BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042156
(336 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8LDR0|DOF54_ARATH Dof zinc finger protein DOF5.4 OS=Arabidopsis thaliana GN=DOF5.4
PE=2 SV=2
Length = 307
Score = 125 bits (315), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 56/83 (67%), Positives = 62/83 (74%), Gaps = 5/83 (6%)
Query: 17 DRRLKTMQGGTENQQQQEQPQPQKCPRCESLNTKFCYYNNYSLSQPRYFCKTCRRYWTQG 76
DRR++ Q N Q KCPRC SLNTKFCYYNNY+LSQPR+FCK CRRYWT+G
Sbjct: 34 DRRMRAHQNNILNHHQ-----SLKCPRCNSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKG 88
Query: 77 GTLRNVPVGGGCRKGKRTKTSSV 99
G LRNVPVGGGCRK KR+KT V
Sbjct: 89 GVLRNVPVGGGCRKAKRSKTKQV 111
>sp|O24463|PBF_MAIZE Dof zinc finger protein PBF OS=Zea mays GN=PBF PE=1 SV=1
Length = 328
Score = 124 bits (310), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/113 (50%), Positives = 73/113 (64%)
Query: 15 QQDRRLKTMQGGTENQQQQEQPQPQKCPRCESLNTKFCYYNNYSLSQPRYFCKTCRRYWT 74
+Q R + + G E + + + P+ KCPRC+S NTKFCYYNNYS+SQPRYFCK CRRYWT
Sbjct: 36 KQTRAMPQIGGSGERKPRPQLPEALKCPRCDSNNTKFCYYNNYSMSQPRYFCKACRRYWT 95
Query: 75 QGGTLRNVPVGGGCRKGKRTKTSSVSGEASRASQPPQPPSPPHPNLTTTQQNI 127
GGTLRNVP+GGGCRK K + S +S P P N +++ +I
Sbjct: 96 HGGTLRNVPIGGGCRKNKHASRFVLGSHTSSSSSATYAPLSPSTNASSSNMSI 148
>sp|Q84TE9|DOF53_ARATH Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana GN=DOF5.3
PE=2 SV=1
Length = 257
Score = 121 bits (303), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 78/122 (63%), Gaps = 8/122 (6%)
Query: 35 QPQP----QKCPRCESLNTKFCYYNNYSLSQPRYFCKTCRRYWTQGGTLRNVPVGGGCRK 90
+PQP +CPRC+S NTKFCYYNNYSL+QPRYFCK+CRRYWT+GGTLRN+PVGGGCRK
Sbjct: 47 RPQPPELALRCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNIPVGGGCRK 106
Query: 91 GKRTKTSSVSGEASRASQPPQPPSPPHPNLTTTQQNILSSSNPVITTGPPVLRTKLEPAA 150
KR+ +S+ A P+P S + N S++ + + L K P +
Sbjct: 107 NKRSTSSA----ARSLRTTPEPASHDGKVFSAAGFNGYSNNEHIDLSLAFALLNKQHPGS 162
Query: 151 AS 152
+S
Sbjct: 163 SS 164
>sp|Q8LE43|DOF21_ARATH Dof zinc finger protein DOF2.1 OS=Arabidopsis thaliana GN=DOF2.1
PE=2 SV=2
Length = 288
Score = 120 bits (302), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 50/63 (79%), Positives = 57/63 (90%)
Query: 37 QPQKCPRCESLNTKFCYYNNYSLSQPRYFCKTCRRYWTQGGTLRNVPVGGGCRKGKRTKT 96
+ Q CPRCES NTKFCYYNNYSLSQPRYFCK+CRRYWT+GGTLRNVPVGGGCR+ KR+ +
Sbjct: 46 EAQNCPRCESPNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRRNKRSSS 105
Query: 97 SSV 99
S+
Sbjct: 106 SAF 108
>sp|O80928|DOF24_ARATH Dof zinc finger protein DOF2.4 OS=Arabidopsis thaliana GN=DOF2.4
PE=2 SV=1
Length = 330
Score = 118 bits (296), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 47/56 (83%), Positives = 53/56 (94%)
Query: 40 KCPRCESLNTKFCYYNNYSLSQPRYFCKTCRRYWTQGGTLRNVPVGGGCRKGKRTK 95
KCPRCES NTKFCY+NNYSL+QPR+FCKTCRRYWT+GG LRNVPVGGGCR+ +RTK
Sbjct: 90 KCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNRRTK 145
>sp|Q9FM03|DOF56_ARATH Dof zinc finger protein DOF5.6 OS=Arabidopsis thaliana GN=DOF5.6
PE=2 SV=2
Length = 372
Score = 118 bits (296), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 48/52 (92%), Positives = 51/52 (98%)
Query: 38 PQKCPRCESLNTKFCYYNNYSLSQPRYFCKTCRRYWTQGGTLRNVPVGGGCR 89
PQKCPRCES +TKFCYYNNYSLSQPRYFCKTCRRYWT+GGTLRN+PVGGGCR
Sbjct: 72 PQKCPRCESTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCR 123
>sp|Q43385|DOF37_ARATH Dof zinc finger protein DOF3.7 OS=Arabidopsis thaliana GN=DOF3.7
PE=1 SV=2
Length = 296
Score = 115 bits (289), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 95/178 (53%), Gaps = 15/178 (8%)
Query: 30 QQQQEQPQPQ-KCPRCESLNTKFCYYNNYSLSQPRYFCKTCRRYWTQGGTLRNVPVGGGC 88
+ ++ +PQ + CPRC S NTKFCYYNNYSL+QPRYFCK CRRYWT+GG+LRNVPVGG
Sbjct: 64 ETRKARPQEKVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSS 123
Query: 89 RKGKRTKT--SSVSGEASRASQPPQPPSPPHPNLTTTQQNILSSSNPVITT----GPPVL 142
RK KR+ T +S S PP S PN + N+LS PV+ +L
Sbjct: 124 RKNKRSSTPLASPSNPKLPDLNPPILFSSQIPNKSNKDLNLLSF--PVMQDHHHHALELL 181
Query: 143 RTKLEPAAASPSMGSYYPSGGFLSSLAAIQSQSFNPQPLHQAFNVG---GADHHHNIG 197
R+ +S M ++ P S+ S F P ++ N DHH IG
Sbjct: 182 RSN---GVSSRGMNTFLPGQMMDSNSVLYSSLGFPTMPDYKQSNNNLSFSIDHHQGIG 236
>sp|Q8LAP8|DOF46_ARATH Dof zinc finger protein DOF4.6 OS=Arabidopsis thaliana GN=DOF4.6
PE=2 SV=2
Length = 342
Score = 115 bits (287), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 55/68 (80%)
Query: 26 GTENQQQQEQPQPQKCPRCESLNTKFCYYNNYSLSQPRYFCKTCRRYWTQGGTLRNVPVG 85
G E + + E+ Q CPRC S NTKFCYYNNYSL+QPRYFCK CRRYWT+GG+LRN+PVG
Sbjct: 40 GGERKARPEKDQAVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNIPVG 99
Query: 86 GGCRKGKR 93
GG RK KR
Sbjct: 100 GGSRKNKR 107
>sp|Q9SVC5|DOF35_ARATH Dof zinc finger protein DOF3.5 OS=Arabidopsis thaliana GN=DOF3.5
PE=3 SV=1
Length = 247
Score = 115 bits (287), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 48/58 (82%), Positives = 53/58 (91%)
Query: 41 CPRCESLNTKFCYYNNYSLSQPRYFCKTCRRYWTQGGTLRNVPVGGGCRKGKRTKTSS 98
CPRC S NTKFCYYNNYSL+QPRYFCK CRRYWT+GG+LRNVPVGGGCRK +R K+SS
Sbjct: 27 CPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKSRRPKSSS 84
>sp|P68349|DOF12_ARATH Dof zinc finger protein DOF1.2 OS=Arabidopsis thaliana GN=DOF1.2
PE=2 SV=1
Length = 260
Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 55/67 (82%)
Query: 32 QQEQPQPQKCPRCESLNTKFCYYNNYSLSQPRYFCKTCRRYWTQGGTLRNVPVGGGCRKG 91
+QE CPRC S NTKFCYYNNYSLSQPRYFCK CRRYWT+GG+LRN+PVGGGCRK
Sbjct: 31 EQEAITAPACPRCASSNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNIPVGGGCRKR 90
Query: 92 KRTKTSS 98
R++ +S
Sbjct: 91 SRSRQNS 97
>sp|Q9SUA9|DOF44_ARATH Dof zinc finger protein DOF4.4 OS=Arabidopsis thaliana GN=DOF4.4
PE=3 SV=1
Length = 210
Score = 113 bits (282), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/93 (59%), Positives = 63/93 (67%), Gaps = 7/93 (7%)
Query: 36 PQPQKCPRCESLNTKFCYYNNYSLSQPRYFCKTCRRYWTQGGTLRNVPVGGGCRKGKRTK 95
P + CPRC+S NTKFC+YNNYS SQPRYFCK CRRYWT GG LRN+PVGG CRK KR K
Sbjct: 21 PPSRVCPRCDSDNTKFCFYNNYSESQPRYFCKNCRRYWTHGGALRNIPVGGSCRKPKRLK 80
Query: 96 T--SSVSGEASRASQPPQPPSPPHPNLTTTQQN 126
SS+S S +QP H + TQ+N
Sbjct: 81 VDQSSISEMVSVENQPIN-----HQSFRQTQEN 108
>sp|Q9M2U1|DOF36_ARATH Dof zinc finger protein DOF3.6 OS=Arabidopsis thaliana GN=DOF3.6
PE=1 SV=2
Length = 323
Score = 112 bits (281), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 65/85 (76%), Gaps = 6/85 (7%)
Query: 19 RLKTMQGGTENQQQQEQPQPQK---CPRCESLNTKFCYYNNYSLSQPRYFCKTCRRYWTQ 75
R+ +M E + + P P+ CPRC+S NTKFCY+NNYSL+QPR+FCKTCRRYWT+
Sbjct: 56 RVNSM---VERARIAKVPLPEAALNCPRCDSTNTKFCYFNNYSLTQPRHFCKTCRRYWTR 112
Query: 76 GGTLRNVPVGGGCRKGKRTKTSSVS 100
GG+LRNVPVGGG R+ KR+K+ S S
Sbjct: 113 GGSLRNVPVGGGFRRNKRSKSRSKS 137
>sp|Q9LSL6|DOF57_ARATH Dof zinc finger protein DOF5.7 OS=Arabidopsis thaliana GN=DOF5.7
PE=2 SV=1
Length = 316
Score = 112 bits (281), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 46/58 (79%), Positives = 52/58 (89%)
Query: 37 QPQKCPRCESLNTKFCYYNNYSLSQPRYFCKTCRRYWTQGGTLRNVPVGGGCRKGKRT 94
Q KCPRC S NTKFCYYNNYSLSQPR+FCK+CRRYWT+GG LRNVP+GGGCRK K++
Sbjct: 39 QNLKCPRCNSPNTKFCYYNNYSLSQPRHFCKSCRRYWTRGGALRNVPIGGGCRKTKKS 96
>sp|Q9M1E6|DOF32_ARATH Dof zinc finger protein DOF3.2 OS=Arabidopsis thaliana GN=DOF3.2
PE=2 SV=1
Length = 245
Score = 112 bits (280), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 49/84 (58%), Positives = 63/84 (75%), Gaps = 10/84 (11%)
Query: 27 TENQQQQEQP----------QPQKCPRCESLNTKFCYYNNYSLSQPRYFCKTCRRYWTQG 76
T++ Q Q++P Q +CPRC+S NTKFCYYNNYSLSQPRYFCK+CRRYWT+G
Sbjct: 18 TQDYQNQKKPLSATRPAPPEQSLRCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKG 77
Query: 77 GTLRNVPVGGGCRKGKRTKTSSVS 100
G LRN+P+GG RK KR+ +++ S
Sbjct: 78 GILRNIPIGGAYRKHKRSSSATKS 101
>sp|Q8L9V6|DOF11_ARATH Dof zinc finger protein DOF1.1 OS=Arabidopsis thaliana GN=DOF1.1
PE=1 SV=2
Length = 331
Score = 112 bits (279), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 44/56 (78%), Positives = 50/56 (89%)
Query: 38 PQKCPRCESLNTKFCYYNNYSLSQPRYFCKTCRRYWTQGGTLRNVPVGGGCRKGKR 93
P KCPRC+S NTKFCYYNNY+L+QPR+FCK CRRYWTQGG LRNVPVGGGCR+ +
Sbjct: 76 PLKCPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQGGALRNVPVGGGCRRNNK 131
>sp|Q9FZA4|DOF14_ARATH Dof zinc finger protein DOF1.4 OS=Arabidopsis thaliana GN=DOF1.4
PE=2 SV=1
Length = 311
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 46/56 (82%), Positives = 50/56 (89%)
Query: 40 KCPRCESLNTKFCYYNNYSLSQPRYFCKTCRRYWTQGGTLRNVPVGGGCRKGKRTK 95
KCPRC+S NTKFCYYNNYSLSQPR+FCK C+RYWT+GGTLRNVPVGG RK KR K
Sbjct: 28 KCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGSYRKNKRVK 83
>sp|Q9LZ56|DOF51_ARATH Dof zinc finger protein DOF5.1 OS=Arabidopsis thaliana GN=DOF5.1
PE=2 SV=1
Length = 399
Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 43/54 (79%), Positives = 50/54 (92%)
Query: 40 KCPRCESLNTKFCYYNNYSLSQPRYFCKTCRRYWTQGGTLRNVPVGGGCRKGKR 93
KCPRC+S NTKFCY+NNYSL+QPR+FCK CRRYWT+GG LR+VPVGGGCR+ KR
Sbjct: 96 KCPRCDSTNTKFCYFNNYSLTQPRHFCKACRRYWTRGGALRSVPVGGGCRRNKR 149
>sp|O82155|DOF17_ARATH Dof zinc finger protein DOF1.7 OS=Arabidopsis thaliana GN=DOF1.7
PE=2 SV=1
Length = 194
Score = 109 bits (273), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 50/80 (62%), Positives = 60/80 (75%), Gaps = 2/80 (2%)
Query: 21 KTMQGGTENQQQQEQPQPQ--KCPRCESLNTKFCYYNNYSLSQPRYFCKTCRRYWTQGGT 78
++M T Q Q E P+ + KCPRC+S NTKFCYYNNY+LSQPR+FCK CRRYWT+GG
Sbjct: 13 QSMMMTTAKQNQPELPEQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGA 72
Query: 79 LRNVPVGGGCRKGKRTKTSS 98
LRN+PVGGG RK + SS
Sbjct: 73 LRNIPVGGGTRKSNKRSGSS 92
>sp|Q9ZV33|DOF22_ARATH Dof zinc finger protein DOF2.2 OS=Arabidopsis thaliana GN=DOF2.2
PE=2 SV=2
Length = 340
Score = 109 bits (272), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 41/51 (80%), Positives = 48/51 (94%)
Query: 40 KCPRCESLNTKFCYYNNYSLSQPRYFCKTCRRYWTQGGTLRNVPVGGGCRK 90
KCPRC+S NTKFCY+NNY+L+QPR+FCK CRRYWT+GG LRNVPVGGGCR+
Sbjct: 95 KCPRCDSANTKFCYFNNYNLTQPRHFCKACRRYWTRGGALRNVPVGGGCRR 145
>sp|Q9M161|DOF41_ARATH Dof zinc finger protein DOF4.1 OS=Arabidopsis thaliana GN=DOF4.1
PE=2 SV=2
Length = 294
Score = 109 bits (272), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 44/57 (77%), Positives = 51/57 (89%)
Query: 37 QPQKCPRCESLNTKFCYYNNYSLSQPRYFCKTCRRYWTQGGTLRNVPVGGGCRKGKR 93
+P+ CPRC S NTKFCYYNNYSL+QPRY CK+CRRYWT+GG+LRNVPVGGG RK K+
Sbjct: 66 EPRNCPRCNSSNTKFCYYNNYSLAQPRYLCKSCRRYWTEGGSLRNVPVGGGSRKNKK 122
>sp|Q84JQ8|DOF18_ARATH Dof zinc finger protein DOF1.8 OS=Arabidopsis thaliana GN=DOF1.8
PE=2 SV=1
Length = 352
Score = 108 bits (270), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 44/62 (70%), Positives = 50/62 (80%)
Query: 27 TENQQQQEQPQPQKCPRCESLNTKFCYYNNYSLSQPRYFCKTCRRYWTQGGTLRNVPVGG 86
E + + E+ Q CPRC SLNTKFCYYNNYSL+QPRYFCK CRRYWT GG+LRN+PVGG
Sbjct: 37 VERKARPEKDQALNCPRCNSLNTKFCYYNNYSLTQPRYFCKDCRRYWTAGGSLRNIPVGG 96
Query: 87 GC 88
G
Sbjct: 97 GV 98
>sp|Q39088|DOF34_ARATH Dof zinc finger protein DOF3.4 OS=Arabidopsis thaliana GN=DOF3.4
PE=1 SV=2
Length = 253
Score = 105 bits (261), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 47/69 (68%), Positives = 56/69 (81%), Gaps = 5/69 (7%)
Query: 29 NQQQQEQPQPQKCPRCESLNTKFCYYNNYSLSQPRYFCKTCRRYWTQGGTLRNVPVGGGC 88
+ QQ++ P CPRC+S NTKFCYYNNY+ SQPR+FCK CRRYWT GGTLR+VPVGGG
Sbjct: 24 SDQQEQLP----CPRCDSSNTKFCYYNNYNFSQPRHFCKACRRYWTHGGTLRDVPVGGGT 79
Query: 89 RK-GKRTKT 96
RK KR++T
Sbjct: 80 RKSAKRSRT 88
>sp|Q9FGD6|DOF58_ARATH Dof zinc finger protein DOF5.8 OS=Arabidopsis thaliana GN=DOF5.8
PE=2 SV=1
Length = 225
Score = 105 bits (261), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 65/93 (69%), Gaps = 5/93 (5%)
Query: 16 QDRRLKTM---QGGTENQQQQEQPQPQKCPRCESLNTKFCYYNNYSLSQPRYFCKTCRRY 72
+ RR+ + QGG+ +Q Q CPRCES NTKFCYYNNY+ SQPR+FCK+CRRY
Sbjct: 7 ESRRVPKIPHGQGGSVAIPTDQQEQ-LSCPRCESTNTKFCYYNNYNFSQPRHFCKSCRRY 65
Query: 73 WTQGGTLRNVPVGGGCRK-GKRTKTSSVSGEAS 104
WT GGTLR++PVGG RK KR++T S + S
Sbjct: 66 WTHGGTLRDIPVGGVSRKSSKRSRTYSSAATTS 98
>sp|Q94AR6|DOF31_ARATH Dof zinc finger protein DOF3.1 OS=Arabidopsis thaliana GN=DOF3.1
PE=2 SV=2
Length = 204
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 43/51 (84%), Positives = 48/51 (94%)
Query: 40 KCPRCESLNTKFCYYNNYSLSQPRYFCKTCRRYWTQGGTLRNVPVGGGCRK 90
KCPRC+S NTKFCYYNNY+LSQPR+FCK+CRRYWT+GG LRNVPVGGG RK
Sbjct: 30 KCPRCDSPNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGALRNVPVGGGSRK 80
>sp|Q84K52|DOF47_ARATH Dof zinc finger protein DOF4.7 OS=Arabidopsis thaliana GN=DOF4.7
PE=2 SV=1
Length = 246
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 56/77 (72%), Gaps = 6/77 (7%)
Query: 18 RRLKTMQGGTENQQQQEQPQPQ-----KCPRCESLNTKFCYYNNYSLSQPRYFCKTCRRY 72
RR+KT Q ++P P KCPRC+S+NTKFCYYNNYSLSQPR++CK CRRY
Sbjct: 16 RRIKT-TAKPPRQINNKEPSPATQPVLKCPRCDSVNTKFCYYNNYSLSQPRHYCKNCRRY 74
Query: 73 WTQGGTLRNVPVGGGCR 89
WT+GG LRNVP+GG R
Sbjct: 75 WTRGGALRNVPIGGSTR 91
>sp|Q9ZPY0|DOF25_ARATH Dof zinc finger protein DOF2.5 OS=Arabidopsis thaliana GN=DOF2.5
PE=2 SV=3
Length = 369
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 42/57 (73%), Positives = 50/57 (87%), Gaps = 1/57 (1%)
Query: 31 QQQEQPQPQ-KCPRCESLNTKFCYYNNYSLSQPRYFCKTCRRYWTQGGTLRNVPVGG 86
+++ +PQ + CPRC S NTKFCYYNNYSL+QPRYFCK CRRYWT+GG+LRNVPVGG
Sbjct: 71 ERKARPQEKLNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGG 127
>sp|Q93ZL5|CDF2_ARATH Cyclic dof factor 2 OS=Arabidopsis thaliana GN=CDF2 PE=1 SV=2
Length = 457
Score = 102 bits (255), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 61/86 (70%), Gaps = 5/86 (5%)
Query: 12 ERKQQDRRLKTMQ--GGTENQQQQEQPQPQK---CPRCESLNTKFCYYNNYSLSQPRYFC 66
E+ + + KT + GGT Q+ + +P K CPRC S+ TKFCYYNNY+++QPR+FC
Sbjct: 106 EKTETTKAAKTNEESGGTACSQEGKLKKPDKILPCPRCNSMETKFCYYNNYNVNQPRHFC 165
Query: 67 KTCRRYWTQGGTLRNVPVGGGCRKGK 92
K C+RYWT GGT+RNVPVG G RK K
Sbjct: 166 KKCQRYWTAGGTMRNVPVGAGRRKNK 191
>sp|Q8LFV3|CDF3_ARATH Cyclic dof factor 3 OS=Arabidopsis thaliana GN=CDF3 PE=1 SV=2
Length = 448
Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 54/71 (76%), Gaps = 6/71 (8%)
Query: 41 CPRCESLNTKFCYYNNYSLSQPRYFCKTCRRYWTQGGTLRNVPVGGGCRKGK------RT 94
CPRC+S+ TKFCYYNNY+++QPR+FCK C+RYWT GGT+RNVPVG G RK K R
Sbjct: 112 CPRCKSMETKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNKSSSSHYRH 171
Query: 95 KTSSVSGEASR 105
T S + EA+R
Sbjct: 172 ITISEALEAAR 182
>sp|P38564|MNB1A_MAIZE Dof zinc finger protein MNB1A OS=Zea mays GN=MNB1A PE=1 SV=2
Length = 238
Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 41/50 (82%), Positives = 45/50 (90%)
Query: 41 CPRCESLNTKFCYYNNYSLSQPRYFCKTCRRYWTQGGTLRNVPVGGGCRK 90
CPRC S +TKFCYYNNY+ SQPR+FCK CRRYWT+GGTLRNVPVGGG RK
Sbjct: 49 CPRCASRDTKFCYYNNYNTSQPRHFCKGCRRYWTKGGTLRNVPVGGGTRK 98
>sp|Q9SEZ3|CDF5_ARATH Cyclic dof factor 5 OS=Arabidopsis thaliana GN=CDF5 PE=2 SV=1
Length = 399
Score = 99.8 bits (247), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 46/52 (88%)
Query: 41 CPRCESLNTKFCYYNNYSLSQPRYFCKTCRRYWTQGGTLRNVPVGGGCRKGK 92
CPRCES NTKFCYYNNY+++QPRYFC+ C+RYWT GG++RNVPVG G RK K
Sbjct: 134 CPRCESANTKFCYYNNYNVNQPRYFCRNCQRYWTAGGSMRNVPVGSGRRKNK 185
>sp|Q9SX97|DOF16_ARATH Dof zinc finger protein DOF1.6 OS=Arabidopsis thaliana GN=DOF1.6
PE=2 SV=1
Length = 209
Score = 99.8 bits (247), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 40/51 (78%), Positives = 46/51 (90%)
Query: 37 QPQKCPRCESLNTKFCYYNNYSLSQPRYFCKTCRRYWTQGGTLRNVPVGGG 87
+P CPRC S TKFCYYNNY+L+QPRY+CK+CRRYWTQGGTLR+VPVGGG
Sbjct: 27 EPLPCPRCNSTTTKFCYYNNYNLAQPRYYCKSCRRYWTQGGTLRDVPVGGG 77
>sp|Q8W1E3|CDF1_ARATH Cyclic dof factor 1 OS=Arabidopsis thaliana GN=CDF1 PE=1 SV=2
Length = 298
Score = 99.0 bits (245), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 60/86 (69%), Gaps = 4/86 (4%)
Query: 8 GSSEERKQQDRRLKTMQGGTENQQQQEQP-QPQKCPRCESLNTKFCYYNNYSLSQPRYFC 66
EE K Q+ KT+ +E + ++P + CPRC S+ TKFCYYNNY+++QPR+FC
Sbjct: 25 ADEEEEKNQN---KTLTDQSEKDKTLKKPTKILPCPRCNSMETKFCYYNNYNVNQPRHFC 81
Query: 67 KTCRRYWTQGGTLRNVPVGGGCRKGK 92
K C+RYWT GGT+R+VP+G G RK K
Sbjct: 82 KACQRYWTSGGTMRSVPIGAGRRKNK 107
>sp|Q9SUB0|DOF43_ARATH Dof zinc finger protein DOF4.3 OS=Arabidopsis thaliana GN=DOF4.3
PE=3 SV=1
Length = 232
Score = 98.6 bits (244), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 51/71 (71%), Gaps = 3/71 (4%)
Query: 41 CPRCESLNTKFCYYNNYSLSQPRYFCKTCRRYWTQGGTLRNVPVGGGCRKGKRTKTS--S 98
C RC+S NTKFCYYNNYS QPRYFCK CRRYWT GG LRNVP+GG R KRT+ + S
Sbjct: 27 CARCDSDNTKFCYYNNYSEFQPRYFCKNCRRYWTHGGALRNVPIGGSSR-AKRTRINQPS 85
Query: 99 VSGEASRASQP 109
V+ S QP
Sbjct: 86 VAQMVSVGIQP 96
>sp|Q9LQX4|DOF13_ARATH Dof zinc finger protein DOF1.3 OS=Arabidopsis thaliana GN=DOF1.3
PE=2 SV=1
Length = 366
Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 60/91 (65%), Gaps = 5/91 (5%)
Query: 5 ERGGSSEERKQQDRRLKTMQGGTENQQQQEQPQPQK---CPRCESLNTKFCYYNNYSLSQ 61
E +SE Q + T+ +E ++ E +P K CPRC S +TKFCYYNNY+++Q
Sbjct: 70 ESKETSENSDDQHSEITTI--TSEEEKTTELKKPDKILPCPRCNSADTKFCYYNNYNVNQ 127
Query: 62 PRYFCKTCRRYWTQGGTLRNVPVGGGCRKGK 92
PR+FC+ C+RYWT GG++R VPVG G RK K
Sbjct: 128 PRHFCRKCQRYWTAGGSMRIVPVGSGRRKNK 158
>sp|O49550|DOF45_ARATH Dof zinc finger protein DOF4.5 OS=Arabidopsis thaliana GN=DOF4.5
PE=3 SV=1
Length = 249
Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/76 (56%), Positives = 49/76 (64%), Gaps = 7/76 (9%)
Query: 41 CPRCESLNTKFCYYNNYSLSQPRYFCKTCRRYWTQGGTLRNVPVGGGCRKGKRTKTSS-- 98
C RC+S NTKFCYYNNY QPRYFCK CRRYWT GG LRN+P+GG R KR + +
Sbjct: 27 CARCDSDNTKFCYYNNYCEFQPRYFCKNCRRYWTHGGALRNIPIGGSSR-AKRARVNQPS 85
Query: 99 ----VSGEASRASQPP 110
VS E R + P
Sbjct: 86 VARMVSVETQRGNNQP 101
>sp|O22967|CDF4_ARATH Cyclic dof factor 4 OS=Arabidopsis thaliana GN=CDF4 PE=2 SV=1
Length = 170
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 37/52 (71%), Positives = 44/52 (84%)
Query: 41 CPRCESLNTKFCYYNNYSLSQPRYFCKTCRRYWTQGGTLRNVPVGGGCRKGK 92
CPRC+S+ TKFCY+NNY+++QPR+FCK C RYWT GG LRNVPVG G RK K
Sbjct: 60 CPRCKSMETKFCYFNNYNVNQPRHFCKGCHRYWTAGGALRNVPVGAGRRKSK 111
>sp|P68350|DOF15_ARATH Dof zinc finger protein DOF1.5 OS=Arabidopsis thaliana GN=DOF1.5
PE=1 SV=1
Length = 175
Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 37/52 (71%), Positives = 45/52 (86%)
Query: 41 CPRCESLNTKFCYYNNYSLSQPRYFCKTCRRYWTQGGTLRNVPVGGGCRKGK 92
CPRC+S+ TKFCY+NNY+++QPR+FCK C+RYWT GG LRNVPVG G RK K
Sbjct: 64 CPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKSK 115
>sp|Q9SUB1|DOF42_ARATH Dof zinc finger protein DOF4.2 OS=Arabidopsis thaliana GN=DOF4.2
PE=3 SV=1
Length = 194
Score = 78.2 bits (191), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Query: 28 ENQQQQEQPQPQKCPRCESLNTKFCYYNNYSLSQPRYFCKTCRRYWTQGGTLRNVPVGGG 87
E+ + P P+ CPRC S T+F Y+NN SQPRY CK C R WT GG LRN+PV G
Sbjct: 10 EDNEMNVMPPPRVCPRCYSDQTRFSYFNNNKKSQPRYKCKNCCRCWTHGGVLRNIPVTGI 69
Query: 88 CRKGKRTKT--SSVS 100
C K K SSVS
Sbjct: 70 CDKSNLPKIDQSSVS 84
>sp|Q54PU2|GATC_DICDI Glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial
OS=Dictyostelium discoideum GN=gatc PE=3 SV=3
Length = 99
Score = 32.7 bits (73), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 36/74 (48%), Gaps = 14/74 (18%)
Query: 162 GGFLSSLAAIQS-QSFNPQPLHQAFN-----------VGGADHHHNIGGSSNLDLLQGFS 209
GGFL+S+ +IQS + N +PLH DH H + S+N+ GF
Sbjct: 17 GGFLNSVESIQSVNTENVRPLHSILEDTQLTLHFEQTTVNQDHEHILDHSNNVQ--GGFF 74
Query: 210 TVPSFGSSHTQHQQ 223
TVP SSHT Q+
Sbjct: 75 TVPKQISSHTNSQK 88
>sp|O94130|CREA_BOTFU DNA-binding protein creA OS=Botryotinia fuckeliana GN=creA PE=3
SV=1
Length = 435
Score = 31.6 bits (70), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 22 TMQGGTENQQQQEQPQPQKCPRCE 45
TM GG +Q+ P+P KCP CE
Sbjct: 56 TMVGGHHGDDRQDLPRPYKCPLCE 79
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.126 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 138,950,523
Number of Sequences: 539616
Number of extensions: 6073298
Number of successful extensions: 52324
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 198
Number of HSP's successfully gapped in prelim test: 367
Number of HSP's that attempted gapping in prelim test: 40406
Number of HSP's gapped (non-prelim): 10133
length of query: 336
length of database: 191,569,459
effective HSP length: 118
effective length of query: 218
effective length of database: 127,894,771
effective search space: 27881060078
effective search space used: 27881060078
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 61 (28.1 bits)