Query         042169
Match_columns 286
No_of_seqs    247 out of 1147
Neff          7.4 
Searched_HMMs 29240
Date          Mon Mar 25 05:30:49 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042169.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042169hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 2vk9_A Alpha-toxin; glycosyltr  99.4 8.2E-13 2.8E-17  126.4  10.9   40   35-76     96-135 (551)
  2 2bvl_A Toxin B; glycosyltransf  99.3 4.5E-12 1.5E-16  121.2   8.9   40   35-76     94-133 (543)
  3 4dmv_A Toxin A, TCDA; transfer  99.1 1.1E-10 3.8E-15  110.8   7.6   41   34-76    107-147 (556)
  4 3jsz_A LGT1, putative uncharac  96.7  0.0033 1.1E-07   57.7   7.0  117   36-159   132-252 (525)
  5 3tzt_A Glycosyl transferase fa  94.2   0.097 3.3E-06   46.3   7.0  111   37-167     4-122 (276)
  6 3u2u_A Glycogenin-1, GN-1, GN1  92.4    0.17 5.7E-06   44.7   5.4   57  149-208    99-157 (263)
  7 1ll2_A Glycogenin-1; protein-s  91.8    0.21 7.1E-06   45.5   5.5  130   55-207    20-155 (333)
  8 1g9r_A Glycosyl transferase; a  61.0     3.5 0.00012   36.6   2.0  135   55-207    16-179 (311)
  9 3bcv_A Putative glycosyltransf  18.1      71  0.0024   25.7   2.8   45   53-99     20-65  (240)
 10 1s3a_A NADH-ubiquinone oxidore  12.1      92  0.0032   22.6   1.7   38   36-74     21-60  (102)

No 1  
>2vk9_A Alpha-toxin; glycosyltransferase; 2.85A {Clostridium novyi} SCOP: c.68.1.22
Probab=99.40  E-value=8.2e-13  Score=126.45  Aligned_cols=40  Identities=10%  Similarity=0.169  Sum_probs=35.9

Q ss_pred             cceEEEEEEcCCCCCCCHHHHHHHHHHHHHCCCCeEEEEeCc
Q 042169           35 CATQFFMIWFSPARTFGPRDFLAVDTLMKANPQSCLVLISRS   76 (286)
Q Consensus        35 ~~~~i~~~W~s~~~~l~~r~~caIeS~~~~~P~~~V~l~~~~   76 (286)
                      .+..||+||+||.  +|..+.-||+||++++||++|++|.++
T Consensus        96 IPKiIHyiW~Gg~--~P~~~~~cI~sWkk~~PDYei~lW~D~  135 (551)
T 2vk9_A           96 ASKNLSFIWIGGP--ISDQSLEYYNMWKMFNKDYNIRLFYDK  135 (551)
T ss_dssp             CCSEEEEECCSSC--CCHHHHHHHHHHHHHCTTSEEEEEECT
T ss_pred             CCcceEEEEcCCC--CCHHHHHHHHHHHHHCcCCEEEEEecc
Confidence            6689999999998  578888779999999999999999864


No 2  
>2bvl_A Toxin B; glycosyltransferase; HET: GLC UDP TBR; 2.2A {Clostridium difficile} SCOP: c.68.1.22 PDB: 2bvm_A* 2vkh_A* 2vkd_A* 2vl8_A*
Probab=99.30  E-value=4.5e-12  Score=121.17  Aligned_cols=40  Identities=8%  Similarity=0.209  Sum_probs=35.8

Q ss_pred             cceEEEEEEcCCCCCCCHHHHHHHHHHHHHCCCCeEEEEeCc
Q 042169           35 CATQFFMIWFSPARTFGPRDFLAVDTLMKANPQSCLVLISRS   76 (286)
Q Consensus        35 ~~~~i~~~W~s~~~~l~~r~~caIeS~~~~~P~~~V~l~~~~   76 (286)
                      .+..||+||+||.  +|..+.-||+||++++||+++++|.++
T Consensus        94 IPKiIHyiW~Gg~--~P~~~~~cI~sWkk~~PDYei~lW~D~  133 (543)
T 2bvl_A           94 VEKNLHFVWIGGQ--INDTAINYINQWKDVNSDYNVNVFYDS  133 (543)
T ss_dssp             CCSEEEEECCSSC--CCHHHHHHHHHHHHHCTTSEEEEEECT
T ss_pred             CCCceEEEEeCCC--CCHHHHHHHHHHHHHCcCCEEEEEecc
Confidence            5788999999998  578888789999999999999999864


No 3  
>4dmv_A Toxin A, TCDA; transferase; 1.50A {Clostridium difficile} PDB: 4dmw_A* 3ss1_A 3srz_A
Probab=99.10  E-value=1.1e-10  Score=110.80  Aligned_cols=41  Identities=10%  Similarity=0.186  Sum_probs=35.9

Q ss_pred             CcceEEEEEEcCCCCCCCHHHHHHHHHHHHHCCCCeEEEEeCc
Q 042169           34 QCATQFFMIWFSPARTFGPRDFLAVDTLMKANPQSCLVLISRS   76 (286)
Q Consensus        34 ~~~~~i~~~W~s~~~~l~~r~~caIeS~~~~~P~~~V~l~~~~   76 (286)
                      ..+..||+||+||.  .|..+.-||+||++.+||++|++|.+.
T Consensus       107 ~IPKiIHy~W~Gg~--~P~~~~kcI~sWkk~~PDYeI~lW~Ds  147 (556)
T 4dmv_A          107 PVEKNLHFVWIGGE--VSDIALEYIKQWADINAEYNIKLWYDS  147 (556)
T ss_dssp             ECCSEEEEECCSSC--CCHHHHHHHHHHHHHCTTSEEEEEECT
T ss_pred             ccCCceEEEecCCC--CCHHHHHHHHHHHHHCCCCeEEEEeCc
Confidence            46788999999986  577777779999999999999999874


No 4  
>3jsz_A LGT1, putative uncharacterized protein; glucosyltransferase, legionnaire'S disease, legionella pneum transferase; HET: MSE UPG; 1.70A {Legionella pneumophila} PDB: 2wzg_A* 3jt1_A* 2wzf_A*
Probab=96.67  E-value=0.0033  Score=57.66  Aligned_cols=117  Identities=24%  Similarity=0.269  Sum_probs=75.8

Q ss_pred             ceEEEEEEcCCCC--CCCHHHHHHHHHHHHHCCCCeEEEE-eCccCCccccccchhhhhcCccEEEECCChhhhhccCch
Q 042169           36 ATQFFMIWFSPAR--TFGPRDFLAVDTLMKANPQSCLVLI-SRSLDTRRGYKILKPLLDRGFKILTVTPDLPSLVKDTPA  112 (286)
Q Consensus        36 ~~~i~~~W~s~~~--~l~~r~~caIeS~~~~~P~~~V~l~-~~~~~~~~~~~~~~~l~~~~~~v~~~~~d~~~~~~~tP~  112 (286)
                      .+..+=+|+|..+  ..|..++-.++-++.+||+.++.++ +.+.-+..+..-+++|.+. .++..+.+|  +.-.+.++
T Consensus       132 tn~~~~IWFSn~P~~fMp~e~q~~Lle~re~nPG~~i~LVYsStlLn~~a~~ql~~fake-n~IsllDid--s~k~e~~L  208 (525)
T 3jsz_A          132 TNVQTSIWFSIKPELFMPSKQQEALKRRREQYPGCKIRLIYSSSLLNPEANRQMKAFAKK-QNISLIDID--SVKTDSPL  208 (525)
T ss_dssp             SSEEEEECCCSSTTCSSCHHHHHHHHHHHHHCTTCEEEEEECSTTSCHHHHHHHHHHHHH-TTEEEEEGG--GCCCCCTH
T ss_pred             CCceEEEEEeCChhHhccHHHHHHHHHHHhhCCCCeEEEEeehhhcCHHHHHHHHHHHHh-cCceEeehh--hhcchHHH
Confidence            3455678999876  3677788888889999999877555 4443333333334555553 367766444  43367788


Q ss_pred             HHHHHhhhcCccCCCCCCchhhhHhHHHHHH-HHHhCcEEEeCCeeee
Q 042169          113 EAWLKKIKNGKIDPGKNPLSIHLSDLIRLAV-LYKYGGVYLDTDFVIL  159 (286)
Q Consensus       113 ~~w~~~~~~g~~~~~~~~~~a~~SD~~R~~l-L~~~GGiYlD~Dv~~~  159 (286)
                      ...++.=.+..-.++.   .|..||++|..- +|.+ |.|.|.|+=+-
T Consensus       209 ynl~k~EL~nLg~GGN---pAaASDivRWlspv~~~-gtYtDfD~PvD  252 (525)
T 3jsz_A          209 YPLIKAELANLGMGGN---PAAASDLCRWIPELFNE-GFYVDIDLPVD  252 (525)
T ss_dssp             HHHHHHHHHTTTTTCC---HHHHHHHHTTCTTTCSS-EEEECTTCCBC
T ss_pred             HHHHHHHHHhccCCCC---HHHHHHHHHhhHHhccc-Cceeeeecccc
Confidence            8887762211112333   589999999764 4444 99999998443


No 5  
>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0
Probab=94.21  E-value=0.097  Score=46.33  Aligned_cols=111  Identities=14%  Similarity=0.130  Sum_probs=60.7

Q ss_pred             eEEEEEEcCCCCCCCHHHHHHHHHHHHHCCCC--eEEEEeCccCCccccccchhhhh-cCccEEEECCChhhhhccCchH
Q 042169           37 TQFFMIWFSPARTFGPRDFLAVDTLMKANPQS--CLVLISRSLDTRRGYKILKPLLD-RGFKILTVTPDLPSLVKDTPAE  113 (286)
Q Consensus        37 ~~i~~~W~s~~~~l~~r~~caIeS~~~~~P~~--~V~l~~~~~~~~~~~~~~~~l~~-~~~~v~~~~~d~~~~~~~tP~~  113 (286)
                      +.||.+=.++..-+.. -..++.|..+++++.  .+.+++++.+.. ....++.+.+ .+.+|.++.++-. .+++.|. 
T Consensus         4 m~i~I~~~~d~~Y~~~-~~v~i~Sl~~~~~~~~~~~~il~~~is~~-~~~~L~~~~~~~~~~i~~~~~~~~-~~~~~~~-   79 (276)
T 3tzt_A            4 MADALLLTLDENYIPQ-MKVLMTSIYINNPGRIFDVYLIHSRISED-KLKDLGEDLKKFSYTLYPIRATDD-LFSFAKV-   79 (276)
T ss_dssp             -CEEEEEECCGGGHHH-HHHHHHHHHHHSTTCCEEEEEEESCCCHH-HHHHHHHHHHTTTCEEEEEECC-----------
T ss_pred             eeEEEEEEeCHhHHHH-HHHHHHHHHHhCCCCceEEEEEeCCCCHH-HHHHHHHHHHHcCCEEEEEEeCHH-HHhcCcc-
Confidence            4577775555544433 456699999999964  455666654321 1122333333 2345666655431 2222110 


Q ss_pred             HHHHhhhcCccCCCCCCchhhhHhHHHHHHHHHh----C-cEEEeCCeeeeccchhhhh
Q 042169          114 AWLKKIKNGKIDPGKNPLSIHLSDLIRLAVLYKY----G-GVYLDTDFVILKDFKGLRN  167 (286)
Q Consensus       114 ~w~~~~~~g~~~~~~~~~~a~~SD~~R~~lL~~~----G-GiYlD~Dv~~~rpl~~l~~  167 (286)
                             +.     .    -..+-+.|+.+-.-.    . =+|+|+|+++++++++|.+
T Consensus        80 -------~~-----~----~s~~~~~rl~~~~l~p~~~~kvlylD~D~iv~~di~~L~~  122 (276)
T 3tzt_A           80 -------TD-----R----YPKEMYYRLLAGEFLPENLGEILYLDPDMLVINPLDDLLR  122 (276)
T ss_dssp             --------------------CHHHHHHHTHHHHSCTTCCEEEEECSSEEECSCSHHHHT
T ss_pred             -------cc-----c----cCHHHHHHHHHHHHcccccCeEEEEeCCeeecCCHHHHhh
Confidence                   00     1    124567888766443    3 4999999999999998754


No 6  
>3u2u_A Glycogenin-1, GN-1, GN1; structural genomics, structural genomics consortium, SGC, transferase, glycosyltransferase, glycogen biosynthesis; HET: GLC UDP; 1.45A {Homo sapiens} SCOP: c.68.1.14 PDB: 3t7n_A* 3t7o_A* 3t7m_A* 3u2v_A* 3u2x_A* 3u2t_A 3rmv_A* 3rmw_A* 3u2w_A* 3qvb_A* 3q4s_A* 1zct_A* 3v8y_A 3v8z_A* 3usr_A 3v90_A 3v91_A* 3usq_A
Probab=92.37  E-value=0.17  Score=44.70  Aligned_cols=57  Identities=16%  Similarity=0.222  Sum_probs=42.5

Q ss_pred             cEEEeCCeeeeccchhhhhh--hccccccccCCCcccccceEEEeeCCCHHHHHHHHHHHHh
Q 042169          149 GVYLDTDFVILKDFKGLRNA--IGAQGVDQVTHKWTTLNGAAMVFDKRHPILFDFLQEFTTT  208 (286)
Q Consensus       149 GiYlD~Dv~~~rpl~~l~~~--~~~~~~~~~~~~~~~l~n~~~~~~~~hp~l~~~l~~~~~~  208 (286)
                      =+|+|+|++++++++++.+.  ++....   .+-...+|.|+|...|......++++.+.+.
T Consensus        99 vlylD~D~~v~~~~~~Lf~~~~~aA~~d---~~~~~~fNsGv~li~p~~~~~~~l~~~~~~~  157 (263)
T 3u2u_A           99 CVFMDADTLVLANIDDLFDREELSAAPD---PGWPDCFNSGVFVYQPSVETYNQLLHLASEQ  157 (263)
T ss_dssp             EEEECTTEEECSCCGGGGGSCSSEEEEC---TTSTTSEEEEEEEECCCHHHHHHHHHHHHHH
T ss_pred             EEEEcCCEeeccCHHHHhCCCcceEecc---CCCCccccCeEEEEcccHHHHHHHHHHHHhc
Confidence            69999999999999998653  222211   1112568999999999988888888887753


No 7  
>1ll2_A Glycogenin-1; protein-substrate complex, beta-alpha-beta rossman-like NUCL binding fold, DXD motif, non-proline CIS peptide bond, TRAN; HET: UPG; 1.90A {Oryctolagus cuniculus} SCOP: c.68.1.14 PDB: 1ll3_A 1ll0_A 1zcv_A 1zcu_A 1zdf_A* 1zcy_A 1zdg_A*
Probab=91.76  E-value=0.21  Score=45.51  Aligned_cols=130  Identities=16%  Similarity=0.157  Sum_probs=71.9

Q ss_pred             HHHHHHHHHHCCCCeEEEE-eCccCCccccccchhhhhcCccEEEECCChhhhhccCchHHHHHhhhcCccCCCCCCchh
Q 042169           55 FLAVDTLMKANPQSCLVLI-SRSLDTRRGYKILKPLLDRGFKILTVTPDLPSLVKDTPAEAWLKKIKNGKIDPGKNPLSI  133 (286)
Q Consensus        55 ~caIeS~~~~~P~~~V~l~-~~~~~~~~~~~~~~~l~~~~~~v~~~~~d~~~~~~~tP~~~w~~~~~~g~~~~~~~~~~a  133 (286)
                      ..++.|..+++++..++++ +++.+.    ...+.|.+.+..|..+.+ +..-   .+ ..+ ....+.          .
T Consensus        20 ~vl~~SL~~~~s~~~l~vlv~~~is~----~~~~~L~~~~~~v~~v~~-l~~~---~~-~~~-~~~~~~----------~   79 (333)
T 1ll2_A           20 LVLGSSLKQHRTSRRLAVLTTPQVSD----TMRKALEIVFDEVITVDI-LDSG---DS-AHL-TLMKRP----------E   79 (333)
T ss_dssp             HHHHHHHHHTTCCSEEEEEECTTSCH----HHHHHHHHHCSEEEECCT-TSTT---ST-THH-HHHHCG----------G
T ss_pred             HHHHHHHHHhCCCCCEEEEEcCCCCH----HHHHHHHHhCCEEEEEee-cCCc---ch-hhc-cccccc----------c
Confidence            3458999999999988665 333211    122233333445554432 1100   01 000 000000          0


Q ss_pred             hhHhHHHHHHHH--HhC-cEEEeCCeeeeccchhhhhh--hccccccccCCCcccccceEEEeeCCCHHHHHHHHHHHH
Q 042169          134 HLSDLIRLAVLY--KYG-GVYLDTDFVILKDFKGLRNA--IGAQGVDQVTHKWTTLNGAAMVFDKRHPILFDFLQEFTT  207 (286)
Q Consensus       134 ~~SD~~R~~lL~--~~G-GiYlD~Dv~~~rpl~~l~~~--~~~~~~~~~~~~~~~l~n~~~~~~~~hp~l~~~l~~~~~  207 (286)
                      ...=+.|+.+..  .|. =+|||+|+++++++++|.+.  ++.-..   .+-...+|+|||...|.......+++.+.+
T Consensus        80 ~~~t~~Kl~i~~l~~ydrvlYLDaD~lv~~di~eLf~~~~~aAv~d---~~~~~~fNsGvmlin~~~~~~~~l~~~~~~  155 (333)
T 1ll2_A           80 LGVTLTKLHCWSLTQYSKCVFMDADTLVLANIDDLFEREELSAAPD---PGWPDCFNSGVFVYQPSVETYNQLLHVASE  155 (333)
T ss_dssp             GHHHHHHGGGGGCTTCSEEEEECTTEEECSCCGGGGGSCSSEEEEC---SSSTTSEEEEEEEECCCHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHhHhcCCCeEEEEeCCEEeccCHHHHhCCCceeEEec---CCCCcceeeeEEEEeCCHHHHHHHHHHHHh
Confidence            123355555442  222 39999999999999998753  222111   111257899999999988888888877664


No 8  
>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A*
Probab=61.02  E-value=3.5  Score=36.59  Aligned_cols=135  Identities=13%  Similarity=0.105  Sum_probs=68.1

Q ss_pred             HHHHHHH-HHHCC-CCeEEEEeCccCCccccccchhhhhc-CccEEEECCChhhhhccCchHHHHHhhhcCccCCCCCCc
Q 042169           55 FLAVDTL-MKANP-QSCLVLISRSLDTRRGYKILKPLLDR-GFKILTVTPDLPSLVKDTPAEAWLKKIKNGKIDPGKNPL  131 (286)
Q Consensus        55 ~caIeS~-~~~~P-~~~V~l~~~~~~~~~~~~~~~~l~~~-~~~v~~~~~d~~~~~~~tP~~~w~~~~~~g~~~~~~~~~  131 (286)
                      ..++.|+ .++++ +..+.+++++.+. .....++.+.+. +.+|.++.++... +.+.|..       .+     .+  
T Consensus        16 ~vli~Sl~l~~~~~~~~f~il~~~ls~-~~~~~L~~~~~~~~~~i~~~~~~~~~-~~~~~~~-------~~-----~~--   79 (311)
T 1g9r_A           16 CVAAKSVEAAHPDTEIRFHVLDAGISE-ANRAAVAANLRGGGGNIRFIDVNPED-FAGFPLN-------IR-----HI--   79 (311)
T ss_dssp             HHHHHHHHHTCTTSCCEEEEEESSCCH-HHHHHHHHHSGGGTTTEEEEECCGGG-GTTSCCC-------CT-----TC--
T ss_pred             HHHHHHHHHHcCCCCceEEEEECCCCH-HHHHHHHHHHHHcCCEEEEEEcCHHH-HhcCccc-------cc-----cC--
Confidence            4568999 44443 3456667665422 111223333322 4567766655432 2222210       00     11  


Q ss_pred             hhhhHhHHHHHHHHHhC----cEEEeCCeeeeccchhhhhh------hccccccc-----------c-CCCcccccceEE
Q 042169          132 SIHLSDLIRLAVLYKYG----GVYLDTDFVILKDFKGLRNA------IGAQGVDQ-----------V-THKWTTLNGAAM  189 (286)
Q Consensus       132 ~a~~SD~~R~~lL~~~G----GiYlD~Dv~~~rpl~~l~~~------~~~~~~~~-----------~-~~~~~~l~n~~~  189 (286)
                        ..+=+.|+.+-.-..    =+|||+|+++++++++|.+.      +++.....           + ......+|+|||
T Consensus        80 --s~~~y~Rl~l~~ll~~~~kvlyLD~D~iv~~di~eL~~~~l~~~~~aav~d~~~~~~~~~~~~~~~~~~~~yfNsGv~  157 (311)
T 1g9r_A           80 --SITTYARLKLGEYIADCDKVLYLDIDVLVRDSLTPLWDTDLGDNWLGASIDLFVERQEGYKQKIGMADGEYYFNAGVL  157 (311)
T ss_dssp             --CGGGGGGGGHHHHCCSCSCEEEECSSEEECSCCHHHHTCCCTTCSEEEEECHHHHTSTTHHHHTTCCTTSCCEEEEEE
T ss_pred             --CHHHHHHHHHHHHhhhcCEEEEEcCCeEeccCHHHHhccCCCCcEEEEEeccchhhhHHHHHhcCCCCCCceEeeeee
Confidence              123344555433233    39999999999999997642      22211100           0 011247889999


Q ss_pred             EeeCC----CHHHHHHHHHHHH
Q 042169          190 VFDKR----HPILFDFLQEFTT  207 (286)
Q Consensus       190 ~~~~~----hp~l~~~l~~~~~  207 (286)
                      ...+.    ..+...+++.+.+
T Consensus       158 linl~~~r~~~~~~~~~~~~~~  179 (311)
T 1g9r_A          158 LINLKKWRRHDIFKMSSEWVEQ  179 (311)
T ss_dssp             EECHHHHTTSCHHHHHHHHHHH
T ss_pred             eeeHHHHHhcchHHHHHHHHHh
Confidence            88753    3445556655554


No 9  
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=18.12  E-value=71  Score=25.72  Aligned_cols=45  Identities=18%  Similarity=0.098  Sum_probs=28.4

Q ss_pred             HHHHHHHHHHHH-CCCCeEEEEeCccCCccccccchhhhhcCccEEEE
Q 042169           53 RDFLAVDTLMKA-NPQSCLVLISRSLDTRRGYKILKPLLDRGFKILTV   99 (286)
Q Consensus        53 r~~caIeS~~~~-~P~~~V~l~~~~~~~~~~~~~~~~l~~~~~~v~~~   99 (286)
                      ...| ++|+.++ .|+++|+|+.++.. +...++++.+.+++.+|.++
T Consensus        20 l~~~-l~Sl~~q~~~~~eiIvvDd~S~-d~t~~~~~~~~~~~~~i~~i   65 (240)
T 3bcv_A           20 LDQC-VQALLAQTLSDIEIILIDDESP-DNCPKICDDYAAQYPNIKVI   65 (240)
T ss_dssp             HHHH-HHHHHTCSSSSEEEEEEECCCS-SSHHHHHHHHHHHCSSEEEE
T ss_pred             HHHH-HHHHHhCcCCCeEEEEEECCCC-cCHHHHHHHHHhhCCCEEEE
Confidence            4455 9999765 57889999977532 22234555565555666655


No 10 
>1s3a_A NADH-ubiquinone oxidoreductase B8 subunit; CI-B8, ndufa2, complex I; NMR {Homo sapiens} SCOP: c.47.1.22
Probab=12.12  E-value=92  Score=22.64  Aligned_cols=38  Identities=26%  Similarity=0.257  Sum_probs=27.8

Q ss_pred             ceEEEEEEcCCCCCCCHHH--HHHHHHHHHHCCCCeEEEEe
Q 042169           36 ATQFFMIWFSPARTFGPRD--FLAVDTLMKANPQSCLVLIS   74 (286)
Q Consensus        36 ~~~i~~~W~s~~~~l~~r~--~caIeS~~~~~P~~~V~l~~   74 (286)
                      +.+|++|=++|.. -+.|+  ...+..+++.||+..|.+-.
T Consensus        21 ~l~~~yc~~~~sS-~G~R~Fl~~~l~~~k~~NP~v~i~v~~   60 (102)
T 1s3a_A           21 EIRIHLCQRSPGS-QGVRDFIEKRYVELKKANPDLPILIRE   60 (102)
T ss_dssp             EEEEECCSSSCCC-HHHHHHHHHTHHHHHHHSTTCCEEEEC
T ss_pred             EEEEEEcCCCCCc-hhHHHHHHHhhHHHHHHCCCceEEEEE
Confidence            5689999888853 22232  45688899999999988753


Done!