTAR------LIALYGKAAMFENARKVFDEMPGRNCEQT 126
+ + E+ + Q + +S G T LI + K M + A +F EM +N
Sbjct: 314 YFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPG 373
Query: 127 VLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLL 186
++++++L+ S + V L ++ + GI ++++YN++I G LD A L
Sbjct: 374 IVTYSSLIDGLCKSGRISYVWDLIDEMRDR-GIPANVITYNSLIDGLCKNGHLDRAIALF 432
Query: 187 YEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIE 246
+M+ +GIR TF LL G GR DA++ ++ ++ +V YN ++G +
Sbjct: 433 NKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQ 492
Query: 247 KQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGC 296
++AL ++ +M P+ TF +I + ++A++ + C
Sbjct: 493 GLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQMIC 542
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 82/170 (48%), Gaps = 3/170 (1%)
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
K G +P +++ T+IK KG ++ A ++ +GI+ D +++ TL+ G G
Sbjct: 122 KRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTR 181
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
A K+ + +PNV YN +D L + +A L EM +K I+ DV T+ LI
Sbjct: 182 GAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLI 241
Query: 276 KGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
GF L+EA N+ N + +LV +C++G + A N+
Sbjct: 242 YGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNV 291
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 63/133 (47%)
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
P ++ +N I+ +F +A +L + +E KGI+ DLIT N L+ F G+ +
Sbjct: 57 PPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
++ +P+ ++ + GL ++ Q KAL ++ ++ I D ++ LI G
Sbjct: 117 LAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCK 176
Query: 281 EGNLEEAKRWYNK 293
G+ A + K
Sbjct: 177 IGDTRGAIKLVRK 189
>gi|242073384|ref|XP_002446628.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
gi|241937811|gb|EES10956.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
Length = 614
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 125/276 (45%), Gaps = 10/276 (3%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
++ +AR +FDEM R TV++FN L+ + + + L + L K G+ PD+
Sbjct: 256 RSGKLASARNMFDEMLRRGVPPTVVTFNTLMSGMCKASDLNSANAL-RGLMAKAGVAPDV 314
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
+Y ++ G + A + EM ++G+ + + F TL+ G A ++
Sbjct: 315 YTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVVFTTLIDAHCKEGNVAAGLELHRE 374
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M ++ ++ +YNA +GL + K A ++V EMR+ + PD T+ LI GF EG
Sbjct: 375 MATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVTYTTLIDGFCKEGE 434
Query: 284 LE---EAKRWYNKSGCGMNKAIFKLLVPFVCEKG-DLDFAFNLCKRTFSERCLVDQAPLQ 339
L+ E K+ + G +++ + L+ + + G +D LC+ D
Sbjct: 435 LDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERILCE-MMEAGLEPDNTTYT 493
Query: 340 LVVDRLAKELRVEEA----KELVELGKTNSYCRYNL 371
+V+D K V+ KE+ G+ YN+
Sbjct: 494 MVIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVTYNV 529
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 116/258 (44%), Gaps = 4/258 (1%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMP 119
Y +Q L A R + E+ E ++ LI + K ++ EM
Sbjct: 317 YGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVVFTTLIDAHCKEGNVAAGLELHREMA 376
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL 179
R + ++++NAL + + + +++ + G++PD V+Y T+I F +G L
Sbjct: 377 TRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNN-GLKPDKVTYTTLIDGFCKEGEL 435
Query: 180 DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNAR 239
D A + EM +G+ LD +T+ TL+ G +GR D+E+I M+ + P+ +Y
Sbjct: 436 DMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERILCEMMEAGLEPDNTTYTMV 495
Query: 240 LDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS---GC 296
+D K +L+ EM++K P V T+ ++ GF G ++ A N G
Sbjct: 496 IDAFCKNSDVKTGFKLLKEMQNKGRKPGVVTYNVVMNGFCILGQMKNADMLLNAMLNIGV 555
Query: 297 GMNKAIFKLLVPFVCEKG 314
+ + +L+ C+ G
Sbjct: 556 CPDDITYNILLDGHCKHG 573
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 3/203 (1%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ P+ +N +++ + G L SA + EM ++G+ ++TFNTL+ G A
Sbjct: 239 GVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLMSGMCKASDLNSA 298
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ M V P+V +Y A + GL + + A+E+ EMR + +NP+ F LI
Sbjct: 299 NALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVVFTTLIDA 358
Query: 278 FVNEGNLE---EAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
EGN+ E R G + + L +C DL A ++ + + D
Sbjct: 359 HCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPD 418
Query: 335 QAPLQLVVDRLAKELRVEEAKEL 357
+ ++D KE ++ A E+
Sbjct: 419 KVTYTTLIDGFCKEGELDMAMEM 441
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 121/270 (44%), Gaps = 9/270 (3%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I KE N+ ++ ++ + G +T+ Y L + + +I+E +
Sbjct: 354 TLIDAHCKEGNVAAGLELHREMATRG-IKTDLVAYNALANGLCRVRDLKAANDIVEEMRN 412
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
+ LI + K + A ++ EM +++ L+ S + +
Sbjct: 413 NGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVD 472
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
+ + ++ + G+EPD +Y +I AF + + LL EM+ KG + ++T+N ++
Sbjct: 473 SERILCEM-MEAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVTYNVVM 531
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEIN 265
GF G+ +A+ + M+N+ V P+ +YN LDG + + A EL +K +
Sbjct: 532 NGFCILGQMKNADMLLNAMLNIGVCPDDITYNILLDGHCKHGKVRDAEEL---KSAKGMV 588
Query: 266 PDVFTFYALIKGFVNEGNLEEAKRWYNKSG 295
D + +LI FV +++ + Y+ +G
Sbjct: 589 SDFGLYTSLINEFVK----KKSTKSYHDNG 614
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 120/280 (42%), Gaps = 16/280 (5%)
Query: 25 GSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQK 84
G+ ++G+ K ++ V+ F++ + G NT ++T + A+ K + +
Sbjct: 318 GAFMQGLCKAGRIQDAVEMFEEMRERG-VNPNTVVFTTLID--AHCKE----GNVAAGLE 370
Query: 85 QYKDISKEGFTARLIALYGKAAMF------ENARKVFDEMPGRNCEQTVLSFNALLGACV 138
+++++ G L+A A + A + +EM + +++ L+
Sbjct: 371 LHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVTYTTLIDGFC 430
Query: 139 NSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL 198
+ D + +++ + G+ D V+Y T+I G + +L EM + G+ D
Sbjct: 431 KEGELDMAMEMKQEMSDE-GVALDEVTYTTLISGLSKSGRSVDSERILCEMMEAGLEPDN 489
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
T+ ++ F N K+ + M N +P V +YN ++G I Q K A L+
Sbjct: 490 TTYTMVIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVTYNVVMNGFCILGQMKNADMLLNA 549
Query: 259 MRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGM 298
M + + PD T+ L+ G G + +A+ KS GM
Sbjct: 550 MLNIGVCPDDITYNILLDGHCKHGKVRDAEEL--KSAKGM 587
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 82/190 (43%), Gaps = 3/190 (1%)
Query: 178 SLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYN 237
S+ A ++ G+ + FN L+ +G+ A A +++ M+ V P V ++N
Sbjct: 224 SVPEAYAFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFN 283
Query: 238 ARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KS 294
+ G+ A L G M + PDV+T+ A ++G G +++A + +
Sbjct: 284 TLMSGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRER 343
Query: 295 GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA 354
G N +F L+ C++G++ L + + D + + L + ++ A
Sbjct: 344 GVNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAA 403
Query: 355 KELVELGKTN 364
++VE + N
Sbjct: 404 NDIVEEMRNN 413
>gi|449450197|ref|XP_004142850.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g40400-like [Cucumis sativus]
Length = 632
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 135/273 (49%), Gaps = 15/273 (5%)
Query: 71 KRFRWIEEILEHQKQYKDISKEGFTARLIA----LYGKAAMFENAR--KVFDEMPGRNCE 124
K + ++ I E +K + K GF +IA L G A M +A+ ++++EM
Sbjct: 194 KAYVKLDLIHESYWSFKKMVKLGFVPNVIACNCILNGLAKMKSDAQCWELYEEMGRIGVH 253
Query: 125 QTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANT 184
+FN L ++++G + + + G +PD+V+YNT+I ++V +G L+ A
Sbjct: 254 SNAYTFNILTYVLCRDGDVNKINGFLEKMEEE-GFDPDVVTYNTLIDSYVRRGRLEDAFY 312
Query: 185 LLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLA 244
L M ++G+ DL+++ +L+ G GR +A +++ M++ + P+V YN +
Sbjct: 313 LYKIMYRRGVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVVLYNTLIGAYC 372
Query: 245 IEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNKA 301
+ ++A L+ EM I+PD FT L++G+ EG L A K G +
Sbjct: 373 KDGMLQEARSLLHEMIGIGIHPDSFTCRILVEGYGREGRLISALNLVVEIQKLGVTVAHD 432
Query: 302 IFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
I+K L+ +C + D FA ++ ER L D
Sbjct: 433 IYKYLIISLC-REDRPFA----AKSLLERILED 460
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 76/166 (45%), Gaps = 1/166 (0%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A ++F M R + V+ +N L+GA E L ++ +GI PD + ++
Sbjct: 345 AHQLFHRMIDRGMDPDVVLYNTLIGAYCKDGMLQEARSLLHEMI-GIGIHPDSFTCRILV 403
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
+ + +G L SA L+ E++K G+ + + L++ R A+ + E ++ + +
Sbjct: 404 EGYGREGRLISALNLVVEIQKLGVTVAHDIYKYLIISLCREDRPFAAKSLLERILEDSFQ 463
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
P+ YN ++ +AL L EM ++ P T+ +LI
Sbjct: 464 PDSDIYNKLIESFCRSNNVSEALLLKLEMINRNYKPTTDTYKSLIH 509
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 81/199 (40%), Gaps = 3/199 (1%)
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
V + +IKA+V + + +M K G ++I N +L G A +++E
Sbjct: 187 VIFEMLIKAYVKLDLIHESYWSFKKMVKLGFVPNVIACNCILNGLAKMKSDAQCWELYEE 246
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M + V N ++N L + K + +M + +PDV T+ LI +V G
Sbjct: 247 MGRIGVHSNAYTFNILTYVLCRDGDVNKINGFLEKMEEEGFDPDVVTYNTLIDSYVRRGR 306
Query: 284 LEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL 340
LE+A Y + G + + L+ +C G + A L R D
Sbjct: 307 LEDAFYLYKIMYRRGVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVVLYNT 366
Query: 341 VVDRLAKELRVEEAKELVE 359
++ K+ ++EA+ L+
Sbjct: 367 LIGAYCKDGMLQEARSLLH 385
>gi|297841875|ref|XP_002888819.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297334660|gb|EFH65078.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 512
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 154/374 (41%), Gaps = 43/374 (11%)
Query: 20 GPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEI 79
P I V++ + L V FK + + F+ T Y ++ L K+F+ I +
Sbjct: 95 SPALIEEVLKKLSNAGVLALSV--FKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWNL 152
Query: 80 LEHQKQYKDISKEGFTA----------------------------------RLIALYGKA 105
++ KQ K +SK+ F R++ + K+
Sbjct: 153 VDDMKQKKLLSKDTFALISRRYARARKVKEAITAFHKMEDYGFKMESSDFNRMLDILSKS 212
Query: 106 AMFENARKVFDEMPGRNCEQTVLSFNALL---GACVNSKKFDEVDGLFKDLPHKLGIEPD 162
+A+KVFD+M + E + S+ LL G +N + +EV G KD G EPD
Sbjct: 213 RNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVNEVYGEMKDE----GFEPD 268
Query: 163 LVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWE 222
+V+Y II A+ D A EME++ + F +L+ G S + DA + +E
Sbjct: 269 VVAYGIIINAYCKAKKYDEAVRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFE 328
Query: 223 TMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEG 282
+ +YNA + ++ + A + V EMRSK I P+ T+ ++ +
Sbjct: 329 RSKSSGFPLEAPTYNALVGAYCWSQRMEDAFKTVDEMRSKGIGPNARTYDIILHHLIRMQ 388
Query: 283 NLEEAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVV 342
+EA Y K C + ++++V C K LD A + + L ++
Sbjct: 389 RTKEAYEVYQKMSCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLI 448
Query: 343 DRLAKELRVEEAKE 356
L E +++EA E
Sbjct: 449 TALCHENKLDEACE 462
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 115/287 (40%), Gaps = 53/287 (18%)
Query: 36 NLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEI--LEHQKQYKDISKEG 93
+ +++ DK KK RF + YT ++ W +E+ L + Y ++ EG
Sbjct: 217 DAQKVFDKMKKK----RFEPDIKSYTILLEG--------WGQELNLLRVNEVYGEMKDEG 264
Query: 94 FTARLIAL------YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVD 147
F ++A Y KA ++ A + F+EM RNC+ + F +L+ + KK ++
Sbjct: 265 FEPDVVAYGIIINAYCKAKKYDEAVRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDAL 324
Query: 148 GLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGI-----RLDLI--- 199
F + G + +YN ++ A+ ++ A + EM KGI D+I
Sbjct: 325 EFF-ERSKSSGFPLEAPTYNALVGAYCWSQRMEDAFKTVDEMRSKGIGPNARTYDIILHH 383
Query: 200 ------------------------TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRS 235
T+ ++ F + R A KIW+ M V P +
Sbjct: 384 LIRMQRTKEAYEVYQKMSCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHM 443
Query: 236 YNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEG 282
+++ + L E + +A E EM I P F L + ++EG
Sbjct: 444 FSSLITALCHENKLDEACEYFNEMLDVGIRPPGHLFSRLKQTLLDEG 490
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 75/162 (46%), Gaps = 4/162 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+ Y + E+A K DEM + +++ +L + ++ E +++ K+
Sbjct: 345 LVGAYCWSQRMEDAFKTVDEMRSKGIGPNARTYDIILHHLIRMQRTKEAYEVYQ----KM 400
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
EP + +Y +++ F +K LD A + EM+ KG+ + F++L+ + +A
Sbjct: 401 SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEA 460
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
+ + M+++ +RP ++ L E + K +L +M
Sbjct: 461 CEYFNEMLDVGIRPPGHLFSRLKQTLLDEGRKDKVADLAVKM 502
>gi|296084463|emb|CBI25022.3| unnamed protein product [Vitis vinifera]
Length = 927
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 134/265 (50%), Gaps = 4/265 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI LY K A +V M + + +++ L+ V K + +F+D+ K
Sbjct: 449 LINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVV-KD 507
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD+V YN II+AF G++D A + EM+K+ R TF ++ GF +G A
Sbjct: 508 GLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMRRA 567
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+I++ M P V ++NA + GL + Q +KA+E++ EM I+P+ T+ ++ G
Sbjct: 568 LEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIMHG 627
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
+ + G+ +A ++ K G ++ ++ L+ C+ G + A + + S++ +
Sbjct: 628 YASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRN 687
Query: 335 QAPLQLVVDRLAKELRVEEAKELVE 359
+++D A+ V EA EL++
Sbjct: 688 TFVYNILIDGWARRGDVWEAAELMQ 712
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 99/216 (45%), Gaps = 2/216 (0%)
Query: 74 RWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNAL 133
R I + E QK+ + F +I + ++ A ++FD M C TV +FNAL
Sbjct: 531 RAIRTVKEMQKERHRPTTRTFMP-IIHGFARSGDMRRALEIFDMMRWSGCIPTVHTFNAL 589
Query: 134 LGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKG 193
+ V + ++ + ++ GI P+ +Y TI+ + G A +++ +G
Sbjct: 590 ILGLVEKCQMEKAVEILDEMS-LAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEG 648
Query: 194 IRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKAL 253
+ LD+ T+ LL +GR A + M + + N YN +DG A +A
Sbjct: 649 LELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRNTFVYNILIDGWARRGDVWEAA 708
Query: 254 ELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
EL+ +M+ + + PD+ T+ + I G+++ A +
Sbjct: 709 ELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATK 744
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 121/265 (45%), Gaps = 12/265 (4%)
Query: 27 VIRGIYKENNLKR---LVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQ 83
+I G + +++R + D + S + T + G V++ K ++E+
Sbjct: 554 IIHGFARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEM---- 609
Query: 84 KQYKDISKEGFTARLIALYGKAAMFENAR--KVFDEMPGRNCEQTVLSFNALLGACVNSK 141
IS T I ++G A++ + + + F ++ E V ++ ALL AC S
Sbjct: 610 -SLAGISPNEHTYTTI-MHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSG 667
Query: 142 KFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITF 201
+ + +++ + I + YN +I + +G + A L+ +M+++G++ D+ T+
Sbjct: 668 RMQSALAVTREMSSQ-KIPRNTFVYNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTY 726
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS 261
+ + G A K + M + V+PN+++Y + G A +KAL+ EM+S
Sbjct: 727 TSFINACCKAGDMQRATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKS 786
Query: 262 KEINPDVFTFYALIKGFVNEGNLEE 286
+ PD ++ L+ ++ ++ E
Sbjct: 787 AGLKPDKAVYHCLMTSLLSRASVAE 811
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 127/292 (43%), Gaps = 19/292 (6%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++IR N+ R + K+ R R T + + A + R EI + +
Sbjct: 518 NIIRAFCGMGNMDRAIRTVKEMQK-ERHRPTTRTFMPIIHGFARSGDMRRALEIFDMMRW 576
Query: 86 YKDI-SKEGFTARLIALYGKAAMFENARKVFDEM------PGRNCEQTVLSFNALLGACV 138
I + F A ++ L K M E A ++ DEM P + T++ A LG
Sbjct: 577 SGCIPTVHTFNALILGLVEKCQM-EKAVEILDEMSLAGISPNEHTYTTIMHGYASLGD-- 633
Query: 139 NSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL 198
K F+ L + G+E D+ +Y ++KA G + SA + EM + I +
Sbjct: 634 TGKAFEYFTKLKTE-----GLELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRNT 688
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
+N L+ G+ G +A ++ + M V+P++ +Y + ++ ++A + + E
Sbjct: 689 FVYNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATKTIQE 748
Query: 259 MRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLV 307
M + P++ T+ LI G+ E+A + + + +G +KA++ L+
Sbjct: 749 MEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKSAGLKPDKAVYHCLM 800
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 79/171 (46%), Gaps = 9/171 (5%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G P ++SY +I ++ G + A + ME GI+ ++ T++ L+ GF +A+A
Sbjct: 438 GFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANA 497
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++E +V ++P+V YN + +A+ V EM+ + P TF +I G
Sbjct: 498 FAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHG 557
Query: 278 FVNEGNLEEA------KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
F G++ A RW SGC F L+ + EK ++ A +
Sbjct: 558 FARSGDMRRALEIFDMMRW---SGCIPTVHTFNALILGLVEKCQMEKAVEI 605
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/265 (16%), Positives = 116/265 (43%), Gaps = 4/265 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+ + K A E A F E R+ + + ++ A + + + L +++ +
Sbjct: 344 LVGGFAKIADAEAADHWFKEAKERHTTLNAIIYGNIIYAHCQACNMTQAEALVREMEEE- 402
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
GI+ + Y+T++ + G+ + + +++ G +I++ L+ + G+ + A
Sbjct: 403 GIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVISYGCLINLYIKIGKVSKA 462
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ + M ++ N+++Y+ ++G K A + ++ + PDV + +I+
Sbjct: 463 LEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVVKDGLKPDVVLYNNIIRA 522
Query: 278 FVNEGNLEEAKRWYNKSGCGMNKAIFKLLVPFV---CEKGDLDFAFNLCKRTFSERCLVD 334
F GN++ A R + ++ + +P + GD+ A + C+
Sbjct: 523 FCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMRRALEIFDMMRWSGCIPT 582
Query: 335 QAPLQLVVDRLAKELRVEEAKELVE 359
++ L ++ ++E+A E+++
Sbjct: 583 VHTFNALILGLVEKCQMEKAVEILD 607
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 78/188 (41%), Gaps = 22/188 (11%)
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
SK +E + KD L EP+ ++ +++AF E KK R +
Sbjct: 229 SKWHEERESSRKDFRKVLETEPE--NWQAVVQAF--------------ERIKKPSRKE-- 270
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
F ++ + G A +E+M + P Y + + A+ + ++AL V +M
Sbjct: 271 -FGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSCVRKM 329
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS---GCGMNKAIFKLLVPFVCEKGDL 316
+ + I + T+ L+ GF + E A W+ ++ +N I+ ++ C+ ++
Sbjct: 330 KEEGIEMSLVTYSILVGGFAKIADAEAADHWFKEAKERHTTLNAIIYGNIIYAHCQACNM 389
Query: 317 DFAFNLCK 324
A L +
Sbjct: 390 TQAEALVR 397
>gi|308813023|ref|XP_003083818.1| FOG: PPR repeat (ISS) [Ostreococcus tauri]
gi|116055700|emb|CAL57785.1| FOG: PPR repeat (ISS) [Ostreococcus tauri]
Length = 725
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 126/248 (50%), Gaps = 11/248 (4%)
Query: 54 RTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFT-ARLIALYGKAAMFENAR 112
R YT VQ L+ + R +E+L + + +T + LI + +A+ A
Sbjct: 314 RPGVQAYTSLVQGLSRSGRLIEADEVLRRMSR-DGVKPNVYTYSTLIDGFVRASQIGLAE 372
Query: 113 KVFDEMPGRNCEQTVLSFNALL-----GACVNSKKFDEVDGLFKDLPHKL---GIEPDLV 164
+EM + V+++N+LL GA + + DE+ KD+ ++ GI PDLV
Sbjct: 373 TALEEMRRAKIKPNVVTYNSLLKGVLSGAGGPAARTDEMLSRAKDVFERMRADGIPPDLV 432
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNG-RFADAEKIWET 223
SYNT+I A ++ G+ A +L E+ + G+R +++T+ TLL G A + + E
Sbjct: 433 SYNTLIDACINAGAPAEAWNILREISESGLRPNIVTYTTLLKYVVEVGDHSATSWIVAEL 492
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
++ V +V YN ++ A + +A+E + MR+K+I PD+ T+ AL G+V GN
Sbjct: 493 EKDLTVVEDVGVYNCLINAYARQGDMARAMETMETMRAKKIAPDISTYGALTNGYVRVGN 552
Query: 284 LEEAKRWY 291
+ EA Y
Sbjct: 553 VREALSLY 560
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 82/167 (49%), Gaps = 12/167 (7%)
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
P + +Y ++++ G L A+ +L M + G++ ++ T++TL+ GF + AE
Sbjct: 315 PGVQAYTSLVQGLSRSGRLIEADEVLRRMSRDGVKPNVYTYSTLIDGFVRASQIGLAETA 374
Query: 221 WETMVNMNVRPNVRSYNARLDGL---------AIEKQTKKALELVGEMRSKEINPDVFTF 271
E M ++PNV +YN+ L G+ ++ +A ++ MR+ I PD+ ++
Sbjct: 375 LEEMRRAKIKPNVVTYNSLLKGVLSGAGGPAARTDEMLSRAKDVFERMRADGIPPDLVSY 434
Query: 272 YALIKGFVNEGNLEEA---KRWYNKSGCGMNKAIFKLLVPFVCEKGD 315
LI +N G EA R ++SG N + L+ +V E GD
Sbjct: 435 NTLIDACINAGAPAEAWNILREISESGLRPNIVTYTTLLKYVVEVGD 481
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 22/135 (16%)
Query: 177 GSLDSANTLLYEMEKKGIRLDLITFNTLLLG-----------FYSNGRFADAEKIWETMV 225
G+ +A Y+M +G+R FNTL+ G + S R A + V
Sbjct: 246 GAAFAAGVSAYDMTAEGVRAGPRLFNTLIAGLXXXXXXXVFAYVSCDRLDLAMNALDQGV 305
Query: 226 NMNV----RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN- 280
+ RP V++Y + + GL+ + +A E++ M + P+V+T+ LI GFV
Sbjct: 306 RFSPRVERRPGVQAYTSLVQGLSRSGRLIEADEVLRRMSRDGVKPNVYTYSTLIDGFVRA 365
Query: 281 ------EGNLEEAKR 289
E LEE +R
Sbjct: 366 SQIGLAETALEEMRR 380
>gi|414887392|tpg|DAA63406.1| TPA: hypothetical protein ZEAMMB73_124662 [Zea mays]
Length = 795
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 124/263 (47%), Gaps = 4/263 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI+ + + A +VFDEM E ++FN+LL ++K +E G+ K +
Sbjct: 261 LISCCRRRGLHREAAQVFDEMKAAGFEPDKVTFNSLLDVYGKARKHEEAIGVLKRM-ENA 319
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G P +V+YN++I A+V G L+ A L EME +G++ D++T+ TL+ G G+ A
Sbjct: 320 GCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLDRVGKIDAA 379
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ MV PN+ +YNA + + + + + + ++RS PDV T+ L+
Sbjct: 380 LATYSEMVRNGCSPNLCTYNALIKLHGVRGKFTEMMAVFDDLRSAGYVPDVVTWNTLLSV 439
Query: 278 FVNEGNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
F G E + K+G + + L+ G D A + KR D
Sbjct: 440 FGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPD 499
Query: 335 QAPLQLVVDRLAKELRVEEAKEL 357
+ V+ LA+ R E+A++L
Sbjct: 500 ISTYNAVLSALARGGRWEQAEKL 522
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 138/307 (44%), Gaps = 29/307 (9%)
Query: 76 IEEILE--HQKQYKDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNA 132
+EE LE + +++ + + T LI+ + + A + EM C + ++NA
Sbjct: 341 LEEALELKQEMEFRGMKPDVVTYTTLISGLDRVGKIDAALATYSEMVRNGCSPNLCTYNA 400
Query: 133 LLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKK 192
L+ KF E+ +F DL G PD+V++NT++ F G + + EM+K
Sbjct: 401 LIKLHGVRGKFTEMMAVFDDL-RSAGYVPDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKA 459
Query: 193 GIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKA 252
G + T+ +L+ + G F A +I++ M+ + P++ +YNA L LA + ++A
Sbjct: 460 GYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQA 519
Query: 253 LELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK--------------RWYNKSGCGM 298
+L EM ++ PD ++ +L+ + N L++ K W K+ +
Sbjct: 520 EKLFAEMVDRDCKPDELSYSSLLHAYANAKKLDKMKTLSEDIYAERIERHNWLVKTLVLV 579
Query: 299 NKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
N + L + + AF +R RC +D L +V K V++ +E++
Sbjct: 580 NNKVNNL--------PETEKAFQELRR---RRCSLDINVLNAMVSIYGKNKMVKKVEEVL 628
Query: 359 ELGKTNS 365
L NS
Sbjct: 629 SLMMENS 635
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 104/219 (47%), Gaps = 6/219 (2%)
Query: 93 GFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN-SKKFDEVDGLFK 151
+TA L++ + +A F +A VF M + ++++N + A S + EV L
Sbjct: 186 AYTA-LVSAFSRAGRFRDAVAVFQRMVDGGVQPALVTYNVVFHAYSKMSVPWKEVVALVD 244
Query: 152 DLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSN 211
+ GIE D +YNT+I +G A + EM+ G D +TFN+LL +
Sbjct: 245 SMKED-GIERDRYTYNTLISCCRRRGLHREAAQVFDEMKAAGFEPDKVTFNSLLDVYGKA 303
Query: 212 GRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTF 271
+ +A + + M N P+V +YN+ + + ++ALEL EM + + PDV T+
Sbjct: 304 RKHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTY 363
Query: 272 YALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLV 307
LI G G ++ A Y+ ++GC N + L+
Sbjct: 364 TTLISGLDRVGKIDAALATYSEMVRNGCSPNLCTYNALI 402
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 76/145 (52%), Gaps = 1/145 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
++++YGK M + +V M + + ++N+L+ ++ + + ++
Sbjct: 611 MVSIYGKNKMVKKVEEVLSLMMENSINHSAATYNSLMHMYSRLGDCEKCESILTEIKSS- 669
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ PD SYNT+I A+ KG + A+ L EM+ G++ D++T+N + + +N F +A
Sbjct: 670 GMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKSYVANIMFEEA 729
Query: 218 EKIWETMVNMNVRPNVRSYNARLDG 242
+ +V RPN R++N+ L G
Sbjct: 730 IDLVRYLVTQGCRPNERTFNSILQG 754
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 131/280 (46%), Gaps = 15/280 (5%)
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
Y DIS + A L AL + +E A K+F EM R+C+ LS+++LL A N+KK D+
Sbjct: 497 YPDIST--YNAVLSAL-ARGGRWEQAEKLFAEMVDRDCKPDELSYSSLLHAYANAKKLDK 553
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFV----DKGSLDSANTLLYEMEKKGIRLDLITF 201
+ L +D+ + IE +N ++K V +L E+ ++ LD+
Sbjct: 554 MKTLSEDI-YAERIE----RHNWLVKTLVLVNNKVNNLPETEKAFQELRRRRCSLDINVL 608
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS 261
N ++ + N E++ M+ ++ + +YN+ + + +K ++ E++S
Sbjct: 609 NAMVSIYGKNKMVKKVEEVLSLMMENSINHSAATYNSLMHMYSRLGDCEKCESILTEIKS 668
Query: 262 KEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDF 318
+ PD +++ +I + +G ++EA R +++ SG + + + + +
Sbjct: 669 SGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKSYVANIMFEE 728
Query: 319 AFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
A +L + ++ C ++ ++ ++ R+ EAK +
Sbjct: 729 AIDLVRYLVTQGCRPNERTFNSILQGYSRHGRMVEAKSFL 768
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 106/231 (45%), Gaps = 1/231 (0%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMP 119
Y+ + ANAK+ ++ + E + L+ + K K F E+
Sbjct: 538 YSSLLHAYANAKKLDKMKTLSEDIYAERIERHNWLVKTLVLVNNKVNNLPETEKAFQELR 597
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL 179
R C + NA++ +K +V+ + L + I +YN+++ + G
Sbjct: 598 RRRCSLDINVLNAMVSIYGKNKMVKKVEEVL-SLMMENSINHSAATYNSLMHMYSRLGDC 656
Query: 180 DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNAR 239
+ ++L E++ G+R D ++NT++ + G+ +A +++ M V+P++ +YN
Sbjct: 657 EKCESILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIF 716
Query: 240 LDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
+ ++A++LV + ++ P+ TF ++++G+ G + EAK +
Sbjct: 717 IKSYVANIMFEEAIDLVRYLVTQGCRPNERTFNSILQGYSRHGRMVEAKSF 767
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 82/194 (42%), Gaps = 8/194 (4%)
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
T I+ F G L A+ +L + D + L+ F GRF DA +++ MV+
Sbjct: 158 TAIRVFARAGCLAEASAIL----EAAPAPDASAYTALVSAFSRAGRFRDAVAVFQRMVDG 213
Query: 228 NVRPNVRSYNARLDGLA-IEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEE 286
V+P + +YN + + K+ + LV M+ I D +T+ LI G E
Sbjct: 214 GVQPALVTYNVVFHAYSKMSVPWKEVVALVDSMKEDGIERDRYTYNTLISCCRRRGLHRE 273
Query: 287 AKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVD 343
A + +++ +G +K F L+ + + A + KR + C ++
Sbjct: 274 AAQVFDEMKAAGFEPDKVTFNSLLDVYGKARKHEEAIGVLKRMENAGCTPSVVTYNSLIS 333
Query: 344 RLAKELRVEEAKEL 357
K+ +EEA EL
Sbjct: 334 AYVKDGLLEEALEL 347
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 34/163 (20%), Positives = 64/163 (39%), Gaps = 36/163 (22%)
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI--------------------- 199
PD +Y ++ AF G A + M G++ L+
Sbjct: 182 PDASAYTALVSAFSRAGRFRDAVAVFQRMVDGGVQPALVTYNVVFHAYSKMSVPWKEVVA 241
Query: 200 ---------------TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLA 244
T+NTL+ G +A ++++ M P+ ++N+ LD
Sbjct: 242 LVDSMKEDGIERDRYTYNTLISCCRRRGLHREAAQVFDEMKAAGFEPDKVTFNSLLDVYG 301
Query: 245 IEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
++ ++A+ ++ M + P V T+ +LI +V +G LEEA
Sbjct: 302 KARKHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEA 344
>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
Length = 797
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 115/245 (46%), Gaps = 5/245 (2%)
Query: 118 MPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLG--IEPDLVSYNTIIKAFVD 175
MP C V+S+N LL N K+ +E L + G P++VSY +I F
Sbjct: 156 MPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVINGFFT 215
Query: 176 KGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRS 235
+G +D A L EM +GI+ +++T+ T++ G AE +++ M++ V+P+ +
Sbjct: 216 EGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDT 275
Query: 236 YNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN--- 292
YN + G + K+ + ++ EM + + PD +T+ +L+ N G EA+ ++
Sbjct: 276 YNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMI 335
Query: 293 KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVE 352
+ G N AI+ +L+ KG L +L D ++ AK+ ++
Sbjct: 336 RKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMID 395
Query: 353 EAKEL 357
EA +
Sbjct: 396 EAMHI 400
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 104/214 (48%), Gaps = 4/214 (1%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
+ A +F EM R + V+++ ++ ++ D +G+F+ + K G++PD +YN
Sbjct: 220 DKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDK-GVKPDNDTYNC 278
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
+I ++ G +L EM G++ D T+ +LL +NGR +A ++++M+
Sbjct: 279 LIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKG 338
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
++PNV Y + G A + + +L+ M ++PD F + + + ++EA
Sbjct: 339 IKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAM 398
Query: 289 RWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFA 319
+NK G + + L+ +C+ G +D A
Sbjct: 399 HIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDA 432
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 121/263 (46%), Gaps = 4/263 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI K ++A F++M + FN+L+ K+++ + ++ ++
Sbjct: 419 LIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQ- 477
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
GI PD+V +NTI+ KG + A L+ ME+ G R +I++ TL+ G GR +A
Sbjct: 478 GIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEA 537
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
K + M+++ ++P+ +YN L G + A + EM I P V T+ ++ G
Sbjct: 538 AKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHG 597
Query: 278 FVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
EAK Y SG N I+ +++ + + +D AF L + S+ ++
Sbjct: 598 LFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLE 657
Query: 335 QAPLQLVVDRLAKELRVEEAKEL 357
+++ L K R E+A L
Sbjct: 658 ITTFNIMIGALFKSGRNEDAMHL 680
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 127/294 (43%), Gaps = 7/294 (2%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
VI G + E + + + F + D G + N YT + L A+ E + + Q
Sbjct: 209 VINGFFTEGQVDKAYNLFLEMMDRG-IQPNVVTYTTVIDGLCKAQVVDRAEGVFQ-QMID 266
Query: 87 KDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
K + + T LI Y ++ ++ +EM + ++ +LL N+ + E
Sbjct: 267 KGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCRE 326
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
LF + K GI+P++ Y +I + KG+L + LL M + G+ D FN +
Sbjct: 327 ARFLFDSMIRK-GIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIF 385
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEIN 265
+ +A I+ M + P+V +Y A +D L + A+ +M ++ +
Sbjct: 386 TAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVA 445
Query: 266 PDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDL 316
P++F F +L+ G E+AK +Y + G + F ++ +C KG +
Sbjct: 446 PNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQV 499
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 113/253 (44%), Gaps = 40/253 (15%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A+++ D M V+S+ L+G + DE D+ +G++PD +YNT++
Sbjct: 502 AQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSL-DVMLSVGLKPDEWTYNTLL 560
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
+ G +D A + EM + GI ++T++T+L G ++ RF++A++++ M+ +
Sbjct: 561 HGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQ 620
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEIN------------------------- 265
N+ YN L+GL+ +A +L + SK+
Sbjct: 621 WNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHL 680
Query: 266 ----------PDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCE 312
PDVFT+ + + + EG LEE ++ KSG N + LV +
Sbjct: 681 FATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLH 740
Query: 313 KGDLDFA-FNLCK 324
+GD+ A LCK
Sbjct: 741 RGDITRAGAYLCK 753
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 101/231 (43%), Gaps = 4/231 (1%)
Query: 130 FNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEM 189
FN + A DE +F + + G+ PD+V+Y +I A G +D A +M
Sbjct: 381 FNIIFTAYAKKAMIDEAMHIFNKMKQQ-GLSPDVVNYGALIDALCKLGRVDDAVLKFNQM 439
Query: 190 EKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQT 249
+G+ ++ FN+L+ G + ++ A++ + M+N +RP+V +N L L + Q
Sbjct: 440 MNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQV 499
Query: 250 KKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLL 306
KA L+ M P V ++ LI G G ++EA + + G ++ + L
Sbjct: 500 MKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTL 559
Query: 307 VPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
+ C G +D A+ + + ++ L R EAKEL
Sbjct: 560 LHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKEL 610
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 118/265 (44%), Gaps = 4/265 (1%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
+VI G+ K + R F++ D G + + Y + + +++ + +LE
Sbjct: 243 TVIDGLCKAQVVDRAEGVFQQMIDKG-VKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSA 301
Query: 86 YKDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
+ + + +T L+ AR +FD M + + V + L+
Sbjct: 302 H-GLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALS 360
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
E+ L +L + G+ PD +N I A+ K +D A + +M+++G+ D++ + L
Sbjct: 361 EMHDLL-NLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGAL 419
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+ GR DA + M+N V PN+ +N+ + GL + +KA E EM ++ I
Sbjct: 420 IDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGI 479
Query: 265 NPDVFTFYALIKGFVNEGNLEEAKR 289
PDV F ++ +G + +A+R
Sbjct: 480 RPDVVFFNTILCNLCTKGQVMKAQR 504
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 93/193 (48%), Gaps = 13/193 (6%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACV-------NSKKFDEVDGLFKDLPHKLGIE 160
++A K+FD + +V++FN LL A ++ + + V LF + + I+
Sbjct: 30 LDDALKLFDGLLTHARPASVIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECTIK 89
Query: 161 --PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAE 218
PD +Y+ +I F G L+ + K G R++ I N LL G R +A
Sbjct: 90 VTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAM 149
Query: 219 KIW-ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM---RSKEINPDVFTFYAL 274
I + M + P+V SYN L G EK+ ++ALEL+ M + + P+V ++ +
Sbjct: 150 DILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIV 209
Query: 275 IKGFVNEGNLEEA 287
I GF EG +++A
Sbjct: 210 INGFFTEGQVDKA 222
>gi|255660820|gb|ACU25579.1| pentatricopeptide repeat-containing protein [Mulguraea
asparagoides]
Length = 418
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 140/313 (44%), Gaps = 4/313 (1%)
Query: 5 SRLLSCSFSTTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTV 64
S + + T T ++ S + Y E+ R + + + +FR +
Sbjct: 49 SAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVI 108
Query: 65 QRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCE 124
+ L K F+ + E + + F L+ + K A+ VFD +
Sbjct: 109 EHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHNFCKEGEIRLAQSVFDSITKWGLR 168
Query: 125 QTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANT 184
+V+SFN L+ + DE L K + G++PD+ +++ +I + +D AN
Sbjct: 169 PSVVSFNTLMNGYIKIGDLDEGFRL-KSVMQASGVQPDVYTHSVLINGLCKESKMDDANE 227
Query: 185 LLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLA 244
L EM G+ + +TF TL+ G NGR A +I+ M++ ++ P++ +YN + GL
Sbjct: 228 LFDEMLBNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLC 287
Query: 245 IEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA---KRWYNKSGCGMNKA 301
+ K+ +L+ EM K + PD T+ LI G EG+LE A ++ K ++
Sbjct: 288 KKGDLKQXXDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDX 347
Query: 302 IFKLLVPFVCEKG 314
+ L+ +C++G
Sbjct: 348 AYTALISGLCQEG 360
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 93/181 (51%), Gaps = 1/181 (0%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K + ++A ++FDEM ++F L+ + + D +++ + + + PDL
Sbjct: 218 KESKMDDANELFDEMLBNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYRQMLSQ-SLLPDL 276
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
++YNT+I KG L L+ EM KG++ D IT+ TL+ G G A + +
Sbjct: 277 ITYNTLIYGLCKKGDLKQXXDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKR 336
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M+ N+R + +Y A + GL E ++ A +++ EM S + P++ T+ +I F +G+
Sbjct: 337 MIKENIRLDDXAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGD 396
Query: 284 L 284
+
Sbjct: 397 V 397
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 106/248 (42%), Gaps = 10/248 (4%)
Query: 78 EILEHQKQYKDISKEGFTARLIAL------YGKAAMFENARKVFDEMPGRNCEQTVLSFN 131
EI Q + I+K G +++ Y K + ++ M + V + +
Sbjct: 151 EIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVQPDVYTHS 210
Query: 132 ALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEK 191
L+ K D+ + LF ++ G+ P+ V++ T+I G +D A + +M
Sbjct: 211 VLINGLCKESKMDDANELFDEMLBN-GLVPNGVTFTTLIDGHCKNGRVDLAMEIYRQMLS 269
Query: 192 KGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKK 251
+ + DLIT+NTL+ G G + + M ++P+ +Y +DG E +
Sbjct: 270 QSLLPDLITYNTLIYGLCKKGDLKQXXDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLET 329
Query: 252 ALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS-GCGMNKAI--FKLLVP 308
A E M + I D + ALI G EG +A++ + G+ I + +++
Sbjct: 330 AFEYRKRMIKENIRLDDXAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIIN 389
Query: 309 FVCEKGDL 316
C+KGD+
Sbjct: 390 EFCKKGDV 397
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 82/173 (47%), Gaps = 1/173 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K + A +++ +M ++ ++++N L+ + L ++ K
Sbjct: 247 LIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQXXDLIDEMSMK- 305
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD ++Y T+I +G L++A M K+ IRLD + L+ G GR DA
Sbjct: 306 GLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDXAYTALISGLCQEGRSVDA 365
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
EK+ M+++ ++P + +Y ++ + +L+ EM+ P+ T
Sbjct: 366 EKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRXGYXPNXVT 418
>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
Length = 735
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 129/296 (43%), Gaps = 39/296 (13%)
Query: 102 YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEP 161
Y +A M +A +VF MP R C +T ++ ALL + + E +F + P
Sbjct: 117 YCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRAD-SCAP 175
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
D Y T++ + G + A LL E G +++ +N L+ G+ + G A K++
Sbjct: 176 DTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVF 235
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
E M PNVR+Y + GL + ++A+ L M + P+V T+ ALI+G NE
Sbjct: 236 EGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNE 295
Query: 282 GNLEEAKRWYN--------------------------------------KSGCGMNKAIF 303
G+L+ A R + K G +N+ ++
Sbjct: 296 GHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVY 355
Query: 304 KLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
L+ +C+ G +D A L ++ SE + D ++D L ++ ++ +A ++E
Sbjct: 356 TSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLE 411
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 117/260 (45%), Gaps = 39/260 (15%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI Y A E+A KVF+ M G C V ++ L+ S K + LF +
Sbjct: 218 LIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEA- 276
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEME--------------------------- 190
G+EP++V+Y +I+ ++G L A LL+ ME
Sbjct: 277 GLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEA 336
Query: 191 --------KKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDG 242
KKG++++ + + +L+ G G+ A+++ + M++ P+ SY++ +DG
Sbjct: 337 QLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDG 396
Query: 243 LAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS-GCGMNKA 301
L +K+ +A ++ +M K I T+ +I V E E K+ ++K G+N
Sbjct: 397 LCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPD 456
Query: 302 I--FKLLVPFVCEKGDLDFA 319
I + + V CE+G ++ A
Sbjct: 457 IVTYTVFVRSYCEEGRMEDA 476
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 95/231 (41%), Gaps = 8/231 (3%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+ + MF + + MP RN + ++ L+ A + L H
Sbjct: 47 LLMALARHRMFPDMESLASRMPARN----LRTYTTLINAYCLAGDIPAAKQHLTSLLHA- 101
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ PD +Y + + + G L A + M +G T+ LL G G +A
Sbjct: 102 GLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREA 161
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ M + P+ Y + GL +T++A L+ E S P++ + ALI G
Sbjct: 162 MAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDG 221
Query: 278 FVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKR 325
+ N G +E A + + + + C N + L+ +C+ G ++ A L R
Sbjct: 222 YCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSR 272
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/252 (18%), Positives = 113/252 (44%), Gaps = 17/252 (6%)
Query: 54 RTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARK 113
+ N +YT + L + +E+++ + + LI + A
Sbjct: 349 KVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATL 408
Query: 114 VFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAF 173
+ ++M + + + +++ ++ V + +F + GI PD+V+Y ++++
Sbjct: 409 MLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMI-ATGINPDIVTYTVFVRSY 467
Query: 174 VDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNV 233
++G ++ A +++ +M +G+ +L+T+NTL+ G+ + G + A +E MV +PN
Sbjct: 468 CEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNE 527
Query: 234 RSYNARLDGLAIEKQTKKALEL--VGEM------------RSKEINPDVFTFYALIKGFV 279
SY L + + + ++++ + +M R + D+++ + I+
Sbjct: 528 DSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCF--IRCLC 585
Query: 280 NEGNLEEAKRWY 291
LEEAK ++
Sbjct: 586 RVDRLEEAKHFF 597
>gi|255660936|gb|ACU25637.1| pentatricopeptide repeat-containing protein [Citharexylum
ligustrinum]
Length = 484
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 128/285 (44%), Gaps = 34/285 (11%)
Query: 73 FRWIEE--ILEHQKQYK---------------------DISKEGFT------ARLIALYG 103
FRW+E + EH ++ D+ K+G +I YG
Sbjct: 32 FRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDLWVLMIDSYG 91
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
KA + + + K+F +M E+T+ S++ L + ++ F + + GIEP
Sbjct: 92 KAGIVQESVKLFQKMEELGVERTIKSYDVLFKVILRRGRYMMAKRYFNKMLSE-GIEPTR 150
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
++N +I F G +++AN +M+ + I D+IT+NT++ G+Y + +AEK +
Sbjct: 151 HTFNIMIWGFFLSGKVETANRFFEDMKSRXITPDVITYNTMINGYYRVKKMEEAEKYFVE 210
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M N+ P V + + G + AL L EM+ I P+ T+ L+ G N
Sbjct: 211 MKGRNIEPTVVTXTTLIKGYVSVDRVDDALRLXEEMKGFGIKPNAITYSTLLPGLCNAEK 270
Query: 284 LEEA----KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCK 324
+ EA K +K + +IF L+ C+ G+LD A ++ +
Sbjct: 271 MSEARSXLKEMVDKYIAPTDNSIFLRLISGQCKAGNLDAAADVLQ 315
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 97/234 (41%), Gaps = 46/234 (19%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I Y + E A K F EM GRN E TV++ L+ V+ + D+ L +++
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTXTTLIKGYVSVDRVDDALRLXEEMK-GF 249
Query: 158 GIEPDLVSYNTII----------------KAFVDK--------------------GSLDS 181
GI+P+ ++Y+T++ K VDK G+LD+
Sbjct: 250 GIKPNAITYSTLLPGLCNAEKMSEARSXLKEMVDKYIAPTDNSIFLRLISGQCKAGNLDA 309
Query: 182 ANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV--RPNVR----- 234
A +L M + + + + L+ + G++ A + + ++ ++ RP
Sbjct: 310 AADVLQAMIRLSVPTEAGHYGVLIENYCKAGQYDKAINLLDKLIEKDIILRPQSTLHMEX 369
Query: 235 -SYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+YN ++ L +T KA LV ++ + D LI G EG+ + A
Sbjct: 370 IAYNPLIEYLCNNGRTAKAETLVRQLMKLGVQ-DSIALNTLILGHSQEGSPDSA 422
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 93/215 (43%), Gaps = 17/215 (7%)
Query: 37 LKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTA 96
LK +VDK+ +D I+ + A ++L+ + ++ G
Sbjct: 278 LKEMVDKYIAPTD-------NSIFLRLISGQCKAGNLDAAADVLQAMIRLSVPTEAGHYG 330
Query: 97 RLIALYGKAAMFENARKVFDEM--------PGRNCEQTVLSFNALLGACVNSKKFDEVDG 148
LI Y KA ++ A + D++ P +++N L+ N+ + + +
Sbjct: 331 VLIENYCKAGQYDKAINLLDKLIEKDIILRPQSTLHMEXIAYNPLIEYLCNNGRTAKAET 390
Query: 149 LFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
L + L KLG++ D ++ NT+I +GS DSA LL M ++ I +++L+ +
Sbjct: 391 LVRQL-MKLGVQ-DSIALNTLILGHSQEGSPDSAFELLKIMLRRKIDSAKSAYDSLVQSY 448
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
ADA+ ++M+ P+ + + ++ L
Sbjct: 449 LKKNEPADAKAALDSMIENGHLPDSSLFRSVMESL 483
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/199 (20%), Positives = 80/199 (40%), Gaps = 39/199 (19%)
Query: 128 LSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLY 187
L +N L G SKK + F+ + E + ++ II+ L+ A +L
Sbjct: 14 LVYNVLHG----SKKSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 188 EMEKKGIRLD-----------------------------------LITFNTLLLGFYSNG 212
+M KKG+ D + +++ L G
Sbjct: 70 DMPKKGLEWDEDLWVLMIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDVLFKVILRRG 129
Query: 213 RFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFY 272
R+ A++ + M++ + P ++N + G + + + A +M+S+ I PDV T+
Sbjct: 130 RYMMAKRYFNKMLSEGIEPTRHTFNIMIWGFFLSGKVETANRFFEDMKSRXITPDVITYN 189
Query: 273 ALIKGFVNEGNLEEAKRWY 291
+I G+ +EEA++++
Sbjct: 190 TMINGYYRVKKMEEAEKYF 208
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 89/213 (41%), Gaps = 11/213 (5%)
Query: 36 NLKRLVDKFKKSSDLGRF--RTNTGIYTGTVQRLANAKRFRWIEEIL-EHQKQYKDISKE 92
++ R+ D + ++ F + N Y+ + L NA++ L E +Y +
Sbjct: 232 SVDRVDDALRLXEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARSXLKEMVDKYIAPTDN 291
Query: 93 GFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKD 152
RLI+ KA + A V M + + L+ + ++D+ L
Sbjct: 292 SIFLRLISGQCKAGNLDAAADVLQAMIRLSVPTEAGHYGVLIENYCKAGQYDKAINLLDK 351
Query: 153 LPHK-LGIEP------DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
L K + + P + ++YN +I+ + G A TL+ ++ K G++ D I NTL+
Sbjct: 352 LIEKDIILRPQSTLHMEXIAYNPLIEYLCNNGRTAKAETLVRQLMKLGVQ-DSIALNTLI 410
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNA 238
LG G A ++ + M+ + +Y++
Sbjct: 411 LGHSQEGSPDSAFELLKIMLRRKIDSAKSAYDS 443
>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
Length = 621
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 129/296 (43%), Gaps = 39/296 (13%)
Query: 102 YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEP 161
Y +A M +A +VF MP R C +T ++ ALL + + E +F + P
Sbjct: 117 YCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRAD-SCAP 175
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
D Y T++ + G + A LL E G +++ +N L+ G+ + G A K++
Sbjct: 176 DTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVF 235
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
E M PNVR+Y + GL + ++A+ L M + P+V T+ ALI+G NE
Sbjct: 236 EGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNE 295
Query: 282 GNLEEAKRWYN--------------------------------------KSGCGMNKAIF 303
G+L+ A R + K G +N+ ++
Sbjct: 296 GHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVY 355
Query: 304 KLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
L+ +C+ G +D A L ++ SE + D ++D L ++ ++ +A ++E
Sbjct: 356 TSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLE 411
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 117/260 (45%), Gaps = 39/260 (15%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI Y A E+A KVF+ M G C V ++ L+ S K + LF +
Sbjct: 218 LIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEA- 276
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEME--------------------------- 190
G+EP++V+Y +I+ ++G L A LL+ ME
Sbjct: 277 GLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEA 336
Query: 191 --------KKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDG 242
KKG++++ + + +L+ G G+ A+++ + M++ P+ SY++ +DG
Sbjct: 337 QLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDG 396
Query: 243 LAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS-GCGMNKA 301
L +K+ +A ++ +M K I T+ +I V E E K+ ++K G+N
Sbjct: 397 LCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPD 456
Query: 302 I--FKLLVPFVCEKGDLDFA 319
I + + V CE+G ++ A
Sbjct: 457 IVTYTVFVRSYCEEGRMEDA 476
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/236 (19%), Positives = 112/236 (47%), Gaps = 4/236 (1%)
Query: 54 RTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARK 113
+ N +YT + L + +E+++ + + LI + A
Sbjct: 349 KVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATL 408
Query: 114 VFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAF 173
+ ++M + + + +++ ++ V + +F + GI PD+V+Y ++++
Sbjct: 409 MLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMI-ATGINPDIVTYTVFVRSY 467
Query: 174 VDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNV 233
++G ++ A +++ +M +G+ +L+T+NTL+ G+ + G + A +E MV +PN
Sbjct: 468 CEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNE 527
Query: 234 RSYNARLDGLAIEKQTKKALEL--VGEMRS-KEINPDVFTFYALIKGFVNEGNLEE 286
SY L + + + ++++ + +M+ +E N D + LI G + +G++ E
Sbjct: 528 DSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQESNYDEIVWKILIYGLLQKGSVAE 583
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 94/231 (40%), Gaps = 8/231 (3%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+ + MF + + MP RN ++ L+ A + L H
Sbjct: 47 LLMALARHRMFPDMESLASRMPARNLR----TYTTLINAYCLAGDIPAAKQHLTSLLHA- 101
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ PD +Y + + + G L A + M +G T+ LL G G +A
Sbjct: 102 GLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREA 161
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ M + P+ Y + GL +T++A L+ E S P++ + ALI G
Sbjct: 162 MAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDG 221
Query: 278 FVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKR 325
+ N G +E A + + + + C N + L+ +C+ G ++ A L R
Sbjct: 222 YCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSR 272
>gi|357447159|ref|XP_003593855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482903|gb|AES64106.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 790
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 136/303 (44%), Gaps = 5/303 (1%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTAR-LIALYGKAAMFENARKVFDEM 118
Y + L ++ ++ ++E+ Q ++ + T LI K ++A E
Sbjct: 340 YYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDALVFLREA 399
Query: 119 PGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGS 178
+ + ++A++ + +K D+ L D+ K G PD+V+Y II F G
Sbjct: 400 EEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSK-GCNPDVVTYTAIIDGFCRVGK 458
Query: 179 LDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNA 238
+D A +L +M K G + + +T+ LL G NG+ +A ++ PN +Y+A
Sbjct: 459 IDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSA 518
Query: 239 RLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS---G 295
+ GL E + +A +L EM K P+ LI+ N+ AK++ + G
Sbjct: 519 VMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHKG 578
Query: 296 CGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAK 355
C +N F ++ C+ GDLD A ++ + + D + D L K+ R++EA
Sbjct: 579 CAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDALGKKSRLDEAS 638
Query: 356 ELV 358
EL+
Sbjct: 639 ELI 641
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 123/266 (46%), Gaps = 5/266 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
++ + K + + AR++ M R E++ +F+ ++ + + + L K
Sbjct: 203 MLDILSKTRLCQGARRILRLMTRRGIERSPEAFSYVMVSYSRAGMLRNALRILT-LMQKA 261
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+EPDL NT I V L+ A L M+ GI D++++N L+ G+ R DA
Sbjct: 262 GVEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKGYCDVHRIDDA 321
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM-RSKEINPDVFTFYALIK 276
++ M P+ SY + L +++ ++ L+ M ++ + PD T+ LI
Sbjct: 322 LELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIY 381
Query: 277 GFVNEGNLEEA---KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV 333
G+ ++A R + G ++K + +V C+ ++D A +L +S+ C
Sbjct: 382 ALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNP 441
Query: 334 DQAPLQLVVDRLAKELRVEEAKELVE 359
D ++D + +++EAK++++
Sbjct: 442 DVVTYTAIIDGFCRVGKIDEAKKMLQ 467
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 113/267 (42%), Gaps = 15/267 (5%)
Query: 40 LVDKFKKSSDLGRFRT------NTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEG 93
+VD F K+ ++ + ++ + G V A F + +I E +K + + K G
Sbjct: 414 VVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHG 473
Query: 94 -------FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEV 146
+T L L E AR++ + ++++A++ K E
Sbjct: 474 CKPNTVTYTVLLNGLCHNGKSLE-AREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEA 532
Query: 147 DGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLL 206
L +++ K G P+ V N +I++ ++ A L E KG ++++ F +++
Sbjct: 533 CDLTREMIEK-GFLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIY 591
Query: 207 GFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINP 266
GF G A + E M N P+ +Y D L + + +A EL+ +M K I+P
Sbjct: 592 GFCQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDALGKKSRLDEASELIVKMLGKGIDP 651
Query: 267 DVFTFYALIKGFVNEGNLEEAKRWYNK 293
T+ A+I F G +++ + K
Sbjct: 652 TPVTYRAVIHRFCQWGRVDDMMKLLEK 678
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 81/173 (46%), Gaps = 3/173 (1%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A+K +E + C V++F +++ D + +D+ + PD ++Y T+
Sbjct: 567 AKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDM-YLSNKHPDAITYTTLF 625
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
A K LD A+ L+ +M KGI +T+ ++ F GR D K+ E M+ +
Sbjct: 626 DALGKKSRLDEASELIVKMLGKGIDPTPVTYRAVIHRFCQWGRVDDMMKLLEKMIAR--Q 683
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
P YN ++ L ++A +L+G++ D T + LI+ ++ +GN
Sbjct: 684 PFKTVYNQVIEKLCYFGNREEAEKLLGKVLRTASKLDAKTCHILIESYLIDGN 736
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 85/197 (43%), Gaps = 4/197 (2%)
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
D + Y T++ A +L M ++GI F+ +++ + G +A +I
Sbjct: 196 DAIVYYTMLDILSKTRLCQGARRILRLMTRRGIERSPEAFSYVMVSYSRAGMLRNALRIL 255
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
M V P++ N + L + +KAL + M+ I PD+ ++ LIKG+ +
Sbjct: 256 TLMQKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKGYCDV 315
Query: 282 GNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV-DQAP 337
+++A + GC +K + ++ F+C+ ++ L + L+ DQ
Sbjct: 316 HRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVT 375
Query: 338 LQLVVDRLAKELRVEEA 354
++ L+K ++A
Sbjct: 376 YNTLIYALSKHGHADDA 392
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 69/149 (46%), Gaps = 8/149 (5%)
Query: 103 GKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPD 162
GK + + A ++ +M G+ + T +++ A++ ++ VD + K L + +P
Sbjct: 629 GKKSRLDEASELIVKMLGKGIDPTPVTYRAVIHRFC---QWGRVDDMMKLLEKMIARQPF 685
Query: 163 LVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWE 222
YN +I+ G+ + A LL ++ + +LD T + L+ + +G A K+
Sbjct: 686 KTVYNQVIEKLCYFGNREEAEKLLGKVLRTASKLDAKTCHILIESYLIDGNALSAYKVAC 745
Query: 223 TMVNMNVRPNVR-----SYNARLDGLAIE 246
M N+ P+++ + LDG+ E
Sbjct: 746 QMFRRNLIPDLKLCEKVTKKLVLDGMPAE 774
>gi|299471515|emb|CBN80001.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 687
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 100/189 (52%), Gaps = 1/189 (0%)
Query: 99 IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLG 158
I G++A ++ A +F EMP R V+++N+++ AC ++++ L +P + G
Sbjct: 469 IEACGRSARWQEAMGLFREMPTRGLSPNVVTYNSMIDACAKGEQWELAVQLLTGMPAR-G 527
Query: 159 IEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAE 218
+ PD++SYN+ I+A + A LL M +G + D+I++N+ + +GR+ +A
Sbjct: 528 VAPDVISYNSAIEACGKGEQWELALQLLKGMPTRGPKPDIISYNSAVTACAKSGRWREAL 587
Query: 219 KIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGF 278
+ + M + + PN SY A + +Q A+ ++ EM++ P++ T+ A I
Sbjct: 588 GLLKDMATVGLTPNTVSYGAAIHACGKGEQWDVAVRILKEMQTHGATPNLITYSAAIDAC 647
Query: 279 VNEGNLEEA 287
+G +EA
Sbjct: 648 AKQGRWKEA 656
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 127/266 (47%), Gaps = 10/266 (3%)
Query: 24 IGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEI-LEH 82
IG+ +G E + L + ++ F +T Y + A AK RW+E + L
Sbjct: 224 IGACAKGRRWEEAMDLLEEVIEQG-----FPPSTRTYNPVID--ACAKGGRWLEAMDLLG 276
Query: 83 QKQYKDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSK 141
Q DI + + + +IA G+ ++ A + ++M + V+S+N+ + AC
Sbjct: 277 QMLTNDIPADVISYSSVIAACGRGRRWKEAMDLLEQMRTQGVSPNVISYNSAIDACAKGD 336
Query: 142 KFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITF 201
++ E L +++ +G+ P ++SYN+ A G A LL EM +GI + I++
Sbjct: 337 RWKEALDLLREM-TTVGLVPTVISYNSATAACAVNGRWVEALELLKEMPAQGIAPNTISY 395
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS 261
N+ L G++ A K+ M + P++ S+N+ +D +Q + A+EL+ EM +
Sbjct: 396 NSALDACAKGGQWEKAVKLLRGMSTVGSDPDIISFNSAIDACGRGQQWETAVELLREMPT 455
Query: 262 KEINPDVFTFYALIKGFVNEGNLEEA 287
+ P+V T+ + I+ +EA
Sbjct: 456 AGLTPNVITYNSAIEACGRSARWQEA 481
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 147/336 (43%), Gaps = 30/336 (8%)
Query: 42 DKFKKSSDLGRFRTNTGIYTGTVQ----RLANAKRFRWIEEILEHQKQYKDISKEGFTAR 97
D++K++ DL R T G+ + A A RW+E + + K++ +G
Sbjct: 336 DRWKEALDLLREMTTVGLVPTVISYNSATAACAVNGRWVEAL----ELLKEMPAQGIAPN 391
Query: 98 LIA------LYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFK 151
I+ K +E A K+ M + ++SFN+ + AC ++++ L +
Sbjct: 392 TISYNSALDACAKGGQWEKAVKLLRGMSTVGSDPDIISFNSAIDACGRGQQWETAVELLR 451
Query: 152 DLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSN 211
++P G+ P++++YN+ I+A A L EM +G+ +++T+N+++
Sbjct: 452 EMPTA-GLTPNVITYNSAIEACGRSARWQEAMGLFREMPTRGLSPNVVTYNSMIDACAKG 510
Query: 212 GRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTF 271
++ A ++ M V P+V SYN+ ++ +Q + AL+L+ M ++ PD+ ++
Sbjct: 511 EQWELAVQLLTGMPARGVAPDVISYNSAIEACGKGEQWELALQLLKGMPTRGPKPDIISY 570
Query: 272 YALIKGFVNEGNLEEAKRWYNKSGCGMNKAIFKLLVPFV--------CEKGD-LDFAFNL 322
+ + G RW G + A L V C KG+ D A +
Sbjct: 571 NSAVTACAKSG------RWREALGLLKDMATVGLTPNTVSYGAAIHACGKGEQWDVAVRI 624
Query: 323 CKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
K + + +D AK+ R +EA +L+
Sbjct: 625 LKEMQTHGATPNLITYSAAIDACAKQGRWKEAVDLL 660
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 93/178 (52%), Gaps = 1/178 (0%)
Query: 99 IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE-VDGLFKDLPHKL 157
IA + A ++ EMP V+++N+ + AC ++ E +D L + +
Sbjct: 117 IAACSNGRQWATAVRLLREMPTEGVTPDVVTYNSAIAACSKGGRWKEAMDLLTQMVAPTE 176
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
GI PD+V+YN+ I A + G A LL +M +G+ +LIT+N+ + R+ +A
Sbjct: 177 GITPDVVTYNSAIAACSNGGRWKEAMDLLEQMVAQGVPPNLITYNSAIGACAKGRRWEEA 236
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
+ E ++ P+ R+YN +D A + +A++L+G+M + +I DV ++ ++I
Sbjct: 237 MDLLEEVIEQGFPPSTRTYNPVIDACAKGGRWLEAMDLLGQMLTNDIPADVISYSSVI 294
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 92/181 (50%), Gaps = 1/181 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I K +E A ++ MP R V+S+N+ + AC ++++ L K +P +
Sbjct: 503 MIDACAKGEQWELAVQLLTGMPARGVAPDVISYNSAIEACGKGEQWELALQLLKGMPTR- 561
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G +PD++SYN+ + A G A LL +M G+ + +++ + ++ A
Sbjct: 562 GPKPDIISYNSAVTACAKSGRWREALGLLKDMATVGLTPNTVSYGAAIHACGKGEQWDVA 621
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+I + M PN+ +Y+A +D A + + K+A++L+ ++R + + PD T+ +I
Sbjct: 622 VRILKEMQTHGATPNLITYSAAIDACAKQGRWKEAVDLLTDLRRQGLTPDAQTYLTVISA 681
Query: 278 F 278
F
Sbjct: 682 F 682
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 92/191 (48%), Gaps = 3/191 (1%)
Query: 99 IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLG 158
I L K + A DE S+N + AC N +++ L +++P + G
Sbjct: 82 ILLEAKGRDWRTALAALDEFKISGGSLDTTSYNIAIAACSNGRQWATAVRLLREMPTE-G 140
Query: 159 IEPDLVSYNTIIKAFVDKGSLDSANTLLYEM--EKKGIRLDLITFNTLLLGFYSNGRFAD 216
+ PD+V+YN+ I A G A LL +M +GI D++T+N+ + + GR+ +
Sbjct: 141 VTPDVVTYNSAIAACSKGGRWKEAMDLLTQMVAPTEGITPDVVTYNSAIAACSNGGRWKE 200
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
A + E MV V PN+ +YN+ + A ++ ++A++L+ E+ + P T+ +I
Sbjct: 201 AMDLLEQMVAQGVPPNLITYNSAIGACAKGRRWEEAMDLLEEVIEQGFPPSTRTYNPVID 260
Query: 277 GFVNEGNLEEA 287
G EA
Sbjct: 261 ACAKGGRWLEA 271
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 103/209 (49%), Gaps = 9/209 (4%)
Query: 87 KDISKEGFTARL------IALYGKAAMFENARKVFDEM--PGRNCEQTVLSFNALLGACV 138
+++ EG T + IA K ++ A + +M P V+++N+ + AC
Sbjct: 134 REMPTEGVTPDVVTYNSAIAACSKGGRWKEAMDLLTQMVAPTEGITPDVVTYNSAIAACS 193
Query: 139 NSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL 198
N ++ E L + + + G+ P+L++YN+ I A + A LL E+ ++G
Sbjct: 194 NGGRWKEAMDLLEQMVAQ-GVPPNLITYNSAIGACAKGRRWEEAMDLLEEVIEQGFPPST 252
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
T+N ++ GR+ +A + M+ ++ +V SY++ + ++ K+A++L+ +
Sbjct: 253 RTYNPVIDACAKGGRWLEAMDLLGQMLTNDIPADVISYSSVIAACGRGRRWKEAMDLLEQ 312
Query: 259 MRSKEINPDVFTFYALIKGFVNEGNLEEA 287
MR++ ++P+V ++ + I +EA
Sbjct: 313 MRTQGVSPNVISYNSAIDACAKGDRWKEA 341
>gi|357140650|ref|XP_003571877.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08610-like [Brachypodium distachyon]
Length = 753
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 125/263 (47%), Gaps = 4/263 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI+ KA ++A+ + + E ++ LL + N +++ EV L + +
Sbjct: 472 LISASCKADRLKDAKTILTRLIAEGLEPNSTTYCILLHSLCNKRRWAEVCDLLAHM-KRA 530
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
EPD+ +YN I F G LD A +L +M D++T+NTLL G +A
Sbjct: 531 NCEPDVTAYNIFINYFCKYGHLDQAIDVLEKMVSDKCCPDIVTYNTLLNAISKEGMVEEA 590
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
I + + + +YN +D LA + + KKA+ L EM S I+PD T+ +L+ G
Sbjct: 591 LVIAHFIRQNGWQLVLITYNTLIDALANKGEVKKAMVLFDEMASGRISPDDITYGSLVMG 650
Query: 278 FVNEGNLEEAKRWYNKS---GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
F + EEA N++ G + F +++ +C G ++ A + + SE +
Sbjct: 651 FCKKNMSEEALELLNRTLALGFQVKTTTFIMVIQALCRDGKVEAAAEILRVMVSETNNTN 710
Query: 335 QAPLQLVVDRLAKELRVEEAKEL 357
+ +V R+AK R+EEA+ L
Sbjct: 711 SSFYLSIVRRVAKSGRIEEAERL 733
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 103/244 (42%), Gaps = 38/244 (15%)
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
PD ++ N +I G L SA ++L +M G + ITFNTL+ + + A
Sbjct: 359 PDTITCNMLIAQLCRGGQLSSAMSVLEDMRYSGTSPNGITFNTLIRCMCNQHMYDKAITF 418
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
W+ + + P V + +D + + +K+A+E++ E+ + PDV T+ ALI
Sbjct: 419 WKEQLRIGWPPYVMTNTLLVDLICKKCGSKRAMEVLDELSLEGCQPDVVTYNALISASCK 478
Query: 281 EGNLEEAK-----------------------------RW---------YNKSGCGMNKAI 302
L++AK RW ++ C +
Sbjct: 479 ADRLKDAKTILTRLIAEGLEPNSTTYCILLHSLCNKRRWAEVCDLLAHMKRANCEPDVTA 538
Query: 303 FKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGK 362
+ + + + C+ G LD A ++ ++ S++C D +++ ++KE VEEA + +
Sbjct: 539 YNIFINYFCKYGHLDQAIDVLEKMVSDKCCPDIVTYNTLLNAISKEGMVEEALVIAHFIR 598
Query: 363 TNSY 366
N +
Sbjct: 599 QNGW 602
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 3/204 (1%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G +PD+V+YN +I A L A T+L + +G+ + T+ LL + R+A+
Sbjct: 461 GCQPDVVTYNALISASCKADRLKDAKTILTRLIAEGLEPNSTTYCILLHSLCNKRRWAEV 520
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ M N P+V +YN ++ +A++++ +M S + PD+ T+ L+
Sbjct: 521 CDLLAHMKRANCEPDVTAYNIFINYFCKYGHLDQAIDVLEKMVSDKCCPDIVTYNTLLNA 580
Query: 278 FVNEGNLEEA---KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
EG +EEA + ++G + + L+ + KG++ A L S R D
Sbjct: 581 ISKEGMVEEALVIAHFIRQNGWQLVLITYNTLIDALANKGEVKKAMVLFDEMASGRISPD 640
Query: 335 QAPLQLVVDRLAKELRVEEAKELV 358
+V K+ EEA EL+
Sbjct: 641 DITYGSLVMGFCKKNMSEEALELL 664
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 110/244 (45%), Gaps = 7/244 (2%)
Query: 53 FRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY---KDISKEGFTARLIALYGKAAMFE 109
N+ Y + L N +R+ + ++L H K+ D++ I + K +
Sbjct: 497 LEPNSTTYCILLHSLCNKRRWAEVCDLLAHMKRANCEPDVTAYNI---FINYFCKYGHLD 553
Query: 110 NARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTI 169
A V ++M C ++++N LL A ++ + E + + G + L++YNT+
Sbjct: 554 QAIDVLEKMVSDKCCPDIVTYNTLLNA-ISKEGMVEEALVIAHFIRQNGWQLVLITYNTL 612
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
I A +KG + A L EM I D IT+ +L++GF +A ++ + +
Sbjct: 613 IDALANKGEVKKAMVLFDEMASGRISPDDITYGSLVMGFCKKNMSEEALELLNRTLALGF 672
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
+ ++ + L + + + A E++ M S+ N + + ++++ G +EEA+R
Sbjct: 673 QVKTTTFIMVIQALCRDGKVEAAAEILRVMVSETNNTNSSFYLSIVRRVAKSGRIEEAER 732
Query: 290 WYNK 293
+ +
Sbjct: 733 LHQE 736
>gi|145358679|ref|NP_198856.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171831|sp|Q9FND8.1|PP409_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g40400
gi|10178151|dbj|BAB11596.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|110742507|dbj|BAE99171.1| hypothetical protein [Arabidopsis thaliana]
gi|332007160|gb|AED94543.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 610
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 104/210 (49%), Gaps = 7/210 (3%)
Query: 84 KQYKDISKEGFTARLIAL------YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGAC 137
+ ++++ GF+ ++ K + E+ +V+ M +FN L
Sbjct: 187 RVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNILTNVF 246
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLD 197
N F EVD + + + G EPDLV+YNT++ ++ +G L A L M ++ + D
Sbjct: 247 CNDSNFREVDDFLEKMEEE-GFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPD 305
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
L+T+ +L+ G +GR +A + + MV+ ++P+ SYN + E +++ +L+
Sbjct: 306 LVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLH 365
Query: 258 EMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
EM + PD FT +++GFV EG L A
Sbjct: 366 EMLGNSVVPDRFTCKVIVEGFVREGRLLSA 395
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 69/335 (20%), Positives = 129/335 (38%), Gaps = 54/335 (16%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFR---WIEEILEH 82
+++ ++ ++ R VD F + + F + Y V R + ++ +I+
Sbjct: 240 NILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYR 299
Query: 83 QKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKK 142
++ D+ +T+ LI K A + F M R + +S+N L+ A
Sbjct: 300 RRVVPDLVT--YTS-LIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGM 356
Query: 143 FDEVDGLFKDLPHKLG--IEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLIT 200
+ L ++ LG + PD + I++ FV +G L SA + E+ + + +
Sbjct: 357 MQQSKKLLHEM---LGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEV 413
Query: 201 FNTLLLGFYSNGR------------------------------FADAEKIWETMV----- 225
+ L++ G+ + + I E +V
Sbjct: 414 CDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKL 473
Query: 226 -NMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
N N + ++Y A + L + ++A L+ EM E+ PD F AL+ G+ E +
Sbjct: 474 KNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDF 533
Query: 285 EEAKRWYNKSGCGMNKAIFKL-----LVPFVCEKG 314
++A+R S M IF LV VCE G
Sbjct: 534 DKAERLL--SLFAMEFRIFDPESYNSLVKAVCETG 566
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/130 (20%), Positives = 59/130 (45%)
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
D V ++ ++K ++ G ++ + E+ G + ++T N LL G D +++
Sbjct: 165 DPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVY 224
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
M + + PN ++N + + ++ + + +M + PD+ T+ L+ +
Sbjct: 225 SVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRR 284
Query: 282 GNLEEAKRWY 291
G L+EA Y
Sbjct: 285 GRLKEAFYLY 294
>gi|410109923|gb|AFV61041.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
hederifolia]
Length = 431
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 141/299 (47%), Gaps = 14/299 (4%)
Query: 86 YKDISKEGFTARL------IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
Y++I + G+ A L + + K A+ VFD + +V+S+N L+ +
Sbjct: 130 YEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIR 189
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
+E L K G++PD+ +Y+ +I + +D AN L EM KG+ + +
Sbjct: 190 LGDLNEGFRL-KSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGV 248
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
TF TL+ G NGR A +I++ M++ + P++ +YN + GL + K+A +L+ EM
Sbjct: 249 TFTTLIDGHCKNGRVDLAMEIYKQMLSQCLLPDLITYNTLIYGLXKKGDLKQAHDLIDEM 308
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLE---EAKRWYNKSGCGMNKAIFKLLVPFVCEKGDL 316
K + PD FT+ LI G EG+L+ E ++ + ++ + L+ +C++G
Sbjct: 309 SMKGLKPDKFTYXTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRS 368
Query: 317 DFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA----KELVELGKTNSYCRYNL 371
A + + S D ++++ K+ V + KE+ G S YN+
Sbjct: 369 VDAEKMLREMLSVGLKPDDRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNV 427
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 87/180 (48%), Gaps = 1/180 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K + A +++ +M + ++++N L+ + L ++ K
Sbjct: 253 LIDGHCKNGRVDLAMEIYKQMLSQCLLPDLITYNTLIYGLXKKGDLKQAHDLIDEMSMK- 311
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD +Y T+I +G LD+A M ++ IRLD + + L+ G GR DA
Sbjct: 312 GLKPDKFTYXTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDA 371
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
EK+ M+++ ++P+ R+Y ++ + K +L+ EM+ P V T+ L+ G
Sbjct: 372 EKMLREMLSVGLKPDDRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
>gi|125564557|gb|EAZ09937.1| hypothetical protein OsI_32236 [Oryza sativa Indica Group]
Length = 544
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 145/310 (46%), Gaps = 15/310 (4%)
Query: 16 ATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGR--FRTNTGIYTGTVQRLANAKRF 73
A A P + S++ + K KRL + + D + F + +YT V + R
Sbjct: 211 AGAPDPATLASLLGALSK----KRLASEAQAMFDSYKSVFTPDVVLYTTLVHAWCRSGRL 266
Query: 74 RWIEEIL-EHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNA 132
E + E Q+ + +TA + A+Y +A A+++ +M C +FNA
Sbjct: 267 DEAERVFAEMQQAGVTPNVYTYTAVIDAMY-RAGQVPRAQELLCQMIDSGCPPNTATFNA 325
Query: 133 LLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKG--SLDSANTLLYEME 190
++ A V + + ++V + + +LG EPD+++YN +++ KG +LD+A +L M
Sbjct: 326 IMRAHVKAGRSEQVLQVHNQM-RQLGCEPDIITYNFLMETHCGKGQSNLDAAMKMLTRMI 384
Query: 191 KKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTK 250
KG D TFN +L G A K++E M + +PNV +YN + +EK
Sbjct: 385 AKGCIPDCHTFNPMLKLVLVLGNVNAARKLYERMQELQCKPNVVTYNLLMRLFNLEKSMD 444
Query: 251 KALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA----KRWYNKSGCGMNKAIFKLL 306
L + +M ++ + P+V T+ ALI+ F GN + A + + K ++ ++
Sbjct: 445 MVLRIKRDMDAQGVEPNVNTYAALIEAFCGRGNWKRAHMTLREMVEEKALKPTKPVYDMV 504
Query: 307 VPFVCEKGDL 316
+ + + G L
Sbjct: 505 LALLRKAGQL 514
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 121/281 (43%), Gaps = 10/281 (3%)
Query: 58 GIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDE 117
+Y + LA F +L+ ++ LI Y +A M A +F
Sbjct: 146 ALYAAMIDLLAKHHHFPLARHLLDEMRERSVPISAQLILALIRRYVRAEMPSEASDLFRR 205
Query: 118 MP--GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVD 175
M G + +LLGA + E +F +K PD+V Y T++ A+
Sbjct: 206 MEEYGAGAPDPA-TLASLLGALSKKRLASEAQAMFDS--YKSVFTPDVVLYTTLVHAWCR 262
Query: 176 KGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRS 235
G LD A + EM++ G+ ++ T+ ++ Y G+ A+++ M++ PN +
Sbjct: 263 SGRLDEAERVFAEMQQAGVTPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSGCPPNTAT 322
Query: 236 YNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEG--NLEEAKRWYNK 293
+NA + ++++ L++ +MR PD+ T+ L++ +G NL+ A + +
Sbjct: 323 FNAIMRAHVKAGRSEQVLQVHNQMRQLGCEPDIITYNFLMETHCGKGQSNLDAAMKMLTR 382
Query: 294 ---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERC 331
GC + F ++ V G+++ A L +R +C
Sbjct: 383 MIAKGCIPDCHTFNPMLKLVLVLGNVNAARKLYERMQELQC 423
>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62914, mitochondrial; Flags: Precursor
gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats. EST gb|AA728420 comes from this gene
[Arabidopsis thaliana]
gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 528
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 110/211 (52%), Gaps = 4/211 (1%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
++A +F EM + V+++++L+ N ++ + L D+ + I P+LV+++
Sbjct: 270 DDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIER-KINPNLVTFSA 328
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
+I AFV KG L A L EM K+ I ++ T+++L+ GF R +A+++ E M+ +
Sbjct: 329 LIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKD 388
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
PNV +YN ++G K+ K +EL EM + + + T+ LI GF + + A+
Sbjct: 389 CLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 448
Query: 289 RWYNKS---GCGMNKAIFKLLVPFVCEKGDL 316
+ + G N + +L+ +C+ G L
Sbjct: 449 MVFKQMVSVGVHPNILTYNILLDGLCKNGKL 479
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 123/246 (50%), Gaps = 9/246 (3%)
Query: 54 RTNTGIYTGTVQRLANAKRF----RWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFE 109
R N Y+ + L N R+ R + +++E + ++ F+A LI + K
Sbjct: 285 RPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVT---FSA-LIDAFVKKGKLV 340
Query: 110 NARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTI 169
A K+++EM R+ + + ++++L+ + E + + + K + P++V+YNT+
Sbjct: 341 KAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCL-PNVVTYNTL 399
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
I F +D L EM ++G+ + +T+ TL+ GF+ +A+ +++ MV++ V
Sbjct: 400 INGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGV 459
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
PN+ +YN LDGL + KA+ + ++ + PD++T+ +I+G G +
Sbjct: 460 HPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMGGI 519
Query: 290 WYNKSG 295
++ S
Sbjct: 520 YFVASA 525
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 117/236 (49%), Gaps = 8/236 (3%)
Query: 101 LYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIE 160
L+ KA+ A + D M R C+ ++++ A++ D L + IE
Sbjct: 195 LHNKAS---EAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKM-EAAKIE 250
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
++V Y+T+I + D A L EME KG+R ++IT+++L+ + GR++DA ++
Sbjct: 251 ANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRL 310
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
M+ + PN+ +++A +D + + KA +L EM + I+P++FT+ +LI GF
Sbjct: 311 LSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCM 370
Query: 281 EGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV 333
L EAK+ + C N + L+ C+ +D L R S+R LV
Sbjct: 371 LDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMEL-FREMSQRGLV 425
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 102/218 (46%), Gaps = 4/218 (1%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
++A +F M +++ F+ LL A KFD V F + LGI +L +YN
Sbjct: 59 LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVIS-FGEKMEILGISHNLYTYN 117
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
+I F L A LL +M K G D++T N+LL GF R +DA + + MV M
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+P+ ++ + GL + + +A+ L+ M + PD+ T+ A++ G G+ + A
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237
Query: 288 KRWYNKSGCG---MNKAIFKLLVPFVCEKGDLDFAFNL 322
NK N I+ ++ +C+ D A NL
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNL 275
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 111/272 (40%), Gaps = 39/272 (14%)
Query: 124 EQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSAN 183
E +++ N+LL + + + L + ++G +PD V++ T+I A
Sbjct: 145 EPDIVTLNSLLNGFCHGNRISDAVALVDQMV-EMGYKPDTVTFTTLIHGLFLHNKASEAV 203
Query: 184 TLLYEMEKKGIRLDLITFNTLLLGFYSNG------------------------------- 212
L+ M ++G + DL+T+ ++ G G
Sbjct: 204 ALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSL 263
Query: 213 ----RFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDV 268
DA ++ M N VRPNV +Y++ + L + A L+ +M ++INP++
Sbjct: 264 CKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNL 323
Query: 269 FTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKR 325
TF ALI FV +G L +A++ Y K N + L+ C L A + +
Sbjct: 324 VTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLEL 383
Query: 326 TFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
+ CL + +++ K RV++ EL
Sbjct: 384 MIRKDCLPNVVTYNTLINGFCKAKRVDKGMEL 415
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 114/276 (41%), Gaps = 16/276 (5%)
Query: 90 SKEGFTARLIALYGKAAMFENA-----RKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
S + F R + + G AA F + R+ F +T + +L ++ + D
Sbjct: 8 SAKRFVHRSLVVRGNAATFPLSFSFCRRRAFSG-------KTSYDYREVLRTGLSDIELD 60
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
+ GLF + P ++ ++ ++ A D + +ME GI +L T+N L
Sbjct: 61 DAIGLFGVMAQSRPF-PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNIL 119
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+ F R + A + M+ + P++ + N+ L+G + A+ LV +M
Sbjct: 120 INCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGY 179
Query: 265 NPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFN 321
PD TF LI G EA ++ GC + + +V +C++GD D A N
Sbjct: 180 KPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALN 239
Query: 322 LCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
L + + + + V+D L K ++A L
Sbjct: 240 LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNL 275
>gi|255660774|gb|ACU25556.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana]
Length = 418
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 108/207 (52%), Gaps = 4/207 (1%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A+ VFD + + +V+SFN L+ + DE L K+ G++PD+ +Y+ +I
Sbjct: 155 AQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRL-KNAMQASGVQPDVYTYSVLI 213
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
+ +D AN L EM G+ + +TF TL+ G NGR A +I++ M++ ++
Sbjct: 214 NGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLS 273
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA--- 287
++ +YN + GL + K+A +L+ EM K + PD T+ LI G EG+LE A
Sbjct: 274 ADLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEY 333
Query: 288 KRWYNKSGCGMNKAIFKLLVPFVCEKG 314
++ K ++ + L+ +C++G
Sbjct: 334 RKRMIKENIRLDDVAYTALISGLCQEG 360
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 83/173 (47%), Gaps = 1/173 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K + A +++ +M ++ ++++N L+ + L ++ K
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQDLIDEMSMK- 305
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD ++Y T+I +G L++A M K+ IRLD + + L+ G GR DA
Sbjct: 306 GLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDA 365
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
EK+ M+++ ++P + +Y ++ + +L+ EM+ P V T
Sbjct: 366 EKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Vitis vinifera]
Length = 728
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 140/304 (46%), Gaps = 4/304 (1%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMP 119
YTG + L R ++L + + L++ K + +A K+ M
Sbjct: 322 YTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMI 381
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL-PHKLGIEPDLVSYNTIIKAFVDKGS 178
+ + V+++N L+ + K DE LF + ++ +EP++ ++N +I +G
Sbjct: 382 EKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGR 441
Query: 179 LDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNA 238
L A + +M KKG +L+T+N LL G G+ +A ++W+ ++++ PN +Y+
Sbjct: 442 LTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSI 501
Query: 239 RLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSG--- 295
+DG + A L EMR+ +NP +F + L+ EG+LE+AK + + G
Sbjct: 502 LIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNAN 561
Query: 296 CGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAK 355
C + F ++ + GD F L + D +++RL+K ++EAK
Sbjct: 562 CEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAK 621
Query: 356 ELVE 359
+E
Sbjct: 622 SALE 625
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 127/277 (45%), Gaps = 10/277 (3%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
KA + A + EM C ++ L+ + DE L + + K G + D+
Sbjct: 191 KAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKK-GFDADV 249
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
V Y T+I F + G+LD L EM KGI +++T++ L+ G G++ +A +
Sbjct: 250 VLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNA 309
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M + P+V +Y +DGL + + A++L+ M K P T+ L+ G EG
Sbjct: 310 MAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGL 369
Query: 284 LEEA---KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTF-SERCLVDQA-PL 338
+ +A R + G + + L+ +C+KG +D A L F +E CL
Sbjct: 370 VIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTF 429
Query: 339 QLVVDRLAKELRVEEA----KELVELGKTNSYCRYNL 371
+++ L KE R+ +A +++V+ G + YN+
Sbjct: 430 NMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNM 466
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 131/279 (46%), Gaps = 12/279 (4%)
Query: 89 ISKEGFTARL----IALYG---KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSK 141
+ K GFT + I L G +FE A + EM ++ ++S+N L+ +K
Sbjct: 135 VLKRGFTVNVFIMNIVLKGLCRNGGVFE-AMGLIREMGRKSVSPDIVSYNTLINGLCKAK 193
Query: 142 KFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITF 201
K E GL ++ G P+ V+ T++ G +D A LL M+KKG D++ +
Sbjct: 194 KLKEAVGLLLEM-EAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLY 252
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS 261
TL+ GF +NG +++++ M+ + NV +Y+ + GL Q K+A ++ M
Sbjct: 253 GTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAE 312
Query: 262 KEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDF 318
I+PDV T+ LI G +G A N + G + + +L+ +C++G +
Sbjct: 313 HGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVID 372
Query: 319 AFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
AF + + + D ++ L + +V+EA +L
Sbjct: 373 AFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKL 411
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 97/223 (43%), Gaps = 7/223 (3%)
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
K G ++ N ++K G + A L+ EM +K + D++++NTL+ G +
Sbjct: 137 KRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLK 196
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
+A + M PN + +DGL + + +A+EL+ M+ K + DV + LI
Sbjct: 197 EAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLI 256
Query: 276 KGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCL 332
GF N GNL+ K +++ G N + LV +C G A +
Sbjct: 257 SGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIH 316
Query: 333 VDQAPLQLVVDRLAKELRVEEAKEL----VELGKTNSYCRYNL 371
D ++D L K+ R A +L VE G+ S YN+
Sbjct: 317 PDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNV 359
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 108/242 (44%), Gaps = 14/242 (5%)
Query: 27 VIRGIYKENNLKRLVD---KFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQ 83
+I G+ KE L + V K K G T + G ++ I+E +E
Sbjct: 432 LIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKA-------GKIKEAMELW 484
Query: 84 KQYKDIS--KEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNS 140
KQ D+ FT + LI + K M A+ +F EM + +N L+ +
Sbjct: 485 KQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKE 544
Query: 141 KKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLIT 200
++ LF+++ + EPD++S+NT+I + G L +M + G+R D +T
Sbjct: 545 GSLEQAKSLFQEMGNA-NCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALT 603
Query: 201 FNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMR 260
F+TL+ G +A+ E MV P+ Y++ L GL+ + T + + L+ +M
Sbjct: 604 FSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMA 663
Query: 261 SK 262
+K
Sbjct: 664 AK 665
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 107/255 (41%), Gaps = 43/255 (16%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL---- 153
LI K A K+ +M + ++++N LLG C+ + K E L+K +
Sbjct: 432 LIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLG 491
Query: 154 --PHKL----------------------------GIEPDLVSYNTIIKAFVDKGSLDSAN 183
P+ G+ P L YNT++ + +GSL+ A
Sbjct: 492 FVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAK 551
Query: 184 TLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNA---RL 240
+L EM D+I+FNT++ G G F +++ MV M +RP+ +++ RL
Sbjct: 552 SLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRL 611
Query: 241 DGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCG 297
L + K ALE M + PD + +L+KG ++G+ E ++ G
Sbjct: 612 SKLGELDEAKSALE---RMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTV 668
Query: 298 MNKAIFKLLVPFVCE 312
+++ I ++ +C
Sbjct: 669 LDRKIVSTILTCLCH 683
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 73/170 (42%), Gaps = 3/170 (1%)
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
T N L+ + + A ++ M +++V P+ S +A ++ A ++ + +VG +
Sbjct: 76 TCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALIECFADAQKPQLGFGVVGLV 135
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKGDL 316
+ +VF ++KG G + EA R + + + L+ +C+ L
Sbjct: 136 LKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKL 195
Query: 317 DFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKTNSY 366
A L + C + ++D L K+ R++EA EL+E K +
Sbjct: 196 KEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGF 245
>gi|414874000|tpg|DAA52557.1| TPA: hypothetical protein ZEAMMB73_743775 [Zea mays]
Length = 630
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 126/278 (45%), Gaps = 5/278 (1%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMP 119
Y+ V LA+A ++ +S E F L A+ +A A K+F M
Sbjct: 200 YSTVVSALADAGCVEEAVALVHEMVVDGVVSAEAFNPVLKAML-RAGDVNGAVKLFRFMQ 258
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL 179
+ C T +++N LL + + + + + ++ GI P L++Y ++ V G +
Sbjct: 259 LKGCTLTAVTYNVLLHGLLLCGEARAAMNIMRRMENE-GIVPGLMTYGAVVDGLVKCGRV 317
Query: 180 DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNAR 239
+ A + EM +G+ F+ ++ GF +G A +WETMV V+PNV Y+A
Sbjct: 318 EDAWKVAQEMGGQGLAPSEFVFSAVITGFCKSGEVDRALMVWETMVAARVKPNVVLYSAM 377
Query: 240 LDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGC 296
+DG A + +A +L EM + P++ T+ ++++G+ + N A + K GC
Sbjct: 378 IDGFARSGRMTEAEKLFEEMVDAKCIPNIVTYSSMVRGYFHIANSSRALSTWEEMIKVGC 437
Query: 297 GMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
+ +L+ +C+ G L A + K C D
Sbjct: 438 VPTAISYSILISGLCDVGRLKDAMMVWKNMIGRGCAPD 475
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 114/245 (46%), Gaps = 13/245 (5%)
Query: 126 TVLSFNALLGACVNSKKFDEVDGLF--------KDLPHKLGIEPDLVSYNTIIKAFVDKG 177
T+LSFN LL C+ S GL+ D+ + PD +Y+T++ A D G
Sbjct: 153 TLLSFNLLL-KCICSSMVPRNPGLYLAVALGILHDVIPAWNLVPDKFTYSTVVSALADAG 211
Query: 178 SLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYN 237
++ A L++EM G+ + FN +L G A K++ M +YN
Sbjct: 212 CVEEAVALVHEMVVDGV-VSAEAFNPVLKAMLRAGDVNGAVKLFRFMQLKGCTLTAVTYN 270
Query: 238 ARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---S 294
L GL + + + A+ ++ M ++ I P + T+ A++ G V G +E+A + +
Sbjct: 271 VLLHGLLLCGEARAAMNIMRRMENEGIVPGLMTYGAVVDGLVKCGRVEDAWKVAQEMGGQ 330
Query: 295 GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA 354
G ++ +F ++ C+ G++D A + + + R + ++D A+ R+ EA
Sbjct: 331 GLAPSEFVFSAVITGFCKSGEVDRALMVWETMVAARVKPNVVLYSAMIDGFARSGRMTEA 390
Query: 355 KELVE 359
++L E
Sbjct: 391 EKLFE 395
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 102/232 (43%), Gaps = 5/232 (2%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K E+A KV EM G+ + F+A++ S + D +++ + ++P++
Sbjct: 313 KCGRVEDAWKVAQEMGGQGLAPSEFVFSAVITGFCKSGEVDRALMVWETM-VAARVKPNV 371
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
V Y+ +I F G + A L EM +++T+++++ G++ + A WE
Sbjct: 372 VLYSAMIDGFARSGRMTEAEKLFEEMVDAKCIPNIVTYSSMVRGYFHIANSSRALSTWEE 431
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M+ + P SY+ + GL + K A+ + M + PD + +++KG G
Sbjct: 432 MIKVGCVPTAISYSILISGLCDVGRLKDAMMVWKNMIGRGCAPDTIAYTSMMKGLCMSGM 491
Query: 284 LEEAKRWYN----KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERC 331
++ R +N K + + +L+ + DL A +L + + C
Sbjct: 492 VDGGLRLFNDMLAKGDAKPDVISYNVLLDALIRTNDLPRAMDLLNQMLDQMC 543
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 87/187 (46%), Gaps = 3/187 (1%)
Query: 102 YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEP 161
+ ++ A K+F+EM C ++++++++ + ++++ K+G P
Sbjct: 381 FARSGRMTEAEKLFEEMVDAKCIPNIVTYSSMVRGYFHIANSSRALSTWEEM-IKVGCVP 439
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
+SY+ +I D G L A + M +G D I + +++ G +G +++
Sbjct: 440 TAISYSILISGLCDVGRLKDAMMVWKNMIGRGCAPDTIAYTSMMKGLCMSGMVDGGLRLF 499
Query: 222 ETMV-NMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGF-V 279
M+ + +P+V SYN LD L +A++L+ +M + +PD T ++ F V
Sbjct: 500 NDMLAKGDAKPDVISYNVLLDALIRTNDLPRAMDLLNQMLDQMCDPDTITCNIFLREFGV 559
Query: 280 NEGNLEE 286
EG E
Sbjct: 560 LEGKGRE 566
>gi|255660944|gb|ACU25641.1| pentatricopeptide repeat-containing protein [Bouchea fluminensis]
Length = 481
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 112/237 (47%), Gaps = 5/237 (2%)
Query: 92 EGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFK 151
E +I YGKA + + + K+F +M +T+ S++AL + ++ F
Sbjct: 80 EDLWVLMIDSYGKAGIVQESVKMFQKMEELGVXRTIKSYDALFKVILRRGRYMMAKRYFN 139
Query: 152 DLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSN 211
+ + GIEP ++N +I F G ++++N +M + I D++T+NT++ G+Y
Sbjct: 140 KMLSE-GIEPTRHTFNVMIWGFFLSGKVETSNRFFXDMXSREITPDVVTYNTMINGYYRV 198
Query: 212 GRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTF 271
+ + EK + M N+ P V +Y + G + AL L EM+ I P+ T+
Sbjct: 199 BKMEEXEKYFVEMKGRNIEPTVVTYTTLIKGYXSVDRVDBALXLXEEMKXFGIKPNAITY 258
Query: 272 YALIKGFVNEGNLEEA----KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCK 324
L+ G + + EA K K + +IF L+ C+ GDLD A ++ K
Sbjct: 259 STLLPGLCDAEKMSEARSILKEMVXKYXAPTDNSIFMRLISGQCKVGDLDAAADVJK 315
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 81/167 (48%), Gaps = 4/167 (2%)
Query: 125 QTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANT 184
+T L +LG + K + + D+P K G+E D + +I ++ G + +
Sbjct: 46 ETHLKIIEILG---RASKLNHARCILLDMPKK-GLEWDEDLWVLMIDSYGKAGIVQESVK 101
Query: 185 LLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLA 244
+ +ME+ G+ + +++ L GR+ A++ + M++ + P ++N + G
Sbjct: 102 MFQKMEELGVXRTIKSYDALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFF 161
Query: 245 IEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY 291
+ + + + +M S+EI PDV T+ +I G+ +EE ++++
Sbjct: 162 LSGKVETSNRFFXDMXSREITPDVVTYNTMINGYYRVBKMEEXEKYF 208
>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
Length = 800
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/371 (21%), Positives = 152/371 (40%), Gaps = 41/371 (11%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
VI+G+ + K V FK+ +D G T Y + L ++ R + E +
Sbjct: 358 VIKGLLNDKLWKDAVSLFKEMADSGIPDAFT--YNILIHWLCQRRKIREALNLWEKMNET 415
Query: 87 KDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEV 146
L+ Y + A K++ EMPG+ V+++ L+ +N FD+
Sbjct: 416 GVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKA 475
Query: 147 DGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLL 206
L ++ G+ + +YNT+I G + +L E +G +T+N+++
Sbjct: 476 YALLAEMKQN-GVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIIN 534
Query: 207 GFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINP 266
GF G A +++ M + PN+ +Y + +DG AL+++ ++R K + P
Sbjct: 535 GFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRP 594
Query: 267 DVFTFYALIKGFVNEGN-----------------------------------LEEAKRWY 291
D+ + +LI GF EGN +EEA R+Y
Sbjct: 595 DIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFY 654
Query: 292 N---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKE 348
K G ++ A + L+ + G++ FA L ++ + D + L +
Sbjct: 655 EKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRN 714
Query: 349 LRVEEAKELVE 359
+++A++L++
Sbjct: 715 GDIDDARKLLD 725
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 109/259 (42%), Gaps = 42/259 (16%)
Query: 76 IEEILEHQKQYKDISKEGFTA------RLIALYGKAAMFENARKVFDEMPGRNCEQTVLS 129
+ + E + K EGF +I + KA M +A V+ +M + +++
Sbjct: 504 VGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVT 563
Query: 130 FNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLL--- 186
+ + + + D + D+ K G+ PD+ +YN++I F +G++ A +L
Sbjct: 564 YTSFIDGYCKTSCCDLALKMLNDVRCK-GLRPDIAAYNSLIYGFCQEGNMSHALQVLVLM 622
Query: 187 -------------------------------YE-MEKKGIRLDLITFNTLLLGFYSNGRF 214
YE M K+GI LD T+ TL+ GF +G
Sbjct: 623 LKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNV 682
Query: 215 ADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYAL 274
A K++ MV P+ ++ A GL A +L+ EM +I P+V + L
Sbjct: 683 TFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNML 742
Query: 275 IKGFVNEGNLEEAKRWYNK 293
I G++ G L+EA R +++
Sbjct: 743 INGYLRNGKLQEAFRLHDE 761
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 73/146 (50%), Gaps = 1/146 (0%)
Query: 130 FNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEM 189
+N+ + N K +E ++ + K GI+ D +Y T+I F G++ A L EM
Sbjct: 634 YNSFITGYKNLKMMEEALRFYEKM-IKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEM 692
Query: 190 EKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQT 249
KG D ITF L G NG DA K+ + M +++RPNV YN ++G +
Sbjct: 693 VAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKL 752
Query: 250 KKALELVGEMRSKEINPDVFTFYALI 275
++A L EM ++I PD T+ L+
Sbjct: 753 QEAFRLHDEMLERKIMPDDTTYDILV 778
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 100/221 (45%), Gaps = 3/221 (1%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K M+++A ++FDEMP E + + + + + + + + G P
Sbjct: 189 KEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKM-QDAGFVPWD 247
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
++N+++ V G ++ A + E+ G ++ ++ TL+ G+ A I+E
Sbjct: 248 FTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEE 307
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
+ + P +Y + G E +KA EL +MR + P F +IKG +N+
Sbjct: 308 TLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKL 367
Query: 284 LEEAKRWYNK-SGCGMNKAI-FKLLVPFVCEKGDLDFAFNL 322
++A + + + G+ A + +L+ ++C++ + A NL
Sbjct: 368 WKDAVSLFKEMADSGIPDAFTYNILIHWLCQRRKIREALNL 408
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 90/203 (44%), Gaps = 3/203 (1%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ PD S ++ S A LL EM KG LD F+ ++ + G + DA
Sbjct: 137 GVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGHPLDAWMFDVVMRACFKEGMYDDA 196
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++++ M + P+ R + + L + +AL ++ +M+ P FTF +++
Sbjct: 197 VRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNSVVDV 256
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
V G +EEA ++ +G M+ + L+ C + ++ A ++ + T + +
Sbjct: 257 LVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLVPT 316
Query: 335 QAPLQLVVDRLAKELRVEEAKEL 357
+++ +E E+A EL
Sbjct: 317 DVTYTVLIRGCTEEGMPEKAYEL 339
>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 711
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 131/287 (45%), Gaps = 11/287 (3%)
Query: 86 YKDISKEGFTA------RLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
Y ++ ++GF +I KA +NA + +M +++ +++
Sbjct: 139 YHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYST 198
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
+++E +F+++ + G+ PD+VS+N+ + + G A + Y M KG R +++
Sbjct: 199 LGRWEEATKMFREMTGR-GLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIV 257
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
T+ LL G+ + G FAD + TM + N + +D A +A+ ++ EM
Sbjct: 258 TYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEM 317
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDL 316
+ + ++PDVFT+ LI G L +A +N+ +G N ++ L+ C GDL
Sbjct: 318 QGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDL 377
Query: 317 DFAFNLCKRTFSERCL-VDQAPLQLVVDRLAKELRVEEAKELVELGK 362
A L + + A +V + KE RV +A + +L K
Sbjct: 378 VKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVK 424
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 106/201 (52%), Gaps = 4/201 (1%)
Query: 123 CEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSA 182
C V+++N ++ K + L+ ++ + G PD+V++N+II A ++D+A
Sbjct: 112 CSPDVVTYNTVIHGFFKEGKIGKACNLYHEMMQQ-GFVPDVVTHNSIINALCKARAVDNA 170
Query: 183 NTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDG 242
LL +M G+ + +T+ +++ G+ + GR+ +A K++ M + P++ S+N+ +D
Sbjct: 171 ELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDS 230
Query: 243 LAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMN 299
L ++K+A E+ M +K P++ T+ L+ G+ EG + ++N G N
Sbjct: 231 LCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVAN 290
Query: 300 KAIFKLLVPFVCEKGDLDFAF 320
+F +L+ ++G +D A
Sbjct: 291 CLVFTILIDAYAKRGMMDEAM 311
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 133/308 (43%), Gaps = 20/308 (6%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLAN----AKRFRWIEEILE 81
++I + + L VDKF + G + NT +Y +Q K + E++
Sbjct: 331 TLISALCRMGRLADAVDKFNQMIGTG-VQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMN 389
Query: 82 HQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACV-- 138
+ +I+ F ++ K +A +FD + ++ FN L+ G C+
Sbjct: 390 NGIPRPNIA---FFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVG 446
Query: 139 -NSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLD 197
K F +D + GI PD +YNT++ + G +D L EM K I+
Sbjct: 447 EMGKAFSVLDAMIS-----AGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPT 501
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
+T+N +L G + GR A+K+ M+ ++ +YN L GL T +A+ +
Sbjct: 502 TVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQ 561
Query: 258 EMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKG 314
++ + + ++ T +I EEAK ++ SG N + + +++ + ++G
Sbjct: 562 KLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEG 621
Query: 315 DLDFAFNL 322
++ A N+
Sbjct: 622 SVEEADNM 629
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 77/157 (49%), Gaps = 3/157 (1%)
Query: 137 CVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEK-KGI- 194
C + D V L + + +LG PD SY ++K D A LL M K +G+
Sbjct: 54 CCTKRTDDAVKVLLRRMT-ELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVC 112
Query: 195 RLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALE 254
D++T+NT++ GF+ G+ A ++ M+ P+V ++N+ ++ L + A
Sbjct: 113 SPDVVTYNTVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAEL 172
Query: 255 LVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY 291
L+ +M + P+ T+ ++I G+ G EEA + +
Sbjct: 173 LLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMF 209
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/289 (19%), Positives = 116/289 (40%), Gaps = 38/289 (13%)
Query: 23 FIGSVIRGIYKE------NNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWI 76
F S++ I KE +++ LV + SD+ F T + G K F +
Sbjct: 399 FFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNT---LIDGYCLVGEMGKAFSVL 455
Query: 77 EEILEHQKQYKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLG 135
+ ++ I + FT L+ Y K+ ++ +F EM + + T +++N +L
Sbjct: 456 DAMIS-----AGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIIL- 509
Query: 136 ACVNSKKFDEVDGLFK--------DLPHKL---GIEPDLVSYNTIIKAFVDKGSLDSANT 184
DGLF+ + H++ G L +YN I+K D A
Sbjct: 510 -----------DGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIV 558
Query: 185 LLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLA 244
+ ++ ++ ++ T NT++ Y+ R +A+ ++ + + + PN +Y + L
Sbjct: 559 MFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLL 618
Query: 245 IEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK 293
E ++A + M P I+ + +G + +A + +K
Sbjct: 619 KEGSVEEADNMFSSMEKSGCAPCSRLLNDTIRTLLEKGEIVKAGNYMSK 667
>gi|222615488|gb|EEE51620.1| hypothetical protein OsJ_32898 [Oryza sativa Japonica Group]
Length = 822
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 102/215 (47%), Gaps = 4/215 (1%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A + EM GR V++F AL+ V + K E + + + + + PD+ YN +I
Sbjct: 398 ASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTER-QVFPDVNIYNVLI 456
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
K L +A +L EM +K ++ D + TL+ GF + DA KI+E M + VR
Sbjct: 457 SGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVR 516
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
P++ S NA + G +A+ + MR PD FT+ +I G+ +GNL A RW
Sbjct: 517 PDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRW 576
Query: 291 YN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
K C N + L+ C+ GD D A L
Sbjct: 577 LCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGL 611
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 89/182 (48%), Gaps = 1/182 (0%)
Query: 110 NARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTI 169
A + +M C+ +++FN L+ + + + ++ + + P+ +SY +
Sbjct: 327 QAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRR-ELNPNQLSYTPL 385
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
I F +G L +A+ LL EM +G D++TF L+ G G+ ++A + E M V
Sbjct: 386 IHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQV 445
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
P+V YN + GL + A ++ EM K + PD F + LI GF+ NL +A++
Sbjct: 446 FPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARK 505
Query: 290 WY 291
+
Sbjct: 506 IF 507
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 113/249 (45%), Gaps = 4/249 (1%)
Query: 114 VFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAF 173
+ EM + T++++ +L+ +++ LF ++ K G+ P++ YN++I A
Sbjct: 261 LLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEM-RKRGLSPNVQIYNSVIDAL 319
Query: 174 VDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNV 233
S A +L +M G D+ITFNTL+ G G AE + + PN
Sbjct: 320 CKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQ 379
Query: 234 RSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA---KRW 290
SY + G + + A +L+ EM + PDV TF ALI G V G + EA +
Sbjct: 380 LSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREK 439
Query: 291 YNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELR 350
+ + I+ +L+ +C+K L A N+ + + D+ ++D +
Sbjct: 440 MTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSEN 499
Query: 351 VEEAKELVE 359
+ +A+++ E
Sbjct: 500 LGDARKIFE 508
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 122/249 (48%), Gaps = 16/249 (6%)
Query: 83 QKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSK 141
++QY + + RL+ L + +++ARK++DEM G + S L+ G C+ +
Sbjct: 160 REQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGR 219
Query: 142 KFDEVDGLFKDLPHKLGIE--PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
V+ K + + G P +V YN +I + +G + LL EME KG L+
Sbjct: 220 ----VEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLV 275
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVR---PNVRSYNARLDGLAIEKQTKKALELV 256
T+ +L+ G+ D EKI + M R PNV+ YN+ +D L +A+ ++
Sbjct: 276 TYGSLINCL---GKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVIL 332
Query: 257 GEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS---GCGMNKAIFKLLVPFVCEK 313
+M + +PD+ TF LI G +EG++ +A+ + ++ N+ + L+ C +
Sbjct: 333 KQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMR 392
Query: 314 GDLDFAFNL 322
G+L A +L
Sbjct: 393 GELMAASDL 401
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 115/257 (44%), Gaps = 4/257 (1%)
Query: 25 GSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQK 84
G++I G+ + + +K ++ F + IY + L + ILE
Sbjct: 418 GALIHGLVVAGKVSEALIVREKMTERQVF-PDVNIYNVLISGLCKKHMLPAAKNILEEML 476
Query: 85 QYKDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKF 143
+ K++ + F A LI + ++ +ARK+F+ M + ++S NA++
Sbjct: 477 E-KNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMM 535
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT 203
E ++ K+G PD +Y T+I + +G+L+ A L +M K+ + +++T+++
Sbjct: 536 SEAILCMSNM-RKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSS 594
Query: 204 LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
L+ G+ G AE ++ M + PNV +Y + L + + +A M
Sbjct: 595 LINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNH 654
Query: 264 INPDVFTFYALIKGFVN 280
+P+ T + L+ G +
Sbjct: 655 CSPNDVTLHYLVNGLTS 671
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 100/243 (41%), Gaps = 9/243 (3%)
Query: 119 PGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGS 178
P R C AL+ A ++ + + + L + G P++ N ++K V++
Sbjct: 131 PTRAC------LGALVAAYADAGMLGKATDMCERLREQYGSLPEVTHCNRLLKLLVEQRR 184
Query: 179 LDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNA 238
D A L EM + D + L+ G GR + K+ E P+V YN
Sbjct: 185 WDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAGCIPHVVFYNV 244
Query: 239 RLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY---NKSG 295
+DG + L L+GEM +K P + T+ +LI +G+LE+ + K G
Sbjct: 245 LIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRG 304
Query: 296 CGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAK 355
N I+ ++ +C+ A + K+ F+ C D ++ L E V +A+
Sbjct: 305 LSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAE 364
Query: 356 ELV 358
+
Sbjct: 365 HFL 367
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 110/270 (40%), Gaps = 28/270 (10%)
Query: 40 LVDKFKKSSDLG------RFRTNTGIYTGTVQRLANAK---RFRWIEE---ILEHQKQYK 87
L+D F +S +LG F + G+ V A K +F + E + + ++
Sbjct: 490 LIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVG 549
Query: 88 DISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVD 147
I E +I+ Y K A + +M R C+ V+++++L+ + D +
Sbjct: 550 CIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAE 609
Query: 148 GLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLG 207
GLF ++ + + P++V+Y +I + K + A M + +T + L+ G
Sbjct: 610 GLFANMQAE-ALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNG 668
Query: 208 FYS------NGRFADAEKI---------WETMVNMNVRPNVRSYNARLDGLAIEKQTKKA 252
S N + ++ ++ +V P +YNA + L ++A
Sbjct: 669 LTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREA 728
Query: 253 LELVGEMRSKEINPDVFTFYALIKGFVNEG 282
L+ M K P+ TF +L+ GF + G
Sbjct: 729 LDFKNRMAKKGYVPNPITFLSLLYGFCSVG 758
>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
Length = 1023
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 121/254 (47%), Gaps = 4/254 (1%)
Query: 107 MFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSY 166
MFE A + F +M S N LL K D + FKD+ G +P + +Y
Sbjct: 78 MFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRFFKDMI-GAGSKPTVFTY 136
Query: 167 NTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVN 226
N +I +G +++A+ L EM+ +G+ D +T+N+++ G+ GR D +E M +
Sbjct: 137 NIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKS 196
Query: 227 MNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEE 286
M+ P+V +YN ++ + K LE EM+ + P+V ++ L+ F E +++
Sbjct: 197 MSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQ 256
Query: 287 AKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVD 343
A ++Y + G N+ + LV C+ G+L AF L + ++D
Sbjct: 257 ALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALID 316
Query: 344 RLAKELRVEEAKEL 357
L R++EA+EL
Sbjct: 317 GLCDVERIKEAEEL 330
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 103/190 (54%), Gaps = 1/190 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I YGK ++ F+EM +CE V+++N L+ K + F+++
Sbjct: 174 MIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQS- 232
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++P++VSY+T++ AF + + A +M + G+ + T+ +L+ + G +DA
Sbjct: 233 GLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDA 292
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ + M + V NV +Y A +DGL ++ K+A EL G+M + + P++ ++ ALI G
Sbjct: 293 FRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHG 352
Query: 278 FVNEGNLEEA 287
FV N++ A
Sbjct: 353 FVKAKNMDRA 362
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 120/273 (43%), Gaps = 5/273 (1%)
Query: 89 ISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDG 148
+ E L+ Y K +A ++ DEM E V+++ AL+ + ++ E +
Sbjct: 270 VPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEE 329
Query: 149 LFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
LF + G+ P+L SY +I FV ++D A LL EM+ +GI+ DL+ + T +
Sbjct: 330 LFGKMV-TAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSL 388
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDV 268
+ A+ + M ++ N Y +D + + L L+ EM +I
Sbjct: 389 CGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDIEVTA 448
Query: 269 FTFYALIKGFVNEGNLEEAKRWY----NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCK 324
TF LI G + +A ++ N G N AI+ ++ +C++ ++ A L +
Sbjct: 449 VTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAATTLFE 508
Query: 325 RTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
+ + + D+ ++D K+ V +A L
Sbjct: 509 QMAQKGLVPDRTAYTSLIDGKLKQGNVVQALAL 541
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 31/159 (19%), Positives = 70/159 (44%), Gaps = 3/159 (1%)
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
P ++ + +++ + A +M++ + + N LL F G+ ++
Sbjct: 61 PGFGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRF 120
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
++ M+ +P V +YN +D + E + A L EM+ + + PD T+ ++I G+
Sbjct: 121 FKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGK 180
Query: 281 EGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDL 316
G L++ ++ + C + + L+ C+ G L
Sbjct: 181 VGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKL 219
>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
sativus]
Length = 681
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 154/339 (45%), Gaps = 16/339 (4%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRF----RWIEEILE 81
+++ G+ E+ + +D F + R N +T + L R ++ ++E
Sbjct: 152 TLLHGLCVEDRVSEALDLFHQMC-----RPNVVTFTTLMNGLCREGRVVEAVALLDRMVE 206
Query: 82 HQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSK 141
Q I+ + + + RK+ +EM + + V+ ++A++
Sbjct: 207 DGLQPNQITYGTIVDGMCKIGDTVSALNLLRKM-EEM--SHIKPNVVIYSAIIDGLWKDG 263
Query: 142 KFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITF 201
+ + L+ ++ K GI PDL +YN +I F G A LL EM ++ I +++T+
Sbjct: 264 RHSDAHNLYTEMQEK-GIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTY 322
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS 261
+ L+ + +F +AE++++ M+ + PN +YN+ +DG + + A + M +
Sbjct: 323 SALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMAT 382
Query: 262 KEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDF 318
K +PDVFTF LI G+ +++ + ++G + + L+ C GDL+
Sbjct: 383 KGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNA 442
Query: 319 AFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
A +L ++ S D ++D L ++++A E+
Sbjct: 443 ALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEM 481
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 132/284 (46%), Gaps = 15/284 (5%)
Query: 86 YKDISKEGFTARLIA----LYGKAA--MFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
+ I+K GF ++ L+G A +F +M C V++F L+
Sbjct: 135 FGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQM----CRPNVVTFTTLMNGLCR 190
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKG-IRLDL 198
+ E L + G++P+ ++Y TI+ G SA LL +ME+ I+ ++
Sbjct: 191 EGRVVEAVALLDRMVED-GLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNV 249
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
+ ++ ++ G + +GR +DA ++ M + P++ +YN +DG + +A L+ E
Sbjct: 250 VIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQE 309
Query: 259 MRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGD 315
M ++INP+V T+ ALI +V E EA+ Y++ G N + ++ C++
Sbjct: 310 MLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNR 369
Query: 316 LDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
LD A ++ ++ C D ++D R+++ EL+
Sbjct: 370 LDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLH 413
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 119/289 (41%), Gaps = 45/289 (15%)
Query: 52 RFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENA 111
+ N Y+ + ++F EE+ + I +I + K + A
Sbjct: 314 KINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAA 373
Query: 112 RKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFK-------------------- 151
+F M + C V +FN L+ +K+ D+ L
Sbjct: 374 EHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHG 433
Query: 152 -----------DLPHKL---GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKK----- 192
DL ++ G+ PD+V+ NT++ D G L A + M+K
Sbjct: 434 FCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLD 493
Query: 193 ------GIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIE 246
G+ D+ T+N L+ G + G+F +AE++++ M + + PN +Y++ ++GL +
Sbjct: 494 ASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQ 553
Query: 247 KQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSG 295
+ +A ++ M SK +PDV TF L+ G+ G +++ + + G
Sbjct: 554 SRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMG 602
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 118/279 (42%), Gaps = 25/279 (8%)
Query: 26 SVIRGIYKENNLKRLVDKF------KKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEI 79
S+I G K+N L F S D+ F T Y G AKR E+
Sbjct: 359 SMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCG-------AKRIDDGTEL 411
Query: 80 LEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACV 138
L + ++ LI + A + +M +++ N LL G C
Sbjct: 412 LHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCD 471
Query: 139 NSKKFDEVDGLFKDLPHKL----------GIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
N K D ++ +FK + G+EPD+ +YN +I +++G A L E
Sbjct: 472 NGKLKDALE-MFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKE 530
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
M +GI + IT+++++ G R +A +++++M + + P+V ++N + G +
Sbjct: 531 MPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGR 590
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
LEL EM + I D T+ LI GF GN+ A
Sbjct: 591 VDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGA 629
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 128/293 (43%), Gaps = 12/293 (4%)
Query: 74 RWIEEILEHQKQYKDISKEGFTARLIAL---YGKAAMFENARKVFDEMPGRNCEQTVLSF 130
R I L + + + + GF + L + + E+A +F +M +V+ F
Sbjct: 21 RSIRHALAKKSRDGESGEAGFRGESLKLRSGFHEIKGLEDAIDLFSDMVRSRPLPSVIDF 80
Query: 131 NALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEME 190
N L+G V ++ D V L++ + K I D+ S+N +IK F L A + ++
Sbjct: 81 NKLMGVVVRMERPDLVISLYQKMERK-QIPCDVYSFNILIKCFCSCSKLPFALSTFGKIT 139
Query: 191 KKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTK 250
K G + D++TF+TLL G R ++A ++ M RPNV ++ ++GL E +
Sbjct: 140 KLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQM----CRPNVVTFTTLMNGLCREGRVV 195
Query: 251 KALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA----KRWYNKSGCGMNKAIFKLL 306
+A+ L+ M + P+ T+ ++ G G+ A ++ S N I+ +
Sbjct: 196 EAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAI 255
Query: 307 VPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ + + G A NL + D ++D R EA+ L++
Sbjct: 256 IDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQ 308
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 80/153 (52%), Gaps = 1/153 (0%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
F A +++ EMP R +++++++ + DE +F + K PD+V++N
Sbjct: 521 FLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSK-SFSPDVVTFN 579
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
T++ + G +D L EM ++GI D IT+ TL+ GF G A I++ M++
Sbjct: 580 TLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISS 639
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMR 260
V P+ + + L L +++ K+A+ ++ +++
Sbjct: 640 GVYPDTITIRSMLTVLWSKEELKRAVAMLEDLQ 672
>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g74580
gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 763
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/367 (22%), Positives = 155/367 (42%), Gaps = 43/367 (11%)
Query: 21 PKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEIL 80
PK + +VI+ +++ +K L + F F+ Y +++L +F +EE+L
Sbjct: 7 PKHVTAVIKC--QKDPMKAL-EMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVL 63
Query: 81 -EHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
+ ++ + EG + YG+ + A VF+ M +CE TV S+NA++ V+
Sbjct: 64 VDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVD 123
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
S FD+ ++ + + GI PD+ S+ +K+F +A LL M +G ++++
Sbjct: 124 SGYFDQAHKVYMRMRDR-GITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVV 182
Query: 200 TFNTLLLGFYSN-----------------------------------GRFADAEKIWETM 224
+ T++ GFY G + EK+ + +
Sbjct: 183 AYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKV 242
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
+ V PN+ +YN + GL + A+ +VG + + PDV T+ LI G
Sbjct: 243 IKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKF 302
Query: 285 EEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLV 341
+EA+ + K G + + L+ C+ G + A + + DQ + +
Sbjct: 303 QEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSL 362
Query: 342 VDRLAKE 348
+D L E
Sbjct: 363 IDGLCHE 369
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 99/196 (50%), Gaps = 1/196 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI M A ++ +EM + V +FN L+ + DGL K + K
Sbjct: 397 LIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISK- 455
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G PD+ ++N +I + + +++A +L M G+ D+ T+N+LL G +F D
Sbjct: 456 GYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDV 515
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ ++TMV PN+ ++N L+ L ++ +AL L+ EM++K +NPD TF LI G
Sbjct: 516 METYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDG 575
Query: 278 FVNEGNLEEAKRWYNK 293
F G+L+ A + K
Sbjct: 576 FCKNGDLDGAYTLFRK 591
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 125/263 (47%), Gaps = 4/263 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LIA Y K M + A ++ + ++ +L+ + + + LF + K
Sbjct: 327 LIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGK- 385
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
GI+P+++ YNT+IK ++G + A L EM +KG+ ++ TFN L+ G G +DA
Sbjct: 386 GIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDA 445
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ + + M++ P++ ++N + G + + + + ALE++ M ++PDV+T+ +L+ G
Sbjct: 446 DGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNG 505
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
E+ Y + GC N F +L+ +C LD A L + ++ D
Sbjct: 506 LCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPD 565
Query: 335 QAPLQLVVDRLAKELRVEEAKEL 357
++D K ++ A L
Sbjct: 566 AVTFGTLIDGFCKNGDLDGAYTL 588
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 127/270 (47%), Gaps = 10/270 (3%)
Query: 97 RLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPH 155
+L+ + K + K+ D++ R + ++N + G C + E+DG + +
Sbjct: 221 KLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLC----QRGELDGAVRMVGC 276
Query: 156 KL--GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
+ G +PD+++YN +I A L +M +G+ D T+NTL+ G+ G
Sbjct: 277 LIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGM 336
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
AE+I V P+ +Y + +DGL E +T +AL L E K I P+V +
Sbjct: 337 VQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNT 396
Query: 274 LIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSER 330
LIKG N+G + EA + N + G F +LV +C+ G + A L K S+
Sbjct: 397 LIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKG 456
Query: 331 CLVDQAPLQLVVDRLAKELRVEEAKELVEL 360
D +++ + +L++E A E++++
Sbjct: 457 YFPDIFTFNILIHGYSTQLKMENALEILDV 486
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 9/206 (4%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K + FE+ + + M + C + +FN LL + +K DE GL +++ +K + PD
Sbjct: 508 KTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNK-SVNPDA 566
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKK-GIRLDLITFNTLLLGFYSNGRFADAEKIWE 222
V++ T+I F G LD A TL +ME+ + T+N ++ F AEK+++
Sbjct: 567 VTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQ 626
Query: 223 TMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEG 282
MV+ + P+ +Y +DG + + EM P + T +I E
Sbjct: 627 EMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVE- 685
Query: 283 NLEEAKRWYNKSGCGMNKAIFKLLVP 308
R Y +G +++ + K LVP
Sbjct: 686 -----DRVYEAAGI-IHRMVQKGLVP 705
>gi|357138611|ref|XP_003570884.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Brachypodium distachyon]
Length = 864
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 129/268 (48%), Gaps = 6/268 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPH-- 155
++A + + + A ++ D M + V++FN + A + + E +F D+
Sbjct: 211 VVAGFCREGRVDEAERLVDRMRAQGLAPNVVTFNGRISALCKAGRVLEAYRIFNDMQEAW 270
Query: 156 KLGI-EPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRF 214
+ G+ PD V+++ ++ F D G +D A L+ M G + ++N L G NGR
Sbjct: 271 EQGLPRPDQVTFDVMLSGFCDAGMVDEATVLVDIMRCGGFLRKVESYNRWLSGLVKNGRV 330
Query: 215 ADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYAL 274
+A+++ M + V+PN +YN +DGL E + + +RS + PDV T+ +L
Sbjct: 331 GEAQELLSEMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRRVEDFVRSGVMTPDVVTYTSL 390
Query: 275 IKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERC 331
+ + ++GN A R + + GC N + +L+ + + G L +R +
Sbjct: 391 LHAYCSKGNTTAANRILDEMAQKGCAPNLFTYNVLLQSLLKAGRTTEVERLLERMSEKGY 450
Query: 332 LVDQAPLQLVVDRLAKELRVEEAKELVE 359
+D A +++D L + ++E A ++V+
Sbjct: 451 SLDTASCNIIIDGLCRNSKLEMAMDIVD 478
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 130/312 (41%), Gaps = 67/312 (21%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALL------------------------------------ 134
A ++ DEM + C + ++N LL
Sbjct: 403 ANRILDEMAQKGCAPNLFTYNVLLQSLLKAGRTTEVERLLERMSEKGYSLDTASCNIIID 462
Query: 135 GACVNSK---KFDEVDGLFKD---LPHKLG---------------IEPDLVSYNTIIKAF 173
G C NSK D VDG++ + +LG PD ++Y+T++ A
Sbjct: 463 GLCRNSKLEMAMDIVDGMWNEGRLALRRLGNSFVSLVSDSSISKSCLPDRITYSTLMNAL 522
Query: 174 VDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNV 233
+G D A L EM K I D + ++T + G+ +G+ + A K+ M + P+
Sbjct: 523 CKEGRFDEAKKKLVEMIGKDISPDSVIYDTFIHGYCMHGKTSLAIKVLRDMEKRSCNPST 582
Query: 234 RSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN- 292
RSYN + G ++++ + L+L+ EM+ K I+ +V T+ +LIK F G + +A +
Sbjct: 583 RSYNLLIWGFQEKQKSDEILKLMSEMKEKGISSNVMTYNSLIKSFCGRGMVNKAMPLLDE 642
Query: 293 --KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFS---ERCLVDQAPLQLVVDRLAK 347
++ N F LL+ C+ D F+ +R F C + L+ L+
Sbjct: 643 MLQNEIVPNVTSFGLLIKAFCKTAD----FSAAQRVFDVALSTCGQKEVLYCLMCTELST 698
Query: 348 ELRVEEAKELVE 359
R EAK ++E
Sbjct: 699 YARWIEAKNILE 710
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 116/285 (40%), Gaps = 42/285 (14%)
Query: 114 VFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLG--IEPDLVSYNTIIK 171
V D ++C ++++ L+ A +FDE K L +G I PD V Y+T I
Sbjct: 499 VSDSSISKSCLPDRITYSTLMNALCKEGRFDEAK---KKLVEMIGKDISPDSVIYDTFIH 555
Query: 172 AFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRP 231
+ G A +L +MEK+ ++N L+ GF + + K+ M +
Sbjct: 556 GYCMHGKTSLAIKVLRDMEKRSCNPSTRSYNLLIWGFQEKQKSDEILKLMSEMKEKGISS 615
Query: 232 NVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY 291
NV +YN+ + KA+ L+ EM EI P+V +F LIK F + A+R +
Sbjct: 616 NVMTYNSLIKSFCGRGMVNKAMPLLDEMLQNEIVPNVTSFGLLIKAFCKTADFSAAQRVF 675
Query: 292 NK--SGCGMNKAIFKLLV-----------------------------PF------VCEKG 314
+ S CG + ++ L+ P+ +C+
Sbjct: 676 DVALSTCGQKEVLYCLMCTELSTYARWIEAKNILETALEMRISIQSFPYKRIIAGLCDVS 735
Query: 315 DLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ D A +L K ++ D A V+D L++ + +A L E
Sbjct: 736 EADHAHSLLKLFIAKGYSFDPATFMPVIDALSESGKKHDADMLSE 780
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 83/370 (22%), Positives = 141/370 (38%), Gaps = 75/370 (20%)
Query: 44 FKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTA------R 97
F+ LG T +Y + R +E + YKD+ G T
Sbjct: 95 FRSLRALGGAAPPTPVYNRLLLAALREDRLDLVEAL------YKDLLLAGATPDVFTRNA 148
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL---GACVNSKKFDEVDGLFKDLP 154
L+ A + AR+VFD MP RN F++ + G C + D + + +P
Sbjct: 149 LLEALSAAGRMDLARRVFDAMPARN------EFSSGILARGYCRAGRSADAL-AVLDAMP 201
Query: 155 HKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR- 213
E +LV NT++ F +G +D A L+ M +G+ +++TFN + GR
Sbjct: 202 -----EMNLVVCNTVVAGFCREGRVDEAERLVDRMRAQGLAPNVVTFNGRISALCKAGRV 256
Query: 214 ------FADAEKIWETMVNMNVRPN----------------------------------- 232
F D ++ WE + RP+
Sbjct: 257 LEAYRIFNDMQEAWEQGLP---RPDQVTFDVMLSGFCDAGMVDEATVLVDIMRCGGFLRK 313
Query: 233 VRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW-- 290
V SYN L GL + +A EL+ EM + + P+ +T+ ++ G EG + +R
Sbjct: 314 VESYNRWLSGLVKNGRVGEAQELLSEMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRRVED 373
Query: 291 YNKSGCGMNKAI-FKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKEL 349
+ +SG + + L+ C KG+ A + + C + +++ L K
Sbjct: 374 FVRSGVMTPDVVTYTSLLHAYCSKGNTTAANRILDEMAQKGCAPNLFTYNVLLQSLLKAG 433
Query: 350 RVEEAKELVE 359
R E + L+E
Sbjct: 434 RTTEVERLLE 443
>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 935
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 147/337 (43%), Gaps = 11/337 (3%)
Query: 27 VIRGIYKENNLKR---LVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQ 83
+I G +E+N+ R L+D+ +K + + Y + L + K ++LE
Sbjct: 320 LIEGYCREHNMGRALELLDEMEKRN----LVPSAVSYGAMINGLCHCKDLSLANKLLEKM 375
Query: 84 KQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKF 143
+ LI Y E AR++ D M + +NA++ + K
Sbjct: 376 TFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKM 435
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT 203
+E ++ + G++PD V++ I + G + A EM G+ + +
Sbjct: 436 EEASTYLLEIQGR-GLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTV 494
Query: 204 LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
L+ G + G +A I+ + + V P+V++ +A + GL + ++AL++ E++ K
Sbjct: 495 LINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKG 554
Query: 264 INPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAF 320
+ PDVFT+ +LI GF +G +E+A +++ G N I+ LV +C+ GD+ A
Sbjct: 555 LVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRAR 614
Query: 321 NLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
L + D ++D K V EA L
Sbjct: 615 KLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSL 651
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 130/287 (45%), Gaps = 9/287 (3%)
Query: 74 RWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNAL 133
++ +E+L+H + LI + KA A +F + V + +A
Sbjct: 475 KYFDEMLDHGL----MPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAF 530
Query: 134 LGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKG 193
+ + + + E +F +L K G+ PD+ +Y+++I F +G ++ A L EM KG
Sbjct: 531 IHGLLKNGRVQEALKVFSELKEK-GLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKG 589
Query: 194 IRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKAL 253
I ++ +N L+ G +G A K+++ M + P+ +Y+ +DG + +A
Sbjct: 590 IAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAF 649
Query: 254 ELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFV 310
L EM SK + P F + AL+ G EG++E+A + + G + F L+
Sbjct: 650 SLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLS-FNTLIDGY 708
Query: 311 CEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
C+ + A L + +++ + D V+D K ++EEA L
Sbjct: 709 CKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLL 755
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 118/260 (45%), Gaps = 4/260 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI K E A ++ M C+ +F L+ L ++ K
Sbjct: 285 LIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEM-EKR 343
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
+ P VSY +I L AN LL +M G++ +++ ++TL++G+ S GR +A
Sbjct: 344 NLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEA 403
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ + M V P++ YNA + L+ + ++A + E++ + + PD TF A I G
Sbjct: 404 RRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILG 463
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
+ G + EA +++++ G N ++ +L+ + G+L A ++ + + L D
Sbjct: 464 YSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPD 523
Query: 335 QAPLQLVVDRLAKELRVEEA 354
+ L K RV+EA
Sbjct: 524 VQTCSAFIHGLLKNGRVQEA 543
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 108/229 (47%), Gaps = 4/229 (1%)
Query: 129 SFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
++ + +K+ +E F+++ K G++PD + + +I F+ +G +D +
Sbjct: 211 TYTIITAGLCRAKRMNEAKLTFEEM-QKTGLKPDYNACSALIDGFMREGDIDEVLRIKDV 269
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
M GI ++LIT+N L+ G G+ A +I + M+ + +PN R++ ++G E
Sbjct: 270 MVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHN 329
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKL 305
+ALEL+ EM + + P ++ A+I G + +L A + K SG N ++
Sbjct: 330 MGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYST 389
Query: 306 LVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA 354
L+ +G ++ A L D ++ L+K ++EEA
Sbjct: 390 LIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEA 438
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 114/268 (42%), Gaps = 14/268 (5%)
Query: 40 LVDKFKKSSDLGRFR------TNTGIYTGTVQRLANAKRFRWIEEILE-----HQKQYKD 88
LVD KS D+ R R G+ +V + E + E H+ K
Sbjct: 600 LVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKG 659
Query: 89 ISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVD 147
+ F L+ K E A +F EM + T LSFN L+ S K E
Sbjct: 660 VQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEAS 718
Query: 148 GLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLG 207
LF+++ K I PD V+Y T+I G ++ AN L EM+++ + +D +T+ +L+ G
Sbjct: 719 QLFQEMIAK-QIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYG 777
Query: 208 FYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPD 267
+ G+ ++ ++E MV V+P+ +Y + E +A +L E+ K +
Sbjct: 778 YNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTK 837
Query: 268 VFTFYALIKGFVNEGNLEEAKRWYNKSG 295
LI +L EA + ++ G
Sbjct: 838 GTIHDLLITALCKREDLTEASKLLDEMG 865
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 13/210 (6%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ P+ +Y I ++ A EM+K G++ D + L+ GF G +
Sbjct: 204 GLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEV 263
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+I + MV+ + N+ +YN + GL + +KA E++ M + P+ TF LI+G
Sbjct: 264 LRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEG 323
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLC-KRTFSERCLV 333
+ E N+ A + K + + ++ +C DL A L K TFS
Sbjct: 324 YCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFS----- 378
Query: 334 DQAPLQLVVDRL----AKELRVEEAKELVE 359
P +V L A E R+EEA+ L++
Sbjct: 379 GLKPNVVVYSTLIMGYASEGRIEEARRLLD 408
>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
Length = 582
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 140/304 (46%), Gaps = 4/304 (1%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMP 119
YTG + L R ++L + + L++ K + +A K+ M
Sbjct: 176 YTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMI 235
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL-PHKLGIEPDLVSYNTIIKAFVDKGS 178
+ + V+++N L+ + K DE LF + ++ +EP++ ++N +I +G
Sbjct: 236 EKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGR 295
Query: 179 LDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNA 238
L A + +M KKG +L+T+N LL G G+ +A ++W+ ++++ PN +Y+
Sbjct: 296 LTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSI 355
Query: 239 RLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSG--- 295
+DG + A L EMR+ +NP +F + L+ EG+LE+AK + + G
Sbjct: 356 LIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNAN 415
Query: 296 CGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAK 355
C + F ++ + GD F L + D +++RL+K ++EAK
Sbjct: 416 CEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAK 475
Query: 356 ELVE 359
+E
Sbjct: 476 SALE 479
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 127/277 (45%), Gaps = 10/277 (3%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
KA + A + EM C ++ L+ + DE L + + K G + D+
Sbjct: 45 KAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKK-GFDADV 103
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
V Y T+I F + G+LD L EM KGI +++T++ L+ G G++ +A +
Sbjct: 104 VLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNA 163
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M + P+V +Y +DGL + + A++L+ M K P T+ L+ G EG
Sbjct: 164 MAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGL 223
Query: 284 LEEA---KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTF-SERCLVDQA-PL 338
+ +A R + G + + L+ +C+KG +D A L F +E CL
Sbjct: 224 VIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTF 283
Query: 339 QLVVDRLAKELRVEEA----KELVELGKTNSYCRYNL 371
+++ L KE R+ +A +++V+ G + YN+
Sbjct: 284 NMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNM 320
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 122/256 (47%), Gaps = 5/256 (1%)
Query: 105 AAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLV 164
+FE A + EM ++ ++S+N L+ +KK E GL ++ G P+ V
Sbjct: 12 GGVFE-AMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEM-EAAGCFPNSV 69
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
+ T++ G +D A LL M+KKG D++ + TL+ GF +NG +++++ M
Sbjct: 70 TCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEM 129
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
+ + NV +Y+ + GL Q K+A ++ M I+PDV T+ LI G +G
Sbjct: 130 LGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRA 189
Query: 285 EEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLV 341
A N + G + + +L+ +C++G + AF + + + D +
Sbjct: 190 THAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTL 249
Query: 342 VDRLAKELRVEEAKEL 357
+ L + +V+EA +L
Sbjct: 250 MKGLCDKGKVDEALKL 265
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 93/212 (43%), Gaps = 7/212 (3%)
Query: 167 NTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVN 226
N ++K G + A L+ EM +K + D++++NTL+ G + +A + M
Sbjct: 2 NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 61
Query: 227 MNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEE 286
PN + +DGL + + +A+EL+ M+ K + DV + LI GF N GNL+
Sbjct: 62 AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDR 121
Query: 287 AKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVD 343
K +++ G N + LV +C G A + D ++D
Sbjct: 122 GKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLID 181
Query: 344 RLAKELRVEEAKEL----VELGKTNSYCRYNL 371
L K+ R A +L VE G+ S YN+
Sbjct: 182 GLCKDGRATHAMDLLNLMVEKGEEPSNVTYNV 213
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 108/242 (44%), Gaps = 14/242 (5%)
Query: 27 VIRGIYKENNLKRLVD---KFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQ 83
+I G+ KE L + V K K G T + G + + I+E +E
Sbjct: 286 LIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCL-------KAGKIKEAMELW 338
Query: 84 KQYKDIS--KEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNS 140
KQ D+ FT + LI + K M A+ +F EM + +N L+ +
Sbjct: 339 KQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKE 398
Query: 141 KKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLIT 200
++ LF+++ + EPD++S+NT+I + G L +M + G+R D +T
Sbjct: 399 GSLEQAKSLFQEMGNA-NCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALT 457
Query: 201 FNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMR 260
F+TL+ G +A+ E MV P+ Y++ L GL+ + T + + L+ +M
Sbjct: 458 FSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMA 517
Query: 261 SK 262
+K
Sbjct: 518 AK 519
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 107/255 (41%), Gaps = 43/255 (16%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL---- 153
LI K A K+ +M + ++++N LLG C+ + K E L+K +
Sbjct: 286 LIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLG 345
Query: 154 --PHKL----------------------------GIEPDLVSYNTIIKAFVDKGSLDSAN 183
P+ G+ P L YNT++ + +GSL+ A
Sbjct: 346 FVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAK 405
Query: 184 TLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNA---RL 240
+L EM D+I+FNT++ G G F +++ MV M +RP+ +++ RL
Sbjct: 406 SLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRL 465
Query: 241 DGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCG 297
L + K ALE M + PD + +L+KG ++G+ E ++ G
Sbjct: 466 SKLGELDEAKSALE---RMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTV 522
Query: 298 MNKAIFKLLVPFVCE 312
+++ I ++ +C
Sbjct: 523 LDRKIVSTILTCLCH 537
>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 146/334 (43%), Gaps = 11/334 (3%)
Query: 27 VIRGIYKENNLKR---LVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQ 83
+I G +E+N+ R L+D+ +K + + Y + L + K ++LE
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRN----LVPSAVSYGAMINGLCHCKDLSLANKLLEKM 176
Query: 84 KQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKF 143
+ LI Y E AR++ D M + +NA++ + K
Sbjct: 177 TFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKM 236
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT 203
+E ++ + G++PD V++ I + G + A EM G+ + +
Sbjct: 237 EEASTYLLEIQGR-GLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTV 295
Query: 204 LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
L+ G + G +A I+ + + V P+V++ +A + GL + ++AL++ E++ K
Sbjct: 296 LINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKG 355
Query: 264 INPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAF 320
+ PDVFT+ +LI GF +G +E+A +++ G N I+ LV +C+ GD+ A
Sbjct: 356 LVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRAR 415
Query: 321 NLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA 354
L + D ++D K V EA
Sbjct: 416 KLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEA 449
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 130/289 (44%), Gaps = 13/289 (4%)
Query: 74 RWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNAL 133
++ +E+L+H + LI + KA A +F + V + +A
Sbjct: 276 KYFDEMLDHGL----MPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAF 331
Query: 134 LGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKG 193
+ + + + E +F +L K G+ PD+ +Y+++I F +G ++ A L EM KG
Sbjct: 332 IHGLLKNGRVQEALKVFSELKEK-GLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKG 390
Query: 194 IRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKAL 253
I ++ +N L+ G +G A K+++ M + P+ +Y+ +DG + +A
Sbjct: 391 IAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAF 450
Query: 254 ELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKAI-----FKLLVP 308
L EM SK + P F + AL+ G EG++E+A + + + K F L+
Sbjct: 451 SLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREM---LQKGFATTLSFNTLID 507
Query: 309 FVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
C+ + A L + +++ + D V+D K ++EEA L
Sbjct: 508 GYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLL 556
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 108/229 (47%), Gaps = 4/229 (1%)
Query: 129 SFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
++ + +K+ +E F+++ K G++PD + + +I F+ +G +D +
Sbjct: 12 TYTIITAGLCRAKRMNEAKLTFEEM-QKTGLKPDYNACSALIDGFMREGDIDEVLRIKDV 70
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
M GI ++LIT+N L+ G G+ A +I + M+ + +PN R++ ++G E
Sbjct: 71 MVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHN 130
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKL 305
+ALEL+ EM + + P ++ A+I G + +L A + K SG N ++
Sbjct: 131 MGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYST 190
Query: 306 LVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA 354
L+ +G ++ A L D ++ L+K ++EEA
Sbjct: 191 LIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEA 239
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 111/281 (39%), Gaps = 31/281 (11%)
Query: 40 LVDKFKKSSDLGRFR------TNTGIYTGTVQRLANAKRFRWIEEILE-----HQKQYKD 88
LVD KS D+ R R G+ +V + E + E H+ K
Sbjct: 401 LVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKG 460
Query: 89 ISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVD 147
+ F L+ K E A +F EM + T LSFN L+ S K E
Sbjct: 461 VQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEAS 519
Query: 148 GLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEK---------------- 191
LF+++ K I PD V+Y T+I G ++ AN L EM++
Sbjct: 520 QLFQEMIAK-QIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMV 578
Query: 192 -KGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTK 250
KG++ D +T+ ++ +A K+ + +V + ++ + L +
Sbjct: 579 AKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLT 638
Query: 251 KALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY 291
+A +L+ EM + P + L++ F G ++EA R +
Sbjct: 639 EASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVF 679
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 13/210 (6%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ P+ +Y I ++ A EM+K G++ D + L+ GF G +
Sbjct: 5 GLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEV 64
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+I + MV+ + N+ +YN + GL + +KA E++ M + P+ TF LI+G
Sbjct: 65 LRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEG 124
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLC-KRTFSERCLV 333
+ E N+ A + K + + ++ +C DL A L K TFS
Sbjct: 125 YCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFS----- 179
Query: 334 DQAPLQLVVDRL----AKELRVEEAKELVE 359
P +V L A E R+EEA+ L++
Sbjct: 180 GLKPNVVVYSTLIMGYASEGRIEEARRLLD 209
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/224 (19%), Positives = 98/224 (43%), Gaps = 21/224 (9%)
Query: 86 YKDISKEGFTARL-----IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNS 140
++++ ++GF L I Y K+ + A ++F EM + +++ ++ +
Sbjct: 488 FREMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKA 547
Query: 141 KKFDEVDGLFKDLPHK----------------LGIEPDLVSYNTIIKAFVDKGSLDSANT 184
K +E + LFK++ + G++PD V+Y +I A + +L A
Sbjct: 548 GKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFK 607
Query: 185 LLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLA 244
L E+ KG+ + L+ +A K+ + M + ++P++ + + +
Sbjct: 608 LRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFH 667
Query: 245 IEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
+ +A + ++S + PD T L+ G +N+ + E+A+
Sbjct: 668 EAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDAR 711
>gi|255581046|ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529061|gb|EEF31046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 630
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 164/362 (45%), Gaps = 22/362 (6%)
Query: 34 ENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEG 93
+ N +LV+ + + + + ++ L A + R ++E Y + E
Sbjct: 170 DGNKLKLVENVHSTMVSKGIKPDVSTFNILIKALCKAHQIRPAILVMEEMSSYGLVPDEK 229
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE----VDGL 149
L+ + + + A +V ++M C T ++ N L+ + +E +D +
Sbjct: 230 TFTTLMQGFIEEGNMDGAFRVKEQMLDAGCPVTNVTVNVLVHGFCKEGRIEEALSFIDEM 289
Query: 150 FKDLPHKLGIE-----------PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL 198
+ H + IE PD +YN +I + +G L A LL EME G ++
Sbjct: 290 SNEGKHTMAIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNV 349
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
IT+NTL+ GF N + +AE+I++ M + N +YN +DGL ++ ++A +L+ +
Sbjct: 350 ITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQ 409
Query: 259 MRSKEINPDVFTFYALIKGFVNEGNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKGD 315
M + + PD FT+ +++ F EG++++A + +GC + + L+ +C+ G
Sbjct: 410 MIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGR 469
Query: 316 LDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA----KELVELGKTNSYCRYNL 371
++ A L + + ++ V+ L K R +EA +E+ E G T Y +
Sbjct: 470 VEVASRLLRSIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFTYKI 529
Query: 372 KF 373
F
Sbjct: 530 VF 531
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 138/327 (42%), Gaps = 21/327 (6%)
Query: 53 FRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENAR 112
FR N+ IY +++L F +++IL+ K G I Y K ++E
Sbjct: 83 FRPNSSIYEEILRKLGKVGSFNSMKDILQEMKGLDCQIDRGVLLIFIDSYAKFELYEEIL 142
Query: 113 KVFDEMPGR-NCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIK 171
+ + M L +N LL V+ K V+ + + K GI+PD+ ++N +IK
Sbjct: 143 CIVEVMEVEFGLALDTLLYNFLLNVLVDGNKLKLVENVHSTMVSK-GIKPDVSTFNILIK 201
Query: 172 AFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV-- 229
A + A ++ EM G+ D TF TL+ GF G A ++ E M++
Sbjct: 202 ALCKAHQIRPAILVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAGCPV 261
Query: 230 --------------RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
+ + +D ++ E + A+EL EM++K PD FT+ LI
Sbjct: 262 TNVTVNVLVHGFCKEGRIEEALSFIDEMSNEGKHTMAIELYNEMKNKGCQPDEFTYNMLI 321
Query: 276 KGFVNEGNLEEA---KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCL 332
G L+EA R SGC N + L+ C+ ++ A + + +
Sbjct: 322 DSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLS 381
Query: 333 VDQAPLQLVVDRLAKELRVEEAKELVE 359
+ ++D L K RV+EA +L++
Sbjct: 382 RNSVTYNTLIDGLCKSRRVQEAAQLMD 408
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 90/185 (48%), Gaps = 1/185 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K E A ++FD+M + + +++N L+ S++ E L + +
Sbjct: 355 LIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIME- 413
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD +YN+++ F +G + A ++ M G D++T+ TL+ G GR A
Sbjct: 414 GLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVA 473
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ ++ + +YN + L K+TK+A+ L EM K PD FT+ + +G
Sbjct: 474 SRLLRSIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFTYKIVFRG 533
Query: 278 FVNEG 282
N G
Sbjct: 534 LSNSG 538
>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
Length = 577
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 114/218 (52%), Gaps = 7/218 (3%)
Query: 160 EPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEK 219
+PD+ +Y+ +I A +LD+A LL EM++K I ++ T+N+L+ G G++ +
Sbjct: 200 KPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKT 259
Query: 220 IWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFV 279
+ MVN+N+ PNV +++ +DGL E + + A E++ M K + PD+ T+ A++ G+
Sbjct: 260 LLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYC 319
Query: 280 NEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQA 336
G ++ A+R +N G N + +L+ C+K +L A L + D
Sbjct: 320 LRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTV 379
Query: 337 PLQLVVDRLAKELRVEEAK----ELVELGKTNSYCRYN 370
++ L + R+ +AK E++ +G T C ++
Sbjct: 380 TYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHS 417
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 145/296 (48%), Gaps = 15/296 (5%)
Query: 8 LSCSFSTTAT--ATGPKF----IGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYT 61
+ C+FS TG F +++ G++ EN + V FKK N +Y
Sbjct: 113 IDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKICEPNEVMY- 171
Query: 62 GTV----QRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDE 117
GTV + + ++ + I+E D+ +I K + A + +E
Sbjct: 172 GTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSI---VIDALCKDINLDAAINLLNE 228
Query: 118 MPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKG 177
M +N + ++N+L+ ++++V L ++ + L I P++ +++ +I +G
Sbjct: 229 MKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVN-LNINPNVHTFSILIDGLCKEG 287
Query: 178 SLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYN 237
++ A+ ++ M +KG+ D+IT++ ++ G+ G+ A +++ + + ++PN+ SY+
Sbjct: 288 KVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYS 347
Query: 238 ARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK 293
++G +K KA++L GE+ K + PD T+ ++ G + G + +AK+ +++
Sbjct: 348 ILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDE 403
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 94/196 (47%), Gaps = 3/196 (1%)
Query: 127 VLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLL 186
V++FN LLG K + LFK L + EP+ V Y T++ +G + +LL
Sbjct: 132 VVTFNTLLGGLFAENKVTDAVVLFKKLVREKICEPNEVMYGTVMNGLSKRGHTEKTLSLL 191
Query: 187 YEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIE 246
ME+ + D+ T++ ++ + A + M N+ PN+ +YN+ +DGL
Sbjct: 192 RIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKL 251
Query: 247 KQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK---RWYNKSGCGMNKAIF 303
Q +K L+ EM + INP+V TF LI G EG +E+A R + G + +
Sbjct: 252 GQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITY 311
Query: 304 KLLVPFVCEKGDLDFA 319
++ C +G +D A
Sbjct: 312 SAIMDGYCLRGQVDRA 327
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 124/266 (46%), Gaps = 8/266 (3%)
Query: 48 SDLGRFRTNTGIYTGTV--QRLANAKRFRWIEEILEHQKQYKDISKEGFT-ARLIALYGK 104
S++ N ++T ++ L + +E++ H + K + + T + ++ Y
Sbjct: 262 SEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIE-KGVEPDIITYSAIMDGYCL 320
Query: 105 AAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLV 164
+ AR+VF+ + + + + S++ L+ K + LF ++ K G++PD V
Sbjct: 321 RGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQK-GLKPDTV 379
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
+Y+TI+ ++ G + A + EM + G D+ +TLL G++ G +A ++ +
Sbjct: 380 TYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKL 439
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
N+ Y ++GL + ++A + ++ S + PDV T+ +I GF EG
Sbjct: 440 ERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLF 499
Query: 285 EEAK---RWYNKSGCGMNKAIFKLLV 307
+E K R +GC N + +++
Sbjct: 500 DEVKGILRKMEDNGCPANNITYNVIM 525
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 125/293 (42%), Gaps = 40/293 (13%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
+ + ++A +F M +V+ F+ L +N K + V LF+++ LGI
Sbjct: 39 EVSCLDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREM-RILGIPISD 97
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA------ 217
N + ++ + +D A ++L K GI +++TFNTLL G ++ + DA
Sbjct: 98 SILNIVTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKK 157
Query: 218 ---EKIWE---------------------------TMVNMNVRPNVRSYNARLDGLAIEK 247
EKI E M N +P+VR+Y+ +D L +
Sbjct: 158 LVREKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDI 217
Query: 248 QTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS---GCGMNKAIFK 304
A+ L+ EM+ K I P++FT+ +LI G G E+ K ++ N F
Sbjct: 218 NLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFS 277
Query: 305 LLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
+L+ +C++G ++ A + + + D ++D +V+ A+ +
Sbjct: 278 ILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRV 330
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 94/200 (47%), Gaps = 6/200 (3%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
+I G K+ NL + + F + S G + +T Y+ + L R ++I + +
Sbjct: 349 LINGYCKKKNLAKAMQLFGEISQKG-LKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRV 407
Query: 87 KDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL--GACVNSKKFD 144
+ L+ Y K + E A +F ++ RN E T +SF ++ G C N +
Sbjct: 408 GPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLE-RNREDTNISFYTVVINGLCKNDR-VR 465
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
E +F+ LP +G+ PD+ +YN +I F +G D +L +ME G + IT+N +
Sbjct: 466 EAHAIFEKLP-SIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVI 524
Query: 205 LLGFYSNGRFADAEKIWETM 224
+ GF+ + + ++ + M
Sbjct: 525 MQGFFRSNKISEIVSFMKEM 544
>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g31850, chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 130/299 (43%), Gaps = 39/299 (13%)
Query: 99 IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLG 158
I + G+A + A ++F M C ++++ L+ A N+ + + LF + G
Sbjct: 269 IRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKAN-G 327
Query: 159 IEPDLVSYNTIIKAFVDKGSLDSANTLLYEME---------------------------- 190
+PD V Y T++ F D G LD+ +ME
Sbjct: 328 HKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAF 387
Query: 191 -------KKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
K+GI +L T+NTL+ G GR DA K+ +TM ++ V+P +Y +D
Sbjct: 388 ATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYF 447
Query: 244 AIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNK 300
+T KA+E +M++K I P++ A + G L EAK +N ++G +
Sbjct: 448 GKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDS 507
Query: 301 AIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ +++ + G +D A NL C D + ++D L K RV+EA ++ +
Sbjct: 508 VTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFD 566
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 100/195 (51%), Gaps = 1/195 (0%)
Query: 99 IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLG 158
I +GK+ A + F++M + +++ NA L + + E +F L G
Sbjct: 444 IDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLREN-G 502
Query: 159 IEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAE 218
+ PD V+YN ++K + G +D A LL EM + G D+I N+L+ Y GR +A
Sbjct: 503 LAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAW 562
Query: 219 KIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGF 278
++++ M +M + P V +YN L GL E + +KA+EL M K+ +P+ +F L+ F
Sbjct: 563 QMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCF 622
Query: 279 VNEGNLEEAKRWYNK 293
+E A + ++K
Sbjct: 623 CKNDEVELALKMFSK 637
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 106/229 (46%), Gaps = 7/229 (3%)
Query: 149 LFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
+F KLGI P L SYN +I ++ + A L +M+ G D TFN LL
Sbjct: 774 IFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVH 833
Query: 209 YSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDV 268
+G+ + ++++ M++ +P+ +YN + LA KAL+ ++ S + P
Sbjct: 834 GKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTP 893
Query: 269 FTFYALIKGFVNEGNLEEAKRWYNKS---GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKR 325
T+ LI G G LEEA R + + GC N AIF +L+ + GD + A L KR
Sbjct: 894 RTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKR 953
Query: 326 TFSERCLVDQAPLQLVVDRLAKELRVEEA----KELVELGKTNSYCRYN 370
+E D ++VD L RV+EA EL G + YN
Sbjct: 954 MVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYN 1002
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 94/196 (47%), Gaps = 1/196 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+A++GK+ +++ EM R C+ +++N ++ + S D+ F DL
Sbjct: 829 LLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSS- 887
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
P +Y +I G L+ A L EM G + + FN L+ G+ G A
Sbjct: 888 DFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETA 947
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++++ MVN +RP+++SY +D L + + +AL E++S ++PD + +I G
Sbjct: 948 CQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIING 1007
Query: 278 FVNEGNLEEAKRWYNK 293
+EEA YN+
Sbjct: 1008 LGKSQRMEEALALYNE 1023
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 108/250 (43%), Gaps = 6/250 (2%)
Query: 27 VIRGIYKENNLKRLVDKFKK--SSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQK 84
VI + K NNL + +D F SSD FR Y + LA R + E
Sbjct: 864 VISSLAKSNNLDKALDFFYDLVSSD---FRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMS 920
Query: 85 QYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
Y LI YGK E A ++F M + S+ L+ + + D
Sbjct: 921 DYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVD 980
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
E F +L G++PD ++YN II ++ A L EM +GI DL T+N+L
Sbjct: 981 EALYYFNELKST-GLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSL 1039
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+L G A++++E + + P+V +YNA + G ++ + + A + M
Sbjct: 1040 MLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGC 1099
Query: 265 NPDVFTFYAL 274
NP++ T+ L
Sbjct: 1100 NPNIGTYAQL 1109
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 97/212 (45%), Gaps = 4/212 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI K E A ++F+EM C+ FN L+ + LFK + ++
Sbjct: 899 LIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNE- 957
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
GI PDL SY ++ G +D A E++ G+ D I +N ++ G + R +A
Sbjct: 958 GIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEA 1017
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ M N + P++ +YN+ + L + ++A + E++ + PDVFT+ ALI+G
Sbjct: 1018 LALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRG 1077
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLL 306
+ N E A Y GC N + L
Sbjct: 1078 YSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 97/181 (53%), Gaps = 4/181 (2%)
Query: 142 KFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITF 201
K +++ +F+ + K+ I DL +Y TI KA +G L T+L +M K G L+ ++
Sbjct: 137 KVEDMAAVFEFMQKKI-IRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSY 195
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS 261
N L+ +G +A +++ MV+ ++P++++Y+A + L ++ ++ + L+ EM
Sbjct: 196 NGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMED 255
Query: 262 KEINPDVFTFYALIKGFVNEGNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDF 318
+ P+V+TF I+ G ++EA R + GCG + + +L+ +C G L+
Sbjct: 256 LGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLEN 315
Query: 319 A 319
A
Sbjct: 316 A 316
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 88/185 (47%), Gaps = 1/185 (0%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
E A +F +M C +FN LL S K E+ L+K++ + +PD ++YN
Sbjct: 805 EKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISR-RCKPDAITYNI 863
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
+I + +LD A Y++ R T+ L+ G GR +A +++E M +
Sbjct: 864 VISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYG 923
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
+PN +N ++G T+ A +L M ++ I PD+ ++ L+ G ++EA
Sbjct: 924 CKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEAL 983
Query: 289 RWYNK 293
++N+
Sbjct: 984 YYFNE 988
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 138/318 (43%), Gaps = 21/318 (6%)
Query: 52 RFRTNTGIYT----GTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAM 107
RFR N + GT+ K + EE++ + +D F L+ + K
Sbjct: 712 RFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICRED----SFLIPLVRVLCKHKR 767
Query: 108 FENARKVFDEMPGR-NCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSY 166
A ++FD+ + T+ S+N L+G + ++ LFKD+ + +G PD ++
Sbjct: 768 ELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKN-VGCAPDAFTF 826
Query: 167 NTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVN 226
N ++ G + L EM + + D IT+N ++ + A + +V+
Sbjct: 827 NMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVS 886
Query: 227 MNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEE 286
+ RP R+Y +DGLA + ++A+ L EM P+ F LI G+ G+ E
Sbjct: 887 SDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTET 946
Query: 287 A----KRWYNKSGCGMNKAIFKLLVPFVCEKGDLD---FAFNLCKRTFSERCLVDQAPLQ 339
A KR N+ G + + +LV +C G +D + FN K T + D
Sbjct: 947 ACQLFKRMVNE-GIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDP---DFIAYN 1002
Query: 340 LVVDRLAKELRVEEAKEL 357
+++ L K R+EEA L
Sbjct: 1003 RIINGLGKSQRMEEALAL 1020
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 110/234 (47%), Gaps = 4/234 (1%)
Query: 129 SFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
S+N L+ + S E +++ + + G++P L +Y+ ++ A K + LL E
Sbjct: 194 SYNGLIHLLIQSGFCGEALEVYRRMVSE-GLKPSLKTYSALMVALGKKRDSEMVMVLLKE 252
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
ME G+R ++ TF + G+ +A +I+ M + P++ +Y +D L Q
Sbjct: 253 MEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQ 312
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKL 305
+ A EL +M++ PD + L+ F + G+L+ K ++++ G + F +
Sbjct: 313 LENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTI 372
Query: 306 LVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
LV +C+ D D AF + L + ++ L + R+E+A +L++
Sbjct: 373 LVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLD 426
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/295 (19%), Positives = 115/295 (38%), Gaps = 39/295 (13%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+ + KA F+ A FD M + + ++N L+ + + + ++ L D +
Sbjct: 373 LVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLL-DTMESV 431
Query: 158 GIEPDLVSYNTIIKAF-----------------------------------VDKGSLDSA 182
G++P +Y T I F + G L A
Sbjct: 432 GVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREA 491
Query: 183 NTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDG 242
T+ + + G+ D +T+N ++ + G+ +A + M+ P+V N+ +D
Sbjct: 492 KTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDS 551
Query: 243 LAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMN 299
L + +A ++ M+ +++P V T+ L+ G EG +++A + C N
Sbjct: 552 LYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPN 611
Query: 300 KAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA 354
F L+ C+ +++ A + + C D V+ L KE +V A
Sbjct: 612 TISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHA 666
>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 694
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 114/240 (47%), Gaps = 10/240 (4%)
Query: 89 ISKEGFTARLIAL------YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKK 142
++KEG ++ Y NA+++F M +V S+N ++ K
Sbjct: 368 MTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKS 427
Query: 143 FDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFN 202
DE L +++ HK + P+ V+YN++I G + SA L+ E+ +G D+IT+
Sbjct: 428 VDEAMNLLREMLHK-NVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYT 486
Query: 203 TLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
+LL G N A ++ M ++PN +Y A +DGL + K A +L + K
Sbjct: 487 SLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVK 546
Query: 263 EINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFA 319
DV+T+ +I G EG L+EA +K +GC + F++++ + EK + D A
Sbjct: 547 GCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKA 606
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 126/260 (48%), Gaps = 6/260 (2%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEPD 162
K + A + EM R V++++ L+ G C+ + L ++ K I PD
Sbjct: 284 KDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFS-LLNEMTLK-NINPD 341
Query: 163 LVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWE 222
+ +Y +I A +G L A LL M K+G++ +++T++TL+ G+ G +A++I+
Sbjct: 342 VYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFH 401
Query: 223 TMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEG 282
MV V P+V SYN ++GL K +A+ L+ EM K + P+ T+ +LI G G
Sbjct: 402 AMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSG 461
Query: 283 NLEEA---KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQ 339
+ A + + G + + L+ +C+ +LD A L + ++
Sbjct: 462 RITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYT 521
Query: 340 LVVDRLAKELRVEEAKELVE 359
++D L K R++ A++L +
Sbjct: 522 ALIDGLCKGARLKNAQKLFQ 541
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 100/207 (48%), Gaps = 13/207 (6%)
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
PD+V YNTII ++ A EM +GI D+IT++TL+ GF G+ A +
Sbjct: 270 PDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSL 329
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
M N+ P+V +Y +D L E + K+A L+G M + + P+V T+ L+ G+
Sbjct: 330 LNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCL 389
Query: 281 EGNLEEAKRWY--------NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCL 332
G + AK+ + N S C N +++ +C+ +D A NL + + +
Sbjct: 390 VGEVHNAKQIFHAMVQTEVNPSVCSYN-----IMINGLCKGKSVDEAMNLLREMLHKNVV 444
Query: 333 VDQAPLQLVVDRLAKELRVEEAKELVE 359
+ ++D L K R+ A +L++
Sbjct: 445 PNTVTYNSLIDGLCKSGRITSALDLMK 471
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 139/288 (48%), Gaps = 13/288 (4%)
Query: 80 LEHQKQYKDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GAC 137
L ++ K+I+ + +T LI K + A+ + M + V++++ L+ G C
Sbjct: 329 LLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYC 388
Query: 138 VNSKKFDEVDGLFKDLPHKL---GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGI 194
+ + + K + H + + P + SYN +I S+D A LL EM K +
Sbjct: 389 LVGEVHNA-----KQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNV 443
Query: 195 RLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALE 254
+ +T+N+L+ G +GR A + + + + +V +Y + LDGL + KA+
Sbjct: 444 VPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIA 503
Query: 255 LVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVC 311
L +M+ + I P+ +T+ ALI G L+ A++ + GC ++ + +++ +C
Sbjct: 504 LFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLC 563
Query: 312 EKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
++G LD A + + C+ D ++++ L ++ ++A++L+
Sbjct: 564 KEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLH 611
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 110/236 (46%), Gaps = 4/236 (1%)
Query: 126 TVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTL 185
+++ F +LG+ V K F L K + K GIEPDLV+ + +I F G + + ++
Sbjct: 131 SIIEFGKILGSLVKMKHFPTAISLSKQMEVK-GIEPDLVTLSILINCFCHLGQMAFSFSV 189
Query: 186 LYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAI 245
L ++ K G + + I TL+ G G + + +V + N SY L+GL
Sbjct: 190 LGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCK 249
Query: 246 EKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNKAI 302
+T+ A++L+ + + PDV + +I G + + EA +Y N G +
Sbjct: 250 IGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVIT 309
Query: 303 FKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
+ L+ C G L AF+L + D +++D L KE +++EAK L+
Sbjct: 310 YSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLL 365
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 11/208 (5%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G + + VSY T++ G A LL +E + R D++ +NT++ G + +A
Sbjct: 232 GFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEA 291
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ M + + P+V +Y+ + G + Q A L+ EM K INPDV+T+ LI
Sbjct: 292 YDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDA 351
Query: 278 FVNEGNLEEAKRW---YNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
EG L+EAK K G N + L+ C G++ A K+ F +
Sbjct: 352 LCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNA----KQIFHAMVQTE 407
Query: 335 QAP----LQLVVDRLAKELRVEEAKELV 358
P ++++ L K V+EA L+
Sbjct: 408 VNPSVCSYNIMINGLCKGKSVDEAMNLL 435
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 4/170 (2%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRF-RWIEEILEHQK 84
S+I G+ K + +D K+ G+ + YT + L + + I ++ ++
Sbjct: 452 SLIDGLCKSGRITSALDLMKELHHRGQ-PADVITYTSLLDGLCKNQNLDKAIALFMKMKE 510
Query: 85 QYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
+ +K +TA LI K A +NA+K+F + + C V ++N ++G D
Sbjct: 511 RGIQPNKYTYTA-LIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLD 569
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGI 194
E + + G PD V++ II++ +K D A LL+EM KG+
Sbjct: 570 EALAMKSKMEDN-GCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 618
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 71/173 (41%), Gaps = 7/173 (4%)
Query: 56 NTGIYTGTVQRLANAKRFRWIEEI---LEHQKQYKDISKEGFTARLIALYGKAAMFENAR 112
NT Y + L + R ++ L H+ Q D+ +T+ L L K + A
Sbjct: 446 NTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVIT--YTSLLDGLC-KNQNLDKAI 502
Query: 113 KVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKA 172
+F +M R + ++ AL+ + LF+ + K G D+ +YN +I
Sbjct: 503 ALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVK-GCCIDVYTYNVMIGG 561
Query: 173 FVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMV 225
+G LD A + +ME G D +TF ++ + AEK+ M+
Sbjct: 562 LCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMI 614
>gi|255660826|gb|ACU25582.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
Length = 418
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 137/283 (48%), Gaps = 10/283 (3%)
Query: 86 YKDISKEGFTARL------IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
Y++I + G+ A L + + K A+ VFD + +V+S+N L+ +
Sbjct: 124 YEEILECGYPASLYFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIR 183
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
+E L K H G++PD+ +Y+ +I + +D AN L EM KG+ + +
Sbjct: 184 LGDLNEGFKL-KSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFEEMLVKGLVPNGV 242
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
TF TL+ G NGR A ++++ M++ ++ P++ +YN + GL + +A +L+ EM
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEVYKQMLSQSLLPDLITYNTLIYGLCKKGALNQAHDLMDEM 302
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLE---EAKRWYNKSGCGMNKAIFKLLVPFVCEKGDL 316
K + PD T+ LI G EG+L+ E ++ + ++ + L+ +C++G
Sbjct: 303 SMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRS 362
Query: 317 DFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
A + + S D ++++ K+ V + +L++
Sbjct: 363 VDAEKMMREMLSFGLKPDTGTYTMIINEFCKKGDVWKGSKLLK 405
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 84/173 (48%), Gaps = 1/173 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K + A +V+ +M ++ ++++N L+ ++ L ++ K
Sbjct: 247 LIDGHCKNGRVDLAMEVYKQMLSQSLLPDLITYNTLIYGLCKKGALNQAHDLMDEMSMK- 305
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD ++Y T+I +G LD+A M ++ IRLD + + L+ G GR DA
Sbjct: 306 GLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDA 365
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
EK+ M++ ++P+ +Y ++ + K +L+ EM+ P V T
Sbjct: 366 EKMMREMLSFGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPSVVT 418
>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 118/240 (49%), Gaps = 4/240 (1%)
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL 179
G C V++++ ++ N + + LF ++ + G++PD+V+YN II A ++
Sbjct: 258 GGACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQ-GVKPDVVTYNLIIDALCKARAM 316
Query: 180 DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNAR 239
D A +L +M G + D +T++ ++ G+ + GR +A K++ M + PN+ + N+
Sbjct: 317 DKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSF 376
Query: 240 LDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGC 296
L L ++K+A E M +K PD+F++ L+ G+ +EG + +N +G
Sbjct: 377 LASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGI 436
Query: 297 GMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKE 356
N +F +L+ ++G +D A + + D V+ ++ R+ +A E
Sbjct: 437 AANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAME 496
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 127/281 (45%), Gaps = 11/281 (3%)
Query: 52 RFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLI------ALYGKA 105
R T G TV + + + E K ++++ K G ++ A K
Sbjct: 324 RQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKH 383
Query: 106 AMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVS 165
+ A + FD M + + + S+ LL + F ++ GLF + GI +
Sbjct: 384 GRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSN-GIAANCHV 442
Query: 166 YNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMV 225
+ +I A+ +G +D A + EM+++G+ D++T++T++ F GR DA + + MV
Sbjct: 443 FTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMV 502
Query: 226 NMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI-NPDVFTFYALIKGFVNEGNL 284
++PN Y++ + G + KA ELV EM +K I PD+ F ++I +G +
Sbjct: 503 ARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRV 562
Query: 285 EEAKRWYN-KSGCGMNKAI--FKLLVPFVCEKGDLDFAFNL 322
+A ++ + G + F L+ C G +D AF +
Sbjct: 563 MDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKI 603
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 169/386 (43%), Gaps = 69/386 (17%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQR------LANAKRFRWIEEI 79
+VI + L ++KF + G + NT +Y+ +Q L AK + E+
Sbjct: 480 TVISTFSRMGRLTDAMEKFNQMVARG-IQPNTAVYSSIIQGFCMHGGLVKAKEL--VSEM 536
Query: 80 LEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFD------EMPGRNCEQTVLSFNAL 133
+ DI F + +I K +A +FD E PG V++FN+L
Sbjct: 537 INKGIPRPDIV---FFSSVINSLCKDGRVMDAHDIFDLATDIGERPG------VITFNSL 587
Query: 134 L-GACVNSKKFDEVDGLFK--DLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEME 190
+ G C+ K +D FK D +G+EPD+V+YNT++ + G ++ TL EM+
Sbjct: 588 IDGYCLVGK----MDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQ 643
Query: 191 KKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMV------------------------- 225
+KG++ + +T+ +L G + GR A K + M+
Sbjct: 644 RKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCAD 703
Query: 226 ----------NMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
MNV+ ++ N ++ + ++ ++A EL + + + P+ T+ +I
Sbjct: 704 EAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMI 763
Query: 276 KGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCL 332
+ +G +E+A ++ KSG + ++ + EKG++ A N + +R L
Sbjct: 764 INLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRIL 823
Query: 333 VDQAPLQLVVDRLAKELRVEEAKELV 358
++ + L++ +++ + +E +L+
Sbjct: 824 LEASTTSLMLSLFSRKGKYQEDIKLL 849
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 82/166 (49%), Gaps = 2/166 (1%)
Query: 128 LSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLY 187
++ N LL + + +E + +LG P+ VSY+ ++KA D A LL
Sbjct: 193 ITANTLLKCLCYANRTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQ 252
Query: 188 EMEKKG--IRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAI 245
M K+G D++ ++T++ GF++ G A ++ M V+P+V +YN +D L
Sbjct: 253 MMAKQGGACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCK 312
Query: 246 EKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY 291
+ KA ++ +M + PD T+ +I G+ G L+EA + +
Sbjct: 313 ARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMF 358
>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
Length = 855
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 100/196 (51%), Gaps = 4/196 (2%)
Query: 127 VLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLL 186
V+++ AL+ + K D L D G EP+ + Y+ +I F G +DSA +
Sbjct: 444 VVTYGALVDGLCKAHKVDHAHELL-DAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF 502
Query: 187 YEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIE 246
+M K G + T+ +L+ + +GR A K+ M+ + PNV +Y A +DGL
Sbjct: 503 LQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRI 562
Query: 247 KQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNKAIF 303
+++KAL+L+ M K +P+V T+ ALI G G ++ + + ++ GC N +
Sbjct: 563 GESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTY 622
Query: 304 KLLVPFVCEKGDLDFA 319
++L+ +C G LD A
Sbjct: 623 RVLINHLCAAGLLDKA 638
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/389 (20%), Positives = 165/389 (42%), Gaps = 61/389 (15%)
Query: 41 VDKFKKSSDLGR------FRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGF 94
V KF K+ L + F +T Y+ + L +A + + + K ++ + +
Sbjct: 266 VGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMV-GVTPDVY 324
Query: 95 T-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE-------- 145
T LI + KA + E A+ +F+EM C TV+++ AL+ A + +K+ +
Sbjct: 325 TYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRM 384
Query: 146 ---------------VDGLFK--------DLPHKL-------------------GIEPDL 163
VDGL K ++ KL + P++
Sbjct: 385 VDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNV 444
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
V+Y ++ +D A+ LL M G + I ++ L+ GF G+ A++++
Sbjct: 445 VTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQ 504
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M P+V +Y + +D + + + A++++ +M P+V T+ A+I G G
Sbjct: 505 MTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGE 564
Query: 284 LEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL 340
E+A + + + GC N + L+ + + G +D + +L + + C + ++
Sbjct: 565 SEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRV 624
Query: 341 VVDRLAKELRVEEAKELVELGKTNSYCRY 369
+++ L +++A+ L+ K + +Y
Sbjct: 625 LINHLCAAGLLDKARLLLGEMKQTYWPKY 653
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 108/270 (40%), Gaps = 20/270 (7%)
Query: 107 MFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSY 166
+ + A K++ EM NC ++ KFD+ L K++ K G PD +Y
Sbjct: 233 LLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRK-GFVPDTSTY 291
Query: 167 NTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVN 226
+ +I ++ A L EM+ G+ D+ T+ L+ F G A+ ++E M +
Sbjct: 292 SKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRS 351
Query: 227 MNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEE 286
+ P V +Y A + KQ +A ++ M P+ T+ AL+ G GN+ +
Sbjct: 352 VGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISK 411
Query: 287 AKRWY-------------------NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTF 327
A Y ++ N + LV +C+ +D A L
Sbjct: 412 AFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAML 471
Query: 328 SERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
S C + ++D K +++ A+E+
Sbjct: 472 SSGCEPNHIVYDALIDGFCKAGKIDSAQEV 501
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 73/177 (41%), Gaps = 6/177 (3%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G P V+YN +++ G +D + EM + G +D T GR+ADA
Sbjct: 35 GYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADA 94
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ E + + + + GL +A+ + MR P+V T+ L+ G
Sbjct: 95 LDMIE---REDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSG 151
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERC 331
F+ + L KR N GC N ++F LV C + D +A+ L R + C
Sbjct: 152 FLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGC 208
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 118/301 (39%), Gaps = 45/301 (14%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQ-K 84
++I G K + + F + + G + + YT + R+ R ++L K
Sbjct: 484 ALIDGFCKAGKIDSAQEVFLQMTKCG-YLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLK 542
Query: 85 QYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
+ +TA + L + E A K+ M + C V+++ AL+ + K D
Sbjct: 543 DSCTPNVVTYTAMIDGL-CRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKID 601
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKK------------ 192
LF + K G P+ V+Y +I G LD A LL EM++
Sbjct: 602 LSLDLFTQMSRK-GCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCA 660
Query: 193 ------------GIRLDLITFNTLLLG---------FYSNGRFADAEKIWETMVNM--NV 229
GI ++ ++ T+ + F GR A ++ + M+ + +V
Sbjct: 661 IQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSV 720
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
+ + Y + + L + Q ++A L EM + P++ F LIKG V E K+
Sbjct: 721 KTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLV------EVKK 774
Query: 290 W 290
W
Sbjct: 775 W 775
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 86/227 (37%), Gaps = 13/227 (5%)
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
D V +I ++ D A + L+ M +++T+ TLL GF + ++I
Sbjct: 106 DTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRII 165
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
M+ PN +N+ + EK A +L+ M + P + I +
Sbjct: 166 NMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQ 225
Query: 282 GNLEE------AKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCL 332
L A++ Y + + C +NK +C G D AF L K + +
Sbjct: 226 EKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFV 285
Query: 333 VDQAPLQLVVDRLAKELRVEEA----KELVELGKTNSYCRYNLKFPS 375
D + V+ L +VE+A +E+ +G T Y + S
Sbjct: 286 PDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDS 332
>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 774
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 152/334 (45%), Gaps = 9/334 (2%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEIL-EHQK 84
++I G+ K+ + VD S G N YT + + +L E
Sbjct: 385 TLIHGLCKKGLMGSAVDMVNDMSANG-CTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSA 443
Query: 85 QYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKF 143
+ +++ G+ L AL K A + EM + C+ + +FN L+ G C +K
Sbjct: 444 KGFELNIMGYNVLLRAL-CKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKE 502
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT 203
D + L++D+ G+ + V+YNT+I AF+ G++ A L+ +M +G LD IT+N
Sbjct: 503 DAL-ALYRDMLLD-GVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNG 560
Query: 204 LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
L+ F G A +++ MV ++ P+ S N ++GL + ALEL+ +M +
Sbjct: 561 LIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRG 620
Query: 264 INPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAF 320
+ PDV T+ +LI G GN+ EA +NK G + + L+ + C G D A+
Sbjct: 621 LAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDAY 680
Query: 321 NLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA 354
L R + + ++V KE+ E
Sbjct: 681 LLLLRGVENAFIPNDVTWYILVSNFIKEIGKENG 714
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 107/254 (42%), Gaps = 7/254 (2%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
+ A+ + +++P N + F L+ V S + DE + D K G PD+ ++NT
Sbjct: 330 DEAQVLLNKVPTPN----DVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNT 385
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
+I KG + SA ++ +M G +LIT+ TLL GF + +A + M
Sbjct: 386 LIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKG 445
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
N+ YN L L + KAL+++GEM K PD+FTF LI G E+A
Sbjct: 446 FELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDAL 505
Query: 289 RWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRL 345
Y G N + L+ G + A L C +D+ ++
Sbjct: 506 ALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAF 565
Query: 346 AKELRVEEAKELVE 359
K E+A L +
Sbjct: 566 CKLGATEKALGLFD 579
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 145/332 (43%), Gaps = 37/332 (11%)
Query: 59 IYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEM 118
+Y + +L AK F+ I+++L K+ +E ++ YG+A + A ++ +M
Sbjct: 104 VYHVLIDKLGAAKEFKVIDKLLLQIKEEGIAFRESLFICIMKYYGRANLPGQATRMLLDM 163
Query: 119 PG-RNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKG 177
G CE T S+N +L V++ +F ++ K G+ P + ++ ++KA
Sbjct: 164 KGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSK-GVIPTVYTFGVVMKALCMVN 222
Query: 178 SLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYN 237
+D+A +LL +M K G + + + TL+ R +A K+ E M M P+V ++N
Sbjct: 223 EVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFN 282
Query: 238 ARLDGLAIEKQTKKALELVGEMRSKEINPDVFT--------------------------- 270
+ GL + + +LV M + P+ T
Sbjct: 283 DVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPTP 342
Query: 271 ----FYALIKGFVNEGNLEEAKRW-YN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
F LI G+V G L+EA + Y+ K+GC + F L+ +C+KG + A ++
Sbjct: 343 NDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDM 402
Query: 323 CKRTFSERCLVDQAPLQLVVDRLAKELRVEEA 354
+ C + ++D K+ ++EEA
Sbjct: 403 VNDMSANGCTPNLITYTTLLDGFCKKNQLEEA 434
>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 114/215 (53%), Gaps = 4/215 (1%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
E A +F EM + V+++N+L+ N ++ + L ++ K I P++V++N
Sbjct: 275 EVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEK-KINPNVVTFNA 333
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
+I AF +G L A L EM ++ I D IT+N L+ GF + R +A+++++ MV+ +
Sbjct: 334 LIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKD 393
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
PN+++YN ++G K+ + +EL EM + + + T+ +I+GF G+ + A+
Sbjct: 394 CLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQ 453
Query: 289 RWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAF 320
+ + + + + +L+ +C G LD A
Sbjct: 454 MVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTAL 488
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 112/249 (44%), Gaps = 33/249 (13%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
++A +F +M +++ FN LL A KF+ V L + + LGI DL +Y+
Sbjct: 65 DDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQM-QTLGISHDLYTYSI 123
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
I F + L A +L +M K G D++T ++LL G+ + R +DA + + MV M
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
+P+ ++ + GL + + +A+ LV +M + PD+ T+ ++ G
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG----------- 232
Query: 289 RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKE 348
+C++GD+D A NL + + R + ++D L K
Sbjct: 233 ---------------------LCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKY 271
Query: 349 LRVEEAKEL 357
VE A +L
Sbjct: 272 RHVEVAVDL 280
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 100/191 (52%), Gaps = 4/191 (2%)
Query: 101 LYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIE 160
L+ KA+ A + D+M R C+ ++++ ++ D L + I+
Sbjct: 200 LHNKAS---EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKM-EAARIK 255
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
++V +NTII + ++ A L EME KGIR +++T+N+L+ + GR++DA ++
Sbjct: 256 ANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRL 315
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
M+ + PNV ++NA +D E + +A +L EM + I+PD T+ LI GF
Sbjct: 316 LSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCM 375
Query: 281 EGNLEEAKRWY 291
L+EAK+ +
Sbjct: 376 HNRLDEAKQMF 386
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 136/292 (46%), Gaps = 10/292 (3%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRF----RWIEEILE 81
++I + K +++ VD F + G R N Y + L N R+ R + +LE
Sbjct: 263 TIIDSLCKYRHVEVAVDLFTEMETKG-IRPNVVTYNSLINCLCNYGRWSDASRLLSNMLE 321
Query: 82 HQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSK 141
+ ++ F A + A + + + E A K+ +EM R+ + +++N L+
Sbjct: 322 KKINPNVVT---FNALIDAFFKEGKLVE-AEKLHEEMIQRSIDPDTITYNLLINGFCMHN 377
Query: 142 KFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITF 201
+ DE +FK + K + P++ +YNT+I F ++ L EM ++G+ + +T+
Sbjct: 378 RLDEAKQMFKFMVSKDCL-PNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTY 436
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS 261
T++ GF+ G A+ +++ MV+ V ++ +Y+ L GL + AL + ++
Sbjct: 437 TTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQK 496
Query: 262 KEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKAIFKLLVPFVCEK 313
E+ ++F + +I+G G + EA + + + ++ +C K
Sbjct: 497 SEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSK 548
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 134/317 (42%), Gaps = 40/317 (12%)
Query: 80 LEHQKQYKDISKEGFTARL-IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACV 138
L Q Q IS + +T + I + + + A V +M E +++ ++LL
Sbjct: 105 LGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYC 164
Query: 139 NSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL 198
+SK+ + L + ++G +PD ++ T+I A L+ +M ++G + DL
Sbjct: 165 HSKRISDAVALVDQMV-EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDL 223
Query: 199 ITFNTLLLGFYSNGRF---------ADAEKIWETMVNMN--------------------- 228
+T+ T++ G G +A +I +V N
Sbjct: 224 VTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTE 283
Query: 229 -----VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
+RPNV +YN+ ++ L + A L+ M K+INP+V TF ALI F EG
Sbjct: 284 METKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGK 343
Query: 284 LEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL 340
L EA++ + + + + LL+ C LD A + K S+ CL +
Sbjct: 344 LVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNT 403
Query: 341 VVDRLAKELRVEEAKEL 357
+++ K RVE+ EL
Sbjct: 404 LINGFCKCKRVEDGVEL 420
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 99/232 (42%), Gaps = 5/232 (2%)
Query: 56 NTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVF 115
N Y + KR E+ Q + +I + +A ++A+ VF
Sbjct: 397 NIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVF 456
Query: 116 DEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVD 175
+M +++++ LL + K D +FK L K +E ++ YNT+I+
Sbjct: 457 KQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYL-QKSEMELNIFIYNTMIEGMCK 515
Query: 176 KGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRS 235
G + A L + I+ D++T+NT++ G S +A+ ++ M PN +
Sbjct: 516 AGKVGEAWDLFCSLS---IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGT 572
Query: 236 YNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
YN + + + EL+ EMRS D T +L+ +++G L+++
Sbjct: 573 YNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTI-SLVTNMLHDGRLDKS 623
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 83/201 (41%), Gaps = 12/201 (5%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I G K ++ V+ F++ S G NT YT +Q A + + +
Sbjct: 403 TLINGFCKCKRVEDGVELFREMSQRG-LVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVS 461
Query: 86 YK---DISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKK 142
+ DI + YGK + A +F + E + +N ++ + K
Sbjct: 462 NRVPTDIMTYSILLHGLCSYGK---LDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGK 518
Query: 143 FDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFN 202
E LF L I+PD+V+YNT+I K L A+ L +M++ G + T+N
Sbjct: 519 VGEAWDLF----CSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYN 574
Query: 203 TLL-LGFYSNGRFADAEKIWE 222
TL+ R A AE I E
Sbjct: 575 TLIRANLRDCDRAASAELIKE 595
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 147/318 (46%), Gaps = 16/318 (5%)
Query: 64 VQRLANAKRFR----WIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMP 119
++ L A + R +EE+ H + +I+ FT L+ + + A K+ +M
Sbjct: 165 IKALCKAHQLRPAILMLEEMANHGLKPDEIT---FTT-LMQGFIEEGDLNGALKMKKQML 220
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL 179
G C T +S L+ + +E ++ + G PD V++N+++ F G++
Sbjct: 221 GYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEE-GFSPDQVTFNSLVNGFCRIGNV 279
Query: 180 DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNAR 239
+ A ++ M +KG D+ T+N+L+ G G F A +I + M+ PN +YN
Sbjct: 280 NDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTL 339
Query: 240 LDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGC 296
+ L E + + A +L + SK + PDV TF LI+G N + A + + GC
Sbjct: 340 ISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGC 399
Query: 297 GMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKE 356
++ + +L+ +C + L A L K S C + ++D L K R+E+A+E
Sbjct: 400 KPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEE 459
Query: 357 LVE----LGKTNSYCRYN 370
+ + LG + S YN
Sbjct: 460 IFDQMELLGVSRSSVTYN 477
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 141/303 (46%), Gaps = 7/303 (2%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
S++ G + N+ +D + G F + Y + + F EIL+ Q
Sbjct: 268 SLVNGFCRIGNVNDALDIVDFMIEKG-FDPDVYTYNSLISGMCKLGEFEKAIEILQ-QMI 325
Query: 86 YKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
++ S T LI+ K E A + + + V +FN L+ SK D
Sbjct: 326 LRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQD 385
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
+F+++ +K G +PD +Y+ +I + + L A LL EME G + + +NTL
Sbjct: 386 IAMEMFEEMKNK-GCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTL 444
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+ G + R DAE+I++ M + V + +YN +DGL K+ ++A +L+ +M + +
Sbjct: 445 IDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGL 504
Query: 265 NPDVFTFYALIKGFVNEGNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFN 321
PD FT+ +L+ F G++E+A + +GC + + L+ +C G +D A
Sbjct: 505 KPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASK 564
Query: 322 LCK 324
L +
Sbjct: 565 LLR 567
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 120/264 (45%), Gaps = 4/264 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI+ K FE A ++ +M R C +++N L+ A + + L + L K
Sbjct: 304 LISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSK- 362
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ PD+ ++NT+I+ + D A + EM+ KG + D T++ L+ R +A
Sbjct: 363 GLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEA 422
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ + M + N YN +DGL ++ + A E+ +M ++ T+ LI G
Sbjct: 423 LMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDG 482
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
+EEA + ++ G +K + L+ + C GD++ A ++ + S C D
Sbjct: 483 LCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPD 542
Query: 335 QAPLQLVVDRLAKELRVEEAKELV 358
++ L + RV+ A +L+
Sbjct: 543 IFTYGTLIGGLCRAGRVDVASKLL 566
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 91/185 (49%), Gaps = 2/185 (1%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K+ E+A ++FD+M ++ +++N L+ +K+ +E L + + G++PD
Sbjct: 450 KSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIME-GLKPDK 508
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
+YN+++ F G ++ A ++ M G D+ T+ TL+ G GR A K+ +
Sbjct: 509 FTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRS 568
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
+ + +YN + L + K+TK+ + L EM K PD T + +G N G
Sbjct: 569 VQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGG 628
Query: 284 -LEEA 287
++EA
Sbjct: 629 PIQEA 633
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 126/309 (40%), Gaps = 45/309 (14%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
+++ F++ + ++ +F L+ + N F E++ L K L ++LG +PD
Sbjct: 67 QSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTN---FHEIENLLKILENELGFKPDT 123
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
YN + A V+ L L +M +GI LD+ TFN L+ + A + E
Sbjct: 124 NFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEE 183
Query: 224 MVNMNVRPNVRSYNARLDG----------LAIEKQ------------------------- 248
M N ++P+ ++ + G L ++KQ
Sbjct: 184 MANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGR 243
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKL 305
++AL V E+ + +PD TF +L+ GF GN+ +A + + G + +
Sbjct: 244 VEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNS 303
Query: 306 LVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVEL----G 361
L+ +C+ G+ + A + ++ C + ++ L KE +E A +L + G
Sbjct: 304 LISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKG 363
Query: 362 KTNSYCRYN 370
C +N
Sbjct: 364 LLPDVCTFN 372
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 86/194 (44%), Gaps = 5/194 (2%)
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
T++ S DS TLL +++ G + TF TL+ F + + KI E +
Sbjct: 60 TLLLQLTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLKILEN--EL 117
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+P+ YN L+ L + + K L +M ++ I DV TF LIK L A
Sbjct: 118 GFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPA 177
Query: 288 KRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDR 344
+ G ++ F L+ E+GDL+ A + K+ CL+ ++++V+
Sbjct: 178 ILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNG 237
Query: 345 LAKELRVEEAKELV 358
KE RVEEA V
Sbjct: 238 FCKEGRVEEALRFV 251
>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 123/271 (45%), Gaps = 5/271 (1%)
Query: 56 NTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVF 115
+T Y + A R + ++ K I +A K + A ++F
Sbjct: 334 DTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIF 393
Query: 116 DEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVD 175
D M + + ++S+ LL + F ++ GLF + GI D +N +I A+
Sbjct: 394 DSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSN-GIAADCRVFNILIHAYAK 452
Query: 176 KGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRS 235
+G +D A + EM+++G+ D++T++T++ F GR DA + + MV ++PN
Sbjct: 453 RGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAV 512
Query: 236 YNARLDGLAIEKQTKKALELVGEMRSKEI-NPDVFTFYALIKGFVNEGNLEEAKRWYN-- 292
Y++ + G + KA ELV EM +K I PD+ F ++I +G + +A ++
Sbjct: 513 YHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLV 572
Query: 293 -KSGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
G + F L+ C G +D AF +
Sbjct: 573 TDIGERPDVITFTSLIDGYCLVGKMDKAFKI 603
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 124/256 (48%), Gaps = 6/256 (2%)
Query: 106 AMFENARKVFDEMP--GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
+M + A +F M G C V+++N ++ + + LF ++ + G++PD+
Sbjct: 242 SMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQ-GVKPDV 300
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
V+YN II A ++D A +L +M G + D +T+N ++ G+ + GR +A K++
Sbjct: 301 VTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRK 360
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M + + PN+ N+ L L ++K+A E+ M +K PD+ ++ L+ G+ +EG
Sbjct: 361 MKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGW 420
Query: 284 LEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL 340
+ +N +G + +F +L+ ++G +D A + + D
Sbjct: 421 FADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYST 480
Query: 341 VVDRLAKELRVEEAKE 356
V+ ++ R+ +A E
Sbjct: 481 VISAFSRMGRLTDAME 496
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 79/380 (20%), Positives = 162/380 (42%), Gaps = 57/380 (15%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQR------LANAKRFRWIEEI 79
+VI + L ++KF + G + NT +Y +Q L AK + E+
Sbjct: 480 TVISAFSRMGRLTDAMEKFNQMVARG-IQPNTAVYHSIIQGFCMHGGLVKAKEL--VSEM 536
Query: 80 LEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACV 138
+ DI F +I K +A +FD + V++F +L+ G C+
Sbjct: 537 INKGIPRPDIV---FFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCL 593
Query: 139 NSKKFDEVDGLFK--DLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRL 196
K +D FK D +G+E D+V+Y+T++ + G ++ TL EM++KG++
Sbjct: 594 VGK----MDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKP 649
Query: 197 DLITFNTLLLGFYSNGRFADAEKIWETMV------------------------------- 225
+ +T+ +L G + GR A K + M+
Sbjct: 650 NTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILF 709
Query: 226 ----NMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
MNV+ ++ N ++ + ++ ++A EL + + + P+ T+ +I + +
Sbjct: 710 QKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKD 769
Query: 282 GNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPL 338
G +E+A ++ KSG + ++ + EKG++ A N + +R L++ +
Sbjct: 770 GAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTT 829
Query: 339 QLVVDRLAKELRVEEAKELV 358
L++ +++ + E +L+
Sbjct: 830 SLMLSLFSRKGKYHEDMKLL 849
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 70/140 (50%), Gaps = 2/140 (1%)
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKG--IRLDLITFNTLLLGFYSNGR 213
+LG P++ SY+ I+K D A L M K+G +++ +NT++ GF+ G
Sbjct: 221 ELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGE 280
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
A ++ M V+P+V +YN +D L + KA ++ +M + PD T+
Sbjct: 281 TGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNC 340
Query: 274 LIKGFVNEGNLEEAKRWYNK 293
+I G+ G L+EA + + K
Sbjct: 341 MIHGYATLGRLKEAAKMFRK 360
>gi|410109869|gb|AFV61014.1| pentatricopeptide repeat-containing protein 11, partial
[Acantholippia seriphioides]
Length = 414
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 149/334 (44%), Gaps = 30/334 (8%)
Query: 66 RLANAKRFRWI-----EEILEHQKQ----------YKDISKEGFTARL------IALYGK 104
RL +F W+ ++LEH + Y++I + G+ A L + + K
Sbjct: 79 RLTREHKF-WVPFDTCRKVLEHLMKLKYFKLVWGFYQEILECGYPASLYFFNILMHRFCK 137
Query: 105 AAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLV 164
A+ VFD + +V+S+N L+ + DE L K H G++PD+
Sbjct: 138 EGNIRVAQSVFDAITKWGLRPSVVSYNTLMSGYIRLGDLDEGFRL-KSAMHASGVQPDVY 196
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
+Y+ +I + +D AN L EM G+ +TF TL+ G NGR A +I++ M
Sbjct: 197 TYSVLINGLCKEXKMDEANELFDEMLVXGLVPXGVTFTTLIDGHCKNGRVDLAMEIYKQM 256
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
++ ++ P++ +YN + GL + K+A L+ EM K PD T+ LI G EG+L
Sbjct: 257 LSQSLLPDLITYNTLIYGLCKKGBLKQAHVLIXEMSLKGXKPDKITYTTLIDGCCKEGDL 316
Query: 285 E---EAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLV 341
+ E ++ + ++ + L+ +C++G A + + S D ++
Sbjct: 317 DTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGXKPDTRTYTMI 376
Query: 342 VDRLAKELRVEEA----KELVELGKTNSYCRYNL 371
++ K+ V KE+ G S YN+
Sbjct: 377 INEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNV 410
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 86/180 (47%), Gaps = 1/180 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K + A +++ +M ++ ++++N L+ + L ++ K
Sbjct: 236 LIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGBLKQAHVLIXEMSLK- 294
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G +PD ++Y T+I +G LD+A M ++ IRLD + + L+ G GR DA
Sbjct: 295 GXKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDA 354
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
EK+ M+++ +P+ R+Y ++ + +L+ EM+ P V T+ L+ G
Sbjct: 355 EKMLREMLSVGXKPDTRTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMNG 414
>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 545
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 130/264 (49%), Gaps = 4/264 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K A+ V M +N + V+++N+L+ K+ ++ LF + +
Sbjct: 274 LIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQR- 332
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ PD+ SY+ +I F +D A L EM K I +++T+N+L+ G +GR + A
Sbjct: 333 GVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCA 392
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ + M + N+ +YN+ LD + KA+ L+ +++ K I PD+FT+ LI G
Sbjct: 393 LELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLING 452
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
G L++A++ + G N + L+ C KG D + + C+ +
Sbjct: 453 LCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPN 512
Query: 335 QAPLQLVVDRLAKELRVEEAKELV 358
++++ L ++ ++A++L+
Sbjct: 513 AITYEILIHSLFEKDENDKAEKLL 536
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 117/251 (46%), Gaps = 4/251 (1%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A ++ + G+ V+ ++ ++ + K ++ L+ ++ K I PD+V+Y+++I
Sbjct: 182 AVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSK-RISPDVVTYSSLI 240
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
F G L A L M I ++ TF+ L+ GF G+ +A+ + M+ NV+
Sbjct: 241 SGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVK 300
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
+V +YN+ +DG + KQ KA L M + + PDV+++ +I GF ++EA +
Sbjct: 301 LDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKL 360
Query: 291 YNKSGCGM---NKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAK 347
+ + C N + LV +C+ G A L + ++D + K
Sbjct: 361 FEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICK 420
Query: 348 ELRVEEAKELV 358
V++A L+
Sbjct: 421 NNHVDKAIVLL 431
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 102/211 (48%), Gaps = 4/211 (1%)
Query: 80 LEHQKQYKDISKEGFTARLIA-LYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GAC 137
L Q ++ I + T L+ + + + + VF ++ + ++F L+ G C
Sbjct: 80 LSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLC 139
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLD 197
+ + + F D G + D VSY T+I G +A LL ++ K +R +
Sbjct: 140 LKGEVHKAL--YFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPN 197
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
++ ++T++ + DA ++ MV+ + P+V +Y++ + G + + K A++L
Sbjct: 198 VVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFN 257
Query: 258 EMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
M S INP+V+TF LI GF EG + EAK
Sbjct: 258 RMISDNINPNVYTFSILIDGFCKEGKVREAK 288
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 74/152 (48%), Gaps = 1/152 (0%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A ++ DEM R ++++N++L A + D+ L + K GI+PD+ +Y +I
Sbjct: 392 ALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEK-GIQPDIFTYTVLI 450
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
G LD A + ++ KG ++ T+ +L+ GF + G F + + M +
Sbjct: 451 NGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCI 510
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
PN +Y + L + + KA +L+ EM ++
Sbjct: 511 PNAITYEILIHSLFEKDENDKAEKLLREMIAR 542
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 96/254 (37%), Gaps = 46/254 (18%)
Query: 149 LFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF 208
LF L HK P + + I+ + + +A +L +ME GI+ D IT N L+ F
Sbjct: 44 LFNRLLHKNNPIPPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCF 103
Query: 209 YSNGRFADAEKIWETMVNMNVRPNV----------------------------------- 233
G + ++ ++ P+
Sbjct: 104 SQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQ 163
Query: 234 RSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK 293
SY ++GL +TK A++L+ + K + P+V + +I + + +A Y
Sbjct: 164 VSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLY-- 221
Query: 294 SGCGM-------NKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLA 346
C M + + L+ C G L +A +L R S+ + +++D
Sbjct: 222 --CEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFC 279
Query: 347 KELRVEEAKELVEL 360
KE +V EAK ++ +
Sbjct: 280 KEGKVREAKNVLAV 293
>gi|297835856|ref|XP_002885810.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331650|gb|EFH62069.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 536
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 128/298 (42%), Gaps = 41/298 (13%)
Query: 103 GKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPD 162
GKA E A ++ M G C ++++N L+ S + + + +F D+ G PD
Sbjct: 220 GKA---EKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMFDDVKSSSGCSPD 276
Query: 163 LVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI-- 220
+V+Y ++I + G + A+ LL +M + GI +TFN L+ G+ G AE+I
Sbjct: 277 VVTYTSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMHTAEEIRG 336
Query: 221 ---------------------------------WETMVNMNVRPNVRSYNARLDGLAIEK 247
WE M + PN +Y+ ++ L E
Sbjct: 337 KMISFGCFPDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFPNAFTYSILINALCKEN 396
Query: 248 QTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA---KRWYNKSGCGMNKAIFK 304
+ KA EL+G++ SK+I P F + +I GF G + EA K C +K F
Sbjct: 397 RLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEAIVIVEEMEKKKCKPDKITFT 456
Query: 305 LLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGK 362
+L+ C KG + A ++ + + C D+ + ++ L K +EA L ++
Sbjct: 457 ILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIAH 514
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 125/256 (48%), Gaps = 7/256 (2%)
Query: 109 ENARKVFDE-MPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
E+A K+F+E + ++C T +FN L+ K ++ L + G PD+V+YN
Sbjct: 188 EDAMKLFEEHLRFQSCNDTK-TFNILIRGLCGVGKAEKAVELLGGMS-GFGCLPDIVTYN 245
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKK-GIRLDLITFNTLLLGFYSNGRFADAEKIWETMVN 226
T+IK F L AN + +++ G D++T+ +++ G+ G+ +A + + M+
Sbjct: 246 TLIKGFCKSNELKKANEMFDDVKSSSGCSPDVVTYTSMISGYCKAGKMQEASVLLDDMLR 305
Query: 227 MNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEE 286
+ + P ++N +DG A + A E+ G+M S PDV TF +LI G+ G + +
Sbjct: 306 LGIYPTNVTFNVLVDGYAKAGEMHTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVNQ 365
Query: 287 AKR-WYNKSGCGM--NKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVD 343
R W + GM N + +L+ +C++ L A L + S+ + V+D
Sbjct: 366 GFRLWEEMNARGMFPNAFTYSILINALCKENRLLKARELLGQLASKDIIPQPFMYNPVID 425
Query: 344 RLAKELRVEEAKELVE 359
K +V EA +VE
Sbjct: 426 GFCKAGKVNEAIVIVE 441
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 134/317 (42%), Gaps = 7/317 (2%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
+IRG+ ++ V+ S G + Y ++ + + E+ + K
Sbjct: 212 LIRGLCGVGKAEKAVELLGGMSGFGCL-PDIVTYNTLIKGFCKSNELKKANEMFDDVKSS 270
Query: 87 KDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
S + T +I+ Y KA + A + D+M T ++FN L+ + +
Sbjct: 271 SGCSPDVVTYTSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMHT 330
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
+ + + G PD+V++ ++I + G ++ L EM +G+ + T++ L+
Sbjct: 331 AEEIRGKMI-SFGCFPDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFPNAFTYSILI 389
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEIN 265
R A ++ + + ++ P YN +DG + +A+ +V EM K+
Sbjct: 390 NALCKENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEAIVIVEEMEKKKCK 449
Query: 266 PDVFTFYALIKGFVNEGNLEEAKRWYNKS---GCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
PD TF LI G +G + EA ++K GC +K L+ + + G A++L
Sbjct: 450 PDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL 509
Query: 323 CKRTFSERCLVDQAPLQ 339
+ + + D APL+
Sbjct: 510 NQIAHKGQ-INDGAPLE 525
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 103/243 (42%), Gaps = 13/243 (5%)
Query: 122 NCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDS 181
N + ++N L + + D +F+ + GI P+ ++ +F +KG L
Sbjct: 98 NIRHSFWTYNLLTRSLCKAGMHDLAGQMFECMKSD-GISPNSRLLGFLVSSFAEKGKLHC 156
Query: 182 ANTLL---YEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNA 238
A LL YE+E + N+LL R DA K++E + + +++N
Sbjct: 157 ATALLLQSYEVEGC-----CMVVNSLLNTLVKLDRVEDAMKLFEEHLRFQSCNDTKTFNI 211
Query: 239 RLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN----KS 294
+ GL + +KA+EL+G M PD+ T+ LIKGF L++A ++ S
Sbjct: 212 LIRGLCGVGKAEKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMFDDVKSSS 271
Query: 295 GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA 354
GC + + ++ C+ G + A L ++VD AK + A
Sbjct: 272 GCSPDVVTYTSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMHTA 331
Query: 355 KEL 357
+E+
Sbjct: 332 EEI 334
>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
Length = 801
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 100/196 (51%), Gaps = 4/196 (2%)
Query: 127 VLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLL 186
V+++ AL+ + K D L D G EP+ + Y+ +I F G +DSA +
Sbjct: 444 VVTYGALVDGLCKAHKVDHAHELL-DAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF 502
Query: 187 YEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIE 246
+M K G + T+ +L+ + +GR A K+ M+ + PNV +Y A +DGL
Sbjct: 503 LQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRI 562
Query: 247 KQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY---NKSGCGMNKAIF 303
+++KAL+L+ M K +P+V T+ ALI G G ++ + + ++ GC N +
Sbjct: 563 GESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTY 622
Query: 304 KLLVPFVCEKGDLDFA 319
++L+ +C G LD A
Sbjct: 623 RVLINHLCAAGLLDKA 638
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/391 (20%), Positives = 169/391 (43%), Gaps = 65/391 (16%)
Query: 41 VDKFKKSSDLGR------FRTNTGIYTGTVQRLANAKRFRWIEE--ILEHQKQYKDISKE 92
V KF K+ L + F +T Y+ + L +A + +E+ +L + + ++ +
Sbjct: 266 VGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATK---VEKAFLLFQEMKMVGVTPD 322
Query: 93 GFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE------ 145
+T LI + KA + E A+ +F+EM C TV+++ AL+ A + +K+ +
Sbjct: 323 VYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFH 382
Query: 146 -----------------VDGLFK--------DLPHKL-------------------GIEP 161
VDGL K ++ KL + P
Sbjct: 383 RMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAP 442
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
++V+Y ++ +D A+ LL M G + I ++ L+ GF G+ A++++
Sbjct: 443 NVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF 502
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
M P+V +Y + +D + + + A++++ +M P+V T+ A+I G
Sbjct: 503 LQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRI 562
Query: 282 GNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPL 338
G E+A + + + GC N + L+ + + G +D + +L + + C +
Sbjct: 563 GESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTY 622
Query: 339 QLVVDRLAKELRVEEAKELVELGKTNSYCRY 369
+++++ L +++A+ L+ K + +Y
Sbjct: 623 RVLINHLCAAGLLDKARLLLGEMKQTYWPKY 653
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 108/270 (40%), Gaps = 20/270 (7%)
Query: 107 MFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSY 166
+ + A K++ EM NC ++ KFD+ L K++ K G PD +Y
Sbjct: 233 LLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRK-GFVPDTSTY 291
Query: 167 NTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVN 226
+ +I ++ A L EM+ G+ D+ T+ L+ F G A+ ++E M +
Sbjct: 292 SKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRS 351
Query: 227 MNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEE 286
+ P V +Y A + KQ +A ++ M P+ T+ AL+ G GN+ +
Sbjct: 352 VGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISK 411
Query: 287 AKRWY-------------------NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTF 327
A Y ++ N + LV +C+ +D A L
Sbjct: 412 AFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAML 471
Query: 328 SERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
S C + ++D K +++ A+E+
Sbjct: 472 SSGCEPNHIVYDALIDGFCKAGKIDSAQEV 501
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 73/177 (41%), Gaps = 6/177 (3%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G P V+YN +++ G +D + EM + G +D T GR+ADA
Sbjct: 35 GYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADA 94
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ E + + + + GL +A+ + MR P+V T+ L+ G
Sbjct: 95 LDMIE---REDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSG 151
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERC 331
F+ + L KR N GC N ++F LV C + D +A+ L R + C
Sbjct: 152 FLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGC 208
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 119/303 (39%), Gaps = 49/303 (16%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I G K + + F + + G + + YT + R+ R ++L +
Sbjct: 484 ALIDGFCKAGKIDSAQEVFLQMTKCG-YLPSVHTYTSLIDRMFKDGRLDLAMKVL--SQM 540
Query: 86 YKDISKEG---FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKK 142
KD +TA + L + E A K+ M + C V+++ AL+ + K
Sbjct: 541 LKDSCTPNVVTYTAMIDGL-CRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGK 599
Query: 143 FDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKK---------- 192
D LF + K G P+ V+Y +I G LD A LL EM++
Sbjct: 600 IDLSLDLFTQMSRK-GCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYR 658
Query: 193 --------------GIRLDLITFNTLLLG---------FYSNGRFADAEKIWETMVNM-- 227
GI ++ ++ T+ + F GR A ++ + M+ +
Sbjct: 659 CAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPS 718
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+V+ + Y + + L + Q ++A L EM + P++ F LIKG V E
Sbjct: 719 SVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLV------EV 772
Query: 288 KRW 290
K+W
Sbjct: 773 KKW 775
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 77/202 (38%), Gaps = 9/202 (4%)
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
D V +I ++ D A + L+ M +++T+ TLL GF + ++I
Sbjct: 106 DTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRII 165
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
M+ PN +N+ + EK A +L+ M + P + I +
Sbjct: 166 NMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQ 225
Query: 282 GNLEE------AKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCL 332
L A++ Y + + C +NK +C G D AF L K + +
Sbjct: 226 EKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFV 285
Query: 333 VDQAPLQLVVDRLAKELRVEEA 354
D + V+ L +VE+A
Sbjct: 286 PDTSTYSKVITFLCHATKVEKA 307
>gi|414885390|tpg|DAA61404.1| TPA: hypothetical protein ZEAMMB73_280584 [Zea mays]
Length = 645
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 108/218 (49%), Gaps = 4/218 (1%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A++V+D+M + + V+++ ++ A + + LF D + G++P+ +YN ++
Sbjct: 205 AQEVWDQMVAQQIDPNVVTYTTMICALCEEGCIGDAERLF-DAMKEAGMQPNQYTYNVLM 263
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
+ ++SA L E+ K G+ + + F TL+ GF RF++A+ ++ M V
Sbjct: 264 SGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVA 323
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
P V YN+ +DG ++AL L EM + PD FT +++G + G + A R+
Sbjct: 324 PTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRF 383
Query: 291 ---YNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKR 325
+ G +N A + L+ C G+L+ A C R
Sbjct: 384 LQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALATCTR 421
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 130/285 (45%), Gaps = 20/285 (7%)
Query: 38 KRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTAR 97
+RL D K++ T + +G QR +++ Y+++ K G
Sbjct: 241 ERLFDAMKEAGMQPNQYTYNVLMSGHCQR----------DDVNSAVVLYQELLKSGLNPN 290
Query: 98 ------LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFK 151
LI + KA F A+ +F EMP TV +N+L+ S E L++
Sbjct: 291 AVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQ 350
Query: 152 DLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSN 211
++ +LG+ PD + + +++ D G + A+ L +++ G+ L+ +N L+ +
Sbjct: 351 EM-TRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRI 409
Query: 212 GRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTF 271
G +A M + + PNV SY++ +DG + + + A+ + EM +K I P+V T+
Sbjct: 410 GNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTY 469
Query: 272 YALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEK 313
ALI G G ++ A R + ++G N +LV +C +
Sbjct: 470 TALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRE 514
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 78/158 (49%), Gaps = 1/158 (0%)
Query: 131 NALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEME 190
NA+L V +++ LF ++ + G+ P +V+YNT+I A +G++ A + +M
Sbjct: 155 NAVLDGLVKARRPGCAWELFDEMLRR-GLVPSVVTYNTLINACRFQGTVAKAQEVWDQMV 213
Query: 191 KKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTK 250
+ I +++T+ T++ G DAE++++ M ++PN +YN + G
Sbjct: 214 AQQIDPNVVTYTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVN 273
Query: 251 KALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
A+ L E+ +NP+ F LI GF EAK
Sbjct: 274 SAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAK 311
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 69/155 (44%), Gaps = 3/155 (1%)
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
P L + N ++ V A L EM ++G+ ++T+NTL+ G A A+++
Sbjct: 149 PALPACNAVLDGLVKARRPGCAWELFDEMLRRGLVPSVVTYNTLINACRFQGTVAKAQEV 208
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
W+ MV + PNV +Y + L E A L M+ + P+ +T+ L+ G
Sbjct: 209 WDQMVAQQIDPNVVTYTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQ 268
Query: 281 EGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCE 312
++ A Y KSG N IF L+ C+
Sbjct: 269 RDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGFCK 303
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 119/284 (41%), Gaps = 21/284 (7%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEH-QK 84
S++ G ++ N + + +++ + LG + + V+ L + + + L+ Q+
Sbjct: 331 SLMDGAFRSGNAQEALALYQEMTRLG-LCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQE 389
Query: 85 QYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
+++ + A LI Y + E A M E V+S+++L+ K
Sbjct: 390 DGVNLNAAAYNA-LIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQ 448
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
++ ++ K GIEP++V+Y +I G +D+A L EM + GI + IT + L
Sbjct: 449 IAMAIYTEMVAK-GIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVL 507
Query: 205 LLGFYSNGRFADAEK------------IWETMVNMNVR-----PNVRSYNARLDGLAIEK 247
+ G R +A + I N + PN Y + GL ++
Sbjct: 508 VDGLCRENRVQEAVRFVMEYSGLKCSDIHSVFSNFTIEEECLIPNSVIYMTLIYGLYLDG 567
Query: 248 QTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY 291
Q +A +L MR + PD FT+ LI+G G + A Y
Sbjct: 568 QHCEAGKLFSYMRKSGMIPDSFTYTLLIRGQCMLGYVLNAMMLY 611
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 46/260 (17%), Positives = 100/260 (38%), Gaps = 25/260 (9%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
V+RG+ + + D+F + N Y + R +EE L +
Sbjct: 367 VVRGLCDGGQM-HVADRFLQGVQEDGVNLNAAAYNALIDEYC---RIGNLEEALATCTRM 422
Query: 87 KDISKEGFT---ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKF 143
++ E + LI + K + A ++ EM + E V+++ AL+ +
Sbjct: 423 TEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGI 482
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE--------------- 188
D L K++ GI P+ ++ + ++ + + A + E
Sbjct: 483 DAAFRLHKEMIEN-GISPNAITVSVLVDGLCRENRVQEAVRFVMEYSGLKCSDIHSVFSN 541
Query: 189 --MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIE 246
+E++ + + + + TL+ G Y +G+ +A K++ M + P+ +Y + G +
Sbjct: 542 FTIEEECLIPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRKSGMIPDSFTYTLLIRGQCML 601
Query: 247 KQTKKALELVGEMRSKEINP 266
A+ L +M + P
Sbjct: 602 GYVLNAMMLYADMMKIGVKP 621
>gi|357460285|ref|XP_003600424.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355489472|gb|AES70675.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 393
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 123/248 (49%), Gaps = 10/248 (4%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
AR V M + E ++++N+L+ K+ ++ LF + + G+ P++ SY +I
Sbjct: 142 ARNVLAIMIKQRVEPNIVTYNSLMDGYFLVKEVNKAKQLFNTISLR-GMTPNVRSYKVMI 200
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
+D A L EM K + D + +N+L+ G + R D +W+ + M+ R
Sbjct: 201 NGLCKNKMVDEAANLFKEMHSKNMVPDTVAYNSLIDGLCKSRRIYD---VWDFIGEMHDR 257
Query: 231 ---PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
N+ +YN+ LDGL Q KA+ L+ +++++ I P+++T+ L+ G G L +A
Sbjct: 258 GQPANIITYNSLLDGLCKNHQVDKAITLLTKIKNQGIRPNIYTYTILVDGLCKNGRLRDA 317
Query: 288 KRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDR 344
+ Y G ++ I+ +++ +C++G LD A +L + +C D ++ +
Sbjct: 318 QEVYQDLLNKGYQLDARIYTVMINGLCKEGFLDEALSLLSKMEDNKCTPDGVTYEITIRA 377
Query: 345 LAKELRVE 352
L + R E
Sbjct: 378 LFESDRNE 385
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 105/220 (47%), Gaps = 17/220 (7%)
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL---------- 205
+L ++PD+V YNTII + L EM K I D++T+NTL+
Sbjct: 32 RLLVKPDVVMYNTIIDILCKDKLVSDGCDLYSEMIDKKIYPDVVTYNTLIYSLLNFVYIK 91
Query: 206 ----LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS 261
GF G+ +A + M + V PN+R++ +DGL + + KKA ++ M
Sbjct: 92 IRKEYGFSILGQMKEAVGLLNQMTSKTVTPNIRTFTTLVDGLCKDGEVKKARNVLAIMIK 151
Query: 262 KEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDF 318
+ + P++ T+ +L+ G+ + +AK+ +N G N +K+++ +C+ +D
Sbjct: 152 QRVEPNIVTYNSLMDGYFLVKEVNKAKQLFNTISLRGMTPNVRSYKVMINGLCKNKMVDE 211
Query: 319 AFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
A NL K S+ + D ++D L K R+ + + +
Sbjct: 212 AANLFKEMHSKNMVPDTVAYNSLIDGLCKSRRIYDVWDFI 251
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 125/281 (44%), Gaps = 22/281 (7%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN--------------SKKF 143
+I + K + + ++ EM + V+++N L+ + +N +
Sbjct: 45 IIDILCKDKLVSDGCDLYSEMIDKKIYPDVVTYNTLIYSLLNFVYIKIRKEYGFSILGQM 104
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT 203
E GL + K + P++ ++ T++ G + A +L M K+ + +++T+N+
Sbjct: 105 KEAVGLLNQMTSK-TVTPNIRTFTTLVDGLCKDGEVKKARNVLAIMIKQRVEPNIVTYNS 163
Query: 204 LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
L+ G++ A++++ T+ + PNVRSY ++GL K +A L EM SK
Sbjct: 164 LMDGYFLVKEVNKAKQLFNTISLRGMTPNVRSYKVMINGLCKNKMVDEAANLFKEMHSKN 223
Query: 264 INPDVFTFYALIKGFVNEGNLEEAKRW-----YNKSGCGMNKAIFKLLVPFVCEKGDLDF 318
+ PD + +LI G + + W + G N + L+ +C+ +D
Sbjct: 224 MVPDTVAYNSLIDGLCKSRRIYDV--WDFIGEMHDRGQPANIITYNSLLDGLCKNHQVDK 281
Query: 319 AFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
A L + ++ + ++VD L K R+ +A+E+ +
Sbjct: 282 AITLLTKIKNQGIRPNIYTYTILVDGLCKNGRLRDAQEVYQ 322
>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
Length = 1107
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 119/255 (46%), Gaps = 4/255 (1%)
Query: 106 AMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVS 165
M E A + F +M S N LL K D+V FKD+ G P + +
Sbjct: 74 GMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGA-GARPTVFT 132
Query: 166 YNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMV 225
YN +I +G +++A L EM+ +G+ D +T+N+++ GF GR D +E M
Sbjct: 133 YNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMK 192
Query: 226 NMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLE 285
+M P+V +YNA ++ + LE EM+ + P+V ++ L+ F EG ++
Sbjct: 193 DMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQ 252
Query: 286 EAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVV 342
+A ++Y + G N+ + L+ C+ G+L AF L + ++
Sbjct: 253 QAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALI 312
Query: 343 DRLAKELRVEEAKEL 357
D L R++EA+EL
Sbjct: 313 DGLCDAERMKEAEEL 327
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 104/196 (53%), Gaps = 1/196 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I +GK ++ F+EM CE V+++NAL+ K ++++
Sbjct: 171 MIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGN- 229
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++P++VSY+T++ AF +G + A +M + G+ + T+ +L+ G +DA
Sbjct: 230 GLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDA 289
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ M+ + V NV +Y A +DGL ++ K+A EL G+M + + P++ ++ ALI G
Sbjct: 290 FRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHG 349
Query: 278 FVNEGNLEEAKRWYNK 293
FV N++ A N+
Sbjct: 350 FVKAKNMDRALELLNE 365
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 128/284 (45%), Gaps = 11/284 (3%)
Query: 84 KQYKDISKEGFT------ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGAC 137
K Y D+ + G LI K +A ++ +EM E V+++ AL+
Sbjct: 256 KFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGL 315
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLD 197
++++ E + LF + G+ P+L SYN +I FV ++D A LL E++ +GI+ D
Sbjct: 316 CDAERMKEAEELFGKM-DTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPD 374
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
L+ + T + G S + A+ + M ++ N Y +D + L L+
Sbjct: 375 LLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLD 434
Query: 258 EMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS----GCGMNKAIFKLLVPFVCEK 313
EM+ +I V TF LI G + +A ++N+ G N AIF ++ +C+
Sbjct: 435 EMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKD 494
Query: 314 GDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
++ A L ++ + + D+ ++D K+ V EA L
Sbjct: 495 NQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALAL 538
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 103/213 (48%), Gaps = 4/213 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K + + EM G + V+S++ L+ A + + D+ ++
Sbjct: 206 LINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDM-RRV 264
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ P+ +Y ++I A G+L A L EM + G+ +++T+ L+ G R +A
Sbjct: 265 GLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEA 324
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
E+++ M V PN+ SYNA + G K +ALEL+ E++ + I PD+ + I G
Sbjct: 325 EELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWG 384
Query: 278 FVNEGNLEEAKRWYNK-SGCGM--NKAIFKLLV 307
+ +E AK N+ CG+ N I+ L+
Sbjct: 385 LCSLEKIEAAKVVMNEMKECGIKANSLIYTTLM 417
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 118/263 (44%), Gaps = 3/263 (1%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I G K N+ R ++ + G + + +Y + L + ++ + ++ K+
Sbjct: 345 ALIHGFVKAKNMDRALELLNELKGRG-IKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKE 403
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFD 144
+ L+ Y K+ + DEM + E TV++F L+ G C N
Sbjct: 404 CGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSK 463
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
VD F + + G++ + + +I +++A TL +M +KG+ D + +L
Sbjct: 464 AVD-YFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSL 522
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+ G + G +A + + M + ++ ++ +Y + + GL+ Q +KA + EM + I
Sbjct: 523 MDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGI 582
Query: 265 NPDVFTFYALIKGFVNEGNLEEA 287
+PD +++K G ++EA
Sbjct: 583 HPDEVLCISVLKKHYELGCIDEA 605
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 83/197 (42%), Gaps = 3/197 (1%)
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
P ++ + +D G L+ A +M++ + + N LL F G+ D ++
Sbjct: 58 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 117
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
++ M+ RP V +YN +D + E + A L EM+ + + PD T+ ++I GF
Sbjct: 118 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 177
Query: 281 EGNLEEAKRWYNKSG---CGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAP 337
G L++ ++ + C + + L+ C+ G L + +
Sbjct: 178 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 237
Query: 338 LQLVVDRLAKELRVEEA 354
+VD KE +++A
Sbjct: 238 YSTLVDAFCKEGMMQQA 254
>gi|255660818|gb|ACU25578.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
Length = 418
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 141/313 (45%), Gaps = 4/313 (1%)
Query: 5 SRLLSCSFSTTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTV 64
S + + T T ++ S + Y E+ R + + + +FR +
Sbjct: 49 SAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVL 108
Query: 65 QRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCE 124
+ L K F+ + E + + F L+ + K A+ VFD +
Sbjct: 109 EHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLR 168
Query: 125 QTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANT 184
+V+SFN L+ + +E L K+ G++PD+ +Y+ +I + LD AN
Sbjct: 169 PSVVSFNTLMNGYIKLGDLNEGFRL-KNAMQASGVQPDVYTYSVLINGLCKESKLDDANE 227
Query: 185 LLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLA 244
L EM G+ + ++F TL+ G +GR A +I++ M++ ++ P++ +YN + GL
Sbjct: 228 LFDEMLDNGLVPNSVSFTTLIDGHCKDGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLC 287
Query: 245 IEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA---KRWYNKSGCGMNKA 301
K+A +L+ EM K + PD T+ LI G EG+LE A ++ K ++
Sbjct: 288 KNGDLKQAQDLINEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDV 347
Query: 302 IFKLLVPFVCEKG 314
+ L+ +C++G
Sbjct: 348 AYTALISGLCQEG 360
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 84/173 (48%), Gaps = 1/173 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K + A +++ +M ++ ++++N L+ + + L ++ K
Sbjct: 247 LIDGHCKDGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSMK- 305
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD ++Y T+I +G L++A M K+ IRLD + + L+ G GR DA
Sbjct: 306 GLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDA 365
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
EK+ M+++ ++P + +Y ++ + +L+ EM+ P V T
Sbjct: 366 EKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVT 418
>gi|255660828|gb|ACU25583.1| pentatricopeptide repeat-containing protein [Lantana canescens]
Length = 418
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 131/273 (47%), Gaps = 26/273 (9%)
Query: 66 RLANAKRFRWI-----EEILEHQKQ----------YKDISKEGFTARL------IALYGK 104
RL +F W+ ++LEH + Y++I + G+ A L + + K
Sbjct: 90 RLTREHKF-WVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCK 148
Query: 105 AAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLV 164
A+ VFD + +V+S+N L+ + DE L K G++PD+
Sbjct: 149 DGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL-KSAMLASGVQPDVY 207
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
+Y+ +I + +D AN L EM KG+ + +TF TL+ G NGR A +I++ M
Sbjct: 208 TYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 267
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
++ ++ P++ +YN + GL + K+A L+ EM K + PD T+ LI G EG+L
Sbjct: 268 LSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDL 327
Query: 285 EEA---KRWYNKSGCGMNKAIFKLLVPFVCEKG 314
+ A ++ + +++ + L +C++G
Sbjct: 328 DSAFEHRKRMIQENIRLDEVAYTALXSGLCQEG 360
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 84/173 (48%), Gaps = 1/173 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K + A +++ +M ++ ++++N L+ + L ++ K
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVK- 305
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD ++Y T+I +G LDSA M ++ IRLD + + L G GR DA
Sbjct: 306 GLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALXSGLCQEGRSVDA 365
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFT 270
EK+ M+++ ++P+ R+Y ++ + K +L+ EM+ P V T
Sbjct: 366 EKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVT 418
>gi|224077524|ref|XP_002305285.1| predicted protein [Populus trichocarpa]
gi|222848249|gb|EEE85796.1| predicted protein [Populus trichocarpa]
Length = 523
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 104/218 (47%), Gaps = 7/218 (3%)
Query: 84 KQYKDISKEGFTAR------LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGAC 137
+Q+ D K F A+ L+ +G ARKVFDEM GR C VL++N+LL A
Sbjct: 203 QQFFDRVKHKFEAKAKTYSILVRGWGDIGEAVEARKVFDEMRGRGCALDVLAYNSLLEAL 262
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLD 197
DE +F+++ G+EPD SY I+A+ + ++ S ++L M++ + +
Sbjct: 263 CKGGNVDEAYKMFREIGSH-GVEPDACSYAIFIRAYCEANNIHSVFSVLDRMKRYDLVPN 321
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
+ T+N ++ NG+ DA ++ M+ V P+ SYN L + +A +L+
Sbjct: 322 VFTYNCIIKKLCKNGKVEDAYQLLHEMMERGVSPDAWSYNTILAYHCEHSEVNRATKLIS 381
Query: 258 EMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSG 295
M PD ++ L+K V G + A + G
Sbjct: 382 IMVKDNCLPDRHSYNMLLKLLVRVGRFDRATEIWESMG 419
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 111/261 (42%), Gaps = 5/261 (1%)
Query: 102 YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEP 161
Y +A + +A + FD M +V + LL K F + HK E
Sbjct: 158 YSRANLPSDAIRAFDRMAEFGLRPSVDDLDKLLYVLCKCKHVKCAQQFFDRVKHKF--EA 215
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
+Y+ +++ + D G A + EM +G LD++ +N+LL G +A K++
Sbjct: 216 KAKTYSILVRGWGDIGEAVEARKVFDEMRGRGCALDVLAYNSLLEALCKGGNVDEAYKMF 275
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
+ + V P+ SY + ++ M+ ++ P+VFT+ +IK
Sbjct: 276 REIGSHGVEPDACSYAIFIRAYCEANNIHSVFSVLDRMKRYDLVPNVFTYNCIIKKLCKN 335
Query: 282 GNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPL 338
G +E+A + ++ G + + ++ + CE +++ A L + CL D+
Sbjct: 336 GKVEDAYQLLHEMMERGVSPDAWSYNTILAYHCEHSEVNRATKLISIMVKDNCLPDRHSY 395
Query: 339 QLVVDRLAKELRVEEAKELVE 359
+++ L + R + A E+ E
Sbjct: 396 NMLLKLLVRVGRFDRATEIWE 416
>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 106/207 (51%), Gaps = 4/207 (1%)
Query: 113 KVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKA 172
K+ D M + C +++N ++ K D+ L + + P+ V+Y T+I
Sbjct: 279 KLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCV-PNDVTYGTLING 337
Query: 173 FVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPN 232
V +G LL +E++G + ++TL+ G + + +A +W+ MV +PN
Sbjct: 338 LVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPN 397
Query: 233 VRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN 292
+ Y+A +DGL E + +A E++ EM +K P+ FT+ +LIKGF GN ++A R +
Sbjct: 398 IVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWK 457
Query: 293 ---KSGCGMNKAIFKLLVPFVCEKGDL 316
K+ C N+ + +L+ +CE G L
Sbjct: 458 EMAKNNCVPNEICYSVLIHGLCEDGKL 484
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 112/226 (49%), Gaps = 6/226 (2%)
Query: 129 SFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
+++ L+ +K +E GL+K + K G +P++V Y+ +I +G LD A +L E
Sbjct: 365 AYSTLISGLFKEEKSEEAMGLWKKMVEK-GCQPNIVVYSALIDGLCREGKLDEAKEILCE 423
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
M KG + T+++L+ GF+ G A ++W+ M N PN Y+ + GL + +
Sbjct: 424 MVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGK 483
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKA-----IF 303
++A+ + M + + PDV + ++I G N G++E + +N+ C + + +
Sbjct: 484 LREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTY 543
Query: 304 KLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKEL 349
+L+ +C++ + A +L C D + ++ L ++L
Sbjct: 544 NILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKL 589
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 153/355 (43%), Gaps = 40/355 (11%)
Query: 44 FKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYG 103
FK +S +G +++ + ++ AN+ F + ++ + K+ + + E + YG
Sbjct: 67 FKSASQMGSYKSGDSTFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRAYG 126
Query: 104 KAAMFENARKVFDEMPGR-NCEQTVLSFNALLGACVNSKKFDEVDGLFK-DLPHKLGIEP 161
KA + E A ++F M C +TV SFN++L + F ++ + K I P
Sbjct: 127 KAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISP 186
Query: 162 DLVSYNTIIKAFVDKG-----------------------------------SLDSANTLL 186
+++S+N +IKA G +D A LL
Sbjct: 187 NVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLL 246
Query: 187 YEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIE 246
EM+ +G +TFN L+ G G K+ + M PN +YN ++GL ++
Sbjct: 247 DEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLK 306
Query: 247 KQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIF 303
+ KA+ L+ M + + P+ T+ LI G V +G + + + G N+ +
Sbjct: 307 GKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAY 366
Query: 304 KLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
L+ + ++ + A L K+ + C + ++D L +E +++EAKE++
Sbjct: 367 STLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEIL 421
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 102/214 (47%), Gaps = 10/214 (4%)
Query: 76 IEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLG 135
+EE H +Y + LI+ K E A ++ +M + C+ ++ ++AL+
Sbjct: 354 LEERGHHANEYA-------YSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALID 406
Query: 136 ACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIR 195
K DE + ++ +K G P+ +Y+++IK F G+ A + EM K
Sbjct: 407 GLCREGKLDEAKEILCEMVNK-GCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCV 465
Query: 196 LDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALEL 255
+ I ++ L+ G +G+ +A +W M+ +RP+V +Y++ + GL + L+L
Sbjct: 466 PNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKL 525
Query: 256 VGEMRSKEIN--PDVFTFYALIKGFVNEGNLEEA 287
EM +E + PDV T+ L++ + ++ A
Sbjct: 526 FNEMLCQESDSQPDVVTYNILLRALCKQNSISHA 559
>gi|302768589|ref|XP_002967714.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
gi|300164452|gb|EFJ31061.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
Length = 384
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 128/277 (46%), Gaps = 8/277 (2%)
Query: 23 FIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEH 82
I +R K ++ RL++ K+S + + +Y V L N+ R E+IL+
Sbjct: 23 IIHGYLRQKSKLDHALRLLEVMKESGK----KPDEILYNCLVNGLVNSGRLEAAEKILDD 78
Query: 83 QKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKK 142
K+ K + LI Y ++ RK+F EM + ++NAL+
Sbjct: 79 MKRDKVSANLVTYTNLIKEYANTGRLQDCRKLFQEMKDKGESPNSWTYNALIQGYGRKGL 138
Query: 143 FDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFN 202
F E L+ ++ +G D+ +YN I + +G L+ LL EM+ KG+ D +T+N
Sbjct: 139 FKEALELYDEMD-GVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPPDQVTYN 197
Query: 203 TLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
TLL + F A +I M RPN+ +YN L E+ +A +L ++SK
Sbjct: 198 TLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENLKSK 257
Query: 263 EINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGC 296
+ P++ T+ A++ + G EA + ++ ++GC
Sbjct: 258 GVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGC 294
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 127/273 (46%), Gaps = 8/273 (2%)
Query: 38 KRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTAR 97
++++D K+ + N YT ++ AN R + ++ + K +
Sbjct: 73 EKILDDMKRD----KVSANLVTYTNLIKEYANTGRLQDCRKLFQEMKDKGESPNSWTYNA 128
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI YG+ +F+ A +++DEM G C + V ++N + ++++ L ++ K
Sbjct: 129 LIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDEMDTK- 187
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ PD V+YNT++ + K A+ +L EM + G R ++ T+N +L A+A
Sbjct: 188 GVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQSVAEA 247
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+++E + + V PN+ +Y+A L +A +L EM P + + LI+
Sbjct: 248 TQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCIIAYSGLIES 307
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLV 307
+ + G +EA + KSG + I+ L+
Sbjct: 308 YGHHGMYQEALACFQDMRKSGIVPDTKIYTALM 340
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 90/180 (50%), Gaps = 2/180 (1%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSK-KFDEVDGLFKDLPHKLGIEPDLVSYNTI 169
A +F M CE TV+++ ++ + K K D L + + G +PD + YN +
Sbjct: 1 ACSLFYRMMKDGCEATVVTYTVIIHGYLRQKSKLDHALRLLEVMKES-GKKPDEILYNCL 59
Query: 170 IKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV 229
+ V+ G L++A +L +M++ + +L+T+ L+ + + GR D K+++ M +
Sbjct: 60 VNGLVNSGRLEAAEKILDDMKRDKVSANLVTYTNLIKEYANTGRLQDCRKLFQEMKDKGE 119
Query: 230 RPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
PN +YNA + G + K+ALEL EM DV T+ I + G LE+ +R
Sbjct: 120 SPNSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMER 179
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 61/117 (52%), Gaps = 1/117 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+++LYG+ ++ A K++DEM C +++++ L+ + + + E F+D+ K
Sbjct: 269 MLSLYGRHGLYTEAAKLWDEMIEAGCIPCIIAYSGLIESYGHHGMYQEALACFQDM-RKS 327
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRF 214
GI PD Y ++ A+ G A L +EM K+G D IT+ L+ F + GR
Sbjct: 328 GIVPDTKIYTALMDAYGKAGRCREAELLYFEMTKEGFVPDGITYGILVRAFANAGRL 384
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/127 (19%), Positives = 58/127 (45%), Gaps = 1/127 (0%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A ++F+ + + +++++A+L + E L+ ++ + G P +++Y+ +I
Sbjct: 247 ATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMI-EAGCIPCIIAYSGLI 305
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
+++ G A +M K GI D + L+ + GR +AE ++ M
Sbjct: 306 ESYGHHGMYQEALACFQDMRKSGIVPDTKIYTALMDAYGKAGRCREAELLYFEMTKEGFV 365
Query: 231 PNVRSYN 237
P+ +Y
Sbjct: 366 PDGITYG 372
>gi|242061542|ref|XP_002452060.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
gi|241931891|gb|EES05036.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
Length = 674
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 140/319 (43%), Gaps = 43/319 (13%)
Query: 77 EEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGA 136
E +LE + + +TA LI Y ++ +A ++ MP ++N +L
Sbjct: 173 ERVLEAARASGAANVVTYTA-LIDGYCRSGRLTDALRLIASMP---VAPDTYTYNTVLKG 228
Query: 137 CVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRL 196
+K+++E + L +++ P+ V++ T I+AF G LD A LL +M K G
Sbjct: 229 LCFAKQWEEAEELMREMIRN-NCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCMP 287
Query: 197 DLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELV 256
D++ ++TL+ GF +GR DA K+ TM+ RPN YNA L GL I + + EL+
Sbjct: 288 DVVIYSTLVNGFSEHGRVDDALKLLSTML---CRPNTVCYNAALKGLCIAGRWDEVGELI 344
Query: 257 GEMRSKE-----------IN------------------------PDVFTFYALIKGFVNE 281
EM K+ IN PDV ++ +I F +
Sbjct: 345 AEMVRKDCPPNDATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIISCFSEQ 404
Query: 282 GNLEEAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLV 341
++A + N C + F ++ +C A L + E C ++ ++
Sbjct: 405 ACADDALKLLNSMLCKPDTISFNAVLKCLCRAERWYDAAELMAKMLKEDCHTNEMTFNIL 464
Query: 342 VDRLAKELRVEEAKELVEL 360
+D L + +V++A E+ EL
Sbjct: 465 IDSLCQNGQVKDAIEMFEL 483
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 130/317 (41%), Gaps = 42/317 (13%)
Query: 78 EILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GA 136
E+LE +Y + + L+ + + ++A K+ M C + +NA L G
Sbjct: 275 ELLEQMPKYGCMPDVVIYSTLVNGFSEHGRVDDALKLLSTM---LCRPNTVCYNAALKGL 331
Query: 137 CVNSKKFDEVDGLF-----KDLP-----------------------------HKLGIEPD 162
C+ + ++DEV L KD P K G PD
Sbjct: 332 CI-AGRWDEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPD 390
Query: 163 LVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWE 222
+VSYNTII F ++ D A LL M K D I+FN +L R+ DA ++
Sbjct: 391 VVSYNTIISCFSEQACADDALKLLNSMLCKP---DTISFNAVLKCLCRAERWYDAAELMA 447
Query: 223 TMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEG 282
M+ + N ++N +D L Q K A+E+ M PD+ T+ +LI GF +G
Sbjct: 448 KMLKEDCHTNEMTFNILIDSLCQNGQVKDAIEMFELMPKYRCTPDIVTYSSLINGFSEQG 507
Query: 283 NLEEAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVV 342
+ A + C + + + +C D A L ++ CL ++ +++
Sbjct: 508 LDKVAFDLFRSMPCRADIFSYNATLKGLCMAARWDDAGELIADMVTKDCLPNEVTFNILI 567
Query: 343 DRLAKELRVEEAKELVE 359
+ L ++ V A E+ E
Sbjct: 568 NSLCQKGLVNRAIEVYE 584
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 108/209 (51%), Gaps = 6/209 (2%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGA-CVNSKKFDEVDGLFKDLPHKLGIEPD 162
+A + +A ++ +M +C ++FN L+ + C N + D ++ +F+ +P K PD
Sbjct: 435 RAERWYDAAELMAKMLKEDCHTNEMTFNILIDSLCQNGQVKDAIE-MFELMP-KYRCTPD 492
Query: 163 LVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWE 222
+V+Y+++I F ++G A L M R D+ ++N L G R+ DA ++
Sbjct: 493 IVTYSSLINGFSEQGLDKVAFDLFRSMP---CRADIFSYNATLKGLCMAARWDDAGELIA 549
Query: 223 TMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEG 282
MV + PN ++N ++ L + +A+E+ +M I PD+FT+ ALI G+ +G
Sbjct: 550 DMVTKDCLPNEVTFNILINSLCQKGLVNRAIEVYEQMPKYGITPDIFTYNALINGYSEQG 609
Query: 283 NLEEAKRWYNKSGCGMNKAIFKLLVPFVC 311
L++A ++ + C + + ++ +C
Sbjct: 610 CLDDALKFLSTMPCEPDTISYNSILKGLC 638
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 68/128 (53%), Gaps = 4/128 (3%)
Query: 105 AAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLV 164
AA +++A ++ +M ++C ++FN L+ + + +++ +P K GI PD+
Sbjct: 538 AARWDDAGELIADMVTKDCLPNEVTFNILINSLCQKGLVNRAIEVYEQMP-KYGITPDIF 596
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
+YN +I + ++G LD A L M + D I++N++L G R+ DAEK+ M
Sbjct: 597 TYNALINGYSEQGCLDDALKFLSTMPCEP---DTISYNSILKGLCRAERWKDAEKLVTEM 653
Query: 225 VNMNVRPN 232
+ N PN
Sbjct: 654 LRKNCTPN 661
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 70/177 (39%), Gaps = 8/177 (4%)
Query: 25 GSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQK 84
S+I G ++ K D F+ R + Y T++ L A R+ E++
Sbjct: 497 SSLINGFSEQGLDKVAFDLFRSMP----CRADIFSYNATLKGLCMAARWDDAGELIADMV 552
Query: 85 QYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
+ E LI + + A +V+++MP + ++NAL+ D
Sbjct: 553 TKDCLPNEVTFNILINSLCQKGLVNRAIEVYEQMPKYGITPDIFTYNALINGYSEQGCLD 612
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITF 201
+ +P EPD +SYN+I+K A L+ EM +K + +TF
Sbjct: 613 DALKFLSTMP----CEPDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTF 665
>gi|2462828|gb|AAB72163.1| hypothetical protein [Arabidopsis thaliana]
Length = 1152
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 98/196 (50%), Gaps = 5/196 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI + K E AR+ +M T SFN L+ FD+ G+ ++ +
Sbjct: 316 LINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNA- 374
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
GI P +YN I A D G +D A LL M D++++NTL+ G+ G+F +A
Sbjct: 375 GIYPTTSTYNIYICALCDFGRIDDARELLSSMAAP----DVVSYNTLMHGYIKMGKFVEA 430
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+++ + ++ P++ +YN +DGL + A L EM ++ I PDV T+ L+KG
Sbjct: 431 SLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKG 490
Query: 278 FVNEGNLEEAKRWYNK 293
FV GNL A Y++
Sbjct: 491 FVKNGNLSMATEVYDE 506
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 117/256 (45%), Gaps = 8/256 (3%)
Query: 107 MFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSY 166
M A V++ M TV++FN +L +C + + VD ++ ++ + IE V+Y
Sbjct: 255 MMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRR-NIEFSEVTY 313
Query: 167 NTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVN 226
N +I F G ++ A +M + G + +FN L+ G+ G F DA + + M+N
Sbjct: 314 NILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLN 373
Query: 227 MNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEE 286
+ P +YN + L + A EL+ M + PDV ++ L+ G++ G E
Sbjct: 374 AGIYPTTSTYNIYICALCDFGRIDDARELLSSMAA----PDVVSYNTLMHGYIKMGKFVE 429
Query: 287 AKRWYNKSGCG-MNKAI--FKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVD 343
A ++ G ++ +I + L+ +CE G+L+ A L + ++ D +V
Sbjct: 430 ASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVK 489
Query: 344 RLAKELRVEEAKELVE 359
K + A E+ +
Sbjct: 490 GFVKNGNLSMATEVYD 505
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 119/272 (43%), Gaps = 15/272 (5%)
Query: 81 EHQKQYKDISKEGFTAR------LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL 134
E ++ + D+ + GF LI Y K +F++A V DEM T ++N +
Sbjct: 328 EARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYI 387
Query: 135 GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGI 194
A + + D+ L + PD+VSYNT++ ++ G A+ L ++ I
Sbjct: 388 CALCDFGRIDDARELLSSMA-----APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDI 442
Query: 195 RLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALE 254
++T+NTL+ G +G A+++ E M + P+V +Y + G A E
Sbjct: 443 HPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATE 502
Query: 255 LVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKA----IFKLLVPFV 310
+ EM K I PD + + G + G+ ++A R + + + A I+ + + +
Sbjct: 503 VYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGL 562
Query: 311 CEKGDLDFAFNLCKRTFSERCLVDQAPLQLVV 342
C+ G+L A ++ F + D V+
Sbjct: 563 CKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVI 594
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 79/155 (50%), Gaps = 3/155 (1%)
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
PDL YN I G+L A ++ + G+ D +T+ T++ G+ NG+F A +
Sbjct: 550 PDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNL 609
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
++ M+ + P+V +Y + G A + ++A + EM+ + + P+V T AL+ G
Sbjct: 610 YDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCK 669
Query: 281 EGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCE 312
GN++EA R+ K G NK + +L+ C+
Sbjct: 670 AGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCD 704
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 67/136 (49%)
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
++G+ PD V+Y T+I+ +++ G A L EM +K + +IT+ L+ G GR
Sbjct: 580 RVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLE 639
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
A + M VRPNV ++NA L G+ +A + +M + I P+ +++ LI
Sbjct: 640 QAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLI 699
Query: 276 KGFVNEGNLEEAKRWY 291
+ EE + Y
Sbjct: 700 SKNCDFEKWEEVVKLY 715
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 80/168 (47%), Gaps = 3/168 (1%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G P + + N ++K D ++ A+ + M + GI +ITFNT+L + G
Sbjct: 235 GFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERV 294
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+KIW M N+ + +YN ++G + + ++A G+MR ++F LI+G
Sbjct: 295 DKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEG 354
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
+ +G ++A ++ +G + + + + +C+ G +D A L
Sbjct: 355 YCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDAREL 402
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 70/157 (44%), Gaps = 3/157 (1%)
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
A ++ETM+ + P V ++N LD ++ ++ EM+ + I T+ LI
Sbjct: 259 ASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILIN 318
Query: 277 GFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV 333
GF G +EEA+R++ +SG + F L+ C++G D A+ + +
Sbjct: 319 GFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYP 378
Query: 334 DQAPLQLVVDRLAKELRVEEAKELVELGKTNSYCRYN 370
+ + + L R+++A+EL+ YN
Sbjct: 379 TTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYN 415
>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
Length = 1024
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 147/337 (43%), Gaps = 11/337 (3%)
Query: 27 VIRGIYKENNLKR---LVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQ 83
+I G +E+N+ R L+D+ +K + + Y + L + K ++LE
Sbjct: 409 LIEGYCREHNMGRALELLDEMEKRN----LVPSAVSYGAMINGLCHCKDLSLANKLLEKM 464
Query: 84 KQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKF 143
+ LI Y E AR++ D M + +NA++ + K
Sbjct: 465 TFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKM 524
Query: 144 DEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNT 203
+E ++ + G++PD V++ I + G + A EM G+ + +
Sbjct: 525 EEASTYLLEIQGR-GLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTV 583
Query: 204 LLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
L+ G + G +A I+ + + V P+V++ +A + GL + ++AL++ E++ K
Sbjct: 584 LINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKG 643
Query: 264 INPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAF 320
+ PDVFT+ +LI GF +G +E+A +++ G N I+ LV +C+ GD+ A
Sbjct: 644 LVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRAR 703
Query: 321 NLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
L + D ++D K V EA L
Sbjct: 704 KLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSL 740
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 130/287 (45%), Gaps = 9/287 (3%)
Query: 74 RWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNAL 133
++ +E+L+H + LI + KA A +F + V + +A
Sbjct: 564 KYFDEMLDHGL----MPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAF 619
Query: 134 LGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKG 193
+ + + + E +F +L K G+ PD+ +Y+++I F +G ++ A L EM KG
Sbjct: 620 IHGLLKNGRVQEALKVFSELKEK-GLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKG 678
Query: 194 IRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKAL 253
I ++ +N L+ G +G A K+++ M + P+ +Y+ +DG + +A
Sbjct: 679 IAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAF 738
Query: 254 ELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFV 310
L EM SK + P F + AL+ G EG++E+A + + G + F L+
Sbjct: 739 SLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLS-FNTLIDGY 797
Query: 311 CEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
C+ + A L + +++ + D V+D K ++EEA L
Sbjct: 798 CKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLL 844
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 109/229 (47%), Gaps = 4/229 (1%)
Query: 129 SFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
++ + +K+ +E F+++ K G++PD + + +I F+ +G +D +
Sbjct: 300 TYTIITAGLCRAKRMNEAKLTFEEM-QKTGLKPDYNACSALIDGFMREGDIDEVLRIKDV 358
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
M GI ++LIT+N L+ G G+ A +I + MV + +PN R++ ++G E
Sbjct: 359 MVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHN 418
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKL 305
+ALEL+ EM + + P ++ A+I G + +L A + K SG N ++ +
Sbjct: 419 MGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSI 478
Query: 306 LVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA 354
L+ +G ++ A L D ++ L+K ++EEA
Sbjct: 479 LIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEA 527
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 117/260 (45%), Gaps = 4/260 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI K E A ++ M C+ +F L+ L ++ K
Sbjct: 374 LIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEM-EKR 432
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
+ P VSY +I L AN LL +M G++ +++ ++ L++ + S GR +A
Sbjct: 433 NLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEA 492
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ + M V P++ YNA + L+ + ++A + E++ + + PD TF A I G
Sbjct: 493 RRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILG 552
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
+ G + EA +++++ G N ++ +L+ + G+L A ++ +R + L D
Sbjct: 553 YSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPD 612
Query: 335 QAPLQLVVDRLAKELRVEEA 354
+ L K RV+EA
Sbjct: 613 VQTCSAFIHGLLKNGRVQEA 632
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 114/268 (42%), Gaps = 14/268 (5%)
Query: 40 LVDKFKKSSDLGRFR------TNTGIYTGTVQRLANAKRFRWIEEILE-----HQKQYKD 88
LVD KS D+ R R G+ +V + E + E H+ K
Sbjct: 689 LVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKG 748
Query: 89 ISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVD 147
+ F L+ K E A +F EM + T LSFN L+ S K E
Sbjct: 749 VQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEAS 807
Query: 148 GLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLG 207
LF+++ K I PD V+Y T+I G ++ AN L EM+++ + +D +T+ +L+ G
Sbjct: 808 QLFQEMIAK-QIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYG 866
Query: 208 FYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPD 267
+ G+ ++ ++E MV V+P+ +Y + E +A +L E+ K +
Sbjct: 867 YNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTK 926
Query: 268 VFTFYALIKGFVNEGNLEEAKRWYNKSG 295
LI +L EA + ++ G
Sbjct: 927 GTIHDLLITALCKREDLTEASKLLDEMG 954
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 123/269 (45%), Gaps = 12/269 (4%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLG---ACVNSKKFDEV-DGLFKDL 153
LI Y + M + A VF + +++ N+LL C + F +V +G+ L
Sbjct: 164 LIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVYNGM---L 220
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
K+G D+ +Y ++ A G L A +L EM++KG+ + ++ ++ G G
Sbjct: 221 DAKMGF--DVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGD 278
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
+A ++ +M + PN +Y GL K+ +A EM+ + PD A
Sbjct: 279 IDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSA 338
Query: 274 LIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSER 330
LI GF+ EG+++E R + G +N + +L+ +C+ G ++ A + K +
Sbjct: 339 LIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLG 398
Query: 331 CLVDQAPLQLVVDRLAKELRVEEAKELVE 359
C + L+++ +E + A EL++
Sbjct: 399 CKPNSRTFCLLIEGYCREHNMGRALELLD 427
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 76/169 (44%), Gaps = 7/169 (4%)
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
V ++ +I ++ G LD A + + + I + LI N+LL G K++
Sbjct: 159 VVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVYNG 218
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
M++ + +V +Y + L + A ++ EM K +NP+ F + +I+G G+
Sbjct: 219 MLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGD 278
Query: 284 LEEA---KRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSE 329
++EA KR + G N + ++ +C ++ A K TF E
Sbjct: 279 IDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEA----KLTFEE 323
>gi|449467169|ref|XP_004151297.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Cucumis sativus]
gi|449518833|ref|XP_004166440.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Cucumis sativus]
Length = 609
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 126/268 (47%), Gaps = 3/268 (1%)
Query: 53 FRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENAR 112
R T YT V L KRF+ I +L ++ +I + ++ + A
Sbjct: 88 HRPTTVTYTALVAALTRQKRFKAISGLLSEMEETGIKPDSILLNAIINAFSESGNVKEAM 147
Query: 113 KVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKA 172
++F +M C+ T +FN L+ +K +E L + + ++P+ +YN ++ A
Sbjct: 148 EIFQKMEESGCKPTTSTFNTLIKGYGIIRKPEESMKLLELMTRTTNLKPNNRTYNILVGA 207
Query: 173 FVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPN 232
K S+ A ++++M G++ D++T+NTL + +G AE I M+N V PN
Sbjct: 208 LCKKKSIKEAWNVVHQMLASGVQPDVVTYNTLARAYAQDGETNKAESIIVDMLNKKVNPN 267
Query: 233 VRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN---LEEAKR 289
R+ + G + +AL +V MR I+P++ F +LIKGF++ G+ +++A
Sbjct: 268 ERTCGIIVGGYCEQGNLAEALRVVYRMRDLGIHPNLVIFNSLIKGFLDIGDSDGVDKALT 327
Query: 290 WYNKSGCGMNKAIFKLLVPFVCEKGDLD 317
+SG + F ++ G +D
Sbjct: 328 MMEESGVKPDVITFSTIMNGWSSAGRMD 355
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 74/131 (56%)
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
LGI P+LV +N++IK F+D G D + L ME+ G++ D+ITF+T++ G+ S GR
Sbjct: 297 LGIHPNLVIFNSLIKGFLDIGDSDGVDKALTMMEESGVKPDVITFSTIMNGWSSAGRMDK 356
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
++I++ M+ + P++ ++ G + KA L+ M + P+V F +I
Sbjct: 357 CQEIFDDMLKSGIEPDIHVFSILAKGFVRAGEPVKAESLLNFMSKYGVRPNVVIFTTIIS 416
Query: 277 GFVNEGNLEEA 287
G+ G +E+A
Sbjct: 417 GWCTAGKMEKA 427
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 90/162 (55%), Gaps = 1/162 (0%)
Query: 127 VLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLL 186
V++F+ ++ ++ + D+ +F D+ K GIEPD+ ++ + K FV G A +LL
Sbjct: 338 VITFSTIMNGWSSAGRMDKCQEIFDDM-LKSGIEPDIHVFSILAKGFVRAGEPVKAESLL 396
Query: 187 YEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIE 246
M K G+R +++ F T++ G+ + G+ A K++E M +M+V PN++++ + G
Sbjct: 397 NFMSKYGVRPNVVIFTTIISGWCTAGKMEKAWKVFEHMCDMDVSPNLKTFETLIWGYGEA 456
Query: 247 KQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
KQ +A E++ M + P+ T + + + + G + +AK
Sbjct: 457 KQPWRAEEILQMMEEMNVVPENSTLKLVSEAWRSIGMVNDAK 498
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 100/246 (40%), Gaps = 42/246 (17%)
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL 179
G N TV S L+ V K E +F L + G P V+Y ++ A +
Sbjct: 50 GNNSCGTVRSRTKLMNILVERGKPQEAQFIFNSLVEQ-GHRPTTVTYTALVAALTRQKRF 108
Query: 180 DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMV-------------- 225
+ + LL EME+ GI+ D I N ++ F +G +A +I++ M
Sbjct: 109 KAISGLLSEMEETGIKPDSILLNAIINAFSESGNVKEAMEIFQKMEESGCKPTTSTFNTL 168
Query: 226 ----------------------NMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE 263
N++PN R+YN + L +K K+A +V +M +
Sbjct: 169 IKGYGIIRKPEESMKLLELMTRTTNLKPNNRTYNILVGALCKKKSIKEAWNVVHQMLASG 228
Query: 264 INPDVFTFYALIKGFVNEGNLEEAKR----WYNKSGCGMNKAIFKLLVPFVCEKGDLDFA 319
+ PDV T+ L + + +G +A+ NK N+ ++V CE+G+L A
Sbjct: 229 VQPDVVTYNTLARAYAQDGETNKAESIIVDMLNKK-VNPNERTCGIIVGGYCEQGNLAEA 287
Query: 320 FNLCKR 325
+ R
Sbjct: 288 LRVVYR 293
>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 915
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 129/273 (47%), Gaps = 21/273 (7%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHK 156
LI Y + ++A KVF EMP + C + +++ L+ G CV ++ DE LF +
Sbjct: 259 LIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCV-ERRIDEAMDLFVKMKDD 317
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
P + +Y +IKA A L+ EME+KGI+ ++ T+ L+ S +
Sbjct: 318 -DCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEK 376
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
A ++ M+ + PNV +YNA ++G + AL++V M S+ + P+ T+ LIK
Sbjct: 377 ARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIK 436
Query: 277 GFVNEGNLEEAKRWYNKSGCGMNKAIFKLLVPFV----------CEKGDLDFAFNLCKRT 326
G+ KR +K+ +NK + + ++P V C G+ D A+ L
Sbjct: 437 GY--------CKRNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLM 488
Query: 327 FSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+ D ++D L K RVEEA +L +
Sbjct: 489 NDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFD 521
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 138/319 (43%), Gaps = 13/319 (4%)
Query: 53 FRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENAR 112
+ N YT + L + + E+L + + LI Y K M E+A
Sbjct: 354 IKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAL 413
Query: 113 KVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKA 172
V + M RN ++N L+ + L K L K + PD+V+YN++I
Sbjct: 414 DVVELMESRNLRPNTRTYNELIKGYCKRNVHKAMGVLNKMLERK--VLPDVVTYNSLIDG 471
Query: 173 FVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPN 232
G+ DSA LL M +G+ D T+ +++ + R +A +++++ +V PN
Sbjct: 472 QCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPN 531
Query: 233 VRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN 292
V Y A +DG + +A ++ +M SK P+ TF ALI G +G L+EA
Sbjct: 532 VVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEE 591
Query: 293 KSGCGMNKAIFK-------LLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRL 345
K M K + +L+ + + GD D A+ ++ S D +
Sbjct: 592 K----MVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTY 647
Query: 346 AKELRVEEAKELVELGKTN 364
+E R+++A+++V K N
Sbjct: 648 CREGRLQDAEDMVAKMKEN 666
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 107/233 (45%), Gaps = 4/233 (1%)
Query: 93 GFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKD 152
G L+ + + + ++V+ EM + ++N ++ +E + +
Sbjct: 184 GCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQ-YVS 242
Query: 153 LPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNG 212
+ + G++PD +Y ++I + + LDSA + EM KG R + + + L+ G
Sbjct: 243 MIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVER 302
Query: 213 RFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFY 272
R +A ++ M + + P VR+Y + L ++ +AL LV EM K I P++ T+
Sbjct: 303 RIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYT 362
Query: 273 ALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
LI ++ LE+A+ + G N + L+ C++G ++ A ++
Sbjct: 363 VLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDV 415
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 112/248 (45%), Gaps = 41/248 (16%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
++ F++A ++ M R ++ +++ + SK+ +E LF L K + P++
Sbjct: 474 RSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQK-DVIPNV 532
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
V Y +I + G ++ A+ +L +M K + +TFN L+ G ++G+ +A + E
Sbjct: 533 VMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEK 592
Query: 224 MVNMNVRPNV-----------------------------------RSYNARLDGLAIEKQ 248
MV ++++P V +Y + E +
Sbjct: 593 MVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGR 652
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA----KRWYNKSGCGMNKAIFK 304
+ A ++V +M+ ++PD+FT+ +LIKG+ + G A KR ++ +GC ++ F
Sbjct: 653 LQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHD-TGCEPSQHTFL 711
Query: 305 LLVPFVCE 312
L+ + E
Sbjct: 712 SLIKHLLE 719
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 82/396 (20%), Positives = 145/396 (36%), Gaps = 91/396 (22%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMP 119
YT + L +KR ++ + +Q I LI Y KA A + ++M
Sbjct: 500 YTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKML 559
Query: 120 GRNCEQTVLSFNALL-GACVNSK------------KFDEVDGLFKD--LPHKL------- 157
+NC L+FNAL+ G C + K K D + D L H+L
Sbjct: 560 SKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFD 619
Query: 158 ------------GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
G +PD +Y T I+ + +G L A ++ +M++ G+ DL T+++L+
Sbjct: 620 HAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLI 679
Query: 206 LGFYSNGR---------------------------------------------------- 213
G+ GR
Sbjct: 680 KGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMM 739
Query: 214 -FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKE-INPDVFTF 271
F ++ E MV V PN +SY + G+ + A ++ M+ KE I+P F
Sbjct: 740 EFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVF 799
Query: 272 YALIKGFVNEGNLEEAKRWYNKSGCGMNKAIF---KLLVPFVCEKGDLDFAFNLCKRTFS 328
AL+ EA + + C + K+L+ + +KG+ + ++ +
Sbjct: 800 NALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKGEKERGTSVFQNLLQ 859
Query: 329 ERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKTN 364
D+ ++++D + K+ VE EL + + N
Sbjct: 860 CGYYDDELAWKIIIDGVGKQGLVEAFYELFNVMEKN 895
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 84/196 (42%), Gaps = 3/196 (1%)
Query: 166 YNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMV 225
YNT++ + G +D + EM + + ++ T+N ++ G+ G +A + +V
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIV 245
Query: 226 NMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLE 285
+ P+ +Y + + G K A ++ EM K + + LI G E ++
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRID 305
Query: 286 EAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVV 342
EA + K C + +L+ +C A NL K + + +++
Sbjct: 306 EAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLI 365
Query: 343 DRLAKELRVEEAKELV 358
D L + ++E+A+EL+
Sbjct: 366 DSLCSQCKLEKARELL 381
>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
Length = 783
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 153/328 (46%), Gaps = 18/328 (5%)
Query: 39 RLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARL 98
R+ D+ +K + L T + G Q +++ + IEE+ K + T +
Sbjct: 339 RIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEM-----DKKGVKCNAVTYNI 393
Query: 99 IALY-GKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
I + K A D+M +++N L+GA + K + + ++ K
Sbjct: 394 ILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSK- 452
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++ D + NTI+ + LD A LL K+G LD +++ L+LG++ + + A
Sbjct: 453 GLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRA 512
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+W+ M + P+ +YN+ + GL ++ +A++ + EM + PD T+ +I G
Sbjct: 513 LNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHG 572
Query: 278 FVNEGNLEEAKRWYNKSGCGMNKAIFK-------LLVPFVCEKGDLDFAFNLCKRTFSER 330
F EGN+E+A +++N+ M + +FK +L+ +C +G L+ A L S+
Sbjct: 573 FCLEGNVEKAFQFHNE----MIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKG 628
Query: 331 CLVDQAPLQLVVDRLAKELRVEEAKELV 358
+D ++ L KE + E A +L+
Sbjct: 629 KDIDVVTYNTIISSLCKEGKFENAYDLL 656
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 126/264 (47%), Gaps = 4/264 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI Y + ++A ++M C +S+N +L A + + E L D+ K
Sbjct: 219 LIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSK- 277
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ P+ +YN ++ + G L A ++ M + + + T+N L+ GF ++G+ +A
Sbjct: 278 GLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEA 337
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+I + M MNV P+V +YN +DG + + + + L+ EM K + + T+ ++K
Sbjct: 338 FRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKW 397
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
+GN+ EA +K +G + + L+ C+ G + AF + S+ +D
Sbjct: 398 MCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKID 457
Query: 335 QAPLQLVVDRLAKELRVEEAKELV 358
L ++ L E +++EA L+
Sbjct: 458 TWTLNTILHCLCVEKKLDEAYNLL 481
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 99/195 (50%), Gaps = 6/195 (3%)
Query: 129 SFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLY 187
SFN L+ G C+ SK D +D + K + G PD VSYNTI+ A + + L A LL
Sbjct: 215 SFNILIYGYCLESKVKDALDWVNK--MSEFGCVPDTVSYNTILDALLKRRLLQEARDLLL 272
Query: 188 EMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEK 247
+M+ KG+ + T+N L+ G+ G +A K+ E M N+ P V +YN ++G +
Sbjct: 273 DMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDG 332
Query: 248 QTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW---YNKSGCGMNKAIFK 304
+ +A + EM + PDV T+ LI G + E +K G N +
Sbjct: 333 KIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYN 392
Query: 305 LLVPFVCEKGDLDFA 319
+++ ++C+KG++ A
Sbjct: 393 IILKWMCKKGNMTEA 407
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 103/194 (53%), Gaps = 3/194 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE-VDGLFKDLPHK 156
LI Y K + A ++DEM R + +++N+++G S+K D+ +D L + L +
Sbjct: 499 LILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLEN- 557
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
G+ PD +YN II F +G+++ A EM + + D+ T N LL G G
Sbjct: 558 -GLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEK 616
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
A K++ T+V+ +V +YN + L E + + A +L+ EM +K++ PD +T+ +I
Sbjct: 617 ALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIA 676
Query: 277 GFVNEGNLEEAKRW 290
+ G ++EA+ +
Sbjct: 677 ALTDAGRIKEAEEF 690
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 97/214 (45%), Gaps = 5/214 (2%)
Query: 79 ILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACV 138
IL + + SKE I Y + A ++F++M N +L+ N L+ + V
Sbjct: 128 ILHPTRDLPEPSKELLDTS-IGAYVQMDQPHLATQIFNKMKRLNYRPNLLTCNTLMNSLV 186
Query: 139 ---NSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIR 195
+S + KD KLG+ P+ S+N +I + + + A + +M + G
Sbjct: 187 RYPSSSSILLARQVLKD-SIKLGVVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCV 245
Query: 196 LDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALEL 255
D +++NT+L +A + M + + PN +YN + G K+A ++
Sbjct: 246 PDTVSYNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKV 305
Query: 256 VGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKR 289
+ M + P V+T+ L+ GF N+G ++EA R
Sbjct: 306 IEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFR 339
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 102/233 (43%), Gaps = 15/233 (6%)
Query: 132 ALLGACVNSKKFDEVDGLF----KDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLY 187
+LL + ++S + E+ L +DLP EP +T I A+V A +
Sbjct: 110 SLLISFISSDRQHELHKLILHPTRDLP-----EPSKELLDTSIGAYVQMDQPHLATQIFN 164
Query: 188 EMEKKGIRLDLITFNTL---LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLA 244
+M++ R +L+T NTL L+ + S+ A ++ + + + V PN S+N + G
Sbjct: 165 KMKRLNYRPNLLTCNTLMNSLVRYPSSSSILLARQVLKDSIKLGVVPNTNSFNILIYGYC 224
Query: 245 IEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW---YNKSGCGMNKA 301
+E + K AL+ V +M PD ++ ++ + L+EA+ G NK
Sbjct: 225 LESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKGLSPNKH 284
Query: 302 IFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA 354
+ +LV C G L A + + L ++V+ + +++EA
Sbjct: 285 TYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEA 337
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 119/298 (39%), Gaps = 31/298 (10%)
Query: 8 LSCSFSTTATATGPKFIGSVIRGIYKENNLKR---LVDKFKKSSDLGRFRTNTGIYTGTV 64
L CS S G +I G +K+ R L D+ K+ + T + G
Sbjct: 480 LLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLC 539
Query: 65 QRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCE 124
Q + + E+LE+ + E +I + E A + +EM +
Sbjct: 540 QSRKVDQAIDKLNEMLENGL----VPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFK 595
Query: 125 QTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANT 184
V + N LL ++ LF L K G + D+V+YNTII + +G ++A
Sbjct: 596 PDVYTCNILLRGLCREGMLEKALKLFNTLVSK-GKDIDVVTYNTIISSLCKEGKFENAYD 654
Query: 185 LLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNV--RPNVR-------- 234
LL EME K + D T+ ++ GR +AE+ MV + N++
Sbjct: 655 LLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESGIVHDQNLKLGKGQNVL 714
Query: 235 -------------SYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFV 279
+Y+ +++ L + + K A+ L E+ + + + +T+ L++G +
Sbjct: 715 TSEVSEHFDFKSIAYSDQINELCNQHKYKDAMHLFVEVTKEGVALNKYTYLNLMEGLI 772
>gi|51971677|dbj|BAD44503.1| hypothetical protein [Arabidopsis thaliana]
Length = 447
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 117/267 (43%), Gaps = 36/267 (13%)
Query: 102 YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL-------- 153
Y A + A K+F M C Q + SFN +L SK+ ++ LF+ L
Sbjct: 130 YASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSVDT 189
Query: 154 ----------------PHKL---------GIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
P L GI P+L +YNT++K F G + A E
Sbjct: 190 VTYNVILNGWCLIKRTPKTLEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLE 249
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
M+K+ +D++T+ T++ GF G A +++ M+ V P+V +YNA + L +
Sbjct: 250 MKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDN 309
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL---EEAKRWYNKSGCGMNKAIFKL 305
+ A+ + EM + P+V T+ LI+G + G EE + GC N + +
Sbjct: 310 VENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNM 369
Query: 306 LVPFVCEKGDLDFAFNLCKRTFSERCL 332
++ + E +++ A L ++ S CL
Sbjct: 370 MIRYYSECSEVEKALGLFEKMGSGDCL 396
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 101/224 (45%), Gaps = 12/224 (5%)
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
L I P ++ + + + G D A L M + G DL +FNT+L + R
Sbjct: 114 LRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKR--- 170
Query: 217 AEKIWETMVNMNVRPNVR--SYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYAL 274
EK +E + R +V +YN L+G + K+T K LE++ EM + INP++ T+ +
Sbjct: 171 VEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKTLEVLKEMVERGINPNLTTYNTM 230
Query: 275 IKGFVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERC 331
+KGF G + A ++ K C ++ + +V G++ A N+ E
Sbjct: 231 LKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGV 290
Query: 332 LVDQAPLQLVVDRLAKELRVEEA----KELVELGKTNSYCRYNL 371
L A ++ L K+ VE A +E+V G + YN+
Sbjct: 291 LPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNV 334
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 59/119 (49%), Gaps = 1/119 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I + K ENA +F+EM R E V ++N L+ ++ +F + L + + ++
Sbjct: 300 MIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENE- 358
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
G EP+ +YN +I+ + + ++ A L +M +L T+N L+ G + R D
Sbjct: 359 GCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSED 417
>gi|115479179|ref|NP_001063183.1| Os09g0417500 [Oryza sativa Japonica Group]
gi|50253027|dbj|BAD29277.1| putative fertility restorer homologue A [Oryza sativa Japonica
Group]
gi|113631416|dbj|BAF25097.1| Os09g0417500 [Oryza sativa Japonica Group]
Length = 618
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 109/218 (50%), Gaps = 4/218 (1%)
Query: 111 ARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTII 170
A +V+D+M R + V+++ ++ A + +GLF ++ + G+ P+L +YN ++
Sbjct: 192 AWEVWDQMVARRIDPNVVTYTTMICALCEEDCIGDAEGLFLEM-KEAGMRPNLYTYNALM 250
Query: 171 KAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR 230
+ + ++ A Y++ K G+ + + F TL+ G R +A+ I+ M V
Sbjct: 251 SSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCQANRITEAKNIFLDMPRYEVA 310
Query: 231 PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
P V YN+ + G ++AL E+ K + PD FT +++G + G ++ A R+
Sbjct: 311 PTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLCDGGQMQVATRF 370
Query: 291 ---YNKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKR 325
+SG +N A + +L+ C+ G+LD A C R
Sbjct: 371 LEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCTR 408
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 108/238 (45%), Gaps = 12/238 (5%)
Query: 86 YKDISKEGFTAR------LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
Y D+ K G LI +A A+ +F +MP TV +N+L+
Sbjct: 266 YYDLLKCGLVPNDVIFTTLIDGLCQANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFR 325
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
S E F+++ K G+ PD + + +++ D G + A L M++ GI L+
Sbjct: 326 SGYAQEALAFFQEIIRK-GLRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAA 384
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
+N L+ + +G +A M + V PNV +Y++ +DG + + + A+ + EM
Sbjct: 385 AYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEM 444
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS----GCGMNKAIFKLLVPFVCEK 313
+K + P+V T+ ALI G G++ +A W K G N +LV +C +
Sbjct: 445 VAKGVEPNVVTYTALIHGHAKNGDM-DAAFWLQKEMEEKGIYSNAITVSVLVDGLCRE 501
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 77/165 (46%), Gaps = 3/165 (1%)
Query: 161 PDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKI 220
P L + N I+ V L L EM +G+ ++T+NTL+ G A A ++
Sbjct: 136 PALPACNAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWEV 195
Query: 221 WETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVN 280
W+ MV + PNV +Y + L E A L EM+ + P+++T+ AL+
Sbjct: 196 WDQMVARRIDPNVVTYTTMICALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFK 255
Query: 281 EGNLEEAKR-WYNKSGCGM--NKAIFKLLVPFVCEKGDLDFAFNL 322
N++ A +Y+ CG+ N IF L+ +C+ + A N+
Sbjct: 256 RDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCQANRITEAKNI 300
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 115/272 (42%), Gaps = 8/272 (2%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
S+I G ++ + + F++ G R + + V+ L + + + LE +Q
Sbjct: 318 SLIHGAFRSGYAQEALAFFQEIIRKG-LRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQ 376
Query: 86 YKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
LI Y K+ + A M E V+++++L+ + + +
Sbjct: 377 SGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEI 436
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
++ ++ K G+EP++V+Y +I G +D+A L EME+KGI + IT + L+
Sbjct: 437 AMAIYTEMVAK-GVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLV 495
Query: 206 LGFYSNGRFADAEKI---WETMVNMNVRPNVR---SYNARLDGLAIEKQTKKALELVGEM 259
G R DA + + P++ +Y + GL I+ Q +A M
Sbjct: 496 DGLCRENRVQDAVRFIMEYSGQKKSEKNPSIANSVTYMTLIYGLYIDGQYNEACHFFSCM 555
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLEEAKRWY 291
R + PD FT+ +I+G G + A Y
Sbjct: 556 RDSGMVPDRFTYTLVIRGLCMLGYVLNAMMLY 587
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 87/192 (45%), Gaps = 6/192 (3%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVL-SFNALLGACVNSKKFDEVDGLFKDLPHK 156
L+ + A+ + A VF GR E L + NA+L V + V LF ++ +
Sbjct: 112 LVIALSQMALPDEALSVF----GRLRELPALPACNAILDGLVKAHMLARVWELFDEMLGR 167
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
G+ P +V+YNT+I A +G + A + +M + I +++T+ T++ D
Sbjct: 168 -GMVPSVVTYNTLINACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMICALCEEDCIGD 226
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
AE ++ M +RPN+ +YNA + K AL ++ + P+ F LI
Sbjct: 227 AEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLID 286
Query: 277 GFVNEGNLEEAK 288
G + EAK
Sbjct: 287 GLCQANRITEAK 298
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 91/195 (46%), Gaps = 10/195 (5%)
Query: 129 SFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
++N L+ S DE + ++G+EP++V+Y+++I G ++ A + E
Sbjct: 385 AYNVLIDEYCKSGNLDEALVTCTRM-SEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTE 443
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
M KG+ +++T+ L+ G NG A + + M + N + + +DGL E +
Sbjct: 444 MVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENR 503
Query: 249 TKKALELVGE---MRSKEINPDV---FTFYALIKGFVNEGNLEEAKRWYN---KSGCGMN 299
+ A+ + E + E NP + T+ LI G +G EA +++ SG +
Sbjct: 504 VQDAVRFIMEYSGQKKSEKNPSIANSVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPD 563
Query: 300 KAIFKLLVPFVCEKG 314
+ + L++ +C G
Sbjct: 564 RFTYTLVIRGLCMLG 578
>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
Length = 841
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 128/254 (50%), Gaps = 6/254 (2%)
Query: 110 NARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNT 168
+A ++ E + V ++NAL+ G C+ K D +D LF + K I PD+ +++
Sbjct: 351 DAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAID-LFNKMTSK-NIIPDVYTFSI 408
Query: 169 IIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMN 228
++ F G++ A +L M K+ I+ D++T+++L+ G+ AE I+ TM +
Sbjct: 409 LVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRG 468
Query: 229 VRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288
V NV+SYN ++G K +A++L EM K+I PDV T+ +LI G G + A
Sbjct: 469 VTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYAL 528
Query: 289 RWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRL 345
++ G + + ++ +C+K +D A L + + D ++V L
Sbjct: 529 ELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGL 588
Query: 346 AKELRVEEAKELVE 359
+ ++E+A+++ E
Sbjct: 589 CQSGKLEDARKVFE 602
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 76/139 (54%)
Query: 150 FKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFY 209
F D +G D VSY T+I G +A LL + K ++ D++ +NT++ G
Sbjct: 285 FHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMC 344
Query: 210 SNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVF 269
+ DA ++ V+ + P+V +YNA + G I + K A++L +M SK I PDV+
Sbjct: 345 KDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVY 404
Query: 270 TFYALIKGFVNEGNLEEAK 288
TF L+ GF +GN++EAK
Sbjct: 405 TFSILVDGFCKDGNIKEAK 423
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 103/206 (50%), Gaps = 7/206 (3%)
Query: 76 IEEILEHQKQYKDISKEGFTAR------LIALYGKAAMFENARKVFDEMPGRNCEQTVLS 129
+ E+ + + + +S G TA +I + K M + A K+F EM + V++
Sbjct: 451 VNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVIT 510
Query: 130 FNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEM 189
+++L+ S + L ++ H G +PD+++YN+I+ A K +D A TLL ++
Sbjct: 511 YSSLIDGLCKSGRISYALELVDEM-HYRGQQPDIITYNSILDALCKKHHVDKAITLLTKL 569
Query: 190 EKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQT 249
+ +GIR D+ T+ L+ G +G+ DA K++E ++ +V +Y + G +
Sbjct: 570 KGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLF 629
Query: 250 KKALELVGEMRSKEINPDVFTFYALI 275
+AL L+ +M PD T+ +I
Sbjct: 630 DEALALLSKMEENGCIPDAKTYEIII 655
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 82/168 (48%), Gaps = 3/168 (1%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G EPD ++ T IK F KG + A ++ G LD +++ TL+ G G A
Sbjct: 258 GYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAA 317
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ V+P+V YN +DG+ +K A +L E SK I PDVFT+ ALI G
Sbjct: 318 LELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISG 377
Query: 278 FVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
F G L++A +NK + F +LV C+ G++ A N+
Sbjct: 378 FCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNV 425
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 82/180 (45%), Gaps = 4/180 (2%)
Query: 80 LEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
+ H++ + D+ + LI K+ A ++ DEM R + ++++N++L A
Sbjct: 499 MHHKQIFPDVIT---YSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCK 555
Query: 140 SKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLI 199
D+ L L + GI PD+ +Y ++K G L+ A + ++ KG LD+
Sbjct: 556 KHHVDKAITLLTKLKGQ-GIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVY 614
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
+ ++ GF G F +A + M P+ ++Y + L + + A +L+ EM
Sbjct: 615 AYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREM 674
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 78/169 (46%), Gaps = 7/169 (4%)
Query: 60 YTGTVQRLANAKRFRWIEEI---LEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFD 116
Y+ + L + R + E+ + ++ Q DI + + L AL K + + A +
Sbjct: 511 YSSLIDGLCKSGRISYALELVDEMHYRGQQPDIIT--YNSILDALCKKHHV-DKAITLLT 567
Query: 117 EMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDK 176
++ G+ + ++ L+ S K ++ +F+DL K G D+ +Y +I+ F DK
Sbjct: 568 KLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVK-GYNLDVYAYTVMIQGFCDK 626
Query: 177 GSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMV 225
G D A LL +ME+ G D T+ ++L + AEK+ M+
Sbjct: 627 GLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMI 675
>gi|326523953|dbj|BAJ96987.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 129/296 (43%), Gaps = 7/296 (2%)
Query: 23 FIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEH 82
F+ +IR K + KK +LG TG Y + L + EE+
Sbjct: 733 FLSPIIRHFCKHKEALAAHELVKKFENLG-VSLKTGSYNALICGLVDEDLIDIAEELFSE 791
Query: 83 QKQYKDISKEGFTARLIA-LYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSK 141
K+ E FT LI GK+ E+ K+ +EM + + T +++N ++ V SK
Sbjct: 792 MKRLGCDPDE-FTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSK 850
Query: 142 KFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITF 201
DE L+ L + G P +Y ++ + G+++ A L EM + G + +
Sbjct: 851 MLDEAINLYYQLMSE-GFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIY 909
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS 261
N LL G+ G +++E+MV + P+++SY +D L + + L ++
Sbjct: 910 NILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTD 969
Query: 262 KEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKG 314
+ PD+ T+ LI G G LEEA YN K G N + L+ ++ + G
Sbjct: 970 MGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAG 1025
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 109/231 (47%), Gaps = 12/231 (5%)
Query: 86 YKDISKEGFTARLIALYG-------KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACV 138
Y + EGF+ YG K E+A +FDEM CE +N LL
Sbjct: 859 YYQLMSEGFSPTPCT-YGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYR 917
Query: 139 NSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDL 198
+ ++V LF+ + + G+ PD+ SY +I G L+ + ++ G+ DL
Sbjct: 918 IAGDTEKVCELFESMVEQ-GMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDL 976
Query: 199 ITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGE 258
IT+N L+ G +GR +A ++ M + PN+ +YN+ + L + +A ++ E
Sbjct: 977 ITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEE 1036
Query: 259 MRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLL 306
+ +K P+VFT+ ALI+G+ G+ E A Y + GC N + + L
Sbjct: 1037 LLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQL 1087
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 105/219 (47%), Gaps = 4/219 (1%)
Query: 107 MFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSY 166
+ + A ++F EM C+ +++ +L A S + +++ + +++ H G + V+Y
Sbjct: 781 LIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEM-HNKGYKSTYVTY 839
Query: 167 NTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVN 226
NTII V LD A L Y++ +G T+ LL G +G DAE +++ M+
Sbjct: 840 NTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLE 899
Query: 227 MNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEE 286
PN YN L+G I T+K EL M + +NPD+ ++ +I +G L +
Sbjct: 900 CGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLND 959
Query: 287 AKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
++ + G + + LL+ + + G L+ A +L
Sbjct: 960 GLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSL 998
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 125/296 (42%), Gaps = 35/296 (11%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARL-IALYGKAAMFENARKVFDEM 118
Y + A RF E+ H + + G+T L I +GK+ A K ++ M
Sbjct: 384 YNSLISGFLKADRFNRALELFNHMNIHGP-TPNGYTHVLFINYHGKSGESLKALKRYELM 442
Query: 119 PGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGS 178
+ V++ NA+L + + +F +L +GI PD ++Y +IK +
Sbjct: 443 KSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHEL-KAMGISPDNITYTMMIKCCSKASN 501
Query: 179 LDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNA 238
D A + EM + D++ N+L+ Y GR +A KI+ + MN+ P +YN
Sbjct: 502 ADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNT 561
Query: 239 RLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGM 298
L GL E + K+ ++L+ M S P++ T+ ++ C
Sbjct: 562 LLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLD-------------------C-- 600
Query: 299 NKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA 354
+C+ G++++A ++ C+ D + V+ L KE R++EA
Sbjct: 601 -----------LCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEGRLDEA 645
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 103/222 (46%), Gaps = 7/222 (3%)
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
LG+ SYN +I VD+ +D A L EM++ G D T++ +L + R D
Sbjct: 760 LGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIED 819
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
KI E M N + +YN + GL K +A+ L ++ S+ +P T+ L+
Sbjct: 820 MLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLD 879
Query: 277 GFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV 333
G + +GN+E+A+ ++ + GC N AI+ +L+ GD + L + +
Sbjct: 880 GLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNP 939
Query: 334 DQAPLQLVVDRLAKELRVEEA----KELVELGKTNSYCRYNL 371
D +V+D L + R+ + K+L ++G YNL
Sbjct: 940 DIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNL 981
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 138/313 (44%), Gaps = 21/313 (6%)
Query: 66 RLANAKRFRWIEEILEHQKQYKDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCE 124
RL AKR + H+ + IS + T +I KA+ + A K+F EM C
Sbjct: 466 RLGMAKR-------VFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCA 518
Query: 125 QTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANT 184
VL+ N+L+ + + +E +F +L ++ +EP +YNT++ +G +
Sbjct: 519 PDVLAMNSLIDMLYKAGRGNEAWKIFYEL-KEMNLEPTDCTYNTLLAGLGREGKVKEVMQ 577
Query: 185 LLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLA 244
LL M ++IT+NT+L NG A + +M P++ SYN + GL
Sbjct: 578 LLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLV 637
Query: 245 IEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA----KRWYNKSGCGMNK 300
E + +A + +M+ K + PD T ++ FV G ++EA + + + +++
Sbjct: 638 KEGRLDEAFWMFCQMK-KVLAPDYATVCTILPSFVRSGLMKEALHTVREYILQPDSKVDR 696
Query: 301 AIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE- 359
+ L+ + ++ + + + S L+D L ++ K A ELV+
Sbjct: 697 SSVHSLMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHFCKHKEALAAHELVKK 756
Query: 360 ---LG---KTNSY 366
LG KT SY
Sbjct: 757 FENLGVSLKTGSY 769
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 96/219 (43%), Gaps = 7/219 (3%)
Query: 81 EHQKQYKDISKEGF--TAR----LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL 134
E YK ++ +G T R L+ +GK E + EM R V S+ +
Sbjct: 189 EAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICI 248
Query: 135 GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGI 194
+ + +E + + + + G +PD+V+ +I+ D G L A + ++M+
Sbjct: 249 RVLGQAGRLEEAYRILRKMEEE-GCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQ 307
Query: 195 RLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALE 254
+ D +T+ TLL +G +IW + NV SY A +D L + +AL+
Sbjct: 308 KPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALD 367
Query: 255 LVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK 293
+ EM+ K I P +++ +LI GF+ A +N
Sbjct: 368 VFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNH 406
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 100/216 (46%), Gaps = 8/216 (3%)
Query: 125 QTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANT 184
T S N +L + +V +F DL + I+ ++ ++ T+ A +G L SA
Sbjct: 99 HTTESCNYMLELMRAHGRVGDVAQVF-DLMQRQIIKANVGTFCTVFGAVGVEGGLRSAPV 157
Query: 185 LLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLA 244
L M++ GI L+ T+N L+ +G +A +++ M V P VR+Y+ +
Sbjct: 158 ALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFG 217
Query: 245 IEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKA 301
+ + + L+GEM ++ + P+V+++ I+ G LEEA R K GC +
Sbjct: 218 KRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVV 277
Query: 302 IFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAP 337
+L+ +C+ G L A K F + DQ P
Sbjct: 278 TNTVLIQILCDAGRLADA----KDVFWKMKASDQKP 309
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 125/314 (39%), Gaps = 43/314 (13%)
Query: 99 IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLG 158
I + G+A E A ++ +M C+ V++ L+ ++ + + +F +
Sbjct: 248 IRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKAS-D 306
Query: 159 IEPDLVSYNTI-----------------------------------IKAFVDKGSLDSAN 183
+PD V+Y T+ + A G +D A
Sbjct: 307 QKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEAL 366
Query: 184 TLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
+ EM++KGI ++N+L+ GF RF A +++ M PN ++ ++
Sbjct: 367 DVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYH 426
Query: 244 AIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNK 300
++ KAL+ M+SK I PDV A++ G G L AKR +++ G +
Sbjct: 427 GKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDN 486
Query: 301 AIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEA----KE 356
+ +++ + + D A + RC D + ++D L K R EA E
Sbjct: 487 ITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYE 546
Query: 357 LVELGKTNSYCRYN 370
L E+ + C YN
Sbjct: 547 LKEMNLEPTDCTYN 560
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 87/197 (44%), Gaps = 4/197 (2%)
Query: 129 SFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
++N L+ V S E ++K + G+ P + +Y+ ++ AF + ++ LL E
Sbjct: 173 TYNGLIYFLVKSGFDREAMDVYKAMAAD-GVVPTVRTYSVLMLAFGKRRDAETVVGLLGE 231
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
ME +G+R ++ ++ + GR +A +I M +P+V + + L +
Sbjct: 232 MEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGR 291
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKL 305
A ++ +M++ + PD T+ L+ + G+ +N G N +
Sbjct: 292 LADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTA 351
Query: 306 LVPFVCEKGDLDFAFNL 322
V +C+ G +D A ++
Sbjct: 352 AVDALCQVGRVDEALDV 368
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 117/298 (39%), Gaps = 47/298 (15%)
Query: 118 MPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKG 177
M C + S+N ++ V + DE +F + L PD + TI+ +FV G
Sbjct: 617 MTMNGCMPDLSSYNTVMYGLVKEGRLDEAFWMFCQMKKVLA--PDYATVCTILPSFVRSG 674
Query: 178 SL--------------------DSANTLLYEMEKK----------------GIRLDLITF 201
+ S ++L+ + K+ G+ LD +
Sbjct: 675 LMKEALHTVREYILQPDSKVDRSSVHSLMEGILKRDGTEKSIEFAENIASSGLLLDDLFL 734
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS 261
+ ++ F + A ++ + N+ V SYNA + GL E A EL EM+
Sbjct: 735 SPIIRHFCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKR 794
Query: 262 KEINPDVFTFY----ALIKGFVNEGNLEEAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLD 317
+PD FT++ A+ K E L+ + +NK G + ++ + + LD
Sbjct: 795 LGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNK-GYKSTYVTYNTIISGLVKSKMLD 853
Query: 318 FAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAK----ELVELGKTNSYCRYNL 371
A NL + SE ++D L K+ +E+A+ E++E G + YN+
Sbjct: 854 EAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNI 911
>gi|226499896|ref|NP_001150085.1| EMB2745 [Zea mays]
gi|195636584|gb|ACG37760.1| EMB2745 [Zea mays]
gi|414879767|tpg|DAA56898.1| TPA: EMB2745 [Zea mays]
Length = 410
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 137/303 (45%), Gaps = 5/303 (1%)
Query: 61 TGTVQRLANAKRFRWIEEILEHQKQYKDISKE-GFTARLIALYGKAAMFENARKVFDEMP 119
V+RL A R +L + D + + L+ + ++ AR+VFD MP
Sbjct: 6 AAVVRRLCVAAEVRSALAVLARGTKSGDAALDVAACTALVHVCCQSGDVAEARRVFDVMP 65
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL 179
+++ AL+ + LF ++ + G+EP+L +YN +I + G
Sbjct: 66 RLGVAPNEVTYTALINGYFVRGHREMGFALFAEM-RRDGVEPNLYTYNCLIGEWCRTGEF 124
Query: 180 DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNAR 239
SA L EM KG+ +++++N L+ G + + DA +++E M +RP++ ++N
Sbjct: 125 KSARLLFDEMPVKGVVHNVVSYNILIAGLCRHSKLKDAVQLFEAMRREGIRPSIVTFNLL 184
Query: 240 LDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY---NKSGC 296
+DG + AL +M++ + P V T+ LI GF ++ A R + + G
Sbjct: 185 IDGYGKAGKMANALHFFNQMKAAGLPPSVVTYNELICGFCRVRDIARAVRAFLDMKERGL 244
Query: 297 GMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKE 356
K + +L+ ++ ++D AF + VD +++ L E ++ A++
Sbjct: 245 APTKVTYTILIAAFAKENEMDRAFMMLSEMEKAGLEVDVQSYGVLLHALCMEGKMMHARK 304
Query: 357 LVE 359
L +
Sbjct: 305 LFQ 307
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 96/191 (50%), Gaps = 1/191 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI YGKA NA F++M +V+++N L+ + F D+ +
Sbjct: 184 LIDGYGKAGKMANALHFFNQMKAAGLPPSVVTYNELICGFCRVRDIARAVRAFLDMKER- 242
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ P V+Y +I AF + +D A +L EMEK G+ +D+ ++ LL G+ A
Sbjct: 243 GLAPTKVTYTILIAAFAKENEMDRAFMMLSEMEKAGLEVDVQSYGVLLHALCMEGKMMHA 302
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
K++++M V+PN Y+ + G E + KAL L+ EMR + P+V ++ I+
Sbjct: 303 RKLFQSMDLKGVKPNSVLYDMMIYGYGREGSSYKALRLIMEMRKNGLIPNVASYCLTIRL 362
Query: 278 FVNEGNLEEAK 288
NEG +EA+
Sbjct: 363 LCNEGKCQEAE 373
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 128/281 (45%), Gaps = 12/281 (4%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHK 156
LI + + F++AR +FDEMP + V+S+N L+ G C +SK D V LF+ + +
Sbjct: 114 LIGEWCRTGEFKSARLLFDEMPVKGVVHNVVSYNILIAGLCRHSKLKDAVQ-LFEAMRRE 172
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
GI P +V++N +I + G + +A +M+ G+ ++T+N L+ GF A
Sbjct: 173 -GIRPSIVTFNLLIDGYGKAGKMANALHFFNQMKAAGLPPSVVTYNELICGFCRVRDIAR 231
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
A + + M + P +Y + A E + +A ++ EM + DV ++ L+
Sbjct: 232 AVRAFLDMKERGLAPTKVTYTILIAAFAKENEMDRAFMMLSEMEKAGLEVDVQSYGVLLH 291
Query: 277 GFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV 333
EG + A++ + G N ++ +++ +G A L +
Sbjct: 292 ALCMEGKMMHARKLFQSMDLKGVKPNSVLYDMMIYGYGREGSSYKALRLIMEMRKNGLIP 351
Query: 334 DQAPLQLVVDRLAKELRVEEAKELVE------LGKTNSYCR 368
+ A L + L E + +EA+ L++ L + + CR
Sbjct: 352 NVASYCLTIRLLCNEGKCQEAEALIDDMEHAGLQTSETICR 392
Score = 45.1 bits (105), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 69/158 (43%), Gaps = 7/158 (4%)
Query: 73 FRWIEEILEHQKQYKDISKEGFTAR------LIALYGKAAMFENARKVFDEMPGRNCEQT 126
F + +I + + D+ + G LIA + K + A + EM E
Sbjct: 223 FCRVRDIARAVRAFLDMKERGLAPTKVTYTILIAAFAKENEMDRAFMMLSEMEKAGLEVD 282
Query: 127 VLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLL 186
V S+ LL A K LF+ + K G++P+ V Y+ +I + +GS A L+
Sbjct: 283 VQSYGVLLHALCMEGKMMHARKLFQSMDLK-GVKPNSVLYDMMIYGYGREGSSYKALRLI 341
Query: 187 YEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
EM K G+ ++ ++ + + G+ +AE + + M
Sbjct: 342 MEMRKNGLIPNVASYCLTIRLLCNEGKCQEAEALIDDM 379
>gi|356577532|ref|XP_003556878.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Glycine max]
Length = 932
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 131/265 (49%), Gaps = 4/265 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI LY K A ++ M + + +++ L+ + K + +F+D K
Sbjct: 465 LINLYTKVGKVSKALEISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFT-KD 523
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G++PD+V YN II AF G++D A ++ +M+K+ R TF ++ GF G A
Sbjct: 524 GLKPDVVLYNNIITAFCGMGNMDRAICMVRQMQKERHRPTTRTFLPIIHGFARAGEMRRA 583
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+I++ M P V +YNA + GL ++Q KA+ ++ EM + P+ T+ L++G
Sbjct: 584 LEIFDMMRRSGCIPTVHTYNALILGLVEKRQMTKAVAILDEMNVAGVGPNEHTYTTLMQG 643
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
+ + G+ E+A +++ G ++ ++ L+ C+ G + A + K ++ +
Sbjct: 644 YASLGDTEKAFQYFTVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRN 703
Query: 335 QAPLQLVVDRLAKELRVEEAKELVE 359
+++D A+ V EA +L++
Sbjct: 704 TFVYNILIDGWARRGDVWEAADLMQ 728
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 92/190 (48%), Gaps = 1/190 (0%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I + +A A ++FD M C TV ++NAL+ V ++ + + ++ +
Sbjct: 570 IIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRQMTKAVAILDEM-NVA 628
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ P+ +Y T+++ + G + A + +G+ +D+ T+ LL +GR A
Sbjct: 629 GVGPNEHTYTTLMQGYASLGDTEKAFQYFTVLRNEGLEIDVYTYEALLKSCCKSGRMQSA 688
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+ + M N+ N YN +DG A +A +L+ +MR + + PD+ T+ + I
Sbjct: 689 LAVTKEMSAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKEGLLPDIHTYTSFINA 748
Query: 278 FVNEGNLEEA 287
G++++A
Sbjct: 749 CCKAGDMQKA 758
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 126/299 (42%), Gaps = 24/299 (8%)
Query: 52 RFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDI-SKEGFTARLIALYGKAAMFEN 110
R R T + + A A R EI + ++ I + + A ++ L K M +
Sbjct: 559 RHRPTTRTFLPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRQMTK- 617
Query: 111 ARKVFDEM------PGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLV 164
A + DEM P + T++ A LG K F L + G+E D+
Sbjct: 618 AVAILDEMNVAGVGPNEHTYTTLMQGYASLGD--TEKAFQYFTVLRNE-----GLEIDVY 670
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
+Y ++K+ G + SA + EM K I + +N L+ G+ G +A + + M
Sbjct: 671 TYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQM 730
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
+ P++ +Y + ++ +KA E++ EM + I P++ T+ LI G+
Sbjct: 731 RKEGLLPDIHTYTSFINACCKAGDMQKATEIIQEMEASGIKPNLKTYTTLINGWARASMP 790
Query: 285 EEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAF------NLCKRTFSERCLVD 334
E+A + + +G +KA++ LV + + ++ ++C+ +VD
Sbjct: 791 EKALSCFEEMKLAGFKPDKAVYHCLVTSLLSRATFAQSYVYSGLLSVCREMIESEMIVD 849
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 105/246 (42%), Gaps = 20/246 (8%)
Query: 96 ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPH 155
+ LI Y E A +M E T+++++ ++G D D F++
Sbjct: 323 SSLIHAYAVGRDMEEALHCVRKMKEEGIEMTIVTYSIIVGGFAKMGNADAADHWFEEAKE 382
Query: 156 KLGIEPDL--VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
KL P L V Y II A ++D A L+ EME++GI + ++T++ G+ G
Sbjct: 383 KL---PSLNAVIYGGIIYAHCQICNMDRAEALVREMEEQGIDAPIDIYHTMMDGYTMIGN 439
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
+++ + P+V SY ++ + KALE+ M+ I ++ T+
Sbjct: 440 EEKCLIVFDRLKECGFFPSVISYGCLINLYTKVGKVSKALEISKMMKMSGIKHNMKTYSM 499
Query: 274 LIKGFVNEGNLEEAKRWYN---------KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCK 324
LI GF+ + K W N K G + ++ ++ C G++D A + +
Sbjct: 500 LINGFL------KLKDWANAFSVFEDFTKDGLKPDVVLYNNIITAFCGMGNMDRAICMVR 553
Query: 325 RTFSER 330
+ ER
Sbjct: 554 QMQKER 559
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 73/159 (45%), Gaps = 3/159 (1%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G P ++SY +I + G + A + M+ GI+ ++ T++ L+ GF +A+A
Sbjct: 454 GFFPSVISYGCLINLYTKVGKVSKALEISKMMKMSGIKHNMKTYSMLINGFLKLKDWANA 513
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++E ++P+V YN + +A+ +V +M+ + P TF +I G
Sbjct: 514 FSVFEDFTKDGLKPDVVLYNNIITAFCGMGNMDRAICMVRQMQKERHRPTTRTFLPIIHG 573
Query: 278 FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEK 313
F G + A ++ +SGC + L+ + EK
Sbjct: 574 FARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEK 612
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/125 (21%), Positives = 61/125 (48%), Gaps = 4/125 (3%)
Query: 204 LLLGFYSN-GRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSK 262
L++ +Y G A + +E+M + P+ Y++ + A+ + ++AL V +M+ +
Sbjct: 289 LMVKYYGRRGDMHHARQTFESMRARGIEPSSHVYSSLIHAYAVGRDMEEALHCVRKMKEE 348
Query: 263 EINPDVFTFYALIKGFVNEGNLEEAKRWYNKSG---CGMNKAIFKLLVPFVCEKGDLDFA 319
I + T+ ++ GF GN + A W+ ++ +N I+ ++ C+ ++D A
Sbjct: 349 GIEMTIVTYSIIVGGFAKMGNADAADHWFEEAKEKLPSLNAVIYGGIIYAHCQICNMDRA 408
Query: 320 FNLCK 324
L +
Sbjct: 409 EALVR 413
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 66/134 (49%), Gaps = 10/134 (7%)
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
GIEP Y+++I A+ ++ A + +M+++GI + ++T++ ++ GF G ADA
Sbjct: 314 GIEPSSHVYSSLIHAYAVGRDMEEALHCVRKMKEEGIEMTIVTYSIIVGGFAKMGN-ADA 372
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTK-----KALELVGEMRSKEINPDVFTFY 272
W + + S NA + G I + +A LV EM + I+ + ++
Sbjct: 373 ADHWFE----EAKEKLPSLNAVIYGGIIYAHCQICNMDRAEALVREMEEQGIDAPIDIYH 428
Query: 273 ALIKGFVNEGNLEE 286
++ G+ GN E+
Sbjct: 429 TMMDGYTMIGNEEK 442
>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 721
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 149/310 (48%), Gaps = 25/310 (8%)
Query: 59 IYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEM 118
IY+ V+ L K F +E++ H ++ K + ++G +R++++ +
Sbjct: 133 IYSAVVRSLCELKDFNKAKEMI-HWMEFNQ-CKLSIVVYNVLIHGLC----KSRRIWEAL 186
Query: 119 PGRNC------EQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKA 172
+NC E V+++ KF+E + LFK++ K G+ + ++Y+ +I +
Sbjct: 187 EIKNCLMQKGLEANVVTYYG---------KFNEAELLFKEMGEK-GLCANHITYSILIDS 236
Query: 173 FVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPN 232
F +G +D+A L +M K I + +N+L+ G+ G + A+ ++ M++ + P
Sbjct: 237 FCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPT 296
Query: 233 VRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN 292
V +Y + + G E + KA ++ EM +K I+P+ +TF A+I G + EA R +
Sbjct: 297 VVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFG 356
Query: 293 ---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKEL 349
+ ++ + +++ C G++ AF+L + + D + ++ L
Sbjct: 357 EMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVG 416
Query: 350 RVEEAKELVE 359
RV EAKE V+
Sbjct: 417 RVSEAKEFVD 426
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 124/284 (43%), Gaps = 12/284 (4%)
Query: 84 KQYKDISKEG-------FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGA 136
K Y +++ +G FTA +I+ +A M A ++F EM R + +++N ++
Sbjct: 318 KVYNEMTAKGISPNTYTFTA-IISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEG 376
Query: 137 CVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRL 196
S E L ++ K G PD +Y +I G + A + ++ K +L
Sbjct: 377 HCRSGNISEAFHLLDEMVGK-GFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKL 435
Query: 197 DLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELV 256
+ + ++ L+ G+ GRF DA MV V ++ Y +DG A E T+ L+
Sbjct: 436 NNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLL 495
Query: 257 GEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEK 313
EM + + PD + +I GNL+EA ++ GC N + L+ +C+
Sbjct: 496 KEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKA 555
Query: 314 GDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKEL 357
G +D A L K T + +D L + +E+A +L
Sbjct: 556 GLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQL 599
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 86/207 (41%), Gaps = 38/207 (18%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVD---------- 147
+I + KA + A ++D M C V+++ AL+ + D+ +
Sbjct: 513 MIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSD 572
Query: 148 --------GLFKD-------------LPHKL--GIEPDLVSYNTIIKAFVDKGSLDSANT 184
G F D L H + G VSYN +I+ F G ++ A
Sbjct: 573 VTPNHITYGCFLDHLTRGGNMEKAVQLHHAMLKGFLATTVSYNILIRGFCRLGKIEEATK 632
Query: 185 LLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLA 244
LL+ M I D IT++T++ +A K+W TM++ ++P+ +Y+ + G
Sbjct: 633 LLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCC 692
Query: 245 IEKQTKKALELVGE-----MRSKEINP 266
I + +KA EL E MRS + P
Sbjct: 693 IAGELEKAFELRDEMIRRGMRSNHVTP 719
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 119/297 (40%), Gaps = 44/297 (14%)
Query: 63 TVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRN 122
+V R++ AK F + + K + ++ ++A L+ Y K F++A M R
Sbjct: 414 SVGRVSEAKEF-----VDDLHKDHHKLNNMCYSA-LVHGYCKEGRFKDAVSACRVMVERG 467
Query: 123 CEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSA 182
++ + L+ + GL K++ H G+ PD V Y +I G+L A
Sbjct: 468 VAMDLVCYAILIDGTAREHDTRALFGLLKEM-HNHGLRPDAVIYTNMIDRHSKAGNLKEA 526
Query: 183 NTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDG 242
L M +G +++T+ L+ G G AE + + + +V PN +Y LD
Sbjct: 527 FGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLDH 586
Query: 243 LA----IEK------------------------------QTKKALELVGEMRSKEINPDV 268
L +EK + ++A +L+ M +I PD
Sbjct: 587 LTRGGNMEKAVQLHHAMLKGFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDNDILPDY 646
Query: 269 FTFYALIKGFVNEGNLEEA-KRWYNKSGCGM--NKAIFKLLVPFVCEKGDLDFAFNL 322
T+ +I NL+EA K W+ G+ + + LV C G+L+ AF L
Sbjct: 647 ITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKAFEL 703
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/234 (19%), Positives = 99/234 (42%), Gaps = 30/234 (12%)
Query: 118 MPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKG 177
M N V + +ALL + ++F++V LF D+ ++PD+ Y+ ++++ +
Sbjct: 87 MKDCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIV-SANVQPDIYIYSAVVRSLCELK 145
Query: 178 SLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSN-------------------------- 211
+ A +++ ME +L ++ +N L+ G +
Sbjct: 146 DFNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYY 205
Query: 212 GRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTF 271
G+F +AE +++ M + N +Y+ +D + A+ + +M I V+ +
Sbjct: 206 GKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPY 265
Query: 272 YALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNL 322
+LI G+ GN AK ++++ G + L+ C +G+ AF +
Sbjct: 266 NSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKV 319
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 59/142 (41%), Gaps = 9/142 (6%)
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
T + LL G RF D +++ +V+ NV+P++ Y+A + L K KA E++ M
Sbjct: 98 TLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKDFNKAKEMIHWM 157
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGCGMNKAIFKLLVPFVCEKGDLDFA 319
+ + + LI G + EA N C M K + +V + + + +
Sbjct: 158 EFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKN---CLMQKGLEANVVTYYGKFNEAELL 214
Query: 320 F------NLCKRTFSERCLVDQ 335
F LC + L+D
Sbjct: 215 FKEMGEKGLCANHITYSILIDS 236
>gi|168034142|ref|XP_001769572.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679114|gb|EDQ65565.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 113/243 (46%), Gaps = 42/243 (17%)
Query: 86 YKDISKEGFTA------RLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVN 139
++++ KEG LIA+ + +++E++++VF EM R EQ + ++N L+ A
Sbjct: 293 FEEMQKEGVEPDRITFNSLIAVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNTLIDAVCK 352
Query: 140 SKK-----------------------------------FDEVDGLFKDLPHKLGIEPDLV 164
+ F+E GL+ D+ G+ PD V
Sbjct: 353 GGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKES-GVRPDRV 411
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETM 224
SYNT+I + G D A T +ME+ G++ D++T+N L+ + G++ DA +++ M
Sbjct: 412 SYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNALIDAYGKQGKYKDAAGLFDKM 471
Query: 225 VNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL 284
+ PNV +Y+A +D + + A + E + + PDV + +LI G +
Sbjct: 472 KAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEFKRAGLKPDVVLYSSLIDSCCKCGLV 531
Query: 285 EEA 287
E+A
Sbjct: 532 EDA 534
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 128/267 (47%), Gaps = 7/267 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
+I+ G+ E A VF+ V +++A++ A S + E +F+ + K
Sbjct: 205 MISTLGRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMK-KA 263
Query: 158 GIEPDLVSYNTIIKAFVDKGSLD--SANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFA 215
G +P+L++YNTII A KG +D A + EM+K+G+ D ITFN+L+ +
Sbjct: 264 GCKPNLITYNTIIDA-CGKGGVDLKKALDIFEEMQKEGVEPDRITFNSLIAVCSRGSLWE 322
Query: 216 DAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALI 275
D+++++ M + ++ +YN +D + Q + A ++ MR K I+P+V T+ +I
Sbjct: 323 DSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMI 382
Query: 276 KGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCL 332
G+ G EEA Y+ +SG ++ + L+ + G D A CK
Sbjct: 383 DGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGLK 442
Query: 333 VDQAPLQLVVDRLAKELRVEEAKELVE 359
D ++D K+ + ++A L +
Sbjct: 443 ADVVTYNALIDAYGKQGKYKDAAGLFD 469
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 122/260 (46%), Gaps = 15/260 (5%)
Query: 41 VDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIA 100
+D F ++ G F N Y+ V + R R E K ++ + K G LI
Sbjct: 219 LDVFNRAQKAG-FGNNVYAYSAMVSAYGRSGRCR------EALKVFQAMKKAGCKPNLIT 271
Query: 101 L------YGKAAM-FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
GK + + A +F+EM E ++FN+L+ C +++ +F ++
Sbjct: 272 YNTIIDACGKGGVDLKKALDIFEEMQKEGVEPDRITFNSLIAVCSRGSLWEDSQRVFAEM 331
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
+ GIE D+ +YNT+I A G ++ A +++ M K I +++T++T++ G+ G
Sbjct: 332 QRR-GIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGC 390
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
F +A ++ M VRP+ SYN +D A + AL +M + DV T+ A
Sbjct: 391 FEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNA 450
Query: 274 LIKGFVNEGNLEEAKRWYNK 293
LI + +G ++A ++K
Sbjct: 451 LIDAYGKQGKYKDAAGLFDK 470
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 103/206 (50%), Gaps = 5/206 (2%)
Query: 87 KDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDE 145
K+IS T + +I YGK FE A ++ +M +S+N L+ +FD+
Sbjct: 369 KNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDD 428
Query: 146 VDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLL 205
KD+ ++G++ D+V+YN +I A+ +G A L +M+ +G+ +++T++ L+
Sbjct: 429 ALTACKDM-ERVGLKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALI 487
Query: 206 LGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEIN 265
+ G DA I+ ++P+V Y++ +D + A+ L+ EM I
Sbjct: 488 DAYSKAGMHQDATSIFVEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQ 547
Query: 266 PDVFTFYALIKGFVNEG---NLEEAK 288
P++ T+ +LI + G N+E AK
Sbjct: 548 PNIVTYNSLIDAYGRNGQVDNVEAAK 573
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 105/214 (49%), Gaps = 14/214 (6%)
Query: 87 KDISKEGFTA------RLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNS 140
KD+ + G A LI YGK +++A +FD+M VL+++AL+ A +
Sbjct: 434 KDMERVGLKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKA 493
Query: 141 KKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLIT 200
+ +F + + G++PD+V Y+++I + G ++ A LL EM + GI+ +++T
Sbjct: 494 GMHQDATSIFVEFK-RAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVT 552
Query: 201 FNTLLLGFYSNGRFADAEKIWETM-VNMNVRPNVRSYNARLDGLAIEKQTK------KAL 253
+N+L+ + NG+ + E M +N+ + RS L ++ A+
Sbjct: 553 YNSLIDAYGRNGQVDNVEAAKGNMPINVFNKVGDRSTEIICKTLTSQQNANDHTGVLAAV 612
Query: 254 ELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
+ EM+ + P+V TF A++ +L+EA
Sbjct: 613 SVFHEMQQFGLKPNVVTFSAILNACSRCSSLQEA 646
>gi|357146713|ref|XP_003574085.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
chloroplastic-like [Brachypodium distachyon]
Length = 439
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 116/233 (49%), Gaps = 16/233 (6%)
Query: 142 KFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIR----LD 197
+ D++ FK LG+ P S+N ++ A V L +A +L EM KK + D
Sbjct: 174 RLDDLKYTFKSAESSLGVAPGRASHNVLLHALVKNSELTAARKMLNEMTKKKFKHRPPAD 233
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
+I++NT+L GF + + EK+ + + + PNV +YN R+ A + +T K EL+
Sbjct: 234 IISYNTVLAGFSAQDDGEEFEKLLKEINENKLEPNVVTYNCRIQWFAKKGETFKGEELLD 293
Query: 258 EMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS------------GCGMNKAIFKL 305
M SK++ P+ T+ AL++G+ EGN+ A R + + G ++ + +
Sbjct: 294 VMESKQVLPNYITYNALVQGYCKEGNVGAAMRVFKRMKVMKRREGRSDLGVSVHSQTYVV 353
Query: 306 LVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELV 358
L + E LD A +CK F+ + ++ +V+ L K R EAK++V
Sbjct: 354 LFRTLVENERLDDALWICKSCFAMKAAPTFEAVKGLVEGLVKGGRSTEAKDVV 406
>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 915
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 131/266 (49%), Gaps = 7/266 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHK 156
LI Y + ++A KVF+EMP + C + +++ L+ G CV +++ DE LF +
Sbjct: 259 LIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCV-ARRIDEAMDLFVKMKDD 317
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
P + +Y +IK+ A L+ EME+ GI+ ++ T+ L+ S +F
Sbjct: 318 ECF-PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEK 376
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK 276
A ++ M+ + PNV +YNA ++G + A+++V M S++++P+ T+ LIK
Sbjct: 377 ARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIK 436
Query: 277 GFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLV 333
G+ + N+ +A NK + + L+ C G+ D A+ L +
Sbjct: 437 GYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVP 495
Query: 334 DQAPLQLVVDRLAKELRVEEAKELVE 359
DQ ++D L K RVEEA +L +
Sbjct: 496 DQWTYTSMIDSLCKSKRVEEACDLFD 521
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 135/309 (43%), Gaps = 5/309 (1%)
Query: 53 FRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENAR 112
+ N YT + L + +F E+L + + LI Y K M E+A
Sbjct: 354 IKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAV 413
Query: 113 KVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKA 172
V + M R ++N L+ S + L K L K + PD+V+YN++I
Sbjct: 414 DVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERK--VLPDVVTYNSLIDG 471
Query: 173 FVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPN 232
G+ DSA LL M +G+ D T+ +++ + R +A +++++ V PN
Sbjct: 472 QCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPN 531
Query: 233 VRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN 292
V Y A +DG + +A ++ +M SK P+ TF ALI G +G L+EA
Sbjct: 532 VVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEE 591
Query: 293 KS---GCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKEL 349
K G + +L+ + + GD D A++ ++ S D + +E
Sbjct: 592 KMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREG 651
Query: 350 RVEEAKELV 358
R+ +A++++
Sbjct: 652 RLLDAEDMM 660
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 1/220 (0%)
Query: 60 YTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMP 119
YT + L +KR ++ + +Q LI Y KA + A + ++M
Sbjct: 500 YTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKML 559
Query: 120 GRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSL 179
+NC L+FNAL+ K E L ++ K+G++P + + +I + G
Sbjct: 560 SKNCLPNSLTFNALIHGLCADGKLKEAT-LLEEKMVKIGLQPTVSTDTILIHRLLKDGDF 618
Query: 180 DSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNAR 239
D A + +M G + D T+ T + + GR DAE + M V P++ +Y++
Sbjct: 619 DHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSL 678
Query: 240 LDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFV 279
+ G QT A +++ MR P TF +LIK +
Sbjct: 679 IKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLL 718
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 110/248 (44%), Gaps = 41/248 (16%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
++ F++A ++ M R ++ +++ + SK+ +E LF L K G+ P++
Sbjct: 474 RSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQK-GVNPNV 532
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
V Y +I + G +D A+ +L +M K + +TFN L+ G ++G+ +A + E
Sbjct: 533 VMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEK 592
Query: 224 MVNMNVRPNV-----------------------------------RSYNARLDGLAIEKQ 248
MV + ++P V +Y + E +
Sbjct: 593 MVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGR 652
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA----KRWYNKSGCGMNKAIFK 304
A +++ +MR ++PD+FT+ +LIKG+ + G A KR + +GC ++ F
Sbjct: 653 LLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRD-TGCEPSQHTFL 711
Query: 305 LLVPFVCE 312
L+ + E
Sbjct: 712 SLIKHLLE 719
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 80/168 (47%), Gaps = 3/168 (1%)
Query: 195 RLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALE 254
+L + +NTLL G + ++++ M+ V PN+ +YN ++G ++A +
Sbjct: 180 KLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQ 239
Query: 255 LVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLLVPFVC 311
V ++ ++PD FT+ +LI G+ +L+ A + +N+ GC N+ + L+ +C
Sbjct: 240 YVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLC 299
Query: 312 EKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
+D A +L + + C +++ L R EA LV+
Sbjct: 300 VARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVK 347
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/304 (20%), Positives = 119/304 (39%), Gaps = 26/304 (8%)
Query: 27 VIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQY 86
+I + K+ + +F++ G + + YT +Q R E+++ ++
Sbjct: 608 LIHRLLKDGDFDHAYSRFQQMLSSGT-KPDAHTYTTFIQTYCREGRLLDAEDMMAKMRE- 665
Query: 87 KDISKEGFT-ARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNAL------------ 133
+S + FT + LI YG A V M CE + +F +L
Sbjct: 666 NGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQ 725
Query: 134 ------LGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLY 187
L A N +FD V L + + + P+ SY +I + G+L A +
Sbjct: 726 KGSEPELCAMSNMMEFDTVVELLEKMVEH-SVTPNAKSYEKLILGICEVGNLRVAEKVFD 784
Query: 188 EMEK-KGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIE 246
M++ +GI + FN LL + +A K+ + M+ + P + S + GL +
Sbjct: 785 HMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKK 844
Query: 247 KQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIF 303
+ ++ + + D + +I G +G +E +N K+GC + +
Sbjct: 845 GEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTY 904
Query: 304 KLLV 307
LL+
Sbjct: 905 SLLI 908
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 81/196 (41%), Gaps = 3/196 (1%)
Query: 166 YNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMV 225
YNT++ + G +D + EM + + ++ T+N ++ G+ G +A + +V
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 226 NMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLE 285
+ P+ +Y + + G K A ++ EM K + + LI G ++
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 286 EAKRWYNK---SGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVV 342
EA + K C + +L+ +C A NL K + +++
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 343 DRLAKELRVEEAKELV 358
D L + + E+A+EL+
Sbjct: 366 DSLCSQCKFEKARELL 381
Score = 41.2 bits (95), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 71/177 (40%), Gaps = 2/177 (1%)
Query: 67 LANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMP-GRNCEQ 125
++N F + E+LE ++ +LI + A KVFD M
Sbjct: 735 MSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISP 794
Query: 126 TVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTL 185
+ L FNALL C KK +E + D+ +G P L S +I KG + ++
Sbjct: 795 SELVFNALLSCCCKLKKHNEAAKVVDDMIC-VGHLPQLESCKVLICGLYKKGEKERGTSV 853
Query: 186 LYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDG 242
+ + G D + + ++ G G +++ M + + ++Y+ ++G
Sbjct: 854 FQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
>gi|75194072|sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74900, mitochondrial; AltName: Full=Protein
ORGANELLE TRANSCRIPT PROCESSING DEFECT 43; Flags:
Precursor
gi|5882733|gb|AAD55286.1|AC008263_17 Contains a PF|01535 DUF17 domain [Arabidopsis thaliana]
gi|12323885|gb|AAG51911.1|AC013258_5 hypothetical protein; 69434-67986 [Arabidopsis thaliana]
Length = 482
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 117/267 (43%), Gaps = 36/267 (13%)
Query: 102 YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL-------- 153
Y A + A K+F M C Q + SFN +L SK+ ++ LF+ L
Sbjct: 136 YASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSVDT 195
Query: 154 ----------------PHKL---------GIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
P L GI P+L +YNT++K F G + A E
Sbjct: 196 VTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLE 255
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
M+K+ +D++T+ T++ GF G A +++ M+ V P+V +YNA + L +
Sbjct: 256 MKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDN 315
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNL---EEAKRWYNKSGCGMNKAIFKL 305
+ A+ + EM + P+V T+ LI+G + G EE + GC N + +
Sbjct: 316 VENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNM 375
Query: 306 LVPFVCEKGDLDFAFNLCKRTFSERCL 332
++ + E +++ A L ++ S CL
Sbjct: 376 MIRYYSECSEVEKALGLFEKMGSGDCL 402
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 111/234 (47%), Gaps = 9/234 (3%)
Query: 68 ANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTV 127
A R W E LE +K+ +I +T ++ +G A + AR VFDEM +V
Sbjct: 243 AGQIRHAW-EFFLEMKKRDCEIDVVTYTT-VVHGFGVAGEIKRARNVFDEMIREGVLPSV 300
Query: 128 LSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLY 187
++NA++ + +F+++ + G EP++ +YN +I+ G L+
Sbjct: 301 ATYNAMIQVLCKKDNVENAVVMFEEMVRR-GYEPNVTTYNVLIRGLFHAGEFSRGEELMQ 359
Query: 188 EMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEK 247
ME +G + T+N ++ + A ++E M + + PN+ +YN + G+ + K
Sbjct: 360 RMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRK 419
Query: 248 QTKK---ALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK---RWYNKSG 295
+++ A +L+ EM + P FTF ++ G + GN AK R +KSG
Sbjct: 420 RSEDMVVAGKLLLEMVERGFIPRKFTFNRVLNGLLLTGNQAFAKEILRLQSKSG 473
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 102/224 (45%), Gaps = 12/224 (5%)
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
L I P ++ + + + G D A L M + G DL +FNT+L + R
Sbjct: 120 LRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKR--- 176
Query: 217 AEKIWETMVNMNVRPNVR--SYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYAL 274
EK +E + R +V +YN L+G + K+T KALE++ EM + INP++ T+ +
Sbjct: 177 VEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTM 236
Query: 275 IKGFVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERC 331
+KGF G + A ++ K C ++ + +V G++ A N+ E
Sbjct: 237 LKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGV 296
Query: 332 LVDQAPLQLVVDRLAKELRVEEA----KELVELGKTNSYCRYNL 371
L A ++ L K+ VE A +E+V G + YN+
Sbjct: 297 LPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNV 340
>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 825
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 138/344 (40%), Gaps = 78/344 (22%)
Query: 105 AAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLV 164
A ++A +VF +M C V ++ LL ++ E + L ++ +K G+ P++V
Sbjct: 174 AGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNK-GVVPNVV 232
Query: 165 SYNTIIKAFVDKGSLDSANTLLYEME---------------------------------- 190
+YN +I +G D LL +ME
Sbjct: 233 TYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEA 292
Query: 191 -KKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQT 249
KG+ L+++T+N L+ G+ G A + + M V P V+++N + G +
Sbjct: 293 IGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKV 352
Query: 250 KKALELVGEMRSKEINPDVFTFYALIKG-------------------------------- 277
KA+ + +M ++P+ TF +LI G
Sbjct: 353 HKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIF 412
Query: 278 ---FVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERC 331
+EG LEEA ++ G + I+ LV C+ GD+D AF L ++ SE C
Sbjct: 413 IDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENC 472
Query: 332 LVDQAPLQLVVDRLAKELRVEEAKELVE----LGKTNSYCRYNL 371
+ D ++D L K R++ A +L++ G + C +N+
Sbjct: 473 MPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNI 516
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 99/201 (49%), Gaps = 6/201 (2%)
Query: 109 ENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
A +M G ++FN+L+ G C ++ ++ DL + G+ PD +Y
Sbjct: 353 HKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGER--KIALRLLDLMEEYGVLPDRQTYA 410
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
I A D+G L+ A++L + KGI+ + + +L+ G+ G A + E M +
Sbjct: 411 IFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASE 470
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
N P+V +YN +DGL K+ +A++L+ +M+ + I P TF LIK + + +A
Sbjct: 471 NCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADA 530
Query: 288 KRWYNK---SGCGMNKAIFKL 305
+ Y + SGC +K + L
Sbjct: 531 AKMYEQMISSGCKPDKQTYTL 551
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 89/197 (45%), Gaps = 3/197 (1%)
Query: 129 SFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
++N L+ + GLF +P + G D SY +IK G +D A + +
Sbjct: 127 TYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAK 186
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
M + R + T+ LL G R +AE + MVN V PNV +YNA + GL E +
Sbjct: 187 MSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGR 246
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS---GCGMNKAIFKL 305
+L+ +M + +PD +T+ ++ G G + + +++ G + +
Sbjct: 247 FDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNA 306
Query: 306 LVPFVCEKGDLDFAFNL 322
L+ C+ GD+ A ++
Sbjct: 307 LINGYCKGGDMKAALDV 323
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 131/279 (46%), Gaps = 24/279 (8%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
E A +F +P + + + + +L+ D GL + + + PD+ +YN
Sbjct: 422 LEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASE-NCMPDVHTYN 480
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
T+I LD A LL +M+K+GI TFN L+ + + ADA K++E M++
Sbjct: 481 TLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISS 540
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKA-LEL-VGEMRSKEINPDVFTFYALIKGFVNEGNLE 285
+P+ ++Y ++ E TK+ +++ V EM + PDV T+ A+IK +V+ G E
Sbjct: 541 GCKPDKQTYTLKISTDWFEGATKEENIDMAVVEMHEAGVFPDVETYNAIIKAYVDAGLKE 600
Query: 286 EAKRWYNKS---GCGMNKAIFKLLVPFVCEKGDLDFAF------------NLCKRTFSER 330
+A + K + + +L+ ++C K D D AF NL + F +
Sbjct: 601 KAFFAHVKMLSVPIDPDCTTYSILLNYMCNKDDSD-AFDNEKIWKMVDVRNL-QELFEQM 658
Query: 331 CLVDQAP----LQLVVDRLAKELRVEEAKELVELGKTNS 365
C D AP + ++ L + R+EE + L+ + NS
Sbjct: 659 CESDAAPGISTYKALLRGLCNQCRLEEVEWLLLKMQGNS 697
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 72/174 (41%), Gaps = 36/174 (20%)
Query: 156 KLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGF------- 208
K G P+ +YNT+I A L A L M + G+ D T+N L+LG
Sbjct: 83 KSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLGLCRAGLLA 142
Query: 209 -------------------YS----------NGRFADAEKIWETMVNMNVRPNVRSYNAR 239
YS GR DA +++ M RP V +Y
Sbjct: 143 AACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVL 202
Query: 240 LDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK 293
LDGL ++ +A L+GEM +K + P+V T+ ALI G EG ++ + K
Sbjct: 203 LDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEK 256
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 89/226 (39%), Gaps = 64/226 (28%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL---------- 153
K + A + D+M + E T +FN L+ + KK + +++ +
Sbjct: 488 KVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQ 547
Query: 154 --------------------------PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLY 187
H+ G+ PD+ +YN IIKA+VD G + A
Sbjct: 548 TYTLKISTDWFEGATKEENIDMAVVEMHEAGVFPDVETYNAIIKAYVDAGLKEKAFFAHV 607
Query: 188 EMEKKGIRLDLITFNTLLLGFYSNGRFADA---EKIWETMVNMNVRPNVRSYNARLDGLA 244
+M I D T+ ++LL + N +DA EKIW+ + +VR+
Sbjct: 608 KMLSVPIDPDCTTY-SILLNYMCNKDDSDAFDNEKIWKMV-------DVRNLQ------- 652
Query: 245 IEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRW 290
EL +M + P + T+ AL++G N+ LEE + W
Sbjct: 653 ---------ELFEQMCESDAAPGISTYKALLRGLCNQCRLEEVE-W 688
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 127/256 (49%), Gaps = 8/256 (3%)
Query: 122 NCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDS 181
N E + N ++ + +FD+VD + ++ K + PD+V++N ++ A G ++
Sbjct: 151 NSEVNTYTLNIMVHNYCKALEFDKVDAVISEM-EKRCVFPDVVTHNVMVDARFRAGDAEA 209
Query: 182 ANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLD 241
A L+ M KG++ ++T+N++L G +G + A ++++ M + V P+VRS+ +
Sbjct: 210 AMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIG 269
Query: 242 GLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGC-GM-- 298
G + ++AL++ EMR + I PD+ +F LI F G ++ A + + C G+
Sbjct: 270 GFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVP 329
Query: 299 NKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAK--- 355
+ I+ +++ C G + A + CL D +++ L KE R+ +A+
Sbjct: 330 DGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLL 389
Query: 356 -ELVELGKTNSYCRYN 370
E+ E G C +
Sbjct: 390 NEMRERGVPPDLCTFT 405
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 133/300 (44%), Gaps = 37/300 (12%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEV----------- 146
LI + + E A K++ EM R + ++SF+ L+G K D
Sbjct: 267 LIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFG 326
Query: 147 ---DGLF--------------------KDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSAN 183
DG+ +D G PD+V+YNT++ + L A
Sbjct: 327 LVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAE 386
Query: 184 TLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
LL EM ++G+ DL TF TL+ G+ G+ A ++++TM+N +RP++ +YN +DG+
Sbjct: 387 GLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGM 446
Query: 244 AIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNK 300
+ KA +L +M S+EI P+ T+ LI +G +E+A + ++ G N
Sbjct: 447 CRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNI 506
Query: 301 AIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVEL 360
+ ++ C G++ ++ + D ++ KE ++ +A +L+ +
Sbjct: 507 MTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNM 566
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 102/186 (54%), Gaps = 1/186 (0%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
+ A ++D+M R ++++ L+ + + ++ G ++ +K GI P++++YN
Sbjct: 452 LDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINK-GILPNIMTYN 510
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
+IIK + G++ L +M + DLIT+NTL+ G+ + DA K+ M
Sbjct: 511 SIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKE 570
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
V+P+V +YN ++G ++ ++A + +M +K I PD +T+ ++I G V GN +EA
Sbjct: 571 KVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEA 630
Query: 288 KRWYNK 293
+ +++
Sbjct: 631 FQLHDE 636
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 89/171 (52%), Gaps = 3/171 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHK 156
LI + + E+A DEM + ++++N+++ G C + L K + +K
Sbjct: 477 LIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNK 536
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
+ PDL++YNT+I ++ + + A LL MEK+ ++ D++T+N L+ GF +G +
Sbjct: 537 --VSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQE 594
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPD 267
A I+E M + P+ +Y + ++G +K+A +L EM + PD
Sbjct: 595 AGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 645
>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
Length = 621
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 129/296 (43%), Gaps = 39/296 (13%)
Query: 102 YGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEP 161
Y +A M +A +VF MP R C +T ++ ALL + + E +F + P
Sbjct: 117 YCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGM-RADSCAP 175
Query: 162 DLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIW 221
D Y T++ + G + A LL E G +++ +N L+ G+ + G A K++
Sbjct: 176 DTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVF 235
Query: 222 ETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNE 281
E M PNVR+Y + GL + ++A+ L M + P+V T+ ALI+G NE
Sbjct: 236 EGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNE 295
Query: 282 GNLEEAKRWYN--------------------------------------KSGCGMNKAIF 303
G+L+ A R + K G +N+ ++
Sbjct: 296 GHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVY 355
Query: 304 KLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVE 359
L+ +C+ G +D A L ++ SE + D ++D L ++ ++ +A ++E
Sbjct: 356 TSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLE 411
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 117/260 (45%), Gaps = 39/260 (15%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI Y A E+A KVF+ M G C V ++ L+ S K + LF +
Sbjct: 218 LIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEA- 276
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEME--------------------------- 190
G+EP++V+Y +I+ ++G L A LL+ ME
Sbjct: 277 GLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEA 336
Query: 191 --------KKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDG 242
KKG++++ + + +L+ G G+ A+++ + M++ P+ SY++ +DG
Sbjct: 337 QLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDG 396
Query: 243 LAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKS-GCGMNKA 301
L +K+ +A ++ +M K I T+ +I V E E K+ ++K G+N
Sbjct: 397 LCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPD 456
Query: 302 I--FKLLVPFVCEKGDLDFA 319
I + + V CE+G ++ A
Sbjct: 457 IVTYTVFVRSYCEEGRMEDA 476
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 95/231 (41%), Gaps = 8/231 (3%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
L+ + MF + + MP RN + ++ L+ A + L H
Sbjct: 47 LLMALARHRMFPDMESLASRMPARN----LRTYTTLINAYCLAGDIPAAKQHLTSLLHA- 101
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
G+ PD +Y + + + G L A + M +G T+ LL G G +A
Sbjct: 102 GLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREA 161
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ M + P+ Y + GL +T++A L+ E S P++ + ALI G
Sbjct: 162 MTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDG 221
Query: 278 FVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKR 325
+ N G +E A + + + + C N + L+ +C+ G ++ A L R
Sbjct: 222 YCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSR 272
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/252 (18%), Positives = 113/252 (44%), Gaps = 17/252 (6%)
Query: 54 RTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENARK 113
+ N +YT + L + +E+++ + + LI + A
Sbjct: 349 KVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATL 408
Query: 114 VFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAF 173
+ ++M + + + +++ ++ V + +F + GI PD+V+Y ++++
Sbjct: 409 MLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMI-ATGINPDIVTYTVFVRSY 467
Query: 174 VDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNV 233
++G ++ A +++ +M +G+ +L+T+NTL+ G+ + G + A +E MV +PN
Sbjct: 468 CEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNE 527
Query: 234 RSYNARLDGLAIEKQTKKALEL--VGEM------------RSKEINPDVFTFYALIKGFV 279
SY L + + + ++++ + +M R + D+++ + I+
Sbjct: 528 DSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCF--IRCLC 585
Query: 280 NEGNLEEAKRWY 291
LEEAK ++
Sbjct: 586 RVDRLEEAKHFF 597
>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 550
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 123/259 (47%), Gaps = 4/259 (1%)
Query: 104 KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDL 163
K + AR ++ ++ GR + V ++ L+ ++ EV L D+ + + ++
Sbjct: 230 KDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDR-NVNLNV 288
Query: 164 VSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWET 223
+YN +I A KG L A+ + M ++G R DL+TFNTL+ G+ +A K+++T
Sbjct: 289 YTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDT 348
Query: 224 MVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGN 283
+ P+V SYN + G + +AL L +M K++ P++ T+ +LI G G
Sbjct: 349 FAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGR 408
Query: 284 LEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQL 340
+ A + + G N + +++ +C+ +D A L F + + +
Sbjct: 409 ISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNI 468
Query: 341 VVDRLAKELRVEEAKELVE 359
+++ K R++EA L E
Sbjct: 469 LINGYCKSKRIDEAMNLFE 487
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 127/308 (41%), Gaps = 51/308 (16%)
Query: 54 RTNTGIYTGTVQRLANA-KRFRWIEEILEHQKQYKDISKEGFTARLIALYGKAAMFENAR 112
R +Y T RL A +F ++ K GF A ++A
Sbjct: 15 RKAAMLYAATTTRLRYAISKFSVFLRFFSDSQKQNAKKKSGFDA-----------IDDAV 63
Query: 113 KVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKA 172
+F + + +V+ FN +LG+ V K + L K + + GI P +V+ + +I
Sbjct: 64 ALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLR-GITPSIVTLSILINC 122
Query: 173 FVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNG------RFADA--------- 217
+ G + A ++L + K+G +L+ IT T++ G NG F D+
Sbjct: 123 YCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQGFLLD 182
Query: 218 EKIWETMVN--------------------MNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
E + T++N VRPNV YN +DGL + +A +L
Sbjct: 183 EVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYS 242
Query: 258 EMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYN---KSGCGMNKAIFKLLVPFVCEKG 314
++ + I+PDVFT+ LI GF G E R +N + +L+ +C+KG
Sbjct: 243 DVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKG 302
Query: 315 DLDFAFNL 322
L A ++
Sbjct: 303 MLGKAHDM 310
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 114/253 (45%), Gaps = 4/253 (1%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
LI K M A + + M R +++FN L+ E LF D +
Sbjct: 294 LIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLF-DTFAEC 352
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADA 217
GI PD+ SYN +I + +D A +L +M K + +++T+++L+ G +GR + A
Sbjct: 353 GITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYA 412
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
+++ + + PNV +YN LD L + KA+EL M + + P+V ++ LI G
Sbjct: 413 WELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILING 472
Query: 278 FVNEGNLEEAKRWY---NKSGCGMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVD 334
+ ++EA + ++ + + L+ +C+ G + A+ L VD
Sbjct: 473 YCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVD 532
Query: 335 QAPLQLVVDRLAK 347
++ D +K
Sbjct: 533 VITYNILFDAFSK 545
>gi|298712182|emb|CBJ33054.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 903
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 91/179 (50%), Gaps = 1/179 (0%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
+ A + +MP R + V+S+N ++ AC + D+ L +++P + G+ PD++++N
Sbjct: 473 WGRALSLLRDMPKRGVKPVVISYNTVISACGKCGEGDQALALLREMPER-GLMPDVITFN 531
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
+ I A + G D A L+ EM + G+ D IT+++ L G GR+ A + M
Sbjct: 532 SAIAALSNSGRPDDAVRLMREMPRAGVAADAITYSSALTGLAHAGRWEQALSLLREMQGA 591
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEE 286
V P V Y A + + +AL L+ EM + + P++F++ A I +G E+
Sbjct: 592 GVSPTVICYTAAIRACGEAGKGDEALLLLREMPTAGVTPNLFSYSATISACGKDGRWEQ 650
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 88/159 (55%), Gaps = 1/159 (0%)
Query: 129 SFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
S+N L AC +++ L +D+P K G++P ++SYNT+I A G D A LL E
Sbjct: 459 SYNTALSACEVGEQWGRALSLLRDMP-KRGVKPVVISYNTVISACGKCGEGDQALALLRE 517
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
M ++G+ D+ITFN+ + ++GR DA ++ M V + +Y++ L GLA +
Sbjct: 518 MPERGLMPDVITFNSAIAALSNSGRPDDAVRLMREMPRAGVAADAITYSSALTGLAHAGR 577
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
++AL L+ EM+ ++P V + A I+ G +EA
Sbjct: 578 WEQALSLLREMQGAGVSPTVICYTAAIRACGEAGKGDEA 616
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 8/204 (3%)
Query: 87 KDISKEGFTARLI----ALYG--KAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNS 140
+++ + G A I AL G A +E A + EM G TV+ + A + AC +
Sbjct: 551 REMPRAGVAADAITYSSALTGLAHAGRWEQALSLLREMQGAGVSPTVICYTAAIRACGEA 610
Query: 141 KKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLIT 200
K DE L +++P G+ P+L SY+ I A G + LL EM G+ +
Sbjct: 611 GKGDEALLLLREMPTA-GVTPNLFSYSATISACGKDGRWEQGLALLNEMPALGLTPNEFC 669
Query: 201 FNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMR 260
+ + G G++ A + +M+ ++P V Y + + LA + ALEL+ EM+
Sbjct: 670 YTAAITGCGIGGQWERAVATFRSMIASGIQPTVVGYTSAVSALAHCGEVDLALELLSEMK 729
Query: 261 SKE-INPDVFTFYALIKGFVNEGN 283
+ I P+ T+ A+I N G
Sbjct: 730 EEAGIEPNEQTYAAVILACGNGGQ 753
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 118/273 (43%), Gaps = 15/273 (5%)
Query: 28 IRGIYKENNLKRLVDKFKKSSDLGRFRTN----------TGIYTGTVQRLANAKRFRWIE 77
I + K++ + LV+ K GR TN T +Y+ + R+A K FRW E
Sbjct: 85 IDAVRKDDWRRILVELDKAELAEGRATTNNAKAPAAAVSTFVYSKCISRMA--KCFRWGE 142
Query: 78 --EILEHQKQYKDISKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLG 135
+IL + + + GKA + A + + E V+S+N +
Sbjct: 143 ALDILARMAELGAMPNSYCVNAALDACGKAGRVQEALGLMRDARASGIELDVVSYNCAIP 202
Query: 136 ACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIR 195
ACV ++ + +++ + GI+P+ ++Y IK G D A +LL EM+ G+
Sbjct: 203 ACVTGGDWELALSMIREMEAEYGIKPNHITYQAAIKVCGRCGKADEAASLLIEMKDGGVP 262
Query: 196 LDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALEL 255
L ++ + F + A + + V+PNV +YN + + ++AL+L
Sbjct: 263 LKTSVYSAVFNAFRRVDHWQAAASTLREIHDWPVKPNVFNYNLAICTCTDCGEWEEALDL 322
Query: 256 VGEMRS-KEINPDVFTFYALIKGFVNEGNLEEA 287
+ MR + PDV T+ ++ G E+A
Sbjct: 323 LHFMREVGGVEPDVVTYNIVVAACGKAGQGEKA 355
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 90/208 (43%), Gaps = 17/208 (8%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKL 157
++A GKA E A ++F EM + V+SF + AC + +E +F+++ +
Sbjct: 342 VVAACGKAGQGEKAIEIFREMSEVGIKPDVISFTTAISACGSCGLSEEALSIFREM-ERA 400
Query: 158 GIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIR----------------LDLITF 201
G+ P+++++N ++ A + G + A E+ D ++
Sbjct: 401 GVRPNIITHNAVMSACIAAGQWEEALDFFTEVVDGSGAANGGGGGGPPPDPVEVADACSY 460
Query: 202 NTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRS 261
NT L ++ A + M V+P V SYN + + +AL L+ EM
Sbjct: 461 NTALSACEVGEQWGRALSLLRDMPKRGVKPVVISYNTVISACGKCGEGDQALALLREMPE 520
Query: 262 KEINPDVFTFYALIKGFVNEGNLEEAKR 289
+ + PDV TF + I N G ++A R
Sbjct: 521 RGLMPDVITFNSAIAALSNSGRPDDAVR 548
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 68/133 (51%)
Query: 127 VLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLL 186
V ++N + C + +++E L + G+EPD+V+YN ++ A G + A +
Sbjct: 300 VFNYNLAICTCTDCGEWEEALDLLHFMREVGGVEPDVVTYNIVVAACGKAGQGEKAIEIF 359
Query: 187 YEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIE 246
EM + GI+ D+I+F T + S G +A I+ M VRPN+ ++NA +
Sbjct: 360 REMSEVGIKPDVISFTTAISACGSCGLSEEALSIFREMERAGVRPNIITHNAVMSACIAA 419
Query: 247 KQTKKALELVGEM 259
Q ++AL+ E+
Sbjct: 420 GQWEEALDFFTEV 432
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 90/178 (50%), Gaps = 19/178 (10%)
Query: 124 EQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSAN 183
E V+++N ++ AC + + ++ +F+++ ++GI+PD++S+ T I A G + A
Sbjct: 333 EPDVVTYNIVVAACGKAGQGEKAIEIFREM-SEVGIKPDVISFTTAISACGSCGLSEEAL 391
Query: 184 TLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVR------------- 230
++ EME+ G+R ++IT N ++ + G++ +A + +V+ +
Sbjct: 392 SIFREMERAGVRPNIITHNAVMSACIAAGQWEEALDFFTEVVDGSGAANGGGGGGPPPDP 451
Query: 231 ---PNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIK--GFVNEGN 283
+ SYN L + +Q +AL L+ +M + + P V ++ +I G EG+
Sbjct: 452 VEVADACSYNTALSACEVGEQWGRALSLLRDMPKRGVKPVVISYNTVISACGKCGEGD 509
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 80/190 (42%), Gaps = 2/190 (1%)
Query: 99 IALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLG 158
I+ GK +E + +EMP + A + C +++ F+ + G
Sbjct: 639 ISACGKDGRWEQGLALLNEMPALGLTPNEFCYTAAITGCGIGGQWERAVATFRSMIAS-G 697
Query: 159 IEPDLVSYNTIIKAFVDKGSLDSANTLLYEM-EKKGIRLDLITFNTLLLGFYSNGRFADA 217
I+P +V Y + + A G +D A LL EM E+ GI + T+ ++L + G+
Sbjct: 698 IQPTVVGYTSAVSALAHCGEVDLALELLSEMKEEAGIEPNEQTYAAVILACGNGGQGHLV 757
Query: 218 EKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKG 277
++ M + + P + Y + + +A L+GEM + + P V + A I
Sbjct: 758 AQVQRDMASAGITPRLTGYLSAIRASGECGNWSEATSLLGEMEAAGVPPTVSCYNAAITA 817
Query: 278 FVNEGNLEEA 287
G +EA
Sbjct: 818 CGKSGKWQEA 827
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 66/134 (49%), Gaps = 1/134 (0%)
Query: 155 HKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEM-EKKGIRLDLITFNTLLLGFYSNGR 213
H ++P++ +YN I D G + A LL+ M E G+ D++T+N ++ G+
Sbjct: 292 HDWPVKPNVFNYNLAICTCTDCGEWEEALDLLHFMREVGGVEPDVVTYNIVVAACGKAGQ 351
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
A +I+ M + ++P+V S+ + +++AL + EM + P++ T A
Sbjct: 352 GEKAIEIFREMSEVGIKPDVISFTTAISACGSCGLSEEALSIFREMERAGVRPNIITHNA 411
Query: 274 LIKGFVNEGNLEEA 287
++ + G EEA
Sbjct: 412 VMSACIAAGQWEEA 425
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 77/189 (40%), Gaps = 1/189 (0%)
Query: 94 FTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDL 153
+TA + G +E A F M + TV+ + + + A + + D L ++
Sbjct: 670 YTAAITGC-GIGGQWERAVATFRSMIASGIQPTVVGYTSAVSALAHCGEVDLALELLSEM 728
Query: 154 PHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGR 213
+ GIEP+ +Y +I A + G + +M GI L + + + G
Sbjct: 729 KEEAGIEPNEQTYAAVILACGNGGQGHLVAQVQRDMASAGITPRLTGYLSAIRASGECGN 788
Query: 214 FADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYA 273
+++A + M V P V YNA + + ++AL+L+ EM K + D T A
Sbjct: 789 WSEATSLLGEMEAAGVPPTVSCYNAAITACGKSGKWQEALDLLDEMPGKGLVRDSGTLSA 848
Query: 274 LIKGFVNEG 282
I G
Sbjct: 849 AISACQKAG 857
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 71/203 (34%), Gaps = 3/203 (1%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
+ I G +R V F+ G T G YT V LA+ E+L K+
Sbjct: 672 AAITGCGIGGQWERAVATFRSMIASGIQPTVVG-YTSAVSALAHCGEVDLALELLSEMKE 730
Query: 86 YKDI-SKEGFTARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
I E A +I G +V +M + + + + A +
Sbjct: 731 EAGIEPNEQTYAAVILACGNGGQGHLVAQVQRDMASAGITPRLTGYLSAIRASGECGNWS 790
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
E L ++ G+ P + YN I A G A LL EM KG+ D T +
Sbjct: 791 EATSLLGEM-EAAGVPPTVSCYNAAITACGKSGKWQEALDLLDEMPGKGLVRDSGTLSAA 849
Query: 205 LLGFYSNGRFADAEKIWETMVNM 227
+ GR A + E M+ M
Sbjct: 850 ISACQKAGRGVKAAGLVEEMLEM 872
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 127/256 (49%), Gaps = 8/256 (3%)
Query: 122 NCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDS 181
N E + N ++ + +FD+VD + ++ K + PD+V++N ++ A G ++
Sbjct: 90 NSEVNTYTLNIMVHNYCKALEFDKVDAVISEM-EKRCVFPDVVTHNVMVDARFRAGDAEA 148
Query: 182 ANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLD 241
A L+ M KG++ ++T+N++L G +G + A ++++ M + V P+VRS+ +
Sbjct: 149 AMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIG 208
Query: 242 GLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNKSGC-GM-- 298
G + ++AL++ EMR + I PD+ +F LI F G ++ A + + C G+
Sbjct: 209 GFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVP 268
Query: 299 NKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAK--- 355
+ I+ +++ C G + A + CL D +++ L KE R+ +A+
Sbjct: 269 DGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLL 328
Query: 356 -ELVELGKTNSYCRYN 370
E+ E G C +
Sbjct: 329 NEMRERGVPPDLCTFT 344
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 133/300 (44%), Gaps = 37/300 (12%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEV----------- 146
LI + + E A K++ EM R + ++SF+ L+G K D
Sbjct: 206 LIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFG 265
Query: 147 ---DGLF--------------------KDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSAN 183
DG+ +D G PD+V+YNT++ + L A
Sbjct: 266 LVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAE 325
Query: 184 TLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGL 243
LL EM ++G+ DL TF TL+ G+ G+ A ++++TM+N +RP++ +YN +DG+
Sbjct: 326 GLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGM 385
Query: 244 AIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNK 300
+ KA +L +M S+EI P+ T+ LI +G +E+A + ++ G N
Sbjct: 386 CRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNI 445
Query: 301 AIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVEL 360
+ ++ C G++ ++ + D ++ KE ++ +A +L+ +
Sbjct: 446 MTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNM 505
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 102/186 (54%), Gaps = 1/186 (0%)
Query: 108 FENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYN 167
+ A ++D+M R ++++ L+ + + ++ G ++ +K GI P++++YN
Sbjct: 391 LDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINK-GILPNIMTYN 449
Query: 168 TIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNM 227
+IIK + G++ L +M + DLIT+NTL+ G+ + DA K+ M
Sbjct: 450 SIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKE 509
Query: 228 NVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEA 287
V+P+V +YN ++G ++ ++A + +M +K I PD +T+ ++I G V GN +EA
Sbjct: 510 KVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEA 569
Query: 288 KRWYNK 293
+ +++
Sbjct: 570 FQLHDE 575
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 89/169 (52%), Gaps = 5/169 (2%)
Query: 98 LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALL-GACVNSKKFDEVDGLFKDLPHK 156
LI + + E+A DEM + ++++N+++ G C + L K + +K
Sbjct: 416 LIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNK 475
Query: 157 LGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFAD 216
+ PDL++YNT+I ++ + + A LL MEK+ ++ D++T+N L+ GF +G +
Sbjct: 476 --VSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQE 533
Query: 217 AEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM--RSKE 263
A I+E M + P+ +Y + ++G +K+A +L EM R KE
Sbjct: 534 AGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGKE 582
>gi|356558657|ref|XP_003547620.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g55840-like [Glycine max]
Length = 1078
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 110/219 (50%), Gaps = 4/219 (1%)
Query: 107 MFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSY 166
M +A + F M R +V + N +LG+ V +K D FK + K GI PD+ ++
Sbjct: 120 MVGDAVQTFYLMGFRGLNPSVYTCNMVLGSLVKEQKVDMFWSFFKGMLAK-GICPDVATF 178
Query: 167 NTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVN 226
N ++ A ++G +A LL +ME+ G+ +T+NTLL + GR+ A ++ + M +
Sbjct: 179 NILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRYKAASQLIDCMAS 238
Query: 227 MNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEE 286
+ +V +YN +D L + ++ K L+ MR + P+ T+ LI GFV EG +E
Sbjct: 239 KGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTLISGFVREGKIEV 298
Query: 287 AKRWYNKSGCG---MNKAIFKLLVPFVCEKGDLDFAFNL 322
A + +++ N + L+ C G++ A L
Sbjct: 299 ATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRL 337
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 108/232 (46%), Gaps = 6/232 (2%)
Query: 128 LSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLY 187
+++N L+ V K + +F ++ + P+ ++YNT+I G++ A L+
Sbjct: 281 ITYNTLISGFVREGKIEVATKVFDEMS-LFNLLPNSITYNTLIAGHCTTGNIGEALRLMD 339
Query: 188 EMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEK 247
M G+R + +T+ LL G Y N F I E M VR + SY A +DGL
Sbjct: 340 VMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNG 399
Query: 248 QTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK----RWYNKSGCGMNKAIF 303
++A++L+ +M +NPDV TF LI GF G + AK + Y K+G N ++
Sbjct: 400 MLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMY-KTGLVPNGILY 458
Query: 304 KLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAK 355
L+ C+ G L A N + D ++V + ++EEA+
Sbjct: 459 STLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAE 510
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 127/306 (41%), Gaps = 6/306 (1%)
Query: 53 FRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQYK-DISKEGFTARLIALYGKAAMFENA 111
R N Y + L F + ILE + +S +TA + L K M E A
Sbjct: 346 LRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGL-CKNGMLEEA 404
Query: 112 RKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIK 171
++ D+M + V++F+ L+ K + + + +K G+ P+ + Y+T+I
Sbjct: 405 VQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKM-YKTGLVPNGILYSTLIY 463
Query: 172 AFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRP 231
+ G L A M G D T N L+ F G+ +AE M M + P
Sbjct: 464 NYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDP 523
Query: 232 NVRSYNARLDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY 291
N +++ ++G KA + +M S P +FT+ L+KG G++ EA +++
Sbjct: 524 NSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFF 583
Query: 292 NKSGC---GMNKAIFKLLVPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKE 348
++ C ++ IF + C G+L A L + L D ++ L K+
Sbjct: 584 HRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKK 643
Query: 349 LRVEEA 354
++ A
Sbjct: 644 GKIVAA 649
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 104/265 (39%), Gaps = 3/265 (1%)
Query: 26 SVIRGIYKENNLKRLVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEHQKQ 85
++I G+ K+ + + K+ + G N +YT V L R I E
Sbjct: 635 NLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLN 694
Query: 86 YKDISKEGFTARLIA-LYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFD 144
KD+ + +I Y + + M +N + ++N LL
Sbjct: 695 -KDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKRHAMA 753
Query: 145 EVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTL 204
L+KD+ + G PD S++++I + S D A +L + +G +D TFN L
Sbjct: 754 RCFMLYKDMI-RHGFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNML 812
Query: 205 LLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
+ F A ++ + M V PNV +YNA +GL KA ++ +
Sbjct: 813 ITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGS 872
Query: 265 NPDVFTFYALIKGFVNEGNLEEAKR 289
P + LI G GN++ A +
Sbjct: 873 VPTNKQYITLINGMCRVGNIKGAMK 897
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 1/163 (0%)
Query: 129 SFNALLGACVNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYE 188
++NAL + + F + + + L G P Y T+I G++ A L E
Sbjct: 843 TYNALFNGLIRTSDFHKAHRVLQVLLES-GSVPTNKQYITLINGMCRVGNIKGAMKLQDE 901
Query: 189 MEKKGIRLDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQ 248
M+ GI + + ++ G ++ + +A + + M+ M + P V ++ + E
Sbjct: 902 MKTLGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEAN 961
Query: 249 TKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWY 291
KALEL M + DV + LI G G++E A + Y
Sbjct: 962 VAKALELRSIMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLY 1004
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 101/230 (43%), Gaps = 15/230 (6%)
Query: 40 LVDKFKKSSDLGRFRTNTGIYTGTVQRLANAKRFRWIEEILEH-----QKQYKDISKEGF 94
LV + + + T ++ G ++ K R ++ +LE KQY
Sbjct: 828 LVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQY-------- 879
Query: 95 TARLIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLP 154
LI + + A K+ DEM ++ +A++ NSKK + + DL
Sbjct: 880 -ITLINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSKKIENAIWVL-DLM 937
Query: 155 HKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLDLITFNTLLLGFYSNGRF 214
++ I P + ++ T++ + + ++ A L ME ++LD++ +N L+ G +NG
Sbjct: 938 LEMQIIPTVATFTTLMHVYCKEANVAKALELRSIMEHCHVKLDVVAYNVLISGLCANGDI 997
Query: 215 ADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEMRSKEI 264
A K++E M ++ PN Y +D ++ +L+ +++ +E+
Sbjct: 998 EAAFKLYEEMKQRDLWPNTSIYIVLIDSFCAGNYQIESEKLLRDIQDREL 1047
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 88/213 (41%), Gaps = 11/213 (5%)
Query: 79 ILEHQKQYKDISKEGFTAR-LIALYGKAAMFENARKVFDEMPGRNCEQTVLSFNALLGAC 137
++ H D FT L+A + + E A + M + ++F+ ++
Sbjct: 480 VMNHSGHVAD----HFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGY 535
Query: 138 VNSKKFDEVDGLFKDLPHKLGIEPDLVSYNTIIKAFVDKGSLDSANTLLYEMEKKGIRLD 197
NS + +F D + G P L +Y ++K G ++ A + + +D
Sbjct: 536 GNSGDALKAFSVF-DKMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFFHRLRCIPNAVD 594
Query: 198 LITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVG 257
+ FNT L +G +DA + MV + P+ +Y + GL + + AL L G
Sbjct: 595 NVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSG 654
Query: 258 EMRSKEI---NPDVFTFYALIKGFVNEGNLEEA 287
+ K + NP V+T +L+ G + G+ A
Sbjct: 655 KAIEKGLLSPNPAVYT--SLVDGLLKHGHARAA 685
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 72/180 (40%), Gaps = 9/180 (5%)
Query: 200 TFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNARLDGLAIEKQTKKALELVGEM 259
F+ L+ N DA + + M + P+V + N L L E++ M
Sbjct: 107 VFDLLIRVCLRNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGSLVKEQKVDMFWSFFKGM 166
Query: 260 RSKEINPDVFTFYALIKGFVNEGNLEEAK---RWYNKSGCGMNKAIFKLLVPFVCEKGDL 316
+K I PDV TF L+ G + A R +SG + L+ + C+KG
Sbjct: 167 LAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRY 226
Query: 317 DFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKTNSYCRYNLKFPSE 376
A L S+ VD + +D L ++ R AK + L + R N+ +P+E
Sbjct: 227 KAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSR--SAKGYLLLKRM----RRNMVYPNE 280
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.137 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,654,592,472
Number of Sequences: 23463169
Number of extensions: 232560618
Number of successful extensions: 716201
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6246
Number of HSP's successfully gapped in prelim test: 5592
Number of HSP's that attempted gapping in prelim test: 596975
Number of HSP's gapped (non-prelim): 59923
length of query: 377
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 233
effective length of database: 8,980,499,031
effective search space: 2092456274223
effective search space used: 2092456274223
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 78 (34.7 bits)