BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042165
(983 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9C5E7|PUM6_ARATH Pumilio homolog 6, chloroplastic OS=Arabidopsis thaliana GN=APUM6
PE=1 SV=1
Length = 861
Score = 758 bits (1957), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/1002 (46%), Positives = 597/1002 (59%), Gaps = 168/1002 (16%)
Query: 1 MATESPIRMSETSGKWPALKKAAAFAHSSASMAAEELGLLQKGCDVHGSVQRAVPNRSGS 60
MATE+PIR+S ++ +W +K + VPNRSGS
Sbjct: 1 MATENPIRISGSNERWSNSRKVS------------------------------VPNRSGS 30
Query: 61 APPNMEGSFLAIENLIARKSSSSGVNLANFNGNIRNSESEERLQANQTCLKYYGSNVNLN 120
APPNMEGSFLA++NL++R+ G++ N+ R + + S +LN
Sbjct: 31 APPNMEGSFLAVDNLLSRQG-----------GSVYNNLMLPRYGFEEPVTTHPSSKHSLN 79
Query: 121 PRLP----------RHLDHDLNRFGNRRGLTSLDNSSNCSVHVSQVTLSTHKEESEDDRS 170
R+P + +D+ + RF + +GL N N +H+SQ LSTHKE SED+ S
Sbjct: 80 -RIPSPPIYYPTEYQFIDNRVGRFRSNQGL----NKVNSPIHLSQGKLSTHKEVSEDESS 134
Query: 171 PKHFSDEMVDRKNGFCSGNEAVKVAGQNRNLVDIKQEDFPRSSSPVYNQSHSFGYSDSSS 230
+ + + DR +G ++++ +++L D +Q+D +P +++S+S
Sbjct: 135 QQLSVNSVSDRTDGL-----DIRLSPGSQSLADFRQDDTSSGQTPQHSRSNS-------- 181
Query: 231 LRDPSVISSNGVSTTTGAHNTGVSSKVDVSTAYNVSSSSHDWTATISSTPPTEEVTSNDT 290
SNG +V+TA D + S +++V D
Sbjct: 182 --------SNG----------------EVNTA--------DESGNFSEL--SDDVVVKDN 207
Query: 291 DIWTKDEVLDRDISHSDISVIISNMKDFNTGHSNLGNQK-------NQAQLNVHSQVSSS 343
T + + S D S IIS MK N S G K Q + H Q +++
Sbjct: 208 AASTARASIGNEKS-PDESTIISKMKSTNI--SGPGTAKYPREPRYGQPERQPHQQQNNA 264
Query: 344 SQVENAHSQVSSLGLIGTHIGMDQFHHG-PSRPSTAVQPVVQSSGFTPPLY--ASAAAYM 400
+ ++ S + S G+ IG QFH+G P + S QPV+QSSGFTPPL A+ AYM
Sbjct: 265 TWIQGG-SNMGSHGVNDAVIGAGQFHYGQPYKFSGDGQPVLQSSGFTPPLLYTATQTAYM 323
Query: 401 ASPNPFYSNVQAPGFYSPQYGVGGYVMNSSIGPPLVAGYPPHGGIAMVLDGSAGPSFHPQ 460
SP Y N+Q+P YSPQYG G Y +++ P + GYP HG + +V+ P F PQ
Sbjct: 324 TSPAHVY-NMQSPAVYSPQYGYGPY---TNMIPQFMPGYPSHGSVPVVVS----PDFIPQ 375
Query: 461 PSGVSTGGSVVHGSDMQYLNKIYGQFGFSLQPSFANPLHLQYYQQPFGEAYNISGQFEPL 520
SG S GSVVHG +MQY K+Y G QPSF +P+++QY QQ FG Q EPL
Sbjct: 376 LSGPS-AGSVVHGGEMQYAEKLYVPPG---QPSFPDPMYMQYCQQSFG-------QMEPL 424
Query: 521 GSKGGVLGSHTNSHELKKGSDMAASDVQTFQHYRSGETENPSTSKVTVSPYHMGNPPNMG 580
+ +HTN+ E +K D + + R N + + V+ Y G PNMG
Sbjct: 425 APR-----NHTNAPESQK------DDPKFLRQIRGPSNSNMARPGMGVNYY--GIQPNMG 471
Query: 581 MFV-YPSSPLASPALPGSPVVGTGLLGGRNEMRFSPVSNRYSGWQGQRGFESYNDPKICN 639
+ V Y + L P PG P Y GWQ Q E N P++CN
Sbjct: 472 IMVQYLPTHLGPPLSPG----------------HVPYVEAYPGWQPQGSLEGANGPRLCN 515
Query: 640 FLEELKSGKGRRFELSDITGHIVEFSADQHGSRFIQQKLENCSVDEKASVFKEILPHASK 699
FLEELKSGKGRRF+LSDITGHIVEFSADQHGSRFIQQKLENC +EKA+VF+EILPHA K
Sbjct: 516 FLEELKSGKGRRFDLSDITGHIVEFSADQHGSRFIQQKLENCKPEEKAAVFREILPHACK 575
Query: 700 LMTDVFGNYVIQKFFEYGSPAQRKELANQLVGQILPLSMQMYGCRVIQKALETIEIEQKA 759
LMTDVFGNYVIQKFFEYG+ QRKELA+QL+GQI+PLS+QMYGCRVIQKAL+ IE +Q+
Sbjct: 576 LMTDVFGNYVIQKFFEYGNSTQRKELADQLMGQIVPLSLQMYGCRVIQKALDVIEPDQRV 635
Query: 760 QLVRELDGQVMRCVRDQNGNHVIQKCIECIPPEKIGFIISAFCGQVAALSMHPYGCRVIQ 819
+L RELDGQVMRCVRDQNGNHVIQKCIE IP +K+GF++ AF GQV++LSMHPYGCRVIQ
Sbjct: 636 RLARELDGQVMRCVRDQNGNHVIQKCIENIPADKVGFMLYAFRGQVSSLSMHPYGCRVIQ 695
Query: 820 RVLEHCADKHQCQFIVDEILDNVCALAQDQYGNYVTQHVLQRGKPLERSKIIRKLSGHIV 879
R+LE C+ HQC+FI +EIL++VC L++DQYGNYVTQHVL++G ER +I RKLSGHIV
Sbjct: 696 RLLERCSHDHQCRFITEEILESVCVLSKDQYGNYVTQHVLEKGTSEERERIGRKLSGHIV 755
Query: 880 QLSQHKFASNVIEKCLAYGGPAERELIIEEILGHNE--ETLLTMMKDQFANYVVQKIFEL 937
QLS HKFASNVIEKCL YGG ER+LII+EI G +E +LL MMKDQ+ NYVVQKIFE
Sbjct: 756 QLSLHKFASNVIEKCLEYGGRVERDLIIKEIAGPDESYNSLLMMMKDQYGNYVVQKIFET 815
Query: 938 SSESQQAMMLSRIRTHAHVLKKYTYGKHIVARFEMLIGEENQ 979
+ Q+ + SR+R HA LKKYTYGKHIV+R E EENQ
Sbjct: 816 CTADQRLTLFSRVRMHASALKKYTYGKHIVSRLEQPSIEENQ 857
>sp|Q9LJX4|PUM5_ARATH Pumilio homolog 5 OS=Arabidopsis thaliana GN=APUM5 PE=1 SV=2
Length = 961
Score = 699 bits (1805), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/1020 (44%), Positives = 577/1020 (56%), Gaps = 123/1020 (12%)
Query: 3 TESPIRMSETS--GKWPALKKAAAFAHSSASMAAEELGLLQKGCDVHGSVQRA-VPNRSG 59
T+S +RM E W A + F S MA E+LG L K + Q P+RS
Sbjct: 4 TQSAMRMVEGDHIKNWQASSDSGIFG--SLDMAVEDLGFLMKRNRLDSGDQTGKFPSRSE 61
Query: 60 SAPPNMEGSFLAIENLIARKSSSSGVNLANFNGNIRNSESEERLQANQTCLKYYGSNVNL 119
SAPP+MEGSF A+ NL+ ++ SS L+ I N +SEE ++++ + YY SN+NL
Sbjct: 62 SAPPSMEGSFAALRNLLKQQEGSSSEVLSR---AIENYDSEEEIRSDPAYVAYYLSNINL 118
Query: 120 NPRLP-----RHLDHDLNRFG--NRRGLTSLDNSS-NCSVHVSQVTLSTHKEESEDDRSP 171
NPRLP R H L FG N+ TS DN S+H S+ LSTH+EE ED+ S
Sbjct: 119 NPRLPPPLISRENQHLLRHFGDNNQSPTTSWDNMGIRSSLHSSRTALSTHREEPEDEAS- 177
Query: 172 KHFSDEMVDRKNGFCSGNEA--VKVAGQNRNLVDIKQEDFPRSSSPVYNQSHSFGYSDSS 229
SG + +AG+ +++ D+ QEDFP + S V+ + HS G +
Sbjct: 178 ---------------SGEQQSYASLAGRRKSIADMIQEDFPLTLSSVFKRPHSAG--NRP 220
Query: 230 SLRDPSVISSNGVSTTTGAHNTGVSSKVDVSTAYNVSSSSHDWTATISSTPPTEEVTSND 289
+D ISS+ +++ A S V+ S S D A S P T ++ S
Sbjct: 221 IAQDIHAISSD--TSSEHARRLPESDINSVNLLRETDSLSSD--AIASEDPFTTDLASQS 276
Query: 290 TDIWTKDEVLDRDISHSD--ISV--------IISNMKDFNTGHSNLGNQKNQAQLNVHSQ 339
+ + R SH D +SV + S M+ N +Q++Q +
Sbjct: 277 FTNAQTERLNARQASHEDNNLSVFGASPPSSVASRMR------RNQEDQQSQGRRMPPQY 330
Query: 340 VSSSSQVENAHSQVSSLGLIGTHIGMDQFHHGPSRPSTAVQPVVQSS-GFT-PPLYASAA 397
SS QV+ + Q S IG D P + V QS G PP+Y S A
Sbjct: 331 TPSSYQVQASSPQQMSYPRIGG--TQDMMQSLPKIATGEVHSTFQSPHGLAPPPMYTSTA 388
Query: 398 AYMASPNPFY-SNVQAPGFYSPQYGVGGYVMNSSIGPPLVAGYPPH-GGIAMVLDGSAGP 455
AYM S +PFY N Q+ G + PQY GGY S I P ++GYP H + M D S+
Sbjct: 389 AYMTSLSPFYHQNFQSSGMFVPQYNYGGYPPASGIVPQYMSGYPSHEATVPMPYDISSTS 448
Query: 456 SFHPQPS---GVSTGGSVVHGSDMQYLNKIYGQFGFSLQPSFANPLHLQYYQQPFGEAYN 512
S + P GVS+ G + PS +P LQY+QQ +AY
Sbjct: 449 SGYNNPRLLPGVSSSGQNI--------------------PSLVDPFQLQYFQQAQVDAYA 488
Query: 513 ISGQFEPLGSKGGVLGSHTNSHELKKGSDMAASDVQTFQHYRSGETENPSTSK--VTVSP 570
P S G D Q + + E N S SP
Sbjct: 489 -----PPFQSSTDSFGQ---------------KDQQAVGYMANHEPLNSPLSPGYGLQSP 528
Query: 571 YHMGN----PPNMG-MFVYPSSPLASPALPGSPVVG-TGLLGGRNEMRF---SPVSNR-- 619
HMGN PP + M YP SPLASP +P SPV G G R+E R+ P N
Sbjct: 529 RHMGNYFAVPPGVRVMPQYPGSPLASPVMPSSPVGGMMSHFGRRSETRYHQQGPSRNTGI 588
Query: 620 -YSGWQGQRGFES--YNDPKICNFLEELKSGKGRRFELSDITGHIVEFSADQHGSRFIQQ 676
GWQG RG S +D K +FL+ELKS R+ ELSDI G +VEFS DQHGSRFIQQ
Sbjct: 589 YPGGWQGNRGGASSIVDDLKRHSFLDELKSPNARKLELSDIAGRVVEFSVDQHGSRFIQQ 648
Query: 677 KLENCSVDEKASVFKEILPHASKLMTDVFGNYVIQKFFEYGSPAQRKELANQLVGQILPL 736
KLE+CS +EKASVF E+LP ASKLMTDVFGNYVIQKF E+G+PAQR+EL QL GQ++ L
Sbjct: 649 KLEHCSDEEKASVFSEVLPQASKLMTDVFGNYVIQKFIEHGTPAQREELVKQLAGQMVSL 708
Query: 737 SMQMYGCRVIQKALETIEIEQKAQLVRELDGQVMRCVRDQNGNHVIQKCIECIPPEKIGF 796
S+QMYGCRVIQKALE I+++QK +L+RELDG V++CVRDQNGNHVIQKCIE +P +IGF
Sbjct: 709 SLQMYGCRVIQKALEVIDVDQKTELIRELDGNVLKCVRDQNGNHVIQKCIESMPAGRIGF 768
Query: 797 IISAFCGQVAALSMHPYGCRVIQRVLEHCADKHQCQFIVDEILDNVCALAQDQYGNYVTQ 856
+I+AF GQVA LS HPYGCRVIQR+LEHC+D + I+DEIL++ ALA DQYGNYVTQ
Sbjct: 769 VIAAFRGQVATLSTHPYGCRVIQRILEHCSDDEETHCIIDEILESAFALAHDQYGNYVTQ 828
Query: 857 HVLQRGKPLERSKIIRKLSGHIVQLSQHKFASNVIEKCLAYGGPAERELIIEEILGHNEE 916
HVL+RGKP ER +II KL+G++VQ+SQHK+ASNV+EKCL + ERE +IEEI+G +EE
Sbjct: 829 HVLERGKPDERRQIIEKLTGNVVQMSQHKYASNVVEKCLEHADSTEREFLIEEIMGKSEE 888
Query: 917 T--LLTMMKDQFANYVVQKIFELSSESQQAMMLSRIRTHAHVLKKYTYGKHIVARFEMLI 974
LL MMKDQFANYVVQK+ E+S + Q+ +++ R++ H L+KYTYGKHIVARFE L
Sbjct: 889 DNHLLAMMKDQFANYVVQKVLEISKDQQREILVQRMKIHLQSLRKYTYGKHIVARFEQLF 948
>sp|Q9ZW06|PUM2_ARATH Pumilio homolog 2 OS=Arabidopsis thaliana GN=APUM2 PE=1 SV=1
Length = 972
Score = 491 bits (1265), Expect = e-138, Method: Compositional matrix adjust.
Identities = 241/421 (57%), Positives = 299/421 (71%), Gaps = 21/421 (4%)
Query: 570 PYHMGNP--------PNMGMFVYPSSPLASPALPGSPVV-GTGLLGGRNEMRFSPVSNRY 620
PY G+P P G YP SPLA LP S V + + G MR+ + Y
Sbjct: 539 PYKSGSPNSHTDYGSPTFG--SYPGSPLAHHLLPNSLVSPCSPMRRGEVNMRYPSATRNY 596
Query: 621 SG-----WQGQRGFESYNDPKICNFLEELKSGKGRRFELSDITGHIVEFSADQHGSRFIQ 675
+G W S ++ + LEE KS K R FEL++I GH+VEFS+DQ+GSRFIQ
Sbjct: 597 AGGVMGSWHMD---ASLDEGFGSSMLEEFKSNKTRGFELAEIAGHVVEFSSDQYGSRFIQ 653
Query: 676 QKLENCSVDEKASVFKEILPHASKLMTDVFGNYVIQKFFEYGSPAQRKELANQLVGQILP 735
QKLE + DEK V++EI+PHA LMTDVFGNYVIQKFFE+G P QR+ELA++L +LP
Sbjct: 654 QKLETATSDEKNMVYEEIMPHALALMTDVFGNYVIQKFFEHGLPPQRRELADKLFDNVLP 713
Query: 736 LSMQMYGCRVIQKALETIEIEQKAQLVRELDGQVMRCVRDQNGNHVIQKCIECIPPEKIG 795
LS+QMYGCRVIQKA+E ++++QK ++V+ELDG VMRCVRDQNGNHV+QKCIEC+P E I
Sbjct: 714 LSLQMYGCRVIQKAIEVVDLDQKIKMVKELDGHVMRCVRDQNGNHVVQKCIECVPEENIE 773
Query: 796 FIISAFCGQVAALSMHPYGCRVIQRVLEHCADKHQCQFIVDEILDNVCALAQDQYGNYVT 855
FIIS F G V LS HPYGCRVIQRVLEHC D ++DEI+ + LAQDQYGNYV
Sbjct: 774 FIISTFFGNVVTLSTHPYGCRVIQRVLEHCHDPDTQSKVMDEIMSTISMLAQDQYGNYVI 833
Query: 856 QHVLQRGKPLERSKIIRKLSGHIVQLSQHKFASNVIEKCLAYGGPAERELIIEEILGHNE 915
QHVL+ GKP ER+ II++L+G IVQ+SQ KFASNV+EKCL +GGP ERE ++ E+LG +
Sbjct: 834 QHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNVVEKCLTFGGPEEREFLVNEMLGTTD 893
Query: 916 ET--LLTMMKDQFANYVVQKIFELSSESQQAMMLSRIRTHAHVLKKYTYGKHIVARFEML 973
E L MMKDQFANYVVQK+ E + Q+ ++L RI+ H + LKKYTYGKHIVAR E L
Sbjct: 894 ENEPLQAMMKDQFANYVVQKVLETCDDQQRELILGRIKVHLNALKKYTYGKHIVARVEKL 953
Query: 974 I 974
+
Sbjct: 954 V 954
>sp|Q9ZW07|PUM1_ARATH Pumilio homolog 1 OS=Arabidopsis thaliana GN=APUM1 PE=1 SV=1
Length = 968
Score = 491 bits (1264), Expect = e-137, Method: Compositional matrix adjust.
Identities = 293/673 (43%), Positives = 402/673 (59%), Gaps = 51/673 (7%)
Query: 323 SNLGNQKNQAQLNVHSQVSSSSQVENAHSQVSS--LGLIGTHIGMDQFHHGPSRPSTAVQ 380
S+L N + L+ + SQ E +V + GL G H ++Q H P++ A +
Sbjct: 308 SDLVNALSGLNLSCSVGLDDRSQAEQDVEKVRNYMFGLQGGHNEVNQ-HEFPNKSDQAHK 366
Query: 381 PV--VQSSGFTPPLYASAAAYMASPNPFYSNVQAPGFYSPQYGVGGYVMNSSIGPPLVAG 438
+++S P ++ + NP+ SP Y + Y +N ++ ++A
Sbjct: 367 ATGSLRNSQLRGPHGSAYNGGVGLANPYQQ------LDSPNYCLNNYALNPAVAS-MMAN 419
Query: 439 YPPHGGIAMVLDGSAGPSF------HPQPSGVSTGGSVVHGSDM-QYLNKIYGQFGFSLQ 491
+ A + D + F H VS+G ++ ++ ++ N++ G G LQ
Sbjct: 420 QLGNNNFAPMYDNVSALGFSGMDSRHHGRGFVSSGQNLSESRNLGRFSNRMMGG-GAGLQ 478
Query: 492 PSFANPLHLQYYQQPFGEAYNISGQFEPLGSKGGVLGS-HTNSHELKKGSDMAASDVQTF 550
+P++ QY A ++ +P + + GS + + EL++ + A Q
Sbjct: 479 SHMVDPMYNQY-------ADSLDLLNDPSMDRNFMGGSSYMDMLELQRAY-LGAQKSQYG 530
Query: 551 QHYRSGETENPSTSKVTVSPYHMGNPPNMGMFVYPSSPLASPALPGSPVVGTGLLGGRNE 610
Y+SG +P++ SP N YP SPLA +P S + + R+E
Sbjct: 531 VPYKSG---SPNSHSYYGSPTFGSN------MSYPGSPLAHHGMPNSLMSPYSPMR-RDE 580
Query: 611 --MRFSPVSNRYSG-----WQGQRGFESYNDPKICNFLEELKSGKGRRFELSDITGHIVE 663
MRF + YSG W S+++ + LEE KS K R FELS+I GH+VE
Sbjct: 581 VNMRFPSATRNYSGGLMGSWHMD---ASFDEGFGSSMLEEFKSNKTRGFELSEIAGHVVE 637
Query: 664 FSADQHGSRFIQQKLENCSVDEKASVFKEILPHASKLMTDVFGNYVIQKFFEYGSPAQRK 723
FS+DQ+GSRFIQQKLE + DEK V++EI+P A LMTDVFGNYVIQKFFE+G P QR+
Sbjct: 638 FSSDQYGSRFIQQKLETATTDEKNMVYEEIMPQALVLMTDVFGNYVIQKFFEHGLPPQRR 697
Query: 724 ELANQLVGQILPLSMQMYGCRVIQKALETIEIEQKAQLVRELDGQVMRCVRDQNGNHVIQ 783
ELA +L +LPLS+QMYGCRVIQKA+E ++++QK ++V+ELDG VMRCVRDQNGNHV+Q
Sbjct: 698 ELAEKLFDHVLPLSLQMYGCRVIQKAIEVVDLDQKIKMVKELDGHVMRCVRDQNGNHVVQ 757
Query: 784 KCIECIPPEKIGFIISAFCGQVAALSMHPYGCRVIQRVLEHCADKHQCQFIVDEILDNVC 843
KCIEC+P E I FIIS F G V LS HPYGCRVIQRVLEHC D +++EIL V
Sbjct: 758 KCIECVPEENIEFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHDPDTQSKVMEEILSTVS 817
Query: 844 ALAQDQYGNYVTQHVLQRGKPLERSKIIRKLSGHIVQLSQHKFASNVIEKCLAYGGPAER 903
LAQDQYGNYV QHVL+ GKP ER+ II++L+G IVQ+SQ KFASNV+EKCL +GGP ER
Sbjct: 818 MLAQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNVVEKCLTFGGPEER 877
Query: 904 ELIIEEILGHNEET--LLTMMKDQFANYVVQKIFELSSESQQAMMLSRIRTHAHVLKKYT 961
EL++ E+LG +E L MMKDQFANYVVQK+ E + Q+ ++L+RI+ H LKKYT
Sbjct: 878 ELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQRELILTRIKVHLTALKKYT 937
Query: 962 YGKHIVARFEMLI 974
YGKH+VAR E L+
Sbjct: 938 YGKHVVARIEKLV 950
>sp|Q9ZW02|PUM3_ARATH Pumilio homolog 3 OS=Arabidopsis thaliana GN=APUM3 PE=1 SV=1
Length = 964
Score = 487 bits (1254), Expect = e-136, Method: Compositional matrix adjust.
Identities = 239/422 (56%), Positives = 298/422 (70%), Gaps = 20/422 (4%)
Query: 570 PYHMGNP--------PNMGM-FVYPSSPLASPALPGSPVVG-TGLLGGRNEMRFSPVSNR 619
PY G+P P G YP SPLA +P S + + + G MR+ +
Sbjct: 528 PYKSGSPNSHSYYGSPTFGSNMSYPGSPLAHHGMPNSLMSPYSPMRRGEVNMRYPAATRN 587
Query: 620 YSG-----WQGQRGFESYNDPKICNFLEELKSGKGRRFELSDITGHIVEFSADQHGSRFI 674
Y+G W S ++ + LEE KS K R FELS+I GH+VEFS+DQ+GSRFI
Sbjct: 588 YTGGVMGSWHMD---ASLDEGFGSSMLEEFKSNKTRGFELSEIAGHVVEFSSDQYGSRFI 644
Query: 675 QQKLENCSVDEKASVFKEILPHASKLMTDVFGNYVIQKFFEYGSPAQRKELANQLVGQIL 734
QQKLE + DEK V++EI+P A LMTDVFGNYVIQKFFE+G P QR+EL +L+ +L
Sbjct: 645 QQKLETATTDEKNMVYEEIMPKALALMTDVFGNYVIQKFFEHGLPPQRRELGEKLIDNVL 704
Query: 735 PLSMQMYGCRVIQKALETIEIEQKAQLVRELDGQVMRCVRDQNGNHVIQKCIECIPPEKI 794
PLS+QMYGCRVIQKA+E ++++QK Q+V+ELDG VMRCVRDQNGNHV+QKCIEC+P E I
Sbjct: 705 PLSLQMYGCRVIQKAIEVVDLDQKIQMVKELDGHVMRCVRDQNGNHVVQKCIECVPEENI 764
Query: 795 GFIISAFCGQVAALSMHPYGCRVIQRVLEHCADKHQCQFIVDEILDNVCALAQDQYGNYV 854
FIIS F G V LS HPYGCRVIQRVLEHC + +++EIL V L QDQYGNYV
Sbjct: 765 EFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHNPDTQSKVMEEILSTVSMLTQDQYGNYV 824
Query: 855 TQHVLQRGKPLERSKIIRKLSGHIVQLSQHKFASNVIEKCLAYGGPAERELIIEEILGHN 914
QHVL+ GKP ER+ II++L+G IVQ+SQ KFASNV+EKCL +GGP EREL++ E+LG
Sbjct: 825 VQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNVVEKCLTFGGPEERELLVNEMLGTT 884
Query: 915 EET--LLTMMKDQFANYVVQKIFELSSESQQAMMLSRIRTHAHVLKKYTYGKHIVARFEM 972
+E L MMKDQFANYVVQK+ E + Q+ ++L+RI+ H + LKKYTYGKHIVAR E
Sbjct: 885 DENEPLQAMMKDQFANYVVQKVLETCDDQQRELILTRIKVHLNALKKYTYGKHIVARVEK 944
Query: 973 LI 974
L+
Sbjct: 945 LV 946
>sp|Q9SS47|PUM4_ARATH Pumilio homolog 4 OS=Arabidopsis thaliana GN=APUM4 PE=1 SV=2
Length = 1003
Score = 469 bits (1207), Expect = e-131, Method: Compositional matrix adjust.
Identities = 214/339 (63%), Positives = 268/339 (79%), Gaps = 2/339 (0%)
Query: 638 CNFLEELKSGKGRRFELSDITGHIVEFSADQHGSRFIQQKLENCSVDEKASVFKEILPHA 697
+ LE K+ K R ELS+I GH++EFS DQ+GSRFIQQKLE + +EK ++F EILP+
Sbjct: 646 ASLLEGFKNNKTRSLELSEIVGHVIEFSMDQYGSRFIQQKLETATDEEKNAIFPEILPYG 705
Query: 698 SKLMTDVFGNYVIQKFFEYGSPAQRKELANQLVGQILPLSMQMYGCRVIQKALETIEIEQ 757
LMTDVFGNYVIQKFFE+G+ QRKELA Q+ G +L LS+QMYGCRVIQKALE +E+EQ
Sbjct: 706 RTLMTDVFGNYVIQKFFEHGTTKQRKELAEQVTGHVLALSLQMYGCRVIQKALEVVELEQ 765
Query: 758 KAQLVRELDGQVMRCVRDQNGNHVIQKCIECIPPEKIGFIISAFCGQVAALSMHPYGCRV 817
+A++V+ELDG VM+CV DQNGNHVIQKCIE +P + I FIIS+F G+V ALS HPYGCRV
Sbjct: 766 QARMVKELDGSVMKCVHDQNGNHVIQKCIERLPQDWIQFIISSFYGKVLALSTHPYGCRV 825
Query: 818 IQRVLEHCADKHQCQFIVDEILDNVCALAQDQYGNYVTQHVLQRGKPLERSKIIRKLSGH 877
IQRVLEH D + I++EI+D+VC LAQDQYGNYV QH++Q GKP ERS+II KL+G
Sbjct: 826 IQRVLEHIDDIETQRIIMEEIMDSVCTLAQDQYGNYVIQHIIQHGKPHERSEIINKLAGQ 885
Query: 878 IVQLSQHKFASNVIEKCLAYGGPAERELIIEEILGHNEET--LLTMMKDQFANYVVQKIF 935
IV++SQ KFASNV+EKCL +GGP ER++++ E+LG+ +E L MMKD F NYVVQK+
Sbjct: 886 IVKMSQQKFASNVVEKCLTFGGPEERQVLVNEMLGYTDENEPLQAMMKDPFGNYVVQKVL 945
Query: 936 ELSSESQQAMMLSRIRTHAHVLKKYTYGKHIVARFEMLI 974
E + A++LSRI+ H + LK+YTYGKHIVAR E LI
Sbjct: 946 ETCDDQSLALILSRIKVHLNALKRYTYGKHIVARVEKLI 984
Score = 56.6 bits (135), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 8/119 (6%)
Query: 861 RGKPLERSKIIRKLSGHIVQLSQHKFASNVIEKCLAYGGPAERELIIEEILGHNEETLLT 920
+ + LE S+I+ GH+++ S ++ S I++ L E+ I EIL + T
Sbjct: 656 KTRSLELSEIV----GHVIEFSMDQYGSRFIQQKLETATDEEKNAIFPEILPYGR----T 707
Query: 921 MMKDQFANYVVQKIFELSSESQQAMMLSRIRTHAHVLKKYTYGKHIVARFEMLIGEENQ 979
+M D F NYV+QK FE + Q+ + ++ H L YG ++ + ++ E Q
Sbjct: 708 LMTDVFGNYVIQKFFEHGTTKQRKELAEQVTGHVLALSLQMYGCRVIQKALEVVELEQQ 766
Score = 40.8 bits (94), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 15/89 (16%)
Query: 41 QKGCDVHGSVQRAVPNRSGSAPPNMEGSFLAIENLIARKSSSSGVNLANFNGNIRNSE-- 98
++ DVH RSGSAPP +EG A++N ++S ++ N + +I S
Sbjct: 50 ERDIDVH---------RSGSAPPTVEGLLRAMDNQYLNNNNSDHRDVGNIS-SITTSNGV 99
Query: 99 ---SEERLQANQTCLKYYGSNVNLNPRLP 124
S++ L+ + L YY SN + NPRLP
Sbjct: 100 ELLSDDELRWHPEYLSYYYSNEHSNPRLP 128
>sp|Q80U58|PUM2_MOUSE Pumilio homolog 2 OS=Mus musculus GN=Pum2 PE=1 SV=2
Length = 1066
Score = 407 bits (1047), Expect = e-112, Method: Compositional matrix adjust.
Identities = 188/337 (55%), Positives = 253/337 (75%), Gaps = 6/337 (1%)
Query: 640 FLEELKSGKGRRFELSDITGHIVEFSADQHGSRFIQQKLENCSVDEKASVFKEILPHASK 699
LE+ ++ + +L D+ GHIVEFS DQHGSRFIQQKLE + E+ VF EIL A +
Sbjct: 710 LLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQIVFNEILQAAYQ 769
Query: 700 LMTDVFGNYVIQKFFEYGSPAQRKELANQLVGQILPLSMQMYGCRVIQKALETIEIEQK- 758
LMTDVFGNYVIQKFFE+GS Q+ LA ++ G +LPL++QMYGCRVIQKALE+I +Q+
Sbjct: 770 LMTDVFGNYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQV 829
Query: 759 -AQLVRELDGQVMRCVRDQNGNHVIQKCIECIPPEKIGFIISAFCGQVAALSMHPYGCRV 817
+++V+ELDG V++CV+DQNGNHV+QKCIEC+ P+ + FII AF GQV LS HPYGCRV
Sbjct: 830 ISEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRV 889
Query: 818 IQRVLEHCADKHQCQFIVDEILDNVCALAQDQYGNYVTQHVLQRGKPLERSKIIRKLSGH 877
IQR+LEHC Q I++E+ + L QDQYGNYV QHVL+ G+P ++SKI+ ++ G
Sbjct: 890 IQRILEHCT-AEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGK 948
Query: 878 IVQLSQHKFASNVIEKCLAYGGPAERELIIEEILGHNE---ETLLTMMKDQFANYVVQKI 934
++ LSQHKFASNV+EKC+ + AER L+I+E+ N+ L TMMKDQ+ANYVVQK+
Sbjct: 949 VLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKM 1008
Query: 935 FELSSESQQAMMLSRIRTHAHVLKKYTYGKHIVARFE 971
+++ +Q+ +++ +IR H L+KYTYGKHI+A+ E
Sbjct: 1009 IDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLE 1045
Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 57/110 (51%), Gaps = 4/110 (3%)
Query: 871 IRKLSGHIVQLSQHKFASNVIEKCLAYGGPAERELIIEEILGHNEETLLTMMKDQFANYV 930
+R L GHIV+ SQ + S I++ L PAER+++ EIL + +M D F NYV
Sbjct: 724 LRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQIVFNEIL----QAAYQLMTDVFGNYV 779
Query: 931 VQKIFELSSESQQAMMLSRIRTHAHVLKKYTYGKHIVARFEMLIGEENQT 980
+QK FE S Q+ + +RIR H L YG ++ + I + Q
Sbjct: 780 IQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQV 829
>sp|Q8TB72|PUM2_HUMAN Pumilio homolog 2 OS=Homo sapiens GN=PUM2 PE=1 SV=2
Length = 1066
Score = 407 bits (1045), Expect = e-112, Method: Compositional matrix adjust.
Identities = 188/337 (55%), Positives = 253/337 (75%), Gaps = 6/337 (1%)
Query: 640 FLEELKSGKGRRFELSDITGHIVEFSADQHGSRFIQQKLENCSVDEKASVFKEILPHASK 699
LE+ ++ + +L D+ GHIVEFS DQHGSRFIQQKLE + E+ VF EIL A +
Sbjct: 710 LLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQ 769
Query: 700 LMTDVFGNYVIQKFFEYGSPAQRKELANQLVGQILPLSMQMYGCRVIQKALETIEIEQK- 758
LMTDVFGNYVIQKFFE+GS Q+ LA ++ G +LPL++QMYGCRVIQKALE+I +Q+
Sbjct: 770 LMTDVFGNYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQV 829
Query: 759 -AQLVRELDGQVMRCVRDQNGNHVIQKCIECIPPEKIGFIISAFCGQVAALSMHPYGCRV 817
+++V+ELDG V++CV+DQNGNHV+QKCIEC+ P+ + FII AF GQV LS HPYGCRV
Sbjct: 830 ISEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRV 889
Query: 818 IQRVLEHCADKHQCQFIVDEILDNVCALAQDQYGNYVTQHVLQRGKPLERSKIIRKLSGH 877
IQR+LEHC Q I++E+ + L QDQYGNYV QHVL+ G+P ++SKI+ ++ G
Sbjct: 890 IQRILEHCT-AEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGK 948
Query: 878 IVQLSQHKFASNVIEKCLAYGGPAERELIIEEILGHNE---ETLLTMMKDQFANYVVQKI 934
++ LSQHKFASNV+EKC+ + AER L+I+E+ N+ L TMMKDQ+ANYVVQK+
Sbjct: 949 VLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKM 1008
Query: 935 FELSSESQQAMMLSRIRTHAHVLKKYTYGKHIVARFE 971
+++ +Q+ +++ +IR H L+KYTYGKHI+A+ E
Sbjct: 1009 IDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLE 1045
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 67/152 (44%), Gaps = 6/152 (3%)
Query: 820 RVLEHCADKHQCQFIVDEILDNVCALAQDQYGNYVTQHVLQRGKPLERSKIIRKLSGHIV 879
R+LE + + +++ ++ +QDQ+G+ Q L+R P ER + ++
Sbjct: 709 RLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAY 768
Query: 880 QLSQHKFASNVIEKCLAYGGPAERELIIEEILGHNEETLLTMMKDQFANYVVQKIFELSS 939
QL F + VI+K +G ++ + I GH +L + + V+QK E S
Sbjct: 769 QLMTDVFGNYVIQKFFEFGSLDQKLALATRIRGH----VLPLALQMYGCRVIQKALESIS 824
Query: 940 ESQQAMMLSRIRTHAHVLK--KYTYGKHIVAR 969
QQ + HVLK K G H+V +
Sbjct: 825 SDQQVISEMVKELDGHVLKCVKDQNGNHVVQK 856
>sp|P25822|PUM_DROME Maternal protein pumilio OS=Drosophila melanogaster GN=pum PE=1 SV=2
Length = 1533
Score = 403 bits (1035), Expect = e-111, Method: Compositional matrix adjust.
Identities = 187/337 (55%), Positives = 244/337 (72%), Gaps = 1/337 (0%)
Query: 635 PKICNFLEELKSGKGRRFELSDITGHIVEFSADQHGSRFIQQKLENCSVDEKASVFKEIL 694
P LE+ ++ + +L D+ HIVEFS DQHGSRFIQQKLE + EK VF EIL
Sbjct: 1090 PGRSRLLEDFRNQRYPNLQLRDLANHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEIL 1149
Query: 695 PHASKLMTDVFGNYVIQKFFEYGSPAQRKELANQLVGQILPLSMQMYGCRVIQKALETIE 754
A LMTDVFGNYVIQKFFE+G+P Q+ L Q+ G +L L++QMYGCRVIQKALE+I
Sbjct: 1150 AAAYSLMTDVFGNYVIQKFFEFGTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESIS 1209
Query: 755 IEQKAQLVRELDGQVMRCVRDQNGNHVIQKCIECIPPEKIGFIISAFCGQVAALSMHPYG 814
EQ+ ++V ELDG V++CV+DQNGNHV+QKCIEC+ P + FII+AF GQV +LS HPYG
Sbjct: 1210 PEQQQEIVHELDGHVLKCVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYG 1269
Query: 815 CRVIQRVLEHCADKHQCQFIVDEILDNVCALAQDQYGNYVTQHVLQRGKPLERSKIIRKL 874
CRVIQR+LEHC + Q I+DE+ ++ L QDQYGNYV QHVL+ GK ++S +I +
Sbjct: 1270 CRVIQRILEHCTAE-QTTPILDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSV 1328
Query: 875 SGHIVQLSQHKFASNVIEKCLAYGGPAERELIIEEILGHNEETLLTMMKDQFANYVVQKI 934
G ++ LSQHKFASNV+EKC+ + ER +I+E+ N+ L MMKDQ+ANYVVQK+
Sbjct: 1329 RGKVLVLSQHKFASNVVEKCVTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKM 1388
Query: 935 FELSSESQQAMMLSRIRTHAHVLKKYTYGKHIVARFE 971
++S +Q ++++IR H L+KYTYGKHI A+ E
Sbjct: 1389 IDVSEPTQLKKLMTKIRPHMAALRKYTYGKHINAKLE 1425
Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 4/109 (3%)
Query: 871 IRKLSGHIVQLSQHKFASNVIEKCLAYGGPAERELIIEEILGHNEETLLTMMKDQFANYV 930
+R L+ HIV+ SQ + S I++ L AE++++ EIL ++M D F NYV
Sbjct: 1109 LRDLANHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILA----AAYSLMTDVFGNYV 1164
Query: 931 VQKIFELSSESQQAMMLSRIRTHAHVLKKYTYGKHIVARFEMLIGEENQ 979
+QK FE + Q+ + +++ H L YG ++ + I E Q
Sbjct: 1165 IQKFFEFGTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQ 1213
>sp|Q5R5X3|PUM1_PONAB Pumilio homolog 1 OS=Pongo abelii GN=PUM1 PE=2 SV=1
Length = 1186
Score = 396 bits (1018), Expect = e-109, Method: Compositional matrix adjust.
Identities = 184/335 (54%), Positives = 248/335 (74%), Gaps = 4/335 (1%)
Query: 640 FLEELKSGKGRRFELSDITGHIVEFSADQHGSRFIQQKLENCSVDEKASVFKEILPHASK 699
LE+ ++ + +L +I GHI+EFS DQHGSRFIQ KLE + E+ VF EIL A +
Sbjct: 832 LLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQ 891
Query: 700 LMTDVFGNYVIQKFFEYGSPAQRKELANQLVGQILPLSMQMYGCRVIQKALETIEIEQKA 759
LM DVFGNYVIQKFFE+GS Q+ LA ++ G +L L++QMYGCRVIQKALE I +Q+
Sbjct: 892 LMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQN 951
Query: 760 QLVRELDGQVMRCVRDQNGNHVIQKCIECIPPEKIGFIISAFCGQVAALSMHPYGCRVIQ 819
++VRELDG V++CV+DQNGNHV+QKCIEC+ P+ + FII AF GQV ALS HPYGCRVIQ
Sbjct: 952 EMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQ 1011
Query: 820 RVLEHCADKHQCQFIVDEILDNVCALAQDQYGNYVTQHVLQRGKPLERSKIIRKLSGHIV 879
R+LEHC Q I++E+ + L QDQYGNYV QHVL+ G+P ++SKI+ ++ G+++
Sbjct: 1012 RILEHCL-PDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1070
Query: 880 QLSQHKFASNVIEKCLAYGGPAERELIIEEILGHNE---ETLLTMMKDQFANYVVQKIFE 936
LSQHKFASNV+EKC+ + ER ++I+E+ N+ L TMMKDQ+ANYVVQK+ +
Sbjct: 1071 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1130
Query: 937 LSSESQQAMMLSRIRTHAHVLKKYTYGKHIVARFE 971
++ Q+ +++ +IR H L+KYTYGKHI+A+ E
Sbjct: 1131 VAEPGQRKIVMHKIRPHIATLRKYTYGKHILAKLE 1165
Score = 73.6 bits (179), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 4/109 (3%)
Query: 871 IRKLSGHIVQLSQHKFASNVIEKCLAYGGPAERELIIEEILGHNEETLLTMMKDQFANYV 930
+R+++GHI++ SQ + S I+ L PAER+L+ EIL + +M D F NYV
Sbjct: 846 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEIL----QAAYQLMVDVFGNYV 901
Query: 931 VQKIFELSSESQQAMMLSRIRTHAHVLKKYTYGKHIVARFEMLIGEENQ 979
+QK FE S Q+ + RIR H L YG ++ + I + Q
Sbjct: 902 IQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQ 950
>sp|Q14671|PUM1_HUMAN Pumilio homolog 1 OS=Homo sapiens GN=PUM1 PE=1 SV=3
Length = 1186
Score = 396 bits (1018), Expect = e-109, Method: Compositional matrix adjust.
Identities = 184/335 (54%), Positives = 248/335 (74%), Gaps = 4/335 (1%)
Query: 640 FLEELKSGKGRRFELSDITGHIVEFSADQHGSRFIQQKLENCSVDEKASVFKEILPHASK 699
LE+ ++ + +L +I GHI+EFS DQHGSRFIQ KLE + E+ VF EIL A +
Sbjct: 832 LLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQ 891
Query: 700 LMTDVFGNYVIQKFFEYGSPAQRKELANQLVGQILPLSMQMYGCRVIQKALETIEIEQKA 759
LM DVFGNYVIQKFFE+GS Q+ LA ++ G +L L++QMYGCRVIQKALE I +Q+
Sbjct: 892 LMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQN 951
Query: 760 QLVRELDGQVMRCVRDQNGNHVIQKCIECIPPEKIGFIISAFCGQVAALSMHPYGCRVIQ 819
++VRELDG V++CV+DQNGNHV+QKCIEC+ P+ + FII AF GQV ALS HPYGCRVIQ
Sbjct: 952 EMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQ 1011
Query: 820 RVLEHCADKHQCQFIVDEILDNVCALAQDQYGNYVTQHVLQRGKPLERSKIIRKLSGHIV 879
R+LEHC Q I++E+ + L QDQYGNYV QHVL+ G+P ++SKI+ ++ G+++
Sbjct: 1012 RILEHCL-PDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1070
Query: 880 QLSQHKFASNVIEKCLAYGGPAERELIIEEILGHNE---ETLLTMMKDQFANYVVQKIFE 936
LSQHKFASNV+EKC+ + ER ++I+E+ N+ L TMMKDQ+ANYVVQK+ +
Sbjct: 1071 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1130
Query: 937 LSSESQQAMMLSRIRTHAHVLKKYTYGKHIVARFE 971
++ Q+ +++ +IR H L+KYTYGKHI+A+ E
Sbjct: 1131 VAEPGQRKIVMHKIRPHIATLRKYTYGKHILAKLE 1165
Score = 73.6 bits (179), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 4/109 (3%)
Query: 871 IRKLSGHIVQLSQHKFASNVIEKCLAYGGPAERELIIEEILGHNEETLLTMMKDQFANYV 930
+R+++GHI++ SQ + S I+ L PAER+L+ EIL + +M D F NYV
Sbjct: 846 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEIL----QAAYQLMVDVFGNYV 901
Query: 931 VQKIFELSSESQQAMMLSRIRTHAHVLKKYTYGKHIVARFEMLIGEENQ 979
+QK FE S Q+ + RIR H L YG ++ + I + Q
Sbjct: 902 IQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQ 950
>sp|Q2VB19|PUM1_CHICK Pumilio homolog 1 OS=Gallus gallus GN=PUM1 PE=2 SV=1
Length = 1189
Score = 394 bits (1012), Expect = e-108, Method: Compositional matrix adjust.
Identities = 184/337 (54%), Positives = 250/337 (74%), Gaps = 6/337 (1%)
Query: 640 FLEELKSGKGRRFELSDITGHIVEFSADQHGSRFIQQKLENCSVDEKASVFKEILPHASK 699
LE+ ++ + +L +I GHI+EFS DQHGSRFIQ KLE + E+ VF EIL A +
Sbjct: 833 LLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQ 892
Query: 700 LMTDVFGNYVIQKFFEYGSPAQRKELANQLVGQILPLSMQMYGCRVIQKALETIEIEQKA 759
LM DVFGNYVIQKFFE+GS Q+ LA ++ G +L L++QMYGCRVIQKALE I +Q+
Sbjct: 893 LMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQV 952
Query: 760 --QLVRELDGQVMRCVRDQNGNHVIQKCIECIPPEKIGFIISAFCGQVAALSMHPYGCRV 817
++VRELDG V++CV+DQNGNHV+QKCIEC+ P+ + FII AF GQV ALS HPYGCRV
Sbjct: 953 INEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRV 1012
Query: 818 IQRVLEHCADKHQCQFIVDEILDNVCALAQDQYGNYVTQHVLQRGKPLERSKIIRKLSGH 877
IQR+LEHC + Q I++E+ + L QDQYGNYV QHVL+ G+P ++SKI+ ++ G+
Sbjct: 1013 IQRILEHCLPE-QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGN 1071
Query: 878 IVQLSQHKFASNVIEKCLAYGGPAERELIIEEILGHNE---ETLLTMMKDQFANYVVQKI 934
++ LSQHKFASNV+EKC+ + ER ++I+E+ N+ L TMMKDQ+ANYVVQK+
Sbjct: 1072 VLVLSQHKFASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKM 1131
Query: 935 FELSSESQQAMMLSRIRTHAHVLKKYTYGKHIVARFE 971
+++ +Q+ +++ +IR H L+KYTYGKHI+A+ E
Sbjct: 1132 IDVAEPAQRKIVMHKIRPHIATLRKYTYGKHILAKLE 1168
Score = 73.6 bits (179), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 57/110 (51%), Gaps = 4/110 (3%)
Query: 871 IRKLSGHIVQLSQHKFASNVIEKCLAYGGPAERELIIEEILGHNEETLLTMMKDQFANYV 930
+R+++GHI++ SQ + S I+ L PAER+L+ EIL + +M D F NYV
Sbjct: 847 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEIL----QAAYQLMVDVFGNYV 902
Query: 931 VQKIFELSSESQQAMMLSRIRTHAHVLKKYTYGKHIVARFEMLIGEENQT 980
+QK FE S Q+ + RIR H L YG ++ + I + Q
Sbjct: 903 IQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQV 952
>sp|Q80U78|PUM1_MOUSE Pumilio homolog 1 OS=Mus musculus GN=Pum1 PE=1 SV=2
Length = 1189
Score = 393 bits (1010), Expect = e-108, Method: Compositional matrix adjust.
Identities = 184/337 (54%), Positives = 248/337 (73%), Gaps = 6/337 (1%)
Query: 640 FLEELKSGKGRRFELSDITGHIVEFSADQHGSRFIQQKLENCSVDEKASVFKEILPHASK 699
LE+ ++ + +L +I GHI+EFS DQHGSRFIQ KLE + E+ VF EIL A +
Sbjct: 833 LLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQ 892
Query: 700 LMTDVFGNYVIQKFFEYGSPAQRKELANQLVGQILPLSMQMYGCRVIQKALETIEIEQKA 759
LM DVFGNYVIQKFFE+GS Q+ LA ++ G +L L++QMYGCRVIQKALE I +Q+
Sbjct: 893 LMVDVFGNYVIQKFFEFGSHEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQV 952
Query: 760 --QLVRELDGQVMRCVRDQNGNHVIQKCIECIPPEKIGFIISAFCGQVAALSMHPYGCRV 817
++VRELDG V++CV+DQNGNHV+QKCIEC+ P+ + FII AF GQV ALS HPYGCRV
Sbjct: 953 INEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRV 1012
Query: 818 IQRVLEHCADKHQCQFIVDEILDNVCALAQDQYGNYVTQHVLQRGKPLERSKIIRKLSGH 877
IQR+LEHC Q I++E+ + L QDQYGNYV QHVL+ G+P ++SKI+ ++ G+
Sbjct: 1013 IQRILEHCL-PDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGN 1071
Query: 878 IVQLSQHKFASNVIEKCLAYGGPAERELIIEEILGHNE---ETLLTMMKDQFANYVVQKI 934
++ LSQHKFASNV+EKC+ + ER ++I+E+ N+ L TMMKDQ+ANYVVQK+
Sbjct: 1072 VLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKM 1131
Query: 935 FELSSESQQAMMLSRIRTHAHVLKKYTYGKHIVARFE 971
+++ Q+ +++ +IR H L+KYTYGKHI+A+ E
Sbjct: 1132 IDVAEPGQRKIVMHKIRPHIATLRKYTYGKHILAKLE 1168
Score = 70.9 bits (172), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 4/110 (3%)
Query: 871 IRKLSGHIVQLSQHKFASNVIEKCLAYGGPAERELIIEEILGHNEETLLTMMKDQFANYV 930
+R+++GHI++ SQ + S I+ L AER+L+ EIL + +M D F NYV
Sbjct: 847 LREIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEIL----QAAYQLMVDVFGNYV 902
Query: 931 VQKIFELSSESQQAMMLSRIRTHAHVLKKYTYGKHIVARFEMLIGEENQT 980
+QK FE S Q+ + RIR H L YG ++ + I + Q
Sbjct: 903 IQKFFEFGSHEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQV 952
>sp|O94462|PUF3_SCHPO mRNA-binding protein puf3 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=puf3 PE=2 SV=4
Length = 732
Score = 350 bits (897), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 163/330 (49%), Positives = 230/330 (69%), Gaps = 6/330 (1%)
Query: 646 SGKGRRFELSDITGHIVEFSADQHGSRFIQQKLENCSVDEKASVFKEILPHAS-KLMTDV 704
+ K R FELSDI G++V FS DQHGSRFIQQKL + +E+ +VF+EI + +LM D+
Sbjct: 386 ANKQRHFELSDILGNVVLFSTDQHGSRFIQQKLATATEEEREAVFQEIASTSCLQLMMDI 445
Query: 705 FGNYVIQKFFEYGSPAQRKELANQLVGQILPLSMQMYGCRVIQKALETIEIEQKAQLVRE 764
FGNYV+QK+FE+G+ Q++ L +Q+ G + LS+QMYGCRV+QKA+E I E + QL++E
Sbjct: 446 FGNYVVQKYFEFGNEKQKQILLSQIKGHVFSLSLQMYGCRVVQKAIEYISPEHQVQLIQE 505
Query: 765 LDGQVMRCVRDQNGNHVIQKCIECIPPEKIGFIISAFCGQVAALSMHPYGCRVIQRVLEH 824
LDG V+ CV DQNGNHVIQK IECI + FI+ A Q+ LS HPYGCRVIQR +EH
Sbjct: 506 LDGHVLDCVCDQNGNHVIQKAIECIDTGHLQFILRALRPQIHVLSAHPYGCRVIQRAIEH 565
Query: 825 CADKHQCQFIVDEILDNVCALAQDQYGNYVTQHVLQRGKPLERSKIIRKLSGHIVQLSQH 884
C + + I++E+L ++ L QDQYGNYV QH+L+ G ++ I + H++ LS H
Sbjct: 566 CHSER--KLIIEELLPHILKLTQDQYGNYVVQHILRTGSESDKKYIFDLMIDHLLFLSCH 623
Query: 885 KFASNVIEKCLAYGGPAERELIIEEILGHNEE---TLLTMMKDQFANYVVQKIFELSSES 941
KFASNV+E+C++Y +R I+ +I+ E L+ MMKD++ANYV+QK+ + S E
Sbjct: 624 KFASNVVERCISYISDVDRRRILNKIISEKAENCSILMLMMKDKYANYVIQKLLDASPEE 683
Query: 942 QQAMMLSRIRTHAHVLKKYTYGKHIVARFE 971
++ +++S I H VLKK+TYGKH++ E
Sbjct: 684 ERDLLISYIYPHISVLKKFTYGKHLIMSVE 713
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 74/187 (39%), Gaps = 41/187 (21%)
Query: 820 RVLEHCADKHQCQFIVDEILDNVCALAQDQ------------------------------ 849
RVL Q F + +IL NV + DQ
Sbjct: 379 RVLYLFHANKQRHFELSDILGNVVLFSTDQHGSRFIQQKLATATEEEREAVFQEIASTSC 438
Query: 850 -------YGNYVTQHVLQRGKPLERSKIIRKLSGHIVQLSQHKFASNVIEKCLAYGGPAE 902
+GNYV Q + G ++ ++ ++ GH+ LS + V++K + Y P
Sbjct: 439 LQLMMDIFGNYVVQKYFEFGNEKQKQILLSQIKGHVFSLSLQMYGCRVVQKAIEYISPEH 498
Query: 903 RELIIEEILGHNEETLLTMMKDQFANYVVQKIFELSSESQQAMMLSRIRTHAHVLKKYTY 962
+ +I+E+ GH +L + DQ N+V+QK E +L +R HVL + Y
Sbjct: 499 QVQLIQELDGH----VLDCVCDQNGNHVIQKAIECIDTGHLQFILRALRPQIHVLSAHPY 554
Query: 963 GKHIVAR 969
G ++ R
Sbjct: 555 GCRVIQR 561
Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 3/105 (2%)
Query: 876 GHIVQLSQHKFASNVIEKCLAYGGPAERELIIEEILGHNEETLLTMMKDQFANYVVQKIF 935
G++V S + S I++ LA ERE + +EI + L +M D F NYVVQK F
Sbjct: 399 GNVVLFSTDQHGSRFIQQKLATATEEEREAVFQEIAS---TSCLQLMMDIFGNYVVQKYF 455
Query: 936 ELSSESQQAMMLSRIRTHAHVLKKYTYGKHIVARFEMLIGEENQT 980
E +E Q+ ++LS+I+ H L YG +V + I E+Q
Sbjct: 456 EFGNEKQKQILLSQIKGHVFSLSLQMYGCRVVQKAIEYISPEHQV 500
>sp|Q07807|PUF3_YEAST mRNA-binding protein PUF3 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PUF3 PE=1 SV=1
Length = 879
Score = 298 bits (763), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 150/321 (46%), Positives = 209/321 (65%), Gaps = 16/321 (4%)
Query: 654 LSDITGHIVEFSADQHGSRFIQQKLENCSVDEKASVFKEILPHASKLMTDVFGNYVIQKF 713
L DI GH +EF DQHGSRFIQ++L EK +F EI A +L DVFGNYVIQKF
Sbjct: 536 LKDIFGHSLEFCKDQHGSRFIQRELATSPASEKEVIFNEIRDDAIELSNDVFGNYVIQKF 595
Query: 714 FEYGSPAQRKELANQLVGQILPLSMQMYGCRVIQKALETIEIEQKAQLVRELDGQVMRCV 773
FE+GS Q+ L +Q G + LS+QMY CRVIQKALE I+ Q+ +LV EL V++ +
Sbjct: 596 FEFGSKIQKNTLVDQFKGNMKQLSLQMYACRVIQKALEYIDSNQRIELVLELSDSVLQMI 655
Query: 774 RDQNGNHVIQKCIECIPPEKIGFIISAFCGQVAALSMHPYGCRVIQRVLEHCADKHQCQF 833
+DQNGNHVIQK IE IP EK+ FI+S+ G + LS H YGCRVIQR+LE + + Q +
Sbjct: 656 KDQNGNHVIQKAIETIPIEKLPFILSSLTGHIYHLSTHSYGCRVIQRLLEFGSSEDQ-ES 714
Query: 834 IVDEILDNVCALAQDQYGNYVTQHVLQRGKPLERS------KIIRKLSGHIVQLSQHKFA 887
I++E+ D + L QDQYGNYV Q+VLQ+ + + +II ++ ++V+ S+HKFA
Sbjct: 715 ILNELKDFIPYLIQDQYGNYVIQYVLQQDQFTNKEMVDIKQEIIETVANNVVEYSKHKFA 774
Query: 888 SNVIEKCLAYGGPAERELIIEEILGH---------NEETLLTMMKDQFANYVVQKIFELS 938
SNV+EK + YG +++LII +IL ++ ++ M+KDQFANYV+QK+ +S
Sbjct: 775 SNVVEKSILYGSKNQKDLIISKILPRDKNHALNLEDDSPMILMIKDQFANYVIQKLVNVS 834
Query: 939 SESQQAMMLSRIRTHAHVLKK 959
+ +++ IR + L K
Sbjct: 835 EGEGKKLIVIAIRAYLDKLNK 855
Score = 87.8 bits (216), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 90/170 (52%), Gaps = 7/170 (4%)
Query: 813 YGCRVIQRVLEHCADKHQCQFIVDEILDNVCALAQDQYGNYVTQHVLQRGKPLERSKIIR 872
+G R IQR L + + + I +EI D+ L+ D +GNYV Q + G ++++ ++
Sbjct: 551 HGSRFIQRELA-TSPASEKEVIFNEIRDDAIELSNDVFGNYVIQKFFEFGSKIQKNTLVD 609
Query: 873 KLSGHIVQLSQHKFASNVIEKCLAYGGPAER-ELIIEEILGHNEETLLTMMKDQFANYVV 931
+ G++ QLS +A VI+K L Y +R EL++E +++L M+KDQ N+V+
Sbjct: 610 QFKGNMKQLSLQMYACRVIQKALEYIDSNQRIELVLEL-----SDSVLQMIKDQNGNHVI 664
Query: 932 QKIFELSSESQQAMMLSRIRTHAHVLKKYTYGKHIVARFEMLIGEENQTS 981
QK E + +LS + H + L ++YG ++ R E+Q S
Sbjct: 665 QKAIETIPIEKLPFILSSLTGHIYHLSTHSYGCRVIQRLLEFGSSEDQES 714
>sp|Q92359|YDHE_SCHPO Pumilio domain-containing protein C6G9.14 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC6G9.14 PE=4 SV=1
Length = 681
Score = 216 bits (551), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 112/313 (35%), Positives = 177/313 (56%), Gaps = 4/313 (1%)
Query: 660 HIVEFSADQHGSRFIQQKLENCSVDEKASVFKEILPHASKLMTDVFGNYVIQKFFEYGSP 719
+I+ F DQHG R++Q+ LE + +VF E P+ + LM D FGNY+ QK FE+ S
Sbjct: 347 NILSFCKDQHGCRYLQRLLEKKNQSHIDAVFAETHPYLAVLMVDAFGNYLCQKLFEHASE 406
Query: 720 AQRKELANQLVGQILPLSMQMYGCRVIQKALETIEI-EQKAQLVRELDGQVMRCVRDQNG 778
AQR + +++P+S M+G R +QK ++ + +Q + +V L V+ +D NG
Sbjct: 407 AQRSTFIQIIAPKLVPISFNMHGTRALQKIIDLVSSPDQISCIVNALRPNVVLLTKDLNG 466
Query: 779 NHVIQKCIECIPPEKIGFIISAFCGQVAALSMHPYGCRVIQRVLEHCADKHQCQFIVDEI 838
NHVIQKC+ E FI A C +S H +GC V+QR +H A Q + +V+ I
Sbjct: 467 NHVIQKCLNKFSQEDCQFIFDAICEDPLDVSTHRHGCCVVQRCFDH-ASPAQIEQLVEHI 525
Query: 839 LDNVCALAQDQYGNYVTQHVLQRGKPLERSKIIRKLSGHIVQLSQHKFASNVIEKCLAYG 898
+ + L QD +GNYV Q+VL+ P II + LS KF+SNV+EKC+ +
Sbjct: 526 VPHALTLVQDAFGNYVLQYVLELNNPNHTEAIISYFLYKVRALSTQKFSSNVMEKCIFFA 585
Query: 899 GPAERELIIEEILGHNEETLLTMMKDQFANYVVQKIFELSSESQQAMMLSRIRTHAHVLK 958
A +E +I E++ +E+ L +++D FANYV+Q + +S Q+A ++ RI+ +K
Sbjct: 586 PAAIKEKLISELM--DEKHLPKLLRDSFANYVIQTALDNASVKQRAELVERIKPLIPSIK 643
Query: 959 KYTYGKHIVARFE 971
G+ I+++ E
Sbjct: 644 NTPCGRRILSKLE 656
Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 125/271 (46%), Gaps = 5/271 (1%)
Query: 637 ICNFLEELKSGKGRRFELSDITGHIVEFSADQHGSRFIQQKLENCSV-DEKASVFKEILP 695
+C L E S R + I +V S + HG+R +Q+ ++ S D+ + + + P
Sbjct: 396 LCQKLFEHASEAQRSTFIQIIAPKLVPISFNMHGTRALQKIIDLVSSPDQISCIVNALRP 455
Query: 696 HASKLMTDVFGNYVIQKFFEYGSPAQRKELANQLVGQILPLSMQMYGCRVIQKALETIEI 755
+ L D+ GN+VIQK S + + + + L +S +GC V+Q+ +
Sbjct: 456 NVVLLTKDLNGNHVIQKCLNKFSQEDCQFIFDAICEDPLDVSTHRHGCCVVQRCFDHASP 515
Query: 756 EQKAQLVRELDGQVMRCVRDQNGNHVIQKCIECIPPEKIGFIISAFCGQVAALSMHPYGC 815
Q QLV + + V+D GN+V+Q +E P IIS F +V ALS +
Sbjct: 516 AQIEQLVEHIVPHALTLVQDAFGNYVLQYVLELNNPNHTEAIISYFLYKVRALSTQKFSS 575
Query: 816 RVIQRVLEHCADKHQCQFIVDEILD--NVCALAQDQYGNYVTQHVLQRGKPLERSKIIRK 873
V+++ + A + ++ E++D ++ L +D + NYV Q L +R++++ +
Sbjct: 576 NVMEKCI-FFAPAAIKEKLISELMDEKHLPKLLRDSFANYVIQTALDNASVKQRAELVER 634
Query: 874 LSGHIVQLSQHKFASNVIEKCLAYGGPAERE 904
+ I + ++ K L P+ +E
Sbjct: 635 IKPLIPSIKNTPCGRRILSK-LERRHPSSKE 664
Score = 38.1 bits (87), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 35/75 (46%)
Query: 907 IEEILGHNEETLLTMMKDQFANYVVQKIFELSSESQQAMMLSRIRTHAHVLKKYTYGKHI 966
I+ + L +M D F NY+ QK+FE +SE+Q++ + I + +G
Sbjct: 373 IDAVFAETHPYLAVLMVDAFGNYLCQKLFEHASEAQRSTFIQIIAPKLVPISFNMHGTRA 432
Query: 967 VARFEMLIGEENQTS 981
+ + L+ +Q S
Sbjct: 433 LQKIIDLVSSPDQIS 447
>sp|Q9LM20|PUM8_ARATH Putative pumilio homolog 8, chloroplastic OS=Arabidopsis thaliana
GN=APUM8 PE=3 SV=2
Length = 515
Score = 193 bits (490), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 109/324 (33%), Positives = 186/324 (57%), Gaps = 15/324 (4%)
Query: 653 ELSDITGHIVEFSADQHGSRFIQQKLENCSVDEKASVFKEILPHASKLMTDVFGNYVIQK 712
++S+ G++ + DQHG RF+Q E+ S + +F E++PH +LM D FGNY++QK
Sbjct: 195 KVSEFQGYVYFMAKDQHGCRFLQWIFEDGSALDALVIFSEVIPHVVELMMDPFGNYLMQK 254
Query: 713 FFEYGSPAQRKELANQLV---GQILPLSMQMYGCRVIQKALETIEIEQKAQLVRE-LDGQ 768
+ + QR ++ + GQ++ +S+ YG RV+Q+ +E+I+ ++ LV+ L
Sbjct: 255 LLDVCNEEQRTQIILMVTSEPGQLIRISLNAYGTRVVQRLVESIKTRKQISLVKSALRPG 314
Query: 769 VMRCVRDQNGNHVIQKCIECIPPEKIGFII---SAFCGQVAALSMHPYGCRVIQRVLEHC 825
+ +RD NGNHVIQ+C++C+ E FI + FC +A H +GC V+Q+ + +
Sbjct: 315 FLNLIRDLNGNHVIQRCLQCLSTEDNEFIFEDATKFCIDIAT---HRHGCCVLQKCIAY- 370
Query: 826 ADKHQCQFIVDEILDNVCALAQDQYGNYVTQHVLQRGKPLERSKIIRKLSGHIVQLSQHK 885
+ Q + +V EI N LAQD YGNY Q VL+ + ++ +L GH V+LS K
Sbjct: 371 SSGLQREKLVTEISRNSLFLAQDPYGNYAVQFVLELRDFSAIAAMLAQLKGHYVELSMQK 430
Query: 886 FASNVIEKCLAYGGPAERELIIEEILGHNEETLLTMMKDQFANYVVQKIFELSSESQQAM 945
F+S+++E+CL + P R I+ E++ +L ++D +AN+V+Q ++ S A
Sbjct: 431 FSSHMVERCLTH-CPESRPQIVRELISVPHFDIL--IQDPYANFVIQAALAVTKGSLHAT 487
Query: 946 MLSRIRTHAHVLKKYTYGKHIVAR 969
++ IR H+ +L+ Y K I +R
Sbjct: 488 LVEVIRPHS-ILRNNPYCKRIFSR 510
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 84/195 (43%), Gaps = 5/195 (2%)
Query: 631 SYNDPKICNFLEELKSGKGRRFELSDITGHIVEFSADQHGSRFIQQKLENCSVDEKASVF 690
+Y + +E +K+ K S + + D +G+ IQ+ L+ S ++ +F
Sbjct: 285 AYGTRVVQRLVESIKTRKQISLVKSALRPGFLNLIRDLNGNHVIQRCLQCLSTEDNEFIF 344
Query: 691 KEILPHASKLMTDVFGNYVIQKFFEYGSPAQRKELANQLVGQILPLSMQMYGCRVIQKAL 750
++ + T G V+QK Y S QR++L ++ L L+ YG +Q L
Sbjct: 345 EDATKFCIDIATHRHGCCVLQKCIAYSSGLQREKLVTEISRNSLFLAQDPYGNYAVQFVL 404
Query: 751 ETIEIEQKAQLVRELDGQVMRCVRDQNGNHVIQKCIECIP---PEKIGFIISAFCGQVAA 807
E + A ++ +L G + + +H++++C+ P P+ + +IS
Sbjct: 405 ELRDFSAIAAMLAQLKGHYVELSMQKFSSHMVERCLTHCPESRPQIVRELISV--PHFDI 462
Query: 808 LSMHPYGCRVIQRVL 822
L PY VIQ L
Sbjct: 463 LIQDPYANFVIQAAL 477
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 70/147 (47%), Gaps = 3/147 (2%)
Query: 835 VDEILDNVCALAQDQYGNYVTQHVLQRGKPLERSKIIRKLSGHIVQLSQHKFASNVIEKC 894
V E V +A+DQ+G Q + + G L+ I ++ H+V+L F + +++K
Sbjct: 196 VSEFQGYVYFMAKDQHGCRFLQWIFEDGSALDALVIFSEVIPHVVELMMDPFGNYLMQKL 255
Query: 895 LAYGGPAERELIIEEILGHNEETLLTMMKDQFANYVVQKIFE-LSSESQQAMMLSRIRTH 953
L +R II + + L+ + + + VVQ++ E + + Q +++ S +R
Sbjct: 256 LDVCNEEQRTQIILMVTSEPGQ-LIRISLNAYGTRVVQRLVESIKTRKQISLVKSALRPG 314
Query: 954 AHVLKKYTYGKHIVAR-FEMLIGEENQ 979
L + G H++ R + L E+N+
Sbjct: 315 FLNLIRDLNGNHVIQRCLQCLSTEDNE 341
>sp|Q9C9R6|PUM7_ARATH Putative pumilio homolog 7, chloroplastic OS=Arabidopsis thaliana
GN=APUM7 PE=3 SV=2
Length = 650
Score = 191 bits (486), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 107/325 (32%), Positives = 187/325 (57%), Gaps = 19/325 (5%)
Query: 654 LSDITGHIVEFSADQHGSRFIQQKLENCSVDEKASVFKEILPHASKLMTDVFGNYVIQKF 713
+ DI G++ + DQHG RF+Q+ + + + +F E++ H +LM D FGNY++QK
Sbjct: 331 MCDIQGYVYLMAKDQHGCRFLQRIFDEGTSVDAMIIFNEVIAHVVELMMDPFGNYLMQKL 390
Query: 714 FEYGSPAQRKEL---ANQLVGQILPLSMQMYGCRVIQKALETIEIEQKAQLVR-ELDGQV 769
+ + QR ++ A + GQ++ +S+ YG RV+Q+ +ETI ++ LV+ L
Sbjct: 391 LDVCTEEQRTQIVLVATEEPGQLIRISLNAYGTRVVQRLVETIRSGKQISLVKLALRPGF 450
Query: 770 MRCVRDQNGNHVIQKCIECIPPEKIGFIISA---FCGQVAALSMHPYGCRVIQRVLEHCA 826
+ ++D NGNHVIQ+C++C+ E FI A FC ++A H +GC V+Q+ + + +
Sbjct: 451 LDLIKDLNGNHVIQRCLQCLSTEDNKFIFDAATKFCTEIAT---HRHGCCVLQKCIAY-S 506
Query: 827 DKHQCQFIVDEILDNVCALAQDQYGNYVTQHVLQRGKPLERSKIIRKLSGHIVQLSQHKF 886
+ Q + ++ EI N LAQD +GNY Q V++ P + ++ +L GH VQLS KF
Sbjct: 507 MRQQREKLIAEISRNSLLLAQDPFGNYAVQFVIELRIPSAVAMMLAQLKGHYVQLSMQKF 566
Query: 887 ASNVIEKCLAYGGPAERELIIEEILG--HNEETLLTMMKDQFANYVVQKIFELSSESQQA 944
+S+++E+CL + P R I+ E++ H ++ +++D +AN+V+Q + A
Sbjct: 567 SSHMVERCLMH-CPESRPQIVRELVSVPHFDQ----LLQDPYANFVIQAALAATKGPLHA 621
Query: 945 MMLSRIRTHAHVLKKYTYGKHIVAR 969
++ IR H+ +L+ Y K I +R
Sbjct: 622 SLVEVIRPHS-ILRNNPYCKRIFSR 645
Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 113/242 (46%), Gaps = 9/242 (3%)
Query: 659 GHIVEFSADQHGSRFIQQKLENCSVDEKASVFKEIL-PHASKLMTDVFGNYVIQKFFEYG 717
G ++ S + +G+R +Q+ +E ++ S+ K L P L+ D+ GN+VIQ+ +
Sbjct: 411 GQLIRISLNAYGTRVVQRLVETIRSGKQISLVKLALRPGFLDLIKDLNGNHVIQRCLQCL 470
Query: 718 SPAQRKELANQLVGQILPLSMQMYGCRVIQKALETIEIEQKAQLVRELDGQVMRCVRDQN 777
S K + + ++ +GC V+QK + +Q+ +L+ E+ + +D
Sbjct: 471 STEDNKFIFDAATKFCTEIATHRHGCCVLQKCIAYSMRQQREKLIAEISRNSLLLAQDPF 530
Query: 778 GNHVIQKCIECIPPEKIGFIISAFCGQVAALSMHPYGCRVIQRVLEHCADKHQCQFIVDE 837
GN+ +Q IE P + +++ G LSM + +++R L HC + IV E
Sbjct: 531 GNYAVQFVIELRIPSAVAMMLAQLKGHYVQLSMQKFSSHMVERCLMHCPESRPQ--IVRE 588
Query: 838 ILD--NVCALAQDQYGNYVTQHVLQRGKPLERSKIIRKLSGHIV----QLSQHKFASNVI 891
++ + L QD Y N+V Q L K + ++ + H + + F+ N++
Sbjct: 589 LVSVPHFDQLLQDPYANFVIQAALAATKGPLHASLVEVIRPHSILRNNPYCKRIFSRNLL 648
Query: 892 EK 893
+K
Sbjct: 649 KK 650
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 3/143 (2%)
Query: 646 SGKGRRFELSDITGHIVEFSADQHGSRFIQQKLENCSVDEKASVFKEILPHASKLMTDVF 705
S + +F T E + +HG +Q+ + ++ + EI ++ L D F
Sbjct: 471 STEDNKFIFDAATKFCTEIATHRHGCCVLQKCIAYSMRQQREKLIAEISRNSLLLAQDPF 530
Query: 706 GNYVIQKFFEYGSPAQRKELANQLVGQILPLSMQMYGCRVIQKALETIEIEQKAQLVREL 765
GNY +Q E P+ + QL G + LSMQ + ++++ L E + Q+VREL
Sbjct: 531 GNYAVQFVIELRIPSAVAMMLAQLKGHYVQLSMQKFSSHMVERCLMHCP-ESRPQIVREL 589
Query: 766 DG--QVMRCVRDQNGNHVIQKCI 786
+ ++D N VIQ +
Sbjct: 590 VSVPHFDQLLQDPYANFVIQAAL 612
Score = 39.7 bits (91), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 640 FLEELKSGKGRRFELSDITGHIVEFSADQHGSRFIQQKLENCSVDEKASVFKEI--LPHA 697
F+ EL+ L+ + GH V+ S + S +++ L +C + + + +E+ +PH
Sbjct: 537 FVIELRIPSAVAMMLAQLKGHYVQLSMQKFSSHMVERCLMHCP-ESRPQIVRELVSVPHF 595
Query: 698 SKLMTDVFGNYVIQ 711
+L+ D + N+VIQ
Sbjct: 596 DQLLQDPYANFVIQ 609
>sp|P25339|PUF4_YEAST Pumilio homology domain family member 4 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=PUF4 PE=1 SV=2
Length = 888
Score = 182 bits (463), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 110/329 (33%), Positives = 173/329 (52%), Gaps = 13/329 (3%)
Query: 654 LSDITGHIVEFSADQHGSRFIQQKLENCSVDEKASVFKEILPHASKLMTDVFGNYVIQKF 713
L G I DQHG RF+Q++L+ ++F+E + +LMTD FGNY+IQK
Sbjct: 561 LDQYIGSIHSLCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQKL 620
Query: 714 FEYGSPAQRKELANQLVGQILPLSMQMYGCRVIQKALETIEIEQKAQLVRE-LDGQVMRC 772
E + QR L + +S+ +G R +QK +E I+ +++AQ+V + L ++
Sbjct: 621 LEEVTTEQRIVLTKISSPHFVEISLNPHGTRALQKLIECIKTDEEAQIVVDSLRPYTVQL 680
Query: 773 VRDQNGNHVIQKCIECIPPEKIGFIISAFCGQVAALSMHPYGCRVIQRVLEHCADKHQCQ 832
+D NGNHVIQKC++ + PE FI A ++ H +GC V+QR L+H QC
Sbjct: 681 SKDLNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDH-GTTEQCD 739
Query: 833 FIVDEILDNVCALAQDQYGNYVTQHVL----QRGKPLERSKIIRKLSGHIVQLSQHKFAS 888
+ D++L V L D +GNYV Q+++ ++ K KI+ L ++LS HKF S
Sbjct: 740 NLCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPRAIELSIHKFGS 799
Query: 889 NVIEKCLAYGGPAERELIIEEILGHNEET-LLTMMKDQFANYVVQKIFELSSESQQAMM- 946
NVIEK L E +I EIL + ET + +++ D + NYV+Q ++S + +
Sbjct: 800 NVIEKILKTA--IVSEPMILEILNNGGETGIQSLLNDSYGNYVLQTALDISHKQNDYLYK 857
Query: 947 -LSRIRTHAHV--LKKYTYGKHIVARFEM 972
LS I V ++ +GK I+ +
Sbjct: 858 RLSEIVAPLLVGPIRNTPHGKRIIGMLHL 886
>sp|Q09829|YAD3_SCHPO Pumilio domain-containing protein C4G8.03c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC4G8.03c PE=4 SV=1
Length = 780
Score = 182 bits (463), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 106/317 (33%), Positives = 174/317 (54%), Gaps = 12/317 (3%)
Query: 659 GHIVEFSADQHGSRFIQQKLENCSVDEKASVFKEILPHASKLMTDVFGNYVIQKFFEYGS 718
GH+ DQ+G R++Q+ L+ + F EI +LM D FGNY+ QK F Y S
Sbjct: 465 GHLSTICKDQYGCRYLQKLLDENPKVNASLFFPEIRQSVVQLMIDPFGNYMCQKLFVYAS 524
Query: 719 PAQRKELANQLVGQILPLSMQMYGCRVIQKALETIEI-EQKAQLVRELDGQVMRCVRDQN 777
Q+ + N + I+ + +YG R +Q ++ + EQ + L++ + + D N
Sbjct: 525 REQKLSMLNGIGEGIVDICSNLYGTRSMQNIIDKLTSNEQISLLLKIIIPSLTTLACDNN 584
Query: 778 GNHVIQKCIECIPPEKIGFIISAFCGQVAALSMHPYGCRVIQRVLEHCADKHQCQFIVDE 837
G HV+QKCI PPEK+ + + + L+ + +GC ++QR L+ Q + +V+
Sbjct: 585 GTHVLQKCIAKFPPEKLEPLFLSMEENLITLATNRHGCCILQRCLDRTNGDIQ-ERLVNS 643
Query: 838 ILDNVCALAQDQYGNYVTQHVLQRGKPLERSKIIRKLSGHIVQLSQHKFASNVIEKCLAY 897
I+ + L Q+ YGNY+ QHVL+ +II K G+I +LS KF+SN IE+C+
Sbjct: 644 IIKSCLLLVQNAYGNYLVQHVLELNIQPYTERIIEKFFGNICKLSLQKFSSNAIEQCIRT 703
Query: 898 GGPAERELIIEEILGH-NEETLLTMMKDQFANYVVQKIFELSSESQQAMMLSRIRTHAHV 956
P+ RE +++E L N E LL D +ANYV+Q+ ++ ESQ+ ++L R+ +HV
Sbjct: 704 ASPSTREQMLQEFLSFPNIEQLL---DDCYANYVMQRFLNVADESQKFLIL---RSISHV 757
Query: 957 LKKY---TYGKHIVARF 970
+ K +G+HI+A+
Sbjct: 758 IPKIQNTRHGRHILAKL 774
Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/210 (19%), Positives = 99/210 (47%), Gaps = 4/210 (1%)
Query: 729 LVGQILPLSMQMYGCRVIQKALETIEIEQKAQLVRELDGQVMRCVRDQNGNHVIQKCIEC 788
+G + + YGCR +QK L+ + E+ V++ + D GN++ QK
Sbjct: 463 FLGHLSTICKDQYGCRYLQKLLDENPKVNASLFFPEIRQSVVQLMIDPFGNYMCQKLFVY 522
Query: 789 IPPEKIGFIISAFCGQVAALSMHPYGCRVIQRVLEHCADKHQCQFIVDEILDNVCALAQD 848
E+ +++ + + + YG R +Q +++ Q ++ I+ ++ LA D
Sbjct: 523 ASREQKLSMLNGIGEGIVDICSNLYGTRSMQNIIDKLTSNEQISLLLKIIIPSLTTLACD 582
Query: 849 QYGNYVTQHVLQRGKPLERSKIIRKLSGHIVQLSQHKFASNVIEKCLAYGGPAERELIIE 908
G +V Q + + P + + + +++ L+ ++ ++++CL +E ++
Sbjct: 583 NNGTHVLQKCIAKFPPEKLEPLFLSMEENLITLATNRHGCCILQRCLDRTNGDIQERLVN 642
Query: 909 EILGHNEETLLTMMKDQFANYVVQKIFELS 938
I+ ++ L ++++ + NY+VQ + EL+
Sbjct: 643 SII----KSCLLLVQNAYGNYLVQHVLELN 668
>sp|Q9LVC3|PUM12_ARATH Pumilio homolog 12 OS=Arabidopsis thaliana GN=APUM12 PE=2 SV=2
Length = 596
Score = 175 bits (443), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 98/319 (30%), Positives = 175/319 (54%), Gaps = 7/319 (2%)
Query: 654 LSDITGHIVEFSADQHGSRFIQQKLENCSVDEKASVFKEILPHASKLMTDVFGNYVIQKF 713
+++ G I + DQHG RF+Q+ ++ +F EI+ + S+LM D FGNY++QK
Sbjct: 275 IAEARGKIYYLAKDQHGCRFLQRIFSEKDGNDIEMIFNEIIDYISELMMDPFGNYLVQKL 334
Query: 714 FEYGSPAQRKELANQLV---GQILPLSMQMYGCRVIQKALETIEIEQKAQLV-RELDGQV 769
E + QR ++ + + G ++ +S M+G R +QK +ET + E++ ++ L +
Sbjct: 335 LEVCNEDQRMQIVHSITRKPGLLIKISCDMHGTRAVQKIVETAKREEEISIIISALKHGI 394
Query: 770 MRCVRDQNGNHVIQKCIECIPPEKIGFIISAFCGQVAALSMHPYGCRVIQRVLEHCADKH 829
+ +++ NGNHV+Q+C++ + P F+ A L+ +GC V+Q+ L + ++
Sbjct: 395 VHLIKNVNGNHVVQRCLQYLLPYCGKFLFEAAITHCVELATDRHGCCVLQKCLGY-SEGE 453
Query: 830 QCQFIVDEILDNVCALAQDQYGNYVTQHVLQRGKPLERSKIIRKLSGHIVQLSQHKFASN 889
Q Q +V EI N L+QD +GNYV Q+V + +I+ +L G+ +LS K +SN
Sbjct: 454 QKQHLVSEIASNALLLSQDPFGNYVLQYVFELQLQWATFEILEQLEGNYTELSMQKCSSN 513
Query: 890 VIEKCLAYGGPAERELIIEEILGHNEETLLTMMKDQFANYVVQKIFELSSESQQAMMLSR 949
V+EKCL R II E++ + L +M D + NYV+Q + S + A+++
Sbjct: 514 VVEKCLKLADDKHRARIIRELINYGR--LDQVMLDPYGNYVIQAALKQSKGNVHALLVDA 571
Query: 950 IRTHAHVLKKYTYGKHIVA 968
I+ + L+ YGK +++
Sbjct: 572 IKLNISSLRTNPYGKKVLS 590
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 101/215 (46%), Gaps = 9/215 (4%)
Query: 757 QKAQLVRELDGQVMRCVRDQNGNHVIQKCIECIPPEKIGFIISAFCGQVAALSMHPYGCR 816
QK + E G++ +DQ+G +Q+ I I + ++ L M P+G
Sbjct: 270 QKYNSIAEARGKIYYLAKDQHGCRFLQRIFSEKDGNDIEMIFNEIIDYISELMMDPFGNY 329
Query: 817 VIQRVLEHCADKHQCQFIVDEILDN---VCALAQDQYGNYVTQHVLQRGKPLER-SKIIR 872
++Q++LE C + + Q IV I + ++ D +G Q +++ K E S II
Sbjct: 330 LVQKLLEVCNEDQRMQ-IVHSITRKPGLLIKISCDMHGTRAVQKIVETAKREEEISIIIS 388
Query: 873 KLSGHIVQLSQHKFASNVIEKCLAYGGPAERELIIEEILGHNEETLLTMMKDQFANYVVQ 932
L IV L ++ ++V+++CL Y P + + E + H E + D+ V+Q
Sbjct: 389 ALKHGIVHLIKNVNGNHVVQRCLQYLLPYCGKFLFEAAITHCVE----LATDRHGCCVLQ 444
Query: 933 KIFELSSESQQAMMLSRIRTHAHVLKKYTYGKHIV 967
K S Q+ ++S I ++A +L + +G +++
Sbjct: 445 KCLGYSEGEQKQHLVSEIASNALLLSQDPFGNYVL 479
>sp|Q9LDW3|PUM11_ARATH Pumilio homolog 11 OS=Arabidopsis thaliana GN=APUM11 PE=3 SV=2
Length = 556
Score = 160 bits (405), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 102/323 (31%), Positives = 180/323 (55%), Gaps = 17/323 (5%)
Query: 654 LSDITGHIVEFSADQHGSRFIQQKLENCSVDEKASVFKEILPHASKLMTDVFGNYVIQKF 713
+ D G + + DQ G R +Q+ ++ + + +FKE++ + +L TD FGNY+IQK
Sbjct: 239 MVDSYGSVYLMAKDQLGCRLLQKFVDEGNFVDVMIIFKEVINNVIELGTDPFGNYLIQKL 298
Query: 714 FEYGSPAQRKELANQLV---GQILPLSMQMYGCRVIQKALETIEIEQKAQLVRE-LDGQV 769
E + QR ++ +L G ++ +S+ YG RV+QK +ET+ +++ LV+ L
Sbjct: 299 IEVCNEEQRTQILIRLTSKPGLLVKISINNYGTRVVQKLIETVTTKEQISLVKSALVPGF 358
Query: 770 MRCVRDQNGNHVIQKCIECIPPEKIGFIISA---FCGQVAALSMHPYGCRVIQRVLEHCA 826
+ R+ NGNHVI C++ P FI+ A FC ++A +GC V+QR + +
Sbjct: 359 LSLFRELNGNHVILNCLKFFSPNDNKFILEAATKFCIEIATTR---HGCCVLQRCVSYSV 415
Query: 827 DKHQCQFIVDEILDNVCALAQDQYGNYVTQHVLQRGKPLERSKIIRKLSGHIVQLSQHKF 886
+ Q + +VDEI N LAQD +GNY+ Q++++ K + ++ +L G+ V+L+ KF
Sbjct: 416 GE-QHEKLVDEISRNSLLLAQDPFGNYLVQYIIE--KKVGGVNVLFELRGNYVKLATQKF 472
Query: 887 ASNVIEKCLAYGGPAERELIIEEILGHNEETLLTMMKDQFANYVVQKIFELSSESQQAMM 946
S+V+EKCL Y P R I+ E++ + +++D +ANYV+Q + +A +
Sbjct: 473 GSHVVEKCLRY-YPESRSQIVNELV--SVLNFGYLLQDPYANYVIQCALSKTKGFVRASL 529
Query: 947 LSRIRTHAHVLKKYTYGKHIVAR 969
+ ++R + + LK Y K I ++
Sbjct: 530 VEKVRRYEN-LKMTPYCKRIFSK 551
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 80/177 (45%), Gaps = 12/177 (6%)
Query: 651 RFELSDITGHIVEFSADQHGSRFIQQKLENCSVDEKASVFKEILPHASKLMTDVFGNYVI 710
+F L T +E + +HG +Q+ + ++ + EI ++ L D FGNY++
Sbjct: 384 KFILEAATKFCIEIATTRHGCCVLQRCVSYSVGEQHEKLVDEISRNSLLLAQDPFGNYLV 443
Query: 711 QKFFEYGSPAQRKELANQLVGQILPLSMQMYGCRVIQKALETIEIEQKAQLVRELDGQVM 770
Q E + +L G + L+ Q +G V++K L E ++Q+V EL +
Sbjct: 444 QYIIE--KKVGGVNVLFELRGNYVKLATQKFGSHVVEKCLRYYP-ESRSQIVNELVSVLN 500
Query: 771 --RCVRDQNGNHVIQKCIECIPPEKIGFIISAFCGQVAA---LSMHPYGCRVIQRVL 822
++D N+VIQ C + GF+ ++ +V L M PY R+ + L
Sbjct: 501 FGYLLQDPYANYVIQ----CALSKTKGFVRASLVEKVRRYENLKMTPYCKRIFSKNL 553
>sp|O74438|MCP2_SCHPO Meiotic coiled-coil protein 2 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=mcp2 PE=4 SV=1
Length = 703
Score = 159 bits (402), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 180/336 (53%), Gaps = 14/336 (4%)
Query: 646 SGKGRRFELSDITGHIVEFSADQHGSRFIQQKLENCSVDEKASVFKEILPHASKLMTDVF 705
S + ++ + I I+ S DQ S F+QQKL+ S D K ++ I+ LM + F
Sbjct: 352 SERNAVYDWNVIIDKII-VSNDQQSSIFLQQKLKISSYDMKQNIVDSIISQIHPLMLNRF 410
Query: 706 GNYVIQKFFEYGSPAQRKELANQLVGQILPLSMQMYGCRVIQKALETIEIEQKAQLVREL 765
GN+++Q+ FE+G+ Q +++ + ++G +L L+ +GC V+QKA++ + + K ++ EL
Sbjct: 411 GNFLVQRCFEHGTAPQIRQMGSAMLGNMLKLATDPFGCHVVQKAIDNVTEDIKLAMMDEL 470
Query: 766 DGQVMRCVRDQNGNHVIQKCIEC----IPPEKIGFIISAFCGQVAALSMHPYGCRVIQRV 821
+ + HV QK E P + + +A G+ +++ G V+Q +
Sbjct: 471 FLTIDVTIMHHYACHVWQKLFETQWYEYPVNVMNRVNNALRGKWHEVAVGENGSLVVQNM 530
Query: 822 LEHCA--DKHQCQFIVDEILDNVCALAQDQYGNYVTQHVLQRGKPLERSKIIRKLSGHIV 879
E+C DK +C ++EI+ ++ +A+ Q+GN+V QH+++ G+ + ++I L V
Sbjct: 531 FENCVEKDKREC---IEEIIFHLDGIARGQWGNWVVQHMVENGQGEDLKRVIDALLNRAV 587
Query: 880 QLSQHKFASNVIEKCLAYGGPAERELIIEEI----LGHNEETLLTMMKDQFANYVVQKIF 935
+ S +FAS VIEK + G L +++I + + L+ + DQ+ NY++Q+I
Sbjct: 588 EFSIDQFASKVIEKAIKSGPKNFISLYLKQITNARVDRTRQPLIDIASDQYGNYLIQQII 647
Query: 936 ELSSESQQAMMLSRIRTHAHVLKKYTYGKHIVARFE 971
+L +++ ++++ I+ H L+ YG+ + E
Sbjct: 648 QLGQPAEKNLVITHIKKHMVSLRGSKYGQKVAYLVE 683
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 88/195 (45%), Gaps = 13/195 (6%)
Query: 657 ITGHIVEFSADQHGSRFIQQKLENCSVDEKASVFKEILPHASKLMTDVFGNYVIQKFFEY 716
+ G E + ++GS +Q ENC +K +EI+ H + +GN+V+Q E
Sbjct: 510 LRGKWHEVAVGENGSLVVQNMFENCVEKDKRECIEEIIFHLDGIARGQWGNWVVQHMVEN 569
Query: 717 GSPAQRKELANQLVGQILPLSMQMYGCRVIQKALET-----IEIEQKAQLVRELDGQ--- 768
G K + + L+ + + S+ + +VI+KA+++ I + K +D
Sbjct: 570 GQGEDLKRVIDALLNRAVEFSIDQFASKVIEKAIKSGPKNFISLYLKQITNARVDRTRQP 629
Query: 769 VMRCVRDQNGNHVIQKCIECIPPEKIGFIISAFCGQVAALSMHPYGCRVIQRVLEHCADK 828
++ DQ GN++IQ+ I+ P + +I+ + +L YG +V + +K
Sbjct: 630 LIDIASDQYGNYLIQQIIQLGQPAEKNLVITHIKKHMVSLRGSKYGQKV-----AYLVEK 684
Query: 829 HQCQFIVDEILDNVC 843
Q V +++ C
Sbjct: 685 WNSQKQVSSVINYNC 699
>sp|Q1PFN9|PUM9_ARATH Pumilio homolog 9 OS=Arabidopsis thaliana GN=APUM9 PE=2 SV=1
Length = 564
Score = 158 bits (400), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 169/315 (53%), Gaps = 19/315 (6%)
Query: 654 LSDITGHIVEFSADQHGSRFIQQKLENCSVDEKASVFKEILPHASKLMTDVFGNYVIQKF 713
+ +I G + + DQ G R +Q+ +E + E + I+ H +L D FGNY++QK
Sbjct: 247 MVEIYGSVNLMAKDQIGCRVLQKLVEEGTFHEAKVILLAIIDHVVELSMDPFGNYIVQKL 306
Query: 714 FEYGSPAQRKELANQLVG---QILPLSMQMYGCRVIQKALETIEIEQKAQLVRE-LDGQV 769
F+ QR + + L +++ + + YG RV+QK +ET++ +Q+ LV+ L
Sbjct: 307 FDVSDEEQRTLIVSVLTSNPRELIRICLNTYGTRVVQKMIETVKTKQQIALVKSGLKPGF 366
Query: 770 MRCVRDQNGNHVIQKCIECIPPEKIGFIISAFCGQVAALSMHPYGCRVIQRVLEHCADKH 829
+ V+D NGNHVIQ C++ + P F++ A A +++H +GC V+Q + +
Sbjct: 367 LALVKDLNGNHVIQSCLQTLGPNDNEFVLEAATKYCAEIAIHRHGCCVLQCCISNSVGL- 425
Query: 830 QCQFIVDEILDNVCALAQDQYGNYVTQHVLQRGKPLERSKIIRKLSGHIVQLSQHKFASN 889
Q + +V EI N L+QD +GNYV Q+++ + + K++ + H +L+ KF+S+
Sbjct: 426 QRERLVAEISRNSLHLSQDPFGNYVVQYLID--QQVSAVKLLVQFRMHYAELATQKFSSH 483
Query: 890 VIEKCLAYGGPAERELIIEEILGHNEETLLTMMKDQFANYVVQKIFELSSESQQAMMLSR 949
VIEKCL + E++ E + N E LL +D +ANYV+Q ++ +A ++++
Sbjct: 484 VIEKCLRKYPESRAEIVRELLCVPNFEYLL---QDPYANYVIQTALSVTKGPVRAKLVAK 540
Query: 950 IRTHAHVLKKYTYGK 964
+ Y YGK
Sbjct: 541 V---------YRYGK 546
Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 120/261 (45%), Gaps = 13/261 (4%)
Query: 716 YG--SPAQRKELAN--QLVGQILPLSMQMYGCRVIQKALETIEIEQKAQLVRELDGQVMR 771
YG SP +L + ++ G + ++ GCRV+QK +E + ++ + V+
Sbjct: 233 YGKMSPKSNNDLVSMVEIYGSVNLMAKDQIGCRVLQKLVEEGTFHEAKVILLAIIDHVVE 292
Query: 772 CVRDQNGNHVIQKCIECIPPEKIGFIISAFCG---QVAALSMHPYGCRVIQRVLEHCADK 828
D GN+++QK + E+ I+S ++ + ++ YG RV+Q+++E K
Sbjct: 293 LSMDPFGNYIVQKLFDVSDEEQRTLIVSVLTSNPRELIRICLNTYGTRVVQKMIETVKTK 352
Query: 829 HQCQFIVDEILDNVCALAQDQYGNYVTQHVLQRGKPLERSKIIRKLSGHIVQLSQHKFAS 888
Q + + AL +D GN+V Q LQ P + ++ + + +++ H+
Sbjct: 353 QQIALVKSGLKPGFLALVKDLNGNHVIQSCLQTLGPNDNEFVLEAATKYCAEIAIHRHGC 412
Query: 889 NVIEKCLAYGGPAERELIIEEILGHNEETLLTMMKDQFANYVVQKIFELSSESQQAMMLS 948
V++ C++ +RE ++ EI L + +D F NYVVQ + + + +L
Sbjct: 413 CVLQCCISNSVGLQRERLVAEI----SRNSLHLSQDPFGNYVVQ--YLIDQQVSAVKLLV 466
Query: 949 RIRTHAHVLKKYTYGKHIVAR 969
+ R H L + H++ +
Sbjct: 467 QFRMHYAELATQKFSSHVIEK 487
Score = 43.5 bits (101), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 62/142 (43%), Gaps = 15/142 (10%)
Query: 652 FELSDITGHIVEFSADQHGSRFIQQKLENCSVDEKASVFKEILPHASKLMTDVFGNYVIQ 711
F L T + E + +HG +Q + N ++ + EI ++ L D FGNYV+Q
Sbjct: 393 FVLEAATKYCAEIAIHRHGCCVLQCCISNSVGLQRERLVAEISRNSLHLSQDPFGNYVVQ 452
Query: 712 KFFEYGSPAQRKELANQLVGQILPLSMQMYGCRVIQKALETIEIEQKAQLVRELDGQVMR 771
+ A + L Q L+ Q + VI+K L E +A++VREL
Sbjct: 453 YLIDQQVSAVK--LLVQFRMHYAELATQKFSSHVIEKCLRKYP-ESRAEIVREL-----L 504
Query: 772 CV-------RDQNGNHVIQKCI 786
CV +D N+VIQ +
Sbjct: 505 CVPNFEYLLQDPYANYVIQTAL 526
Score = 33.5 bits (75), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 37/195 (18%), Positives = 73/195 (37%), Gaps = 3/195 (1%)
Query: 629 FESYNDPKICNFLEELKSGKGRRFELSDITGHIVEFSADQHGSRFIQQKLENCSVDEKAS 688
+Y + +E +K+ + S + + D +G+ IQ L+ ++
Sbjct: 334 LNTYGTRVVQKMIETVKTKQQIALVKSGLKPGFLALVKDLNGNHVIQSCLQTLGPNDNEF 393
Query: 689 VFKEILPHASKLMTDVFGNYVIQKFFEYGSPAQRKELANQLVGQILPLSMQMYGCRVIQK 748
V + + +++ G V+Q QR+ L ++ L LS +G V+Q
Sbjct: 394 VLEAATKYCAEIAIHRHGCCVLQCCISNSVGLQRERLVAEISRNSLHLSQDPFGNYVVQY 453
Query: 749 ALETIEIEQKAQLVRELDGQVMRCVRDQNGNHVIQKCIECIPPEKIGFIISAFC-GQVAA 807
++ + +L+ + + +HVI+KC+ P + + C
Sbjct: 454 LID--QQVSAVKLLVQFRMHYAELATQKFSSHVIEKCLRKYPESRAEIVRELLCVPNFEY 511
Query: 808 LSMHPYGCRVIQRVL 822
L PY VIQ L
Sbjct: 512 LLQDPYANYVIQTAL 526
>sp|P39016|MPT5_YEAST Suppressor protein MPT5 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=MPT5 PE=1 SV=2
Length = 859
Score = 157 bits (397), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 98/319 (30%), Positives = 167/319 (52%), Gaps = 41/319 (12%)
Query: 662 VEFSADQHGSRFIQQKLENCSVDE--KASVFKEILPHASKLMTDVFGNYVIQKFFEYGSP 719
++ + DQ G RF+Q+KLE S + ++++I P L+ D FGNY++QK +Y +
Sbjct: 216 IKLATDQFGCRFLQKKLETPSESNMVRDLMYEQIKPFFLDLILDPFGNYLVQKLCDYLTA 275
Query: 720 AQRKELANQLVGQILPLSMQMYGCRVIQKALETIEIEQKAQLV-----RELDG--QVMRC 772
Q+ L + + +S+ YG R +QK ++T++ E + L+ +E QV+
Sbjct: 276 EQKTLLIQTIYPNVFQISINQYGTRSLQKIIDTVDNEVQIDLIIKGFSQEFTSIEQVVTL 335
Query: 773 VRDQNGNHVIQKCIECIPPEKIGFIISAFCGQ--VAALSMHPYGCRVIQRVLEHCADKHQ 830
+ D NGNHVIQKCI P K GFII A Q + +S H +GC V+Q++L C +
Sbjct: 336 INDLNGNHVIQKCIFKFSPSKFGFIIDAIVEQNNIITISTHKHGCCVLQKLLSVCTLQQI 395
Query: 831 CQFIVDEILDNVCALAQDQYGNYVTQHVLQRGKPLE---RSKIIRKLSGHIVQLSQHKFA 887
+ V +I+ + L DQ+GNY+ Q +L K L+ +++ +LS + QLS KF+
Sbjct: 396 FKISV-KIVQFLPGLINDQFGNYIIQFLLDI-KELDFYLLAELFNRLSNELCQLSCLKFS 453
Query: 888 SNVIEKCLAY-------------GGPAERELII-EEILGHNEETLLT-----------MM 922
SNV+EK + GG ++R + ++++ + LLT ++
Sbjct: 454 SNVVEKFIKKLFRIITGFIVNNNGGASQRTAVASDDVINASMNILLTTIDIFTVNLNVLI 513
Query: 923 KDQFANYVVQKIFELSSES 941
+D F NY +Q + ++ + S
Sbjct: 514 RDNFGNYALQTLLDVKNYS 532
Score = 42.0 bits (97), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
Query: 659 GHIVEFSADQHGSRFIQQKLENCSVDEKASVFKEILPHASKLMTDVFGNYVIQKFFEYGS 718
+I+ S +HG +Q+ L C++ + + +I+ L+ D FGNY+IQ +
Sbjct: 368 NNIITISTHKHGCCVLQKLLSVCTLQQIFKISVKIVQFLPGLINDQFGNYIIQFLLDIKE 427
Query: 719 PA--QRKELANQLVGQILPLSMQMYGCRVIQKALETI 753
EL N+L ++ LS + V++K ++ +
Sbjct: 428 LDFYLLAELFNRLSNELCQLSCLKFSSNVVEKFIKKL 464
>sp|Q9LP21|PUM10_ARATH Putative pumilio homolog 10 OS=Arabidopsis thaliana GN=APUM10 PE=3
SV=2
Length = 528
Score = 149 bits (376), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/321 (30%), Positives = 170/321 (52%), Gaps = 13/321 (4%)
Query: 654 LSDITGHIVEFSADQHGSRFIQQKLENCSVDEKASVFKEILPHASKLMTDVFGNYVIQKF 713
+ +I G + + DQ G R +Q+ +E +V + +F EI+ H +L D GNY++QK
Sbjct: 211 MVEIYGSVNLMARDQIGCRALQKLVEEGTVLDSKVIFLEIIDHVVELSMDPLGNYIVQKL 270
Query: 714 FEYGSPAQRKELANQLVG---QILPLSMQMYGCRVIQKALETIEIEQKAQLVRE-LDGQV 769
QR + + L +++ + + G RVIQK ++T++ +Q+ LV+ L+
Sbjct: 271 LVVSDEEQRTMIVSVLTSKPRELIKICLNTNGTRVIQKMIKTVKTKQQIALVKSALEPGF 330
Query: 770 MRCVRDQNGNHVIQKCIECIPPEKIGFIISAFCGQVAALSMHPYGCRVIQRVLEHCADKH 829
+ V D NG HV+Q C+E + P F++ A A L+ H YGC V+Q L +
Sbjct: 331 LVLVNDSNGYHVLQSCLEFLVPNDNKFVVEAATEYCAQLATHQYGCYVLQCSLINTVG-L 389
Query: 830 QCQFIVDEILDNVCALAQDQYGNYVTQHVLQRGKPLERSKIIRKLSGHIVQLSQHKFASN 889
Q + +V EI + L+QD +GNYV Q ++ + + ++ H ++L+ KF+S+
Sbjct: 390 QHERLVAEISRDSLRLSQDPFGNYVVQCLID--QQVSSVNLLLPFRTHCIELATQKFSSH 447
Query: 890 VIEKCLAYGGPAERELIIEEILGH-NEETLLTMMKDQFANYVVQKIFELSSESQQAMMLS 948
VIEKCL P R I+ E+L + N E LL +D +ANYV+Q ++ + +A ++
Sbjct: 448 VIEKCLR-KYPESRAEIVRELLSYPNFEQLL---QDPYANYVIQTALSVTKGAVRARLVE 503
Query: 949 RIRTHAHVLKKYTYGKHIVAR 969
+++ L+ Y K I ++
Sbjct: 504 KVKRFGK-LQSNPYCKKIFSK 523
Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 70/145 (48%), Gaps = 3/145 (2%)
Query: 837 EILDNVCALAQDQYGNYVTQHVLQRGKPLERSKIIRKLSGHIVQLSQHKFASNVIEKCLA 896
EI +V +A+DQ G Q +++ G L+ I ++ H+V+LS + +++K L
Sbjct: 213 EIYGSVNLMARDQIGCRALQKLVEEGTVLDSKVIFLEIIDHVVELSMDPLGNYIVQKLLV 272
Query: 897 YGGPAERELIIEEILGHNEETLLTMMKDQFANYVVQKIFELSSESQQ-AMMLSRIRTHAH 955
+R +I+ +L L+ + + V+QK+ + QQ A++ S +
Sbjct: 273 VSDEEQRTMIV-SVLTSKPRELIKICLNTNGTRVIQKMIKTVKTKQQIALVKSALEPGFL 331
Query: 956 VLKKYTYGKHIV-ARFEMLIGEENQ 979
VL + G H++ + E L+ +N+
Sbjct: 332 VLVNDSNGYHVLQSCLEFLVPNDNK 356
Score = 40.4 bits (93), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 11/141 (7%)
Query: 651 RFELSDITGHIVEFSADQHGSRFIQQKLENCSVDEKASVFKEILPHASKLMTDVFGNYVI 710
+F + T + + + Q+G +Q L N + + EI + +L D FGNYV+
Sbjct: 356 KFVVEAATEYCAQLATHQYGCYVLQCSLINTVGLQHERLVAEISRDSLRLSQDPFGNYVV 415
Query: 711 QKFFEYGSPAQRKELANQLV---GQILPLSMQMYGCRVIQKALETIEIEQKAQLVRELDG 767
Q + Q+ N L+ + L+ Q + VI+K L E +A++VREL
Sbjct: 416 QCLID-----QQVSSVNLLLPFRTHCIELATQKFSSHVIEKCLRKYP-ESRAEIVRELLS 469
Query: 768 --QVMRCVRDQNGNHVIQKCI 786
+ ++D N+VIQ +
Sbjct: 470 YPNFEQLLQDPYANYVIQTAL 490
>sp|Q10238|MPF1_SCHPO Meiotic PUF family protein 1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=mpf1 PE=4 SV=1
Length = 581
Score = 141 bits (355), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 161/318 (50%), Gaps = 13/318 (4%)
Query: 664 FSADQHGSRFIQQKLENCSVDEKASVFKEILPHASKLMTDVFGNYVIQKFFEYGSPAQRK 723
F DQ S +QQ+L+N +++ ++ ILP + LM + FGN++IQK FEY + AQ +
Sbjct: 263 FQNDQAASLSLQQQLKNEDIEDNINLINTILPFSVTLMKNKFGNFLIQKCFEYSTEAQLQ 322
Query: 724 ELANQLVGQILPLSMQMYGCRVIQKALETIEIEQKAQLVRELDGQVMRCVRDQNGNHVIQ 783
+ L + LS+ +G V+QK+LE L+ EL + + ++ HV Q
Sbjct: 323 SFSYFLKKHVKELSIDAFGSHVLQKSLEIYPERFTNNLIEELIECLPATLMQRHSCHVWQ 382
Query: 784 KCIECIPPEKIGFIISAFC----GQVAALSMHPYGCRVIQRVLEHC--ADKHQCQFIVDE 837
K E + I F G+ +S+ G V+Q + E+C DK C +DE
Sbjct: 383 KFFETRRKSLVDGIFDHFNKKMQGKWLQVSVSEMGSLVVQTIFENCKEKDKRTC---LDE 439
Query: 838 ILDNVCALAQDQYGNYVTQHVLQRGKPLERSKIIRKLSGHIVQLSQHKFASNVIEKCLAY 897
I++N+ + Q+GN+V QH+++ G ++ +I+ L + S +++AS V+E+ L
Sbjct: 440 IINNMDQIICGQWGNWVIQHIIEHGSEPDKQRILNSLLKEVESYSTNRYASKVVERALRV 499
Query: 898 GGPAERELIIEEILGHNEET----LLTMMKDQFANYVVQKIFELSSESQQAMMLSRIRTH 953
+ ++EI E L + +Q+ NY+VQ + ++++ SQ +M ++ H
Sbjct: 500 CHVTFFDRYVKEITTPQNELPTIFLQEIASNQYGNYIVQYLLQVATPSQINLMAEHLKKH 559
Query: 954 AHVLKKYTYGKHIVARFE 971
L+ + YG+ I A E
Sbjct: 560 MVSLRGHKYGQRIAALVE 577
Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 79/167 (47%), Gaps = 8/167 (4%)
Query: 659 GHIVEFSADQHGSRFIQQKLENCSVDEKASVFKEILPHASKLMTDVFGNYVIQKFFEYGS 718
G ++ S + GS +Q ENC +K + EI+ + +++ +GN+VIQ E+GS
Sbjct: 406 GKWLQVSVSEMGSLVVQTIFENCKEKDKRTCLDEIINNMDQIICGQWGNWVIQHIIEHGS 465
Query: 719 PAQRKELANQLVGQILPLSMQMYGCRVIQKALETIEIEQKAQLVRELDGQ--------VM 770
++ + N L+ ++ S Y +V+++AL + + V+E+ +
Sbjct: 466 EPDKQRILNSLLKEVESYSTNRYASKVVERALRVCHVTFFDRYVKEITTPQNELPTIFLQ 525
Query: 771 RCVRDQNGNHVIQKCIECIPPEKIGFIISAFCGQVAALSMHPYGCRV 817
+Q GN+++Q ++ P +I + + +L H YG R+
Sbjct: 526 EIASNQYGNYIVQYLLQVATPSQINLMAEHLKKHMVSLRGHKYGQRI 572
Score = 38.5 bits (88), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 654 LSDITGHIVEFSADQHGSRFIQQKLENCSVDEKASVFKEI------LP--HASKLMTDVF 705
L+ + + +S +++ S+ +++ L C V KEI LP ++ ++ +
Sbjct: 473 LNSLLKEVESYSTNRYASKVVERALRVCHVTFFDRYVKEITTPQNELPTIFLQEIASNQY 532
Query: 706 GNYVIQKFFEYGSPAQRKELANQLVGQILPLSMQMYGCRV 745
GNY++Q + +P+Q +A L ++ L YG R+
Sbjct: 533 GNYIVQYLLQVATPSQINLMAEHLKKHMVSLRGHKYGQRI 572
>sp|Q9N5M6|FBF1_CAEEL Fem-3 mRNA-binding factor 1 OS=Caenorhabditis elegans GN=fbf-1 PE=1
SV=1
Length = 614
Score = 132 bits (333), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 172/332 (51%), Gaps = 41/332 (12%)
Query: 651 RFELSDI--TGHIVEFSADQHGSRFIQQKLE-NCSVDEKASVFKEILPHAS---KLMTDV 704
R LS++ +G +++F+ D+ G +F+++ ++ + + +K +F++++ KL T++
Sbjct: 180 RLSLSEVLDSGDLMKFAVDKTGCQFLEKAVKGSLTSYQKFQLFEQVIGRKDDFLKLSTNI 239
Query: 705 FGNYVIQKF-------FEYGSPAQRKELANQLVGQILPLSMQMYGCRVIQKALETIEIEQ 757
FGNY +Q+ ++ + ++++L N + Q+ + + + CRVIQ +L+ +++
Sbjct: 240 FGNYFVQEIIGMSLTTYDDDNIKRQEKLKNFISSQMTDMCLDKFACRVIQSSLQNMDLSL 299
Query: 758 KAQLVREL--DGQVMRCVRDQNGNHVIQKCIECIPPEKIGFIIS--AFCGQVAALSMHPY 813
+LV+ L D +++ DQN NHVIQK + IP + FI+ A + + Y
Sbjct: 300 ACKLVQALPRDARLIAICVDQNANHVIQKVVAVIPLKNWEFIVDFVATPEHLRQICFDKY 359
Query: 814 GCRVIQRVLEHC-AD--------------KHQCQFIVDEILDNVCALAQDQYGNYVTQHV 858
GCRV+Q ++E AD + Q ++ + + LA ++Y NY+ QH+
Sbjct: 360 GCRVVQTIIEKLTADSINVDLTSAAQHLRERALQRLMTSVTNRCQELATNEYANYIIQHI 419
Query: 859 LQRGK-PLERSKIIRK-LSGHIVQLSQHKFASNVIEKCLAYGGPAERELIIEEIL----- 911
+ + R II K L +++ LSQ KFAS+V+EK + +++EI
Sbjct: 420 VSNDDLAVYRECIIEKCLMRNLLSLSQEKFASHVVEKAFLHAPMELLAEMMDEIFDGYMP 479
Query: 912 --GHNEETLLTMMKDQFANYVVQKIFELSSES 941
G ++ L MM QF NYVVQ + + ++
Sbjct: 480 HPGTGKDALDIMMFHQFGNYVVQCMLTICCDA 511
>sp|Q09312|FBF2_CAEEL Fem-3 mRNA-binding factor 2 OS=Caenorhabditis elegans GN=fbf-2 PE=1
SV=1
Length = 632
Score = 130 bits (328), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 183/378 (48%), Gaps = 61/378 (16%)
Query: 651 RFELSDI--TGHIVEFSADQHGSRFIQQKLE-NCSVDEKASVFKEILPHAS---KLMTDV 704
R LS++ +G +++F+ D+ G +F+++ ++ + + +K +F++++ KL T++
Sbjct: 182 RLSLSEVLDSGDLMKFAVDKTGCQFLEKAVKGSLTSYQKFQLFEQVIGRKDDFLKLSTNI 241
Query: 705 FGNYVIQKFF-------EYGSPAQRKELANQLVGQILPLSMQMYGCRVIQKALETIEIEQ 757
FGNY++Q + G ++++L N + Q+ + + + CRVIQ +L+ +++
Sbjct: 242 FGNYLVQSVIGISLATNDDGYTKRQEKLKNFISSQMTDMCLDKFACRVIQSSLQNMDLSL 301
Query: 758 KAQLVREL--DGQVMRCVRDQNGNHVIQKCIECIPPEKIGFIIS--AFCGQVAALSMHPY 813
+LV+ L D +++ DQN NHVIQK + IP + FI+ A + + Y
Sbjct: 302 ACKLVQALPRDARLIAICVDQNANHVIQKVVAVIPLKNWEFIVDFVATPEHLRQICSDKY 361
Query: 814 GCRVIQRVLEHC-AD--------------KHQCQFIVDEILDNVCALAQDQYGNYVTQHV 858
GCRV+Q ++E AD + Q ++ + + LA ++Y NY+ QH+
Sbjct: 362 GCRVVQTIIEKLTADSMNVDLTSAAQNLRERALQRLMTSVTNRCQELATNEYANYIIQHI 421
Query: 859 LQRGK-PLERSKIIRK-LSGHIVQLSQHKFASNVIEKCLAYGGPAERELIIEEIL----- 911
+ + R II K L +++ LSQ KFAS+V+EK + +++EI
Sbjct: 422 VSNDDLAVYRECIIEKCLMRNLLSLSQEKFASHVVEKAFLHAPLELLAEMMDEIFDGYIP 481
Query: 912 --GHNEETLLTMMKDQFANYVVQKIFE--------------------LSSESQQAMMLSR 949
++ L MM QF NYVVQ + +S + + SR
Sbjct: 482 HPDTGKDALDIMMFHQFGNYVVQCMLTICCDAVSGRRQTKEGGYDHAISFQDWLKKLHSR 541
Query: 950 IRTHAHVLKKYTYGKHIV 967
+ H L +++ GK ++
Sbjct: 542 VTKERHRLSRFSSGKKMI 559
>sp|Q9FMH4|PUM13_ARATH Putative pumilio homolog 13 OS=Arabidopsis thaliana GN=APUM13 PE=3
SV=1
Length = 527
Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/367 (20%), Positives = 167/367 (45%), Gaps = 41/367 (11%)
Query: 621 SGWQGQRGFESYNDPKICNFLEELKSGKGRRFELSDITGHIVEFSADQHGSRFIQQKLEN 680
+ W+ G +YN + + +E +G+G F ++ D+ S+ +++ +
Sbjct: 187 NSWRSNEGC-TYNQDQAASSME---NGRGSYFSIA----------TDRVWSKELEKTIFV 232
Query: 681 CSVDEKASVFKEILPHASKLMTDVFGNYVIQKFFEYGSPAQR---KELANQLVGQILPLS 737
+ + +F ++ +LM D FGN V++ S Q ++ + + + + +
Sbjct: 233 GTKETIDMIFDGLIVGICELMVDPFGNDVVKLLIGKCSSEQIILIVDVVTRHISKFVNIC 292
Query: 738 MQMYGCRVIQKALETIEIEQKAQLVRELDG---QVMRCVRDQNGNHVIQKCIECIPP--- 791
G IQ L +I Q+ R +D ++ R+ N +VI C
Sbjct: 293 FNPIGTLAIQVLLTSIHERANNQIPRIMDAISSVALQLTRNTNAKYVILACFRMFTSSQC 352
Query: 792 EKIGFIISAFCGQVAALSMHPYGCRVIQRVLEHCADKHQC------QFIVDEILDNVCAL 845
++ ++S C Q+A + GC ++Q+ C DK + Q ++ E++++ L
Sbjct: 353 RRLLEVVSQHCYQIA---IDQNGCCLLQQ----CFDKERVPNHEIRQRLISEVIEHALKL 405
Query: 846 AQDQYGNYVTQHVLQRGKPLERSKIIRKLSGHIVQLSQHKFASNVIEKCLAYGGPAEREL 905
+ +GNYV Q+V++ E ++ KL + L+++K+ S+V++K L G + +
Sbjct: 406 CLNCHGNYVVQYVVELDNQHETDLLVNKLLRNYAHLARNKYGSHVVQKLLKLRGIDSKLI 465
Query: 906 IIEEILGHNEETLLTMMKDQFANYVVQKIFELSSESQQAMMLSRIRTHAHVLKKYTYGKH 965
+++ + G + T++ D F NYV+Q + +S E + M+ I + +++ +G
Sbjct: 466 VVDLLRG-----IDTLLLDPFGNYVIQTAWFVSKEDVRQMLRYYIERNIRLMRCNKFGNK 520
Query: 966 IVARFEM 972
I+ + +
Sbjct: 521 ILEKLNI 527
Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 108/245 (44%), Gaps = 18/245 (7%)
Query: 744 RVIQKALE-TIEIEQKAQLVRELDGQVM---RCVRDQNGNHVIQKCIECIPPEKIGFIIS 799
RV K LE TI + K + DG ++ + D GN V++ I E+I I+
Sbjct: 220 RVWSKELEKTIFVGTKETIDMIFDGLIVGICELMVDPFGNDVVKLLIGKCSSEQIILIVD 279
Query: 800 AFCGQVAA---LSMHPYGCRVIQRVLEHCADKHQCQF--IVDEILDNVCALAQDQYGNYV 854
++ + +P G IQ +L ++ Q I+D I L ++ YV
Sbjct: 280 VVTRHISKFVNICFNPIGTLAIQVLLTSIHERANNQIPRIMDAISSVALQLTRNTNAKYV 339
Query: 855 TQHVLQRGKPLERSKIIRKLSGHIVQLSQHKFASNVIEKCLAYGGPAEREL---IIEEIL 911
+ + +++ +S H Q++ + ++++C E+ +I E++
Sbjct: 340 ILACFRMFTSSQCRRLLEVVSQHCYQIAIDQNGCCLLQQCFDKERVPNHEIRQRLISEVI 399
Query: 912 GHNEETLLTMMKDQFANYVVQKIFELSSESQQAMMLSR-IRTHAHVLKKYTYGKHIVARF 970
H L + + NYVVQ + EL ++ + +++++ +R +AH L + YG H+V +
Sbjct: 400 EH----ALKLCLNCHGNYVVQYVVELDNQHETDLLVNKLLRNYAH-LARNKYGSHVVQKL 454
Query: 971 EMLIG 975
L G
Sbjct: 455 LKLRG 459
>sp|Q4PSD1|PUM14_ARATH Pumilio homolog 14 OS=Arabidopsis thaliana GN=APUM14 PE=2 SV=1
Length = 518
Score = 81.3 bits (199), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/373 (20%), Positives = 162/373 (43%), Gaps = 36/373 (9%)
Query: 614 SPVSNRYSGWQGQR-GFESYNDPKICNFLEELKSGKGRRFELSDITGHIVEFSADQHGSR 672
S +R S + R G+E YN + +G F+ + F+ D+ S
Sbjct: 168 SSSRDRVSDYYTNRFGYEGYN---------YWRGNEG--FDYNQCQASFSAFAKDKEMSE 216
Query: 673 FIQQKLENCSVDEKASVFKEILPHASKLMTDVFGNYVIQKFFEYGSPAQRKELAN---QL 729
+ + + + +++ ++ +LM D +G+ V+Q S Q +L + Q
Sbjct: 217 RLGMSIFQGTKETVDAIYNGLIGDICELMVDPYGSDVVQLLMRRCSSEQIVQLVDIVTQQ 276
Query: 730 VGQILPLSMQMYGCRVIQKALETIEIEQKAQLVRELDGQVMRCVRDQ--NGNHVIQKCIE 787
+ Q + + + G IQ L I K Q+ R +D V+R V Q NH I +
Sbjct: 277 MFQFVNICIDSLGTNAIQVLLTCINERAKDQIPRIVD--VVRTVALQLSKSNHAIFVILA 334
Query: 788 C--IPPEKIGFIISAFCGQVAALSMHPYGCRVIQRVLEHCADKHQC------QFIVDEIL 839
C + P ++ +++ +GC ++Q C +K + Q ++ E +
Sbjct: 335 CFRLFPLHCRLLLELIVQNCHQIAIDQHGCCLLQL----CFNKDRVPNLEIRQRLIMEAI 390
Query: 840 DNVCALAQDQYGNYVTQHVLQRGKPLERSKIIRKLSGHIVQLSQHKFASNVIEKCLAYGG 899
N L + YGNYV Q++++ ++R+L G+ L+++K+ S+ ++K L
Sbjct: 391 ANALRLCLNCYGNYVVQYIVELNNRYLIDALVRQLIGNYAHLARNKYGSHAVQKLLKLRW 450
Query: 900 PAERELIIEEILGHNEETLLTMMKDQFANYVVQKIFELSSESQQAMMLSRIRTHAHVLKK 959
R ++I+ + + T++ D F NYV+Q + +S + + M+ I + +++
Sbjct: 451 IDSRVIVIDLL-----REIDTLLLDPFGNYVIQTAWFVSKDDVRRMLRYHIERNIPMMRC 505
Query: 960 YTYGKHIVARFEM 972
+G ++ + +
Sbjct: 506 NKFGNKVLEKLNI 518
>sp|Q9P789|YN8E_SCHPO Pumilio domain-containing protein P35G2.14 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPBP35G2.14 PE=1 SV=2
Length = 1065
Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 118/273 (43%), Gaps = 15/273 (5%)
Query: 653 ELSDITGHIVEFSADQHGSRF-------IQQKLEN--CSVDEKASVFKEILPHASKLMTD 703
EL+D I S R ++++++N C+ +E + L S L +D
Sbjct: 725 ELTDFAAQIPSISKAFSSRRLNAPKLRQVRKRIDNGLCTQEEVEDIAINWLDEVSDLSSD 784
Query: 704 VFGNYVIQKFFEYGSPAQRKELANQLVGQILPLSMQMYGCRVIQKALETIEIEQKAQLV- 762
GN V+QK F+Y S ++ + ++ + + + G QK ++ E + +L+
Sbjct: 785 HLGNTVVQKLFDYCSDPVKEMMLERIAPHLAQIGIHKNGTWAAQKIVDVASTEAQMRLIA 844
Query: 763 RELDGQVMRCVRDQNGNHVIQKCIECIPPEKIGFIISAFCGQVAALSMHPYGCRVIQRVL 822
+ L + DQ GN+V+Q C++ P F+ A Q ++ YG R ++ L
Sbjct: 845 KHLQPYIPLLFADQFGNYVVQTCLKFGAPMN-DFVFEAILNQFWVIAQSRYGSRAVRACL 903
Query: 823 EHC-ADKHQCQFIVDEILDNVCALAQDQYGNYVTQHVLQR-GKPLERSKIIRKLSGHIVQ 880
E + Q + I LA + G + ++++ P + R+ IV+
Sbjct: 904 ESPDVTEEQRVLVAAAITVYSVHLAMNGNGTLLLTYLVENMNYPHIPILLTRRFVQDIVR 963
Query: 881 LSQHKFASNVIEKCLAY--GGPAERELIIEEIL 911
+ H+ A N + K ++ G A +L+++ IL
Sbjct: 964 VCTHRLAYNSLLKIISISQGDTACGDLVVDAIL 996
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/253 (18%), Positives = 97/253 (38%), Gaps = 46/253 (18%)
Query: 633 NDPKICNFLEELKSGKGRRFELSDIT----GHIVEFSADQHGSRFIQQKLENCSVDEKAS 688
N PK+ + + +G + E+ DI + + S+D G+ +Q+ + CS K
Sbjct: 746 NAPKLRQVRKRIDNGLCTQEEVEDIAINWLDEVSDLSSDHLGNTVVQKLFDYCSDPVKEM 805
Query: 689 VFKEILPHASK-------------------------------------LMTDVFGNYVIQ 711
+ + I PH ++ L D FGNYV+Q
Sbjct: 806 MLERIAPHLAQIGIHKNGTWAAQKIVDVASTEAQMRLIAKHLQPYIPLLFADQFGNYVVQ 865
Query: 712 KFFEYGSPAQRKELANQLVGQILPLSMQMYGCRVIQKALETIEI--EQKAQLVRELDGQV 769
++G+P + ++ Q ++ YG R ++ LE+ ++ EQ+ + +
Sbjct: 866 TCLKFGAP-MNDFVFEAILNQFWVIAQSRYGSRAVRACLESPDVTEEQRVLVAAAITVYS 924
Query: 770 MRCVRDQNGNHVIQKCIECIPPEKIGFIIS-AFCGQVAALSMHPYGCRVIQRVLEHCADK 828
+ + NG ++ +E + I +++ F + + H + +++
Sbjct: 925 VHLAMNGNGTLLLTYLVENMNYPHIPILLTRRFVQDIVRVCTHRLAYNSLLKIISISQGD 984
Query: 829 HQC-QFIVDEILD 840
C +VD ILD
Sbjct: 985 TACGDLVVDAILD 997
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 71/178 (39%), Gaps = 12/178 (6%)
Query: 798 ISAFCGQVAALSMH--------PYGCRVIQRVLEHCADKHQCQFIVDEILDNVCALAQDQ 849
++ F Q+ ++S P +V +R+ + + + I LD V L+ D
Sbjct: 726 LTDFAAQIPSISKAFSSRRLNAPKLRQVRKRIDNGLCTQEEVEDIAINWLDEVSDLSSDH 785
Query: 850 YGNYVTQHVLQRGKPLERSKIIRKLSGHIVQLSQHKFASNVIEKCLAYGGPAERELIIEE 909
GN V Q + + ++ +++ H+ Q+ HK + +K + A E +
Sbjct: 786 LGNTVVQKLFDYCSDPVKEMMLERIAPHLAQIGIHKNGTWAAQKIVDV---ASTEAQMRL 842
Query: 910 ILGHNEETLLTMMKDQFANYVVQKIFELSSESQQAMMLSRIRTHAHVLKKYTYGKHIV 967
I H + + + DQF NYVVQ + + + I V+ + YG V
Sbjct: 843 IAKHLQPYIPLLFADQFGNYVVQTCLKFGAP-MNDFVFEAILNQFWVIAQSRYGSRAV 899
>sp|O60059|YG58_SCHPO Pumilio domain-containing protein C56F2.08c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPBC56F2.08c PE=1
SV=1
Length = 661
Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 130/298 (43%), Gaps = 18/298 (6%)
Query: 633 NDPKICNFLEELKSGKGRRFELSDITGHIVEFSADQHGSRFIQQKLENCSVDEKASVFKE 692
N+ L +++ + R+FE S + E + + Q+++E + +
Sbjct: 144 NNKVATEILPPVETLRSRQFEASKLR----EIRKNIDSGFYTQEEIE--------VIARS 191
Query: 693 ILPHASKLMTDVFGNYVIQKFFEYGSPAQRKELANQLVGQILPLSMQMYGCRVIQKALET 752
+L ++L +D GN V+QKFFEY S ++ + ++ + + + G QK ++
Sbjct: 192 MLDDVAELSSDYLGNTVVQKFFEYCSDPIKEAMLERIAPYLAAIGIHKNGTWAAQKIIDV 251
Query: 753 IEIEQKAQL-VRELDGQVMRCVRDQNGNHVIQKCIECIPPEKIGFIISAFCGQVAALSMH 811
E++ L V+ L DQ GN+V Q C+ P K F+ +
Sbjct: 252 ASTEKQMDLIVKHLRPYTALLYFDQFGNYVAQCCLRFKYP-KNTFLFEVMARHCCEIGQS 310
Query: 812 PYGCRVIQRVLEH-CADKHQCQFIVDEILDNVCALAQDQYGNYVTQHVLQRGKPLERSKI 870
+G R I+ LE+ A Q +V I+ N LA + G + +L R ++
Sbjct: 311 RFGARAIRACLENENATFEQQALVVASIIINSHLLATNSNGMLLLTWLLDNSFFRNRHRL 370
Query: 871 IR-KLSGHIVQLSQHKFASNVIEKCLAYGG-PAERELIIEEILGHNEETLLT-MMKDQ 925
+ L+ H+ HK AS +I K + P R L+++ + ++ +LT +++DQ
Sbjct: 371 LAIHLATHLHTTCTHKLASTLIFKLINNKQEPESRNLLLKNLFFSEKDNVLTYILQDQ 428
Score = 37.7 bits (86), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 47/105 (44%), Gaps = 3/105 (2%)
Query: 828 KHQCQFIVDEILDNVCALAQDQYGNYVTQHVLQRGKPLERSKIIRKLSGHIVQLSQHKFA 887
+ + + I +LD+V L+ D GN V Q + + ++ +++ ++ + HK
Sbjct: 182 QEEIEVIARSMLDDVAELSSDYLGNTVVQKFFEYCSDPIKEAMLERIAPYLAAIGIHKNG 241
Query: 888 SNVIEKCLAYGGPAERELIIEEILGHNEETLLTMMKDQFANYVVQ 932
+ +K + A E ++ I+ H + DQF NYV Q
Sbjct: 242 TWAAQKIIDV---ASTEKQMDLIVKHLRPYTALLYFDQFGNYVAQ 283
>sp|Q9FIE9|PUM16_ARATH Putative pumilio homolog 16 OS=Arabidopsis thaliana GN=APUM16 PE=3
SV=2
Length = 332
Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 78/151 (51%), Gaps = 5/151 (3%)
Query: 813 YGCRVIQRVLEHCADKHQCQFIVDEILDNVCALAQDQYGNYVTQHVLQRGKPLERSKIIR 872
YGC + ++ D + ++D + +N L+ D YGN+V QHVL+ I
Sbjct: 166 YGCIALNEIITDLDDPYYRDQLLDIVANNALLLSNDAYGNFVVQHVLKLRDSRCTRNIAD 225
Query: 873 KLSGHIVQLSQHKFASNVIEKCLAYGGPAERELIIEEILGHNEETLLTMMKDQFANYVVQ 932
KL G+ V+LS K+ S ++E+ L G ++ ++L E L+ + + ++ N+VV
Sbjct: 226 KLCGYCVELSFKKYGSYIVERLLE-AGDVPMATVVLDLLACKTEMLIRLARSEYGNFVVC 284
Query: 933 KIFELSSESQQAM----MLSRIRTHAHVLKK 959
K EL++E A +++R+ + H+L +
Sbjct: 285 KALELTNEILTADLFYGLVNRLMPYRHLLHR 315
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 92/205 (44%), Gaps = 6/205 (2%)
Query: 660 HIVEFSADQHGSRFIQQKLENCSVDEKASVFKEILPHASKLMTDVFGNYVIQKFFEYGSP 719
+ + + +++GS+ +Q KL S D F+ I+ +MTD + +YV +
Sbjct: 86 YFMVITTNKNGSKTLQ-KLMGMSDDMDVFFFEAIMRLFIHVMTDKYASYVTIQGMRVFQQ 144
Query: 720 AQRKELANQLVGQILPLSMQMYGCRVIQKALETIEI-EQKAQLVRELDGQVMRCVRDQNG 778
+R+ + +Q++ L+ YGC + + + ++ + QL+ + + D G
Sbjct: 145 DKRELMYDQILRYACFLAGDQYGCIALNEIITDLDDPYYRDQLLDIVANNALLLSNDAYG 204
Query: 779 NHVIQKCIECIPPEKIGFIISAFCGQVAALSMHPYGCRVIQRVLEHCADKHQCQFIVDEI 838
N V+Q ++ I CG LS YG +++R+LE D ++D +
Sbjct: 205 NFVVQHVLKLRDSRCTRNIADKLCGYCVELSFKKYGSYIVERLLE-AGDVPMATVVLDLL 263
Query: 839 ---LDNVCALAQDQYGNYVTQHVLQ 860
+ + LA+ +YGN+V L+
Sbjct: 264 ACKTEMLIRLARSEYGNFVVCKALE 288
>sp|Q9C8B8|PUM17_ARATH Putative pumilio homolog 17 OS=Arabidopsis thaliana GN=APUM17 PE=5
SV=2
Length = 332
Score = 67.4 bits (163), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 86/165 (52%), Gaps = 6/165 (3%)
Query: 808 LSMHPYGCRVIQRVLEHCADKHQCQFIVDEILDNVCALAQDQYGNYVTQHVLQRGKPLER 867
L+ YGC + +++ D + ++D + +N L+ D YGN+V QHVL+
Sbjct: 161 LARDQYGCIALNEIIKELDDPYYRDELMDIVSNNALLLSNDAYGNFVVQHVLKLHDSRCT 220
Query: 868 SKIIRKLSGHIVQLSQHKFASNVIEKCLAYGGPAERELIIEEILGHNEETLLTMMKDQFA 927
I KL G+ V+LS K+ S ++E+ L +++ ++L E L+ + + +
Sbjct: 221 GNIADKLCGYCVELSFKKYGSYIVERLLEVRDIPMATIVL-DLLACKTEMLIRLARSENG 279
Query: 928 NYVVQKIFELSSESQQA----MMLSRIRTHAHVLKKYTYGKHIVA 968
N+VV K+ EL+++ A +++++R + +L ++ K IVA
Sbjct: 280 NFVVCKLLELTNDILTADLFYSLVNKLRPYRFLLHRFPESK-IVA 323
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 95/211 (45%), Gaps = 6/211 (2%)
Query: 654 LSDITGHIVEFSADQHGSRFIQQKLENCSVDEKASVFKEILPHASKLMTDVFGNYVIQKF 713
L+ + + + + +++GS+ +Q KL S D F I+ +M D + +YV +
Sbjct: 80 LTSDSDYFMVITRNKNGSKSLQ-KLMRMSDDMDVFFFVAIMRLFIHVMIDKYASYVAIQG 138
Query: 714 FEYGSPAQRKELANQLVGQILPLSMQMYGCRVIQKALETIEI-EQKAQLVRELDGQVMRC 772
+R+ + + ++ L L+ YGC + + ++ ++ + +L+ + +
Sbjct: 139 MRIFKQDKRELMYDHILRYALFLARDQYGCIALNEIIKELDDPYYRDELMDIVSNNALLL 198
Query: 773 VRDQNGNHVIQKCIECIPPEKIGFIISAFCGQVAALSMHPYGCRVIQRVLEHCADKHQCQ 832
D GN V+Q ++ G I CG LS YG +++R+LE D
Sbjct: 199 SNDAYGNFVVQHVLKLHDSRCTGNIADKLCGYCVELSFKKYGSYIVERLLE-VRDIPMAT 257
Query: 833 FIVDEI---LDNVCALAQDQYGNYVTQHVLQ 860
++D + + + LA+ + GN+V +L+
Sbjct: 258 IVLDLLACKTEMLIRLARSENGNFVVCKLLE 288
>sp|Q9LXC5|PUM21_ARATH Putative pumilio homolog 21 OS=Arabidopsis thaliana GN=APUM21 PE=3
SV=1
Length = 517
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 85/193 (44%), Gaps = 8/193 (4%)
Query: 765 LDGQVMRCVRDQNGNHVIQKCIECIPPEKIGFIISAFCGQVAALSMHPYGCRVIQRVLEH 824
+D + D+ G +I I + K + L+ GC + VL+
Sbjct: 294 VDTNFFLLMSDKYGRGLIIPAIRAVDKTKKESLYKLTYEYTLHLARLETGCLALNNVLQE 353
Query: 825 CADKHQCQFIVDEILDNVCALAQDQYGNYVTQHVLQRGKPLERSKIIRKLSGHIVQLSQH 884
++ I + + +N L+ D YG +V Q++L P+ + I +L G +L+
Sbjct: 354 IRGIYR-DLIFECVANNADWLSFDPYGTHVVQNILILQNPVATTAIAERLRGSFFRLAME 412
Query: 885 KFASNVIEKCLAYGGPAERELIIEEILGHNEETLLTMMKDQFANYVVQKIFELSSESQQA 944
+ S V+EKCL R+ ++EE G+ +E + M D+F N+VVQ + E +
Sbjct: 413 RQGSYVVEKCLK--SDFARDQVLEEFRGNAKE-WVRMTTDKFGNFVVQSALRVMKEKEMR 469
Query: 945 MML----SRIRTH 953
+L ++R H
Sbjct: 470 PLLREFVEKLRPH 482
>sp|O81465|PUM15_ARATH Pumilio homolog 15 OS=Arabidopsis thaliana GN=APUM15 PE=3 SV=1
Length = 477
Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 121/264 (45%), Gaps = 20/264 (7%)
Query: 689 VFKEILPHASKLMTDVFGNYVIQKFFEYGSPAQRKELANQLV---GQILPLSMQMYGCRV 745
+F ++ H +LM D +G+ V +K E + Q + + ++ + + L + +G
Sbjct: 183 IFDNLISHVCELMLDYYGHKVFRKLMEKCTDEQITRVLDIVLEEPFEFVRLCVHTHGTHA 242
Query: 746 IQKALETI-EIEQKAQLVRELDGQVMRCVRDQNGNHVIQKCIECIPPEKIGFIISAFCGQ 804
IQ + ++ EQ ++ + L + +D + VI C P +++
Sbjct: 243 IQGLMRSLCSEEQISRFMETLCYVSLLLTKDVIAHRVILFCFNQFSPSHTRYLLEVIVQN 302
Query: 805 VAALSMHPYGCRVIQRVLEHCADKHQCQFIVDEILDNVCALAQDQYG----------NYV 854
+++ GC ++++++ + + + ++ EI+ L + YG NYV
Sbjct: 303 CYQVAIDQNGCCMLKKLIRQSSRELR-DPLIKEIISIAVRLCGNCYGTLTPKSLLVRNYV 361
Query: 855 TQHVLQRGKPLERSKIIRKLSGHIVQLSQHKFASNVIEKCLAYGGPAERELIIEEILGHN 914
Q++L+ S + + L G+ VQLS K+ S+V++KCL + R II E+L
Sbjct: 362 VQYLLRLKDYEVTSALSKHLDGNYVQLSYDKYGSHVVQKCLESREFSSRR-IIAELLSDI 420
Query: 915 EETLLTMMKDQFANYVVQKIFELS 938
+ L+ D + +YV+Q + +S
Sbjct: 421 DSLLV----DPYGDYVIQTAWIVS 440
Score = 60.1 bits (144), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 92/206 (44%), Gaps = 13/206 (6%)
Query: 662 VEFSADQHGSRFIQQKLENCSVDEKASVFKEILPHASKLMT-DVFGNYVIQKFFEYGSPA 720
V HG+ IQ + + +E+ S F E L + S L+T DV + VI F SP+
Sbjct: 231 VRLCVHTHGTHAIQGLMRSLCSEEQISRFMETLCYVSLLLTKDVIAHRVILFCFNQFSPS 290
Query: 721 QRKELANQLVGQILPLSMQMYGCRVIQKALETIEIEQKAQLVRELDGQVMRCVRDQNG-- 778
+ L +V +++ GC +++K + E + L++E+ +R + G
Sbjct: 291 HTRYLLEVIVQNCYQVAIDQNGCCMLKKLIRQSSRELRDPLIKEIISIAVRLCGNCYGTL 350
Query: 779 --------NHVIQKCIECIPPEKIGFIISAFCGQVAALSMHPYGCRVIQRVLEHCADKHQ 830
N+V+Q + E + G LS YG V+Q+ LE + +
Sbjct: 351 TPKSLLVRNYVVQYLLRLKDYEVTSALSKHLDGNYVQLSYDKYGSHVVQKCLE--SREFS 408
Query: 831 CQFIVDEILDNVCALAQDQYGNYVTQ 856
+ I+ E+L ++ +L D YG+YV Q
Sbjct: 409 SRRIIAELLSDIDSLLVDPYGDYVIQ 434
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 66/143 (46%), Gaps = 11/143 (7%)
Query: 651 RFELSDITGHIVEFSADQHGSRFIQQKLENCSVDEKASVFKEILPHASKLMTDVFG---- 706
R+ L I + + + DQ+G +++ + S + + + KEI+ A +L + +G
Sbjct: 293 RYLLEVIVQNCYQVAIDQNGCCMLKKLIRQSSRELRDPLIKEIISIAVRLCGNCYGTLTP 352
Query: 707 ------NYVIQKFFEYGSPAQRKELANQLVGQILPLSMQMYGCRVIQKALETIEIEQKAQ 760
NYV+Q L+ L G + LS YG V+QK LE+ E + +
Sbjct: 353 KSLLVRNYVVQYLLRLKDYEVTSALSKHLDGNYVQLSYDKYGSHVVQKCLESREFSSR-R 411
Query: 761 LVRELDGQVMRCVRDQNGNHVIQ 783
++ EL + + D G++VIQ
Sbjct: 412 IIAELLSDIDSLLVDPYGDYVIQ 434
Score = 37.4 bits (85), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Query: 657 ITGHIVEFSADQHGSRFIQQKLENCSVDEKASVFKEILPHASKLMTDVFGNYVIQKFFEY 716
+ G+ V+ S D++GS +Q+ LE+ + + E+L L+ D +G+YVIQ +
Sbjct: 381 LDGNYVQLSYDKYGSHVVQKCLESREFSSR-RIIAELLSDIDSLLVDPYGDYVIQTAWIV 439
Query: 717 GSPAQRKELANQLVGQILPLSMQMYGCRVI 746
+ + + L + + CR++
Sbjct: 440 SEVRDKHDDSESFYVDFYQLILWLVFCRIM 469
Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 102/266 (38%), Gaps = 39/266 (14%)
Query: 708 YVIQKFFEYGSPAQRKELANQLVGQILPLSMQMYGCRVIQKALETIEIEQKAQ---LVRE 764
YVI K G ++ + L+ + L + YG +V +K +E EQ + +V E
Sbjct: 170 YVIAK----GLKETIDKIFDNLISHVCELMLDYYGHKVFRKLMEKCTDEQITRVLDIVLE 225
Query: 765 LDGQVMRCVRDQNGNHVIQKCIECI-PPEKIGFIISAFCGQVAALSMHPYGCRVIQRVLE 823
+ +R +G H IQ + + E+I + C L+ RVI
Sbjct: 226 EPFEFVRLCVHTHGTHAIQGLMRSLCSEEQISRFMETLCYVSLLLTKDVIAHRVILFCFN 285
Query: 824 HCADKHQCQFIVDEILDNVCALAQDQYGNYVTQHVLQRGKPLERSKIIRKLSGHIVQLSQ 883
+ H +++++ I+ N +A DQ G + + ++++ R +I+++ V+L
Sbjct: 286 QFSPSHT-RYLLEVIVQNCYQVAIDQNGCCMLKKLIRQSSRELRDPLIKEIISIAVRLCG 344
Query: 884 HKFASNVIEKCLAYGGPAERELIIEEILGHNEETLLTMMKDQFANYVVQKIFELSSESQQ 943
+ YG + L++ NYVVQ + L
Sbjct: 345 N-----------CYGTLTPKSLLVR-------------------NYVVQYLLRLKDYEVT 374
Query: 944 AMMLSRIRTHAHVLKKYTYGKHIVAR 969
+ + + + L YG H+V +
Sbjct: 375 SALSKHLDGNYVQLSYDKYGSHVVQK 400
>sp|Q12221|PUF2_YEAST mRNA-binding protein PUF2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PUF2 PE=1 SV=1
Length = 1075
Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 103/245 (42%), Gaps = 9/245 (3%)
Query: 672 RFIQQKLENCSVDEKASVFKEILPHASKLMTDVFGNYVIQKFFEYGSPAQRKELANQLVG 731
+F L +++ A V + LP +L +D GN VIQK FE S R + +
Sbjct: 559 QFDSNSLSTIEMEQLAIVMLDQLP---ELSSDYLGNTVIQKLFENSSNIIRDIMLRKCNK 615
Query: 732 QILPLSMQMYGCRVIQKALETIEIEQKAQLVRE-LDGQVMRCVRDQNGNHVIQKCIECIP 790
+ + + G V QK ++ ++ LV + DQ GN+VIQ ++
Sbjct: 616 YLTSMGVHKNGTWVCQKIIKMANTPRQINLVTSGVSDYCTPLFNDQFGNYVIQGILKFGF 675
Query: 791 PEKIGFIISAFCGQVAALSMHPYGCRVIQRVLEHCADKHQCQFIVDEILDNVCA--LAQD 848
P FI + + + YG R ++ LE + QCQ + L V + LA D
Sbjct: 676 PWN-SFIFESVLSHFWTIVQNRYGSRAVRACLEADSIITQCQLLTITSLIIVLSPYLATD 734
Query: 849 QYGNYVTQHVLQRGKPLERSKII--RKLSGHIVQLSQHKFASNVIEKCLAYGGPAERELI 906
G + +L ++ I+ + ++ ++V+L HK S + K L G E L
Sbjct: 735 TNGTLLITWLLDTCTLPNKNLILCDKLVNKNLVKLCCHKLGSLTVLKILNLRGGEEEALS 794
Query: 907 IEEIL 911
+I+
Sbjct: 795 KNKII 799
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 57/131 (43%), Gaps = 6/131 (4%)
Query: 838 ILDNVCALAQDQYGNYVTQHVLQRGKPLERSKIIRKLSGHIVQLSQHKFASNVIEKCLAY 897
+LD + L+ D GN V Q + + + R ++RK + ++ + HK + V +K +
Sbjct: 577 MLDQLPELSSDYLGNTVIQKLFENSSNIIRDIMLRKCNKYLTSMGVHKNGTWVCQKIIKM 636
Query: 898 GG-PAERELIIEEILGHNEETLLTMMKDQFANYVVQKIFELSSESQQAMMLSRIRTHAHV 956
P + L+ + + + DQF NYV+Q I + + + + +H
Sbjct: 637 ANTPRQINLVTSGV----SDYCTPLFNDQFGNYVIQGILKFGFP-WNSFIFESVLSHFWT 691
Query: 957 LKKYTYGKHIV 967
+ + YG V
Sbjct: 692 IVQNRYGSRAV 702
>sp|O61345|PEN_DROME Protein penguin OS=Drosophila melanogaster GN=pen PE=2 SV=1
Length = 737
Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 81/164 (49%), Gaps = 15/164 (9%)
Query: 749 ALETIEIEQKAQLVRELDGQVMRCVRDQNGNHVIQKCIECIPPEKIGFIISAFCGQVAAL 808
A +T EI ++A + E +RC R +N + ++++ + + +G IS +
Sbjct: 130 AKDTYEISKEANQIHE----KLRCRRTENKDKLVEQIYKVL---NVGDTISKV------V 176
Query: 809 SMHPYGCRVIQRVLEHCADKHQCQFIVDEILDNVCALAQDQYGNYVTQHVLQRGKPLERS 868
H RVIQ +L++ + + + I +++L + Q +Y + Q +L+ G P ++
Sbjct: 177 KAHDTA-RVIQSMLKYASPALRAE-ISEKLLPFTVEMCQSKYAQFCVQRMLKYGAPATKA 234
Query: 869 KIIRKLSGHIVQLSQHKFASNVIEKCLAYGGPAERELIIEEILG 912
K++ L GHIV+L+ H S +++ P +R + +E G
Sbjct: 235 KLVDSLYGHIVRLAGHSIGSGLLDSMYQSATPNQRIYMRQEFYG 278
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/225 (18%), Positives = 93/225 (41%), Gaps = 16/225 (7%)
Query: 671 SRFIQQKLENCSVDEKASVFKEILPHASKLMTDVFGNYVIQKFFEYGSPAQRKELANQLV 730
+R IQ L+ S +A + +++LP ++ + + +Q+ +YG+PA + +L + L
Sbjct: 182 ARVIQSMLKYASPALRAEISEKLLPFTVEMCQSKYAQFCVQRMLKYGAPATKAKLVDSLY 241
Query: 731 GQILPLSMQMYGCRVIQKALETIEIEQKAQLVRELDGQVMRCVRDQNGNHVIQKCIECIP 790
G I+ L+ G ++ ++ Q+ + +E G + R +D N + E
Sbjct: 242 GHIVRLAGHSIGSGLLDSMYQSATPNQRIYMRQEFYGDLYRKAKDSNVKTLSDTYKEATN 301
Query: 791 PEKIGFIISAFCGQVAALSMHPYGCRVIQRVLEHCA----------DKHQCQFIVDEILD 840
+ ++ G V A H +++ L H D+ + + V
Sbjct: 302 ------MKASILGSVKANLDHVANKQLVDSALVHAVMLEYLRACDEDEEKLEETVTAFAA 355
Query: 841 NVCALAQDQYGNYVTQHVLQRGKPLERSKIIRKLSGHIVQLSQHK 885
V + + G+ + P R II+ + H+++++ H+
Sbjct: 356 LVPHMLSTKEGSEAAVICFYKSTPKNRRAIIKNIKEHLLKIANHE 400
Score = 42.0 bits (97), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 38/74 (51%)
Query: 840 DNVCALAQDQYGNYVTQHVLQRGKPLERSKIIRKLSGHIVQLSQHKFASNVIEKCLAYGG 899
D + + + V Q +L+ P R++I KL V++ Q K+A +++ L YG
Sbjct: 170 DTISKVVKAHDTARVIQSMLKYASPALRAEISEKLLPFTVEMCQSKYAQFCVQRMLKYGA 229
Query: 900 PAERELIIEEILGH 913
PA + +++ + GH
Sbjct: 230 PATKAKLVDSLYGH 243
>sp|Q8BKS9|K0020_MOUSE Pumilio domain-containing protein KIAA0020 OS=Mus musculus
GN=Kiaa0020 PE=2 SV=2
Length = 647
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 127/282 (45%), Gaps = 29/282 (10%)
Query: 653 ELSDITGHIVEFSADQHGSRFIQQKLENCSVDEKASVFKEILPHAS-KLMTDVFGN---Y 708
+LSD T + + A +H +++K +C +++ + ++ K+ T F +
Sbjct: 124 QLSDKTNYDIVVRA-KHIWESLRRK--DCDKEKRVKLMSDLQKLIQGKIKTIAFAHDSTR 180
Query: 709 VIQKFFEYGSPAQRKELANQLVGQILPLSMQMYGCRVIQKALETIEIEQKAQLVRELDGQ 768
VIQ F +YG+ QRK+ +L G ++ LS Y +++K L Q A+++R G
Sbjct: 181 VIQCFIQYGNEEQRKQAFQELQGDLVELSKAKYSRNIVKKFLMYGSKPQVAEIIRSFKGH 240
Query: 769 VMRCVRDQNGNHVIQKCI-ECIPPEKIGFIISAFCG---QVAALSMHPYGCRVIQRVLEH 824
V + +R + +++ + E+ + G Q+ + HP + +VLE
Sbjct: 241 VRKMLRHSEASAIVEYAYNDKAILEQRNMLTEELYGNTFQLYKSADHP----TLDKVLEL 296
Query: 825 CADKHQCQFIVDEILDNVCALAQDQYGNYVTQHVL---------QRGKPLERSKIIRKLS 875
K + I+DE+ + +AQ + V +H L P RS++I +
Sbjct: 297 QPAK--LELIMDEMKQILTPMAQKE---AVIKHSLVHKVFLDFFTYAPPKPRSELIEAIR 351
Query: 876 GHIVQLSQHKFASNVIEKCLAYGGPAERELIIEEILGHNEET 917
+V L+ + V CL +G P +R++I++ + + E+
Sbjct: 352 EAVVYLAHTHDGARVAMHCLWHGTPKDRKVIVKTMKTYVEKV 393
>sp|Q9LRZ3|PUM24_ARATH Pumilio homolog 24 OS=Arabidopsis thaliana GN=APUM24 PE=2 SV=1
Length = 641
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 124/293 (42%), Gaps = 38/293 (12%)
Query: 654 LSDITGHIVEFSADQHGSRFIQQKLENCSVDEKASVFKEILPHASKLMTDVFGNYVIQKF 713
+ + G + E + SR +Q ++ CS EK +F E+ P L ++ + + IQK
Sbjct: 116 IRKMKGKVPEIAVSHVSSRVLQTCVKFCSQAEKDVLFTELQPQFLNLASNKYAVHFIQKM 175
Query: 714 FEYGSPAQRKELANQLVGQILPLSMQMYGCRVIQKALETIEIEQKAQLVREL---DGQVM 770
+ S Q + L G + PL ++G V++ A QK +L+ EL + Q+
Sbjct: 176 LDGASKQQLAACISSLRGHVAPLLRHVFGSLVVEHAYHLGSAAQKQELLAELYSTELQLF 235
Query: 771 RCVRDQNGNHVIQKCIECIPPEKIGFIISAFCGQVAALSMHPYGCRVIQRVLEHCADKHQ 830
+ + N V+ II+ Q A++ H +IQ +LE H
Sbjct: 236 KGLTTSNEKTVVD-------------IIAKLGLQKGAVNRHMTA--IIQPILEKGIVDHT 280
Query: 831 C--QFIVD--EILDNVCA--------------LAQDQYGNYVTQHVLQRGKPLERSKIIR 872
+ +++ I D A + + G+ + ++ G ER KII+
Sbjct: 281 ITHKLLIEYLTIADKTSAADVLQLLTGSLLLRMVHTRDGSRLAMLSIKHGSAKERKKIIK 340
Query: 873 KLSGHIVQLSQHKFASNVIEKCLAYGGPAERELIIEEILGHNEETLLTMMKDQ 925
+ H+ +++ +F S V+ C+ + + +L+ + I+ E TL ++ D+
Sbjct: 341 AMKEHVKKMAFDQFGSMVLA-CI-FSIVDDTKLVTKIIVRELEATLKDLVMDK 391
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 60/106 (56%), Gaps = 8/106 (7%)
Query: 866 ERSKII----RKLSGHIVQLSQHKFASNVIEKCLAYGGPAERELIIEEILGHNEETLLTM 921
+RSK+I RK+ G + +++ +S V++ C+ + AE++++ E+ + L +
Sbjct: 107 DRSKLISEAIRKMKGKVPEIAVSHVSSRVLQTCVKFCSQAEKDVLFTEL----QPQFLNL 162
Query: 922 MKDQFANYVVQKIFELSSESQQAMMLSRIRTHAHVLKKYTYGKHIV 967
+++A + +QK+ + +S+ Q A +S +R H L ++ +G +V
Sbjct: 163 ASNKYAVHFIQKMLDGASKQQLAACISSLRGHVAPLLRHVFGSLVV 208
Score = 37.7 bits (86), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 72/162 (44%), Gaps = 11/162 (6%)
Query: 759 AQLVRELDGQVMRCVRDQNGNHVIQKCIE-CIPPEKIGFIISAFCGQVAALSMHPYGCRV 817
++ +R++ G+V + V+Q C++ C EK + + Q L+ + Y
Sbjct: 113 SEAIRKMKGKVPEIAVSHVSSRVLQTCVKFCSQAEK-DVLFTELQPQFLNLASNKYAVHF 171
Query: 818 IQRVLEHCADKHQCQFIVDEILDNVCALAQDQYGNYVTQHVLQRGKPLERSKIIRKLSGH 877
IQ++L+ A K Q + + +V L + +G+ V +H G ++ +++ +L
Sbjct: 172 IQKMLDG-ASKQQLAACISSLRGHVAPLLRHVFGSLVVEHAYHLGSAAQKQELLAELYST 230
Query: 878 IVQL------SQHKFASNVIEKCLAYGGPAEREL--IIEEIL 911
+QL S K ++I K G R + II+ IL
Sbjct: 231 ELQLFKGLTTSNEKTVVDIIAKLGLQKGAVNRHMTAIIQPIL 272
Score = 37.7 bits (86), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 46/96 (47%)
Query: 724 ELANQLVGQILPLSMQMYGCRVIQKALETIEIEQKAQLVRELDGQVMRCVRDQNGNHVIQ 783
E ++ G++ +++ RV+Q ++ +K L EL Q + ++ H IQ
Sbjct: 114 EAIRKMKGKVPEIAVSHVSSRVLQTCVKFCSQAEKDVLFTELQPQFLNLASNKYAVHFIQ 173
Query: 784 KCIECIPPEKIGFIISAFCGQVAALSMHPYGCRVIQ 819
K ++ +++ IS+ G VA L H +G V++
Sbjct: 174 KMLDGASKQQLAACISSLRGHVAPLLRHVFGSLVVE 209
>sp|Q15397|K0020_HUMAN Pumilio domain-containing protein KIAA0020 OS=Homo sapiens
GN=KIAA0020 PE=1 SV=3
Length = 648
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 122/288 (42%), Gaps = 41/288 (14%)
Query: 653 ELSDITGHIVEFSADQHGSRFIQQKLENCSVDEKASVFKEILPHAS-KLMTDVFGN---Y 708
+LSD T + + A Q + ++C +++ + ++ K+ T F +
Sbjct: 125 QLSDKTNYDIVVRAKQMWEIL---RRKDCDKEKRVKLMSDLQKLIQGKIKTIAFAHDSTR 181
Query: 709 VIQKFFEYGSPAQRKELANQLVGQILPLSMQMYGCRVIQKALETIEIEQKAQLVRELDGQ 768
VIQ + +YG+ QRK+ +L ++ LS Y +++K L Q A+++R G
Sbjct: 182 VIQCYIQYGNEEQRKQAFEELRDDLVELSKAKYSRNIVKKFLMYGSKPQIAEIIRSFKGH 241
Query: 769 VMRCVRDQNGNHVIQKCIECIPPEKIGFIISAFCGQVAALSMHPYGC----------RVI 818
V + +R + +++ + A Q L+ YG R +
Sbjct: 242 VRKMLRHAEASAIVE----------YAYNDKAILEQRNMLTEELYGNTFQLYKSADHRTL 291
Query: 819 QRVLEHCADKHQCQFIVDEILDNVCALAQDQYGNYVTQHVL---------QRGKPLERSK 869
+VLE +K + I+DE+ + +AQ + V +H L P RS+
Sbjct: 292 DKVLEVQPEK--LELIMDEMKQILTPMAQKE---AVIKHSLVHKVFLDFFTYAPPKLRSE 346
Query: 870 IIRKLSGHIVQLSQHKFASNVIEKCLAYGGPAERELIIEEILGHNEET 917
+I + +V L+ + V CL +G P +R++I++ + + E+
Sbjct: 347 MIEAIREAVVYLAHTHDGARVAMHCLWHGTPKDRKVIVKTMKTYVEKV 394
>sp|Q562C7|K0020_RAT Pumilio domain-containing protein KIAA0020 homolog OS=Rattus
norvegicus PE=2 SV=1
Length = 647
Score = 53.9 bits (128), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 70/334 (20%), Positives = 151/334 (45%), Gaps = 35/334 (10%)
Query: 653 ELSDITGHIVEFSADQHGSRFIQQKLENCSVDEKASVFKEILPHAS-KLMTDVFGN---Y 708
+LSD T + V A +H +++K +C +++ + ++ K+ T F +
Sbjct: 124 QLSDKTNYDVVVRA-KHIWESLRRK--DCDKEKRVKLMSDLQKLIQGKIKTIAFAHDSTR 180
Query: 709 VIQKFFEYGSPAQRKELANQLVGQILPLSMQMYGCRVIQKALETIEIEQKAQLVRELDGQ 768
VIQ +YGS QRK +L G ++ LS Y +++K L Q A+++R G
Sbjct: 181 VIQCLIQYGSEEQRKWAFEELQGDLVELSKAKYSRNIVKKFLMYGSKPQIAEIIRSFKGH 240
Query: 769 VMRCVRDQNGNHVIQKCI-ECIPPEKIGFIISAFCG---QVAALSMHPYGCRVIQRVLEH 824
V + +R + +++ + E+ + G Q+ + HP +++VLE
Sbjct: 241 VRKMLRHSEASAIVEYAYNDKAILEQRNMLTEELYGNTFQLYKSADHP----TLEKVLE- 295
Query: 825 CADKHQCQFIVDEILDNVCALAQDQYGNYVTQHVL---------QRGKPLERSKIIRKLS 875
+ + I+DE+ + +AQ + V +H L P RS++I +
Sbjct: 296 -VQPGKLELILDEMKQILTPMAQKE---AVIKHSLVHKVFLDFFTYAPPKLRSELIEAIR 351
Query: 876 GHIVQLSQHKFASNVIEKCLAYGGPAERELIIEEILGHNEETLLTMMKDQFANYVVQKIF 935
+V L+ + V CL +G P +R++I++ + + E+ + Q+++ V+ F
Sbjct: 352 EAVVYLAHTHDGARVAMHCLWHGTPKDRKVIVKTMKTYVEK----IANGQYSHLVLLAAF 407
Query: 936 ELSSESQ--QAMMLSRIRTHAHVLKKYTYGKHIV 967
+ +++ + +++S + + + YG+ ++
Sbjct: 408 DCIDDTKLVKQIIISEVISSLPSIVNDKYGRKVL 441
>sp|Q9XI17|PUM20_ARATH Putative pumilio homolog 20 OS=Arabidopsis thaliana GN=APUM20 PE=5
SV=2
Length = 332
Score = 53.5 bits (127), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 110/240 (45%), Gaps = 17/240 (7%)
Query: 734 LPLSMQMYGCRVIQKAL---ETIEIEQKAQLVRELDGQVMRCVRDQNGNHVIQKCIECIP 790
L ++ M G + IQK L + ++ A ++R + + + D+ ++V+++ +
Sbjct: 95 LMIARNMNGSKRIQKLLGKTDDVDALFAAAILR----RFLHIITDKYASYVVRRGMTVFD 150
Query: 791 PEKIGFIISAFCGQVAALSMHPYGCRVIQRVLEHCADKHQCQFIVDEILDNVCALAQDQY 850
+K + + ++ +G + ++ D ++ + + D I L+ D Y
Sbjct: 151 KKKKKAMYEHILHYASHIARDKHGNLALNDII---TDAYRNK-LFDVIAHKALVLSNDAY 206
Query: 851 GNYVTQHVLQRGKPLERSKIIRKLSGHIVQLSQHKFASNVIEKCLAYGGPAERELIIEEI 910
GN+V Q VL+ ++ I+ L GH V LS K+ S V++ L +++EE+
Sbjct: 207 GNFVIQRVLKLNDLRSKNNIVVSLRGHFVDLSFQKYGSYVVDVLLE--TKESMVVVVEEL 264
Query: 911 LGHNEETLLTMMKDQFANYVVQKIFELSSESQQAMMLSRIRTHA----HVLKKYTYGKHI 966
+ + L+ + ++++ N++V K ++ + L H H L +++ GK+I
Sbjct: 265 MECEGDMLMRLARNEYGNFLVCKALRVTQKEMVRTDLFWGLVHKLKPFHNLLRWSRGKNI 324
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 30/200 (15%)
Query: 616 VSNRYSGWQGQRGFESYNDPKICNFLEELKSGKGRRFELSDITGHIVEFSA----DQHGS 671
++++Y+ + +RG ++ K K +E HI+ +++ D+HG+
Sbjct: 133 ITDKYASYVVRRGMTVFD-----------KKKKKAMYE------HILHYASHIARDKHGN 175
Query: 672 RFIQQKLENCSVDEKASVFKEILPHASKLMT-DVFGNYVIQKFFEYGSPAQRKELANQLV 730
L + D + +++ H + +++ D +GN+VIQ+ + + + L
Sbjct: 176 ----LALNDIITDAYRNKLFDVIAHKALVLSNDAYGNFVIQRVLKLNDLRSKNNIVVSLR 231
Query: 731 GQILPLSMQMYGCRVIQKALETIE-IEQKAQLVRELDG-QVMRCVRDQNGNHVIQKCIEC 788
G + LS Q YG V+ LET E + + + E +G +MR R++ GN ++ K +
Sbjct: 232 GHFVDLSFQKYGSYVVDVLLETKESMVVVVEELMECEGDMLMRLARNEYGNFLVCKALRV 291
Query: 789 IPPEKIGFIISAFCGQVAAL 808
E + F G V L
Sbjct: 292 TQKEMVR--TDLFWGLVHKL 309
Score = 33.9 bits (76), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 59/136 (43%), Gaps = 4/136 (2%)
Query: 725 LANQLVGQILPLSMQMYGCRVIQKALETIEIEQKAQLVRELDGQVMRCVRDQNGNHVIQK 784
A ++ + L + Y V+++ + + ++K + + RD++GN +
Sbjct: 121 FAAAILRRFLHIITDKYASYVVRRGMTVFDKKKKKAMYEHILHYASHIARDKHGNLALND 180
Query: 785 CIECIPPEKIGFIISAFCGQVAALSMHPYGCRVIQRVLEHCADKHQCQFIVDEILDNVCA 844
I K+ +I+ + LS YG VIQRVL+ D IV + +
Sbjct: 181 IITDAYRNKLFDVIA---HKALVLSNDAYGNFVIQRVLK-LNDLRSKNNIVVSLRGHFVD 236
Query: 845 LAQDQYGNYVTQHVLQ 860
L+ +YG+YV +L+
Sbjct: 237 LSFQKYGSYVVDVLLE 252
>sp|Q04373|PUF6_YEAST Pumilio homology domain family member 6 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=PUF6 PE=1 SV=1
Length = 656
Score = 53.5 bits (127), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 103/247 (41%), Gaps = 14/247 (5%)
Query: 657 ITGHIVEFSAD--------QHGSRFIQQKLENCSVDEKASVFKEILPHASKLMTDVFGNY 708
++ I E S D SR +Q ++ S D + + + L T +G Y
Sbjct: 149 LSNEIWELSKDCISDLVLKHDASRIVQTLVKYSSKDRREQIVDALKGKFYVLATSAYGKY 208
Query: 709 VIQKFFEYGSPAQRKELANQLVGQILPLSMQMYGCRVIQKALETIEI-EQKAQLVRELDG 767
++ K YGS + R+ + N+L G + L G V++ EQ+ Q+++E G
Sbjct: 209 LLVKLLHYGSRSSRQTIINELHGSLRKLMRHREGAYVVEDLFVLYATHEQRQQMIKEFWG 268
Query: 768 QVMRCVRDQNGNHVIQKCIECIPPEKIGFIISAFCGQV-AALSMHPYGCRVIQRVLEH-- 824
R+ + + I+K E EK I G + A++ G +++ +
Sbjct: 269 SEYAVFRETHKDLTIEKVCES-SIEKRNIIARNLIGTITASVEKGSTGFQILHAAMREYV 327
Query: 825 -CADKHQCQFIVDEILDNVCALAQDQYGNYVTQHVLQRGKPLERSKIIRKLSGHIVQLSQ 883
A++ + +++ + + L G+ V ++ R ER I++ L H +L +
Sbjct: 328 KIANEKEISEMIELLHEQFAELVHTPEGSDVACTLVARANAKERKLILKALKNHAEKLIK 387
Query: 884 HKFASNV 890
+++ + V
Sbjct: 388 NEYGNIV 394
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 82/182 (45%), Gaps = 9/182 (4%)
Query: 805 VAALSMHPYGCRVIQRVLEHCADKHQCQFIVDEILDNVCALAQDQYGNYVTQHVLQRGKP 864
++ L + R++Q ++++ + + Q IVD + LA YG Y+ +L G
Sbjct: 161 ISDLVLKHDASRIVQTLVKYSSKDRREQ-IVDALKGKFYVLATSAYGKYLLVKLLHYGSR 219
Query: 865 LERSKIIRKLSGHIVQLSQHKFASNVIEKCLA-YGGPAERELIIEEILGHNEETLLTMMK 923
R II +L G + +L +H+ + V+E Y +R+ +I+E G + +
Sbjct: 220 SSRQTIINELHGSLRKLMRHREGAYVVEDLFVLYATHEQRQQMIKEFWGSE----YAVFR 275
Query: 924 DQFANYVVQKIFELSSESQQAMMLSRIRTHAHVLKKYTYG---KHIVARFEMLIGEENQT 980
+ + ++K+ E S E + + + I T ++K + G H R + I E +
Sbjct: 276 ETHKDLTIEKVCESSIEKRNIIARNLIGTITASVEKGSTGFQILHAAMREYVKIANEKEI 335
Query: 981 SE 982
SE
Sbjct: 336 SE 337
Score = 43.1 bits (100), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 97/225 (43%), Gaps = 17/225 (7%)
Query: 646 SGKGRRFELSD-ITGHIVEFSADQHGSRFIQQKLENCSVDEKASVFKEILPHASKLMTDV 704
S K RR ++ D + G + +G + + L S + ++ E+ KLM
Sbjct: 181 SSKDRREQIVDALKGKFYVLATSAYGKYLLVKLLHYGSRSSRQTIINELHGSLRKLMRHR 240
Query: 705 FGNYVIQKFFE-YGSPAQRKELANQLVGQILPLSMQMYGCRVIQKALETIEIEQKAQLVR 763
G YV++ F Y + QR+++ + G + + + I+K E+ IE++ + R
Sbjct: 241 EGAYVVEDLFVLYATHEQRQQMIKEFWGSEYAVFRETHKDLTIEKVCES-SIEKRNIIAR 299
Query: 764 ELDGQVMRCVRD-----QNGNHVIQKCIECIPPEKIGFIISAFCGQVAALSMHPYG---- 814
L G + V Q + +++ ++ ++I +I Q A L P G
Sbjct: 300 NLIGTITASVEKGSTGFQILHAAMREYVKIANEKEISEMIELLHEQFAELVHTPEGSDVA 359
Query: 815 CRVIQRVLEHCADKHQCQFIVDEILDNVCALAQDQYGNYVTQHVL 859
C ++ R A+ + + I+ + ++ L +++YGN V +L
Sbjct: 360 CTLVAR-----ANAKERKLILKALKNHAEKLIKNEYGNIVFITIL 399
>sp|P47135|JSN1_YEAST Protein JSN1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=JSN1 PE=1 SV=1
Length = 1091
Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 110/271 (40%), Gaps = 25/271 (9%)
Query: 682 SVDEKASVFKEILPHASKLMTDVFGNYVIQKFFEYGSPAQRKE---LANQLVGQIL-PLS 737
+V+EK + +EI+ + N +I+K + + + L L G+ P
Sbjct: 534 NVNEKEDLLREIIELFEANSDEYQINSLIKKSLNHKGTSDTQNFGPLPEPLSGREFDPPK 593
Query: 738 MQMYGCRVIQKALETIEIEQKAQLVRELDGQVMRCVRDQNGNHVIQKCIECIPPEKIGFI 797
++ + A +EIEQ A + LD ++ D GN ++QK E +
Sbjct: 594 LRELRKSIDSNAFSDLEIEQLA--IAMLD-ELPELSSDYLGNTIVQKLFEHSSDIIKDIM 650
Query: 798 ISAFCGQVAALSMHPYGCRVIQRVLEHCADKHQCQFIVDEILDNVCALAQDQYGNYVTQH 857
+ + ++ +H G Q+++ Q + + D L DQ+GNYV Q
Sbjct: 651 LRKTSKYLTSMGVHKNGTWACQKMITMAHTPRQIMQVTQGVKDYCTPLINDQFGNYVIQC 710
Query: 858 VLQRGKPLERSKIIRKLSGHIVQLSQHKFASNVIEKCLAYGGPAERELIIEEILGHNEET 917
VL+ G P + I + + + Q+++ + + CL +I+ +
Sbjct: 711 VLKFGFPWNQF-IFESIIANFWVIVQNRYGARAVRACLE----------AHDIVTPEQSI 759
Query: 918 LLTMMKDQFANYVVQKIFELSSESQQAMMLS 948
+L+ M +A Y LS+ S A++++
Sbjct: 760 VLSAMIVTYAEY-------LSTNSNGALLVT 783
>sp|Q9LSS8|PUM19_ARATH Putative pumilio homolog 19 OS=Arabidopsis thaliana GN=APUM19 PE=3
SV=2
Length = 327
Score = 50.1 bits (118), Expect = 8e-05, Method: Composition-based stats.
Identities = 38/162 (23%), Positives = 81/162 (50%), Gaps = 6/162 (3%)
Query: 808 LSMHPYGCRVIQRVLEHCADKHQCQFIVDEILDNVCALAQDQYGNYVTQHVLQRGKPLER 867
L+ +GC + ++ D + +++ ++ N L+ D GN+V QHVL
Sbjct: 158 LACDQHGCIALNDIITDADDPYYRDQLLELVVSNALRLSNDASGNFVVQHVLTLYDSRCI 217
Query: 868 SKIIRKLSGHIVQLSQHKFASNVIEKCLAYGGPAERELIIEEILGHNEETLLTMMKDQFA 927
I L G ++LS K+ S ++EK L +++ E+LG + + L+ + +++F
Sbjct: 218 HNIAVNLYGQCIELSFKKYGSYIVEKLLEVE--ESMVVVVVELLGCDGDRLMRLARNEFG 275
Query: 928 NYVVQKIFELSSESQQAM---MLSRIRTHAHVLKKYTYGKHI 966
N+VV K + E + + ++ ++ H+L++ ++G +I
Sbjct: 276 NFVVVKALRFTKEMRMDLFWGLVQKLMPFIHLLRR-SHGNNI 316
Score = 43.5 bits (101), Expect = 0.007, Method: Composition-based stats.
Identities = 53/246 (21%), Positives = 104/246 (42%), Gaps = 8/246 (3%)
Query: 654 LSDITGHIVEFSADQHGSRFIQQKLENCSVDEKASVFKEILPHASKLMTDVFGNYVIQKF 713
L+ + + + + GSR +Q KL S D A IL + TD + +YV +
Sbjct: 77 LTSDSDYFMSIVTTKFGSRRVQ-KLLGKSDDVDAFFCAAILRRFLHITTDKYASYVTIRA 135
Query: 714 FEYGSPAQRKELANQLVGQILPLSMQMYGCRVIQKAL-ETIEIEQKAQLVRELDGQVMRC 772
+K L +++ L L+ +GC + + + + + QL+ + +R
Sbjct: 136 MVVFDKVMKKALYERILYHALDLACDQHGCIALNDIITDADDPYYRDQLLELVVSNALRL 195
Query: 773 VRDQNGNHVIQKCIECIPPEKIGFIISAFCGQVAALSMHPYGCRVIQRVLEHCADKHQCQ 832
D +GN V+Q + I I GQ LS YG +++++LE
Sbjct: 196 SNDASGNFVVQHVLTLYDSRCIHNIAVNLYGQCIELSFKKYGSYIVEKLLEVEESMVVVV 255
Query: 833 FIVDEIL-DNVCALAQDQYGNYVTQHVLQRGKPLERS---KIIRKLSG--HIVQLSQHKF 886
+ D + LA++++GN+V L+ K + +++KL H+++ S
Sbjct: 256 VELLGCDGDRLMRLARNEFGNFVVVKALRFTKEMRMDLFWGLVQKLMPFIHLLRRSHGNN 315
Query: 887 ASNVIE 892
+N+++
Sbjct: 316 IANILD 321
>sp|Q9LVG3|PUM18_ARATH Pumilio homolog 18 OS=Arabidopsis thaliana GN=APUM18 PE=2 SV=1
Length = 327
Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 34/135 (25%), Positives = 65/135 (48%), Gaps = 2/135 (1%)
Query: 808 LSMHPYGCRVIQRVLEHCADKHQCQFIVDEILDNVCALAQDQYGNYVTQHVLQRGKPLER 867
L+ +GC + ++ D + +++ + N L+ D GN+V QHVL
Sbjct: 158 LACDQHGCIALNDIITDADDPYYRDQLLELVASNALRLSNDASGNFVVQHVLTLYDSRCI 217
Query: 868 SKIIRKLSGHIVQLSQHKFASNVIEKCLAYGGPAERELIIEEILGHNEETLLTMMKDQFA 927
I L G ++LS K+ S ++EK L +++ E+LG + + L+ + +++F
Sbjct: 218 HNIAVNLYGQCIELSFKKYGSYIVEKLLEVE--ESMVVVVVELLGCDGDRLMRLARNEFG 275
Query: 928 NYVVQKIFELSSESQ 942
N+VV K + S+
Sbjct: 276 NFVVVKALRFTKMSR 290
Score = 43.5 bits (101), Expect = 0.008, Method: Composition-based stats.
Identities = 48/212 (22%), Positives = 88/212 (41%), Gaps = 3/212 (1%)
Query: 654 LSDITGHIVEFSADQHGSRFIQQKLENCSVDEKASVFKEILPHASKLMTDVFGNYVIQKF 713
L+ + + + + GSR +Q KL S D A IL + TD + +YV +
Sbjct: 77 LTSDSDYFMSIVTTKFGSRRVQ-KLLGKSDDVDAFFCAAILRRFLHITTDKYASYVTIRA 135
Query: 714 FEYGSPAQRKELANQLVGQILPLSMQMYGCRVIQKAL-ETIEIEQKAQLVRELDGQVMRC 772
+K L +++ L L+ +GC + + + + + QL+ + +R
Sbjct: 136 MVVFDKVMKKALYERILYHALDLACDQHGCIALNDIITDADDPYYRDQLLELVASNALRL 195
Query: 773 VRDQNGNHVIQKCIECIPPEKIGFIISAFCGQVAALSMHPYGCRVIQRVLEHCADKHQCQ 832
D +GN V+Q + I I GQ LS YG +++++LE
Sbjct: 196 SNDASGNFVVQHVLTLYDSRCIHNIAVNLYGQCIELSFKKYGSYIVEKLLEVEESMVVVV 255
Query: 833 FIVDEIL-DNVCALAQDQYGNYVTQHVLQRGK 863
+ D + LA++++GN+V L+ K
Sbjct: 256 VELLGCDGDRLMRLARNEFGNFVVVKALRFTK 287
>sp|Q9C552|PUM23_ARATH Pumilio homolog 23 OS=Arabidopsis thaliana GN=APUM23 PE=2 SV=1
Length = 753
Score = 40.4 bits (93), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 57/128 (44%), Gaps = 7/128 (5%)
Query: 810 MHPYGCRVIQRVLEHCADKHQ--CQFIVDEILDNVCALAQDQYGNYVTQHVL-QRGKPLE 866
MH GC ++Q + + +D Q + + + A+D G V + L +
Sbjct: 498 MHVMGCLILQGIFKFSSDHIQPYITSLTSMKAEYITETAKDSSGARVIEAFLASDAATKQ 557
Query: 867 RSKIIRKLSGHIVQLSQHKFASNVIEKCLAYGGPAERELIIEEILGHNEETLLTMMKDQF 926
+ ++I KL GH +LS H S +EKC RE I E+L + + + K +
Sbjct: 558 KRRLIIKLRGHFGELSLHTSGSFTVEKCFDACNLTLREAIASELL----DVKVDLSKTKQ 613
Query: 927 ANYVVQKI 934
Y+++K+
Sbjct: 614 GPYLLRKL 621
>sp|C5DQD7|NOP9_ZYGRC Nucleolar protein 9 OS=Zygosaccharomyces rouxii (strain ATCC 2623 /
CBS 732 / NBRC 1130 / NCYC 568 / NRRL Y-229) GN=NOP9
PE=3 SV=1
Length = 656
Score = 38.5 bits (88), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 20/111 (18%)
Query: 870 IIRKLSGHIVQLSQHKFASNVIEKCLAYGGP-AERELIIEEILGH-NEETLLTMMKDQFA 927
I + +G LS HK+AS+V+E L G E+EL+ G +EE+ +TM
Sbjct: 119 IFKAFNGVFYNLSCHKYASHVLETLLVRGAALVEKELLTPSFDGETDEESFITM------ 172
Query: 928 NYVVQKIFELSSESQQAMMLSRIRTHAHVLKKYTYGKHIVARFEMLIGEEN 978
E+ ML+ ++ H + + Y H++ +++ +N
Sbjct: 173 ------------ENVYLYMLNEVKPHLKAMINHRYASHVLRLLILILASKN 211
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.130 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 375,972,356
Number of Sequences: 539616
Number of extensions: 16932067
Number of successful extensions: 40214
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 226
Number of HSP's that attempted gapping in prelim test: 37577
Number of HSP's gapped (non-prelim): 1191
length of query: 983
length of database: 191,569,459
effective HSP length: 127
effective length of query: 856
effective length of database: 123,038,227
effective search space: 105320722312
effective search space used: 105320722312
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 66 (30.0 bits)