Query 042170
Match_columns 543
No_of_seqs 296 out of 907
Neff 6.3
Searched_HMMs 46136
Date Fri Mar 29 03:30:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042170.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/042170hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02499 glycerol-3-phosphate 100.0 2E-126 4E-131 1014.0 48.3 472 58-541 3-481 (498)
2 PLN02588 glycerol-3-phosphate 100.0 3E-125 7E-130 1001.0 47.6 508 5-540 6-525 (525)
3 PLN02177 glycerol-3-phosphate 100.0 2E-119 3E-124 978.7 50.4 478 50-542 8-495 (497)
4 TIGR01545 YfhB_g-proteo haloac 100.0 8.4E-31 1.8E-35 257.0 18.1 183 62-254 4-205 (210)
5 cd07991 LPLAT_LPCAT1-like Lyso 100.0 3.4E-30 7.3E-35 252.3 13.9 190 321-527 9-211 (211)
6 PLN02833 glycerol acyltransfer 99.9 4.6E-26 1E-30 240.4 22.5 189 315-522 142-345 (376)
7 TIGR01490 HAD-SF-IB-hyp1 HAD-s 99.9 4.6E-26 1E-30 219.6 17.2 184 65-253 1-200 (202)
8 PRK11590 hypothetical protein; 99.9 1E-25 2.2E-30 220.6 18.2 181 62-253 5-205 (211)
9 PRK15018 1-acyl-sn-glycerol-3- 99.9 2.6E-24 5.6E-29 215.9 22.0 175 313-514 41-229 (245)
10 KOG2848 1-acyl-sn-glycerol-3-p 99.9 8.7E-25 1.9E-29 214.4 15.4 181 311-516 63-257 (276)
11 PLN02901 1-acyl-sn-glycerol-3- 99.9 1.3E-21 2.8E-26 192.4 12.6 168 320-516 32-212 (214)
12 COG0560 SerB Phosphoserine pho 99.9 2.8E-21 6.1E-26 190.0 13.0 174 62-253 4-189 (212)
13 cd07992 LPLAT_AAK14816-like Ly 99.8 3.4E-20 7.4E-25 180.4 16.1 173 311-514 2-202 (203)
14 PTZ00261 acyltransferase; Prov 99.8 8.3E-20 1.8E-24 189.6 16.3 153 346-515 128-308 (355)
15 PRK06814 acylglycerophosphoeth 99.8 1.1E-18 2.3E-23 208.0 21.8 176 321-514 437-623 (1140)
16 cd07988 LPLAT_ABO13168-like Ly 99.8 1.9E-19 4.2E-24 169.9 11.5 132 315-488 2-147 (163)
17 PRK08633 2-acyl-glycerophospho 99.8 2E-18 4.4E-23 204.9 21.8 181 308-511 409-604 (1146)
18 cd07986 LPLAT_ACT14924-like Ly 99.8 3.5E-19 7.5E-24 174.5 11.9 174 321-509 4-208 (210)
19 COG0204 PlsC 1-acyl-sn-glycero 99.8 1.5E-18 3.2E-23 172.2 16.5 152 312-489 39-205 (255)
20 PRK08043 bifunctional acyl-[ac 99.8 3.6E-18 7.9E-23 194.8 18.2 176 323-516 14-199 (718)
21 cd07993 LPLAT_DHAPAT-like Lyso 99.7 2.8E-18 6E-23 167.5 9.0 142 346-488 21-200 (205)
22 cd07987 LPLAT_MGAT-like Lysoph 99.7 2.1E-17 4.6E-22 161.6 11.9 175 324-514 6-207 (212)
23 cd06551 LPLAT Lysophospholipid 99.7 9.7E-17 2.1E-21 152.5 15.8 162 320-514 9-186 (187)
24 PLN02783 diacylglycerol O-acyl 99.7 5.9E-17 1.3E-21 168.2 13.0 161 313-490 77-274 (315)
25 PRK14014 putative acyltransfer 99.7 4.3E-15 9.4E-20 153.5 19.6 123 319-451 69-232 (301)
26 TIGR00530 AGP_acyltrn 1-acyl-s 99.7 6.3E-16 1.4E-20 138.2 11.2 116 322-447 1-129 (130)
27 PF01553 Acyltransferase: Acyl 99.6 8.9E-17 1.9E-21 144.0 3.1 115 324-448 1-132 (132)
28 PRK03355 glycerol-3-phosphate 99.6 1E-15 2.2E-20 173.7 12.1 186 322-514 249-483 (783)
29 PF12710 HAD: haloacid dehalog 99.6 3.1E-14 6.7E-19 135.3 13.3 107 122-238 64-190 (192)
30 cd07985 LPLAT_GPAT Lysophospho 99.6 3.4E-14 7.4E-19 140.7 13.1 162 346-514 21-232 (235)
31 cd07983 LPLAT_DUF374-like Lyso 99.6 4.1E-14 8.8E-19 135.8 13.2 171 320-514 5-187 (189)
32 cd07989 LPLAT_AGPAT-like Lysop 99.5 2.8E-14 6E-19 135.4 11.6 162 321-505 8-182 (184)
33 TIGR01488 HAD-SF-IB Haloacid D 99.5 5.1E-14 1.1E-18 132.4 10.6 163 65-243 1-177 (177)
34 TIGR03703 plsB glycerol-3-phos 99.5 6.8E-14 1.5E-18 160.0 13.5 160 324-490 275-471 (799)
35 TIGR02137 HSK-PSP phosphoserin 99.5 1.2E-13 2.6E-18 135.1 12.8 165 64-253 2-173 (203)
36 PRK04974 glycerol-3-phosphate 99.5 6.3E-14 1.4E-18 160.4 12.5 189 325-519 286-529 (818)
37 PRK08238 hypothetical protein; 99.5 1.5E-13 3.3E-18 150.1 13.4 162 63-262 10-184 (479)
38 smart00563 PlsC Phosphate acyl 99.4 5.2E-13 1.1E-17 116.4 9.3 101 349-449 1-117 (118)
39 cd07990 LPLAT_LCLAT1-like Lyso 99.4 6.6E-13 1.4E-17 128.3 7.8 102 320-431 7-124 (193)
40 PLN02510 probable 1-acyl-sn-gl 99.3 1.8E-11 3.9E-16 129.9 16.0 117 320-447 76-208 (374)
41 TIGR03333 salvage_mtnX 2-hydro 99.3 2.9E-11 6.2E-16 118.6 13.6 168 66-250 2-182 (214)
42 PRK11915 glycerol-3-phosphate 99.3 4.5E-12 9.7E-17 140.5 8.6 175 346-520 114-332 (621)
43 PTZ00374 dihydroxyacetone phos 99.3 1.3E-11 2.7E-16 140.9 12.0 145 346-490 628-812 (1108)
44 TIGR01491 HAD-SF-IB-PSPlk HAD- 99.3 7.1E-11 1.5E-15 113.1 14.9 102 147-253 81-192 (201)
45 PRK11133 serB phosphoserine ph 99.3 5.6E-11 1.2E-15 124.1 15.1 174 62-253 109-293 (322)
46 TIGR00338 serB phosphoserine p 99.2 1.2E-10 2.5E-15 113.8 14.1 170 63-253 14-197 (219)
47 PLN02380 1-acyl-sn-glycerol-3- 99.2 9E-11 2E-15 124.6 13.5 104 319-429 63-182 (376)
48 cd07984 LPLAT_LABLAT-like Lyso 99.2 1.4E-10 3E-15 110.9 12.6 159 324-518 3-181 (192)
49 PRK09552 mtnX 2-hydroxy-3-keto 98.9 1E-08 2.3E-13 100.8 12.8 110 147-260 75-200 (219)
50 KOG4666 Predicted phosphate ac 98.9 1.6E-09 3.5E-14 110.0 4.2 173 352-532 12-197 (412)
51 PLN02954 phosphoserine phospha 98.8 3.8E-08 8.2E-13 96.5 12.7 98 147-249 85-194 (224)
52 PRK13582 thrH phosphoserine ph 98.8 7.8E-08 1.7E-12 92.8 12.0 115 124-252 52-172 (205)
53 KOG2898 Predicted phosphate ac 98.7 5E-08 1.1E-12 102.1 9.0 163 347-521 137-319 (354)
54 TIGR01489 DKMTPPase-SF 2,3-dik 98.5 1.6E-06 3.5E-11 82.0 14.0 112 125-248 57-186 (188)
55 KOG2847 Phosphate acyltransfer 98.3 1.3E-06 2.8E-11 86.6 5.8 139 345-489 67-225 (286)
56 TIGR01544 HAD-SF-IE haloacid d 98.1 2.7E-05 5.7E-10 79.9 11.2 165 63-243 22-230 (277)
57 KOG1505 Lysophosphatidic acid 98.0 3.2E-05 7E-10 81.6 9.7 77 346-422 70-162 (346)
58 TIGR01449 PGP_bact 2-phosphogl 97.9 5.3E-05 1.2E-09 73.3 10.1 91 147-249 86-183 (213)
59 PRK10826 2-deoxyglucose-6-phos 97.9 0.00021 4.5E-09 70.1 14.2 92 147-250 93-191 (222)
60 KOG1615 Phosphoserine phosphat 97.9 7.4E-05 1.6E-09 72.1 9.3 88 147-238 89-188 (227)
61 cd01427 HAD_like Haloacid deha 97.9 4.2E-05 9E-10 66.9 7.1 88 152-244 33-133 (139)
62 PRK13222 phosphoglycolate phos 97.8 0.00019 4.1E-09 70.0 11.3 91 147-249 94-191 (226)
63 COG2937 PlsB Glycerol-3-phosph 97.8 3.9E-05 8.5E-10 85.6 7.1 175 346-520 295-524 (810)
64 PRK08419 lipid A biosynthesis 97.7 0.00029 6.3E-09 72.8 11.3 135 324-489 96-250 (298)
65 KOG3729 Mitochondrial glycerol 97.6 0.00016 3.4E-09 78.5 7.6 143 346-488 157-342 (715)
66 PRK13226 phosphoglycolate phos 97.5 0.0016 3.6E-08 64.5 13.6 90 147-248 96-192 (229)
67 PRK13223 phosphoglycolate phos 97.5 0.0012 2.7E-08 67.4 13.0 87 147-245 102-195 (272)
68 TIGR02253 CTE7 HAD superfamily 97.4 0.0043 9.3E-08 60.4 14.9 87 147-245 95-189 (221)
69 COG0546 Gph Predicted phosphat 97.3 0.0028 6.1E-08 62.5 12.3 163 63-246 4-184 (220)
70 TIGR02009 PGMB-YQAB-SF beta-ph 97.3 0.0025 5.5E-08 60.1 11.4 74 147-236 89-173 (185)
71 KOG3730 Acyl-CoA:dihydroxyacte 97.3 0.00042 9E-09 74.3 6.4 106 346-451 149-282 (685)
72 PRK10725 fructose-1-P/6-phosph 97.3 0.0031 6.7E-08 59.8 11.9 74 150-236 94-173 (188)
73 TIGR01548 HAD-SF-IA-hyp1 haloa 97.3 0.0038 8.2E-08 60.2 12.5 78 149-236 112-192 (197)
74 TIGR01509 HAD-SF-IA-v3 haloaci 97.3 0.002 4.3E-08 60.4 10.0 79 147-236 86-171 (183)
75 PF06888 Put_Phosphatase: Puta 97.2 0.009 1.9E-07 60.1 14.6 153 65-236 2-183 (234)
76 PRK13288 pyrophosphatase PpaX; 97.2 0.0039 8.5E-08 60.7 11.8 90 147-248 83-179 (214)
77 TIGR01422 phosphonatase phosph 97.2 0.0068 1.5E-07 60.7 13.8 87 147-244 100-194 (253)
78 PLN02770 haloacid dehalogenase 97.2 0.0023 4.9E-08 64.3 10.2 89 147-247 109-204 (248)
79 PRK07920 lipid A biosynthesis 97.1 0.0065 1.4E-07 62.9 13.2 155 324-513 89-266 (298)
80 TIGR01428 HAD_type_II 2-haloal 97.1 0.0054 1.2E-07 58.9 11.2 80 147-236 93-179 (198)
81 TIGR03351 PhnX-like phosphonat 97.1 0.0098 2.1E-07 58.0 13.0 165 64-247 2-186 (220)
82 PRK10563 6-phosphogluconate ph 96.9 0.0083 1.8E-07 58.6 11.3 167 64-247 5-182 (221)
83 TIGR02254 YjjG/YfnB HAD superf 96.9 0.02 4.4E-07 55.5 13.5 87 147-245 98-192 (224)
84 PRK13478 phosphonoacetaldehyde 96.9 0.02 4.2E-07 58.1 13.8 89 147-246 102-198 (267)
85 PHA02597 30.2 hypothetical pro 96.8 0.0092 2E-07 57.3 10.1 82 147-236 75-159 (197)
86 PLN03243 haloacid dehalogenase 96.8 0.023 5.1E-07 57.8 13.4 88 147-246 110-204 (260)
87 TIGR01993 Pyr-5-nucltdase pyri 96.7 0.058 1.3E-06 51.2 15.1 80 147-236 85-172 (184)
88 TIGR02252 DREG-2 REG-2-like, H 96.7 0.033 7.2E-07 53.5 13.6 79 147-236 106-192 (203)
89 PRK11587 putative phosphatase; 96.7 0.021 4.5E-07 56.0 12.2 166 64-250 4-182 (218)
90 PRK13225 phosphoglycolate phos 96.7 0.018 4E-07 59.0 12.0 86 147-246 143-234 (273)
91 TIGR01990 bPGM beta-phosphoglu 96.6 0.024 5.1E-07 53.4 11.2 78 147-236 88-172 (185)
92 PLN02940 riboflavin kinase 96.6 0.021 4.6E-07 61.3 12.1 37 476-516 326-362 (382)
93 TIGR01672 AphA HAD superfamily 96.5 0.0094 2E-07 60.0 8.2 99 149-263 120-224 (237)
94 PLN02575 haloacid dehalogenase 96.4 0.048 1E-06 58.6 13.5 83 147-245 217-310 (381)
95 PRK09456 ?-D-glucose-1-phospha 96.3 0.1 2.2E-06 50.3 13.7 81 147-236 85-172 (199)
96 TIGR01454 AHBA_synth_RP 3-amin 96.2 0.04 8.6E-07 53.2 10.8 90 147-248 76-172 (205)
97 PRK06698 bifunctional 5'-methy 96.1 0.047 1E-06 59.9 12.0 88 147-246 331-422 (459)
98 PRK09449 dUMP phosphatase; Pro 96.1 0.09 2E-06 51.3 12.8 88 147-246 96-191 (224)
99 TIGR01493 HAD-SF-IA-v2 Haloaci 96.1 0.028 6.2E-07 52.6 8.8 77 147-236 91-170 (175)
100 PLN02919 haloacid dehalogenase 96.0 0.071 1.5E-06 64.5 13.5 81 147-236 162-249 (1057)
101 PRK14988 GMP/IMP nucleotidase; 96.0 0.14 3E-06 50.8 13.4 84 147-246 94-188 (224)
102 PF13419 HAD_2: Haloacid dehal 95.9 0.049 1.1E-06 49.8 9.4 76 147-236 78-164 (176)
103 PLN02349 glycerol-3-phosphate 95.9 0.01 2.2E-07 63.2 5.1 160 347-513 201-411 (426)
104 COG0561 Cof Predicted hydrolas 95.7 0.0076 1.6E-07 60.7 3.1 41 208-252 188-233 (264)
105 PRK12702 mannosyl-3-phosphogly 95.6 0.066 1.4E-06 55.6 9.6 92 160-258 150-259 (302)
106 PLN02779 haloacid dehalogenase 95.5 0.25 5.4E-06 50.9 13.7 93 147-249 145-244 (286)
107 COG1560 HtrB Lauroyl/myristoyl 95.5 0.096 2.1E-06 54.8 10.7 161 324-518 106-286 (308)
108 TIGR01670 YrbI-phosphatas 3-de 95.4 0.066 1.4E-06 50.0 8.2 83 151-253 36-121 (154)
109 COG4359 Uncharacterized conser 95.2 0.28 6.1E-06 47.5 11.6 101 152-256 82-195 (220)
110 COG1011 Predicted hydrolase (H 95.0 0.55 1.2E-05 45.6 13.5 73 146-229 99-180 (229)
111 TIGR01497 kdpB K+-transporting 94.7 0.093 2E-06 60.4 8.4 84 146-251 446-535 (675)
112 PRK10671 copA copper exporting 94.5 0.12 2.6E-06 61.1 8.9 85 146-251 650-739 (834)
113 PF03279 Lip_A_acyltrans: Bact 94.4 0.33 7.1E-06 49.9 10.9 158 322-514 102-279 (295)
114 TIGR01549 HAD-SF-IA-v1 haloaci 94.4 0.34 7.4E-06 44.3 10.0 74 150-236 71-148 (154)
115 PRK10748 flavin mononucleotide 94.4 1.2 2.7E-05 44.2 14.6 18 64-81 11-28 (238)
116 COG0637 Predicted phosphatase/ 93.9 0.42 9E-06 47.3 10.1 36 147-183 87-126 (221)
117 PRK09484 3-deoxy-D-manno-octul 93.7 0.26 5.7E-06 47.3 8.0 81 151-251 56-139 (183)
118 COG2121 Uncharacterized protei 93.7 1.9 4.1E-05 42.5 13.6 148 346-509 45-203 (214)
119 PRK06628 lipid A biosynthesis 93.4 1.2 2.6E-05 46.0 12.7 133 324-489 99-250 (290)
120 TIGR01511 ATPase-IB1_Cu copper 93.3 0.2 4.3E-06 56.7 7.4 84 145-251 404-493 (562)
121 KOG3120 Predicted haloacid deh 93.1 0.76 1.6E-05 45.8 10.0 171 61-249 11-208 (256)
122 PRK06553 lipid A biosynthesis 92.8 1.6 3.4E-05 45.5 12.7 134 324-488 116-268 (308)
123 PRK11009 aphA acid phosphatase 92.4 0.51 1.1E-05 47.6 8.1 69 152-236 123-198 (237)
124 TIGR01487 SPP-like sucrose-pho 92.1 0.33 7.1E-06 47.3 6.2 16 64-79 2-17 (215)
125 PRK08905 lipid A biosynthesis 91.9 2.7 5.8E-05 43.4 12.9 139 346-513 100-257 (289)
126 TIGR02726 phenyl_P_delta pheny 91.0 1.1 2.4E-05 42.8 8.3 83 151-253 42-127 (169)
127 PRK06946 lipid A biosynthesis 90.9 2.8 6.1E-05 43.3 12.0 133 324-488 94-247 (293)
128 TIGR02247 HAD-1A3-hyp Epoxide 90.9 2 4.2E-05 41.5 10.2 16 64-79 3-18 (211)
129 PRK10530 pyridoxal phosphate ( 90.7 1.3 2.8E-05 44.4 9.0 61 154-220 31-99 (272)
130 PRK10513 sugar phosphate phosp 90.4 1.3 2.9E-05 44.5 8.9 62 152-219 29-101 (270)
131 PRK03669 mannosyl-3-phosphogly 90.0 0.76 1.6E-05 46.6 6.8 28 155-183 36-64 (271)
132 PRK10976 putative hydrolase; P 89.7 0.88 1.9E-05 45.7 6.9 62 153-220 29-97 (266)
133 PRK15126 thiamin pyrimidine py 89.5 0.82 1.8E-05 46.2 6.6 60 154-219 30-96 (272)
134 PRK15174 Vi polysaccharide exp 89.1 5 0.00011 46.3 13.2 138 346-515 478-631 (656)
135 TIGR01512 ATPase-IB2_Cd heavy 88.9 0.66 1.4E-05 52.1 5.8 82 147-250 363-451 (536)
136 PF00702 Hydrolase: haloacid d 88.9 1.8 4E-05 41.2 8.2 79 147-244 128-215 (215)
137 PLN02423 phosphomannomutase 88.9 0.22 4.7E-06 50.2 1.7 33 173-206 105-137 (245)
138 TIGR01525 ATPase-IB_hvy heavy 88.7 0.87 1.9E-05 51.3 6.6 83 147-250 385-473 (556)
139 PRK06860 lipid A biosynthesis 88.5 6.8 0.00015 40.7 12.6 155 324-514 109-283 (309)
140 PRK05906 lipid A biosynthesis 88.1 7 0.00015 43.2 12.9 102 346-449 139-258 (454)
141 TIGR02208 lipid_A_msbB lipid A 88.1 7.6 0.00016 40.3 12.6 154 324-512 105-278 (305)
142 COG1778 Low specificity phosph 87.9 0.79 1.7E-05 43.4 4.6 102 151-280 43-150 (170)
143 TIGR01691 enolase-ppase 2,3-di 87.7 19 0.00042 35.8 14.7 87 147-246 96-191 (220)
144 PRK05646 lipid A biosynthesis 87.6 10 0.00022 39.4 13.3 134 324-488 106-260 (310)
145 PRK01122 potassium-transportin 86.8 2 4.2E-05 49.8 8.0 83 147-251 446-534 (679)
146 PRK08943 lipid A biosynthesis 86.7 13 0.00028 38.8 13.5 154 324-512 114-287 (314)
147 PRK08706 lipid A biosynthesis 86.7 9.4 0.0002 39.2 12.3 152 325-512 90-262 (289)
148 PRK08734 lipid A biosynthesis 86.3 16 0.00034 38.0 13.9 118 325-449 97-233 (305)
149 PRK14010 potassium-transportin 85.4 2.4 5.2E-05 49.1 7.8 84 146-251 441-530 (673)
150 PF08645 PNK3P: Polynucleotide 84.5 0.5 1.1E-05 44.6 1.6 19 64-82 1-19 (159)
151 TIGR02207 lipid_A_htrB lipid A 84.1 12 0.00027 38.6 11.8 156 323-514 102-277 (303)
152 smart00775 LNS2 LNS2 domain. T 83.8 5.3 0.00012 37.5 8.2 96 151-253 35-152 (157)
153 PRK08733 lipid A biosynthesis 83.4 17 0.00038 37.7 12.6 117 324-449 109-244 (306)
154 COG2217 ZntA Cation transport 82.9 2.6 5.6E-05 49.1 6.7 87 144-251 535-626 (713)
155 PLN02811 hydrolase 82.8 15 0.00033 35.8 11.3 90 147-247 79-180 (220)
156 TIGR01524 ATPase-IIIB_Mg magne 82.6 1.4 2.9E-05 52.6 4.4 100 147-251 516-629 (867)
157 PRK08025 lipid A biosynthesis 82.6 21 0.00045 37.0 12.7 118 323-449 106-243 (305)
158 PLN02887 hydrolase family prot 81.4 8.2 0.00018 44.0 9.8 67 152-219 334-411 (580)
159 COG4030 Uncharacterized protei 79.3 4.8 0.0001 40.4 6.2 117 66-193 3-134 (315)
160 PRK11033 zntA zinc/cadmium/mer 79.0 6 0.00013 46.4 8.0 83 145-250 567-654 (741)
161 PRK01158 phosphoglycolate phos 78.7 1.7 3.7E-05 42.4 3.0 74 165-252 122-201 (230)
162 PF08235 LNS2: LNS2 (Lipin/Ned 78.7 0.94 2E-05 42.9 1.1 51 199-253 92-152 (157)
163 TIGR01261 hisB_Nterm histidino 78.4 12 0.00026 35.3 8.5 93 152-258 38-154 (161)
164 PRK14502 bifunctional mannosyl 77.9 6.2 0.00013 45.6 7.4 30 153-183 443-473 (694)
165 PRK05645 lipid A biosynthesis 77.1 74 0.0016 32.7 14.7 119 324-449 95-232 (295)
166 PTZ00174 phosphomannomutase; P 76.2 2.3 5E-05 42.7 3.2 40 208-249 187-230 (247)
167 smart00775 LNS2 LNS2 domain. T 74.9 1.4 3.1E-05 41.4 1.2 14 65-78 1-14 (157)
168 PRK10517 magnesium-transportin 73.5 7 0.00015 46.9 6.8 102 145-251 549-664 (902)
169 TIGR01675 plant-AP plant acid 73.1 40 0.00086 34.0 11.0 73 152-235 129-209 (229)
170 TIGR01533 lipo_e_P4 5'-nucleot 72.5 19 0.00041 37.1 8.7 29 154-183 129-161 (266)
171 PF08282 Hydrolase_3: haloacid 71.9 4 8.6E-05 39.4 3.6 48 200-253 179-231 (254)
172 PRK03669 mannosyl-3-phosphogly 71.4 3.8 8.3E-05 41.5 3.5 48 209-261 187-242 (271)
173 PRK10513 sugar phosphate phosp 69.9 3 6.5E-05 41.9 2.3 41 208-252 195-240 (270)
174 COG3176 Putative hemolysin [Ge 69.2 8.9 0.00019 39.9 5.5 126 315-451 58-204 (292)
175 TIGR01487 SPP-like sucrose-pho 68.2 17 0.00038 35.1 7.2 76 161-251 110-190 (215)
176 TIGR02463 MPGP_rel mannosyl-3- 68.1 6.4 0.00014 38.3 4.1 36 211-250 184-221 (221)
177 TIGR01689 EcbF-BcbF capsule bi 68.0 3.1 6.8E-05 37.9 1.8 14 64-77 2-15 (126)
178 PRK10976 putative hydrolase; P 67.6 3.6 7.9E-05 41.2 2.3 42 208-253 189-235 (266)
179 TIGR01522 ATPase-IIA2_Ca golgi 67.4 31 0.00066 41.4 10.3 96 146-250 528-643 (884)
180 TIGR01494 ATPase_P-type ATPase 66.2 9.8 0.00021 42.2 5.5 81 145-250 346-432 (499)
181 PF08282 Hydrolase_3: haloacid 65.3 5.2 0.00011 38.6 2.9 23 160-183 33-55 (254)
182 TIGR01116 ATPase-IIA1_Ca sarco 64.4 23 0.00049 42.7 8.5 97 147-251 538-657 (917)
183 TIGR01482 SPP-subfamily Sucros 64.2 26 0.00056 33.8 7.5 76 163-252 112-193 (225)
184 PF06941 NT5C: 5' nucleotidase 62.8 6.7 0.00015 37.6 3.1 43 140-182 66-120 (191)
185 PRK15122 magnesium-transportin 62.8 14 0.0003 44.4 6.3 101 146-251 550-664 (903)
186 PRK01158 phosphoglycolate phos 62.0 34 0.00074 33.2 8.0 20 64-83 4-23 (230)
187 PRK14502 bifunctional mannosyl 61.6 7.6 0.00017 44.9 3.6 86 160-260 574-666 (694)
188 KOG4666 Predicted phosphate ac 61.5 0.94 2E-05 47.3 -3.2 109 414-529 265-376 (412)
189 TIGR01486 HAD-SF-IIB-MPGP mann 61.2 9.1 0.0002 38.3 3.8 39 210-252 180-222 (256)
190 PRK15126 thiamin pyrimidine py 61.0 4.6 9.9E-05 40.8 1.6 40 209-252 188-232 (272)
191 TIGR01484 HAD-SF-IIB HAD-super 60.4 6.4 0.00014 37.7 2.4 37 209-249 163-204 (204)
192 TIGR01664 DNA-3'-Pase DNA 3'-p 60.3 4.8 0.0001 38.1 1.5 21 63-83 13-33 (166)
193 KOG0207 Cation transport ATPas 58.7 18 0.00039 42.9 6.0 87 144-251 721-812 (951)
194 TIGR01647 ATPase-IIIA_H plasma 58.2 15 0.00032 43.3 5.4 100 145-251 441-561 (755)
195 TIGR01684 viral_ppase viral ph 57.1 6.2 0.00014 41.2 1.8 32 152-184 155-187 (301)
196 COG5083 SMP2 Uncharacterized p 57.1 5.6 0.00012 43.4 1.5 17 63-79 375-391 (580)
197 TIGR02461 osmo_MPG_phos mannos 56.0 6.7 0.00015 38.9 1.8 24 222-249 201-224 (225)
198 PF00702 Hydrolase: haloacid d 55.5 7 0.00015 37.1 1.8 18 64-81 2-19 (215)
199 TIGR01681 HAD-SF-IIIC HAD-supe 55.0 6.7 0.00015 35.3 1.5 29 152-181 38-68 (128)
200 TIGR01656 Histidinol-ppas hist 54.5 7.5 0.00016 35.6 1.7 85 151-244 35-138 (147)
201 PRK12702 mannosyl-3-phosphogly 54.3 7.9 0.00017 40.5 2.0 29 154-183 29-58 (302)
202 PRK09484 3-deoxy-D-manno-octul 53.9 6.6 0.00014 37.6 1.3 15 63-77 21-35 (183)
203 TIGR01662 HAD-SF-IIIA HAD-supe 53.5 7.1 0.00015 34.7 1.4 81 152-246 34-126 (132)
204 KOG2914 Predicted haloacid-hal 53.4 51 0.0011 33.1 7.5 48 147-195 93-150 (222)
205 TIGR01670 YrbI-phosphatas 3-de 53.4 6.9 0.00015 36.3 1.3 14 64-77 2-15 (154)
206 PF05822 UMPH-1: Pyrimidine 5' 52.5 89 0.0019 31.9 9.1 111 125-243 73-198 (246)
207 TIGR01663 PNK-3'Pase polynucle 52.1 8.2 0.00018 43.5 1.9 57 385-443 389-450 (526)
208 COG2216 KdpB High-affinity K+ 52.1 31 0.00068 38.7 6.2 83 147-251 448-536 (681)
209 TIGR02471 sucr_syn_bact_C sucr 52.0 25 0.00055 34.6 5.2 39 210-252 160-203 (236)
210 PLN02887 hydrolase family prot 50.2 11 0.00025 42.9 2.6 41 209-253 507-552 (580)
211 PRK10444 UMP phosphatase; Prov 49.6 9 0.0002 38.7 1.6 20 64-83 2-21 (248)
212 PF03031 NIF: NLI interacting 49.3 9.2 0.0002 35.3 1.4 23 159-182 52-74 (159)
213 PF13344 Hydrolase_6: Haloacid 48.9 8.4 0.00018 33.4 1.0 18 66-83 1-18 (101)
214 TIGR01457 HAD-SF-IIA-hyp2 HAD- 48.6 9.4 0.0002 38.4 1.5 19 64-82 2-20 (249)
215 TIGR01517 ATPase-IIB_Ca plasma 47.3 25 0.00053 42.5 5.0 100 146-250 579-694 (941)
216 COG3769 Predicted hydrolase (H 46.6 28 0.00061 35.1 4.3 85 160-260 150-244 (274)
217 PTZ00174 phosphomannomutase; P 46.0 13 0.00028 37.3 2.0 21 63-83 5-25 (247)
218 KOG3109 Haloacid dehalogenase- 45.9 81 0.0018 31.8 7.4 39 144-183 96-138 (244)
219 TIGR01685 MDP-1 magnesium-depe 45.4 45 0.00098 32.0 5.6 31 152-183 54-86 (174)
220 TIGR01458 HAD-SF-IIA-hyp3 HAD- 45.3 12 0.00026 37.9 1.6 19 64-82 2-24 (257)
221 TIGR02471 sucr_syn_bact_C sucr 45.1 8.6 0.00019 37.9 0.6 13 66-78 2-14 (236)
222 TIGR00213 GmhB_yaeD D,D-heptos 44.9 94 0.002 29.2 7.7 89 151-247 34-146 (176)
223 TIGR01662 HAD-SF-IIIA HAD-supe 44.8 1.9E+02 0.0042 25.3 9.3 13 64-76 1-13 (132)
224 TIGR01452 PGP_euk phosphoglyco 44.7 12 0.00025 38.3 1.5 20 64-83 3-22 (279)
225 PHA03398 viral phosphatase sup 44.7 13 0.00028 38.9 1.8 31 152-183 157-188 (303)
226 PLN02645 phosphoglycolate phos 44.3 12 0.00026 38.9 1.6 20 63-82 28-47 (311)
227 TIGR02245 HAD_IIID1 HAD-superf 43.5 41 0.00088 33.0 5.0 22 160-182 62-83 (195)
228 TIGR01523 ATPase-IID_K-Na pota 43.1 50 0.0011 40.5 6.7 99 147-250 647-771 (1053)
229 TIGR00099 Cof-subfamily Cof su 43.0 15 0.00032 36.7 1.9 39 209-251 188-231 (256)
230 TIGR00213 GmhB_yaeD D,D-heptos 42.1 14 0.00031 34.8 1.5 14 64-77 2-15 (176)
231 TIGR01261 hisB_Nterm histidino 41.9 14 0.00031 34.8 1.5 16 64-79 2-17 (161)
232 PRK10187 trehalose-6-phosphate 41.7 23 0.00049 36.1 3.1 29 63-91 14-47 (266)
233 PRK10530 pyridoxal phosphate ( 41.6 15 0.00033 36.6 1.8 38 209-250 199-241 (272)
234 TIGR00685 T6PP trehalose-phosp 40.2 16 0.00034 36.5 1.6 49 189-243 149-202 (244)
235 TIGR02726 phenyl_P_delta pheny 39.9 15 0.00031 35.1 1.2 14 64-77 8-21 (169)
236 TIGR01668 YqeG_hyp_ppase HAD s 39.2 1.4E+02 0.0031 27.9 8.0 67 152-236 52-123 (170)
237 TIGR01656 Histidinol-ppas hist 39.1 1.4E+02 0.0029 27.2 7.6 18 64-81 1-18 (147)
238 PF03767 Acid_phosphat_B: HAD 38.9 21 0.00045 35.7 2.2 20 62-84 71-90 (229)
239 PF11019 DUF2608: Protein of u 38.6 1.4E+02 0.003 30.3 8.2 92 149-245 87-200 (252)
240 TIGR02244 HAD-IG-Ncltidse HAD 38.6 58 0.0013 34.8 5.6 31 151-181 192-223 (343)
241 KOG2116 Protein involved in pl 37.7 16 0.00035 41.8 1.3 17 63-79 530-546 (738)
242 smart00577 CPDc catalytic doma 37.1 55 0.0012 30.0 4.6 24 158-182 59-83 (148)
243 PRK08942 D,D-heptose 1,7-bisph 37.0 22 0.00047 33.6 2.0 35 209-247 107-143 (181)
244 TIGR01485 SPP_plant-cyano sucr 37.0 58 0.0013 32.4 5.1 39 210-252 168-212 (249)
245 PLN02382 probable sucrose-phos 37.0 42 0.00091 36.6 4.4 27 222-252 196-223 (413)
246 TIGR01681 HAD-SF-IIIC HAD-supe 36.8 94 0.002 27.8 6.0 14 64-77 1-14 (128)
247 PF04144 SCAMP: SCAMP family; 36.7 61 0.0013 31.2 5.0 23 254-276 2-24 (177)
248 KOG1618 Predicted phosphatase 36.6 1.2E+02 0.0026 32.3 7.3 106 63-186 35-144 (389)
249 COG1877 OtsB Trehalose-6-phosp 36.5 25 0.00055 36.2 2.4 41 60-104 15-55 (266)
250 COG1778 Low specificity phosph 36.5 20 0.00044 34.1 1.6 14 64-77 9-22 (170)
251 TIGR01456 CECR5 HAD-superfamil 35.8 22 0.00047 37.3 1.9 19 65-83 2-20 (321)
252 TIGR01460 HAD-SF-IIA Haloacid 35.6 16 0.00035 36.3 0.9 17 66-82 1-17 (236)
253 PRK00192 mannosyl-3-phosphogly 34.2 38 0.00083 34.2 3.3 27 221-251 208-234 (273)
254 TIGR01684 viral_ppase viral ph 34.2 82 0.0018 33.1 5.7 16 63-78 126-141 (301)
255 PF12689 Acid_PPase: Acid Phos 34.0 21 0.00045 34.2 1.3 31 151-183 53-86 (169)
256 PF09949 DUF2183: Uncharacteri 34.0 72 0.0016 27.9 4.5 69 162-236 3-79 (100)
257 TIGR01106 ATPase-IIC_X-K sodiu 33.9 1.2E+02 0.0026 37.0 8.0 99 147-250 569-709 (997)
258 TIGR01485 SPP_plant-cyano sucr 33.5 37 0.0008 33.8 3.1 13 64-76 2-14 (249)
259 KOG3088 Secretory carrier memb 33.3 95 0.002 32.4 5.8 25 252-276 97-121 (313)
260 PRK08942 D,D-heptose 1,7-bisph 32.8 2.7E+02 0.006 26.0 8.8 15 63-77 3-17 (181)
261 PF03982 DAGAT: Diacylglycerol 32.6 71 0.0015 33.4 5.0 125 380-514 111-275 (297)
262 COG0647 NagD Predicted sugar p 31.1 26 0.00056 36.1 1.5 21 63-83 8-28 (269)
263 smart00577 CPDc catalytic doma 30.9 31 0.00067 31.7 1.8 16 63-78 2-17 (148)
264 TIGR01484 HAD-SF-IIB HAD-super 30.7 32 0.0007 32.8 2.0 14 65-78 1-14 (204)
265 PLN03017 trehalose-phosphatase 30.6 30 0.00065 37.3 1.9 16 60-75 108-123 (366)
266 PF15202 Adipogenin: Adipogeni 30.3 87 0.0019 25.6 4.0 22 283-304 14-35 (81)
267 PLN02580 trehalose-phosphatase 27.9 34 0.00074 37.1 1.8 56 190-251 283-352 (384)
268 COG0474 MgtA Cation transport 27.4 52 0.0011 39.7 3.3 98 147-249 548-663 (917)
269 PF05116 S6PP: Sucrose-6F-phos 27.0 66 0.0014 32.3 3.6 70 171-253 135-210 (247)
270 TIGR02251 HIF-SF_euk Dullard-l 27.0 38 0.00082 31.8 1.7 17 63-79 1-17 (162)
271 PHA02530 pseT polynucleotide k 26.7 89 0.0019 31.8 4.6 92 147-246 188-291 (300)
272 PLN02151 trehalose-phosphatase 26.6 38 0.00083 36.3 1.9 15 61-75 96-110 (354)
273 KOG3189 Phosphomannomutase [Li 26.2 39 0.00085 33.5 1.7 21 63-83 11-32 (252)
274 TIGR01664 DNA-3'-Pase DNA 3'-p 25.1 3.6E+02 0.0078 25.3 8.0 33 150-183 49-94 (166)
275 TIGR02463 MPGP_rel mannosyl-3- 24.0 1.4E+02 0.003 28.8 5.2 30 153-183 26-56 (221)
276 TIGR01685 MDP-1 magnesium-depe 23.6 43 0.00093 32.2 1.4 14 64-77 3-16 (174)
277 TIGR01680 Veg_Stor_Prot vegeta 23.6 54 0.0012 34.0 2.2 20 62-84 100-119 (275)
278 PLN02423 phosphomannomutase 22.9 40 0.00086 33.9 1.1 42 207-250 187-231 (245)
279 PF00795 CN_hydrolase: Carbon- 22.4 86 0.0019 29.2 3.2 22 403-424 25-47 (186)
280 TIGR02250 FCP1_euk FCP1-like p 22.1 58 0.0013 30.5 2.0 18 60-77 3-20 (156)
281 TIGR01668 YqeG_hyp_ppase HAD s 21.9 51 0.0011 31.1 1.5 23 61-83 23-47 (170)
282 TIGR03703 plsB glycerol-3-phos 21.5 3.1E+02 0.0067 32.8 8.1 143 344-514 26-192 (799)
283 TIGR01459 HAD-SF-IIA-hyp4 HAD- 21.1 55 0.0012 32.5 1.7 20 64-83 9-28 (242)
284 PHA03398 viral phosphatase sup 20.9 1.9E+02 0.004 30.5 5.5 17 63-79 128-144 (303)
285 TIGR02461 osmo_MPG_phos mannos 20.9 1.7E+02 0.0037 28.9 5.1 31 152-183 24-55 (225)
286 TIGR01459 HAD-SF-IIA-hyp4 HAD- 20.8 1.2E+02 0.0026 30.0 4.1 32 151-183 32-66 (242)
287 KOG3128 Uncharacterized conser 20.4 1.6E+02 0.0034 30.4 4.7 85 151-238 146-243 (298)
288 PF09419 PGP_phosphatase: Mito 20.2 61 0.0013 31.1 1.7 16 63-78 41-56 (168)
289 PRK14501 putative bifunctional 20.1 55 0.0012 38.3 1.7 32 209-244 657-691 (726)
No 1
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=100.00 E-value=1.8e-126 Score=1014.04 Aligned_cols=472 Identities=43% Similarity=0.718 Sum_probs=450.6
Q ss_pred ccCCcCeEEEEEcCCccccCCCchHHHHHHHHhhcchHHHHHHHHHHHHHHhc---c-cchhHHHHHHHHhcCcccchhH
Q 042170 58 SDQVSERTLIFNVEGFLLKSSSLFPYFMLVAFEAGGLIRAFLLFILYPLICLA---G-EEMGLKIMVMVSFFWVKKDNFR 133 (543)
Q Consensus 58 ~~~~~~~~a~FD~DGTLl~~~s~fp~f~~~a~~~~~~~r~~~ll~~~p~~~~l---~-~~~~~k~~~~~~f~G~~~~~~~ 133 (543)
.+++++++++||||||||++.|+|||||+||+|+||++|++++|++||+++++ + ++.++|+|++++|+|+++++++
T Consensus 3 ~~~~~~~~~~fD~DGTLlrs~ssFpyFmlva~eagG~~R~~~LL~l~P~l~ll~~~~~~~~~lK~mi~v~f~Gl~~~die 82 (498)
T PLN02499 3 QSGTTSYSVVSELEGTLLKDADPFSYFMLVAFEASGLIRFALLLFLWPIIRLLDMLGMGDAALKLMIFVATAGVHESEIE 82 (498)
T ss_pred cCCcccceEEEecccceecCCCccHHHHHHHHHhccHHHHHHHHHHhHHHHHHHhcCCchHHHHHHHHHHhCCCCHHHHH
Confidence 35677889999999999998999999999999999999999999999999986 4 7889999999999999999999
Q ss_pred -HHHhhchhhHHHhcCHHHHHHHHhCCcEEEEeCCcHHHHHHHHHhhCCCcEEEeceEEEeC-eEEeeeeccCCCcHHHH
Q 042170 134 -VGRAVLPKFFLENVGLEIFEVLKKGGKTVAVSNMPQVMIDSFLRDYLDIDLVVGRELKVFC-GYFVGLMEDKKKNILVL 211 (543)
Q Consensus 134 -va~avlpk~~~e~l~~ea~~~~~~~g~~v~VSAsp~~~vepfak~~lG~d~VlgTelev~~-G~~TG~~~g~~~g~~Kv 211 (543)
+||+|+||||++++++|+|+.++++|++|+|||||++|||||+|||||+|.|||||||+++ |+|||.++|.||++.|+
T Consensus 83 ~vaRavlpkf~~~dv~~e~~~~~~~~g~~vVVTAsPrvmVEpFake~LG~D~VvGTEL~v~~~G~~TG~~~G~n~~ek~~ 162 (498)
T PLN02499 83 SVARAVLPKFYMDDVDMEAWKVFSSCDKRVVVTRMPRVMVERFAKEHLRADEVIGSELVVNRFGFATGFIRGTDVDQSVA 162 (498)
T ss_pred HHHHHHhhHHHHhhCCHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHhcCCceEEeeeEEEeeccEEEEEEecCccHHHHH
Confidence 9999999999999999999999998999999999999999999999999999999999985 99999999999976679
Q ss_pred HHHHHHhcCC-ceEEEeCCCCCcchhcccccccCceeeccCCcccCCcccccCCCCCCeeeeCCCccccchHHHHHHHHH
Q 042170 212 QEIIKQENSG-DVIGISSLNSSLDHYKLFLQQCNEVYLVRSTDKRSWQHLSRDKYPKPLIFHDGRLAFRPALSDCLAMFM 290 (543)
Q Consensus 212 ~~l~~~~~~~-~~~aygD~~S~~D~~~m~L~~~~~~y~v~p~~~~~w~~l~~~~~~~plifhdgr~~~~p~~~~~l~~~~ 290 (543)
+|++++++++ .++|+|| +.+|++ + +++|||.|+++.++++.|.++||++||+||||||||||+||||.++|++++
T Consensus 163 ~rl~~~~g~~~~~vg~~~--~~~~~~-f-~~~ck~~~~~~~~~~~~~~~~~~~~~~~p~ifhdgrl~~~ptp~~~l~~~~ 238 (498)
T PLN02499 163 NRVANLFVDERPQLGLGR--ISASSS-F-LSLCKEQIHPPFPANYNGDNQQQLVRPLPVIFHDGRLVKRPTPATALLILL 238 (498)
T ss_pred HHHHHHhCccCceecccC--Ccccch-h-hhhCceEEecCcccccccccCccccCCCCeEEeCCcccCCCCHHHHHHHHH
Confidence 9999999875 8999999 779999 8 899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcchhHhHHHHHHHcCeEEEEeccCCCCccccCcccccCCCceEEEecCCCCCcHHHHHHhhcC
Q 042170 291 WFPFGLVVAIIRSFVALTLPFEISTPTLIFSGLRFTVITKPKTSRSFQNSRDCQKTERTLYVCNHRTLLDPLYLSFALKK 370 (543)
Q Consensus 291 ~lp~gl~l~~~r~~~~~~lp~~~~~~ll~~~Gvrv~v~G~~~~~~~~~~~~~~~~~~~~l~VaNH~S~LD~~vl~a~l~~ 370 (543)
|+|+|++|+++|++++..+|+++...++.++|++++|+|.+|.|.. ++++|+|+||||+|++||++|+.++++
T Consensus 239 w~P~g~~l~~~R~~~~~~lp~~~~~~~~~~~G~~v~V~G~e~~P~~-------~~~~gvL~v~NH~S~lDp~~l~~al~R 311 (498)
T PLN02499 239 WIPLGIILAVIRIFVGIMLPMWAIPYVSRIFGGKVIVKGKPPPPAS-------GGNSGVLFVCTHRTLMDPVVLSTVLGR 311 (498)
T ss_pred HHHHHHHHHHHHHHHHhHhHHHHHHHHHHhcCceEEEEcCCCCCCc-------CCCCCEEEEeCCCCcccHHHHHHHcCC
Confidence 9999999999999999999999999999999999999999997720 124799999999999999999999999
Q ss_pred ceeEEeeehhhhhhhhhcCceeEeecCchHHHHHHHHHHhCCCeEEecCccccCCCcccccchhhhhcCCceEEEEEEec
Q 042170 371 NLTAVTYSLSRMSEILAPIKTVRMTRNRDQDAKLVKSLLNQGDLVICPEGTTCREPYLLRFSPLFAEMSDNIIPVASNSH 450 (543)
Q Consensus 371 ~~~~va~sl~~v~~~l~~i~tv~v~R~r~~~~~~~~~~L~~G~l~iFPEGTtt~g~~Ll~F~~~fa~l~~pV~PVaI~~~ 450 (543)
++++++++++.++++++++++++++|+|..|.++|++.|++|+|+||||||||+++.|++||+++++++++||||+|.++
T Consensus 312 ~v~~vay~~~~ls~ll~~i~avrv~R~r~~d~~air~lL~~G~lvIFPEGTrsreg~LlrFk~l~aela~pVVPVAI~~~ 391 (498)
T PLN02499 312 SIPAVTYSISRLSEILSPIPTVRLTRIRDVDAEKIKRELARGDLVVCPEGTTCREPFLLRFSALFAELTDRIVPVAMNYR 391 (498)
T ss_pred ceeehHhhHHHHHHHhcccCeeeecCCchhHHHHHHHHhhCCCEEEcCCCCCCCCCcccccchhhhhhcCceEeEEEEec
Confidence 99999999999999999999999999998899999999999999999999999999999999999999999999999999
Q ss_pred cccccccccCCcccccchhcccCCCCeEEEEEcccccCCcccCCCCCCHHHHHHHHHHHHHHHhCCCccCCChhhHHHhh
Q 042170 451 VTMFYGTTAGGLKCLDPFFFLMNPSPGYTMQLLEGVSGLSMCQDGNESRFDVANYVQSELGKALGFECTKLTRRDKYQIL 530 (543)
Q Consensus 451 ~~~~~gt~~~~~~~~d~~~~l~~P~~~v~V~fL~pi~~~~~~~~~~~~~~elA~~vq~~Ia~~Lg~~~T~~T~~Dk~~~l 530 (543)
+++|||||++||||+|++||+|||+|.|+|+||++++.+.+|. ++++..|+||+||+.||++||||||++||||||++|
T Consensus 392 ~~~f~gtta~g~k~~Dp~~f~mnP~p~y~v~fL~~~~~~~t~~-~g~s~~evan~vQ~~la~~LgfecT~lTrkdKy~~l 470 (498)
T PLN02499 392 VGFFHATTARGWKGLDPIFFFMNPRPVYEVTFLNQLPVEATCS-SGKSPHDVANYVQRILAATLGFECTNFTRKDKYRVL 470 (498)
T ss_pred cceEEEEcCCCCchhhhhhheecCCceEEEEEcCCCChhhccC-CCCChHHHHHHHHHHHHHHhCCccccccHHHHHHHh
Confidence 9999999999999999999999999999999999999998886 589999999999999999999999999999999999
Q ss_pred hcCCccccCCC
Q 042170 531 AGNDGIACTSS 541 (543)
Q Consensus 531 agn~g~v~~~~ 541 (543)
|||||+|+.++
T Consensus 471 agndg~v~~~~ 481 (498)
T PLN02499 471 AGNDGTVSYLS 481 (498)
T ss_pred cCCCccccCcc
Confidence 99999998765
No 2
>PLN02588 glycerol-3-phosphate acyltransferase
Probab=100.00 E-value=3.2e-125 Score=1000.99 Aligned_cols=508 Identities=57% Similarity=0.978 Sum_probs=452.3
Q ss_pred chhhhhhhHHHHHHHHHHhhhcCcccccccCCCCccCCCCCCCcCCCccccccccCCcCeEEEEEcCCccccCCCchHHH
Q 042170 5 IKFSFFKTLFFFFIRTVFGQFRNPKALHRSVSNLHATHSGSSKYQKYTSLVHISDQVSERTLIFNVEGFLLKSSSLFPYF 84 (543)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~FD~DGTLl~~~s~fp~f 84 (543)
++.+..|++. .+++++.+++++...+||......+. .+ .| ++++++++++|+||||+++.|+||||
T Consensus 6 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~--~~--~~~~~~t~v~d~~g~Ll~s~s~Fpyf 71 (525)
T PLN02588 6 ISTLQALVFF-LYRFFILRRWCHRNPKQKYQKCPSHG---------LH--QY--QDLSNHTLIFNVEGALLKSNSLFPYF 71 (525)
T ss_pred HHHHHHHHHH-HHHHHHhccccccCCCCCcccCCccc---------cc--cc--cccccceEEEecccceeccCCCCcce
Confidence 4444444443 38889888887764444422211110 00 01 56778899999999999999999999
Q ss_pred HHHHHhhcchHHHHHHHHHHHHHHhcccchhHHHHHHHHhcCcccchhHHHHhhchhhHHHhcCHHHHHHHHhCCcEEEE
Q 042170 85 MLVAFEAGGLIRAFLLFILYPLICLAGEEMGLKIMVMVSFFWVKKDNFRVGRAVLPKFFLENVGLEIFEVLKKGGKTVAV 164 (543)
Q Consensus 85 ~~~a~~~~~~~r~~~ll~~~p~~~~l~~~~~~k~~~~~~f~G~~~~~~~va~avlpk~~~e~l~~ea~~~~~~~g~~v~V 164 (543)
|+||+|+||++|++++|+.||++++++++.++|.|+|++|+|++++++|+||+||||||+||+++|+|++++++|++|+|
T Consensus 72 mlvA~Eag~~lR~l~Ll~~~P~~~~~~~~~~~~~m~~v~f~Gl~~~~~~v~ravLPkf~~~dv~~e~~~v~~~~~~~~vv 151 (525)
T PLN02588 72 MVVAFEAGGVIRSLFLFVLYPFISLMSYEMGLKTMVMLSFFGVKKESFRAGKAVLPKYFLEDVGLEMFQVLKRGGKRVGV 151 (525)
T ss_pred eeeeeccccHHHHHHHHHHhHHHHHhccchhhHHhHHHhhcCCcHHHhhhHHhhccHHHHhhcCHHHHHHHhhcCcEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCcHHHHHHHHHhhCCCcEEEeceEEEeCeEEeeeeccCCCcHHHHHHHHH-HhcCC-c----eEEEeCCCC-Ccchhc
Q 042170 165 SNMPQVMIDSFLRDYLDIDLVVGRELKVFCGYFVGLMEDKKKNILVLQEIIK-QENSG-D----VIGISSLNS-SLDHYK 237 (543)
Q Consensus 165 SAsp~~~vepfak~~lG~d~VlgTelev~~G~~TG~~~g~~~g~~Kv~~l~~-~~~~~-~----~~aygD~~S-~~D~~~ 237 (543)
|++||+|||||+|||||+|.|+||||++..|+|||.+++.+ |.++..+ +++++ + ++|+||+++ .+|+.
T Consensus 152 ~~~PrvMve~Flkeyl~~d~V~g~El~~~~g~~tG~~~~~~----~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~- 226 (525)
T PLN02588 152 SDLPQVMIDVFLRDYLEIEVVVGRDMKMVGGYYLGIMEDKK----KHELAFDKVVQEERLNSGRLIGITSFNSPSHRSL- 226 (525)
T ss_pred ecCCHHHHHHHHHHhcCcceEeeeeEEEeeeEEEEEEcccc----hHHHHHHHHhcccCcccccceeecccCcccccch-
Confidence 99999999999999999999999999999999999999654 4444333 45544 5 899999543 45665
Q ss_pred ccccccCceeeccCCcccCCcccccCCCCCCeeeeCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHH
Q 042170 238 LFLQQCNEVYLVRSTDKRSWQHLSRDKYPKPLIFHDGRLAFRPALSDCLAMFMWFPFGLVVAIIRSFVALTLPFEISTPT 317 (543)
Q Consensus 238 m~L~~~~~~y~v~p~~~~~w~~l~~~~~~~plifhdgr~~~~p~~~~~l~~~~~lp~gl~l~~~r~~~~~~lp~~~~~~l 317 (543)
+ +++|||.|+|+++++|+|+++||++|||||||||||||+||||.++|+|++|+|+|++|+++|+.+++.||++++..+
T Consensus 227 f-~~~CkE~y~v~~~~~~~~~~~p~~~~~~pliFHDGRL~~rPtp~~~l~~~~wlP~g~~La~~R~~~~~~lP~~~~~~~ 305 (525)
T PLN02588 227 F-SQFCQEIYFVRNSDKKSWQTLPRDQYPKPLIFHDGRLAIKPTPLNTLVLFMWAPFAAALAAARLVFGLNLPYSLANPF 305 (525)
T ss_pred h-HHhCcceEEeChhhccccccCCcccCCCceeEeCCcccCCCChHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHH
Confidence 6 789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCeEEEEeccCCCCccccCcccccCCCceEEEecCCCCCcHHHHHHhhc-CceeEEeeehhhhhhhhhcCceeEeec
Q 042170 318 LIFSGLRFTVITKPKTSRSFQNSRDCQKTERTLYVCNHRTLLDPLYLSFALK-KNLTAVTYSLSRMSEILAPIKTVRMTR 396 (543)
Q Consensus 318 l~~~Gvrv~v~G~~~~~~~~~~~~~~~~~~~~l~VaNH~S~LD~~vl~a~l~-~~~~~va~sl~~v~~~l~~i~tv~v~R 396 (543)
++++|++++++|.++.+ ...++|+|+||||+||+|++++..+++ +++++++++++.++++++++++++|+|
T Consensus 306 ~~~~Gvrl~v~g~~p~~--------~~~~~gvI~V~NH~S~LDPi~L~~Al~rr~I~~mtFsip~lg~lL~~i~ti~VdR 377 (525)
T PLN02588 306 LAFSGIHLTLTVNDLIS--------SDRKKGCLFVCNHRTLLDPLYISYALRKKNIKAVTYSLSRLSELLAPIKTVRLTR 377 (525)
T ss_pred HHHcCcEEEEEeCCCCC--------CCCCCCEEEEECCcchhhHHHHHHHcccCcceEEEEEhHHHHHHHHhcCceeecC
Confidence 99999999999775432 123579999999999999999999996 569999998888999999999999999
Q ss_pred CchHHHHHHHHHHhCCCeEEecCccccCCCcccccchhhhhcCCceEEEEEEeccccccccccCCcccccchhcccCCCC
Q 042170 397 NRDQDAKLVKSLLNQGDLVICPEGTTCREPYLLRFSPLFAEMSDNIIPVASNSHVTMFYGTTAGGLKCLDPFFFLMNPSP 476 (543)
Q Consensus 397 ~r~~~~~~~~~~L~~G~l~iFPEGTtt~g~~Ll~F~~~fa~l~~pV~PVaI~~~~~~~~gt~~~~~~~~d~~~~l~~P~~ 476 (543)
++..|.++|++.|++|+++||||||||+++.|++||+++++++++||||+|+++.++|+|+++.||+|+|++|++|||++
T Consensus 378 dr~~D~~aI~~LLk~GdlVIFPEGTRsr~g~LlrFk~l~A~la~~IVPVAI~~~~~~f~gtt~~g~k~~D~~~fl~nP~p 457 (525)
T PLN02588 378 DRVKDGQAMEKLLSQGDLVVCPEGTTCREPYLLRFSPLFSEVCDVIVPVAIDSHVTFFYGTTASGLKAFDPIFFLLNPFP 457 (525)
T ss_pred CCcchHHHHHHHHhCCCEEEccCccccCCCcccChhhhHHHhcCceeeEEEEEeccccceeecCCCcccceeEEEecCCc
Confidence 98788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEcccccC--CcccCC--CCCCHHHHHHHHHHHHHHHhCCCccCCChhhHHHhhhcCCccccCC
Q 042170 477 GYTMQLLEGVSG--LSMCQD--GNESRFDVANYVQSELGKALGFECTKLTRRDKYQILAGNDGIACTS 540 (543)
Q Consensus 477 ~v~V~fL~pi~~--~~~~~~--~~~~~~elA~~vq~~Ia~~Lg~~~T~~T~~Dk~~~lagn~g~v~~~ 540 (543)
.|+|+||++++. |.+|++ ++++..|+||+||++||++||++||++||||||++||||||+|++|
T Consensus 458 ~y~V~fL~~v~~~~e~~~~~p~~g~s~~evAn~VQ~~iA~~LG~e~T~~Tr~dkY~~LaGndG~v~~~ 525 (525)
T PLN02588 458 SYTVQLLDPVSGSSSSTCQDPDNGKLKFEVANHVQHEIGNALGFECTNLTRRDKYLILAGNNGVVKKK 525 (525)
T ss_pred eEEEEEcCcCCchhhhcccCcccCCChHHHHHHHHHHHHHhhCceecccchhhhhheecCCCcccCCC
Confidence 999999999997 556753 2799999999999999999999999999999999999999999754
No 3
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=100.00 E-value=1.6e-119 Score=978.74 Aligned_cols=478 Identities=40% Similarity=0.746 Sum_probs=449.7
Q ss_pred CCcccc-ccccCCcCeEEEEEcCCccccCCCchHHHHHHHHhhcchHHHHHHHHHHHHHHhc----ccchhHHHHHHHHh
Q 042170 50 KYTSLV-HISDQVSERTLIFNVEGFLLKSSSLFPYFMLVAFEAGGLIRAFLLFILYPLICLA----GEEMGLKIMVMVSF 124 (543)
Q Consensus 50 ~~~~~~-~~~~~~~~~~a~FD~DGTLl~~~s~fp~f~~~a~~~~~~~r~~~ll~~~p~~~~l----~~~~~~k~~~~~~f 124 (543)
+||+++ |+.+++++++++||||||||+++|+|||||++|+|+++++|++++++.+|+++++ .++...+.+++.+|
T Consensus 8 ~~~~~~~~~~~~~~~~~~~FDfDGTLt~~~s~f~~Fll~A~~~~~~~r~lllll~~P~~~l~~~~~~~~~~~~~l~~~~f 87 (497)
T PLN02177 8 RFEPISKCSSEGRSNQTVAADLDGTLLISRSAFPYYLLVALEAGSLLRALILLLSVPFVYFTYLFISESLAIKTFVFIAF 87 (497)
T ss_pred CCCccccCCcccccccEEEEecCCcccCCCCccHHHHHHHcccchHHHHHHHHHHhHHHHHHHhcCCchhHHHHHHHHHH
Confidence 477777 8888999999999999999999999999999999999999999999999988864 46777889999999
Q ss_pred cCcccchhH-HHHhhchhhHHHhcCHHHHHHHHhCCcEEEEeCCcHHHHHHHHHhhCCCcEEEeceEEE-eCeEEeeeec
Q 042170 125 FWVKKDNFR-VGRAVLPKFFLENVGLEIFEVLKKGGKTVAVSNMPQVMIDSFLRDYLDIDLVVGRELKV-FCGYFVGLME 202 (543)
Q Consensus 125 ~G~~~~~~~-va~avlpk~~~e~l~~ea~~~~~~~g~~v~VSAsp~~~vepfak~~lG~d~VlgTelev-~~G~~TG~~~ 202 (543)
.|+++++++ ++++++|+|+.+++++++++.+++.|++|+|||||++|||||+++|+|+|+|||||+|+ .+|+|||++.
T Consensus 88 ~G~~~~el~~~~r~~l~~f~~~~l~~~a~~~~~~~g~~vvVSASp~~~Vepfa~~~LGid~VIgTeLev~~~G~~TG~i~ 167 (497)
T PLN02177 88 AGLKIRDIELVSRSVLPKFYAEDVHPETWRVFNSFGKRYIITASPRIMVEPFVKTFLGADKVLGTELEVSKSGRATGFMK 167 (497)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHhcCHHHHHHHHhCCCEEEEECCcHHHHHHHHHHcCCCCEEEecccEECcCCEEeeeec
Confidence 999999999 99999999999999999999999989889999999999999999889999999999999 5999999999
Q ss_pred cCC-C-cHHHHHHHHHHhcCC-ceEEEeCCCCCcchhcccccccCceeeccCCcccCCcccccCCCCCCeeeeCCCcccc
Q 042170 203 DKK-K-NILVLQEIIKQENSG-DVIGISSLNSSLDHYKLFLQQCNEVYLVRSTDKRSWQHLSRDKYPKPLIFHDGRLAFR 279 (543)
Q Consensus 203 g~~-~-g~~Kv~~l~~~~~~~-~~~aygD~~S~~D~~~m~L~~~~~~y~v~p~~~~~w~~l~~~~~~~plifhdgr~~~~ 279 (543)
|.| | |++|++|++++++++ .++|||| |.+|+| | |++|+|+|+||+ ++|+++||++|||||||||||||+|
T Consensus 168 g~~~c~Ge~Kv~rl~~~~g~~~~~~aYgD--S~sD~p-l-L~~a~e~y~V~~---~~~~~~~~~~~~~~~~fhdgrl~~~ 240 (497)
T PLN02177 168 KPGVLVGDHKRDAVLKEFGDALPDLGLGD--RETDHD-F-MSICKEGYMVPR---TKCEPLPRNKLLSPVIFHEGRLVQR 240 (497)
T ss_pred CCCCCccHHHHHHHHHHhCCCCceEEEEC--CccHHH-H-HHhCCccEEeCC---CCCCcCCcccCCCceeeeCCcccCC
Confidence 996 6 899999999888754 6699999 999999 9 899999999998 3499999999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHHHHcCeEEEEeccCCCCccccCcccccCCCceEEEecCCCCC
Q 042170 280 PALSDCLAMFMWFPFGLVVAIIRSFVALTLPFEISTPTLIFSGLRFTVITKPKTSRSFQNSRDCQKTERTLYVCNHRTLL 359 (543)
Q Consensus 280 p~~~~~l~~~~~lp~gl~l~~~r~~~~~~lp~~~~~~ll~~~Gvrv~v~G~~~~~~~~~~~~~~~~~~~~l~VaNH~S~L 359 (543)
|||.++|+|++|+|+|++|+++|+++++.+|++|++.+++++|++++|+|.++.|. .+.++|+|+||||+|++
T Consensus 241 p~~~~~l~~~~~~p~g~~l~~~r~~~~~~lp~~~~~~~~~~~Gv~v~v~G~e~~p~-------~~~~~~~l~v~NHqS~l 313 (497)
T PLN02177 241 PTPLVALLTFLWMPIGFILSLLRVYLNIPLPERIARYNYKLLGIRLIVKGNPPPPP-------KKGQPGVLFVCNHRTVL 313 (497)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHcCcEEEEEcCCCCCc-------ccCCCCeEEEECCCCcc
Confidence 99999999999999999999999999999999999999999999999999988761 01247999999999999
Q ss_pred cHHHHHHhhcCceeEEeeehhhhhhhhhcCceeEeecCchHHHHHHHHHHhCCCeEEecCccccCCCcccccchhhhhcC
Q 042170 360 DPLYLSFALKKNLTAVTYSLSRMSEILAPIKTVRMTRNRDQDAKLVKSLLNQGDLVICPEGTTCREPYLLRFSPLFAEMS 439 (543)
Q Consensus 360 D~~vl~a~l~~~~~~va~sl~~v~~~l~~i~tv~v~R~r~~~~~~~~~~L~~G~l~iFPEGTtt~g~~Ll~F~~~fa~l~ 439 (543)
|++++.+++++++.+++++++++++++.++++++++|+|.++.+++++.|++|+++||||||+|+++.+++||++|++++
T Consensus 314 D~~~l~~al~~~~~~v~~~~~~l~~~l~~i~~~~ldR~r~~~~~~~~~lL~~g~lvIFPEGTrs~~~~l~~Fk~~fa~l~ 393 (497)
T PLN02177 314 DPVVTAVALGRKISCVTYSISKFSELISPIKAVALSREREKDAANIKRLLEEGDLVICPEGTTCREPFLLRFSALFAELT 393 (497)
T ss_pred hHHHHHHHcCCCeEEEeehHHHHHHHHHhcCEEEEeCCChHHHHHHHHHHhcCCEEECcCcCCCCCCCcchHHHHHHHHC
Confidence 99999999999999999988888999999999999999878888899999999999999999999999999999999999
Q ss_pred CceEEEEEEeccccccccccCCcccccchhcccCCCCeEEEEEcccccCCcccCCCCCCHHHHHHHHHHHHHHHhCCCcc
Q 042170 440 DNIIPVASNSHVTMFYGTTAGGLKCLDPFFFLMNPSPGYTMQLLEGVSGLSMCQDGNESRFDVANYVQSELGKALGFECT 519 (543)
Q Consensus 440 ~pV~PVaI~~~~~~~~gt~~~~~~~~d~~~~l~~P~~~v~V~fL~pi~~~~~~~~~~~~~~elA~~vq~~Ia~~Lg~~~T 519 (543)
.||+||||.++..+|++++.++|||+|++||+|||+|.|+|+||+||+++.+|. .+++..|+||+||+.|+++||+|||
T Consensus 394 ~pIVPVAI~~~~~~f~~~t~~~~~~~d~~~~~~~p~~~y~V~fL~~l~~~~~~~-~~~~~~evAn~Vq~~i~~~lg~~~t 472 (497)
T PLN02177 394 DRIVPVAINTKQSMFHGTTVRGYKLLDPYFVFMNPRPTYEITFLNQLPKELTCK-GGKSPIEVANYIQRVLAGTLGFECT 472 (497)
T ss_pred CcEEEEEEEcccccccccccccceecchhhhhcCCCceEEEEECCCCChhhccc-CCCCHHHHHHHHHHHHHHhhCceec
Confidence 999999999999999999999999999999999999999999999999988775 5899999999999999999999999
Q ss_pred CCChhhHHHhhhcCCccccCCCC
Q 042170 520 KLTRRDKYQILAGNDGIACTSSK 542 (543)
Q Consensus 520 ~~T~~Dk~~~lagn~g~v~~~~~ 542 (543)
++||||||++||||||+|..++.
T Consensus 473 ~~tr~dk~~~l~gn~g~v~~~~~ 495 (497)
T PLN02177 473 NLTRKDKYAILAGTDGRVPSKKE 495 (497)
T ss_pred cccHHHHHHHhcCCCccccCCCC
Confidence 99999999999999999987753
No 4
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=99.97 E-value=8.4e-31 Score=256.97 Aligned_cols=183 Identities=15% Similarity=0.188 Sum_probs=141.9
Q ss_pred cCeEEEEEcCCccccCCCchHHHHHHHHhhcchHHHHHHHHHHHHHHhcc-------cchhHHHHHHHHhcCcccchhH-
Q 042170 62 SERTLIFNVEGFLLKSSSLFPYFMLVAFEAGGLIRAFLLFILYPLICLAG-------EEMGLKIMVMVSFFWVKKDNFR- 133 (543)
Q Consensus 62 ~~~~a~FD~DGTLl~~~s~fp~f~~~a~~~~~~~r~~~ll~~~p~~~~l~-------~~~~~k~~~~~~f~G~~~~~~~- 133 (543)
..++|+||||||||++||+.+| +.++.+ .+...++++++.-.++.++ ++.+.+.+++.+|.|+++++++
T Consensus 4 ~~~la~FDfDgTLt~~ds~~~f-l~~~~~--~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~l~~ 80 (210)
T TIGR01545 4 AKRIIFFDLDGTLHQQDMFGSF-LRFLLR--HLPLNALLVIPLLPIIAIALLIGGRAARWPMSLLLWACTFGHREAHLQD 80 (210)
T ss_pred cCcEEEEcCCCCCccCccHHHH-HHHHHH--HhHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHcCCCHHHHHH
Confidence 5789999999999999887776 556653 3332222222111122221 4556676777778899999999
Q ss_pred HHHhhchhhHHH-hcCHHHHHHHH----hCC-cEEEEeCCcHHHHHHHHHhh--CCCcEEEeceEEEeCeEEeeeeccCC
Q 042170 134 VGRAVLPKFFLE-NVGLEIFEVLK----KGG-KTVAVSNMPQVMIDSFLRDY--LDIDLVVGRELKVFCGYFVGLMEDKK 205 (543)
Q Consensus 134 va~avlpk~~~e-~l~~ea~~~~~----~~g-~~v~VSAsp~~~vepfak~~--lG~d~VlgTelev~~G~~TG~~~g~~ 205 (543)
+++++...+... .+.|.+.+.++ ++| ++++|||+|+.+++|++++. +|.|+||||++|+.+| |++.|.|
T Consensus 81 ~~~~f~~~~~~~~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~~~i~t~le~~~g---g~~~g~~ 157 (210)
T TIGR01545 81 LEADFVAAFRDKVTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRLNLIASQIERGNG---GWVLPLR 157 (210)
T ss_pred HHHHHHHHHHHhCCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccCcEEEEEeEEeCC---ceEcCcc
Confidence 888876655443 47899999884 357 88899999999999999752 4558999999999777 9999999
Q ss_pred C-cHHHHHHHHHHhcCC--ceEEEeCCCCCcchhcccccccCceeeccCCcc
Q 042170 206 K-NILVLQEIIKQENSG--DVIGISSLNSSLDHYKLFLQQCNEVYLVRSTDK 254 (543)
Q Consensus 206 ~-g~~Kv~~l~~~~~~~--~~~aygD~~S~~D~~~m~L~~~~~~y~v~p~~~ 254 (543)
| |++|++||+++++.+ ..+|||| |.+|.| | |++|+|||+|||+++
T Consensus 158 c~g~~Kv~rl~~~~~~~~~~~~aYsD--S~~D~p-m-L~~a~~~~~Vnp~~~ 205 (210)
T TIGR01545 158 CLGHEKVAQLEQKIGSPLKLYSGYSD--SKQDNP-L-LAFCEHRWRVSKRGE 205 (210)
T ss_pred CCChHHHHHHHHHhCCChhheEEecC--CcccHH-H-HHhCCCcEEECcchH
Confidence 9 999999999999754 4579999 999999 9 899999999999664
No 5
>cd07991 LPLAT_LPCAT1-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LPCAT1-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as lysophosphatidylcholine acyltransferase 1 (LPCAT-1), glycerol-3-phosphate acyltransferase 3 (GPAT3), and similar sequences.
Probab=99.97 E-value=3.4e-30 Score=252.33 Aligned_cols=190 Identities=23% Similarity=0.244 Sum_probs=148.6
Q ss_pred cCeEEEEeccCCCCccccCcccccCCCceEEEecCCCCCcHHHHHHhhcCceeEEeee-hhh---hhhhhhcCceeEeec
Q 042170 321 SGLRFTVITKPKTSRSFQNSRDCQKTERTLYVCNHRTLLDPLYLSFALKKNLTAVTYS-LSR---MSEILAPIKTVRMTR 396 (543)
Q Consensus 321 ~Gvrv~v~G~~~~~~~~~~~~~~~~~~~~l~VaNH~S~LD~~vl~a~l~~~~~~va~s-l~~---v~~~l~~i~tv~v~R 396 (543)
.|++++|+|.++.| ++|+|+||||+|++|++++.++ .+..++++. +.+ ++.++...|+++|+|
T Consensus 9 ~~~~~~v~g~~~~p-----------~~~~iiv~NH~S~~D~~~l~~~--~~~~fv~k~el~~~p~~g~~~~~~g~i~v~R 75 (211)
T cd07991 9 GFYVIKVHGKPDPP-----------EAPRIIVANHTSFIDPLILFSD--LFPSIVAKKELGKLPFIGTILRALGCIFVDR 75 (211)
T ss_pred EEEEEEEECCCCCC-----------CCCeEEEECCCcHHHHHHHhhh--cCcEEEEehhhccCcHHHHHHHhCCceEEeC
Confidence 57899999999875 4799999999999999999998 667788864 222 334455679999999
Q ss_pred CchH----HHHHHHHHHhC--C-CeEEecCccccCCCcccccchhhhhcCCceEEEEEEecccccc-ccccCCcccccch
Q 042170 397 NRDQ----DAKLVKSLLNQ--G-DLVICPEGTTCREPYLLRFSPLFAEMSDNIIPVASNSHVTMFY-GTTAGGLKCLDPF 468 (543)
Q Consensus 397 ~r~~----~~~~~~~~L~~--G-~l~iFPEGTtt~g~~Ll~F~~~fa~l~~pV~PVaI~~~~~~~~-gt~~~~~~~~d~~ 468 (543)
++.. ..+++.+.+++ | .|+||||||++++..+++|+++++....|||||+|+|...... .....++..+..+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~g~~v~iFPEGtrs~~~~l~~Fk~gaf~~~~pI~Pv~i~~~~~~~~~~~~~~~~~~~~~l 155 (211)
T cd07991 76 SEPKDRKKVVEEIKERATDPNWPPILIFPEGTTTNGKALIMFKKGAFEPGVPVQPVAIRYPNKFVDAFWNSSGYSSLMYL 155 (211)
T ss_pred CCchhHHHHHHHHHHHHhCCCCCeEEEecCccccCCCEEEeeccccccCCCeeEEEEEEecCccCCcccCCCCccHHHHH
Confidence 6532 34666777774 4 4999999999999999999999998888999999999764211 0011122212233
Q ss_pred hc-ccCCCCeEEEEEcccccCCcccCCCCCCHHHHHHHHHHHHHHHhCCCccCCChhhHH
Q 042170 469 FF-LMNPSPGYTMQLLEGVSGLSMCQDGNESRFDVANYVQSELGKALGFECTKLTRRDKY 527 (543)
Q Consensus 469 ~~-l~~P~~~v~V~fL~pi~~~~~~~~~~~~~~elA~~vq~~Ia~~Lg~~~T~~T~~Dk~ 527 (543)
|. +..|...++|+||+||.++ . ++++++++++++|++|++.||.++|.+|++||+
T Consensus 156 ~~~l~~~~~~v~v~~l~pi~~~-~---~~~~~~~l~~~v~~~i~~~l~~~~~~~~~~~~~ 211 (211)
T cd07991 156 FRLLTQPANVLEVEFLPVYTPS-E---EGEDPKEFANRVRLIMANKLGLPATDWTGEDKR 211 (211)
T ss_pred HHHhCCcceEEEEEECCCcccc-c---CCCCHHHHHHHHHHHHHHhcCCCccCCCCcccC
Confidence 43 4567777999999999984 2 468999999999999999999999999999996
No 6
>PLN02833 glycerol acyltransferase family protein
Probab=99.94 E-value=4.6e-26 Score=240.43 Aligned_cols=189 Identities=15% Similarity=0.187 Sum_probs=139.2
Q ss_pred HHHHHHcCeEEEEeccCCCCccccCcccccCCCceEEEecCCCCCcHHHHHHhhcCceeEEeee-hhhhh----hhhhcC
Q 042170 315 TPTLIFSGLRFTVITKPKTSRSFQNSRDCQKTERTLYVCNHRTLLDPLYLSFALKKNLTAVTYS-LSRMS----EILAPI 389 (543)
Q Consensus 315 ~~ll~~~Gvrv~v~G~~~~~~~~~~~~~~~~~~~~l~VaNH~S~LD~~vl~a~l~~~~~~va~s-l~~v~----~~l~~i 389 (543)
+.++...+..++++|.++.+ .+++|+||||+||+|++++.+..| ..+++++ ...++ .++...
T Consensus 142 ~~~~~~~~~~i~v~G~e~~~-----------~~~~IiVaNH~S~lDi~vL~s~~p--~~~v~kk~~~~~~~~~~~~~~~~ 208 (376)
T PLN02833 142 SAFVASWTGVIKYHGPRPSR-----------RPKQVFVANHTSMIDFIVLEQMTP--FAVIMQKHPGWVGFLQNTILESV 208 (376)
T ss_pred HHHHHHhEEEEEEECCcCCC-----------CCCEEEEECCCChHHHHHHHhhcC--ceEEEEehhhhhHHHHHHHHHHc
Confidence 34444555668999987643 468999999999999999999854 4455543 22222 234567
Q ss_pred ceeEeecCchHHHH----HHHHHHh--CCC-eEEecCccccCCCcccccchhhhhcCCceEEEEEEeccccccccccC--
Q 042170 390 KTVRMTRNRDQDAK----LVKSLLN--QGD-LVICPEGTTCREPYLLRFSPLFAEMSDNIIPVASNSHVTMFYGTTAG-- 460 (543)
Q Consensus 390 ~tv~v~R~r~~~~~----~~~~~L~--~G~-l~iFPEGTtt~g~~Ll~F~~~fa~l~~pV~PVaI~~~~~~~~gt~~~-- 460 (543)
|+++|+|+..++.+ ++++.++ +|. |+||||||++++..+++||++++++..|||||+|+|..... +.-+.
T Consensus 209 g~I~VdR~~~~~~~~~~~~l~~~l~~~~G~~llIFPEGTrs~~~~l~~FK~Gaf~~g~pI~PVaI~y~~~~~-~~fW~s~ 287 (376)
T PLN02833 209 GCIWFNRTEAKDREVVAKKLRDHVQDPDRNPLLIFPEGTCVNNEYTVMFKKGAFELGCTVCPIAIKYNKIFV-DAFWNSR 287 (376)
T ss_pred CcEEecCCCHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCcccccchhhHhcCCeEEEEEEEecCccc-ccccCCC
Confidence 99999996544443 4455555 575 99999999999999999999999999999999999985321 11111
Q ss_pred Ccccccchhccc-CCCCeEEEEEcccccCCcccCCCCCCHHHHHHHHHHHHHHHhCCCccCCC
Q 042170 461 GLKCLDPFFFLM-NPSPGYTMQLLEGVSGLSMCQDGNESRFDVANYVQSELGKALGFECTKLT 522 (543)
Q Consensus 461 ~~~~~d~~~~l~-~P~~~v~V~fL~pi~~~~~~~~~~~~~~elA~~vq~~Ia~~Lg~~~T~~T 522 (543)
...+...+|.+| .|...++|+||+|++.+ ++++++++|+++|+.|++++|+..+.+.
T Consensus 288 ~~s~~~~l~~ll~~~~~~v~V~~LpPi~~~-----~~e~~~efA~rv~~~Ia~~lgi~~~~wd 345 (376)
T PLN02833 288 KQSFTMHLLRLMTSWAVVCDVWYLEPQTLR-----PGETPIEFAERVRDMIAKRAGLKKVPWD 345 (376)
T ss_pred CccHHHhHHHHhCCCceEEEEEECCCcCCC-----CCCCHHHHHHHHHHHHHHhcCCCCCCCC
Confidence 112233444444 56677999999999872 4689999999999999999999988874
No 7
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=99.94 E-value=4.6e-26 Score=219.56 Aligned_cols=184 Identities=16% Similarity=0.177 Sum_probs=146.1
Q ss_pred EEEEEcCCccccCCCchHHHHHHHHhhcchHHHHHHHHHHHHHHhcc----cchhHHHHHHHHhcCcccchhH-HHHhhc
Q 042170 65 TLIFNVEGFLLKSSSLFPYFMLVAFEAGGLIRAFLLFILYPLICLAG----EEMGLKIMVMVSFFWVKKDNFR-VGRAVL 139 (543)
Q Consensus 65 ~a~FD~DGTLl~~~s~fp~f~~~a~~~~~~~r~~~ll~~~p~~~~l~----~~~~~k~~~~~~f~G~~~~~~~-va~avl 139 (543)
+|+|||||||++++|+++|+..+....+...+..+....+++...+. .....+.+.+..+.|++.++++ ++++++
T Consensus 1 ~a~FD~DgTL~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~ 80 (202)
T TIGR01490 1 LAFFDFDGTLTAKDTLFIFLKFLASKNILFEELRLPKVLARFEFFLNRGLDYMAYYRAFALDALAGLLEEDVRAIVEEFV 80 (202)
T ss_pred CeEEccCCCCCCCchHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 48999999999999999986655443323323433333333333222 2333445566678899999999 999999
Q ss_pred hhhHHHhcCHHHHHHHH---hCC-cEEEEeCCcHHHHHHHHHhhCCCcEEEeceEEE-eCeEEeeeeccCCC-cHHHHHH
Q 042170 140 PKFFLENVGLEIFEVLK---KGG-KTVAVSNMPQVMIDSFLRDYLDIDLVVGRELKV-FCGYFVGLMEDKKK-NILVLQE 213 (543)
Q Consensus 140 pk~~~e~l~~ea~~~~~---~~g-~~v~VSAsp~~~vepfak~~lG~d~VlgTelev-~~G~~TG~~~g~~~-g~~Kv~~ 213 (543)
++++...+.+++.+.++ +.| ++++||++++.+++++++. +|+|+++|+++++ .+|.+||++.+.+| |++|+++
T Consensus 81 ~~~~~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~-lg~~~~~~~~l~~~~~g~~~g~~~~~~~~g~~K~~~ 159 (202)
T TIGR01490 81 NQKIESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARI-LGIDNAIGTRLEESEDGIYTGNIDGNNCKGEGKVHA 159 (202)
T ss_pred HHHHHHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHH-cCCcceEecceEEcCCCEEeCCccCCCCCChHHHHH
Confidence 98888889999988776 567 8889999999999999985 9999999999998 78999999999998 8999999
Q ss_pred HHHHhcCC-----ceEEEeCCCCCcchhcccccccCceeeccCCc
Q 042170 214 IIKQENSG-----DVIGISSLNSSLDHYKLFLQQCNEVYLVRSTD 253 (543)
Q Consensus 214 l~~~~~~~-----~~~aygD~~S~~D~~~m~L~~~~~~y~v~p~~ 253 (543)
++++++.. ..++||| |.+|.| | ++.|+++|+|||++
T Consensus 160 l~~~~~~~~~~~~~~~~~gD--s~~D~~-~-~~~a~~~~~v~~~~ 200 (202)
T TIGR01490 160 LAELLAEEQIDLKDSYAYGD--SISDLP-L-LSLVGHPYVVNPDK 200 (202)
T ss_pred HHHHHHHcCCCHHHcEeeeC--CcccHH-H-HHhCCCcEEeCCCC
Confidence 99887532 4579999 999999 9 79999999999854
No 8
>PRK11590 hypothetical protein; Provisional
Probab=99.94 E-value=1e-25 Score=220.58 Aligned_cols=181 Identities=14% Similarity=0.171 Sum_probs=131.3
Q ss_pred cCeEEEEEcCCccccCCCchHHHHHHHHhhcchHHHHHHHHHHHHHHh-cccchhH-----HHHHHHHhcCcccchhH-H
Q 042170 62 SERTLIFNVEGFLLKSSSLFPYFMLVAFEAGGLIRAFLLFILYPLICL-AGEEMGL-----KIMVMVSFFWVKKDNFR-V 134 (543)
Q Consensus 62 ~~~~a~FD~DGTLl~~~s~fp~f~~~a~~~~~~~r~~~ll~~~p~~~~-l~~~~~~-----k~~~~~~f~G~~~~~~~-v 134 (543)
.+++++|||||||+.+++...+ +...+...++.... ..-..++.-+ +....+. ..+++..+.|+++++++ +
T Consensus 5 ~~k~~iFD~DGTL~~~d~~~~~-~~~~~~~~g~~~~~-~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 82 (211)
T PRK11590 5 ERRVVFFDLDGTLHQQDMFGSF-LRYLLRRQPLNLLL-VLPLLPVIGLGLLVKGRAARWPMSLLLWGCTFGHSEARLQAL 82 (211)
T ss_pred cceEEEEecCCCCcccchHHHH-HHHHHHhcchhhHH-HhHHHHHhccCcccchhhhhhhHHHHHHHHHcCCCHHHHHHH
Confidence 5689999999999977655444 55553444422111 0101111111 1121112 23344445699888888 7
Q ss_pred HHhhchhhHHH--hcCHHHHHHHH----hCC-cEEEEeCCcHHHHHHHHHhhCC---CcEEEeceEEEeCeEEeeeeccC
Q 042170 135 GRAVLPKFFLE--NVGLEIFEVLK----KGG-KTVAVSNMPQVMIDSFLRDYLD---IDLVVGRELKVFCGYFVGLMEDK 204 (543)
Q Consensus 135 a~avlpk~~~e--~l~~ea~~~~~----~~g-~~v~VSAsp~~~vepfak~~lG---~d~VlgTelev~~G~~TG~~~g~ 204 (543)
++++... |.+ .+.|++.+.++ ++| ++++||++|+.+++++++. +| +|++|||++++ +|||++.|.
T Consensus 83 ~~~f~~~-~~~~~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~-l~~~~~~~~i~t~l~~---~~tg~~~g~ 157 (211)
T PRK11590 83 EADFVRW-FRDNVTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFD-TPWLPRVNLIASQMQR---RYGGWVLTL 157 (211)
T ss_pred HHHHHHH-HHHhCcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHH-ccccccCceEEEEEEE---EEccEECCc
Confidence 7765443 344 35788888773 467 8889999999999999986 88 58999999987 799999999
Q ss_pred CC-cHHHHHHHHHHhcCC--ceEEEeCCCCCcchhcccccccCceeeccCCc
Q 042170 205 KK-NILVLQEIIKQENSG--DVIGISSLNSSLDHYKLFLQQCNEVYLVRSTD 253 (543)
Q Consensus 205 ~~-g~~Kv~~l~~~~~~~--~~~aygD~~S~~D~~~m~L~~~~~~y~v~p~~ 253 (543)
|| |++|+++|+++++.. ..+|||| |.+|+| | |++|++||+|||.+
T Consensus 158 ~c~g~~K~~~l~~~~~~~~~~~~aY~D--s~~D~p-m-L~~a~~~~~vnp~~ 205 (211)
T PRK11590 158 RCLGHEKVAQLERKIGTPLRLYSGYSD--SKQDNP-L-LYFCQHRWRVTPRG 205 (211)
T ss_pred cCCChHHHHHHHHHhCCCcceEEEecC--CcccHH-H-HHhCCCCEEECccH
Confidence 99 999999999999754 4579999 999999 9 89999999999965
No 9
>PRK15018 1-acyl-sn-glycerol-3-phosphate acyltransferase; Provisional
Probab=99.93 E-value=2.6e-24 Score=215.86 Aligned_cols=175 Identities=16% Similarity=0.164 Sum_probs=133.3
Q ss_pred hHHHHHHHcCeEEEEeccCCCCccccCcccccCCCceEEEecCCCCCcHHHHHHhhcCceeEEeee-hhh---hhhhhhc
Q 042170 313 ISTPTLIFSGLRFTVITKPKTSRSFQNSRDCQKTERTLYVCNHRTLLDPLYLSFALKKNLTAVTYS-LSR---MSEILAP 388 (543)
Q Consensus 313 ~~~~ll~~~Gvrv~v~G~~~~~~~~~~~~~~~~~~~~l~VaNH~S~LD~~vl~a~l~~~~~~va~s-l~~---v~~~l~~ 388 (543)
+...++.++|++++++|.++.| +++|+|+||||+|++|++++..+++.+..+++|+ +.+ ++.++..
T Consensus 41 ~~~~~~~~~g~~v~v~g~e~~p----------~~~~~IivaNH~S~lD~~~l~~~~~~~~~fvaK~el~~~P~~g~~~~~ 110 (245)
T PRK15018 41 MFGRLAPLFGLKVECRKPADAE----------SYGNAIYIANHQNNYDMVTASNIVQPPTVTVGKKSLLWIPFFGQLYWL 110 (245)
T ss_pred HHHHHHHHcCeEEEEEccCCCC----------CCCCEEEEECCCchHHHHHHHHHhCCCcEEEEeHHHhhCCHHHHHHHh
Confidence 4455677999999999998875 2579999999999999999988888788888874 333 2334556
Q ss_pred CceeEeecCc-hHHH---HHHHHHHhC-CC-eEEecCccccCCCcccccchhhhhcC----CceEEEEEEeccccccccc
Q 042170 389 IKTVRMTRNR-DQDA---KLVKSLLNQ-GD-LVICPEGTTCREPYLLRFSPLFAEMS----DNIIPVASNSHVTMFYGTT 458 (543)
Q Consensus 389 i~tv~v~R~r-~~~~---~~~~~~L~~-G~-l~iFPEGTtt~g~~Ll~F~~~fa~l~----~pV~PVaI~~~~~~~~gt~ 458 (543)
.|.++|+|+. +++. ++..+.+++ |. ++||||||+++++.+++||++++.++ .||+||+|.++...+.
T Consensus 111 ~g~i~VdR~~~~~~~~~l~~~~~~l~~~g~sv~IFPEGTRs~~g~l~~Fk~Ga~~lA~~~~~PIvPv~i~g~~~~~~--- 187 (245)
T PRK15018 111 TGNLLIDRNNRTKAHGTIAEVVNHFKKRRISIWMFPEGTRSRGRGLLPFKTGAFHAAIAAGVPIIPVCVSTTSNKIN--- 187 (245)
T ss_pred CCCeEEeCCCHHHHHHHHHHHHHHHHhCCCEEEEECCccCCCCCCCCCccHHHHHHHHHcCCCEEEEEEECcccccc---
Confidence 7999999953 3333 334455654 64 99999999999999999999887655 4999999998754332
Q ss_pred cCCcccccchhcccCCCCeEEEEEcccccCCcccCCCCCCHHHHHHHHHHHHHHHh
Q 042170 459 AGGLKCLDPFFFLMNPSPGYTMQLLEGVSGLSMCQDGNESRFDVANYVQSELGKAL 514 (543)
Q Consensus 459 ~~~~~~~d~~~~l~~P~~~v~V~fL~pi~~~~~~~~~~~~~~elA~~vq~~Ia~~L 514 (543)
.+ . +.|. .++|+|++||++++. ..++.+++++++++.|.+.+
T Consensus 188 --~~-------~-~~~g-~i~v~~~~PI~~~~~---~~~~~~~l~~~v~~~i~~~~ 229 (245)
T PRK15018 188 --LN-------R-LHNG-LVIVEMLPPIDVSQY---GKDQVRELAAHCRSIMEQKI 229 (245)
T ss_pred --cC-------C-ccCe-eEEEEEcCCCcCCCC---ChhhHHHHHHHHHHHHHHHH
Confidence 01 1 2343 499999999998542 23678999999999999976
No 10
>KOG2848 consensus 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid transport and metabolism]
Probab=99.92 E-value=8.7e-25 Score=214.39 Aligned_cols=181 Identities=19% Similarity=0.214 Sum_probs=140.0
Q ss_pred hHhHHHHHHHcCeEEEEeccCCCCccccCcccccCCCceEEEecCCCCCcHHHHHHhhcCceeEEeee-hhhhh--hhhh
Q 042170 311 FEISTPTLIFSGLRFTVITKPKTSRSFQNSRDCQKTERTLYVCNHRTLLDPLYLSFALKKNLTAVTYS-LSRMS--EILA 387 (543)
Q Consensus 311 ~~~~~~ll~~~Gvrv~v~G~~~~~~~~~~~~~~~~~~~~l~VaNH~S~LD~~vl~a~l~~~~~~va~s-l~~v~--~~l~ 387 (543)
..|...+-.+.|+|++|+|.|+.+ +++|+|+||||+|.||++.+..++|.....++|. +..++ +|..
T Consensus 63 ~~~~~~~~y~~g~r~ev~g~E~L~----------~~~p~ViVsNHQS~LDil~m~~i~p~~cvviaKr~L~yvp~~gl~m 132 (276)
T KOG2848|consen 63 KLWFHSMKYLLGLRFEVRGEENLP----------KSKPAVIVSNHQSSLDILGMGSIWPKNCVVIAKRSLFYVPIFGLAM 132 (276)
T ss_pred HHHHHHHhhhcceEEEEechhhCC----------ccCCeEEEecchhHHHHHHHHhhcCCceEEEEeeeeeecchHHHHH
Confidence 346666777899999999999987 3569999999999999999999999888888874 32222 2222
Q ss_pred c-CceeEeecCchHH-HHHH---HHHHhCCC--eEEecCccccCCCcccccchhhhhcCC----ceEEEEEEeccccccc
Q 042170 388 P-IKTVRMTRNRDQD-AKLV---KSLLNQGD--LVICPEGTTCREPYLLRFSPLFAEMSD----NIIPVASNSHVTMFYG 456 (543)
Q Consensus 388 ~-i~tv~v~R~r~~~-~~~~---~~~L~~G~--l~iFPEGTtt~g~~Ll~F~~~fa~l~~----pV~PVaI~~~~~~~~g 456 (543)
+ .|++||+|.|+++ .+.+ .+.+++++ |-||||||+++++.|+|||+++|.++. ||+||++.....+++
T Consensus 133 ~L~gvvfIdR~r~~~Ai~~l~~~~~~mkk~~~kvWvFPEGTRn~~g~llPFKKGAF~lAvqaqVPIVPvv~ssy~~f~~- 211 (276)
T KOG2848|consen 133 YLSGVVFIDRSRREKAIDTLDKCAERMKKENRKVWVFPEGTRNKEGRLLPFKKGAFHLAVQAQVPIVPVVFSSYGDFYS- 211 (276)
T ss_pred HHcCceEEecCCHHHHHHHHHHHHHHHHhCCeeEEEccCCccCCCCcccccccceeeeehhcCCCEEEEEEeccccccc-
Confidence 2 4899999976554 3444 34455553 889999999999999999999998874 999999998776553
Q ss_pred cccCCcccccchhcccCCCCeEEEEEcccccCCcccCCCCCCHHHHHHHHHHHHHHHhCC
Q 042170 457 TTAGGLKCLDPFFFLMNPSPGYTMQLLEGVSGLSMCQDGNESRFDVANYVQSELGKALGF 516 (543)
Q Consensus 457 t~~~~~~~~d~~~~l~~P~~~v~V~fL~pi~~~~~~~~~~~~~~elA~~vq~~Ia~~Lg~ 516 (543)
+. .+ .++. ..+.|++|+||++|+. ..+|-.++++++|.+|.+.+..
T Consensus 212 ~~---~k-------~f~s-G~v~V~vL~pI~Tegl---T~ddv~~L~~~~R~~M~~~~~e 257 (276)
T KOG2848|consen 212 TK---EK-------VFNS-GNVIVRVLPPIPTEGL---TKDDVDVLSDECRSAMLETFKE 257 (276)
T ss_pred Cc---cc-------eeec-ceEEEEEcCCCCccCC---CcccHHHHHHHHHHHHHHHHHH
Confidence 11 11 1233 3599999999999654 3457889999999999998754
No 11
>PLN02901 1-acyl-sn-glycerol-3-phosphate acyltransferase
Probab=99.86 E-value=1.3e-21 Score=192.39 Aligned_cols=168 Identities=17% Similarity=0.231 Sum_probs=127.2
Q ss_pred HcCeEEEEeccCCCCccccCcccccCCCceEEEecCCCCCcHHHHHHhhcCceeEEeee-hhh---hhhhhhcCceeEee
Q 042170 320 FSGLRFTVITKPKTSRSFQNSRDCQKTERTLYVCNHRTLLDPLYLSFALKKNLTAVTYS-LSR---MSEILAPIKTVRMT 395 (543)
Q Consensus 320 ~~Gvrv~v~G~~~~~~~~~~~~~~~~~~~~l~VaNH~S~LD~~vl~a~l~~~~~~va~s-l~~---v~~~l~~i~tv~v~ 395 (543)
..++++++.|.++.| +.++|+|+||||.|++|++++.+ +++++.++++. +.. ++.++...|+++|+
T Consensus 32 ~~~~~~~v~g~e~lp---------~~~~p~iiv~NH~S~~D~~~l~~-~~~~~~~v~k~~l~~~P~~g~~~~~~~~i~v~ 101 (214)
T PLN02901 32 SPFYKIEVEGLENLP---------SPDEPAVYVSNHQSFLDIYTLFH-LGRPFKFISKTSIFLIPIIGWAMYMTGHIPLK 101 (214)
T ss_pred hcceeEEEECCccCC---------CCCCcEEEEECCCCchHHHHHhh-cCCceEEEEEHHhhhccHHHHHHHHCCcEEEe
Confidence 468899999998876 12579999999999999998865 45778888864 222 23345567999999
Q ss_pred cCchH----HHHHHHHHHhCCC-eEEecCccccCCCcccccchhhhhcC----CceEEEEEEeccccccccccCCccccc
Q 042170 396 RNRDQ----DAKLVKSLLNQGD-LVICPEGTTCREPYLLRFSPLFAEMS----DNIIPVASNSHVTMFYGTTAGGLKCLD 466 (543)
Q Consensus 396 R~r~~----~~~~~~~~L~~G~-l~iFPEGTtt~g~~Ll~F~~~fa~l~----~pV~PVaI~~~~~~~~gt~~~~~~~~d 466 (543)
|+..+ ..+++.+.|++|. ++||||||++.++.+.+|+++++.++ .||+||++.+....++ .+.+
T Consensus 102 R~~~~~~~~~~~~~~~~l~~g~~v~IfPEGtr~~~~~~~~f~~G~~~lA~~~~~pIvPv~i~g~~~~~~----~~~~--- 174 (214)
T PLN02901 102 RMDRRSQLECLKRCMELLKKGASVFFFPEGTRSKDGKLAAFKKGAFSVAAKTGVPVVPITLVGTGKIMP----NGKE--- 174 (214)
T ss_pred cCCcHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCCCcccCchhhHHHHHHHcCCCEEEEEEecchhhCc----CCCc---
Confidence 95332 2455677889996 89999999998889999998877654 4999999998765443 1111
Q ss_pred chhcccCCCCeEEEEEcccccCCcccCCCCCCHHHHHHHHHHHHHHHhCC
Q 042170 467 PFFFLMNPSPGYTMQLLEGVSGLSMCQDGNESRFDVANYVQSELGKALGF 516 (543)
Q Consensus 467 ~~~~l~~P~~~v~V~fL~pi~~~~~~~~~~~~~~elA~~vq~~Ia~~Lg~ 516 (543)
....+. .++|+|++||++ .+++++++++++.|.+.++.
T Consensus 175 ---~~~~~~-~i~v~~~~pi~~--------~~~~~l~~~~~~~i~~~~~~ 212 (214)
T PLN02901 175 ---GILNPG-SVKVVIHPPIEG--------SDADELCNEARKVIAESLVQ 212 (214)
T ss_pred ---ccccCC-eEEEEECCCcCC--------CCHHHHHHHHHHHHHHHhhh
Confidence 122344 499999999986 26889999999999998764
No 12
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=99.86 E-value=2.8e-21 Score=189.98 Aligned_cols=174 Identities=16% Similarity=0.152 Sum_probs=127.9
Q ss_pred cCeEEEEEcCCccccCCCchHHHHHHHHhhcchHHHHHHHHHHHHHH-hcccchhHHHHHHHHhcCcccchhH-HHHhhc
Q 042170 62 SERTLIFNVEGFLLKSSSLFPYFMLVAFEAGGLIRAFLLFILYPLIC-LAGEEMGLKIMVMVSFFWVKKDNFR-VGRAVL 139 (543)
Q Consensus 62 ~~~~a~FD~DGTLl~~~s~fp~f~~~a~~~~~~~r~~~ll~~~p~~~-~l~~~~~~k~~~~~~f~G~~~~~~~-va~avl 139 (543)
.+++++|||||||+.. ..+.+ +....+.+........ .... .+.-+...+ .-...+.|++.++++ +.+++
T Consensus 4 ~~~L~vFD~D~TLi~~-~~~~~-~~~~~g~~~~v~~~t~----~~~~~~~~~~~~~~-~~v~~l~g~~~~~v~~~~~~~- 75 (212)
T COG0560 4 MKKLAVFDLDGTLINA-ELIDE-LARGAGVGEEVLAITE----RAMRGELDFEESLR-LRVALLKGLPVEVLEEVREEF- 75 (212)
T ss_pred ccceEEEecccchhhH-HHHHH-HHHHhCCHHHHHHHHH----HHhcccccHHHHHH-HHHHHhCCCCHHHHHHHHHhc-
Confidence 4679999999999983 44443 2222222222211111 1100 010012222 223345699999999 88876
Q ss_pred hhhHHHhcCHHHHHHHH---hCC-cEEEEeCCcHHHHHHHHHhhCCCcEEEeceEEEeCeEEeeeeccCCC-cHHHHHHH
Q 042170 140 PKFFLENVGLEIFEVLK---KGG-KTVAVSNMPQVMIDSFLRDYLDIDLVVGRELKVFCGYFVGLMEDKKK-NILVLQEI 214 (543)
Q Consensus 140 pk~~~e~l~~ea~~~~~---~~g-~~v~VSAsp~~~vepfak~~lG~d~VlgTelev~~G~~TG~~~g~~~-g~~Kv~~l 214 (543)
..+.|.+.+.++ +.| ++++||++|..+++|++++ +|+|.++++++++.||+|||++.|..| +++|+.++
T Consensus 76 -----~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~-lg~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l 149 (212)
T COG0560 76 -----LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAER-LGIDYVVANELEIDDGKLTGRVVGPICDGEGKAKAL 149 (212)
T ss_pred -----CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHH-hCCchheeeEEEEeCCEEeceeeeeecCcchHHHHH
Confidence 236677766555 677 9999999999999999986 999999999999999999999999999 79999999
Q ss_pred HHHhcCC-----ceEEEeCCCCCcchhcccccccCceeeccCCc
Q 042170 215 IKQENSG-----DVIGISSLNSSLDHYKLFLQQCNEVYLVRSTD 253 (543)
Q Consensus 215 ~~~~~~~-----~~~aygD~~S~~D~~~m~L~~~~~~y~v~p~~ 253 (543)
++++... ..+|||| |.+|.| | |+.|++++++||.+
T Consensus 150 ~~~~~~~g~~~~~~~a~gD--s~nDlp-m-l~~ag~~ia~n~~~ 189 (212)
T COG0560 150 RELAAELGIPLEETVAYGD--SANDLP-M-LEAAGLPIAVNPKP 189 (212)
T ss_pred HHHHHHcCCCHHHeEEEcC--chhhHH-H-HHhCCCCeEeCcCH
Confidence 9987632 5789999 999999 9 79999999999954
No 13
>cd07992 LPLAT_AAK14816-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown AAK14816-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are uncharacterized glycerol-3-phosphate acyltransferases such as the Plasmodium falciparum locus AAK14816 putative acyltransferase, and similar proteins.
Probab=99.84 E-value=3.4e-20 Score=180.41 Aligned_cols=173 Identities=23% Similarity=0.287 Sum_probs=130.2
Q ss_pred hHhHHHHHHHcCeEEEEeccCCCCccccCcccccCCCceEEEecCC-CCCcHHHHHHhhcCceeEEeee-h---hhhhhh
Q 042170 311 FEISTPTLIFSGLRFTVITKPKTSRSFQNSRDCQKTERTLYVCNHR-TLLDPLYLSFALKKNLTAVTYS-L---SRMSEI 385 (543)
Q Consensus 311 ~~~~~~ll~~~Gvrv~v~G~~~~~~~~~~~~~~~~~~~~l~VaNH~-S~LD~~vl~a~l~~~~~~va~s-l---~~v~~~ 385 (543)
+.|++.++++.+.+++|.|.++.| .++|+|+||||. |++|++++.+++++++++++++ + ..++.+
T Consensus 2 ~~~~~~~~~~~~~~v~v~G~e~lp----------~~~~~I~v~NH~~s~~D~~~l~~~~~~~~~~v~~~~~~~~p~~~~~ 71 (203)
T cd07992 2 RLLSRVILRIYFRRITVVGRENVP----------KDGPVIFLGNHPNALIDPLLLAATLRRPVRFLAKADLFKNPLIGWL 71 (203)
T ss_pred eEehhehhhhEeeeeEEECCccCC----------CCCCEEEEeCCccchhhHHHHHHhcCCCcEEEEEhhhccchHHHHH
Confidence 357888899999999999999876 257999999999 7999999999888899998864 2 223455
Q ss_pred hhcCceeEeecCch------------HHHHHHHHHHhCCC-eEEecCccccCCCcccccchhhhhcC----------Cce
Q 042170 386 LAPIKTVRMTRNRD------------QDAKLVKSLLNQGD-LVICPEGTTCREPYLLRFSPLFAEMS----------DNI 442 (543)
Q Consensus 386 l~~i~tv~v~R~r~------------~~~~~~~~~L~~G~-l~iFPEGTtt~g~~Ll~F~~~fa~l~----------~pV 442 (543)
+..+|.++|+|++. +..+.+.+.|++|. ++||||||++.+..+.+|+++++.++ .||
T Consensus 72 ~~~~g~ipI~r~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~l~IFPEGtr~~~~~~~~fk~G~~~lA~~a~~~~~~~vpI 151 (203)
T cd07992 72 LESFGAIPVYRPKDLARGGIGKISNAAVFDAVGEALKAGGAIGIFPEGGSHDRPRLLPLKAGAARMALEALEAGQKDVKI 151 (203)
T ss_pred HHHcCceEeEcCCCcccccccchhHHHHHHHHHHHHhCCCEEEEeCCCCCCCCCCccCcCccHHHHHHHHHhcCCCCCeE
Confidence 66779999998531 23456778899996 99999999999889999999776443 399
Q ss_pred EEEEEEeccccccccccCCcccccchhcccCCCCeEEEEEcccccCCcccCCCCCCHHHHHHHHHHHHHHHh
Q 042170 443 IPVASNSHVTMFYGTTAGGLKCLDPFFFLMNPSPGYTMQLLEGVSGLSMCQDGNESRFDVANYVQSELGKAL 514 (543)
Q Consensus 443 ~PVaI~~~~~~~~gt~~~~~~~~d~~~~l~~P~~~v~V~fL~pi~~~~~~~~~~~~~~elA~~vq~~Ia~~L 514 (543)
+||+|.|.... .++..++|.|++|+.++... +.++..+.-..+..++-+.|
T Consensus 152 vPv~i~~~~~~-------------------~~~~~i~i~~g~pi~~~~~~--~~~~~~~~~~~~~~~~~~~~ 202 (203)
T cd07992 152 VPVGLNYEDKS-------------------RFRSRVLVEFGKPISVSAFE--EAEASRDVEKKLINQLEAEL 202 (203)
T ss_pred EeeeEEeCCCC-------------------CCCCeEEEEECCCccccccc--ccccchhHHHHHHHHHHHhh
Confidence 99999986421 12356999999999885432 22344555555555555544
No 14
>PTZ00261 acyltransferase; Provisional
Probab=99.83 E-value=8.3e-20 Score=189.60 Aligned_cols=153 Identities=16% Similarity=0.164 Sum_probs=109.3
Q ss_pred CCceEEEecCCCCCcHHHHHHhhcC----ceeEEeee-hhhh---hhhhhcCceeEeecCch---------HHH----HH
Q 042170 346 TERTLYVCNHRTLLDPLYLSFALKK----NLTAVTYS-LSRM---SEILAPIKTVRMTRNRD---------QDA----KL 404 (543)
Q Consensus 346 ~~~~l~VaNH~S~LD~~vl~a~l~~----~~~~va~s-l~~v---~~~l~~i~tv~v~R~r~---------~~~----~~ 404 (543)
++|+|++|||+|++|++++.+.+|. +..+++|+ +.++ +.++...|+++|+|++. +.. +.
T Consensus 128 ~~~~IivsNHqS~lDi~vl~~~~p~r~~~~~~fVAKkELfkiP~fG~~l~~~G~IPVdR~~~~~g~~~vdrea~~~v~~~ 207 (355)
T PTZ00261 128 RHGCAYVGNHTSFWDVYAFIGLTPFRHLLNTRTLMKSSLRKIPIFGGVFDRVGHFPVHFKSDSDGNFEVDKEKQAQVQQA 207 (355)
T ss_pred CCCEEEEECCCchHHHHHHHHHcccccccccEEEEHHHHhhccHHHHHHHHCCCeeeecccccccccccchHHHHHHHHH
Confidence 4689999999999999999999873 56788863 3332 33455679999998432 111 23
Q ss_pred HHHHHhCCC-eEEecCccccCCC-cccccchhhhhcC----CceEEEEEEeccccccccccCCcccccchhcccCCCCeE
Q 042170 405 VKSLLNQGD-LVICPEGTTCREP-YLLRFSPLFAEMS----DNIIPVASNSHVTMFYGTTAGGLKCLDPFFFLMNPSPGY 478 (543)
Q Consensus 405 ~~~~L~~G~-l~iFPEGTtt~g~-~Ll~F~~~fa~l~----~pV~PVaI~~~~~~~~gt~~~~~~~~d~~~~l~~P~~~v 478 (543)
+++.|++|. ++||||||+|+++ .+++||++++.++ .||+||++.++...+.. ++ .++.....+
T Consensus 208 ~~e~Lk~G~sLvIFPEGTRS~~gg~L~pFK~GaF~LAieagvPIVPvai~Gs~~~wP~----g~-------~l~~~pg~I 276 (355)
T PTZ00261 208 IDAHLRLGGSLAFFPEGAINKHPQVLQTFRYGTFATIIKHRMEVYYMVSVGSEKTWPW----WM-------MIGGLPADM 276 (355)
T ss_pred HHHHHHCCCEEEEECCcCCcCCCCcCCCCcHHHHHHHHHcCCCEEEEEEeChhhcCCC----CC-------ccCCCCceE
Confidence 346789996 9999999999976 5999999877554 49999999998766531 11 112222359
Q ss_pred EEEEcc-cccCCcccCCCCCCHHHHHHHHHHHHHHHhC
Q 042170 479 TMQLLE-GVSGLSMCQDGNESRFDVANYVQSELGKALG 515 (543)
Q Consensus 479 ~V~fL~-pi~~~~~~~~~~~~~~elA~~vq~~Ia~~Lg 515 (543)
+|+|++ ||+. ++.+.+++++++|+.|.+..+
T Consensus 277 ~V~iG~~PI~~------~~~~~~eL~~~lr~lmqe~~~ 308 (355)
T PTZ00261 277 HIRIGAYPIDY------DRDSSKDVAVGLQQRMQKVRD 308 (355)
T ss_pred EEEECCCCCCC------CCCCHHHHHHHHHHHHHHHHH
Confidence 999999 9987 345677776666666555543
No 15
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.81 E-value=1.1e-18 Score=208.04 Aligned_cols=176 Identities=16% Similarity=0.153 Sum_probs=127.7
Q ss_pred cCeEEEEeccCCCCccccCcccccCCCceEEEecCCCCCcHHHHHHhhcCceeEEeee-hhh---hhhhhhcCceeEeec
Q 042170 321 SGLRFTVITKPKTSRSFQNSRDCQKTERTLYVCNHRTLLDPLYLSFALKKNLTAVTYS-LSR---MSEILAPIKTVRMTR 396 (543)
Q Consensus 321 ~Gvrv~v~G~~~~~~~~~~~~~~~~~~~~l~VaNH~S~LD~~vl~a~l~~~~~~va~s-l~~---v~~~l~~i~tv~v~R 396 (543)
..++++++|.++.| ++++|+|+||||+||+|++++.+.+|++++|++|+ +.+ +..++...++++|+|
T Consensus 437 ~~~~~~~~g~~~~~---------~~~~~~i~~~nH~s~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r 507 (1140)
T PRK06814 437 AFYRVEVKGLENLQ---------KAGKKAVIAANHVSFLDGPLLAAYLPEEPTFAIDTDIAKAWWVKPFLKLAKALPVDP 507 (1140)
T ss_pred HeEEEEEeCCcccc---------ccCCCEEEEECCcchHHHHHHHHhCCCCeEEEEeHHHhhhhHHHHHHHhcCeeecCC
Confidence 46899999999986 12357999999999999999999999999999874 222 334556679999999
Q ss_pred CchHHHHHHHHHHhCCC-eEEecCccccCCCcccccchhhhhcC----CceEEEEEEecccc-ccccccCCcccccchhc
Q 042170 397 NRDQDAKLVKSLLNQGD-LVICPEGTTCREPYLLRFSPLFAEMS----DNIIPVASNSHVTM-FYGTTAGGLKCLDPFFF 470 (543)
Q Consensus 397 ~r~~~~~~~~~~L~~G~-l~iFPEGTtt~g~~Ll~F~~~fa~l~----~pV~PVaI~~~~~~-~~gt~~~~~~~~d~~~~ 470 (543)
++.+..+++.+.|++|+ ++||||||+++++.+.+||++++.++ .||+||+|.+.... |+. .-+.+ .
T Consensus 508 ~~~~~~~~~~~~l~~g~~~~ifPeGtr~~~~~~~~f~~g~~~~a~~~~~~i~pv~i~g~~~~~~~~-------~~~~~-~ 579 (1140)
T PRK06814 508 TNPMATRTLIKEVQKGEKLVIFPEGRITVTGSLMKIYDGPGMIADKAGAMVVPVRIDGLQFTHFSR-------LKNQV-R 579 (1140)
T ss_pred CChHHHHHHHHHHHCCCEEEEeCCCCCCCCCCccccchHHHHHHHHCCCCEEEEEEcCcccccccc-------cCCCc-c
Confidence 87777788888999997 89999999999999999999887654 49999999886532 210 00100 0
Q ss_pred ccCCCCeEEEEEcccccCCcccCCC-CCCHHHHHHHHHHHHHHHh
Q 042170 471 LMNPSPGYTMQLLEGVSGLSMCQDG-NESRFDVANYVQSELGKAL 514 (543)
Q Consensus 471 l~~P~~~v~V~fL~pi~~~~~~~~~-~~~~~elA~~vq~~Ia~~L 514 (543)
...++.+++++++|+.++...... .+.++.+.+++++.|.+.+
T Consensus 580 -~~~~~~~~~~~~~~i~~~~~~~l~~~e~r~~~~~~l~~~~~~~~ 623 (1140)
T PRK06814 580 -RKWFPKVTVTILPPVKLAVDPELKGRERRSAAGAALYDIMSDMM 623 (1140)
T ss_pred -cccCCceEEEecCCcccCCCccccchhhHHHHHHHHHHHHHHHH
Confidence 012245999999999874321111 2334455555666665543
No 16
>cd07988 LPLAT_ABO13168-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown ABO13168. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are uncharacterized phospholipid/glycerol acyltransferases such as the Acinetobacter baumannii ATCC 17978 locus ABO13168 putative acyltransferase, and similar proteins.
Probab=99.80 E-value=1.9e-19 Score=169.91 Aligned_cols=132 Identities=18% Similarity=0.173 Sum_probs=99.4
Q ss_pred HHHHHHcCeEEEEeccCCCCccccCcccccCCCceEEEecCCCCCcHHHHHHh---hcCceeEEeee-hhh--hhhhhhc
Q 042170 315 TPTLIFSGLRFTVITKPKTSRSFQNSRDCQKTERTLYVCNHRTLLDPLYLSFA---LKKNLTAVTYS-LSR--MSEILAP 388 (543)
Q Consensus 315 ~~ll~~~Gvrv~v~G~~~~~~~~~~~~~~~~~~~~l~VaNH~S~LD~~vl~a~---l~~~~~~va~s-l~~--v~~~l~~ 388 (543)
+.+++++|++++ |..+. +.+|+|+||||+|++|++++.++ +++++.++++. +.+ +..++..
T Consensus 2 ~~~~~~~g~~~~--g~~p~-----------~~~~~iiv~NH~S~~D~~~l~~~~~~~~~~~~~vak~~l~~~p~g~~~~~ 68 (163)
T cd07988 2 RLLLRLSGWRIE--GEPPN-----------KPKFVVIGAPHTSNWDFVLGLLAAFALGLKISFLGKHSLFKPPLGPFMRW 68 (163)
T ss_pred ceEEEecCEEEE--eEcCC-----------CCceEEEEECCCccHHHHHHHHHHHhcCCceEEEEEHHhhhCcHHHHHHH
Confidence 345677888764 55432 13699999999999999998876 46788999873 222 2344566
Q ss_pred CceeEeecCc-hHHHHHHHHHHhCC---CeEEecCccccCCCcccccchhhhhcC----CceEEEEEEeccccccccccC
Q 042170 389 IKTVRMTRNR-DQDAKLVKSLLNQG---DLVICPEGTTCREPYLLRFSPLFAEMS----DNIIPVASNSHVTMFYGTTAG 460 (543)
Q Consensus 389 i~tv~v~R~r-~~~~~~~~~~L~~G---~l~iFPEGTtt~g~~Ll~F~~~fa~l~----~pV~PVaI~~~~~~~~gt~~~ 460 (543)
+|+++|+|+. ++..+++.+.|++| .++||||||+++. .+|+++++.++ .||+||+|+|.+
T Consensus 69 ~g~i~V~r~~~~~~~~~~~~~l~~g~~~~l~IFPEGtR~~~---~~fk~G~~~lA~~~~~PIvPv~i~~~~--------- 136 (163)
T cd07988 69 LGGIPVDRSRAGGLVEQVVEEFRRREEFVLAIAPEGTRSKV---DKWKTGFYHIARGAGVPILLVYLDYKR--------- 136 (163)
T ss_pred cCCEEeEcCCcccHHHHHHHHHHhCCCcEEEEeCCCCCCCC---cChhhHHHHHHHHcCCCEEEEEEecCc---------
Confidence 7999999954 34567788888876 2899999999984 48998876554 499999998741
Q ss_pred CcccccchhcccCCCCeEEEEEcccccC
Q 042170 461 GLKCLDPFFFLMNPSPGYTMQLLEGVSG 488 (543)
Q Consensus 461 ~~~~~d~~~~l~~P~~~v~V~fL~pi~~ 488 (543)
.+|+|++||++
T Consensus 137 -----------------~~v~~g~pi~~ 147 (163)
T cd07988 137 -----------------KTVGIGPLFEP 147 (163)
T ss_pred -----------------EEEEECCcCcC
Confidence 47999999998
No 17
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.80 E-value=2e-18 Score=204.86 Aligned_cols=181 Identities=17% Similarity=0.202 Sum_probs=129.1
Q ss_pred cchhHhHHHHH---HHcCeEEEEeccCCCCccccCcccccCCCceEEEecCCCCCcHHHHHHhhcCceeEEeee-hh---
Q 042170 308 TLPFEISTPTL---IFSGLRFTVITKPKTSRSFQNSRDCQKTERTLYVCNHRTLLDPLYLSFALKKNLTAVTYS-LS--- 380 (543)
Q Consensus 308 ~lp~~~~~~ll---~~~Gvrv~v~G~~~~~~~~~~~~~~~~~~~~l~VaNH~S~LD~~vl~a~l~~~~~~va~s-l~--- 380 (543)
.+|..+.+.++ ..++.+++++|.++.| +++|+|+||||+|++|++++...+++++++++|+ +.
T Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~v~g~e~lp----------~~~~~i~~~nH~s~~D~~~~~~~~~~~~~~~~~~~~~~~~ 478 (1146)
T PRK08633 409 LLPDSLLRFLLLLLMHTRYRLRVEGRENIP----------AKGGALLLGNHVSWIDWALLQAASPRPIRFVMERSIYEKW 478 (1146)
T ss_pred HhHHHHHHHHHHHHHHceEEEEEECCcCCC----------CCCCEEEEECCCchHHHHHHHHHcCCCeEEEeeHHhhhCh
Confidence 34544444433 3466788999998875 2579999999999999999999999999999874 22
Q ss_pred hhhhhhhcCceeEeecCch-HHHHHHHHHHhCCC-eEEecCccccCCCcccccchhhhhcC----CceEEEEEEecc-cc
Q 042170 381 RMSEILAPIKTVRMTRNRD-QDAKLVKSLLNQGD-LVICPEGTTCREPYLLRFSPLFAEMS----DNIIPVASNSHV-TM 453 (543)
Q Consensus 381 ~v~~~l~~i~tv~v~R~r~-~~~~~~~~~L~~G~-l~iFPEGTtt~g~~Ll~F~~~fa~l~----~pV~PVaI~~~~-~~ 453 (543)
.+..++..+|+++|+|++. +..+.+++.|++|. |+||||||+++++.+.+||++++.++ .||+||+|.+.. ..
T Consensus 479 ~~~~~~~~~~~i~v~r~~~~~~~~~~~~~l~~g~~~~ifPeGt~~~~~~~~~~~~g~~~~a~~~~~~i~pv~~~g~~~~~ 558 (1146)
T PRK08633 479 YLKWFFKLFGVIPISSGGSKESLEFIRKALDDGEVVCIFPEGAITRNGQLNEFKRGFELIVKGTDVPIIPFYIRGLWGSI 558 (1146)
T ss_pred hHHHHHHHCCEEEecCCChHHHHHHHHHHHhCCCEEEEECCcCCCCCCCccchhHHHHHHHHHCCCCEEEEEEecccccc
Confidence 2344566679999999653 34678889999997 99999999999999999999887665 499999999742 22
Q ss_pred ccccccCCcccccchhcccCC-CCeEEEEEcccccCCcccCCCCCCHHHHHHHHHHHHH
Q 042170 454 FYGTTAGGLKCLDPFFFLMNP-SPGYTMQLLEGVSGLSMCQDGNESRFDVANYVQSELG 511 (543)
Q Consensus 454 ~~gt~~~~~~~~d~~~~l~~P-~~~v~V~fL~pi~~~~~~~~~~~~~~elA~~vq~~Ia 511 (543)
|.... ..+ .+....+ ...++|+|++||+++ ...+++.+.+++...
T Consensus 559 ~~~~~-~~~-----~~~~~~~~~~~v~v~~~~pi~~~-------~~~~~~~~~~~~l~~ 604 (1146)
T PRK08633 559 FSRAS-GKF-----LWRWPTRIPYPVTVAFGKPMPAH-------STAHEVKQAVFELSF 604 (1146)
T ss_pred ccccc-ccc-----cccccCCCCceEEEEECCCcCcc-------cCHHHHHHHHHHHHH
Confidence 21111 000 0011122 234999999999872 345566666665443
No 18
>cd07986 LPLAT_ACT14924-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown ACT14924. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are uncharacterized phospholipid/glycerol acyltransferases such as the Pectobacterium carotovorum subsp. carotovorum PC1 locus ACT14924 putative acyltransferase, and similar proteins.
Probab=99.79 E-value=3.5e-19 Score=174.52 Aligned_cols=174 Identities=16% Similarity=0.196 Sum_probs=117.1
Q ss_pred cCe--EEEEeccCCCCccccCcccccCCCceEEEecCCC-CCcHHHHHHhh---cCceeEEeee-hhhhhhhhhcCceeE
Q 042170 321 SGL--RFTVITKPKTSRSFQNSRDCQKTERTLYVCNHRT-LLDPLYLSFAL---KKNLTAVTYS-LSRMSEILAPIKTVR 393 (543)
Q Consensus 321 ~Gv--rv~v~G~~~~~~~~~~~~~~~~~~~~l~VaNH~S-~LD~~vl~a~l---~~~~~~va~s-l~~v~~~l~~i~tv~ 393 (543)
+++ +++|+|.++.| .++|+|+||||.| ++|++++.+++ +.++.+++++ +.++ .++.++ .++
T Consensus 4 ~~~~~~v~v~G~e~lp----------~~g~~iiv~NH~s~~~D~~~l~~~~~~~~~~~~~lak~~l~~~-p~l~~~-~i~ 71 (210)
T cd07986 4 LNVQLEVDVSGLENIP----------KDGPVVIVANHPFGILDGLILADLLGSVRPDVRILANQLLSKI-PELRDL-FIP 71 (210)
T ss_pred cceEEEEecCchhcCC----------CCCCEEEEEcCCccchHHHHHHHHHHHhCCCeEEEeHHhhhhC-cchHhh-EEe
Confidence 445 78889999886 2579999999986 69999998665 4567788763 2222 233333 578
Q ss_pred eecCch--------HHHHHHHHHHhCCC-eEEecCccccCCCc------ccccchhhhhcC----CceEEEEEEeccccc
Q 042170 394 MTRNRD--------QDAKLVKSLLNQGD-LVICPEGTTCREPY------LLRFSPLFAEMS----DNIIPVASNSHVTMF 454 (543)
Q Consensus 394 v~R~r~--------~~~~~~~~~L~~G~-l~iFPEGTtt~g~~------Ll~F~~~fa~l~----~pV~PVaI~~~~~~~ 454 (543)
|+|... +..++..+.|++|. ++||||||+++... +.+|+++++.++ .||+||+|.+....+
T Consensus 72 v~r~~~~~~~~~~~~~~~~~~~~L~~G~~l~IFPEGtrs~~~~~~g~~~~~~fk~G~~~lA~~~~~pIvPv~i~g~~~~~ 151 (210)
T cd07986 72 VDPLEGRAALAKNRESLREALRHLKNGGALIIFPAGRVSTASPPFGRVSDRPWNPFVARLARKAKAPVVPVYFSGRNSRL 151 (210)
T ss_pred ccCCCCcchhhhhHHHHHHHHHHHhCCCEEEEECCcccccccccCCccccCCccHHHHHHHHHHCCCEEEEEEeeeCcHH
Confidence 877422 22455677899996 99999999998643 689999888765 499999999865322
Q ss_pred -cccccCCcccccc---hhc-ccCCCCeEEEEEcccccCCcccCCCCCCHHHHHHHHHHH
Q 042170 455 -YGTTAGGLKCLDP---FFF-LMNPSPGYTMQLLEGVSGLSMCQDGNESRFDVANYVQSE 509 (543)
Q Consensus 455 -~gt~~~~~~~~d~---~~~-l~~P~~~v~V~fL~pi~~~~~~~~~~~~~~elA~~vq~~ 509 (543)
+... .-|.-++. .+. +..++..++|+|++||++++.. +.++.+|+++.+|+.
T Consensus 152 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~v~~g~pI~~~~~~--~~~~~~~l~~~~~~~ 208 (210)
T cd07986 152 FYLAG-LIHPTLRTLLLPRELLNKRGKTIRIRVGRPIPPEELA--RFEDAEELADFLRLH 208 (210)
T ss_pred HHHHH-ccCHHHHHHHHHHHHHHhCCCEEEEEeCCcCCHHHHh--cCCCHHHHHHHHHHh
Confidence 1000 00100000 011 1224455999999999985431 256899999999973
No 19
>COG0204 PlsC 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism]
Probab=99.79 E-value=1.5e-18 Score=172.18 Aligned_cols=152 Identities=28% Similarity=0.338 Sum_probs=115.1
Q ss_pred HhHHHHHHHcCeEEEEeccCCCCccccCcccccCCCceEEEecCCCCCcHHHHHHhhcCc--eeEEeee-hhh---hhhh
Q 042170 312 EISTPTLIFSGLRFTVITKPKTSRSFQNSRDCQKTERTLYVCNHRTLLDPLYLSFALKKN--LTAVTYS-LSR---MSEI 385 (543)
Q Consensus 312 ~~~~~ll~~~Gvrv~v~G~~~~~~~~~~~~~~~~~~~~l~VaNH~S~LD~~vl~a~l~~~--~~~va~s-l~~---v~~~ 385 (543)
.+...++..++.+++|+|.++.| .++++|+||||+||+|++++.++++.+ ++|++|. +.+ ++.+
T Consensus 39 ~~~~~~~~~~~~r~~v~G~e~lp----------~~~~~ivvaNH~S~~D~~~l~~~~~~~~~~~f~~k~~l~~~p~~g~~ 108 (255)
T COG0204 39 FLVLLLLLLFGLRVEVEGLENLP----------KGGPALVVANHQSFLDPLLLSLALPRRGPVRFVAKKELFKVPLLGWL 108 (255)
T ss_pred HHHHHHHHHhCceEEEEeeecCC----------CCCCEEEEECchhhhhHHHHhhhcCCCcceEEEeehhhccCchHHHH
Confidence 34566778999999999999987 248999999999999999999999887 8899874 333 3445
Q ss_pred hhcCceeEeecCchHH---HHHHHHHHhCCC-eEEecCccccCC-CcccccchhhhhcC----CceEEEEEEeccccccc
Q 042170 386 LAPIKTVRMTRNRDQD---AKLVKSLLNQGD-LVICPEGTTCRE-PYLLRFSPLFAEMS----DNIIPVASNSHVTMFYG 456 (543)
Q Consensus 386 l~~i~tv~v~R~r~~~---~~~~~~~L~~G~-l~iFPEGTtt~g-~~Ll~F~~~fa~l~----~pV~PVaI~~~~~~~~g 456 (543)
+...++++++|++..+ .+.++...++|. +++|||||++++ ..+.+|+.+++.++ .||+||++.|....+..
T Consensus 109 ~~~~~~i~v~r~~~~~~~~~~~~~~~~~~g~~l~iFPEGtr~~~~~~~~~~k~g~~~~a~~~~~PivPv~i~g~~~~~~~ 188 (255)
T COG0204 109 LRLLGAIPVDRENPDDETLRAAVARLKAGGRSLVIFPEGTRSRGGEELLPFKRGAARLALEAGVPIVPVAIVGAEELFPS 188 (255)
T ss_pred HHHcCeeEecCCCCcHHHHHHHHHHHHhCCcEEEECCCcCcCCCccccCCCcchHHHHHHHcCCCEEeEEEeCCcccccC
Confidence 5667999999965432 234444455566 999999999997 56999998776544 49999999998654420
Q ss_pred cccCCcccccchhcccCCCCeEEEEEcccccCC
Q 042170 457 TTAGGLKCLDPFFFLMNPSPGYTMQLLEGVSGL 489 (543)
Q Consensus 457 t~~~~~~~~d~~~~l~~P~~~v~V~fL~pi~~~ 489 (543)
.. +. .+.+++++|+..+
T Consensus 189 ----~~-----------~~-~~~~~~~~pi~~~ 205 (255)
T COG0204 189 ----LK-----------KG-KVKVRIGPPIDIS 205 (255)
T ss_pred ----CC-----------ce-eEEEEecCCcCcc
Confidence 00 11 1899999999874
No 20
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=99.78 E-value=3.6e-18 Score=194.78 Aligned_cols=176 Identities=21% Similarity=0.205 Sum_probs=126.0
Q ss_pred eEEEEeccCCCCccccCcccccCCCceEEEecCCCCCcHHHHHHhhcCceeEEeee-hhh---hhhhhhcCceeEeecCc
Q 042170 323 LRFTVITKPKTSRSFQNSRDCQKTERTLYVCNHRTLLDPLYLSFALKKNLTAVTYS-LSR---MSEILAPIKTVRMTRNR 398 (543)
Q Consensus 323 vrv~v~G~~~~~~~~~~~~~~~~~~~~l~VaNH~S~LD~~vl~a~l~~~~~~va~s-l~~---v~~~l~~i~tv~v~R~r 398 (543)
++++|.|.++.| .++|+|+||||+||+|++++.+++|++..|++|. +.+ +..++...+.++|+|++
T Consensus 14 ~~~~v~g~~~~~----------~~~~~i~v~NH~s~~D~~~l~~~~~~~~~~~~k~~l~~~~~~~~~~~~~~~i~v~r~~ 83 (718)
T PRK08043 14 YRVRVTGDTQAL----------KGERVLITPNHVSFLDGILLALFLPVRPVFAVYTSISQQWYMRWLKPYIDFVPLDPTK 83 (718)
T ss_pred EEEEEEccccCC----------CCCCEEEEECCCchHHHHHHHHhCCCCeEEEEeHHHhhhHHHHHHHHhCCEEEecCCC
Confidence 366678888765 2579999999999999999999998777788763 222 23334456899999976
Q ss_pred hHHHHHHHHHHhCCC-eEEecCccccCCCcccccchhhhhcC----CceEEEEEEeccccccccccCCcccccchhcccC
Q 042170 399 DQDAKLVKSLLNQGD-LVICPEGTTCREPYLLRFSPLFAEMS----DNIIPVASNSHVTMFYGTTAGGLKCLDPFFFLMN 473 (543)
Q Consensus 399 ~~~~~~~~~~L~~G~-l~iFPEGTtt~g~~Ll~F~~~fa~l~----~pV~PVaI~~~~~~~~gt~~~~~~~~d~~~~l~~ 473 (543)
....+++.+.|++|. |+||||||++++..+.+|+++++.++ .||+||+|.+........ .+ ..+... .
T Consensus 84 ~~~~~~~~~~l~~g~~~~iFPEGtr~~~~~~~~~k~G~~~~a~~~~~pivPv~i~g~~~~~~~~----~~--~~~~~~-~ 156 (718)
T PRK08043 84 PMAIKHLVRLVEQGRPVVIFPEGRITVTGSLMKIYDGAGFVAAKSGATVIPVRIEGAELTHFSR----LK--GLVKRR-L 156 (718)
T ss_pred HHHHHHHHHHHhCCCEEEEeCCCccCCCCCccCcchHHHHHHHHCCCCEEEEEEECCccCcccc----cC--Cccccc-c
Confidence 666778888899996 99999999999999999999876654 499999999864311100 00 000011 1
Q ss_pred CCCeEEEEEcccccCCcccC-CCCCCHHHHHHHHHHHHHHHhCC
Q 042170 474 PSPGYTMQLLEGVSGLSMCQ-DGNESRFDVANYVQSELGKALGF 516 (543)
Q Consensus 474 P~~~v~V~fL~pi~~~~~~~-~~~~~~~elA~~vq~~Ia~~Lg~ 516 (543)
.+.+.|+|++|++...... .+.++++.+.+.+++.|.+++..
T Consensus 157 -~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (718)
T PRK08043 157 -FPQITLHILPPTQLPMPDAPRARDRRKLAGEMLHQIMMEARMA 199 (718)
T ss_pred -CCceEEEecCcccCCCCCCccHHHHHHHHHHHHHHHHHHHHhh
Confidence 2358999999965422111 01245677899999999998876
No 21
>cd07993 LPLAT_DHAPAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as dihydroxyacetone phosphate acyltransferase (DHAPAT, also known as 1 glycerol-3-phosphate O-acyltransferase 1) and similar proteins.
Probab=99.75 E-value=2.8e-18 Score=167.53 Aligned_cols=142 Identities=22% Similarity=0.188 Sum_probs=98.5
Q ss_pred CCceEEEecCCCCCcHHHHHHhhc---CceeEEeee-h---hhhhhhhhcCceeEeecCchHH-------HHHHHHHHhC
Q 042170 346 TERTLYVCNHRTLLDPLYLSFALK---KNLTAVTYS-L---SRMSEILAPIKTVRMTRNRDQD-------AKLVKSLLNQ 411 (543)
Q Consensus 346 ~~~~l~VaNH~S~LD~~vl~a~l~---~~~~~va~s-l---~~v~~~l~~i~tv~v~R~r~~~-------~~~~~~~L~~ 411 (543)
++|+|+||||+||+|++++..+++ .+++++++. . ..++.++..+|+++|+|++..+ .+.+++.|++
T Consensus 21 ~~~~i~v~NH~S~lD~~~l~~~~~~~~~~~~~va~~e~~~~~~~g~~l~~~g~i~I~R~~~~~~~~~~~~~~~~~~~l~~ 100 (205)
T cd07993 21 GHPVVLLPTHRSYLDFLLLSFILFSLGLPLPHIAAGENLNIPILGTLLRRLGAFFIRRSFGKDPLYRAVLQEYVQELLKN 100 (205)
T ss_pred CCCEEEEecCcchhHHHHHHHHHHHCCCCCcEEEEchhhCcHHHHHHHHHCCCEEEecCCCccHHHHHHHHHHHHHHHhC
Confidence 379999999999999999998863 366777643 2 2234455667999999964211 2345678999
Q ss_pred CC-eEEecCccccCCCcccccchhhhhc-----------CCceEEEEEEecccccccccc----CC--ccc---ccchh-
Q 042170 412 GD-LVICPEGTTCREPYLLRFSPLFAEM-----------SDNIIPVASNSHVTMFYGTTA----GG--LKC---LDPFF- 469 (543)
Q Consensus 412 G~-l~iFPEGTtt~g~~Ll~F~~~fa~l-----------~~pV~PVaI~~~~~~~~gt~~----~~--~~~---~d~~~- 469 (543)
|. ++||||||+++++.+++|+.+++.+ ..+||||+|.|.... .+... .| .+. .+..|
T Consensus 101 g~~l~iFPEGtrs~~g~~~~~k~G~~~~a~~~~~~~~~~~v~IvPV~i~Y~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~ 179 (205)
T cd07993 101 GQPLEFFIEGTRSRTGKLLPPKLGLLSVVVEAYLKGSVPDVLIVPVSISYDRVL-EEELYAEELLGPPKPKESLSGLLGA 179 (205)
T ss_pred CceEEEEcCCCCCCCCCccchHHHHHHHHHHHHhhCCCCCeEEEEeEEeeCccc-chHHHHHHHcCCCCCCccHHHHHHH
Confidence 96 9999999999999999999876643 239999999997631 00000 01 000 01112
Q ss_pred --cccCCCCeEEEEEcccccC
Q 042170 470 --FLMNPSPGYTMQLLEGVSG 488 (543)
Q Consensus 470 --~l~~P~~~v~V~fL~pi~~ 488 (543)
.+..+...++|+|++|++.
T Consensus 180 ~~~l~~~~g~v~v~~~~Pi~~ 200 (205)
T cd07993 180 SKILRENFGRIRVDFGEPISL 200 (205)
T ss_pred HHHhhccCCeEEEECCCCcCH
Confidence 1445666799999999976
No 22
>cd07987 LPLAT_MGAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this suubgroup are such LPLATs as 2-acylglycerol O-acyltransferase (MGAT), and similar proteins.
Probab=99.73 E-value=2.1e-17 Score=161.61 Aligned_cols=175 Identities=19% Similarity=0.155 Sum_probs=118.4
Q ss_pred EE-EEeccCCCCccccCcccccCCCceEEEecCCCCC-cHHHHHHh-----hcCceeEEeee-hh---hhhhhhhcCcee
Q 042170 324 RF-TVITKPKTSRSFQNSRDCQKTERTLYVCNHRTLL-DPLYLSFA-----LKKNLTAVTYS-LS---RMSEILAPIKTV 392 (543)
Q Consensus 324 rv-~v~G~~~~~~~~~~~~~~~~~~~~l~VaNH~S~L-D~~vl~a~-----l~~~~~~va~s-l~---~v~~~l~~i~tv 392 (543)
++ +|+|.++.| +++++|+||||.|++ |+++++++ .++++.+++++ +. .++.++..+|.+
T Consensus 6 ~~~~v~g~e~lp----------~~~~~i~v~NH~s~~~D~~~l~~~~~~~~~~~~~~~la~~~~~~~p~~~~~~~~~g~i 75 (212)
T cd07987 6 RVYEVRGLENIP----------DEGPALLVHPHGGLPIDGALLAAAFLLLFPGRLPRALADHFLFPLPGLRDLLRRLGAV 75 (212)
T ss_pred eeEEEeccccCC----------CCCcEEEEECCcchhHHHHHHHHHHHHhCCCCeeEEeecccceeCccHHHHHHHcCCc
Confidence 55 889999887 257999999999999 99999987 34667787642 22 235567778888
Q ss_pred EeecCchHHHHHHHHHHhCCC-eEEecCccccCC-------CcccccchhhhhcC----CceEEEEEEecccccccccc-
Q 042170 393 RMTRNRDQDAKLVKSLLNQGD-LVICPEGTTCRE-------PYLLRFSPLFAEMS----DNIIPVASNSHVTMFYGTTA- 459 (543)
Q Consensus 393 ~v~R~r~~~~~~~~~~L~~G~-l~iFPEGTtt~g-------~~Ll~F~~~fa~l~----~pV~PVaI~~~~~~~~gt~~- 459 (543)
.++|+ +..+.|++|. |+||||||++.. ..+++|+++|+.++ .||+||++.+....+.....
T Consensus 76 ~~~r~------~~~~~L~~G~~l~ifPeGtr~~~~~~~~~~~~~~~~~~G~~~lA~~~~~pIvPv~~~G~~~~~~~~~~~ 149 (212)
T cd07987 76 PGSRE------NCVRLLREGELVLIFPGGAREALKSKREEYYLLWKKRKGFARLALRAGAPIVPVFTFGEEELFRVLGDP 149 (212)
T ss_pred ccCHH------HHHHHhcCCCEEEEEcCCHHHHhccCCCeEEEEECCCcCHHHHHHHcCCCeEeEEEeCcHHHHhhhccC
Confidence 88653 3567888996 999999999632 23889999887665 49999999987765531110
Q ss_pred CCcccccchhcccCCCC-eEEEEEcccccCCcc--cCCCCCCHHHHHHHHHHHHHHHh
Q 042170 460 GGLKCLDPFFFLMNPSP-GYTMQLLEGVSGLSM--CQDGNESRFDVANYVQSELGKAL 514 (543)
Q Consensus 460 ~~~~~~d~~~~l~~P~~-~v~V~fL~pi~~~~~--~~~~~~~~~elA~~vq~~Ia~~L 514 (543)
.++......+.+..|++ .++|.|++||..... ...+.++.+++.++++++|.+.+
T Consensus 150 ~~~~~~~~~~~l~~p~~~~i~v~~G~Pi~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 207 (212)
T cd07987 150 DGPVGKRLFRLLPLPRRLPLYPVFGEPIVVPRPPIPDPPDEDVEELHQKYIAALRELI 207 (212)
T ss_pred CCCceeehhceeccCCCCcceEEeCCCccCCCCCCCCcCHHHHHHHHHHHHHHHHHHH
Confidence 00000111223445664 599999999987431 00122455667777777776653
No 23
>cd06551 LPLAT Lysophospholipid acyltransferases (LPLATs) of glycerophospholipid biosynthesis. Lysophospholipid acyltransferase (LPLAT) superfamily members are acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis. These proteins catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this superfamily are LPLATs such as glycerol-3-phosphate 1-acyltransferase (GPAT, PlsB), 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), lysophosphatidylcholine acyltransferase 1 (LPCAT-1), lysophosphatidylethanolamine acyltransferase (LPEAT, also known as, MBOAT2, membrane-bound O-acyltransferase domain-containing protein 2), lipid A biosynthesis lauroyl/myristoyl acyltransferase, 2-acylglycerol O-acyltransferase (MGAT), dihydroxyacetone phosphate acyltransferase (DHAPAT, also known as 1 glycerol-3-p
Probab=99.72 E-value=9.7e-17 Score=152.45 Aligned_cols=162 Identities=23% Similarity=0.324 Sum_probs=125.2
Q ss_pred HcCeEEEEeccCCCCccccCcccccCCCceEEEecCCCCCcHHHHHHhh----cCceeEEeeehhh-hhhhhhcCceeEe
Q 042170 320 FSGLRFTVITKPKTSRSFQNSRDCQKTERTLYVCNHRTLLDPLYLSFAL----KKNLTAVTYSLSR-MSEILAPIKTVRM 394 (543)
Q Consensus 320 ~~Gvrv~v~G~~~~~~~~~~~~~~~~~~~~l~VaNH~S~LD~~vl~a~l----~~~~~~va~sl~~-v~~~l~~i~tv~v 394 (543)
+.+++++++|.++.| +++|+|++|||.|++|.+++...+ +.++.+++..... +..++.++|.+++
T Consensus 9 ~~~~~~~~~g~~~~p----------~~~~~i~v~nH~s~~D~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~g~~~i 78 (187)
T cd06551 9 FGFVRLEVKGPPPPP----------GGGPVLFVSNHSSWWDGLILFLLLERGLRRDVYGLMDEELLERYPFFTRLGAFSV 78 (187)
T ss_pred cceEEEEEeccccCC----------CCCCEEEEEcchhhHHHHHHHHHHHhccCCCeEEEEcHhhhhhChHHhhcCeEEe
Confidence 368899999999876 357999999999999999999987 3677777754332 4467777899999
Q ss_pred ecCc----hHHHHHHHHHHhC-CC-eEEecCccccCCC-cccccchhhhhcC----CceEEEEEEeccccccccccCCcc
Q 042170 395 TRNR----DQDAKLVKSLLNQ-GD-LVICPEGTTCREP-YLLRFSPLFAEMS----DNIIPVASNSHVTMFYGTTAGGLK 463 (543)
Q Consensus 395 ~R~r----~~~~~~~~~~L~~-G~-l~iFPEGTtt~g~-~Ll~F~~~fa~l~----~pV~PVaI~~~~~~~~gt~~~~~~ 463 (543)
+|++ .+..+.+.+.|++ |. +++|||||++++. .+.+|+++++.++ .+|+||+|.+....+
T Consensus 79 ~r~~~~~~~~~~~~~~~~l~~~g~~v~ifPeG~~~~~~~~~~~~~~g~~~la~~~~~~IvPv~i~~~~~~~--------- 149 (187)
T cd06551 79 DRDSPRSAAKSLKYVARLLSKPGSVVWIFPEGTRTRRDKRPLQFKPGVAHLAEKAGVPIVPVALRYTFELF--------- 149 (187)
T ss_pred cCCChhhHHHHHHHHHHHHhcCCcEEEEeCCcccCCCCCCcccccchHHHHHHHcCCcEEEEEEecccccc---------
Confidence 9853 3456778889999 76 8999999999887 8889999887765 499999999865321
Q ss_pred cccchhcccCCCCeEEEEEcccccCCcccCCCCCCHHHHHHHHHHHHHHHh
Q 042170 464 CLDPFFFLMNPSPGYTMQLLEGVSGLSMCQDGNESRFDVANYVQSELGKAL 514 (543)
Q Consensus 464 ~~d~~~~l~~P~~~v~V~fL~pi~~~~~~~~~~~~~~elA~~vq~~Ia~~L 514 (543)
.+...++|+|++||..+. ..+.++++++..+.|.+.+
T Consensus 150 ---------~~~~~~~i~~~~pi~~~~-----~~~~~~~~~~~~~~~~~~~ 186 (187)
T cd06551 150 ---------EQFPEIFVRIGPPIPYAE-----TALGEELAAELANRLTRLL 186 (187)
T ss_pred ---------CCCCcEEEEECCCccccc-----cccHHHHHHHHHHHHHHhc
Confidence 234469999999999843 3456677777666666543
No 24
>PLN02783 diacylglycerol O-acyltransferase
Probab=99.71 E-value=5.9e-17 Score=168.20 Aligned_cols=161 Identities=15% Similarity=0.157 Sum_probs=110.9
Q ss_pred hHHHHHHHcCeEEEEeccCCCCccccCcccccCCCceEEEecCCCCCcHHHHHH-----hhc-CceeEEeee-h---hhh
Q 042170 313 ISTPTLIFSGLRFTVITKPKTSRSFQNSRDCQKTERTLYVCNHRTLLDPLYLSF-----ALK-KNLTAVTYS-L---SRM 382 (543)
Q Consensus 313 ~~~~ll~~~Gvrv~v~G~~~~~~~~~~~~~~~~~~~~l~VaNH~S~LD~~vl~a-----~l~-~~~~~va~s-l---~~v 382 (543)
|.+..+..+|++++|+|.++.+ +++++|+++||.|.+|+.++.. .+| +++++++++ + ..+
T Consensus 77 i~~~~~~~~~~~v~v~g~e~l~----------~~~~~I~~~nH~S~ldi~~~~~~~~~~~~p~~~~~~lak~~lf~iP~~ 146 (315)
T PLN02783 77 ICKYACAYFPVRLHVEDEEAFD----------PNRAYVFGYEPHSVLPIGVIALADLSGFLPLPKIRALASSAVFYTPFL 146 (315)
T ss_pred HHHHHHHhcCeEEEEEchhhCC----------CCCCEEEEECCCcchhhHHHhhhhhhhccCCCchHHHhhhhhccCcHH
Confidence 3455556899999999998875 3679999999999999987432 355 577787764 2 334
Q ss_pred hhhhhcCceeEeecCchHHHHHHHHHHhCCC-eEEecCcccc-----CCC--cccccchhhhhcC----CceEEEEEEec
Q 042170 383 SEILAPIKTVRMTRNRDQDAKLVKSLLNQGD-LVICPEGTTC-----REP--YLLRFSPLFAEMS----DNIIPVASNSH 450 (543)
Q Consensus 383 ~~~l~~i~tv~v~R~r~~~~~~~~~~L~~G~-l~iFPEGTtt-----~g~--~Ll~F~~~fa~l~----~pV~PVaI~~~ 450 (543)
+.++.++|.++++|+ .+.+.|++|. ++||||||+. +++ .+++|+.+|+.++ .||+||++.+.
T Consensus 147 g~~~~~~G~ipv~R~------~~~~~Lk~G~sv~IfPeGtre~~~~~~~~~~~~~~~k~G~~~lA~~~g~PIVPv~i~G~ 220 (315)
T PLN02783 147 RHIWTWLGLDPASRK------NFTSLLKAGYSCIIVPGGVQECLYMEHGSEVAYLKSRKGFVKIAMETGAPLVPVFCFGQ 220 (315)
T ss_pred HHHHHHcCCeEEcHH------HHHHHHhCCCEEEEEcCCchhhcccCCCccccccCCCCcHHHHHHHcCCCEEEEEEECc
Confidence 566778899999875 2456788995 9999999973 333 3568999888765 49999999986
Q ss_pred cccccccccCCccc---------ccc--hh---cccCCCC-eEEEEEcccccCCc
Q 042170 451 VTMFYGTTAGGLKC---------LDP--FF---FLMNPSP-GYTMQLLEGVSGLS 490 (543)
Q Consensus 451 ~~~~~gt~~~~~~~---------~d~--~~---~l~~P~~-~v~V~fL~pi~~~~ 490 (543)
...+.--. .+.++ +.+ +| .+-.|++ .++|.+++||+.+.
T Consensus 221 ~~~~~~~~-~~~~~~~~l~r~~~~~p~~~wg~~~~piP~~~~i~vvvG~PI~v~~ 274 (315)
T PLN02783 221 TRAYKWWK-PGGPLVPKLSRAIGFTPIVFWGRYGSPIPHRTPMHVVVGKPIEVKK 274 (315)
T ss_pred hhhhhhhc-CCccHHHHHHHhcCcCceeeecccCcccCCCceEEEEecCCccCCC
Confidence 55432100 01000 011 12 1123553 59999999998753
No 25
>PRK14014 putative acyltransferase; Provisional
Probab=99.66 E-value=4.3e-15 Score=153.49 Aligned_cols=123 Identities=19% Similarity=0.186 Sum_probs=87.4
Q ss_pred HHcCeEEEEeccCCCCccccCcccccCCCceEEEecCCCCCcHHHHHHhhcCc---eeEEeee-hhhhh---hhhhcCce
Q 042170 319 IFSGLRFTVITKPKTSRSFQNSRDCQKTERTLYVCNHRTLLDPLYLSFALKKN---LTAVTYS-LSRMS---EILAPIKT 391 (543)
Q Consensus 319 ~~~Gvrv~v~G~~~~~~~~~~~~~~~~~~~~l~VaNH~S~LD~~vl~a~l~~~---~~~va~s-l~~v~---~~l~~i~t 391 (543)
.+.|++++|.|.++.+ .++++|+||||+||+|++++.+++++. ..|++|+ +.+++ ..+..++.
T Consensus 69 ~~~g~k~~V~G~e~l~----------~~~~~IiisNHqS~~D~l~l~~~~~~~~~~~kfv~K~eL~~iP~~G~~~~~~~~ 138 (301)
T PRK14014 69 LLPRTQWDVEGLEGLS----------KKGWYLVISNHQSWVDILVLQYVFNRRIPMLKFFLKQELIWVPFLGLAWWALDF 138 (301)
T ss_pred HhCCcEEEEEcCCCCC----------CCCCEEEEECCCcHHHHHHHHHHHhhccCceEEEehHHhhhcccHHHHHHHcCC
Confidence 3889999999999865 257999999999999999999998764 4577763 44432 22334589
Q ss_pred eEeecCch-----------HHHHHHHHH---HhC-CC-eEEecCccccC-C---------CcccccchhhhhcC------
Q 042170 392 VRMTRNRD-----------QDAKLVKSL---LNQ-GD-LVICPEGTTCR-E---------PYLLRFSPLFAEMS------ 439 (543)
Q Consensus 392 v~v~R~r~-----------~~~~~~~~~---L~~-G~-l~iFPEGTtt~-g---------~~Ll~F~~~fa~l~------ 439 (543)
+|++|+.+ +|.+++++. +++ |. +++|||||++. + ..|++|+++.+.++
T Consensus 139 ifi~R~~~~~~~~~p~~~~~d~~~~~~a~~~~~~~~~~l~IFPEGTR~t~~k~~~~~~~~~~lL~pk~ggf~~a~~~~~~ 218 (301)
T PRK14014 139 PFMKRYSKAYLAKNPELKGKDLETTRRACEKFKRMPTTIVNFVEGTRFTPEKHQQQQSPYQHLLKPKAGGIAFALNAMGE 218 (301)
T ss_pred eEEeccchhhhhhchhhhhhHHHHHHHHHHHHhcCCcEEEEeccceecCcccccccCCCcccccCCCCccHHHHHHhhhc
Confidence 99999532 223333333 333 53 89999999953 2 27999987433221
Q ss_pred --CceEEEEEEecc
Q 042170 440 --DNIIPVASNSHV 451 (543)
Q Consensus 440 --~pV~PVaI~~~~ 451 (543)
.+|+||+|.|..
T Consensus 219 ~~~~I~dvti~y~~ 232 (301)
T PRK14014 219 QFDGLLDVTIVYPD 232 (301)
T ss_pred cCCEEEEEEEEeCC
Confidence 489999999975
No 26
>TIGR00530 AGP_acyltrn 1-acyl-sn-glycerol-3-phosphate acyltransferases. 1-acyl-sn-glycerol-3-phosphate acyltransferase is also called 1-AGP acyltransferase, lysophosphatidic acid acyltransferase, and LPA acyltransferase.
Probab=99.65 E-value=6.3e-16 Score=138.18 Aligned_cols=116 Identities=27% Similarity=0.351 Sum_probs=93.7
Q ss_pred CeEEEEeccCCCCccccCcccccCCCceEEEecCCCCCcHHHHHHhhcCceeEEeee-h---hhhhhhhhcCceeEeecC
Q 042170 322 GLRFTVITKPKTSRSFQNSRDCQKTERTLYVCNHRTLLDPLYLSFALKKNLTAVTYS-L---SRMSEILAPIKTVRMTRN 397 (543)
Q Consensus 322 Gvrv~v~G~~~~~~~~~~~~~~~~~~~~l~VaNH~S~LD~~vl~a~l~~~~~~va~s-l---~~v~~~l~~i~tv~v~R~ 397 (543)
|++++++|.++.| +++|+|++|||.|++|.+++...+++++.++++. + ..+..++..+|.++|+|+
T Consensus 1 ~~~~~v~g~~~lp----------~~~~~i~v~nH~s~~D~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~i~r~ 70 (130)
T TIGR00530 1 GLKVEVVGPENLP----------AKSPVLVVANHQSNLDPLTLSAAFPPPIVFIAKKELKWIPFFGIMLWLTGAIFIDRE 70 (130)
T ss_pred CcEEEEECcccCC----------CCCCEEEEECCCchhHHHHHHHHcCCCcEEEEhHHhhhCCHHHHHHHHcCCEEecCC
Confidence 7899999999876 2579999999999999999999988788888863 1 223455666799999885
Q ss_pred chHH----HHHHHHHHhCCC-eEEecCccccCCCcccccchhhhhcC----CceEEEEE
Q 042170 398 RDQD----AKLVKSLLNQGD-LVICPEGTTCREPYLLRFSPLFAEMS----DNIIPVAS 447 (543)
Q Consensus 398 r~~~----~~~~~~~L~~G~-l~iFPEGTtt~g~~Ll~F~~~fa~l~----~pV~PVaI 447 (543)
..++ .+++.+.|++|. +++||||+++++..+.+|+.+++.++ .||+||.+
T Consensus 71 ~~~~~~~~~~~~~~~l~~g~~v~ifPeG~~~~~~~~~~f~~g~~~la~~~~~pvvpv~~ 129 (130)
T TIGR00530 71 NIRAIATALKAAIEVLKQGRSIGVFPEGTRSRGRDILPFKKGAFHIAIKAGVPILPVVL 129 (130)
T ss_pred ChHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCCCCCCCcchhHHHHHHHcCCCEEeEEe
Confidence 4222 466778899996 99999999999889999998776653 59999987
No 27
>PF01553 Acyltransferase: Acyltransferase; InterPro: IPR002123 This family contains acyltransferases involved in phospholipid biosynthesis and other proteins of unknown function []. This domain is found in tafazzins, defects in which are the cause of Barth syndrome; a severe inherited disorder which is often fatal in childhood and is characterised by cardiac and skeletal abnormalities. Phospholipid/glycerol acyltransferase is not found in the viruses or the archaea and is under represented in the bacteria. Bacterial glycerol-phosphate acyltransferases are involved in membrane biogenesis since they use fatty acid chains to form the first membrane phospholipids [].; GO: 0016746 transferase activity, transferring acyl groups, 0008152 metabolic process; PDB: 1IUQ_A 1K30_A.
Probab=99.63 E-value=8.9e-17 Score=144.04 Aligned_cols=115 Identities=29% Similarity=0.384 Sum_probs=59.0
Q ss_pred EEEEeccCCCCccccCcccccCCCceEEEecCCCCCcHHHHHHhh----cCceeEEeee-hhh---hhhhhhcCceeEee
Q 042170 324 RFTVITKPKTSRSFQNSRDCQKTERTLYVCNHRTLLDPLYLSFAL----KKNLTAVTYS-LSR---MSEILAPIKTVRMT 395 (543)
Q Consensus 324 rv~v~G~~~~~~~~~~~~~~~~~~~~l~VaNH~S~LD~~vl~a~l----~~~~~~va~s-l~~---v~~~l~~i~tv~v~ 395 (543)
+|+|+|.++.| +++|+|++|||.|++|.+++..++ +....+++.. +.+ +..++..+|.++++
T Consensus 1 ~v~v~g~e~l~----------~~~~~i~v~NH~s~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~i~ 70 (132)
T PF01553_consen 1 KVEVEGLENLP----------KGGGVIFVSNHQSWLDGFALMALLQRSGPRRPRFVAKDELFKIPFLGWFLRRLGFIPID 70 (132)
T ss_dssp -----HHHHHH----------TT-EEEEEE----TTHHHHHHHHHTTT-HHH-EEEEECHHHH-TTTHHHHHEEEEE--C
T ss_pred CCccCccccCC----------CCCCEEEEecCCCCCcchheeehhhhhccccceeEeeeccccchhhhhhhhhccceeee
Confidence 46788888876 258999999999999999999998 3445666643 222 45566778999999
Q ss_pred c-CchH---HHHHHHHHHhCCC-eEEecCccccCCCcccccchhhhhc----CCceEEEEEE
Q 042170 396 R-NRDQ---DAKLVKSLLNQGD-LVICPEGTTCREPYLLRFSPLFAEM----SDNIIPVASN 448 (543)
Q Consensus 396 R-~r~~---~~~~~~~~L~~G~-l~iFPEGTtt~g~~Ll~F~~~fa~l----~~pV~PVaI~ 448 (543)
| ++.+ ..+.+++.|++|. +++|||||++++..+++|+++++.+ ..+|+||+|.
T Consensus 71 r~~~~~~~~~~~~~~~~l~~~~~i~ifPEG~~~~~~~~~~~~~G~~~~a~~~~~~ivPv~i~ 132 (132)
T PF01553_consen 71 RSNRKKNRKALKDIKEILRKGGSIVIFPEGTRSRSGELLPFKKGAFHIALKAKVPIVPVAIS 132 (132)
T ss_dssp CHHHHHHHHHHHHHHHHHHC---EEE-TT-S---B--B----HHHHHHHHHH----------
T ss_pred eecccccchhHHHHHHHhhhcceeeecCCccCcCCCccCCccHHHHHHHHHcCCccccccCC
Confidence 8 3322 3466678899986 9999999999999889999988776 4599999984
No 28
>PRK03355 glycerol-3-phosphate acyltransferase; Validated
Probab=99.63 E-value=1e-15 Score=173.73 Aligned_cols=186 Identities=17% Similarity=0.122 Sum_probs=118.5
Q ss_pred CeEEEEeccCCCCccccCcccccCCCceEEEecCCCCCcHHHHHHhhcC---c-eeEEeee---hhhhhhhhhcCceeEe
Q 042170 322 GLRFTVITKPKTSRSFQNSRDCQKTERTLYVCNHRTLLDPLYLSFALKK---N-LTAVTYS---LSRMSEILAPIKTVRM 394 (543)
Q Consensus 322 Gvrv~v~G~~~~~~~~~~~~~~~~~~~~l~VaNH~S~LD~~vl~a~l~~---~-~~~va~s---l~~v~~~l~~i~tv~v 394 (543)
++.|.+.+-+.... ...++|+|||+||+|++|++++..++.+ + ..++++. ++-++.++...|++||
T Consensus 249 ~v~v~~~~~~~lr~-------~~~~~~vV~vpNHrS~lD~lll~~~l~~~gl~~~~i~Ag~~L~~~~lG~llr~~Ga~fI 321 (783)
T PRK03355 249 EIDYDEYELAALRA-------LLEEHPAVLLFSHRSYIDGLVVPVAMQENRLPPVHVFGGINLSFGPMGPIMRRSGMIFI 321 (783)
T ss_pred cceeCHHHHHHHHh-------ccCCCCEEEEECCCcchHHHHHHHHHhhcCCCCcEEEeHHHhccHHHHHHHHHcCcEEe
Confidence 66676666444321 1135799999999999999999998863 3 4455542 3335566777899999
Q ss_pred ecCchHH---HHH----HHHHHhCC-CeEEecCccccCCCcccccchhhhh-----------cCCceEEEEEEecccccc
Q 042170 395 TRNRDQD---AKL----VKSLLNQG-DLVICPEGTTCREPYLLRFSPLFAE-----------MSDNIIPVASNSHVTMFY 455 (543)
Q Consensus 395 ~R~r~~~---~~~----~~~~L~~G-~l~iFPEGTtt~g~~Ll~F~~~fa~-----------l~~pV~PVaI~~~~~~~~ 455 (543)
+|+...+ .+. +...+++| .+.+|||||+|+++.+++||.+... ...+|+||+|.|.+.+=.
T Consensus 322 rR~~~~~~ly~~vl~eyi~~Ll~~G~~v~iFpEGTRSrtGkLl~pK~Gll~~~~~a~~~~~~~~v~IVPV~I~Yd~v~E~ 401 (783)
T PRK03355 322 RRNIGDDPLYKYVLREYVGYLVEKRFNLSWYIEGTRSRTGKLLPPKLGLLSYVADAYLDGRSDDVLLQPVSISFDQLHEI 401 (783)
T ss_pred cCCCCchHHHHHHHHHHHHHHHhCCCeEEEEecCCCCCCCCCCcccccHHHHHHHHHHhcccCCCEEEEEEEEecccccc
Confidence 9953222 122 33445678 4999999999999999999986531 124999999999774321
Q ss_pred ccc---cCC-cccccchhccc-------CC-CCeEEEEEcccccCCcccCCCC--------CC---HHHHHHHHHHHHHH
Q 042170 456 GTT---AGG-LKCLDPFFFLM-------NP-SPGYTMQLLEGVSGLSMCQDGN--------ES---RFDVANYVQSELGK 512 (543)
Q Consensus 456 gt~---~~~-~~~~d~~~~l~-------~P-~~~v~V~fL~pi~~~~~~~~~~--------~~---~~elA~~vq~~Ia~ 512 (543)
++. ..| .|.-.+++.++ .+ +..+.|+|++|++.++...... ++ -+++++++...|.+
T Consensus 402 ~~y~~e~~G~~k~~esl~~~~~~~~~l~~~~~G~i~V~fGePisl~~~~~~~~~~~~~~~~~~~~~~~~la~~Vm~~In~ 481 (783)
T PRK03355 402 GEYAAEARGGEKTPEGLRWLYNYIKAQGERNYGKIYVRFGEPVSMRQYLGAPHGPLTQDPDAKRLALQKMAFEVAWRINQ 481 (783)
T ss_pred hhHHHHhcCCCcccccHHHHHHHHHHhccCCceeEEEEECCCCCHHHhhccccccccccchhhHHHHHHHHHHHHHHHHh
Confidence 211 112 23223333222 23 3569999999999865421110 12 34477777777776
Q ss_pred Hh
Q 042170 513 AL 514 (543)
Q Consensus 513 ~L 514 (543)
..
T Consensus 482 ~~ 483 (783)
T PRK03355 482 VT 483 (783)
T ss_pred cC
Confidence 53
No 29
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=99.56 E-value=3.1e-14 Score=135.27 Aligned_cols=107 Identities=23% Similarity=0.347 Sum_probs=82.8
Q ss_pred HHhcCcccchhH-HHHh-----hchhhHHHhcCHHHHHHHH---hCC-cEEEEeCCcHHHHHHHHHhhCCCcE--EEece
Q 042170 122 VSFFWVKKDNFR-VGRA-----VLPKFFLENVGLEIFEVLK---KGG-KTVAVSNMPQVMIDSFLRDYLDIDL--VVGRE 189 (543)
Q Consensus 122 ~~f~G~~~~~~~-va~a-----vlpk~~~e~l~~ea~~~~~---~~g-~~v~VSAsp~~~vepfak~~lG~d~--VlgTe 189 (543)
..+.+++.+.++ +++. +.|.++ +++.+.++ +.| ++++||++|+.+++++++. +|++. |+||+
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~-~~i~~~~v~~~~ 137 (192)
T PF12710_consen 64 ERLRGLSERYLEEIAKDIEQYKLFPGFI-----PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAER-LGIDDDNVIGNE 137 (192)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHHCTTCH-----TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHH-TTSSEGGEEEEE
T ss_pred HHHHHHHHHHHHHHHHhhcccccCcCch-----hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHH-cCCCceEEEEEe
Confidence 456677777777 6663 234442 66667664 566 9999999999999999985 99998 99999
Q ss_pred EEEeC-eEEeeeeccCCCcHHHHHHHHHH-------hcCCceEEEeCCCCCcchhcc
Q 042170 190 LKVFC-GYFVGLMEDKKKNILVLQEIIKQ-------ENSGDVIGISSLNSSLDHYKL 238 (543)
Q Consensus 190 lev~~-G~~TG~~~g~~~g~~Kv~~l~~~-------~~~~~~~aygD~~S~~D~~~m 238 (543)
++..+ +..+|++.+.+|+ +|+++++++ .+....++||| |.+|.| |
T Consensus 138 ~~~~~~~~~~~~~~~~~~~-~K~~~l~~~~~~~~~~~~~~~~~~iGD--s~~D~~-~ 190 (192)
T PF12710_consen 138 LFDNGGGIFTGRITGSNCG-GKAEALKELYIRDEEDIDPDRVIAIGD--SINDLP-M 190 (192)
T ss_dssp EECTTCCEEEEEEEEEEES-HHHHHHHHHHHHHHHTHTCCEEEEEES--SGGGHH-H
T ss_pred eeecccceeeeeECCCCCC-cHHHHHHHHHHHhhcCCCCCeEEEEEC--CHHHHH-H
Confidence 93333 6788999888778 999999998 12236789999 999999 8
No 30
>cd07985 LPLAT_GPAT Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT. Lysophospholipid acyltransferase (LPLAT) superfamily member: glycerol-3-phosphate 1-acyltransferase (GPAT, PlsB). LPLATs are acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. This subgroup includes glycerol-3-phosphate 1-acyltransferase (GPAT, PlsB).
Probab=99.55 E-value=3.4e-14 Score=140.65 Aligned_cols=162 Identities=17% Similarity=0.188 Sum_probs=106.3
Q ss_pred CCceEEEecCCCCCcHHHHHHhhcCceeEEeeehhh-----------hhhhhhcCceeEeecCc-------------hHH
Q 042170 346 TERTLYVCNHRTLLDPLYLSFALKKNLTAVTYSLSR-----------MSEILAPIKTVRMTRNR-------------DQD 401 (543)
Q Consensus 346 ~~~~l~VaNH~S~LD~~vl~a~l~~~~~~va~sl~~-----------v~~~l~~i~tv~v~R~r-------------~~~ 401 (543)
.+++|++|||+|++|+++|..+++++++++++..-. +..++...+.+.|.|+. +.+
T Consensus 21 ~~~vIl~sNH~S~~Dp~ii~~~~~r~~~~lAk~~lf~ag~~~~~~pl~~~f~~~~~~~pV~r~k~~~~~P~~~~~k~~~~ 100 (235)
T cd07985 21 GHNVVLLANHQTEADPAVISLLLEKTHPYLAENMIYVAGDRVVSDPLCKPFSMGRNLLCVHSKKHIDDPPELKEEKMKAN 100 (235)
T ss_pred CCCEEEEECCcccccHHHHHHHhccccHHHhhhhheeccccccccHhHHHHHhhCCceeeecCcccccchhhhhhhhhcc
Confidence 579999999999999999999999888888753221 23344566899998864 234
Q ss_pred H---HHHHHHHhCCC--eEEecCccccCC---Ccc--cccch----hhhh----cCCc--eEEEEEEeccccccccccC-
Q 042170 402 A---KLVKSLLNQGD--LVICPEGTTCRE---PYL--LRFSP----LFAE----MSDN--IIPVASNSHVTMFYGTTAG- 460 (543)
Q Consensus 402 ~---~~~~~~L~~G~--l~iFPEGTtt~g---~~L--l~F~~----~fa~----l~~p--V~PVaI~~~~~~~~gt~~~- 460 (543)
. +.+.+.|++|. +.||||||+++- ..+ .+|++ ++.. ...| |+|+||....-+-++.++-
T Consensus 101 ~~alk~~~~lLk~G~~~i~IfPEGtR~r~~~~g~~~p~~Fd~~~~~~~~~La~~s~~p~hi~Plai~~ydi~Ppp~~v~~ 180 (235)
T cd07985 101 LATLKEMQQLLNEGGQLIWVAPSGGRDRPDANGEWYPDPFDPSAVEMMRLLAQKSRVPTHLYPMALLTYDIMPPPKQVEK 180 (235)
T ss_pred HHHHHHHHHHHHcCCeEEEEcCCCCCCCCCCCCCccCCccchHHHHHHHHHHHhcCCCceEEeeEEEeecccCCCccccc
Confidence 4 44456789985 579999999962 233 34752 2222 2347 9999999433222222210
Q ss_pred --CcccccchhcccCCCCeEEEEEcccccCCccc---CCCCCCHHHHHHHHHHHHHHHh
Q 042170 461 --GLKCLDPFFFLMNPSPGYTMQLLEGVSGLSMC---QDGNESRFDVANYVQSELGKAL 514 (543)
Q Consensus 461 --~~~~~d~~~~l~~P~~~v~V~fL~pi~~~~~~---~~~~~~~~elA~~vq~~Ia~~L 514 (543)
|-+ ..+++ ..+.|.+++||..+..+ .+..++++++++.+.+.|.+..
T Consensus 181 ~ige~------r~~~f-~~v~i~vg~~i~~~~~~~~~~d~~e~~~~~~~~i~~~v~~~y 232 (235)
T cd07985 181 EIGEK------RAVAF-TGVGLAVGEEIDFSAIAATHKDPEEVREAFSKAAFDSVKRLY 232 (235)
T ss_pred ccccc------ccccc-cceEEEecCCccchhhhcccCCcHHHHHHHHHHHHHHHHHHH
Confidence 000 01222 34999999999986431 1123567889999998887764
No 31
>cd07983 LPLAT_DUF374-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: DUF374. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are the uncharacterized DUF374 phospholipid/glycerol acyltransferases and similar proteins.
Probab=99.55 E-value=4.1e-14 Score=135.81 Aligned_cols=171 Identities=18% Similarity=0.206 Sum_probs=111.4
Q ss_pred HcCeEEEEeccCCCCccccCcccccCCCceEEEecCCCCCcHHHHHHhhcCceeEEeeehhh---hhhhhhcCceeEeec
Q 042170 320 FSGLRFTVITKPKTSRSFQNSRDCQKTERTLYVCNHRTLLDPLYLSFALKKNLTAVTYSLSR---MSEILAPIKTVRMTR 396 (543)
Q Consensus 320 ~~Gvrv~v~G~~~~~~~~~~~~~~~~~~~~l~VaNH~S~LD~~vl~a~l~~~~~~va~sl~~---v~~~l~~i~tv~v~R 396 (543)
.++.++++.|.++.+.. ...++|+|++|||.|.+|++++... +.++.++++.... +..++...|.+.|+|
T Consensus 5 ~~~~~~~v~g~e~l~~~------~~~~~~~I~~~~H~s~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~g~~~i~r 77 (189)
T cd07983 5 YLTLRWRVIGDESADAL------IAQGEPVILAFWHGRLLLMPYLFRR-RKRIAALISRSKDGEIIARVLERLGIRVVRG 77 (189)
T ss_pred eEeEeEEEeCchhhhhh------ccCCCCEEEEEeCchHHHhHHHhcc-CCCeEEEEecCcCHHHHHHHHHHhCCCEEEc
Confidence 56789999998886410 0125799999999999999998765 6777777754222 334455668888987
Q ss_pred Cc----hHHHHHHHHHHhCCC-eEEecCccccCCCcccccchhhhhcC----CceEEEEEEeccccccccccCCcccccc
Q 042170 397 NR----DQDAKLVKSLLNQGD-LVICPEGTTCREPYLLRFSPLFAEMS----DNIIPVASNSHVTMFYGTTAGGLKCLDP 467 (543)
Q Consensus 397 ~r----~~~~~~~~~~L~~G~-l~iFPEGTtt~g~~Ll~F~~~fa~l~----~pV~PVaI~~~~~~~~gt~~~~~~~~d~ 467 (543)
++ .+..+++.+.|++|. +++|||||++. ..+|+++++.++ .||+||++.+...... .+|. .
T Consensus 78 ~~~~~~~~~~~~~~~~lk~g~~v~ifpeG~r~~---~~~~~~G~~~lA~~~~~pIvPv~i~~~~~~~~----~~~~---~ 147 (189)
T cd07983 78 SSSRGGAAALREMLRALKDGYNIAITPDGPRGP---RYKVKPGVILLARKSGAPIVPVAIAASRAWRL----KSWD---R 147 (189)
T ss_pred CCCCcHHHHHHHHHHHHhCCCEEEEcCCCCCCc---ceecchHHHHHHHHhCCCEEEEEEEEEccEec----cCcc---c
Confidence 32 234567778899996 89999998753 357888776654 4999999987543111 1110 0
Q ss_pred hhcccCCCCeEEEEEcccccCCcccCCCCCCHHHHHHHHHHHHHHHh
Q 042170 468 FFFLMNPSPGYTMQLLEGVSGLSMCQDGNESRFDVANYVQSELGKAL 514 (543)
Q Consensus 468 ~~~l~~P~~~v~V~fL~pi~~~~~~~~~~~~~~elA~~vq~~Ia~~L 514 (543)
. .+-.|...++|.|++|++++. ..+ ++..+++.+.+.++|
T Consensus 148 ~-~~p~~~~~~~v~~~~pi~~~~-----~~~-~~~~~~~~~~~~~~~ 187 (189)
T cd07983 148 F-IIPKPFSRVVIVFGEPIHVPP-----DAD-EEELEEYRLELEAAL 187 (189)
T ss_pred c-ccCCCCcceEEEEeCCEeeCC-----CCC-HHHHHHHHHHHHHHh
Confidence 0 011233459999999998732 223 444444444444443
No 32
>cd07989 LPLAT_AGPAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), Tafazzin (product of Barth syndrome gene), and similar proteins.
Probab=99.55 E-value=2.8e-14 Score=135.39 Aligned_cols=162 Identities=22% Similarity=0.268 Sum_probs=118.3
Q ss_pred cCeEEEEeccCCCCccccCcccccCCCceEEEecCCCCCcHHHHHHhhcCceeEEeeeh----hhhhhhhhcCceeEeec
Q 042170 321 SGLRFTVITKPKTSRSFQNSRDCQKTERTLYVCNHRTLLDPLYLSFALKKNLTAVTYSL----SRMSEILAPIKTVRMTR 396 (543)
Q Consensus 321 ~Gvrv~v~G~~~~~~~~~~~~~~~~~~~~l~VaNH~S~LD~~vl~a~l~~~~~~va~sl----~~v~~~l~~i~tv~v~R 396 (543)
++.++++.|.+..+ +++|+|++|||.|++|++++....+.+..++.+.. ..+..++...|.++++|
T Consensus 8 ~~~~v~v~~~~~~~----------~~~~~i~~~nH~~~~D~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~g~~~v~~ 77 (184)
T cd07989 8 LGVRVRVEGLENLP----------PKGPVIIVANHQSYLDPLVLGAALPRPIRFVAKKELFKIPFLGWLLRLLGAIPIDR 77 (184)
T ss_pred eceEEEEEccccCC----------CCCCEEEEECCcchHHHHHHHhhccCceEEEEhHHhhhCchHHHHHHHCCeEEEec
Confidence 67889999988753 35799999999999999988887656677776533 22344556678899987
Q ss_pred Cc----hHHHHHHHHHHhCCC-eEEecCccccCCCcccccchhhhhcC----CceEEEEEEeccccccccccCCcccccc
Q 042170 397 NR----DQDAKLVKSLLNQGD-LVICPEGTTCREPYLLRFSPLFAEMS----DNIIPVASNSHVTMFYGTTAGGLKCLDP 467 (543)
Q Consensus 397 ~r----~~~~~~~~~~L~~G~-l~iFPEGTtt~g~~Ll~F~~~fa~l~----~pV~PVaI~~~~~~~~gt~~~~~~~~d~ 467 (543)
.. .+..+++.+.+++|. +++||||+.+++....+|+.+++.++ .+|+||.+.+....+. +
T Consensus 78 ~~~~~~~~~~~~~~~~l~~g~~l~i~peg~~~~~~~~~~~~~g~~~lA~~~~~~Vvpv~~~~~~~~~~------~----- 146 (184)
T cd07989 78 GNGRSAREALREAIEALKEGESVVIFPEGTRSRDGELLPFKSGAFRLAKEAGVPIVPVAISGTWGSLP------K----- 146 (184)
T ss_pred CCchhHHHHHHHHHHHHHCCCEEEEecCcccCCCCCcCCCcccHHHHHHHcCCCEEeEEEeChhhhCc------C-----
Confidence 43 445677888899997 89999999999888999988766543 4999999998654331 0
Q ss_pred hhcccCCCCeEEEEEcccccCCcccCCCCCCHHHHHHH
Q 042170 468 FFFLMNPSPGYTMQLLEGVSGLSMCQDGNESRFDVANY 505 (543)
Q Consensus 468 ~~~l~~P~~~v~V~fL~pi~~~~~~~~~~~~~~elA~~ 505 (543)
+.+..+++.++|+|++||..+.. +...+++.++.++
T Consensus 147 -~~~~~~~~~~~i~~~~pi~~~~~-~~~~~~~~~~~~~ 182 (184)
T cd07989 147 -GKKLPRPGRVTVRIGEPIPPEGL-ELAEEDRKELREK 182 (184)
T ss_pred -CCCcCCCCcEEEEEcCCcChhhh-ccchHHHHHHHHh
Confidence 03445677799999999998542 1123445555443
No 33
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=99.52 E-value=5.1e-14 Score=132.39 Aligned_cols=163 Identities=18% Similarity=0.212 Sum_probs=103.0
Q ss_pred EEEEEcCCccccCCCchHHHHHHHHhhcchHHHHHHHHHHHHHHhcccchhHHHHHHHHhcCcccchhHHHHhhchhhHH
Q 042170 65 TLIFNVEGFLLKSSSLFPYFMLVAFEAGGLIRAFLLFILYPLICLAGEEMGLKIMVMVSFFWVKKDNFRVGRAVLPKFFL 144 (543)
Q Consensus 65 ~a~FD~DGTLl~~~s~fp~f~~~a~~~~~~~r~~~ll~~~p~~~~l~~~~~~k~~~~~~f~G~~~~~~~va~avlpk~~~ 144 (543)
+++||||||||..+|.+.+ +............+.. .|+... +.-....+ ..+..+.|...++ ++++ ++.
T Consensus 1 l~~fD~DgTl~~~~s~~~~-~~~~~~~~~~~~~~~~--~~~~g~-i~~~~~~~-~~~~~~~~~~~~~--~~~~----~~~ 69 (177)
T TIGR01488 1 LAIFDFDGTLTRQDSLIDL-LAKLLGTNDEVIELTR--LAPSGR-ISFEDALG-RRLALLHRSRSEE--VAKE----FLA 69 (177)
T ss_pred CEEecCccccccchhhHHH-HHHHhCChHHHHHHHH--HHHCCC-CCHHHHHH-HHHHHhCCCCHHH--HHHH----HHH
Confidence 3799999999999887765 3222221122222111 111100 11111121 1222344555332 3332 222
Q ss_pred Hh--cCHHHHHHHH---hCC-cEEEEeCCcHHHHHHHHHhhCCCcEEEeceEEEe-CeEEeeeecc-CCC-cHHHHHHHH
Q 042170 145 EN--VGLEIFEVLK---KGG-KTVAVSNMPQVMIDSFLRDYLDIDLVVGRELKVF-CGYFVGLMED-KKK-NILVLQEII 215 (543)
Q Consensus 145 e~--l~~ea~~~~~---~~g-~~v~VSAsp~~~vepfak~~lG~d~VlgTelev~-~G~~TG~~~g-~~~-g~~Kv~~l~ 215 (543)
+. ++|.+.+.++ +.| ++++||++++.+++++++. +|++.++++++++. +|.+||...+ .++ +..|.+.++
T Consensus 70 ~~~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~-~g~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~ 148 (177)
T TIGR01488 70 RQVALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEK-LGIDDVFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLK 148 (177)
T ss_pred hcCCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHH-cCCchheeeeEEECCCCEEeCccCCcccCCcchHHHHHH
Confidence 22 3455555444 667 8889999999999999986 89999999999995 8999999877 455 788999888
Q ss_pred HHhcC---C--ceEEEeCCCCCcchhccccccc
Q 042170 216 KQENS---G--DVIGISSLNSSLDHYKLFLQQC 243 (543)
Q Consensus 216 ~~~~~---~--~~~aygD~~S~~D~~~m~L~~~ 243 (543)
++... . ..++||| |.+|.+ | ++.|
T Consensus 149 ~~~~~~~~~~~~~~~iGD--s~~D~~-~-~~~a 177 (177)
T TIGR01488 149 ELLEESKITLKKIIAVGD--SVNDLP-M-LKLA 177 (177)
T ss_pred HHHHHhCCCHHHEEEEeC--CHHHHH-H-HhcC
Confidence 87543 1 4689999 999999 8 5654
No 34
>TIGR03703 plsB glycerol-3-phosphate O-acyltransferase. Members of this protein family are PlsB, glycerol-3-phosphate O-acyltransferase, present in E. coli and numerous related species. In many bacteria, PlsB is not found, and appears to be replaced by a two enzyme system for 1-acyl-glycerol-3-phosphate biosynthesis, the PlsX/Y system.
Probab=99.52 E-value=6.8e-14 Score=160.04 Aligned_cols=160 Identities=19% Similarity=0.190 Sum_probs=104.7
Q ss_pred EEEEeccCCCCccccCcccccCCCceEEEecCCCCCcHHHHHHhhcCc---eeEEee----ehhhhhhhhhcCceeEeec
Q 042170 324 RFTVITKPKTSRSFQNSRDCQKTERTLYVCNHRTLLDPLYLSFALKKN---LTAVTY----SLSRMSEILAPIKTVRMTR 396 (543)
Q Consensus 324 rv~v~G~~~~~~~~~~~~~~~~~~~~l~VaNH~S~LD~~vl~a~l~~~---~~~va~----sl~~v~~~l~~i~tv~v~R 396 (543)
.++|.|.++.+.. .+++.|+|||+||+|++|+++++.++.+. .++++. .++.++.++...|.+||+|
T Consensus 275 ~v~V~g~E~l~~~------~~~~~pvI~vpNHrS~lD~llL~~~l~~~~l~~p~iaag~nL~~p~~g~llr~~GaffIrR 348 (799)
T TIGR03703 275 GINVNNADRVRKL------AQKGHEIIYVPCHRSHMDYLLLSYVLYHEGLVPPHIAAGINLNFWPAGPIFRRGGAFFIRR 348 (799)
T ss_pred ceEEechhhcccc------cCCCCcEEEEECCCCchHHHHHHHHHhhcCCCCceEEechhhccHHHHHHHHHCCceEeec
Confidence 3667788876510 01234999999999999999999887544 233332 1334456677789999999
Q ss_pred CchHH-------HHHHHHHHhCCC-eEEecCccccCCCcccccchhhhhcC-----------CceEEEEEEecccc----
Q 042170 397 NRDQD-------AKLVKSLLNQGD-LVICPEGTTCREPYLLRFSPLFAEMS-----------DNIIPVASNSHVTM---- 453 (543)
Q Consensus 397 ~r~~~-------~~~~~~~L~~G~-l~iFPEGTtt~g~~Ll~F~~~fa~l~-----------~pV~PVaI~~~~~~---- 453 (543)
+.+.+ .+.+.+.+++|. +.+|||||+|+++.+++||.+++.++ .+|+||+|.|.+-+
T Consensus 349 ~~~~~~ly~~vl~eyi~~ll~~G~~v~iFpEGtRSrtGkll~pK~G~l~~a~~a~~~~~~~~v~IVPVsI~Yekv~E~~~ 428 (799)
T TIGR03703 349 SFKGNKLYSAVFREYLHELFAKGYSVEYFVEGGRSRTGRLLPPKTGMLAMTLQAMLRGIRRPITLVPVYIGYEHVMEVAT 428 (799)
T ss_pred CCCcchhHHHHHHHHHHHHHhCCCEEEEEcCCCcCCCCCccchHHHHHHHHHHHhhccCCCCcEEEEEEEecccccchhH
Confidence 53221 133456788995 99999999999999999998764432 38999999996521
Q ss_pred ccccccCCcccccchhc-------ccCCCCeEEEEEcccccCCc
Q 042170 454 FYGTTAGGLKCLDPFFF-------LMNPSPGYTMQLLEGVSGLS 490 (543)
Q Consensus 454 ~~gt~~~~~~~~d~~~~-------l~~P~~~v~V~fL~pi~~~~ 490 (543)
+.....+..|--+.++. +.+ ...+.|+|++||+.++
T Consensus 429 y~~El~G~~K~kEsl~~~l~~~~~l~~-~G~i~V~FGePIsl~~ 471 (799)
T TIGR03703 429 YLKELRGKRKEKESVFGVLKTLRKLRN-FGQGYVNFGEPINLND 471 (799)
T ss_pred HHHHhcCCCccccCHHHHHHHHhccCC-CceEEEEeCCCccHHH
Confidence 11111111122222221 223 4569999999997643
No 35
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=99.51 E-value=1.2e-13 Score=135.15 Aligned_cols=165 Identities=15% Similarity=0.123 Sum_probs=112.8
Q ss_pred eEEEEEcCCccccCCCchHHHHHHHHhhcchHHHHHHHHHHHHHHhc-ccchhHHHHHHHHhcCcccchhH-HHHhhchh
Q 042170 64 RTLIFNVEGFLLKSSSLFPYFMLVAFEAGGLIRAFLLFILYPLICLA-GEEMGLKIMVMVSFFWVKKDNFR-VGRAVLPK 141 (543)
Q Consensus 64 ~~a~FD~DGTLl~~~s~fp~f~~~a~~~~~~~r~~~ll~~~p~~~~l-~~~~~~k~~~~~~f~G~~~~~~~-va~avlpk 141 (543)
.+|+||+||||+.. .|++|+ .+.| .. .... . . .... .+....+.+-+....|++.++++ +.+.+
T Consensus 2 ~la~FDlD~TLi~~--~w~~~~---~~~g-~~-~~~~-~-~--~~~~~~~~~~~~r~~ll~~~g~~~~~i~~~~~~i--- 67 (203)
T TIGR02137 2 EIACLDLEGVLVPE--IWIAFA---EKTG-ID-ALKA-T-T--RDIPDYDVLMKQRLRILDEHGLKLGDIQEVIATL--- 67 (203)
T ss_pred eEEEEeCCcccHHH--HHHHHH---HHcC-Cc-HHHH-H-h--cCCcCHHHHHHHHHHHHHHCCCCHHHHHHHHHhC---
Confidence 36999999999965 577654 2333 21 1000 0 0 0000 01111112222223599999997 54431
Q ss_pred hHHHhcCHHHHHHHH---hCCcEEEEeCCcHHHHHHHHHhhCCCcEEEeceEEEeC-eEEeeeeccCCCcHHHHHHHHHH
Q 042170 142 FFLENVGLEIFEVLK---KGGKTVAVSNMPQVMIDSFLRDYLDIDLVVGRELKVFC-GYFVGLMEDKKKNILVLQEIIKQ 217 (543)
Q Consensus 142 ~~~e~l~~ea~~~~~---~~g~~v~VSAsp~~~vepfak~~lG~d~VlgTelev~~-G~~TG~~~g~~~g~~Kv~~l~~~ 217 (543)
.+.|.+.+.++ +.+++++||++++.+++|++++ +|+|.++++++++.+ |.+||..... .+.|...++++
T Consensus 68 ----~l~pga~ell~~lk~~~~~~IVS~~~~~~~~~il~~-lgi~~~~an~l~~~~~g~~tG~~~~~--~~~K~~~l~~l 140 (203)
T TIGR02137 68 ----KPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQ-LGFPTLLCHKLEIDDSDRVVGYQLRQ--KDPKRQSVIAF 140 (203)
T ss_pred ----CCCccHHHHHHHHHhCCeEEEEeCChHHHHHHHHHH-cCCchhhceeeEEecCCeeECeeecC--cchHHHHHHHH
Confidence 25666666555 4569999999999999999986 999999999999988 9999976532 34577777766
Q ss_pred hcCC-ceEEEeCCCCCcchhcccccccCceeeccCCc
Q 042170 218 ENSG-DVIGISSLNSSLDHYKLFLQQCNEVYLVRSTD 253 (543)
Q Consensus 218 ~~~~-~~~aygD~~S~~D~~~m~L~~~~~~y~v~p~~ 253 (543)
.... ..++||| |.+|.+ | ++.|+.+.+.++.+
T Consensus 141 ~~~~~~~v~vGD--s~nDl~-m-l~~Ag~~ia~~ak~ 173 (203)
T TIGR02137 141 KSLYYRVIAAGD--SYNDTT-M-LSEAHAGILFHAPE 173 (203)
T ss_pred HhhCCCEEEEeC--CHHHHH-H-HHhCCCCEEecCCH
Confidence 3322 6889999 999999 9 89999999999744
No 36
>PRK04974 glycerol-3-phosphate acyltransferase; Validated
Probab=99.51 E-value=6.3e-14 Score=160.43 Aligned_cols=189 Identities=17% Similarity=0.169 Sum_probs=119.6
Q ss_pred EEEeccCCCCccccCcccccCCCceEEEecCCCCCcHHHHHHhhcCc---eeEEeee----hhhhhhhhhcCceeEeecC
Q 042170 325 FTVITKPKTSRSFQNSRDCQKTERTLYVCNHRTLLDPLYLSFALKKN---LTAVTYS----LSRMSEILAPIKTVRMTRN 397 (543)
Q Consensus 325 v~v~G~~~~~~~~~~~~~~~~~~~~l~VaNH~S~LD~~vl~a~l~~~---~~~va~s----l~~v~~~l~~i~tv~v~R~ 397 (543)
++|.|.++.+.. .+++.|+|||+||+|++|+++++.++.+. .++++.. ++.++.++...|.+||+|+
T Consensus 286 i~V~g~e~L~~~------~~~~~~vI~v~NHrS~lD~llL~~~l~~~gl~~p~iAagenl~~p~lg~llr~~GaffIrR~ 359 (818)
T PRK04974 286 INVHNAERVRQL------AQDGHEIVYVPCHRSHMDYLLLSYVLYHQGLVPPHIAAGINLNFWPAGPIFRRGGAFFIRRS 359 (818)
T ss_pred eEEcchhhhhhc------ccCCCCEEEEeCCCCchHHHHHHHHHhhcCCCCceEEehHHhcchHHHHHHHHCCceEeeCC
Confidence 566788876510 01245899999999999999999888554 5566642 3344566777899999996
Q ss_pred chHHH-------HHHHHHHhCCC-eEEecCccccCCCcccccchhhhhcC-----------CceEEEEEEecccc----c
Q 042170 398 RDQDA-------KLVKSLLNQGD-LVICPEGTTCREPYLLRFSPLFAEMS-----------DNIIPVASNSHVTM----F 454 (543)
Q Consensus 398 r~~~~-------~~~~~~L~~G~-l~iFPEGTtt~g~~Ll~F~~~fa~l~-----------~pV~PVaI~~~~~~----~ 454 (543)
.+.+. +.+.+.+++|. +.+|||||+++++.+++|+.+.+.++ .+|+||+|.|.+-+ +
T Consensus 360 ~~~~~ly~~vl~~yi~~ll~~G~~v~iFpEGtRSRtGkllppK~G~l~~a~~a~~~~~~~dv~IVPVsIsYekv~E~~~y 439 (818)
T PRK04974 360 FKGNKLYSTVFREYLGELFARGYSVEYFVEGGRSRTGRLLQPKTGMLAMTLQAMLRGSRRPITLVPVYIGYEHVMEVGTY 439 (818)
T ss_pred CCchHHHHHHHHHHHHHHHhCCCEEEEEcCCCcCCCCCCcchhhhHHHHHHHHhhcccCCCcEEEEEEEeccchhhhHHH
Confidence 42221 23456788895 99999999999999999998655332 27899999996511 1
Q ss_pred cccccCCcccccchhcc------cCCCCeEEEEEcccccCCcccCCC------------C-------CCHHHHHHHHHHH
Q 042170 455 YGTTAGGLKCLDPFFFL------MNPSPGYTMQLLEGVSGLSMCQDG------------N-------ESRFDVANYVQSE 509 (543)
Q Consensus 455 ~gt~~~~~~~~d~~~~l------~~P~~~v~V~fL~pi~~~~~~~~~------------~-------~~~~elA~~vq~~ 509 (543)
.....+..|--+.+|.+ ......++|+|++||+.++...++ . ..-.++|.+|...
T Consensus 440 ~~el~G~~K~kEsl~~il~~i~~~~~~G~v~V~FGePisl~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~La~~V~~~ 519 (818)
T PRK04974 440 AKELRGAPKEKESLFQVLRGIRKLRNFGQGYVNFGEPIPLNDYLNQHVPEWRESIDPIEEQRPAWLTPAVNNLANQVMVR 519 (818)
T ss_pred HHHhcCCCCcCcCHHHHHHHHhhcCCCceEEEEeCCCccHHHHhhhhchhhhhhcccccccCcHhHHHHHHHHHHHHHHH
Confidence 11111112222333321 123456999999999753311000 0 1124578888888
Q ss_pred HHHHhCCCcc
Q 042170 510 LGKALGFECT 519 (543)
Q Consensus 510 Ia~~Lg~~~T 519 (543)
|.++.-+..|
T Consensus 520 In~~~~v~p~ 529 (818)
T PRK04974 520 INNAAAANPV 529 (818)
T ss_pred HHhceecCHH
Confidence 7776544433
No 37
>PRK08238 hypothetical protein; Validated
Probab=99.50 E-value=1.5e-13 Score=150.09 Aligned_cols=162 Identities=14% Similarity=0.138 Sum_probs=112.0
Q ss_pred CeEEEEEcCCccccCCCchHHHHHHHHhhcchHHHHHHHHHHHHHHhcccchhHHHHHHHHhcCcccchhHHHHhhchhh
Q 042170 63 ERTLIFNVEGFLLKSSSLFPYFMLVAFEAGGLIRAFLLFILYPLICLAGEEMGLKIMVMVSFFWVKKDNFRVGRAVLPKF 142 (543)
Q Consensus 63 ~~~a~FD~DGTLl~~~s~fp~f~~~a~~~~~~~r~~~ll~~~p~~~~l~~~~~~k~~~~~~f~G~~~~~~~va~avlpk~ 142 (543)
+...+||+||||+++|+++..++..... ...+.+.+ |. +++.....+|+.+.. ..+++.+.+ |
T Consensus 10 ~~pl~~DlDgTLi~td~l~e~~~~~l~~--~p~~~~~l----~~-~~~~g~a~lK~~~a~-~~~~d~~~l-------p-- 72 (479)
T PRK08238 10 DLPLVVDLDGTLIRTDLLHESIFALLRR--NPLALLRL----PL-WLLRGKAALKRRLAR-RVDLDVATL-------P-- 72 (479)
T ss_pred CCCEEEeCCCCccccchHHHHHHHHHHh--ChHHHHHH----HH-HHHhcHHHHHHHHHh-hcCCChhhC-------C--
Confidence 4688999999999999998886654422 22222211 22 223334556654432 223333222 2
Q ss_pred HHHhcCHHHHHHHH---hCC-cEEEEeCCcHHHHHHHHHhhCC-CcEEEeceEEEeCeEEeeeeccCCC-cHHHHHHHHH
Q 042170 143 FLENVGLEIFEVLK---KGG-KTVAVSNMPQVMIDSFLRDYLD-IDLVVGRELKVFCGYFVGLMEDKKK-NILVLQEIIK 216 (543)
Q Consensus 143 ~~e~l~~ea~~~~~---~~g-~~v~VSAsp~~~vepfak~~lG-~d~VlgTelev~~G~~TG~~~g~~~-g~~Kv~~l~~ 216 (543)
++|++.+.++ ++| +++++|++++.++++++++ +| +|.|+|++- +.|| +++|++++++
T Consensus 73 ----~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~-lGlFd~Vigsd~------------~~~~kg~~K~~~l~~ 135 (479)
T PRK08238 73 ----YNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAH-LGLFDGVFASDG------------TTNLKGAAKAAALVE 135 (479)
T ss_pred ----CChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCCCCEEEeCCC------------ccccCCchHHHHHHH
Confidence 3455555444 677 7889999999999999885 89 599999973 2356 7789999999
Q ss_pred HhcCCceEEEeCCCCCcchhcccccccCceeeccCCc-------ccCCccccc
Q 042170 217 QENSGDVIGISSLNSSLDHYKLFLQQCNEVYLVRSTD-------KRSWQHLSR 262 (543)
Q Consensus 217 ~~~~~~~~aygD~~S~~D~~~m~L~~~~~~y~v~p~~-------~~~w~~l~~ 262 (543)
+++++....+|| |.+|.| + ++.|+++++|||+. +++|+.+-.
T Consensus 136 ~l~~~~~~yvGD--S~~Dlp-~-~~~A~~av~Vn~~~~l~~~a~~~~~~~~~~ 184 (479)
T PRK08238 136 AFGERGFDYAGN--SAADLP-V-WAAARRAIVVGASPGVARAARALGPVERVF 184 (479)
T ss_pred HhCccCeeEecC--CHHHHH-H-HHhCCCeEEECCCHHHHHHHHHcCCcceec
Confidence 887654456799 999999 9 79999999999944 367887733
No 38
>smart00563 PlsC Phosphate acyltransferases. Function in phospholipid biosynthesis and have either glycerolphosphate, 1-acylglycerolphosphate, or 2-acylglycerolphosphoethanolamine acyltransferase activities. Tafazzin, the product of the gene mutated in patients with Barth syndrome, is a member of this family.
Probab=99.43 E-value=5.2e-13 Score=116.36 Aligned_cols=101 Identities=32% Similarity=0.444 Sum_probs=78.6
Q ss_pred eEEEecCCCCCcHHHHHHhhcC---ceeEEeee----hhhhhhhhhcCceeEeecCch-HHHHH---HHHHHhCCC-eEE
Q 042170 349 TLYVCNHRTLLDPLYLSFALKK---NLTAVTYS----LSRMSEILAPIKTVRMTRNRD-QDAKL---VKSLLNQGD-LVI 416 (543)
Q Consensus 349 ~l~VaNH~S~LD~~vl~a~l~~---~~~~va~s----l~~v~~~l~~i~tv~v~R~r~-~~~~~---~~~~L~~G~-l~i 416 (543)
.|+||||.|++|.+++...++. +..++++. ...++.++..+|.++++|... .+.+. +.+.+++|. +++
T Consensus 1 ~i~v~NH~s~~D~~~l~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~i 80 (118)
T smart00563 1 ALVVANHQSFLDPLVLSALLPRKGGRVRFVAKKELFYVPLLGWLLRLLGAIFIDRENGRLARAALREAVRLLRDGGWLLI 80 (118)
T ss_pred CEEEECCCchHHHHHHHHHcccccCceEEEeHHHHhhccHHHHHHHHCCCeEEeCCCcHHHHHHHHHHHHHHhCCCEEEE
Confidence 4899999999999999999875 46677643 122344566779999998543 34433 345677776 899
Q ss_pred ecCccccCCCcccccchhhhhcC----CceEEEEEEe
Q 042170 417 CPEGTTCREPYLLRFSPLFAEMS----DNIIPVASNS 449 (543)
Q Consensus 417 FPEGTtt~g~~Ll~F~~~fa~l~----~pV~PVaI~~ 449 (543)
||||+++++..+.+|+++++.++ .+|+||+++|
T Consensus 81 fPeG~~~~~~~~~~~~~g~~~la~~~~~~v~Pv~~~~ 117 (118)
T smart00563 81 FPEGTRSRPGKLLPFKKGAARLALEAGVPIVPVAIRG 117 (118)
T ss_pred eCCcccCCCCCcCCCcccHHHHHHHcCCCEEeEEEec
Confidence 99999999989999999887765 5999999987
No 39
>cd07990 LPLAT_LCLAT1-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as Lysocardiolipin acyltransferase 1 (LCLAT1) or 1-acyl-sn-glycerol-3-phosphate acyltransferase and similar proteins.
Probab=99.39 E-value=6.6e-13 Score=128.26 Aligned_cols=102 Identities=27% Similarity=0.278 Sum_probs=73.0
Q ss_pred HcCeEEEEeccCCCCccccCcccccCCCceEEEecCCCCCcHHHHHHhhcC-----ceeEEeee-hhhh---hhhhhcCc
Q 042170 320 FSGLRFTVITKPKTSRSFQNSRDCQKTERTLYVCNHRTLLDPLYLSFALKK-----NLTAVTYS-LSRM---SEILAPIK 390 (543)
Q Consensus 320 ~~Gvrv~v~G~~~~~~~~~~~~~~~~~~~~l~VaNH~S~LD~~vl~a~l~~-----~~~~va~s-l~~v---~~~l~~i~ 390 (543)
++|++++|.|.++.+ .++++|+||||+|++|++++.+++.+ .+.++.|. +..+ ..++...+
T Consensus 7 ~~g~~i~v~G~~~~~----------~~~~~iiv~NH~s~~D~~~~~~~~~~~~~~~~~~~v~K~~l~~~p~~g~~~~~~~ 76 (193)
T cd07990 7 LSGVKVVVYGDEPKL----------PKERALIISNHRSEVDWLVLWMLADRFGRLGRLKIVLKDSLKYPPLGGWGWQLGE 76 (193)
T ss_pred ecCeEEEEEecCccC----------CCccEEEEEcCCcccCHHHHHHHHHHcCccceEEeeehhhhhcCChhhHHHhhCe
Confidence 479999999998763 25699999999999999999999854 46677753 3321 11223347
Q ss_pred eeEeecCchHHHHHHHHH---HhC---CC-eEEecCccccCCCccccc
Q 042170 391 TVRMTRNRDQDAKLVKSL---LNQ---GD-LVICPEGTTCREPYLLRF 431 (543)
Q Consensus 391 tv~v~R~r~~~~~~~~~~---L~~---G~-l~iFPEGTtt~g~~Ll~F 431 (543)
.++++|+..+|.+++++. +++ |. ++||||||+++.....++
T Consensus 77 ~i~v~R~~~~d~~~i~~~~~~l~~~~~~~~lviFPEGTr~~~~~~~~~ 124 (193)
T cd07990 77 FIFLKRKWEKDEKTIKRQLKRLKDSPEPFWLLIFPEGTRFTEEKKERS 124 (193)
T ss_pred eEEEECChHHhHHHHHHHHHHHhcCCCCcEEEEeCcccCCCHHHHHHH
Confidence 999999765566555544 333 54 999999999887655443
No 40
>PLN02510 probable 1-acyl-sn-glycerol-3-phosphate acyltransferase
Probab=99.34 E-value=1.8e-11 Score=129.88 Aligned_cols=117 Identities=23% Similarity=0.238 Sum_probs=81.3
Q ss_pred HcCeEEEEeccCCCCccccCcccccCCCceEEEecCCCCCcHHHHHHhhc-----CceeEEeee-hhhhh---hhhhcCc
Q 042170 320 FSGLRFTVITKPKTSRSFQNSRDCQKTERTLYVCNHRTLLDPLYLSFALK-----KNLTAVTYS-LSRMS---EILAPIK 390 (543)
Q Consensus 320 ~~Gvrv~v~G~~~~~~~~~~~~~~~~~~~~l~VaNH~S~LD~~vl~a~l~-----~~~~~va~s-l~~v~---~~l~~i~ 390 (543)
+.|++++|.|+. .+ .++++|++|||+|++|.+++.++.. ..+.+++|+ +.+++ ..+...|
T Consensus 76 ~~gvkv~v~Ge~-l~----------~~~~~IiiaNH~S~~D~l~l~~l~~r~~~~~~~kfv~K~eL~~iP~~Gw~~~~~g 144 (374)
T PLN02510 76 INKTKVVFSGDK-VP----------PEERVLLIANHRTEVDWMYLWDLALRKGCLGYIKYVLKSSLMKLPVFGWAFHIFE 144 (374)
T ss_pred hcCeEEEEEeec-CC----------CCCcEEEEECCCchHHHHHHHHHHHhcCCCcccEEEEeHHHhhchHHHHHHHHcC
Confidence 589999999944 32 2468999999999999999876532 246677763 44432 3344579
Q ss_pred eeEeecCchHH---HHHHHHHHhCC-C---eEEecCccccCCCcccccchhhhhcCCceEEEEE
Q 042170 391 TVRMTRNRDQD---AKLVKSLLNQG-D---LVICPEGTTCREPYLLRFSPLFAEMSDNIIPVAS 447 (543)
Q Consensus 391 tv~v~R~r~~~---~~~~~~~L~~G-~---l~iFPEGTtt~g~~Ll~F~~~fa~l~~pV~PVaI 447 (543)
.++++|+...| .+++.+.++++ + ++||||||++.......|+..+.+...||..-.+
T Consensus 145 ~I~v~R~~~~D~~~l~~~l~~lk~~~~~~~LvIFPEGTR~t~~~~~~s~~~A~k~glPil~~vL 208 (374)
T PLN02510 145 FIPVERKWEVDEPNIRQMLSSFKDPRDPLWLALFPEGTDYTEAKCQRSQKFAAEHGLPILNNVL 208 (374)
T ss_pred CeeeeCCccccHHHHHHHHHHHhccCCCcEEEEeCCcCCCCccccchHHHHHHHcCCCcceeEE
Confidence 99999975544 34444556654 2 8999999998766666666666666556655555
No 41
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=99.30 E-value=2.9e-11 Score=118.61 Aligned_cols=168 Identities=13% Similarity=0.076 Sum_probs=107.6
Q ss_pred EEEEcCCccccCCCchHHHHHHHHhhcchHHHHHHHHHHHHHHhcccchhHHHHHHHHhcCcccchhH-HHHhhchhhHH
Q 042170 66 LIFNVEGFLLKSSSLFPYFMLVAFEAGGLIRAFLLFILYPLICLAGEEMGLKIMVMVSFFWVKKDNFR-VGRAVLPKFFL 144 (543)
Q Consensus 66 a~FD~DGTLl~~~s~fp~f~~~a~~~~~~~r~~~ll~~~p~~~~l~~~~~~k~~~~~~f~G~~~~~~~-va~avlpk~~~ 144 (543)
++||||||||+.|+.+.. +. .+....+ ..+. . .+ ...+...++.+-..|.+++....+ +.+ ++.+ .
T Consensus 2 ~~fDFDgTit~~d~~~~~-~~-~~~~~~~-~~~~-----~-~~-~~g~~~~~e~~~~~~~~~~~~~~~~~~~-~~~~--~ 68 (214)
T TIGR03333 2 IICDFDGTITNNDNIISI-MK-QFAPPEW-EALK-----D-GV-LSKTLSIQEGVGRMFGLLPSSLKEEITS-FVLE--T 68 (214)
T ss_pred EEeccCCCCCcchhHHHH-HH-HhCcHHH-HHHH-----H-HH-HcCCccHHHHHHHHHhhCCCchHHHHHH-HHHh--c
Confidence 689999999999775542 21 1111011 1100 0 11 111222443333345566555444 322 1111 1
Q ss_pred HhcCHHHHHHHH---hCC-cEEEEeCCcHHHHHHHHHhhCCCcEEEeceEEEeCeEEeeeec-------cCCCcHHHHHH
Q 042170 145 ENVGLEIFEVLK---KGG-KTVAVSNMPQVMIDSFLRDYLDIDLVVGRELKVFCGYFVGLME-------DKKKNILVLQE 213 (543)
Q Consensus 145 e~l~~ea~~~~~---~~g-~~v~VSAsp~~~vepfak~~lG~d~VlgTelev~~G~~TG~~~-------g~~~g~~Kv~~ 213 (543)
-.++|.+.+.++ +.| .+++||++++.+++++++.+.+.+.+.|+++.+.++.+++... +.+||..|..+
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~~~ 148 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKPSL 148 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHHHH
Confidence 236675555444 667 8889999999999999987535678999999988888887764 34677789999
Q ss_pred HHHHhcCC-ceEEEeCCCCCcchhcccccccCceeecc
Q 042170 214 IIKQENSG-DVIGISSLNSSLDHYKLFLQQCNEVYLVR 250 (543)
Q Consensus 214 l~~~~~~~-~~~aygD~~S~~D~~~m~L~~~~~~y~v~ 250 (543)
++++.... ..+.+|| |.+|.+ + +..|+..++.+
T Consensus 149 l~~~~~~~~~~i~iGD--g~~D~~-~-a~~Ad~~~ar~ 182 (214)
T TIGR03333 149 IRKLSEPNDYHIVIGD--SVTDVE-A-AKQSDLCFARD 182 (214)
T ss_pred HHHHhhcCCcEEEEeC--CHHHHH-H-HHhCCeeEehH
Confidence 99876433 5689999 999999 9 78999877755
No 42
>PRK11915 glycerol-3-phosphate acyltransferase; Reviewed
Probab=99.30 E-value=4.5e-12 Score=140.50 Aligned_cols=175 Identities=13% Similarity=0.045 Sum_probs=115.6
Q ss_pred CCceEEEecCCCCCcHHHHHHhhcCc----eeEEe---eehhhhhhhhhcCceeEeecCchHH-------HHHHHHHHhC
Q 042170 346 TERTLYVCNHRTLLDPLYLSFALKKN----LTAVT---YSLSRMSEILAPIKTVRMTRNRDQD-------AKLVKSLLNQ 411 (543)
Q Consensus 346 ~~~~l~VaNH~S~LD~~vl~a~l~~~----~~~va---~sl~~v~~~l~~i~tv~v~R~r~~~-------~~~~~~~L~~ 411 (543)
+.|+|||+||+|++|.++++.+++.. ..+++ ...+.++.++...|.+|+.|.-+.+ .+-+...+++
T Consensus 114 ~~pvIfvp~HrS~lDylllsyvL~~~~l~~~~~~ag~nl~~~~lg~~lr~~GafFirRsf~~~~LY~~vl~eYi~~ll~~ 193 (621)
T PRK11915 114 KATLAFAFSHRSYLDGMLLPEVILANRLSPALTFGGANLNFFPMGAWAKRTGAIFIRRQTKDIPVYRFVLRAYAAQLVQN 193 (621)
T ss_pred CCCEEEEeccccccHHHHHHHHHHHcCCCCceeehhhhhcchhHHHHHHhCCcEEeccCCCCchHHHHHHHHHHHHHHhC
Confidence 57999999999999999999876422 12222 3455567788889999999843333 2566788899
Q ss_pred C-CeEEecCccccCCCcccccchhhhh-----------cCCceEEEEEEecccc----ccccccCCcccccchh------
Q 042170 412 G-DLVICPEGTTCREPYLLRFSPLFAE-----------MSDNIIPVASNSHVTM----FYGTTAGGLKCLDPFF------ 469 (543)
Q Consensus 412 G-~l~iFPEGTtt~g~~Ll~F~~~fa~-----------l~~pV~PVaI~~~~~~----~~gt~~~~~~~~d~~~------ 469 (543)
| ++.+|||||+|+.+.+++-+-+.-. ...+|+||+|.|.+-+ +...-.++.|--.+++
T Consensus 194 G~~le~F~EG~RSRtGkll~Pk~GlLs~vv~~~~~~~~~dV~iVPVsI~YDrV~E~~~y~~El~G~~K~~Esl~~l~~~~ 273 (621)
T PRK11915 194 HVNLTWSIEGGRTRTGKLRPPVFGILRYITDAVDEIDGPEVYLVPTSIVYDQLHEVEAMTTEAYGAVKRPEDLRFLVRLA 273 (621)
T ss_pred CCcEEEEeCCCCCCCCCCCCCchhhHHHHHHHHhcCCCCCeEEEEEEEeecccccHHHHHHHhcCCCCCccHHHHHHHHH
Confidence 9 5999999999999988885543222 1138999999998732 1111112222222222
Q ss_pred -cccCCCCeEEEEEcccccCCcccC-------CCCCCHHHHHHHHHHHHHHHhCCCccC
Q 042170 470 -FLMNPSPGYTMQLLEGVSGLSMCQ-------DGNESRFDVANYVQSELGKALGFECTK 520 (543)
Q Consensus 470 -~l~~P~~~v~V~fL~pi~~~~~~~-------~~~~~~~elA~~vq~~Ia~~Lg~~~T~ 520 (543)
.+.+....+.|+|++|++-.+.+. ..+...+.++.+|...|.+..-+..|+
T Consensus 274 ~~l~~~~G~i~V~FgePisL~~~l~~~~~~~~~~~~~v~~La~~V~~~In~~~~v~p~~ 332 (621)
T PRK11915 274 RQQGERLGRAYLDFGEPLPLRKRLQELRADKSGTGSEIERIALDVEHRINRATPVTPTA 332 (621)
T ss_pred HHHhhcCceEEEECCCCccHHHHHhhhccCcccchhHHHHHHHHHHHHHhhcccCCHHH
Confidence 133456679999999998644210 012346778888888887765444433
No 43
>PTZ00374 dihydroxyacetone phosphate acyltransferase; Provisional
Probab=99.29 E-value=1.3e-11 Score=140.93 Aligned_cols=145 Identities=17% Similarity=0.128 Sum_probs=98.1
Q ss_pred CCceEEEecCCCCCcHHHHHHhhc----CceeEEeee----hhhhhhhhhcCceeEeecCchHH--H-----HHHHHHHh
Q 042170 346 TERTLYVCNHRTLLDPLYLSFALK----KNLTAVTYS----LSRMSEILAPIKTVRMTRNRDQD--A-----KLVKSLLN 410 (543)
Q Consensus 346 ~~~~l~VaNH~S~LD~~vl~a~l~----~~~~~va~s----l~~v~~~l~~i~tv~v~R~r~~~--~-----~~~~~~L~ 410 (543)
+.++|||+||+|++|+++++.++. .+..++++. ++.++.++...|.+||+|+.+.+ - +-+.+.|+
T Consensus 628 ~~pvVfVpNHRS~lDyLLLsyvL~~~GL~~P~IAAGdNLL~~P~LG~LLR~~GAFFIRRsf~~d~LYsAVLreYI~~LLk 707 (1108)
T PTZ00374 628 RVAVVLLPLHRSYIDFIIMTYLLAVMGLPLPHVCAGDDFLRMGPIATLMRGSGAFFMRRSFRDDPLYAALFKEYVRHLVL 707 (1108)
T ss_pred CCcEEEEeCCccchHHHHHHHHHHhCCCCceEEEEchhhhcchHHHHHHHHCCeEEEeCCCCchHHHHHHHHHHHHHHHh
Confidence 359999999999999999999875 233455542 34456777888999999964332 1 22356688
Q ss_pred CCC-eEEecCccccCCCcccccchhhhhc-------------CCceEEEEEEecccc----ccccccCCcccccchh---
Q 042170 411 QGD-LVICPEGTTCREPYLLRFSPLFAEM-------------SDNIIPVASNSHVTM----FYGTTAGGLKCLDPFF--- 469 (543)
Q Consensus 411 ~G~-l~iFPEGTtt~g~~Ll~F~~~fa~l-------------~~pV~PVaI~~~~~~----~~gt~~~~~~~~d~~~--- 469 (543)
+|. +.+|||||+++.+.++++|.+.... ..+|+||+|.|.+-+ +.....+..|--+.+.
T Consensus 708 ~G~sVeiFpEGTRSRTGKLLpPK~GlLkmalda~l~g~~~v~dV~IVPVSIsYErVlE~elyakEl~G~kK~kEsl~~ll 787 (1108)
T PTZ00374 708 RRRPLEFFIEGTRSRTGKTMAPKLGLLKFICDTFYEGQQELDDVLIIPVSLSYDELLETTLYAKEQLGVSKPKENPGNLL 787 (1108)
T ss_pred CCCeEEEecCcCcCCCCCcccchhhHHHHHHHHHhhcccCCCCCEEEEEEEehhhhhhHHHHHHHhcCCCCCCCCHHHHH
Confidence 885 9999999999999999998754321 127999999998621 1101111112222221
Q ss_pred ----cccCCCCeEEEEEcccccCCc
Q 042170 470 ----FLMNPSPGYTMQLLEGVSGLS 490 (543)
Q Consensus 470 ----~l~~P~~~v~V~fL~pi~~~~ 490 (543)
.+.+....++|+|++|++-.+
T Consensus 788 k~ir~L~~~~GrV~V~FGEPISLre 812 (1108)
T PTZ00374 788 RARSLLKRRHGKIHVHIGEPVSLRS 812 (1108)
T ss_pred HHHHHHhccCceEEEECCCCccHHH
Confidence 133566789999999987543
No 44
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=99.28 E-value=7.1e-11 Score=113.14 Aligned_cols=102 Identities=15% Similarity=0.119 Sum_probs=75.8
Q ss_pred cCHHHHHHHH---hCC-cEEEEeCCcHHHHHHHHHhhCCCcEEEeceEEEe-CeEEeeeec---cCCCcHHHHHHHHHHh
Q 042170 147 VGLEIFEVLK---KGG-KTVAVSNMPQVMIDSFLRDYLDIDLVVGRELKVF-CGYFVGLME---DKKKNILVLQEIIKQE 218 (543)
Q Consensus 147 l~~ea~~~~~---~~g-~~v~VSAsp~~~vepfak~~lG~d~VlgTelev~-~G~~TG~~~---g~~~g~~Kv~~l~~~~ 218 (543)
+.|.+.+.++ +.| ++++||++++.+++++++. +|++.+++..+... +|.+++.-. +.++-.+.++++.+.+
T Consensus 81 ~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~-~g~~~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~~~~~ 159 (201)
T TIGR01491 81 LRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEK-LNPDYVYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERLKREL 159 (201)
T ss_pred CCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHH-hCCCeEEEEEEEEcCCCeEecceeeEEccccHHHHHHHHHHHh
Confidence 5555555444 667 8889999999999999986 89999999998874 688886521 1122123455555555
Q ss_pred cCC--ceEEEeCCCCCcchhcccccccCceeeccCCc
Q 042170 219 NSG--DVIGISSLNSSLDHYKLFLQQCNEVYLVRSTD 253 (543)
Q Consensus 219 ~~~--~~~aygD~~S~~D~~~m~L~~~~~~y~v~p~~ 253 (543)
+-. ..+.+|| |.+|.+ + ++.|+.++++||..
T Consensus 160 ~~~~~~~i~iGD--s~~D~~-~-a~~ag~~~a~~~~~ 192 (201)
T TIGR01491 160 NPSLTETVAVGD--SKNDLP-M-FEVADISISLGDEG 192 (201)
T ss_pred CCCHHHEEEEcC--CHhHHH-H-HHhcCCeEEECCCc
Confidence 533 5789999 999999 9 79999999999844
No 45
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.28 E-value=5.6e-11 Score=124.08 Aligned_cols=174 Identities=12% Similarity=0.096 Sum_probs=115.4
Q ss_pred cCeEEEEEcCCccccCCCchHHHHHHHHhhcchHHHHHHHHHHHHHHhcccchhHHHHHHHHhcCcccchhH-HHHhhch
Q 042170 62 SERTLIFNVEGFLLKSSSLFPYFMLVAFEAGGLIRAFLLFILYPLICLAGEEMGLKIMVMVSFFWVKKDNFR-VGRAVLP 140 (543)
Q Consensus 62 ~~~~a~FD~DGTLl~~~s~fp~f~~~a~~~~~~~r~~~ll~~~p~~~~l~~~~~~k~~~~~~f~G~~~~~~~-va~avlp 140 (543)
..++++||+||||+..+ .+.... ..++.+--...+.... ....+.-+..++.. +..+.|.+++.++ +.+. +|
T Consensus 109 ~~~LvvfDmDGTLI~~e-~i~eia-~~~g~~~~v~~it~~~---m~Geldf~esl~~r-v~~l~g~~~~il~~v~~~-l~ 181 (322)
T PRK11133 109 TPGLLVMDMDSTAIQIE-CIDEIA-KLAGTGEEVAEVTERA---MRGELDFEASLRQR-VATLKGADANILQQVREN-LP 181 (322)
T ss_pred CCCEEEEECCCCCcchH-HHHHHH-HHhCCchHHHHHHHHH---HcCCcCHHHHHHHH-HHHhCCCCHHHHHHHHHh-CC
Confidence 35899999999999663 444322 2222222221111100 00001112223322 2335676655555 4332 22
Q ss_pred hhHHHhcCHHHH---HHHHhCC-cEEEEeCCcHHHHHHHHHhhCCCcEEEeceEEEeCeEEeeeeccCCC-cHHHHHHHH
Q 042170 141 KFFLENVGLEIF---EVLKKGG-KTVAVSNMPQVMIDSFLRDYLDIDLVVGRELKVFCGYFVGLMEDKKK-NILVLQEII 215 (543)
Q Consensus 141 k~~~e~l~~ea~---~~~~~~g-~~v~VSAsp~~~vepfak~~lG~d~VlgTelev~~G~~TG~~~g~~~-g~~Kv~~l~ 215 (543)
+.|.+. +.+++.| ++++||+.+..++++.+++ +|+|.+.++++++.+|.+||.+.|..+ +..|.+.++
T Consensus 182 ------l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~-Lgld~~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~ 254 (322)
T PRK11133 182 ------LMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDK-LRLDAAVANELEIMDGKLTGNVLGDIVDAQYKADTLT 254 (322)
T ss_pred ------CChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHH-cCCCeEEEeEEEEECCEEEeEecCccCCcccHHHHHH
Confidence 455554 4455778 8899999999999998775 999999999999999999999998665 677888777
Q ss_pred HHhcC---C--ceEEEeCCCCCcchhcccccccCceeeccCCc
Q 042170 216 KQENS---G--DVIGISSLNSSLDHYKLFLQQCNEVYLVRSTD 253 (543)
Q Consensus 216 ~~~~~---~--~~~aygD~~S~~D~~~m~L~~~~~~y~v~p~~ 253 (543)
++... . ..+++|| +.+|.+ | ++.|+.++++|+.+
T Consensus 255 ~la~~lgi~~~qtIaVGD--g~NDl~-m-~~~AGlgiA~nAkp 293 (322)
T PRK11133 255 RLAQEYEIPLAQTVAIGD--GANDLP-M-IKAAGLGIAYHAKP 293 (322)
T ss_pred HHHHHcCCChhhEEEEEC--CHHHHH-H-HHHCCCeEEeCCCH
Confidence 76532 2 6789999 999999 9 79999999998633
No 46
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=99.24 E-value=1.2e-10 Score=113.85 Aligned_cols=170 Identities=12% Similarity=0.168 Sum_probs=107.8
Q ss_pred CeEEEEEcCCccccCCCchHHHHHHHHhhcchHHHHHHHHHHHHHHhcc---cchhHHHHHHHHhcCcccchhH-HHHhh
Q 042170 63 ERTLIFNVEGFLLKSSSLFPYFMLVAFEAGGLIRAFLLFILYPLICLAG---EEMGLKIMVMVSFFWVKKDNFR-VGRAV 138 (543)
Q Consensus 63 ~~~a~FD~DGTLl~~~s~fp~f~~~a~~~~~~~r~~~ll~~~p~~~~l~---~~~~~k~~~~~~f~G~~~~~~~-va~av 138 (543)
.++++|||||||+.+++ +..++ ..+ |.-...-. .+.. +.-+ -....+.. +..+.+.+.+.++ +.+..
T Consensus 14 ~k~iiFD~DGTL~~~~~-~~~l~-~~~---g~~~~~~~--~~~~-~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 84 (219)
T TIGR00338 14 KKLVVFDMDSTLINAET-IDEIA-KIA---GVEEEVSE--ITER-AMRGELDFKASLRER-VALLKGLPVELLKEVRENL 84 (219)
T ss_pred CCEEEEeCcccCCCchH-HHHHH-HHh---CCHHHHHH--HHHH-HHcCCCCHHHHHHHH-HHHhCCCCHHHHHHHHhcC
Confidence 46999999999998854 33321 122 22111000 0111 1111 11112211 2224466555555 43321
Q ss_pred chhhHHHhcCHHHH---HHHHhCC-cEEEEeCCcHHHHHHHHHhhCCCcEEEeceEEEeCeEEeeeeccCCC-cHHHHHH
Q 042170 139 LPKFFLENVGLEIF---EVLKKGG-KTVAVSNMPQVMIDSFLRDYLDIDLVVGRELKVFCGYFVGLMEDKKK-NILVLQE 213 (543)
Q Consensus 139 lpk~~~e~l~~ea~---~~~~~~g-~~v~VSAsp~~~vepfak~~lG~d~VlgTelev~~G~~TG~~~g~~~-g~~Kv~~ 213 (543)
.+.|.+. +.+++.| ++++||++++.+++++++. +|++.+.++++.+.+|.+||...+..+ +..|.+.
T Consensus 85 -------~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~ 156 (219)
T TIGR00338 85 -------PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDK-LGLDAAFANRLEVEDGKLTGLVEGPIVDASYKGKT 156 (219)
T ss_pred -------CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHH-cCCCceEeeEEEEECCEEEEEecCcccCCcccHHH
Confidence 1334444 4555667 8889999999999999986 899999999999999999999887655 3335555
Q ss_pred HHHH---hcCC--ceEEEeCCCCCcchhcccccccCceeeccCCc
Q 042170 214 IIKQ---ENSG--DVIGISSLNSSLDHYKLFLQQCNEVYLVRSTD 253 (543)
Q Consensus 214 l~~~---~~~~--~~~aygD~~S~~D~~~m~L~~~~~~y~v~p~~ 253 (543)
++.. ++-. ..+.+|| |.+|.+ + +..|+.++.+++.+
T Consensus 157 ~~~~~~~~~~~~~~~i~iGD--s~~Di~-a-a~~ag~~i~~~~~~ 197 (219)
T TIGR00338 157 LLILLRKEGISPENTVAVGD--GANDLS-M-IKAAGLGIAFNAKP 197 (219)
T ss_pred HHHHHHHcCCCHHHEEEEEC--CHHHHH-H-HHhCCCeEEeCCCH
Confidence 5543 3322 5789999 899999 9 79999999998754
No 47
>PLN02380 1-acyl-sn-glycerol-3-phosphate acyltransferase
Probab=99.22 E-value=9e-11 Score=124.56 Aligned_cols=104 Identities=21% Similarity=0.196 Sum_probs=71.5
Q ss_pred HHcCeEEEEeccCCCCccccCcccccCCCceEEEecCCCCCcHHHHHHhhcCc-----eeEEeee-hhhhh---hhhhcC
Q 042170 319 IFSGLRFTVITKPKTSRSFQNSRDCQKTERTLYVCNHRTLLDPLYLSFALKKN-----LTAVTYS-LSRMS---EILAPI 389 (543)
Q Consensus 319 ~~~Gvrv~v~G~~~~~~~~~~~~~~~~~~~~l~VaNH~S~LD~~vl~a~l~~~-----~~~va~s-l~~v~---~~l~~i 389 (543)
+.+|++++|.|.+.... . -....+|++|||+|++|++++....++. ..++.|+ +..++ ..+...
T Consensus 63 ~~~Gvkv~V~gd~~~~~---~----~g~e~~lIisNHqS~~D~l~l~~l~~r~~~l~~~~~vlKkeL~~iPv~Gw~~~~~ 135 (376)
T PLN02380 63 WWAGVKVQLYADEETFE---L----MGKEHALVISNHRSDIDWLVGWILAQRSGCLGSALAVMKKSSKFLPVIGWSMWFS 135 (376)
T ss_pred HcCCeEEEEEecchhhc---c----CCCCcEEEEECCChhHHHHHHHHHhhhcccccceeEeeHHHhhhccHHHHHHHHc
Confidence 57899999999765320 0 0124799999999999999987775442 4566653 33332 223346
Q ss_pred ceeEeecCchHHHHHHH---HHHhC---CC-eEEecCccccCCCccc
Q 042170 390 KTVRMTRNRDQDAKLVK---SLLNQ---GD-LVICPEGTTCREPYLL 429 (543)
Q Consensus 390 ~tv~v~R~r~~~~~~~~---~~L~~---G~-l~iFPEGTtt~g~~Ll 429 (543)
+.+|++|+.+.|.+.++ +.+++ |. +++|||||+.....+.
T Consensus 136 ~~IfIdR~~~~d~~~l~~~~~~l~~~~~~~wllIFPEGTR~~~~k~~ 182 (376)
T PLN02380 136 EYVFLERSWAKDENTLKSGFQRLKDFPRPFWLALFVEGTRFTQAKLL 182 (376)
T ss_pred CCEEecCCchhHHHHHHHHHHHHhhCCCccEEEEecCcCCCCchhhH
Confidence 89999997666655554 44665 43 9999999998876543
No 48
>cd07984 LPLAT_LABLAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LABLAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as lipid A biosynthesis lauroyl/myristoyl (LABLAT, HtrB) acyltransferases and similar proteins.
Probab=99.21 E-value=1.4e-10 Score=110.92 Aligned_cols=159 Identities=14% Similarity=0.161 Sum_probs=112.0
Q ss_pred EEEEeccCCCCccccCcccccCCCceEEEecCCCCCcHHHHHHhh-cCceeEEeeeh--hhhhhhhh----cCceeEeec
Q 042170 324 RFTVITKPKTSRSFQNSRDCQKTERTLYVCNHRTLLDPLYLSFAL-KKNLTAVTYSL--SRMSEILA----PIKTVRMTR 396 (543)
Q Consensus 324 rv~v~G~~~~~~~~~~~~~~~~~~~~l~VaNH~S~LD~~vl~a~l-~~~~~~va~sl--~~v~~~l~----~i~tv~v~R 396 (543)
++++.|.+..+.. ...++|+|+++||.|++|.+...... +.++.++.+.. ..+..++. ..|...|+|
T Consensus 3 ~~~i~~~e~l~~~------~~~~~~~il~~~H~g~~e~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~r~~~g~~~i~~ 76 (192)
T cd07984 3 RVEREGLEHLEAA------LAKGKGVILLTAHFGNWELAGLALALLGYPVTVVYRPLKNPLLDRLITRGRERFGARLIPR 76 (192)
T ss_pred eeEecCHHHHHHH------HHcCCCEEEEcccchHHHHHHHHHHhcCCCeeEEEECCCCHHHHHHHHHHHHhcCCeeEcC
Confidence 4667776654310 01247999999999999999877776 66777777543 22334443 346667776
Q ss_pred CchHHHHHHHHHHhCCC-eEEecCccccCCC-ccccc-------chhhhhcC----CceEEEEEEeccccccccccCCcc
Q 042170 397 NRDQDAKLVKSLLNQGD-LVICPEGTTCREP-YLLRF-------SPLFAEMS----DNIIPVASNSHVTMFYGTTAGGLK 463 (543)
Q Consensus 397 ~r~~~~~~~~~~L~~G~-l~iFPEGTtt~g~-~Ll~F-------~~~fa~l~----~pV~PVaI~~~~~~~~gt~~~~~~ 463 (543)
+ ...+++.+.|++|. +++||||+.+... ...+| +.+++.++ .||+|+.+.+..
T Consensus 77 ~--~~~~~~~~~l~~g~~v~i~pD~~~~~~~~~~~~F~G~~~~~~~G~~~lA~~~~~pivp~~~~~~~------------ 142 (192)
T cd07984 77 G--GGLRELIRALKKGEIVGILPDQDPGRKGGVFVPFFGRPAATPTGPARLALKTGAPVVPAFAYRLP------------ 142 (192)
T ss_pred C--chHHHHHHHHhCCCEEEEEeCCCCCCCCCEEeccCCCCccchHHHHHHHHHHCCcEEEEEEEEcC------------
Confidence 5 57788889999997 8999999998764 44454 66666554 499999997631
Q ss_pred cccchhcccCCCCeEEEEEcccccCCcccCCCCCCHHHHHHHHHHHHHHHhCCCc
Q 042170 464 CLDPFFFLMNPSPGYTMQLLEGVSGLSMCQDGNESRFDVANYVQSELGKALGFEC 518 (543)
Q Consensus 464 ~~d~~~~l~~P~~~v~V~fL~pi~~~~~~~~~~~~~~elA~~vq~~Ia~~Lg~~~ 518 (543)
...|+|+|++|+++. +.++.+++++++.+.+.+.+.-.+
T Consensus 143 -----------~~~~~i~~~~~i~~~-----~~~~~~~~~~~~~~~lE~~i~~~P 181 (192)
T cd07984 143 -----------GGGYRIEFEPPLENP-----PSEDVEEDTQRLNDALEAAIREHP 181 (192)
T ss_pred -----------CCCEEEEEeCCCCCC-----CCCCHHHHHHHHHHHHHHHHHhCc
Confidence 124999999999872 256788888888888877765433
No 49
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=98.93 E-value=1e-08 Score=100.80 Aligned_cols=110 Identities=13% Similarity=0.035 Sum_probs=76.5
Q ss_pred cCHHHHHHH---HhCC-cEEEEeCCcHHHHHHHHHhhCCCcEEEeceEEEeCeEEeeeeccC-------CCcHHHHHHHH
Q 042170 147 VGLEIFEVL---KKGG-KTVAVSNMPQVMIDSFLRDYLDIDLVVGRELKVFCGYFVGLMEDK-------KKNILVLQEII 215 (543)
Q Consensus 147 l~~ea~~~~---~~~g-~~v~VSAsp~~~vepfak~~lG~d~VlgTelev~~G~~TG~~~g~-------~~g~~Kv~~l~ 215 (543)
+.|.+.+.+ ++.| ++++||++++.+++++++.++..+.+++.++.+.++..+.....+ .||..|..+++
T Consensus 75 l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K~~~l~ 154 (219)
T PRK09552 75 IREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGLIPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCKPSLIR 154 (219)
T ss_pred cCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHhCCcCcEEEeEEEecCCeeEEeccCCccccccccCCCchHHHHH
Confidence 566555544 4677 888999999999999998743335688888877655555433322 25455888888
Q ss_pred HHhcCC-ceEEEeCCCCCcchhcccccccCceeeccC----CcccCCccc
Q 042170 216 KQENSG-DVIGISSLNSSLDHYKLFLQQCNEVYLVRS----TDKRSWQHL 260 (543)
Q Consensus 216 ~~~~~~-~~~aygD~~S~~D~~~m~L~~~~~~y~v~p----~~~~~w~~l 260 (543)
++.... ..+.+|| |.+|.+ + ...|+.+++... .++++|+..
T Consensus 155 ~~~~~~~~~i~iGD--s~~Di~-a-a~~Ag~~~a~~~l~~~~~~~~~~~~ 200 (219)
T PRK09552 155 KLSDTNDFHIVIGD--SITDLE-A-AKQADKVFARDFLITKCEELGIPYT 200 (219)
T ss_pred HhccCCCCEEEEeC--CHHHHH-H-HHHCCcceeHHHHHHHHHHcCCCcc
Confidence 765443 6789999 999999 8 788998777432 123555555
No 50
>KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]
Probab=98.86 E-value=1.6e-09 Score=110.05 Aligned_cols=173 Identities=11% Similarity=-0.105 Sum_probs=116.9
Q ss_pred EecCCCCCcHHHHHHhhcCceeEEeee----hhhhhhhhhcCceeEeec----CchHHHHHHH-HHHhCC---CeEEecC
Q 042170 352 VCNHRTLLDPLYLSFALKKNLTAVTYS----LSRMSEILAPIKTVRMTR----NRDQDAKLVK-SLLNQG---DLVICPE 419 (543)
Q Consensus 352 VaNH~S~LD~~vl~a~l~~~~~~va~s----l~~v~~~l~~i~tv~v~R----~r~~~~~~~~-~~L~~G---~l~iFPE 419 (543)
.+.|.|..|-+++-+.- -...+.+. +.-+...+..+.-+++.| +|+..++.+. ..++.| ++++|||
T Consensus 12 s~p~ss~~d~~~~~s~s--~~s~v~~~~~~~~~~~~r~~~y~~~~l~~~~~~ds~k~tV~~i~~~~~~~~~~~qIll~~~ 89 (412)
T KOG4666|consen 12 SNPPSSKEDRPLLKSES--DLAAAIEELDKKFAPYARTDLYGTMGLGPFPMTENIKLAVALVTLVPLRFLLSMSILLLYY 89 (412)
T ss_pred CCCCccccccchhhhcc--cHHHHHHhhcccCCchhhhhhhccceeccCCChHHHHHHHHHHHHhhhccCCCceeeeeec
Confidence 34588888877765541 11111111 111122222333445555 3444455544 345666 4999999
Q ss_pred ccccCCCcccccchhhhhcCCceEEEEEEeccccccccccCCcccccchhcccC-CCCeEEEEEcccccCCcccCCCCCC
Q 042170 420 GTTCREPYLLRFSPLFAEMSDNIIPVASNSHVTMFYGTTAGGLKCLDPFFFLMN-PSPGYTMQLLEGVSGLSMCQDGNES 498 (543)
Q Consensus 420 GTtt~g~~Ll~F~~~fa~l~~pV~PVaI~~~~~~~~gt~~~~~~~~d~~~~l~~-P~~~v~V~fL~pi~~~~~~~~~~~~ 498 (543)
||++ .+.-||++.+..+.|+|||.++|....-+-+-|.+...+...|+++. -...++++|++.-.++.. +..+
T Consensus 90 ~~C~---~~~~Fk~~~~~P~~~~q~~~l~y~n~~~~~t~Wq~~~~v~~~~~~~~~l~~~~~~~~i~~~~P~~e---e~~d 163 (412)
T KOG4666|consen 90 LICR---VFTLFSAPYRGPEEEEDEGGVVFQEDYAHMEGWKRTVIVRSGRFLSRVLLFVFGFYWIHESCPDRD---SDMD 163 (412)
T ss_pred cceE---EEEEecCCccCCCCCcCcceEeccccccceeccccchHHHHHHHHHHHHHhheeEEEEeccCCChh---hhcC
Confidence 9998 88899999999999999999999886543222333333566676543 345699999977766432 3567
Q ss_pred HHHHHHHHHHHHHHHhCCCccCCChhhHHHhhhc
Q 042170 499 RFDVANYVQSELGKALGFECTKLTRRDKYQILAG 532 (543)
Q Consensus 499 ~~elA~~vq~~Ia~~Lg~~~T~~T~~Dk~~~lag 532 (543)
+.-.|+.++..+|++||.+.|.+|.+|+-++++-
T Consensus 164 ~~~~at~v~~~maealg~~vtd~t~edc~l~vs~ 197 (412)
T KOG4666|consen 164 SNPKTTSTEINMAEALGTEVTDRTGEDCSLHVSY 197 (412)
T ss_pred CcccchhHHHHHHHhhCCCCCCCchHHHHHHHhh
Confidence 7889999999999999999999999999999873
No 51
>PLN02954 phosphoserine phosphatase
Probab=98.83 E-value=3.8e-08 Score=96.48 Aligned_cols=98 Identities=15% Similarity=0.128 Sum_probs=70.3
Q ss_pred cCHHHHHHHH---hCC-cEEEEeCCcHHHHHHHHHhhCCCc--EEEeceEEEe-CeEEeeeeccC-CC-cHHHHHHHHHH
Q 042170 147 VGLEIFEVLK---KGG-KTVAVSNMPQVMIDSFLRDYLDID--LVVGRELKVF-CGYFVGLMEDK-KK-NILVLQEIIKQ 217 (543)
Q Consensus 147 l~~ea~~~~~---~~g-~~v~VSAsp~~~vepfak~~lG~d--~VlgTelev~-~G~~TG~~~g~-~~-g~~Kv~~l~~~ 217 (543)
+.|.+.+.++ +.| ++++||++++.+++++++. +|++ .+.++++.+. +|+++|..... .| +..|.+.++..
T Consensus 85 l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~-~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~~~ 163 (224)
T PLN02954 85 LSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAI-LGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQHI 163 (224)
T ss_pred CCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHH-hCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHHHHHH
Confidence 5566666554 667 7889999999999999986 8997 6999999884 79999976432 23 34566666654
Q ss_pred hc---CCceEEEeCCCCCcchhcccccccCceeec
Q 042170 218 EN---SGDVIGISSLNSSLDHYKLFLQQCNEVYLV 249 (543)
Q Consensus 218 ~~---~~~~~aygD~~S~~D~~~m~L~~~~~~y~v 249 (543)
.. .+..+.+|| |.+|.+ + ...++-.+.+
T Consensus 164 ~~~~~~~~~i~iGD--s~~Di~-a-a~~~~~~~~~ 194 (224)
T PLN02954 164 KKKHGYKTMVMIGD--GATDLE-A-RKPGGADLFI 194 (224)
T ss_pred HHHcCCCceEEEeC--CHHHHH-h-hhcCCCCEEE
Confidence 43 235789999 999998 7 5554433333
No 52
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.75 E-value=7.8e-08 Score=92.84 Aligned_cols=115 Identities=17% Similarity=0.102 Sum_probs=80.6
Q ss_pred hcCcccchhH-HHHhhchhhHHHhcCHHHHHH---HHhCCcEEEEeCCcHHHHHHHHHhhCCCcEEEeceEEEe-CeEEe
Q 042170 124 FFWVKKDNFR-VGRAVLPKFFLENVGLEIFEV---LKKGGKTVAVSNMPQVMIDSFLRDYLDIDLVVGRELKVF-CGYFV 198 (543)
Q Consensus 124 f~G~~~~~~~-va~avlpk~~~e~l~~ea~~~---~~~~g~~v~VSAsp~~~vepfak~~lG~d~VlgTelev~-~G~~T 198 (543)
-.|++.++++ +.+..- +.|.+.+. +++..++++||++++.++++++++ +|++.+.+.++... +|.++
T Consensus 52 ~~~~~~~~i~~~~~~~~-------~~pg~~e~L~~L~~~~~~~IvS~~~~~~~~~~l~~-~gl~~~f~~~~~~~~~~~i~ 123 (205)
T PRK13582 52 EHGLGLADIQEVIATLD-------PLPGAVEFLDWLRERFQVVILSDTFYEFAGPLMRQ-LGWPTLFCHSLEVDEDGMIT 123 (205)
T ss_pred HcCCCHHHHHHHHHhCC-------CCCCHHHHHHHHHhcCCEEEEeCCcHHHHHHHHHH-cCCchhhcceEEECCCCeEE
Confidence 3467777776 444321 23444443 443468889999999999999986 89998899988874 78888
Q ss_pred eeeccCCCcHHHHHHHHHHhcCC-ceEEEeCCCCCcchhcccccccCceeeccCC
Q 042170 199 GLMEDKKKNILVLQEIIKQENSG-DVIGISSLNSSLDHYKLFLQQCNEVYLVRST 252 (543)
Q Consensus 199 G~~~g~~~g~~Kv~~l~~~~~~~-~~~aygD~~S~~D~~~m~L~~~~~~y~v~p~ 252 (543)
|.- .++...|...++.+.... ..+.+|| |..|.+ + ...++.+..+++.
T Consensus 124 ~~~--~~~p~~k~~~l~~~~~~~~~~v~iGD--s~~D~~-~-~~aa~~~v~~~~~ 172 (205)
T PRK13582 124 GYD--LRQPDGKRQAVKALKSLGYRVIAAGD--SYNDTT-M-LGEADAGILFRPP 172 (205)
T ss_pred Ccc--ccccchHHHHHHHHHHhCCeEEEEeC--CHHHHH-H-HHhCCCCEEECCC
Confidence 865 223345666666443222 6789999 999999 8 7888887777653
No 53
>KOG2898 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]
Probab=98.69 E-value=5e-08 Score=102.05 Aligned_cols=163 Identities=23% Similarity=0.194 Sum_probs=107.5
Q ss_pred CceEEEecCCCCCcHHHHHHh-----hcCc----eeEEeeehhhhhhhhhcCceeEeecCchH----HHHHHHHHHhCC-
Q 042170 347 ERTLYVCNHRTLLDPLYLSFA-----LKKN----LTAVTYSLSRMSEILAPIKTVRMTRNRDQ----DAKLVKSLLNQG- 412 (543)
Q Consensus 347 ~~~l~VaNH~S~LD~~vl~a~-----l~~~----~~~va~sl~~v~~~l~~i~tv~v~R~r~~----~~~~~~~~L~~G- 412 (543)
.+.+.|+||.|-+|-++++.. +++. +..+-..+++.+. .+.-+|.... -.+..+++..++
T Consensus 137 ~g~i~v~nh~Sp~d~~vls~~~~~~~v~q~~~~~v~viq~~~~~~s~------~~~f~~~e~~d~~~~~~~~~e~~~~~~ 210 (354)
T KOG2898|consen 137 EGGICVANHFSPWDVLVLSVDNCYALVGQVHGGLVGVIQLALSRASL------HFWFERLEFTDRQVVAKRLAEHVWNER 210 (354)
T ss_pred CCCCceecccCceeEEEeccccchheeeecccceEEEeeehhhhhch------hhhhhcchhhhhHhhhhhhhHHHhcCC
Confidence 457999999999999998866 1111 1111011222222 2222332222 234445555554
Q ss_pred --CeEEecCccccCCCcccccc-hhhhhcCCceEEEEEEeccccccccccC--CcccccchhcccCCCC-eEEEEEcccc
Q 042170 413 --DLVICPEGTTCREPYLLRFS-PLFAEMSDNIIPVASNSHVTMFYGTTAG--GLKCLDPFFFLMNPSP-GYTMQLLEGV 486 (543)
Q Consensus 413 --~l~iFPEGTtt~g~~Ll~F~-~~fa~l~~pV~PVaI~~~~~~~~gt~~~--~~~~~d~~~~l~~P~~-~v~V~fL~pi 486 (543)
++++|||||+.++..+..|+ .+-++.+..|+|+||.|...++.. -+. ...+.-.++.+|.... ..++.+++|+
T Consensus 211 ~~~ii~fpegtCinn~~~~~fk~k~~~e~~~~i~pvaik~~~~~~~~-f~~s~~~s~~~~l~~~~ts~~~v~~i~~l~~~ 289 (354)
T KOG2898|consen 211 KEPILLFPEGTCINNTKVMQFKLKGSFEEGVKIYPVAIKYDPRFGDA-FWNSPELSFTRYLLELMTSWAIVCDIWYLPPM 289 (354)
T ss_pred CCcEEEeecceeeCCceeEEEecCCChhhcceeeeeeeecCcccccc-ccCCccccHHHHHHHHHhhhheeeeeeecccE
Confidence 48999999999999999999 888999999999999998764311 011 1111222334455443 4799999999
Q ss_pred cCCcccCCCCCCHHHHHHHHHHHHHHHhCCCccCC
Q 042170 487 SGLSMCQDGNESRFDVANYVQSELGKALGFECTKL 521 (543)
Q Consensus 487 ~~~~~~~~~~~~~~elA~~vq~~Ia~~Lg~~~T~~ 521 (543)
.+. .++++-++|+++...|++.-|......
T Consensus 290 ~r~-----~~et~t~~a~~v~~~ig~~~gl~~~~~ 319 (354)
T KOG2898|consen 290 RRD-----NDETATQFANRVKSLIGKSAGLKDLEW 319 (354)
T ss_pred Eee-----cccchhHHHHHHHHHHHHhhCCcccCc
Confidence 983 478999999999999999999876554
No 54
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=98.54 E-value=1.6e-06 Score=81.95 Aligned_cols=112 Identities=15% Similarity=0.090 Sum_probs=75.0
Q ss_pred cCcccchhH-HHHhhchhhHHHhcCHHHHH---HHHhCC-cEEEEeCCcHHHHHHHHHhhCCC----cEEEeceEEEe-C
Q 042170 125 FWVKKDNFR-VGRAVLPKFFLENVGLEIFE---VLKKGG-KTVAVSNMPQVMIDSFLRDYLDI----DLVVGRELKVF-C 194 (543)
Q Consensus 125 ~G~~~~~~~-va~avlpk~~~e~l~~ea~~---~~~~~g-~~v~VSAsp~~~vepfak~~lG~----d~VlgTelev~-~ 194 (543)
.|.+.+++. +.+.. .+.+++.+ .+++.| +++++|++++.+++.+++. +|+ |.+++.+..+. +
T Consensus 57 ~~~~~~~~~~~~~~~-------~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~-~~l~~~f~~i~~~~~~~~~~ 128 (188)
T TIGR01489 57 SGLKEDEILEVLKSA-------PIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEG-IGEKDVFIEIYSNPASFDND 128 (188)
T ss_pred cCCCHHHHHHHHHhC-------CCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-cCChhheeEEeccCceECCC
Confidence 355555555 43321 24444444 444667 8889999999999999875 675 47999998874 7
Q ss_pred eEEeeeecc-----CC-CcHHHHHHHHHHhcC-C-ceEEEeCCCCCcchhcccccccCceee
Q 042170 195 GYFVGLMED-----KK-KNILVLQEIIKQENS-G-DVIGISSLNSSLDHYKLFLQQCNEVYL 248 (543)
Q Consensus 195 G~~TG~~~g-----~~-~g~~Kv~~l~~~~~~-~-~~~aygD~~S~~D~~~m~L~~~~~~y~ 248 (543)
|++++.-.. ++ +|..|.+.++.+... . ..+.+|| |.+|.+ + ...|+-.++
T Consensus 129 g~~~~~~~~~~~~~~~~~g~~K~~~~~~~~~~~~~~~i~iGD--~~~D~~-a-a~~~d~~~a 186 (188)
T TIGR01489 129 GRHIVWPHHCHGCCSCPCGCCKGKVIHKLSEPKYQHIIYIGD--GVTDVC-P-AKLSDVVFA 186 (188)
T ss_pred CcEEEecCCCCccCcCCCCCCHHHHHHHHHhhcCceEEEECC--Ccchhc-h-HhcCCcccc
Confidence 999886554 11 244576666655443 3 6789999 999998 7 566765543
No 55
>KOG2847 consensus Phosphate acyltransferase [Lipid transport and metabolism]
Probab=98.25 E-value=1.3e-06 Score=86.60 Aligned_cols=139 Identities=17% Similarity=0.121 Sum_probs=87.1
Q ss_pred CCCceEEEecCCCCCcHHHHHHhhcCceeEEeeeh-------------hhhhhhhhcCceeEeecCc---hHHHHHHHHH
Q 042170 345 KTERTLYVCNHRTLLDPLYLSFALKKNLTAVTYSL-------------SRMSEILAPIKTVRMTRNR---DQDAKLVKSL 408 (543)
Q Consensus 345 ~~~~~l~VaNH~S~LD~~vl~a~l~~~~~~va~sl-------------~~v~~~l~~i~tv~v~R~r---~~~~~~~~~~ 408 (543)
++.|.|-||||.|.+|-+.+-++++-+...-.+.+ ...+.+++-...+++.|+- ++.....-+.
T Consensus 67 ~n~PLiTVSNH~S~vDDP~~W~~L~~~~f~~~~~~RWtlaAhdICF~n~~~S~fFslGkclPi~RG~GvYQ~gmd~~i~k 146 (286)
T KOG2847|consen 67 PNRPLITVSNHMSCVDDPLVWGILKLRLFLNLKNIRWTLAAHDICFTNPFHSNFFSLGKCLPIVRGEGVYQKGMDFAIEK 146 (286)
T ss_pred CCCCeEEEecchhccCCceeEEEechhhhcchhhhheehhhhhchhccHHHHHHHhcCceEeeeccCccccccHHHHHHh
Confidence 36899999999999998888877654422211111 1122334444688999853 2234444567
Q ss_pred HhCCC-eEEecCcccc-CCCcccccchhhhhcC--CceEEEEEEeccccccccccCCcccccchhcccCCCCeEEEEEcc
Q 042170 409 LNQGD-LVICPEGTTC-REPYLLRFSPLFAEMS--DNIIPVASNSHVTMFYGTTAGGLKCLDPFFFLMNPSPGYTMQLLE 484 (543)
Q Consensus 409 L~~G~-l~iFPEGTtt-~g~~Ll~F~~~fa~l~--~pV~PVaI~~~~~~~~gt~~~~~~~~d~~~~l~~P~~~v~V~fL~ 484 (543)
|+.|+ |.|||||-.+ .+...++||=+...+. .+..|+.+-.++.-|......+. -..-+++..++|++++
T Consensus 147 Ln~g~WVHiFPEGkV~q~~~~~~rfKWGigRlI~ea~~~PIVlPi~h~Gmedi~P~~~------p~vp~~Gk~vtV~IG~ 220 (286)
T KOG2847|consen 147 LNDGSWVHIFPEGKVNQMEKEMLRFKWGIGRLILEAPKPPIVLPIWHTGMEDIMPEAP------PYVPRFGKTVTVTIGD 220 (286)
T ss_pred cCCCCeEEECCCceeeccccchhheeccceeeeecCCCCCEEeehhhhhHHHhCccCC------CccCCCCCEEEEEeCC
Confidence 88898 9999999999 5669999998777654 36666665544432211100010 0112445679999999
Q ss_pred cccCC
Q 042170 485 GVSGL 489 (543)
Q Consensus 485 pi~~~ 489 (543)
|+.-+
T Consensus 221 P~~~~ 225 (286)
T KOG2847|consen 221 PINFD 225 (286)
T ss_pred Ccchh
Confidence 99753
No 56
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=98.07 E-value=2.7e-05 Score=79.85 Aligned_cols=165 Identities=15% Similarity=0.088 Sum_probs=101.4
Q ss_pred CeEEEEEcCCccccCC--------CchHHHHHHHHhhcch-----HHHHHHH--HHHHHHHh--cccchhHHHHHHH---
Q 042170 63 ERTLIFNVEGFLLKSS--------SLFPYFMLVAFEAGGL-----IRAFLLF--ILYPLICL--AGEEMGLKIMVMV--- 122 (543)
Q Consensus 63 ~~~a~FD~DGTLl~~~--------s~fp~f~~~a~~~~~~-----~r~~~ll--~~~p~~~~--l~~~~~~k~~~~~--- 122 (543)
+--++-|||.|||+-. |+|-- ++.... ......| -+||+=.= +..+.|.+.|+--
T Consensus 22 ~lqvisDFD~Tlt~~~~~~g~~~~s~~~~-----~~~~~~~~~~~~~~~~~l~~~Y~PiE~d~~~~~~eK~~~m~eWw~k 96 (277)
T TIGR01544 22 KLQIISDFDYTLSRFSYEDGKRCPTCHGI-----FDNCKLLTDECRKKLLQLKEKYYPIEVDPVLTVEEKYPYMVEWWTK 96 (277)
T ss_pred heEEeeccCccceeeecCCCCCCcchHhH-----HhhCCCCCHHHHHHHHHHHhhccceecCCCCChHHhhhHHHHHHHH
Confidence 4467899999999764 56654 333332 1111111 22233220 2235666655421
Q ss_pred ---Hhc--CcccchhH-HHHhhchhhHHHhcCHHHHH---HHHhCC-cEEEEeCCcHHHHHHHHHhhCCCc----EEEec
Q 042170 123 ---SFF--WVKKDNFR-VGRAVLPKFFLENVGLEIFE---VLKKGG-KTVAVSNMPQVMIDSFLRDYLDID----LVVGR 188 (543)
Q Consensus 123 ---~f~--G~~~~~~~-va~avlpk~~~e~l~~ea~~---~~~~~g-~~v~VSAsp~~~vepfak~~lG~d----~VlgT 188 (543)
.+. ++++++++ +.++- .-.++|.+.+ .+++.| .+++||++++..+++.++. +|++ .|++.
T Consensus 97 ~~~l~~~~~~~~e~i~~~v~~~-----~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~-lgl~~~~~~IvSN 170 (277)
T TIGR01544 97 SHGLLVQQAFPKAKIKEIVAES-----DVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQ-AGVYHPNVKVVSN 170 (277)
T ss_pred HHHHHhcCCCCHHHHHHHHhhc-----CCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHH-cCCCCcCceEEee
Confidence 133 44666666 44310 0113444444 455677 8999999999999999997 7875 89999
Q ss_pred eEEE-eCeEEeeeeccCCC-cHHHHHHHH----HHhcC----CceEEEeCCCCCcchhccccccc
Q 042170 189 ELKV-FCGYFVGLMEDKKK-NILVLQEII----KQENS----GDVIGISSLNSSLDHYKLFLQQC 243 (543)
Q Consensus 189 elev-~~G~~TG~~~g~~~-g~~Kv~~l~----~~~~~----~~~~aygD~~S~~D~~~m~L~~~ 243 (543)
+|++ .+|.+|| +.++.. ...|.+.+. +.++. ...+..|| |.+|.+ | -.=+
T Consensus 171 ~L~f~~dGvltG-~~~P~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGD--s~~Dl~-m-a~g~ 230 (277)
T TIGR01544 171 FMDFDEDGVLKG-FKGPLIHTFNKNHDVALRNTEYFNQLKDRSNIILLGD--SQGDLR-M-ADGV 230 (277)
T ss_pred eEEECCCCeEeC-CCCCcccccccHHHHHHHHHHHhCccCCcceEEEECc--Chhhhh-H-hcCC
Confidence 9999 5899999 566644 345665444 33441 26789999 999999 8 3444
No 57
>KOG1505 consensus Lysophosphatidic acid acyltransferase LPAAT and related acyltransferases [Lipid transport and metabolism]
Probab=97.96 E-value=3.2e-05 Score=81.63 Aligned_cols=77 Identities=29% Similarity=0.363 Sum_probs=50.8
Q ss_pred CCceEEEecCCCCCcHHHHHHhhcCcee-----EEeeehhhhhhhhhc----CceeEeecCchHHHHHHH---HHHhCC-
Q 042170 346 TERTLYVCNHRTLLDPLYLSFALKKNLT-----AVTYSLSRMSEILAP----IKTVRMTRNRDQDAKLVK---SLLNQG- 412 (543)
Q Consensus 346 ~~~~l~VaNH~S~LD~~vl~a~l~~~~~-----~va~sl~~v~~~l~~----i~tv~v~R~r~~~~~~~~---~~L~~G- 412 (543)
+..+|++|||+|.+|-+.+-..+.++-. .+.|+..+.-+++.+ .+-+|++|+.+.|-+.+. +.+++-
T Consensus 70 ~e~alli~NH~~~~Dwl~~w~~~~~~G~l~~~~~~lK~~lk~~Pi~Gw~~~~~~fiFl~R~~~~d~~~l~~~~k~l~~~~ 149 (346)
T KOG1505|consen 70 KERALLIANHQSEVDWLYLWTYAQRKGVLGNVKIVLKKSLKYLPIFGWGMWFHGFIFLERNWEKDEKTLISLLKHLKDSP 149 (346)
T ss_pred CCceEEEeccccccchhhHHHHHhcCCchhhhhHHHhhHHHhCcchheeeeecceEEEecchhhhHHHHHHHHHHhccCC
Confidence 4589999999999999999977655522 122222221223332 378999997766655554 445543
Q ss_pred C---eEEecCccc
Q 042170 413 D---LVICPEGTT 422 (543)
Q Consensus 413 ~---l~iFPEGTt 422 (543)
+ +++|||||+
T Consensus 150 ~~~wLlLFPEGT~ 162 (346)
T KOG1505|consen 150 DPYWLLLFPEGTR 162 (346)
T ss_pred CceEEEEecCCCc
Confidence 2 899999994
No 58
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=97.94 E-value=5.3e-05 Score=73.30 Aligned_cols=91 Identities=14% Similarity=0.068 Sum_probs=58.1
Q ss_pred cCHHHHHHHH---hCC-cEEEEeCCcHHHHHHHHHhhCCCcEEEeceEEEeCeEEeeeeccCCC-cHHHHHHHHHHhcCC
Q 042170 147 VGLEIFEVLK---KGG-KTVAVSNMPQVMIDSFLRDYLDIDLVVGRELKVFCGYFVGLMEDKKK-NILVLQEIIKQENSG 221 (543)
Q Consensus 147 l~~ea~~~~~---~~g-~~v~VSAsp~~~vepfak~~lG~d~VlgTelev~~G~~TG~~~g~~~-g~~Kv~~l~~~~~~~ 221 (543)
+.|.+.+.++ +.| +++++|++++.+++.+++. +|++... +..+++.-.+... .++-...+.+.++-.
T Consensus 86 ~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~-~~l~~~f-------~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~ 157 (213)
T TIGR01449 86 VFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLEL-LGLAKYF-------SVLIGGDSLAQRKPHPDPLLLAAERLGVA 157 (213)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-cCcHhhC-------cEEEecCCCCCCCCChHHHHHHHHHcCCC
Confidence 5666666555 667 8889999999999999986 7865322 1112221111111 234455555555533
Q ss_pred --ceEEEeCCCCCcchhcccccccCceeec
Q 042170 222 --DVIGISSLNSSLDHYKLFLQQCNEVYLV 249 (543)
Q Consensus 222 --~~~aygD~~S~~D~~~m~L~~~~~~y~v 249 (543)
..+.+|| |..|.+ + ...+|-+.+.
T Consensus 158 ~~~~~~igD--s~~d~~-a-a~~aG~~~i~ 183 (213)
T TIGR01449 158 PQQMVYVGD--SRVDIQ-A-ARAAGCPSVL 183 (213)
T ss_pred hhHeEEeCC--CHHHHH-H-HHHCCCeEEE
Confidence 5789999 899998 7 6778866553
No 59
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=97.92 E-value=0.00021 Score=70.14 Aligned_cols=92 Identities=14% Similarity=0.037 Sum_probs=59.6
Q ss_pred cCHHHHHHHH---hCC-cEEEEeCCcHHHHHHHHHhhCCCcEEEeceEEEeCeEEeeeeccCCC-cHHHHHHHHHHhcCC
Q 042170 147 VGLEIFEVLK---KGG-KTVAVSNMPQVMIDSFLRDYLDIDLVVGRELKVFCGYFVGLMEDKKK-NILVLQEIIKQENSG 221 (543)
Q Consensus 147 l~~ea~~~~~---~~g-~~v~VSAsp~~~vepfak~~lG~d~VlgTelev~~G~~TG~~~g~~~-g~~Kv~~l~~~~~~~ 221 (543)
+.|.+.+.++ +.| +++++|+.+...+++++++ +|++..... .+++...+... ..+-..++.+.++-.
T Consensus 93 ~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~-~~l~~~f~~-------~~~~~~~~~~Kp~~~~~~~~~~~~~~~ 164 (222)
T PRK10826 93 LLPGVREALALCKAQGLKIGLASASPLHMLEAVLTM-FDLRDYFDA-------LASAEKLPYSKPHPEVYLNCAAKLGVD 164 (222)
T ss_pred CCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHh-CcchhcccE-------EEEcccCCCCCCCHHHHHHHHHHcCCC
Confidence 5555655444 677 8889999999999999986 887755432 22221111111 234555555555543
Q ss_pred --ceEEEeCCCCCcchhcccccccCceeecc
Q 042170 222 --DVIGISSLNSSLDHYKLFLQQCNEVYLVR 250 (543)
Q Consensus 222 --~~~aygD~~S~~D~~~m~L~~~~~~y~v~ 250 (543)
..+.+|| |..|.+ . ...+|-+.+.-
T Consensus 165 ~~~~~~igD--s~~Di~-a-A~~aG~~~i~v 191 (222)
T PRK10826 165 PLTCVALED--SFNGMI-A-AKAARMRSIVV 191 (222)
T ss_pred HHHeEEEcC--ChhhHH-H-HHHcCCEEEEe
Confidence 5789999 889999 7 67888665543
No 60
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=97.86 E-value=7.4e-05 Score=72.07 Aligned_cols=88 Identities=16% Similarity=0.139 Sum_probs=68.1
Q ss_pred cCHHHHHH---HHhCC-cEEEEeCCcHHHHHHHHHhhCCCcE--EEeceEEEe-CeEEee-eeccCCC-cHHHHHHHHHH
Q 042170 147 VGLEIFEV---LKKGG-KTVAVSNMPQVMIDSFLRDYLDIDL--VVGRELKVF-CGYFVG-LMEDKKK-NILVLQEIIKQ 217 (543)
Q Consensus 147 l~~ea~~~---~~~~g-~~v~VSAsp~~~vepfak~~lG~d~--VlgTelev~-~G~~TG-~~~g~~~-g~~Kv~~l~~~ 217 (543)
+.|.+-|. +++.| +++++|.--+-|++|.+.+ ||+|. +-+.+|++. +|.|+| ...++-- +..|.+.|+..
T Consensus 89 lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~-Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggKa~~i~~l 167 (227)
T KOG1615|consen 89 LTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQ-LGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGKAEVIALL 167 (227)
T ss_pred cCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHH-hCCcHhhhhhheeeeccCCcccccccCCccccCCccHHHHHHH
Confidence 55555554 44677 8999999999999999876 99997 999999995 899999 5555544 45677777766
Q ss_pred hcCC---ceEEEeCCCCCcchhcc
Q 042170 218 ENSG---DVIGISSLNSSLDHYKL 238 (543)
Q Consensus 218 ~~~~---~~~aygD~~S~~D~~~m 238 (543)
-... .....|| ...|++ +
T Consensus 168 rk~~~~~~~~mvGD--GatDle-a 188 (227)
T KOG1615|consen 168 RKNYNYKTIVMVGD--GATDLE-A 188 (227)
T ss_pred HhCCChheeEEecC--Cccccc-c
Confidence 5432 4569999 999998 6
No 61
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=97.85 E-value=4.2e-05 Score=66.92 Aligned_cols=88 Identities=18% Similarity=0.139 Sum_probs=55.3
Q ss_pred HHHHHhCC-cEEEEeCCcHHHHHHHHHhhCCC----cEEEeceEEEeC-eEEeeeecc---CC-C-cHHHHHHHHHHhcC
Q 042170 152 FEVLKKGG-KTVAVSNMPQVMIDSFLRDYLDI----DLVVGRELKVFC-GYFVGLMED---KK-K-NILVLQEIIKQENS 220 (543)
Q Consensus 152 ~~~~~~~g-~~v~VSAsp~~~vepfak~~lG~----d~VlgTelev~~-G~~TG~~~g---~~-~-g~~Kv~~l~~~~~~ 220 (543)
++.+++.| .++++|++++.+++.+++. +|+ +.+++.+..... +.-.+.... .. . ..++.+.+.+.++.
T Consensus 33 l~~l~~~g~~i~ivS~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (139)
T cd01427 33 LKELKEKGIKLALATNKSRREVLELLEE-LGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPDKLLAALKLLGV 111 (139)
T ss_pred HHHHHHCCCeEEEEeCchHHHHHHHHHH-cCCchhhhheeccchhhhhcccccccccccccccCCCCHHHHHHHHHHcCC
Confidence 34445566 8899999999999999986 776 566665543211 100110000 00 1 25677777777664
Q ss_pred C--ceEEEeCCCCCcchhcccccccC
Q 042170 221 G--DVIGISSLNSSLDHYKLFLQQCN 244 (543)
Q Consensus 221 ~--~~~aygD~~S~~D~~~m~L~~~~ 244 (543)
. ..+.+|| +.+|.+ + .+.++
T Consensus 112 ~~~~~~~igD--~~~d~~-~-~~~~g 133 (139)
T cd01427 112 DPEEVLMVGD--SLNDIE-M-AKAAG 133 (139)
T ss_pred ChhhEEEeCC--CHHHHH-H-HHHcC
Confidence 3 6679999 899998 8 56643
No 62
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=97.79 E-value=0.00019 Score=70.03 Aligned_cols=91 Identities=16% Similarity=0.082 Sum_probs=56.1
Q ss_pred cCHHHHHHHH---hCC-cEEEEeCCcHHHHHHHHHhhCCCcEEEeceEEEeCeEEeeeeccCCC-cHHHHHHHHHHhcCC
Q 042170 147 VGLEIFEVLK---KGG-KTVAVSNMPQVMIDSFLRDYLDIDLVVGRELKVFCGYFVGLMEDKKK-NILVLQEIIKQENSG 221 (543)
Q Consensus 147 l~~ea~~~~~---~~g-~~v~VSAsp~~~vepfak~~lG~d~VlgTelev~~G~~TG~~~g~~~-g~~Kv~~l~~~~~~~ 221 (543)
+.|++.+.++ +.| +++++|+.++.+++.+++. +|++... +..+++.-.+... ..+=.+.+.+.++-.
T Consensus 94 ~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~-~~l~~~f-------~~~~~~~~~~~~kp~~~~~~~~~~~~~~~ 165 (226)
T PRK13222 94 LYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEA-LGIADYF-------SVVIGGDSLPNKKPDPAPLLLACEKLGLD 165 (226)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-cCCccCc-------cEEEcCCCCCCCCcChHHHHHHHHHcCCC
Confidence 5566666555 567 7889999999999999985 7875321 2223322111111 122234444444433
Q ss_pred --ceEEEeCCCCCcchhcccccccCceeec
Q 042170 222 --DVIGISSLNSSLDHYKLFLQQCNEVYLV 249 (543)
Q Consensus 222 --~~~aygD~~S~~D~~~m~L~~~~~~y~v 249 (543)
..+.+|| +..|.+ + ...|+-..+.
T Consensus 166 ~~~~i~igD--~~~Di~-~-a~~~g~~~i~ 191 (226)
T PRK13222 166 PEEMLFVGD--SRNDIQ-A-ARAAGCPSVG 191 (226)
T ss_pred hhheEEECC--CHHHHH-H-HHHCCCcEEE
Confidence 6789999 889999 8 6888875433
No 63
>COG2937 PlsB Glycerol-3-phosphate O-acyltransferase [Lipid metabolism]
Probab=97.79 E-value=3.9e-05 Score=85.57 Aligned_cols=175 Identities=18% Similarity=0.151 Sum_probs=111.8
Q ss_pred CCceEEEecCCCCCcHHHHHHhhcC-----ceeEEee--ehhhhhhhhhcCceeEeecCchHH-------HHHHHHHHhC
Q 042170 346 TERTLYVCNHRTLLDPLYLSFALKK-----NLTAVTY--SLSRMSEILAPIKTVRMTRNRDQD-------AKLVKSLLNQ 411 (543)
Q Consensus 346 ~~~~l~VaNH~S~LD~~vl~a~l~~-----~~~~va~--sl~~v~~~l~~i~tv~v~R~r~~~-------~~~~~~~L~~ 411 (543)
..+.+||.-|+|++|-+++..++-. |..+-.. ..+-++.++...|.+||.|+=+.. .+-+.+...+
T Consensus 295 gheiVyvpcHRShiDylLLsy~ly~ngLvPpHiaAGINLNf~p~G~i~RR~GAfFIRRsfKgn~LYs~VfrEYl~~Lf~r 374 (810)
T COG2937 295 GHEIVYVPCHRSHIDYLLLSYVLYHNGLVPPHIAAGINLNFWPMGPIFRRGGAFFIRRTFKGNPLYSTVFREYLGELFSR 374 (810)
T ss_pred CCceEEEecchhhhhHHHHHHHHHhcCCCcchhhccccccCccchHHHHhccceEEEeccCCChhHHHHHHHHHHHHHhC
Confidence 4589999999999999999998632 2222222 344567788889999999943222 3455677788
Q ss_pred C-CeEEecCccccCCCcccccchhhhhcC---------C--ceEEEEEEecccccccc---ccC-CcccccchhcccC--
Q 042170 412 G-DLVICPEGTTCREPYLLRFSPLFAEMS---------D--NIIPVASNSHVTMFYGT---TAG-GLKCLDPFFFLMN-- 473 (543)
Q Consensus 412 G-~l~iFPEGTtt~g~~Ll~F~~~fa~l~---------~--pV~PVaI~~~~~~~~gt---~~~-~~~~~d~~~~l~~-- 473 (543)
| ++--|=||++|+.+.|++-|.+.-... . -+|||-|-|.+-+=.++ ..+ +-|-=+.++.++.
T Consensus 375 gysleyfIEGGRSRTGrlL~PKtGmlsmtlqA~Lrg~~rpI~lvPvyIgYe~v~Ev~tYa~ElrGa~K~kE~~~~l~r~i 454 (810)
T COG2937 375 GYSLEYFIEGGRSRTGRLLPPKTGMLSMTLQAMLRGRTRPILLVPVYIGYEHVHEVGTYAKELRGATKEKESLRWLLRVI 454 (810)
T ss_pred CcceEEEeecCccccCCcCCCccchHHHHHHHHhcCCCCCeEEEeeEeehhhHhhHHHHHHHhcCCcCCcccHHHHHHHH
Confidence 8 799999999999999999987543322 1 58999999976221011 011 1222233333221
Q ss_pred C------CCeEEEEEcccccCCcc---------c------CCCC--CCHHHHHHHHHHHHHHHhCCCccC
Q 042170 474 P------SPGYTMQLLEGVSGLSM---------C------QDGN--ESRFDVANYVQSELGKALGFECTK 520 (543)
Q Consensus 474 P------~~~v~V~fL~pi~~~~~---------~------~~~~--~~~~elA~~vq~~Ia~~Lg~~~T~ 520 (543)
+ ...+-|.|+|||+-... . ..+| .+-..+|.+|+..|-++-.+.+|+
T Consensus 455 ~aqk~Rn~Gq~yVnFGEPi~L~qyL~~~~pew~~d~~~~~kp~w~~~tvn~ia~~V~~rIN~AaaVna~n 524 (810)
T COG2937 455 KAQKLRNLGQGYVNFGEPIPLRQYLNQHVPEWRQDPIEEEKPAWLTPTVNKIAFDVMVRINNAAAVNAMN 524 (810)
T ss_pred HHHhhhhcCcEEEeCCCCccHHHHhcccChhhhhCcccccCcccccHHHHHHHHHHHHHhhccccCCHHH
Confidence 1 34588999999974211 0 0011 134557888888887775555444
No 64
>PRK08419 lipid A biosynthesis lauroyl acyltransferase; Reviewed
Probab=97.69 E-value=0.00029 Score=72.78 Aligned_cols=135 Identities=16% Similarity=0.205 Sum_probs=84.5
Q ss_pred EEEEeccCCCCccccCcccccCCCceEEEecCCCCCcHHHHHHhh-cCceeEEeeeh--hhhhhhhh----cCceeEeec
Q 042170 324 RFTVITKPKTSRSFQNSRDCQKTERTLYVCNHRTLLDPLYLSFAL-KKNLTAVTYSL--SRMSEILA----PIKTVRMTR 396 (543)
Q Consensus 324 rv~v~G~~~~~~~~~~~~~~~~~~~~l~VaNH~S~LD~~vl~a~l-~~~~~~va~sl--~~v~~~l~----~i~tv~v~R 396 (543)
++++.|.+..... ..+++|+|++++|.+.+|........ ..++.++.+.. ..+.+++. ..|.-.+.
T Consensus 96 ~v~i~g~e~l~~a------~~~g~gvI~~t~H~GnwE~~~~~l~~~~~~~~~v~~~~~n~~~~~~~~~~R~~~g~~~i~- 168 (298)
T PRK08419 96 KVTFINEENLLDA------LKKKRPIIVTTAHYGYWELFSLALAAYYGAVSIVGRLLKSAPINEMISKRREQFGIELID- 168 (298)
T ss_pred cEEEECHHHHHHH------HHcCCCEEEEeeCccHHHHHHHHHHhcCCCeEEEEeCCCChHHHHHHHHHHHHcCCeeEE-
Confidence 5778888765411 01257999999999999998755443 34777777532 22223322 23333332
Q ss_pred CchHHHHHHHHHHhCCC-eEEecCccccCCC-ccccc-------chhhhhcC----CceEEEEEEeccccccccccCCcc
Q 042170 397 NRDQDAKLVKSLLNQGD-LVICPEGTTCREP-YLLRF-------SPLFAEMS----DNIIPVASNSHVTMFYGTTAGGLK 463 (543)
Q Consensus 397 ~r~~~~~~~~~~L~~G~-l~iFPEGTtt~g~-~Ll~F-------~~~fa~l~----~pV~PVaI~~~~~~~~gt~~~~~~ 463 (543)
..+..+++.+.|++|. ++++|.....++. ...+| ..+.+.++ .||+||.++...
T Consensus 169 -~~~~~r~~l~~Lk~g~~v~il~Dq~~~~~~gv~v~FfG~~a~~~~g~a~LA~k~~apvvpv~~~~~~------------ 235 (298)
T PRK08419 169 -KKGAMKELLKALKQGRALGILVDQNVVPKEGVEVKFFNKRVTHTTIASILARRYNALIIPVFIFNDD------------ 235 (298)
T ss_pred -CccHHHHHHHHHHcCCeEEEEecCCCCCCCCeEEecCCCCcccchhHHHHHHHHCCCEEEEEEEECC------------
Confidence 2346788889999997 7899965544333 33444 33555444 499999995321
Q ss_pred cccchhcccCCCCeEEEEEcccccCC
Q 042170 464 CLDPFFFLMNPSPGYTMQLLEGVSGL 489 (543)
Q Consensus 464 ~~d~~~~l~~P~~~v~V~fL~pi~~~ 489 (543)
...|+|+|.+|++.+
T Consensus 236 -----------~~~~~i~~~~~i~~~ 250 (298)
T PRK08419 236 -----------YSHFTITFFPPIRSK 250 (298)
T ss_pred -----------CCeEEEEEcCCccCC
Confidence 114899999998753
No 65
>KOG3729 consensus Mitochondrial glycerol-3-phosphate acyltransferase GPAT [Lipid transport and metabolism]
Probab=97.58 E-value=0.00016 Score=78.48 Aligned_cols=143 Identities=17% Similarity=0.188 Sum_probs=92.4
Q ss_pred CCceEEEecCCCCCcHHHHHHhh---cCceeEEee----ehhhhhhhhhcCceeEeec--C----chHHH-------HHH
Q 042170 346 TERTLYVCNHRTLLDPLYLSFAL---KKNLTAVTY----SLSRMSEILAPIKTVRMTR--N----RDQDA-------KLV 405 (543)
Q Consensus 346 ~~~~l~VaNH~S~LD~~vl~a~l---~~~~~~va~----sl~~v~~~l~~i~tv~v~R--~----r~~~~-------~~~ 405 (543)
.-|.||+.=|+|.+|-+.+.-++ +-..+.+|- .++-.+.++..+|++||.| | .++|+ .-+
T Consensus 157 g~PliFlPlHRSHlDYlliTwIL~~~~Ik~P~iAsGNNLnIP~Fg~Llr~LGaFFIrRriDp~~~G~KDVLYRA~LH~yi 236 (715)
T KOG3729|consen 157 GIPMVFLPLHRSHLDYLLITWILWHFGIKLPHIASGNNLNIPGFGWLLRALGAFFIRRRVDPDDEGGKDVLYRAILHSYI 236 (715)
T ss_pred CCceEEEecchhhhhHHHHHHHHHhcCcCCceeccCCccccchHHHHHHhcchheeeeccCCCcccchhHHHHHHHHHHH
Confidence 35999999999999999998886 112233332 2344566788899999988 1 23342 234
Q ss_pred HHHHhCCC-eEEecCccccCCCcccccchhhhhc-----C------CceEEEEEEeccc---cccccccCCcccccchhc
Q 042170 406 KSLLNQGD-LVICPEGTTCREPYLLRFSPLFAEM-----S------DNIIPVASNSHVT---MFYGTTAGGLKCLDPFFF 470 (543)
Q Consensus 406 ~~~L~~G~-l~iFPEGTtt~g~~Ll~F~~~fa~l-----~------~pV~PVaI~~~~~---~~~gt~~~~~~~~d~~~~ 470 (543)
.+.|++|. +=+|=|||+||.+.-..-+.+.-+. . .-++||.+.|.|- .|.+...+-.|--+++|.
T Consensus 237 ~~~L~Q~~~iEfFlEGtRsR~GK~~~pk~GlLSVvV~a~~~g~IPD~LlvPVs~~YdRiveG~f~~EQ~G~pK~~ES~~~ 316 (715)
T KOG3729|consen 237 EQVLSQDMPIEFFLEGTRSRFGKALTPKNGLLSVVVEAVQHGFIPDCLLVPVSYTYDRVVEGIFLHEQMGIPKVRESVLG 316 (715)
T ss_pred HHHHhCCCceEEEEeccccccCCcCCcccccHHHHHHHHhcCCCCceEEEeeeccHHHHhhhhhhHHhcCCCCccHHHHH
Confidence 68899996 8999999999966433334332211 1 1599999999873 244444333344455553
Q ss_pred --------ccCCCCeEEEEEcccccC
Q 042170 471 --------LMNPSPGYTMQLLEGVSG 488 (543)
Q Consensus 471 --------l~~P~~~v~V~fL~pi~~ 488 (543)
+-.-...++|.|.+|++-
T Consensus 317 v~rGi~~~L~kNYG~vR~DF~~P~Sl 342 (715)
T KOG3729|consen 317 VFRGIFSGLSKNYGVVRMDFGRPISL 342 (715)
T ss_pred HHHHHHHHHhhcCCeEEEecCCCccH
Confidence 112344588888888764
No 66
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=97.52 E-value=0.0016 Score=64.45 Aligned_cols=90 Identities=14% Similarity=0.072 Sum_probs=55.0
Q ss_pred cCHHHHHHH---HhCC-cEEEEeCCcHHHHHHHHHhhCCCcEEEeceEEEeCeEEeeeeccCCC-cHHHHHHHHHHhcCC
Q 042170 147 VGLEIFEVL---KKGG-KTVAVSNMPQVMIDSFLRDYLDIDLVVGRELKVFCGYFVGLMEDKKK-NILVLQEIIKQENSG 221 (543)
Q Consensus 147 l~~ea~~~~---~~~g-~~v~VSAsp~~~vepfak~~lG~d~VlgTelev~~G~~TG~~~g~~~-g~~Kv~~l~~~~~~~ 221 (543)
+.|.+.+.+ ++.| +..++|++++.+++-+++. +|++... +-.+++.-.+... .++-...+.+.++-.
T Consensus 96 ~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~-~~l~~~f-------~~i~~~~~~~~~KP~p~~~~~~~~~l~~~ 167 (229)
T PRK13226 96 LFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQ-LGWEQRC-------AVLIGGDTLAERKPHPLPLLVAAERIGVA 167 (229)
T ss_pred eCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCchhcc-------cEEEecCcCCCCCCCHHHHHHHHHHhCCC
Confidence 456555544 4677 7778999999999888875 7765322 1112221111111 245566666666543
Q ss_pred --ceEEEeCCCCCcchhcccccccCceee
Q 042170 222 --DVIGISSLNSSLDHYKLFLQQCNEVYL 248 (543)
Q Consensus 222 --~~~aygD~~S~~D~~~m~L~~~~~~y~ 248 (543)
..+.+|| |..|.. + -..+|-..+
T Consensus 168 p~~~l~IGD--s~~Di~-a-A~~aG~~~i 192 (229)
T PRK13226 168 PTDCVYVGD--DERDIL-A-ARAAGMPSV 192 (229)
T ss_pred hhhEEEeCC--CHHHHH-H-HHHCCCcEE
Confidence 6789999 889988 7 566776543
No 67
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=97.52 E-value=0.0012 Score=67.35 Aligned_cols=87 Identities=18% Similarity=0.179 Sum_probs=53.7
Q ss_pred cCHHHHHHHH---hCC-cEEEEeCCcHHHHHHHHHhhCCCcEEEeceEEEeCeEEeeeeccCCC-cHHHHHHHHHHhcCC
Q 042170 147 VGLEIFEVLK---KGG-KTVAVSNMPQVMIDSFLRDYLDIDLVVGRELKVFCGYFVGLMEDKKK-NILVLQEIIKQENSG 221 (543)
Q Consensus 147 l~~ea~~~~~---~~g-~~v~VSAsp~~~vepfak~~lG~d~VlgTelev~~G~~TG~~~g~~~-g~~Kv~~l~~~~~~~ 221 (543)
+.|.+.+.++ +.| +++++|.+++.++++.+++ +|++... +..+++.-.+... ..+-.+.+.+.++-.
T Consensus 102 ~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~-~~i~~~f-------~~i~~~d~~~~~Kp~p~~~~~~~~~~g~~ 173 (272)
T PRK13223 102 VYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQ-MKIGRYF-------RWIIGGDTLPQKKPDPAALLFVMKMAGVP 173 (272)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHH-cCcHhhC-------eEEEecCCCCCCCCCcHHHHHHHHHhCCC
Confidence 4566666555 567 8889999999999998875 7875321 2223322111111 133344444444432
Q ss_pred --ceEEEeCCCCCcchhcccccccCc
Q 042170 222 --DVIGISSLNSSLDHYKLFLQQCNE 245 (543)
Q Consensus 222 --~~~aygD~~S~~D~~~m~L~~~~~ 245 (543)
..+.+|| +..|.+ + ...++-
T Consensus 174 ~~~~l~IGD--~~~Di~-a-A~~aGi 195 (272)
T PRK13223 174 PSQSLFVGD--SRSDVL-A-AKAAGV 195 (272)
T ss_pred hhHEEEECC--CHHHHH-H-HHHCCC
Confidence 6789999 899998 7 566664
No 68
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=97.42 E-value=0.0043 Score=60.41 Aligned_cols=87 Identities=13% Similarity=0.044 Sum_probs=52.8
Q ss_pred cCHHHHHHHH---hCC-cEEEEeCCcHHHHHHHHHhhCCCcEEEeceEEEeCeEEeeeeccCCC-cHHHHHHHHHHhcCC
Q 042170 147 VGLEIFEVLK---KGG-KTVAVSNMPQVMIDSFLRDYLDIDLVVGRELKVFCGYFVGLMEDKKK-NILVLQEIIKQENSG 221 (543)
Q Consensus 147 l~~ea~~~~~---~~g-~~v~VSAsp~~~vepfak~~lG~d~VlgTelev~~G~~TG~~~g~~~-g~~Kv~~l~~~~~~~ 221 (543)
+.|++.+.++ +.| ++++||.++...++..++. +|++.. .+..+++--.+... .++-...+.+.++-.
T Consensus 95 ~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~-~~l~~~-------f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~ 166 (221)
T TIGR02253 95 VYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLER-LGVRDF-------FDAVITSEEEGVEKPHPKIFYAALKRLGVK 166 (221)
T ss_pred CCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHh-CChHHh-------ccEEEEeccCCCCCCCHHHHHHHHHHcCCC
Confidence 5566555444 667 7889999998888888875 786532 12333332222222 244555555555533
Q ss_pred --ceEEEeCCCCC-cchhcccccccCc
Q 042170 222 --DVIGISSLNSS-LDHYKLFLQQCNE 245 (543)
Q Consensus 222 --~~~aygD~~S~-~D~~~m~L~~~~~ 245 (543)
..+.+|| |. .|.. . -..+|-
T Consensus 167 ~~~~~~igD--s~~~di~-~-A~~aG~ 189 (221)
T TIGR02253 167 PEEAVMVGD--RLDKDIK-G-AKNLGM 189 (221)
T ss_pred hhhEEEECC--ChHHHHH-H-HHHCCC
Confidence 5789999 86 6876 5 344553
No 69
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=97.31 E-value=0.0028 Score=62.50 Aligned_cols=163 Identities=18% Similarity=0.128 Sum_probs=87.4
Q ss_pred CeEEEEEcCCccccCCCchHHHHHHHHhhcchHH---HHHHHHHHHHHHhcccchhHHHHHHHHhcC--ccc--chhHHH
Q 042170 63 ERTLIFNVEGFLLKSSSLFPYFMLVAFEAGGLIR---AFLLFILYPLICLAGEEMGLKIMVMVSFFW--VKK--DNFRVG 135 (543)
Q Consensus 63 ~~~a~FD~DGTLl~~~s~fp~f~~~a~~~~~~~r---~~~ll~~~p~~~~l~~~~~~k~~~~~~f~G--~~~--~~~~va 135 (543)
.++.+||+||||+.+...+..-+..++..-|+.. ..+.. . .+ ...+.++...... ... +.++..
T Consensus 4 ~~~iiFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~----~---ig--~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (220)
T COG0546 4 IKAILFDLDGTLVDSAEDILRAFNAALAELGLPPLDEEEIRQ----L---IG--LGLDELIERLLGEADEEAAAELVERL 74 (220)
T ss_pred CCEEEEeCCCccccChHHHHHHHHHHHHHcCCCCCCHHHHHH----H---hc--CCHHHHHHHHhccccchhHHHHHHHH
Confidence 4689999999999886555443333444433321 11110 0 11 1222222222221 111 112223
Q ss_pred HhhchhhHHHh----cCHHHHH---HHHhCC-cEEEEeCCcHHHHHHHHHhhCCCcEEEeceEEEeCeEEeeeeccCCC-
Q 042170 136 RAVLPKFFLEN----VGLEIFE---VLKKGG-KTVAVSNMPQVMIDSFLRDYLDIDLVVGRELKVFCGYFVGLMEDKKK- 206 (543)
Q Consensus 136 ~avlpk~~~e~----l~~ea~~---~~~~~g-~~v~VSAsp~~~vepfak~~lG~d~VlgTelev~~G~~TG~~~g~~~- 206 (543)
+..+-+.+.+. ..|.+.+ .+++.| +..+||+-++.-++.+++. +|++... +..++|.-.....
T Consensus 75 ~~~~~~~~~~~~~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~-~gl~~~F-------~~i~g~~~~~~~KP 146 (220)
T COG0546 75 REEFLTAYAELLESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKA-LGLADYF-------DVIVGGDDVPPPKP 146 (220)
T ss_pred HHHHHHHHHhhccCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHH-hCCcccc-------ceEEcCCCCCCCCc
Confidence 33333343443 3454444 445778 8889999999999999986 7876322 2222211111111
Q ss_pred cHHHHHHHHHHhcCC--ceEEEeCCCCCcchhcccccccCce
Q 042170 207 NILVLQEIIKQENSG--DVIGISSLNSSLDHYKLFLQQCNEV 246 (543)
Q Consensus 207 g~~Kv~~l~~~~~~~--~~~aygD~~S~~D~~~m~L~~~~~~ 246 (543)
.++-+..+.+.++.+ ..+..|| |..|.. + -+-|+-+
T Consensus 147 ~P~~l~~~~~~~~~~~~~~l~VGD--s~~Di~-a-A~~Ag~~ 184 (220)
T COG0546 147 DPEPLLLLLEKLGLDPEEALMVGD--SLNDIL-A-AKAAGVP 184 (220)
T ss_pred CHHHHHHHHHHhCCChhheEEECC--CHHHHH-H-HHHcCCC
Confidence 356666666666644 5689999 999998 7 5667633
No 70
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=97.30 E-value=0.0025 Score=60.08 Aligned_cols=74 Identities=16% Similarity=0.057 Sum_probs=43.5
Q ss_pred cCHHHHHHHH---hCC-cEEEEeCCcHHHHHHHHHhhCCCc----EEEeceEEEeCeEEeeeeccCCC-cHHHHHHHHHH
Q 042170 147 VGLEIFEVLK---KGG-KTVAVSNMPQVMIDSFLRDYLDID----LVVGRELKVFCGYFVGLMEDKKK-NILVLQEIIKQ 217 (543)
Q Consensus 147 l~~ea~~~~~---~~g-~~v~VSAsp~~~vepfak~~lG~d----~VlgTelev~~G~~TG~~~g~~~-g~~Kv~~l~~~ 217 (543)
+.|++.+.++ +.| +++++|++ .+++..++. +|++ .+++.+ ..+... .++-..++.+.
T Consensus 89 ~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~-~~l~~~f~~v~~~~-----------~~~~~kp~~~~~~~~~~~ 154 (185)
T TIGR02009 89 VLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAK-LGLTDYFDAIVDAD-----------EVKEGKPHPETFLLAAEL 154 (185)
T ss_pred CCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHH-cChHHHCCEeeehh-----------hCCCCCCChHHHHHHHHH
Confidence 5566666554 667 77788877 567888875 7754 444322 111111 23344445555
Q ss_pred hcCC--ceEEEeCCCCCcchh
Q 042170 218 ENSG--DVIGISSLNSSLDHY 236 (543)
Q Consensus 218 ~~~~--~~~aygD~~S~~D~~ 236 (543)
++-. ..+..|| |..|..
T Consensus 155 ~~~~~~~~v~IgD--~~~di~ 173 (185)
T TIGR02009 155 LGVSPNECVVFED--ALAGVQ 173 (185)
T ss_pred cCCCHHHeEEEeC--cHhhHH
Confidence 4433 5678999 888887
No 71
>KOG3730 consensus Acyl-CoA:dihydroxyactetone-phosphate acyltransferase DHAPAT [Lipid transport and metabolism]
Probab=97.29 E-value=0.00042 Score=74.29 Aligned_cols=106 Identities=25% Similarity=0.320 Sum_probs=76.1
Q ss_pred CCceEEEecCCCCCcHHHHHHhh---cCceeEEe-----eehhhhhhhhhcCceeEeecCchHH-------HHHHHHHHh
Q 042170 346 TERTLYVCNHRTLLDPLYLSFAL---KKNLTAVT-----YSLSRMSEILAPIKTVRMTRNRDQD-------AKLVKSLLN 410 (543)
Q Consensus 346 ~~~~l~VaNH~S~LD~~vl~a~l---~~~~~~va-----~sl~~v~~~l~~i~tv~v~R~r~~~-------~~~~~~~L~ 410 (543)
.-|+++...|+||+|-+.++..+ +-+++.+| -++.-++++++.-|.+|..|+=..| .+-+...+.
T Consensus 149 k~pV~~lPSHrsY~DFlllS~icy~YDi~iP~IAAGmDF~sMk~mg~~LR~sGAFFMRRsFg~d~LYWaVFsEYv~t~v~ 228 (685)
T KOG3730|consen 149 KCPVLYLPSHRSYMDFLLLSYICYYYDIEIPGIAAGMDFHSMKGMGTMLRKSGAFFMRRSFGNDELYWAVFSEYVYTLVA 228 (685)
T ss_pred cCCEEEeccchhHHHHHHHHHHHHhccCCCchhhcccchHhhhHHHHHHHhcccceeeeccCCceehHHHHHHHHHHHHh
Confidence 45999999999999999998874 34455554 2566678889989999998832222 467788889
Q ss_pred CCC--eEEecCccccCCC-cccccchhhhh---------cCC-ceEEEEEEecc
Q 042170 411 QGD--LVICPEGTTCREP-YLLRFSPLFAE---------MSD-NIIPVASNSHV 451 (543)
Q Consensus 411 ~G~--l~iFPEGTtt~g~-~Ll~F~~~fa~---------l~~-pV~PVaI~~~~ 451 (543)
+++ |-+|=|||++|.. .|.|=-.+... .-+ -|+||.|.|.+
T Consensus 229 N~~~~VEFFiEgTRSR~~K~L~PK~GlL~mvlePyf~geV~Dv~iVPVSv~Ydk 282 (685)
T KOG3730|consen 229 NYHIGVEFFIEGTRSRNFKALVPKIGLLSMVLEPYFTGEVPDVMIVPVSVAYDK 282 (685)
T ss_pred cCCCceEEEEeecccccccccCcchhhHHHHHhhhhcCCcCceEEEEeeecHHH
Confidence 995 7799999999976 44332222211 112 69999999976
No 72
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=97.29 E-value=0.0031 Score=59.79 Aligned_cols=74 Identities=9% Similarity=0.099 Sum_probs=44.0
Q ss_pred HHHHHHHhCCcEEEEeCCcHHHHHHHHHhhCCCc----EEEeceEEEeCeEEeeeeccCCCcHHHHHHHHHHhcCC--ce
Q 042170 150 EIFEVLKKGGKTVAVSNMPQVMIDSFLRDYLDID----LVVGRELKVFCGYFVGLMEDKKKNILVLQEIIKQENSG--DV 223 (543)
Q Consensus 150 ea~~~~~~~g~~v~VSAsp~~~vepfak~~lG~d----~VlgTelev~~G~~TG~~~g~~~g~~Kv~~l~~~~~~~--~~ 223 (543)
+.++.+++..+..++|++++..++-+++. +|++ .|++.+ + ++. .+. .++=..++.+.++-. ..
T Consensus 94 e~L~~L~~~~~l~I~T~~~~~~~~~~l~~-~~l~~~fd~i~~~~-~------~~~--~KP-~p~~~~~~~~~~~~~~~~~ 162 (188)
T PRK10725 94 EVVKAWHGRRPMAVGTGSESAIAEALLAH-LGLRRYFDAVVAAD-D------VQH--HKP-APDTFLRCAQLMGVQPTQC 162 (188)
T ss_pred HHHHHHHhCCCEEEEcCCchHHHHHHHHh-CCcHhHceEEEehh-h------ccC--CCC-ChHHHHHHHHHcCCCHHHe
Confidence 33344444457788999999999999886 7864 333322 0 111 111 234445555555533 57
Q ss_pred EEEeCCCCCcchh
Q 042170 224 IGISSLNSSLDHY 236 (543)
Q Consensus 224 ~aygD~~S~~D~~ 236 (543)
+.+|| |..|..
T Consensus 163 l~igD--s~~di~ 173 (188)
T PRK10725 163 VVFED--ADFGIQ 173 (188)
T ss_pred EEEec--cHhhHH
Confidence 78999 888876
No 73
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=97.28 E-value=0.0038 Score=60.15 Aligned_cols=78 Identities=13% Similarity=0.012 Sum_probs=47.3
Q ss_pred HHHHHHHHhCC-cEEEEeCCcHHHHHHHHHhhCCCcEEEeceEEEeCeEEeeeeccCCCcHHHHHHHHHHhcCC--ceEE
Q 042170 149 LEIFEVLKKGG-KTVAVSNMPQVMIDSFLRDYLDIDLVVGRELKVFCGYFVGLMEDKKKNILVLQEIIKQENSG--DVIG 225 (543)
Q Consensus 149 ~ea~~~~~~~g-~~v~VSAsp~~~vepfak~~lG~d~VlgTelev~~G~~TG~~~g~~~g~~Kv~~l~~~~~~~--~~~a 225 (543)
.+.++.+++.| +..++|+.++.+++..++. +|++... +..+++.-....-.++-...+.+..+-. ..+-
T Consensus 112 ~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~-~gl~~~f-------~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~i~ 183 (197)
T TIGR01548 112 KGLLRELHRAPKGMAVVTGRPRKDAAKFLTT-HGLEILF-------PVQIWMEDCPPKPNPEPLILAAKALGVEACHAAM 183 (197)
T ss_pred HHHHHHHHHcCCcEEEECCCCHHHHHHHHHH-cCchhhC-------CEEEeecCCCCCcCHHHHHHHHHHhCcCcccEEE
Confidence 56777777778 8889999999999999986 7876433 2222221111100222233333333422 5688
Q ss_pred EeCCCCCcchh
Q 042170 226 ISSLNSSLDHY 236 (543)
Q Consensus 226 ygD~~S~~D~~ 236 (543)
+|| +..|..
T Consensus 184 vGD--~~~Di~ 192 (197)
T TIGR01548 184 VGD--TVDDII 192 (197)
T ss_pred EeC--CHHHHH
Confidence 999 777754
No 74
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=97.25 E-value=0.002 Score=60.41 Aligned_cols=79 Identities=13% Similarity=0.074 Sum_probs=46.2
Q ss_pred cCHHHHHHHH---hCC-cEEEEeCCcHHHHHHHHHhhCCCcEEEeceEEEeCeEEeeeeccCCC-cHHHHHHHHHHhcCC
Q 042170 147 VGLEIFEVLK---KGG-KTVAVSNMPQVMIDSFLRDYLDIDLVVGRELKVFCGYFVGLMEDKKK-NILVLQEIIKQENSG 221 (543)
Q Consensus 147 l~~ea~~~~~---~~g-~~v~VSAsp~~~vepfak~~lG~d~VlgTelev~~G~~TG~~~g~~~-g~~Kv~~l~~~~~~~ 221 (543)
+.|.+.+.++ +.| +++++|+++... +...++ +|++. ..+..+++.-.+... .++-.+++.+.++-.
T Consensus 86 ~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~-~~l~~-------~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~ 156 (183)
T TIGR01509 86 PLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQE-LGLRD-------LFDVVIFSGDVGRGKPDPDIYLLALKKLGLK 156 (183)
T ss_pred cCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHh-cCCHH-------HCCEEEEcCCCCCCCCCHHHHHHHHHHcCCC
Confidence 4566665444 667 788999999888 665553 67542 112223332222222 345556666665533
Q ss_pred --ceEEEeCCCCCcchh
Q 042170 222 --DVIGISSLNSSLDHY 236 (543)
Q Consensus 222 --~~~aygD~~S~~D~~ 236 (543)
..+.+|| +..|..
T Consensus 157 ~~~~~~vgD--~~~di~ 171 (183)
T TIGR01509 157 PEECLFVDD--SPAGIE 171 (183)
T ss_pred cceEEEEcC--CHHHHH
Confidence 6678999 777765
No 75
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=97.21 E-value=0.009 Score=60.05 Aligned_cols=153 Identities=13% Similarity=0.136 Sum_probs=84.9
Q ss_pred EEEEEcCCccccCCCchHHHHHHHHhhcchHHHHHHHHHHH-HHHhcccchhHHHHHHHHhcCcccchhH-HHHhhchhh
Q 042170 65 TLIFNVEGFLLKSSSLFPYFMLVAFEAGGLIRAFLLFILYP-LICLAGEEMGLKIMVMVSFFWVKKDNFR-VGRAVLPKF 142 (543)
Q Consensus 65 ~a~FD~DGTLl~~~s~fp~f~~~a~~~~~~~r~~~ll~~~p-~~~~l~~~~~~k~~~~~~f~G~~~~~~~-va~avlpk~ 142 (543)
+++||||+||+..||-- + +.-.+..+.....+... ++ --| .+..-+.+-...-.|.+.++++ .-+. +|
T Consensus 2 LvvfDFD~TIvd~dsd~-~-v~~~l~~~~~~~~l~~~--~~~~~w---t~~m~~vl~~L~~~gvt~~~I~~~l~~-ip-- 71 (234)
T PF06888_consen 2 LVVFDFDHTIVDQDSDD-W-VIELLPPEELPEELRES--YPKGGW---TEYMDRVLQLLHEQGVTPEDIRDALRS-IP-- 71 (234)
T ss_pred EEEEeCCCCccCCccHH-H-HHHhcCCcccHHHHHHh--ccccch---HHHHHHHHHHHHHcCCCHHHHHHHHHc-CC--
Confidence 68999999999887633 2 33344444333332221 11 001 1111222222222388888887 4443 22
Q ss_pred HHHhcCHHHH---HHHH--hCC-cEEEEeCCcHHHHHHHHHhhCCCc----EEEeceEEEe-CeEEe-eee-------cc
Q 042170 143 FLENVGLEIF---EVLK--KGG-KTVAVSNMPQVMIDSFLRDYLDID----LVVGRELKVF-CGYFV-GLM-------ED 203 (543)
Q Consensus 143 ~~e~l~~ea~---~~~~--~~g-~~v~VSAsp~~~vepfak~~lG~d----~VlgTelev~-~G~~T-G~~-------~g 203 (543)
+.|.+. +.++ +.| .+++||-+-.+.+|.|++. .|+. .|......+. +|+++ .-. ++
T Consensus 72 ----~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~-~gl~~~f~~I~TNpa~~~~~G~l~v~pyh~h~C~~C~ 146 (234)
T PF06888_consen 72 ----IDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEH-HGLRDCFSEIFTNPACFDADGRLRVRPYHSHGCSLCP 146 (234)
T ss_pred ----CCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHh-CCCccccceEEeCCceecCCceEEEeCccCCCCCcCC
Confidence 333333 3442 346 8899999999999999986 5764 5677777775 57653 111 22
Q ss_pred CCCcHHHHHHHHHHhcC------C--ceEEEeCCCCCcchh
Q 042170 204 KKKNILVLQEIIKQENS------G--DVIGISSLNSSLDHY 236 (543)
Q Consensus 204 ~~~g~~Kv~~l~~~~~~------~--~~~aygD~~S~~D~~ 236 (543)
.| -=|-..|+++..+ . ..+-.|| +.+|.-
T Consensus 147 ~N--mCK~~il~~~~~~~~~~g~~~~rviYiGD--G~nD~C 183 (234)
T PF06888_consen 147 PN--MCKGKILERLLQEQAQRGVPYDRVIYIGD--GRNDFC 183 (234)
T ss_pred Cc--cchHHHHHHHHHHHhhcCCCcceEEEECC--CCCCcC
Confidence 33 1244444444322 1 3457799 999983
No 76
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=97.20 E-value=0.0039 Score=60.67 Aligned_cols=90 Identities=12% Similarity=0.017 Sum_probs=55.0
Q ss_pred cCHHHHHHHH---hCC-cEEEEeCCcHHHHHHHHHhhCCCcEEEeceEEEeCeEEeeeeccCCC-cHHHHHHHHHHhcCC
Q 042170 147 VGLEIFEVLK---KGG-KTVAVSNMPQVMIDSFLRDYLDIDLVVGRELKVFCGYFVGLMEDKKK-NILVLQEIIKQENSG 221 (543)
Q Consensus 147 l~~ea~~~~~---~~g-~~v~VSAsp~~~vepfak~~lG~d~VlgTelev~~G~~TG~~~g~~~-g~~Kv~~l~~~~~~~ 221 (543)
+.|.+.+.++ +.| +++++|++++..++..++. +|++... +..+++.-.+... .++-..++.+.++-.
T Consensus 83 ~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~-~gl~~~f-------~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~ 154 (214)
T PRK13288 83 EYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKL-TGLDEFF-------DVVITLDDVEHAKPDPEPVLKALELLGAK 154 (214)
T ss_pred cCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-cCChhce-------eEEEecCcCCCCCCCcHHHHHHHHHcCCC
Confidence 4455555444 677 7889999999999999885 7876422 1122221111111 244555555555533
Q ss_pred --ceEEEeCCCCCcchhcccccccCceee
Q 042170 222 --DVIGISSLNSSLDHYKLFLQQCNEVYL 248 (543)
Q Consensus 222 --~~~aygD~~S~~D~~~m~L~~~~~~y~ 248 (543)
..+..|| |..|.. . -..+|-..+
T Consensus 155 ~~~~~~iGD--s~~Di~-a-a~~aG~~~i 179 (214)
T PRK13288 155 PEEALMVGD--NHHDIL-A-GKNAGTKTA 179 (214)
T ss_pred HHHEEEECC--CHHHHH-H-HHHCCCeEE
Confidence 5678999 889998 6 456665543
No 77
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=97.19 E-value=0.0068 Score=60.70 Aligned_cols=87 Identities=8% Similarity=-0.072 Sum_probs=48.4
Q ss_pred cCHHHHHHHH---hCC-cEEEEeCCcHHHHHHHHHhhCCCcEEEeceEEEeCeEEeeeeccCCC-cHHHHHHHHHHhcC-
Q 042170 147 VGLEIFEVLK---KGG-KTVAVSNMPQVMIDSFLRDYLDIDLVVGRELKVFCGYFVGLMEDKKK-NILVLQEIIKQENS- 220 (543)
Q Consensus 147 l~~ea~~~~~---~~g-~~v~VSAsp~~~vepfak~~lG~d~VlgTelev~~G~~TG~~~g~~~-g~~Kv~~l~~~~~~- 220 (543)
+.|.+.+.++ +.| +..++|++++..++.+++. +|++... .+..+++.-.+... .++-...+.+.++-
T Consensus 100 ~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~-~gl~~~f------~d~ii~~~~~~~~KP~p~~~~~a~~~l~~~ 172 (253)
T TIGR01422 100 PIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPE-AALQGYR------PDYNVTTDDVPAGRPAPWMALKNAIELGVY 172 (253)
T ss_pred cCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHH-HHhcCCC------CceEEccccCCCCCCCHHHHHHHHHHcCCC
Confidence 4555555444 667 8889999999999998875 5544221 01222221111111 23333333334442
Q ss_pred -C-ceEEEeCCCCCcchhcccccccC
Q 042170 221 -G-DVIGISSLNSSLDHYKLFLQQCN 244 (543)
Q Consensus 221 -~-~~~aygD~~S~~D~~~m~L~~~~ 244 (543)
. ..+.+|| |..|.. . -..+|
T Consensus 173 ~~~~~l~IGD--s~~Di~-a-A~~aG 194 (253)
T TIGR01422 173 DVAACVKVGD--TVPDIE-E-GRNAG 194 (253)
T ss_pred CchheEEECC--cHHHHH-H-HHHCC
Confidence 2 5789999 888886 4 33455
No 78
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=97.18 E-value=0.0023 Score=64.33 Aligned_cols=89 Identities=12% Similarity=0.067 Sum_probs=52.8
Q ss_pred cCHHHHH---HHHhCC-cEEEEeCCcHHHHHHHHHhhCCCcEEEeceEEEeCeEEeeeeccCCC-cHHHHHHHHHHhcCC
Q 042170 147 VGLEIFE---VLKKGG-KTVAVSNMPQVMIDSFLRDYLDIDLVVGRELKVFCGYFVGLMEDKKK-NILVLQEIIKQENSG 221 (543)
Q Consensus 147 l~~ea~~---~~~~~g-~~v~VSAsp~~~vepfak~~lG~d~VlgTelev~~G~~TG~~~g~~~-g~~Kv~~l~~~~~~~ 221 (543)
+.|.+.+ .+++.| +..++|++++.+++..++. +|++.. .+..+++.-.+... .++-...+.+.++-.
T Consensus 109 l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~-~gl~~~-------Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~~ 180 (248)
T PLN02770 109 PLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISL-LGLSDF-------FQAVIIGSECEHAKPHPDPYLKALEVLKVS 180 (248)
T ss_pred cCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHH-cCChhh-------CcEEEecCcCCCCCCChHHHHHHHHHhCCC
Confidence 3445555 444677 8889999999999999986 786421 12233333222122 234444445555533
Q ss_pred --ceEEEeCCCCCcchhcccccccCcee
Q 042170 222 --DVIGISSLNSSLDHYKLFLQQCNEVY 247 (543)
Q Consensus 222 --~~~aygD~~S~~D~~~m~L~~~~~~y 247 (543)
..+..|| |..|.. . -..++-..
T Consensus 181 ~~~~l~vgD--s~~Di~-a-A~~aGi~~ 204 (248)
T PLN02770 181 KDHTFVFED--SVSGIK-A-GVAAGMPV 204 (248)
T ss_pred hhHEEEEcC--CHHHHH-H-HHHCCCEE
Confidence 5788999 888886 4 33455443
No 79
>PRK07920 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=97.13 E-value=0.0065 Score=62.91 Aligned_cols=155 Identities=11% Similarity=0.071 Sum_probs=93.9
Q ss_pred EEEE--eccCCCCccccCcccccCCCceEEEecCCCCCcHHHHHHhh-cCceeEEeeeh--hhhhhh----hhcCceeEe
Q 042170 324 RFTV--ITKPKTSRSFQNSRDCQKTERTLYVCNHRTLLDPLYLSFAL-KKNLTAVTYSL--SRMSEI----LAPIKTVRM 394 (543)
Q Consensus 324 rv~v--~G~~~~~~~~~~~~~~~~~~~~l~VaNH~S~LD~~vl~a~l-~~~~~~va~sl--~~v~~~----l~~i~tv~v 394 (543)
++++ .|.+..... ...++|+|+++.|.+.+|........ +.++.++.+.. ..+.++ ....|.-.+
T Consensus 89 ~v~i~~~g~e~l~~a------~~~gkgvIllt~H~GnwE~~~~~l~~~~~~~~~vyr~~~n~~~~~~~~~~R~~~g~~~i 162 (298)
T PRK07920 89 RVRVSIEGLEHLDAA------LAAGRGVVLALPHSGNWDMAGAWLVQHHGPFTTVAERLKPESLYERFVAYRESLGFEVL 162 (298)
T ss_pred hhhhccCCHHHHHHH------HhcCCCeEEEecCCCHHHHHHHHHHHcCCCeEEEEeccCCHHHHHHHHHHHHhcCCEEE
Confidence 4566 777664310 01247999999999999997644433 46777776532 112222 223343334
Q ss_pred ecCc--hHHHHHHHHHHhCCC-eEEecCccccCCCccccc-------chhhhhcC----CceEEEEEEeccccccccccC
Q 042170 395 TRNR--DQDAKLVKSLLNQGD-LVICPEGTTCREPYLLRF-------SPLFAEMS----DNIIPVASNSHVTMFYGTTAG 460 (543)
Q Consensus 395 ~R~r--~~~~~~~~~~L~~G~-l~iFPEGTtt~g~~Ll~F-------~~~fa~l~----~pV~PVaI~~~~~~~~gt~~~ 460 (543)
..++ .+..+++.+.|++|. +.+.|..+..++..-.+| .++.+.++ .||+|+.+....
T Consensus 163 ~~~~~~~~~~r~ii~~Lk~g~~v~il~Dq~~~~~g~~v~FFG~~a~t~~g~a~LA~~~~apVvp~~~~r~~--------- 233 (298)
T PRK07920 163 PLTGGERPPFEVLAERLRAGGVVCLLADRDLTRSGVEVDFFGERTRMPAGPAALALETGAALLPVHLWFEG--------- 233 (298)
T ss_pred ecCCCCchHHHHHHHHHHcCCeEEEEeccCccCCCCEEeeCCCCCCCCCCHHHHHHHHCCcEEEEEEEEeC---------
Confidence 3221 246788889999997 889999987654444455 23444443 499999986531
Q ss_pred CcccccchhcccCCCCeEEEEEcccccCCcccCCCCCCHHHHHHHHHHHHHHH
Q 042170 461 GLKCLDPFFFLMNPSPGYTMQLLEGVSGLSMCQDGNESRFDVANYVQSELGKA 513 (543)
Q Consensus 461 ~~~~~d~~~~l~~P~~~v~V~fL~pi~~~~~~~~~~~~~~elA~~vq~~Ia~~ 513 (543)
. .|+|+|.||++.. ..++..+.+++.-+.+.+.
T Consensus 234 --------------~-~y~v~~~~~~~~~-----~~~~~~~~t~~~~~~lE~~ 266 (298)
T PRK07920 234 --------------D-GWGFRVHPPLDVP-----SAEDVAAMTQALADAFAAN 266 (298)
T ss_pred --------------C-eEEEEEeCCCCCC-----chhHHHHHHHHHHHHHHHH
Confidence 1 2889999998752 1245555555555554443
No 80
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=97.07 E-value=0.0054 Score=58.92 Aligned_cols=80 Identities=19% Similarity=0.146 Sum_probs=46.9
Q ss_pred cCHHHHHH---HHhCC-cEEEEeCCcHHHHHHHHHhhCCCcEEEeceEEEeCeEEeeeeccCCC-cHHHHHHHHHHhcCC
Q 042170 147 VGLEIFEV---LKKGG-KTVAVSNMPQVMIDSFLRDYLDIDLVVGRELKVFCGYFVGLMEDKKK-NILVLQEIIKQENSG 221 (543)
Q Consensus 147 l~~ea~~~---~~~~g-~~v~VSAsp~~~vepfak~~lG~d~VlgTelev~~G~~TG~~~g~~~-g~~Kv~~l~~~~~~~ 221 (543)
+.|++.+. +++.| +++++|.++..+++..++. +|++.. .++.+++.-.+... .++-...+.+.++-.
T Consensus 93 ~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~-~gl~~~-------fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~ 164 (198)
T TIGR01428 93 PHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKH-AGLDDP-------FDAVLSADAVRAYKPAPQVYQLALEALGVP 164 (198)
T ss_pred CCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-CCChhh-------hheeEehhhcCCCCCCHHHHHHHHHHhCCC
Confidence 45555554 44667 8889999999999998885 786311 12222222112111 234444454445533
Q ss_pred --ceEEEeCCCCCcchh
Q 042170 222 --DVIGISSLNSSLDHY 236 (543)
Q Consensus 222 --~~~aygD~~S~~D~~ 236 (543)
..+-.|| +..|..
T Consensus 165 p~~~~~vgD--~~~Di~ 179 (198)
T TIGR01428 165 PDEVLFVAS--NPWDLG 179 (198)
T ss_pred hhhEEEEeC--CHHHHH
Confidence 5678999 778876
No 81
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=97.05 E-value=0.0098 Score=57.99 Aligned_cols=165 Identities=9% Similarity=-0.015 Sum_probs=82.9
Q ss_pred eEEEEEcCCccccCCCchHHHHHHHHhhcchHHHHHHHHHHHHHH-hcccchhHHHHHHHHh--cCcccchhH-HHHhhc
Q 042170 64 RTLIFNVEGFLLKSSSLFPYFMLVAFEAGGLIRAFLLFILYPLIC-LAGEEMGLKIMVMVSF--FWVKKDNFR-VGRAVL 139 (543)
Q Consensus 64 ~~a~FD~DGTLl~~~s~fp~f~~~a~~~~~~~r~~~ll~~~p~~~-~l~~~~~~k~~~~~~f--~G~~~~~~~-va~avl 139 (543)
++++||+||||+.+...+-..+..+++.-|.-.... -..- ..+. ..+.++-..+ .|.+.++++ +-+.+.
T Consensus 2 k~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~~~-----~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (220)
T TIGR03351 2 SLVVLDMAGTTVDEDGLVYRALRQAVTAAGLSPTPE-----EVQSAWMGQ--SKIEAIRALLALDGADEAEAQAAFADFE 74 (220)
T ss_pred cEEEEecCCCeeccCchHHHHHHHHHHHcCCCCCHH-----HHHHhhcCC--CHHHHHHHHHhccCCCHHHHHHHHHHHH
Confidence 578999999999876655433333343333210000 0000 1111 1122221111 355544443 322222
Q ss_pred hh---hHHH---hcCHHHHHHHH---hCC-cEEEEeCCcHHHHHHHHHhhCCCc--EEEeceEEEeCeEEeeeeccCCC-
Q 042170 140 PK---FFLE---NVGLEIFEVLK---KGG-KTVAVSNMPQVMIDSFLRDYLDID--LVVGRELKVFCGYFVGLMEDKKK- 206 (543)
Q Consensus 140 pk---~~~e---~l~~ea~~~~~---~~g-~~v~VSAsp~~~vepfak~~lG~d--~VlgTelev~~G~~TG~~~g~~~- 206 (543)
.. .+.. .+.|.+.+.++ +.| ++.+||++++..++..++. +|++ ... +..+++.-.+...
T Consensus 75 ~~~~~~~~~~~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~-~~l~~~~~f-------~~i~~~~~~~~~KP 146 (220)
T TIGR03351 75 ERLAEAYDDGPPVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEK-LGWTVGDDV-------DAVVCPSDVAAGRP 146 (220)
T ss_pred HHHHHHhcccCCccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHH-hhhhhhccC-------CEEEcCCcCCCCCC
Confidence 21 1111 25555555444 667 8889999999999999885 6653 111 1112211111111
Q ss_pred cHHHHHHHHHHhcC---CceEEEeCCCCCcchhcccccccCcee
Q 042170 207 NILVLQEIIKQENS---GDVIGISSLNSSLDHYKLFLQQCNEVY 247 (543)
Q Consensus 207 g~~Kv~~l~~~~~~---~~~~aygD~~S~~D~~~m~L~~~~~~y 247 (543)
.++-...+.+.++. +..+..|| +..|.. . -..++-+.
T Consensus 147 ~p~~~~~a~~~~~~~~~~~~~~igD--~~~Di~-a-a~~aG~~~ 186 (220)
T TIGR03351 147 APDLILRAMELTGVQDVQSVAVAGD--TPNDLE-A-GINAGAGA 186 (220)
T ss_pred CHHHHHHHHHHcCCCChhHeEEeCC--CHHHHH-H-HHHCCCCe
Confidence 24445555554442 25689999 888988 6 56777765
No 82
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=96.93 E-value=0.0083 Score=58.60 Aligned_cols=167 Identities=15% Similarity=0.076 Sum_probs=83.8
Q ss_pred eEEEEEcCCccccCCCchHHHHHHHHhhcchH--HHHHHHHHHHHHHhcccchhHHHHHHHHhcCcc--cchhH-HHHhh
Q 042170 64 RTLIFNVEGFLLKSSSLFPYFMLVAFEAGGLI--RAFLLFILYPLICLAGEEMGLKIMVMVSFFWVK--KDNFR-VGRAV 138 (543)
Q Consensus 64 ~~a~FD~DGTLl~~~s~fp~f~~~a~~~~~~~--r~~~ll~~~p~~~~l~~~~~~k~~~~~~f~G~~--~~~~~-va~av 138 (543)
+.++||+||||+.+......-+.-.+..-|.. ..-+ +....-+......+ .++ .-.|.. .+++. .-++.
T Consensus 5 ~~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~----~~~~~g~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~ 78 (221)
T PRK10563 5 EAVFFDCDGTLVDSEVICSRAYVTMFAEFGITLSLEEV----FKRFKGVKLYEIID-IIS-KEHGVTLAKAELEPVYRAE 78 (221)
T ss_pred CEEEECCCCCCCCChHHHHHHHHHHHHHcCCCCCHHHH----HHHhcCCCHHHHHH-HHH-HHhCCCCCHHHHHHHHHHH
Confidence 68899999999977554322222222222321 1000 00000011111122 111 223553 34444 33333
Q ss_pred chhhHHH--hcCHHHHHHHHhCC-cEEEEeCCcHHHHHHHHHhhCCCcEEEeceEEEeCeEEeeeeccCCC-cHHHHHHH
Q 042170 139 LPKFFLE--NVGLEIFEVLKKGG-KTVAVSNMPQVMIDSFLRDYLDIDLVVGRELKVFCGYFVGLMEDKKK-NILVLQEI 214 (543)
Q Consensus 139 lpk~~~e--~l~~ea~~~~~~~g-~~v~VSAsp~~~vepfak~~lG~d~VlgTelev~~G~~TG~~~g~~~-g~~Kv~~l 214 (543)
+...+.. .+.|.+-+.++.-+ ++.++|++++.+++..++. +|++...- +..++|.-.+... .++-...+
T Consensus 79 ~~~~~~~~~~~~~gv~~~L~~L~~~~~ivTn~~~~~~~~~l~~-~~l~~~F~------~~v~~~~~~~~~KP~p~~~~~a 151 (221)
T PRK10563 79 VARLFDSELEPIAGANALLESITVPMCVVSNGPVSKMQHSLGK-TGMLHYFP------DKLFSGYDIQRWKPDPALMFHA 151 (221)
T ss_pred HHHHHHccCCcCCCHHHHHHHcCCCEEEEeCCcHHHHHHHHHh-cChHHhCc------ceEeeHHhcCCCCCChHHHHHH
Confidence 3333222 25566777777666 8889999999999998885 67642211 1123332222222 34455555
Q ss_pred HHHhcCC--ceEEEeCCCCCcchhcccccccCcee
Q 042170 215 IKQENSG--DVIGISSLNSSLDHYKLFLQQCNEVY 247 (543)
Q Consensus 215 ~~~~~~~--~~~aygD~~S~~D~~~m~L~~~~~~y 247 (543)
.+.++-. ..+-+|| |..|.. - -..+|=..
T Consensus 152 ~~~~~~~p~~~l~igD--s~~di~-a-A~~aG~~~ 182 (221)
T PRK10563 152 AEAMNVNVENCILVDD--SSAGAQ-S-GIAAGMEV 182 (221)
T ss_pred HHHcCCCHHHeEEEeC--cHhhHH-H-HHHCCCEE
Confidence 5555533 5678999 888876 4 23455443
No 83
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=96.88 E-value=0.02 Score=55.53 Aligned_cols=87 Identities=16% Similarity=0.042 Sum_probs=51.1
Q ss_pred cCHHHHHHHH---hCCcEEEEeCCcHHHHHHHHHhhCCCcEEEeceEEEeCeEEeeeeccCCC-cHHHHHHHHHHh-cCC
Q 042170 147 VGLEIFEVLK---KGGKTVAVSNMPQVMIDSFLRDYLDIDLVVGRELKVFCGYFVGLMEDKKK-NILVLQEIIKQE-NSG 221 (543)
Q Consensus 147 l~~ea~~~~~---~~g~~v~VSAsp~~~vepfak~~lG~d~VlgTelev~~G~~TG~~~g~~~-g~~Kv~~l~~~~-~~~ 221 (543)
+.|++.+.++ +..+++++|.+++..+++.+++ +|++... +..+++.-.+... .++-...+.+.+ +-.
T Consensus 98 ~~~g~~~~L~~l~~~~~~~i~Sn~~~~~~~~~l~~-~~l~~~f-------d~i~~~~~~~~~KP~~~~~~~~~~~~~~~~ 169 (224)
T TIGR02254 98 LLPGAFELMENLQQKFRLYIVTNGVRETQYKRLRK-SGLFPFF-------DDIFVSEDAGIQKPDKEIFNYALERMPKFS 169 (224)
T ss_pred eCccHHHHHHHHHhcCcEEEEeCCchHHHHHHHHH-CCcHhhc-------CEEEEcCccCCCCCCHHHHHHHHHHhcCCC
Confidence 5666666555 3358889999999999998886 7875321 2333322222111 233344444444 422
Q ss_pred --ceEEEeCCCCC-cchhcccccccCc
Q 042170 222 --DVIGISSLNSS-LDHYKLFLQQCNE 245 (543)
Q Consensus 222 --~~~aygD~~S~-~D~~~m~L~~~~~ 245 (543)
..+..|| |. .|.. . -..+|=
T Consensus 170 ~~~~v~igD--~~~~di~-~-A~~~G~ 192 (224)
T TIGR02254 170 KEEVLMIGD--SLTADIK-G-GQNAGL 192 (224)
T ss_pred chheEEECC--CcHHHHH-H-HHHCCC
Confidence 6789999 86 6876 5 344554
No 84
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=96.87 E-value=0.02 Score=58.06 Aligned_cols=89 Identities=7% Similarity=-0.118 Sum_probs=49.0
Q ss_pred cCHHHHHHHH---hCC-cEEEEeCCcHHHHHHHHHhhCCCcEEEeceEEEeCeEEeeeeccCCC-cHHHHHHHHHHhcC-
Q 042170 147 VGLEIFEVLK---KGG-KTVAVSNMPQVMIDSFLRDYLDIDLVVGRELKVFCGYFVGLMEDKKK-NILVLQEIIKQENS- 220 (543)
Q Consensus 147 l~~ea~~~~~---~~g-~~v~VSAsp~~~vepfak~~lG~d~VlgTelev~~G~~TG~~~g~~~-g~~Kv~~l~~~~~~- 220 (543)
+.|.+.+.++ +.| ++.++|++++..++..++. +|.+... .+..+++.-.+... .++-...+.+.++-
T Consensus 102 ~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~-~~l~~~~------~d~i~~~~~~~~~KP~p~~~~~a~~~l~~~ 174 (267)
T PRK13478 102 PIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPL-AAAQGYR------PDHVVTTDDVPAGRPYPWMALKNAIELGVY 174 (267)
T ss_pred CCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHH-HhhcCCC------ceEEEcCCcCCCCCCChHHHHHHHHHcCCC
Confidence 4555555444 667 8889999999999988875 4433211 01222221111111 23333343344442
Q ss_pred --CceEEEeCCCCCcchhcccccccCce
Q 042170 221 --GDVIGISSLNSSLDHYKLFLQQCNEV 246 (543)
Q Consensus 221 --~~~~aygD~~S~~D~~~m~L~~~~~~ 246 (543)
+..+.+|| |..|.. . -..||-.
T Consensus 175 ~~~e~l~IGD--s~~Di~-a-A~~aG~~ 198 (267)
T PRK13478 175 DVAACVKVDD--TVPGIE-E-GLNAGMW 198 (267)
T ss_pred CCcceEEEcC--cHHHHH-H-HHHCCCE
Confidence 25789999 889987 5 3456543
No 85
>PHA02597 30.2 hypothetical protein; Provisional
Probab=96.78 E-value=0.0092 Score=57.32 Aligned_cols=82 Identities=9% Similarity=0.060 Sum_probs=40.0
Q ss_pred cCHHHHHHHH---hCCcEEEEeCCcHHHHHHHHHhhCCCcEEEeceEEEeCeEEeeeeccCCCcHHHHHHHHHHhcCCce
Q 042170 147 VGLEIFEVLK---KGGKTVAVSNMPQVMIDSFLRDYLDIDLVVGRELKVFCGYFVGLMEDKKKNILVLQEIIKQENSGDV 223 (543)
Q Consensus 147 l~~ea~~~~~---~~g~~v~VSAsp~~~vepfak~~lG~d~VlgTelev~~G~~TG~~~g~~~g~~Kv~~l~~~~~~~~~ 223 (543)
+.|.+.+.++ +.++.+++|+.++...+...+ .+|++..... ..+..+++....+ -++-...+.+.++.+..
T Consensus 75 ~~pG~~e~L~~L~~~~~~~i~Tn~~~~~~~~~~~-~~~l~~~f~~---~f~~i~~~~~~~~--kp~~~~~a~~~~~~~~~ 148 (197)
T PHA02597 75 AYDDALDVINKLKEDYDFVAVTALGDSIDALLNR-QFNLNALFPG---AFSEVLMCGHDES--KEKLFIKAKEKYGDRVV 148 (197)
T ss_pred CCCCHHHHHHHHHhcCCEEEEeCCccchhHHHHh-hCCHHHhCCC---cccEEEEeccCcc--cHHHHHHHHHHhCCCcE
Confidence 5566666555 456777777766655443333 3655421110 0111121111111 13344444444453356
Q ss_pred EEEeCCCCCcchh
Q 042170 224 IGISSLNSSLDHY 236 (543)
Q Consensus 224 ~aygD~~S~~D~~ 236 (543)
+.+|| |..|..
T Consensus 149 v~vgD--s~~di~ 159 (197)
T PHA02597 149 CFVDD--LAHNLD 159 (197)
T ss_pred EEeCC--CHHHHH
Confidence 79999 888865
No 86
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=96.76 E-value=0.023 Score=57.79 Aligned_cols=88 Identities=9% Similarity=-0.013 Sum_probs=51.3
Q ss_pred cCHHHHHHHH---hCC-cEEEEeCCcHHHHHHHHHhhCCCcEEEeceEEEeCeEEeeeeccCCC-cHHHHHHHHHHhcCC
Q 042170 147 VGLEIFEVLK---KGG-KTVAVSNMPQVMIDSFLRDYLDIDLVVGRELKVFCGYFVGLMEDKKK-NILVLQEIIKQENSG 221 (543)
Q Consensus 147 l~~ea~~~~~---~~g-~~v~VSAsp~~~vepfak~~lG~d~VlgTelev~~G~~TG~~~g~~~-g~~Kv~~l~~~~~~~ 221 (543)
+.|.+.+.+. +.| +++++|++++..++..++. +|++.. .+..+++.-.+... .++=...+.+.++-.
T Consensus 110 l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~-~gl~~~-------Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~ 181 (260)
T PLN03243 110 LRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEA-VGMEGF-------FSVVLAAEDVYRGKPDPEMFMYAAERLGFI 181 (260)
T ss_pred cCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHH-cCCHhh-------CcEEEecccCCCCCCCHHHHHHHHHHhCCC
Confidence 4555555444 677 8889999999999999885 776421 22223332211111 233334444444433
Q ss_pred --ceEEEeCCCCCcchhcccccccCce
Q 042170 222 --DVIGISSLNSSLDHYKLFLQQCNEV 246 (543)
Q Consensus 222 --~~~aygD~~S~~D~~~m~L~~~~~~ 246 (543)
..+.+|| |..|.. . -..+|-.
T Consensus 182 p~~~l~IgD--s~~Di~-a-A~~aG~~ 204 (260)
T PLN03243 182 PERCIVFGN--SNSSVE-A-AHDGCMK 204 (260)
T ss_pred hHHeEEEcC--CHHHHH-H-HHHcCCE
Confidence 6789999 888887 5 3445543
No 87
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=96.73 E-value=0.058 Score=51.18 Aligned_cols=80 Identities=16% Similarity=0.168 Sum_probs=49.9
Q ss_pred cCHHHHHHHHhC-CcEEEEeCCcHHHHHHHHHhhCCCcEEEeceEEEeCeEEeeeeccCC----C-cHHHHHHHHHHhcC
Q 042170 147 VGLEIFEVLKKG-GKTVAVSNMPQVMIDSFLRDYLDIDLVVGRELKVFCGYFVGLMEDKK----K-NILVLQEIIKQENS 220 (543)
Q Consensus 147 l~~ea~~~~~~~-g~~v~VSAsp~~~vepfak~~lG~d~VlgTelev~~G~~TG~~~g~~----~-g~~Kv~~l~~~~~~ 220 (543)
+.+.+.+.+++- ++++++|.+++..++..++. +|++. ..+..+++.-.+.. . .++-..++.+.++.
T Consensus 85 ~~~g~~~~L~~L~~~~~i~Tn~~~~~~~~~l~~-~gl~~-------~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~ 156 (184)
T TIGR01993 85 PDPELRNLLLRLPGRKIIFTNGDRAHARRALNR-LGIED-------CFDGIFCFDTANPDYLLPKPSPQAYEKALREAGV 156 (184)
T ss_pred CCHHHHHHHHhCCCCEEEEeCCCHHHHHHHHHH-cCcHh-------hhCeEEEeecccCccCCCCCCHHHHHHHHHHhCC
Confidence 567777777754 48889999999999999886 77742 12233333222221 1 24444555555553
Q ss_pred C--ceEEEeCCCCCcchh
Q 042170 221 G--DVIGISSLNSSLDHY 236 (543)
Q Consensus 221 ~--~~~aygD~~S~~D~~ 236 (543)
+ ..+.+|| +..|..
T Consensus 157 ~~~~~l~vgD--~~~di~ 172 (184)
T TIGR01993 157 DPERAIFFDD--SARNIA 172 (184)
T ss_pred CccceEEEeC--CHHHHH
Confidence 3 5678999 777765
No 88
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=96.73 E-value=0.033 Score=53.54 Aligned_cols=79 Identities=18% Similarity=0.160 Sum_probs=43.1
Q ss_pred cCHHHHHHHH---hCC-cEEEEeCCcHHHHHHHHHhhCCCcEEEeceEEEeCeEEeeeeccCCC-cHHHHHHHHHHhcCC
Q 042170 147 VGLEIFEVLK---KGG-KTVAVSNMPQVMIDSFLRDYLDIDLVVGRELKVFCGYFVGLMEDKKK-NILVLQEIIKQENSG 221 (543)
Q Consensus 147 l~~ea~~~~~---~~g-~~v~VSAsp~~~vepfak~~lG~d~VlgTelev~~G~~TG~~~g~~~-g~~Kv~~l~~~~~~~ 221 (543)
+.|.+.+.++ +.| +++++|.++..+ +..++. +|++... +..+++.-.+... .++-...+.+.++-.
T Consensus 106 ~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~-~~~l~~-~~l~~~f-------d~i~~s~~~~~~KP~~~~~~~~~~~~~~~ 176 (203)
T TIGR02252 106 VYPDAIKLLKDLRERGLILGVISNFDSRL-RGLLEA-LGLLEYF-------DFVVTSYEVGAEKPDPKIFQEALERAGIS 176 (203)
T ss_pred eCcCHHHHHHHHHHCCCEEEEEeCCchhH-HHHHHH-CCcHHhc-------ceEEeecccCCCCCCHHHHHHHHHHcCCC
Confidence 4555555444 667 788899888765 677775 6764211 1222221111111 233444444444533
Q ss_pred --ceEEEeCCCCC-cchh
Q 042170 222 --DVIGISSLNSS-LDHY 236 (543)
Q Consensus 222 --~~~aygD~~S~-~D~~ 236 (543)
..+-.|| |. .|..
T Consensus 177 ~~~~~~IgD--~~~~Di~ 192 (203)
T TIGR02252 177 PEEALHIGD--SLRNDYQ 192 (203)
T ss_pred hhHEEEECC--CchHHHH
Confidence 5678999 75 6765
No 89
>PRK11587 putative phosphatase; Provisional
Probab=96.71 E-value=0.021 Score=55.98 Aligned_cols=166 Identities=9% Similarity=-0.018 Sum_probs=77.8
Q ss_pred eEEEEEcCCccccCCCchHHHHHHHHhhcchHHHHHHHHHHHHHHhcccchhHHHHHHHHhcCcccchhH-HHHhh--ch
Q 042170 64 RTLIFNVEGFLLKSSSLFPYFMLVAFEAGGLIRAFLLFILYPLICLAGEEMGLKIMVMVSFFWVKKDNFR-VGRAV--LP 140 (543)
Q Consensus 64 ~~a~FD~DGTLl~~~s~fp~f~~~a~~~~~~~r~~~ll~~~p~~~~l~~~~~~k~~~~~~f~G~~~~~~~-va~av--lp 140 (543)
++++||+||||+.+...+..-+..++..-|+-.... .-...+.. .+...-..+.+.+.+++. .-+.. +-
T Consensus 4 k~viFDlDGTL~Ds~~~~~~a~~~~~~~~g~~~~~~------~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (218)
T PRK11587 4 KGFLFDLDGTLVDSLPAVERAWSNWADRHGIAPDEV------LNFIHGKQ--AITSLRHFMAGASEAEIQAEFTRLEQIE 75 (218)
T ss_pred CEEEEcCCCCcCcCHHHHHHHHHHHHHHcCCCHHHH------HHHHcCCC--HHHHHHHHhccCCcHHHHHHHHHHHHHH
Confidence 578999999999875544333333344434321100 00111211 111111112244444443 22211 11
Q ss_pred hhHHH--hcCHHHHHHHH---hCC-cEEEEeCCcHHHHHHHHHhhCCCcEEEeceEEEeCeEEeeeeccCCC-cHHHHHH
Q 042170 141 KFFLE--NVGLEIFEVLK---KGG-KTVAVSNMPQVMIDSFLRDYLDIDLVVGRELKVFCGYFVGLMEDKKK-NILVLQE 213 (543)
Q Consensus 141 k~~~e--~l~~ea~~~~~---~~g-~~v~VSAsp~~~vepfak~~lG~d~VlgTelev~~G~~TG~~~g~~~-g~~Kv~~ 213 (543)
..+.+ .+.|.+.+.+. +.| ++.+||++++..++..++. .|++.. +..+++.-.+... .++=...
T Consensus 76 ~~~~~~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~-~~l~~~--------~~i~~~~~~~~~KP~p~~~~~ 146 (218)
T PRK11587 76 ATDTEGITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKA-AGLPAP--------EVFVTAERVKRGKPEPDAYLL 146 (218)
T ss_pred HhhhcCceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHh-cCCCCc--------cEEEEHHHhcCCCCCcHHHHH
Confidence 11111 24566666554 677 8889998887777766654 565310 1122221111111 2233333
Q ss_pred HHHHhcCC--ceEEEeCCCCCcchhcccccccCc-eeecc
Q 042170 214 IIKQENSG--DVIGISSLNSSLDHYKLFLQQCNE-VYLVR 250 (543)
Q Consensus 214 l~~~~~~~--~~~aygD~~S~~D~~~m~L~~~~~-~y~v~ 250 (543)
+.+.++-. ..+..|| |..|.. . -..+|= ...|+
T Consensus 147 ~~~~~g~~p~~~l~igD--s~~di~-a-A~~aG~~~i~v~ 182 (218)
T PRK11587 147 GAQLLGLAPQECVVVED--APAGVL-S-GLAAGCHVIAVN 182 (218)
T ss_pred HHHHcCCCcccEEEEec--chhhhH-H-HHHCCCEEEEEC
Confidence 33344432 6788999 888886 5 344553 34444
No 90
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=96.68 E-value=0.018 Score=59.00 Aligned_cols=86 Identities=13% Similarity=0.086 Sum_probs=50.0
Q ss_pred cCHHHHHHHH---hCC-cEEEEeCCcHHHHHHHHHhhCCCcEEEeceEEEeCeEEeeeeccCCCcHHHHHHHHHHhcCC-
Q 042170 147 VGLEIFEVLK---KGG-KTVAVSNMPQVMIDSFLRDYLDIDLVVGRELKVFCGYFVGLMEDKKKNILVLQEIIKQENSG- 221 (543)
Q Consensus 147 l~~ea~~~~~---~~g-~~v~VSAsp~~~vepfak~~lG~d~VlgTelev~~G~~TG~~~g~~~g~~Kv~~l~~~~~~~- 221 (543)
+.|.+.+.++ +.| +..+||++.+..++..++. +|++...- ...++.-.. ...+-...+.+.++-.
T Consensus 143 l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~-~gl~~~F~-------~vi~~~~~~--~k~~~~~~~l~~~~~~p 212 (273)
T PRK13225 143 LFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQR-QGLRSLFS-------VVQAGTPIL--SKRRALSQLVAREGWQP 212 (273)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-cCChhheE-------EEEecCCCC--CCHHHHHHHHHHhCcCh
Confidence 4566666555 677 8888999999999999885 78753221 112221111 1122233333333322
Q ss_pred -ceEEEeCCCCCcchhcccccccCce
Q 042170 222 -DVIGISSLNSSLDHYKLFLQQCNEV 246 (543)
Q Consensus 222 -~~~aygD~~S~~D~~~m~L~~~~~~ 246 (543)
..+.+|| |..|.. . -..++-.
T Consensus 213 ~~~l~IGD--s~~Di~-a-A~~AG~~ 234 (273)
T PRK13225 213 AAVMYVGD--ETRDVE-A-ARQVGLI 234 (273)
T ss_pred hHEEEECC--CHHHHH-H-HHHCCCe
Confidence 5679999 888987 5 4445543
No 91
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=96.58 E-value=0.024 Score=53.40 Aligned_cols=78 Identities=17% Similarity=0.064 Sum_probs=39.9
Q ss_pred cCHHHHHHHH---hCC-cEEEEeCCcHHHHHHHHHhhCCCcEEEeceEEEeCeEEeeeeccCCC-cHHHHHHHHHHhcCC
Q 042170 147 VGLEIFEVLK---KGG-KTVAVSNMPQVMIDSFLRDYLDIDLVVGRELKVFCGYFVGLMEDKKK-NILVLQEIIKQENSG 221 (543)
Q Consensus 147 l~~ea~~~~~---~~g-~~v~VSAsp~~~vepfak~~lG~d~VlgTelev~~G~~TG~~~g~~~-g~~Kv~~l~~~~~~~ 221 (543)
+.|++.+.++ +.| ++.++|.+.. .+..++. +|++... +..+++.-.+... .++-...+.+.++-.
T Consensus 88 ~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~-~~l~~~f-------~~~~~~~~~~~~kp~p~~~~~~~~~~~~~ 157 (185)
T TIGR01990 88 VLPGIKNLLDDLKKNNIKIALASASKN--APTVLEK-LGLIDYF-------DAIVDPAEIKKGKPDPEIFLAAAEGLGVS 157 (185)
T ss_pred cCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHh-cCcHhhC-------cEEEehhhcCCCCCChHHHHHHHHHcCCC
Confidence 4566555444 677 7778887653 3456664 7754221 2223322111111 123333333334432
Q ss_pred --ceEEEeCCCCCcchh
Q 042170 222 --DVIGISSLNSSLDHY 236 (543)
Q Consensus 222 --~~~aygD~~S~~D~~ 236 (543)
..+.+|| +..|..
T Consensus 158 ~~~~v~vgD--~~~di~ 172 (185)
T TIGR01990 158 PSECIGIED--AQAGIE 172 (185)
T ss_pred HHHeEEEec--CHHHHH
Confidence 5778999 778875
No 92
>PLN02940 riboflavin kinase
Probab=96.57 E-value=0.021 Score=61.30 Aligned_cols=37 Identities=5% Similarity=-0.094 Sum_probs=30.3
Q ss_pred CeEEEEEcccccCCcccCCCCCCHHHHHHHHHHHHHHHhCC
Q 042170 476 PGYTMQLLEGVSGLSMCQDGNESRFDVANYVQSELGKALGF 516 (543)
Q Consensus 476 ~~v~V~fL~pi~~~~~~~~~~~~~~elA~~vq~~Ia~~Lg~ 516 (543)
..++|.|+.-|.+|. ...+-++|.+++++-|..+..+
T Consensus 326 ~~i~v~~~~~lR~e~----kF~~~~~L~~qi~~D~~~a~~~ 362 (382)
T PLN02940 326 EELRLVIVGYIRPEA----NFPSLESLIAKIHEDRRIAEKA 362 (382)
T ss_pred CeEEEEEehhcCCCC----CCCCHHHHHHHHHHHHHHHHHH
Confidence 459999999998853 3678999999999999887654
No 93
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=96.49 E-value=0.0094 Score=60.03 Aligned_cols=99 Identities=12% Similarity=0.123 Sum_probs=55.7
Q ss_pred HHHHHHHHhCC-cEEEEeCC----cHHHHHHHHHhhCCCcEEEeceEEEeCeEEeeeeccCCCcHHHHHHHHHHhcCCce
Q 042170 149 LEIFEVLKKGG-KTVAVSNM----PQVMIDSFLRDYLDIDLVVGRELKVFCGYFVGLMEDKKKNILVLQEIIKQENSGDV 223 (543)
Q Consensus 149 ~ea~~~~~~~g-~~v~VSAs----p~~~vepfak~~lG~d~VlgTelev~~G~~TG~~~g~~~g~~Kv~~l~~~~~~~~~ 223 (543)
.|.++.+++.| ++++||+. ++..++..++. +|++... +-.++|.-.+... .+|..++++ .+ ..
T Consensus 120 ~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~-lGi~~~f-------~~i~~~d~~~~~K-p~~~~~l~~-~~--i~ 187 (237)
T TIGR01672 120 RQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKN-FHIPAMN-------PVIFAGDKPGQYQ-YTKTQWIQD-KN--IR 187 (237)
T ss_pred HHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHH-hCCchhe-------eEEECCCCCCCCC-CCHHHHHHh-CC--Ce
Confidence 34455666777 88899987 88999998775 8997533 1224544433222 224444432 12 36
Q ss_pred EEEeCCCCCcchhcccccccCcee-eccCCcccCCcccccC
Q 042170 224 IGISSLNSSLDHYKLFLQQCNEVY-LVRSTDKRSWQHLSRD 263 (543)
Q Consensus 224 ~aygD~~S~~D~~~m~L~~~~~~y-~v~p~~~~~w~~l~~~ 263 (543)
+.||| |..|.. - -.-++-.. .|.-.......++|..
T Consensus 188 i~vGD--s~~DI~-a-Ak~AGi~~I~V~~g~~s~~~~~~~~ 224 (237)
T TIGR01672 188 IHYGD--SDNDIT-A-AKEAGARGIRILRASNSTYKPLPQA 224 (237)
T ss_pred EEEeC--CHHHHH-H-HHHCCCCEEEEEecCCCCCCCcccc
Confidence 89999 889986 4 23455332 2222222233466644
No 94
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=96.42 E-value=0.048 Score=58.60 Aligned_cols=83 Identities=13% Similarity=0.054 Sum_probs=50.3
Q ss_pred cCHHHHHHHH---hCC-cEEEEeCCcHHHHHHHHHhhCCCc----EEEeceEEEeCeEEeeeeccCCC-cHHHHHHHHHH
Q 042170 147 VGLEIFEVLK---KGG-KTVAVSNMPQVMIDSFLRDYLDID----LVVGRELKVFCGYFVGLMEDKKK-NILVLQEIIKQ 217 (543)
Q Consensus 147 l~~ea~~~~~---~~g-~~v~VSAsp~~~vepfak~~lG~d----~VlgTelev~~G~~TG~~~g~~~-g~~Kv~~l~~~ 217 (543)
+.|.+.+.+. +.| +..++|++++..++..++. +|++ .++|.+ -.+... .++-.....+.
T Consensus 217 l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~-lgL~~yFd~Iv~sd-----------dv~~~KP~Peifl~A~~~ 284 (381)
T PLN02575 217 LRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGS-IGIRGFFSVIVAAE-----------DVYRGKPDPEMFIYAAQL 284 (381)
T ss_pred cCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-cCCHHHceEEEecC-----------cCCCCCCCHHHHHHHHHH
Confidence 4455555444 677 8889999999999999986 7864 333332 111111 13333444444
Q ss_pred hcCC--ceEEEeCCCCCcchhcccccccCc
Q 042170 218 ENSG--DVIGISSLNSSLDHYKLFLQQCNE 245 (543)
Q Consensus 218 ~~~~--~~~aygD~~S~~D~~~m~L~~~~~ 245 (543)
++-. ..+.+|| |..|.. . -..++-
T Consensus 285 lgl~Peecl~IGD--S~~DIe-A-Ak~AGm 310 (381)
T PLN02575 285 LNFIPERCIVFGN--SNQTVE-A-AHDARM 310 (381)
T ss_pred cCCCcccEEEEcC--CHHHHH-H-HHHcCC
Confidence 4432 6789999 888876 4 334443
No 95
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=96.26 E-value=0.1 Score=50.34 Aligned_cols=81 Identities=12% Similarity=0.227 Sum_probs=48.9
Q ss_pred cCHHHHHHHH---hCC-cEEEEeCCcHHHHHHHHHhhCCCcEEEeceEEEeCeEEeeeeccCCC-cHHHHHHHHHHhcCC
Q 042170 147 VGLEIFEVLK---KGG-KTVAVSNMPQVMIDSFLRDYLDIDLVVGRELKVFCGYFVGLMEDKKK-NILVLQEIIKQENSG 221 (543)
Q Consensus 147 l~~ea~~~~~---~~g-~~v~VSAsp~~~vepfak~~lG~d~VlgTelev~~G~~TG~~~g~~~-g~~Kv~~l~~~~~~~ 221 (543)
+.|.+.+.++ +.| +++++|.+++.+++.+...+.++.. ..+..++..-.+... .++-...+.+.++-.
T Consensus 85 ~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~-------~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~ 157 (199)
T PRK09456 85 LRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRA-------AADHIYLSQDLGMRKPEARIYQHVLQAEGFS 157 (199)
T ss_pred cCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHH-------hcCEEEEecccCCCCCCHHHHHHHHHHcCCC
Confidence 5677666555 677 8889999999888877654434321 123333333332222 345555666665543
Q ss_pred --ceEEEeCCCCCcchh
Q 042170 222 --DVIGISSLNSSLDHY 236 (543)
Q Consensus 222 --~~~aygD~~S~~D~~ 236 (543)
..+..|| +..|..
T Consensus 158 p~~~l~vgD--~~~di~ 172 (199)
T PRK09456 158 AADAVFFDD--NADNIE 172 (199)
T ss_pred hhHeEEeCC--CHHHHH
Confidence 6678999 777764
No 96
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=96.24 E-value=0.04 Score=53.23 Aligned_cols=90 Identities=13% Similarity=0.059 Sum_probs=52.8
Q ss_pred cCHHHHHHHH---hCC-cEEEEeCCcHHHHHHHHHhhCCCcEEEeceEEEeCeEEeeeeccCCC-cHHHHHHHHHHhcCC
Q 042170 147 VGLEIFEVLK---KGG-KTVAVSNMPQVMIDSFLRDYLDIDLVVGRELKVFCGYFVGLMEDKKK-NILVLQEIIKQENSG 221 (543)
Q Consensus 147 l~~ea~~~~~---~~g-~~v~VSAsp~~~vepfak~~lG~d~VlgTelev~~G~~TG~~~g~~~-g~~Kv~~l~~~~~~~ 221 (543)
+.|++.+.++ +.| +++++|...+..++..++. +|++... +..+++.-.+... ..+-...+.+.++-.
T Consensus 76 ~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~-~~l~~~f-------~~i~~~~~~~~~KP~~~~~~~~~~~~~~~ 147 (205)
T TIGR01454 76 VFPGVPELLAELRADGVGTAIATGKSGPRARSLLEA-LGLLPLF-------DHVIGSDEVPRPKPAPDIVREALRLLDVP 147 (205)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHH-cCChhhe-------eeEEecCcCCCCCCChHHHHHHHHHcCCC
Confidence 4566666555 667 8889999999999988875 7875322 1122211111001 133344444444432
Q ss_pred --ceEEEeCCCCCcchhcccccccCceee
Q 042170 222 --DVIGISSLNSSLDHYKLFLQQCNEVYL 248 (543)
Q Consensus 222 --~~~aygD~~S~~D~~~m~L~~~~~~y~ 248 (543)
..+..|| |..|.. . ...+|-+.+
T Consensus 148 ~~~~l~igD--~~~Di~-a-A~~~Gi~~i 172 (205)
T TIGR01454 148 PEDAVMVGD--AVTDLA-S-ARAAGTATV 172 (205)
T ss_pred hhheEEEcC--CHHHHH-H-HHHcCCeEE
Confidence 5688999 888987 6 556665543
No 97
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=96.14 E-value=0.047 Score=59.90 Aligned_cols=88 Identities=11% Similarity=0.072 Sum_probs=49.8
Q ss_pred cCHHHHHHH---HhCC-cEEEEeCCcHHHHHHHHHhhCCCcEEEeceEEEeCeEEeeeeccCCCcHHHHHHHHHHhcCCc
Q 042170 147 VGLEIFEVL---KKGG-KTVAVSNMPQVMIDSFLRDYLDIDLVVGRELKVFCGYFVGLMEDKKKNILVLQEIIKQENSGD 222 (543)
Q Consensus 147 l~~ea~~~~---~~~g-~~v~VSAsp~~~vepfak~~lG~d~VlgTelev~~G~~TG~~~g~~~g~~Kv~~l~~~~~~~~ 222 (543)
+.|.+.+.+ ++.| +..++|++++.+++..++. +|++..... .+++.-.....-++-...+.+.++.+.
T Consensus 331 l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~-~~l~~~f~~-------i~~~d~v~~~~kP~~~~~al~~l~~~~ 402 (459)
T PRK06698 331 LYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSY-YDLDQWVTE-------TFSIEQINSLNKSDLVKSILNKYDIKE 402 (459)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHH-CCcHhhcce-------eEecCCCCCCCCcHHHHHHHHhcCcce
Confidence 455555544 4667 8889999999999999985 786532211 111111100000111222222233336
Q ss_pred eEEEeCCCCCcchhcccccccCce
Q 042170 223 VIGISSLNSSLDHYKLFLQQCNEV 246 (543)
Q Consensus 223 ~~aygD~~S~~D~~~m~L~~~~~~ 246 (543)
.+..|| |..|.. . -..++-.
T Consensus 403 ~v~VGD--s~~Di~-a-Ak~AG~~ 422 (459)
T PRK06698 403 AAVVGD--RLSDIN-A-AKDNGLI 422 (459)
T ss_pred EEEEeC--CHHHHH-H-HHHCCCe
Confidence 789999 889987 6 5666654
No 98
>PRK09449 dUMP phosphatase; Provisional
Probab=96.14 E-value=0.09 Score=51.34 Aligned_cols=88 Identities=13% Similarity=0.026 Sum_probs=50.8
Q ss_pred cCHHHHHHHH--hCC-cEEEEeCCcHHHHHHHHHhhCCCcEEEeceEEEeCeEEeeeeccCCC-cHHHHHHHHHHhcC-C
Q 042170 147 VGLEIFEVLK--KGG-KTVAVSNMPQVMIDSFLRDYLDIDLVVGRELKVFCGYFVGLMEDKKK-NILVLQEIIKQENS-G 221 (543)
Q Consensus 147 l~~ea~~~~~--~~g-~~v~VSAsp~~~vepfak~~lG~d~VlgTelev~~G~~TG~~~g~~~-g~~Kv~~l~~~~~~-~ 221 (543)
+.|.+.+.++ +.| ++.++|.++..+++..++. +|++.. .+..+++.-.+... .++-...+.+.++. .
T Consensus 96 ~~~g~~~~L~~L~~~~~~~i~Tn~~~~~~~~~l~~-~~l~~~-------fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~ 167 (224)
T PRK09449 96 PLPGAVELLNALRGKVKMGIITNGFTELQQVRLER-TGLRDY-------FDLLVISEQVGVAKPDVAIFDYALEQMGNPD 167 (224)
T ss_pred cCccHHHHHHHHHhCCeEEEEeCCcHHHHHHHHHh-CChHHH-------cCEEEEECccCCCCCCHHHHHHHHHHcCCCC
Confidence 4555555444 245 8888999999999988875 776421 22333332222112 24455555555552 2
Q ss_pred --ceEEEeCCCCC-cchhcccccccCce
Q 042170 222 --DVIGISSLNSS-LDHYKLFLQQCNEV 246 (543)
Q Consensus 222 --~~~aygD~~S~-~D~~~m~L~~~~~~ 246 (543)
..+-.|| |. .|.. . -..+|-.
T Consensus 168 ~~~~~~vgD--~~~~Di~-~-A~~aG~~ 191 (224)
T PRK09449 168 RSRVLMVGD--NLHSDIL-G-GINAGID 191 (224)
T ss_pred cccEEEEcC--CcHHHHH-H-HHHCCCc
Confidence 4678899 86 5876 4 3445543
No 99
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=96.12 E-value=0.028 Score=52.61 Aligned_cols=77 Identities=14% Similarity=0.107 Sum_probs=46.8
Q ss_pred cCHHHHHHHHhCCcEEEEeCCcHHHHHHHHHhhCCCcEEEeceEEEeCeEEeeeeccCCC-cHHHHHHHHHHhcCC--ce
Q 042170 147 VGLEIFEVLKKGGKTVAVSNMPQVMIDSFLRDYLDIDLVVGRELKVFCGYFVGLMEDKKK-NILVLQEIIKQENSG--DV 223 (543)
Q Consensus 147 l~~ea~~~~~~~g~~v~VSAsp~~~vepfak~~lG~d~VlgTelev~~G~~TG~~~g~~~-g~~Kv~~l~~~~~~~--~~ 223 (543)
+.|.+.+.++ ++.++|++++.+++..++. +|++.. .+..+++...+... .++-...+.+.++-. ..
T Consensus 91 ~~~g~~~~L~---~~~i~Tn~~~~~~~~~l~~-~~l~~~-------fd~v~~~~~~~~~KP~p~~f~~~~~~~~~~p~~~ 159 (175)
T TIGR01493 91 PWPDSAAALA---RVAILSNASHWAFDQFAQQ-AGLPWY-------FDRAFSVDTVRAYKPDPVVYELVFDTVGLPPDRV 159 (175)
T ss_pred CCCchHHHHH---HHhhhhCCCHHHHHHHHHH-CCCHHH-------HhhhccHhhcCCCCCCHHHHHHHHHHHCCCHHHe
Confidence 6777788777 4678899999999999875 776422 12233333222212 233333444444433 56
Q ss_pred EEEeCCCCCcchh
Q 042170 224 IGISSLNSSLDHY 236 (543)
Q Consensus 224 ~aygD~~S~~D~~ 236 (543)
+-+|| |..|..
T Consensus 160 l~vgD--~~~Di~ 170 (175)
T TIGR01493 160 LMVAA--HQWDLI 170 (175)
T ss_pred EeEec--ChhhHH
Confidence 88999 777754
No 100
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=95.99 E-value=0.071 Score=64.52 Aligned_cols=81 Identities=14% Similarity=0.085 Sum_probs=47.4
Q ss_pred cCHHHHHHHH---hCC-cEEEEeCCcHHHHHHHHHhhCCCcEEEeceEEEeCeEEeeeeccCCC-cHHHHHHHHHHhcCC
Q 042170 147 VGLEIFEVLK---KGG-KTVAVSNMPQVMIDSFLRDYLDIDLVVGRELKVFCGYFVGLMEDKKK-NILVLQEIIKQENSG 221 (543)
Q Consensus 147 l~~ea~~~~~---~~g-~~v~VSAsp~~~vepfak~~lG~d~VlgTelev~~G~~TG~~~g~~~-g~~Kv~~l~~~~~~~ 221 (543)
+.|.+.+.++ +.| +++++|++++.+++..++. +|++. ...+..+++.-.+... .++-...+.+.++-.
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~-~gl~~------~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~lgv~ 234 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAA-AGLPL------SMFDAIVSADAFENLKPAPDIFLAAAKILGVP 234 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHH-cCCCh------hHCCEEEECcccccCCCCHHHHHHHHHHcCcC
Confidence 4566666555 678 8889999999999999876 67640 1112223332222112 234444444444432
Q ss_pred --ceEEEeCCCCCcchh
Q 042170 222 --DVIGISSLNSSLDHY 236 (543)
Q Consensus 222 --~~~aygD~~S~~D~~ 236 (543)
..+.+|| +..|..
T Consensus 235 p~e~v~IgD--s~~Di~ 249 (1057)
T PLN02919 235 TSECVVIED--ALAGVQ 249 (1057)
T ss_pred cccEEEEcC--CHHHHH
Confidence 5678888 666665
No 101
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=95.99 E-value=0.14 Score=50.76 Aligned_cols=84 Identities=14% Similarity=0.102 Sum_probs=51.2
Q ss_pred cCHHHHHHH---HhCC-cEEEEeCCcHHHHHHHHHhhCCCc----EEEeceEEEeCeEEeeeeccCCC-cHHHHHHHHHH
Q 042170 147 VGLEIFEVL---KKGG-KTVAVSNMPQVMIDSFLRDYLDID----LVVGRELKVFCGYFVGLMEDKKK-NILVLQEIIKQ 217 (543)
Q Consensus 147 l~~ea~~~~---~~~g-~~v~VSAsp~~~vepfak~~lG~d----~VlgTelev~~G~~TG~~~g~~~-g~~Kv~~l~~~ 217 (543)
+.|.+.+.+ ++.| ++.++|++++..++..++. +|++ .+++++ -.+... .++-...+.+.
T Consensus 94 ~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~-~~l~~~fd~iv~s~-----------~~~~~KP~p~~~~~~~~~ 161 (224)
T PRK14988 94 LREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEH-TGLDAHLDLLLSTH-----------TFGYPKEDQRLWQAVAEH 161 (224)
T ss_pred cCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHH-CCcHHHCCEEEEee-----------eCCCCCCCHHHHHHHHHH
Confidence 445555544 4677 8889999999999988764 7753 444433 121111 24444555455
Q ss_pred hcCC--ceEEEeCCCCCcchhcccccccCce
Q 042170 218 ENSG--DVIGISSLNSSLDHYKLFLQQCNEV 246 (543)
Q Consensus 218 ~~~~--~~~aygD~~S~~D~~~m~L~~~~~~ 246 (543)
++-. ..+.+|| |..|.. - -..+|=.
T Consensus 162 ~~~~p~~~l~igD--s~~di~-a-A~~aG~~ 188 (224)
T PRK14988 162 TGLKAERTLFIDD--SEPILD-A-AAQFGIR 188 (224)
T ss_pred cCCChHHEEEEcC--CHHHHH-H-HHHcCCe
Confidence 5533 6789999 888876 4 3456654
No 102
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=95.94 E-value=0.049 Score=49.75 Aligned_cols=76 Identities=18% Similarity=0.203 Sum_probs=49.3
Q ss_pred cCHHHHHHHH---hCC-cEEEEeCCcHHHHHHHHHhhCCCc----EEEeceEEEeCeEEeeeeccCCC-cHHHHHHHHHH
Q 042170 147 VGLEIFEVLK---KGG-KTVAVSNMPQVMIDSFLRDYLDID----LVVGRELKVFCGYFVGLMEDKKK-NILVLQEIIKQ 217 (543)
Q Consensus 147 l~~ea~~~~~---~~g-~~v~VSAsp~~~vepfak~~lG~d----~VlgTelev~~G~~TG~~~g~~~-g~~Kv~~l~~~ 217 (543)
+.|++.+.++ +.| +++++|..+..+++..+++ +|++ .+++.+ -.+... .++-.+.+.+.
T Consensus 78 ~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~-~~~~~~f~~i~~~~-----------~~~~~Kp~~~~~~~~~~~ 145 (176)
T PF13419_consen 78 PYPGVRELLERLKAKGIPLVIVSNGSRERIERVLER-LGLDDYFDEIISSD-----------DVGSRKPDPDAYRRALEK 145 (176)
T ss_dssp ESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHH-TTHGGGCSEEEEGG-----------GSSSSTTSHHHHHHHHHH
T ss_pred hhhhhhhhhhhcccccceeEEeecCCcccccccccc-cccccccccccccc-----------hhhhhhhHHHHHHHHHHH
Confidence 5566666554 567 8889999999999999986 6754 444332 111112 24555666666
Q ss_pred hcCC--ceEEEeCCCCCcchh
Q 042170 218 ENSG--DVIGISSLNSSLDHY 236 (543)
Q Consensus 218 ~~~~--~~~aygD~~S~~D~~ 236 (543)
++-. ..+..|| +..|..
T Consensus 146 ~~~~p~~~~~vgD--~~~d~~ 164 (176)
T PF13419_consen 146 LGIPPEEILFVGD--SPSDVE 164 (176)
T ss_dssp HTSSGGGEEEEES--SHHHHH
T ss_pred cCCCcceEEEEeC--CHHHHH
Confidence 6533 6779999 777765
No 103
>PLN02349 glycerol-3-phosphate acyltransferase
Probab=95.91 E-value=0.01 Score=63.22 Aligned_cols=160 Identities=21% Similarity=0.291 Sum_probs=81.7
Q ss_pred CceEEEecCCCCCcHHHHHHhhcCceeEEeeehhhhh------hhh-hc------CceeEeec-----------Cch---
Q 042170 347 ERTLYVCNHRTLLDPLYLSFALKKNLTAVTYSLSRMS------EIL-AP------IKTVRMTR-----------NRD--- 399 (543)
Q Consensus 347 ~~~l~VaNH~S~LD~~vl~a~l~~~~~~va~sl~~v~------~~l-~~------i~tv~v~R-----------~r~--- 399 (543)
..+|+.|||+|-.|+.+|...+...-..++-.+-.+. +.+ .| +-.|+-.+ .++
T Consensus 201 ~nVvllsNHQseaDp~ii~llle~~~p~iae~~iyvAGdrv~~DpL~~PFSmGrNLlCVySKKhm~d~Pelke~K~~~N~ 280 (426)
T PLN02349 201 HNVVLLSNHQSEADPAVIALLLEKSHPYLAENVTYVAGDRVVTDPLCKPFSMGRNLICVHSKKHMNDDPELKEMKRKANT 280 (426)
T ss_pred CCEEEEeccccccchHHHHHHHhccCHHHHhhhhhhccceEeeccccCccccCCceEEEEeccccCCChhhHHHHHHHHH
Confidence 4899999999999999999887543222211100000 111 11 12233333 011
Q ss_pred HHHHHHHHHHhCCC--eEEecCccccCCC------cccccch----hh---hhcC-C--ceEEEEEEeccccccccccC-
Q 042170 400 QDAKLVKSLLNQGD--LVICPEGTTCREP------YLLRFSP----LF---AEMS-D--NIIPVASNSHVTMFYGTTAG- 460 (543)
Q Consensus 400 ~~~~~~~~~L~~G~--l~iFPEGTtt~g~------~Ll~F~~----~f---a~l~-~--pV~PVaI~~~~~~~~gt~~~- 460 (543)
++.+.|+..|++|. +.||||||+.|-. +.-||.+ .| ..-+ . -+.|.|+....-+-+-.+..
T Consensus 281 kslk~~~~lL~~Gg~~iwIaPsGgRdR~d~~~g~~~papFD~~svd~mR~l~~~s~~ptHfYPlAl~~yDImPPP~~VEk 360 (426)
T PLN02349 281 RTLKEMALLLREGGQLIWIAPSGGRDRPDPLTGEWTPAPFDPSAVDNMRRLTEKSKAPGHFYPLAMLSYDIMPPPPQVEK 360 (426)
T ss_pred HHHHHHHHHHhcCCeEEEEeCCCCCCCCCccCCCccCCCCChHHHHHHHHHHHhcCCCccccchHHHhCccCCCcccccc
Confidence 12344556788874 6799999998844 3568864 22 2222 2 48888886533221111110
Q ss_pred --CcccccchhcccCCCCeEEEEEcccccCCcc---cCCCCCCHHHHHHHHHHHHHHH
Q 042170 461 --GLKCLDPFFFLMNPSPGYTMQLLEGVSGLSM---CQDGNESRFDVANYVQSELGKA 513 (543)
Q Consensus 461 --~~~~~d~~~~l~~P~~~v~V~fL~pi~~~~~---~~~~~~~~~elA~~vq~~Ia~~ 513 (543)
|-+ -...+..+-+.+++-|..++. +.++.+.++++++.+...+.+.
T Consensus 361 eIGE~-------R~v~F~gvGlsvg~EI~~~~~~~~~~~~~e~r~~~t~~~~~~V~~~ 411 (426)
T PLN02349 361 EIGER-------RLVGFTGVGLSVGEEIDFSDITAACEGGAEAREAFTQAAYASVVEQ 411 (426)
T ss_pred ccCce-------eeeeeecceeeeccccchHhhhhhcCChHHHHHHHHHHHHHHHHHH
Confidence 100 001122356677777765322 1112345666777766665543
No 104
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=95.68 E-value=0.0076 Score=60.70 Aligned_cols=41 Identities=12% Similarity=0.062 Sum_probs=31.3
Q ss_pred HHHHHHHHHHh---cCC--ceEEEeCCCCCcchhcccccccCceeeccCC
Q 042170 208 ILVLQEIIKQE---NSG--DVIGISSLNSSLDHYKLFLQQCNEVYLVRST 252 (543)
Q Consensus 208 ~~Kv~~l~~~~---~~~--~~~aygD~~S~~D~~~m~L~~~~~~y~v~p~ 252 (543)
..|..+++.+. +-. ..+|+|| |..|.+ | ++.+++++++-.+
T Consensus 188 ~~K~~al~~l~~~lgi~~~~v~afGD--~~ND~~-M-l~~ag~gvam~Na 233 (264)
T COG0561 188 VSKGYALQRLAKLLGIKLEEVIAFGD--STNDIE-M-LEVAGLGVAMGNA 233 (264)
T ss_pred CchHHHHHHHHHHhCCCHHHeEEeCC--ccccHH-H-HHhcCeeeeccCC
Confidence 35766666554 332 5679999 999999 9 6999999999644
No 105
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=95.61 E-value=0.066 Score=55.55 Aligned_cols=92 Identities=14% Similarity=0.142 Sum_probs=64.0
Q ss_pred cEEEEeCCcHHHHHHHHHhhCCCcEEEeceEE-EeC------eEEeeeecc---C---CCc-HHHHHHHHHHhcCC----
Q 042170 160 KTVAVSNMPQVMIDSFLRDYLDIDLVVGRELK-VFC------GYFVGLMED---K---KKN-ILVLQEIIKQENSG---- 221 (543)
Q Consensus 160 ~~v~VSAsp~~~vepfak~~lG~d~VlgTele-v~~------G~~TG~~~g---~---~~g-~~Kv~~l~~~~~~~---- 221 (543)
..++-+.+++.+.+.+ ++ .|+..+-|-+.- +.+ -|.||-|.. . +|. ..-++.|.+.+..+
T Consensus 150 Ep~~w~~~~~~~~~~~-~~-~g~~~~~GgRf~H~l~~~~~~~~~~~~~~~~~~~~~~~~~dKg~A~~~L~~~y~~~~~~~ 227 (302)
T PRK12702 150 EIFSYSGDPARLREAF-AQ-QEANLTQHLLRLHQLHFSDLPQWYLTGWMQPTLAAEPNSLPGEQAVQLLLDCYQRHLGPI 227 (302)
T ss_pred cceEecCCHHHHHHHH-HH-cCCeEEecCceEEecccccccccccccccccccccccCCCCHHHHHHHHHHHHHhccCCc
Confidence 6666788888786665 44 699988888764 322 256887653 1 343 34445566666543
Q ss_pred ceEEEeCCCCCcchhcccccccCceeeccCCcccCCc
Q 042170 222 DVIGISSLNSSLDHYKLFLQQCNEVYLVRSTDKRSWQ 258 (543)
Q Consensus 222 ~~~aygD~~S~~D~~~m~L~~~~~~y~v~p~~~~~w~ 258 (543)
..+|+|| |..|.+ | |+.|+.+.+|+ ...+.|+
T Consensus 228 ~tiaLGD--spND~~-m-Le~~D~~vvi~-~~~~~~~ 259 (302)
T PRK12702 228 KALGIGC--SPPDLA-F-LRWSEQKVVLP-SPIADSL 259 (302)
T ss_pred eEEEecC--ChhhHH-H-HHhCCeeEEec-CCCCCCc
Confidence 6789999 999999 9 89999999994 4445555
No 106
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=95.54 E-value=0.25 Score=50.95 Aligned_cols=93 Identities=14% Similarity=0.129 Sum_probs=52.2
Q ss_pred cCHHHHHHHH---hCC-cEEEEeCCcHHHHHHHHHhhCCCcEEEeceEEEeCeEEeeeeccCCC-cHHHHHHHHHHhcCC
Q 042170 147 VGLEIFEVLK---KGG-KTVAVSNMPQVMIDSFLRDYLDIDLVVGRELKVFCGYFVGLMEDKKK-NILVLQEIIKQENSG 221 (543)
Q Consensus 147 l~~ea~~~~~---~~g-~~v~VSAsp~~~vepfak~~lG~d~VlgTelev~~G~~TG~~~g~~~-g~~Kv~~l~~~~~~~ 221 (543)
+.|.+.+.+. +.| ++.+||.++..+++.+++. ++.+... ....+ ++|.-.+... .++=...+.+.++-.
T Consensus 145 l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~-~~~~~~~-~~~~~----v~~~~~~~~KP~p~~~~~a~~~~~~~ 218 (286)
T PLN02779 145 LRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNT-LLGPERA-QGLDV----FAGDDVPKKKPDPDIYNLAAETLGVD 218 (286)
T ss_pred chhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-hcccccc-CceEE----EeccccCCCCCCHHHHHHHHHHhCcC
Confidence 5566666554 667 8889999999999988875 3221111 11111 1222111111 233344444444433
Q ss_pred --ceEEEeCCCCCcchhcccccccCceeec
Q 042170 222 --DVIGISSLNSSLDHYKLFLQQCNEVYLV 249 (543)
Q Consensus 222 --~~~aygD~~S~~D~~~m~L~~~~~~y~v 249 (543)
..+.+|| |..|.. . -.-+|-..+.
T Consensus 219 p~~~l~IGD--s~~Di~-a-A~~aG~~~i~ 244 (286)
T PLN02779 219 PSRCVVVED--SVIGLQ-A-AKAAGMRCIV 244 (286)
T ss_pred hHHEEEEeC--CHHhHH-H-HHHcCCEEEE
Confidence 5778999 888988 6 5567755444
No 107
>COG1560 HtrB Lauroyl/myristoyl acyltransferase [Cell envelope biogenesis, outer membrane]
Probab=95.54 E-value=0.096 Score=54.79 Aligned_cols=161 Identities=14% Similarity=0.113 Sum_probs=100.5
Q ss_pred EEEEeccCCCCccccCcccccCCCceEEEecCCCCCcHHHHHHhhcCce-eEEeee--hhhhhhhhh----cCceeEeec
Q 042170 324 RFTVITKPKTSRSFQNSRDCQKTERTLYVCNHRTLLDPLYLSFALKKNL-TAVTYS--LSRMSEILA----PIKTVRMTR 396 (543)
Q Consensus 324 rv~v~G~~~~~~~~~~~~~~~~~~~~l~VaNH~S~LD~~vl~a~l~~~~-~~va~s--l~~v~~~l~----~i~tv~v~R 396 (543)
++.++|.++.... .++++|+|+++-|...+|..........+. ..+... ...+.+++. ..|.-.+.+
T Consensus 106 ~~~v~g~e~l~e~------l~~~~gvIl~~~H~gn~E~~~~~l~~~~~~~~~~yrp~~np~ld~~i~~~R~r~~~~~~~~ 179 (308)
T COG1560 106 RVEVEGLEHLEEA------LANGRGVILVTPHFGNWELGGRALAQQGPKVTAMYRPPKNPLLDWLITRGRERFGGRLLPR 179 (308)
T ss_pred eeeecCHHHHHHH------HHcCCCEEEEecCcchHHHHHHHHHHhCCCeeEEecCCCCHHHHHHHHHHHHhcCCcccCC
Confidence 5888898876411 123579999999999999999888754553 455431 122222222 123333433
Q ss_pred CchHHHHHHHHHHhCCC-eEEecCccccCCCc-ccccc--h-----hhhhcC----CceEEEEEEeccccccccccCCcc
Q 042170 397 NRDQDAKLVKSLLNQGD-LVICPEGTTCREPY-LLRFS--P-----LFAEMS----DNIIPVASNSHVTMFYGTTAGGLK 463 (543)
Q Consensus 397 ~r~~~~~~~~~~L~~G~-l~iFPEGTtt~g~~-Ll~F~--~-----~fa~l~----~pV~PVaI~~~~~~~~gt~~~~~~ 463 (543)
+.++.+.+.+.|++|. +.+-|+=..+.+.+ -.||= . +.+.++ .+|+|+......
T Consensus 180 -~~~~ir~li~~Lk~G~~v~~lpDqd~~~~~~vfvpFFg~~a~T~t~~~~LA~~~~a~vip~~~~r~~------------ 246 (308)
T COG1560 180 -KGEGIRQLIKALKQGEAVGYLPDQDYGPGESVFVPFFGVPAATTTGPAKLARLTGAAVVPVFPVRNP------------ 246 (308)
T ss_pred -CchhHHHHHHHHhcCCeEEEecCcccCCCCCeEeccCCCcccccchHHHHHHHhCCCEEEEEEEEeC------------
Confidence 2368899999999998 77999999888876 45552 1 223222 389999887632
Q ss_pred cccchhcccCCCCeEEEEEcccccCCcccCCCCCCHHHHHHHHHHHHHHHhCCCc
Q 042170 464 CLDPFFFLMNPSPGYTMQLLEGVSGLSMCQDGNESRFDVANYVQSELGKALGFEC 518 (543)
Q Consensus 464 ~~d~~~~l~~P~~~v~V~fL~pi~~~~~~~~~~~~~~elA~~vq~~Ia~~Lg~~~ 518 (543)
+...|++++.||..-. ..+|-.+.|++.-+.|.+...-..
T Consensus 247 ----------~g~~y~l~i~p~~~~~-----~~~D~~~~a~~mn~~~E~~I~~~P 286 (308)
T COG1560 247 ----------DGSGYTLHIHPPMTDD-----PSEDVEADAQRMNDFVEKWIRAHP 286 (308)
T ss_pred ----------CCCeEEEEEeccccCC-----CCCCHHHHHHHHHHHHHHHHHcCh
Confidence 1225999999866542 345566666555555554443333
No 108
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=95.44 E-value=0.066 Score=49.96 Aligned_cols=83 Identities=13% Similarity=0.229 Sum_probs=59.1
Q ss_pred HHHHHHhCC-cEEEEeCCcHHHHHHHHHhhCCCcEEEeceEEEeCeEEeeeeccCCCcHHHHHHHHHHhcCC--ceEEEe
Q 042170 151 IFEVLKKGG-KTVAVSNMPQVMIDSFLRDYLDIDLVVGRELKVFCGYFVGLMEDKKKNILVLQEIIKQENSG--DVIGIS 227 (543)
Q Consensus 151 a~~~~~~~g-~~v~VSAsp~~~vepfak~~lG~d~VlgTelev~~G~~TG~~~g~~~g~~Kv~~l~~~~~~~--~~~ayg 227 (543)
+++.+++.| +++++|+.+...++.++++ +|++..+. |. .+. .+-..++.+.++-. ..+.+|
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~-~gi~~~~~-----------~~---~~k-~~~~~~~~~~~~~~~~~~~~vG 99 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKT-LGITHLYQ-----------GQ---SNK-LIAFSDILEKLALAPENVAYIG 99 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHH-cCCCEEEe-----------cc---cch-HHHHHHHHHHcCCCHHHEEEEC
Confidence 566777778 8889999999999999986 89986532 21 111 22333333333423 677999
Q ss_pred CCCCCcchhcccccccCceeeccCCc
Q 042170 228 SLNSSLDHYKLFLQQCNEVYLVRSTD 253 (543)
Q Consensus 228 D~~S~~D~~~m~L~~~~~~y~v~p~~ 253 (543)
| |..|.+ | ++.++.+|.++++.
T Consensus 100 D--s~~D~~-~-~~~ag~~~~v~~~~ 121 (154)
T TIGR01670 100 D--DLIDWP-V-MEKVGLSVAVADAH 121 (154)
T ss_pred C--CHHHHH-H-HHHCCCeEecCCcC
Confidence 9 999999 9 79999999998643
No 109
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=95.20 E-value=0.28 Score=47.51 Aligned_cols=101 Identities=11% Similarity=0.046 Sum_probs=60.0
Q ss_pred HHHHHhCC-cEEEEeCCcHHHHHHHHHhhCCCcEEEeceE-----EEe-CeEEeeee-ccCCCcHHHHHHHHHHhcCC-c
Q 042170 152 FEVLKKGG-KTVAVSNMPQVMIDSFLRDYLDIDLVVGREL-----KVF-CGYFVGLM-EDKKKNILVLQEIIKQENSG-D 222 (543)
Q Consensus 152 ~~~~~~~g-~~v~VSAsp~~~vepfak~~lG~d~VlgTel-----ev~-~G~~TG~~-~g~~~g~~Kv~~l~~~~~~~-~ 222 (543)
++-+++.+ .+++||+-...++.|.+..++|-|.+-+-++ .+. +|.-.=.. +...||.-|-.-++++.... .
T Consensus 82 ~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG~dK~~vI~~l~e~~e~ 161 (220)
T COG4359 82 VEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQFGHDKSSVIHELSEPNES 161 (220)
T ss_pred HHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCceeeecCCccccCCCcchhHHHhhcCCce
Confidence 34445555 9999999999999999988777665544444 432 33321111 22335767777777775544 4
Q ss_pred eEEEeCCCCCcchhcccccccCce----eeccCCcccC
Q 042170 223 VIGISSLNSSLDHYKLFLQQCNEV----YLVRSTDKRS 256 (543)
Q Consensus 223 ~~aygD~~S~~D~~~m~L~~~~~~----y~v~p~~~~~ 256 (543)
.+-.|| |-+|+. = -..|+.. +++|..++++
T Consensus 162 ~fy~GD--svsDls-a-aklsDllFAK~~L~nyc~eqn 195 (220)
T COG4359 162 IFYCGD--SVSDLS-A-AKLSDLLFAKDDLLNYCREQN 195 (220)
T ss_pred EEEecC--Cccccc-H-hhhhhhHhhHHHHHHHHHHcC
Confidence 445699 777764 3 2344443 4445444444
No 110
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=94.98 E-value=0.55 Score=45.59 Aligned_cols=73 Identities=19% Similarity=0.139 Sum_probs=44.0
Q ss_pred hcCHHHHHHHHhCC-c--EEEEeCCcHHHHHHHHHhhCCCc----EEEeceEEEeCeEEeeeeccCCCcHHHHHHHHHHh
Q 042170 146 NVGLEIFEVLKKGG-K--TVAVSNMPQVMIDSFLRDYLDID----LVVGRELKVFCGYFVGLMEDKKKNILVLQEIIKQE 218 (543)
Q Consensus 146 ~l~~ea~~~~~~~g-~--~v~VSAsp~~~vepfak~~lG~d----~VlgTelev~~G~~TG~~~g~~~g~~Kv~~l~~~~ 218 (543)
...+++++.+++.+ + ++++|..+....+..+++ +|+. .|+..+ .+| ...+ ..+=-+.+.+.+
T Consensus 99 ~~~~~~~~~L~~l~~~~~l~ilTNg~~~~~~~~l~~-~gl~~~Fd~v~~s~-------~~g-~~KP--~~~~f~~~~~~~ 167 (229)
T COG1011 99 PDYPEALEALKELGKKYKLGILTNGARPHQERKLRQ-LGLLDYFDAVFISE-------DVG-VAKP--DPEIFEYALEKL 167 (229)
T ss_pred ccChhHHHHHHHHHhhccEEEEeCCChHHHHHHHHH-cCChhhhheEEEec-------ccc-cCCC--CcHHHHHHHHHc
Confidence 47788888888543 4 789998887788878886 7743 333333 122 1112 223344555555
Q ss_pred cCC--ceEEEeCC
Q 042170 219 NSG--DVIGISSL 229 (543)
Q Consensus 219 ~~~--~~~aygD~ 229 (543)
+-. ..+-.|||
T Consensus 168 g~~p~~~l~VgD~ 180 (229)
T COG1011 168 GVPPEEALFVGDS 180 (229)
T ss_pred CCCcceEEEECCC
Confidence 533 57789993
No 111
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=94.73 E-value=0.093 Score=60.41 Aligned_cols=84 Identities=18% Similarity=0.116 Sum_probs=68.5
Q ss_pred hcCHHHHHHHH---hCC-cEEEEeCCcHHHHHHHHHhhCCCcEEEeceEEEeCeEEeeeeccCCC-cHHHHHHHHHHhcC
Q 042170 146 NVGLEIFEVLK---KGG-KTVAVSNMPQVMIDSFLRDYLDIDLVVGRELKVFCGYFVGLMEDKKK-NILVLQEIIKQENS 220 (543)
Q Consensus 146 ~l~~ea~~~~~---~~g-~~v~VSAsp~~~vepfak~~lG~d~VlgTelev~~G~~TG~~~g~~~-g~~Kv~~l~~~~~~ 220 (543)
-++|++.++++ +.| +++++|.--...++.++++ +|+|++.+ ++ -++|.+.++++-..
T Consensus 446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~-lGI~~v~a-----------------~~~PedK~~~v~~lq~~ 507 (675)
T TIGR01497 446 IVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAE-AGVDDFIA-----------------EATPEDKIALIRQEQAE 507 (675)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCEEEc-----------------CCCHHHHHHHHHHHHHc
Confidence 47888887666 678 8999999999999999997 99987543 34 36799999988544
Q ss_pred C-ceEEEeCCCCCcchhcccccccCceeeccC
Q 042170 221 G-DVIGISSLNSSLDHYKLFLQQCNEVYLVRS 251 (543)
Q Consensus 221 ~-~~~aygD~~S~~D~~~m~L~~~~~~y~v~p 251 (543)
. ....+|| +..|.| + |+.|+.+.++++
T Consensus 508 g~~VamvGD--G~NDap-A-L~~AdvGiAm~~ 535 (675)
T TIGR01497 508 GKLVAMTGD--GTNDAP-A-LAQADVGVAMNS 535 (675)
T ss_pred CCeEEEECC--CcchHH-H-HHhCCEeEEeCC
Confidence 3 3447799 999999 9 899999999986
No 112
>PRK10671 copA copper exporting ATPase; Provisional
Probab=94.53 E-value=0.12 Score=61.11 Aligned_cols=85 Identities=16% Similarity=0.209 Sum_probs=64.9
Q ss_pred hcCHHHHHHHH---hCC-cEEEEeCCcHHHHHHHHHhhCCCcEEEeceEEEeCeEEeeeeccCCCcHHHHHHHHHHhcCC
Q 042170 146 NVGLEIFEVLK---KGG-KTVAVSNMPQVMIDSFLRDYLDIDLVVGRELKVFCGYFVGLMEDKKKNILVLQEIIKQENSG 221 (543)
Q Consensus 146 ~l~~ea~~~~~---~~g-~~v~VSAsp~~~vepfak~~lG~d~VlgTelev~~G~~TG~~~g~~~g~~Kv~~l~~~~~~~ 221 (543)
.++|++.+.++ +.| +++++|...+..++.++++ +|++.+.+ +.. -+.|.+.++++....
T Consensus 650 ~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~-lgi~~~~~-----------~~~-----p~~K~~~i~~l~~~~ 712 (834)
T PRK10671 650 PLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKE-AGIDEVIA-----------GVL-----PDGKAEAIKRLQSQG 712 (834)
T ss_pred cchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cCCCEEEe-----------CCC-----HHHHHHHHHHHhhcC
Confidence 36776666554 678 8889999999999999986 99986433 111 256999888875443
Q ss_pred -ceEEEeCCCCCcchhcccccccCceeeccC
Q 042170 222 -DVIGISSLNSSLDHYKLFLQQCNEVYLVRS 251 (543)
Q Consensus 222 -~~~aygD~~S~~D~~~m~L~~~~~~y~v~p 251 (543)
..+.+|| +..|.| + |+.|+....+..
T Consensus 713 ~~v~~vGD--g~nD~~-a-l~~Agvgia~g~ 739 (834)
T PRK10671 713 RQVAMVGD--GINDAP-A-LAQADVGIAMGG 739 (834)
T ss_pred CEEEEEeC--CHHHHH-H-HHhCCeeEEecC
Confidence 5668999 999999 9 899999888764
No 113
>PF03279 Lip_A_acyltrans: Bacterial lipid A biosynthesis acyltransferase; InterPro: IPR004960 Bacterial lipopolysachharides (LPS) are glycolipids that make up the outer monolayer of the outer membranes of most Gram-negative bacteria. Though LPS moleculesare variable, they all show the same general features: an outer polysaccharide which is attached to the lipid component, termed lipid A []. The polysaccharide component consists of a variable repeat-structure polysaccharide known as the O-antigen, and a highly conserved short core oligosaccharide which connects the O-antigen to lipid A. Lipid A is a glucosamine-based phospholipid that makes up the membrane anchor region of LPS []. The structure of lipid A is relatively invariant between species, presumably reflecting its fundamental role in membrane integrity. Recognition of lipid A by the innate immune system can lead to a response even at picomolar levels. In some genera, such as Neisseria and Haemophilus, lipooligosaccharides (LOS) are the predominant glycolipids []. These are analogous to LPS except that they lack O-antigens, with the LOS oligosaccharide structures limited to 10 saccharide units. The bacterial lipid A biosynthesis protein, or lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 2.3.1 from EC, transfers myristate or laurate, activated on ACP, to the lipid IVA moiety of (KDO)2-(lauroyl)-lipid IVA during lipopolysaccharide core biosynthesis.; GO: 0016746 transferase activity, transferring acyl groups, 0009244 lipopolysaccharide core region biosynthetic process, 0016021 integral to membrane
Probab=94.43 E-value=0.33 Score=49.87 Aligned_cols=158 Identities=9% Similarity=0.121 Sum_probs=95.3
Q ss_pred CeEEEEeccCCCCccccCcccccCCCceEEEecCCCCCcHHHHHHhh-cCceeEEeeeh--hhhhhhh----hcCceeEe
Q 042170 322 GLRFTVITKPKTSRSFQNSRDCQKTERTLYVCNHRTLLDPLYLSFAL-KKNLTAVTYSL--SRMSEIL----APIKTVRM 394 (543)
Q Consensus 322 Gvrv~v~G~~~~~~~~~~~~~~~~~~~~l~VaNH~S~LD~~vl~a~l-~~~~~~va~sl--~~v~~~l----~~i~tv~v 394 (543)
..++++.|.+..... ....+|+|+++.|....+........ ..++..+.... ..+.+++ ...|.-.+
T Consensus 102 ~~~~~~~g~e~l~~a------~~~g~gvIl~t~H~GnwE~~~~~l~~~~~~~~~i~~~~~n~~~~~~~~~~R~~~g~~~i 175 (295)
T PF03279_consen 102 KKRVEIEGEEHLEAA------LAEGRGVILLTGHFGNWELAGRALARRGPPVAVIYRPQKNPYIDRLLNKLRERFGIELI 175 (295)
T ss_pred ceEEEEECHHHHHHH------HhcCCCCEEeCcCcChHHHHHHHHHhhCCceEEEecCCccHhHHHHHHHHHHhcCCeEe
Confidence 346788887765411 11357999999999999986655443 34455555432 2233332 23344445
Q ss_pred ecCchHHHHHHHHHHhCCC-eEEecCccccCC-Cccccc-------chhhhhcC----CceEEEEEEeccccccccccCC
Q 042170 395 TRNRDQDAKLVKSLLNQGD-LVICPEGTTCRE-PYLLRF-------SPLFAEMS----DNIIPVASNSHVTMFYGTTAGG 461 (543)
Q Consensus 395 ~R~r~~~~~~~~~~L~~G~-l~iFPEGTtt~g-~~Ll~F-------~~~fa~l~----~pV~PVaI~~~~~~~~gt~~~~ 461 (543)
..+ +...++.+.|++|. +++.+......+ .--.+| ..+++.++ .||+||.+..... +
T Consensus 176 ~~~--~~~~~~~~~Lk~g~~v~~l~Dq~~~~~~~~~v~FfG~~a~~~~g~a~lA~~~~apvvp~~~~r~~~--------~ 245 (295)
T PF03279_consen 176 PKG--EGIRELIRALKEGGIVGLLGDQDPGKKDGVFVPFFGRPASTPTGPARLARKTGAPVVPVFAYREPD--------G 245 (295)
T ss_pred cch--hhHHHHHHHhccCCEEEEEECCCCCCCCceEEeECCeecccccHHHHHHHHhCCcEEEEEEEEeCC--------C
Confidence 433 34788889999998 778888765554 233355 22444433 4999999876431 1
Q ss_pred cccccchhcccCCCCeEEEEEcccccCCcccCCCCCCHHHHHHHHHHHHHHHh
Q 042170 462 LKCLDPFFFLMNPSPGYTMQLLEGVSGLSMCQDGNESRFDVANYVQSELGKAL 514 (543)
Q Consensus 462 ~~~~d~~~~l~~P~~~v~V~fL~pi~~~~~~~~~~~~~~elA~~vq~~Ia~~L 514 (543)
..|++++.+|++.+. .++.++++++.-+.+.+..
T Consensus 246 --------------~~~~~~i~~~~~~~~-----~~~~~~~~~~~~~~lE~~I 279 (295)
T PF03279_consen 246 --------------SHYRIEIEPPLDFPS-----SEDIEELTQRYNDRLEEWI 279 (295)
T ss_pred --------------CEEEEEEeecccCCc-----cchHHHHHHHHHHHHHHHH
Confidence 148899999887632 3355666666555555544
No 114
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=94.41 E-value=0.34 Score=44.25 Aligned_cols=74 Identities=20% Similarity=0.291 Sum_probs=42.0
Q ss_pred HHHHHHHhCC-cEEEEeCCcHHHHHHHHHhhCC--CcEEEeceEEEeCeEEeeeeccCCCcHHHHHHHHHHhcCC-ceEE
Q 042170 150 EIFEVLKKGG-KTVAVSNMPQVMIDSFLRDYLD--IDLVVGRELKVFCGYFVGLMEDKKKNILVLQEIIKQENSG-DVIG 225 (543)
Q Consensus 150 ea~~~~~~~g-~~v~VSAsp~~~vepfak~~lG--~d~VlgTelev~~G~~TG~~~g~~~g~~Kv~~l~~~~~~~-~~~a 225 (543)
+.++.+++.| +..++|++++.+++.+++.+++ ++.+++.+ . +| ..+ .++-...+.+.++-. ..+-
T Consensus 71 e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~l~~~f~~i~~~~-----~--~~--~Kp--~~~~~~~~~~~~~~~~~~l~ 139 (154)
T TIGR01549 71 DLLKRLKEAGIKLGIISNGSLRAQKLLLRKHLGDYFDLILGSD-----E--FG--AKP--EPEIFLAALESLGLPPEVLH 139 (154)
T ss_pred HHHHHHHHCcCeEEEEeCCchHHHHHHHHHHHHhcCcEEEecC-----C--CC--CCc--CHHHHHHHHHHcCCCCCEEE
Confidence 3444555677 8889999999999998875311 22232211 1 11 111 133444444444422 5678
Q ss_pred EeCCCCCcchh
Q 042170 226 ISSLNSSLDHY 236 (543)
Q Consensus 226 ygD~~S~~D~~ 236 (543)
+|| |..|..
T Consensus 140 iGD--s~~Di~ 148 (154)
T TIGR01549 140 VGD--NLNDIE 148 (154)
T ss_pred EeC--CHHHHH
Confidence 999 877765
No 115
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=94.35 E-value=1.2 Score=44.23 Aligned_cols=18 Identities=17% Similarity=0.442 Sum_probs=14.9
Q ss_pred eEEEEEcCCccccCCCch
Q 042170 64 RTLIFNVEGFLLKSSSLF 81 (543)
Q Consensus 64 ~~a~FD~DGTLl~~~s~f 81 (543)
++++||+||||+.+.+.+
T Consensus 11 k~iiFDlDGTL~D~~~~~ 28 (238)
T PRK10748 11 SALTFDLDDTLYDNRPVI 28 (238)
T ss_pred eeEEEcCcccccCChHHH
Confidence 689999999999775543
No 116
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=93.95 E-value=0.42 Score=47.34 Aligned_cols=36 Identities=19% Similarity=0.223 Sum_probs=26.3
Q ss_pred cCHHHHHHHH---hCC-cEEEEeCCcHHHHHHHHHhhCCCc
Q 042170 147 VGLEIFEVLK---KGG-KTVAVSNMPQVMIDSFLRDYLDID 183 (543)
Q Consensus 147 l~~ea~~~~~---~~g-~~v~VSAsp~~~vepfak~~lG~d 183 (543)
..|.+.+.+. +.| ...++|+|++..++..++. +|..
T Consensus 87 ~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~-~gl~ 126 (221)
T COG0637 87 PIPGVVELLEQLKARGIPLAVASSSPRRAAERVLAR-LGLL 126 (221)
T ss_pred CCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHH-ccCh
Confidence 4555555444 566 6777899999999999976 7754
No 117
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=93.69 E-value=0.26 Score=47.26 Aligned_cols=81 Identities=11% Similarity=0.226 Sum_probs=56.3
Q ss_pred HHHHHHhCC-cEEEEeCCcHHHHHHHHHhhCCCcEEEeceEEEeCeEEeeeeccCCCcHHHHHHHHHHhcCC--ceEEEe
Q 042170 151 IFEVLKKGG-KTVAVSNMPQVMIDSFLRDYLDIDLVVGRELKVFCGYFVGLMEDKKKNILVLQEIIKQENSG--DVIGIS 227 (543)
Q Consensus 151 a~~~~~~~g-~~v~VSAsp~~~vepfak~~lG~d~VlgTelev~~G~~TG~~~g~~~g~~Kv~~l~~~~~~~--~~~ayg 227 (543)
+++.+++.| +++++|..+...+++++++ +|++.+. .|. .+ -.+.+..+.+.++-. ..+.+|
T Consensus 56 ~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~-lgl~~~f-----------~g~---~~-k~~~l~~~~~~~gl~~~ev~~VG 119 (183)
T PRK09484 56 GIRCLLTSGIEVAIITGRKSKLVEDRMTT-LGITHLY-----------QGQ---SN-KLIAFSDLLEKLAIAPEQVAYIG 119 (183)
T ss_pred HHHHHHHCCCEEEEEeCCCcHHHHHHHHH-cCCceee-----------cCC---Cc-HHHHHHHHHHHhCCCHHHEEEEC
Confidence 445556677 7888999999999999987 8987542 221 11 023334444444433 567899
Q ss_pred CCCCCcchhcccccccCceeeccC
Q 042170 228 SLNSSLDHYKLFLQQCNEVYLVRS 251 (543)
Q Consensus 228 D~~S~~D~~~m~L~~~~~~y~v~p 251 (543)
| |..|.+ + ++.|+..+++++
T Consensus 120 D--s~~D~~-~-a~~aG~~~~v~~ 139 (183)
T PRK09484 120 D--DLIDWP-V-MEKVGLSVAVAD 139 (183)
T ss_pred C--CHHHHH-H-HHHCCCeEecCC
Confidence 9 999999 9 799999988764
No 118
>COG2121 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=93.67 E-value=1.9 Score=42.54 Aligned_cols=148 Identities=18% Similarity=0.157 Sum_probs=79.3
Q ss_pred CCceEEEecCCCCC-cHHHHHHhhcCceeEEeeehhhhhhhhh----cCceeEee----cCchHHHHHHHHHHhCCC-eE
Q 042170 346 TERTLYVCNHRTLL-DPLYLSFALKKNLTAVTYSLSRMSEILA----PIKTVRMT----RNRDQDAKLVKSLLNQGD-LV 415 (543)
Q Consensus 346 ~~~~l~VaNH~S~L-D~~vl~a~l~~~~~~va~sl~~v~~~l~----~i~tv~v~----R~r~~~~~~~~~~L~~G~-l~ 415 (543)
++|.|+.+=|-=.. -|++-.-. +++.++ -|-++-.|+++ .+|---|. ++..+...+|.+.|++|. ++
T Consensus 45 ~~p~I~afWHg~l~l~p~~~~~~--~~~~am-vS~s~DGEliA~~l~kfG~~~IRGSs~Kgg~~Alr~l~k~Lk~G~~i~ 121 (214)
T COG2121 45 EKPGIVAFWHGQLALGPFAFPKG--KKIYAM-VSPSRDGELIARLLEKFGLRVIRGSSNKGGISALRALLKALKQGKSIA 121 (214)
T ss_pred cCCeEEEEeccccccchhhccCC--CcEEEE-EcCCcCHHHHHHHHHHcCceEEeccCCcchHHHHHHHHHHHhCCCcEE
Confidence 67999999886332 22221111 222222 22233344443 33432222 122234566778899994 99
Q ss_pred EecCccccCCCcccccchhhhhc-CCceEEEEEEeccccccccccCCcccccchhcccCCCCeEEEEEcccccCCcccCC
Q 042170 416 ICPEGTTCREPYLLRFSPLFAEM-SDNIIPVASNSHVTMFYGTTAGGLKCLDPFFFLMNPSPGYTMQLLEGVSGLSMCQD 494 (543)
Q Consensus 416 iFPEGTtt~g~~Ll~F~~~fa~l-~~pV~PVaI~~~~~~~~gt~~~~~~~~d~~~~l~~P~~~v~V~fL~pi~~~~~~~~ 494 (543)
+-|+|-...-......--..+.. ..||.||++.+.+ .+.--| | |=+ -+=.|+..+.+..++|+..+
T Consensus 122 itpDgPkGp~~~~~~Gii~LA~~sg~pi~pv~~~~sr-~~~lKs---W---Dk~-~IP~PFgk~~i~~gePi~~~----- 188 (214)
T COG2121 122 ITPDGPKGPVHKIGDGIIALAQKSGVPIIPVGVATSR-CWRLKT---W---DKT-IIPLPFGKIKIVLGEPIEVD----- 188 (214)
T ss_pred EcCCCCCCCceeccchhhHhhHhcCCCeEEEEEeeee-eeeecc---c---ccc-cccCccceeEEEecCceeec-----
Confidence 99998654322222222122333 3599999999987 222112 2 210 12247778999999999873
Q ss_pred CCCCHHHHHHHHHHH
Q 042170 495 GNESRFDVANYVQSE 509 (543)
Q Consensus 495 ~~~~~~elA~~vq~~ 509 (543)
.+++.+++-++.|+.
T Consensus 189 ~D~~~~~l~~~~~~~ 203 (214)
T COG2121 189 ADKDKEELEEKRQEV 203 (214)
T ss_pred ccccHHHHHHHHHHH
Confidence 345666666555443
No 119
>PRK06628 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=93.38 E-value=1.2 Score=46.01 Aligned_cols=133 Identities=9% Similarity=0.093 Sum_probs=78.2
Q ss_pred EEEEeccCCCCccccCcccccCCCceEEEecCCCCCcHHHHHHhh-cCceeEEeeeh--hhhhhhhh----cCceeEeec
Q 042170 324 RFTVITKPKTSRSFQNSRDCQKTERTLYVCNHRTLLDPLYLSFAL-KKNLTAVTYSL--SRMSEILA----PIKTVRMTR 396 (543)
Q Consensus 324 rv~v~G~~~~~~~~~~~~~~~~~~~~l~VaNH~S~LD~~vl~a~l-~~~~~~va~sl--~~v~~~l~----~i~tv~v~R 396 (543)
++++.|.+.... . .++|+|+++-|...+|........ ..++..+.... ..+.+++. ..|.-.+.
T Consensus 99 ~v~~~g~e~l~~-------~-~gkgvIl~t~H~GnwE~~~~~l~~~~~~~~~vyr~~~n~~~d~~~~~~R~~~g~~~i~- 169 (290)
T PRK06628 99 RIEIIGIENIKK-------L-EGQPFLLFSGHFANWDISLKILHKFYPKVAVIYRKANNPYVNKLVNESRAGDKLRLIP- 169 (290)
T ss_pred eEEEeCHHHHHH-------h-cCCcEEEEEecchHHHHHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHhcCCceec-
Confidence 577788766431 1 257999999999999987644333 23566665432 22333332 22333342
Q ss_pred CchHHHHHHHHHHhCCC-eEEecCccccCCCccccc--c-----hhhhhcC----CceEEEEEEeccccccccccCCccc
Q 042170 397 NRDQDAKLVKSLLNQGD-LVICPEGTTCREPYLLRF--S-----PLFAEMS----DNIIPVASNSHVTMFYGTTAGGLKC 464 (543)
Q Consensus 397 ~r~~~~~~~~~~L~~G~-l~iFPEGTtt~g~~Ll~F--~-----~~fa~l~----~pV~PVaI~~~~~~~~gt~~~~~~~ 464 (543)
.+.+..+++-+.|++|. +.+.|---.. ++.-.+| + .+.+.++ .||+|+.+....
T Consensus 170 ~~~~~~r~l~k~Lk~g~~v~il~Dq~~~-~gv~v~FFG~~a~t~~~~a~LA~~~~apvv~~~~~r~~------------- 235 (290)
T PRK06628 170 KGPEGSRALVRAIKESESIVMLVDQKMN-DGIEVPFLGHPAMTASAIAKIALQYKYPIIPCQIIRTK------------- 235 (290)
T ss_pred CCCchHHHHHHHHHcCCeEEEEecccCC-CCeeeecCCCccccchHHHHHHHHHCCCEEEEEEEECC-------------
Confidence 12346888899999997 6677554432 2223355 1 2333333 499999886531
Q ss_pred ccchhcccCCCCeEEEEEcccccCC
Q 042170 465 LDPFFFLMNPSPGYTMQLLEGVSGL 489 (543)
Q Consensus 465 ~d~~~~l~~P~~~v~V~fL~pi~~~ 489 (543)
...|+++|.+|++..
T Consensus 236 ----------~~~~~i~~~~~~~~~ 250 (290)
T PRK06628 236 ----------GSYFKVIVHPQLKFE 250 (290)
T ss_pred ----------CCeEEEEEcCCCCCC
Confidence 114889998888753
No 120
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=93.32 E-value=0.2 Score=56.66 Aligned_cols=84 Identities=15% Similarity=0.128 Sum_probs=63.1
Q ss_pred HhcCHHHHHHHH---hCC-cEEEEeCCcHHHHHHHHHhhCCCcEEEeceEEEeCeEEeeeeccCCC-cHHHHHHHHHHhc
Q 042170 145 ENVGLEIFEVLK---KGG-KTVAVSNMPQVMIDSFLRDYLDIDLVVGRELKVFCGYFVGLMEDKKK-NILVLQEIIKQEN 219 (543)
Q Consensus 145 e~l~~ea~~~~~---~~g-~~v~VSAsp~~~vepfak~~lG~d~VlgTelev~~G~~TG~~~g~~~-g~~Kv~~l~~~~~ 219 (543)
+.++|++.+.++ +.| +++++|+.++..++.++++ +|+| +|. ++ .+.|.+.++++..
T Consensus 404 d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~-lgi~------------~~~------~~~p~~K~~~v~~l~~ 464 (562)
T TIGR01511 404 DQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKE-LGIN------------VRA------EVLPDDKAALIKELQE 464 (562)
T ss_pred ccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHH-cCCc------------EEc------cCChHHHHHHHHHHHH
Confidence 347777666555 678 8889999999999999986 8996 121 12 3578888887754
Q ss_pred CC-ceEEEeCCCCCcchhcccccccCceeeccC
Q 042170 220 SG-DVIGISSLNSSLDHYKLFLQQCNEVYLVRS 251 (543)
Q Consensus 220 ~~-~~~aygD~~S~~D~~~m~L~~~~~~y~v~p 251 (543)
+. ..+.+|| +..|.| + ++.++-+..+..
T Consensus 465 ~~~~v~~VGD--g~nD~~-a-l~~A~vgia~g~ 493 (562)
T TIGR01511 465 KGRVVAMVGD--GINDAP-A-LAQADVGIAIGA 493 (562)
T ss_pred cCCEEEEEeC--CCccHH-H-HhhCCEEEEeCC
Confidence 43 5668899 999999 9 799997766653
No 121
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=93.10 E-value=0.76 Score=45.80 Aligned_cols=171 Identities=17% Similarity=0.134 Sum_probs=89.3
Q ss_pred CcCeEEEEEcCCccccCCCchHHHHHHHHhhcchHHHHHHHHHHHHHHhcccchhHHHHHHHHhcCcccchhH-HHHhhc
Q 042170 61 VSERTLIFNVEGFLLKSSSLFPYFMLVAFEAGGLIRAFLLFILYPLICLAGEEMGLKIMVMVSFFWVKKDNFR-VGRAVL 139 (543)
Q Consensus 61 ~~~~~a~FD~DGTLl~~~s~fp~f~~~a~~~~~~~r~~~ll~~~p~~~~l~~~~~~k~~~~~~f~G~~~~~~~-va~avl 139 (543)
-.+.+++||||.||+..+|-- + +.-+.+.--+.--+.-.||--++ ++...++|-...=-|.+++++. +-|. +
T Consensus 11 ~~ril~~FDFD~TIid~dSD~-w---Vv~~lp~~~l~~qL~~t~p~~~W--ne~M~rv~k~Lheqgv~~~~ik~~~r~-i 83 (256)
T KOG3120|consen 11 SPRILLVFDFDRTIIDQDSDN-W---VVDELPTTDLFNQLRDTYPKGFW--NELMDRVFKELHEQGVRIAEIKQVLRS-I 83 (256)
T ss_pred CCcEEEEEecCceeecCCcch-H---HHHhcccchhHHHHHHhcccchH--HHHHHHHHHHHHHcCCCHHHHHHHHhc-C
Confidence 357899999999999887632 1 11122221111111222331110 2222332222223388888887 5553 3
Q ss_pred hhhHHHhcCHHHHHHHH---hCC--cEEEEeCCcHHHHHHHHHhhCCCc----EEEeceEEEe-CeEEeeee--------
Q 042170 140 PKFFLENVGLEIFEVLK---KGG--KTVAVSNMPQVMIDSFLRDYLDID----LVVGRELKVF-CGYFVGLM-------- 201 (543)
Q Consensus 140 pk~~~e~l~~ea~~~~~---~~g--~~v~VSAsp~~~vepfak~~lG~d----~VlgTelev~-~G~~TG~~-------- 201 (543)
| +.|.+.++++ +.| .+++||-|-.+.+|.|++. .|+. .|....-.+. +|+++=+=
T Consensus 84 P------~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea-~~~~d~F~~IfTNPa~~da~G~L~v~pyH~~hsC~ 156 (256)
T KOG3120|consen 84 P------IVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEA-AGIHDLFSEIFTNPACVDASGRLLVRPYHTQHSCN 156 (256)
T ss_pred C------CCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHH-ccHHHHHHHHhcCCcccCCCCcEEeecCCCCCccC
Confidence 3 4566666666 455 7889999999999999985 6764 3333333442 46653221
Q ss_pred -ccCCCcHHHH-HHHHH-HhcCC----ceEEEeCCCCCcch-hcccccccCceeec
Q 042170 202 -EDKKKNILVL-QEIIK-QENSG----DVIGISSLNSSLDH-YKLFLQQCNEVYLV 249 (543)
Q Consensus 202 -~g~~~g~~Kv-~~l~~-~~~~~----~~~aygD~~S~~D~-~~m~L~~~~~~y~v 249 (543)
+.+|....+| .++.. ...+. ..+-.|| +.+|. | + +.+..+=|+.
T Consensus 157 ~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGD--G~nD~CP-~-l~Lr~~D~am 208 (256)
T KOG3120|consen 157 LCPSNMCKGLVLDELVASQLKDGVRYERLIYVGD--GANDFCP-V-LRLRACDVAM 208 (256)
T ss_pred cCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcC--CCCCcCc-c-hhcccCceec
Confidence 2223111121 22222 22222 3356699 99998 6 6 5655444443
No 122
>PRK06553 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=92.85 E-value=1.6 Score=45.53 Aligned_cols=134 Identities=14% Similarity=0.086 Sum_probs=78.7
Q ss_pred EEEEeccCCCCccccCcccccCCCceEEEecCCCCCcHHHHHHhh-cCceeEEeeeh--hhhhhhhh----cCceeEeec
Q 042170 324 RFTVITKPKTSRSFQNSRDCQKTERTLYVCNHRTLLDPLYLSFAL-KKNLTAVTYSL--SRMSEILA----PIKTVRMTR 396 (543)
Q Consensus 324 rv~v~G~~~~~~~~~~~~~~~~~~~~l~VaNH~S~LD~~vl~a~l-~~~~~~va~sl--~~v~~~l~----~i~tv~v~R 396 (543)
++++.|.+..... ....+|+|+++-|...+|........ +.|+..+.+.. ..+.+++. ..|.-.+..
T Consensus 116 ~~~~~g~e~l~~a------~a~gkgvIllt~H~GnWE~~~~~l~~~~~~~~~vyr~~~n~~~d~~i~~~R~~~g~~~i~~ 189 (308)
T PRK06553 116 RVEVRGIEIFERL------RDDGKPALIFTAHLGNWELLAIAAAAFGLDVTVLFRPPNNPYAARKVLEARRTTMGGLVPS 189 (308)
T ss_pred eeEecCHHHHHHH------HhcCCCEEEEeeCchHHHHHHHHHHHcCCceEEEEecCCChHHHHHHHHHHHHcCCCcccC
Confidence 4666776654310 01257999999999999998755443 34677666432 22333332 223222321
Q ss_pred CchHHHHHHHHHHhCCC-eEEecCccccCCCccccc--c-----hhhhhcC----CceEEEEEEeccccccccccCCccc
Q 042170 397 NRDQDAKLVKSLLNQGD-LVICPEGTTCREPYLLRF--S-----PLFAEMS----DNIIPVASNSHVTMFYGTTAGGLKC 464 (543)
Q Consensus 397 ~r~~~~~~~~~~L~~G~-l~iFPEGTtt~g~~Ll~F--~-----~~fa~l~----~pV~PVaI~~~~~~~~gt~~~~~~~ 464 (543)
+.+...++.+.|++|. +++-|--...+ +.-.+| + ++.+.++ .||+|+.+....
T Consensus 190 -~~~~~r~l~r~Lk~g~~v~il~DQ~~~~-gv~v~FFG~~a~t~~~~a~LA~~~~apVvp~~~~R~~------------- 254 (308)
T PRK06553 190 -GAGAAFALAGVLERGGHVGMLVDQKFTR-GVEVTFFGRPVKTNPLLAKLARQYDCPVHGARCIRLP------------- 254 (308)
T ss_pred -CChHHHHHHHHHHcCCeEEEEecccCCC-CceeccCCCcCCCCchHHHHHHHHCCCEEEEEEEEcC-------------
Confidence 2346788889999997 66775544322 233355 2 2333333 499998886531
Q ss_pred ccchhcccCCCCeEEEEEcccccC
Q 042170 465 LDPFFFLMNPSPGYTMQLLEGVSG 488 (543)
Q Consensus 465 ~d~~~~l~~P~~~v~V~fL~pi~~ 488 (543)
...|+|+|.+|++.
T Consensus 255 ----------~g~y~i~~~~~~~~ 268 (308)
T PRK06553 255 ----------GGRFRLELTERVEL 268 (308)
T ss_pred ----------CCeEEEEEecCCCC
Confidence 11488999999875
No 123
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=92.37 E-value=0.51 Score=47.61 Aligned_cols=69 Identities=19% Similarity=0.121 Sum_probs=42.1
Q ss_pred HHHHHhCC-cEEEEeC----CcHHHHHHHHHhhCCC--cEEEeceEEEeCeEEeeeeccCCCcHHHHHHHHHHhcCCceE
Q 042170 152 FEVLKKGG-KTVAVSN----MPQVMIDSFLRDYLDI--DLVVGRELKVFCGYFVGLMEDKKKNILVLQEIIKQENSGDVI 224 (543)
Q Consensus 152 ~~~~~~~g-~~v~VSA----sp~~~vepfak~~lG~--d~VlgTelev~~G~~TG~~~g~~~g~~Kv~~l~~~~~~~~~~ 224 (543)
++.+++.| ++++||+ ..+..++.+++. +|+ +.-. +-.++|.-..+ +.|...+++ .+ ..+
T Consensus 123 L~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~-~gip~~~~f-------~vil~gd~~~K---~~K~~~l~~-~~--i~I 188 (237)
T PRK11009 123 IDMHVKRGDSIYFITGRTATKTETVSKTLADD-FHIPADNMN-------PVIFAGDKPGQ---YTKTQWLKK-KN--IRI 188 (237)
T ss_pred HHHHHHCCCeEEEEeCCCCcccHHHHHHHHHH-cCCCcccce-------eEEEcCCCCCC---CCHHHHHHh-cC--CeE
Confidence 34444666 8889998 568899987774 788 5321 11233332111 236555543 22 478
Q ss_pred EEeCCCCCcchh
Q 042170 225 GISSLNSSLDHY 236 (543)
Q Consensus 225 aygD~~S~~D~~ 236 (543)
-||| +.+|..
T Consensus 189 ~IGD--s~~Di~ 198 (237)
T PRK11009 189 FYGD--SDNDIT 198 (237)
T ss_pred EEcC--CHHHHH
Confidence 8999 999976
No 124
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=92.08 E-value=0.33 Score=47.33 Aligned_cols=16 Identities=13% Similarity=0.434 Sum_probs=13.2
Q ss_pred eEEEEEcCCccccCCC
Q 042170 64 RTLIFNVEGFLLKSSS 79 (543)
Q Consensus 64 ~~a~FD~DGTLl~~~s 79 (543)
++++||+||||+..+.
T Consensus 2 k~v~~DlDGTLl~~~~ 17 (215)
T TIGR01487 2 KLVAIDIDGTLTEPNR 17 (215)
T ss_pred cEEEEecCCCcCCCCc
Confidence 5789999999997643
No 125
>PRK08905 lipid A biosynthesis lauroyl acyltransferase; Validated
Probab=91.87 E-value=2.7 Score=43.38 Aligned_cols=139 Identities=17% Similarity=0.198 Sum_probs=79.5
Q ss_pred CCceEEEecCCCCCcHHHHHHhhcCceeEEeeeh--hhhhhhhhc----CceeEeecCchHHHHHHHHHHhCCC-eEEec
Q 042170 346 TERTLYVCNHRTLLDPLYLSFALKKNLTAVTYSL--SRMSEILAP----IKTVRMTRNRDQDAKLVKSLLNQGD-LVICP 418 (543)
Q Consensus 346 ~~~~l~VaNH~S~LD~~vl~a~l~~~~~~va~sl--~~v~~~l~~----i~tv~v~R~r~~~~~~~~~~L~~G~-l~iFP 418 (543)
++|+|+++-|...+|..........|+..+.+.. ..+.+++.. .|.-.+. .+.+...++.+.|++|. +++-+
T Consensus 100 gkgvIllt~H~GnwE~~~~~~~~~~~~~~v~r~~~n~~~~~~~~~~R~~~g~~~i~-~~~~~~~~i~~aLk~g~~v~il~ 178 (289)
T PRK08905 100 GRGILFLTPHLGCFEVTARYIAQRFPLTAMFRPPRKAALRPLMEAGRARGNMRTAP-ATPQGVRMLVKALRRGEAVGILP 178 (289)
T ss_pred CCCEEEEecccchHHHHHHHHHhcCCceEEEECCCCHHHHHHHHHHhcccCCceec-cCCccHHHHHHHHhcCCeEEEcC
Confidence 5799999999999999854433335676666432 233333322 2211221 12345788899999997 66665
Q ss_pred CccccCCC-ccccc--c-----hhhhhcC----CceEEEEEEeccccccccccCCcccccchhcccCCCCeEEEEEcccc
Q 042170 419 EGTTCREP-YLLRF--S-----PLFAEMS----DNIIPVASNSHVTMFYGTTAGGLKCLDPFFFLMNPSPGYTMQLLEGV 486 (543)
Q Consensus 419 EGTtt~g~-~Ll~F--~-----~~fa~l~----~pV~PVaI~~~~~~~~gt~~~~~~~~d~~~~l~~P~~~v~V~fL~pi 486 (543)
--..+.+. ...+| + .+.+.++ .||+|+.+..... ...|+++|.+++
T Consensus 179 Dq~~~~~~g~~v~FfG~~a~~~~gpa~lA~~~~apvvp~~~~R~~~----------------------~~~y~~~~~~~~ 236 (289)
T PRK08905 179 DQVPSGGEGVWAPFFGRPAYTMTLVARLAEVTGVPVIFVAGERLPR----------------------GRGYRLHLRPVQ 236 (289)
T ss_pred CCCCCCCCceEecCCCCcchHHHHHHHHHHhhCCcEEEEEEEEcCC----------------------CCcEEEEEecCC
Confidence 54433222 33455 2 2444333 4999999864310 114888888887
Q ss_pred cCCcccCCCCCCHHHHHHHHHHHHHHH
Q 042170 487 SGLSMCQDGNESRFDVANYVQSELGKA 513 (543)
Q Consensus 487 ~~~~~~~~~~~~~~elA~~vq~~Ia~~ 513 (543)
.+. .++..+.++..-+.+.+.
T Consensus 237 ~~~------~~~~~~~t~~~~~~lE~~ 257 (289)
T PRK08905 237 EPL------PGDKAADAAVINAEIERL 257 (289)
T ss_pred CCC------CCCHHHHHHHHHHHHHHH
Confidence 641 234555555544444443
No 126
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=90.98 E-value=1.1 Score=42.83 Aligned_cols=83 Identities=16% Similarity=0.164 Sum_probs=59.4
Q ss_pred HHHHHHhCC-cEEEEeCCcHHHHHHHHHhhCCCcEEEeceEEEeCeEEeeeeccCCCcHHHHHHHHHHhcCC--ceEEEe
Q 042170 151 IFEVLKKGG-KTVAVSNMPQVMIDSFLRDYLDIDLVVGRELKVFCGYFVGLMEDKKKNILVLQEIIKQENSG--DVIGIS 227 (543)
Q Consensus 151 a~~~~~~~g-~~v~VSAsp~~~vepfak~~lG~d~VlgTelev~~G~~TG~~~g~~~g~~Kv~~l~~~~~~~--~~~ayg 227 (543)
++.++++.| ++.++|+.++..++..++. +|++.... +. ++. ++-.+.+.+.++-. ..+.+|
T Consensus 42 ~~~~L~~~Gi~laIiT~k~~~~~~~~l~~-lgi~~~f~-------~~-------kpk-p~~~~~~~~~l~~~~~ev~~iG 105 (169)
T TIGR02726 42 GVIVLQLCGIDVAIITSKKSGAVRHRAEE-LKIKRFHE-------GI-------KKK-TEPYAQMLEEMNISDAEVCYVG 105 (169)
T ss_pred HHHHHHHCCCEEEEEECCCcHHHHHHHHH-CCCcEEEe-------cC-------CCC-HHHHHHHHHHcCcCHHHEEEEC
Confidence 455666778 7788999999999999986 89874432 10 111 34455555555533 567899
Q ss_pred CCCCCcchhcccccccCceeeccCCc
Q 042170 228 SLNSSLDHYKLFLQQCNEVYLVRSTD 253 (543)
Q Consensus 228 D~~S~~D~~~m~L~~~~~~y~v~p~~ 253 (543)
| +..|.+ | +..|+..|++..+.
T Consensus 106 D--~~nDi~-~-~~~ag~~~am~nA~ 127 (169)
T TIGR02726 106 D--DLVDLS-M-MKRVGLAVAVGDAV 127 (169)
T ss_pred C--CHHHHH-H-HHHCCCeEECcCch
Confidence 9 999999 9 69999999997543
No 127
>PRK06946 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=90.92 E-value=2.8 Score=43.29 Aligned_cols=133 Identities=11% Similarity=0.210 Sum_probs=79.1
Q ss_pred EEEEeccCCCCccccCcccccCCCceEEEecCCCCCcHHHHHHh--hcCceeEEeeeh--hhhhhhhh----cCceeEee
Q 042170 324 RFTVITKPKTSRSFQNSRDCQKTERTLYVCNHRTLLDPLYLSFA--LKKNLTAVTYSL--SRMSEILA----PIKTVRMT 395 (543)
Q Consensus 324 rv~v~G~~~~~~~~~~~~~~~~~~~~l~VaNH~S~LD~~vl~a~--l~~~~~~va~sl--~~v~~~l~----~i~tv~v~ 395 (543)
++++.|.++... .+++|+|+++=|...+|....... ...++..+.+.. ..+.+++. ..|.-.+.
T Consensus 94 ~~~~~g~~~~~~--------~~gkgvI~~t~H~GnWEl~~~~~~~~~~~~~~~vyr~~~n~~~d~~~~~~R~~~g~~~i~ 165 (293)
T PRK06946 94 LVQVDSAIDLTD--------PDGPPTIFLGLHFVGIEAGSIWLNYSLRRRVGSLYTPMSNPLLDAIAKAARGRFGAEMVS 165 (293)
T ss_pred eEEEECHHHHHh--------cCCCCEEEEecchhHHHHHHHHHHhcccCCceEEeeCCCCHHHHHHHHHHHHhcCCCccC
Confidence 577788765431 125799999999999999875432 245666665432 22333322 23433442
Q ss_pred cCchHHHHHHHHHHhCCC-eEEecCccccCC-Cccccc--ch-----hhhhcC----CceEEEEEEeccccccccccCCc
Q 042170 396 RNRDQDAKLVKSLLNQGD-LVICPEGTTCRE-PYLLRF--SP-----LFAEMS----DNIIPVASNSHVTMFYGTTAGGL 462 (543)
Q Consensus 396 R~r~~~~~~~~~~L~~G~-l~iFPEGTtt~g-~~Ll~F--~~-----~fa~l~----~pV~PVaI~~~~~~~~gt~~~~~ 462 (543)
+++..+.+-+.|++|. +.+-|.=-.+.+ +-..+| ++ +.+.++ .||+|+-+....
T Consensus 166 --~~~~~r~~~~~Lk~g~~v~~l~Dq~~~~~~gv~v~FFG~~a~t~~~~a~LA~~~~a~vvp~~~~r~~----------- 232 (293)
T PRK06946 166 --RADSARQVLRWLRDGKPVMLGADMDFGLRDSTFVPFFGVPACTLTAVSRLARTGGAQVVPFITEVLP----------- 232 (293)
T ss_pred --CCchHHHHHHHHhCCCeEEEeCCCCCCCCCCeEeCCCCCCcHHhHHHHHHHHhcCCeEEEEEEEEeC-----------
Confidence 2345888889999997 667766554322 344466 21 344333 399998665421
Q ss_pred ccccchhcccCCCCeEEEEEcccccC
Q 042170 463 KCLDPFFFLMNPSPGYTMQLLEGVSG 488 (543)
Q Consensus 463 ~~~d~~~~l~~P~~~v~V~fL~pi~~ 488 (543)
....|++++.+|++.
T Consensus 233 -----------~~~~~~~~~~~~~~~ 247 (293)
T PRK06946 233 -----------DYKGYRLRVFKPWEN 247 (293)
T ss_pred -----------CCCeEEEEEeCCCcC
Confidence 011378888888875
No 128
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=90.88 E-value=2 Score=41.54 Aligned_cols=16 Identities=38% Similarity=0.723 Sum_probs=13.6
Q ss_pred eEEEEEcCCccccCCC
Q 042170 64 RTLIFNVEGFLLKSSS 79 (543)
Q Consensus 64 ~~a~FD~DGTLl~~~s 79 (543)
++++||+||||+.++.
T Consensus 3 k~viFDldGtL~d~~~ 18 (211)
T TIGR02247 3 KAVIFDFGGVLLPSPG 18 (211)
T ss_pred eEEEEecCCceecCHH
Confidence 5799999999998743
No 129
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=90.67 E-value=1.3 Score=44.42 Aligned_cols=61 Identities=16% Similarity=0.306 Sum_probs=38.8
Q ss_pred HHHhCC-cEEEEeCCcHHHHHHHHHhhCCCcE-EEeceEEEeCeE--E---eeeeccCCC-cHHHHHHHHHHhcC
Q 042170 154 VLKKGG-KTVAVSNMPQVMIDSFLRDYLDIDL-VVGRELKVFCGY--F---VGLMEDKKK-NILVLQEIIKQENS 220 (543)
Q Consensus 154 ~~~~~g-~~v~VSAsp~~~vepfak~~lG~d~-VlgTelev~~G~--~---TG~~~g~~~-g~~Kv~~l~~~~~~ 220 (543)
.+++.| +++++|+=+-..+++++++ +|++. +| ..||- | +|++....+ ..+-+.++.+.+.+
T Consensus 31 ~~~~~G~~~~iaTGR~~~~~~~~~~~-l~~~~~~I-----~~NGa~i~d~~~~~~l~~~~l~~~~~~~i~~~~~~ 99 (272)
T PRK10530 31 RAREAGYKVIIVTGRHHVAIHPFYQA-LALDTPAI-----CCNGTYLYDYQAKKVLEADPLPVQQALQVIEMLDE 99 (272)
T ss_pred HHHHCCCEEEEEcCCChHHHHHHHHh-cCCCCCEE-----EcCCcEEEecCCCEEEEecCCCHHHHHHHHHHHHh
Confidence 344556 8888898888888899887 88872 22 22442 2 355444444 46777777776654
No 130
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=90.45 E-value=1.3 Score=44.45 Aligned_cols=62 Identities=13% Similarity=0.180 Sum_probs=37.8
Q ss_pred HHHHHhCC-cEEEEeCCcHHHHHHHHHhhCCCcE----EEeceEEEeCeEE-----eeeeccCCC-cHHHHHHHHHHhc
Q 042170 152 FEVLKKGG-KTVAVSNMPQVMIDSFLRDYLDIDL----VVGRELKVFCGYF-----VGLMEDKKK-NILVLQEIIKQEN 219 (543)
Q Consensus 152 ~~~~~~~g-~~v~VSAsp~~~vepfak~~lG~d~----VlgTelev~~G~~-----TG~~~g~~~-g~~Kv~~l~~~~~ 219 (543)
++.+++.| +++++|+=|-..+.+++++ +|++. +|+ .||-+ +|++..... ..+-+.++.+...
T Consensus 29 i~~l~~~G~~~~iaTGR~~~~~~~~~~~-l~~~~~~~~~I~-----~NGa~i~~~~~~~~i~~~~l~~~~~~~i~~~~~ 101 (270)
T PRK10513 29 IAAARAKGVNVVLTTGRPYAGVHRYLKE-LHMEQPGDYCIT-----NNGALVQKAADGETVAQTALSYDDYLYLEKLSR 101 (270)
T ss_pred HHHHHHCCCEEEEecCCChHHHHHHHHH-hCCCCCCCeEEE-----cCCeEEEECCCCCEEEecCCCHHHHHHHHHHHH
Confidence 34455667 8888998888888999887 78752 332 24432 354433333 3566666666554
No 131
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=90.04 E-value=0.76 Score=46.64 Aligned_cols=28 Identities=11% Similarity=0.204 Sum_probs=22.8
Q ss_pred HHhCC-cEEEEeCCcHHHHHHHHHhhCCCc
Q 042170 155 LKKGG-KTVAVSNMPQVMIDSFLRDYLDID 183 (543)
Q Consensus 155 ~~~~g-~~v~VSAsp~~~vepfak~~lG~d 183 (543)
+++.| ++|+.|+=+-..+++++++ +|+|
T Consensus 36 l~~~Gi~~viaTGR~~~~i~~~~~~-l~~~ 64 (271)
T PRK03669 36 LREAQVPVILCSSKTAAEMLPLQQT-LGLQ 64 (271)
T ss_pred HHHcCCeEEEEcCCCHHHHHHHHHH-hCCC
Confidence 44556 8888998888899999987 8986
No 132
>PRK10976 putative hydrolase; Provisional
Probab=89.70 E-value=0.88 Score=45.71 Aligned_cols=62 Identities=13% Similarity=0.155 Sum_probs=37.9
Q ss_pred HHHHhCC-cEEEEeCCcHHHHHHHHHhhCCCcE-EEeceEEEeCeE--E--eeeeccCCC-cHHHHHHHHHHhcC
Q 042170 153 EVLKKGG-KTVAVSNMPQVMIDSFLRDYLDIDL-VVGRELKVFCGY--F--VGLMEDKKK-NILVLQEIIKQENS 220 (543)
Q Consensus 153 ~~~~~~g-~~v~VSAsp~~~vepfak~~lG~d~-VlgTelev~~G~--~--TG~~~g~~~-g~~Kv~~l~~~~~~ 220 (543)
+.+++.| +++++|+=+...+++++++ +|+|. +|| .||- | +|....... -.+.+.++.+.+.+
T Consensus 29 ~~l~~~G~~~~iaTGR~~~~~~~~~~~-l~~~~~~I~-----~NGa~i~~~~~~~i~~~~l~~~~~~~i~~~~~~ 97 (266)
T PRK10976 29 KLLTARGIHFVFATGRHHVDVGQIRDN-LEIKSYMIT-----SNGARVHDTDGNLIFSHNLDRDIASDLFGVVHD 97 (266)
T ss_pred HHHHHCCCEEEEEcCCChHHHHHHHHh-cCCCCeEEE-----cCCcEEECCCCCEehhhcCCHHHHHHHHHhhcc
Confidence 3345556 8888997777788888886 89873 332 2443 2 344333333 46777777776543
No 133
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=89.54 E-value=0.82 Score=46.18 Aligned_cols=60 Identities=13% Similarity=0.139 Sum_probs=36.5
Q ss_pred HHHhCC-cEEEEeCCcHHHHHHHHHhhCCCcE-EEeceEEEeCeEE----eeeeccCCC-cHHHHHHHHHHhc
Q 042170 154 VLKKGG-KTVAVSNMPQVMIDSFLRDYLDIDL-VVGRELKVFCGYF----VGLMEDKKK-NILVLQEIIKQEN 219 (543)
Q Consensus 154 ~~~~~g-~~v~VSAsp~~~vepfak~~lG~d~-VlgTelev~~G~~----TG~~~g~~~-g~~Kv~~l~~~~~ 219 (543)
.+++.| +++++|+=+-..+++++++ +|++. +|| .||-+ +|....... ..+.+.++.+...
T Consensus 30 ~l~~~G~~~~iaTGR~~~~~~~~~~~-l~~~~~~I~-----~NGa~I~~~~~~~l~~~~i~~~~~~~i~~~~~ 96 (272)
T PRK15126 30 RLRERDITLTFATGRHVLEMQHILGA-LSLDAYLIT-----GNGTRVHSLEGELLHRQDLPADVAELVLHQQW 96 (272)
T ss_pred HHHHCCCEEEEECCCCHHHHHHHHHH-cCCCCcEEe-----cCCcEEEcCCCCEEEeecCCHHHHHHHHHHhh
Confidence 344567 7888998888888999887 88872 232 23332 233222223 4677777766554
No 134
>PRK15174 Vi polysaccharide export protein VexE; Provisional
Probab=89.06 E-value=5 Score=46.27 Aligned_cols=138 Identities=10% Similarity=0.067 Sum_probs=79.4
Q ss_pred CCceEEEecCCCCCcHHHHHHhh-cCceeEEeeehhhhhhhhhcCceeEeec---CchHHHHHHHHHHhCCC-eEEecCc
Q 042170 346 TERTLYVCNHRTLLDPLYLSFAL-KKNLTAVTYSLSRMSEILAPIKTVRMTR---NRDQDAKLVKSLLNQGD-LVICPEG 420 (543)
Q Consensus 346 ~~~~l~VaNH~S~LD~~vl~a~l-~~~~~~va~sl~~v~~~l~~i~tv~v~R---~r~~~~~~~~~~L~~G~-l~iFPEG 420 (543)
.+|+|+++-|...++........ ..|+..+...+..+ ....|.-.|.. +.......|.+.|++|. |++-|--
T Consensus 478 ~kgvi~~t~H~gnwE~~~~~~~~~~~~~~~i~r~~~~~---R~~~g~~~i~~~~~~~~~~~r~i~~aLk~g~~v~il~Dq 554 (656)
T PRK15174 478 QRGCIIVSAHLGAMYAGPMILSLLEMNSKWVASTPGVL---KGGYGERLISVSDKSEADVVRACMQTLHSGQSLVVAIDG 554 (656)
T ss_pred CCCEEEEecCcchhhHHHHHHHHcCCCceeeecchHHH---HHhcCCceeccCCCCcchHHHHHHHHHHcCCeEEEEeCC
Confidence 57999999999999997655443 23566555433322 22333223432 22345788999999997 6677555
Q ss_pred cccCCCccccc-------chhhhhcC----CceEEEEEEeccccccccccCCcccccchhcccCCCCeEEEEEcccccCC
Q 042170 421 TTCREPYLLRF-------SPLFAEMS----DNIIPVASNSHVTMFYGTTAGGLKCLDPFFFLMNPSPGYTMQLLEGVSGL 489 (543)
Q Consensus 421 Ttt~g~~Ll~F-------~~~fa~l~----~pV~PVaI~~~~~~~~gt~~~~~~~~d~~~~l~~P~~~v~V~fL~pi~~~ 489 (543)
....+..-.+| ..+.+.++ .||+|+.+.... ....|++++.+|+..
T Consensus 555 ~~~~~~~~v~FfG~~a~~~~g~~~lA~~~~~pvv~~~~~~~~----------------------~~~~y~l~~~~~~~~- 611 (656)
T PRK15174 555 ALNLSAPTIDFFGQQITYSTFCSRLAWKMHLPTVFSVPIWKN----------------------RHIHFVLERMVDPLK- 611 (656)
T ss_pred CCCCCCceeccCCCccCcCcHHHHHHHHHCCCEEEeEEEEec----------------------CceeEEEEecCCCcc-
Confidence 54333233355 22444433 499998884321 011488888877433
Q ss_pred cccCCCCCCHHHHHHHHHHHHHHHhC
Q 042170 490 SMCQDGNESRFDVANYVQSELGKALG 515 (543)
Q Consensus 490 ~~~~~~~~~~~elA~~vq~~Ia~~Lg 515 (543)
.+++.+..+...+.+.+.|.
T Consensus 612 ------~~~~~~~~~~~~~~y~~~l~ 631 (656)
T PRK15174 612 ------FESQLSFTERWKENYLQCVT 631 (656)
T ss_pred ------chhHHHHHHHHHHHHHHHHH
Confidence 23455555555555555543
No 135
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=88.93 E-value=0.66 Score=52.14 Aligned_cols=82 Identities=16% Similarity=0.081 Sum_probs=61.7
Q ss_pred cCHHHHHHHH---hCC--cEEEEeCCcHHHHHHHHHhhCCCcEEEeceEEEeCeEEeeeeccCCC-cHHHHHHHHHHhcC
Q 042170 147 VGLEIFEVLK---KGG--KTVAVSNMPQVMIDSFLRDYLDIDLVVGRELKVFCGYFVGLMEDKKK-NILVLQEIIKQENS 220 (543)
Q Consensus 147 l~~ea~~~~~---~~g--~~v~VSAsp~~~vepfak~~lG~d~VlgTelev~~G~~TG~~~g~~~-g~~Kv~~l~~~~~~ 220 (543)
++|++.+.++ +.| +++++|+.++..++.++++ +|+|.+.+ ++ .++|.+.++++..+
T Consensus 363 l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~-lgi~~~f~-----------------~~~p~~K~~~i~~l~~~ 424 (536)
T TIGR01512 363 PRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARE-LGIDEVHA-----------------ELLPEDKLEIVKELREK 424 (536)
T ss_pred chHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHH-cCChhhhh-----------------ccCcHHHHHHHHHHHhc
Confidence 6677776555 566 5778999999999999997 99975321 11 35788888777544
Q ss_pred C-ceEEEeCCCCCcchhcccccccCceeecc
Q 042170 221 G-DVIGISSLNSSLDHYKLFLQQCNEVYLVR 250 (543)
Q Consensus 221 ~-~~~aygD~~S~~D~~~m~L~~~~~~y~v~ 250 (543)
. ..+.+|| +..|.+ + ++.|+-...+.
T Consensus 425 ~~~v~~vGD--g~nD~~-a-l~~A~vgia~g 451 (536)
T TIGR01512 425 YGPVAMVGD--GINDAP-A-LAAADVGIAMG 451 (536)
T ss_pred CCEEEEEeC--CHHHHH-H-HHhCCEEEEeC
Confidence 3 4568899 999999 9 79999877775
No 136
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=88.93 E-value=1.8 Score=41.15 Aligned_cols=79 Identities=18% Similarity=0.141 Sum_probs=55.3
Q ss_pred cCHHHHHHHH---hCC-cEEEEeCCcHHHHHHHHHhhCCCcE--EEeceEEEeCeEEeeeeccCCCcHHH--HHHHHHHh
Q 042170 147 VGLEIFEVLK---KGG-KTVAVSNMPQVMIDSFLRDYLDIDL--VVGRELKVFCGYFVGLMEDKKKNILV--LQEIIKQE 218 (543)
Q Consensus 147 l~~ea~~~~~---~~g-~~v~VSAsp~~~vepfak~~lG~d~--VlgTelev~~G~~TG~~~g~~~g~~K--v~~l~~~~ 218 (543)
+++++.+.++ +.| +++++|.-.+..++.++++ +|++. |.+... ++ -+.| .+.++++-
T Consensus 128 ~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~-lgi~~~~v~a~~~------------~k--P~~k~~~~~i~~l~ 192 (215)
T PF00702_consen 128 LRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQ-LGIFDSIVFARVI------------GK--PEPKIFLRIIKELQ 192 (215)
T ss_dssp BHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHH-TTSCSEEEEESHE------------TT--THHHHHHHHHHHHT
T ss_pred chhhhhhhhhhhhccCcceeeeeccccccccccccc-ccccccccccccc------------cc--ccchhHHHHHHHHh
Confidence 6666666555 688 8899999999999999986 99942 222221 21 2467 67777653
Q ss_pred cCC-ceEEEeCCCCCcchhcccccccC
Q 042170 219 NSG-DVIGISSLNSSLDHYKLFLQQCN 244 (543)
Q Consensus 219 ~~~-~~~aygD~~S~~D~~~m~L~~~~ 244 (543)
.+. ..+..|| +..|.+ | ++.|+
T Consensus 193 ~~~~~v~~vGD--g~nD~~-a-l~~Ag 215 (215)
T PF00702_consen 193 VKPGEVAMVGD--GVNDAP-A-LKAAG 215 (215)
T ss_dssp CTGGGEEEEES--SGGHHH-H-HHHSS
T ss_pred cCCCEEEEEcc--CHHHHH-H-HHhCc
Confidence 232 6778999 999999 9 77664
No 137
>PLN02423 phosphomannomutase
Probab=88.87 E-value=0.22 Score=50.22 Aligned_cols=33 Identities=18% Similarity=0.193 Sum_probs=21.2
Q ss_pred HHHHHhhCCCcEEEeceEEEeCeEEeeeeccCCC
Q 042170 173 DSFLRDYLDIDLVVGRELKVFCGYFVGLMEDKKK 206 (543)
Q Consensus 173 epfak~~lG~d~VlgTelev~~G~~TG~~~g~~~ 206 (543)
+++... +++-...++.++..++..++...+.+|
T Consensus 105 ~~~~~~-~~i~~~~~~~ie~~~~i~~~~~~~~~~ 137 (245)
T PLN02423 105 LHYIAD-LDIPIKRGTFIEFRSGMLNVSPIGRNC 137 (245)
T ss_pred HHHHHH-cCCccccCCeEEccCCccccCcccccC
Confidence 444332 555556677777667777777777777
No 138
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=88.70 E-value=0.87 Score=51.35 Aligned_cols=83 Identities=17% Similarity=0.131 Sum_probs=61.5
Q ss_pred cCHHHHHHHH---hCC--cEEEEeCCcHHHHHHHHHhhCCCcEEEeceEEEeCeEEeeeeccCCCcHHHHHHHHHHhcCC
Q 042170 147 VGLEIFEVLK---KGG--KTVAVSNMPQVMIDSFLRDYLDIDLVVGRELKVFCGYFVGLMEDKKKNILVLQEIIKQENSG 221 (543)
Q Consensus 147 l~~ea~~~~~---~~g--~~v~VSAsp~~~vepfak~~lG~d~VlgTelev~~G~~TG~~~g~~~g~~Kv~~l~~~~~~~ 221 (543)
++|++.+.++ +.| +++++|+.++..++..+++ +|+|++.+. + ..+.|.+.++++....
T Consensus 385 ~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~-lgi~~~f~~------------~----~p~~K~~~v~~l~~~~ 447 (556)
T TIGR01525 385 LRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAE-LGIDEVHAE------------L----LPEDKLAIVKELQEEG 447 (556)
T ss_pred chHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHH-hCCCeeecc------------C----CHHHHHHHHHHHHHcC
Confidence 7777777655 556 7778999999999999986 999754321 0 1357888777765433
Q ss_pred -ceEEEeCCCCCcchhcccccccCceeecc
Q 042170 222 -DVIGISSLNSSLDHYKLFLQQCNEVYLVR 250 (543)
Q Consensus 222 -~~~aygD~~S~~D~~~m~L~~~~~~y~v~ 250 (543)
..+..|| +..|.+ + ++.++-...+.
T Consensus 448 ~~v~~vGD--g~nD~~-a-l~~A~vgia~g 473 (556)
T TIGR01525 448 GVVAMVGD--GINDAP-A-LAAADVGIAMG 473 (556)
T ss_pred CEEEEEEC--ChhHHH-H-HhhCCEeEEeC
Confidence 4568899 999999 9 79999666554
No 139
>PRK06860 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=88.48 E-value=6.8 Score=40.74 Aligned_cols=155 Identities=14% Similarity=0.112 Sum_probs=89.8
Q ss_pred EEEEeccCCCCccccCcccccCCCceEEEecCCCCCcHHHHHHhhcCceeEEeeeh--hhhhhhhh----cCceeEeecC
Q 042170 324 RFTVITKPKTSRSFQNSRDCQKTERTLYVCNHRTLLDPLYLSFALKKNLTAVTYSL--SRMSEILA----PIKTVRMTRN 397 (543)
Q Consensus 324 rv~v~G~~~~~~~~~~~~~~~~~~~~l~VaNH~S~LD~~vl~a~l~~~~~~va~sl--~~v~~~l~----~i~tv~v~R~ 397 (543)
++++.|.+..... ...++|+|+++-|...++..........++..+.+.. ..+..++. ..|.-.+.+
T Consensus 109 ~v~i~g~e~l~~a------~~~gkgvI~lt~H~GnwE~~~~~~~~~~~~~~vyr~~~n~~~d~~~~~~R~~~g~~~i~~- 181 (309)
T PRK06860 109 WTEVEGLEHIREV------QAQGRGVLLVGVHFLTLELGARIFGMHNPGIGVYRPNDNPLYDWLQTWGRLRSNKSMLDR- 181 (309)
T ss_pred eEEEeCHHHHHHH------HhCCCCEEEEecchhHHHHHHHHHHccCCCeEEeeCCCCHHHHHHHHHHHhhcCCcCcCc-
Confidence 5788887764310 1125799999999999999765444334665665422 22222222 223333322
Q ss_pred chHHHHHHHHHHhCCC-eEEecCccccCC-Cccccc--------chhhhhcC----CceEEEEEEeccccccccccCCcc
Q 042170 398 RDQDAKLVKSLLNQGD-LVICPEGTTCRE-PYLLRF--------SPLFAEMS----DNIIPVASNSHVTMFYGTTAGGLK 463 (543)
Q Consensus 398 r~~~~~~~~~~L~~G~-l~iFPEGTtt~g-~~Ll~F--------~~~fa~l~----~pV~PVaI~~~~~~~~gt~~~~~~ 463 (543)
++.+++-+.|++|. +++-|--....+ +...+| ..+.+.++ .||+|+.+....
T Consensus 182 --~~~r~~~k~Lk~g~~v~il~Dq~~~~~~gv~v~FfG~~~a~t~~g~a~LA~~~~apvvp~~~~R~~------------ 247 (309)
T PRK06860 182 --KDLKGMIKALKKGERIWYAPDHDYGPRSSVFVPFFAVEQAATTTGTWMLARMSKAAVIPFVPRRKP------------ 247 (309)
T ss_pred --ccHHHHHHHHhcCCeEEEeCCCCCCCCCCEEecCCCCCchhhHHHHHHHHHHhCCeEEEEEEEEeC------------
Confidence 24788888999997 666655444322 233455 22333333 499999886532
Q ss_pred cccchhcccCCCCeEEEEEcccccCCcccCCCCCCHHHHHHHHHHHHHHHh
Q 042170 464 CLDPFFFLMNPSPGYTMQLLEGVSGLSMCQDGNESRFDVANYVQSELGKAL 514 (543)
Q Consensus 464 ~~d~~~~l~~P~~~v~V~fL~pi~~~~~~~~~~~~~~elA~~vq~~Ia~~L 514 (543)
....|+|+|.+|++.. ..++..+.++.+.+.+.+..
T Consensus 248 ----------~~~~~~i~~~~~~~~~-----~~~d~~~~t~~~n~~lE~~I 283 (309)
T PRK06860 248 ----------DGKGYELIILPPEDSP-----PLDDAEATAAWMNKVVEKCI 283 (309)
T ss_pred ----------CCCeEEEEEecCCCCC-----CCCCHHHHHHHHHHHHHHHH
Confidence 1114889998888752 23566666666666655544
No 140
>PRK05906 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=88.10 E-value=7 Score=43.22 Aligned_cols=102 Identities=17% Similarity=0.217 Sum_probs=63.1
Q ss_pred CCceEEEecCCCCCcHHHHHHhhcCceeEEeeeh--hhhhhhh----hcCceeEeecCchHHHHHHHHHHhCCC-eEEec
Q 042170 346 TERTLYVCNHRTLLDPLYLSFALKKNLTAVTYSL--SRMSEIL----APIKTVRMTRNRDQDAKLVKSLLNQGD-LVICP 418 (543)
Q Consensus 346 ~~~~l~VaNH~S~LD~~vl~a~l~~~~~~va~sl--~~v~~~l----~~i~tv~v~R~r~~~~~~~~~~L~~G~-l~iFP 418 (543)
++|+|+++-|...+|..........|+..+.+.. ..+.+++ ...|.-.+.. ++..+++-+.|++|. +++-|
T Consensus 139 gkGvIllt~H~GNWEl~~~~l~~~~p~~~vyRp~kNp~ld~li~~~R~r~G~~lI~~--~~giR~liraLk~G~~vgiL~ 216 (454)
T PRK05906 139 QEGAILFCGHQANWELPFLYITKRYPGLAFAKPIKNRRLNKKIFSLRESFKGKIVPP--KNGINQALRALHQGEVVGIVG 216 (454)
T ss_pred CCCEEEEeehhhHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHhcCCeeecC--chHHHHHHHHHhcCCEEEEEe
Confidence 5799999999999999665333345666665432 2233333 2233333432 356888889999997 67776
Q ss_pred CccccCCCccccc--ch-----hhhhcC----CceEEEEEEe
Q 042170 419 EGTTCREPYLLRF--SP-----LFAEMS----DNIIPVASNS 449 (543)
Q Consensus 419 EGTtt~g~~Ll~F--~~-----~fa~l~----~pV~PVaI~~ 449 (543)
--...+++.-.+| ++ +.+.++ .||+|+.+.-
T Consensus 217 DQ~~~~~Gv~VpFFG~~a~T~tgpA~LA~rtgApVVpv~~~R 258 (454)
T PRK05906 217 DQALLSSSYSYPLFGSQAFTTTSPALLAYKTGKPVIAVAIYR 258 (454)
T ss_pred CCCCCCCceEeCCCCCccchhhHHHHHHHHhCCeEEEEEEEE
Confidence 6554444445566 22 344433 4999988753
No 141
>TIGR02208 lipid_A_msbB lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase. This family consists of MsbB in E. coli and closely related proteins in other species. MsbB is homologous to HtrB (TIGR02207) and acts immediately after it in the biosynthesis of KDO-2 lipid A (also called Re LPS and Re endotoxin). These two enzymes act after creation of KDO-2 lipid IV-A by addition of the KDO sugars.
Probab=88.05 E-value=7.6 Score=40.31 Aligned_cols=154 Identities=11% Similarity=0.157 Sum_probs=87.3
Q ss_pred EEEEeccCCCCccccCcccccCCCceEEEecCCCCCcHHHHHHh-hcCceeEEeeeh--hhhhhhhh----cCceeEeec
Q 042170 324 RFTVITKPKTSRSFQNSRDCQKTERTLYVCNHRTLLDPLYLSFA-LKKNLTAVTYSL--SRMSEILA----PIKTVRMTR 396 (543)
Q Consensus 324 rv~v~G~~~~~~~~~~~~~~~~~~~~l~VaNH~S~LD~~vl~a~-l~~~~~~va~sl--~~v~~~l~----~i~tv~v~R 396 (543)
++++.|.+..... ...++|+|+++=|...+|....... ...|+..|.... ..+..++. ..|.-.+.
T Consensus 105 ~~~i~g~e~l~~~------~~~gkgvi~~t~H~gnwE~~~~~~~~~~~~~~~v~r~~~n~~~d~~~~~~R~~~g~~~i~- 177 (305)
T TIGR02208 105 RVNLMGLEHIEAA------QAAGKPVIFLVPHGWAIDYAGLRLASQGLPMVTMFNNHKNPLFDWLWNRVRSRFGGHVYA- 177 (305)
T ss_pred ceEEeCHHHHHHH------HhCCCCEEEEecchhHHHHHHHHHHhcCCCceEEeeCCCCHHHHHHHHHHHhcCCCceec-
Confidence 5777887654310 0125799999999999997754443 245676666432 22333322 23322333
Q ss_pred CchHHHHHHHHHHhCCC-eEEecCccccCC-Cccccc--c-----hhhhhcC----CceEEEEEEeccccccccccCCcc
Q 042170 397 NRDQDAKLVKSLLNQGD-LVICPEGTTCRE-PYLLRF--S-----PLFAEMS----DNIIPVASNSHVTMFYGTTAGGLK 463 (543)
Q Consensus 397 ~r~~~~~~~~~~L~~G~-l~iFPEGTtt~g-~~Ll~F--~-----~~fa~l~----~pV~PVaI~~~~~~~~gt~~~~~~ 463 (543)
.++..+++.+.|++|. +++-+--....+ +-..+| + ++.+.++ .||+|+.+....
T Consensus 178 -~~~~~r~i~~aLk~g~~v~il~Dq~~~~~~gv~v~FfG~~a~t~~~~a~LA~~~~apvv~~~~~r~~------------ 244 (305)
T TIGR02208 178 -REAGIKALLASLKRGESGYYLPDEDHGPEQSVFVPFFATYKATLPVVGRLAKAGNAQVVPVFPGYNQ------------ 244 (305)
T ss_pred -ChhhHHHHHHHHhCCCeEEEeCCCCCCCCCCeEeccCCCcchhHHHHHHHHHhcCCeEEEEEEEEEC------------
Confidence 3456888999999997 666655544322 234466 2 1333333 499999875421
Q ss_pred cccchhcccCCCCeEEEEEcccccCCcccCCCCCCHHHHHHHHHHHHHH
Q 042170 464 CLDPFFFLMNPSPGYTMQLLEGVSGLSMCQDGNESRFDVANYVQSELGK 512 (543)
Q Consensus 464 ~~d~~~~l~~P~~~v~V~fL~pi~~~~~~~~~~~~~~elA~~vq~~Ia~ 512 (543)
....|+|+|.+|++.. ..++..+.++.+-+.+.+
T Consensus 245 ----------~~~~~~i~~~~~~~~~-----~~~~~~~~t~~~n~~lE~ 278 (305)
T TIGR02208 245 ----------VTGKFELTVRPAMATE-----LSVDPEQEARAMNKEVEQ 278 (305)
T ss_pred ----------CCCeEEEEEecCCCCC-----CCCCHHHHHHHHHHHHHH
Confidence 0114888888887642 124555555554444443
No 142
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=87.91 E-value=0.79 Score=43.41 Aligned_cols=102 Identities=16% Similarity=0.184 Sum_probs=69.2
Q ss_pred HHHHHHhCC-cEEEEeCCcHHHHHHHHHhhCCCcEEEeceEEEeCeEEeeeeccCCCcHHHHHHHHHHhcC---C-ceEE
Q 042170 151 IFEVLKKGG-KTVAVSNMPQVMIDSFLRDYLDIDLVVGRELKVFCGYFVGLMEDKKKNILVLQEIIKQENS---G-DVIG 225 (543)
Q Consensus 151 a~~~~~~~g-~~v~VSAsp~~~vepfak~~lG~d~VlgTelev~~G~~TG~~~g~~~g~~Kv~~l~~~~~~---~-~~~a 225 (543)
+++.+.+.| ++.++|.=-..+||-=+++ ||++++ |.|.- .|..+..++... . ..+|
T Consensus 43 Gik~l~~~Gi~vAIITGr~s~ive~Ra~~-LGI~~~-----------~qG~~-------dK~~a~~~L~~~~~l~~e~~a 103 (170)
T COG1778 43 GIKLLLKSGIKVAIITGRDSPIVEKRAKD-LGIKHL-----------YQGIS-------DKLAAFEELLKKLNLDPEEVA 103 (170)
T ss_pred HHHHHHHcCCeEEEEeCCCCHHHHHHHHH-cCCcee-----------eechH-------hHHHHHHHHHHHhCCCHHHhh
Confidence 456666778 8888997777789988887 999753 55543 477766666543 2 4456
Q ss_pred E-eCCCCCcchhcccccccCceeeccCCcccCCcccccCCCCCCeeeeCCCccccc
Q 042170 226 I-SSLNSSLDHYKLFLQQCNEVYLVRSTDKRSWQHLSRDKYPKPLIFHDGRLAFRP 280 (543)
Q Consensus 226 y-gD~~S~~D~~~m~L~~~~~~y~v~p~~~~~w~~l~~~~~~~plifhdgr~~~~p 280 (543)
| || ...|+| + |+.|+-++++..+. |-..++..|- +.-+.|+.|.|-
T Consensus 104 yiGD--D~~Dlp-v-m~~vGls~a~~dAh---~~v~~~a~~V--t~~~GG~GAvRE 150 (170)
T COG1778 104 YVGD--DLVDLP-V-MEKVGLSVAVADAH---PLLKQRADYV--TSKKGGEGAVRE 150 (170)
T ss_pred hhcC--ccccHH-H-HHHcCCcccccccC---HHHHHhhHhh--hhccCcchHHHH
Confidence 5 99 899999 9 79999999997543 2222233332 244567777775
No 143
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=87.70 E-value=19 Score=35.79 Aligned_cols=87 Identities=15% Similarity=0.098 Sum_probs=49.2
Q ss_pred cCHHHHHHHH---hCC-cEEEEeCCcHHHHHHHHHhhCC---CcEEEeceEEEeCeEEeeeeccCCCcHHHHHHHHHHhc
Q 042170 147 VGLEIFEVLK---KGG-KTVAVSNMPQVMIDSFLRDYLD---IDLVVGRELKVFCGYFVGLMEDKKKNILVLQEIIKQEN 219 (543)
Q Consensus 147 l~~ea~~~~~---~~g-~~v~VSAsp~~~vepfak~~lG---~d~VlgTelev~~G~~TG~~~g~~~g~~Kv~~l~~~~~ 219 (543)
+.|++.+.++ +.| +++++|+.+....+.+++. .+ ++.. .+++|...+..+. .++-..++.+.++
T Consensus 96 lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~-~~~~~L~~~-------f~~~fd~~~g~KP-~p~~y~~i~~~lg 166 (220)
T TIGR01691 96 LYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGH-SDAGNLTPY-------FSGYFDTTVGLKT-EAQSYVKIAGQLG 166 (220)
T ss_pred cCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhh-ccccchhhh-------cceEEEeCcccCC-CHHHHHHHHHHhC
Confidence 5666665554 678 8888999888877776653 32 2111 2334432211111 2445555555555
Q ss_pred CC--ceEEEeCCCCCcchhcccccccCce
Q 042170 220 SG--DVIGISSLNSSLDHYKLFLQQCNEV 246 (543)
Q Consensus 220 ~~--~~~aygD~~S~~D~~~m~L~~~~~~ 246 (543)
-. ..+.+|| +..|.. - -..+|-.
T Consensus 167 v~p~e~lfVgD--s~~Di~-A-A~~AG~~ 191 (220)
T TIGR01691 167 SPPREILFLSD--IINELD-A-ARKAGLH 191 (220)
T ss_pred cChhHEEEEeC--CHHHHH-H-HHHcCCE
Confidence 33 5789999 888876 4 3445544
No 144
>PRK05646 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=87.61 E-value=10 Score=39.40 Aligned_cols=134 Identities=10% Similarity=0.145 Sum_probs=76.4
Q ss_pred EEEEeccCCCCccccCcccccCCCceEEEecCCCCCcHHHHHHhhcCceeEEeeehh--hhhhhhh----cCc--eeEee
Q 042170 324 RFTVITKPKTSRSFQNSRDCQKTERTLYVCNHRTLLDPLYLSFALKKNLTAVTYSLS--RMSEILA----PIK--TVRMT 395 (543)
Q Consensus 324 rv~v~G~~~~~~~~~~~~~~~~~~~~l~VaNH~S~LD~~vl~a~l~~~~~~va~sl~--~v~~~l~----~i~--tv~v~ 395 (543)
++++.|.+..... ...++|+|+++-|...+|..........++..+.+... .+..++. ..| .+.+
T Consensus 106 ~~~~~g~e~l~~a------~~~gkgvI~~t~H~GnWE~~~~~~~~~~~~~~vyr~~~n~~~d~~~~~~R~~~g~~~i~~- 178 (310)
T PRK05646 106 LAHIEGLEHLQQA------QQEGQGVILMALHFTTLEIGAALLGQQHTIDGMYREHKNPVFDFIQRRGRERHNLDSTAI- 178 (310)
T ss_pred eEEEeCHHHHHHH------HhCCCCEEEEecchhHHHHHHHHHHccCCCeEEeeCCCCHHHHHHHHHHhhccCCCcccc-
Confidence 5777887764310 11257999999999999997644333344444443221 1222222 122 2222
Q ss_pred cCchHHHHHHHHHHhCCC-eEEecCccccCCC-ccccc--c-----hhhhhcC----CceEEEEEEeccccccccccCCc
Q 042170 396 RNRDQDAKLVKSLLNQGD-LVICPEGTTCREP-YLLRF--S-----PLFAEMS----DNIIPVASNSHVTMFYGTTAGGL 462 (543)
Q Consensus 396 R~r~~~~~~~~~~L~~G~-l~iFPEGTtt~g~-~Ll~F--~-----~~fa~l~----~pV~PVaI~~~~~~~~gt~~~~~ 462 (543)
.++..+.+-+.|++|. +++-+--....+. ...+| + .+.+.++ .||+|+.+.....
T Consensus 179 --~~~~~r~ilk~Lk~g~~v~il~Dq~~~~~~gv~v~FfG~~a~t~~g~a~LA~~~~apvvp~~~~r~~~---------- 246 (310)
T PRK05646 179 --EREDVRGMLKLLRAGRAIWYAPDQDYGAKQSIFVPLFGIPAATVTATTKFARLGRARVIPFTQKRLAD---------- 246 (310)
T ss_pred --cHhhHHHHHHHHhCCCeEEEeCCCCCCCCCCEEecCCCCcchhhhHHHHHHHhhCCcEEEEEEEEeCC----------
Confidence 2235777888899997 6666654443332 33466 2 2444333 4999998865321
Q ss_pred ccccchhcccCCCCeEEEEEcccccC
Q 042170 463 KCLDPFFFLMNPSPGYTMQLLEGVSG 488 (543)
Q Consensus 463 ~~~d~~~~l~~P~~~v~V~fL~pi~~ 488 (543)
...++|+|.||++.
T Consensus 247 ------------g~~~~i~~~~~~~~ 260 (310)
T PRK05646 247 ------------GSGYRLVIHPPLED 260 (310)
T ss_pred ------------CCeEEEEEeCCCcC
Confidence 11488888888864
No 145
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=86.76 E-value=2 Score=49.85 Aligned_cols=83 Identities=19% Similarity=0.151 Sum_probs=66.3
Q ss_pred cCHHHHHHHH---hCC-cEEEEeCCcHHHHHHHHHhhCCCcEEEeceEEEeCeEEeeeeccCCC-cHHHHHHHHHHhcCC
Q 042170 147 VGLEIFEVLK---KGG-KTVAVSNMPQVMIDSFLRDYLDIDLVVGRELKVFCGYFVGLMEDKKK-NILVLQEIIKQENSG 221 (543)
Q Consensus 147 l~~ea~~~~~---~~g-~~v~VSAsp~~~vepfak~~lG~d~VlgTelev~~G~~TG~~~g~~~-g~~Kv~~l~~~~~~~ 221 (543)
++|++.++++ +.| +++++|.=-..-++.++++ +|+|++. .++ -++|.+-++++-...
T Consensus 446 ~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~e-lGId~v~-----------------A~~~PedK~~iV~~lQ~~G 507 (679)
T PRK01122 446 VKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAE-AGVDDFL-----------------AEATPEDKLALIRQEQAEG 507 (679)
T ss_pred CchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCcEEE-----------------ccCCHHHHHHHHHHHHHcC
Confidence 6888887666 678 9999998888889999998 9998642 234 378999998875444
Q ss_pred ceE-EEeCCCCCcchhcccccccCceeeccC
Q 042170 222 DVI-GISSLNSSLDHYKLFLQQCNEVYLVRS 251 (543)
Q Consensus 222 ~~~-aygD~~S~~D~~~m~L~~~~~~y~v~p 251 (543)
+.+ .-|| +..|-| - |+.|+-..+.+.
T Consensus 508 ~~VaMtGD--GvNDAP-A-La~ADVGIAMgs 534 (679)
T PRK01122 508 RLVAMTGD--GTNDAP-A-LAQADVGVAMNS 534 (679)
T ss_pred CeEEEECC--CcchHH-H-HHhCCEeEEeCC
Confidence 445 5699 999999 9 899999999984
No 146
>PRK08943 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; Validated
Probab=86.67 E-value=13 Score=38.76 Aligned_cols=154 Identities=12% Similarity=0.127 Sum_probs=87.1
Q ss_pred EEEEeccCCCCccccCcccccCCCceEEEecCCCCCcHHHHHHhh-cCceeEEeeeh--hhhhhhhh----cCceeEeec
Q 042170 324 RFTVITKPKTSRSFQNSRDCQKTERTLYVCNHRTLLDPLYLSFAL-KKNLTAVTYSL--SRMSEILA----PIKTVRMTR 396 (543)
Q Consensus 324 rv~v~G~~~~~~~~~~~~~~~~~~~~l~VaNH~S~LD~~vl~a~l-~~~~~~va~sl--~~v~~~l~----~i~tv~v~R 396 (543)
++++.|.+..... ...++|+|+++=|...++........ +.++..|.... ..+..++. ..|.-.+.
T Consensus 114 ~~~~~g~e~l~~a------~~~gkgvI~~t~H~gnwE~~~~~~~~~~~~~~~vyr~~~n~~~d~~~~~~R~~~g~~~i~- 186 (314)
T PRK08943 114 RVEWHGLEILEEA------RANGENVIFLVPHGWAIDIPAMLLASQGQPMAAMFHNQRNPLFDWLWNRVRRRFGGRLHA- 186 (314)
T ss_pred eEEEECHHHHHHH------HhCCCCEEEEEechhHHHHHHHHHHhcCCCccEEEeCCCCHHHHHHHHHHHhhcCCeeec-
Confidence 5777887654310 11257999999999888876544333 45666666432 22333332 22322332
Q ss_pred CchHHHHHHHHHHhCCC-eEEecCccccCCC-ccccc--c-----hhhhhcC----CceEEEEEEeccccccccccCCcc
Q 042170 397 NRDQDAKLVKSLLNQGD-LVICPEGTTCREP-YLLRF--S-----PLFAEMS----DNIIPVASNSHVTMFYGTTAGGLK 463 (543)
Q Consensus 397 ~r~~~~~~~~~~L~~G~-l~iFPEGTtt~g~-~Ll~F--~-----~~fa~l~----~pV~PVaI~~~~~~~~gt~~~~~~ 463 (543)
+.+..+++.+.|++|. +++-|--....+. .-.+| + ++.+.++ .||+|+.+.-..
T Consensus 187 -~~~~~r~i~kaLk~g~~v~il~Dq~~~~~~gv~v~FfG~~a~t~~g~a~LA~k~~apvvp~~~~R~~------------ 253 (314)
T PRK08943 187 -REDGIKPFISSVRQGYWGYYLPDEDHGPEHSVFVDFFATYKATLPGIGRLAKVCRARVVPLFPVYNG------------ 253 (314)
T ss_pred -CchhHHHHHHHHhCCCeEEEeCCCCCCCCCCEEeCCCCCchhHhHHHHHHHHHhCCeEEEEEEEEeC------------
Confidence 3456888999999997 6777666554332 34465 2 1333333 499999884321
Q ss_pred cccchhcccCCCCeEEEEEcccccCCcccCCCCCCHHHHHHHHHHHHHH
Q 042170 464 CLDPFFFLMNPSPGYTMQLLEGVSGLSMCQDGNESRFDVANYVQSELGK 512 (543)
Q Consensus 464 ~~d~~~~l~~P~~~v~V~fL~pi~~~~~~~~~~~~~~elA~~vq~~Ia~ 512 (543)
....|+|+|.+|++.. ..++..+.+++.-+.+.+
T Consensus 254 ----------~~~~~~i~~~~~~~~~-----~~~d~~~~t~~~~~~lE~ 287 (314)
T PRK08943 254 ----------KTHRLDIEIRPPMDDL-----LSADDETIARRMNEEVEQ 287 (314)
T ss_pred ----------CCCeEEEEEecCCCCC-----CCCCHHHHHHHHHHHHHH
Confidence 0114888898887641 123444555544444433
No 147
>PRK08706 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=86.66 E-value=9.4 Score=39.20 Aligned_cols=152 Identities=10% Similarity=0.133 Sum_probs=83.4
Q ss_pred EEEeccCCCCccccCcccccCCCceEEEecCCCCCcHHHHHHhhcCceeEEeeeh--hhhhhhhh----cCce-eEeecC
Q 042170 325 FTVITKPKTSRSFQNSRDCQKTERTLYVCNHRTLLDPLYLSFALKKNLTAVTYSL--SRMSEILA----PIKT-VRMTRN 397 (543)
Q Consensus 325 v~v~G~~~~~~~~~~~~~~~~~~~~l~VaNH~S~LD~~vl~a~l~~~~~~va~sl--~~v~~~l~----~i~t-v~v~R~ 397 (543)
+++.|.+..... ...++|+|+++-|...++..........+...+.... ..+.+++. ..|. ..+.
T Consensus 90 ~~~~~~e~l~~~------~~~gkgvI~~t~H~GnWEl~~~~~~~~~~~~~i~r~~~n~~~d~~~~~~R~~~g~~~i~~-- 161 (289)
T PRK08706 90 VRYRNKHYLDDA------LAAGEKVIILYPHFTAFEMAVYALNQDVPLISMYSHQKNKILDEQILKGRNRYHNVFLIG-- 161 (289)
T ss_pred eEEECHHHHHHH------HhCCCCEEEEecchhHHHHHHHHHHccCCCcEEeeCCCCHHHHHHHHHHHhccCCccccc--
Confidence 777887664310 1135799999999999999875444334555554321 22223322 2232 2223
Q ss_pred chHHHHHHHHHH-hCCC-eEEecCccccCC-Cccccc--c-----hhhhhcC----CceEEEEEEeccccccccccCCcc
Q 042170 398 RDQDAKLVKSLL-NQGD-LVICPEGTTCRE-PYLLRF--S-----PLFAEMS----DNIIPVASNSHVTMFYGTTAGGLK 463 (543)
Q Consensus 398 r~~~~~~~~~~L-~~G~-l~iFPEGTtt~g-~~Ll~F--~-----~~fa~l~----~pV~PVaI~~~~~~~~gt~~~~~~ 463 (543)
+.+..++|-+.| ++|. +++.+-=....+ +-..+| + .+.+.++ .||+|+.+....
T Consensus 162 ~~~~~r~i~k~L~k~~~~v~~l~Dq~~~~~~gv~v~FfG~~a~t~~g~a~LA~~~~apvvp~~~~R~~------------ 229 (289)
T PRK08706 162 RTEGLRALVKQFRKSSAPFLYLPDQDFGRNDSVFVDFFGIQTATITGLSRIAALANAKVIPAIPVREA------------ 229 (289)
T ss_pred ChhhHHHHHHHHHhCCceEEEeCCCCCCCCCCEEeccCCccchhhhHHHHHHHhcCCeEEEEEEEEcC------------
Confidence 344678888899 5776 566555443322 233455 2 2444443 499999886532
Q ss_pred cccchhcccCCCCeEEEEEcccccCCcccCCCCCCHHHHHHHHHHHHHH
Q 042170 464 CLDPFFFLMNPSPGYTMQLLEGVSGLSMCQDGNESRFDVANYVQSELGK 512 (543)
Q Consensus 464 ~~d~~~~l~~P~~~v~V~fL~pi~~~~~~~~~~~~~~elA~~vq~~Ia~ 512 (543)
...|++++.+|++.. ..++-.+.+++.-+.+.+
T Consensus 230 -----------~~~~~i~i~~~~~~~-----~~~~~~~~t~~~~~~lE~ 262 (289)
T PRK08706 230 -----------DNTVTLHFYPAWDSF-----PSEDAQADAQRMNRFIEE 262 (289)
T ss_pred -----------CCcEEEEEecCCCCC-----CCCCHHHHHHHHHHHHHH
Confidence 113788888887641 123444444444444333
No 148
>PRK08734 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=86.34 E-value=16 Score=38.01 Aligned_cols=118 Identities=8% Similarity=0.050 Sum_probs=68.5
Q ss_pred EEEeccCCCCccccCcccccCCCceEEEecCCCCCcHHHHHHhhcCceeEEeeeh--hhhhhhhh----cCceeEeecCc
Q 042170 325 FTVITKPKTSRSFQNSRDCQKTERTLYVCNHRTLLDPLYLSFALKKNLTAVTYSL--SRMSEILA----PIKTVRMTRNR 398 (543)
Q Consensus 325 v~v~G~~~~~~~~~~~~~~~~~~~~l~VaNH~S~LD~~vl~a~l~~~~~~va~sl--~~v~~~l~----~i~tv~v~R~r 398 (543)
+++.|.+..... ...++|+|+++-|...+|..........|+..|.... ..+..++. ..|.-.+. ..
T Consensus 97 ~~~~g~e~l~~~------~~~gkgvI~lt~H~GnwE~~~~~~~~~~~~~~vyr~~~n~~~d~~~~~~R~~~g~~~i~-~~ 169 (305)
T PRK08734 97 RQRHGQELYDAA------LASGRGVIVAAPHFGNWELLNQWLSERGPIAIVYRPPESEAVDGFLQLVRGGDNVRQVR-AE 169 (305)
T ss_pred EEecCHHHHHHH------HHcCCCEEEEccccchHHHHHHHHHccCCceEEEeCCCCHHHHHHHHHHhccCCCeeec-CC
Confidence 566777654310 0125799999999999999875544335666665322 22333332 22333342 22
Q ss_pred hHHHHHHHHHHhCCC-eEEecCccccC-CCccccc--c-----hhhhhcC----CceEEEEEEe
Q 042170 399 DQDAKLVKSLLNQGD-LVICPEGTTCR-EPYLLRF--S-----PLFAEMS----DNIIPVASNS 449 (543)
Q Consensus 399 ~~~~~~~~~~L~~G~-l~iFPEGTtt~-g~~Ll~F--~-----~~fa~l~----~pV~PVaI~~ 449 (543)
....++|.+.|++|. +.+-|.=.... ++.-.+| + .+.+.++ .||+|+.+.-
T Consensus 170 ~~~~r~li~~Lk~g~~v~~l~Dq~~~~~~gv~v~FfG~~a~t~~g~a~LA~~~~apVvp~~~~R 233 (305)
T PRK08734 170 GPAVRQLFKVLKDGGAVGILPDQQPKMGDGVFAPFFGIPALTMTLVNRLAERTGATVLYGWCER 233 (305)
T ss_pred chhHHHHHHHHhcCCeEEEeCCCCCCCCCCeEeccCCCccchhhHHHHHHHHhCCeEEEEEEEE
Confidence 346888999999997 66776655432 2233455 2 2333333 4999988754
No 149
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=85.39 E-value=2.4 Score=49.09 Aligned_cols=84 Identities=14% Similarity=0.196 Sum_probs=67.0
Q ss_pred hcCHHHHHHHH---hCC-cEEEEeCCcHHHHHHHHHhhCCCcEEEeceEEEeCeEEeeeeccCCC-cHHHHHHHHHHhcC
Q 042170 146 NVGLEIFEVLK---KGG-KTVAVSNMPQVMIDSFLRDYLDIDLVVGRELKVFCGYFVGLMEDKKK-NILVLQEIIKQENS 220 (543)
Q Consensus 146 ~l~~ea~~~~~---~~g-~~v~VSAsp~~~vepfak~~lG~d~VlgTelev~~G~~TG~~~g~~~-g~~Kv~~l~~~~~~ 220 (543)
-++|++.+.++ +.| +++++|.=-..-++.++++ +|+|.+. .++ -++|.+-++++-..
T Consensus 441 p~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~e-lGI~~v~-----------------A~~~PedK~~iV~~lQ~~ 502 (673)
T PRK14010 441 VIKDGLVERFRELREMGIETVMCTGDNELTAATIAKE-AGVDRFV-----------------AECKPEDKINVIREEQAK 502 (673)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCceEE-----------------cCCCHHHHHHHHHHHHhC
Confidence 37888887666 678 9999998888899999998 9998532 234 37899999887544
Q ss_pred CceEEE-eCCCCCcchhcccccccCceeeccC
Q 042170 221 GDVIGI-SSLNSSLDHYKLFLQQCNEVYLVRS 251 (543)
Q Consensus 221 ~~~~ay-gD~~S~~D~~~m~L~~~~~~y~v~p 251 (543)
.+.+|+ || .-.|.| - |+.|+-..+++.
T Consensus 503 G~~VaMtGD--GvNDAP-A-La~ADVGIAMgs 530 (673)
T PRK14010 503 GHIVAMTGD--GTNDAP-A-LAEANVGLAMNS 530 (673)
T ss_pred CCEEEEECC--ChhhHH-H-HHhCCEEEEeCC
Confidence 455655 99 999999 8 799999999984
No 150
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=84.55 E-value=0.5 Score=44.57 Aligned_cols=19 Identities=26% Similarity=0.448 Sum_probs=13.8
Q ss_pred eEEEEEcCCccccCCCchH
Q 042170 64 RTLIFNVEGFLLKSSSLFP 82 (543)
Q Consensus 64 ~~a~FD~DGTLl~~~s~fp 82 (543)
|+|+||+||||++..|--+
T Consensus 1 Kia~fD~DgTLi~~~s~~~ 19 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKSGKK 19 (159)
T ss_dssp SEEEE-SCTTTEE-STSTT
T ss_pred CEEEEeCCCCccCCCCCCc
Confidence 5899999999998876443
No 151
>TIGR02207 lipid_A_htrB lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase. This model represents a narrow clade of acyltransferases, nearly all of which transfer a lauroyl group to KDO2-lipid IV-A, a lipid A precursor; these proteins are termed lipid A biosynthesis lauroyl acyltransferase, HtrB. An exception is a closely related paralog of E. coli HtrB, LpxP, which acts in cold shock conditions by transferring a palmitoleoyl rather than lauroyl group to the lipid A precursor. Members of this family are homologous to the family of acyltransferases responsible for the next step in lipid A biosynthesis.
Probab=84.13 E-value=12 Score=38.61 Aligned_cols=156 Identities=13% Similarity=0.159 Sum_probs=86.7
Q ss_pred eEEEEeccCCCCccccCcccccCCCceEEEecCCCCCcHHHHHHhhcCceeEEeeeh--hhhhhhh----hcCceeEeec
Q 042170 323 LRFTVITKPKTSRSFQNSRDCQKTERTLYVCNHRTLLDPLYLSFALKKNLTAVTYSL--SRMSEIL----APIKTVRMTR 396 (543)
Q Consensus 323 vrv~v~G~~~~~~~~~~~~~~~~~~~~l~VaNH~S~LD~~vl~a~l~~~~~~va~sl--~~v~~~l----~~i~tv~v~R 396 (543)
-++++.|.+..... ...++|+|+++-|...++..........++..+.+.. ..+..++ ...|.-.+.+
T Consensus 102 ~~v~i~g~e~l~~a------~~~gkgvI~lt~H~GnwE~~~~~~~~~~~~~~vyr~~~n~~~d~l~~~~R~~~g~~~i~~ 175 (303)
T TIGR02207 102 KWMQIEGLEHLQRA------QKQGRGVLLVGVHFLTLELGARIFGQQQPGIGVYRPHNNPLFDWIQTRGRLRSNKAMIDR 175 (303)
T ss_pred CcEEEECHHHHHHH------HhcCCCEEEEecchhHHHHHHHHHHccCCCeEEEeCCCCHHHHHHHHHHHHhcCCcccCc
Confidence 36788887764310 1125799999999999999865444334555554321 2222222 1223223332
Q ss_pred CchHHHHHHHHHHhCCC-eEEecCccccCC-Cccccc--------chhhhhcC----CceEEEEEEeccccccccccCCc
Q 042170 397 NRDQDAKLVKSLLNQGD-LVICPEGTTCRE-PYLLRF--------SPLFAEMS----DNIIPVASNSHVTMFYGTTAGGL 462 (543)
Q Consensus 397 ~r~~~~~~~~~~L~~G~-l~iFPEGTtt~g-~~Ll~F--------~~~fa~l~----~pV~PVaI~~~~~~~~gt~~~~~ 462 (543)
++.+.+.+.|++|. +++-+.-....+ ....+| ..+.+.++ .||+|+.+.....
T Consensus 176 ---~~~r~i~~~Lk~g~~v~il~Dq~~~~~~g~~v~FfG~~~a~~~~g~a~LA~~~~apvip~~~~r~~~---------- 242 (303)
T TIGR02207 176 ---KDLRGMIKALKNGERIWYAPDHDYGRKSSVFVPFFAVPDAATTTGTSILARLSKCAVVPFTPRRNED---------- 242 (303)
T ss_pred ---ccHHHHHHHHhCCCeEEEeCCCCCCCCCcEEeCCCCCCcchhHHHHHHHHHHhCCeEEEEEEEEeCC----------
Confidence 23778889999997 667665443322 223344 22444343 4999998865321
Q ss_pred ccccchhcccCCCCeEEEEEcccccCCcccCCCCCCHHHHHHHHHHHHHHHh
Q 042170 463 KCLDPFFFLMNPSPGYTMQLLEGVSGLSMCQDGNESRFDVANYVQSELGKAL 514 (543)
Q Consensus 463 ~~~d~~~~l~~P~~~v~V~fL~pi~~~~~~~~~~~~~~elA~~vq~~Ia~~L 514 (543)
...|+|+|.+|++.. ..++..+.+++.-+.+.+..
T Consensus 243 ------------~~~~~i~~~~~~~~~-----~~~~~~~~t~~~~~~lE~~I 277 (303)
T TIGR02207 243 ------------GSGYRLKIDPPLDDF-----PGDDEIAAAARMNKIVEKMI 277 (303)
T ss_pred ------------CCeEEEEEeCCCCCC-----CCCCHHHHHHHHHHHHHHHH
Confidence 114888888887641 13445555555444444433
No 152
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=83.81 E-value=5.3 Score=37.50 Aligned_cols=96 Identities=13% Similarity=0.218 Sum_probs=54.5
Q ss_pred HHHHHHhCC-cEEEEeCCcHHHHH---HHHHhh--CC--CcEEEeceEEEeCeEE----eeeeccCCCcHHHH---HHHH
Q 042170 151 IFEVLKKGG-KTVAVSNMPQVMID---SFLRDY--LD--IDLVVGRELKVFCGYF----VGLMEDKKKNILVL---QEII 215 (543)
Q Consensus 151 a~~~~~~~g-~~v~VSAsp~~~ve---pfak~~--lG--~d~VlgTelev~~G~~----TG~~~g~~~g~~Kv---~~l~ 215 (543)
+++.+++.| +++++|+.|..+++ +|+++. .| +. .| .+-..+|.+ ++++.......-|. +.|.
T Consensus 35 a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp--~g-~li~~~g~~~~~~~~e~i~~~~~~~K~~~l~~i~ 111 (157)
T smart00775 35 LYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLP--HG-PVLLSPDRLFAALHREVISKKPEVFKIACLRDIK 111 (157)
T ss_pred HHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCC--Cc-eEEEcCCcchhhhhcccccCCHHHHHHHHHHHHH
Confidence 345556677 88889999999885 788762 12 21 01 222234433 33333333222344 4555
Q ss_pred HHhcCC--ce-EEEeCCCCCcchhcccccccC----ceeeccCCc
Q 042170 216 KQENSG--DV-IGISSLNSSLDHYKLFLQQCN----EVYLVRSTD 253 (543)
Q Consensus 216 ~~~~~~--~~-~aygD~~S~~D~~~m~L~~~~----~~y~v~p~~ 253 (543)
+++..+ +- .|||| ..+|.. .+ +.++ +-|.|||..
T Consensus 112 ~~~~~~~~~f~~~~gn--~~~D~~-~y-~~~gi~~~~i~~i~~~~ 152 (157)
T smart00775 112 SLFPPQGNPFYAGFGN--RITDVI-SY-SAVGIPPSRIFTINPKG 152 (157)
T ss_pred HhcCCCCCCEEEEeCC--CchhHH-HH-HHcCCChhhEEEECCCC
Confidence 555532 33 37998 899987 64 5554 558888744
No 153
>PRK08733 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=83.42 E-value=17 Score=37.68 Aligned_cols=117 Identities=13% Similarity=0.120 Sum_probs=67.1
Q ss_pred EEEEeccCCCCccccCcccccCCCceEEEecCCCCCcHHHHHHhhcCceeEEeeeh--hhhhhhhh----cCceeEeecC
Q 042170 324 RFTVITKPKTSRSFQNSRDCQKTERTLYVCNHRTLLDPLYLSFALKKNLTAVTYSL--SRMSEILA----PIKTVRMTRN 397 (543)
Q Consensus 324 rv~v~G~~~~~~~~~~~~~~~~~~~~l~VaNH~S~LD~~vl~a~l~~~~~~va~sl--~~v~~~l~----~i~tv~v~R~ 397 (543)
++++.|.+..... ...++|+|+++-|...++..........++..|.+.. ..+..++. ..|.-.+.
T Consensus 109 ~v~v~g~e~l~~a------~~~gkgvI~~t~H~GnWE~~~~~~~~~~~~~~vyr~~~n~~~d~~i~~~R~~~g~~~i~-- 180 (306)
T PRK08733 109 GVQIEGLEHLQQL------QQQGRGVLLVSGHFMTLEMCGRLLCDHVPLAGMYRRHRNPVFEWAVKRGRLRYATHMFA-- 180 (306)
T ss_pred cEEEeCHHHHHHH------HhCCCCEEEEecCchHHHHHHHHHHccCCceEEEeCCCCHHHHHHHHHHHhhcCCcCcC--
Confidence 5778887664310 1125799999999999999764443334555554322 12222322 22322332
Q ss_pred chHHHHHHHHHHhCCC-eEEecCccccCC-Cccccc--ch-----hhhhcC----CceEEEEEEe
Q 042170 398 RDQDAKLVKSLLNQGD-LVICPEGTTCRE-PYLLRF--SP-----LFAEMS----DNIIPVASNS 449 (543)
Q Consensus 398 r~~~~~~~~~~L~~G~-l~iFPEGTtt~g-~~Ll~F--~~-----~fa~l~----~pV~PVaI~~ 449 (543)
++..+++-+.|++|. +++-|-=....+ +...+| ++ +.+.++ .||+|+.+..
T Consensus 181 -~~~~r~~~kaLk~g~~v~il~Dq~~~~~~gv~v~FfG~~a~t~~g~a~LA~~~~apvvp~~~~r 244 (306)
T PRK08733 181 -NEDLRATIKHLKRGGFLWYAPDQDMRGKDTVFVPFFGHPASTITATHQLARLTGCAVVPYFHRR 244 (306)
T ss_pred -cccHHHHHHHHhCCCeEEEeCCCCCCCCCcEEeCCCCCchhHHHHHHHHHHHhCCeEEEEEEEE
Confidence 234788889999997 667765544323 234566 22 333333 4999998843
No 154
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=82.85 E-value=2.6 Score=49.09 Aligned_cols=87 Identities=16% Similarity=0.144 Sum_probs=68.0
Q ss_pred HHhcCHHHHHHHH---hCC-cEEEEeCCcHHHHHHHHHhhCCCcEEEeceEEEeCeEEeeeeccCCCcHHHHHHHHHHhc
Q 042170 144 LENVGLEIFEVLK---KGG-KTVAVSNMPQVMIDSFLRDYLDIDLVVGRELKVFCGYFVGLMEDKKKNILVLQEIIKQEN 219 (543)
Q Consensus 144 ~e~l~~ea~~~~~---~~g-~~v~VSAsp~~~vepfak~~lG~d~VlgTelev~~G~~TG~~~g~~~g~~Kv~~l~~~~~ 219 (543)
.+.+++++.+.++ +.| +++++|.=-+--++..+++ ||+|+|.+- .+ -++|++.++++-.
T Consensus 535 ~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~-lGId~v~Ae-----------ll-----PedK~~~V~~l~~ 597 (713)
T COG2217 535 ADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKE-LGIDEVRAE-----------LL-----PEDKAEIVRELQA 597 (713)
T ss_pred eCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cChHhhecc-----------CC-----cHHHHHHHHHHHh
Confidence 3448888887666 678 9899999999999999998 999866542 11 2689999988864
Q ss_pred CC-ceEEEeCCCCCcchhcccccccCceeeccC
Q 042170 220 SG-DVIGISSLNSSLDHYKLFLQQCNEVYLVRS 251 (543)
Q Consensus 220 ~~-~~~aygD~~S~~D~~~m~L~~~~~~y~v~p 251 (543)
.. .....|| ..+|-| = |+.++-..++..
T Consensus 598 ~g~~VamVGD--GINDAP-A-LA~AdVGiAmG~ 626 (713)
T COG2217 598 EGRKVAMVGD--GINDAP-A-LAAADVGIAMGS 626 (713)
T ss_pred cCCEEEEEeC--CchhHH-H-HhhcCeeEeecC
Confidence 43 3446799 999999 8 799998888864
No 155
>PLN02811 hydrolase
Probab=82.77 E-value=15 Score=35.77 Aligned_cols=90 Identities=7% Similarity=-0.029 Sum_probs=44.3
Q ss_pred cCHHHHHHHH---hCC-cEEEEeCCcHHHHHHHHHhhCCCcEEEeceEEEeCeEEeee--eccCCC-cHHHHHHHHHHhc
Q 042170 147 VGLEIFEVLK---KGG-KTVAVSNMPQVMIDSFLRDYLDIDLVVGRELKVFCGYFVGL--MEDKKK-NILVLQEIIKQEN 219 (543)
Q Consensus 147 l~~ea~~~~~---~~g-~~v~VSAsp~~~vepfak~~lG~d~VlgTelev~~G~~TG~--~~g~~~-g~~Kv~~l~~~~~ 219 (543)
+.|.+.+.++ +.| +..+||++++.++.-.+.++.+.+. ..+..+++. -.+... .++-.....+.++
T Consensus 79 l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~-------~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~ 151 (220)
T PLN02811 79 LMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFS-------LMHHVVTGDDPEVKQGKPAPDIFLAAARRFE 151 (220)
T ss_pred CCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHh-------hCCEEEECChhhccCCCCCcHHHHHHHHHhC
Confidence 4566666555 667 8889998886544322222222210 112222222 111111 2334444444443
Q ss_pred ---C--CceEEEeCCCCCcchhcccccccCcee
Q 042170 220 ---S--GDVIGISSLNSSLDHYKLFLQQCNEVY 247 (543)
Q Consensus 220 ---~--~~~~aygD~~S~~D~~~m~L~~~~~~y 247 (543)
- +..+..|| +..|.. . -..+|-+.
T Consensus 152 ~~~~~~~~~v~IgD--s~~di~-a-A~~aG~~~ 180 (220)
T PLN02811 152 DGPVDPGKVLVFED--APSGVE-A-AKNAGMSV 180 (220)
T ss_pred CCCCCccceEEEec--cHhhHH-H-HHHCCCeE
Confidence 2 25789999 888987 5 34455443
No 156
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=82.62 E-value=1.4 Score=52.62 Aligned_cols=100 Identities=11% Similarity=0.134 Sum_probs=68.8
Q ss_pred cCHHHHHHHH---hCC-cEEEEeCCcHHHHHHHHHhhCCCc---EEEeceEEEe-CeEEeeeeccCC----C-cHHHHHH
Q 042170 147 VGLEIFEVLK---KGG-KTVAVSNMPQVMIDSFLRDYLDID---LVVGRELKVF-CGYFVGLMEDKK----K-NILVLQE 213 (543)
Q Consensus 147 l~~ea~~~~~---~~g-~~v~VSAsp~~~vepfak~~lG~d---~VlgTelev~-~G~~TG~~~g~~----~-g~~Kv~~ 213 (543)
+++++-+.++ +.| +++++|.--..-++.++++ +|++ .+.|.+++.. +.-+...+.... + -++|.+-
T Consensus 516 ~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~-lGI~~~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~~i 594 (867)
T TIGR01524 516 PKESTKEAIAALFKNGINVKVLTGDNEIVTARICQE-VGIDANDFLLGADIEELSDEELARELRKYHIFARLTPMQKSRI 594 (867)
T ss_pred CchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCCCCeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHHHHH
Confidence 6777777666 678 8899998888899999998 9996 4555555431 111111111111 2 2678887
Q ss_pred HHHHhcCCceE-EEeCCCCCcchhcccccccCceeeccC
Q 042170 214 IIKQENSGDVI-GISSLNSSLDHYKLFLQQCNEVYLVRS 251 (543)
Q Consensus 214 l~~~~~~~~~~-aygD~~S~~D~~~m~L~~~~~~y~v~p 251 (543)
++++-...+.+ ..|| +..|.| . |+.|+-..++..
T Consensus 595 V~~lq~~G~vVam~GD--GvNDap-A-Lk~AdVGIAmg~ 629 (867)
T TIGR01524 595 IGLLKKAGHTVGFLGD--GINDAP-A-LRKADVGISVDT 629 (867)
T ss_pred HHHHHhCCCEEEEECC--CcccHH-H-HHhCCEEEEeCC
Confidence 77764433445 5699 999999 9 899999999974
No 157
>PRK08025 lipid A biosynthesis palmitoleoyl acyltransferase; Reviewed
Probab=82.59 E-value=21 Score=37.05 Aligned_cols=118 Identities=14% Similarity=0.090 Sum_probs=67.2
Q ss_pred eEEEEeccCCCCccccCcccccCCCceEEEecCCCCCcHHHHHHhhcCceeEEeeehh--hhhhhh----hcCceeEeec
Q 042170 323 LRFTVITKPKTSRSFQNSRDCQKTERTLYVCNHRTLLDPLYLSFALKKNLTAVTYSLS--RMSEIL----APIKTVRMTR 396 (543)
Q Consensus 323 vrv~v~G~~~~~~~~~~~~~~~~~~~~l~VaNH~S~LD~~vl~a~l~~~~~~va~sl~--~v~~~l----~~i~tv~v~R 396 (543)
-++++.|.+..... ...++|+|+++=|...++..........++..+..... .+..++ ...|.-.+.
T Consensus 106 ~~v~~~g~e~l~~a------~~~gkgvI~lt~H~GnwE~~~~~l~~~~~~~~vyr~~~n~~~d~~~~~~R~~~g~~~i~- 178 (305)
T PRK08025 106 KWFDVEGLDNLKRA------QMQNRGVMVVGVHFMSLELGGRVMGLCQPMMATYRPHNNKLMEWVQTRGRMRSNKAMIG- 178 (305)
T ss_pred CeEEEECHHHHHHH------HhCCCCEEEEecchhHHHHHHHHHHccCCCeEEEeCCCCHHHHHHHHHHHhccCCcCcC-
Confidence 36788887764310 01257999999999999997654443346666654322 122222 222333343
Q ss_pred CchHHHHHHHHHHhCCC-eEEecCccccCC-Cccccc--------chhhhhcC----CceEEEEEEe
Q 042170 397 NRDQDAKLVKSLLNQGD-LVICPEGTTCRE-PYLLRF--------SPLFAEMS----DNIIPVASNS 449 (543)
Q Consensus 397 ~r~~~~~~~~~~L~~G~-l~iFPEGTtt~g-~~Ll~F--------~~~fa~l~----~pV~PVaI~~ 449 (543)
+ ++.+++.+.|++|. +++-|-=....+ +...+| ..+.+.++ .||+|+.+..
T Consensus 179 -~-~~~r~~~~aLk~g~~v~il~DQ~~~~~~gv~v~FfG~~~a~t~~g~~~LA~~~~apvvp~~~~R 243 (305)
T PRK08025 179 -R-NNLRGIVGALKKGEAVWFAPDQDYGPKGSSFAPFFAVENVATTNGTYVLSRLSGAAMLTVTMVR 243 (305)
T ss_pred -c-ccHHHHHHHHhCCCeEEEeCCCCCCCCCCeEeCCCCCcchhHHHHHHHHHHhhCCeEEEEEEEE
Confidence 2 24778889999997 666654333222 233344 22333333 3999998854
No 158
>PLN02887 hydrolase family protein
Probab=81.36 E-value=8.2 Score=44.02 Aligned_cols=67 Identities=13% Similarity=0.113 Sum_probs=38.7
Q ss_pred HHHHHhCC-cEEEEeCCcHHHHHHHHHhhCCCc---EEEec--eEEEeCeEE----eeeeccCCC-cHHHHHHHHHHhc
Q 042170 152 FEVLKKGG-KTVAVSNMPQVMIDSFLRDYLDID---LVVGR--ELKVFCGYF----VGLMEDKKK-NILVLQEIIKQEN 219 (543)
Q Consensus 152 ~~~~~~~g-~~v~VSAsp~~~vepfak~~lG~d---~VlgT--elev~~G~~----TG~~~g~~~-g~~Kv~~l~~~~~ 219 (543)
++.+++.| ++++.|+=+...+.+++++ +|++ .+|+- -.-..||-+ .|...-... ..+-+..+.+...
T Consensus 334 I~kl~ekGi~~vIATGR~~~~i~~~l~~-L~l~~~~~~I~~~~p~I~~NGA~I~d~~g~~I~~~~L~~e~v~eIi~~~~ 411 (580)
T PLN02887 334 LKEALSRGVKVVIATGKARPAVIDILKM-VDLAGKDGIISESSPGVFLQGLLVYGRQGREIYRSNLDQEVCREACLYSL 411 (580)
T ss_pred HHHHHHCCCeEEEEcCCCHHHHHHHHHH-hCcccccceEeecccEEeecCeEEEECCCcEEEEEeCCHHHHHHHHHHHH
Confidence 34455667 8888898888888888886 7764 45542 122235543 233222222 3566666666543
No 159
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=79.27 E-value=4.8 Score=40.45 Aligned_cols=117 Identities=13% Similarity=0.148 Sum_probs=72.4
Q ss_pred EEEEcCCccccCCCchHHHHHHHHhhcc-hHHHHHHHHHHH-HHH-hcc-----cchhHHHHH-HHHhcCcccchhH-HH
Q 042170 66 LIFNVEGFLLKSSSLFPYFMLVAFEAGG-LIRAFLLFILYP-LIC-LAG-----EEMGLKIMV-MVSFFWVKKDNFR-VG 135 (543)
Q Consensus 66 a~FD~DGTLl~~~s~fp~f~~~a~~~~~-~~r~~~ll~~~p-~~~-~l~-----~~~~~k~~~-~~~f~G~~~~~~~-va 135 (543)
.++|.+|-+.-.|-.|-.-+. .+..|. |++-+ .-|- .++ -.. ...-+|..+ |..-.|.+.++++ ++
T Consensus 3 fvtD~EGP~sl~D~A~E~~a~-~~pngrrfF~~~---SeyDD~la~E~rReGYeaG~TLkLivPFL~ahGVt~~dlrr~s 78 (315)
T COG4030 3 FVTDWEGPWSLTDFALELCAA-VFPNGRRFFSNL---SEYDDYLAYEVRREGYEAGYTLKLIVPFLAAHGVTNRDLRRIS 78 (315)
T ss_pred ccccCCCCCccchhHHHHHHH-HcCCHHHHHHhh---hhhhhHHHHHHhccCCCCCcchhhHHHHHHHhcCcHHHHHHHH
Confidence 589999999888766654322 233333 54432 2332 222 111 123345332 3333499999999 87
Q ss_pred HhhchhhHHHhcCHHHHHHHHhCC---cEEEEeCCcHHHHHHHHHhhCCC--cEEEeceEEEe
Q 042170 136 RAVLPKFFLENVGLEIFEVLKKGG---KTVAVSNMPQVMIDSFLRDYLDI--DLVVGRELKVF 193 (543)
Q Consensus 136 ~avlpk~~~e~l~~ea~~~~~~~g---~~v~VSAsp~~~vepfak~~lG~--d~VlgTelev~ 193 (543)
+..+ .+-|.|-+.++..+ .-+++|.|=+-+++..++ ++|+ .++-||++-..
T Consensus 79 E~sa------~lvPgA~etm~~l~~~~tp~v~STSY~qy~~r~a~-~ig~Prg~~~~Te~~lD 134 (315)
T COG4030 79 ELSA------KLVPGAEETMATLQERWTPVVISTSYTQYLRRTAS-MIGVPRGELHGTEVDLD 134 (315)
T ss_pred Hhhc------ccCCChHHHHHHHhccCCceEEeccHHHHHHHHHH-hcCCCccccccccccCc
Confidence 7422 25566666666333 568999999999999988 5998 48889988653
No 160
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=78.95 E-value=6 Score=46.43 Aligned_cols=83 Identities=8% Similarity=0.053 Sum_probs=63.0
Q ss_pred HhcCHHHHHHHH---hCC-cEEEEeCCcHHHHHHHHHhhCCCcEEEeceEEEeCeEEeeeeccCCC-cHHHHHHHHHHhc
Q 042170 145 ENVGLEIFEVLK---KGG-KTVAVSNMPQVMIDSFLRDYLDIDLVVGRELKVFCGYFVGLMEDKKK-NILVLQEIIKQEN 219 (543)
Q Consensus 145 e~l~~ea~~~~~---~~g-~~v~VSAsp~~~vepfak~~lG~d~VlgTelev~~G~~TG~~~g~~~-g~~Kv~~l~~~~~ 219 (543)
+.+++++.+.++ +.| +++++|.-...-++.++++ +|++.. .++ -++|.+.++++-.
T Consensus 567 d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~-lgi~~~------------------~~~~p~~K~~~v~~l~~ 627 (741)
T PRK11033 567 DTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGE-LGIDFR------------------AGLLPEDKVKAVTELNQ 627 (741)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCee------------------cCCCHHHHHHHHHHHhc
Confidence 347888777665 678 8889999999999999997 999721 123 3679998888753
Q ss_pred CCceEEEeCCCCCcchhcccccccCceeecc
Q 042170 220 SGDVIGISSLNSSLDHYKLFLQQCNEVYLVR 250 (543)
Q Consensus 220 ~~~~~aygD~~S~~D~~~m~L~~~~~~y~v~ 250 (543)
.+.....|| +..|.| + |+.++-...+.
T Consensus 628 ~~~v~mvGD--giNDap-A-l~~A~vgia~g 654 (741)
T PRK11033 628 HAPLAMVGD--GINDAP-A-MKAASIGIAMG 654 (741)
T ss_pred CCCEEEEEC--CHHhHH-H-HHhCCeeEEec
Confidence 334456799 999999 9 79998777764
No 161
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=78.69 E-value=1.7 Score=42.38 Aligned_cols=74 Identities=16% Similarity=0.192 Sum_probs=44.4
Q ss_pred eCCcHHHHHHHHHhhCCCcEEEeceEEEe-CeEEeeeeccCCCcHHHHHHHHHHh---cCC--ceEEEeCCCCCcchhcc
Q 042170 165 SNMPQVMIDSFLRDYLDIDLVVGRELKVF-CGYFVGLMEDKKKNILVLQEIIKQE---NSG--DVIGISSLNSSLDHYKL 238 (543)
Q Consensus 165 SAsp~~~vepfak~~lG~d~VlgTelev~-~G~~TG~~~g~~~g~~Kv~~l~~~~---~~~--~~~aygD~~S~~D~~~m 238 (543)
+..+...++..+++ ++.+ +.+. .+.+ -.+..+++ .|..+++.+. +-. ..+++|| |..|.+ |
T Consensus 122 ~~~~~~~~~~~l~~-~~~~------~~~~~~~~~-~ei~~~~~--~Kg~al~~l~~~~~i~~~~~i~~GD--~~NDi~-m 188 (230)
T PRK01158 122 RTVPVEEVRELLEE-LGLD------LEIVDSGFA-IHIKSPGV--NKGTGLKKLAELMGIDPEEVAAIGD--SENDLE-M 188 (230)
T ss_pred ccccHHHHHHHHHH-cCCc------EEEEecceE-EEEeeCCC--ChHHHHHHHHHHhCCCHHHEEEECC--chhhHH-H
Confidence 44455556666664 4432 2222 2222 23333444 3666666554 322 5789999 999999 9
Q ss_pred cccccCceeeccCC
Q 042170 239 FLQQCNEVYLVRST 252 (543)
Q Consensus 239 ~L~~~~~~y~v~p~ 252 (543)
++.|+.++++..+
T Consensus 189 -~~~ag~~vam~Na 201 (230)
T PRK01158 189 -FEVAGFGVAVANA 201 (230)
T ss_pred -HHhcCceEEecCc
Confidence 6999999999543
No 162
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=78.66 E-value=0.94 Score=42.92 Aligned_cols=51 Identities=8% Similarity=0.160 Sum_probs=28.4
Q ss_pred eeeccCCCcHHHHHHHHHHhcC---C--c-eEEEeCCCCCcchhcccccccC----ceeeccCCc
Q 042170 199 GLMEDKKKNILVLQEIIKQENS---G--D-VIGISSLNSSLDHYKLFLQQCN----EVYLVRSTD 253 (543)
Q Consensus 199 G~~~g~~~g~~Kv~~l~~~~~~---~--~-~~aygD~~S~~D~~~m~L~~~~----~~y~v~p~~ 253 (543)
..+..++-.+-|...|+.+... . + .-|||+ +..|.. -+ +.++ .-|.|||..
T Consensus 92 rEvi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN--~~tDv~-aY-~~vGip~~rIF~I~~~g 152 (157)
T PF08235_consen 92 REVISKDPEEFKIACLRDLRALFPPDGNPFYAGFGN--RSTDVI-AY-KAVGIPKSRIFIINPKG 152 (157)
T ss_pred ccccccChHHHHHHHHHHHHHhcCCCCCeEEEecCC--cHHHHH-HH-HHcCCChhhEEEECCCC
Confidence 3333333345677666655432 2 2 239999 888875 42 4444 447777743
No 163
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=78.37 E-value=12 Score=35.28 Aligned_cols=93 Identities=23% Similarity=0.258 Sum_probs=54.2
Q ss_pred HHHHHhCC-cEEEEeCC---------------cHHHHHHHHHhhCCCcEEEeceEEEeCeEEee-----eeccCCC-cHH
Q 042170 152 FEVLKKGG-KTVAVSNM---------------PQVMIDSFLRDYLDIDLVVGRELKVFCGYFVG-----LMEDKKK-NIL 209 (543)
Q Consensus 152 ~~~~~~~g-~~v~VSAs---------------p~~~vepfak~~lG~d~VlgTelev~~G~~TG-----~~~g~~~-g~~ 209 (543)
++.+++.| ++++||.. +..+++..+++ +|+. .++.+.| .-.+... ..+
T Consensus 38 L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~-~gl~---------fd~ii~~~~~~~~~~~~~KP~~~ 107 (161)
T TIGR01261 38 LLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRS-QGII---------FDDVLICPHFPDDNCDCRKPKIK 107 (161)
T ss_pred HHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHH-CCCc---------eeEEEECCCCCCCCCCCCCCCHH
Confidence 45556777 88899975 56677777775 7764 1122211 1110111 245
Q ss_pred HHHHHHHHhcCC--ceEEEeCCCCCcchhcccccccCceeeccCCcccCCc
Q 042170 210 VLQEIIKQENSG--DVIGISSLNSSLDHYKLFLQQCNEVYLVRSTDKRSWQ 258 (543)
Q Consensus 210 Kv~~l~~~~~~~--~~~aygD~~S~~D~~~m~L~~~~~~y~v~p~~~~~w~ 258 (543)
....+.+..+-. ..+.+|| +..|.. . -..++-..+.-...+-+|.
T Consensus 108 ~~~~~~~~~~~~~~e~l~IGD--~~~Di~-~-A~~aGi~~i~~~~~~~~~~ 154 (161)
T TIGR01261 108 LLEPYLKKNLIDKARSYVIGD--RETDMQ-L-AENLGIRGIQYDEEELNWD 154 (161)
T ss_pred HHHHHHHHcCCCHHHeEEEeC--CHHHHH-H-HHHCCCeEEEEChhhcCHH
Confidence 666666665533 6789999 889988 7 5667655444333444565
No 164
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=77.90 E-value=6.2 Score=45.65 Aligned_cols=30 Identities=23% Similarity=0.187 Sum_probs=22.7
Q ss_pred HHHHhCC-cEEEEeCCcHHHHHHHHHhhCCCc
Q 042170 153 EVLKKGG-KTVAVSNMPQVMIDSFLRDYLDID 183 (543)
Q Consensus 153 ~~~~~~g-~~v~VSAsp~~~vepfak~~lG~d 183 (543)
+.+++.| .++++|+=+...+++++++ +|++
T Consensus 443 ~~L~ekGI~~VIATGRs~~~i~~l~~~-Lgl~ 473 (694)
T PRK14502 443 RLLKDKELPLVFCSAKTMGEQDLYRNE-LGIK 473 (694)
T ss_pred HHHHHcCCeEEEEeCCCHHHHHHHHHH-cCCC
Confidence 3445667 7778898888888998886 8875
No 165
>PRK05645 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=77.14 E-value=74 Score=32.71 Aligned_cols=119 Identities=9% Similarity=0.040 Sum_probs=64.3
Q ss_pred EEEEeccCCCCccccCcccccCCCceEEEecCCCCCcHHHHHHhhcCceeEEeee--hhhhhhhhh----cCceeEeecC
Q 042170 324 RFTVITKPKTSRSFQNSRDCQKTERTLYVCNHRTLLDPLYLSFALKKNLTAVTYS--LSRMSEILA----PIKTVRMTRN 397 (543)
Q Consensus 324 rv~v~G~~~~~~~~~~~~~~~~~~~~l~VaNH~S~LD~~vl~a~l~~~~~~va~s--l~~v~~~l~----~i~tv~v~R~ 397 (543)
.+++.|.+..... ..+++|+|+++=|...++..........+...+... ...+..++. ..|.-.+. .
T Consensus 95 ~~~~~g~e~l~~a------~~~gkgvI~lt~H~GnWE~~~~~~~~~~~~~~v~r~~~n~~~d~~~~~~R~~~g~~~i~-~ 167 (295)
T PRK05645 95 VREVEGLEVLEQA------LASGKGVVGITSHLGNWEVLNHFYCSQCKPIIFYRPPKLKAVDELLRKQRVQLGNRVAP-S 167 (295)
T ss_pred eeEecCHHHHHHH------HhcCCCEEEEecchhhHHHHHHHHHhcCCCeEEEeCCCCHHHHHHHHHHhCCCCCeEee-c
Confidence 4466776653210 112579999999999999875433322344444322 222333332 22333332 2
Q ss_pred chHHHHHHHHHHhCCC-eEEecCccccCC-Cccccc--ch-----hhhhc----CCceEEEEEEe
Q 042170 398 RDQDAKLVKSLLNQGD-LVICPEGTTCRE-PYLLRF--SP-----LFAEM----SDNIIPVASNS 449 (543)
Q Consensus 398 r~~~~~~~~~~L~~G~-l~iFPEGTtt~g-~~Ll~F--~~-----~fa~l----~~pV~PVaI~~ 449 (543)
+.+...++.+.|++|. |++-+--....+ +...+| ++ +.+.+ ..||+|+.+..
T Consensus 168 ~~~~~r~l~kaLk~g~~v~il~Dq~~~~~~gv~v~FfG~~a~t~~~~~~la~~~~~pvv~~~~~r 232 (295)
T PRK05645 168 TKEGILSVIKEVRKGGQVGIPADPEPAESAGIFVPFLGTQALTSKFVPNMLAGGKAVGVFLHALR 232 (295)
T ss_pred CcccHHHHHHHHhcCCeEEEcCCCCCCCCCCeEeCCCCCchhhhhHHHHHHHhhCCeEEEEEEEE
Confidence 2446788889999997 667655443322 233455 21 12222 24899988854
No 166
>PTZ00174 phosphomannomutase; Provisional
Probab=76.22 E-value=2.3 Score=42.65 Aligned_cols=40 Identities=10% Similarity=-0.092 Sum_probs=28.6
Q ss_pred HHHHHHHHHHhcCC-ceEEEeCCC--CCcchhcccccccCce-eec
Q 042170 208 ILVLQEIIKQENSG-DVIGISSLN--SSLDHYKLFLQQCNEV-YLV 249 (543)
Q Consensus 208 ~~Kv~~l~~~~~~~-~~~aygD~~--S~~D~~~m~L~~~~~~-y~v 249 (543)
-.|..+|+.+.... ..+|+||++ +..|.+ | |+.|+.+ |.|
T Consensus 187 vsKg~al~~L~~~~~eviafGD~~~~~~NDie-M-l~~~~~~g~~v 230 (247)
T PTZ00174 187 WDKTYCLRHLENDFKEIHFFGDKTFEGGNDYE-I-YNDPRTIGHSV 230 (247)
T ss_pred CcHHHHHHHHHhhhhhEEEEcccCCCCCCcHh-h-hhcCCCceEEe
Confidence 46888888886644 678999954 578999 9 6965333 444
No 167
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=74.86 E-value=1.4 Score=41.38 Aligned_cols=14 Identities=29% Similarity=0.529 Sum_probs=12.4
Q ss_pred EEEEEcCCccccCC
Q 042170 65 TLIFNVEGFLLKSS 78 (543)
Q Consensus 65 ~a~FD~DGTLl~~~ 78 (543)
+++||+||||++++
T Consensus 1 iVisDIDGTL~~sd 14 (157)
T smart00775 1 IVISDIDGTITKSD 14 (157)
T ss_pred CEEEecCCCCcccc
Confidence 47899999999886
No 168
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=73.52 E-value=7 Score=46.90 Aligned_cols=102 Identities=12% Similarity=0.176 Sum_probs=68.7
Q ss_pred HhcCHHHHHHHH---hCC-cEEEEeCCcHHHHHHHHHhhCCCc---EEEeceEEEeCe-EEeeeecc----CCC-cHHHH
Q 042170 145 ENVGLEIFEVLK---KGG-KTVAVSNMPQVMIDSFLRDYLDID---LVVGRELKVFCG-YFVGLMED----KKK-NILVL 211 (543)
Q Consensus 145 e~l~~ea~~~~~---~~g-~~v~VSAsp~~~vepfak~~lG~d---~VlgTelev~~G-~~TG~~~g----~~~-g~~Kv 211 (543)
+-++|++-+.++ +.| +++++|.=-..-++.+|++ +|++ .+-|.|++.-++ -+.-.+.. ..+ -++|.
T Consensus 549 Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~-lGI~~~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K~ 627 (902)
T PRK10517 549 DPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHE-VGLDAGEVLIGSDIETLSDDELANLAERTTLFARLTPMHKE 627 (902)
T ss_pred CcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCccCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHHH
Confidence 347888777666 678 8899998888888999998 9996 445555542111 00000000 012 26788
Q ss_pred HHHHHHhcCCceE-EEeCCCCCcchhcccccccCceeeccC
Q 042170 212 QEIIKQENSGDVI-GISSLNSSLDHYKLFLQQCNEVYLVRS 251 (543)
Q Consensus 212 ~~l~~~~~~~~~~-aygD~~S~~D~~~m~L~~~~~~y~v~p 251 (543)
+-++++-...+.+ .-|| +-.|.| - |+.|+-...+..
T Consensus 628 ~IV~~Lq~~G~vVam~GD--GvNDaP-A-Lk~ADVGIAmg~ 664 (902)
T PRK10517 628 RIVTLLKREGHVVGFMGD--GINDAP-A-LRAADIGISVDG 664 (902)
T ss_pred HHHHHHHHCCCEEEEECC--CcchHH-H-HHhCCEEEEeCC
Confidence 8888775444555 4599 999999 9 899999999873
No 169
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=73.07 E-value=40 Score=33.98 Aligned_cols=73 Identities=15% Similarity=0.032 Sum_probs=40.2
Q ss_pred HHHHHhCC-cEEEEeCCcHHH---HHHHHHhhCCCcEEEeceEEEeCeEEeeeeccCCC-c-HHHHHHHHHHhcCCce-E
Q 042170 152 FEVLKKGG-KTVAVSNMPQVM---IDSFLRDYLDIDLVVGRELKVFCGYFVGLMEDKKK-N-ILVLQEIIKQENSGDV-I 224 (543)
Q Consensus 152 ~~~~~~~g-~~v~VSAsp~~~---vepfak~~lG~d~VlgTelev~~G~~TG~~~g~~~-g-~~Kv~~l~~~~~~~~~-~ 224 (543)
++.+++.| +++++|.=++.+ .+.++++ .|++.. .+|-+.. ...... . .-|-++-++...+... +
T Consensus 129 ~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~-~G~~~~--~~LiLR~------~~d~~~~~~~yKs~~R~~l~~~GYrIv 199 (229)
T TIGR01675 129 YQKIIELGIKIFLLSGRWEELRNATLDNLIN-AGFTGW--KHLILRG------LEDSNKTVVTYKSEVRKSLMEEGYRIW 199 (229)
T ss_pred HHHHHHCCCEEEEEcCCChHHHHHHHHHHHH-cCCCCc--CeeeecC------CCCCCchHhHHHHHHHHHHHhCCceEE
Confidence 34444666 888999777666 6778887 788743 3333211 001111 1 2265555555544433 3
Q ss_pred -EEeCCCCCcch
Q 042170 225 -GISSLNSSLDH 235 (543)
Q Consensus 225 -aygD~~S~~D~ 235 (543)
..|| .-+|.
T Consensus 200 ~~iGD--q~sDl 209 (229)
T TIGR01675 200 GNIGD--QWSDL 209 (229)
T ss_pred EEECC--ChHHh
Confidence 5688 66664
No 170
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=72.53 E-value=19 Score=37.07 Aligned_cols=29 Identities=21% Similarity=0.122 Sum_probs=19.2
Q ss_pred HHHhCC-cEEEEeCCcHHHH---HHHHHhhCCCc
Q 042170 154 VLKKGG-KTVAVSNMPQVMI---DSFLRDYLDID 183 (543)
Q Consensus 154 ~~~~~g-~~v~VSAsp~~~v---epfak~~lG~d 183 (543)
.+++.| ++++||..++... +-+++. +|++
T Consensus 129 ~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk-~Gi~ 161 (266)
T TIGR01533 129 YANSKGVKIFYVSNRSEKEKAATLKNLKR-FGFP 161 (266)
T ss_pred HHHHCCCeEEEEeCCCcchHHHHHHHHHH-cCcC
Confidence 344566 8889998764443 367775 7885
No 171
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=71.94 E-value=4 Score=39.43 Aligned_cols=48 Identities=15% Similarity=0.023 Sum_probs=34.6
Q ss_pred eeccCCCcHHHHHHHHHHh---cCC--ceEEEeCCCCCcchhcccccccCceeeccCCc
Q 042170 200 LMEDKKKNILVLQEIIKQE---NSG--DVIGISSLNSSLDHYKLFLQQCNEVYLVRSTD 253 (543)
Q Consensus 200 ~~~g~~~g~~Kv~~l~~~~---~~~--~~~aygD~~S~~D~~~m~L~~~~~~y~v~p~~ 253 (543)
.+...++ .|..+++.+. +-. ..+++|| |..|.+ | ++.|+++|++..+.
T Consensus 179 ei~~~~v--sK~~ai~~l~~~~~i~~~~~~~~GD--~~ND~~-M-l~~~~~~~am~na~ 231 (254)
T PF08282_consen 179 EITPKGV--SKGSAIKYLLEYLGISPEDIIAFGD--SENDIE-M-LELAGYSVAMGNAT 231 (254)
T ss_dssp EEEETTS--SHHHHHHHHHHHHTTSGGGEEEEES--SGGGHH-H-HHHSSEEEEETTS-
T ss_pred EEeeCCC--CHHHHHHHHhhhcccccceeEEeec--ccccHh-H-HhhcCeEEEEcCCC
Confidence 4555555 3666666554 422 6679999 999999 9 79999999997543
No 172
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=71.44 E-value=3.8 Score=41.49 Aligned_cols=48 Identities=19% Similarity=0.088 Sum_probs=33.7
Q ss_pred HHHHHHHHH---hcC---C--ceEEEeCCCCCcchhcccccccCceeeccCCcccCCcccc
Q 042170 209 LVLQEIIKQ---ENS---G--DVIGISSLNSSLDHYKLFLQQCNEVYLVRSTDKRSWQHLS 261 (543)
Q Consensus 209 ~Kv~~l~~~---~~~---~--~~~aygD~~S~~D~~~m~L~~~~~~y~v~p~~~~~w~~l~ 261 (543)
.|..+++.+ ++- . ..+|+|| |..|.+ | |+.|+.++++.. ..++|+.|+
T Consensus 187 sKg~al~~l~~~lgi~~~~~~~viafGD--s~NDi~-M-l~~ag~gvAM~~-~~~~~~~l~ 242 (271)
T PRK03669 187 GKDQAANWLIATYQQLSGTRPTTLGLGD--GPNDAP-L-LDVMDYAVVVKG-LNREGVHLQ 242 (271)
T ss_pred CHHHHHHHHHHHHHhhcCCCceEEEEcC--CHHHHH-H-HHhCCEEEEecC-CCCCCcccc
Confidence 466666554 343 3 5679999 999999 9 799999999963 222455554
No 173
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=69.94 E-value=3 Score=41.88 Aligned_cols=41 Identities=7% Similarity=0.027 Sum_probs=32.2
Q ss_pred HHHHHHHHHHh---cCC--ceEEEeCCCCCcchhcccccccCceeeccCC
Q 042170 208 ILVLQEIIKQE---NSG--DVIGISSLNSSLDHYKLFLQQCNEVYLVRST 252 (543)
Q Consensus 208 ~~Kv~~l~~~~---~~~--~~~aygD~~S~~D~~~m~L~~~~~~y~v~p~ 252 (543)
..|..+|+.+. +-. ..+++|| +..|.+ | |+.|++++++..+
T Consensus 195 vsKg~al~~l~~~~gi~~~~v~afGD--~~NDi~-M-l~~ag~~vAm~NA 240 (270)
T PRK10513 195 VNKGTGVKSLAEHLGIKPEEVMAIGD--QENDIA-M-IEYAGVGVAMGNA 240 (270)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECC--chhhHH-H-HHhCCceEEecCc
Confidence 35777777665 322 5689999 999999 9 7999999999643
No 174
>COG3176 Putative hemolysin [General function prediction only]
Probab=69.22 E-value=8.9 Score=39.93 Aligned_cols=126 Identities=13% Similarity=0.098 Sum_probs=73.7
Q ss_pred HHHHHHcCeEEEEeccCCCCccccCcccccCCCceEEEecCCCCCcHHHHHHhhc---CceeEEeee-hhhhhhhhhcCc
Q 042170 315 TPTLIFSGLRFTVITKPKTSRSFQNSRDCQKTERTLYVCNHRTLLDPLYLSFALK---KNLTAVTYS-LSRMSEILAPIK 390 (543)
Q Consensus 315 ~~ll~~~Gvrv~v~G~~~~~~~~~~~~~~~~~~~~l~VaNH~S~LD~~vl~a~l~---~~~~~va~s-l~~v~~~l~~i~ 390 (543)
+.+...+|.++...+.+..+ ++.+...||||.-..|-++....+. ..+++.+.. ..+...+++..
T Consensus 58 ~vf~~el~~~l~~~~~~~~~----------d~d~fd~VcnHlgv~Dg~~~~d~~~~~vgtyR~l~~~~A~r~~~~ys~~- 126 (292)
T COG3176 58 RVFSEELDARLDAAALERIP----------DQDRFDIVCNHLGVRDGVIVADLLKQLVGTYRLLANAQALRAGGFYSAL- 126 (292)
T ss_pred hhhhhhcCcccccccccccC----------CCCCeeEeccccceecccchhhhHhhhcCceEEeehHHHHHhCCCcccc-
Confidence 44566788888876666543 4689999999999999999966542 445566542 11222222211
Q ss_pred eeEee----cCchHH----HHHHHHHHhCCC-eEEecCccccC---CC-cccccchhh----hhcCCceEEEEEEecc
Q 042170 391 TVRMT----RNRDQD----AKLVKSLLNQGD-LVICPEGTTCR---EP-YLLRFSPLF----AEMSDNIIPVASNSHV 451 (543)
Q Consensus 391 tv~v~----R~r~~~----~~~~~~~L~~G~-l~iFPEGTtt~---g~-~Ll~F~~~f----a~l~~pV~PVaI~~~~ 451 (543)
-+.|+ ++-++. ...+.+.+++|. +++||-|--.- +. .-++.++.+ ..-+.++.|+.+++..
T Consensus 127 ef~v~~~~~~~~~k~~e~grscv~~~yr~g~tl~lfwaG~~ay~~~g~~~~~~gcaS~~~~~~~~~a~~~p~~~~~r~ 204 (292)
T COG3176 127 EFPVDWLEELRPKKFNELGRSCVHREYREGRTLLLFWAGLVAYLDKGRLDDMPGCASVPGLPRKHGAALAPVHHNGRN 204 (292)
T ss_pred ccceeeecccChHHHHHHHHHHHHHHHhcCCEEEEeccchhHHhhccCcccCccccccccchhhcccccchhheeccc
Confidence 11222 211111 234457788997 89999997532 22 223333222 2234589999998654
No 175
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=68.25 E-value=17 Score=35.14 Aligned_cols=76 Identities=14% Similarity=0.092 Sum_probs=46.4
Q ss_pred EEEEeCCcHHHHHHHHHhhCCCcEEEeceEEEeCeEEeeeeccCCCcHHHHHHHHHH---hcCC--ceEEEeCCCCCcch
Q 042170 161 TVAVSNMPQVMIDSFLRDYLDIDLVVGRELKVFCGYFVGLMEDKKKNILVLQEIIKQ---ENSG--DVIGISSLNSSLDH 235 (543)
Q Consensus 161 ~v~VSAsp~~~vepfak~~lG~d~VlgTelev~~G~~TG~~~g~~~g~~Kv~~l~~~---~~~~--~~~aygD~~S~~D~ 235 (543)
++.++......++.++++ .|+..+. .+++. .+...++ .|..+++.. ++-. ..+++|| |..|.
T Consensus 110 ~~~~~~~~~~~~~~~l~~-~~~~~~~-------~~~~~-ei~~~~~--~K~~~i~~l~~~~~i~~~~~i~iGD--s~ND~ 176 (215)
T TIGR01487 110 VIMREGKDVDEVREIIKE-RGLNLVD-------SGFAI-HIMKKGV--DKGVGVEKLKELLGIKPEEVAAIGD--SENDI 176 (215)
T ss_pred EEecCCccHHHHHHHHHh-CCeEEEe-------cCceE-EEecCCC--ChHHHHHHHHHHhCCCHHHEEEECC--CHHHH
Confidence 344566565667777765 6654321 22221 2222233 355555554 3423 5679999 99999
Q ss_pred hcccccccCceeeccC
Q 042170 236 YKLFLQQCNEVYLVRS 251 (543)
Q Consensus 236 ~~m~L~~~~~~y~v~p 251 (543)
+ | ++.++..+++..
T Consensus 177 ~-m-l~~ag~~vam~n 190 (215)
T TIGR01487 177 D-L-FRVVGFKVAVAN 190 (215)
T ss_pred H-H-HHhCCCeEEcCC
Confidence 9 9 699999999954
No 176
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=68.11 E-value=6.4 Score=38.29 Aligned_cols=36 Identities=14% Similarity=0.197 Sum_probs=27.1
Q ss_pred HHHHHHHhcCC--ceEEEeCCCCCcchhcccccccCceeecc
Q 042170 211 LQEIIKQENSG--DVIGISSLNSSLDHYKLFLQQCNEVYLVR 250 (543)
Q Consensus 211 v~~l~~~~~~~--~~~aygD~~S~~D~~~m~L~~~~~~y~v~ 250 (543)
++.+.+.++-. ..+++|| |..|.+ | ++.|+.+++|.
T Consensus 184 l~~l~~~lgi~~~~vi~~GD--~~NDi~-m-l~~ag~~va~~ 221 (221)
T TIGR02463 184 ANWLKATYNQPDVKTLGLGD--GPNDLP-L-LEVADYAVVIK 221 (221)
T ss_pred HHHHHHHhCCCCCcEEEECC--CHHHHH-H-HHhCCceEEeC
Confidence 34444444432 6789999 999999 9 79999999874
No 177
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=68.05 E-value=3.1 Score=37.91 Aligned_cols=14 Identities=7% Similarity=0.406 Sum_probs=12.3
Q ss_pred eEEEEEcCCccccC
Q 042170 64 RTLIFNVEGFLLKS 77 (543)
Q Consensus 64 ~~a~FD~DGTLl~~ 77 (543)
++++||+||||+..
T Consensus 2 K~i~~DiDGTL~~~ 15 (126)
T TIGR01689 2 KRLVMDLDNTITLT 15 (126)
T ss_pred CEEEEeCCCCcccC
Confidence 58999999999865
No 178
>PRK10976 putative hydrolase; Provisional
Probab=67.61 E-value=3.6 Score=41.23 Aligned_cols=42 Identities=10% Similarity=0.090 Sum_probs=32.4
Q ss_pred HHHHHHHHHHh---cCC--ceEEEeCCCCCcchhcccccccCceeeccCCc
Q 042170 208 ILVLQEIIKQE---NSG--DVIGISSLNSSLDHYKLFLQQCNEVYLVRSTD 253 (543)
Q Consensus 208 ~~Kv~~l~~~~---~~~--~~~aygD~~S~~D~~~m~L~~~~~~y~v~p~~ 253 (543)
..|..+|+.+. +-. ..+++|| +..|.+ | ++.|+++|++..+.
T Consensus 189 vsKg~al~~l~~~lgi~~~~viafGD--~~NDi~-M-l~~ag~~vAm~NA~ 235 (266)
T PRK10976 189 VSKGHALEAVAKKLGYSLKDCIAFGD--GMNDAE-M-LSMAGKGCIMGNAH 235 (266)
T ss_pred CChHHHHHHHHHHcCCCHHHeEEEcC--CcccHH-H-HHHcCCCeeecCCc
Confidence 35777777664 322 5679999 999999 9 69999999996543
No 179
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=67.39 E-value=31 Score=41.42 Aligned_cols=96 Identities=16% Similarity=0.142 Sum_probs=64.2
Q ss_pred hcCHHHHHHHH---hCC-cEEEEeCCcHHHHHHHHHhhCCCcE-----EEeceEEEeCe----------EEeeeeccCCC
Q 042170 146 NVGLEIFEVLK---KGG-KTVAVSNMPQVMIDSFLRDYLDIDL-----VVGRELKVFCG----------YFVGLMEDKKK 206 (543)
Q Consensus 146 ~l~~ea~~~~~---~~g-~~v~VSAsp~~~vepfak~~lG~d~-----VlgTelev~~G----------~~TG~~~g~~~ 206 (543)
.+++++-+.++ ++| +++++|.-...-++.++++ +|++. +-|.+++..++ .+-+++.
T Consensus 528 p~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~-~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~---- 602 (884)
T TIGR01522 528 PPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARR-LGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARAS---- 602 (884)
T ss_pred cchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECC----
Confidence 36777777665 678 8899999999999999997 89862 33333332110 1111111
Q ss_pred cHHHHHHHHHHhcCCceE-EEeCCCCCcchhcccccccCceeecc
Q 042170 207 NILVLQEIIKQENSGDVI-GISSLNSSLDHYKLFLQQCNEVYLVR 250 (543)
Q Consensus 207 g~~Kv~~l~~~~~~~~~~-aygD~~S~~D~~~m~L~~~~~~y~v~ 250 (543)
-+.|.+-++.+-...+.+ ..|| +..|.| + |..|+-...+.
T Consensus 603 P~~K~~iv~~lq~~g~~v~mvGD--GvND~p-A-l~~AdVGia~g 643 (884)
T TIGR01522 603 PEHKMKIVKALQKRGDVVAMTGD--GVNDAP-A-LKLADIGVAMG 643 (884)
T ss_pred HHHHHHHHHHHHHCCCEEEEECC--CcccHH-H-HHhCCeeEecC
Confidence 257877777664433444 5799 999999 9 89999887774
No 180
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=66.16 E-value=9.8 Score=42.24 Aligned_cols=81 Identities=11% Similarity=0.123 Sum_probs=60.9
Q ss_pred HhcCHHHHHHHH---hCC-cEEEEeCCcHHHHHHHHHhhCCCcEEEeceEEEeCeEEeeeeccCCC-cHHHHHHHHHHhc
Q 042170 145 ENVGLEIFEVLK---KGG-KTVAVSNMPQVMIDSFLRDYLDIDLVVGRELKVFCGYFVGLMEDKKK-NILVLQEIIKQEN 219 (543)
Q Consensus 145 e~l~~ea~~~~~---~~g-~~v~VSAsp~~~vepfak~~lG~d~VlgTelev~~G~~TG~~~g~~~-g~~Kv~~l~~~~~ 219 (543)
+.+++++.+.++ +.| +++++|.=....++..+++ +|+ | .++ .++|.+-++++..
T Consensus 346 d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~-lgi--------------~------~~~~p~~K~~~v~~l~~ 404 (499)
T TIGR01494 346 DPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKE-LGI--------------F------ARVTPEEKAALVEALQK 404 (499)
T ss_pred CCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cCc--------------e------eccCHHHHHHHHHHHHH
Confidence 347777776555 567 8889999999999999987 886 1 224 4789888887754
Q ss_pred CC-ceEEEeCCCCCcchhcccccccCceeecc
Q 042170 220 SG-DVIGISSLNSSLDHYKLFLQQCNEVYLVR 250 (543)
Q Consensus 220 ~~-~~~aygD~~S~~D~~~m~L~~~~~~y~v~ 250 (543)
.. .....|| ...|.| + |+.++-...+.
T Consensus 405 ~g~~v~~vGD--g~nD~~-a-l~~Advgia~~ 432 (499)
T TIGR01494 405 KGRVVAMTGD--GVNDAP-A-LKKADVGIAMG 432 (499)
T ss_pred CCCEEEEECC--ChhhHH-H-HHhCCCccccc
Confidence 33 3457799 999999 9 79998777775
No 181
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=65.32 E-value=5.2 Score=38.58 Aligned_cols=23 Identities=30% Similarity=0.430 Sum_probs=16.5
Q ss_pred cEEEEeCCcHHHHHHHHHhhCCCc
Q 042170 160 KTVAVSNMPQVMIDSFLRDYLDID 183 (543)
Q Consensus 160 ~~v~VSAsp~~~vepfak~~lG~d 183 (543)
+.++.|+=+...+.+++++ ++++
T Consensus 33 ~~~i~TGR~~~~~~~~~~~-~~~~ 55 (254)
T PF08282_consen 33 KLVIATGRSYSSIKRLLKE-LGID 55 (254)
T ss_dssp EEEEECSSTHHHHHHHHHH-TTHC
T ss_pred EEEEEccCccccccccccc-ccch
Confidence 6667776666677777776 7776
No 182
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=64.43 E-value=23 Score=42.72 Aligned_cols=97 Identities=11% Similarity=0.101 Sum_probs=60.6
Q ss_pred cCHHHHHHHH---hCC-cEEEEeCCcHHHHHHHHHhhCCCcEEEeceEEEeCeEEeeee-----------------ccCC
Q 042170 147 VGLEIFEVLK---KGG-KTVAVSNMPQVMIDSFLRDYLDIDLVVGRELKVFCGYFVGLM-----------------EDKK 205 (543)
Q Consensus 147 l~~ea~~~~~---~~g-~~v~VSAsp~~~vepfak~~lG~d~VlgTelev~~G~~TG~~-----------------~g~~ 205 (543)
+++++-+.++ ++| +++++|.-....++.++++ +|+.. .+-++.+-.+||.- ....
T Consensus 538 lr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~-~gi~~---~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar 613 (917)
T TIGR01116 538 PRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRR-IGIFS---PDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSR 613 (917)
T ss_pred CchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHH-cCCCC---CCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEe
Confidence 5666665444 788 9899998888888999997 89842 11011111233311 0011
Q ss_pred C-cHHHHHHHHHHhcCCceE-EEeCCCCCcchhcccccccCceeeccC
Q 042170 206 K-NILVLQEIIKQENSGDVI-GISSLNSSLDHYKLFLQQCNEVYLVRS 251 (543)
Q Consensus 206 ~-g~~Kv~~l~~~~~~~~~~-aygD~~S~~D~~~m~L~~~~~~y~v~p 251 (543)
+ -+.|.+-++.+-...+.+ ..|| +..|.| | |+.|+-...+..
T Consensus 614 ~~P~~K~~iV~~lq~~g~~va~iGD--G~ND~~-a-lk~AdVGia~g~ 657 (917)
T TIGR01116 614 VEPSHKSELVELLQEQGEIVAMTGD--GVNDAP-A-LKKADIGIAMGS 657 (917)
T ss_pred cCHHHHHHHHHHHHhcCCeEEEecC--CcchHH-H-HHhCCeeEECCC
Confidence 1 246766666443222445 4799 999999 9 799999998853
No 183
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=64.17 E-value=26 Score=33.84 Aligned_cols=76 Identities=12% Similarity=0.003 Sum_probs=44.7
Q ss_pred EEeCCcHHHHHHHHHhhCCCcEEEeceEEE-eCeEEeeeeccCCCcHHHHHHHHHH---hcCC--ceEEEeCCCCCcchh
Q 042170 163 AVSNMPQVMIDSFLRDYLDIDLVVGRELKV-FCGYFVGLMEDKKKNILVLQEIIKQ---ENSG--DVIGISSLNSSLDHY 236 (543)
Q Consensus 163 ~VSAsp~~~vepfak~~lG~d~VlgTelev-~~G~~TG~~~g~~~g~~Kv~~l~~~---~~~~--~~~aygD~~S~~D~~ 236 (543)
+.+......++.++++ ++.+. .+ ..+ +.-.+..+++ .|...++.+ ++-. ..+++|| +..|.+
T Consensus 112 ~~~~~~~~~~~~~~~~-~~~~~------~~~~~~-~~~ei~~~~~--~K~~~i~~l~~~~~i~~~~~i~~GD--~~NDi~ 179 (225)
T TIGR01482 112 MRYGIDVDTVREIIKE-LGLNL------VAVDSG-FDIHILPQGV--NKGVAVKKLKEKLGIKPGETLVCGD--SENDID 179 (225)
T ss_pred EeecCCHHHHHHHHHh-cCceE------EEecCC-cEEEEeeCCC--CHHHHHHHHHHHhCCCHHHEEEECC--CHhhHH
Confidence 3343344455656664 66531 11 122 2233443444 355555554 3322 5679999 999999
Q ss_pred cccccccCceeeccCC
Q 042170 237 KLFLQQCNEVYLVRST 252 (543)
Q Consensus 237 ~m~L~~~~~~y~v~p~ 252 (543)
| ++.|+..+++..+
T Consensus 180 -m-~~~ag~~vam~Na 193 (225)
T TIGR01482 180 -L-FEVPGFGVAVANA 193 (225)
T ss_pred -H-HHhcCceEEcCCh
Confidence 9 6999999999643
No 184
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=62.80 E-value=6.7 Score=37.61 Aligned_cols=43 Identities=23% Similarity=0.296 Sum_probs=23.6
Q ss_pred hhhHHHh-cCHHHHHHHH---hCC-cEEEEeCCcHH-------HHHHHHHhhCCC
Q 042170 140 PKFFLEN-VGLEIFEVLK---KGG-KTVAVSNMPQV-------MIDSFLRDYLDI 182 (543)
Q Consensus 140 pk~~~e~-l~~ea~~~~~---~~g-~~v~VSAsp~~-------~vepfak~~lG~ 182 (543)
|.||.+. .-|.|.|+++ +.| +.++|||.|.. --.-|+++++|.
T Consensus 66 ~~~f~~l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~ 120 (191)
T PF06941_consen 66 PGFFSNLPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPF 120 (191)
T ss_dssp TTTTTT--B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTH
T ss_pred hhhhcCCCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCC
Confidence 3454443 4455566555 667 78888766543 223478887663
No 185
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=62.76 E-value=14 Score=44.39 Aligned_cols=101 Identities=12% Similarity=0.182 Sum_probs=67.9
Q ss_pred hcCHHHHHHHH---hCC-cEEEEeCCcHHHHHHHHHhhCCCc---EEEeceEEEe-CeEEeeeecc----CCC-cHHHHH
Q 042170 146 NVGLEIFEVLK---KGG-KTVAVSNMPQVMIDSFLRDYLDID---LVVGRELKVF-CGYFVGLMED----KKK-NILVLQ 212 (543)
Q Consensus 146 ~l~~ea~~~~~---~~g-~~v~VSAsp~~~vepfak~~lG~d---~VlgTelev~-~G~~TG~~~g----~~~-g~~Kv~ 212 (543)
-+++++-+.++ +.| +++++|.=-..-++..+++ +|++ .+-|.|++.- +.-+.-.+.. ..+ -++|.+
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~-lGI~~~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K~~ 628 (903)
T PRK15122 550 PPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICRE-VGLEPGEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKSR 628 (903)
T ss_pred ccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCCCCccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHHHH
Confidence 37788777666 678 8899998888889999998 9996 3445555421 1101111110 011 167888
Q ss_pred HHHHHhcCCceEE-EeCCCCCcchhcccccccCceeeccC
Q 042170 213 EIIKQENSGDVIG-ISSLNSSLDHYKLFLQQCNEVYLVRS 251 (543)
Q Consensus 213 ~l~~~~~~~~~~a-ygD~~S~~D~~~m~L~~~~~~y~v~p 251 (543)
-++++-...+.+| -|| +-.|.| . |+.|+=...+..
T Consensus 629 iV~~Lq~~G~vVamtGD--GvNDaP-A-Lk~ADVGIAmg~ 664 (903)
T PRK15122 629 VLKALQANGHTVGFLGD--GINDAP-A-LRDADVGISVDS 664 (903)
T ss_pred HHHHHHhCCCEEEEECC--CchhHH-H-HHhCCEEEEeCc
Confidence 8887754435554 699 999999 9 899999998863
No 186
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=62.03 E-value=34 Score=33.17 Aligned_cols=20 Identities=5% Similarity=0.356 Sum_probs=16.3
Q ss_pred eEEEEEcCCccccCCCchHH
Q 042170 64 RTLIFNVEGFLLKSSSLFPY 83 (543)
Q Consensus 64 ~~a~FD~DGTLl~~~s~fp~ 83 (543)
++.+||+||||+.++...+.
T Consensus 4 kli~~DlDGTLl~~~~~i~~ 23 (230)
T PRK01158 4 KAIAIDIDGTITDKDRRLSL 23 (230)
T ss_pred eEEEEecCCCcCCCCCccCH
Confidence 68999999999988765543
No 187
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=61.59 E-value=7.6 Score=44.93 Aligned_cols=86 Identities=16% Similarity=0.215 Sum_probs=50.8
Q ss_pred cEEEEeCCcHHHHHHHHHhhCCCcEEEeceEEEeCeEEeeeeccCCCcHHHHHHHH---HHhcCC--ceEE--EeCCCCC
Q 042170 160 KTVAVSNMPQVMIDSFLRDYLDIDLVVGRELKVFCGYFVGLMEDKKKNILVLQEII---KQENSG--DVIG--ISSLNSS 232 (543)
Q Consensus 160 ~~v~VSAsp~~~vepfak~~lG~d~VlgTelev~~G~~TG~~~g~~~g~~Kv~~l~---~~~~~~--~~~a--ygD~~S~ 232 (543)
..+++...++. ++.+.++ +.- . +-++.. +|+|-=.+ +++ .|-.+++ +.++.. ..++ .|| |.
T Consensus 574 eKIl~~gd~e~-Leel~~~-L~~-~--~l~v~~-g~rfleI~--~gv--dKG~AL~~L~e~~gI~~~eViafalGD--s~ 641 (694)
T PRK14502 574 ETVHIEGDKRS-TNIVLNH-IQQ-S--GLEYSF-GGRFYEVT--GGN--DKGKAIKILNELFRLNFGNIHTFGLGD--SE 641 (694)
T ss_pred eeEEEcCCHHH-HHHHHHH-HHH-c--CcEEEE-CCEEEEeC--CCC--CHHHHHHHHHHHhCCCccceEEEEcCC--cH
Confidence 56777776655 4555554 321 1 212222 55554444 244 2554444 445432 3344 499 99
Q ss_pred cchhcccccccCceeeccCCcccCCccc
Q 042170 233 LDHYKLFLQQCNEVYLVRSTDKRSWQHL 260 (543)
Q Consensus 233 ~D~~~m~L~~~~~~y~v~p~~~~~w~~l 260 (543)
.|.+ | |+.|+.++++. .....|+.+
T Consensus 642 NDis-M-Le~Ag~gVAM~-~~~~~~~~l 666 (694)
T PRK14502 642 NDYS-M-LETVDSPILVQ-RPGNKWHKM 666 (694)
T ss_pred hhHH-H-HHhCCceEEEc-CCCCCCCcc
Confidence 9999 9 79999999995 345578777
No 188
>KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]
Probab=61.55 E-value=0.94 Score=47.33 Aligned_cols=109 Identities=14% Similarity=0.088 Sum_probs=68.7
Q ss_pred eEEecCccccCCCcccccchhhhhcCCceEEEEEEeccccccccccCCcccccchhccc---CCCCeEEEEEcccccCCc
Q 042170 414 LVICPEGTTCREPYLLRFSPLFAEMSDNIIPVASNSHVTMFYGTTAGGLKCLDPFFFLM---NPSPGYTMQLLEGVSGLS 490 (543)
Q Consensus 414 l~iFPEGTtt~g~~Ll~F~~~fa~l~~pV~PVaI~~~~~~~~gt~~~~~~~~d~~~~l~---~P~~~v~V~fL~pi~~~~ 490 (543)
..+|||||++++....-|+.+..-..-++.|+.|.|...+|. ..+.|..+-.-+..+. +--...+|..+=|--
T Consensus 265 f~LFde~~tg~~D~re~v~~lavlc~p~~t~~iiq~afk~f~-v~eDg~~ge~~ls~ilq~~lgv~~l~v~~lf~~i--- 340 (412)
T KOG4666|consen 265 FMLFDEGTTGNGDYRETVKTLAVLCGPPVTPVIIQYAFKRFS-VAEDGISGEHILSLILQVVLGVEVLRVPVLFPSI--- 340 (412)
T ss_pred hheecCCCCCcccHHHHhhhheeeeCCCCcHHHHHHHHHhcc-cccccccchHHHHHHHHHhcCcceeeccccchhh---
Confidence 679999999999999999988776667999999999887773 3334444333333222 222334444442211
Q ss_pred ccCCCCCCHHHHHHHHHHHHHHHhCCCccCCChhhHHHh
Q 042170 491 MCQDGNESRFDVANYVQSELGKALGFECTKLTRRDKYQI 529 (543)
Q Consensus 491 ~~~~~~~~~~elA~~vq~~Ia~~Lg~~~T~~T~~Dk~~~ 529 (543)
+++++.+--+...++-.+..=.+.-..+++-||-..
T Consensus 341 ---~q~d~~ki~~~~f~~fa~~~p~~a~~~~~yld~~~~ 376 (412)
T KOG4666|consen 341 ---EQKDDPKIYASNFRKFAATEPNLALSELGYLDKRIY 376 (412)
T ss_pred ---hcccCcceeHHHHHHHHHhCchhhhhhhccccchhe
Confidence 134566667777787777765555444444455443
No 189
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=61.20 E-value=9.1 Score=38.32 Aligned_cols=39 Identities=21% Similarity=0.251 Sum_probs=29.9
Q ss_pred HHHHHHHHhc-C--C-ceEEEeCCCCCcchhcccccccCceeeccCC
Q 042170 210 VLQEIIKQEN-S--G-DVIGISSLNSSLDHYKLFLQQCNEVYLVRST 252 (543)
Q Consensus 210 Kv~~l~~~~~-~--~-~~~aygD~~S~~D~~~m~L~~~~~~y~v~p~ 252 (543)
.++.+.+.++ . . ..+++|| |..|.+ | ++.|++++++..+
T Consensus 180 ai~~l~~~~~i~~~~~~~~a~GD--~~ND~~-M-l~~ag~~vam~Na 222 (256)
T TIGR01486 180 AANALKQFYNQPGGAIKVVGLGD--SPNDLP-L-LEVVDLAVVVPGP 222 (256)
T ss_pred HHHHHHHHHhhcCCCceEEEEcC--CHhhHH-H-HHHCCEEEEeCCC
Confidence 3455555554 2 2 5789999 999999 9 6999999999654
No 190
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=61.02 E-value=4.6 Score=40.76 Aligned_cols=40 Identities=8% Similarity=0.091 Sum_probs=31.7
Q ss_pred HHHHHHHHHh---cCC--ceEEEeCCCCCcchhcccccccCceeeccCC
Q 042170 209 LVLQEIIKQE---NSG--DVIGISSLNSSLDHYKLFLQQCNEVYLVRST 252 (543)
Q Consensus 209 ~Kv~~l~~~~---~~~--~~~aygD~~S~~D~~~m~L~~~~~~y~v~p~ 252 (543)
.|..+|+.+. +-. ..+++|| +..|.+ | |+.|++++++..+
T Consensus 188 sKg~al~~l~~~~gi~~~~v~afGD--~~NDi~-M-l~~ag~~vAm~Na 232 (272)
T PRK15126 188 NKGAALAVLSQHLGLSLADCMAFGD--AMNDRE-M-LGSVGRGFIMGNA 232 (272)
T ss_pred ChHHHHHHHHHHhCCCHHHeEEecC--CHHHHH-H-HHHcCCceeccCC
Confidence 5777777665 322 5679999 999999 9 6999999999653
No 191
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=60.40 E-value=6.4 Score=37.70 Aligned_cols=37 Identities=11% Similarity=0.062 Sum_probs=27.0
Q ss_pred HHHHHHHHHh---cCC--ceEEEeCCCCCcchhcccccccCceeec
Q 042170 209 LVLQEIIKQE---NSG--DVIGISSLNSSLDHYKLFLQQCNEVYLV 249 (543)
Q Consensus 209 ~Kv~~l~~~~---~~~--~~~aygD~~S~~D~~~m~L~~~~~~y~v 249 (543)
.|..+++.+. +.. ..+++|| +..|.+ | ++.|+.++++
T Consensus 163 ~K~~~~~~~~~~~~~~~~~~~~~GD--~~nD~~-~-~~~~~~~vam 204 (204)
T TIGR01484 163 DKGSALQALLKELNGKRDEILAFGD--SGNDEE-M-FEVAGLAVAV 204 (204)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcC--CHHHHH-H-HHHcCCceEC
Confidence 3555555544 322 5789999 999999 9 6999998864
No 192
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=60.32 E-value=4.8 Score=38.11 Aligned_cols=21 Identities=19% Similarity=0.398 Sum_probs=16.7
Q ss_pred CeEEEEEcCCccccCCCchHH
Q 042170 63 ERTLIFNVEGFLLKSSSLFPY 83 (543)
Q Consensus 63 ~~~a~FD~DGTLl~~~s~fp~ 83 (543)
.++++||.||||+...+-.+|
T Consensus 13 ~k~~~~D~Dgtl~~~~~~~~~ 33 (166)
T TIGR01664 13 SKVAAFDLDGTLITTRSGKVF 33 (166)
T ss_pred CcEEEEeCCCceEecCCCCcc
Confidence 478999999999987664443
No 193
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=58.72 E-value=18 Score=42.93 Aligned_cols=87 Identities=17% Similarity=0.126 Sum_probs=64.5
Q ss_pred HHhcCHHHHHHHH---hCC-cEEEEeCCcHHHHHHHHHhhCCCcEEEeceEEEeCeEEeeeeccCCCcHHHHHHHHHHhc
Q 042170 144 LENVGLEIFEVLK---KGG-KTVAVSNMPQVMIDSFLRDYLDIDLVVGRELKVFCGYFVGLMEDKKKNILVLQEIIKQEN 219 (543)
Q Consensus 144 ~e~l~~ea~~~~~---~~g-~~v~VSAsp~~~vepfak~~lG~d~VlgTelev~~G~~TG~~~g~~~g~~Kv~~l~~~~~ 219 (543)
.+.++|++.+.+. +.| +++++|.=-+--+...+++ +|+|.|.+--+ -++|++-+++.-.
T Consensus 721 ~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~-VGi~~V~aev~----------------P~~K~~~Ik~lq~ 783 (951)
T KOG0207|consen 721 EDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQ-VGIDNVYAEVL----------------PEQKAEKIKEIQK 783 (951)
T ss_pred ccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHh-hCcceEEeccC----------------chhhHHHHHHHHh
Confidence 4458888887665 778 8999998888888888887 89886654221 1467777777765
Q ss_pred CC-ceEEEeCCCCCcchhcccccccCceeeccC
Q 042170 220 SG-DVIGISSLNSSLDHYKLFLQQCNEVYLVRS 251 (543)
Q Consensus 220 ~~-~~~aygD~~S~~D~~~m~L~~~~~~y~v~p 251 (543)
+. .....|| ...|-| = |..++-...+.-
T Consensus 784 ~~~~VaMVGD--GINDaP-A-LA~AdVGIaig~ 812 (951)
T KOG0207|consen 784 NGGPVAMVGD--GINDAP-A-LAQADVGIAIGA 812 (951)
T ss_pred cCCcEEEEeC--CCCccH-H-HHhhccceeecc
Confidence 54 4456799 999999 7 788888877764
No 194
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=58.20 E-value=15 Score=43.27 Aligned_cols=100 Identities=12% Similarity=0.037 Sum_probs=66.1
Q ss_pred HhcCHHHHHHHH---hCC-cEEEEeCCcHHHHHHHHHhhCCCcE-EE-eceEEEeCeEEeeee---------c----cCC
Q 042170 145 ENVGLEIFEVLK---KGG-KTVAVSNMPQVMIDSFLRDYLDIDL-VV-GRELKVFCGYFVGLM---------E----DKK 205 (543)
Q Consensus 145 e~l~~ea~~~~~---~~g-~~v~VSAsp~~~vepfak~~lG~d~-Vl-gTelev~~G~~TG~~---------~----g~~ 205 (543)
+-++|++-+.++ +.| +++++|.=-..-++.++++ +|++. ++ |.++. .|.-...+ . -..
T Consensus 441 Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~-lGI~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~vfAr 517 (755)
T TIGR01647 441 DPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARR-LGLGTNIYTADVLL--KGDNRDDLPSGELGEMVEDADGFAE 517 (755)
T ss_pred CCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCCCCcCHHHhc--CCcchhhCCHHHHHHHHHhCCEEEe
Confidence 347777777666 678 8899998888899999998 99964 21 22221 11000000 0 011
Q ss_pred C-cHHHHHHHHHHhcCCceE-EEeCCCCCcchhcccccccCceeeccC
Q 042170 206 K-NILVLQEIIKQENSGDVI-GISSLNSSLDHYKLFLQQCNEVYLVRS 251 (543)
Q Consensus 206 ~-g~~Kv~~l~~~~~~~~~~-aygD~~S~~D~~~m~L~~~~~~y~v~p 251 (543)
+ -++|.+-++++-...+.+ .-|| +..|.| - |+.|+-...+..
T Consensus 518 ~~Pe~K~~iV~~lq~~G~~VamvGD--GvNDap-A-L~~AdVGIAm~~ 561 (755)
T TIGR01647 518 VFPEHKYEIVEILQKRGHLVGMTGD--GVNDAP-A-LKKADVGIAVAG 561 (755)
T ss_pred cCHHHHHHHHHHHHhcCCEEEEEcC--CcccHH-H-HHhCCeeEEecC
Confidence 2 268888888775443555 4599 999999 8 799999998863
No 195
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=57.14 E-value=6.2 Score=41.17 Aligned_cols=32 Identities=25% Similarity=0.203 Sum_probs=25.6
Q ss_pred HHHHHhCC-cEEEEeCCcHHHHHHHHHhhCCCcE
Q 042170 152 FEVLKKGG-KTVAVSNMPQVMIDSFLRDYLDIDL 184 (543)
Q Consensus 152 ~~~~~~~g-~~v~VSAsp~~~vepfak~~lG~d~ 184 (543)
++.+++.| +.+++|++++..++..+++ +|++.
T Consensus 155 L~~LkekGikLaIaTS~~Re~v~~~L~~-lGLd~ 187 (301)
T TIGR01684 155 LTELKKRGCILVLWSYGDRDHVVESMRK-VKLDR 187 (301)
T ss_pred HHHHHHCCCEEEEEECCCHHHHHHHHHH-cCCCc
Confidence 34456667 7788999999999999986 89883
No 196
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=57.11 E-value=5.6 Score=43.39 Aligned_cols=17 Identities=18% Similarity=0.516 Sum_probs=15.0
Q ss_pred CeEEEEEcCCccccCCC
Q 042170 63 ERTLIFNVEGFLLKSSS 79 (543)
Q Consensus 63 ~~~a~FD~DGTLl~~~s 79 (543)
.+++++|.|||||++|-
T Consensus 375 ~kiVVsDiDGTITkSD~ 391 (580)
T COG5083 375 KKIVVSDIDGTITKSDA 391 (580)
T ss_pred CcEEEEecCCcEEehhh
Confidence 67999999999999853
No 197
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=56.02 E-value=6.7 Score=38.89 Aligned_cols=24 Identities=21% Similarity=0.459 Sum_probs=21.9
Q ss_pred ceEEEeCCCCCcchhcccccccCceeec
Q 042170 222 DVIGISSLNSSLDHYKLFLQQCNEVYLV 249 (543)
Q Consensus 222 ~~~aygD~~S~~D~~~m~L~~~~~~y~v 249 (543)
..+++|| |..|.+ | ++.|+.+++|
T Consensus 201 ~~i~~GD--~~nD~~-m-l~~ag~~v~v 224 (225)
T TIGR02461 201 ESVGLGD--SENDFP-M-FEVVDLAFLV 224 (225)
T ss_pred cEEEEcC--CHHHHH-H-HHhCCCcEec
Confidence 5689999 999999 9 7999999987
No 198
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=55.48 E-value=7 Score=37.11 Aligned_cols=18 Identities=17% Similarity=0.281 Sum_probs=14.8
Q ss_pred eEEEEEcCCccccCCCch
Q 042170 64 RTLIFNVEGFLLKSSSLF 81 (543)
Q Consensus 64 ~~a~FD~DGTLl~~~s~f 81 (543)
++++||.|||||.....+
T Consensus 2 ~~i~fDktGTLt~~~~~v 19 (215)
T PF00702_consen 2 DAICFDKTGTLTQGKMSV 19 (215)
T ss_dssp SEEEEECCTTTBESHHEE
T ss_pred eEEEEecCCCcccCeEEE
Confidence 478999999999885555
No 199
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=55.00 E-value=6.7 Score=35.29 Aligned_cols=29 Identities=21% Similarity=0.234 Sum_probs=21.0
Q ss_pred HHHHHhCC-cEEEEeCC-cHHHHHHHHHhhCC
Q 042170 152 FEVLKKGG-KTVAVSNM-PQVMIDSFLRDYLD 181 (543)
Q Consensus 152 ~~~~~~~g-~~v~VSAs-p~~~vepfak~~lG 181 (543)
++.+++.| +++++|+. +..++...++. +|
T Consensus 38 L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~-~~ 68 (128)
T TIGR01681 38 LQTLKKNGFLLALASYNDDPHVAYELLKI-FE 68 (128)
T ss_pred HHHHHHCCeEEEEEeCCCCHHHHHHHHHh-cc
Confidence 44555678 77889988 88888777775 55
No 200
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=54.51 E-value=7.5 Score=35.62 Aligned_cols=85 Identities=16% Similarity=0.162 Sum_probs=43.7
Q ss_pred HHHHHHhCC-cEEEEeCCcH---------------HHHHHHHHhhCCCcEEEeceEEEeCeEEeeeeccCCC-cHHHHHH
Q 042170 151 IFEVLKKGG-KTVAVSNMPQ---------------VMIDSFLRDYLDIDLVVGRELKVFCGYFVGLMEDKKK-NILVLQE 213 (543)
Q Consensus 151 a~~~~~~~g-~~v~VSAsp~---------------~~vepfak~~lG~d~VlgTelev~~G~~TG~~~g~~~-g~~Kv~~ 213 (543)
.++.+++.| +++++|+.++ ..++..++. +|++.- ..+.....+....+... ..+-...
T Consensus 35 ~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~l~~~----~~~~~~~~~~~~~~~~KP~~~~~~~ 109 (147)
T TIGR01656 35 ALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQ-LGVAVD----GVLFCPHHPADNCSCRKPKPGLILE 109 (147)
T ss_pred HHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHh-CCCcee----EEEECCCCCCCCCCCCCCCHHHHHH
Confidence 355566778 7788998874 456666765 777510 01111111011111111 2344455
Q ss_pred HHHHhcCC--ceEEEeCCCCCcchhcccccccC
Q 042170 214 IIKQENSG--DVIGISSLNSSLDHYKLFLQQCN 244 (543)
Q Consensus 214 l~~~~~~~--~~~aygD~~S~~D~~~m~L~~~~ 244 (543)
+.+.++-. ..+-.|| |..|.. . -..++
T Consensus 110 ~~~~~~~~~~e~i~IGD--s~~Di~-~-A~~~G 138 (147)
T TIGR01656 110 ALKRLGVDASRSLVVGD--RLRDLQ-A-ARNAG 138 (147)
T ss_pred HHHHcCCChHHEEEEcC--CHHHHH-H-HHHCC
Confidence 55555533 5678899 888876 4 33444
No 201
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=54.28 E-value=7.9 Score=40.46 Aligned_cols=29 Identities=17% Similarity=0.293 Sum_probs=20.2
Q ss_pred HHHhCC-cEEEEeCCcHHHHHHHHHhhCCCc
Q 042170 154 VLKKGG-KTVAVSNMPQVMIDSFLRDYLDID 183 (543)
Q Consensus 154 ~~~~~g-~~v~VSAsp~~~vepfak~~lG~d 183 (543)
.+++.| .+|+.|+=+..-++++.++ +|++
T Consensus 29 ~Lk~~GI~vVlaTGRt~~ev~~l~~~-Lgl~ 58 (302)
T PRK12702 29 ALERRSIPLVLYSLRTRAQLEHLCRQ-LRLE 58 (302)
T ss_pred HHHHCCCEEEEEcCCCHHHHHHHHHH-hCCC
Confidence 344556 6677787777777888776 7876
No 202
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=53.90 E-value=6.6 Score=37.56 Aligned_cols=15 Identities=33% Similarity=0.527 Sum_probs=13.4
Q ss_pred CeEEEEEcCCccccC
Q 042170 63 ERTLIFNVEGFLLKS 77 (543)
Q Consensus 63 ~~~a~FD~DGTLl~~ 77 (543)
-++.+||+|||||..
T Consensus 21 ikli~~D~Dgtl~~~ 35 (183)
T PRK09484 21 IRLLICDVDGVFSDG 35 (183)
T ss_pred ceEEEEcCCeeeecC
Confidence 479999999999975
No 203
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=53.54 E-value=7.1 Score=34.69 Aligned_cols=81 Identities=19% Similarity=0.213 Sum_probs=45.7
Q ss_pred HHHHHhCC-cEEEEeCCc--------HHHHHHHHHhhCCCcEEEeceEEEeCeEEeeeeccCCCcHHHHHHHHHHhc-CC
Q 042170 152 FEVLKKGG-KTVAVSNMP--------QVMIDSFLRDYLDIDLVVGRELKVFCGYFVGLMEDKKKNILVLQEIIKQEN-SG 221 (543)
Q Consensus 152 ~~~~~~~g-~~v~VSAsp--------~~~vepfak~~lG~d~VlgTelev~~G~~TG~~~g~~~g~~Kv~~l~~~~~-~~ 221 (543)
++.+++.| +++++|.++ +..++.++++ +|++. ... .+++....++ .+=...+.+.++ -.
T Consensus 34 l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~-~~l~~----~~~----~~~~~~~KP~--~~~~~~~~~~~~~~~ 102 (132)
T TIGR01662 34 LAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEE-LGVPI----DVL----YACPHCRKPK--PGMFLEALKRFNEID 102 (132)
T ss_pred HHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHH-CCCCE----EEE----EECCCCCCCC--hHHHHHHHHHcCCCC
Confidence 34455677 888999998 8888888886 78751 111 1222111222 233444455542 22
Q ss_pred --ceEEEeCCCCCcchhcccccccCce
Q 042170 222 --DVIGISSLNSSLDHYKLFLQQCNEV 246 (543)
Q Consensus 222 --~~~aygD~~S~~D~~~m~L~~~~~~ 246 (543)
..+-+||. +..|.. + ...++-.
T Consensus 103 ~~~~v~IGD~-~~~Di~-~-A~~~Gi~ 126 (132)
T TIGR01662 103 PEESVYVGDQ-DLTDLQ-A-AKRAGLA 126 (132)
T ss_pred hhheEEEcCC-CcccHH-H-HHHCCCe
Confidence 56788992 267876 5 4455533
No 204
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=53.41 E-value=51 Score=33.06 Aligned_cols=48 Identities=10% Similarity=0.176 Sum_probs=29.5
Q ss_pred cCHHHHHHHH---hCC-cEEEEeCCcHHHHHHHHHhhCC-----Cc-EEEeceEEEeCe
Q 042170 147 VGLEIFEVLK---KGG-KTVAVSNMPQVMIDSFLRDYLD-----ID-LVVGRELKVFCG 195 (543)
Q Consensus 147 l~~ea~~~~~---~~g-~~v~VSAsp~~~vepfak~~lG-----~d-~VlgTelev~~G 195 (543)
+-|.+.++++ ..| .+.++|.+++..+|-=.+. ++ ++ .|+|+.-++.+|
T Consensus 93 ~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~-~~~~~~~f~~~v~~d~~~v~~g 150 (222)
T KOG2914|consen 93 LMPGAEKLVNHLKNNGIPVALATSSTSASFELKISR-HEDIFKNFSHVVLGDDPEVKNG 150 (222)
T ss_pred cCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHH-hhHHHHhcCCCeecCCccccCC
Confidence 5566666666 567 7778888877776654432 23 33 344566666555
No 205
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=53.40 E-value=6.9 Score=36.35 Aligned_cols=14 Identities=43% Similarity=0.762 Sum_probs=12.3
Q ss_pred eEEEEEcCCccccC
Q 042170 64 RTLIFNVEGFLLKS 77 (543)
Q Consensus 64 ~~a~FD~DGTLl~~ 77 (543)
++++||.||||+..
T Consensus 2 ~~~~~D~Dgtl~~~ 15 (154)
T TIGR01670 2 RLLILDVDGVLTDG 15 (154)
T ss_pred eEEEEeCceeEEcC
Confidence 57899999999973
No 206
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=52.53 E-value=89 Score=31.89 Aligned_cols=111 Identities=17% Similarity=0.136 Sum_probs=65.2
Q ss_pred cCcccchhH-HHHhhchhhHHHhcCHHHHHHHHhCC-cEEEEeCCcHHHHHHHHHhhCCC--c--EEEeceEEEe-CeEE
Q 042170 125 FWVKKDNFR-VGRAVLPKFFLENVGLEIFEVLKKGG-KTVAVSNMPQVMIDSFLRDYLDI--D--LVVGRELKVF-CGYF 197 (543)
Q Consensus 125 ~G~~~~~~~-va~avlpk~~~e~l~~ea~~~~~~~g-~~v~VSAsp~~~vepfak~~lG~--d--~VlgTelev~-~G~~ 197 (543)
.|+++++++ +.++- ..-+++=..+.++.+.+.+ -+.+.||-.-..+|-.+++. |. + +|++..|... +|..
T Consensus 73 ~~l~k~~i~~~V~~s--~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~-~~~~~Nv~VvSN~M~Fd~~g~l 149 (246)
T PF05822_consen 73 QGLTKSEIEEAVKES--DIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQA-GVFHPNVKVVSNFMDFDEDGVL 149 (246)
T ss_dssp HT-BGGGHHHHHHCS-----B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHT-T--BTTEEEEEE-EEE-TTSBE
T ss_pred cCcCHHHHHHHHHhc--chhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHc-CCCCCCeEEEeeeEEECCcceE
Confidence 388888887 54432 2223333455566677778 77788999999999999874 53 2 8999999994 7998
Q ss_pred eeeeccCCCc-HHHHHHHH------HHhcCC-ceEEEeCCCCCcchhccccccc
Q 042170 198 VGLMEDKKKN-ILVLQEII------KQENSG-DVIGISSLNSSLDHYKLFLQQC 243 (543)
Q Consensus 198 TG~~~g~~~g-~~Kv~~l~------~~~~~~-~~~aygD~~S~~D~~~m~L~~~ 243 (543)
+|.=. +-.. -.|-+... +....+ +.+=.|| |.+|.. | -.=+
T Consensus 150 ~gF~~-~lIH~~NKn~~~l~~~~~~~~~~~R~NvlLlGD--slgD~~-M-a~G~ 198 (246)
T PF05822_consen 150 VGFKG-PLIHTFNKNESALEDSPYFKQLKKRTNVLLLGD--SLGDLH-M-ADGV 198 (246)
T ss_dssp EEE-S-S---TT-HHHHHHTTHHHHHCTTT--EEEEEES--SSGGGG-T-TTT-
T ss_pred eecCC-CceEEeeCCcccccCchHHHHhccCCcEEEecC--ccCChH-h-hcCC
Confidence 88532 2111 12333222 222333 6678999 999998 8 4433
No 207
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=52.15 E-value=8.2 Score=43.50 Aligned_cols=57 Identities=12% Similarity=0.056 Sum_probs=32.1
Q ss_pred hhhcCceeEeecCchH----HHHHHHHHHhCCC-eEEecCccccCCCcccccchhhhhcCCceE
Q 042170 385 ILAPIKTVRMTRNRDQ----DAKLVKSLLNQGD-LVICPEGTTCREPYLLRFSPLFAEMSDNII 443 (543)
Q Consensus 385 ~l~~i~tv~v~R~r~~----~~~~~~~~L~~G~-l~iFPEGTtt~g~~Ll~F~~~fa~l~~pV~ 443 (543)
++...|.+.|++|.-. ..+.+++.|++|. ++| +.|-.+...-.+|..++.+...++.
T Consensus 389 l~~~~g~~~vn~D~lg~~~~~~~~a~~~L~~G~sVVI--DaTn~~~~~R~~~i~lAk~~gv~v~ 450 (526)
T TIGR01663 389 FFQPAGYKHVNADTLGSTQNCLTACERALDQGKRCAI--DNTNPDAASRAKFLQCARAAGIPCR 450 (526)
T ss_pred HHHHcCCeEECcHHHHHHHHHHHHHHHHHhCCCcEEE--ECCCCCHHHHHHHHHHHHHcCCeEE
Confidence 3444566777664322 2345567788884 766 5555554445556555555554444
No 208
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=52.14 E-value=31 Score=38.74 Aligned_cols=83 Identities=19% Similarity=0.176 Sum_probs=61.3
Q ss_pred cCHHHHHHHH---hCC-cEEEEeCCcHHHHHHHHHhhCCCcEEEeceEEEeCeEEeeeeccCCC-cHHHHHHHHHHhcCC
Q 042170 147 VGLEIFEVLK---KGG-KTVAVSNMPQVMIDSFLRDYLDIDLVVGRELKVFCGYFVGLMEDKKK-NILVLQEIIKQENSG 221 (543)
Q Consensus 147 l~~ea~~~~~---~~g-~~v~VSAsp~~~vepfak~~lG~d~VlgTelev~~G~~TG~~~g~~~-g~~Kv~~l~~~~~~~ 221 (543)
+.|...|++. +-| +.|++|.=-+.-....++| -|+|..++ +| -+.|.+.++++-.+.
T Consensus 448 vK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~E-AGVDdfiA-----------------eatPEdK~~~I~~eQ~~g 509 (681)
T COG2216 448 VKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAE-AGVDDFIA-----------------EATPEDKLALIRQEQAEG 509 (681)
T ss_pred cchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHH-hCchhhhh-----------------cCChHHHHHHHHHHHhcC
Confidence 5555555444 567 7788887777777777776 67775443 35 478999999886555
Q ss_pred ceEE-EeCCCCCcchhcccccccCceeeccC
Q 042170 222 DVIG-ISSLNSSLDHYKLFLQQCNEVYLVRS 251 (543)
Q Consensus 222 ~~~a-ygD~~S~~D~~~m~L~~~~~~y~v~p 251 (543)
..+| -|| ...|.| - |+.++-..+.|.
T Consensus 510 rlVAMtGD--GTNDAP-A-LAqAdVg~AMNs 536 (681)
T COG2216 510 RLVAMTGD--GTNDAP-A-LAQADVGVAMNS 536 (681)
T ss_pred cEEEEcCC--CCCcch-h-hhhcchhhhhcc
Confidence 5664 599 999999 8 799999998886
No 209
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=51.96 E-value=25 Score=34.59 Aligned_cols=39 Identities=10% Similarity=-0.048 Sum_probs=29.3
Q ss_pred HHHHHHH---HhcCC--ceEEEeCCCCCcchhcccccccCceeeccCC
Q 042170 210 VLQEIIK---QENSG--DVIGISSLNSSLDHYKLFLQQCNEVYLVRST 252 (543)
Q Consensus 210 Kv~~l~~---~~~~~--~~~aygD~~S~~D~~~m~L~~~~~~y~v~p~ 252 (543)
|-.+++. .++-. ..+++|| |..|.+ | ++.++.+|++..+
T Consensus 160 K~~al~~l~~~~g~~~~~~i~~GD--~~nD~~-m-l~~~~~~iav~na 203 (236)
T TIGR02471 160 KGLALRYLSYRWGLPLEQILVAGD--SGNDEE-M-LRGLTLGVVVGNH 203 (236)
T ss_pred hHHHHHHHHHHhCCCHHHEEEEcC--CccHHH-H-HcCCCcEEEEcCC
Confidence 5555544 44433 5689999 999999 9 6999999999653
No 210
>PLN02887 hydrolase family protein
Probab=50.21 E-value=11 Score=42.91 Aligned_cols=41 Identities=12% Similarity=0.029 Sum_probs=32.1
Q ss_pred HHHHHHHHHhc---CC--ceEEEeCCCCCcchhcccccccCceeeccCCc
Q 042170 209 LVLQEIIKQEN---SG--DVIGISSLNSSLDHYKLFLQQCNEVYLVRSTD 253 (543)
Q Consensus 209 ~Kv~~l~~~~~---~~--~~~aygD~~S~~D~~~m~L~~~~~~y~v~p~~ 253 (543)
.|..+|+.+.. -. ..+|+|| +..|.+ | |+.|+++|++-.+.
T Consensus 507 SKG~ALk~L~e~lGI~~eeviAFGD--s~NDIe-M-Le~AG~gVAMgNA~ 552 (580)
T PLN02887 507 SKGNGVKMLLNHLGVSPDEIMAIGD--GENDIE-M-LQLASLGVALSNGA 552 (580)
T ss_pred CHHHHHHHHHHHcCCCHHHEEEEec--chhhHH-H-HHHCCCEEEeCCCC
Confidence 47777776653 22 5679999 999999 9 79999999996433
No 211
>PRK10444 UMP phosphatase; Provisional
Probab=49.64 E-value=9 Score=38.72 Aligned_cols=20 Identities=20% Similarity=0.554 Sum_probs=16.8
Q ss_pred eEEEEEcCCccccCCCchHH
Q 042170 64 RTLIFNVEGFLLKSSSLFPY 83 (543)
Q Consensus 64 ~~a~FD~DGTLl~~~s~fp~ 83 (543)
+..+||+||||++++..+|.
T Consensus 2 ~~v~~DlDGtL~~~~~~~p~ 21 (248)
T PRK10444 2 KNVICDIDGVLMHDNVAVPG 21 (248)
T ss_pred cEEEEeCCCceEeCCeeCcc
Confidence 47899999999999877764
No 212
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=49.30 E-value=9.2 Score=35.28 Aligned_cols=23 Identities=17% Similarity=0.159 Sum_probs=17.3
Q ss_pred CcEEEEeCCcHHHHHHHHHhhCCC
Q 042170 159 GKTVAVSNMPQVMIDSFLRDYLDI 182 (543)
Q Consensus 159 g~~v~VSAsp~~~vepfak~~lG~ 182 (543)
-++++.|++.+.++++.++. +.-
T Consensus 52 ~ev~i~T~~~~~ya~~v~~~-ldp 74 (159)
T PF03031_consen 52 YEVVIWTSASEEYAEPVLDA-LDP 74 (159)
T ss_dssp CEEEEE-SS-HHHHHHHHHH-HTT
T ss_pred ceEEEEEeehhhhhhHHHHh-hhh
Confidence 47889999999999999875 653
No 213
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=48.93 E-value=8.4 Score=33.40 Aligned_cols=18 Identities=22% Similarity=0.626 Sum_probs=14.6
Q ss_pred EEEEcCCccccCCCchHH
Q 042170 66 LIFNVEGFLLKSSSLFPY 83 (543)
Q Consensus 66 a~FD~DGTLl~~~s~fp~ 83 (543)
.+||+||||...+..+|-
T Consensus 1 ~l~D~dGvl~~g~~~ipg 18 (101)
T PF13344_consen 1 FLFDLDGVLYNGNEPIPG 18 (101)
T ss_dssp EEEESTTTSEETTEE-TT
T ss_pred CEEeCccEeEeCCCcCcC
Confidence 479999999999888774
No 214
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=48.61 E-value=9.4 Score=38.40 Aligned_cols=19 Identities=16% Similarity=0.520 Sum_probs=16.2
Q ss_pred eEEEEEcCCccccCCCchH
Q 042170 64 RTLIFNVEGFLLKSSSLFP 82 (543)
Q Consensus 64 ~~a~FD~DGTLl~~~s~fp 82 (543)
+..+||+||||++++..+|
T Consensus 2 ~~~~~D~DGtl~~~~~~i~ 20 (249)
T TIGR01457 2 KGYLIDLDGTMYKGKERIP 20 (249)
T ss_pred CEEEEeCCCceEcCCeeCc
Confidence 4689999999999987765
No 215
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=47.30 E-value=25 Score=42.52 Aligned_cols=100 Identities=11% Similarity=0.141 Sum_probs=64.5
Q ss_pred hcCHHHHHHHH---hCC-cEEEEeCCcHHHHHHHHHhhCCCc-----EEEeceEEEe-CeEEeeeecc----CCC-cHHH
Q 042170 146 NVGLEIFEVLK---KGG-KTVAVSNMPQVMIDSFLRDYLDID-----LVVGRELKVF-CGYFVGLMED----KKK-NILV 210 (543)
Q Consensus 146 ~l~~ea~~~~~---~~g-~~v~VSAsp~~~vepfak~~lG~d-----~VlgTelev~-~G~~TG~~~g----~~~-g~~K 210 (543)
.+++++-+.++ ++| +++++|.=-..-++..+++ +|+. .+-|.+++.. +..+...+.. ..+ -++|
T Consensus 579 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~-~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~K 657 (941)
T TIGR01517 579 PLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARN-CGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLDK 657 (941)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHH-cCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHHH
Confidence 37777776555 678 8999998888889999997 8984 2334443311 0000000000 112 2678
Q ss_pred HHHHHHHhcCCceE-EEeCCCCCcchhcccccccCceeecc
Q 042170 211 LQEIIKQENSGDVI-GISSLNSSLDHYKLFLQQCNEVYLVR 250 (543)
Q Consensus 211 v~~l~~~~~~~~~~-aygD~~S~~D~~~m~L~~~~~~y~v~ 250 (543)
.+-++.+-...+.+ ..|| +..|.| + |+.|+=..++.
T Consensus 658 ~~iV~~lq~~g~vVam~GD--GvNDap-A-Lk~AdVGIAmg 694 (941)
T TIGR01517 658 QLLVLMLKDMGEVVAVTGD--GTNDAP-A-LKLADVGFSMG 694 (941)
T ss_pred HHHHHHHHHCCCEEEEECC--CCchHH-H-HHhCCcceecC
Confidence 88777764433344 6799 999999 9 89999988885
No 216
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=46.58 E-value=28 Score=35.06 Aligned_cols=85 Identities=13% Similarity=0.173 Sum_probs=52.8
Q ss_pred cEEEEeCCcHH----HHHHHHHhhCCCcEEEeceEEEeCeEEeeeeccCCC-cH-HHHHHHHHHhcCC----ceEEEeCC
Q 042170 160 KTVAVSNMPQV----MIDSFLRDYLDIDLVVGRELKVFCGYFVGLMEDKKK-NI-LVLQEIIKQENSG----DVIGISSL 229 (543)
Q Consensus 160 ~~v~VSAsp~~----~vepfak~~lG~d~VlgTelev~~G~~TG~~~g~~~-g~-~Kv~~l~~~~~~~----~~~aygD~ 229 (543)
..++++-|-+. +.+ -+.+ .|+..|-|.+.-++ +. +| |. .-++.+.+.+... ..+|.||
T Consensus 150 seti~~rs~d~~~~~~~~-~L~e-~glt~v~garf~~v-------~~--as~gKg~Aa~~ll~~y~rl~~~r~t~~~GD- 217 (274)
T COG3769 150 SETIIWRSSDERMAQFTA-RLNE-RGLTFVHGARFWHV-------LD--ASAGKGQAANWLLETYRRLGGARTTLGLGD- 217 (274)
T ss_pred hhheeecccchHHHHHHH-HHHh-cCceEEeccceEEE-------ec--cccCccHHHHHHHHHHHhcCceeEEEecCC-
Confidence 55666644444 333 2453 78877777665442 22 33 32 2334455555432 4789999
Q ss_pred CCCcchhcccccccCceeeccCCcccCCccc
Q 042170 230 NSSLDHYKLFLQQCNEVYLVRSTDKRSWQHL 260 (543)
Q Consensus 230 ~S~~D~~~m~L~~~~~~y~v~p~~~~~w~~l 260 (543)
|.+|.| | ++..+.++.|. .=+|+|..+
T Consensus 218 -g~nD~P-l-~ev~d~AfiV~-~lnre~~~l 244 (274)
T COG3769 218 -GPNDAP-L-LEVMDYAFIVK-GLNREGVHL 244 (274)
T ss_pred -CCCccc-H-HHhhhhheeec-ccchhhhhc
Confidence 999999 9 69999999997 234566655
No 217
>PTZ00174 phosphomannomutase; Provisional
Probab=45.95 E-value=13 Score=37.25 Aligned_cols=21 Identities=29% Similarity=0.493 Sum_probs=17.2
Q ss_pred CeEEEEEcCCccccCCCchHH
Q 042170 63 ERTLIFNVEGFLLKSSSLFPY 83 (543)
Q Consensus 63 ~~~a~FD~DGTLl~~~s~fp~ 83 (543)
.++.+||+||||+.++..+..
T Consensus 5 ~klia~DlDGTLL~~~~~is~ 25 (247)
T PTZ00174 5 KTILLFDVDGTLTKPRNPITQ 25 (247)
T ss_pred CeEEEEECcCCCcCCCCCCCH
Confidence 579999999999998865543
No 218
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=45.92 E-value=81 Score=31.80 Aligned_cols=39 Identities=18% Similarity=0.240 Sum_probs=27.0
Q ss_pred HHhcCHHHH--HHHHh--CCcEEEEeCCcHHHHHHHHHhhCCCc
Q 042170 144 LENVGLEIF--EVLKK--GGKTVAVSNMPQVMIDSFLRDYLDID 183 (543)
Q Consensus 144 ~e~l~~ea~--~~~~~--~g~~v~VSAsp~~~vepfak~~lG~d 183 (543)
++++.|+.. +++-+ ..++++.|.++++-+.-.++. ||+.
T Consensus 96 lq~LkPD~~LRnlLL~l~~r~k~~FTNa~k~HA~r~Lk~-LGie 138 (244)
T KOG3109|consen 96 LQDLKPDPVLRNLLLSLKKRRKWIFTNAYKVHAIRILKK-LGIE 138 (244)
T ss_pred HhhcCCCHHHHHHHHhCccccEEEecCCcHHHHHHHHHH-hChH
Confidence 445666532 22222 234899999999999999996 9974
No 219
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=45.38 E-value=45 Score=32.00 Aligned_cols=31 Identities=19% Similarity=0.182 Sum_probs=23.5
Q ss_pred HHHHHhCC-cEEEEeCC-cHHHHHHHHHhhCCCc
Q 042170 152 FEVLKKGG-KTVAVSNM-PQVMIDSFLRDYLDID 183 (543)
Q Consensus 152 ~~~~~~~g-~~v~VSAs-p~~~vepfak~~lG~d 183 (543)
++.+++.| ++.++|++ +..+++.+++. +|++
T Consensus 54 L~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~-~~l~ 86 (174)
T TIGR01685 54 LQTLKDAGTYLATASWNDVPEWAYEILGT-FEIT 86 (174)
T ss_pred HHHHHHCCCEEEEEeCCCChHHHHHHHHh-CCcC
Confidence 34455778 77888977 99999998874 7764
No 220
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=45.30 E-value=12 Score=37.90 Aligned_cols=19 Identities=21% Similarity=0.572 Sum_probs=15.8
Q ss_pred eEEEEEcCCccccCCC----chH
Q 042170 64 RTLIFNVEGFLLKSSS----LFP 82 (543)
Q Consensus 64 ~~a~FD~DGTLl~~~s----~fp 82 (543)
++.+||+||||..++. .+|
T Consensus 2 k~i~~D~DGtl~~~~~~~~~~~~ 24 (257)
T TIGR01458 2 KGVLLDISGVLYISDAKSGVAVP 24 (257)
T ss_pred CEEEEeCCCeEEeCCCcccCcCC
Confidence 4789999999998866 565
No 221
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=45.05 E-value=8.6 Score=37.92 Aligned_cols=13 Identities=23% Similarity=0.447 Sum_probs=11.0
Q ss_pred EEEEcCCccccCC
Q 042170 66 LIFNVEGFLLKSS 78 (543)
Q Consensus 66 a~FD~DGTLl~~~ 78 (543)
.++|+||||+.++
T Consensus 2 i~~DlDgTLl~~~ 14 (236)
T TIGR02471 2 IITDLDNTLLGDD 14 (236)
T ss_pred eEEeccccccCCH
Confidence 6899999999753
No 222
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=44.88 E-value=94 Score=29.17 Aligned_cols=89 Identities=18% Similarity=0.029 Sum_probs=46.4
Q ss_pred HHHHHHhCC-cEEEEeCCcH---------------HHHHHHHHhhCC--CcEEEeceEEEeCeEEeeeecc-CCC---cH
Q 042170 151 IFEVLKKGG-KTVAVSNMPQ---------------VMIDSFLRDYLD--IDLVVGRELKVFCGYFVGLMED-KKK---NI 208 (543)
Q Consensus 151 a~~~~~~~g-~~v~VSAsp~---------------~~vepfak~~lG--~d~VlgTelev~~G~~TG~~~g-~~~---g~ 208 (543)
+++.+++.| +.+++|+.+. .+.+..+++ +| +|.++...... .| ++.+.. ..| .+
T Consensus 34 ~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~i~~~~~~~-~~--~~~~~~~~~~~KP~p 109 (176)
T TIGR00213 34 ALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAE-RDVDLDGIYYCPHHP-EG--VEEFRQVCDCRKPKP 109 (176)
T ss_pred HHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHH-cCCCccEEEECCCCC-cc--cccccCCCCCCCCCH
Confidence 345566778 8889998885 344444544 44 34444322111 11 222211 111 23
Q ss_pred HHHHHHHHHhcCC--ceEEEeCCCCCcchhcccccccCcee
Q 042170 209 LVLQEIIKQENSG--DVIGISSLNSSLDHYKLFLQQCNEVY 247 (543)
Q Consensus 209 ~Kv~~l~~~~~~~--~~~aygD~~S~~D~~~m~L~~~~~~y 247 (543)
+-...+.+.++-. ..+..|| |..|.. . -..++-..
T Consensus 110 ~~~~~a~~~~~~~~~~~v~VGD--s~~Di~-a-A~~aG~~~ 146 (176)
T TIGR00213 110 GMLLQARKELHIDMAQSYMVGD--KLEDMQ-A-GVAAKVKT 146 (176)
T ss_pred HHHHHHHHHcCcChhhEEEEcC--CHHHHH-H-HHHCCCcE
Confidence 4444444444533 6788999 888987 5 45566654
No 223
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=44.80 E-value=1.9e+02 Score=25.33 Aligned_cols=13 Identities=15% Similarity=0.585 Sum_probs=11.5
Q ss_pred eEEEEEcCCcccc
Q 042170 64 RTLIFNVEGFLLK 76 (543)
Q Consensus 64 ~~a~FD~DGTLl~ 76 (543)
++++||+||||+.
T Consensus 1 k~~~~D~dgtL~~ 13 (132)
T TIGR01662 1 KGVVLDLDGTLTD 13 (132)
T ss_pred CEEEEeCCCceec
Confidence 4789999999995
No 224
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=44.73 E-value=12 Score=38.31 Aligned_cols=20 Identities=25% Similarity=0.536 Sum_probs=16.7
Q ss_pred eEEEEEcCCccccCCCchHH
Q 042170 64 RTLIFNVEGFLLKSSSLFPY 83 (543)
Q Consensus 64 ~~a~FD~DGTLl~~~s~fp~ 83 (543)
++.+||+||||..++..+|-
T Consensus 3 ~~~~~D~DGtl~~~~~~~~g 22 (279)
T TIGR01452 3 QGFIFDCDGVLWLGERVVPG 22 (279)
T ss_pred cEEEEeCCCceEcCCeeCcC
Confidence 57899999999998776663
No 225
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=44.65 E-value=13 Score=38.88 Aligned_cols=31 Identities=19% Similarity=0.210 Sum_probs=23.7
Q ss_pred HHHHHhCC-cEEEEeCCcHHHHHHHHHhhCCCc
Q 042170 152 FEVLKKGG-KTVAVSNMPQVMIDSFLRDYLDID 183 (543)
Q Consensus 152 ~~~~~~~g-~~v~VSAsp~~~vepfak~~lG~d 183 (543)
++.+++.| +..++|..++..++..+++ +|++
T Consensus 157 L~eLkekGikLaIvTNg~Re~v~~~Le~-lgL~ 188 (303)
T PHA03398 157 LDELKERGCVLVLWSYGNREHVVHSLKE-TKLE 188 (303)
T ss_pred HHHHHHCCCEEEEEcCCChHHHHHHHHH-cCCC
Confidence 34455678 6678898888888998886 7876
No 226
>PLN02645 phosphoglycolate phosphatase
Probab=44.29 E-value=12 Score=38.93 Aligned_cols=20 Identities=30% Similarity=0.607 Sum_probs=17.0
Q ss_pred CeEEEEEcCCccccCCCchH
Q 042170 63 ERTLIFNVEGFLLKSSSLFP 82 (543)
Q Consensus 63 ~~~a~FD~DGTLl~~~s~fp 82 (543)
-++.+||+||||.+.+..+|
T Consensus 28 ~~~~~~D~DGtl~~~~~~~~ 47 (311)
T PLN02645 28 VETFIFDCDGVIWKGDKLIE 47 (311)
T ss_pred CCEEEEeCcCCeEeCCccCc
Confidence 46999999999999876665
No 227
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=43.49 E-value=41 Score=33.02 Aligned_cols=22 Identities=18% Similarity=0.184 Sum_probs=19.1
Q ss_pred cEEEEeCCcHHHHHHHHHhhCCC
Q 042170 160 KTVAVSNMPQVMIDSFLRDYLDI 182 (543)
Q Consensus 160 ~~v~VSAsp~~~vepfak~~lG~ 182 (543)
.+++-||+-..|+++.+++ +|+
T Consensus 62 eIvVwTAa~~~ya~~~l~~-l~~ 83 (195)
T TIGR02245 62 DIVIWSATSMKWIEIKMTE-LGV 83 (195)
T ss_pred EEEEEecCCHHHHHHHHHH-hcc
Confidence 7888899999999999987 764
No 228
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=43.13 E-value=50 Score=40.54 Aligned_cols=99 Identities=9% Similarity=-0.054 Sum_probs=64.2
Q ss_pred cCHHHHHHHH---hCC-cEEEEeCCcHHHHHHHHHhhCCCc--EEEeceEEE-eCeEEeeeecc----------------
Q 042170 147 VGLEIFEVLK---KGG-KTVAVSNMPQVMIDSFLRDYLDID--LVVGRELKV-FCGYFVGLMED---------------- 203 (543)
Q Consensus 147 l~~ea~~~~~---~~g-~~v~VSAsp~~~vepfak~~lG~d--~VlgTelev-~~G~~TG~~~g---------------- 203 (543)
+++++-+.++ ++| ++++||.=-..-+..++++ +|+. ..+.+.-+. .+...||.--.
T Consensus 647 ~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~-~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~~V 725 (1053)
T TIGR01523 647 PRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQE-VGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALCLV 725 (1053)
T ss_pred CchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH-cCCCCccccccccccccceeeehHHhhhcCHHHHHHHhhcCeE
Confidence 6777666555 788 9999998888899999998 8983 222111111 12334553211
Q ss_pred -CCC-cHHHHHHHHHHhcCC-ceEEEeCCCCCcchhcccccccCceeecc
Q 042170 204 -KKK-NILVLQEIIKQENSG-DVIGISSLNSSLDHYKLFLQQCNEVYLVR 250 (543)
Q Consensus 204 -~~~-g~~Kv~~l~~~~~~~-~~~aygD~~S~~D~~~m~L~~~~~~y~v~ 250 (543)
..+ -+.|.+-++.+-... .....|| +..|.| + |+.++-...+.
T Consensus 726 ~ar~sP~~K~~iV~~lq~~g~~Vam~GD--GvNDap-a-Lk~AdVGIAmg 771 (1053)
T TIGR01523 726 IARCAPQTKVKMIEALHRRKAFCAMTGD--GVNDSP-S-LKMANVGIAMG 771 (1053)
T ss_pred EEecCHHHHHHHHHHHHhcCCeeEEeCC--CcchHH-H-HHhCCccEecC
Confidence 112 257777777664333 3347799 999999 9 89999998874
No 229
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=42.95 E-value=15 Score=36.67 Aligned_cols=39 Identities=13% Similarity=0.033 Sum_probs=30.3
Q ss_pred HHHHHHHHHhc---CC--ceEEEeCCCCCcchhcccccccCceeeccC
Q 042170 209 LVLQEIIKQEN---SG--DVIGISSLNSSLDHYKLFLQQCNEVYLVRS 251 (543)
Q Consensus 209 ~Kv~~l~~~~~---~~--~~~aygD~~S~~D~~~m~L~~~~~~y~v~p 251 (543)
.|..+++.+.. -. ..+++|| |..|.+ | ++.|+.++++..
T Consensus 188 ~K~~~i~~~~~~~~~~~~~~~~~GD--~~nD~~-m-~~~~~~~~a~~n 231 (256)
T TIGR00099 188 SKGSALQSLAEALGISLEDVIAFGD--GMNDIE-M-LEAAGYGVAMGN 231 (256)
T ss_pred ChHHHHHHHHHHcCCCHHHEEEeCC--cHHhHH-H-HHhCCceeEecC
Confidence 47766666643 22 5679999 999999 9 799999999953
No 230
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=42.09 E-value=14 Score=34.83 Aligned_cols=14 Identities=7% Similarity=0.349 Sum_probs=12.2
Q ss_pred eEEEEEcCCccccC
Q 042170 64 RTLIFNVEGFLLKS 77 (543)
Q Consensus 64 ~~a~FD~DGTLl~~ 77 (543)
++++||.||||+..
T Consensus 2 ~~~~~D~Dgtl~~~ 15 (176)
T TIGR00213 2 KAIFLDRDGTINID 15 (176)
T ss_pred CEEEEeCCCCEeCC
Confidence 68999999999953
No 231
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=41.90 E-value=14 Score=34.78 Aligned_cols=16 Identities=19% Similarity=0.509 Sum_probs=13.7
Q ss_pred eEEEEEcCCccccCCC
Q 042170 64 RTLIFNVEGFLLKSSS 79 (543)
Q Consensus 64 ~~a~FD~DGTLl~~~s 79 (543)
++++||.||||+..-+
T Consensus 2 ~~~~~d~dg~l~~~~~ 17 (161)
T TIGR01261 2 KILFIDRDGTLIEEPP 17 (161)
T ss_pred CEEEEeCCCCccccCC
Confidence 6899999999998544
No 232
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=41.75 E-value=23 Score=36.11 Aligned_cols=29 Identities=17% Similarity=0.385 Sum_probs=0.0
Q ss_pred CeEEEEEcCCcccc-----CCCchHHHHHHHHhh
Q 042170 63 ERTLIFNVEGFLLK-----SSSLFPYFMLVAFEA 91 (543)
Q Consensus 63 ~~~a~FD~DGTLl~-----~~s~fp~f~~~a~~~ 91 (543)
+.+.+||+||||+. .+...+-.+.-++..
T Consensus 14 ~~li~~D~DGTLl~~~~~p~~~~i~~~~~~~L~~ 47 (266)
T PRK10187 14 NYAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQL 47 (266)
T ss_pred CEEEEEecCCCCCCCCCCcccccCCHHHHHHHHH
No 233
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=41.55 E-value=15 Score=36.58 Aligned_cols=38 Identities=8% Similarity=-0.011 Sum_probs=29.3
Q ss_pred HHHHHHHHHh---cCC--ceEEEeCCCCCcchhcccccccCceeecc
Q 042170 209 LVLQEIIKQE---NSG--DVIGISSLNSSLDHYKLFLQQCNEVYLVR 250 (543)
Q Consensus 209 ~Kv~~l~~~~---~~~--~~~aygD~~S~~D~~~m~L~~~~~~y~v~ 250 (543)
.|..+++.+. +-. ..+++|| |..|.+ | ++.|+.++++.
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD--~~NDi~-m-~~~ag~~vamg 241 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGD--NFNDIS-M-LEAAGLGVAMG 241 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCC--ChhhHH-H-HHhcCceEEec
Confidence 4666666554 322 5689999 999999 9 69999999884
No 234
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=40.22 E-value=16 Score=36.54 Aligned_cols=49 Identities=12% Similarity=0.045 Sum_probs=29.1
Q ss_pred eEEEeCeEEeeeeccCCCcHHHHHHHHHHh---cCC--ceEEEeCCCCCcchhccccccc
Q 042170 189 ELKVFCGYFVGLMEDKKKNILVLQEIIKQE---NSG--DVIGISSLNSSLDHYKLFLQQC 243 (543)
Q Consensus 189 elev~~G~~TG~~~g~~~g~~Kv~~l~~~~---~~~--~~~aygD~~S~~D~~~m~L~~~ 243 (543)
.+.+..|...-.+...+. .|-.+++... +.. ..+..|| +..|.+ || +.+
T Consensus 149 ~~~v~~g~~~~e~~p~~~--~Kg~a~~~~~~~~~~~~~~~i~iGD--~~~D~~-~~-~~~ 202 (244)
T TIGR00685 149 DLEVMDGKAVVELKPRFV--NKGEIVKRLLWHQPGSGISPVYLGD--DITDED-AF-RVV 202 (244)
T ss_pred CEEEEECCeEEEEeeCCC--CHHHHHHHHHHhcccCCCceEEEcC--CCcHHH-HH-HHH
Confidence 355554544444333332 3555555544 322 5679999 999999 94 888
No 235
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=39.94 E-value=15 Score=35.15 Aligned_cols=14 Identities=21% Similarity=0.634 Sum_probs=13.0
Q ss_pred eEEEEEcCCccccC
Q 042170 64 RTLIFNVEGFLLKS 77 (543)
Q Consensus 64 ~~a~FD~DGTLl~~ 77 (543)
++.+||+||+||..
T Consensus 8 ~~~v~d~dGv~tdg 21 (169)
T TIGR02726 8 KLVILDVDGVMTDG 21 (169)
T ss_pred eEEEEeCceeeECC
Confidence 78999999999977
No 236
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=39.22 E-value=1.4e+02 Score=27.94 Aligned_cols=67 Identities=19% Similarity=0.131 Sum_probs=41.1
Q ss_pred HHHHHhCC-cEEEEeCCc-HHHHHHHHHhhCCCcEEEeceEEEeCeEEeeeeccCCCcHHHHHHHHHHhcCC--ceEEEe
Q 042170 152 FEVLKKGG-KTVAVSNMP-QVMIDSFLRDYLDIDLVVGRELKVFCGYFVGLMEDKKKNILVLQEIIKQENSG--DVIGIS 227 (543)
Q Consensus 152 ~~~~~~~g-~~v~VSAsp-~~~vepfak~~lG~d~VlgTelev~~G~~TG~~~g~~~g~~Kv~~l~~~~~~~--~~~ayg 227 (543)
++.+++.| +++++|..+ +.+++.+++. +|+... .+. .+. ..+-...+.+..+-. ..+.+|
T Consensus 52 L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~-~gl~~~------------~~~--~KP-~p~~~~~~l~~~~~~~~~~l~IG 115 (170)
T TIGR01668 52 IEELKAAGRKLLIVSNNAGEQRAKAVEKA-LGIPVL------------PHA--VKP-PGCAFRRAHPEMGLTSEQVAVVG 115 (170)
T ss_pred HHHHHHcCCEEEEEeCCchHHHHHHHHHH-cCCEEE------------cCC--CCC-ChHHHHHHHHHcCCCHHHEEEEC
Confidence 45556667 888999888 7888888774 776532 111 111 234444444444433 577899
Q ss_pred CCCCC-cchh
Q 042170 228 SLNSS-LDHY 236 (543)
Q Consensus 228 D~~S~-~D~~ 236 (543)
| +. .|..
T Consensus 116 D--s~~~Di~ 123 (170)
T TIGR01668 116 D--RLFTDVM 123 (170)
T ss_pred C--cchHHHH
Confidence 9 76 5876
No 237
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=39.14 E-value=1.4e+02 Score=27.22 Aligned_cols=18 Identities=11% Similarity=0.218 Sum_probs=14.6
Q ss_pred eEEEEEcCCccccCCCch
Q 042170 64 RTLIFNVEGFLLKSSSLF 81 (543)
Q Consensus 64 ~~a~FD~DGTLl~~~s~f 81 (543)
++.+||+||||+...|..
T Consensus 1 ~~~~~d~dgtl~~~~~~~ 18 (147)
T TIGR01656 1 PALFLDRDGVINEDTVSD 18 (147)
T ss_pred CeEEEeCCCceeccCCcc
Confidence 368999999999886644
No 238
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=38.87 E-value=21 Score=35.71 Aligned_cols=20 Identities=25% Similarity=0.649 Sum_probs=15.7
Q ss_pred cCeEEEEEcCCccccCCCchHHH
Q 042170 62 SERTLIFNVEGFLLKSSSLFPYF 84 (543)
Q Consensus 62 ~~~~a~FD~DGTLl~~~s~fp~f 84 (543)
...+++||+|+|+| |..+|+
T Consensus 71 ~~~avv~DIDeTvL---sn~~y~ 90 (229)
T PF03767_consen 71 KPPAVVFDIDETVL---SNSPYY 90 (229)
T ss_dssp SEEEEEEESBTTTE---EHHHHH
T ss_pred CCcEEEEECCcccc---cCHHHH
Confidence 46799999999999 445554
No 239
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=38.62 E-value=1.4e+02 Score=30.34 Aligned_cols=92 Identities=16% Similarity=0.197 Sum_probs=51.9
Q ss_pred HHHHHHHHhCC-cEEEEeCCcHHHHHHHHHhh--CCCcEEEec---e-----EEEeC------eEEeeeeccCCCcHHHH
Q 042170 149 LEIFEVLKKGG-KTVAVSNMPQVMIDSFLRDY--LDIDLVVGR---E-----LKVFC------GYFVGLMEDKKKNILVL 211 (543)
Q Consensus 149 ~ea~~~~~~~g-~~v~VSAsp~~~vepfak~~--lG~d~VlgT---e-----lev~~------G~~TG~~~g~~~g~~Kv 211 (543)
|+.++.+++.| .++++|+.+.-|..+.+++. +|+|--=.. + ....+ =++-|-+-.. |..|-
T Consensus 87 ~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlft~--~~~KG 164 (252)
T PF11019_consen 87 PNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGIDFSSSSFPEDGIISFPVFDSALSRAPSFYDGILFTG--GQDKG 164 (252)
T ss_pred HHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCCccccccccCcceecccccCCCCCCceeecCeEEeC--CCccH
Confidence 33455566788 78889999999998887653 777621111 0 00000 1133433322 24577
Q ss_pred HHHHHHhcC---C--ceEEEeCCCCCcchhcccccccCc
Q 042170 212 QEIIKQENS---G--DVIGISSLNSSLDHYKLFLQQCNE 245 (543)
Q Consensus 212 ~~l~~~~~~---~--~~~aygD~~S~~D~~~m~L~~~~~ 245 (543)
..|..++.. . ..+-..| +......| -++|+.
T Consensus 165 ~~L~~fL~~~~~~pk~IIfIDD--~~~nl~sv-~~a~k~ 200 (252)
T PF11019_consen 165 EVLKYFLDKINQSPKKIIFIDD--NKENLKSV-EKACKK 200 (252)
T ss_pred HHHHHHHHHcCCCCCeEEEEeC--CHHHHHHH-HHHHhh
Confidence 777777653 2 3457777 66655445 456654
No 240
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=38.56 E-value=58 Score=34.79 Aligned_cols=31 Identities=23% Similarity=0.237 Sum_probs=23.9
Q ss_pred HHHHHHhCC-cEEEEeCCcHHHHHHHHHhhCC
Q 042170 151 IFEVLKKGG-KTVAVSNMPQVMIDSFLRDYLD 181 (543)
Q Consensus 151 a~~~~~~~g-~~v~VSAsp~~~vepfak~~lG 181 (543)
.++.+++.| +..++|+|+..+++..++..+|
T Consensus 192 lL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g 223 (343)
T TIGR02244 192 FLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLG 223 (343)
T ss_pred HHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhC
Confidence 445555778 7789999999999999885235
No 241
>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]
Probab=37.75 E-value=16 Score=41.78 Aligned_cols=17 Identities=24% Similarity=0.522 Sum_probs=15.1
Q ss_pred CeEEEEEcCCccccCCC
Q 042170 63 ERTLIFNVEGFLLKSSS 79 (543)
Q Consensus 63 ~~~a~FD~DGTLl~~~s 79 (543)
.++++-|+|||||++|-
T Consensus 530 ~kIVISDIDGTITKSDv 546 (738)
T KOG2116|consen 530 DKIVISDIDGTITKSDV 546 (738)
T ss_pred CcEEEecCCCceEhhhh
Confidence 68999999999999954
No 242
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=37.13 E-value=55 Score=30.00 Aligned_cols=24 Identities=21% Similarity=0.097 Sum_probs=20.0
Q ss_pred CC-cEEEEeCCcHHHHHHHHHhhCCC
Q 042170 158 GG-KTVAVSNMPQVMIDSFLRDYLDI 182 (543)
Q Consensus 158 ~g-~~v~VSAsp~~~vepfak~~lG~ 182 (543)
.+ +++++|++++.+++..++. +|.
T Consensus 59 ~~~~l~I~Ts~~~~~~~~il~~-l~~ 83 (148)
T smart00577 59 ELFELVVFTAGLRMYADPVLDL-LDP 83 (148)
T ss_pred hccEEEEEeCCcHHHHHHHHHH-hCc
Confidence 35 7889999999999999885 665
No 243
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=37.05 E-value=22 Score=33.60 Aligned_cols=35 Identities=14% Similarity=-0.053 Sum_probs=21.1
Q ss_pred HHHHHHHHHhcCC--ceEEEeCCCCCcchhcccccccCcee
Q 042170 209 LVLQEIIKQENSG--DVIGISSLNSSLDHYKLFLQQCNEVY 247 (543)
Q Consensus 209 ~Kv~~l~~~~~~~--~~~aygD~~S~~D~~~m~L~~~~~~y 247 (543)
+-...+.+.++-. ..+.+|| |..|.. . -..+|-..
T Consensus 107 ~~~~~~~~~l~~~~~~~~~VgD--s~~Di~-~-A~~aG~~~ 143 (181)
T PRK08942 107 GMLLSIAERLNIDLAGSPMVGD--SLRDLQ-A-AAAAGVTP 143 (181)
T ss_pred HHHHHHHHHcCCChhhEEEEeC--CHHHHH-H-HHHCCCeE
Confidence 3334444444433 6778999 888987 6 45666443
No 244
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=37.03 E-value=58 Score=32.39 Aligned_cols=39 Identities=13% Similarity=0.020 Sum_probs=28.3
Q ss_pred HHHHHH---HHhcCC--ceEEEeCCCCCcchhcccccc-cCceeeccCC
Q 042170 210 VLQEII---KQENSG--DVIGISSLNSSLDHYKLFLQQ-CNEVYLVRST 252 (543)
Q Consensus 210 Kv~~l~---~~~~~~--~~~aygD~~S~~D~~~m~L~~-~~~~y~v~p~ 252 (543)
|-.+++ +.++-. ..+++|| +..|.+ | +.. ++..|+|..+
T Consensus 168 K~~al~~l~~~~~i~~~~~i~~GD--~~ND~~-m-l~~~~~~~va~~na 212 (249)
T TIGR01485 168 KGQALQYLLQKLAMEPSQTLVCGD--SGNDIE-L-FEIGSVRGVIVSNA 212 (249)
T ss_pred hHHHHHHHHHHcCCCccCEEEEEC--ChhHHH-H-HHccCCcEEEECCC
Confidence 444444 444422 6789999 999999 9 697 7899999643
No 245
>PLN02382 probable sucrose-phosphatase
Probab=36.99 E-value=42 Score=36.63 Aligned_cols=27 Identities=15% Similarity=0.083 Sum_probs=23.5
Q ss_pred ceEEEeCCCCCcchhcccccccC-ceeeccCC
Q 042170 222 DVIGISSLNSSLDHYKLFLQQCN-EVYLVRST 252 (543)
Q Consensus 222 ~~~aygD~~S~~D~~~m~L~~~~-~~y~v~p~ 252 (543)
..+++|| |..|.+ | |+.|+ +++++..+
T Consensus 196 ~~iafGD--s~NDle-M-l~~ag~~gvam~NA 223 (413)
T PLN02382 196 NTLVCGD--SGNDAE-L-FSVPDVYGVMVSNA 223 (413)
T ss_pred cEEEEeC--CHHHHH-H-HhcCCCCEEEEcCC
Confidence 5689999 999999 9 69999 89999543
No 246
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=36.83 E-value=94 Score=27.79 Aligned_cols=14 Identities=14% Similarity=0.579 Sum_probs=12.1
Q ss_pred eEEEEEcCCccccC
Q 042170 64 RTLIFNVEGFLLKS 77 (543)
Q Consensus 64 ~~a~FD~DGTLl~~ 77 (543)
++.+||+||||+..
T Consensus 1 kli~~DlD~Tl~~~ 14 (128)
T TIGR01681 1 KVIVFDLDNTLWTG 14 (128)
T ss_pred CEEEEeCCCCCCCC
Confidence 46899999999966
No 247
>PF04144 SCAMP: SCAMP family; InterPro: IPR007273 In vertebrates, secretory carrier membrane proteins (SCAMPs) 1-3 constitute a family of putative membrane-trafficking proteins composed of cytoplasmic N-terminal sequences with NPF repeats, four central transmembrane regions (TMRs), and a cytoplasmic tail. SCAMPs probably function in endocytosis by recruiting EH-domain proteins to the N-terminal NPF repeats but may have additional functions mediated by their other sequences [].; GO: 0015031 protein transport, 0016021 integral to membrane
Probab=36.66 E-value=61 Score=31.17 Aligned_cols=23 Identities=22% Similarity=0.416 Sum_probs=18.7
Q ss_pred ccCCcccccCCCCCCeeeeCCCc
Q 042170 254 KRSWQHLSRDKYPKPLIFHDGRL 276 (543)
Q Consensus 254 ~~~w~~l~~~~~~~plifhdgr~ 276 (543)
++|||++++--.-||++.||-.-
T Consensus 2 ~~NwPp~~~~~~~~P~~y~di~~ 24 (177)
T PF04144_consen 2 ENNWPPFPKFCCIKPCFYHDISE 24 (177)
T ss_pred CCCCCCCccccCCCCeEEeCHhH
Confidence 57999998766679999998643
No 248
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=36.61 E-value=1.2e+02 Score=32.26 Aligned_cols=106 Identities=18% Similarity=0.165 Sum_probs=56.5
Q ss_pred CeEEEEEcCCccccCCCchHHHHHHHHhhcchHHHHHHHHHHHHHHhcc---cchhHHHHHHHHhcCcccchhHHHHhhc
Q 042170 63 ERTLIFNVEGFLLKSSSLFPYFMLVAFEAGGLIRAFLLFILYPLICLAG---EEMGLKIMVMVSFFWVKKDNFRVGRAVL 139 (543)
Q Consensus 63 ~~~a~FD~DGTLl~~~s~fp~f~~~a~~~~~~~r~~~ll~~~p~~~~l~---~~~~~k~~~~~~f~G~~~~~~~va~avl 139 (543)
.-.-+||.||.|.++....|- +.++=+++..----+-.|++.+-. --.+.|+..+....|.+++..++.+.=-
T Consensus 35 ~fgfafDIDGVL~RG~~~i~~----~~~Alr~L~~~~g~lkIP~vfLTNGGg~~E~~rA~~lS~~Lgv~Vs~dqviqSHs 110 (389)
T KOG1618|consen 35 TFGFAFDIDGVLFRGHRPIPG----ALKALRRLVDNQGQLKIPFVFLTNGGGILESSRAQELSALLGVEVSADQVIQSHS 110 (389)
T ss_pred ceeEEEecccEEEecCCCCcc----hHHHHHHHHhcCCCeeccEEEEeCCCCcchhhHHHHHHHhhCCccCHHHHHhhcC
Confidence 346789999999999887763 111111110000001224444311 2345666667778888888777554322
Q ss_pred hhhHHHhcCHHHHHHHHhC-CcEEEEeCCcHHHHHHHHHhhCCCcEEE
Q 042170 140 PKFFLENVGLEIFEVLKKG-GKTVAVSNMPQVMIDSFLRDYLDIDLVV 186 (543)
Q Consensus 140 pk~~~e~l~~ea~~~~~~~-g~~v~VSAsp~~~vepfak~~lG~d~Vl 186 (543)
| ++.+.+- .+.|+|..-+.+ ...|+. .|+..|+
T Consensus 111 P-----------~r~l~~~~~k~vLv~G~~~v--r~vAeg-yGFk~Vv 144 (389)
T KOG1618|consen 111 P-----------FRLLVEYHYKRVLVVGQGSV--REVAEG-YGFKNVV 144 (389)
T ss_pred h-----------HHHHhhhhhceEEEecCCcH--HHHhhc-cCcccee
Confidence 2 3444433 366666543332 233554 5998887
No 249
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=36.49 E-value=25 Score=36.17 Aligned_cols=41 Identities=17% Similarity=0.189 Sum_probs=27.4
Q ss_pred CCcCeEEEEEcCCccccCCCchHHHHHHHHhhcchHHHHHHHHHH
Q 042170 60 QVSERTLIFNVEGFLLKSSSLFPYFMLVAFEAGGLIRAFLLFILY 104 (543)
Q Consensus 60 ~~~~~~a~FD~DGTLl~~~s~fp~f~~~a~~~~~~~r~~~ll~~~ 104 (543)
..++.+.++|+||||+.. .-+|+ .+.-..+++..+-.|..-
T Consensus 15 ~a~~~~~~lDyDGTl~~i-~~~p~---~a~~~~~l~~lL~~Las~ 55 (266)
T COG1877 15 NARKRLLFLDYDGTLTEI-VPHPE---AAVPDDRLLSLLQDLASD 55 (266)
T ss_pred cccceEEEEecccccccc-ccCcc---ccCCCHHHHHHHHHHHhc
Confidence 456789999999999966 66665 334455556665555433
No 250
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=36.46 E-value=20 Score=34.12 Aligned_cols=14 Identities=36% Similarity=0.714 Sum_probs=13.0
Q ss_pred eEEEEEcCCccccC
Q 042170 64 RTLIFNVEGFLLKS 77 (543)
Q Consensus 64 ~~a~FD~DGTLl~~ 77 (543)
+.++||+|||||..
T Consensus 9 kLli~DVDGvLTDG 22 (170)
T COG1778 9 KLLILDVDGVLTDG 22 (170)
T ss_pred eEEEEeccceeecC
Confidence 68999999999987
No 251
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=35.84 E-value=22 Score=37.28 Aligned_cols=19 Identities=16% Similarity=0.459 Sum_probs=15.9
Q ss_pred EEEEEcCCccccCCCchHH
Q 042170 65 TLIFNVEGFLLKSSSLFPY 83 (543)
Q Consensus 65 ~a~FD~DGTLl~~~s~fp~ 83 (543)
..+||+||||.++...+|-
T Consensus 2 ~~ifD~DGvL~~g~~~i~g 20 (321)
T TIGR01456 2 GFAFDIDGVLFRGKKPIAG 20 (321)
T ss_pred EEEEeCcCceECCccccHH
Confidence 4689999999999877664
No 252
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=35.59 E-value=16 Score=36.31 Aligned_cols=17 Identities=24% Similarity=0.673 Sum_probs=14.7
Q ss_pred EEEEcCCccccCCCchH
Q 042170 66 LIFNVEGFLLKSSSLFP 82 (543)
Q Consensus 66 a~FD~DGTLl~~~s~fp 82 (543)
.+||+||||+.+...+|
T Consensus 1 ~lfD~DGvL~~~~~~~~ 17 (236)
T TIGR01460 1 FLFDIDGVLWLGHKPIP 17 (236)
T ss_pred CEEeCcCccCcCCccCc
Confidence 37999999999988776
No 253
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=34.24 E-value=38 Score=34.25 Aligned_cols=27 Identities=19% Similarity=0.235 Sum_probs=23.6
Q ss_pred CceEEEeCCCCCcchhcccccccCceeeccC
Q 042170 221 GDVIGISSLNSSLDHYKLFLQQCNEVYLVRS 251 (543)
Q Consensus 221 ~~~~aygD~~S~~D~~~m~L~~~~~~y~v~p 251 (543)
...+++|| |..|.+ | ++.|+.++++..
T Consensus 208 ~~v~~~GD--s~NDi~-m-~~~ag~~vam~N 234 (273)
T PRK00192 208 VETIALGD--SPNDLP-M-LEAADIAVVVPG 234 (273)
T ss_pred ceEEEEcC--ChhhHH-H-HHhCCeeEEeCC
Confidence 35679999 999999 9 699999999954
No 254
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=34.23 E-value=82 Score=33.08 Aligned_cols=16 Identities=13% Similarity=0.511 Sum_probs=13.7
Q ss_pred CeEEEEEcCCccccCC
Q 042170 63 ERTLIFNVEGFLLKSS 78 (543)
Q Consensus 63 ~~~a~FD~DGTLl~~~ 78 (543)
.++++||+||||+...
T Consensus 126 ~kvIvFDLDgTLi~~~ 141 (301)
T TIGR01684 126 PHVVVFDLDSTLITDE 141 (301)
T ss_pred ceEEEEecCCCCcCCC
Confidence 4699999999999773
No 255
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=34.04 E-value=21 Score=34.24 Aligned_cols=31 Identities=35% Similarity=0.550 Sum_probs=17.0
Q ss_pred HHHHHHhCC-cEEEEe--CCcHHHHHHHHHhhCCCc
Q 042170 151 IFEVLKKGG-KTVAVS--NMPQVMIDSFLRDYLDID 183 (543)
Q Consensus 151 a~~~~~~~g-~~v~VS--Asp~~~vepfak~~lG~d 183 (543)
+++.+++.| +..+.| ..|+ ++...++. ++++
T Consensus 53 iL~~L~~~gv~lavASRt~~P~-~A~~~L~~-l~i~ 86 (169)
T PF12689_consen 53 ILQELKERGVKLAVASRTDEPD-WARELLKL-LEID 86 (169)
T ss_dssp HHHHHHHCT--EEEEE--S-HH-HHHHHHHH-TT-C
T ss_pred HHHHHHHCCCEEEEEECCCChH-HHHHHHHh-cCCC
Confidence 345555788 555667 3453 45556775 7887
No 256
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=34.01 E-value=72 Score=27.90 Aligned_cols=69 Identities=23% Similarity=0.232 Sum_probs=40.5
Q ss_pred EEEeCCcHHHHHHHHHhhCC---Cc--EEEeceEEEeCeEEeeeeccCCCcHHHHHHHHHHhc---CCceEEEeCCCCCc
Q 042170 162 VAVSNMPQVMIDSFLRDYLD---ID--LVVGRELKVFCGYFVGLMEDKKKNILVLQEIIKQEN---SGDVIGISSLNSSL 233 (543)
Q Consensus 162 v~VSAsp~~~vepfak~~lG---~d--~VlgTelev~~G~~TG~~~g~~~g~~Kv~~l~~~~~---~~~~~aygD~~S~~ 233 (543)
.=||+||..+-. ++++++. +- -++-+++ ++..++.+....- +.|...|++.+. +..-+=.||| +..
T Consensus 3 ~YvS~SPwnly~-~l~~Fl~~~~~P~G~~~Lr~~---~~~~~~~~~~~~~-~~K~~~i~~i~~~fP~~kfiLIGDs-gq~ 76 (100)
T PF09949_consen 3 FYVSNSPWNLYP-FLRDFLRRNGFPAGPLLLRDY---GPSLSGLFKSGAE-EHKRDNIERILRDFPERKFILIGDS-GQH 76 (100)
T ss_pred EEEcCCHHHHHH-HHHHHHHhcCCCCCceEcccC---CccccccccCCch-hHHHHHHHHHHHHCCCCcEEEEeeC-CCc
Confidence 458999966554 3455543 32 2333332 4556666654332 467777776654 3356789996 667
Q ss_pred chh
Q 042170 234 DHY 236 (543)
Q Consensus 234 D~~ 236 (543)
|.+
T Consensus 77 Dpe 79 (100)
T PF09949_consen 77 DPE 79 (100)
T ss_pred CHH
Confidence 865
No 257
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=33.91 E-value=1.2e+02 Score=37.00 Aligned_cols=99 Identities=10% Similarity=0.005 Sum_probs=59.5
Q ss_pred cCHHHHHHHH---hCC-cEEEEeCCcHHHHHHHHHhhCCCc-E-E---------EeceEEE---e---CeEEeeeecc--
Q 042170 147 VGLEIFEVLK---KGG-KTVAVSNMPQVMIDSFLRDYLDID-L-V---------VGRELKV---F---CGYFVGLMED-- 203 (543)
Q Consensus 147 l~~ea~~~~~---~~g-~~v~VSAsp~~~vepfak~~lG~d-~-V---------lgTelev---~---~G~~TG~~~g-- 203 (543)
+++++-+.++ +.| +++++|.=....+..++++ +|+- . . +..+.+. . .-..||.--.
T Consensus 569 lr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~-~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l 647 (997)
T TIGR01106 569 PRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKG-VGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDM 647 (997)
T ss_pred ChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhhC
Confidence 5767665555 788 8889998888888999997 7872 0 0 0000000 0 0123332111
Q ss_pred ------------C--CC---c-HHHHHHHHHHhcCCc-eEEEeCCCCCcchhcccccccCceeecc
Q 042170 204 ------------K--KK---N-ILVLQEIIKQENSGD-VIGISSLNSSLDHYKLFLQQCNEVYLVR 250 (543)
Q Consensus 204 ------------~--~~---g-~~Kv~~l~~~~~~~~-~~aygD~~S~~D~~~m~L~~~~~~y~v~ 250 (543)
. -+ . +.|.+-++.+-...+ ....|| +..|.| + |+.|+-..++.
T Consensus 648 ~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GD--G~ND~p-a-Lk~AdVGiamg 709 (997)
T TIGR01106 648 TSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGD--GVNDSP-A-LKKADIGVAMG 709 (997)
T ss_pred CHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECC--CcccHH-H-HhhCCcceecC
Confidence 0 01 1 466665555533323 347899 999999 9 89999999874
No 258
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=33.48 E-value=37 Score=33.78 Aligned_cols=13 Identities=15% Similarity=0.309 Sum_probs=11.2
Q ss_pred eEEEEEcCCcccc
Q 042170 64 RTLIFNVEGFLLK 76 (543)
Q Consensus 64 ~~a~FD~DGTLl~ 76 (543)
-+++.|+||||+.
T Consensus 2 ~li~tDlDGTLl~ 14 (249)
T TIGR01485 2 LLLVSDLDNTLVD 14 (249)
T ss_pred eEEEEcCCCcCcC
Confidence 3678999999996
No 259
>KOG3088 consensus Secretory carrier membrane protein [Intracellular trafficking, secretion, and vesicular transport]
Probab=33.32 E-value=95 Score=32.37 Aligned_cols=25 Identities=16% Similarity=0.191 Sum_probs=20.5
Q ss_pred CcccCCcccccCCCCCCeeeeCCCc
Q 042170 252 TDKRSWQHLSRDKYPKPLIFHDGRL 276 (543)
Q Consensus 252 ~~~~~w~~l~~~~~~~plifhdgr~ 276 (543)
.++++||+||..=.-+|++.||=-.
T Consensus 97 ~~~nNWPPLP~~~pv~PcfyqD~s~ 121 (313)
T KOG3088|consen 97 IRENNWPPLPSFIPVFPCFYQDISN 121 (313)
T ss_pred ccccCCCCCCCCCCccccccccccc
Confidence 3457999999888889999999553
No 260
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=32.82 E-value=2.7e+02 Score=26.01 Aligned_cols=15 Identities=7% Similarity=0.341 Sum_probs=12.9
Q ss_pred CeEEEEEcCCccccC
Q 042170 63 ERTLIFNVEGFLLKS 77 (543)
Q Consensus 63 ~~~a~FD~DGTLl~~ 77 (543)
.++++||.||||...
T Consensus 3 ~~~~~~d~~~t~~~~ 17 (181)
T PRK08942 3 MKAIFLDRDGVINVD 17 (181)
T ss_pred ccEEEEECCCCcccC
Confidence 478999999998766
No 261
>PF03982 DAGAT: Diacylglycerol acyltransferase ; InterPro: IPR007130 The terminal step of triacylglycerol (TAG) formation is catalysed by the enzyme diacylglycerol acyltransferase (DAGAT) [, ].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups
Probab=32.60 E-value=71 Score=33.41 Aligned_cols=125 Identities=20% Similarity=0.266 Sum_probs=69.0
Q ss_pred hhhhhhhhcCceeEeecCchHHHHHHHHHHhC---CC-eEEecCccc----c-CCCccccc--chhhhhcC----CceEE
Q 042170 380 SRMSEILAPIKTVRMTRNRDQDAKLVKSLLNQ---GD-LVICPEGTT----C-REPYLLRF--SPLFAEMS----DNIIP 444 (543)
Q Consensus 380 ~~v~~~l~~i~tv~v~R~r~~~~~~~~~~L~~---G~-l~iFPEGTt----t-~g~~Ll~F--~~~fa~l~----~pV~P 444 (543)
.-+.+++.++|.+.++|+ .++..|++ |. ++|+|-|.. + .+..-+-. +++|..++ .+|+|
T Consensus 111 P~~R~~~~~~G~~~~sr~------s~~~~L~~~~~G~~v~ivpGG~~E~l~~~p~~~~l~lk~RkGFvklAl~~Ga~LVP 184 (297)
T PF03982_consen 111 PFFRDFLLWLGAVSASRE------SIRYLLSRGGSGNAVVIVPGGAAEALLAHPGRERLYLKNRKGFVKLALQHGAPLVP 184 (297)
T ss_pred cccchhhhhccccccccc------ccceeecccCCCceeeeccCcHHHHhhcCCCceEEEECCcchHHHhHHHcCCcEEe
Confidence 334566666676666553 33445655 43 899999874 2 33343333 45776554 59999
Q ss_pred EEEEecccccccccc-CCcc------cc------c--chhc--cc-------CCCCe-EEEEEcccccCCcccCCCCCCH
Q 042170 445 VASNSHVTMFYGTTA-GGLK------CL------D--PFFF--LM-------NPSPG-YTMQLLEGVSGLSMCQDGNESR 499 (543)
Q Consensus 445 VaI~~~~~~~~gt~~-~~~~------~~------d--~~~~--l~-------~P~~~-v~V~fL~pi~~~~~~~~~~~~~ 499 (543)
|---+...++.-... .+++ |+ . .+|- ++ .|++. +++.+++||+.+.. ++.+.
T Consensus 185 v~~FGE~d~~~~~~~~~~~~~r~~q~~~~~~~g~~~~~f~Grg~f~~~~~gllP~r~pi~~VVG~PI~v~~~---~~Pt~ 261 (297)
T PF03982_consen 185 VYSFGENDLYDQVQNPPGSWLRRFQRWLKKKFGFSLPLFWGRGIFPSYSFGLLPYRRPITTVVGKPIPVPKI---ENPTQ 261 (297)
T ss_pred EEEeCChhheeeccCCchhHHHHHHHHHHHHcCcceeeeecccccCCCcccccccCCceEEEeeceecccCC---CCcCH
Confidence 999888776542110 1111 00 0 1111 11 35544 99999999998543 35566
Q ss_pred HHHHHHHHHHHHHHh
Q 042170 500 FDVANYVQSELGKAL 514 (543)
Q Consensus 500 ~elA~~vq~~Ia~~L 514 (543)
+++. +++++--++|
T Consensus 262 e~Vd-~~H~~Y~~~L 275 (297)
T PF03982_consen 262 EDVD-KLHARYIEAL 275 (297)
T ss_pred HHHH-HHHHHHHHHH
Confidence 6644 4444444443
No 262
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=31.08 E-value=26 Score=36.14 Aligned_cols=21 Identities=19% Similarity=0.520 Sum_probs=18.9
Q ss_pred CeEEEEEcCCccccCCCchHH
Q 042170 63 ERTLIFNVEGFLLKSSSLFPY 83 (543)
Q Consensus 63 ~~~a~FD~DGTLl~~~s~fp~ 83 (543)
-+..+||+||||.++...+|.
T Consensus 8 y~~~l~DlDGvl~~G~~~ipg 28 (269)
T COG0647 8 YDGFLFDLDGVLYRGNEAIPG 28 (269)
T ss_pred cCEEEEcCcCceEeCCccCch
Confidence 357899999999999999996
No 263
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=30.90 E-value=31 Score=31.70 Aligned_cols=16 Identities=25% Similarity=0.611 Sum_probs=14.2
Q ss_pred CeEEEEEcCCccccCC
Q 042170 63 ERTLIFNVEGFLLKSS 78 (543)
Q Consensus 63 ~~~a~FD~DGTLl~~~ 78 (543)
+..+++|+||||+.+.
T Consensus 2 k~~lvldld~tl~~~~ 17 (148)
T smart00577 2 KKTLVLDLDETLVHST 17 (148)
T ss_pred CcEEEEeCCCCeECCC
Confidence 5689999999999884
No 264
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=30.72 E-value=32 Score=32.77 Aligned_cols=14 Identities=36% Similarity=0.752 Sum_probs=11.8
Q ss_pred EEEEEcCCccccCC
Q 042170 65 TLIFNVEGFLLKSS 78 (543)
Q Consensus 65 ~a~FD~DGTLl~~~ 78 (543)
+.+||+||||+..+
T Consensus 1 li~~D~DgTL~~~~ 14 (204)
T TIGR01484 1 LLFFDLDGTLLDPN 14 (204)
T ss_pred CEEEeCcCCCcCCC
Confidence 36899999999765
No 265
>PLN03017 trehalose-phosphatase
Probab=30.64 E-value=30 Score=37.27 Aligned_cols=16 Identities=13% Similarity=0.283 Sum_probs=13.0
Q ss_pred CCcCeEEEEEcCCccc
Q 042170 60 QVSERTLIFNVEGFLL 75 (543)
Q Consensus 60 ~~~~~~a~FD~DGTLl 75 (543)
...+.+.++|+||||+
T Consensus 108 ~~k~~llflD~DGTL~ 123 (366)
T PLN03017 108 RGKQIVMFLDYDGTLS 123 (366)
T ss_pred cCCCeEEEEecCCcCc
Confidence 3445788899999999
No 266
>PF15202 Adipogenin: Adipogenin
Probab=30.26 E-value=87 Score=25.61 Aligned_cols=22 Identities=18% Similarity=0.537 Sum_probs=14.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 042170 283 SDCLAMFMWFPFGLVVAIIRSF 304 (543)
Q Consensus 283 ~~~l~~~~~lp~gl~l~~~r~~ 304 (543)
...+.+++.+|+|+++.++.+.
T Consensus 14 fsflvfwlclpv~lllfl~ivw 35 (81)
T PF15202_consen 14 FSFLVFWLCLPVGLLLFLLIVW 35 (81)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3455566668999987765443
No 267
>PLN02580 trehalose-phosphatase
Probab=27.87 E-value=34 Score=37.08 Aligned_cols=56 Identities=18% Similarity=-0.053 Sum_probs=32.3
Q ss_pred EEEeCeEEeeeecc-CCCcHHHHHHHHHHh---cCC-c----eEEEeCCCCCcchhcccccc-----cCceeeccC
Q 042170 190 LKVFCGYFVGLMED-KKKNILVLQEIIKQE---NSG-D----VIGISSLNSSLDHYKLFLQQ-----CNEVYLVRS 251 (543)
Q Consensus 190 lev~~G~~TG~~~g-~~~g~~Kv~~l~~~~---~~~-~----~~aygD~~S~~D~~~m~L~~-----~~~~y~v~p 251 (543)
+++..|+..=.+.. .++ .|-.+++.+. +-. . .+.+|| ..+|.+ || +. ++..+.|..
T Consensus 283 l~v~~Gk~vlEVrP~~g~--~KG~Av~~Ll~~~g~~~~d~~~pi~iGD--D~TDed-mF-~~L~~~~~G~~I~Vgn 352 (384)
T PLN02580 283 LRLTHGRKVLEVRPVIDW--NKGKAVEFLLESLGLSNCDDVLPIYIGD--DRTDED-AF-KVLREGNRGYGILVSS 352 (384)
T ss_pred eEEEeCCeEEEEecCCCC--CHHHHHHHHHHhcCCCcccceeEEEECC--CchHHH-HH-HhhhccCCceEEEEec
Confidence 55555554434433 233 3555555444 321 1 268999 999999 95 86 466677653
No 268
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=27.36 E-value=52 Score=39.75 Aligned_cols=98 Identities=15% Similarity=0.141 Sum_probs=62.5
Q ss_pred cCHHHHHHHH---hCC-cEEEEeCCcHHHHHHHHHhhCCCc--E---EE--eceEEEe-CeEEeeeeccCC-C----cHH
Q 042170 147 VGLEIFEVLK---KGG-KTVAVSNMPQVMIDSFLRDYLDID--L---VV--GRELKVF-CGYFVGLMEDKK-K----NIL 209 (543)
Q Consensus 147 l~~ea~~~~~---~~g-~~v~VSAsp~~~vepfak~~lG~d--~---Vl--gTelev~-~G~~TG~~~g~~-~----g~~ 209 (543)
.++++-+.++ ++| +++++|.==..-+...+++ +|+. . .+ |.|+... +..+.-.++... | -++
T Consensus 548 pr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~-~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP~q 626 (917)
T COG0474 548 PREDVKEAIEELREAGIKVWMITGDHVETAIAIAKE-CGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSPEQ 626 (917)
T ss_pred CCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHH-cCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCHHH
Confidence 6666665555 788 9999998888888999998 8853 1 12 5555432 221111111111 1 157
Q ss_pred HHHHHHHHhcCCceE-EEeCCCCCcchhcccccccCceeec
Q 042170 210 VLQEIIKQENSGDVI-GISSLNSSLDHYKLFLQQCNEVYLV 249 (543)
Q Consensus 210 Kv~~l~~~~~~~~~~-aygD~~S~~D~~~m~L~~~~~~y~v 249 (543)
|.+-++.+-+..+.+ .-|| +-.|.| + |+.|+-....
T Consensus 627 K~~IV~~lq~~g~vVamtGD--GvNDap-A-Lk~ADVGIam 663 (917)
T COG0474 627 KARIVEALQKSGHVVAMTGD--GVNDAP-A-LKAADVGIAM 663 (917)
T ss_pred HHHHHHHHHhCCCEEEEeCC--CchhHH-H-HHhcCccEEe
Confidence 777666664444444 6699 999999 9 8999888843
No 269
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=27.04 E-value=66 Score=32.33 Aligned_cols=70 Identities=16% Similarity=0.085 Sum_probs=40.7
Q ss_pred HHHHHHHhhCCCc-EEEeceEEEeCeEEeeeeccCCCcHHHHHHHHH---HhcCC--ceEEEeCCCCCcchhcccccccC
Q 042170 171 MIDSFLRDYLDID-LVVGRELKVFCGYFVGLMEDKKKNILVLQEIIK---QENSG--DVIGISSLNSSLDHYKLFLQQCN 244 (543)
Q Consensus 171 ~vepfak~~lG~d-~VlgTelev~~G~~TG~~~g~~~g~~Kv~~l~~---~~~~~--~~~aygD~~S~~D~~~m~L~~~~ 244 (543)
.++..+++ .|++ .++ ..+|++-=.+- .+++ |-.+++- .++-. ..++.|| |-.|.+ | |..+.
T Consensus 135 ~i~~~l~~-~~l~~~~i-----~s~~~~ldilP-~~a~--K~~Al~~L~~~~~~~~~~vl~aGD--SgND~~-m-L~~~~ 201 (247)
T PF05116_consen 135 EIRARLRQ-RGLRVNVI-----YSNGRDLDILP-KGAS--KGAALRYLMERWGIPPEQVLVAGD--SGNDLE-M-LEGGD 201 (247)
T ss_dssp HHHHHHHC-CTCEEEEE-----ECTCCEEEEEE-TT-S--HHHHHHHHHHHHT--GGGEEEEES--SGGGHH-H-HCCSS
T ss_pred HHHHHHHH-cCCCeeEE-----EccceeEEEcc-CCCC--HHHHHHHHHHHhCCCHHHEEEEeC--CCCcHH-H-HcCcC
Confidence 45555554 5655 233 33565543332 2333 5555554 44422 6789999 889999 9 69999
Q ss_pred ceeeccCCc
Q 042170 245 EVYLVRSTD 253 (543)
Q Consensus 245 ~~y~v~p~~ 253 (543)
++++|.++.
T Consensus 202 ~~vvV~Na~ 210 (247)
T PF05116_consen 202 HGVVVGNAQ 210 (247)
T ss_dssp EEEE-TTS-
T ss_pred CEEEEcCCC
Confidence 999997544
No 270
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=26.96 E-value=38 Score=31.82 Aligned_cols=17 Identities=24% Similarity=0.520 Sum_probs=0.0
Q ss_pred CeEEEEEcCCccccCCC
Q 042170 63 ERTLIFNVEGFLLKSSS 79 (543)
Q Consensus 63 ~~~a~FD~DGTLl~~~s 79 (543)
++++++|+|+||+.+..
T Consensus 1 k~~lvlDLDeTLi~~~~ 17 (162)
T TIGR02251 1 KKTLVLDLDETLVHSTF 17 (162)
T ss_pred CcEEEEcCCCCcCCCCC
No 271
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=26.65 E-value=89 Score=31.79 Aligned_cols=92 Identities=11% Similarity=0.091 Sum_probs=54.3
Q ss_pred cCHHHHHHHH---hCC-cEEEEeCCcHHHHHHHHHhhCCCcE-----EEeceEEEeCeEEe-eeeccCCCcHHHHHHHHH
Q 042170 147 VGLEIFEVLK---KGG-KTVAVSNMPQVMIDSFLRDYLDIDL-----VVGRELKVFCGYFV-GLMEDKKKNILVLQEIIK 216 (543)
Q Consensus 147 l~~ea~~~~~---~~g-~~v~VSAsp~~~vepfak~~lG~d~-----VlgTelev~~G~~T-G~~~g~~~g~~Kv~~l~~ 216 (543)
+.+++.+.++ +.| +++++|+.++.+.+..++. +|.+. ++|.+. ...|- ..-.++.-..-+.+.+++
T Consensus 188 ~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~-l~~~~~~f~~i~~~~~---~~~~~~~~~~~kp~p~~~~~~l~~ 263 (300)
T PHA02530 188 PNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEW-LRQTDIWFDDLIGRPP---DMHFQREQGDKRPDDVVKEEIFWE 263 (300)
T ss_pred CChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHH-HHHcCCchhhhhCCcc---hhhhcccCCCCCCcHHHHHHHHHH
Confidence 5666666555 567 7888999999999988874 66543 334331 00000 000111113566777776
Q ss_pred HhcC--CceEEEeCCCCCcchhcccccccCce
Q 042170 217 QENS--GDVIGISSLNSSLDHYKLFLQQCNEV 246 (543)
Q Consensus 217 ~~~~--~~~~aygD~~S~~D~~~m~L~~~~~~ 246 (543)
+... +..+.+|| +..|.. . -.-+|-+
T Consensus 264 ~~~~~~~~~~~vgD--~~~d~~-~-a~~~Gi~ 291 (300)
T PHA02530 264 KIAPKYDVLLAVDD--RDQVVD-M-WRRIGLE 291 (300)
T ss_pred HhccCceEEEEEcC--cHHHHH-H-HHHhCCe
Confidence 5442 26779999 888887 6 3555544
No 272
>PLN02151 trehalose-phosphatase
Probab=26.65 E-value=38 Score=36.30 Aligned_cols=15 Identities=13% Similarity=0.268 Sum_probs=12.4
Q ss_pred CcCeEEEEEcCCccc
Q 042170 61 VSERTLIFNVEGFLL 75 (543)
Q Consensus 61 ~~~~~a~FD~DGTLl 75 (543)
..+.+.++|+||||+
T Consensus 96 ~~~~ll~lDyDGTL~ 110 (354)
T PLN02151 96 GKQIVMFLDYDGTLS 110 (354)
T ss_pred CCceEEEEecCccCC
Confidence 345688899999999
No 273
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=26.24 E-value=39 Score=33.51 Aligned_cols=21 Identities=29% Similarity=0.477 Sum_probs=16.0
Q ss_pred CeEEEEEcCCccccCC-CchHH
Q 042170 63 ERTLIFNVEGFLLKSS-SLFPY 83 (543)
Q Consensus 63 ~~~a~FD~DGTLl~~~-s~fp~ 83 (543)
+.++.||+|||||... +..|-
T Consensus 11 ~~l~lfdvdgtLt~~r~~~~~e 32 (252)
T KOG3189|consen 11 ETLCLFDVDGTLTPPRQKVTPE 32 (252)
T ss_pred ceEEEEecCCccccccccCCHH
Confidence 5689999999999665 34554
No 274
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=25.11 E-value=3.6e+02 Score=25.30 Aligned_cols=33 Identities=27% Similarity=0.484 Sum_probs=23.3
Q ss_pred HHHHHHHhCC-cEEEEeCCcHH------------HHHHHHHhhCCCc
Q 042170 150 EIFEVLKKGG-KTVAVSNMPQV------------MIDSFLRDYLDID 183 (543)
Q Consensus 150 ea~~~~~~~g-~~v~VSAsp~~------------~vepfak~~lG~d 183 (543)
|+++.+++.| +++++|+.+.. .++.+++. +|++
T Consensus 49 e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~-~gl~ 94 (166)
T TIGR01664 49 AKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEK-LKVP 94 (166)
T ss_pred HHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHH-cCCC
Confidence 3445555778 88899987764 56778875 8875
No 275
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=23.97 E-value=1.4e+02 Score=28.80 Aligned_cols=30 Identities=10% Similarity=0.286 Sum_probs=23.9
Q ss_pred HHHHhCC-cEEEEeCCcHHHHHHHHHhhCCCc
Q 042170 153 EVLKKGG-KTVAVSNMPQVMIDSFLRDYLDID 183 (543)
Q Consensus 153 ~~~~~~g-~~v~VSAsp~~~vepfak~~lG~d 183 (543)
+.+++.| .++++|+=|...+++++++ +|.+
T Consensus 26 ~~l~~~gi~~~i~TgR~~~~~~~~~~~-l~~~ 56 (221)
T TIGR02463 26 TRLQEAGIPVILCTSKTAAEVEYLQKA-LGLT 56 (221)
T ss_pred HHHHHCCCeEEEEcCCCHHHHHHHHHH-cCCC
Confidence 3345667 8889999999999999986 8876
No 276
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=23.61 E-value=43 Score=32.17 Aligned_cols=14 Identities=29% Similarity=0.769 Sum_probs=12.3
Q ss_pred eEEEEEcCCccccC
Q 042170 64 RTLIFNVEGFLLKS 77 (543)
Q Consensus 64 ~~a~FD~DGTLl~~ 77 (543)
++++||+|+|+...
T Consensus 3 ~~~~~~~~~~~~~~ 16 (174)
T TIGR01685 3 RVIVFDLDGTLWDH 16 (174)
T ss_pred cEEEEeCCCCCcCc
Confidence 58999999999865
No 277
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=23.59 E-value=54 Score=33.99 Aligned_cols=20 Identities=40% Similarity=0.881 Sum_probs=16.3
Q ss_pred cCeEEEEEcCCccccCCCchHHH
Q 042170 62 SERTLIFNVEGFLLKSSSLFPYF 84 (543)
Q Consensus 62 ~~~~a~FD~DGTLl~~~s~fp~f 84 (543)
.+.+.+||+|.|++ |..||+
T Consensus 100 ~~dA~V~DIDET~L---sN~pY~ 119 (275)
T TIGR01680 100 EKDTFLFNIDGTAL---SNIPYY 119 (275)
T ss_pred CCCEEEEECccccc---cCHHHH
Confidence 35799999999999 567774
No 278
>PLN02423 phosphomannomutase
Probab=22.94 E-value=40 Score=33.86 Aligned_cols=42 Identities=10% Similarity=-0.083 Sum_probs=30.3
Q ss_pred cHHHHHHHHHHhcCCceEEEeCCC--CCcchhcccccc-cCceeecc
Q 042170 207 NILVLQEIIKQENSGDVIGISSLN--SSLDHYKLFLQQ-CNEVYLVR 250 (543)
Q Consensus 207 g~~Kv~~l~~~~~~~~~~aygD~~--S~~D~~~m~L~~-~~~~y~v~ 250 (543)
|-.|..+|+.+...+..+|+||.. +..|++ | |+. +-....|.
T Consensus 187 gvnKg~al~~L~~~~e~~aFGD~~~~~~ND~e-M-l~~~~~~~~~~~ 231 (245)
T PLN02423 187 GWDKTYCLQFLEDFDEIHFFGDKTYEGGNDHE-I-FESERTIGHTVT 231 (245)
T ss_pred CCCHHHHHHHhcCcCeEEEEeccCCCCCCcHH-H-HhCCCcceEEeC
Confidence 456999999998322678999910 278999 9 786 66666664
No 279
>PF00795 CN_hydrolase: Carbon-nitrogen hydrolase The Prosite family is specific to nitrilases The Prosite family is specific to UPF0012; InterPro: IPR003010 This family contains nitrilases that break carbon-nitrogen bonds and appear to be involved in the reduction of organic nitrogen compounds and ammonia production []. They all have distinct substrate specificity and include cyanide hydratases, aliphatic amidases, beta-alanine synthase, and a few other proteins with unknown molecular function. Sequence conservation over the entire length, as well as the similarity in the reactions catalyzed by the known enzymes in this family, points to a common catalytic mechanism. They have an invariant cysteine that is part of the catalytic site in nitrilases. Another highly conserved motif includes an invariant glutamic acid that might also be involved in catalysis [].; GO: 0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, 0006807 nitrogen compound metabolic process; PDB: 2E2L_D 2E2K_D 2DYV_A 2DYU_B 3KLC_B 3IW3_A 3KI8_A 3IVZ_A 1EMS_A 2GGK_B ....
Probab=22.45 E-value=86 Score=29.17 Aligned_cols=22 Identities=36% Similarity=0.502 Sum_probs=15.9
Q ss_pred HHHHHHHhCC-CeEEecCccccC
Q 042170 403 KLVKSLLNQG-DLVICPEGTTCR 424 (543)
Q Consensus 403 ~~~~~~L~~G-~l~iFPEGTtt~ 424 (543)
+.++++.++| +|++|||...+.
T Consensus 25 ~~~~~a~~~~~dlvv~PE~~~~~ 47 (186)
T PF00795_consen 25 SLIEEAARQGADLVVFPEMALPG 47 (186)
T ss_dssp HHHHHHHHTTESEEEEETTTTTC
T ss_pred HHHHHHHHCCCCEEEcCcchhcc
Confidence 3345566778 799999987763
No 280
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=22.06 E-value=58 Score=30.53 Aligned_cols=18 Identities=11% Similarity=0.370 Sum_probs=0.0
Q ss_pred CCcCeEEEEEcCCccccC
Q 042170 60 QVSERTLIFNVEGFLLKS 77 (543)
Q Consensus 60 ~~~~~~a~FD~DGTLl~~ 77 (543)
..++.+.++|+|.||+++
T Consensus 3 ~~~kl~LVLDLDeTLihs 20 (156)
T TIGR02250 3 REKKLHLVLDLDQTLIHT 20 (156)
T ss_pred cCCceEEEEeCCCCcccc
No 281
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=21.88 E-value=51 Score=31.06 Aligned_cols=23 Identities=13% Similarity=0.359 Sum_probs=17.3
Q ss_pred CcCeEEEEEcCCccccCCC--chHH
Q 042170 61 VSERTLIFNVEGFLLKSSS--LFPY 83 (543)
Q Consensus 61 ~~~~~a~FD~DGTLl~~~s--~fp~ 83 (543)
..-+++++|+||||+..++ .||.
T Consensus 23 ~~v~~vv~D~Dgtl~~~~~~~~~pg 47 (170)
T TIGR01668 23 VGIKGVVLDKDNTLVYPDHNEAYPA 47 (170)
T ss_pred CCCCEEEEecCCccccCCCCCcChh
Confidence 3457999999999997655 4543
No 282
>TIGR03703 plsB glycerol-3-phosphate O-acyltransferase. Members of this protein family are PlsB, glycerol-3-phosphate O-acyltransferase, present in E. coli and numerous related species. In many bacteria, PlsB is not found, and appears to be replaced by a two enzyme system for 1-acyl-glycerol-3-phosphate biosynthesis, the PlsX/Y system.
Probab=21.55 E-value=3.1e+02 Score=32.83 Aligned_cols=143 Identities=18% Similarity=0.151 Sum_probs=73.2
Q ss_pred cCCCceEEEecCCCCCcHHHHHHh-----hcCceeEEeeehhhhhhhhhcCceeEeecCchHHHHHHHHHHhCCCeEEec
Q 042170 344 QKTERTLYVCNHRTLLDPLYLSFA-----LKKNLTAVTYSLSRMSEILAPIKTVRMTRNRDQDAKLVKSLLNQGDLVICP 418 (543)
Q Consensus 344 ~~~~~~l~VaNH~S~LD~~vl~a~-----l~~~~~~va~sl~~v~~~l~~i~tv~v~R~r~~~~~~~~~~L~~G~l~iFP 418 (543)
+.++|++||--+.|..|.+++-.. +|.|..-+.. .+. ..-..+|++... . +|.
T Consensus 26 ~~~~p~~yvl~~~s~~d~~~l~~~~~~~~lp~p~~~~~~-----~~~-~~~~~~~l~~~~--------------~--~~~ 83 (799)
T TIGR03703 26 DPERPIVYVLPTRSLSDLLALQKACRKLGLPDPLEPLVI-----GGQ-RLPRYVFLDRPP--------------P--LFS 83 (799)
T ss_pred CCCCCEEEEeCCCchhhHHHHHHHHHHcCCcCCCcccCC-----CCc-ccceEEEEeCCC--------------c--ccc
Confidence 347899999999999999999887 2333221110 111 111344554321 0 121
Q ss_pred Ccccc-CCCcccccchhhhhcC------CceEEEEEEeccccccccccCCcc-----------cccchhc-ccCCCCeEE
Q 042170 419 EGTTC-REPYLLRFSPLFAEMS------DNIIPVASNSHVTMFYGTTAGGLK-----------CLDPFFF-LMNPSPGYT 479 (543)
Q Consensus 419 EGTtt-~g~~Ll~F~~~fa~l~------~pV~PVaI~~~~~~~~gt~~~~~~-----------~~d~~~~-l~~P~~~v~ 479 (543)
-.. +....-.|+.+..... ..|+||.|-..+. +|-....++ +..-++. +.+++. ..
T Consensus 84 --~~~~~~~~~~~~~~l~~~~~~~~~~di~lvPv~v~wgr~--p~ke~~~~~~l~~~~~~~~~~~~k~~~~~~~gr~-~~ 158 (799)
T TIGR03703 84 --DRQKKSTSLPLLHRLLELHREDPELDVQLVPVSVFWGRA--PGKESSGWKLLFLDSWASPGRLRKFLIVLFLGRD-NF 158 (799)
T ss_pred --ccCCcccchHHHHHHHHHHHhCCCCCceEEeEEEEecCC--CcccccHHHHhhcCCcCCCchHhhhhheeEcCcc-cE
Confidence 111 2223444555443321 2699999966543 111100000 1111222 334554 88
Q ss_pred EEEcccccCCcccCCCCCCHHHHHHHHHHHHHHHh
Q 042170 480 MQLLEGVSGLSMCQDGNESRFDVANYVQSELGKAL 514 (543)
Q Consensus 480 V~fL~pi~~~~~~~~~~~~~~elA~~vq~~Ia~~L 514 (543)
|+|.+|++-..... +..+.+.+|..+++...-++
T Consensus 159 v~~~~p~sl~~~~~-~~~~~~~~a~kl~r~a~~~~ 192 (799)
T TIGR03703 159 VRFSPPVSLRYMAD-EHGTDESIAHKLARVARVHF 192 (799)
T ss_pred EEecCCccHHHHHh-hcCChHHHHHHHHHHHHHHH
Confidence 99999998644322 34566677776666655544
No 283
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=21.10 E-value=55 Score=32.50 Aligned_cols=20 Identities=10% Similarity=0.459 Sum_probs=16.7
Q ss_pred eEEEEEcCCccccCCCchHH
Q 042170 64 RTLIFNVEGFLLKSSSLFPY 83 (543)
Q Consensus 64 ~~a~FD~DGTLl~~~s~fp~ 83 (543)
+.++||+||||......||-
T Consensus 9 ~~~~~D~dG~l~~~~~~~pg 28 (242)
T TIGR01459 9 DVFLLDLWGVIIDGNHTYPG 28 (242)
T ss_pred CEEEEecccccccCCccCcc
Confidence 58899999999988777664
No 284
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=20.94 E-value=1.9e+02 Score=30.50 Aligned_cols=17 Identities=12% Similarity=0.505 Sum_probs=14.5
Q ss_pred CeEEEEEcCCccccCCC
Q 042170 63 ERTLIFNVEGFLLKSSS 79 (543)
Q Consensus 63 ~~~a~FD~DGTLl~~~s 79 (543)
.++.+||+||||+....
T Consensus 128 ~~~i~~D~D~TL~~~~~ 144 (303)
T PHA03398 128 PHVIVFDLDSTLITDEE 144 (303)
T ss_pred ccEEEEecCCCccCCCC
Confidence 47999999999998743
No 285
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=20.88 E-value=1.7e+02 Score=28.89 Aligned_cols=31 Identities=26% Similarity=0.357 Sum_probs=23.6
Q ss_pred HHHHHhCC-cEEEEeCCcHHHHHHHHHhhCCCc
Q 042170 152 FEVLKKGG-KTVAVSNMPQVMIDSFLRDYLDID 183 (543)
Q Consensus 152 ~~~~~~~g-~~v~VSAsp~~~vepfak~~lG~d 183 (543)
++.+++.| .++++|+-+...+++++++ +|++
T Consensus 24 i~~l~~~G~~~vi~TgR~~~~~~~~~~~-lg~~ 55 (225)
T TIGR02461 24 LEELKDLGFPIVFVSSKTRAEQEYYREE-LGVE 55 (225)
T ss_pred HHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCCC
Confidence 34455567 7788898888888999887 8975
No 286
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=20.81 E-value=1.2e+02 Score=30.00 Aligned_cols=32 Identities=25% Similarity=0.362 Sum_probs=22.9
Q ss_pred HHHHHHhCC-cEEEEeCCcHHHHH--HHHHhhCCCc
Q 042170 151 IFEVLKKGG-KTVAVSNMPQVMID--SFLRDYLDID 183 (543)
Q Consensus 151 a~~~~~~~g-~~v~VSAsp~~~ve--pfak~~lG~d 183 (543)
+++.+++.| +++++|.+++-..+ ..+++ +|++
T Consensus 32 ~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~-~gl~ 66 (242)
T TIGR01459 32 NLNKIIAQGKPVYFVSNSPRNIFSLHKTLKS-LGIN 66 (242)
T ss_pred HHHHHHHCCCEEEEEeCCCCChHHHHHHHHH-CCCC
Confidence 344555778 77889988887766 66765 7876
No 287
>KOG3128 consensus Uncharacterized conserved protein [Function unknown]
Probab=20.42 E-value=1.6e+02 Score=30.44 Aligned_cols=85 Identities=15% Similarity=0.057 Sum_probs=54.2
Q ss_pred HHHHHHhCC-cEEEEeCCcHHHHHHHHHhhCCCc---EEEeceEEEe-CeEEe---eeeccCCCcHHHHHHH-HHHh---
Q 042170 151 IFEVLKKGG-KTVAVSNMPQVMIDSFLRDYLDID---LVVGRELKVF-CGYFV---GLMEDKKKNILVLQEI-IKQE--- 218 (543)
Q Consensus 151 a~~~~~~~g-~~v~VSAsp~~~vepfak~~lG~d---~VlgTelev~-~G~~T---G~~~g~~~g~~Kv~~l-~~~~--- 218 (543)
-++.+++.+ .+++.||..-..+|-+.++-.+.- .+++.-++.. +|.+. +.+...-|-..++-.. -+.+
T Consensus 146 ff~~L~~~~IP~~iFSAGigdiiEev~~q~~~~~pn~k~vSN~~~F~edg~l~gF~~~Lihtfnkn~~v~~~~s~yf~~~ 225 (298)
T KOG3128|consen 146 FFEALQAHEIPLLIFSAGIGDIIEEVTRQKLVLHPNVKFVSNYMDFDEDGNLCGFSQPLIHTFNKNSSVLQNESEYFHQL 225 (298)
T ss_pred HHHHHHhCCCceEEEecchHHHHHHHHHHHhccCccHHhhhhhhhhcccchhhhhhHHHHHHHccchHHHHhhhHHHhhc
Confidence 345666667 888899999999999998865543 6777777774 66633 3333222212233222 2333
Q ss_pred cCC-ceEEEeCCCCCcchhcc
Q 042170 219 NSG-DVIGISSLNSSLDHYKL 238 (543)
Q Consensus 219 ~~~-~~~aygD~~S~~D~~~m 238 (543)
.++ ..+-.|| |.+|+. |
T Consensus 226 ~~~~nVillGd--sigdl~-m 243 (298)
T KOG3128|consen 226 AGRVNVILLGD--SIGDLH-M 243 (298)
T ss_pred cCCceEEEecc--ccccch-h
Confidence 233 5678999 999998 7
No 288
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=20.19 E-value=61 Score=31.10 Aligned_cols=16 Identities=25% Similarity=0.368 Sum_probs=13.4
Q ss_pred CeEEEEEcCCccccCC
Q 042170 63 ERTLIFNVEGFLLKSS 78 (543)
Q Consensus 63 ~~~a~FD~DGTLl~~~ 78 (543)
=+..+||+|+||+...
T Consensus 41 ik~li~DkDNTL~~~~ 56 (168)
T PF09419_consen 41 IKALIFDKDNTLTPPY 56 (168)
T ss_pred ceEEEEcCCCCCCCCC
Confidence 4799999999999553
No 289
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=20.11 E-value=55 Score=38.30 Aligned_cols=32 Identities=16% Similarity=0.198 Sum_probs=22.4
Q ss_pred HHHHHHHHHhcCC---ceEEEeCCCCCcchhcccccccC
Q 042170 209 LVLQEIIKQENSG---DVIGISSLNSSLDHYKLFLQQCN 244 (543)
Q Consensus 209 ~Kv~~l~~~~~~~---~~~aygD~~S~~D~~~m~L~~~~ 244 (543)
.|-.+++...... ..+++|| +.+|.+ || +.++
T Consensus 657 nKG~al~~ll~~~~~d~vl~~GD--~~nDe~-Mf-~~~~ 691 (726)
T PRK14501 657 NKGRAVRRLLEAGPYDFVLAIGD--DTTDED-MF-RALP 691 (726)
T ss_pred CHHHHHHHHHhcCCCCEEEEECC--CCChHH-HH-Hhcc
Confidence 3666666665422 4569999 999999 94 8764
Done!