Query 042171
Match_columns 125
No_of_seqs 146 out of 1398
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 05:33:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042171.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042171hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dr5_A Putative O-methyltransf 99.9 5.6E-24 1.9E-28 155.5 12.9 114 7-125 59-209 (221)
2 3r3h_A O-methyltransferase, SA 99.9 9E-23 3.1E-27 150.8 14.1 121 4-125 60-216 (242)
3 3c3y_A Pfomt, O-methyltransfer 99.9 6.5E-22 2.2E-26 145.4 13.3 123 3-125 69-232 (237)
4 1sui_A Caffeoyl-COA O-methyltr 99.9 6.3E-21 2.2E-25 141.2 13.6 123 3-125 78-242 (247)
5 3cbg_A O-methyltransferase; cy 99.9 7.2E-21 2.5E-25 139.2 13.2 121 4-125 72-228 (232)
6 3tr6_A O-methyltransferase; ce 99.9 1.3E-20 4.5E-25 135.9 13.8 121 4-125 64-220 (225)
7 2avd_A Catechol-O-methyltransf 99.9 2.4E-20 8E-25 134.9 14.4 121 4-125 69-225 (229)
8 3duw_A OMT, O-methyltransferas 99.8 3E-20 1E-24 134.0 13.6 120 4-125 58-218 (223)
9 3ntv_A MW1564 protein; rossman 99.8 2.3E-20 7.8E-25 136.4 12.7 115 4-125 71-227 (232)
10 3tfw_A Putative O-methyltransf 99.8 5.5E-20 1.9E-24 135.8 13.3 118 4-125 63-221 (248)
11 2hnk_A SAM-dependent O-methylt 99.8 3.2E-18 1.1E-22 125.1 14.3 122 4-125 60-227 (239)
12 3c3p_A Methyltransferase; NP_9 99.8 6.6E-19 2.2E-23 126.2 8.9 115 4-125 56-205 (210)
13 3u81_A Catechol O-methyltransf 99.8 1.2E-18 4.2E-23 125.9 7.5 121 4-125 58-209 (221)
14 2gpy_A O-methyltransferase; st 99.7 1.9E-16 6.3E-21 115.0 8.9 117 4-125 54-210 (233)
15 2wk1_A NOVP; transferase, O-me 99.4 2.4E-13 8.3E-18 102.9 6.4 111 3-122 105-274 (282)
16 3cvo_A Methyltransferase-like 99.4 7.6E-13 2.6E-17 95.9 6.2 107 4-116 30-181 (202)
17 2bm8_A Cephalosporin hydroxyla 99.4 1.4E-12 4.7E-17 95.7 7.2 77 4-85 81-171 (236)
18 2b2c_A Spermidine synthase; be 99.3 1.3E-11 4.5E-16 94.4 9.9 111 3-120 107-256 (314)
19 2o07_A Spermidine synthase; st 99.3 3E-11 1E-15 91.9 9.6 111 3-120 94-243 (304)
20 1uir_A Polyamine aminopropyltr 99.2 1.2E-10 4E-15 88.8 9.9 113 3-122 76-232 (314)
21 1mjf_A Spermidine synthase; sp 99.1 2.8E-10 9.7E-15 85.3 10.2 110 4-122 75-229 (281)
22 2esr_A Methyltransferase; stru 99.1 3.6E-10 1.2E-14 78.1 8.5 63 4-74 31-108 (177)
23 3eey_A Putative rRNA methylase 99.1 1.8E-10 6.2E-15 80.9 6.1 65 4-74 22-101 (197)
24 3orh_A Guanidinoacetate N-meth 99.1 2.6E-10 8.8E-15 83.3 7.0 67 4-77 60-139 (236)
25 3e05_A Precorrin-6Y C5,15-meth 99.1 3.5E-10 1.2E-14 80.0 7.2 73 4-85 40-127 (204)
26 3kr9_A SAM-dependent methyltra 99.1 2.3E-10 7.8E-15 84.0 6.3 73 4-84 15-103 (225)
27 3dxy_A TRNA (guanine-N(7)-)-me 99.1 8.9E-10 3E-14 79.8 9.1 64 4-73 34-112 (218)
28 3lec_A NADB-rossmann superfami 99.0 3.4E-10 1.2E-14 83.3 6.4 63 4-74 21-98 (230)
29 3p9n_A Possible methyltransfer 99.0 2.3E-09 7.8E-14 75.0 10.2 66 3-76 43-123 (189)
30 3g89_A Ribosomal RNA small sub 99.0 6.6E-10 2.3E-14 82.0 7.4 74 4-84 80-168 (249)
31 3gnl_A Uncharacterized protein 99.0 4.4E-10 1.5E-14 83.5 6.3 62 4-73 21-97 (244)
32 3mti_A RRNA methylase; SAM-dep 99.0 6.1E-10 2.1E-14 77.4 6.7 60 4-73 22-96 (185)
33 3fpf_A Mtnas, putative unchara 99.0 8.4E-10 2.9E-14 84.1 7.9 69 4-84 122-206 (298)
34 1xdz_A Methyltransferase GIDB; 99.0 8.4E-10 2.9E-14 80.3 7.6 74 4-84 70-158 (240)
35 3hm2_A Precorrin-6Y C5,15-meth 99.0 9.1E-10 3.1E-14 75.7 7.1 72 4-84 25-111 (178)
36 2fhp_A Methylase, putative; al 99.0 1.7E-09 5.8E-14 74.8 8.5 67 4-75 44-125 (187)
37 3gjy_A Spermidine synthase; AP 99.0 2.6E-09 8.8E-14 82.0 9.9 66 6-77 91-170 (317)
38 3njr_A Precorrin-6Y methylase; 99.0 1.3E-09 4.5E-14 77.9 7.7 63 4-76 55-132 (204)
39 3jwh_A HEN1; methyltransferase 99.0 3.2E-09 1.1E-13 75.6 9.6 111 4-122 29-194 (217)
40 3jwg_A HEN1, methyltransferase 99.0 1.8E-09 6.1E-14 76.9 8.1 112 4-123 29-195 (219)
41 1xj5_A Spermidine synthase 1; 99.0 2.3E-09 7.9E-14 82.6 9.3 68 3-76 119-204 (334)
42 3lbf_A Protein-L-isoaspartate 99.0 1.3E-09 4.6E-14 77.1 7.4 67 4-81 77-158 (210)
43 1iy9_A Spermidine synthase; ro 99.0 4.1E-09 1.4E-13 78.8 10.3 67 4-77 75-159 (275)
44 2fca_A TRNA (guanine-N(7)-)-me 98.9 3.4E-09 1.2E-13 76.1 8.4 64 4-74 38-116 (213)
45 2pbf_A Protein-L-isoaspartate 98.9 2.2E-09 7.6E-14 76.9 7.4 74 4-80 80-176 (227)
46 3mb5_A SAM-dependent methyltra 98.9 1.2E-09 4.1E-14 79.6 6.0 65 4-76 93-172 (255)
47 1yzh_A TRNA (guanine-N(7)-)-me 98.9 1.6E-09 5.4E-14 77.3 6.4 65 4-75 41-120 (214)
48 3lpm_A Putative methyltransfer 98.9 1.9E-09 6.5E-14 79.3 6.9 63 4-73 49-126 (259)
49 3id6_C Fibrillarin-like rRNA/T 98.9 1.3E-09 4.5E-14 80.2 5.9 74 4-81 76-161 (232)
50 2qy6_A UPF0209 protein YFCK; s 98.9 3.2E-09 1.1E-13 79.1 7.8 71 4-76 60-183 (257)
51 3gdh_A Trimethylguanosine synt 98.9 2.7E-09 9.2E-14 77.1 7.1 62 4-76 78-154 (241)
52 2fpo_A Methylase YHHF; structu 98.9 3.6E-09 1.2E-13 75.3 7.6 63 4-75 54-131 (202)
53 4gek_A TRNA (CMO5U34)-methyltr 98.9 4.5E-09 1.5E-13 78.1 8.4 64 4-76 70-149 (261)
54 1l3i_A Precorrin-6Y methyltran 98.9 9.7E-09 3.3E-13 70.8 9.1 71 4-84 33-118 (192)
55 2yxd_A Probable cobalt-precorr 98.9 9.5E-09 3.2E-13 70.4 9.0 99 4-116 35-153 (183)
56 1zx0_A Guanidinoacetate N-meth 98.9 4E-09 1.4E-13 76.3 7.3 65 4-75 60-137 (236)
57 2pt6_A Spermidine synthase; tr 98.9 6.3E-09 2.2E-13 79.5 8.7 65 4-75 116-198 (321)
58 2plw_A Ribosomal RNA methyltra 98.9 5.9E-09 2E-13 73.2 7.8 72 4-76 22-116 (201)
59 1inl_A Spermidine synthase; be 98.9 5.9E-09 2E-13 78.7 8.2 67 4-77 90-174 (296)
60 1nt2_A Fibrillarin-like PRE-rR 98.9 2E-09 6.9E-14 77.4 5.1 69 4-77 57-137 (210)
61 2ift_A Putative methylase HI07 98.9 4.7E-09 1.6E-13 74.6 7.0 65 4-75 53-134 (201)
62 3ajd_A Putative methyltransfer 98.9 2.2E-08 7.4E-13 74.5 10.8 67 4-74 83-164 (274)
63 3kkz_A Uncharacterized protein 98.9 3.6E-09 1.2E-13 77.6 6.4 64 4-76 46-124 (267)
64 3gu3_A Methyltransferase; alph 98.9 2.7E-09 9.2E-14 79.4 5.6 66 4-77 22-100 (284)
65 2h00_A Methyltransferase 10 do 98.9 2.3E-09 7.8E-14 78.3 5.1 67 4-73 65-147 (254)
66 4dzr_A Protein-(glutamine-N5) 98.9 1.9E-09 6.7E-14 75.7 4.6 67 3-73 29-108 (215)
67 4df3_A Fibrillarin-like rRNA/T 98.9 8.8E-09 3E-13 75.9 8.2 71 4-78 77-159 (233)
68 2i7c_A Spermidine synthase; tr 98.9 1.4E-08 4.8E-13 76.2 9.4 67 3-76 77-161 (283)
69 1ws6_A Methyltransferase; stru 98.8 9.8E-09 3.4E-13 69.9 7.7 64 4-75 41-119 (171)
70 2yxe_A Protein-L-isoaspartate 98.8 5E-09 1.7E-13 74.4 6.5 70 4-81 77-161 (215)
71 4htf_A S-adenosylmethionine-de 98.8 7.4E-09 2.5E-13 76.6 7.4 65 4-77 68-147 (285)
72 1g8a_A Fibrillarin-like PRE-rR 98.8 5.7E-09 2E-13 74.9 6.6 70 4-77 73-154 (227)
73 2ozv_A Hypothetical protein AT 98.8 8E-09 2.8E-13 76.3 7.5 69 4-73 36-122 (260)
74 3f4k_A Putative methyltransfer 98.8 8.2E-09 2.8E-13 74.9 7.4 66 4-78 46-126 (257)
75 1i1n_A Protein-L-isoaspartate 98.8 6.9E-09 2.4E-13 74.3 6.9 70 4-80 77-165 (226)
76 1nkv_A Hypothetical protein YJ 98.8 7.1E-09 2.4E-13 75.2 6.9 62 4-75 36-112 (256)
77 1nv8_A HEMK protein; class I a 98.8 8.9E-09 3E-13 77.3 7.4 59 4-73 123-199 (284)
78 3dou_A Ribosomal RNA large sub 98.8 1.1E-08 3.7E-13 72.6 7.4 70 4-76 25-101 (191)
79 3adn_A Spermidine synthase; am 98.8 4.3E-09 1.5E-13 79.7 5.6 68 3-77 82-168 (294)
80 1o54_A SAM-dependent O-methylt 98.8 7.6E-09 2.6E-13 76.6 6.7 63 5-75 113-190 (277)
81 3sso_A Methyltransferase; macr 98.8 9.3E-09 3.2E-13 81.4 7.4 71 3-76 215-298 (419)
82 1dl5_A Protein-L-isoaspartate 98.8 8.6E-09 3E-13 78.1 7.0 69 4-80 75-158 (317)
83 2b78_A Hypothetical protein SM 98.8 2.9E-08 9.8E-13 77.5 10.0 67 4-75 212-294 (385)
84 3g07_A 7SK snRNA methylphospha 98.8 1.3E-08 4.4E-13 76.2 7.7 32 4-36 46-77 (292)
85 2ipx_A RRNA 2'-O-methyltransfe 98.8 5.4E-09 1.8E-13 75.4 5.4 66 4-75 77-156 (233)
86 3m6w_A RRNA methylase; rRNA me 98.8 1.5E-08 5.1E-13 81.3 8.3 64 4-75 101-179 (464)
87 1ej0_A FTSJ; methyltransferase 98.8 2E-08 7E-13 67.9 7.8 68 4-76 22-98 (180)
88 1jsx_A Glucose-inhibited divis 98.8 8.1E-09 2.8E-13 72.8 5.9 69 5-84 66-149 (207)
89 3ckk_A TRNA (guanine-N(7)-)-me 98.8 1.6E-08 5.5E-13 73.9 7.7 66 4-74 46-131 (235)
90 3m4x_A NOL1/NOP2/SUN family pr 98.8 1.4E-08 4.9E-13 81.2 7.8 65 4-75 105-184 (456)
91 2b3t_A Protein methyltransfera 98.8 1.3E-08 4.6E-13 75.4 7.2 60 4-73 109-183 (276)
92 2b25_A Hypothetical protein; s 98.8 8.2E-09 2.8E-13 78.6 5.9 68 4-76 105-197 (336)
93 3dtn_A Putative methyltransfer 98.8 1.6E-08 5.6E-13 72.4 7.2 67 4-79 44-122 (234)
94 3htx_A HEN1; HEN1, small RNA m 98.8 2.1E-08 7.3E-13 85.4 8.8 111 4-122 721-900 (950)
95 1ixk_A Methyltransferase; open 98.8 1.6E-08 5.3E-13 77.0 7.3 64 4-75 118-196 (315)
96 3g5t_A Trans-aconitate 3-methy 98.8 1.9E-08 6.6E-13 75.0 7.7 71 4-76 36-123 (299)
97 4azs_A Methyltransferase WBDD; 98.8 2.5E-08 8.6E-13 81.3 8.9 60 4-72 66-140 (569)
98 3hem_A Cyclopropane-fatty-acyl 98.8 2.6E-08 9E-13 74.4 8.4 61 4-76 72-147 (302)
99 2igt_A SAM dependent methyltra 98.8 2.6E-08 8.8E-13 76.5 8.3 66 4-75 153-234 (332)
100 3dlc_A Putative S-adenosyl-L-m 98.8 9.5E-09 3.3E-13 72.3 5.2 65 4-77 43-122 (219)
101 2nyu_A Putative ribosomal RNA 98.8 3.5E-08 1.2E-12 68.8 8.1 72 4-76 22-107 (196)
102 1pjz_A Thiopurine S-methyltran 98.7 7.6E-09 2.6E-13 73.6 4.4 63 4-75 22-110 (203)
103 3q87_B N6 adenine specific DNA 98.7 7.9E-09 2.7E-13 71.6 4.3 60 3-74 22-86 (170)
104 3bwc_A Spermidine synthase; SA 98.7 3.4E-08 1.2E-12 74.7 8.1 68 3-76 94-179 (304)
105 1fbn_A MJ fibrillarin homologu 98.7 3.2E-08 1.1E-12 71.4 7.6 67 4-75 74-152 (230)
106 1jg1_A PIMT;, protein-L-isoasp 98.7 1.7E-08 5.9E-13 72.9 6.2 68 4-81 91-173 (235)
107 2frx_A Hypothetical protein YE 98.7 2.3E-08 7.7E-13 80.4 7.3 65 4-75 117-196 (479)
108 3ege_A Putative methyltransfer 98.7 6.4E-08 2.2E-12 71.0 9.1 90 4-117 34-131 (261)
109 2frn_A Hypothetical protein PH 98.7 1.1E-08 3.6E-13 76.5 4.9 63 4-76 125-202 (278)
110 2pwy_A TRNA (adenine-N(1)-)-me 98.7 2.2E-08 7.4E-13 72.7 6.5 64 4-75 96-175 (258)
111 1vbf_A 231AA long hypothetical 98.7 3.3E-08 1.1E-12 70.8 7.3 66 4-80 70-148 (231)
112 2as0_A Hypothetical protein PH 98.7 5.2E-08 1.8E-12 76.0 8.9 67 4-75 217-298 (396)
113 3a27_A TYW2, uncharacterized p 98.7 1.8E-08 6.2E-13 75.0 6.0 70 4-84 119-203 (272)
114 2r6z_A UPF0341 protein in RSP 98.7 8.9E-09 3E-13 76.6 4.2 65 5-75 84-170 (258)
115 3ocj_A Putative exported prote 98.7 7.1E-09 2.4E-13 77.8 3.7 64 4-75 118-196 (305)
116 3evz_A Methyltransferase; NYSG 98.7 1.8E-08 6.2E-13 72.1 5.7 60 4-73 55-130 (230)
117 1dus_A MJ0882; hypothetical pr 98.7 3.6E-08 1.2E-12 67.9 7.1 62 4-76 52-129 (194)
118 4hg2_A Methyltransferase type 98.7 2.6E-08 9E-13 73.9 6.7 64 4-77 39-110 (257)
119 3tos_A CALS11; methyltransfera 98.7 1.4E-07 4.9E-12 70.4 10.7 118 4-123 69-250 (257)
120 3ll7_A Putative methyltransfer 98.7 1.7E-08 5.8E-13 79.8 5.9 61 5-74 94-171 (410)
121 3q7e_A Protein arginine N-meth 98.7 2.5E-08 8.6E-13 76.7 6.6 62 4-74 66-141 (349)
122 1r18_A Protein-L-isoaspartate( 98.7 8.1E-09 2.8E-13 74.2 3.6 69 5-80 85-177 (227)
123 3bus_A REBM, methyltransferase 98.7 3.4E-08 1.2E-12 72.3 6.7 66 4-78 61-141 (273)
124 3mgg_A Methyltransferase; NYSG 98.7 3.1E-08 1E-12 72.8 6.3 64 4-76 37-115 (276)
125 2gb4_A Thiopurine S-methyltran 98.7 4.1E-08 1.4E-12 72.6 7.0 63 4-75 68-161 (252)
126 2dul_A N(2),N(2)-dimethylguano 98.7 8.8E-08 3E-12 74.8 9.2 72 4-84 47-148 (378)
127 2vdv_E TRNA (guanine-N(7)-)-me 98.7 3.5E-08 1.2E-12 72.0 6.4 65 4-74 49-136 (246)
128 3grz_A L11 mtase, ribosomal pr 98.7 3E-08 1E-12 69.9 5.8 69 4-84 60-143 (205)
129 3fzg_A 16S rRNA methylase; met 98.7 5.8E-08 2E-12 70.0 7.2 58 4-72 49-121 (200)
130 1wy7_A Hypothetical protein PH 98.7 7.6E-08 2.6E-12 67.8 7.8 58 4-75 49-121 (207)
131 3c0k_A UPF0064 protein YCCW; P 98.7 1E-07 3.5E-12 74.3 9.2 67 4-75 220-302 (396)
132 4dcm_A Ribosomal RNA large sub 98.7 2.9E-08 9.9E-13 77.4 6.0 62 5-75 223-301 (375)
133 4hc4_A Protein arginine N-meth 98.7 4.1E-08 1.4E-12 76.8 6.7 60 4-73 83-156 (376)
134 3dh0_A SAM dependent methyltra 98.7 1.7E-08 5.7E-13 71.6 4.1 67 4-78 37-118 (219)
135 1yb2_A Hypothetical protein TA 98.7 3.4E-08 1.2E-12 73.2 5.9 63 4-75 110-188 (275)
136 3r0q_C Probable protein argini 98.7 6.6E-08 2.3E-12 75.1 7.7 61 4-74 63-137 (376)
137 3ou2_A SAM-dependent methyltra 98.6 5E-08 1.7E-12 68.8 6.4 63 4-78 46-119 (218)
138 3lcc_A Putative methyl chlorid 98.6 1.5E-08 5.2E-13 72.9 3.6 62 4-76 66-142 (235)
139 2qfm_A Spermine synthase; sper 98.6 1.7E-07 5.9E-12 73.1 9.7 68 4-76 188-277 (364)
140 3vc1_A Geranyl diphosphate 2-C 98.6 3.7E-08 1.3E-12 74.1 5.8 63 4-75 117-194 (312)
141 3v97_A Ribosomal RNA large sub 98.6 1.3E-07 4.4E-12 79.2 9.6 64 4-75 539-618 (703)
142 1ne2_A Hypothetical protein TA 98.6 8.8E-08 3E-12 67.3 7.4 59 4-75 51-119 (200)
143 3axs_A Probable N(2),N(2)-dime 98.6 9E-08 3.1E-12 75.3 8.1 73 5-84 53-142 (392)
144 2b9e_A NOL1/NOP2/SUN domain fa 98.6 5.6E-08 1.9E-12 74.0 6.8 67 4-75 102-183 (309)
145 3m33_A Uncharacterized protein 98.6 1.7E-08 5.7E-13 72.6 3.6 64 4-76 48-121 (226)
146 1g6q_1 HnRNP arginine N-methyl 98.6 5.7E-08 1.9E-12 74.1 6.7 62 4-74 38-113 (328)
147 1i9g_A Hypothetical protein RV 98.6 4.1E-08 1.4E-12 72.3 5.6 65 4-75 99-180 (280)
148 2fyt_A Protein arginine N-meth 98.6 6.8E-08 2.3E-12 74.1 7.0 62 4-74 64-139 (340)
149 3mcz_A O-methyltransferase; ad 98.6 7.6E-08 2.6E-12 73.3 7.2 67 5-78 180-260 (352)
150 2p7i_A Hypothetical protein; p 98.6 2.8E-08 9.7E-13 71.1 4.5 62 4-76 42-113 (250)
151 1wxx_A TT1595, hypothetical pr 98.6 1.2E-07 4.1E-12 73.7 8.4 64 5-75 210-288 (382)
152 3dli_A Methyltransferase; PSI- 98.6 2.8E-08 9.5E-13 71.8 4.5 65 4-76 41-111 (240)
153 3ofk_A Nodulation protein S; N 98.6 3.7E-08 1.3E-12 69.8 5.0 62 4-76 51-124 (216)
154 2p35_A Trans-aconitate 2-methy 98.6 1.6E-08 5.6E-13 73.3 3.2 66 4-78 33-107 (259)
155 3tm4_A TRNA (guanine N2-)-meth 98.6 5.5E-08 1.9E-12 75.5 6.3 63 4-74 217-294 (373)
156 2o57_A Putative sarcosine dime 98.6 3.5E-08 1.2E-12 73.2 5.0 65 4-77 82-161 (297)
157 1m6y_A S-adenosyl-methyltransf 98.6 1.3E-07 4.6E-12 71.8 8.0 70 4-76 26-108 (301)
158 3ujc_A Phosphoethanolamine N-m 98.6 9.3E-08 3.2E-12 69.3 6.8 67 4-79 55-133 (266)
159 2oyr_A UPF0341 protein YHIQ; a 98.6 1.6E-08 5.4E-13 75.5 2.6 61 6-75 90-173 (258)
160 2y1w_A Histone-arginine methyl 98.6 1.1E-07 3.9E-12 72.9 7.5 62 4-75 50-125 (348)
161 3bt7_A TRNA (uracil-5-)-methyl 98.6 1.6E-07 5.4E-12 72.7 8.4 76 5-84 214-314 (369)
162 3dp7_A SAM-dependent methyltra 98.6 6.1E-08 2.1E-12 74.7 6.0 68 4-79 179-261 (363)
163 3m70_A Tellurite resistance pr 98.6 1.3E-07 4.5E-12 69.9 7.2 59 4-75 120-193 (286)
164 1kpg_A CFA synthase;, cyclopro 98.6 1.5E-07 5.2E-12 69.4 7.5 60 4-75 64-138 (287)
165 2fk8_A Methoxy mycolic acid sy 98.6 1.5E-07 5.2E-12 70.6 7.5 61 4-76 90-165 (318)
166 2ex4_A Adrenal gland protein A 98.6 4.9E-08 1.7E-12 70.5 4.6 66 4-78 79-158 (241)
167 3l8d_A Methyltransferase; stru 98.6 1.1E-07 3.6E-12 68.3 6.2 64 4-77 53-127 (242)
168 1vl5_A Unknown conserved prote 98.6 8.3E-08 2.8E-12 69.9 5.5 63 4-77 37-114 (260)
169 4fsd_A Arsenic methyltransfera 98.6 1.1E-07 3.7E-12 73.8 6.4 73 4-77 83-177 (383)
170 2yvl_A TRMI protein, hypotheti 98.6 1.2E-07 4E-12 68.4 6.2 62 4-75 91-167 (248)
171 1qzz_A RDMB, aclacinomycin-10- 98.6 1.4E-07 4.7E-12 72.3 6.9 66 4-79 182-261 (374)
172 2nxc_A L11 mtase, ribosomal pr 98.5 2E-07 6.9E-12 68.5 7.5 68 4-84 120-202 (254)
173 2cmg_A Spermidine synthase; tr 98.5 1.6E-07 5.5E-12 69.9 6.9 60 4-76 72-149 (262)
174 3sm3_A SAM-dependent methyltra 98.5 2.6E-07 9E-12 65.6 7.7 63 4-76 30-111 (235)
175 2yqz_A Hypothetical protein TT 98.5 1E-07 3.5E-12 69.0 5.5 65 4-78 39-116 (263)
176 3g5l_A Putative S-adenosylmeth 98.5 2E-07 6.8E-12 67.5 7.0 63 4-76 44-118 (253)
177 3i53_A O-methyltransferase; CO 98.5 1.2E-07 4.2E-12 71.8 6.0 64 4-77 169-246 (332)
178 3h2b_A SAM-dependent methyltra 98.5 8.8E-08 3E-12 67.2 4.8 62 5-76 42-112 (203)
179 3mq2_A 16S rRNA methyltransfer 98.5 1.3E-07 4.6E-12 67.1 5.8 62 4-74 27-106 (218)
180 4dmg_A Putative uncharacterize 98.5 3.2E-07 1.1E-11 72.0 8.3 60 5-75 215-289 (393)
181 2wa2_A Non-structural protein 98.5 1.6E-07 5.4E-12 70.5 6.3 59 4-75 82-157 (276)
182 3bkx_A SAM-dependent methyltra 98.5 1.5E-07 5.2E-12 68.8 6.1 67 4-76 43-132 (275)
183 1uwv_A 23S rRNA (uracil-5-)-me 98.5 1.7E-07 5.7E-12 74.1 6.7 74 4-84 286-374 (433)
184 2oxt_A Nucleoside-2'-O-methylt 98.5 1.5E-07 5.2E-12 70.2 5.8 58 5-75 75-149 (265)
185 2xvm_A Tellurite resistance pr 98.5 2.7E-07 9.3E-12 64.0 6.8 61 4-76 32-107 (199)
186 3gru_A Dimethyladenosine trans 98.5 9.3E-08 3.2E-12 72.6 4.7 61 4-74 50-122 (295)
187 3gwz_A MMCR; methyltransferase 98.5 2E-07 6.7E-12 72.0 6.6 66 4-79 202-281 (369)
188 1xxl_A YCGJ protein; structura 98.5 1.3E-07 4.4E-12 68.4 5.1 63 4-77 21-98 (239)
189 3tma_A Methyltransferase; thum 98.5 1.6E-07 5.5E-12 72.0 5.9 63 4-74 203-280 (354)
190 2yxl_A PH0851 protein, 450AA l 98.5 1.4E-07 4.8E-12 74.9 5.7 66 4-75 259-339 (450)
191 1u2z_A Histone-lysine N-methyl 98.5 2.4E-07 8.2E-12 73.7 7.0 63 4-73 242-330 (433)
192 1zq9_A Probable dimethyladenos 98.5 2.2E-07 7.4E-12 69.7 6.3 60 4-75 28-102 (285)
193 3b3j_A Histone-arginine methyl 98.5 2.4E-07 8.3E-12 74.4 7.0 61 4-74 158-232 (480)
194 1tw3_A COMT, carminomycin 4-O- 98.5 2.7E-07 9.3E-12 70.4 6.9 66 4-79 183-262 (360)
195 1p91_A Ribosomal RNA large sub 98.5 1E-07 3.4E-12 69.8 4.1 73 4-84 85-166 (269)
196 3k6r_A Putative transferase PH 98.5 1.1E-07 3.9E-12 71.6 4.5 63 4-76 125-202 (278)
197 3dmg_A Probable ribosomal RNA 98.5 1.7E-07 5.9E-12 73.2 5.7 60 4-75 233-307 (381)
198 1wzn_A SAM-dependent methyltra 98.5 2.2E-07 7.4E-12 67.2 5.8 60 4-74 41-113 (252)
199 1sqg_A SUN protein, FMU protei 98.5 3.8E-07 1.3E-11 71.9 7.3 64 4-75 246-324 (429)
200 1ve3_A Hypothetical protein PH 98.5 1.7E-07 5.7E-12 66.5 4.7 62 4-75 38-112 (227)
201 2ih2_A Modification methylase 98.4 3.9E-07 1.3E-11 70.7 7.2 62 4-73 39-105 (421)
202 1ri5_A MRNA capping enzyme; me 98.4 3E-07 1E-11 67.7 6.2 65 4-76 64-143 (298)
203 3hnr_A Probable methyltransfer 98.4 1.3E-07 4.6E-12 66.9 4.1 64 4-78 45-118 (220)
204 3g2m_A PCZA361.24; SAM-depende 98.4 1.3E-07 4.5E-12 70.4 4.2 59 4-73 82-157 (299)
205 2qm3_A Predicted methyltransfe 98.4 1.6E-07 5.5E-12 72.7 4.8 63 4-74 172-249 (373)
206 3bkw_A MLL3908 protein, S-aden 98.4 4.7E-07 1.6E-11 64.8 6.9 64 4-76 43-117 (243)
207 1xtp_A LMAJ004091AAA; SGPP, st 98.4 3E-07 1E-11 66.3 5.9 67 4-79 93-171 (254)
208 3ccf_A Cyclopropane-fatty-acyl 98.4 2.4E-07 8.3E-12 68.3 5.5 61 4-76 57-127 (279)
209 3e8s_A Putative SAM dependent 98.4 3E-07 1E-11 64.9 5.3 75 4-84 52-136 (227)
210 2r3s_A Uncharacterized protein 98.4 4.4E-07 1.5E-11 68.4 6.5 67 3-78 164-244 (335)
211 2ip2_A Probable phenazine-spec 98.4 2E-07 6.8E-12 70.5 4.3 64 6-79 169-246 (334)
212 3p2e_A 16S rRNA methylase; met 98.4 5.1E-07 1.8E-11 65.4 6.2 62 4-73 24-104 (225)
213 2pxx_A Uncharacterized protein 98.4 3.5E-07 1.2E-11 64.1 5.1 61 4-73 42-114 (215)
214 2yx1_A Hypothetical protein MJ 98.4 6.2E-07 2.1E-11 68.6 6.9 57 4-74 195-266 (336)
215 3tqs_A Ribosomal RNA small sub 98.4 2.9E-07 1E-11 68.3 4.8 61 4-72 29-102 (255)
216 1o9g_A RRNA methyltransferase; 98.4 5.1E-08 1.7E-12 71.1 0.5 32 4-36 51-84 (250)
217 3pfg_A N-methyltransferase; N, 98.4 2E-07 6.7E-12 68.0 3.5 59 4-74 50-118 (263)
218 2h1r_A Dimethyladenosine trans 98.4 2.5E-07 8.5E-12 69.9 4.1 59 4-75 42-115 (299)
219 3lst_A CALO1 methyltransferase 98.4 6.3E-07 2.1E-11 68.5 6.3 65 4-79 184-260 (348)
220 2p41_A Type II methyltransfera 98.4 6.1E-07 2.1E-11 68.1 6.1 59 5-76 83-158 (305)
221 1x19_A CRTF-related protein; m 98.4 9.9E-07 3.4E-11 67.5 7.2 66 4-79 190-269 (359)
222 3iv6_A Putative Zn-dependent a 98.3 1E-06 3.6E-11 65.7 7.0 30 4-36 45-74 (261)
223 3thr_A Glycine N-methyltransfe 98.3 3.2E-07 1.1E-11 67.8 4.1 63 4-73 57-137 (293)
224 3cgg_A SAM-dependent methyltra 98.3 3.4E-07 1.2E-11 63.0 4.0 61 4-74 46-115 (195)
225 2kw5_A SLR1183 protein; struct 98.3 4.6E-07 1.6E-11 63.4 4.4 60 5-74 30-102 (202)
226 3ggd_A SAM-dependent methyltra 98.3 8.3E-07 2.8E-11 63.9 5.7 68 4-79 56-137 (245)
227 3uwp_A Histone-lysine N-methyl 98.3 1.2E-06 4.1E-11 69.6 6.8 65 4-74 173-260 (438)
228 1y8c_A S-adenosylmethionine-de 98.3 7E-07 2.4E-11 63.8 5.0 60 4-74 37-109 (246)
229 3d2l_A SAM-dependent methyltra 98.3 7.4E-07 2.5E-11 63.7 5.0 59 4-74 33-104 (243)
230 3e23_A Uncharacterized protein 98.3 5.2E-07 1.8E-11 63.6 4.1 63 4-77 43-113 (211)
231 3fut_A Dimethyladenosine trans 98.3 1.5E-06 5E-11 65.1 6.5 58 7-74 49-118 (271)
232 3i9f_A Putative type 11 methyl 98.3 3.9E-07 1.3E-11 62.1 3.0 63 4-79 17-88 (170)
233 2jjq_A Uncharacterized RNA met 98.3 1.1E-06 3.7E-11 69.6 5.8 59 4-76 290-363 (425)
234 3bxo_A N,N-dimethyltransferase 98.2 6.8E-07 2.3E-11 63.8 3.8 59 4-74 40-108 (239)
235 1fp2_A Isoflavone O-methyltran 98.2 1.9E-06 6.6E-11 65.8 6.4 63 4-77 188-257 (352)
236 3reo_A (ISO)eugenol O-methyltr 98.2 2.1E-06 7.3E-11 66.2 6.5 63 4-77 203-272 (368)
237 4auk_A Ribosomal RNA large sub 98.2 1.1E-06 3.8E-11 68.7 4.9 63 4-76 211-280 (375)
238 2xyq_A Putative 2'-O-methyl tr 98.2 2.2E-06 7.4E-11 64.9 6.3 61 5-75 64-132 (290)
239 3hp7_A Hemolysin, putative; st 98.2 2.1E-06 7.4E-11 65.0 6.1 74 4-84 85-169 (291)
240 2pjd_A Ribosomal RNA small sub 98.2 4.7E-07 1.6E-11 69.3 2.2 61 4-76 196-271 (343)
241 3p9c_A Caffeic acid O-methyltr 98.2 3.3E-06 1.1E-10 65.1 6.7 65 4-79 201-272 (364)
242 3cc8_A Putative methyltransfer 98.2 2.2E-06 7.6E-11 60.4 5.3 65 4-76 32-103 (230)
243 1fp1_D Isoliquiritigenin 2'-O- 98.2 3.6E-06 1.2E-10 64.8 6.9 65 4-79 209-280 (372)
244 2p8j_A S-adenosylmethionine-de 98.2 6.2E-07 2.1E-11 62.9 2.0 63 4-75 23-98 (209)
245 2gs9_A Hypothetical protein TT 98.2 1.8E-06 6.1E-11 60.7 4.4 62 4-78 36-107 (211)
246 3uzu_A Ribosomal RNA small sub 98.2 1.4E-06 4.7E-11 65.5 3.9 50 4-53 42-102 (279)
247 1qam_A ERMC' methyltransferase 98.2 4.3E-06 1.5E-10 61.2 6.6 47 4-53 30-88 (244)
248 2qe6_A Uncharacterized protein 98.1 1.6E-05 5.3E-10 59.2 9.6 71 4-76 77-167 (274)
249 1zg3_A Isoflavanone 4'-O-methy 98.1 4.8E-06 1.6E-10 63.7 6.9 64 4-78 193-263 (358)
250 2avn_A Ubiquinone/menaquinone 98.1 1.9E-06 6.5E-11 62.9 4.4 59 4-74 54-122 (260)
251 3bgv_A MRNA CAP guanine-N7 met 98.1 2.9E-06 9.8E-11 63.6 5.1 68 4-76 34-124 (313)
252 4e2x_A TCAB9; kijanose, tetron 98.1 3E-06 1E-10 65.9 4.6 67 4-79 107-184 (416)
253 4a6d_A Hydroxyindole O-methylt 98.1 1E-05 3.5E-10 62.1 7.3 66 4-79 179-257 (353)
254 3ldu_A Putative methylase; str 98.1 1.7E-05 5.6E-10 62.0 8.6 96 5-117 196-343 (385)
255 2aot_A HMT, histamine N-methyl 98.1 1.3E-05 4.6E-10 59.4 7.7 72 5-79 53-148 (292)
256 2i62_A Nicotinamide N-methyltr 98.1 5.9E-07 2E-11 65.0 0.3 31 4-36 56-86 (265)
257 3k0b_A Predicted N6-adenine-sp 98.1 2.6E-05 8.9E-10 61.1 9.6 96 5-117 202-349 (393)
258 3bzb_A Uncharacterized protein 98.0 7.6E-06 2.6E-10 60.9 6.1 31 4-36 79-109 (281)
259 3ftd_A Dimethyladenosine trans 98.0 5E-06 1.7E-10 61.3 5.0 48 4-53 31-88 (249)
260 3ldg_A Putative uncharacterize 98.0 1.1E-05 3.7E-10 63.1 6.9 96 5-117 195-342 (384)
261 2zfu_A Nucleomethylin, cerebra 98.0 1.7E-06 5.7E-11 61.2 2.0 59 4-76 67-125 (215)
262 1yub_A Ermam, rRNA methyltrans 98.0 1.3E-06 4.3E-11 63.8 1.4 60 4-73 29-100 (245)
263 3frh_A 16S rRNA methylase; met 98.0 5.9E-06 2E-10 61.4 4.7 57 4-72 105-174 (253)
264 2f8l_A Hypothetical protein LM 98.0 2.8E-06 9.6E-11 64.9 2.7 61 5-75 131-210 (344)
265 1af7_A Chemotaxis receptor met 97.9 9.3E-06 3.2E-10 60.8 4.7 32 5-36 106-144 (274)
266 2vdw_A Vaccinia virus capping 97.9 1.7E-05 5.8E-10 59.9 6.2 64 5-74 49-137 (302)
267 3lcv_B Sisomicin-gentamicin re 97.9 2E-06 6.9E-11 64.7 0.8 60 4-72 132-204 (281)
268 4gqb_A Protein arginine N-meth 97.9 8.3E-06 2.8E-10 67.7 4.5 61 5-73 358-435 (637)
269 3o4f_A Spermidine synthase; am 97.9 2.4E-05 8.2E-10 59.4 6.4 67 3-76 82-167 (294)
270 1qyr_A KSGA, high level kasuga 97.8 1.4E-05 4.6E-10 59.2 4.4 46 5-53 22-79 (252)
271 2k4m_A TR8_protein, UPF0146 pr 97.8 3.5E-05 1.2E-09 53.1 5.6 58 5-72 36-95 (153)
272 2g72_A Phenylethanolamine N-me 97.8 4.2E-06 1.4E-10 62.0 0.8 31 4-36 71-101 (289)
273 3opn_A Putative hemolysin; str 97.8 2.4E-05 8.1E-10 57.0 4.7 31 4-36 37-67 (232)
274 1vlm_A SAM-dependent methyltra 97.7 1.5E-05 5.2E-10 56.5 2.5 58 5-76 48-112 (219)
275 3ua3_A Protein arginine N-meth 97.7 2.7E-05 9.1E-10 65.4 3.8 67 5-73 410-502 (745)
276 3c6k_A Spermine synthase; sper 97.7 0.00024 8.4E-09 55.6 9.0 68 3-75 204-293 (381)
277 3p8z_A Mtase, non-structural p 97.6 0.00012 4E-09 54.3 6.0 70 5-84 79-162 (267)
278 4fzv_A Putative methyltransfer 97.5 0.00021 7.3E-09 55.5 7.2 64 5-75 149-232 (359)
279 2px2_A Genome polyprotein [con 97.5 3.1E-05 1.1E-09 57.8 2.1 65 4-77 73-150 (269)
280 3giw_A Protein of unknown func 97.5 0.0002 6.8E-09 53.9 5.9 50 4-53 78-143 (277)
281 3v97_A Ribosomal RNA large sub 97.5 0.00016 5.6E-09 60.4 5.8 99 5-117 191-346 (703)
282 3evf_A RNA-directed RNA polyme 97.4 0.00019 6.6E-09 53.9 5.6 65 5-77 75-151 (277)
283 3pvc_A TRNA 5-methylaminomethy 97.4 0.00019 6.4E-09 59.5 5.9 73 4-78 58-183 (689)
284 3vyw_A MNMC2; tRNA wobble urid 97.4 0.00064 2.2E-08 51.8 7.8 74 6-84 98-205 (308)
285 3gcz_A Polyprotein; flavivirus 97.4 0.00048 1.6E-08 51.9 6.8 65 5-77 91-167 (282)
286 1wg8_A Predicted S-adenosylmet 97.3 0.00086 3E-08 50.6 8.1 69 5-79 23-102 (285)
287 3lkz_A Non-structural protein 97.3 0.00026 8.9E-09 53.9 4.7 70 5-84 95-178 (321)
288 2okc_A Type I restriction enzy 97.3 8.5E-05 2.9E-09 58.7 2.1 61 5-73 172-260 (445)
289 3tka_A Ribosomal RNA small sub 97.1 0.0019 6.4E-08 50.0 7.4 74 5-79 58-141 (347)
290 3lkd_A Type I restriction-modi 97.0 0.0016 5.5E-08 53.0 6.8 65 4-73 221-304 (542)
291 2ar0_A M.ecoki, type I restric 97.0 0.00082 2.8E-08 54.6 5.0 63 5-73 170-268 (541)
292 3r24_A NSP16, 2'-O-methyl tran 97.0 0.002 6.9E-08 49.2 6.7 62 5-76 110-179 (344)
293 1i4w_A Mitochondrial replicati 96.9 0.0011 3.7E-08 51.4 5.0 47 5-53 59-117 (353)
294 3eld_A Methyltransferase; flav 96.7 0.0038 1.3E-07 47.3 6.2 65 4-77 81-158 (300)
295 2a14_A Indolethylamine N-methy 96.5 0.00036 1.2E-08 51.0 -0.1 31 4-36 55-85 (263)
296 3khk_A Type I restriction-modi 96.5 0.00024 8.3E-09 57.8 -1.3 63 5-73 245-336 (544)
297 2oo3_A Protein involved in cat 96.4 0.0042 1.4E-07 46.8 4.7 67 4-76 91-169 (283)
298 3s1s_A Restriction endonucleas 96.0 0.0046 1.6E-07 52.8 3.9 32 5-36 322-355 (878)
299 3ps9_A TRNA 5-methylaminomethy 95.9 0.012 4.3E-07 48.3 6.0 77 6-84 68-198 (676)
300 2efj_A 3,7-dimethylxanthine me 95.3 0.018 6.1E-07 45.0 4.4 21 5-25 53-73 (384)
301 2py6_A Methyltransferase FKBM; 94.8 0.04 1.4E-06 43.1 5.2 33 4-36 226-259 (409)
302 2zig_A TTHA0409, putative modi 94.2 0.05 1.7E-06 40.4 4.4 30 4-36 235-264 (297)
303 1m6e_X S-adenosyl-L-methionnin 93.7 0.0088 3E-07 46.4 -0.7 70 5-78 52-151 (359)
304 3iht_A S-adenosyl-L-methionine 92.7 0.8 2.8E-05 31.7 8.0 70 5-77 41-117 (174)
305 2ld4_A Anamorsin; methyltransf 92.6 0.031 1.1E-06 37.7 0.8 61 4-75 12-72 (176)
306 3b5i_A S-adenosyl-L-methionine 91.4 0.092 3.1E-06 40.8 2.3 32 5-36 53-98 (374)
307 3ufb_A Type I restriction-modi 89.5 0.11 3.8E-06 42.0 1.3 65 5-73 218-309 (530)
308 1f8f_A Benzyl alcohol dehydrog 88.6 0.74 2.5E-05 34.8 5.3 31 5-36 191-222 (371)
309 2dph_A Formaldehyde dismutase; 87.3 1.1 3.8E-05 34.2 5.6 32 4-36 185-217 (398)
310 3s2e_A Zinc-containing alcohol 86.3 2 6.8E-05 31.9 6.5 31 4-36 166-197 (340)
311 3fpc_A NADP-dependent alcohol 85.8 1 3.5E-05 33.7 4.6 32 4-36 166-198 (352)
312 1g55_A DNA cytosine methyltran 85.7 0.71 2.4E-05 35.0 3.7 65 5-74 2-76 (343)
313 3ruf_A WBGU; rossmann fold, UD 85.6 1.9 6.4E-05 31.7 6.0 67 3-76 23-110 (351)
314 3jv7_A ADH-A; dehydrogenase, n 85.4 2 6.9E-05 31.9 6.1 32 4-36 171-203 (345)
315 1g60_A Adenine-specific methyl 84.8 1.2 4.2E-05 32.1 4.5 30 4-36 212-241 (260)
316 1pl8_A Human sorbitol dehydrog 84.5 2.5 8.4E-05 31.7 6.3 32 4-36 171-203 (356)
317 3g7u_A Cytosine-specific methy 84.0 1.8 6.1E-05 33.4 5.3 65 6-74 3-79 (376)
318 4eez_A Alcohol dehydrogenase 1 82.9 8.3 0.00028 28.4 8.6 67 5-76 164-242 (348)
319 1kol_A Formaldehyde dehydrogen 81.7 4.3 0.00015 30.8 6.7 32 4-36 185-217 (398)
320 4ej6_A Putative zinc-binding d 81.3 1.7 6E-05 32.8 4.3 32 4-36 182-214 (370)
321 2zig_A TTHA0409, putative modi 81.2 1.1 3.8E-05 33.0 3.1 29 41-74 20-48 (297)
322 1boo_A Protein (N-4 cytosine-s 80.1 1.5 5E-05 32.9 3.5 30 41-75 13-42 (323)
323 4egb_A DTDP-glucose 4,6-dehydr 79.9 2.3 8E-05 31.1 4.5 70 2-76 21-108 (346)
324 1e3i_A Alcohol dehydrogenase, 79.6 3.9 0.00013 30.8 5.8 31 5-36 196-227 (376)
325 3uog_A Alcohol dehydrogenase; 79.6 6.5 0.00022 29.4 7.0 74 4-84 189-275 (363)
326 1g60_A Adenine-specific methyl 79.1 1.3 4.4E-05 32.0 2.8 29 42-75 4-32 (260)
327 3abi_A Putative uncharacterize 78.9 5.6 0.00019 30.0 6.4 63 4-74 15-85 (365)
328 1cdo_A Alcohol dehydrogenase; 78.9 4.3 0.00015 30.5 5.8 31 5-36 193-224 (374)
329 1pqw_A Polyketide synthase; ro 78.8 3.9 0.00013 27.6 5.1 31 4-36 38-70 (198)
330 3uko_A Alcohol dehydrogenase c 78.5 2.4 8.2E-05 32.0 4.3 31 5-36 194-225 (378)
331 2jhf_A Alcohol dehydrogenase E 78.5 4.2 0.00014 30.5 5.7 31 5-36 192-223 (374)
332 3gms_A Putative NADPH:quinone 78.3 3.1 0.00011 30.9 4.8 31 4-36 144-176 (340)
333 1p0f_A NADP-dependent alcohol 78.3 3.2 0.00011 31.2 4.9 31 5-36 192-223 (373)
334 2c7p_A Modification methylase 77.8 2.3 7.9E-05 32.0 4.0 57 5-73 11-78 (327)
335 2q2k_A Hypothetical protein; p 77.7 1.8 6.1E-05 24.6 2.5 35 75-109 32-69 (70)
336 3ip1_A Alcohol dehydrogenase, 76.6 4 0.00014 31.2 5.1 31 5-36 214-245 (404)
337 3rd5_A Mypaa.01249.C; ssgcid, 75.9 19 0.00064 25.8 8.4 70 3-76 14-96 (291)
338 1e3j_A NADP(H)-dependent ketos 74.8 9.5 0.00032 28.3 6.7 31 4-36 168-199 (352)
339 3dhn_A NAD-dependent epimerase 74.7 12 0.00042 25.3 6.8 65 5-76 4-77 (227)
340 3enk_A UDP-glucose 4-epimerase 74.3 13 0.00046 26.8 7.3 71 2-77 2-89 (341)
341 1vj0_A Alcohol dehydrogenase, 74.2 6.9 0.00023 29.5 5.8 31 5-36 196-227 (380)
342 1eg2_A Modification methylase 74.0 3.3 0.00011 31.1 3.9 30 41-75 37-67 (319)
343 3sxp_A ADP-L-glycero-D-mannohe 72.7 13 0.00046 27.3 7.0 69 2-76 7-100 (362)
344 3qwb_A Probable quinone oxidor 72.5 8.1 0.00028 28.4 5.7 31 4-36 148-180 (334)
345 3qiv_A Short-chain dehydrogena 72.3 15 0.0005 25.6 6.9 75 1-76 5-96 (253)
346 3gqv_A Enoyl reductase; medium 72.3 9.2 0.00032 28.7 6.1 32 3-36 163-196 (371)
347 2eih_A Alcohol dehydrogenase; 72.1 12 0.00042 27.6 6.7 31 4-36 166-198 (343)
348 2hcy_A Alcohol dehydrogenase 1 71.9 12 0.0004 27.7 6.6 31 4-36 169-201 (347)
349 3lyl_A 3-oxoacyl-(acyl-carrier 71.6 13 0.00044 25.8 6.4 72 1-76 1-92 (247)
350 2fzw_A Alcohol dehydrogenase c 71.6 4.8 0.00016 30.2 4.4 31 5-36 191-222 (373)
351 4b7c_A Probable oxidoreductase 71.6 7.7 0.00026 28.5 5.4 31 4-36 149-181 (336)
352 4a2c_A Galactitol-1-phosphate 70.4 13 0.00043 27.4 6.4 66 4-74 160-237 (346)
353 2c5a_A GDP-mannose-3', 5'-epim 70.3 15 0.0005 27.4 6.8 66 4-76 28-103 (379)
354 4eye_A Probable oxidoreductase 70.0 13 0.00045 27.5 6.5 31 4-36 159-191 (342)
355 4id9_A Short-chain dehydrogena 69.9 7.4 0.00025 28.4 5.0 66 4-76 18-87 (347)
356 3e9n_A Putative short-chain de 69.7 16 0.00056 25.3 6.6 74 1-76 1-85 (245)
357 3gpi_A NAD-dependent epimerase 69.7 4.1 0.00014 29.0 3.5 63 5-74 3-71 (286)
358 1v3u_A Leukotriene B4 12- hydr 68.6 16 0.00055 26.7 6.6 31 4-36 145-177 (333)
359 1rjw_A ADH-HT, alcohol dehydro 68.4 8.4 0.00029 28.5 5.1 31 4-36 164-195 (339)
360 3m1a_A Putative dehydrogenase; 68.2 8.1 0.00028 27.5 4.8 75 1-76 1-89 (281)
361 3tpc_A Short chain alcohol deh 68.1 14 0.00049 25.8 6.1 71 2-76 4-91 (257)
362 3slg_A PBGP3 protein; structur 68.1 6.7 0.00023 29.0 4.5 66 4-76 23-101 (372)
363 3llv_A Exopolyphosphatase-rela 68.0 4.9 0.00017 25.6 3.3 64 5-75 6-79 (141)
364 3dqp_A Oxidoreductase YLBE; al 67.0 26 0.00089 23.6 8.2 65 7-76 2-73 (219)
365 2d8a_A PH0655, probable L-thre 66.7 7.1 0.00024 28.9 4.4 31 5-36 168-199 (348)
366 2c0c_A Zinc binding alcohol de 66.5 12 0.00042 27.9 5.7 31 4-36 163-195 (362)
367 3ehe_A UDP-glucose 4-epimerase 66.2 6.2 0.00021 28.4 3.9 62 7-75 3-72 (313)
368 3n74_A 3-ketoacyl-(acyl-carrie 66.1 12 0.00041 26.2 5.3 72 1-76 5-93 (261)
369 4a27_A Synaptic vesicle membra 65.3 12 0.00043 27.6 5.5 32 4-36 142-175 (349)
370 2aef_A Calcium-gated potassium 65.1 18 0.00062 25.0 6.1 64 5-75 9-80 (234)
371 3jyn_A Quinone oxidoreductase; 64.9 9.1 0.00031 28.1 4.6 31 4-36 140-172 (325)
372 3m6i_A L-arabinitol 4-dehydrog 64.7 21 0.00072 26.5 6.7 32 4-36 179-211 (363)
373 3un1_A Probable oxidoreductase 64.2 30 0.001 24.4 7.2 73 3-76 26-106 (260)
374 2a35_A Hypothetical protein PA 63.9 5 0.00017 27.0 2.8 69 1-76 1-75 (215)
375 1wly_A CAAR, 2-haloacrylate re 63.6 21 0.00072 26.1 6.4 31 4-36 145-177 (333)
376 1jvb_A NAD(H)-dependent alcoho 63.5 13 0.00044 27.5 5.3 32 4-36 170-203 (347)
377 3t4x_A Oxidoreductase, short c 63.4 26 0.0009 24.7 6.8 71 2-76 7-95 (267)
378 3zv4_A CIS-2,3-dihydrobiphenyl 61.9 19 0.00064 25.8 5.8 72 1-76 1-89 (281)
379 2hrz_A AGR_C_4963P, nucleoside 61.6 17 0.00057 26.3 5.5 67 4-76 13-96 (342)
380 3v8b_A Putative dehydrogenase, 61.1 32 0.0011 24.6 6.9 71 2-76 25-115 (283)
381 3two_A Mannitol dehydrogenase; 61.0 11 0.00039 27.8 4.6 31 4-36 176-207 (348)
382 1yb5_A Quinone oxidoreductase; 60.7 23 0.0008 26.3 6.3 30 5-36 171-202 (351)
383 2qrv_A DNA (cytosine-5)-methyl 60.4 17 0.00058 26.9 5.4 63 4-73 15-90 (295)
384 3o38_A Short chain dehydrogena 60.0 33 0.0011 23.9 6.8 70 3-76 20-111 (266)
385 1sb8_A WBPP; epimerase, 4-epim 59.8 18 0.0006 26.4 5.4 66 4-76 26-112 (352)
386 1uuf_A YAHK, zinc-type alcohol 59.8 14 0.00047 27.8 4.9 31 4-36 194-225 (369)
387 4dup_A Quinone oxidoreductase; 59.6 19 0.00065 26.7 5.6 31 4-36 167-199 (353)
388 3ius_A Uncharacterized conserv 59.6 5.7 0.0002 28.1 2.6 60 6-76 6-73 (286)
389 3f9i_A 3-oxoacyl-[acyl-carrier 59.5 21 0.00071 24.7 5.5 70 3-76 12-94 (249)
390 1h2b_A Alcohol dehydrogenase; 59.1 25 0.00085 26.1 6.2 31 5-36 187-218 (359)
391 2o23_A HADH2 protein; HSD17B10 59.0 29 0.00099 24.0 6.3 75 1-76 8-96 (265)
392 4iin_A 3-ketoacyl-acyl carrier 58.5 20 0.00068 25.3 5.4 72 1-76 25-117 (271)
393 3h7a_A Short chain dehydrogena 58.4 16 0.00055 25.7 4.8 74 2-76 4-93 (252)
394 2c20_A UDP-glucose 4-epimerase 58.2 19 0.00066 25.8 5.3 66 6-76 2-77 (330)
395 4dvj_A Putative zinc-dependent 57.9 17 0.00057 27.2 5.1 31 5-36 172-204 (363)
396 4e6p_A Probable sorbitol dehyd 57.5 29 0.00098 24.3 6.0 70 3-76 6-92 (259)
397 2v6g_A Progesterone 5-beta-red 56.7 47 0.0016 24.0 7.3 67 6-76 2-82 (364)
398 1id1_A Putative potassium chan 56.6 36 0.0012 21.7 6.6 64 5-75 3-80 (153)
399 4dzz_A Plasmid partitioning pr 56.2 40 0.0014 22.2 7.6 89 13-108 11-123 (206)
400 3ioy_A Short-chain dehydrogena 56.2 48 0.0016 24.2 7.2 69 4-76 7-97 (319)
401 3gaz_A Alcohol dehydrogenase s 55.9 28 0.00095 25.7 6.0 31 4-36 150-182 (343)
402 1qor_A Quinone oxidoreductase; 55.8 17 0.00058 26.5 4.7 30 5-36 141-172 (327)
403 3ppi_A 3-hydroxyacyl-COA dehyd 55.3 20 0.00068 25.4 4.9 70 3-73 28-110 (281)
404 3vrd_B FCCB subunit, flavocyto 54.9 16 0.00055 27.2 4.5 31 5-36 2-34 (401)
405 2vn8_A Reticulon-4-interacting 54.6 25 0.00086 26.2 5.5 31 4-36 183-215 (375)
406 4f3n_A Uncharacterized ACR, CO 54.6 8 0.00027 30.5 2.8 32 5-36 138-173 (432)
407 2e4g_A Tryptophan halogenase; 54.3 16 0.00054 29.0 4.6 36 1-36 21-58 (550)
408 4dqx_A Probable oxidoreductase 54.1 56 0.0019 23.2 9.1 75 1-76 23-111 (277)
409 3gaf_A 7-alpha-hydroxysteroid 53.9 53 0.0018 22.9 7.0 70 3-76 10-99 (256)
410 2vou_A 2,6-dihydroxypyridine h 53.6 15 0.0005 27.5 4.1 35 1-36 1-35 (397)
411 3m2p_A UDP-N-acetylglucosamine 53.6 54 0.0019 23.2 7.1 64 6-76 3-72 (311)
412 3rkr_A Short chain oxidoreduct 53.4 54 0.0019 22.8 7.3 73 3-76 27-116 (262)
413 3qvo_A NMRA family protein; st 53.3 51 0.0017 22.5 7.6 65 6-77 24-99 (236)
414 3iup_A Putative NADPH:quinone 53.0 11 0.00037 28.4 3.3 30 5-36 171-203 (379)
415 2q1w_A Putative nucleotide sug 52.9 29 0.00098 25.1 5.5 68 5-77 21-100 (333)
416 2gn4_A FLAA1 protein, UDP-GLCN 52.7 27 0.00094 25.7 5.4 68 3-77 19-102 (344)
417 3o26_A Salutaridine reductase; 52.5 34 0.0011 24.2 5.8 73 4-77 11-102 (311)
418 3awd_A GOX2181, putative polyo 52.4 51 0.0017 22.6 6.6 73 3-76 11-100 (260)
419 2j8z_A Quinone oxidoreductase; 52.3 28 0.00097 25.7 5.5 30 5-36 163-194 (354)
420 3r1i_A Short-chain type dehydr 52.2 28 0.00097 24.8 5.3 74 3-77 30-120 (276)
421 3uf0_A Short-chain dehydrogena 52.2 60 0.0021 23.0 7.3 74 3-77 29-117 (273)
422 3sju_A Keto reductase; short-c 51.5 55 0.0019 23.2 6.8 70 3-76 22-111 (279)
423 3pqe_A L-LDH, L-lactate dehydr 51.2 59 0.002 24.3 7.1 34 1-36 1-37 (326)
424 3me5_A Cytosine-specific methy 51.1 45 0.0015 26.5 6.7 47 5-54 88-147 (482)
425 3ksu_A 3-oxoacyl-acyl carrier 51.1 61 0.0021 22.7 8.0 71 2-76 8-101 (262)
426 3nzo_A UDP-N-acetylglucosamine 50.9 50 0.0017 24.9 6.8 68 5-77 35-123 (399)
427 1zkd_A DUF185; NESG, RPR58, st 50.9 14 0.00049 28.6 3.7 32 5-36 81-118 (387)
428 3ic5_A Putative saccharopine d 50.4 14 0.00046 22.1 2.9 63 5-75 5-78 (118)
429 4h0n_A DNMT2; SAH binding, tra 50.0 19 0.00066 27.0 4.2 62 6-73 4-76 (333)
430 2aqj_A Tryptophan halogenase, 49.9 18 0.00062 28.4 4.3 36 1-36 1-38 (538)
431 1xa0_A Putative NADPH dependen 49.3 27 0.00093 25.4 4.9 28 7-36 152-181 (328)
432 3imf_A Short chain dehydrogena 48.9 56 0.0019 22.7 6.4 73 3-76 4-93 (257)
433 4fn4_A Short chain dehydrogena 48.8 47 0.0016 23.8 6.0 72 1-76 3-94 (254)
434 3rft_A Uronate dehydrogenase; 48.7 46 0.0016 23.2 6.0 64 6-76 4-74 (267)
435 1piw_A Hypothetical zinc-type 48.3 21 0.00071 26.5 4.2 31 4-36 179-210 (360)
436 2x4g_A Nucleoside-diphosphate- 48.2 57 0.002 23.3 6.5 62 7-75 15-86 (342)
437 1hdo_A Biliverdin IX beta redu 48.1 55 0.0019 21.3 6.6 64 6-76 4-77 (206)
438 4g65_A TRK system potassium up 47.9 32 0.0011 26.9 5.3 64 4-73 234-307 (461)
439 3rih_A Short chain dehydrogena 47.9 73 0.0025 22.9 7.0 70 3-76 39-129 (293)
440 3vtz_A Glucose 1-dehydrogenase 47.6 45 0.0016 23.5 5.8 70 3-76 12-91 (269)
441 3v2g_A 3-oxoacyl-[acyl-carrier 47.5 65 0.0022 22.7 6.6 70 3-76 29-119 (271)
442 3fbg_A Putative arginate lyase 47.5 46 0.0016 24.4 6.0 31 4-36 150-182 (346)
443 1sby_A Alcohol dehydrogenase; 47.1 60 0.002 22.4 6.3 75 1-76 1-94 (254)
444 4dqv_A Probable peptide synthe 47.0 35 0.0012 26.5 5.4 66 4-76 72-177 (478)
445 3u5t_A 3-oxoacyl-[acyl-carrier 46.8 36 0.0012 24.1 5.2 72 1-76 23-115 (267)
446 3qv2_A 5-cytosine DNA methyltr 46.7 23 0.00079 26.5 4.2 66 1-73 6-83 (327)
447 2zbw_A Thioredoxin reductase; 46.2 16 0.00055 26.3 3.2 35 1-36 1-35 (335)
448 3svt_A Short-chain type dehydr 46.2 69 0.0023 22.6 6.6 71 2-76 8-101 (281)
449 3t8y_A CHEB, chemotaxis respon 46.0 33 0.0011 21.9 4.5 60 13-77 9-82 (164)
450 1yb1_A 17-beta-hydroxysteroid 46.0 74 0.0025 22.3 7.6 73 3-76 29-118 (272)
451 2h7i_A Enoyl-[acyl-carrier-pro 45.6 49 0.0017 23.2 5.7 74 3-76 5-97 (269)
452 2zb4_A Prostaglandin reductase 45.4 38 0.0013 25.0 5.2 29 6-36 162-193 (357)
453 3e8x_A Putative NAD-dependent 45.3 13 0.00044 25.6 2.4 68 3-77 19-95 (236)
454 4ggo_A Trans-2-enoyl-COA reduc 45.3 16 0.00055 28.6 3.1 71 3-76 48-150 (401)
455 3gvc_A Oxidoreductase, probabl 45.2 61 0.0021 23.0 6.2 70 4-77 28-114 (277)
456 3op4_A 3-oxoacyl-[acyl-carrier 45.1 26 0.0009 24.4 4.1 71 2-76 6-93 (248)
457 2h6e_A ADH-4, D-arabinose 1-de 44.8 22 0.00075 26.2 3.8 33 4-36 170-203 (344)
458 2pyx_A Tryptophan halogenase; 44.6 21 0.00072 28.0 3.8 34 3-36 5-49 (526)
459 1iz0_A Quinone oxidoreductase; 44.6 25 0.00085 25.3 4.0 31 4-36 125-157 (302)
460 2bll_A Protein YFBG; decarboxy 44.5 34 0.0012 24.5 4.7 63 7-76 2-77 (345)
461 3grp_A 3-oxoacyl-(acyl carrier 44.5 34 0.0012 24.2 4.7 73 3-76 25-111 (266)
462 4eso_A Putative oxidoreductase 44.4 50 0.0017 23.1 5.5 74 3-77 6-93 (255)
463 1fmc_A 7 alpha-hydroxysteroid 44.1 73 0.0025 21.7 6.6 73 3-76 9-98 (255)
464 3guy_A Short-chain dehydrogena 44.0 49 0.0017 22.5 5.4 68 6-76 2-82 (230)
465 2pzm_A Putative nucleotide sug 43.7 80 0.0028 22.6 6.7 69 4-77 19-99 (330)
466 3goh_A Alcohol dehydrogenase, 43.6 25 0.00085 25.5 3.9 31 4-36 142-173 (315)
467 1h5q_A NADP-dependent mannitol 43.3 71 0.0024 21.9 6.2 70 3-76 12-102 (265)
468 3ak4_A NADH-dependent quinucli 43.2 80 0.0027 21.9 8.0 73 3-76 10-96 (263)
469 3v2h_A D-beta-hydroxybutyrate 43.2 86 0.0029 22.2 7.2 70 3-76 23-114 (281)
470 4dmm_A 3-oxoacyl-[acyl-carrier 43.1 50 0.0017 23.3 5.4 72 2-77 25-117 (269)
471 3tjr_A Short chain dehydrogena 43.1 63 0.0022 23.2 6.0 73 3-76 29-118 (301)
472 3i4f_A 3-oxoacyl-[acyl-carrier 42.8 31 0.0011 24.0 4.2 71 4-75 6-94 (264)
473 3k9g_A PF-32 protein; ssgcid, 42.5 83 0.0028 21.8 7.3 33 4-36 25-62 (267)
474 4f6l_B AUSA reductase domain p 42.1 36 0.0012 26.5 4.8 67 5-77 150-242 (508)
475 3rwb_A TPLDH, pyridoxal 4-dehy 41.9 32 0.0011 23.9 4.1 73 3-76 4-90 (247)
476 3hn7_A UDP-N-acetylmuramate-L- 41.7 91 0.0031 24.7 7.2 68 4-82 18-97 (524)
477 3oig_A Enoyl-[acyl-carrier-pro 41.7 71 0.0024 22.1 6.0 71 2-76 4-97 (266)
478 3evn_A Oxidoreductase, GFO/IDH 41.4 53 0.0018 23.9 5.4 71 1-82 1-83 (329)
479 2g1u_A Hypothetical protein TM 41.4 32 0.0011 22.1 3.8 67 4-75 18-93 (155)
480 3ubt_Y Modification methylase 41.1 49 0.0017 24.0 5.2 55 7-72 2-67 (331)
481 2jl1_A Triphenylmethane reduct 40.8 44 0.0015 23.3 4.8 63 7-76 2-76 (287)
482 1y8q_A Ubiquitin-like 1 activa 40.6 53 0.0018 24.6 5.4 32 4-36 35-67 (346)
483 4egf_A L-xylulose reductase; s 40.5 36 0.0012 23.9 4.3 71 3-77 18-109 (266)
484 4ibo_A Gluconate dehydrogenase 40.5 31 0.0011 24.5 4.0 70 3-76 24-113 (271)
485 3mag_A VP39; methylated adenin 40.1 81 0.0028 23.7 6.2 65 4-72 60-136 (307)
486 3tzq_B Short-chain type dehydr 40.0 63 0.0021 22.7 5.5 71 3-77 9-96 (271)
487 3tfo_A Putative 3-oxoacyl-(acy 40.0 75 0.0026 22.4 5.9 73 3-76 2-91 (264)
488 1dhr_A Dihydropteridine reduct 39.9 88 0.003 21.4 7.2 72 4-76 6-86 (241)
489 4gmf_A Yersiniabactin biosynth 39.9 20 0.00067 27.4 2.9 33 4-36 6-38 (372)
490 2zcu_A Uncharacterized oxidore 39.8 58 0.002 22.6 5.3 61 8-75 2-74 (286)
491 2j3h_A NADP-dependent oxidored 39.8 32 0.0011 25.1 4.0 31 4-36 155-187 (345)
492 3hyw_A Sulfide-quinone reducta 39.7 37 0.0013 25.8 4.5 30 6-36 3-34 (430)
493 3cxt_A Dehydrogenase with diff 39.7 1E+02 0.0035 22.0 7.1 70 3-76 32-121 (291)
494 3f1l_A Uncharacterized oxidore 39.3 93 0.0032 21.5 6.4 69 4-76 11-102 (252)
495 1ej6_A Lambda2; icosahedral, n 39.1 30 0.001 30.8 4.1 61 3-72 820-888 (1289)
496 3h2s_A Putative NADH-flavin re 39.1 43 0.0015 22.3 4.4 63 7-76 2-72 (224)
497 3nix_A Flavoprotein/dehydrogen 38.9 27 0.00091 26.0 3.5 35 1-36 1-35 (421)
498 1xg5_A ARPG836; short chain de 38.8 98 0.0034 21.6 6.7 72 4-76 31-121 (279)
499 3ucx_A Short chain dehydrogena 38.8 97 0.0033 21.5 6.6 69 4-76 10-98 (264)
500 2b5w_A Glucose dehydrogenase; 38.5 45 0.0015 24.6 4.7 30 5-36 173-206 (357)
No 1
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.91 E-value=5.6e-24 Score=155.47 Aligned_cols=114 Identities=17% Similarity=0.267 Sum_probs=96.7
Q ss_pred EEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCC-CcEEEEecchHHHHHHHhhcCCCCCceeEE
Q 042171 7 KTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVD-HKINFIESEALSVLDQLLKDSENEVNFDYA 70 (125)
Q Consensus 7 ~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~-~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v 70 (125)
+|||||||+|+++++||++++++++|+++| .++. ++|+++.+|+.+.++.+. .++||+|
T Consensus 59 ~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~-----~~~fD~V 133 (221)
T 3dr5_A 59 GAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLA-----NDSYQLV 133 (221)
T ss_dssp EEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSC-----TTCEEEE
T ss_pred CEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhc-----CCCcCeE
Confidence 999999999999999999998789999999 5776 799999999999877642 4789999
Q ss_pred EEcCCCcCCHHHHhhh--------------C------CCC-CCcchHHHHHHHHHHhhcCCCeEEEEeecCCcccC
Q 042171 71 FMDADKDNYCNYMREQ--------------V------PDH-FRGSSKQAILDLNRSLVDDPCVQLSHVALGESVDI 125 (125)
Q Consensus 71 ~id~~~~~~~~~~~~~--------------~------~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~lp~~~G~~i 125 (125)
|+|+++.+|+.+++.. + .+. .+.....++++|++.+.++|++++++||+|||++|
T Consensus 134 ~~d~~~~~~~~~l~~~~~~LkpGG~lv~dn~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~gdGl~~ 209 (221)
T 3dr5_A 134 FGQVSPMDLKALVDAAWPLLRRGGALVLADALLDGTIADQTRKDRDTQAARDADEYIRSIEGAHVARLPLGAGLTV 209 (221)
T ss_dssp EECCCTTTHHHHHHHHHHHEEEEEEEEETTTTGGGTCSCSSCCCHHHHHHHHHHHHHTTCTTEEEEEESSTTCEEE
T ss_pred EEcCcHHHHHHHHHHHHHHcCCCcEEEEeCCCCCCcCCCCCCCChHHHHHHHHHHHHhhCCCeeEEEeeccchHHH
Confidence 9999999999888721 1 111 12236678999999999999999999999999974
No 2
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.90 E-value=9e-23 Score=150.78 Aligned_cols=121 Identities=36% Similarity=0.618 Sum_probs=99.3
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
++++|||||||+|++|++||++++++++|+++| .++.++|+++.+|+.+.++.+... +..++||
T Consensus 60 ~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~-~~~~~fD 138 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNE-GGEHQFD 138 (242)
T ss_dssp TCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHH-HCSSCEE
T ss_pred CcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhc-cCCCCEe
Confidence 578999999999999999999998789999999 466679999999999988765321 0136899
Q ss_pred EEEEcCCCcCCHHHHhhh--------------C------CC-CCCcchHHHHHHHHHHhhcCCCeEEEEeecCCcccC
Q 042171 69 YAFMDADKDNYCNYMREQ--------------V------PD-HFRGSSKQAILDLNRSLVDDPCVQLSHVALGESVDI 125 (125)
Q Consensus 69 ~v~id~~~~~~~~~~~~~--------------~------~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~~~G~~i 125 (125)
+||+|+++..|..+++.. + .+ .......+++++|++.|.++++|+++++|++||+.|
T Consensus 139 ~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d~~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~~dG~~~ 216 (242)
T 3r3h_A 139 FIFIDADKTNYLNYYELALKLVTPKGLIAIDNIFWDGKVIDPNDTSGQTREIKKLNQVIKNDSRVFVSLLAIADGMFL 216 (242)
T ss_dssp EEEEESCGGGHHHHHHHHHHHEEEEEEEEEECSSSSSCSSCTTCCCHHHHHHHHHHHHHHTCCSEEEEEESSSSCEEE
T ss_pred EEEEcCChHHhHHHHHHHHHhcCCCeEEEEECCccCCcccCccccChHHHHHHHHHHHHhhCCCEEEEEEEccCceEE
Confidence 999999998898888721 1 11 111246788999999999999999999999999974
No 3
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.88 E-value=6.5e-22 Score=145.40 Aligned_cols=123 Identities=50% Similarity=0.849 Sum_probs=99.0
Q ss_pred CCCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCce
Q 042171 3 LKLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNF 67 (125)
Q Consensus 3 ~~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~f 67 (125)
.++++|||||||+|+++++++++++++++|+++| .++.++|+++.+|+.+.++.+..+....++|
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 148 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSY 148 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCE
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCc
Confidence 3678999999999999999999998789999999 5776789999999999887663210013689
Q ss_pred eEEEEcCCCcCCHHHHhhh--------------C------CCC--CCc----chHHHHHHHHHHhhcCCCeEEEEeecCC
Q 042171 68 DYAFMDADKDNYCNYMREQ--------------V------PDH--FRG----SSKQAILDLNRSLVDDPCVQLSHVALGE 121 (125)
Q Consensus 68 D~v~id~~~~~~~~~~~~~--------------~------~~~--~~~----~~~~~~~~~~~~l~~~~~~~~~~lp~~~ 121 (125)
|+||+|+++..|..+++.. + ... ... ...+.+++|++.|.++++|.++++|++|
T Consensus 149 D~I~~d~~~~~~~~~l~~~~~~L~pGG~lv~d~~~~~g~~~~~~~~~~~~~r~~~~~i~~~~~~l~~~~~~~~~~lp~~d 228 (237)
T 3c3y_A 149 DFGFVDADKPNYIKYHERLMKLVKVGGIVAYDNTLWGGTVAQPESEVPDFMKENREAVIELNKLLAADPRIEIVHLPLGD 228 (237)
T ss_dssp EEEEECSCGGGHHHHHHHHHHHEEEEEEEEEECTTGGGGGGSCGGGSCGGGHHHHHHHHHHHHHHHHCTTEEEEEECSTT
T ss_pred CEEEECCchHHHHHHHHHHHHhcCCCeEEEEecCCcCCccCCCcccchhhHHHHHHHHHHHHHHHhcCCCeEEEEEEeCC
Confidence 9999999999999888821 1 000 000 1467899999999999999999999999
Q ss_pred cccC
Q 042171 122 SVDI 125 (125)
Q Consensus 122 G~~i 125 (125)
|+.|
T Consensus 229 G~~~ 232 (237)
T 3c3y_A 229 GITF 232 (237)
T ss_dssp CEEE
T ss_pred ceEE
Confidence 9864
No 4
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.86 E-value=6.3e-21 Score=141.23 Aligned_cols=123 Identities=47% Similarity=0.811 Sum_probs=98.2
Q ss_pred CCCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCce
Q 042171 3 LKLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNF 67 (125)
Q Consensus 3 ~~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~f 67 (125)
.++++|||||||+|+++++++++++++++|+++| .++.++|+++.+|+.+.++.+.......++|
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 157 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSY 157 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCB
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCE
Confidence 3678999999999999999999998789999999 5676789999999999887653210003689
Q ss_pred eEEEEcCCCcCCHHHHhhh--------------C--------CCCCCc-----chHHHHHHHHHHhhcCCCeEEEEeecC
Q 042171 68 DYAFMDADKDNYCNYMREQ--------------V--------PDHFRG-----SSKQAILDLNRSLVDDPCVQLSHVALG 120 (125)
Q Consensus 68 D~v~id~~~~~~~~~~~~~--------------~--------~~~~~~-----~~~~~~~~~~~~l~~~~~~~~~~lp~~ 120 (125)
|+||+|+++..|..+++.. + +..... ...+++++|++.|.+++++.++++|++
T Consensus 158 D~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d~~~~~g~v~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~lp~~ 237 (247)
T 1sui_A 158 DFIFVDADKDNYLNYHKRLIDLVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAVDPRIEICMLPVG 237 (247)
T ss_dssp SEEEECSCSTTHHHHHHHHHHHBCTTCCEEEECTTGGGGGGCCTTSCCCHHHHHHHHHHHHHHHHHHTCTTBCCEEECST
T ss_pred EEEEEcCchHHHHHHHHHHHHhCCCCeEEEEecCCcCCcccCCCccchhhhhhHHHHHHHHHHHHHhhCCCeEEEEEecC
Confidence 9999999998998888721 0 000011 135689999999999999999999999
Q ss_pred CcccC
Q 042171 121 ESVDI 125 (125)
Q Consensus 121 ~G~~i 125 (125)
||+.|
T Consensus 238 dG~~l 242 (247)
T 1sui_A 238 DGITI 242 (247)
T ss_dssp TCEEE
T ss_pred CccEE
Confidence 99864
No 5
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.86 E-value=7.2e-21 Score=139.16 Aligned_cols=121 Identities=39% Similarity=0.594 Sum_probs=98.1
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
++.+|||||||+|+++++++++++++++|+++| .++.++++++.+|+.+.++.+... ...++||
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~-~~~~~fD 150 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQG-KPLPEFD 150 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTS-SSCCCEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhc-CCCCCcC
Confidence 578999999999999999999998678999999 366678999999999887766321 0016899
Q ss_pred EEEEcCCCcCCHHHHhhh--------------C------CCC-CCcchHHHHHHHHHHhhcCCCeEEEEeecCCcccC
Q 042171 69 YAFMDADKDNYCNYMREQ--------------V------PDH-FRGSSKQAILDLNRSLVDDPCVQLSHVALGESVDI 125 (125)
Q Consensus 69 ~v~id~~~~~~~~~~~~~--------------~------~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~lp~~~G~~i 125 (125)
+||+|+.+..|..+++.. + .+. ......+.+++|++.|.++++++++++|++||+.+
T Consensus 151 ~V~~d~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~~dG~~~ 228 (232)
T 3cbg_A 151 LIFIDADKRNYPRYYEIGLNLLRRGGLMVIDNVLWHGKVTEVDPQEAQTQVLQQFNRDLAQDERVRISVIPLGDGMTL 228 (232)
T ss_dssp EEEECSCGGGHHHHHHHHHHTEEEEEEEEEECTTGGGGGGCSSCCSHHHHHHHHHHHHHTTCTTEEEEEECSBTCEEE
T ss_pred EEEECCCHHHHHHHHHHHHHHcCCCeEEEEeCCCcCCccCCcccCChHHHHHHHHHHHHhhCCCeEEEEEEcCCeEEE
Confidence 999999988888888721 0 000 11247788999999999999999999999999864
No 6
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.85 E-value=1.3e-20 Score=135.88 Aligned_cols=121 Identities=31% Similarity=0.508 Sum_probs=98.2
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
++.+|||||||+|++++++++.++++++|+++| .++.++++++++|+.+.++.+... ...++||
T Consensus 64 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~-~~~~~fD 142 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHA-GQAWQYD 142 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTT-TCTTCEE
T ss_pred CCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhc-cCCCCcc
Confidence 567999999999999999999998779999999 567778999999999887765321 0017899
Q ss_pred EEEEcCCCcCCHHHHhhh--------------C------C-CCCCcchHHHHHHHHHHhhcCCCeEEEEeecCCcccC
Q 042171 69 YAFMDADKDNYCNYMREQ--------------V------P-DHFRGSSKQAILDLNRSLVDDPCVQLSHVALGESVDI 125 (125)
Q Consensus 69 ~v~id~~~~~~~~~~~~~--------------~------~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~~~G~~i 125 (125)
+||+|+.+..+..+++.. + . ...+....+++++|++.+.++++++++++|+++|+.+
T Consensus 143 ~v~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~~dG~~~ 220 (225)
T 3tr6_A 143 LIYIDADKANTDLYYEESLKLLREGGLIAVDNVLRRGQVADEENQSENNQLIRLFNQKVYKDERVDMILIPIGDGLTL 220 (225)
T ss_dssp EEEECSCGGGHHHHHHHHHHHEEEEEEEEEECSSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEECSTTCEEE
T ss_pred EEEECCCHHHHHHHHHHHHHhcCCCcEEEEeCCCcCCcccCccccChHHHHHHHHHHHHhcCCCeEEEEEEcCCccEE
Confidence 999999988888887721 1 0 1112236778999999999999999999999999874
No 7
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.85 E-value=2.4e-20 Score=134.86 Aligned_cols=121 Identities=33% Similarity=0.547 Sum_probs=98.1
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
++.+|||||||+|+++++++++++++++|+++| .++.++++++.+|+.+.++.+.... ..++||
T Consensus 69 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~-~~~~~D 147 (229)
T 2avd_A 69 QAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAG-EAGTFD 147 (229)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTT-CTTCEE
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcC-CCCCcc
Confidence 578999999999999999999987678999999 4666799999999998877663210 016899
Q ss_pred EEEEcCCCcCCHHHHhhh--------------C------C-CCCCcchHHHHHHHHHHhhcCCCeEEEEeecCCcccC
Q 042171 69 YAFMDADKDNYCNYMREQ--------------V------P-DHFRGSSKQAILDLNRSLVDDPCVQLSHVALGESVDI 125 (125)
Q Consensus 69 ~v~id~~~~~~~~~~~~~--------------~------~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~~~G~~i 125 (125)
+||+|+.+..|..+++.. + . +.......+++++|++.+.++++++++++|++||+.|
T Consensus 148 ~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~~dGl~~ 225 (229)
T 2avd_A 148 VAVVDADKENCSAYYERCLQLLRPGGILAVLRVLWRGKVLQPPKGDVAAECVRNLNERIRRDVRVYISLLPLGDGLTL 225 (229)
T ss_dssp EEEECSCSTTHHHHHHHHHHHEEEEEEEEEECCSGGGGGGSCCTTCHHHHHHHHHHHHHHHCTTEEEEEECSTTCEEE
T ss_pred EEEECCCHHHHHHHHHHHHHHcCCCeEEEEECCCcCCcccCcccCChHHHHHHHHHHHHhhCCCEEEEEEecCCceEE
Confidence 999999988888888721 0 0 1112247889999999999999999999999999974
No 8
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.84 E-value=3e-20 Score=134.01 Aligned_cols=120 Identities=22% Similarity=0.366 Sum_probs=98.7
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
++.+|||||||+|+++++++++++++++|+++| .++.++++++.+|+.+.++.+... ...+||
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~--~~~~fD 135 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENE--KYEPFD 135 (223)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHT--TCCCCS
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhc--CCCCcC
Confidence 578999999999999999999998779999999 577778999999999887776432 126799
Q ss_pred EEEEcCCCcCCHHHHhhh---CC------------------CCCCcchHHHHHHHHHHhhcCCCeEEEEeec-----CCc
Q 042171 69 YAFMDADKDNYCNYMREQ---VP------------------DHFRGSSKQAILDLNRSLVDDPCVQLSHVAL-----GES 122 (125)
Q Consensus 69 ~v~id~~~~~~~~~~~~~---~~------------------~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~-----~~G 122 (125)
+||+|+.+..++.+++.. +. ........+++++|++.+.++++++++++|+ +||
T Consensus 136 ~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~~~dG 215 (223)
T 3duw_A 136 FIFIDADKQNNPAYFEWALKLSRPGTVIIGDNVVREGEVIDNTSNDPRVQGIRRFYELIAAEPRVSATALQTVGSKGYDG 215 (223)
T ss_dssp EEEECSCGGGHHHHHHHHHHTCCTTCEEEEESCSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETTEEEE
T ss_pred EEEEcCCcHHHHHHHHHHHHhcCCCcEEEEeCCCcCCcccCccccchHHHHHHHHHHHHhhCCCeEEEEEeccCCCCCCe
Confidence 999999988888888732 10 0111236788999999999999999999999 999
Q ss_pred ccC
Q 042171 123 VDI 125 (125)
Q Consensus 123 ~~i 125 (125)
+.+
T Consensus 216 ~~~ 218 (223)
T 3duw_A 216 FIM 218 (223)
T ss_dssp EEE
T ss_pred eEE
Confidence 864
No 9
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.84 E-value=2.3e-20 Score=136.36 Aligned_cols=115 Identities=23% Similarity=0.353 Sum_probs=95.5
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHH-HHhhcCCCCCce
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLD-QLLKDSENEVNF 67 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~-~~~~~~~~~~~f 67 (125)
++.+|||||||+|++++++++..+ +++|+++| .++.++++++.+|+.+.++ .+ .++|
T Consensus 71 ~~~~vLDiG~G~G~~~~~la~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~------~~~f 143 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQFASISD-DIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVN------DKVY 143 (232)
T ss_dssp TCCEEEEECCSSSHHHHHHHTTCT-TCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHT------TSCE
T ss_pred CCCEEEEEeCchhHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhc------cCCc
Confidence 578999999999999999999776 79999999 5676799999999998877 55 4789
Q ss_pred eEEEEcCCCcCCHHHHhhh--------------C------CCCCC------cchHHHHHHHHHHhhcCCCeEEEEeecCC
Q 042171 68 DYAFMDADKDNYCNYMREQ--------------V------PDHFR------GSSKQAILDLNRSLVDDPCVQLSHVALGE 121 (125)
Q Consensus 68 D~v~id~~~~~~~~~~~~~--------------~------~~~~~------~~~~~~~~~~~~~l~~~~~~~~~~lp~~~ 121 (125)
|+||+|+++..+..+++.. + .+... ....+++++|++.+.++++++++++|++|
T Consensus 144 D~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~d~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~~d 223 (232)
T 3ntv_A 144 DMIFIDAAKAQSKKFFEIYTPLLKHQGLVITDNVLYHGFVSDIGIVRSRNVRQMVKKVQDYNEWLIKQPGYTTNFLNIDD 223 (232)
T ss_dssp EEEEEETTSSSHHHHHHHHGGGEEEEEEEEEECTTGGGGGGCGGGGGCHHHHHHHHHHHHHHHHHHTCTTEEEEEECSTT
T ss_pred cEEEEcCcHHHHHHHHHHHHHhcCCCeEEEEeeCCcCccccCcccccchhhhHHHHHHHHHHHHHhcCCCeEEEEEEcCC
Confidence 9999999999998888732 1 00000 01356899999999999999999999999
Q ss_pred cccC
Q 042171 122 SVDI 125 (125)
Q Consensus 122 G~~i 125 (125)
|+.|
T Consensus 224 G~~i 227 (232)
T 3ntv_A 224 GLAI 227 (232)
T ss_dssp CEEE
T ss_pred ceEE
Confidence 9874
No 10
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.83 E-value=5.5e-20 Score=135.79 Aligned_cols=118 Identities=28% Similarity=0.470 Sum_probs=97.2
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
++.+|||||||+|+++++++++++++++|+++| .++.++|+++.+|+.+.++.+. ..++||
T Consensus 63 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~----~~~~fD 138 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLG----ECPAFD 138 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCC----SCCCCS
T ss_pred CCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcC----CCCCeE
Confidence 578999999999999999999998779999999 5777799999999999877651 135899
Q ss_pred EEEEcCCCcCCHHHHhhh---C-----------------C-CCCCcchHHHHHHHHHHhhcCCCeEEEEe-ecC----Cc
Q 042171 69 YAFMDADKDNYCNYMREQ---V-----------------P-DHFRGSSKQAILDLNRSLVDDPCVQLSHV-ALG----ES 122 (125)
Q Consensus 69 ~v~id~~~~~~~~~~~~~---~-----------------~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~l-p~~----~G 122 (125)
+||+|+.+..++.+++.. + . +..+....+++++|++.+.++++|+++++ |++ ||
T Consensus 139 ~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~~~~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~g~~~~DG 218 (248)
T 3tfw_A 139 LIFIDADKPNNPHYLRWALRYSRPGTLIIGDNVVRDGEVVNPQSADERVQGVRQFIEMMGAEPRLTATALQTVGTKGWDG 218 (248)
T ss_dssp EEEECSCGGGHHHHHHHHHHTCCTTCEEEEECCSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEEEECSTTCSEE
T ss_pred EEEECCchHHHHHHHHHHHHhcCCCeEEEEeCCCcCCcccCccccchHHHHHHHHHHHHhhCCCEEEEEeecCCCCCCCe
Confidence 999999998999888732 1 0 11112367889999999999999999998 776 99
Q ss_pred ccC
Q 042171 123 VDI 125 (125)
Q Consensus 123 ~~i 125 (125)
+.|
T Consensus 219 ~~i 221 (248)
T 3tfw_A 219 FTL 221 (248)
T ss_dssp EEE
T ss_pred eEE
Confidence 864
No 11
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.79 E-value=3.2e-18 Score=125.05 Aligned_cols=122 Identities=34% Similarity=0.476 Sum_probs=96.3
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhc--------
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKD-------- 60 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~-------- 60 (125)
++.+|||||||+|++++++++.++++++|+++| .++.++++++.+|+.+.++.+...
T Consensus 60 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~ 139 (239)
T 2hnk_A 60 GAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWAS 139 (239)
T ss_dssp TCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGGT
T ss_pred CcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhcccccccc
Confidence 567999999999999999999998678999999 456567999999999877755210
Q ss_pred -CCCC-CceeEEEEcCCCcCCHHHHhhh-----------CC----------CCCCcchHHHHHHHHHHhhcCCCeEEEEe
Q 042171 61 -SENE-VNFDYAFMDADKDNYCNYMREQ-----------VP----------DHFRGSSKQAILDLNRSLVDDPCVQLSHV 117 (125)
Q Consensus 61 -~~~~-~~fD~v~id~~~~~~~~~~~~~-----------~~----------~~~~~~~~~~~~~~~~~l~~~~~~~~~~l 117 (125)
.... ++||+||+++....++.+++.. +. +.........+++|++.+.+++++.++++
T Consensus 140 ~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (239)
T 2hnk_A 140 DFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPGGLLIADNVLWDGSVADLSHQEPSTVGIRKFNELVYNDSLVDVSLV 219 (239)
T ss_dssp TTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEECSSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEE
T ss_pred cccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCCeEEEEEccccCCcccCccccchHHHHHHHHHHHHhhCCCeEEEEE
Confidence 0001 6899999999888888777721 00 11112467889999999999999999999
Q ss_pred ecCCcccC
Q 042171 118 ALGESVDI 125 (125)
Q Consensus 118 p~~~G~~i 125 (125)
|+++|+.+
T Consensus 220 p~~~g~~~ 227 (239)
T 2hnk_A 220 PIADGVSL 227 (239)
T ss_dssp CSTTCEEE
T ss_pred EcCCceEe
Confidence 99999864
No 12
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.78 E-value=6.6e-19 Score=126.19 Aligned_cols=115 Identities=17% Similarity=0.185 Sum_probs=91.4
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
++.+|||||||+|+++++++++++++++|+++| .++.++++++.+|+.+.++.+ .+ ||
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~------~~-fD 128 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQ------RD-ID 128 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTC------CS-EE
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccC------CC-CC
Confidence 578999999999999999999987679999999 355568999999999876643 35 99
Q ss_pred EEEEcCCCcCCHHHHhhhC-----------CC--CC-------CcchHHHHHHHHHHhhcCCCeEEEEeecCCcccC
Q 042171 69 YAFMDADKDNYCNYMREQV-----------PD--HF-------RGSSKQAILDLNRSLVDDPCVQLSHVALGESVDI 125 (125)
Q Consensus 69 ~v~id~~~~~~~~~~~~~~-----------~~--~~-------~~~~~~~~~~~~~~l~~~~~~~~~~lp~~~G~~i 125 (125)
+||+|+.+..+..+++... .+ +. .....+.+++|++.+.+++++.++++|+++|+.+
T Consensus 129 ~v~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~G~~~ 205 (210)
T 3c3p_A 129 ILFMDCDVFNGADVLERMNRCLAKNALLIAVNALRRGSVAESHEDPETAALREFNHHLSRRRDFFTTIVPVGNGVLL 205 (210)
T ss_dssp EEEEETTTSCHHHHHHHHGGGEEEEEEEEEESSSSCC------------CCCHHHHHHTTCTTEEEEEECSTTCEEE
T ss_pred EEEEcCChhhhHHHHHHHHHhcCCCeEEEEECccccCcccCcccchHHHHHHHHHHHHhhCCCeEEEEEecCCceEE
Confidence 9999998888888887321 00 00 1125566899999999999999999999999864
No 13
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.76 E-value=1.2e-18 Score=125.93 Aligned_cols=121 Identities=16% Similarity=0.251 Sum_probs=92.5
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
++.+|||||||+|++++++|++++++++|+++| .++.++|+++.+|+.+.++.+.... ..++||
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~-~~~~fD 136 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKY-DVDTLD 136 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTS-CCCCCS
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhc-CCCceE
Confidence 578999999999999999999987789999999 4676789999999998877652110 116899
Q ss_pred EEEEcCCCcCCHHHHh---hh--CCCC----CCcchHHHHHHHHHHhhcCCCeEEEEee-------cCCcccC
Q 042171 69 YAFMDADKDNYCNYMR---EQ--VPDH----FRGSSKQAILDLNRSLVDDPCVQLSHVA-------LGESVDI 125 (125)
Q Consensus 69 ~v~id~~~~~~~~~~~---~~--~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~lp-------~~~G~~i 125 (125)
+||+|+.+..|.++++ .. +.+. ..+....+.++|++.++++++|+++.+| ++||+.+
T Consensus 137 ~V~~d~~~~~~~~~~~~~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~dG~~~ 209 (221)
T 3u81_A 137 MVFLDHWKDRYLPDTLLLEKCGLLRKGTVLLADNVIVPGTPDFLAYVRGSSSFECTHYSSYLEYMKVVDGLEK 209 (221)
T ss_dssp EEEECSCGGGHHHHHHHHHHTTCCCTTCEEEESCCCCCCCHHHHHHHHHCTTEEEEEEEEEETTTTEEEEEEE
T ss_pred EEEEcCCcccchHHHHHHHhccccCCCeEEEEeCCCCcchHHHHHHHhhCCCceEEEcccccccCCCCCceEE
Confidence 9999999888876543 11 1110 0111223358999999999999999999 7999864
No 14
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.67 E-value=1.9e-16 Score=114.98 Aligned_cols=117 Identities=23% Similarity=0.376 Sum_probs=85.6
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
++.+|||||||+|++++++++.+| +++|+++| .++.++++++.+|+.+.++.+. ..++||
T Consensus 54 ~~~~vLdiG~G~G~~~~~la~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~----~~~~fD 128 (233)
T 2gpy_A 54 APARILEIGTAIGYSAIRMAQALP-EATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLE----LYPLFD 128 (233)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHCT-TCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHT----TSCCEE
T ss_pred CCCEEEEecCCCcHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcc----cCCCcc
Confidence 467999999999999999999997 79999999 4666789999999998766542 136899
Q ss_pred EEEEcCCCcCCHHHHhhh-----------CCC--CC----------Cc--chHHHHHHHHHHhhcCCCeEEEEeecCCcc
Q 042171 69 YAFMDADKDNYCNYMREQ-----------VPD--HF----------RG--SSKQAILDLNRSLVDDPCVQLSHVALGESV 123 (125)
Q Consensus 69 ~v~id~~~~~~~~~~~~~-----------~~~--~~----------~~--~~~~~~~~~~~~l~~~~~~~~~~lp~~~G~ 123 (125)
+|+++.....+..+++.. +.. .. +. .....+++|++.+.++++|.++++|+++|+
T Consensus 129 ~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~dG~ 208 (233)
T 2gpy_A 129 VLFIDAAKGQYRRFFDMYSPMVRPGGLILSDNVLFRGLVAETDIEHKRHKQLATKIDTYNQWLLEHPQYDTRIFPVGDGI 208 (233)
T ss_dssp EEEEEGGGSCHHHHHHHHGGGEEEEEEEEEETTTC-------------------------CTTTTCTTEEEEEECSTTCE
T ss_pred EEEECCCHHHHHHHHHHHHHHcCCCeEEEEEcCCcCCccCCccccccchhHHHHHHHHHHHHHHhCCCeEEEEEEcCCeE
Confidence 999999887777777721 000 00 00 124668899999999999999999999998
Q ss_pred cC
Q 042171 124 DI 125 (125)
Q Consensus 124 ~i 125 (125)
.+
T Consensus 209 ~~ 210 (233)
T 2gpy_A 209 AI 210 (233)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 15
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=99.41 E-value=2.4e-13 Score=102.91 Aligned_cols=111 Identities=14% Similarity=0.151 Sum_probs=78.3
Q ss_pred CCCCEEEEEcCcccHHHHHHHhhCC----CCCEEEEEe--CC--------------------------------------
Q 042171 3 LKLKKTIEIGVFTGYSLFLTALTIP----EDGQITAID--AR-------------------------------------- 38 (125)
Q Consensus 3 ~~~~~vLeiG~g~G~~t~~la~~~~----~~~~v~~iD--~~-------------------------------------- 38 (125)
..|.+|||+||+.|+|+++||+.++ ++++|+++| .+
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 3588999999999999999998874 378999999 12
Q ss_pred -C-CCcEEEEecchHHHHHHHhhcCCCCCceeEEEEcCCC-cCCHHHHhhhC----------CCCCC--cchHHHHHHHH
Q 042171 39 -V-DHKINFIESEALSVLDQLLKDSENEVNFDYAFMDADK-DNYCNYMREQV----------PDHFR--GSSKQAILDLN 103 (125)
Q Consensus 39 -~-~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~id~~~-~~~~~~~~~~~----------~~~~~--~~~~~~~~~~~ 103 (125)
+ .++|++++|++.+.+|.+. .++|||||+|+++ ..+..+++... -+... ....+++++|+
T Consensus 185 gl~~~~I~li~Gda~etL~~~~-----~~~~d~vfIDaD~y~~~~~~Le~~~p~L~pGGiIv~DD~~~~~G~~~Av~Ef~ 259 (282)
T 2wk1_A 185 DLLDEQVRFLPGWFKDTLPTAP-----IDTLAVLRMDGDLYESTWDTLTNLYPKVSVGGYVIVDDYMMCPPCKDAVDEYR 259 (282)
T ss_dssp TCCSTTEEEEESCHHHHSTTCC-----CCCEEEEEECCCSHHHHHHHHHHHGGGEEEEEEEEESSCTTCHHHHHHHHHHH
T ss_pred CCCcCceEEEEeCHHHHHhhCC-----CCCEEEEEEcCCccccHHHHHHHHHhhcCCCEEEEEcCCCCCHHHHHHHHHHH
Confidence 1 2789999999999988752 4689999999997 34556666321 12111 11455555555
Q ss_pred HHhhcCCCeEEEEeecCCc
Q 042171 104 RSLVDDPCVQLSHVALGES 122 (125)
Q Consensus 104 ~~l~~~~~~~~~~lp~~~G 122 (125)
+. .+++..++++..+
T Consensus 260 ~~----~~i~~~i~~~~~~ 274 (282)
T 2wk1_A 260 AK----FDIADELITIDRD 274 (282)
T ss_dssp HH----TTCCSCCEECSSS
T ss_pred Hh----cCCceEEEEecCE
Confidence 44 4566677777643
No 16
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=99.37 E-value=7.6e-13 Score=95.89 Aligned_cols=107 Identities=11% Similarity=0.078 Sum_probs=72.5
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCC--CCcEEEEecchHHH-------------
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARV--DHKINFIESEALSV------------- 53 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~--~~~i~~~~gd~~~~------------- 53 (125)
++++|||||| ||||+|||+. + +++|++|| +++ .++|+++.||+.+.
T Consensus 30 ~a~~VLEiGt--GySTl~lA~~-~-~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~ 105 (202)
T 3cvo_A 30 EAEVILEYGS--GGSTVVAAEL-P-GKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWR 105 (202)
T ss_dssp HCSEEEEESC--SHHHHHHHTS-T-TCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGG
T ss_pred CCCEEEEECc--hHHHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhh
Confidence 5789999998 7999999994 4 79999999 677 78999999997643
Q ss_pred -HHHHhhc---CCCCCceeEEEEcCCCcCCHHHHhhh----------CCCC-CCcchHHHHHHHHHHhhcCCCeEEEE
Q 042171 54 -LDQLLKD---SENEVNFDYAFMDADKDNYCNYMREQ----------VPDH-FRGSSKQAILDLNRSLVDDPCVQLSH 116 (125)
Q Consensus 54 -l~~~~~~---~~~~~~fD~v~id~~~~~~~~~~~~~----------~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~ 116 (125)
++.+..+ ....++||+||+|+.++. .++... +-++ .....-..+.+|...+..+++.-.-.
T Consensus 106 ~l~~~~~~i~~~~~~~~fDlIfIDg~k~~--~~~~~~l~~l~~GG~Iv~DNv~~r~~y~~v~~~~~~~~~~~~~a~f~ 181 (202)
T 3cvo_A 106 SYPDYPLAVWRTEGFRHPDVVLVDGRFRV--GCALATAFSITRPVTLLFDDYSQRRWQHQVEEFLGAPLMIGRLAAFQ 181 (202)
T ss_dssp GTTHHHHGGGGCTTCCCCSEEEECSSSHH--HHHHHHHHHCSSCEEEEETTGGGCSSGGGGHHHHCCCEEETTEEEEE
T ss_pred hHHHHhhhhhccccCCCCCEEEEeCCCch--hHHHHHHHhcCCCeEEEEeCCcCCcchHHHHHHHhHHhhcCceEEEE
Confidence 3322110 011378999999999863 333311 1122 11124455788888887777744433
No 17
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.36 E-value=1.4e-12 Score=95.66 Aligned_cols=77 Identities=25% Similarity=0.358 Sum_probs=61.3
Q ss_pred CCCEEEEEcCcccHHHHHHHhh---CCCCCEEEEEe---------CCCCCcEEEEecchHHH--HHHHhhcCCCCCceeE
Q 042171 4 KLKKTIEIGVFTGYSLFLTALT---IPEDGQITAID---------ARVDHKINFIESEALSV--LDQLLKDSENEVNFDY 69 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~---~~~~~~v~~iD---------~~~~~~i~~~~gd~~~~--l~~~~~~~~~~~~fD~ 69 (125)
++.+|||||||+|++|++|++. +.++++|++|| .++.++|+++++|+.+. ++.+ ...+||+
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~~~~v~~~~gD~~~~~~l~~~-----~~~~fD~ 155 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASDMENITLHQGDCSDLTTFEHL-----REMAHPL 155 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGGCTTEEEEECCSSCSGGGGGG-----SSSCSSE
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhccCCceEEEECcchhHHHHHhh-----ccCCCCE
Confidence 4679999999999999999998 44479999999 12346899999999875 4433 1347999
Q ss_pred EEEcCCCcCCHHHHhh
Q 042171 70 AFMDADKDNYCNYMRE 85 (125)
Q Consensus 70 v~id~~~~~~~~~~~~ 85 (125)
|++|+.+..++.++..
T Consensus 156 I~~d~~~~~~~~~l~~ 171 (236)
T 2bm8_A 156 IFIDNAHANTFNIMKW 171 (236)
T ss_dssp EEEESSCSSHHHHHHH
T ss_pred EEECCchHhHHHHHHH
Confidence 9999998777777763
No 18
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.30 E-value=1.3e-11 Score=94.40 Aligned_cols=111 Identities=14% Similarity=0.105 Sum_probs=79.4
Q ss_pred CCCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe------------C-----CC-CCcEEEEecchHHHHHHHhhcCCCC
Q 042171 3 LKLKKTIEIGVFTGYSLFLTALTIPEDGQITAID------------A-----RV-DHKINFIESEALSVLDQLLKDSENE 64 (125)
Q Consensus 3 ~~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD------------~-----~~-~~~i~~~~gd~~~~l~~~~~~~~~~ 64 (125)
.++++|||||||+|.++.++++..+ ..+|+++| . ++ .++++++.+|+.+.++.. .
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~------~ 179 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHES-VEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNH------K 179 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTT-CCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHC------T
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhc------C
Confidence 3578999999999999999998755 68999999 1 22 468999999999877642 4
Q ss_pred CceeEEEEcCCCc------CC-HHHHhhh-----------C-C--CCCCcchHHHHHHHHHHhhcCCCeEEEEeecC
Q 042171 65 VNFDYAFMDADKD------NY-CNYMREQ-----------V-P--DHFRGSSKQAILDLNRSLVDDPCVQLSHVALG 120 (125)
Q Consensus 65 ~~fD~v~id~~~~------~~-~~~~~~~-----------~-~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~~ 120 (125)
++||+|++|.... .| ..+++.. + . .+........+.++++.+..+.++..+.+|+.
T Consensus 180 ~~fD~Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~vF~~v~~~~~~iP~~ 256 (314)
T 2b2c_A 180 NEFDVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQGESVWLHLPLIAHLVAFNRKIFPAVTYAQSIVSTY 256 (314)
T ss_dssp TCEEEEEECCC-------------HHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHHHCSEEEEEEEECTTS
T ss_pred CCceEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEECCCcccCHHHHHHHHHHHHHHCCcceEEEEEecCc
Confidence 7899999998432 23 4455521 0 1 11122356678888888888888888888884
No 19
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.25 E-value=3e-11 Score=91.91 Aligned_cols=111 Identities=12% Similarity=0.063 Sum_probs=81.1
Q ss_pred CCCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe------------C-----CC-CCcEEEEecchHHHHHHHhhcCCCC
Q 042171 3 LKLKKTIEIGVFTGYSLFLTALTIPEDGQITAID------------A-----RV-DHKINFIESEALSVLDQLLKDSENE 64 (125)
Q Consensus 3 ~~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD------------~-----~~-~~~i~~~~gd~~~~l~~~~~~~~~~ 64 (125)
.++++|||||||+|..+.++++..+ ..+|+++| . ++ .++++++.+|+.+.++.. .
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~------~ 166 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPS-VESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQN------Q 166 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTT-CCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTC------S
T ss_pred CCCCEEEEECCCchHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhC------C
Confidence 3678999999999999999998754 68999999 1 22 468999999999877642 4
Q ss_pred CceeEEEEcCCCcC-------CHHHHhhh---C-----------CCCCCcchHHHHHHHHHHhhcCCCeEEEEeecC
Q 042171 65 VNFDYAFMDADKDN-------YCNYMREQ---V-----------PDHFRGSSKQAILDLNRSLVDDPCVQLSHVALG 120 (125)
Q Consensus 65 ~~fD~v~id~~~~~-------~~~~~~~~---~-----------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~~ 120 (125)
++||+|++|..... +..+++.. + ..+......+.++++++.+..+.++..+.+|+-
T Consensus 167 ~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~f~~v~~~~~~vP~~ 243 (304)
T 2o07_A 167 DAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGECQWLHLDLIKEMRQFCQSLFPVVAYAYCTIPTY 243 (304)
T ss_dssp SCEEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEEECTTTCHHHHHHHHHHHHHHCSEEEEEEEECTTS
T ss_pred CCceEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCCcccchHHHHHHHHHHHHhCCCceeEEEEeccc
Confidence 78999999987532 23445421 0 111111256778999999998888888888874
No 20
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.18 E-value=1.2e-10 Score=88.80 Aligned_cols=113 Identities=12% Similarity=0.043 Sum_probs=80.2
Q ss_pred CCCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe------------C-----C-C-CCcEEEEecchHHHHHHHhhcCCC
Q 042171 3 LKLKKTIEIGVFTGYSLFLTALTIPEDGQITAID------------A-----R-V-DHKINFIESEALSVLDQLLKDSEN 63 (125)
Q Consensus 3 ~~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD------------~-----~-~-~~~i~~~~gd~~~~l~~~~~~~~~ 63 (125)
.++++|||||||+|..+..+++..+ ..+|+++| . + + .++++++.+|+.+.++..
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~------ 148 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPT-VEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERT------ 148 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTT-CCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHC------
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCC-CCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhc------
Confidence 3578999999999999999998755 68999999 1 1 2 468999999999876652
Q ss_pred CCceeEEEEcCCCcC----------CHHHHhhh---C-----------CCC-CCcchHHHHHHHHHHhhcCCCeEEEEee
Q 042171 64 EVNFDYAFMDADKDN----------YCNYMREQ---V-----------PDH-FRGSSKQAILDLNRSLVDDPCVQLSHVA 118 (125)
Q Consensus 64 ~~~fD~v~id~~~~~----------~~~~~~~~---~-----------~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~lp 118 (125)
.++||+|++|...+. ...+++.+ + ... ......+.+.+..+.+..+..+..+.+|
T Consensus 149 ~~~fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vP 228 (314)
T 1uir_A 149 EERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTGMILLTHHRVHPVVHRTVREAFRYVRSYKNHIP 228 (314)
T ss_dssp CCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEEECC---CHHHHHHHHHHTTCSEEEEEEEEEG
T ss_pred CCCccEEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEccCccccCHHHHHHHHHHHHHHCCceEEEEEecC
Confidence 578999999987644 34555521 0 011 1112555666666666666667777788
Q ss_pred cCCc
Q 042171 119 LGES 122 (125)
Q Consensus 119 ~~~G 122 (125)
..+|
T Consensus 229 ~~~g 232 (314)
T 1uir_A 229 GFFL 232 (314)
T ss_dssp GGTE
T ss_pred CCCC
Confidence 8776
No 21
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.14 E-value=2.8e-10 Score=85.30 Aligned_cols=110 Identities=12% Similarity=0.063 Sum_probs=77.6
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe------------C----CC--------CCcEEEEecchHHHHHHHhh
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID------------A----RV--------DHKINFIESEALSVLDQLLK 59 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD------------~----~~--------~~~i~~~~gd~~~~l~~~~~ 59 (125)
++++|||||||+|..+..+++. + ..+|+++| . ++ .++++++.+|+.+.++.
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~-~-~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~--- 149 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQH-D-VDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN--- 149 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTS-C-CSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH---
T ss_pred CCCeEEEEcCCcCHHHHHHHhC-C-CCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcc---
Confidence 5789999999999999999998 5 78999999 2 33 46899999999987654
Q ss_pred cCCCCCceeEEEEcCCCc------C-CHHHHhhh---C-----------CCCCCcchHHHHHHHHHHhhcCCCeEEEEee
Q 042171 60 DSENEVNFDYAFMDADKD------N-YCNYMREQ---V-----------PDHFRGSSKQAILDLNRSLVDDPCVQLSHVA 118 (125)
Q Consensus 60 ~~~~~~~fD~v~id~~~~------~-~~~~~~~~---~-----------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp 118 (125)
.++||+|++|.... . ...+++.. + .........+.+.++.+.+..+..+..+.+|
T Consensus 150 ----~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~f~~v~~~~~~vP 225 (281)
T 1mjf_A 150 ----NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAGSVYLFTDELISAYKEMKKVFDRVYYYSFPVI 225 (281)
T ss_dssp ----CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEEEETTTSHHHHHHHHHHHHHHCSEEEEEEECCT
T ss_pred ----cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHHCCceEEEEEecC
Confidence 26799999998632 1 24555521 1 0111112455566666666666666667788
Q ss_pred cCCc
Q 042171 119 LGES 122 (125)
Q Consensus 119 ~~~G 122 (125)
..+|
T Consensus 226 ~~~g 229 (281)
T 1mjf_A 226 GYAS 229 (281)
T ss_dssp TSSS
T ss_pred CCCc
Confidence 8766
No 22
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.10 E-value=3.6e-10 Score=78.11 Aligned_cols=63 Identities=14% Similarity=0.238 Sum_probs=52.6
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
+..+|||+|||+|..++.+++. + ..+|+++| .++.++++++.+|+.+.++.. .++||
T Consensus 31 ~~~~vLDlGcG~G~~~~~l~~~-~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~------~~~fD 102 (177)
T 2esr_A 31 NGGRVLDLFAGSGGLAIEAVSR-G-MSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCL------TGRFD 102 (177)
T ss_dssp CSCEEEEETCTTCHHHHHHHHT-T-CCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHB------CSCEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHc-C-CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhh------cCCCC
Confidence 5679999999999999999987 4 57999999 345568999999999876653 46799
Q ss_pred EEEEcC
Q 042171 69 YAFMDA 74 (125)
Q Consensus 69 ~v~id~ 74 (125)
+|+++.
T Consensus 103 ~i~~~~ 108 (177)
T 2esr_A 103 LVFLDP 108 (177)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 999864
No 23
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.08 E-value=1.8e-10 Score=80.90 Aligned_cols=65 Identities=9% Similarity=0.175 Sum_probs=53.7
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
+..+|||+|||+|..++.+++.+++.++++++| .++.++++++.+|+.+..+.. .++||
T Consensus 22 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~------~~~fD 95 (197)
T 3eey_A 22 EGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYI------DCPVK 95 (197)
T ss_dssp TTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTC------CSCEE
T ss_pred CCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhc------cCCce
Confidence 346999999999999999999985578999999 455578999999997763322 47899
Q ss_pred EEEEcC
Q 042171 69 YAFMDA 74 (125)
Q Consensus 69 ~v~id~ 74 (125)
+|+++.
T Consensus 96 ~v~~~~ 101 (197)
T 3eey_A 96 AVMFNL 101 (197)
T ss_dssp EEEEEE
T ss_pred EEEEcC
Confidence 999875
No 24
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.07 E-value=2.6e-10 Score=83.25 Aligned_cols=67 Identities=18% Similarity=0.085 Sum_probs=54.4
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe-------------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEE
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID-------------ARVDHKINFIESEALSVLDQLLKDSENEVNFDYA 70 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD-------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v 70 (125)
+..+|||||||+|+++.++++..+ .++++|| .....+++++.+++.+.++.+ ++++||.|
T Consensus 60 ~G~rVLdiG~G~G~~~~~~~~~~~--~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~-----~~~~FD~i 132 (236)
T 3orh_A 60 KGGRVLEVGFGMAIAASKVQEAPI--DEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTL-----PDGHFDGI 132 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHTTSCE--EEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGS-----CTTCEEEE
T ss_pred CCCeEEEECCCccHHHHHHHHhCC--cEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccc-----cccCCceE
Confidence 456999999999999999998754 6899999 233467999999999886655 26789999
Q ss_pred EEcCCCc
Q 042171 71 FMDADKD 77 (125)
Q Consensus 71 ~id~~~~ 77 (125)
+.|....
T Consensus 133 ~~D~~~~ 139 (236)
T 3orh_A 133 LYDTYPL 139 (236)
T ss_dssp EECCCCC
T ss_pred EEeeeec
Confidence 9997643
No 25
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.06 E-value=3.5e-10 Score=80.00 Aligned_cols=73 Identities=16% Similarity=0.176 Sum_probs=59.7
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
+..+|||||||+|..++.+++..+ .++|+++| .++ ++++++.+|+.+.++. ..+||
T Consensus 40 ~~~~vLDiG~G~G~~~~~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~-------~~~~D 110 (204)
T 3e05_A 40 DDLVMWDIGAGSASVSIEASNLMP-NGRIFALERNPQYLGFIRDNLKKFVA-RNVTLVEAFAPEGLDD-------LPDPD 110 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHCT-TSEEEEEECCHHHHHHHHHHHHHHTC-TTEEEEECCTTTTCTT-------SCCCS
T ss_pred CCCEEEEECCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeCChhhhhhc-------CCCCC
Confidence 456999999999999999999976 79999999 345 6899999999766443 36799
Q ss_pred EEEEcCCCcCCHHHHhh
Q 042171 69 YAFMDADKDNYCNYMRE 85 (125)
Q Consensus 69 ~v~id~~~~~~~~~~~~ 85 (125)
+|+++.....+..+++.
T Consensus 111 ~i~~~~~~~~~~~~l~~ 127 (204)
T 3e05_A 111 RVFIGGSGGMLEEIIDA 127 (204)
T ss_dssp EEEESCCTTCHHHHHHH
T ss_pred EEEECCCCcCHHHHHHH
Confidence 99999876666666663
No 26
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.06 E-value=2.3e-10 Score=84.01 Aligned_cols=73 Identities=8% Similarity=0.006 Sum_probs=56.2
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
+..+|||||||+|+.++.+++..+ .++|+++| .++.++|+++.+|+.+.++. ..+||
T Consensus 15 ~g~~VlDIGtGsG~l~i~la~~~~-~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~-------~~~~D 86 (225)
T 3kr9_A 15 QGAILLDVGSDHAYLPIELVERGQ-IKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEE-------TDQVS 86 (225)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTS-EEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG-------GGCCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhccc-------CcCCC
Confidence 456899999999999999999765 68999999 67878999999999876542 23699
Q ss_pred EEEEcCCCc-CCHHHHh
Q 042171 69 YAFMDADKD-NYCNYMR 84 (125)
Q Consensus 69 ~v~id~~~~-~~~~~~~ 84 (125)
.|++.+... .....++
T Consensus 87 ~IviaG~Gg~~i~~Il~ 103 (225)
T 3kr9_A 87 VITIAGMGGRLIARILE 103 (225)
T ss_dssp EEEEEEECHHHHHHHHH
T ss_pred EEEEcCCChHHHHHHHH
Confidence 999754322 2344444
No 27
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.05 E-value=8.9e-10 Score=79.79 Aligned_cols=64 Identities=20% Similarity=0.309 Sum_probs=54.1
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
...+|||||||+|.+++.+|+..| +.+|++|| .++ .+++++.+|+.+.++... +.++||
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p-~~~v~giD~s~~~l~~a~~~~~~~~l-~nv~~~~~Da~~~l~~~~----~~~~~d 107 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRP-EQDFLGIEVHSPGVGACLASAHEEGL-SNLRVMCHDAVEVLHKMI----PDNSLR 107 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCT-TSEEEEECSCHHHHHHHHHHHHHTTC-SSEEEECSCHHHHHHHHS----CTTCEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCC-CCeEEEEEecHHHHHHHHHHHHHhCC-CcEEEEECCHHHHHHHHc----CCCChh
Confidence 457899999999999999999987 78999999 345 579999999999877532 257899
Q ss_pred EEEEc
Q 042171 69 YAFMD 73 (125)
Q Consensus 69 ~v~id 73 (125)
.|++.
T Consensus 108 ~v~~~ 112 (218)
T 3dxy_A 108 MVQLF 112 (218)
T ss_dssp EEEEE
T ss_pred eEEEe
Confidence 99985
No 28
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.03 E-value=3.4e-10 Score=83.34 Aligned_cols=63 Identities=16% Similarity=0.098 Sum_probs=52.4
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
+..+|||||||+|+.++.+++..+ ..+|+++| .++.++|+++.+|+.+.++. .++||
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~~-~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~-------~~~~D 92 (230)
T 3lec_A 21 KGARLLDVGSDHAYLPIFLLQMGY-CDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEE-------ADNID 92 (230)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTC-EEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG-------GGCCC
T ss_pred CCCEEEEECCchHHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhcccc-------ccccC
Confidence 456899999999999999999755 67999999 67888999999999887432 24799
Q ss_pred EEEEcC
Q 042171 69 YAFMDA 74 (125)
Q Consensus 69 ~v~id~ 74 (125)
.|++.+
T Consensus 93 ~IviaG 98 (230)
T 3lec_A 93 TITICG 98 (230)
T ss_dssp EEEEEE
T ss_pred EEEEeC
Confidence 998743
No 29
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.03 E-value=2.3e-09 Score=75.03 Aligned_cols=66 Identities=8% Similarity=0.012 Sum_probs=53.1
Q ss_pred CCCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCce
Q 042171 3 LKLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNF 67 (125)
Q Consensus 3 ~~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~f 67 (125)
.+..+|||+|||+|..++.+++. + ..+|+++| .++ ++++++++|+.+.++.+ ..++|
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~-~-~~~v~~vD~~~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~-----~~~~f 114 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSR-G-AASVLFVESDQRSAAVIARNIEALGL-SGATLRRGAVAAVVAAG-----TTSPV 114 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT-T-CSEEEEEECCHHHHHHHHHHHHHHTC-SCEEEEESCHHHHHHHC-----CSSCC
T ss_pred CCCCEEEEeCCCcCHHHHHHHHC-C-CCeEEEEECCHHHHHHHHHHHHHcCC-CceEEEEccHHHHHhhc-----cCCCc
Confidence 35679999999999999988874 3 56899999 345 68999999999886654 14789
Q ss_pred eEEEEcCCC
Q 042171 68 DYAFMDADK 76 (125)
Q Consensus 68 D~v~id~~~ 76 (125)
|+|++|...
T Consensus 115 D~i~~~~p~ 123 (189)
T 3p9n_A 115 DLVLADPPY 123 (189)
T ss_dssp SEEEECCCT
T ss_pred cEEEECCCC
Confidence 999997553
No 30
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.02 E-value=6.6e-10 Score=82.02 Aligned_cols=74 Identities=11% Similarity=0.144 Sum_probs=56.6
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
+..+|||||||+|+.++.+|...| +++|+++| .++ .+|+++++|+.+..+.-. ..++||
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~l-~~v~~~~~d~~~~~~~~~----~~~~fD 153 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIVRP-ELELVLVDATRKKVAFVERAIEVLGL-KGARALWGRAEVLAREAG----HREAYA 153 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHHCT-TCEEEEEESCHHHHHHHHHHHHHHTC-SSEEEEECCHHHHTTSTT----TTTCEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHhCC-CceEEEECcHHHhhcccc----cCCCce
Confidence 467999999999999999999887 79999999 355 359999999987632100 137899
Q ss_pred EEEEcCCCcCCHHHHh
Q 042171 69 YAFMDADKDNYCNYMR 84 (125)
Q Consensus 69 ~v~id~~~~~~~~~~~ 84 (125)
+|++.+.. ....+++
T Consensus 154 ~I~s~a~~-~~~~ll~ 168 (249)
T 3g89_A 154 RAVARAVA-PLCVLSE 168 (249)
T ss_dssp EEEEESSC-CHHHHHH
T ss_pred EEEECCcC-CHHHHHH
Confidence 99997653 3445555
No 31
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.02 E-value=4.4e-10 Score=83.46 Aligned_cols=62 Identities=15% Similarity=0.210 Sum_probs=51.6
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
+..+|||||||+|+.++.+++..+ ..+|+++| .++.++|+++.+|+.+.++. ..+||
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~~-~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~-------~~~~D 92 (244)
T 3gnl_A 21 KNERIADIGSDHAYLPCFAVKNQT-ASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEK-------KDAID 92 (244)
T ss_dssp SSEEEEEETCSTTHHHHHHHHTTS-EEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG-------GGCCC
T ss_pred CCCEEEEECCccHHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCc-------ccccc
Confidence 456899999999999999999755 67999999 67888999999999876432 23699
Q ss_pred EEEEc
Q 042171 69 YAFMD 73 (125)
Q Consensus 69 ~v~id 73 (125)
.|++.
T Consensus 93 ~Ivia 97 (244)
T 3gnl_A 93 TIVIA 97 (244)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99874
No 32
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.01 E-value=6.1e-10 Score=77.44 Aligned_cols=60 Identities=12% Similarity=0.100 Sum_probs=48.9
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
+..+|||+|||+|..++.+++. +++|+++| .++ +++++++++..+. +.+ ..++||
T Consensus 22 ~~~~vLDiGcG~G~~~~~la~~---~~~v~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~~~~~l-~~~-----~~~~fD 91 (185)
T 3mti_A 22 DESIVVDATMGNGNDTAFLAGL---SKKVYAFDVQEQALGKTSQRLSDLGI-ENTELILDGHENL-DHY-----VREPIR 91 (185)
T ss_dssp TTCEEEESCCTTSHHHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHHTC-CCEEEEESCGGGG-GGT-----CCSCEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEeCcHHHH-Hhh-----ccCCcC
Confidence 4579999999999999999987 68999999 355 7899999877654 222 147899
Q ss_pred EEEEc
Q 042171 69 YAFMD 73 (125)
Q Consensus 69 ~v~id 73 (125)
+|+++
T Consensus 92 ~v~~~ 96 (185)
T 3mti_A 92 AAIFN 96 (185)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99987
No 33
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.01 E-value=8.4e-10 Score=84.07 Aligned_cols=69 Identities=16% Similarity=0.175 Sum_probs=54.1
Q ss_pred CCCEEEEEcCcccHHH-HHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCce
Q 042171 4 KLKKTIEIGVFTGYSL-FLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNF 67 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t-~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~f 67 (125)
++.+|||||||+|..+ +.+|+. + +++|+++| .++ ++++++++|+.+. + .++|
T Consensus 122 ~g~rVLDIGcG~G~~ta~~lA~~-~-ga~V~gIDis~~~l~~Ar~~~~~~gl-~~v~~v~gDa~~l-~--------d~~F 189 (298)
T 3fpf_A 122 RGERAVFIGGGPLPLTGILLSHV-Y-GMRVNVVEIEPDIAELSRKVIEGLGV-DGVNVITGDETVI-D--------GLEF 189 (298)
T ss_dssp TTCEEEEECCCSSCHHHHHHHHT-T-CCEEEEEESSHHHHHHHHHHHHHHTC-CSEEEEESCGGGG-G--------GCCC
T ss_pred CcCEEEEECCCccHHHHHHHHHc-c-CCEEEEEECCHHHHHHHHHHHHhcCC-CCeEEEECchhhC-C--------CCCc
Confidence 5679999999998654 666654 4 79999999 467 8999999999874 3 3789
Q ss_pred eEEEEcCCCcCCHHHHh
Q 042171 68 DYAFMDADKDNYCNYMR 84 (125)
Q Consensus 68 D~v~id~~~~~~~~~~~ 84 (125)
|+||+++........++
T Consensus 190 DvV~~~a~~~d~~~~l~ 206 (298)
T 3fpf_A 190 DVLMVAALAEPKRRVFR 206 (298)
T ss_dssp SEEEECTTCSCHHHHHH
T ss_pred CEEEECCCccCHHHHHH
Confidence 99999887655555555
No 34
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.01 E-value=8.4e-10 Score=80.27 Aligned_cols=74 Identities=12% Similarity=0.215 Sum_probs=56.3
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
+..+|||||||+|+.++.+++..+ +++|+++| .++ .+++++++|+.+..... . ..++||
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~-~---~~~~fD 143 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICFP-HLHVTIVDSLNKRITFLEKLSEALQL-ENTTFCHDRAETFGQRK-D---VRESYD 143 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHCT-TCEEEEEESCHHHHHHHHHHHHHHTC-SSEEEEESCHHHHTTCT-T---TTTCEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHcCC-CCEEEEeccHHHhcccc-c---ccCCcc
Confidence 467999999999999999998766 78999999 245 36999999998752100 0 036899
Q ss_pred EEEEcCCCcCCHHHHh
Q 042171 69 YAFMDADKDNYCNYMR 84 (125)
Q Consensus 69 ~v~id~~~~~~~~~~~ 84 (125)
+|++++. ..+..+++
T Consensus 144 ~V~~~~~-~~~~~~l~ 158 (240)
T 1xdz_A 144 IVTARAV-ARLSVLSE 158 (240)
T ss_dssp EEEEECC-SCHHHHHH
T ss_pred EEEEecc-CCHHHHHH
Confidence 9999874 45556666
No 35
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.00 E-value=9.1e-10 Score=75.66 Aligned_cols=72 Identities=15% Similarity=0.147 Sum_probs=55.8
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
+..+|||+|||+|..++.+++..+ +.+|+++| .++.+++ ++.+|+.+.++.. .++||
T Consensus 25 ~~~~vldiG~G~G~~~~~l~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~~------~~~~D 96 (178)
T 3hm2_A 25 PHETLWDIGGGSGSIAIEWLRSTP-QTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDDV------PDNPD 96 (178)
T ss_dssp TTEEEEEESTTTTHHHHHHHTTSS-SEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGGC------CSCCS
T ss_pred CCCeEEEeCCCCCHHHHHHHHHCC-CCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhcc------CCCCC
Confidence 345999999999999999999886 78999999 3565588 8889987665532 37899
Q ss_pred EEEEcCCCcCCHHHHh
Q 042171 69 YAFMDADKDNYCNYMR 84 (125)
Q Consensus 69 ~v~id~~~~~~~~~~~ 84 (125)
+|+++..... ..+++
T Consensus 97 ~i~~~~~~~~-~~~l~ 111 (178)
T 3hm2_A 97 VIFIGGGLTA-PGVFA 111 (178)
T ss_dssp EEEECC-TTC-TTHHH
T ss_pred EEEECCcccH-HHHHH
Confidence 9999876544 44454
No 36
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.00 E-value=1.7e-09 Score=74.83 Aligned_cols=67 Identities=13% Similarity=0.178 Sum_probs=52.9
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
+..+|||+|||+|..++.+++. + ..+|+++| .++.++++++.+|+.+.++.+.. ..++||
T Consensus 44 ~~~~vLD~GcG~G~~~~~~~~~-~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~---~~~~fD 118 (187)
T 2fhp_A 44 DGGMALDLYSGSGGLAIEAVSR-G-MDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYE---EKLQFD 118 (187)
T ss_dssp SSCEEEETTCTTCHHHHHHHHT-T-CSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHH---TTCCEE
T ss_pred CCCCEEEeCCccCHHHHHHHHc-C-CCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHh---cCCCCC
Confidence 4679999999999999998883 3 57999999 34556899999999987664421 146899
Q ss_pred EEEEcCC
Q 042171 69 YAFMDAD 75 (125)
Q Consensus 69 ~v~id~~ 75 (125)
+|+++..
T Consensus 119 ~i~~~~~ 125 (187)
T 2fhp_A 119 LVLLDPP 125 (187)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 9998644
No 37
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.99 E-value=2.6e-09 Score=81.99 Aligned_cols=66 Identities=12% Similarity=0.076 Sum_probs=54.6
Q ss_pred CEEEEEcCcccHHHHHHHhhCCCCCEEEEEe------------CCC--CCcEEEEecchHHHHHHHhhcCCCCCceeEEE
Q 042171 6 KKTIEIGVFTGYSLFLTALTIPEDGQITAID------------ARV--DHKINFIESEALSVLDQLLKDSENEVNFDYAF 71 (125)
Q Consensus 6 ~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD------------~~~--~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~ 71 (125)
.+|||||||+|..+.++++..| +.+|++|| .+. .++++++.+|+.+.+..+ ..++||+|+
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p-~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~-----~~~~fDvIi 164 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYP-QSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESF-----TPASRDVII 164 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHST-TCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTC-----CTTCEEEEE
T ss_pred CEEEEEECCcCHHHHHHHHHCC-CcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhc-----cCCCCCEEE
Confidence 3999999999999999999887 67999999 222 468999999999887643 146899999
Q ss_pred EcCCCc
Q 042171 72 MDADKD 77 (125)
Q Consensus 72 id~~~~ 77 (125)
+|....
T Consensus 165 ~D~~~~ 170 (317)
T 3gjy_A 165 RDVFAG 170 (317)
T ss_dssp ECCSTT
T ss_pred ECCCCc
Confidence 997644
No 38
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=98.99 E-value=1.3e-09 Score=77.86 Aligned_cols=63 Identities=14% Similarity=0.138 Sum_probs=52.7
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
+..+|||||||+|..++.+++. +++|+++| .++.++++++.+|+.+.++. ..+||
T Consensus 55 ~~~~vLDlGcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~-------~~~~D 124 (204)
T 3njr_A 55 RGELLWDIGGGSGSVSVEWCLA---GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALAD-------LPLPE 124 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTT-------SCCCS
T ss_pred CCCEEEEecCCCCHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhccc-------CCCCC
Confidence 4569999999999999999997 68999999 45655899999999886543 35799
Q ss_pred EEEEcCCC
Q 042171 69 YAFMDADK 76 (125)
Q Consensus 69 ~v~id~~~ 76 (125)
+||++...
T Consensus 125 ~v~~~~~~ 132 (204)
T 3njr_A 125 AVFIGGGG 132 (204)
T ss_dssp EEEECSCC
T ss_pred EEEECCcc
Confidence 99998744
No 39
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=98.98 E-value=3.2e-09 Score=75.61 Aligned_cols=111 Identities=16% Similarity=0.208 Sum_probs=78.0
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCC----cEEEEecchHHHHHHHhhcCCCC
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDH----KINFIESEALSVLDQLLKDSENE 64 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~----~i~~~~gd~~~~l~~~~~~~~~~ 64 (125)
++.+|||||||+|..+..+++..+ ..+++++| .++.. +++++.+|+... +. ..
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~-~~------~~ 100 (217)
T 3jwh_A 29 NARRVIDLGCGQGNLLKILLKDSF-FEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQ-DK------RF 100 (217)
T ss_dssp TCCEEEEETCTTCHHHHHHHHCTT-CSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSC-CG------GG
T ss_pred CCCEEEEeCCCCCHHHHHHHhhCC-CCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccc-cc------cC
Confidence 567999999999999999999765 58999999 23332 799999998533 21 13
Q ss_pred CceeEEEEcCCCcCCH-----HHHhhh---C---------------------CC-------CCCcchHHHHHHHHHHhhc
Q 042171 65 VNFDYAFMDADKDNYC-----NYMREQ---V---------------------PD-------HFRGSSKQAILDLNRSLVD 108 (125)
Q Consensus 65 ~~fD~v~id~~~~~~~-----~~~~~~---~---------------------~~-------~~~~~~~~~~~~~~~~l~~ 108 (125)
++||+|++.......+ .+++.. + +. +......+.++++.+.+.+
T Consensus 101 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 180 (217)
T 3jwh_A 101 HGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPNIEYNVKFANLPAGKLRHKDHRFEWTRSQFQNWANKITE 180 (217)
T ss_dssp CSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBHHHHHHTC-----------CCSCBCHHHHHHHHHHHHH
T ss_pred CCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccCcccchhhcccccccccccccccccCHHHHHHHHHHHHH
Confidence 6899999876544322 233310 0 00 0011356678888889988
Q ss_pred CCCeEEEEeecCCc
Q 042171 109 DPCVQLSHVALGES 122 (125)
Q Consensus 109 ~~~~~~~~lp~~~G 122 (125)
.-+|++...++|+.
T Consensus 181 ~~Gf~v~~~~~g~~ 194 (217)
T 3jwh_A 181 RFAYNVQFQPIGEA 194 (217)
T ss_dssp HSSEEEEECCCSCC
T ss_pred HcCceEEEEecCCc
Confidence 88999999988875
No 40
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=98.98 E-value=1.8e-09 Score=76.93 Aligned_cols=112 Identities=19% Similarity=0.215 Sum_probs=78.3
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCC----cEEEEecchHHHHHHHhhcCCCC
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDH----KINFIESEALSVLDQLLKDSENE 64 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~----~i~~~~gd~~~~l~~~~~~~~~~ 64 (125)
++.+|||||||+|..+..+++..+ ..+++++| .++.+ +++++.+|+... +. ..
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~-~~------~~ 100 (219)
T 3jwg_A 29 NAKKVIDLGCGEGNLLSLLLKDKS-FEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYR-DK------RF 100 (219)
T ss_dssp TCCEEEEETCTTCHHHHHHHTSTT-CCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSC-CG------GG
T ss_pred CCCEEEEecCCCCHHHHHHHhcCC-CCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCccccc-cc------cc
Confidence 567999999999999999999765 58999999 22322 899999998533 21 14
Q ss_pred CceeEEEEcCCCcCCH-----HHHhhh---C-C-----------------C----------CCCcchHHHHHHHHHHhhc
Q 042171 65 VNFDYAFMDADKDNYC-----NYMREQ---V-P-----------------D----------HFRGSSKQAILDLNRSLVD 108 (125)
Q Consensus 65 ~~fD~v~id~~~~~~~-----~~~~~~---~-~-----------------~----------~~~~~~~~~~~~~~~~l~~ 108 (125)
++||+|++.......+ .+++.. + + . +........++++.+.+.+
T Consensus 101 ~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 180 (219)
T 3jwg_A 101 SGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPNKEYNFHYGNLFEGNLRHRDHRFEWTRKEFQTWAVKVAE 180 (219)
T ss_dssp TTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBGGGGGCCCCT-----GGGCCTTSBCHHHHHHHHHHHHH
T ss_pred CCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccchhhhhhhcccCcccccccCceeeecHHHHHHHHHHHHH
Confidence 7899999876544332 233311 0 0 0 0001256678888888888
Q ss_pred CCCeEEEEeecCCcc
Q 042171 109 DPCVQLSHVALGESV 123 (125)
Q Consensus 109 ~~~~~~~~lp~~~G~ 123 (125)
.-+|++...+++++-
T Consensus 181 ~~Gf~v~~~~~g~~~ 195 (219)
T 3jwg_A 181 KYGYSVRFLQIGEID 195 (219)
T ss_dssp HHTEEEEEEEESCCC
T ss_pred HCCcEEEEEecCCcc
Confidence 889999999888763
No 41
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.98 E-value=2.3e-09 Score=82.56 Aligned_cols=68 Identities=22% Similarity=0.235 Sum_probs=55.4
Q ss_pred CCCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe------------C-----CC-CCcEEEEecchHHHHHHHhhcCCCC
Q 042171 3 LKLKKTIEIGVFTGYSLFLTALTIPEDGQITAID------------A-----RV-DHKINFIESEALSVLDQLLKDSENE 64 (125)
Q Consensus 3 ~~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD------------~-----~~-~~~i~~~~gd~~~~l~~~~~~~~~~ 64 (125)
.++++|||||||+|..+.++++..+ ..+|+++| . ++ .++++++.+|+.+.++.+ ..
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~-~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~-----~~ 192 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHAS-IEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNA-----AE 192 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTT-CCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTS-----CT
T ss_pred CCCCEEEEECCCccHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhc-----cC
Confidence 3578999999999999999998755 68999999 1 23 368999999999886643 14
Q ss_pred CceeEEEEcCCC
Q 042171 65 VNFDYAFMDADK 76 (125)
Q Consensus 65 ~~fD~v~id~~~ 76 (125)
++||+|++|...
T Consensus 193 ~~fDlIi~d~~~ 204 (334)
T 1xj5_A 193 GSYDAVIVDSSD 204 (334)
T ss_dssp TCEEEEEECCCC
T ss_pred CCccEEEECCCC
Confidence 689999998763
No 42
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=98.98 E-value=1.3e-09 Score=77.10 Aligned_cols=67 Identities=15% Similarity=0.242 Sum_probs=55.1
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
+..+|||||||+|+.+..+++. .++|+++| .++ .+++++.+|+.+.++. .++||
T Consensus 77 ~~~~vLdiG~G~G~~~~~la~~---~~~v~~vD~~~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~-------~~~~D 145 (210)
T 3lbf_A 77 PQSRVLEIGTGSGYQTAILAHL---VQHVCSVERIKGLQWQARRRLKNLDL-HNVSTRHGDGWQGWQA-------RAPFD 145 (210)
T ss_dssp TTCEEEEECCTTSHHHHHHHHH---SSEEEEEESCHHHHHHHHHHHHHTTC-CSEEEEESCGGGCCGG-------GCCEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCC-CceEEEECCcccCCcc-------CCCcc
Confidence 4579999999999999999998 58999999 345 4799999999875432 47899
Q ss_pred EEEEcCCCcCCHH
Q 042171 69 YAFMDADKDNYCN 81 (125)
Q Consensus 69 ~v~id~~~~~~~~ 81 (125)
+|+++......++
T Consensus 146 ~i~~~~~~~~~~~ 158 (210)
T 3lbf_A 146 AIIVTAAPPEIPT 158 (210)
T ss_dssp EEEESSBCSSCCT
T ss_pred EEEEccchhhhhH
Confidence 9999987766554
No 43
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.97 E-value=4.1e-09 Score=78.84 Aligned_cols=67 Identities=12% Similarity=0.177 Sum_probs=55.3
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe------------C-----CC-CCcEEEEecchHHHHHHHhhcCCCCC
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID------------A-----RV-DHKINFIESEALSVLDQLLKDSENEV 65 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD------------~-----~~-~~~i~~~~gd~~~~l~~~~~~~~~~~ 65 (125)
++++|||||||+|..+..+++..+ ..+|+++| . ++ .++++++.+|+.+.++.. .+
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~------~~ 147 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPS-VKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKS------EN 147 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTT-CSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTC------CS
T ss_pred CCCEEEEECCchHHHHHHHHhCCC-CceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhC------CC
Confidence 578999999999999999998644 68999999 1 34 468999999999877642 47
Q ss_pred ceeEEEEcCCCc
Q 042171 66 NFDYAFMDADKD 77 (125)
Q Consensus 66 ~fD~v~id~~~~ 77 (125)
+||+|++|....
T Consensus 148 ~fD~Ii~d~~~~ 159 (275)
T 1iy9_A 148 QYDVIMVDSTEP 159 (275)
T ss_dssp CEEEEEESCSSC
T ss_pred CeeEEEECCCCC
Confidence 899999997653
No 44
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=98.94 E-value=3.4e-09 Score=76.05 Aligned_cols=64 Identities=16% Similarity=0.211 Sum_probs=52.1
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
...+|||||||+|..++.+|+..| +.+++++| .++ .+++++.+|+.+....+ +.++||
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p-~~~v~giD~s~~~l~~a~~~~~~~~~-~nv~~~~~d~~~l~~~~-----~~~~~d 110 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNP-DINYIGIELFKSVIVTAVQKVKDSEA-QNVKLLNIDADTLTDVF-----EPGEVK 110 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCT-TSEEEEECSCHHHHHHHHHHHHHSCC-SSEEEECCCGGGHHHHC-----CTTSCC
T ss_pred CCceEEEEecCCCHHHHHHHHHCC-CCCEEEEEechHHHHHHHHHHHHcCC-CCEEEEeCCHHHHHhhc-----CcCCcC
Confidence 356899999999999999999987 78999999 345 57999999998743223 246899
Q ss_pred EEEEcC
Q 042171 69 YAFMDA 74 (125)
Q Consensus 69 ~v~id~ 74 (125)
.|++..
T Consensus 111 ~v~~~~ 116 (213)
T 2fca_A 111 RVYLNF 116 (213)
T ss_dssp EEEEES
T ss_pred EEEEEC
Confidence 999854
No 45
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=98.94 E-value=2.2e-09 Score=76.90 Aligned_cols=74 Identities=15% Similarity=0.219 Sum_probs=55.7
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCC----CCCEEEEEe---------------CCC----CCcEEEEecchHHHHHHHhhc
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIP----EDGQITAID---------------ARV----DHKINFIESEALSVLDQLLKD 60 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~----~~~~v~~iD---------------~~~----~~~i~~~~gd~~~~l~~~~~~ 60 (125)
+..+|||||||+|+.++.+++..+ +.++|+++| .++ ..+++++.+|+.+.++....
T Consensus 80 ~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~- 158 (227)
T 2pbf_A 80 PGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKK- 158 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHH-
T ss_pred CCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCc-
Confidence 456999999999999999999875 468999999 231 36899999999875411000
Q ss_pred CCCCCceeEEEEcCCCcCCH
Q 042171 61 SENEVNFDYAFMDADKDNYC 80 (125)
Q Consensus 61 ~~~~~~fD~v~id~~~~~~~ 80 (125)
..++||+|+++......+
T Consensus 159 --~~~~fD~I~~~~~~~~~~ 176 (227)
T 2pbf_A 159 --ELGLFDAIHVGASASELP 176 (227)
T ss_dssp --HHCCEEEEEECSBBSSCC
T ss_pred --cCCCcCEEEECCchHHHH
Confidence 036899999987765543
No 46
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=98.94 E-value=1.2e-09 Score=79.60 Aligned_cols=65 Identities=18% Similarity=0.279 Sum_probs=54.1
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
+..+|||+|||+|..++.+++.+.+.++++++| .++.++++++.+|+.+.++ .++||
T Consensus 93 ~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--------~~~~D 164 (255)
T 3mb5_A 93 PGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGIE--------EENVD 164 (255)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCCC--------CCSEE
T ss_pred CCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhccC--------CCCcC
Confidence 456999999999999999999965579999999 3666779999999986532 46799
Q ss_pred EEEEcCCC
Q 042171 69 YAFMDADK 76 (125)
Q Consensus 69 ~v~id~~~ 76 (125)
+|++|...
T Consensus 165 ~v~~~~~~ 172 (255)
T 3mb5_A 165 HVILDLPQ 172 (255)
T ss_dssp EEEECSSC
T ss_pred EEEECCCC
Confidence 99997543
No 47
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=98.93 E-value=1.6e-09 Score=77.35 Aligned_cols=65 Identities=18% Similarity=0.207 Sum_probs=52.8
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
+..+|||||||+|..++.+++..| +.+++++| .++ ++++++.+|+.+....+ ..++||
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p-~~~v~gvD~s~~~l~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~-----~~~~~D 113 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNP-DINYIGIDIQKSVLSYALDKVLEVGV-PNIKLLWVDGSDLTDYF-----EDGEID 113 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHHCC-SSEEEEECCSSCGGGTS-----CTTCCS
T ss_pred CCCeEEEEccCcCHHHHHHHHHCC-CCCEEEEEcCHHHHHHHHHHHHHcCC-CCEEEEeCCHHHHHhhc-----CCCCCC
Confidence 356899999999999999999987 78999999 345 68999999998742112 146899
Q ss_pred EEEEcCC
Q 042171 69 YAFMDAD 75 (125)
Q Consensus 69 ~v~id~~ 75 (125)
+|+++..
T Consensus 114 ~i~~~~~ 120 (214)
T 1yzh_A 114 RLYLNFS 120 (214)
T ss_dssp EEEEESC
T ss_pred EEEEECC
Confidence 9999754
No 48
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=98.93 E-value=1.9e-09 Score=79.27 Aligned_cols=63 Identities=16% Similarity=0.251 Sum_probs=52.7
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
+..+|||+|||+|..++.+++..+ ++|+++| .++.++++++++|+.+..+.+ ..++||
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~~~--~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~-----~~~~fD 121 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTRTK--AKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLI-----PKERAD 121 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTTCC--CEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTS-----CTTCEE
T ss_pred CCCEEEEcCCchhHHHHHHHHhcC--CcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhh-----ccCCcc
Confidence 467999999999999999999854 4999999 567778999999999875433 147899
Q ss_pred EEEEc
Q 042171 69 YAFMD 73 (125)
Q Consensus 69 ~v~id 73 (125)
+|+++
T Consensus 122 ~Ii~n 126 (259)
T 3lpm_A 122 IVTCN 126 (259)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99985
No 49
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=98.92 E-value=1.3e-09 Score=80.18 Aligned_cols=74 Identities=15% Similarity=0.141 Sum_probs=55.6
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe-CC-----------CCCcEEEEecchHHHHHHHhhcCCCCCceeEEE
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID-AR-----------VDHKINFIESEALSVLDQLLKDSENEVNFDYAF 71 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD-~~-----------~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~ 71 (125)
+..+|||+|||+|+.|..+|+.+++.|+|+++| +. -..+++++.+|+..... ... ..++||+||
T Consensus 76 ~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~-~~~---~~~~~D~I~ 151 (232)
T 3id6_C 76 KGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQS-YKS---VVENVDVLY 151 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGG-TTT---TCCCEEEEE
T ss_pred CCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchh-hhc---cccceEEEE
Confidence 346999999999999999999987789999999 11 12579999999875321 100 136899999
Q ss_pred EcCCCcCCHH
Q 042171 72 MDADKDNYCN 81 (125)
Q Consensus 72 id~~~~~~~~ 81 (125)
+|.....-..
T Consensus 152 ~d~a~~~~~~ 161 (232)
T 3id6_C 152 VDIAQPDQTD 161 (232)
T ss_dssp ECCCCTTHHH
T ss_pred ecCCChhHHH
Confidence 9987754433
No 50
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.92 E-value=3.2e-09 Score=79.11 Aligned_cols=71 Identities=17% Similarity=0.176 Sum_probs=52.9
Q ss_pred CCCEEEEEcCcccHHHHHHHhhC-------CC----CCEEEEEe-CC---------------------------------
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTI-------PE----DGQITAID-AR--------------------------------- 38 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~-------~~----~~~v~~iD-~~--------------------------------- 38 (125)
++.+|||||+|+|+++++++++. |. ..+++++| .+
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 45699999999999999988763 42 25899999 22
Q ss_pred -----CC---CcEEEEecchHHHHHHHhhcCCCCCceeEEEEcCCC
Q 042171 39 -----VD---HKINFIESEALSVLDQLLKDSENEVNFDYAFMDADK 76 (125)
Q Consensus 39 -----~~---~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~id~~~ 76 (125)
+. .+++++.||+.+.++.+... ...+||+||+|+..
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~--~~~~~D~iflD~fs 183 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDS--LNQKVDAWFLDGFA 183 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGG--GTTCEEEEEECSSC
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccc--cCCeEEEEEECCCC
Confidence 22 36889999999988875210 01379999999863
No 51
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=98.91 E-value=2.7e-09 Score=77.13 Aligned_cols=62 Identities=24% Similarity=0.225 Sum_probs=52.2
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
+..+|||+|||+|..++.+++. +.+|+++| .++.++++++++|+.+..+ .++||
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~--------~~~~D 146 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALT---GMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLAS--------FLKAD 146 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGG--------GCCCS
T ss_pred CCCEEEECccccCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcc--------cCCCC
Confidence 4679999999999999999986 48999999 4555689999999988742 47899
Q ss_pred EEEEcCCC
Q 042171 69 YAFMDADK 76 (125)
Q Consensus 69 ~v~id~~~ 76 (125)
+|+++..-
T Consensus 147 ~v~~~~~~ 154 (241)
T 3gdh_A 147 VVFLSPPW 154 (241)
T ss_dssp EEEECCCC
T ss_pred EEEECCCc
Confidence 99998654
No 52
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=98.91 E-value=3.6e-09 Score=75.30 Aligned_cols=63 Identities=16% Similarity=0.122 Sum_probs=50.7
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
+..+|||+|||+|..++++++.. ..+|+++| .++ ++++++++|+.+.++.. .++||
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~--~~~V~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~D~~~~~~~~------~~~fD 124 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRY--AAGATLIEMDRAVSQQLIKNLATLKA-GNARVVNSNAMSFLAQK------GTPHN 124 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT--CSEEEEECSCHHHHHHHHHHHHHTTC-CSEEEECSCHHHHHSSC------CCCEE
T ss_pred CCCeEEEeCCCcCHHHHHHHhcC--CCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEECCHHHHHhhc------CCCCC
Confidence 45799999999999999877653 35899999 344 68999999998875531 46899
Q ss_pred EEEEcCC
Q 042171 69 YAFMDAD 75 (125)
Q Consensus 69 ~v~id~~ 75 (125)
+|++|..
T Consensus 125 ~V~~~~p 131 (202)
T 2fpo_A 125 IVFVDPP 131 (202)
T ss_dssp EEEECCS
T ss_pred EEEECCC
Confidence 9999755
No 53
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=98.91 E-value=4.5e-09 Score=78.13 Aligned_cols=64 Identities=16% Similarity=0.215 Sum_probs=52.4
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCC-CCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCce
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIP-EDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNF 67 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~-~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~f 67 (125)
...+|||||||+|..++.|++.++ ++.+|+++| .+...+|+++++|+.+. | .++|
T Consensus 70 ~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~-~--------~~~~ 140 (261)
T 4gek_A 70 PGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDI-A--------IENA 140 (261)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTC-C--------CCSE
T ss_pred CCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccc-c--------cccc
Confidence 456999999999999999999875 357999999 35667899999999764 2 3679
Q ss_pred eEEEEcCCC
Q 042171 68 DYAFMDADK 76 (125)
Q Consensus 68 D~v~id~~~ 76 (125)
|+|++....
T Consensus 141 d~v~~~~~l 149 (261)
T 4gek_A 141 SMVVLNFTL 149 (261)
T ss_dssp EEEEEESCG
T ss_pred ccceeeeee
Confidence 999986553
No 54
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=98.89 E-value=9.7e-09 Score=70.76 Aligned_cols=71 Identities=20% Similarity=0.266 Sum_probs=56.6
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
+..+|||+|||+|..+..+++.. .+++++| .++.++++++.+|+.+.++. .++||
T Consensus 33 ~~~~vldiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-------~~~~D 102 (192)
T 1l3i_A 33 KNDVAVDVGCGTGGVTLELAGRV---RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCK-------IPDID 102 (192)
T ss_dssp TTCEEEEESCTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTT-------SCCEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhc---CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhccc-------CCCCC
Confidence 45699999999999999999875 7999999 34546899999999875432 25899
Q ss_pred EEEEcCCCcCCHHHHh
Q 042171 69 YAFMDADKDNYCNYMR 84 (125)
Q Consensus 69 ~v~id~~~~~~~~~~~ 84 (125)
+|+++........+++
T Consensus 103 ~v~~~~~~~~~~~~l~ 118 (192)
T 1l3i_A 103 IAVVGGSGGELQEILR 118 (192)
T ss_dssp EEEESCCTTCHHHHHH
T ss_pred EEEECCchHHHHHHHH
Confidence 9999877555566665
No 55
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=98.89 E-value=9.5e-09 Score=70.42 Aligned_cols=99 Identities=16% Similarity=0.153 Sum_probs=68.2
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
+..+|||+|||+|..++.+++ + ..+++++| .++ ++++++.+|+.+.++ .++||
T Consensus 35 ~~~~vLdiG~G~G~~~~~l~~--~-~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~~d~~~~~~--------~~~~D 102 (183)
T 2yxd_A 35 KDDVVVDVGCGSGGMTVEIAK--R-CKFVYAIDYLDGAIEVTKQNLAKFNI-KNCQIIKGRAEDVLD--------KLEFN 102 (183)
T ss_dssp TTCEEEEESCCCSHHHHHHHT--T-SSEEEEEECSHHHHHHHHHHHHHTTC-CSEEEEESCHHHHGG--------GCCCS
T ss_pred CCCEEEEeCCCCCHHHHHHHh--c-CCeEEEEeCCHHHHHHHHHHHHHcCC-CcEEEEECCcccccc--------CCCCc
Confidence 456999999999999999998 3 78999999 344 579999999987432 36899
Q ss_pred EEEEcCCCcCCHHHHhhh--CCCCC---CcchHHHHHHHHHHhhcCCCeEEEE
Q 042171 69 YAFMDADKDNYCNYMREQ--VPDHF---RGSSKQAILDLNRSLVDDPCVQLSH 116 (125)
Q Consensus 69 ~v~id~~~~~~~~~~~~~--~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~ 116 (125)
+|+++.. .....+++.. ++.-. .........++.+.+.+.. +.+..
T Consensus 103 ~i~~~~~-~~~~~~l~~~~~~~gG~l~~~~~~~~~~~~~~~~l~~~g-~~~~~ 153 (183)
T 2yxd_A 103 KAFIGGT-KNIEKIIEILDKKKINHIVANTIVLENAAKIINEFESRG-YNVDA 153 (183)
T ss_dssp EEEECSC-SCHHHHHHHHHHTTCCEEEEEESCHHHHHHHHHHHHHTT-CEEEE
T ss_pred EEEECCc-ccHHHHHHHHhhCCCCEEEEEecccccHHHHHHHHHHcC-CeEEE
Confidence 9999877 4455555532 22210 0113445666777776654 44443
No 56
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.89 E-value=4e-09 Score=76.26 Aligned_cols=65 Identities=18% Similarity=0.105 Sum_probs=50.3
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe-------------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEE
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID-------------ARVDHKINFIESEALSVLDQLLKDSENEVNFDYA 70 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD-------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v 70 (125)
+..+|||||||+|..+..+++.. ..+|+++| .....+++++++|+.+.++.+ .+++||+|
T Consensus 60 ~~~~vLDiGcGtG~~~~~l~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~-----~~~~fD~V 132 (236)
T 1zx0_A 60 KGGRVLEVGFGMAIAASKVQEAP--IDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTL-----PDGHFDGI 132 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHHTSC--EEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGS-----CTTCEEEE
T ss_pred CCCeEEEEeccCCHHHHHHHhcC--CCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhccc-----CCCceEEE
Confidence 35699999999999999997643 35899999 122368999999999875434 25789999
Q ss_pred EEcCC
Q 042171 71 FMDAD 75 (125)
Q Consensus 71 ~id~~ 75 (125)
++|..
T Consensus 133 ~~d~~ 137 (236)
T 1zx0_A 133 LYDTY 137 (236)
T ss_dssp EECCC
T ss_pred EECCc
Confidence 99543
No 57
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.89 E-value=6.3e-09 Score=79.53 Aligned_cols=65 Identities=15% Similarity=0.197 Sum_probs=54.0
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe------------CC-----C-CCcEEEEecchHHHHHHHhhcCCCCC
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID------------AR-----V-DHKINFIESEALSVLDQLLKDSENEV 65 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD------------~~-----~-~~~i~~~~gd~~~~l~~~~~~~~~~~ 65 (125)
++++|||||||+|..+..+++..+ ..+|+++| .. + .++++++.+|+.+.++.. .+
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~------~~ 188 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKS-VENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENV------TN 188 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTT-CCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHC------CS
T ss_pred CCCEEEEEcCCccHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhc------CC
Confidence 578999999999999999998655 68999999 11 2 468999999999876643 47
Q ss_pred ceeEEEEcCC
Q 042171 66 NFDYAFMDAD 75 (125)
Q Consensus 66 ~fD~v~id~~ 75 (125)
+||+|++|..
T Consensus 189 ~fDvIi~d~~ 198 (321)
T 2pt6_A 189 TYDVIIVDSS 198 (321)
T ss_dssp CEEEEEEECC
T ss_pred CceEEEECCc
Confidence 8999999974
No 58
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.88 E-value=5.9e-09 Score=73.16 Aligned_cols=72 Identities=21% Similarity=0.194 Sum_probs=52.2
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCC-CCEEEEEe-CCC--CCcEEEEecchHHHH-------------------HHHhhc
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPE-DGQITAID-ARV--DHKINFIESEALSVL-------------------DQLLKD 60 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~-~~~v~~iD-~~~--~~~i~~~~gd~~~~l-------------------~~~~~~ 60 (125)
+..+|||+|||+|..+..+++.+++ +++|+++| +.. ..+++++++|+.+.. +.+...
T Consensus 22 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~~~~~v~~~~~d~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 101 (201)
T 2plw_A 22 KNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMDPIPNVYFIQGEIGKDNMNNIKNINYIDNMNNNSVDYKLKEI 101 (201)
T ss_dssp TTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCCCCTTCEEEECCTTTTSSCCC-----------CHHHHHHHHH
T ss_pred CCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccCCCCCceEEEccccchhhhhhccccccccccchhhHHHHHhh
Confidence 3468999999999999999999874 68999999 221 257999999987542 000000
Q ss_pred CCCCCceeEEEEcCCC
Q 042171 61 SENEVNFDYAFMDADK 76 (125)
Q Consensus 61 ~~~~~~fD~v~id~~~ 76 (125)
. +..+||+|+++...
T Consensus 102 ~-~~~~fD~v~~~~~~ 116 (201)
T 2plw_A 102 L-QDKKIDIILSDAAV 116 (201)
T ss_dssp H-TTCCEEEEEECCCC
T ss_pred c-CCCcccEEEeCCCc
Confidence 0 14689999998754
No 59
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.88 E-value=5.9e-09 Score=78.74 Aligned_cols=67 Identities=15% Similarity=0.146 Sum_probs=53.2
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe------------C-----CC-CCcEEEEecchHHHHHHHhhcCCCCC
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID------------A-----RV-DHKINFIESEALSVLDQLLKDSENEV 65 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD------------~-----~~-~~~i~~~~gd~~~~l~~~~~~~~~~~ 65 (125)
++.+|||||||+|..+..+++..+ ..+|+++| . ++ .++++++.+|+.+.++.. .+
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~------~~ 162 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDS-VEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKF------KN 162 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTT-CSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGC------SS
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCC-CCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhC------CC
Confidence 568999999999999999998765 68999999 1 12 468999999999876542 46
Q ss_pred ceeEEEEcCCCc
Q 042171 66 NFDYAFMDADKD 77 (125)
Q Consensus 66 ~fD~v~id~~~~ 77 (125)
+||+|++|....
T Consensus 163 ~fD~Ii~d~~~~ 174 (296)
T 1inl_A 163 EFDVIIIDSTDP 174 (296)
T ss_dssp CEEEEEEEC---
T ss_pred CceEEEEcCCCc
Confidence 899999987543
No 60
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=98.87 E-value=2e-09 Score=77.41 Aligned_cols=69 Identities=14% Similarity=0.114 Sum_probs=51.4
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe-CC-----------CCCcEEEEecchHHHHHHHhhcCCCCCceeEEE
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID-AR-----------VDHKINFIESEALSVLDQLLKDSENEVNFDYAF 71 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD-~~-----------~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~ 71 (125)
+..+|||+|||+|..+..+++.++ +++|+++| +. -..++.++.+|+.+...... ..++||+|+
T Consensus 57 ~g~~VLDlGcGtG~~~~~la~~~~-~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~~----~~~~fD~V~ 131 (210)
T 1nt2_A 57 GDERVLYLGAASGTTVSHLADIVD-EGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSG----IVEKVDLIY 131 (210)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHTT-TSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTT----TCCCEEEEE
T ss_pred CCCEEEEECCcCCHHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhcc----cccceeEEE
Confidence 346999999999999999999988 78999999 11 12578899998875311000 136899999
Q ss_pred EcCCCc
Q 042171 72 MDADKD 77 (125)
Q Consensus 72 id~~~~ 77 (125)
++...+
T Consensus 132 ~~~~~~ 137 (210)
T 1nt2_A 132 QDIAQK 137 (210)
T ss_dssp ECCCST
T ss_pred EeccCh
Confidence 986543
No 61
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=98.87 E-value=4.7e-09 Score=74.61 Aligned_cols=65 Identities=17% Similarity=0.220 Sum_probs=50.8
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCC-CcEEEEecchHHHHHHHhhcCCCCCc-
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVD-HKINFIESEALSVLDQLLKDSENEVN- 66 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~-~~i~~~~gd~~~~l~~~~~~~~~~~~- 66 (125)
+..+|||+|||+|..++.++..- ..+|+++| .++. ++++++.+|+.+.++.+ ..++
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~-----~~~~~ 125 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQ--AKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQP-----QNQPH 125 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT--CSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSC-----CSSCC
T ss_pred CCCeEEEcCCccCHHHHHHHHcc--CCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhh-----ccCCC
Confidence 45799999999999999877652 36899999 3443 68999999998875432 1367
Q ss_pred eeEEEEcCC
Q 042171 67 FDYAFMDAD 75 (125)
Q Consensus 67 fD~v~id~~ 75 (125)
||+|++|..
T Consensus 126 fD~I~~~~~ 134 (201)
T 2ift_A 126 FDVVFLDPP 134 (201)
T ss_dssp EEEEEECCC
T ss_pred CCEEEECCC
Confidence 999998654
No 62
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=98.87 E-value=2.2e-08 Score=74.54 Aligned_cols=67 Identities=25% Similarity=0.293 Sum_probs=53.6
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
+..+|||+|||+|..|+.+++.++..++|+++| .++ .+++++.+|+.+..+.+.. ..++||
T Consensus 83 ~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~-~~v~~~~~D~~~~~~~~~~---~~~~fD 158 (274)
T 3ajd_A 83 EDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGV-LNTIIINADMRKYKDYLLK---NEIFFD 158 (274)
T ss_dssp TTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTC-CSEEEEESCHHHHHHHHHH---TTCCEE
T ss_pred CcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCC-CcEEEEeCChHhcchhhhh---ccccCC
Confidence 456999999999999999999887459999999 355 4899999999877443211 136899
Q ss_pred EEEEcC
Q 042171 69 YAFMDA 74 (125)
Q Consensus 69 ~v~id~ 74 (125)
.|++|.
T Consensus 159 ~Vl~d~ 164 (274)
T 3ajd_A 159 KILLDA 164 (274)
T ss_dssp EEEEEE
T ss_pred EEEEcC
Confidence 999994
No 63
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=98.87 E-value=3.6e-09 Score=77.61 Aligned_cols=64 Identities=17% Similarity=0.234 Sum_probs=52.9
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
++.+|||||||+|..+..+++. + .++|+++| .++.++++++.+|+.+. + + ..++||
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~-~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~-~-----~~~~fD 116 (267)
T 3kkz_A 46 EKSLIADIGCGTGGQTMVLAGH-V-TGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDL-P-F-----RNEELD 116 (267)
T ss_dssp TTCEEEEETCTTCHHHHHHHTT-C-SSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC-C-C-----CTTCEE
T ss_pred CCCEEEEeCCCCCHHHHHHHhc-c-CCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhC-C-C-----CCCCEE
Confidence 4679999999999999999998 4 67999999 46667899999999764 3 2 257899
Q ss_pred EEEEcCCC
Q 042171 69 YAFMDADK 76 (125)
Q Consensus 69 ~v~id~~~ 76 (125)
+|++....
T Consensus 117 ~i~~~~~~ 124 (267)
T 3kkz_A 117 LIWSEGAI 124 (267)
T ss_dssp EEEESSCG
T ss_pred EEEEcCCc
Confidence 99987653
No 64
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=98.86 E-value=2.7e-09 Score=79.37 Aligned_cols=66 Identities=24% Similarity=0.319 Sum_probs=53.9
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe-------------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEE
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID-------------ARVDHKINFIESEALSVLDQLLKDSENEVNFDYA 70 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD-------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v 70 (125)
++.+|||||||+|.++..+++.+|++.+|+++| .....+++++.+|+.+. + + .++||+|
T Consensus 22 ~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~-~-~------~~~fD~v 93 (284)
T 3gu3_A 22 KPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEI-E-L------NDKYDIA 93 (284)
T ss_dssp SCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTC-C-C------SSCEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhc-C-c------CCCeeEE
Confidence 567999999999999999999988668999999 12334899999999864 3 1 3689999
Q ss_pred EEcCCCc
Q 042171 71 FMDADKD 77 (125)
Q Consensus 71 ~id~~~~ 77 (125)
++.....
T Consensus 94 ~~~~~l~ 100 (284)
T 3gu3_A 94 ICHAFLL 100 (284)
T ss_dssp EEESCGG
T ss_pred EECChhh
Confidence 9976543
No 65
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.86 E-value=2.3e-09 Score=78.28 Aligned_cols=67 Identities=18% Similarity=0.329 Sum_probs=51.4
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHH-HHHHHhhcCCCCCce
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALS-VLDQLLKDSENEVNF 67 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~-~l~~~~~~~~~~~~f 67 (125)
++.+|||+|||+|..++.+++..+ +.+|+++| .++.++++++++|+.+ .+..+... ..++|
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~--~~~~f 141 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLN-GWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEE--SEIIY 141 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTC--CSCCB
T ss_pred CCCEEEEeCCChhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcc--cCCcc
Confidence 456999999999999999998876 68999999 4666789999999875 22222100 01579
Q ss_pred eEEEEc
Q 042171 68 DYAFMD 73 (125)
Q Consensus 68 D~v~id 73 (125)
|+|+++
T Consensus 142 D~i~~n 147 (254)
T 2h00_A 142 DFCMCN 147 (254)
T ss_dssp SEEEEC
T ss_pred cEEEEC
Confidence 999997
No 66
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=98.86 E-value=1.9e-09 Score=75.69 Aligned_cols=67 Identities=15% Similarity=0.234 Sum_probs=48.2
Q ss_pred CCCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe----------CCCC---CcEEEEecchHHHHHHHhhcCCCCCceeE
Q 042171 3 LKLKKTIEIGVFTGYSLFLTALTIPEDGQITAID----------ARVD---HKINFIESEALSVLDQLLKDSENEVNFDY 69 (125)
Q Consensus 3 ~~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD----------~~~~---~~i~~~~gd~~~~l~~~~~~~~~~~~fD~ 69 (125)
.++.+|||+|||+|..++.+++..+ +.+++++| ..+. .+++++++|+.+.++.... ..++||+
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~---~~~~fD~ 104 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACP-GVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIEWLIERAE---RGRPWHA 104 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCT-TEEEEEEECC-------------------CCHHHHHHHHHHHHH---TTCCBSE
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHhhhhhhhh---ccCcccE
Confidence 3567999999999999999999986 68999999 0111 1688999999885543111 1378999
Q ss_pred EEEc
Q 042171 70 AFMD 73 (125)
Q Consensus 70 v~id 73 (125)
|+++
T Consensus 105 i~~n 108 (215)
T 4dzr_A 105 IVSN 108 (215)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9985
No 67
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=98.86 E-value=8.8e-09 Score=75.91 Aligned_cols=71 Identities=15% Similarity=0.120 Sum_probs=55.0
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe------------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEE
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID------------ARVDHKINFIESEALSVLDQLLKDSENEVNFDYAF 71 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~ 71 (125)
...+|||+|||+|+.+..+|+.++++|+|+++| +.-..++..+.+|+.+... .. ...+++|+||
T Consensus 77 pG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~-~~---~~~~~vDvVf 152 (233)
T 4df3_A 77 EGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEK-YR---HLVEGVDGLY 152 (233)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGG-GT---TTCCCEEEEE
T ss_pred CCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccc-cc---cccceEEEEE
Confidence 346999999999999999999998899999999 2223579999998875311 11 1257899999
Q ss_pred EcCCCcC
Q 042171 72 MDADKDN 78 (125)
Q Consensus 72 id~~~~~ 78 (125)
+|...+.
T Consensus 153 ~d~~~~~ 159 (233)
T 4df3_A 153 ADVAQPE 159 (233)
T ss_dssp ECCCCTT
T ss_pred EeccCCh
Confidence 9877654
No 68
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.86 E-value=1.4e-08 Score=76.16 Aligned_cols=67 Identities=15% Similarity=0.184 Sum_probs=54.8
Q ss_pred CCCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe------------CC-----C-CCcEEEEecchHHHHHHHhhcCCCC
Q 042171 3 LKLKKTIEIGVFTGYSLFLTALTIPEDGQITAID------------AR-----V-DHKINFIESEALSVLDQLLKDSENE 64 (125)
Q Consensus 3 ~~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD------------~~-----~-~~~i~~~~gd~~~~l~~~~~~~~~~ 64 (125)
.++++|||||||+|..+..+++..+ ..+|+++| .. + .++++++.+|+.+.++.. .
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~------~ 149 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKS-VENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENV------T 149 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTT-CCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHC------C
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhC------C
Confidence 3678999999999999999998654 68999999 11 1 468999999999886653 4
Q ss_pred CceeEEEEcCCC
Q 042171 65 VNFDYAFMDADK 76 (125)
Q Consensus 65 ~~fD~v~id~~~ 76 (125)
++||+|++|...
T Consensus 150 ~~fD~Ii~d~~~ 161 (283)
T 2i7c_A 150 NTYDVIIVDSSD 161 (283)
T ss_dssp SCEEEEEEECCC
T ss_pred CCceEEEEcCCC
Confidence 789999998753
No 69
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=98.85 E-value=9.8e-09 Score=69.85 Aligned_cols=64 Identities=11% Similarity=0.026 Sum_probs=50.4
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
+..+|||+|||+|..++.+++..+ +++++| .++ +++++++|+.+.++.+... .++||
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~~---~~~~D 112 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGW---EAVLVEKDPEAVRLLKENVRRTGL--GARVVALPVEVFLPEAKAQ---GERFT 112 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTC---EEEEECCCHHHHHHHHHHHHHHTC--CCEEECSCHHHHHHHHHHT---TCCEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCC---eEEEEeCCHHHHHHHHHHHHHcCC--ceEEEeccHHHHHHhhhcc---CCceE
Confidence 567999999999999999998743 499999 233 7999999999876655321 24799
Q ss_pred EEEEcCC
Q 042171 69 YAFMDAD 75 (125)
Q Consensus 69 ~v~id~~ 75 (125)
+|+++..
T Consensus 113 ~i~~~~~ 119 (171)
T 1ws6_A 113 VAFMAPP 119 (171)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 9998643
No 70
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=98.85 E-value=5e-09 Score=74.36 Aligned_cols=70 Identities=21% Similarity=0.258 Sum_probs=54.8
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
+..+|||||||+|+.+..+++..++.++|+++| .++ ++++++.+|+.+.++. .++||
T Consensus 77 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~-------~~~fD 148 (215)
T 2yxe_A 77 PGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGY-DNVIVIVGDGTLGYEP-------LAPYD 148 (215)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTC-TTEEEEESCGGGCCGG-------GCCEE
T ss_pred CCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC-CCeEEEECCcccCCCC-------CCCee
Confidence 456999999999999999999885468999999 234 4699999998654331 36899
Q ss_pred EEEEcCCCcCCHH
Q 042171 69 YAFMDADKDNYCN 81 (125)
Q Consensus 69 ~v~id~~~~~~~~ 81 (125)
+|+++......++
T Consensus 149 ~v~~~~~~~~~~~ 161 (215)
T 2yxe_A 149 RIYTTAAGPKIPE 161 (215)
T ss_dssp EEEESSBBSSCCH
T ss_pred EEEECCchHHHHH
Confidence 9999877655543
No 71
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=98.84 E-value=7.4e-09 Score=76.62 Aligned_cols=65 Identities=20% Similarity=0.208 Sum_probs=52.8
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
++.+|||||||+|..+..+++. +.+|+++| .++.++++++.+|+.+..+ + ..++||
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~-----~~~~fD 138 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAER---GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVAS-H-----LETPVD 138 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGG-G-----CSSCEE
T ss_pred CCCEEEEeCCcchHHHHHHHHC---CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhh-h-----cCCCce
Confidence 4569999999999999999987 57999999 3555789999999987642 2 157899
Q ss_pred EEEEcCCCc
Q 042171 69 YAFMDADKD 77 (125)
Q Consensus 69 ~v~id~~~~ 77 (125)
+|++.....
T Consensus 139 ~v~~~~~l~ 147 (285)
T 4htf_A 139 LILFHAVLE 147 (285)
T ss_dssp EEEEESCGG
T ss_pred EEEECchhh
Confidence 999976543
No 72
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=98.84 E-value=5.7e-09 Score=74.85 Aligned_cols=70 Identities=17% Similarity=0.144 Sum_probs=53.1
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe------------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEE
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID------------ARVDHKINFIESEALSVLDQLLKDSENEVNFDYAF 71 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~ 71 (125)
+..+|||+|||+|..++.+++.+++.++|+++| +....+++++.+|+.+... +.. ..++||+|+
T Consensus 73 ~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~---~~~~~D~v~ 148 (227)
T 1g8a_A 73 PGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEE-YRA---LVPKVDVIF 148 (227)
T ss_dssp TTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGG-GTT---TCCCEEEEE
T ss_pred CCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcch-hhc---ccCCceEEE
Confidence 356899999999999999999876578999999 1112689999999986421 100 135799999
Q ss_pred EcCCCc
Q 042171 72 MDADKD 77 (125)
Q Consensus 72 id~~~~ 77 (125)
+|....
T Consensus 149 ~~~~~~ 154 (227)
T 1g8a_A 149 EDVAQP 154 (227)
T ss_dssp ECCCST
T ss_pred ECCCCH
Confidence 987743
No 73
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=98.84 E-value=8e-09 Score=76.34 Aligned_cols=69 Identities=12% Similarity=0.209 Sum_probs=52.1
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe-------------CC-----CCCcEEEEecchHHHHHHHhhcCCCCC
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID-------------AR-----VDHKINFIESEALSVLDQLLKDSENEV 65 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD-------------~~-----~~~~i~~~~gd~~~~l~~~~~~~~~~~ 65 (125)
+..+|||+|||+|..++.+++..+ +.+|+++| .. +.++++++++|+.+..+......-..+
T Consensus 36 ~~~~VLDlG~G~G~~~l~la~~~~-~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~ 114 (260)
T 2ozv_A 36 RACRIADLGAGAGAAGMAVAARLE-KAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDE 114 (260)
T ss_dssp SCEEEEECCSSSSHHHHHHHHHCT-TEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTT
T ss_pred CCCEEEEeCChHhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCC
Confidence 456999999999999999999987 68999999 11 234799999999887542210000146
Q ss_pred ceeEEEEc
Q 042171 66 NFDYAFMD 73 (125)
Q Consensus 66 ~fD~v~id 73 (125)
+||+|+++
T Consensus 115 ~fD~Vv~n 122 (260)
T 2ozv_A 115 HFHHVIMN 122 (260)
T ss_dssp CEEEEEEC
T ss_pred CcCEEEEC
Confidence 89999986
No 74
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=98.84 E-value=8.2e-09 Score=74.91 Aligned_cols=66 Identities=24% Similarity=0.280 Sum_probs=53.7
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
+..+|||||||+|..+..+++..+ ++|+++| .++.++++++.+|+.+. | + ..++||
T Consensus 46 ~~~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~-~-----~~~~fD 116 (257)
T 3f4k_A 46 DDAKIADIGCGTGGQTLFLADYVK--GQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNL-P-F-----QNEELD 116 (257)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHCC--SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC-S-S-----CTTCEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhC-C-C-----CCCCEE
Confidence 346999999999999999999985 4999999 56767899999999654 3 2 257899
Q ss_pred EEEEcCCCcC
Q 042171 69 YAFMDADKDN 78 (125)
Q Consensus 69 ~v~id~~~~~ 78 (125)
+|++......
T Consensus 117 ~v~~~~~l~~ 126 (257)
T 3f4k_A 117 LIWSEGAIYN 126 (257)
T ss_dssp EEEEESCSCC
T ss_pred EEEecChHhh
Confidence 9999866443
No 75
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=98.83 E-value=6.9e-09 Score=74.26 Aligned_cols=70 Identities=14% Similarity=0.170 Sum_probs=54.6
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCC----CCcEEEEecchHHHHHHHhhcCCCC
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARV----DHKINFIESEALSVLDQLLKDSENE 64 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~----~~~i~~~~gd~~~~l~~~~~~~~~~ 64 (125)
+..+|||||||+|+.+..+++.+++.++|+++| .++ .++++++.+|+.+..+. .
T Consensus 77 ~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~-------~ 149 (226)
T 1i1n_A 77 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAE-------E 149 (226)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGG-------G
T ss_pred CCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCccc-------C
Confidence 456999999999999999999875568999999 122 35899999998754221 3
Q ss_pred CceeEEEEcCCCcCCH
Q 042171 65 VNFDYAFMDADKDNYC 80 (125)
Q Consensus 65 ~~fD~v~id~~~~~~~ 80 (125)
++||+|+++......+
T Consensus 150 ~~fD~i~~~~~~~~~~ 165 (226)
T 1i1n_A 150 APYDAIHVGAAAPVVP 165 (226)
T ss_dssp CCEEEEEECSBBSSCC
T ss_pred CCcCEEEECCchHHHH
Confidence 6799999987765543
No 76
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=98.83 E-value=7.1e-09 Score=75.18 Aligned_cols=62 Identities=21% Similarity=0.186 Sum_probs=51.2
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
+..+|||||||+|..+..+++.. +.+++++| .++.++++++.+|+.+..+ .++||
T Consensus 36 ~~~~VLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~--------~~~fD 105 (256)
T 1nkv_A 36 PGTRILDLGSGSGEMLCTWARDH--GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA--------NEKCD 105 (256)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHT--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC--------SSCEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc--------CCCCC
Confidence 45699999999999999999987 47999999 4666789999999986521 37899
Q ss_pred EEEEcCC
Q 042171 69 YAFMDAD 75 (125)
Q Consensus 69 ~v~id~~ 75 (125)
+|++...
T Consensus 106 ~V~~~~~ 112 (256)
T 1nkv_A 106 VAACVGA 112 (256)
T ss_dssp EEEEESC
T ss_pred EEEECCC
Confidence 9998544
No 77
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=98.82 E-value=8.9e-09 Score=77.33 Aligned_cols=59 Identities=20% Similarity=0.218 Sum_probs=50.0
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCce-
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNF- 67 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~f- 67 (125)
+..+|||+|||+|..++.+++. + +.+|+++| .++.++++++++|+.+.++ ++|
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~-~-~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~~---------~~f~ 191 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKF-S-DAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFK---------EKFA 191 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHH-S-SCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGGG---------GGTT
T ss_pred CCCEEEEEeCchhHHHHHHHHC-C-CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhcc---------cccC
Confidence 3469999999999999999999 5 79999999 4666679999999987532 457
Q ss_pred --eEEEEc
Q 042171 68 --DYAFMD 73 (125)
Q Consensus 68 --D~v~id 73 (125)
|+|+++
T Consensus 192 ~~D~Ivsn 199 (284)
T 1nv8_A 192 SIEMILSN 199 (284)
T ss_dssp TCCEEEEC
T ss_pred CCCEEEEc
Confidence 999985
No 78
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.82 E-value=1.1e-08 Score=72.63 Aligned_cols=70 Identities=21% Similarity=0.162 Sum_probs=50.1
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe-CC--CCCcEEEEecchHHHH--HHHhhcCC--CCCceeEEEEcCCC
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID-AR--VDHKINFIESEALSVL--DQLLKDSE--NEVNFDYAFMDADK 76 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD-~~--~~~~i~~~~gd~~~~l--~~~~~~~~--~~~~fD~v~id~~~ 76 (125)
+..+|||+|||+|.++..+++. .++|+++| .. ...+++++++|+.+.. ..+..... ..++||+|++|+..
T Consensus 25 ~g~~VLDlG~G~G~~s~~la~~---~~~V~gvD~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~D~Vlsd~~~ 101 (191)
T 3dou_A 25 KGDAVIEIGSSPGGWTQVLNSL---ARKIISIDLQEMEEIAGVRFIRCDIFKETIFDDIDRALREEGIEKVDDVVSDAMA 101 (191)
T ss_dssp TTCEEEEESCTTCHHHHHHTTT---CSEEEEEESSCCCCCTTCEEEECCTTSSSHHHHHHHHHHHHTCSSEEEEEECCCC
T ss_pred CCCEEEEEeecCCHHHHHHHHc---CCcEEEEeccccccCCCeEEEEccccCHHHHHHHHHHhhcccCCcceEEecCCCc
Confidence 4579999999999999999987 68999999 22 2258999999987531 11100000 01489999999764
No 79
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=98.82 E-value=4.3e-09 Score=79.65 Aligned_cols=68 Identities=18% Similarity=0.188 Sum_probs=51.4
Q ss_pred CCCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe------------C-----C-C-CCcEEEEecchHHHHHHHhhcCCC
Q 042171 3 LKLKKTIEIGVFTGYSLFLTALTIPEDGQITAID------------A-----R-V-DHKINFIESEALSVLDQLLKDSEN 63 (125)
Q Consensus 3 ~~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD------------~-----~-~-~~~i~~~~gd~~~~l~~~~~~~~~ 63 (125)
.++++|||||||+|..+..+++..+ ..+|+++| . + + .++++++.+|+.+.++..
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~-~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~------ 154 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKN-VESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQT------ 154 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTT-CCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CC------
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhc------
Confidence 3678999999999999999998754 68999999 1 1 2 358999999998876532
Q ss_pred CCceeEEEEcCCCc
Q 042171 64 EVNFDYAFMDADKD 77 (125)
Q Consensus 64 ~~~fD~v~id~~~~ 77 (125)
.++||+|++|....
T Consensus 155 ~~~fDvIi~D~~~p 168 (294)
T 3adn_A 155 SQTFDVIISDCTDP 168 (294)
T ss_dssp CCCEEEEEECC---
T ss_pred CCCccEEEECCCCc
Confidence 57899999987643
No 80
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=98.82 E-value=7.6e-09 Score=76.64 Aligned_cols=63 Identities=19% Similarity=0.247 Sum_probs=52.7
Q ss_pred CCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeE
Q 042171 5 LKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFDY 69 (125)
Q Consensus 5 ~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~ 69 (125)
..+|||+|||+|..++.+++.+.+.++++++| .++.++++++.+|+.+.++ .++||+
T Consensus 113 ~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--------~~~~D~ 184 (277)
T 1o54_A 113 GDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFD--------EKDVDA 184 (277)
T ss_dssp TCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCS--------CCSEEE
T ss_pred CCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHccc--------CCccCE
Confidence 46999999999999999999976579999999 3555689999999987622 468999
Q ss_pred EEEcCC
Q 042171 70 AFMDAD 75 (125)
Q Consensus 70 v~id~~ 75 (125)
|++|..
T Consensus 185 V~~~~~ 190 (277)
T 1o54_A 185 LFLDVP 190 (277)
T ss_dssp EEECCS
T ss_pred EEECCc
Confidence 999754
No 81
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.81 E-value=9.3e-09 Score=81.37 Aligned_cols=71 Identities=23% Similarity=0.240 Sum_probs=52.5
Q ss_pred CCCCEEEEEcCc------ccHHHHHHHhhCCCCCEEEEEe-----CCCCCcEEEEecchHHH--HHHHhhcCCCCCceeE
Q 042171 3 LKLKKTIEIGVF------TGYSLFLTALTIPEDGQITAID-----ARVDHKINFIESEALSV--LDQLLKDSENEVNFDY 69 (125)
Q Consensus 3 ~~~~~vLeiG~g------~G~~t~~la~~~~~~~~v~~iD-----~~~~~~i~~~~gd~~~~--l~~~~~~~~~~~~fD~ 69 (125)
.++.+||||||| +|.+++.+++...++++|+++| ....++|+++++|+.+. +..+.. ..++||+
T Consensus 215 ~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~~~~~rI~fv~GDa~dlpf~~~l~~---~d~sFDl 291 (419)
T 3sso_A 215 NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSHVDELRIRTIQGDQNDAEFLDRIAR---RYGPFDI 291 (419)
T ss_dssp TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGGGCBTTEEEEECCTTCHHHHHHHHH---HHCCEEE
T ss_pred CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHhhcCCCcEEEEecccccchhhhhhc---ccCCccE
Confidence 467899999999 7788888887653379999999 22346899999999864 111111 0378999
Q ss_pred EEEcCCC
Q 042171 70 AFMDADK 76 (125)
Q Consensus 70 v~id~~~ 76 (125)
|++|+.+
T Consensus 292 VisdgsH 298 (419)
T 3sso_A 292 VIDDGSH 298 (419)
T ss_dssp EEECSCC
T ss_pred EEECCcc
Confidence 9999875
No 82
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=98.81 E-value=8.6e-09 Score=78.11 Aligned_cols=69 Identities=19% Similarity=0.315 Sum_probs=55.5
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
+..+|||||||+|..++.+++..+++++|+++| .++ ++++++.+|+.+.++. .++||
T Consensus 75 ~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~-~~v~~~~~d~~~~~~~-------~~~fD 146 (317)
T 1dl5_A 75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGI-ENVIFVCGDGYYGVPE-------FSPYD 146 (317)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTC-CSEEEEESCGGGCCGG-------GCCEE
T ss_pred CcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCC-CCeEEEECChhhcccc-------CCCeE
Confidence 456999999999999999999876458999999 355 3599999999875432 36899
Q ss_pred EEEEcCCCcCCH
Q 042171 69 YAFMDADKDNYC 80 (125)
Q Consensus 69 ~v~id~~~~~~~ 80 (125)
+|+++...+..+
T Consensus 147 ~Iv~~~~~~~~~ 158 (317)
T 1dl5_A 147 VIFVTVGVDEVP 158 (317)
T ss_dssp EEEECSBBSCCC
T ss_pred EEEEcCCHHHHH
Confidence 999987765544
No 83
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.80 E-value=2.9e-08 Score=77.50 Aligned_cols=67 Identities=12% Similarity=0.194 Sum_probs=54.0
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCC-cEEEEecchHHHHHHHhhcCCCCCce
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDH-KINFIESEALSVLDQLLKDSENEVNF 67 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~-~i~~~~gd~~~~l~~~~~~~~~~~~f 67 (125)
+..+|||+|||+|..++.+|+. + ..+|+++| .++.+ +++++.+|+.+.++.+... ..+|
T Consensus 212 ~~~~VLDl~cGtG~~sl~la~~-g-a~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~---~~~f 286 (385)
T 2b78_A 212 AGKTVLNLFSYTAAFSVAAAMG-G-AMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRH---HLTY 286 (385)
T ss_dssp BTCEEEEETCTTTHHHHHHHHT-T-BSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHT---TCCE
T ss_pred CCCeEEEEeeccCHHHHHHHHC-C-CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHh---CCCc
Confidence 4579999999999999999985 2 35899999 45655 8999999999987765321 3589
Q ss_pred eEEEEcCC
Q 042171 68 DYAFMDAD 75 (125)
Q Consensus 68 D~v~id~~ 75 (125)
|+|++|..
T Consensus 287 D~Ii~DPP 294 (385)
T 2b78_A 287 DIIIIDPP 294 (385)
T ss_dssp EEEEECCC
T ss_pred cEEEECCC
Confidence 99999854
No 84
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=98.80 E-value=1.3e-08 Score=76.25 Aligned_cols=32 Identities=13% Similarity=0.240 Sum_probs=29.7
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID 36 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD 36 (125)
+.++|||||||+|..++.+++.++ ..+|+++|
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~-~~~v~gvD 77 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWG-PSRMVGLD 77 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTC-CSEEEEEE
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcC-CCEEEEEC
Confidence 467999999999999999999987 68999999
No 85
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=98.80 E-value=5.4e-09 Score=75.45 Aligned_cols=66 Identities=18% Similarity=0.200 Sum_probs=52.3
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe-C-----------CCCCcEEEEecchHHH--HHHHhhcCCCCCceeE
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID-A-----------RVDHKINFIESEALSV--LDQLLKDSENEVNFDY 69 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD-~-----------~~~~~i~~~~gd~~~~--l~~~~~~~~~~~~fD~ 69 (125)
...+|||+|||+|..+.++++.+++.++|+++| + ....+++++.+|+.+. ++.. .++||+
T Consensus 77 ~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~~~------~~~~D~ 150 (233)
T 2ipx_A 77 PGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRML------IAMVDV 150 (233)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGGGG------CCCEEE
T ss_pred CCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhhccc------CCcEEE
Confidence 346999999999999999999985478999999 1 1126899999999874 2322 468999
Q ss_pred EEEcCC
Q 042171 70 AFMDAD 75 (125)
Q Consensus 70 v~id~~ 75 (125)
|++|..
T Consensus 151 V~~~~~ 156 (233)
T 2ipx_A 151 IFADVA 156 (233)
T ss_dssp EEECCC
T ss_pred EEEcCC
Confidence 999876
No 86
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.79 E-value=1.5e-08 Score=81.28 Aligned_cols=64 Identities=11% Similarity=0.159 Sum_probs=54.1
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
...+|||+|||+|..|+.+|+.++..++|+++| .++. ++++.+|+.+..+.+ .++||
T Consensus 101 ~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~--v~~~~~Da~~l~~~~------~~~FD 172 (464)
T 3m6w_A 101 PGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP--LAVTQAPPRALAEAF------GTYFH 172 (464)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC--CEEECSCHHHHHHHH------CSCEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe--EEEEECCHHHhhhhc------cccCC
Confidence 456999999999999999999998679999999 3563 999999998874433 47899
Q ss_pred EEEEcCC
Q 042171 69 YAFMDAD 75 (125)
Q Consensus 69 ~v~id~~ 75 (125)
.|++|+.
T Consensus 173 ~Il~D~P 179 (464)
T 3m6w_A 173 RVLLDAP 179 (464)
T ss_dssp EEEEECC
T ss_pred EEEECCC
Confidence 9999865
No 87
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=98.79 E-value=2e-08 Score=67.93 Aligned_cols=68 Identities=15% Similarity=0.179 Sum_probs=52.6
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe-CCC--CCcEEEEecchHHH-----HHH-HhhcCCCCCceeEEEEcC
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID-ARV--DHKINFIESEALSV-----LDQ-LLKDSENEVNFDYAFMDA 74 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD-~~~--~~~i~~~~gd~~~~-----l~~-~~~~~~~~~~fD~v~id~ 74 (125)
+..+|||+|||+|..+..+++.++++.+++++| ... ..+++++.+|+.+. ++. + +.++||+|+++.
T Consensus 22 ~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~~~~D~i~~~~ 96 (180)
T 1ej0_A 22 PGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLPMDPIVGVDFLQGDFRDELVMKALLERV-----GDSKVQVVMSDM 96 (180)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSCCCCCTTEEEEESCTTSHHHHHHHHHHH-----TTCCEEEEEECC
T ss_pred CCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECccccccCcEEEEEcccccchhhhhhhccC-----CCCceeEEEECC
Confidence 456999999999999999999875468999999 222 15799999999764 111 2 146899999976
Q ss_pred CC
Q 042171 75 DK 76 (125)
Q Consensus 75 ~~ 76 (125)
..
T Consensus 97 ~~ 98 (180)
T 1ej0_A 97 AP 98 (180)
T ss_dssp CC
T ss_pred Cc
Confidence 54
No 88
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=98.79 E-value=8.1e-09 Score=72.76 Aligned_cols=69 Identities=17% Similarity=0.249 Sum_probs=54.4
Q ss_pred CCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeE
Q 042171 5 LKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFDY 69 (125)
Q Consensus 5 ~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~ 69 (125)
..+|||+|||+|..++.+++..| +.+++++| .++. +++++.+|+.+..+ .++||+
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~--------~~~~D~ 135 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSIVRP-EAHFTLLDSLGKRVRFLRQVQHELKLE-NIEPVQSRVEEFPS--------EPPFDG 135 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHTTCS-SEEEEECCTTTSCC--------CSCEEE
T ss_pred CCeEEEECCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHcCCC-CeEEEecchhhCCc--------cCCcCE
Confidence 57999999999999999999887 78999999 3443 49999999986521 468999
Q ss_pred EEEcCCCcCCHHHHh
Q 042171 70 AFMDADKDNYCNYMR 84 (125)
Q Consensus 70 v~id~~~~~~~~~~~ 84 (125)
|++.+. ..+..+++
T Consensus 136 i~~~~~-~~~~~~l~ 149 (207)
T 1jsx_A 136 VISRAF-ASLNDMVS 149 (207)
T ss_dssp EECSCS-SSHHHHHH
T ss_pred EEEecc-CCHHHHHH
Confidence 997543 34455555
No 89
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=98.79 E-value=1.6e-08 Score=73.92 Aligned_cols=66 Identities=18% Similarity=0.156 Sum_probs=52.5
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe--------C------------CCCCcEEEEecchHHHHHHHhhcCCC
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID--------A------------RVDHKINFIESEALSVLDQLLKDSEN 63 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD--------~------------~~~~~i~~~~gd~~~~l~~~~~~~~~ 63 (125)
+..+|||||||+|..++.||+..| +.+++++| + ....+++++.+|+.+.++... +
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~p-~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~----~ 120 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLFP-DTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFF----Y 120 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGST-TSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHC----C
T ss_pred CCCeEEEEccCCcHHHHHHHHHCC-CCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhC----C
Confidence 345899999999999999999887 78999999 0 123689999999987556421 2
Q ss_pred CCceeEEEEcC
Q 042171 64 EVNFDYAFMDA 74 (125)
Q Consensus 64 ~~~fD~v~id~ 74 (125)
.++||.|++..
T Consensus 121 ~~~~D~v~~~~ 131 (235)
T 3ckk_A 121 KGQLTKMFFLF 131 (235)
T ss_dssp TTCEEEEEEES
T ss_pred CcCeeEEEEeC
Confidence 57899999854
No 90
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.78 E-value=1.4e-08 Score=81.21 Aligned_cols=65 Identities=14% Similarity=0.118 Sum_probs=55.1
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
...+|||+|||+|..|+.+|+.++..++|+++| .++ .+++++.+|+.+..+.+ .++||
T Consensus 105 ~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~-~nv~v~~~Da~~l~~~~------~~~FD 177 (456)
T 3m4x_A 105 PGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGV-SNAIVTNHAPAELVPHF------SGFFD 177 (456)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTC-SSEEEECCCHHHHHHHH------TTCEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCC-CceEEEeCCHHHhhhhc------cccCC
Confidence 456999999999999999999987679999999 456 47999999998875444 47899
Q ss_pred EEEEcCC
Q 042171 69 YAFMDAD 75 (125)
Q Consensus 69 ~v~id~~ 75 (125)
.|++|+.
T Consensus 178 ~Il~DaP 184 (456)
T 3m4x_A 178 RIVVDAP 184 (456)
T ss_dssp EEEEECC
T ss_pred EEEECCC
Confidence 9999975
No 91
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=98.78 E-value=1.3e-08 Score=75.35 Aligned_cols=60 Identities=23% Similarity=0.350 Sum_probs=50.5
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
++.+|||+|||+|..++.+++..+ +.+|+++| .++ ++++++++|+.+.++ .++||
T Consensus 109 ~~~~vLDlG~GsG~~~~~la~~~~-~~~v~~vD~s~~~l~~a~~n~~~~~~-~~v~~~~~d~~~~~~--------~~~fD 178 (276)
T 2b3t_A 109 QPCRILDLGTGTGAIALALASERP-DCEIIAVDRMPDAVSLAQRNAQHLAI-KNIHILQSDWFSALA--------GQQFA 178 (276)
T ss_dssp SCCEEEEETCTTSHHHHHHHHHCT-TSEEEEECSSHHHHHHHHHHHHHHTC-CSEEEECCSTTGGGT--------TCCEE
T ss_pred CCCEEEEecCCccHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCC-CceEEEEcchhhhcc--------cCCcc
Confidence 456999999999999999999887 78999999 244 379999999987532 36899
Q ss_pred EEEEc
Q 042171 69 YAFMD 73 (125)
Q Consensus 69 ~v~id 73 (125)
+|+++
T Consensus 179 ~Iv~n 183 (276)
T 2b3t_A 179 MIVSN 183 (276)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99986
No 92
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.78 E-value=8.2e-09 Score=78.58 Aligned_cols=68 Identities=15% Similarity=0.287 Sum_probs=50.8
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe-------------C--C----------CCCcEEEEecchHHHHHHHh
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID-------------A--R----------VDHKINFIESEALSVLDQLL 58 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD-------------~--~----------~~~~i~~~~gd~~~~l~~~~ 58 (125)
+..+|||+|||+|+.++.+++.+++.++|+++| . + ...+++++.+|+.+.++.+.
T Consensus 105 ~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~~ 184 (336)
T 2b25_A 105 PGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDIK 184 (336)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC----
T ss_pred CCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcccccC
Confidence 456999999999999999999875579999999 1 1 23689999999987643331
Q ss_pred hcCCCCCceeEEEEcCCC
Q 042171 59 KDSENEVNFDYAFMDADK 76 (125)
Q Consensus 59 ~~~~~~~~fD~v~id~~~ 76 (125)
.++||+|++|...
T Consensus 185 -----~~~fD~V~~~~~~ 197 (336)
T 2b25_A 185 -----SLTFDAVALDMLN 197 (336)
T ss_dssp --------EEEEEECSSS
T ss_pred -----CCCeeEEEECCCC
Confidence 3579999998654
No 93
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=98.77 E-value=1.6e-08 Score=72.43 Aligned_cols=67 Identities=19% Similarity=0.306 Sum_probs=53.3
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe------------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEE
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID------------ARVDHKINFIESEALSVLDQLLKDSENEVNFDYAF 71 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~ 71 (125)
++.+|||||||+|..+..+++..| +.+++++| .....+++++.+|+.+. + + .++||+|+
T Consensus 44 ~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~-~-~------~~~fD~v~ 114 (234)
T 3dtn_A 44 ENPDILDLGAGTGLLSAFLMEKYP-EATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKY-D-F------EEKYDMVV 114 (234)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTC-C-C------CSCEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHhhccCCCEEEEeCchhcc-C-C------CCCceEEE
Confidence 567999999999999999999987 78999999 11223899999999765 2 1 37899999
Q ss_pred EcCCCcCC
Q 042171 72 MDADKDNY 79 (125)
Q Consensus 72 id~~~~~~ 79 (125)
+.......
T Consensus 115 ~~~~l~~~ 122 (234)
T 3dtn_A 115 SALSIHHL 122 (234)
T ss_dssp EESCGGGS
T ss_pred EeCccccC
Confidence 97654433
No 94
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.77 E-value=2.1e-08 Score=85.35 Aligned_cols=111 Identities=12% Similarity=0.076 Sum_probs=81.7
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe----------C-----------CCCCcEEEEecchHHHHHHHhhcCC
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID----------A-----------RVDHKINFIESEALSVLDQLLKDSE 62 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD----------~-----------~~~~~i~~~~gd~~~~l~~~~~~~~ 62 (125)
++.+|||||||+|..++.|++..++..+|+++| . ++ .+++++++|+.+. +.
T Consensus 721 ~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl-~nVefiqGDa~dL-p~------ 792 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNV-KSATLYDGSILEF-DS------ 792 (950)
T ss_dssp CCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSC-SEEEEEESCTTSC-CT------
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCC-CceEEEECchHhC-Cc------
Confidence 567999999999999999999875468999999 1 23 5899999999875 22
Q ss_pred CCCceeEEEEcCCCcCCHH-----HHhh-------------------h--CCC----------------------CCCcc
Q 042171 63 NEVNFDYAFMDADKDNYCN-----YMRE-------------------Q--VPD----------------------HFRGS 94 (125)
Q Consensus 63 ~~~~fD~v~id~~~~~~~~-----~~~~-------------------~--~~~----------------------~~~~~ 94 (125)
..++||+|++.....+.++ +++. + ... +.-..
T Consensus 793 ~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG~LIISTPN~eyN~lF~~Lnp~tr~~dPd~~~~~~fRh~DHrFEW 872 (950)
T 3htx_A 793 RLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPKLLIVSTPNYEFNTILQRSTPETQEENNSEPQLPKFRNHDHKFEW 872 (950)
T ss_dssp TSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCSEEEEEECBGGGHHHHTCC------------CCSSCSCSSCSCCB
T ss_pred ccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCCEEEEEecCchhhhhhhhcccccccccccccccccccccCcceee
Confidence 1578999999766554432 2220 0 000 00114
Q ss_pred hHHHHHHHHHHhhcCCCeEEEEeecCCc
Q 042171 95 SKQAILDLNRSLVDDPCVQLSHVALGES 122 (125)
Q Consensus 95 ~~~~~~~~~~~l~~~~~~~~~~lp~~~G 122 (125)
..+..+++.+.+.+..+|++.+.++|+|
T Consensus 873 TReEFr~Wae~LAer~GYsVefvGVGDg 900 (950)
T 3htx_A 873 TREQFNQWASKLGKRHNYSVEFSGVGGS 900 (950)
T ss_dssp CHHHHHHHHHHHHHHTTEEEEEEEESSC
T ss_pred cHHHHHHHHHHHHHhcCcEEEEEccCCC
Confidence 5677888889999999999999999998
No 95
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=98.77 E-value=1.6e-08 Score=76.97 Aligned_cols=64 Identities=25% Similarity=0.303 Sum_probs=52.9
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
...+|||+|||+|..|+.+++.+++.++|+++| .++ .+++++.+|+.+..+ . .++||
T Consensus 118 ~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~-~~v~~~~~D~~~~~~-~------~~~fD 189 (315)
T 1ixk_A 118 PGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGV-LNVILFHSSSLHIGE-L------NVEFD 189 (315)
T ss_dssp TTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTC-CSEEEESSCGGGGGG-G------CCCEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCC-CeEEEEECChhhccc-c------cccCC
Confidence 346999999999999999999987679999999 355 479999999987632 2 46899
Q ss_pred EEEEcCC
Q 042171 69 YAFMDAD 75 (125)
Q Consensus 69 ~v~id~~ 75 (125)
.|++|+.
T Consensus 190 ~Il~d~P 196 (315)
T 1ixk_A 190 KILLDAP 196 (315)
T ss_dssp EEEEECC
T ss_pred EEEEeCC
Confidence 9999854
No 96
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=98.77 E-value=1.9e-08 Score=75.03 Aligned_cols=71 Identities=18% Similarity=0.163 Sum_probs=53.4
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------C-CCCCcEEEEecchHHHHHHHhh-cCCCCCc
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------A-RVDHKINFIESEALSVLDQLLK-DSENEVN 66 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~-~~~~~i~~~~gd~~~~l~~~~~-~~~~~~~ 66 (125)
+..+|||||||+|..+..+++.+++..+|+++| . +...+++++++|+.+. + +.. .....++
T Consensus 36 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~-~-~~~~~~~~~~~ 113 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDF-K-FLGADSVDKQK 113 (299)
T ss_dssp CCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCC-G-GGCTTTTTSSC
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhC-C-ccccccccCCC
Confidence 567999999999999999999874479999999 1 3467999999999865 2 210 0000268
Q ss_pred eeEEEEcCCC
Q 042171 67 FDYAFMDADK 76 (125)
Q Consensus 67 fD~v~id~~~ 76 (125)
||+|++....
T Consensus 114 fD~V~~~~~l 123 (299)
T 3g5t_A 114 IDMITAVECA 123 (299)
T ss_dssp EEEEEEESCG
T ss_pred eeEEeHhhHH
Confidence 9999997553
No 97
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.77 E-value=2.5e-08 Score=81.33 Aligned_cols=60 Identities=22% Similarity=0.281 Sum_probs=49.8
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
++.+|||||||.|..+.+||+. +++|++|| .+. -+|++.++++.+....+ ..++||
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~---ga~V~giD~~~~~i~~a~~~a~~~~~-~~~~~~~~~~~~~~~~~-----~~~~fD 136 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASK---GATIVGIDFQQENINVCRALAEENPD-FAAEFRVGRIEEVIAAL-----EEGEFD 136 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHTSTT-SEEEEEECCHHHHHHHC-----CTTSCS
T ss_pred CCCeEEEECCCCcHHHHHHHhC---CCEEEEECCCHHHHHHHHHHHHhcCC-CceEEEECCHHHHhhhc-----cCCCcc
Confidence 5779999999999999999986 78999999 222 37999999999875543 247899
Q ss_pred EEEE
Q 042171 69 YAFM 72 (125)
Q Consensus 69 ~v~i 72 (125)
+|++
T Consensus 137 ~v~~ 140 (569)
T 4azs_A 137 LAIG 140 (569)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9996
No 98
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=98.77 E-value=2.6e-08 Score=74.37 Aligned_cols=61 Identities=7% Similarity=-0.068 Sum_probs=51.4
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
+..+|||||||+|..++.+++..+ .+|+++| .++.++++++.+|+.+. .++||
T Consensus 72 ~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----------~~~fD 139 (302)
T 3hem_A 72 PGMTLLDIGCGWGSTMRHAVAEYD--VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF----------DEPVD 139 (302)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHC--CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC----------CCCCS
T ss_pred CcCEEEEeeccCcHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc----------CCCcc
Confidence 345999999999999999999875 7899999 46767899999999754 37899
Q ss_pred EEEEcCCC
Q 042171 69 YAFMDADK 76 (125)
Q Consensus 69 ~v~id~~~ 76 (125)
+|++....
T Consensus 140 ~v~~~~~~ 147 (302)
T 3hem_A 140 RIVSLGAF 147 (302)
T ss_dssp EEEEESCG
T ss_pred EEEEcchH
Confidence 99986543
No 99
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=98.76 E-value=2.6e-08 Score=76.50 Aligned_cols=66 Identities=18% Similarity=0.360 Sum_probs=52.4
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCC-cEEEEecchHHHHHHHhhcCCCCCce
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDH-KINFIESEALSVLDQLLKDSENEVNF 67 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~-~i~~~~gd~~~~l~~~~~~~~~~~~f 67 (125)
+..+|||+|||+|..++.+++. +.+|+++| .++.+ +++++++|+.+.++.+... .++|
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~~---ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~---~~~f 226 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAAA---GAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERR---GSTY 226 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT---TCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHH---TCCB
T ss_pred CCCcEEEcccccCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhc---CCCc
Confidence 3569999999999999999985 45999999 35554 5999999999987654211 3689
Q ss_pred eEEEEcCC
Q 042171 68 DYAFMDAD 75 (125)
Q Consensus 68 D~v~id~~ 75 (125)
|+|++|..
T Consensus 227 D~Ii~dPP 234 (332)
T 2igt_A 227 DIILTDPP 234 (332)
T ss_dssp SEEEECCC
T ss_pred eEEEECCc
Confidence 99999754
No 100
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=98.75 E-value=9.5e-09 Score=72.31 Aligned_cols=65 Identities=18% Similarity=0.227 Sum_probs=52.9
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
++.+|||||||+|..+..+++. + +.+++++| .++.++++++.+|+.+. + + ..++||
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~-~-~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~-~-----~~~~~D 113 (219)
T 3dlc_A 43 TAGTCIDIGSGPGALSIALAKQ-S-DFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNI-P-I-----EDNYAD 113 (219)
T ss_dssp CEEEEEEETCTTSHHHHHHHHH-S-EEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBC-S-S-----CTTCEE
T ss_pred CCCEEEEECCCCCHHHHHHHHc-C-CCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHC-C-C-----Cccccc
Confidence 3459999999999999999998 4 68999999 45667899999999764 2 2 257899
Q ss_pred EEEEcCCCc
Q 042171 69 YAFMDADKD 77 (125)
Q Consensus 69 ~v~id~~~~ 77 (125)
+|++.....
T Consensus 114 ~v~~~~~l~ 122 (219)
T 3dlc_A 114 LIVSRGSVF 122 (219)
T ss_dssp EEEEESCGG
T ss_pred EEEECchHh
Confidence 999976543
No 101
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.75 E-value=3.5e-08 Score=68.81 Aligned_cols=72 Identities=11% Similarity=0.128 Sum_probs=51.2
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCC--------CEEEEEe-CCC--CCcEEEE-ecchHHHHHH--HhhcCCCCCceeE
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPED--------GQITAID-ARV--DHKINFI-ESEALSVLDQ--LLKDSENEVNFDY 69 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~--------~~v~~iD-~~~--~~~i~~~-~gd~~~~l~~--~~~~~~~~~~fD~ 69 (125)
+..+|||+|||+|..++.+++.++.. ++|+++| ... ..+++++ .+|..+.... +... .+.++||+
T Consensus 22 ~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~~~~~~~~~~~d~~~~~~~~~~~~~-~~~~~fD~ 100 (196)
T 2nyu_A 22 PGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFPLEGATFLCPADVTDPRTSQRILEV-LPGRRADV 100 (196)
T ss_dssp TTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCCCTTCEEECSCCTTSHHHHHHHHHH-SGGGCEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcccCCCCeEEEeccCCCHHHHHHHHHh-cCCCCCcE
Confidence 45799999999999999999998743 8999999 221 2578999 9987643110 0000 01357999
Q ss_pred EEEcCCC
Q 042171 70 AFMDADK 76 (125)
Q Consensus 70 v~id~~~ 76 (125)
|+++...
T Consensus 101 V~~~~~~ 107 (196)
T 2nyu_A 101 ILSDMAP 107 (196)
T ss_dssp EEECCCC
T ss_pred EEeCCCC
Confidence 9998643
No 102
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=98.74 E-value=7.6e-09 Score=73.64 Aligned_cols=63 Identities=3% Similarity=-0.140 Sum_probs=49.1
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe------------CCC--------------CCcEEEEecchHHHHHHH
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID------------ARV--------------DHKINFIESEALSVLDQL 57 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD------------~~~--------------~~~i~~~~gd~~~~l~~~ 57 (125)
+..+|||+|||+|..+.+|++. +.+|+++| ... ..+++++++|+.+..+.-
T Consensus 22 ~~~~vLD~GCG~G~~~~~la~~---g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~ 98 (203)
T 1pjz_A 22 PGARVLVPLCGKSQDMSWLSGQ---GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARD 98 (203)
T ss_dssp TTCEEEETTTCCSHHHHHHHHH---CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHH
T ss_pred CCCEEEEeCCCCcHhHHHHHHC---CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCccc
Confidence 4679999999999999999996 57999999 221 357999999998763210
Q ss_pred hhcCCCCCceeEEEEcCC
Q 042171 58 LKDSENEVNFDYAFMDAD 75 (125)
Q Consensus 58 ~~~~~~~~~fD~v~id~~ 75 (125)
.++||+|++.+.
T Consensus 99 ------~~~fD~v~~~~~ 110 (203)
T 1pjz_A 99 ------IGHCAAFYDRAA 110 (203)
T ss_dssp ------HHSEEEEEEESC
T ss_pred ------CCCEEEEEECcc
Confidence 168999997544
No 103
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=98.73 E-value=7.9e-09 Score=71.64 Aligned_cols=60 Identities=15% Similarity=0.247 Sum_probs=48.3
Q ss_pred CCCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe-----CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEEEcC
Q 042171 3 LKLKKTIEIGVFTGYSLFLTALTIPEDGQITAID-----ARVDHKINFIESEALSVLDQLLKDSENEVNFDYAFMDA 74 (125)
Q Consensus 3 ~~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD-----~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~id~ 74 (125)
.+..+|||+|||+|..++.+++.. +|+++| .....+++++++|+.+.++ .++||+|+++.
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~~----~v~gvD~s~~~~~~~~~~~~~~~d~~~~~~--------~~~fD~i~~n~ 86 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKRN----TVVSTDLNIRALESHRGGNLVRADLLCSIN--------QESVDVVVFNP 86 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTTS----EEEEEESCHHHHHTCSSSCEEECSTTTTBC--------GGGCSEEEECC
T ss_pred CCCCeEEEeccCccHHHHHHHhcC----cEEEEECCHHHHhcccCCeEEECChhhhcc--------cCCCCEEEECC
Confidence 356799999999999999999864 999999 1125789999999987422 37899999854
No 104
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=98.73 E-value=3.4e-08 Score=74.73 Aligned_cols=68 Identities=16% Similarity=0.132 Sum_probs=53.5
Q ss_pred CCCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe------------C------CCCCcEEEEecchHHHHHHHhhcCCCC
Q 042171 3 LKLKKTIEIGVFTGYSLFLTALTIPEDGQITAID------------A------RVDHKINFIESEALSVLDQLLKDSENE 64 (125)
Q Consensus 3 ~~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD------------~------~~~~~i~~~~gd~~~~l~~~~~~~~~~ 64 (125)
.++.+|||||||+|..+..+++..+ ..+|+++| . ....+++++.+|+.+.+... ..
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~-----~~ 167 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGT-VEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQT-----PD 167 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTT-CCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSS-----CT
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhc-----cC
Confidence 3578999999999999999998654 68999999 1 12368999999999875421 14
Q ss_pred CceeEEEEcCCC
Q 042171 65 VNFDYAFMDADK 76 (125)
Q Consensus 65 ~~fD~v~id~~~ 76 (125)
++||+|++|...
T Consensus 168 ~~fDvIi~d~~~ 179 (304)
T 3bwc_A 168 NTYDVVIIDTTD 179 (304)
T ss_dssp TCEEEEEEECC-
T ss_pred CceeEEEECCCC
Confidence 789999998754
No 105
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=98.73 E-value=3.2e-08 Score=71.36 Aligned_cols=67 Identities=18% Similarity=0.092 Sum_probs=51.0
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe------------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEE
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID------------ARVDHKINFIESEALSVLDQLLKDSENEVNFDYAF 71 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~ 71 (125)
+..+|||+|||+|..++++++.++ .++|+++| +...++++++.+|+.+....+. ..++||+|+
T Consensus 74 ~~~~VLDlGcG~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~----~~~~~D~v~ 148 (230)
T 1fbn_A 74 RDSKILYLGASAGTTPSHVADIAD-KGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYAN----IVEKVDVIY 148 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHHHHTT-TSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTT----TSCCEEEEE
T ss_pred CCCEEEEEcccCCHHHHHHHHHcC-CcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccc----cCccEEEEE
Confidence 356899999999999999999987 78999999 2223689999999976211010 036799999
Q ss_pred EcCC
Q 042171 72 MDAD 75 (125)
Q Consensus 72 id~~ 75 (125)
.+..
T Consensus 149 ~~~~ 152 (230)
T 1fbn_A 149 EDVA 152 (230)
T ss_dssp ECCC
T ss_pred EecC
Confidence 7643
No 106
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=98.73 E-value=1.7e-08 Score=72.95 Aligned_cols=68 Identities=15% Similarity=0.235 Sum_probs=52.5
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
+..+|||||||+|+.++.+++..+ ++|+++| .++ .+++++.+|+...++. ..+||
T Consensus 91 ~~~~vLdiG~G~G~~~~~la~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~-------~~~fD 160 (235)
T 1jg1_A 91 PGMNILEVGTGSGWNAALISEIVK--TDVYTIERIPELVEFAKRNLERAGV-KNVHVILGDGSKGFPP-------KAPYD 160 (235)
T ss_dssp TTCCEEEECCTTSHHHHHHHHHHC--SCEEEEESCHHHHHHHHHHHHHTTC-CSEEEEESCGGGCCGG-------GCCEE
T ss_pred CCCEEEEEeCCcCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcCC-CCcEEEECCcccCCCC-------CCCcc
Confidence 456899999999999999999875 7899999 344 3599999998433221 34699
Q ss_pred EEEEcCCCcCCHH
Q 042171 69 YAFMDADKDNYCN 81 (125)
Q Consensus 69 ~v~id~~~~~~~~ 81 (125)
+|+++......++
T Consensus 161 ~Ii~~~~~~~~~~ 173 (235)
T 1jg1_A 161 VIIVTAGAPKIPE 173 (235)
T ss_dssp EEEECSBBSSCCH
T ss_pred EEEECCcHHHHHH
Confidence 9999877655543
No 107
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.72 E-value=2.3e-08 Score=80.41 Aligned_cols=65 Identities=12% Similarity=0.212 Sum_probs=53.8
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
...+|||+|||+|..|+.+|+.++..++|+++| .++ .+++++++|+.+..+.. .++||
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~-~nv~~~~~D~~~~~~~~------~~~fD 189 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGI-SNVALTHFDGRVFGAAV------PEMFD 189 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTC-CSEEEECCCSTTHHHHS------TTCEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEeCCHHHhhhhc------cccCC
Confidence 456999999999999999999997679999999 355 47999999998763322 46899
Q ss_pred EEEEcCC
Q 042171 69 YAFMDAD 75 (125)
Q Consensus 69 ~v~id~~ 75 (125)
.|++|+.
T Consensus 190 ~Il~D~P 196 (479)
T 2frx_A 190 AILLDAP 196 (479)
T ss_dssp EEEEECC
T ss_pred EEEECCC
Confidence 9999854
No 108
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.72 E-value=6.4e-08 Score=70.96 Aligned_cols=90 Identities=17% Similarity=0.140 Sum_probs=63.9
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe--------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEEEcCC
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID--------ARVDHKINFIESEALSVLDQLLKDSENEVNFDYAFMDAD 75 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD--------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~id~~ 75 (125)
++.+|||||||+|..+..+++ + +.+|+++| +.-..+++++.+|+.+. + + +.++||+|++...
T Consensus 34 ~~~~vLDiGcG~G~~~~~l~~--~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~d~~~~-~-~-----~~~~fD~v~~~~~ 103 (261)
T 3ege_A 34 KGSVIADIGAGTGGYSVALAN--Q-GLFVYAVEPSIVMRQQAVVHPQVEWFTGYAENL-A-L-----PDKSVDGVISILA 103 (261)
T ss_dssp TTCEEEEETCTTSHHHHHHHT--T-TCEEEEECSCHHHHHSSCCCTTEEEECCCTTSC-C-S-----CTTCBSEEEEESC
T ss_pred CCCEEEEEcCcccHHHHHHHh--C-CCEEEEEeCCHHHHHHHHhccCCEEEECchhhC-C-C-----CCCCEeEEEEcch
Confidence 567999999999999999997 3 68999999 22223899999999764 3 2 2578999998543
Q ss_pred CcCCHHHHhhhCCCCCCcchHHHHHHHHHHhhcCCCeEEEEe
Q 042171 76 KDNYCNYMREQVPDHFRGSSKQAILDLNRSLVDDPCVQLSHV 117 (125)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l 117 (125)
..+. .+ ....++++.+.|+ ...+.....
T Consensus 104 l~~~------------~~-~~~~l~~~~~~Lk-gG~~~~~~~ 131 (261)
T 3ege_A 104 IHHF------------SH-LEKSFQEMQRIIR-DGTIVLLTF 131 (261)
T ss_dssp GGGC------------SS-HHHHHHHHHHHBC-SSCEEEEEE
T ss_pred Hhhc------------cC-HHHHHHHHHHHhC-CcEEEEEEc
Confidence 2211 12 4566777777777 544544443
No 109
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=98.72 E-value=1.1e-08 Score=76.46 Aligned_cols=63 Identities=13% Similarity=0.052 Sum_probs=52.4
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
+..+|||+|||+|..++.+|+..+ . +|+++| .++.++++++.+|+.+.++ .++||
T Consensus 125 ~~~~VLDlgcG~G~~~~~la~~~~-~-~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~--------~~~fD 194 (278)
T 2frn_A 125 PDELVVDMFAGIGHLSLPIAVYGK-A-KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG--------ENIAD 194 (278)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHTC-C-EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC--------CSCEE
T ss_pred CCCEEEEecccCCHHHHHHHHhCC-C-EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc--------cCCcc
Confidence 367999999999999999999854 2 899999 4676779999999987643 37899
Q ss_pred EEEEcCCC
Q 042171 69 YAFMDADK 76 (125)
Q Consensus 69 ~v~id~~~ 76 (125)
+|++|...
T Consensus 195 ~Vi~~~p~ 202 (278)
T 2frn_A 195 RILMGYVV 202 (278)
T ss_dssp EEEECCCS
T ss_pred EEEECCch
Confidence 99997553
No 110
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=98.72 E-value=2.2e-08 Score=72.68 Aligned_cols=64 Identities=17% Similarity=0.225 Sum_probs=52.1
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------C-CCCCcEEEEecchHHHHHHHhhcCCCCCce
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------A-RVDHKINFIESEALSVLDQLLKDSENEVNF 67 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~-~~~~~i~~~~gd~~~~l~~~~~~~~~~~~f 67 (125)
+..+|||+|||+|..++.+++.+++.++++++| . + .++++++.+|+.+. + + +.++|
T Consensus 96 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g-~~~v~~~~~d~~~~-~-~-----~~~~~ 167 (258)
T 2pwy_A 96 PGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQ-VENVRFHLGKLEEA-E-L-----EEAAY 167 (258)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC-CCCEEEEESCGGGC-C-C-----CTTCE
T ss_pred CCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC-CCCEEEEECchhhc-C-C-----CCCCc
Confidence 456999999999999999999865578999999 1 5 46899999999865 1 2 14689
Q ss_pred eEEEEcCC
Q 042171 68 DYAFMDAD 75 (125)
Q Consensus 68 D~v~id~~ 75 (125)
|+|++|..
T Consensus 168 D~v~~~~~ 175 (258)
T 2pwy_A 168 DGVALDLM 175 (258)
T ss_dssp EEEEEESS
T ss_pred CEEEECCc
Confidence 99999754
No 111
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=98.72 E-value=3.3e-08 Score=70.79 Aligned_cols=66 Identities=21% Similarity=0.290 Sum_probs=51.9
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe-------------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEE
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID-------------ARVDHKINFIESEALSVLDQLLKDSENEVNFDYA 70 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD-------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v 70 (125)
+..+|||||||+|..+..+++.. .+|+++| .... +++++.+|+.+.++. .++||+|
T Consensus 70 ~~~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~-~v~~~~~d~~~~~~~-------~~~fD~v 138 (231)
T 1vbf_A 70 KGQKVLEIGTGIGYYTALIAEIV---DKVVSVEINEKMYNYASKLLSYYN-NIKLILGDGTLGYEE-------EKPYDRV 138 (231)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTCS-SEEEEESCGGGCCGG-------GCCEEEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHHc---CEEEEEeCCHHHHHHHHHHHhhcC-CeEEEECCccccccc-------CCCccEE
Confidence 45699999999999999999974 7999999 1222 799999999874332 4689999
Q ss_pred EEcCCCcCCH
Q 042171 71 FMDADKDNYC 80 (125)
Q Consensus 71 ~id~~~~~~~ 80 (125)
+++......+
T Consensus 139 ~~~~~~~~~~ 148 (231)
T 1vbf_A 139 VVWATAPTLL 148 (231)
T ss_dssp EESSBBSSCC
T ss_pred EECCcHHHHH
Confidence 9987655543
No 112
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.72 E-value=5.2e-08 Score=75.95 Aligned_cols=67 Identities=21% Similarity=0.389 Sum_probs=54.7
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
+..+|||+|||+|..++.+|+. + ..+|+++| .++.++++++.+|+.+.++.+... ..+||
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~-g-~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~---~~~fD 291 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIA-G-ADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKK---GEKFD 291 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHT-T-CSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHT---TCCEE
T ss_pred CCCeEEEecCCCCHHHHHHHHC-C-CCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhh---CCCCC
Confidence 5679999999999999999986 3 46999999 456458999999999987765321 46899
Q ss_pred EEEEcCC
Q 042171 69 YAFMDAD 75 (125)
Q Consensus 69 ~v~id~~ 75 (125)
+|++|..
T Consensus 292 ~Vi~dpP 298 (396)
T 2as0_A 292 IVVLDPP 298 (396)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 9999854
No 113
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=98.72 E-value=1.8e-08 Score=75.01 Aligned_cols=70 Identities=13% Similarity=0.096 Sum_probs=55.8
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
+..+|||+|||+|..++.+|+..+ .++|+++| .++ ++++++.+|+.+. +. .++||
T Consensus 119 ~~~~VLDlgcG~G~~s~~la~~~~-~~~V~~vD~s~~av~~a~~n~~~n~l-~~~~~~~~d~~~~-~~-------~~~~D 188 (272)
T 3a27_A 119 ENEVVVDMFAGIGYFTIPLAKYSK-PKLVYAIEKNPTAYHYLCENIKLNKL-NNVIPILADNRDV-EL-------KDVAD 188 (272)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHTC-CSEEEEEECCHHHHHHHHHHHHHTTC-SSEEEEESCGGGC-CC-------TTCEE
T ss_pred CCCEEEEecCcCCHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHcCC-CCEEEEECChHHc-Cc-------cCCce
Confidence 456999999999999999999876 68999999 345 4688999999876 42 36799
Q ss_pred EEEEcCCCcCCHHHHh
Q 042171 69 YAFMDADKDNYCNYMR 84 (125)
Q Consensus 69 ~v~id~~~~~~~~~~~ 84 (125)
+|++|... .+..+++
T Consensus 189 ~Vi~d~p~-~~~~~l~ 203 (272)
T 3a27_A 189 RVIMGYVH-KTHKFLD 203 (272)
T ss_dssp EEEECCCS-SGGGGHH
T ss_pred EEEECCcc-cHHHHHH
Confidence 99998764 4444444
No 114
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.71 E-value=8.9e-09 Score=76.60 Aligned_cols=65 Identities=18% Similarity=0.171 Sum_probs=51.6
Q ss_pred CCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe-C---------------------CCCCcEEEEecchHHHHHHHhhcCC
Q 042171 5 LKKTIEIGVFTGYSLFLTALTIPEDGQITAID-A---------------------RVDHKINFIESEALSVLDQLLKDSE 62 (125)
Q Consensus 5 ~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD-~---------------------~~~~~i~~~~gd~~~~l~~~~~~~~ 62 (125)
..+|||+|||+|..++.+|+. +++|+++| . ++.++++++.+|+.+.++.+...
T Consensus 84 ~~~VLDlgcG~G~~a~~lA~~---g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~-- 158 (258)
T 2r6z_A 84 HPTVWDATAGLGRDSFVLASL---GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKT-- 158 (258)
T ss_dssp CCCEEETTCTTCHHHHHHHHT---TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHH--
T ss_pred cCeEEEeeCccCHHHHHHHHh---CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhcc--
Confidence 468999999999999999995 57999999 1 23356999999999987765310
Q ss_pred CCCceeEEEEcCC
Q 042171 63 NEVNFDYAFMDAD 75 (125)
Q Consensus 63 ~~~~fD~v~id~~ 75 (125)
.++||+|++|..
T Consensus 159 -~~~fD~V~~dP~ 170 (258)
T 2r6z_A 159 -QGKPDIVYLDPM 170 (258)
T ss_dssp -HCCCSEEEECCC
T ss_pred -CCCccEEEECCC
Confidence 167999999853
No 115
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=98.71 E-value=7.1e-09 Score=77.78 Aligned_cols=64 Identities=13% Similarity=0.037 Sum_probs=51.5
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
+..+|||||||+|..++.++.+..++.+|+++| .++.++++++.+|+.+. + + .++||
T Consensus 118 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~-~------~~~fD 189 (305)
T 3ocj_A 118 PGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKL-D-T------REGYD 189 (305)
T ss_dssp TTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGC-C-C------CSCEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcC-C-c------cCCeE
Confidence 467899999999999999974444478999999 45566799999999875 2 2 37899
Q ss_pred EEEEcCC
Q 042171 69 YAFMDAD 75 (125)
Q Consensus 69 ~v~id~~ 75 (125)
+|++...
T Consensus 190 ~v~~~~~ 196 (305)
T 3ocj_A 190 LLTSNGL 196 (305)
T ss_dssp EEECCSS
T ss_pred EEEECCh
Confidence 9998654
No 116
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=98.71 E-value=1.8e-08 Score=72.15 Aligned_cols=60 Identities=18% Similarity=0.246 Sum_probs=48.2
Q ss_pred CCCEEEEEcCc-ccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCce
Q 042171 4 KLKKTIEIGVF-TGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNF 67 (125)
Q Consensus 4 ~~~~vLeiG~g-~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~f 67 (125)
+..+|||+||| +|..++.+++.. +.+|+++| .++ +++++++|+....+ + ..++|
T Consensus 55 ~~~~vLDlG~G~~G~~~~~la~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~-~-----~~~~f 124 (230)
T 3evz_A 55 GGEVALEIGTGHTAMMALMAEKFF--NCKVTATEVDEEFFEYARRNIERNNS--NVRLVKSNGGIIKG-V-----VEGTF 124 (230)
T ss_dssp SSCEEEEECCTTTCHHHHHHHHHH--CCEEEEEECCHHHHHHHHHHHHHTTC--CCEEEECSSCSSTT-T-----CCSCE
T ss_pred CCCEEEEcCCCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHhCC--CcEEEeCCchhhhh-c-----ccCce
Confidence 56799999999 999999999986 58999999 334 79999999753322 2 14789
Q ss_pred eEEEEc
Q 042171 68 DYAFMD 73 (125)
Q Consensus 68 D~v~id 73 (125)
|+|+++
T Consensus 125 D~I~~n 130 (230)
T 3evz_A 125 DVIFSA 130 (230)
T ss_dssp EEEEEC
T ss_pred eEEEEC
Confidence 999987
No 117
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=98.71 E-value=3.6e-08 Score=67.92 Aligned_cols=62 Identities=15% Similarity=0.168 Sum_probs=50.3
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCC-cEEEEecchHHHHHHHhhcCCCCCce
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDH-KINFIESEALSVLDQLLKDSENEVNF 67 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~-~i~~~~gd~~~~l~~~~~~~~~~~~f 67 (125)
+..+|||+|||+|..+..+++. ..+++++| .++.. +++++.+|+.+.++ .++|
T Consensus 52 ~~~~vLdiG~G~G~~~~~~~~~---~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~--------~~~~ 120 (194)
T 1dus_A 52 KDDDILDLGCGYGVIGIALADE---VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVK--------DRKY 120 (194)
T ss_dssp TTCEEEEETCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCT--------TSCE
T ss_pred CCCeEEEeCCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccc--------cCCc
Confidence 4569999999999999999987 58999999 34533 59999999986532 4689
Q ss_pred eEEEEcCCC
Q 042171 68 DYAFMDADK 76 (125)
Q Consensus 68 D~v~id~~~ 76 (125)
|+|+++...
T Consensus 121 D~v~~~~~~ 129 (194)
T 1dus_A 121 NKIITNPPI 129 (194)
T ss_dssp EEEEECCCS
T ss_pred eEEEECCCc
Confidence 999997653
No 118
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=98.71 E-value=2.6e-08 Score=73.91 Aligned_cols=64 Identities=16% Similarity=0.141 Sum_probs=51.0
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe--------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEEEcCC
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID--------ARVDHKINFIESEALSVLDQLLKDSENEVNFDYAFMDAD 75 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD--------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~id~~ 75 (125)
...+|||||||+|..+..|++. ..+|+++| +.-..+++++++++.+. | + ++++||+|++...
T Consensus 39 ~~~~vLDvGcGtG~~~~~l~~~---~~~v~gvD~s~~ml~~a~~~~~v~~~~~~~e~~-~-~-----~~~sfD~v~~~~~ 108 (257)
T 4hg2_A 39 ARGDALDCGCGSGQASLGLAEF---FERVHAVDPGEAQIRQALRHPRVTYAVAPAEDT-G-L-----PPASVDVAIAAQA 108 (257)
T ss_dssp CSSEEEEESCTTTTTHHHHHTT---CSEEEEEESCHHHHHTCCCCTTEEEEECCTTCC-C-C-----CSSCEEEEEECSC
T ss_pred CCCCEEEEcCCCCHHHHHHHHh---CCEEEEEeCcHHhhhhhhhcCCceeehhhhhhh-c-c-----cCCcccEEEEeee
Confidence 3468999999999999999986 47899999 33346899999999765 3 2 2689999999655
Q ss_pred Cc
Q 042171 76 KD 77 (125)
Q Consensus 76 ~~ 77 (125)
.+
T Consensus 109 ~h 110 (257)
T 4hg2_A 109 MH 110 (257)
T ss_dssp CT
T ss_pred hh
Confidence 43
No 119
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=98.71 E-value=1.4e-07 Score=70.36 Aligned_cols=118 Identities=13% Similarity=0.038 Sum_probs=84.9
Q ss_pred CCCEEEEEcCcccHHHHHHHhh------CCCCCEEEEEe------C----------------------------------
Q 042171 4 KLKKTIEIGVFTGYSLFLTALT------IPEDGQITAID------A---------------------------------- 37 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~------~~~~~~v~~iD------~---------------------------------- 37 (125)
-|..|+|+|+..|.+++.++.. ...+.+|+++| .
T Consensus 69 vpG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~ 148 (257)
T 3tos_A 69 VPGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHE 148 (257)
T ss_dssp SCSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHH
T ss_pred CCCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHh
Confidence 4779999999999999998763 12368999999 0
Q ss_pred -----CC-CCcEEEEecchHHHHHHHhhcCCCCCceeEEEEcCCC-cCCHHHHhhhC-----------CCCCCcchHHHH
Q 042171 38 -----RV-DHKINFIESEALSVLDQLLKDSENEVNFDYAFMDADK-DNYCNYMREQV-----------PDHFRGSSKQAI 99 (125)
Q Consensus 38 -----~~-~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~id~~~-~~~~~~~~~~~-----------~~~~~~~~~~~~ 99 (125)
+. .++|+++.|++.+.+|.+..+. +..+|||||+|+++ ..+..+++... .+.... ..+++
T Consensus 149 ~~~~~g~~~~~i~li~G~~~dTL~~~l~~~-~~~~~dlv~ID~D~Y~~t~~~le~~~p~l~~GGvIv~DD~~~~-~w~G~ 226 (257)
T 3tos_A 149 CSDFFGHVTQRSVLVEGDVRETVPRYLAEN-PQTVIALAYFDLDLYEPTKAVLEAIRPYLTKGSIVAFDELDNP-KWPGE 226 (257)
T ss_dssp TTSTTTTSCCSEEEEESCHHHHHHHHHHHC-TTCCEEEEEECCCCHHHHHHHHHHHGGGEEEEEEEEESSTTCT-TCTHH
T ss_pred hhhhcCCCCCcEEEEEecHHHHHHHHHHhC-CCCceEEEEEcCcccchHHHHHHHHHHHhCCCcEEEEcCCCCC-CChHH
Confidence 01 2679999999999999864321 24579999999986 23344566321 122111 33478
Q ss_pred HHHHHHhhcCCCeEEEEeecCCcc
Q 042171 100 LDLNRSLVDDPCVQLSHVALGESV 123 (125)
Q Consensus 100 ~~~~~~l~~~~~~~~~~lp~~~G~ 123 (125)
++.++......+.+...+|+..+.
T Consensus 227 ~~A~~ef~~~~~~~i~~~p~~~~~ 250 (257)
T 3tos_A 227 NIAMRKVLGLDHAPLRLLPGRPAP 250 (257)
T ss_dssp HHHHHHHTCTTSSCCEECTTCSCC
T ss_pred HHHHHHHHhhCCCeEEEccCCCCC
Confidence 888888888889999999987654
No 120
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.71 E-value=1.7e-08 Score=79.85 Aligned_cols=61 Identities=15% Similarity=0.175 Sum_probs=51.5
Q ss_pred CCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------C--CCCCcEEEEecchHHHHHHHhhcCCCCCce
Q 042171 5 LKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------A--RVDHKINFIESEALSVLDQLLKDSENEVNF 67 (125)
Q Consensus 5 ~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~--~~~~~i~~~~gd~~~~l~~~~~~~~~~~~f 67 (125)
..+|||+|||+|..++++++. .++|+++| . ++ ++++++++|+.+.++.+. ..+|
T Consensus 94 g~~VLDLgcG~G~~al~LA~~---g~~V~~VD~s~~~l~~Ar~N~~~~~~gl-~~i~~i~~Da~~~L~~~~-----~~~f 164 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSK---ASQGIYIERNDETAVAARHNIPLLLNEG-KDVNILTGDFKEYLPLIK-----TFHP 164 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTT---CSEEEEEESCHHHHHHHHHHHHHHSCTT-CEEEEEESCGGGSHHHHH-----HHCC
T ss_pred CCEEEEeCCCchHHHHHHHhc---CCEEEEEECCHHHHHHHHHhHHHhccCC-CcEEEEECcHHHhhhhcc-----CCCc
Confidence 579999999999999999986 57999999 2 66 789999999998766532 2579
Q ss_pred eEEEEcC
Q 042171 68 DYAFMDA 74 (125)
Q Consensus 68 D~v~id~ 74 (125)
|+||+|-
T Consensus 165 DvV~lDP 171 (410)
T 3ll7_A 165 DYIYVDP 171 (410)
T ss_dssp SEEEECC
T ss_pred eEEEECC
Confidence 9999984
No 121
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=98.70 E-value=2.5e-08 Score=76.72 Aligned_cols=62 Identities=21% Similarity=0.314 Sum_probs=51.6
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe--------------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeE
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID--------------ARVDHKINFIESEALSVLDQLLKDSENEVNFDY 69 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD--------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~ 69 (125)
+..+|||||||+|..++.++++ + ..+|+++| .++.++++++.+|+.+. + + +.++||+
T Consensus 66 ~~~~VLDvGcG~G~~~~~la~~-g-~~~v~gvD~s~~l~~a~~~~~~~~~~~~v~~~~~d~~~~-~-~-----~~~~fD~ 136 (349)
T 3q7e_A 66 KDKVVLDVGSGTGILCMFAAKA-G-ARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEV-E-L-----PVEKVDI 136 (349)
T ss_dssp TTCEEEEESCTTSHHHHHHHHT-T-CSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTC-C-C-----SSSCEEE
T ss_pred CCCEEEEEeccchHHHHHHHHC-C-CCEEEEECcHHHHHHHHHHHHHcCCCCcEEEEECcHHHc-c-C-----CCCceEE
Confidence 4579999999999999999997 4 57999999 46667899999999876 2 2 2478999
Q ss_pred EEEcC
Q 042171 70 AFMDA 74 (125)
Q Consensus 70 v~id~ 74 (125)
|+++.
T Consensus 137 Iis~~ 141 (349)
T 3q7e_A 137 IISEW 141 (349)
T ss_dssp EEECC
T ss_pred EEEcc
Confidence 99864
No 122
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.70 E-value=8.1e-09 Score=74.23 Aligned_cols=69 Identities=13% Similarity=0.162 Sum_probs=53.4
Q ss_pred CCEEEEEcCcccHHHHHHHhhCCC-----CCEEEEEe---------------CCC----CCcEEEEecchHHHHHHHhhc
Q 042171 5 LKKTIEIGVFTGYSLFLTALTIPE-----DGQITAID---------------ARV----DHKINFIESEALSVLDQLLKD 60 (125)
Q Consensus 5 ~~~vLeiG~g~G~~t~~la~~~~~-----~~~v~~iD---------------~~~----~~~i~~~~gd~~~~l~~~~~~ 60 (125)
..+|||||||+|+.+..+++..+. .++|+++| .+. ..+++++.+|+.+.++.
T Consensus 85 ~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~---- 160 (227)
T 1r18_A 85 GARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPP---- 160 (227)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCGG----
T ss_pred CCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCCCc----
Confidence 469999999999999999997652 36999999 110 35799999999874332
Q ss_pred CCCCCceeEEEEcCCCcCCH
Q 042171 61 SENEVNFDYAFMDADKDNYC 80 (125)
Q Consensus 61 ~~~~~~fD~v~id~~~~~~~ 80 (125)
.++||+|+++......+
T Consensus 161 ---~~~fD~I~~~~~~~~~~ 177 (227)
T 1r18_A 161 ---NAPYNAIHVGAAAPDTP 177 (227)
T ss_dssp ---GCSEEEEEECSCBSSCC
T ss_pred ---CCCccEEEECCchHHHH
Confidence 36899999988765554
No 123
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=98.69 E-value=3.4e-08 Score=72.27 Aligned_cols=66 Identities=17% Similarity=0.305 Sum_probs=53.2
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
+..+|||||||+|..+..+++.. +.+|+++| .++.++++++.+|+.+. | + +.++||
T Consensus 61 ~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~-~-----~~~~fD 131 (273)
T 3bus_A 61 SGDRVLDVGCGIGKPAVRLATAR--DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDL-P-F-----EDASFD 131 (273)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHS--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC-C-S-----CTTCEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccC-C-C-----CCCCcc
Confidence 45699999999999999999976 58999999 36667899999999764 3 2 247899
Q ss_pred EEEEcCCCcC
Q 042171 69 YAFMDADKDN 78 (125)
Q Consensus 69 ~v~id~~~~~ 78 (125)
+|++......
T Consensus 132 ~v~~~~~l~~ 141 (273)
T 3bus_A 132 AVWALESLHH 141 (273)
T ss_dssp EEEEESCTTT
T ss_pred EEEEechhhh
Confidence 9998765433
No 124
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=98.68 E-value=3.1e-08 Score=72.75 Aligned_cols=64 Identities=25% Similarity=0.393 Sum_probs=52.4
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
+..+|||||||+|..+..+++..| +.+++++| .++ ++++++.+|+.+. + + +.++||
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~~d~~~~-~-~-----~~~~fD 107 (276)
T 3mgg_A 37 PGAKVLEAGCGIGAQTVILAKNNP-DAEITSIDISPESLEKARENTEKNGI-KNVKFLQANIFSL-P-F-----EDSSFD 107 (276)
T ss_dssp TTCEEEETTCTTSHHHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHTTC-CSEEEEECCGGGC-C-S-----CTTCEE
T ss_pred CCCeEEEecCCCCHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCC-CCcEEEEcccccC-C-C-----CCCCee
Confidence 456999999999999999999976 78999999 234 4799999999864 2 2 257899
Q ss_pred EEEEcCCC
Q 042171 69 YAFMDADK 76 (125)
Q Consensus 69 ~v~id~~~ 76 (125)
+|++....
T Consensus 108 ~v~~~~~l 115 (276)
T 3mgg_A 108 HIFVCFVL 115 (276)
T ss_dssp EEEEESCG
T ss_pred EEEEechh
Confidence 99987654
No 125
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=98.68 E-value=4.1e-08 Score=72.56 Aligned_cols=63 Identities=8% Similarity=-0.010 Sum_probs=49.4
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe------------CCC-------------------CCcEEEEecchHH
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID------------ARV-------------------DHKINFIESEALS 52 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD------------~~~-------------------~~~i~~~~gd~~~ 52 (125)
+..+|||+|||+|..+.+||+. +.+|++|| .+. ..+|+++++|+.+
T Consensus 68 ~~~~vLD~GCG~G~~~~~La~~---G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~ 144 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKWFADR---GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFD 144 (252)
T ss_dssp CSCEEEETTCTTCTHHHHHHHT---TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTT
T ss_pred CCCeEEEeCCCCcHHHHHHHHC---CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcccc
Confidence 5679999999999999999986 57999999 221 2579999999987
Q ss_pred HHHHHhhcCCCCCceeEEEEcCC
Q 042171 53 VLDQLLKDSENEVNFDYAFMDAD 75 (125)
Q Consensus 53 ~l~~~~~~~~~~~~fD~v~id~~ 75 (125)
..+. ..++||+|+.-+.
T Consensus 145 l~~~------~~~~FD~V~~~~~ 161 (252)
T 2gb4_A 145 LPRA------NIGKFDRIWDRGA 161 (252)
T ss_dssp GGGG------CCCCEEEEEESSS
T ss_pred CCcc------cCCCEEEEEEhhh
Confidence 5321 1278999997544
No 126
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.68 E-value=8.8e-08 Score=74.85 Aligned_cols=72 Identities=15% Similarity=0.133 Sum_probs=56.9
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------C---------------CCCCcEEEEecchHHH
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------A---------------RVDHKINFIESEALSV 53 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~---------------~~~~~i~~~~gd~~~~ 53 (125)
+..+|||+|||+|..++.+|+..+ ..+|+++| . ++. +++++++|+.+.
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~-~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~-~i~v~~~Da~~~ 124 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETP-AEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEK-TIVINHDDANRL 124 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSS-CSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSS-EEEEEESCHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCC-ceEEEcCcHHHH
Confidence 457899999999999999999987 57899999 3 553 499999999988
Q ss_pred HHHHhhcCCCCCceeEEEEcCCCcCCHHHHh
Q 042171 54 LDQLLKDSENEVNFDYAFMDADKDNYCNYMR 84 (125)
Q Consensus 54 l~~~~~~~~~~~~fD~v~id~~~~~~~~~~~ 84 (125)
+... ..+||+|++|.- ....++++
T Consensus 125 ~~~~------~~~fD~I~lDP~-~~~~~~l~ 148 (378)
T 2dul_A 125 MAER------HRYFHFIDLDPF-GSPMEFLD 148 (378)
T ss_dssp HHHS------TTCEEEEEECCS-SCCHHHHH
T ss_pred HHhc------cCCCCEEEeCCC-CCHHHHHH
Confidence 6643 357999999863 23345555
No 127
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=98.67 E-value=3.5e-08 Score=71.97 Aligned_cols=65 Identities=17% Similarity=0.251 Sum_probs=52.6
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------C--------CCCCcEEEEecchHHHHHHHhhc
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------A--------RVDHKINFIESEALSVLDQLLKD 60 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~--------~~~~~i~~~~gd~~~~l~~~~~~ 60 (125)
+..+|||||||+|..++.+++..+ +.+++++| . ++ .+++++.+|+.+.++...
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~-~nv~~~~~D~~~~l~~~~-- 124 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFP-EDLILGMEIRVQVTNYVEDRIIALRNNTASKHGF-QNINVLRGNAMKFLPNFF-- 124 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHST-TSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTT-TTEEEEECCTTSCGGGTS--
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCC-CCCEEEEEcCHHHHHHHHHHHHHHhhccccccCC-CcEEEEeccHHHHHHHhc--
Confidence 456899999999999999999987 68999999 1 55 589999999987655421
Q ss_pred CCCCCceeEEEEcC
Q 042171 61 SENEVNFDYAFMDA 74 (125)
Q Consensus 61 ~~~~~~fD~v~id~ 74 (125)
+.+++|.|++..
T Consensus 125 --~~~~~d~v~~~~ 136 (246)
T 2vdv_E 125 --EKGQLSKMFFCF 136 (246)
T ss_dssp --CTTCEEEEEEES
T ss_pred --cccccCEEEEEC
Confidence 257899998754
No 128
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=98.67 E-value=3e-08 Score=69.89 Aligned_cols=69 Identities=13% Similarity=0.146 Sum_probs=52.4
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
+..+|||+|||+|..++.+++. + ..+++++| .++. +++++.+|+.+.. .++||
T Consensus 60 ~~~~vLDiG~G~G~~~~~l~~~-~-~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~---------~~~fD 127 (205)
T 3grz_A 60 KPLTVADVGTGSGILAIAAHKL-G-AKSVLATDISDESMTAAEENAALNGIY-DIALQKTSLLADV---------DGKFD 127 (205)
T ss_dssp SCCEEEEETCTTSHHHHHHHHT-T-CSEEEEEESCHHHHHHHHHHHHHTTCC-CCEEEESSTTTTC---------CSCEE
T ss_pred CCCEEEEECCCCCHHHHHHHHC-C-CCEEEEEECCHHHHHHHHHHHHHcCCC-ceEEEeccccccC---------CCCce
Confidence 4579999999999999998874 4 57999999 3443 3999999987541 47899
Q ss_pred EEEEcCCCcCCHHHHh
Q 042171 69 YAFMDADKDNYCNYMR 84 (125)
Q Consensus 69 ~v~id~~~~~~~~~~~ 84 (125)
+|+++.....+..+++
T Consensus 128 ~i~~~~~~~~~~~~l~ 143 (205)
T 3grz_A 128 LIVANILAEILLDLIP 143 (205)
T ss_dssp EEEEESCHHHHHHHGG
T ss_pred EEEECCcHHHHHHHHH
Confidence 9999765443344444
No 129
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.67 E-value=5.8e-08 Score=69.95 Aligned_cols=58 Identities=14% Similarity=0.078 Sum_probs=46.7
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
.+.+|||+|||+|..++.++...| ..+++++| .|...++++ .|..+..+ .++||
T Consensus 49 ~~~~VLDlGCG~GplAl~l~~~~p-~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~~~--------~~~~D 117 (200)
T 3fzg_A 49 HVSSILDFGCGFNPLALYQWNENE-KIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESDVY--------KGTYD 117 (200)
T ss_dssp CCSEEEEETCTTHHHHHHHHCSSC-CCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHHHT--------TSEEE
T ss_pred CCCeEEEecCCCCHHHHHHHhcCC-CCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--ecccccCC--------CCCcC
Confidence 578999999999999999999887 67999999 466557777 45544422 57899
Q ss_pred EEEE
Q 042171 69 YAFM 72 (125)
Q Consensus 69 ~v~i 72 (125)
+|++
T Consensus 118 vVLa 121 (200)
T 3fzg_A 118 VVFL 121 (200)
T ss_dssp EEEE
T ss_pred hhhH
Confidence 9996
No 130
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.67 E-value=7.6e-08 Score=67.79 Aligned_cols=58 Identities=14% Similarity=0.186 Sum_probs=47.4
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
+..+|||+|||+|..++.+++. + ..+|+++| .++ +++++.+|+.+. ..+||
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~~~-~-~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~----------~~~~D 114 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGALLL-G-AKEVICVEVDKEAVDVLIENLGEFKG--KFKVFIGDVSEF----------NSRVD 114 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT-T-CSEEEEEESCHHHHHHHHHHTGGGTT--SEEEEESCGGGC----------CCCCS
T ss_pred CcCEEEEeeCCCCHHHHHHHHc-C-CCEEEEEECCHHHHHHHHHHHHHcCC--CEEEEECchHHc----------CCCCC
Confidence 4579999999999999999986 3 35899999 122 799999999763 24799
Q ss_pred EEEEcCC
Q 042171 69 YAFMDAD 75 (125)
Q Consensus 69 ~v~id~~ 75 (125)
+|++|..
T Consensus 115 ~v~~~~p 121 (207)
T 1wy7_A 115 IVIMNPP 121 (207)
T ss_dssp EEEECCC
T ss_pred EEEEcCC
Confidence 9999864
No 131
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.67 E-value=1e-07 Score=74.34 Aligned_cols=67 Identities=18% Similarity=0.263 Sum_probs=54.2
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCC-CCcEEEEecchHHHHHHHhhcCCCCCce
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARV-DHKINFIESEALSVLDQLLKDSENEVNF 67 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~-~~~i~~~~gd~~~~l~~~~~~~~~~~~f 67 (125)
+..+|||+|||+|..++.+|+.- ..+|+++| .++ .++++++.+|+.+.++.+... ..+|
T Consensus 220 ~~~~VLDl~cG~G~~sl~la~~g--~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~---~~~f 294 (396)
T 3c0k_A 220 ENKRVLNCFSYTGGFAVSALMGG--CSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDR---GEKF 294 (396)
T ss_dssp TTCEEEEESCTTCSHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHT---TCCE
T ss_pred CCCeEEEeeccCCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhc---CCCC
Confidence 46799999999999999999852 46899999 456 558999999999987765321 3689
Q ss_pred eEEEEcCC
Q 042171 68 DYAFMDAD 75 (125)
Q Consensus 68 D~v~id~~ 75 (125)
|+|++|..
T Consensus 295 D~Ii~dpP 302 (396)
T 3c0k_A 295 DVIVMDPP 302 (396)
T ss_dssp EEEEECCS
T ss_pred CEEEECCC
Confidence 99999853
No 132
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=98.66 E-value=2.9e-08 Score=77.39 Aligned_cols=62 Identities=15% Similarity=0.249 Sum_probs=50.6
Q ss_pred CCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCC--cEEEEecchHHHHHHHhhcCCCCCce
Q 042171 5 LKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDH--KINFIESEALSVLDQLLKDSENEVNF 67 (125)
Q Consensus 5 ~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~--~i~~~~gd~~~~l~~~~~~~~~~~~f 67 (125)
..+|||+|||+|..++.+++..| +.+|+++| .++.+ +++++.+|+.+.++ .++|
T Consensus 223 ~~~VLDlGcG~G~~s~~la~~~p-~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~~--------~~~f 293 (375)
T 4dcm_A 223 EGEIVDLGCGNGVIGLTLLDKNP-QAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVE--------PFRF 293 (375)
T ss_dssp CSEEEEETCTTCHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTCC--------TTCE
T ss_pred CCeEEEEeCcchHHHHHHHHHCC-CCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccCC--------CCCe
Confidence 37999999999999999999987 78999999 23332 58899999987432 4689
Q ss_pred eEEEEcCC
Q 042171 68 DYAFMDAD 75 (125)
Q Consensus 68 D~v~id~~ 75 (125)
|+|+++..
T Consensus 294 D~Ii~npp 301 (375)
T 4dcm_A 294 NAVLCNPP 301 (375)
T ss_dssp EEEEECCC
T ss_pred eEEEECCC
Confidence 99998644
No 133
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.66 E-value=4.1e-08 Score=76.83 Aligned_cols=60 Identities=15% Similarity=0.280 Sum_probs=49.9
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe--------------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeE
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID--------------ARVDHKINFIESEALSVLDQLLKDSENEVNFDY 69 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD--------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~ 69 (125)
+.+.|||||||+|..++.+|++ + ..+|++|| .++.++|+++++++.+. .+ .++||+
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~a-G-A~~V~ave~s~~~~~a~~~~~~n~~~~~i~~i~~~~~~~--~l------pe~~Dv 152 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQA-G-ARRVYAVEASAIWQQAREVVRFNGLEDRVHVLPGPVETV--EL------PEQVDA 152 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-T-CSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTTC--CC------SSCEEE
T ss_pred CCCEEEEeCCCccHHHHHHHHh-C-CCEEEEEeChHHHHHHHHHHHHcCCCceEEEEeeeeeee--cC------CccccE
Confidence 5678999999999999988876 2 35899999 57889999999999876 22 468999
Q ss_pred EEEc
Q 042171 70 AFMD 73 (125)
Q Consensus 70 v~id 73 (125)
|++.
T Consensus 153 ivsE 156 (376)
T 4hc4_A 153 IVSE 156 (376)
T ss_dssp EECC
T ss_pred EEee
Confidence 9974
No 134
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=98.66 E-value=1.7e-08 Score=71.61 Aligned_cols=67 Identities=21% Similarity=0.367 Sum_probs=53.4
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
+..+|||+|||+|..+..+++..++..+++++| .++ ++++++.+|+.+. + + ..++||
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~~d~~~~-~-~-----~~~~fD 108 (219)
T 3dh0_A 37 EGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGL-KNVEVLKSEENKI-P-L-----PDNTVD 108 (219)
T ss_dssp TTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTC-TTEEEEECBTTBC-S-S-----CSSCEE
T ss_pred CCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEecccccC-C-C-----CCCCee
Confidence 456999999999999999999975578999999 234 3799999999764 2 2 257899
Q ss_pred EEEEcCCCcC
Q 042171 69 YAFMDADKDN 78 (125)
Q Consensus 69 ~v~id~~~~~ 78 (125)
+|++......
T Consensus 109 ~v~~~~~l~~ 118 (219)
T 3dh0_A 109 FIFMAFTFHE 118 (219)
T ss_dssp EEEEESCGGG
T ss_pred EEEeehhhhh
Confidence 9999766443
No 135
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=98.65 E-value=3.4e-08 Score=73.22 Aligned_cols=63 Identities=14% Similarity=0.230 Sum_probs=50.9
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------C-CCCCcEEEEecchHHHHHHHhhcCCCCCce
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------A-RVDHKINFIESEALSVLDQLLKDSENEVNF 67 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~-~~~~~i~~~~gd~~~~l~~~~~~~~~~~~f 67 (125)
+..+|||+|||+|..++.+++.+.++++|+++| . +. ++++++.+|+.+.++ .++|
T Consensus 110 ~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~-~~v~~~~~d~~~~~~--------~~~f 180 (275)
T 1yb2_A 110 PGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDI-GNVRTSRSDIADFIS--------DQMY 180 (275)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCC-TTEEEECSCTTTCCC--------SCCE
T ss_pred CcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCC-CcEEEEECchhccCc--------CCCc
Confidence 346999999999999999999854478999999 2 42 689999999986322 4689
Q ss_pred eEEEEcCC
Q 042171 68 DYAFMDAD 75 (125)
Q Consensus 68 D~v~id~~ 75 (125)
|+|+++..
T Consensus 181 D~Vi~~~~ 188 (275)
T 1yb2_A 181 DAVIADIP 188 (275)
T ss_dssp EEEEECCS
T ss_pred cEEEEcCc
Confidence 99999654
No 136
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=98.65 E-value=6.6e-08 Score=75.13 Aligned_cols=61 Identities=18% Similarity=0.280 Sum_probs=50.6
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe--------------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeE
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID--------------ARVDHKINFIESEALSVLDQLLKDSENEVNFDY 69 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD--------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~ 69 (125)
+..+|||||||+|..++.++++ + ..+|+++| .++.++++++++|+.+.. + .++||+
T Consensus 63 ~~~~VLDlGcGtG~ls~~la~~-g-~~~V~gvD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~------~~~~D~ 132 (376)
T 3r0q_C 63 EGKTVLDVGTGSGILAIWSAQA-G-ARKVYAVEATKMADHARALVKANNLDHIVEVIEGSVEDIS--L------PEKVDV 132 (376)
T ss_dssp TTCEEEEESCTTTHHHHHHHHT-T-CSEEEEEESSTTHHHHHHHHHHTTCTTTEEEEESCGGGCC--C------SSCEEE
T ss_pred CCCEEEEeccCcCHHHHHHHhc-C-CCEEEEEccHHHHHHHHHHHHHcCCCCeEEEEECchhhcC--c------CCcceE
Confidence 5679999999999999999987 3 35999999 456678999999998652 2 378999
Q ss_pred EEEcC
Q 042171 70 AFMDA 74 (125)
Q Consensus 70 v~id~ 74 (125)
|+++.
T Consensus 133 Iv~~~ 137 (376)
T 3r0q_C 133 IISEW 137 (376)
T ss_dssp EEECC
T ss_pred EEEcC
Confidence 99965
No 137
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=98.65 E-value=5e-08 Score=68.75 Aligned_cols=63 Identities=16% Similarity=0.194 Sum_probs=50.9
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe-----------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEEE
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID-----------ARVDHKINFIESEALSVLDQLLKDSENEVNFDYAFM 72 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD-----------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~i 72 (125)
+..+|||||||+|..+..+++. +.+++++| .+. .+++++.+|+.+.. ..++||+|++
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~s~~~~~~a~~~~~-~~~~~~~~d~~~~~--------~~~~~D~v~~ 113 (218)
T 3ou2_A 46 IRGDVLELASGTGYWTRHLSGL---ADRVTALDGSAEMIAEAGRHGL-DNVEFRQQDLFDWT--------PDRQWDAVFF 113 (218)
T ss_dssp SCSEEEEESCTTSHHHHHHHHH---SSEEEEEESCHHHHHHHGGGCC-TTEEEEECCTTSCC--------CSSCEEEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHhcCC-CCeEEEecccccCC--------CCCceeEEEE
Confidence 3469999999999999999998 57999999 222 67999999998661 1578999999
Q ss_pred cCCCcC
Q 042171 73 DADKDN 78 (125)
Q Consensus 73 d~~~~~ 78 (125)
......
T Consensus 114 ~~~l~~ 119 (218)
T 3ou2_A 114 AHWLAH 119 (218)
T ss_dssp ESCGGG
T ss_pred echhhc
Confidence 765443
No 138
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=98.64 E-value=1.5e-08 Score=72.86 Aligned_cols=62 Identities=15% Similarity=0.163 Sum_probs=49.3
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
++.+|||||||+|..+..+++. +.+|+++| .+...+++++.+|+.+..+ ..+||
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--------~~~fD 134 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMASP---ERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRP--------TELFD 134 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCBT---TEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCC--------SSCEE
T ss_pred CCCCEEEeCCCCCHHHHHHHhC---CCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCC--------CCCee
Confidence 4569999999999999999762 68999999 1244679999999987521 46899
Q ss_pred EEEEcCCC
Q 042171 69 YAFMDADK 76 (125)
Q Consensus 69 ~v~id~~~ 76 (125)
+|++....
T Consensus 135 ~v~~~~~l 142 (235)
T 3lcc_A 135 LIFDYVFF 142 (235)
T ss_dssp EEEEESST
T ss_pred EEEEChhh
Confidence 99986554
No 139
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.64 E-value=1.7e-07 Score=73.05 Aligned_cols=68 Identities=21% Similarity=0.257 Sum_probs=54.2
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe------------CC------CC----CcEEEEecchHHHHHHHhhcC
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID------------AR------VD----HKINFIESEALSVLDQLLKDS 61 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD------------~~------~~----~~i~~~~gd~~~~l~~~~~~~ 61 (125)
+|++||+||||+|..+..+++.- ..+|++|| .+ +. ++++++.+|+.+.+..+...
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~--~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~- 264 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLK--PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKE- 264 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTC--CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHH-
T ss_pred CCCEEEEEECChhHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhcc-
Confidence 57899999999999999998864 38999999 11 22 27999999999998764211
Q ss_pred CCCCceeEEEEcCCC
Q 042171 62 ENEVNFDYAFMDADK 76 (125)
Q Consensus 62 ~~~~~fD~v~id~~~ 76 (125)
.++||+|++|...
T Consensus 265 --~~~fDvII~D~~d 277 (364)
T 2qfm_A 265 --GREFDYVINDLTA 277 (364)
T ss_dssp --TCCEEEEEEECCS
T ss_pred --CCCceEEEECCCC
Confidence 4789999999754
No 140
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=98.64 E-value=3.7e-08 Score=74.06 Aligned_cols=63 Identities=10% Similarity=0.192 Sum_probs=51.7
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
+..+|||||||+|..++.+++.. +.+|+++| .++.++++++.+|+.+. + + ..++||
T Consensus 117 ~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~-~-----~~~~fD 187 (312)
T 3vc1_A 117 PDDTLVDAGCGRGGSMVMAHRRF--GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDT-P-F-----DKGAVT 187 (312)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC-C-C-----CTTCEE
T ss_pred CCCEEEEecCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcC-C-C-----CCCCEe
Confidence 35699999999999999999976 47999999 45667899999999764 3 2 247899
Q ss_pred EEEEcCC
Q 042171 69 YAFMDAD 75 (125)
Q Consensus 69 ~v~id~~ 75 (125)
+|++...
T Consensus 188 ~V~~~~~ 194 (312)
T 3vc1_A 188 ASWNNES 194 (312)
T ss_dssp EEEEESC
T ss_pred EEEECCc
Confidence 9998644
No 141
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.64 E-value=1.3e-07 Score=79.15 Aligned_cols=64 Identities=22% Similarity=0.337 Sum_probs=53.4
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCC-CcEEEEecchHHHHHHHhhcCCCCCce
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVD-HKINFIESEALSVLDQLLKDSENEVNF 67 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~-~~i~~~~gd~~~~l~~~~~~~~~~~~f 67 (125)
+.++|||+|||+|..++.+++. + ..+|+++| .++. ++++++++|+.+.++.. .++|
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~-g-a~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~------~~~f 610 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLG-G-ARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREA------NEQF 610 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHT-T-CSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHC------CCCE
T ss_pred CCCcEEEeeechhHHHHHHHHC-C-CCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhc------CCCc
Confidence 4679999999999999999984 2 35799999 5665 58999999999987753 4789
Q ss_pred eEEEEcCC
Q 042171 68 DYAFMDAD 75 (125)
Q Consensus 68 D~v~id~~ 75 (125)
|+|++|..
T Consensus 611 D~Ii~DPP 618 (703)
T 3v97_A 611 DLIFIDPP 618 (703)
T ss_dssp EEEEECCC
T ss_pred cEEEECCc
Confidence 99999864
No 142
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.64 E-value=8.8e-08 Score=67.33 Aligned_cols=59 Identities=19% Similarity=0.245 Sum_probs=47.8
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe----------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEEEc
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID----------ARVDHKINFIESEALSVLDQLLKDSENEVNFDYAFMD 73 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD----------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~id 73 (125)
+..+|||+|||+|..++.+++. + ..+|+++| .... +++++++|+.+. .++||+|+++
T Consensus 51 ~~~~vlD~gcG~G~~~~~l~~~-~-~~~v~~vD~~~~~~~~a~~~~~-~~~~~~~d~~~~----------~~~~D~v~~~ 117 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACGSYLL-G-AESVTAFDIDPDAIETAKRNCG-GVNFMVADVSEI----------SGKYDTWIMN 117 (200)
T ss_dssp BTSEEEEETCTTCHHHHHHHHT-T-BSEEEEEESCHHHHHHHHHHCT-TSEEEECCGGGC----------CCCEEEEEEC
T ss_pred CCCEEEEEeCCccHHHHHHHHc-C-CCEEEEEECCHHHHHHHHHhcC-CCEEEECcHHHC----------CCCeeEEEEC
Confidence 5679999999999999999987 3 46899999 1122 799999999863 2579999998
Q ss_pred CC
Q 042171 74 AD 75 (125)
Q Consensus 74 ~~ 75 (125)
..
T Consensus 118 ~p 119 (200)
T 1ne2_A 118 PP 119 (200)
T ss_dssp CC
T ss_pred CC
Confidence 65
No 143
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.64 E-value=9e-08 Score=75.26 Aligned_cols=73 Identities=16% Similarity=0.099 Sum_probs=58.0
Q ss_pred CCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCc-EEEEecchHHHHH-HHhhcCCCCCce
Q 042171 5 LKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHK-INFIESEALSVLD-QLLKDSENEVNF 67 (125)
Q Consensus 5 ~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~-i~~~~gd~~~~l~-~~~~~~~~~~~f 67 (125)
..+|||++||+|..++.+|+..+..++|+++| .++.++ ++++.+|+.+.+. .+ ..+|
T Consensus 53 g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~------~~~f 126 (392)
T 3axs_A 53 PVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEW------GFGF 126 (392)
T ss_dssp CEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCC------SSCE
T ss_pred CCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhh------CCCC
Confidence 46899999999999999999875236899999 577666 9999999998876 54 3679
Q ss_pred eEEEEcCCCcCCHHHHh
Q 042171 68 DYAFMDADKDNYCNYMR 84 (125)
Q Consensus 68 D~v~id~~~~~~~~~~~ 84 (125)
|+|++|. .....++++
T Consensus 127 D~V~lDP-~g~~~~~l~ 142 (392)
T 3axs_A 127 DYVDLDP-FGTPVPFIE 142 (392)
T ss_dssp EEEEECC-SSCCHHHHH
T ss_pred cEEEECC-CcCHHHHHH
Confidence 9999998 333344554
No 144
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.64 E-value=5.6e-08 Score=74.05 Aligned_cols=67 Identities=21% Similarity=0.192 Sum_probs=52.8
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
...+|||+|||+|..|+.||+.+++.++|+++| .++ .+++++.+|+.+..+... ...+||
T Consensus 102 ~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~-~~v~~~~~D~~~~~~~~~----~~~~fD 176 (309)
T 2b9e_A 102 PGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGV-SCCELAEEDFLAVSPSDP----RYHEVH 176 (309)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTC-CSEEEEECCGGGSCTTCG----GGTTEE
T ss_pred CCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC-CeEEEEeCChHhcCcccc----ccCCCC
Confidence 346999999999999999999886579999999 455 579999999987533210 015799
Q ss_pred EEEEcCC
Q 042171 69 YAFMDAD 75 (125)
Q Consensus 69 ~v~id~~ 75 (125)
.|++|+.
T Consensus 177 ~Vl~D~P 183 (309)
T 2b9e_A 177 YILLDPS 183 (309)
T ss_dssp EEEECCC
T ss_pred EEEEcCC
Confidence 9999854
No 145
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=98.63 E-value=1.7e-08 Score=72.63 Aligned_cols=64 Identities=13% Similarity=0.048 Sum_probs=50.3
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------CCCCCcEEEEecchHHHHHHHhhcCCC-CCceeEEEEc
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------ARVDHKINFIESEALSVLDQLLKDSEN-EVNFDYAFMD 73 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------~~~~~~i~~~~gd~~~~l~~~~~~~~~-~~~fD~v~id 73 (125)
+..+|||||||+|..+..+++. +.+|+++| .....+++++.+|+.+.+|. . .++||+|++.
T Consensus 48 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~------~~~~~fD~v~~~ 118 (226)
T 3m33_A 48 PQTRVLEAGCGHGPDAARFGPQ---AARWAAYDFSPELLKLARANAPHADVYEWNGKGELPA------GLGAPFGLIVSR 118 (226)
T ss_dssp TTCEEEEESCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCT------TCCCCEEEEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHhCCCceEEEcchhhccCC------cCCCCEEEEEeC
Confidence 4679999999999999999987 57999999 11135799999999655442 2 4789999997
Q ss_pred CCC
Q 042171 74 ADK 76 (125)
Q Consensus 74 ~~~ 76 (125)
...
T Consensus 119 ~~~ 121 (226)
T 3m33_A 119 RGP 121 (226)
T ss_dssp SCC
T ss_pred CCH
Confidence 443
No 146
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=98.63 E-value=5.7e-08 Score=74.11 Aligned_cols=62 Identities=19% Similarity=0.230 Sum_probs=50.6
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe--------------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeE
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID--------------ARVDHKINFIESEALSVLDQLLKDSENEVNFDY 69 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD--------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~ 69 (125)
+..+|||||||+|..++.++++ + ..+|+++| .++.++|+++.+|+.+. + + +.++||+
T Consensus 38 ~~~~VLDiGcGtG~ls~~la~~-g-~~~v~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~-~-----~~~~~D~ 108 (328)
T 1g6q_1 38 KDKIVLDVGCGTGILSMFAAKH-G-AKHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDV-H-L-----PFPKVDI 108 (328)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-C-CSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTS-C-C-----SSSCEEE
T ss_pred CCCEEEEecCccHHHHHHHHHC-C-CCEEEEEChHHHHHHHHHHHHHcCCCCCEEEEECchhhc-c-C-----CCCcccE
Confidence 4679999999999999999986 3 46999999 46667899999999865 2 2 1478999
Q ss_pred EEEcC
Q 042171 70 AFMDA 74 (125)
Q Consensus 70 v~id~ 74 (125)
|+++.
T Consensus 109 Ivs~~ 113 (328)
T 1g6q_1 109 IISEW 113 (328)
T ss_dssp EEECC
T ss_pred EEEeC
Confidence 99863
No 147
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=98.63 E-value=4.1e-08 Score=72.32 Aligned_cols=65 Identities=15% Similarity=0.179 Sum_probs=52.4
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------C-C-CCCcEEEEecchHHHHHHHhhcCCCCCc
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------A-R-VDHKINFIESEALSVLDQLLKDSENEVN 66 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~-~-~~~~i~~~~gd~~~~l~~~~~~~~~~~~ 66 (125)
+..+|||+|||+|..++.+++.+.+.++++++| . + +.++++++.+|+.+. + + +.++
T Consensus 99 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~-~-~-----~~~~ 171 (280)
T 1i9g_A 99 PGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADS-E-L-----PDGS 171 (280)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGC-C-C-----CTTC
T ss_pred CCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhc-C-C-----CCCc
Confidence 346999999999999999999875579999999 1 3 357899999999865 1 2 1468
Q ss_pred eeEEEEcCC
Q 042171 67 FDYAFMDAD 75 (125)
Q Consensus 67 fD~v~id~~ 75 (125)
||+|+++..
T Consensus 172 ~D~v~~~~~ 180 (280)
T 1i9g_A 172 VDRAVLDML 180 (280)
T ss_dssp EEEEEEESS
T ss_pred eeEEEECCc
Confidence 999999764
No 148
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=98.62 E-value=6.8e-08 Score=74.12 Aligned_cols=62 Identities=19% Similarity=0.278 Sum_probs=50.7
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe--------------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeE
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID--------------ARVDHKINFIESEALSVLDQLLKDSENEVNFDY 69 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD--------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~ 69 (125)
+..+|||||||+|..++.++++ + ..+|+++| .++.++++++.+|+.+. + + +.++||+
T Consensus 64 ~~~~VLDiGcGtG~ls~~la~~-g-~~~v~gvD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~-~-----~~~~~D~ 134 (340)
T 2fyt_A 64 KDKVVLDVGCGTGILSMFAAKA-G-AKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEV-H-L-----PVEKVDV 134 (340)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-T-CSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTS-C-C-----SCSCEEE
T ss_pred CCCEEEEeeccCcHHHHHHHHc-C-CCEEEEEChHHHHHHHHHHHHHcCCCCcEEEEEeeHHHh-c-C-----CCCcEEE
Confidence 4679999999999999999987 3 46999999 45667899999999865 2 2 1478999
Q ss_pred EEEcC
Q 042171 70 AFMDA 74 (125)
Q Consensus 70 v~id~ 74 (125)
|+++.
T Consensus 135 Ivs~~ 139 (340)
T 2fyt_A 135 IISEW 139 (340)
T ss_dssp EEECC
T ss_pred EEEcC
Confidence 99865
No 149
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.62 E-value=7.6e-08 Score=73.29 Aligned_cols=67 Identities=13% Similarity=0.078 Sum_probs=54.4
Q ss_pred CCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe--------------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEE
Q 042171 5 LKKTIEIGVFTGYSLFLTALTIPEDGQITAID--------------ARVDHKINFIESEALSVLDQLLKDSENEVNFDYA 70 (125)
Q Consensus 5 ~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD--------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v 70 (125)
+.+|||||||+|..+..+++..| +.+++++| .++.++++++.+|..+..+.. ..+||+|
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~------~~~~D~v 252 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHP-QLTGQIWDLPTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFE------GGAADVV 252 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCT-TCEEEEEECGGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGT------TCCEEEE
T ss_pred CCEEEEeCCCcCHHHHHHHHhCC-CCeEEEEECHHHHHHHHHHHHhcCCCCceEEEeCCcccCcccC------CCCccEE
Confidence 67999999999999999999998 68999999 356678999999998653212 3569999
Q ss_pred EEcCCCcC
Q 042171 71 FMDADKDN 78 (125)
Q Consensus 71 ~id~~~~~ 78 (125)
++....+.
T Consensus 253 ~~~~vlh~ 260 (352)
T 3mcz_A 253 MLNDCLHY 260 (352)
T ss_dssp EEESCGGG
T ss_pred EEeccccc
Confidence 99655443
No 150
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.62 E-value=2.8e-08 Score=71.07 Aligned_cols=62 Identities=18% Similarity=0.231 Sum_probs=48.6
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe----------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEEEc
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID----------ARVDHKINFIESEALSVLDQLLKDSENEVNFDYAFMD 73 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD----------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~id 73 (125)
++.+|||||||+|..+..+++.. .+|+++| .....+++++.+|+.+.. ..++||+|++.
T Consensus 42 ~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~~--------~~~~fD~v~~~ 110 (250)
T 2p7i_A 42 RPGNLLELGSFKGDFTSRLQEHF---NDITCVEASEEAISHAQGRLKDGITYIHSRFEDAQ--------LPRRYDNIVLT 110 (250)
T ss_dssp CSSCEEEESCTTSHHHHHHTTTC---SCEEEEESCHHHHHHHHHHSCSCEEEEESCGGGCC--------CSSCEEEEEEE
T ss_pred CCCcEEEECCCCCHHHHHHHHhC---CcEEEEeCCHHHHHHHHHhhhCCeEEEEccHHHcC--------cCCcccEEEEh
Confidence 46789999999999999999864 4799999 112228999999998762 15789999986
Q ss_pred CCC
Q 042171 74 ADK 76 (125)
Q Consensus 74 ~~~ 76 (125)
...
T Consensus 111 ~~l 113 (250)
T 2p7i_A 111 HVL 113 (250)
T ss_dssp SCG
T ss_pred hHH
Confidence 553
No 151
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.62 E-value=1.2e-07 Score=73.67 Aligned_cols=64 Identities=20% Similarity=0.362 Sum_probs=52.8
Q ss_pred CCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeE
Q 042171 5 LKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFDY 69 (125)
Q Consensus 5 ~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~ 69 (125)
..+|||+|||+|..++.+|+. ..+|+++| .++. +++++.+|+.+.++.+... ..+||+
T Consensus 210 ~~~VLDlg~G~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~n~~~n~~~-~~~~~~~d~~~~~~~~~~~---~~~fD~ 282 (382)
T 1wxx_A 210 GERALDVFSYAGGFALHLALG---FREVVAVDSSAEALRRAEENARLNGLG-NVRVLEANAFDLLRRLEKE---GERFDL 282 (382)
T ss_dssp EEEEEEETCTTTHHHHHHHHH---EEEEEEEESCHHHHHHHHHHHHHTTCT-TEEEEESCHHHHHHHHHHT---TCCEEE
T ss_pred CCeEEEeeeccCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCCC-CceEEECCHHHHHHHHHhc---CCCeeE
Confidence 468999999999999999997 47899999 4553 4999999999987765321 468999
Q ss_pred EEEcCC
Q 042171 70 AFMDAD 75 (125)
Q Consensus 70 v~id~~ 75 (125)
|++|..
T Consensus 283 Ii~dpP 288 (382)
T 1wxx_A 283 VVLDPP 288 (382)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 999864
No 152
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.62 E-value=2.8e-08 Score=71.78 Aligned_cols=65 Identities=20% Similarity=0.234 Sum_probs=50.5
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEEEcCCC
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID------ARVDHKINFIESEALSVLDQLLKDSENEVNFDYAFMDADK 76 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~id~~~ 76 (125)
+..+|||||||+|..+..+++. +.+|+++| .....+++++.+|+.+.+..+ ..++||+|++....
T Consensus 41 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~d~~~~~~~~-----~~~~fD~i~~~~~l 111 (240)
T 3dli_A 41 GCRRVLDIGCGRGEFLELCKEE---GIESIGVDINEDMIKFCEGKFNVVKSDAIEYLKSL-----PDKYLDGVMISHFV 111 (240)
T ss_dssp TCSCEEEETCTTTHHHHHHHHH---TCCEEEECSCHHHHHHHHTTSEEECSCHHHHHHTS-----CTTCBSEEEEESCG
T ss_pred CCCeEEEEeCCCCHHHHHHHhC---CCcEEEEECCHHHHHHHHhhcceeeccHHHHhhhc-----CCCCeeEEEECCch
Confidence 4579999999999999999987 56899999 111234899999999875433 25789999986543
No 153
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=98.62 E-value=3.7e-08 Score=69.77 Aligned_cols=62 Identities=19% Similarity=0.178 Sum_probs=49.4
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe------------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEE
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID------------ARVDHKINFIESEALSVLDQLLKDSENEVNFDYAF 71 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~ 71 (125)
+..+|||||||+|..+..+++. ..+++++| ..-..+++++.+|+.+..+ .++||+|+
T Consensus 51 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~--------~~~fD~v~ 119 (216)
T 3ofk_A 51 AVSNGLEIGCAAGAFTEKLAPH---CKRLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFST--------AELFDLIV 119 (216)
T ss_dssp SEEEEEEECCTTSHHHHHHGGG---EEEEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCCC--------SCCEEEEE
T ss_pred CCCcEEEEcCCCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCCC--------CCCccEEE
Confidence 3568999999999999999987 46899999 1222479999999987631 57899999
Q ss_pred EcCCC
Q 042171 72 MDADK 76 (125)
Q Consensus 72 id~~~ 76 (125)
+....
T Consensus 120 ~~~~l 124 (216)
T 3ofk_A 120 VAEVL 124 (216)
T ss_dssp EESCG
T ss_pred EccHH
Confidence 97554
No 154
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=98.62 E-value=1.6e-08 Score=73.26 Aligned_cols=66 Identities=18% Similarity=0.101 Sum_probs=52.5
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEeC---------CCCCcEEEEecchHHHHHHHhhcCCCCCceeEEEEcC
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAIDA---------RVDHKINFIESEALSVLDQLLKDSENEVNFDYAFMDA 74 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD~---------~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~id~ 74 (125)
++.+|||||||+|..+..+++..| +++++++|. ....+++++.+|+.+. + . .++||+|++..
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~-~-~------~~~fD~v~~~~ 103 (259)
T 2p35_A 33 RVLNGYDLGCGPGNSTELLTDRYG-VNVITGIDSDDDMLEKAADRLPNTNFGKADLATW-K-P------AQKADLLYANA 103 (259)
T ss_dssp CCSSEEEETCTTTHHHHHHHHHHC-TTSEEEEESCHHHHHHHHHHSTTSEEEECCTTTC-C-C------SSCEEEEEEES
T ss_pred CCCEEEEecCcCCHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHhCCCcEEEECChhhc-C-c------cCCcCEEEEeC
Confidence 457999999999999999999886 789999991 1135799999999765 2 1 47899999976
Q ss_pred CCcC
Q 042171 75 DKDN 78 (125)
Q Consensus 75 ~~~~ 78 (125)
....
T Consensus 104 ~l~~ 107 (259)
T 2p35_A 104 VFQW 107 (259)
T ss_dssp CGGG
T ss_pred chhh
Confidence 5443
No 155
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.61 E-value=5.5e-08 Score=75.48 Aligned_cols=63 Identities=27% Similarity=0.285 Sum_probs=52.4
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
+..+|||+|||+|..++.+++..+ .++|+++| +++.++++++++|+.+. +. ..++||
T Consensus 217 ~~~~vLD~gCGsG~~~i~~a~~~~-~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~-~~------~~~~fD 288 (373)
T 3tm4_A 217 DGGSVLDPMCGSGTILIELALRRY-SGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQL-SQ------YVDSVD 288 (373)
T ss_dssp CSCCEEETTCTTCHHHHHHHHTTC-CSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGG-GG------TCSCEE
T ss_pred CCCEEEEccCcCcHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhC-Cc------ccCCcC
Confidence 456899999999999999998765 57999999 56767899999999876 32 147899
Q ss_pred EEEEcC
Q 042171 69 YAFMDA 74 (125)
Q Consensus 69 ~v~id~ 74 (125)
+|++|.
T Consensus 289 ~Ii~np 294 (373)
T 3tm4_A 289 FAISNL 294 (373)
T ss_dssp EEEEEC
T ss_pred EEEECC
Confidence 999864
No 156
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=98.61 E-value=3.5e-08 Score=73.23 Aligned_cols=65 Identities=12% Similarity=0.182 Sum_probs=52.5
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
+..+|||||||+|..+..+++.. +.+++++| .++.++++++.+|+.+. | + +.++||
T Consensus 82 ~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~-~-----~~~~fD 152 (297)
T 2o57_A 82 RQAKGLDLGAGYGGAARFLVRKF--GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEI-P-C-----EDNSYD 152 (297)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSC-S-S-----CTTCEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccC-C-C-----CCCCEe
Confidence 45699999999999999999986 36999999 35667899999999764 3 2 257899
Q ss_pred EEEEcCCCc
Q 042171 69 YAFMDADKD 77 (125)
Q Consensus 69 ~v~id~~~~ 77 (125)
+|++.....
T Consensus 153 ~v~~~~~l~ 161 (297)
T 2o57_A 153 FIWSQDAFL 161 (297)
T ss_dssp EEEEESCGG
T ss_pred EEEecchhh
Confidence 999875543
No 157
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.60 E-value=1.3e-07 Score=71.82 Aligned_cols=70 Identities=16% Similarity=0.045 Sum_probs=53.4
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe-------------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEE
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID-------------ARVDHKINFIESEALSVLDQLLKDSENEVNFDYA 70 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD-------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v 70 (125)
...+|||+|||+|..++.+++.++ +++|+++| ....++++++++|..+....+... ...+||.|
T Consensus 26 ~g~~vLD~g~G~G~~s~~la~~~~-~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~~~l~~~--g~~~~D~V 102 (301)
T 1m6y_A 26 DEKIILDCTVGEGGHSRAILEHCP-GCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLKTL--GIEKVDGI 102 (301)
T ss_dssp TTCEEEETTCTTSHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHHHHT--TCSCEEEE
T ss_pred CCCEEEEEeCCcCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHHHHHHhc--CCCCCCEE
Confidence 346899999999999999999987 79999999 112268999999987653222210 12579999
Q ss_pred EEcCCC
Q 042171 71 FMDADK 76 (125)
Q Consensus 71 ~id~~~ 76 (125)
++|...
T Consensus 103 l~D~gv 108 (301)
T 1m6y_A 103 LMDLGV 108 (301)
T ss_dssp EEECSC
T ss_pred EEcCcc
Confidence 998754
No 158
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=98.60 E-value=9.3e-08 Score=69.27 Aligned_cols=67 Identities=21% Similarity=0.253 Sum_probs=52.2
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe------------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEE
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID------------ARVDHKINFIESEALSVLDQLLKDSENEVNFDYAF 71 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~ 71 (125)
+..+|||||||+|..+..+++.. +.+|+++| .....+++++.+|+.+. + + +.++||+|+
T Consensus 55 ~~~~vLdiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~-~-~-----~~~~fD~v~ 125 (266)
T 3ujc_A 55 ENSKVLDIGSGLGGGCMYINEKY--GAHTHGIDICSNIVNMANERVSGNNKIIFEANDILTK-E-F-----PENNFDLIY 125 (266)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTC-C-C-----CTTCEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccC-C-C-----CCCcEEEEe
Confidence 45699999999999999999976 57999999 11116899999999865 2 2 257899999
Q ss_pred EcCCCcCC
Q 042171 72 MDADKDNY 79 (125)
Q Consensus 72 id~~~~~~ 79 (125)
+.......
T Consensus 126 ~~~~l~~~ 133 (266)
T 3ujc_A 126 SRDAILAL 133 (266)
T ss_dssp EESCGGGS
T ss_pred HHHHHHhc
Confidence 97654443
No 159
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.60 E-value=1.6e-08 Score=75.51 Aligned_cols=61 Identities=11% Similarity=0.281 Sum_probs=50.6
Q ss_pred CEEEEEcCcccHHHHHHHhhCCCCCEEEEEe-C---------------------C-CCCcEEEEecchHHHHHHHhhcCC
Q 042171 6 KKTIEIGVFTGYSLFLTALTIPEDGQITAID-A---------------------R-VDHKINFIESEALSVLDQLLKDSE 62 (125)
Q Consensus 6 ~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD-~---------------------~-~~~~i~~~~gd~~~~l~~~~~~~~ 62 (125)
.+|||+|||+|..++++|+. +++|+++| . + +.++++++++|+.+.++.+
T Consensus 90 ~~VLDl~~G~G~dal~lA~~---g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~----- 161 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASV---GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDI----- 161 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHH---TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTC-----
T ss_pred CEEEEcCCcCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhC-----
Confidence 68999999999999999997 57899999 0 1 2257999999999887654
Q ss_pred CCCceeEEEEcCC
Q 042171 63 NEVNFDYAFMDAD 75 (125)
Q Consensus 63 ~~~~fD~v~id~~ 75 (125)
..+||+||+|-.
T Consensus 162 -~~~fDvV~lDP~ 173 (258)
T 2oyr_A 162 -TPRPQVVYLDPM 173 (258)
T ss_dssp -SSCCSEEEECCC
T ss_pred -cccCCEEEEcCC
Confidence 347999999854
No 160
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=98.60 E-value=1.1e-07 Score=72.95 Aligned_cols=62 Identities=21% Similarity=0.281 Sum_probs=50.8
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe--------------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeE
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID--------------ARVDHKINFIESEALSVLDQLLKDSENEVNFDY 69 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD--------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~ 69 (125)
+..+|||||||+|..++.++++ + ..+|+++| .++.++++++.+|+.+. + + .++||+
T Consensus 50 ~~~~VLDiGcGtG~ls~~la~~-g-~~~V~~vD~s~~~~~a~~~~~~~~l~~~v~~~~~d~~~~-~-~------~~~~D~ 119 (348)
T 2y1w_A 50 KDKIVLDVGCGSGILSFFAAQA-G-ARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEV-S-L------PEQVDI 119 (348)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-T-CSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTC-C-C------SSCEEE
T ss_pred CcCEEEEcCCCccHHHHHHHhC-C-CCEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcchhhC-C-C------CCceeE
Confidence 5679999999999999999986 3 46999999 35667899999999865 2 2 367999
Q ss_pred EEEcCC
Q 042171 70 AFMDAD 75 (125)
Q Consensus 70 v~id~~ 75 (125)
|++...
T Consensus 120 Ivs~~~ 125 (348)
T 2y1w_A 120 IISEPM 125 (348)
T ss_dssp EEECCC
T ss_pred EEEeCc
Confidence 999743
No 161
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.59 E-value=1.6e-07 Score=72.73 Aligned_cols=76 Identities=12% Similarity=0.110 Sum_probs=55.7
Q ss_pred CCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCC-------
Q 042171 5 LKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSE------- 62 (125)
Q Consensus 5 ~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~------- 62 (125)
..+|||+|||+|..++.+|+. ..+|+++| .++ ++++++.+|+.+.++.+.....
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~---~~~V~gvd~~~~ai~~a~~n~~~ng~-~~v~~~~~d~~~~~~~~~~~~~~~~l~~~ 289 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARN---FDRVLATEIAKPSVAAAQYNIAANHI-DNVQIIRMAAEEFTQAMNGVREFNRLQGI 289 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGG---SSEEEEECCCHHHHHHHHHHHHHTTC-CSEEEECCCSHHHHHHHSSCCCCTTGGGS
T ss_pred CCEEEEccCCCCHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHcCC-CceEEEECCHHHHHHHHhhcccccccccc
Confidence 468999999999999999985 46899999 455 5899999999998776531100
Q ss_pred --CCCceeEEEEcCCCcC-CHHHHh
Q 042171 63 --NEVNFDYAFMDADKDN-YCNYMR 84 (125)
Q Consensus 63 --~~~~fD~v~id~~~~~-~~~~~~ 84 (125)
+..+||+|++|-.... ....++
T Consensus 290 ~~~~~~fD~Vv~dPPr~g~~~~~~~ 314 (369)
T 3bt7_A 290 DLKSYQCETIFVDPPRSGLDSETEK 314 (369)
T ss_dssp CGGGCCEEEEEECCCTTCCCHHHHH
T ss_pred ccccCCCCEEEECcCccccHHHHHH
Confidence 0037999999865432 334444
No 162
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.59 E-value=6.1e-08 Score=74.69 Aligned_cols=68 Identities=19% Similarity=0.165 Sum_probs=54.5
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe--------------CCCCCcEEEEecchHHHH-HHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID--------------ARVDHKINFIESEALSVL-DQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD--------------~~~~~~i~~~~gd~~~~l-~~~~~~~~~~~~fD 68 (125)
++.+|||||||+|..+..++++.| +.+++++| .++.++|+++.+|..+.. | + .++||
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~------p~~~D 250 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNK-EVEVTIVDLPQQLEMMRKQTAGLSGSERIHGHGANLLDRDVP-F------PTGFD 250 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHST-TCEEEEEECHHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCC-C------CCCCS
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCC-CCEEEEEeCHHHHHHHHHHHHhcCcccceEEEEccccccCCC-C------CCCcC
Confidence 568999999999999999999988 78999999 345578999999987641 1 1 25799
Q ss_pred EEEEcCCCcCC
Q 042171 69 YAFMDADKDNY 79 (125)
Q Consensus 69 ~v~id~~~~~~ 79 (125)
+|++....+.+
T Consensus 251 ~v~~~~vlh~~ 261 (363)
T 3dp7_A 251 AVWMSQFLDCF 261 (363)
T ss_dssp EEEEESCSTTS
T ss_pred EEEEechhhhC
Confidence 99986654433
No 163
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=98.58 E-value=1.3e-07 Score=69.88 Aligned_cols=59 Identities=15% Similarity=0.169 Sum_probs=48.8
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
+..+|||+|||+|..+..+++. +.+|+++| .++ +++++.+|+.+... .++||
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~---g~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~--------~~~fD 186 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLL---GYDVTSWDHNENSIAFLNETKEKENL--NISTALYDINAANI--------QENYD 186 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCGGGCCC--------CSCEE
T ss_pred CCCcEEEECCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHHcCC--ceEEEEeccccccc--------cCCcc
Confidence 5679999999999999999987 56999999 233 89999999986521 47899
Q ss_pred EEEEcCC
Q 042171 69 YAFMDAD 75 (125)
Q Consensus 69 ~v~id~~ 75 (125)
+|++...
T Consensus 187 ~i~~~~~ 193 (286)
T 3m70_A 187 FIVSTVV 193 (286)
T ss_dssp EEEECSS
T ss_pred EEEEccc
Confidence 9998764
No 164
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=98.58 E-value=1.5e-07 Score=69.45 Aligned_cols=60 Identities=5% Similarity=-0.036 Sum_probs=49.0
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
+..+|||||||+|..+..+++..+ .+|+++| .++.++++++.+|+.+. .++||
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~----------~~~fD 131 (287)
T 1kpg_A 64 PGMTLLDVGCGWGATMMRAVEKYD--VNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQF----------DEPVD 131 (287)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGC----------CCCCS
T ss_pred CcCEEEEECCcccHHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhC----------CCCee
Confidence 346999999999999999997664 5999999 35567899999998643 26799
Q ss_pred EEEEcCC
Q 042171 69 YAFMDAD 75 (125)
Q Consensus 69 ~v~id~~ 75 (125)
+|++...
T Consensus 132 ~v~~~~~ 138 (287)
T 1kpg_A 132 RIVSIGA 138 (287)
T ss_dssp EEEEESC
T ss_pred EEEEeCc
Confidence 9998754
No 165
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=98.57 E-value=1.5e-07 Score=70.61 Aligned_cols=61 Identities=8% Similarity=-0.027 Sum_probs=50.0
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
+..+|||||||+|..+..+++.. +.+|+++| .++.++++++.+|+.+. .++||
T Consensus 90 ~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----------~~~fD 157 (318)
T 2fk8_A 90 PGMTLLDIGCGWGTTMRRAVERF--DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDF----------AEPVD 157 (318)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGC----------CCCCS
T ss_pred CcCEEEEEcccchHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHC----------CCCcC
Confidence 35699999999999999999886 46999999 35667899999998643 26799
Q ss_pred EEEEcCCC
Q 042171 69 YAFMDADK 76 (125)
Q Consensus 69 ~v~id~~~ 76 (125)
+|++....
T Consensus 158 ~v~~~~~l 165 (318)
T 2fk8_A 158 RIVSIEAF 165 (318)
T ss_dssp EEEEESCG
T ss_pred EEEEeChH
Confidence 99987543
No 166
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=98.57 E-value=4.9e-08 Score=70.49 Aligned_cols=66 Identities=9% Similarity=0.068 Sum_probs=50.1
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe----------CCC----CCcEEEEecchHHHHHHHhhcCCCCCceeE
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID----------ARV----DHKINFIESEALSVLDQLLKDSENEVNFDY 69 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD----------~~~----~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~ 69 (125)
++.+|||||||+|..+..+++.. ..+++++| ... ..+++++.+|+.+. + + ..++||+
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~-~-~-----~~~~fD~ 149 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL--FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDF-T-P-----EPDSYDV 149 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT--CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGC-C-C-----CSSCEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhc-C-C-----CCCCEEE
Confidence 46799999999999999988875 46999999 111 24699999998764 2 1 1468999
Q ss_pred EEEcCCCcC
Q 042171 70 AFMDADKDN 78 (125)
Q Consensus 70 v~id~~~~~ 78 (125)
|+++.....
T Consensus 150 v~~~~~l~~ 158 (241)
T 2ex4_A 150 IWIQWVIGH 158 (241)
T ss_dssp EEEESCGGG
T ss_pred EEEcchhhh
Confidence 999865433
No 167
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=98.56 E-value=1.1e-07 Score=68.26 Aligned_cols=64 Identities=16% Similarity=0.289 Sum_probs=51.1
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe-----------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEEE
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID-----------ARVDHKINFIESEALSVLDQLLKDSENEVNFDYAFM 72 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD-----------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~i 72 (125)
+..+|||||||+|..+..+++. +.+++++| .....+++++.+|+.+. + + +.++||+|++
T Consensus 53 ~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~-~-~-----~~~~fD~v~~ 122 (242)
T 3l8d_A 53 KEAEVLDVGCGDGYGTYKLSRT---GYKAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSL-P-F-----ENEQFEAIMA 122 (242)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBC-S-S-----CTTCEEEEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHhhcccCCceEEEcchhcC-C-C-----CCCCccEEEE
Confidence 4679999999999999999987 57999999 12346899999999864 2 2 2578999998
Q ss_pred cCCCc
Q 042171 73 DADKD 77 (125)
Q Consensus 73 d~~~~ 77 (125)
.....
T Consensus 123 ~~~l~ 127 (242)
T 3l8d_A 123 INSLE 127 (242)
T ss_dssp ESCTT
T ss_pred cChHh
Confidence 76544
No 168
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=98.56 E-value=8.3e-08 Score=69.94 Aligned_cols=63 Identities=10% Similarity=0.173 Sum_probs=49.4
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
++.+|||||||+|..+..+++.. .+|+++| .++ .+++++.+|+.+. | + +.++||
T Consensus 37 ~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~l~~a~~~~~~~~~-~~v~~~~~d~~~l-~-~-----~~~~fD 105 (260)
T 1vl5_A 37 GNEEVLDVATGGGHVANAFAPFV---KKVVAFDLTEDILKVARAFIEGNGH-QQVEYVQGDAEQM-P-F-----TDERFH 105 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHTTC-CSEEEEECCC-CC-C-S-----CTTCEE
T ss_pred CCCEEEEEeCCCCHHHHHHHHhC---CEEEEEeCCHHHHHHHHHHHHhcCC-CceEEEEecHHhC-C-C-----CCCCEE
Confidence 46799999999999999999874 4899999 233 4799999999764 3 2 257899
Q ss_pred EEEEcCCCc
Q 042171 69 YAFMDADKD 77 (125)
Q Consensus 69 ~v~id~~~~ 77 (125)
+|++.....
T Consensus 106 ~V~~~~~l~ 114 (260)
T 1vl5_A 106 IVTCRIAAH 114 (260)
T ss_dssp EEEEESCGG
T ss_pred EEEEhhhhH
Confidence 999876543
No 169
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=98.55 E-value=1.1e-07 Score=73.84 Aligned_cols=73 Identities=12% Similarity=0.256 Sum_probs=54.0
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe----------C----------C-CC-CcEEEEecchHHHHHHHhhcC
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID----------A----------R-VD-HKINFIESEALSVLDQLLKDS 61 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD----------~----------~-~~-~~i~~~~gd~~~~l~~~~~~~ 61 (125)
+..+|||||||+|..++.+++..+++++|+++| . | +. .+++++++|+.+... +....
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~-~~~~~ 161 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLAT-AEPEG 161 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGG-CBSCC
T ss_pred CCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhh-cccCC
Confidence 467999999999999999999885578999999 1 2 22 689999999986521 00000
Q ss_pred CCCCceeEEEEcCCCc
Q 042171 62 ENEVNFDYAFMDADKD 77 (125)
Q Consensus 62 ~~~~~fD~v~id~~~~ 77 (125)
-+.++||+|++.....
T Consensus 162 ~~~~~fD~V~~~~~l~ 177 (383)
T 4fsd_A 162 VPDSSVDIVISNCVCN 177 (383)
T ss_dssp CCTTCEEEEEEESCGG
T ss_pred CCCCCEEEEEEccchh
Confidence 0257899999976543
No 170
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=98.55 E-value=1.2e-07 Score=68.38 Aligned_cols=62 Identities=21% Similarity=0.297 Sum_probs=50.7
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
...+|||+|||+|..++.+++. .++++++| .++.++++++.+|+.+.+. ...+||
T Consensus 91 ~~~~vldiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-------~~~~~D 160 (248)
T 2yvl_A 91 KEKRVLEFGTGSGALLAVLSEV---AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEV-------PEGIFH 160 (248)
T ss_dssp TTCEEEEECCTTSHHHHHHHHH---SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCC-------CTTCBS
T ss_pred CCCEEEEeCCCccHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhccc-------CCCccc
Confidence 4569999999999999999998 58999999 3555789999999986531 136799
Q ss_pred EEEEcCC
Q 042171 69 YAFMDAD 75 (125)
Q Consensus 69 ~v~id~~ 75 (125)
+|+++..
T Consensus 161 ~v~~~~~ 167 (248)
T 2yvl_A 161 AAFVDVR 167 (248)
T ss_dssp EEEECSS
T ss_pred EEEECCc
Confidence 9999654
No 171
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.55 E-value=1.4e-07 Score=72.35 Aligned_cols=66 Identities=20% Similarity=0.255 Sum_probs=53.5
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe--------------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeE
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID--------------ARVDHKINFIESEALSVLDQLLKDSENEVNFDY 69 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD--------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~ 69 (125)
+..+|||||||+|..+..+++..| +.+++++| .++.++|+++.+|..+.+| ..||+
T Consensus 182 ~~~~vlDvG~G~G~~~~~l~~~~~-~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~---------~~~D~ 251 (374)
T 1qzz_A 182 AVRHVLDVGGGNGGMLAAIALRAP-HLRGTLVELAGPAERARRRFADAGLADRVTVAEGDFFKPLP---------VTADV 251 (374)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHCT-TCEEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCS---------CCEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHCC-CCEEEEEeCHHHHHHHHHHHHhcCCCCceEEEeCCCCCcCC---------CCCCE
Confidence 457999999999999999999987 78999999 4566789999999875322 34999
Q ss_pred EEEcCCCcCC
Q 042171 70 AFMDADKDNY 79 (125)
Q Consensus 70 v~id~~~~~~ 79 (125)
|++....+.+
T Consensus 252 v~~~~vl~~~ 261 (374)
T 1qzz_A 252 VLLSFVLLNW 261 (374)
T ss_dssp EEEESCGGGS
T ss_pred EEEeccccCC
Confidence 9997654433
No 172
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=98.55 E-value=2e-07 Score=68.54 Aligned_cols=68 Identities=16% Similarity=0.156 Sum_probs=50.5
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
+..+|||+|||+|..++.+++. . .+|+++| .++. ++++.+|+.+.++ .++||
T Consensus 120 ~~~~VLDiGcG~G~l~~~la~~-g--~~v~gvDi~~~~v~~a~~n~~~~~~~--v~~~~~d~~~~~~--------~~~fD 186 (254)
T 2nxc_A 120 PGDKVLDLGTGSGVLAIAAEKL-G--GKALGVDIDPMVLPQAEANAKRNGVR--PRFLEGSLEAALP--------FGPFD 186 (254)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-T--CEEEEEESCGGGHHHHHHHHHHTTCC--CEEEESCHHHHGG--------GCCEE
T ss_pred CCCEEEEecCCCcHHHHHHHHh-C--CeEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChhhcCc--------CCCCC
Confidence 4679999999999999998885 2 3999999 2332 8999999987532 36899
Q ss_pred EEEEcCCCcCCHHHHh
Q 042171 69 YAFMDADKDNYCNYMR 84 (125)
Q Consensus 69 ~v~id~~~~~~~~~~~ 84 (125)
+|+++...+....+++
T Consensus 187 ~Vv~n~~~~~~~~~l~ 202 (254)
T 2nxc_A 187 LLVANLYAELHAALAP 202 (254)
T ss_dssp EEEEECCHHHHHHHHH
T ss_pred EEEECCcHHHHHHHHH
Confidence 9998754333333333
No 173
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.54 E-value=1.6e-07 Score=69.88 Aligned_cols=60 Identities=10% Similarity=0.044 Sum_probs=49.4
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe----------CCC--------CCcEEEEecchHHHHHHHhhcCCCCC
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID----------ARV--------DHKINFIESEALSVLDQLLKDSENEV 65 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD----------~~~--------~~~i~~~~gd~~~~l~~~~~~~~~~~ 65 (125)
++++|||||||+|+.+..+++. + .+|+++| ..+ .++++++.+|+.+.+ +
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~-~--~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~----------~ 138 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKY-D--THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI----------K 138 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTS-S--CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC----------C
T ss_pred CCCEEEEEeCCcCHHHHHHHhC-C--CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH----------h
Confidence 5789999999999999999987 4 8999999 112 358999999997652 4
Q ss_pred ceeEEEEcCCC
Q 042171 66 NFDYAFMDADK 76 (125)
Q Consensus 66 ~fD~v~id~~~ 76 (125)
+||+|++|...
T Consensus 139 ~fD~Ii~d~~d 149 (262)
T 2cmg_A 139 KYDLIFCLQEP 149 (262)
T ss_dssp CEEEEEESSCC
T ss_pred hCCEEEECCCC
Confidence 69999999754
No 174
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=98.54 E-value=2.6e-07 Score=65.58 Aligned_cols=63 Identities=25% Similarity=0.313 Sum_probs=49.4
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCC----CCcEEEEecchHHHHHHHhhcCCCC
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARV----DHKINFIESEALSVLDQLLKDSENE 64 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~----~~~i~~~~gd~~~~l~~~~~~~~~~ 64 (125)
+..+|||||||+|..+..+++. +.+++++| .++ ..+++++.+|+.+. + + ..
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~-~-~-----~~ 99 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELASK---GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSL-S-F-----HD 99 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSC-C-S-----CT
T ss_pred CCCeEEEECCCCCHHHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEeccccc-C-C-----CC
Confidence 4679999999999999999987 57999999 122 23789999998754 2 2 25
Q ss_pred CceeEEEEcCCC
Q 042171 65 VNFDYAFMDADK 76 (125)
Q Consensus 65 ~~fD~v~id~~~ 76 (125)
++||+|++....
T Consensus 100 ~~~D~v~~~~~l 111 (235)
T 3sm3_A 100 SSFDFAVMQAFL 111 (235)
T ss_dssp TCEEEEEEESCG
T ss_pred CceeEEEEcchh
Confidence 789999986543
No 175
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=98.53 E-value=1e-07 Score=69.03 Aligned_cols=65 Identities=18% Similarity=0.161 Sum_probs=51.1
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe------------C-CCCCcEEEEecchHHHHHHHhhcCCCCCceeEE
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID------------A-RVDHKINFIESEALSVLDQLLKDSENEVNFDYA 70 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD------------~-~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v 70 (125)
+..+|||||||+|..+..+++. +.+++++| . +...+++++.+|+.+. + + ..++||+|
T Consensus 39 ~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~-~-~-----~~~~fD~v 108 (263)
T 2yqz_A 39 EEPVFLELGVGTGRIALPLIAR---GYRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAI-P-L-----PDESVHGV 108 (263)
T ss_dssp SCCEEEEETCTTSTTHHHHHTT---TCEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSC-C-S-----CTTCEEEE
T ss_pred CCCEEEEeCCcCCHHHHHHHHC---CCEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccC-C-C-----CCCCeeEE
Confidence 4579999999999999999986 57999999 1 2346899999999754 3 2 25789999
Q ss_pred EEcCCCcC
Q 042171 71 FMDADKDN 78 (125)
Q Consensus 71 ~id~~~~~ 78 (125)
++......
T Consensus 109 ~~~~~l~~ 116 (263)
T 2yqz_A 109 IVVHLWHL 116 (263)
T ss_dssp EEESCGGG
T ss_pred EECCchhh
Confidence 99765433
No 176
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=98.53 E-value=2e-07 Score=67.55 Aligned_cols=63 Identities=10% Similarity=0.183 Sum_probs=50.1
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe------------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEE
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID------------ARVDHKINFIESEALSVLDQLLKDSENEVNFDYAF 71 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~ 71 (125)
+..+|||||||+|..+..+++..+ .+++++| .. ..+++++.+|+.+. + + ..++||+|+
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~-~~~~~~~~~d~~~~-~-~-----~~~~fD~v~ 113 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHGA--KKVLGIDLSERMLTEAKRKTT-SPVVCYEQKAIEDI-A-I-----EPDAYNVVL 113 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHCC-CTTEEEEECCGGGC-C-C-----CTTCEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHcCC--CEEEEEECCHHHHHHHHHhhc-cCCeEEEEcchhhC-C-C-----CCCCeEEEE
Confidence 567999999999999999998743 3999999 22 46899999999754 3 2 257899999
Q ss_pred EcCCC
Q 042171 72 MDADK 76 (125)
Q Consensus 72 id~~~ 76 (125)
+....
T Consensus 114 ~~~~l 118 (253)
T 3g5l_A 114 SSLAL 118 (253)
T ss_dssp EESCG
T ss_pred Echhh
Confidence 87643
No 177
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.53 E-value=1.2e-07 Score=71.76 Aligned_cols=64 Identities=14% Similarity=0.067 Sum_probs=52.6
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe--------------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeE
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID--------------ARVDHKINFIESEALSVLDQLLKDSENEVNFDY 69 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD--------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~ 69 (125)
+..+|||||||+|..+..++++.| +.+++++| .++.++|+++.+|..+.+ ..+||+
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---------p~~~D~ 238 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHE-DLSGTVLDLQGPASAAHRRFLDTGLSGRAQVVVGSFFDPL---------PAGAGG 238 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCT-TCEEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC---------CCSCSE
T ss_pred CCCEEEEeCCChhHHHHHHHHHCC-CCeEEEecCHHHHHHHHHhhhhcCcCcCeEEecCCCCCCC---------CCCCcE
Confidence 357999999999999999999998 78999999 467789999999997332 137999
Q ss_pred EEEcCCCc
Q 042171 70 AFMDADKD 77 (125)
Q Consensus 70 v~id~~~~ 77 (125)
|++-...+
T Consensus 239 v~~~~vlh 246 (332)
T 3i53_A 239 YVLSAVLH 246 (332)
T ss_dssp EEEESCGG
T ss_pred EEEehhhc
Confidence 99865443
No 178
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.53 E-value=8.8e-08 Score=67.19 Aligned_cols=62 Identities=11% Similarity=0.012 Sum_probs=49.4
Q ss_pred CCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEEEcCC
Q 042171 5 LKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------ARVDHKINFIESEALSVLDQLLKDSENEVNFDYAFMDAD 75 (125)
Q Consensus 5 ~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~id~~ 75 (125)
..+|||||||+|..+..+++. +.+++++| .....+++++.+|+.+. + + ..++||+|++...
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~-~-~-----~~~~fD~v~~~~~ 111 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL---GHQIEGLEPATRLVELARQTHPSVTFHHGTITDL-S-D-----SPKRWAGLLAWYS 111 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT---TCCEEEECCCHHHHHHHHHHCTTSEEECCCGGGG-G-G-----SCCCEEEEEEESS
T ss_pred CCeEEEecCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHHhCCCCeEEeCccccc-c-c-----CCCCeEEEEehhh
Confidence 578999999999999999987 56899999 11125799999999875 3 2 2578999999765
Q ss_pred C
Q 042171 76 K 76 (125)
Q Consensus 76 ~ 76 (125)
.
T Consensus 112 l 112 (203)
T 3h2b_A 112 L 112 (203)
T ss_dssp S
T ss_pred H
Confidence 3
No 179
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=98.53 E-value=1.3e-07 Score=67.11 Aligned_cols=62 Identities=11% Similarity=0.025 Sum_probs=47.1
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe-C-----------------CCCCcEEEEecchHHHHHHHhhcCCCCC
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID-A-----------------RVDHKINFIESEALSVLDQLLKDSENEV 65 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD-~-----------------~~~~~i~~~~gd~~~~l~~~~~~~~~~~ 65 (125)
+..+|||||||+|..+..+++..| +++|+++| + .-.++++++++|+.+. |. ..+
T Consensus 27 ~~~~vLDiGcG~G~~~~~la~~~p-~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l-~~------~~~ 98 (218)
T 3mq2_A 27 YDDVVLDVGTGDGKHPYKVARQNP-SRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERL-PP------LSG 98 (218)
T ss_dssp SSEEEEEESCTTCHHHHHHHHHCT-TEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTC-CS------CCC
T ss_pred CCCEEEEecCCCCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhC-CC------CCC
Confidence 456899999999999999999887 79999999 0 1114799999999874 32 134
Q ss_pred ceeEEEEcC
Q 042171 66 NFDYAFMDA 74 (125)
Q Consensus 66 ~fD~v~id~ 74 (125)
+ |.|++..
T Consensus 99 ~-d~v~~~~ 106 (218)
T 3mq2_A 99 V-GELHVLM 106 (218)
T ss_dssp E-EEEEEES
T ss_pred C-CEEEEEc
Confidence 4 7777543
No 180
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.52 E-value=3.2e-07 Score=72.04 Aligned_cols=60 Identities=20% Similarity=0.248 Sum_probs=48.0
Q ss_pred CCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeE
Q 042171 5 LKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFDY 69 (125)
Q Consensus 5 ~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~ 69 (125)
..+|||+|||+|..++.+|+. +.+|+++| .++.. ++.++|+.+.++.+ .+.||+
T Consensus 215 g~~VLDlg~GtG~~sl~~a~~---ga~V~avDis~~al~~a~~n~~~ng~~~--~~~~~D~~~~l~~~------~~~fD~ 283 (393)
T 4dmg_A 215 GERVLDVYSYVGGFALRAARK---GAYALAVDKDLEALGVLDQAALRLGLRV--DIRHGEALPTLRGL------EGPFHH 283 (393)
T ss_dssp TCEEEEESCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTCCC--EEEESCHHHHHHTC------CCCEEE
T ss_pred CCeEEEcccchhHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHHHhCCCC--cEEEccHHHHHHHh------cCCCCE
Confidence 679999999999999999986 45699999 34543 45699999887654 234999
Q ss_pred EEEcCC
Q 042171 70 AFMDAD 75 (125)
Q Consensus 70 v~id~~ 75 (125)
|++|..
T Consensus 284 Ii~dpP 289 (393)
T 4dmg_A 284 VLLDPP 289 (393)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 999864
No 181
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.52 E-value=1.6e-07 Score=70.50 Aligned_cols=59 Identities=8% Similarity=0.140 Sum_probs=46.7
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe-CCC--------CC------cEEEE--ecchHHHHHHHhhcCCCCCc
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID-ARV--------DH------KINFI--ESEALSVLDQLLKDSENEVN 66 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD-~~~--------~~------~i~~~--~gd~~~~l~~~~~~~~~~~~ 66 (125)
+..+|||+|||+|.++..+++. ++|+++| ... .. +++++ ++|+.+. | .++
T Consensus 82 ~g~~VLDlGcGtG~~s~~la~~----~~V~gVD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l-~--------~~~ 148 (276)
T 2wa2_A 82 LKGTVVDLGCGRGSWSYYAASQ----PNVREVKAYTLGTSGHEKPRLVETFGWNLITFKSKVDVTKM-E--------PFQ 148 (276)
T ss_dssp CCEEEEEESCTTCHHHHHHHTS----TTEEEEEEECCCCTTSCCCCCCCCTTGGGEEEECSCCGGGC-C--------CCC
T ss_pred CCCEEEEeccCCCHHHHHHHHc----CCEEEEECchhhhhhhhchhhhhhcCCCeEEEeccCcHhhC-C--------CCC
Confidence 3468999999999999999986 6899999 111 11 68899 8998763 2 468
Q ss_pred eeEEEEcCC
Q 042171 67 FDYAFMDAD 75 (125)
Q Consensus 67 fD~v~id~~ 75 (125)
||+|++|..
T Consensus 149 fD~Vvsd~~ 157 (276)
T 2wa2_A 149 ADTVLCDIG 157 (276)
T ss_dssp CSEEEECCC
T ss_pred cCEEEECCC
Confidence 999999876
No 182
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.52 E-value=1.5e-07 Score=68.84 Aligned_cols=67 Identities=19% Similarity=0.230 Sum_probs=50.2
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe-CC--------------------CCCcEEEEecc-hHH-HHHHHhhc
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID-AR--------------------VDHKINFIESE-ALS-VLDQLLKD 60 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD-~~--------------------~~~~i~~~~gd-~~~-~l~~~~~~ 60 (125)
+..+|||||||+|..+..+++..+++++|+++| +. +.++++++.+| ... .+| +
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~-~--- 118 (275)
T 3bkx_A 43 PGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGP-I--- 118 (275)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGG-G---
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccCC-C---
Confidence 456999999999999999999875468999999 22 22579999998 221 122 2
Q ss_pred CCCCCceeEEEEcCCC
Q 042171 61 SENEVNFDYAFMDADK 76 (125)
Q Consensus 61 ~~~~~~fD~v~id~~~ 76 (125)
..++||+|++....
T Consensus 119 --~~~~fD~v~~~~~l 132 (275)
T 3bkx_A 119 --ADQHFDRVVLAHSL 132 (275)
T ss_dssp --TTCCCSEEEEESCG
T ss_pred --CCCCEEEEEEccch
Confidence 14789999986553
No 183
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.52 E-value=1.7e-07 Score=74.13 Aligned_cols=74 Identities=9% Similarity=0.160 Sum_probs=55.4
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
+..+|||+|||+|..++.+|+. ..+|+++| .++ .+++++.+|+.+.++.+.. ..++||
T Consensus 286 ~~~~VLDlgcG~G~~~~~la~~---~~~V~gvD~s~~al~~A~~n~~~~~~-~~v~f~~~d~~~~l~~~~~---~~~~fD 358 (433)
T 1uwv_A 286 PEDRVLDLFCGMGNFTLPLATQ---AASVVGVEGVPALVEKGQQNARLNGL-QNVTFYHENLEEDVTKQPW---AKNGFD 358 (433)
T ss_dssp TTCEEEEESCTTTTTHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHTTC-CSEEEEECCTTSCCSSSGG---GTTCCS
T ss_pred CCCEEEECCCCCCHHHHHHHhh---CCEEEEEeCCHHHHHHHHHHHHHcCC-CceEEEECCHHHHhhhhhh---hcCCCC
Confidence 4569999999999999999987 58999999 345 4899999999875432110 146799
Q ss_pred EEEEcCCCcCCHHHHh
Q 042171 69 YAFMDADKDNYCNYMR 84 (125)
Q Consensus 69 ~v~id~~~~~~~~~~~ 84 (125)
+|++|-........++
T Consensus 359 ~Vv~dPPr~g~~~~~~ 374 (433)
T 1uwv_A 359 KVLLDPARAGAAGVMQ 374 (433)
T ss_dssp EEEECCCTTCCHHHHH
T ss_pred EEEECCCCccHHHHHH
Confidence 9999866544444444
No 184
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.50 E-value=1.5e-07 Score=70.15 Aligned_cols=58 Identities=10% Similarity=0.115 Sum_probs=46.2
Q ss_pred CCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe-CCC--------CC------cEEEE--ecchHHHHHHHhhcCCCCCce
Q 042171 5 LKKTIEIGVFTGYSLFLTALTIPEDGQITAID-ARV--------DH------KINFI--ESEALSVLDQLLKDSENEVNF 67 (125)
Q Consensus 5 ~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD-~~~--------~~------~i~~~--~gd~~~~l~~~~~~~~~~~~f 67 (125)
..+|||+|||+|.++..+++. ++|++|| ... .. +++++ ++|+.+. + .++|
T Consensus 75 g~~VLDlGcGtG~~s~~la~~----~~V~gvD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l-~--------~~~f 141 (265)
T 2oxt_A 75 TGRVVDLGCGRGGWSYYAASR----PHVMDVRAYTLGVGGHEVPRITESYGWNIVKFKSRVDIHTL-P--------VERT 141 (265)
T ss_dssp CEEEEEESCTTSHHHHHHHTS----TTEEEEEEECCCCSSCCCCCCCCBTTGGGEEEECSCCTTTS-C--------CCCC
T ss_pred CCEEEEeCcCCCHHHHHHHHc----CcEEEEECchhhhhhhhhhhhhhccCCCeEEEecccCHhHC-C--------CCCC
Confidence 468999999999999999986 7899999 111 11 68888 8888753 2 4689
Q ss_pred eEEEEcCC
Q 042171 68 DYAFMDAD 75 (125)
Q Consensus 68 D~v~id~~ 75 (125)
|+|++|..
T Consensus 142 D~V~sd~~ 149 (265)
T 2oxt_A 142 DVIMCDVG 149 (265)
T ss_dssp SEEEECCC
T ss_pred cEEEEeCc
Confidence 99999876
No 185
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=98.50 E-value=2.7e-07 Score=64.03 Aligned_cols=61 Identities=15% Similarity=0.227 Sum_probs=49.1
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
++.+|||||||+|..+..+++. +.+++++| .++ .+++++.+|+.+. + + .++||
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~~d~~~~-~-~------~~~~D 99 (199)
T 2xvm_A 32 KPGKTLDLGCGNGRNSLYLAAN---GYDVDAWDKNAMSIANVERIKSIENL-DNLHTRVVDLNNL-T-F------DRQYD 99 (199)
T ss_dssp CSCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTC-TTEEEEECCGGGC-C-C------CCCEE
T ss_pred CCCeEEEEcCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHhCCC-CCcEEEEcchhhC-C-C------CCCce
Confidence 4679999999999999999987 57999999 233 4699999998764 2 1 36899
Q ss_pred EEEEcCCC
Q 042171 69 YAFMDADK 76 (125)
Q Consensus 69 ~v~id~~~ 76 (125)
+|++....
T Consensus 100 ~v~~~~~l 107 (199)
T 2xvm_A 100 FILSTVVL 107 (199)
T ss_dssp EEEEESCG
T ss_pred EEEEcchh
Confidence 99987543
No 186
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.50 E-value=9.3e-08 Score=72.55 Aligned_cols=61 Identities=25% Similarity=0.292 Sum_probs=47.8
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe------------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEE
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID------------ARVDHKINFIESEALSVLDQLLKDSENEVNFDYAF 71 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~ 71 (125)
+..+|||||||+|+.|..+++. ..+|+++| ..-.++++++++|+.+. + +. ..+||.|+
T Consensus 50 ~~~~VLEIG~G~G~lT~~La~~---~~~V~aVEid~~li~~a~~~~~~~~~v~vi~gD~l~~-~-~~-----~~~fD~Iv 119 (295)
T 3gru_A 50 KDDVVLEIGLGKGILTEELAKN---AKKVYVIEIDKSLEPYANKLKELYNNIEIIWGDALKV-D-LN-----KLDFNKVV 119 (295)
T ss_dssp TTCEEEEECCTTSHHHHHHHHH---SSEEEEEESCGGGHHHHHHHHHHCSSEEEEESCTTTS-C-GG-----GSCCSEEE
T ss_pred CcCEEEEECCCchHHHHHHHhc---CCEEEEEECCHHHHHHHHHHhccCCCeEEEECchhhC-C-cc-----cCCccEEE
Confidence 3469999999999999999997 57999999 11126899999999875 1 21 35799999
Q ss_pred EcC
Q 042171 72 MDA 74 (125)
Q Consensus 72 id~ 74 (125)
.+.
T Consensus 120 ~Nl 122 (295)
T 3gru_A 120 ANL 122 (295)
T ss_dssp EEC
T ss_pred EeC
Confidence 753
No 187
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.50 E-value=2e-07 Score=71.96 Aligned_cols=66 Identities=9% Similarity=0.128 Sum_probs=53.9
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe--------------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeE
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID--------------ARVDHKINFIESEALSVLDQLLKDSENEVNFDY 69 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD--------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~ 69 (125)
+..+|||||||+|..+..++++.| +.+++++| .++.++|+++.+|..+. + ..+||+
T Consensus 202 ~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~---~------p~~~D~ 271 (369)
T 3gwz_A 202 GAATAVDIGGGRGSLMAAVLDAFP-GLRGTLLERPPVAEEARELLTGRGLADRCEILPGDFFET---I------PDGADV 271 (369)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTTC---C------CSSCSE
T ss_pred cCcEEEEeCCCccHHHHHHHHHCC-CCeEEEEcCHHHHHHHHHhhhhcCcCCceEEeccCCCCC---C------CCCceE
Confidence 467999999999999999999987 78999999 46678999999999732 2 237999
Q ss_pred EEEcCCCcCC
Q 042171 70 AFMDADKDNY 79 (125)
Q Consensus 70 v~id~~~~~~ 79 (125)
|++......+
T Consensus 272 v~~~~vlh~~ 281 (369)
T 3gwz_A 272 YLIKHVLHDW 281 (369)
T ss_dssp EEEESCGGGS
T ss_pred EEhhhhhccC
Confidence 9986654433
No 188
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=98.50 E-value=1.3e-07 Score=68.40 Aligned_cols=63 Identities=16% Similarity=0.240 Sum_probs=49.6
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
+..+|||||||+|..+..+++.. .+++++| .++ .+++++.+|+.+. + + ..++||
T Consensus 21 ~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~-~-~-----~~~~fD 89 (239)
T 1xxl_A 21 AEHRVLDIGAGAGHTALAFSPYV---QECIGVDATKEMVEVASSFAQEKGV-ENVRFQQGTAESL-P-F-----PDDSFD 89 (239)
T ss_dssp TTCEEEEESCTTSHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHHTC-CSEEEEECBTTBC-C-S-----CTTCEE
T ss_pred CCCEEEEEccCcCHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHHHcCC-CCeEEEecccccC-C-C-----CCCcEE
Confidence 45799999999999999999874 5899999 233 4799999998753 3 2 247899
Q ss_pred EEEEcCCCc
Q 042171 69 YAFMDADKD 77 (125)
Q Consensus 69 ~v~id~~~~ 77 (125)
+|++.....
T Consensus 90 ~v~~~~~l~ 98 (239)
T 1xxl_A 90 IITCRYAAH 98 (239)
T ss_dssp EEEEESCGG
T ss_pred EEEECCchh
Confidence 999975543
No 189
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=98.50 E-value=1.6e-07 Score=72.01 Aligned_cols=63 Identities=14% Similarity=0.078 Sum_probs=51.8
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
+..+|||+|||+|..++.++...+++.+++++| +++. +++++++|+.+..+. ..+||
T Consensus 203 ~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~-~i~~~~~D~~~~~~~-------~~~~D 274 (354)
T 3tma_A 203 PGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLS-WIRFLRADARHLPRF-------FPEVD 274 (354)
T ss_dssp TTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCT-TCEEEECCGGGGGGT-------CCCCS
T ss_pred CCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCC-ceEEEeCChhhCccc-------cCCCC
Confidence 356899999999999999999873378999999 5675 899999999876322 45699
Q ss_pred EEEEcC
Q 042171 69 YAFMDA 74 (125)
Q Consensus 69 ~v~id~ 74 (125)
+|++|.
T Consensus 275 ~Ii~np 280 (354)
T 3tma_A 275 RILANP 280 (354)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 999864
No 190
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.49 E-value=1.4e-07 Score=74.89 Aligned_cols=66 Identities=17% Similarity=0.184 Sum_probs=52.5
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
...+|||+|||+|..|+.+++.++..++|+++| .++ .+++++.+|+.+..+.+ ..++||
T Consensus 259 ~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~-~~v~~~~~D~~~~~~~~-----~~~~fD 332 (450)
T 2yxl_A 259 PGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGI-KIVKPLVKDARKAPEII-----GEEVAD 332 (450)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTC-CSEEEECSCTTCCSSSS-----CSSCEE
T ss_pred CcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCC-CcEEEEEcChhhcchhh-----ccCCCC
Confidence 346999999999999999999987459999999 355 47999999997652222 126799
Q ss_pred EEEEcCC
Q 042171 69 YAFMDAD 75 (125)
Q Consensus 69 ~v~id~~ 75 (125)
.|++|+.
T Consensus 333 ~Vl~D~P 339 (450)
T 2yxl_A 333 KVLLDAP 339 (450)
T ss_dssp EEEEECC
T ss_pred EEEEcCC
Confidence 9999853
No 191
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=98.49 E-value=2.4e-07 Score=73.72 Aligned_cols=63 Identities=13% Similarity=0.162 Sum_probs=47.9
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe--------C--------------CCC-CcEEEEecchHHH---HHHH
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID--------A--------------RVD-HKINFIESEALSV---LDQL 57 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD--------~--------------~~~-~~i~~~~gd~~~~---l~~~ 57 (125)
+..+|||||||+|+.++.+|+..+ ..+|+++| + ++. .+++++++|.... ++..
T Consensus 242 ~g~~VLDLGCGsG~la~~LA~~~g-~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~~~~~~~ 320 (433)
T 1u2z_A 242 KGDTFMDLGSGVGNCVVQAALECG-CALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNNRVAEL 320 (433)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHC-CSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCHHHHHH
T ss_pred CCCEEEEeCCCcCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCccccccccccc
Confidence 456999999999999999999876 57899999 2 332 6899999865421 2211
Q ss_pred hhcCCCCCceeEEEEc
Q 042171 58 LKDSENEVNFDYAFMD 73 (125)
Q Consensus 58 ~~~~~~~~~fD~v~id 73 (125)
.++||+|++.
T Consensus 321 ------~~~FDvIvvn 330 (433)
T 1u2z_A 321 ------IPQCDVILVN 330 (433)
T ss_dssp ------GGGCSEEEEC
T ss_pred ------cCCCCEEEEe
Confidence 3689999985
No 192
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.49 E-value=2.2e-07 Score=69.70 Aligned_cols=60 Identities=18% Similarity=0.200 Sum_probs=48.1
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
+..+|||||||+|..|..+++. ..+|+++| .+..++++++++|+.+. + ..+||
T Consensus 28 ~~~~VLDiG~G~G~lt~~L~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~-~--------~~~fD 95 (285)
T 1zq9_A 28 PTDVVLEVGPGTGNMTVKLLEK---AKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKT-D--------LPFFD 95 (285)
T ss_dssp TTCEEEEECCTTSTTHHHHHHH---SSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTS-C--------CCCCS
T ss_pred CCCEEEEEcCcccHHHHHHHhh---CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecc-c--------chhhc
Confidence 4568999999999999999997 46899999 22336899999999864 2 24799
Q ss_pred EEEEcCC
Q 042171 69 YAFMDAD 75 (125)
Q Consensus 69 ~v~id~~ 75 (125)
.|+++..
T Consensus 96 ~vv~nlp 102 (285)
T 1zq9_A 96 TCVANLP 102 (285)
T ss_dssp EEEEECC
T ss_pred EEEEecC
Confidence 9998543
No 193
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.49 E-value=2.4e-07 Score=74.36 Aligned_cols=61 Identities=21% Similarity=0.302 Sum_probs=50.2
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe--------------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeE
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID--------------ARVDHKINFIESEALSVLDQLLKDSENEVNFDY 69 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD--------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~ 69 (125)
+..+|||||||+|..++.+++. + ..+|+++| .++.++|+++.+|+.+. + + .++||+
T Consensus 158 ~~~~VLDiGcGtG~la~~la~~-~-~~~V~gvD~s~~l~~A~~~~~~~gl~~~v~~~~~d~~~~-~-~------~~~fD~ 227 (480)
T 3b3j_A 158 KDKIVLDVGCGSGILSFFAAQA-G-ARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEV-S-L------PEQVDI 227 (480)
T ss_dssp TTCEEEEESCSTTHHHHHHHHT-T-CSEEEEEECHHHHHHHHHHHHHTTCTTTEEEEESCTTTC-C-C------SSCEEE
T ss_pred CCCEEEEecCcccHHHHHHHHc-C-CCEEEEEEcHHHHHHHHHHHHHcCCCCcEEEEECchhhC-c-c------CCCeEE
Confidence 4579999999999999999884 4 57999999 46778999999999864 1 2 367999
Q ss_pred EEEcC
Q 042171 70 AFMDA 74 (125)
Q Consensus 70 v~id~ 74 (125)
|+++.
T Consensus 228 Ivs~~ 232 (480)
T 3b3j_A 228 IISEP 232 (480)
T ss_dssp EECCC
T ss_pred EEEeC
Confidence 99854
No 194
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.48 E-value=2.7e-07 Score=70.42 Aligned_cols=66 Identities=14% Similarity=0.197 Sum_probs=52.9
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe--------------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeE
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID--------------ARVDHKINFIESEALSVLDQLLKDSENEVNFDY 69 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD--------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~ 69 (125)
+..+|||||||+|..+..+++..+ +.+++++| .++.++++++.+|..+.+| ..||+
T Consensus 183 ~~~~vLDvG~G~G~~~~~l~~~~~-~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~---------~~~D~ 252 (360)
T 1tw3_A 183 NVRHVLDVGGGKGGFAAAIARRAP-HVSATVLEMAGTVDTARSYLKDEGLSDRVDVVEGDFFEPLP---------RKADA 252 (360)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEECTTHHHHHHHHHHHTTCTTTEEEEECCTTSCCS---------SCEEE
T ss_pred cCcEEEEeCCcCcHHHHHHHHhCC-CCEEEEecCHHHHHHHHHHHHhcCCCCceEEEeCCCCCCCC---------CCccE
Confidence 457999999999999999999987 68999999 3565689999999875322 34999
Q ss_pred EEEcCCCcCC
Q 042171 70 AFMDADKDNY 79 (125)
Q Consensus 70 v~id~~~~~~ 79 (125)
|++....+++
T Consensus 253 v~~~~vl~~~ 262 (360)
T 1tw3_A 253 IILSFVLLNW 262 (360)
T ss_dssp EEEESCGGGS
T ss_pred EEEcccccCC
Confidence 9987654433
No 195
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.47 E-value=1e-07 Score=69.84 Aligned_cols=73 Identities=16% Similarity=0.195 Sum_probs=54.2
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEEEcC
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------ARVDHKINFIESEALSVLDQLLKDSENEVNFDYAFMDA 74 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~id~ 74 (125)
+..+|||||||+|..+..+++.++ +.+++++| .....+++++.+|+.+. + + ..++||+|++..
T Consensus 85 ~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~-~-~-----~~~~fD~v~~~~ 156 (269)
T 1p91_A 85 KATAVLDIGCGEGYYTHAFADALP-EITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRL-P-F-----SDTSMDAIIRIY 156 (269)
T ss_dssp TCCEEEEETCTTSTTHHHHHHTCT-TSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSC-S-B-----CTTCEEEEEEES
T ss_pred CCCEEEEECCCCCHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHhCCCcEEEEcchhhC-C-C-----CCCceeEEEEeC
Confidence 467999999999999999999886 68999999 11125688999998754 3 2 147899999865
Q ss_pred CCcCCHHHHh
Q 042171 75 DKDNYCNYMR 84 (125)
Q Consensus 75 ~~~~~~~~~~ 84 (125)
......++.+
T Consensus 157 ~~~~l~~~~~ 166 (269)
T 1p91_A 157 APCKAEELAR 166 (269)
T ss_dssp CCCCHHHHHH
T ss_pred ChhhHHHHHH
Confidence 5444444433
No 196
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.47 E-value=1.1e-07 Score=71.56 Aligned_cols=63 Identities=13% Similarity=0.062 Sum_probs=53.0
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
+..+|||+|||+|+.++.+|+.- ..+|+++| .++.++++++++|+.+..+ .+.||
T Consensus 125 ~g~~VlD~~aG~G~~~i~~a~~g--~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~--------~~~~D 194 (278)
T 3k6r_A 125 PDELVVDMFAGIGHLSLPIAVYG--KAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG--------ENIAD 194 (278)
T ss_dssp TTCEEEETTCTTTTTTHHHHHHT--CCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC--------CSCEE
T ss_pred CCCEEEEecCcCcHHHHHHHHhc--CCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhcc--------ccCCC
Confidence 45789999999999999999862 46899999 6788899999999987632 57899
Q ss_pred EEEEcCCC
Q 042171 69 YAFMDADK 76 (125)
Q Consensus 69 ~v~id~~~ 76 (125)
.|+++-..
T Consensus 195 ~Vi~~~p~ 202 (278)
T 3k6r_A 195 RILMGYVV 202 (278)
T ss_dssp EEEECCCS
T ss_pred EEEECCCC
Confidence 99997544
No 197
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=98.47 E-value=1.7e-07 Score=73.18 Aligned_cols=60 Identities=15% Similarity=0.271 Sum_probs=48.5
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
+..+|||+|||+|..++.+++. +.+|+++| .++ .++++.+|+.+..+. .++||
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~---g~~V~gvDis~~al~~A~~n~~~~~~--~v~~~~~D~~~~~~~-------~~~fD 300 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARM---GAEVVGVEDDLASVLSLQKGLEANAL--KAQALHSDVDEALTE-------EARFD 300 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHT---TCEEEEEESBHHHHHHHHHHHHHTTC--CCEEEECSTTTTSCT-------TCCEE
T ss_pred CCCEEEEEeeeCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCC--CeEEEEcchhhcccc-------CCCeE
Confidence 4569999999999999999987 57999999 223 489999999876321 37899
Q ss_pred EEEEcCC
Q 042171 69 YAFMDAD 75 (125)
Q Consensus 69 ~v~id~~ 75 (125)
+|+++..
T Consensus 301 ~Ii~npp 307 (381)
T 3dmg_A 301 IIVTNPP 307 (381)
T ss_dssp EEEECCC
T ss_pred EEEECCc
Confidence 9999743
No 198
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.47 E-value=2.2e-07 Score=67.22 Aligned_cols=60 Identities=18% Similarity=0.338 Sum_probs=47.2
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe-------------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEE
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID-------------ARVDHKINFIESEALSVLDQLLKDSENEVNFDYA 70 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD-------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v 70 (125)
++.+|||+|||+|..++.+++. +.+++++| .....+++++.+|+.+. + + .++||+|
T Consensus 41 ~~~~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~-~-~------~~~fD~v 109 (252)
T 1wzn_A 41 EVRRVLDLACGTGIPTLELAER---GYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEI-A-F------KNEFDAV 109 (252)
T ss_dssp CCCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGC-C-C------CSCEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhc-c-c------CCCccEE
Confidence 4579999999999999999986 57999999 11223699999999864 2 1 3679999
Q ss_pred EEcC
Q 042171 71 FMDA 74 (125)
Q Consensus 71 ~id~ 74 (125)
++..
T Consensus 110 ~~~~ 113 (252)
T 1wzn_A 110 TMFF 113 (252)
T ss_dssp EECS
T ss_pred EEcC
Confidence 9753
No 199
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.45 E-value=3.8e-07 Score=71.88 Aligned_cols=64 Identities=17% Similarity=0.176 Sum_probs=51.8
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
+..+|||+|||+|..|+.+++..+ +++|+++| .++ +++++.+|+.+..+.+. .++||
T Consensus 246 ~g~~VLDlgaG~G~~t~~la~~~~-~~~v~a~D~~~~~l~~~~~~~~~~g~--~~~~~~~D~~~~~~~~~-----~~~fD 317 (429)
T 1sqg_A 246 NGEHILDLCAAPGGKTTHILEVAP-EAQVVAVDIDEQRLSRVYDNLKRLGM--KATVKQGDGRYPSQWCG-----EQQFD 317 (429)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHCT-TCEEEEEESSTTTHHHHHHHHHHTTC--CCEEEECCTTCTHHHHT-----TCCEE
T ss_pred CcCeEEEECCCchHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHHHHHcCC--CeEEEeCchhhchhhcc-----cCCCC
Confidence 346999999999999999999987 59999999 233 47899999987644341 36899
Q ss_pred EEEEcCC
Q 042171 69 YAFMDAD 75 (125)
Q Consensus 69 ~v~id~~ 75 (125)
.|++|+.
T Consensus 318 ~Vl~D~P 324 (429)
T 1sqg_A 318 RILLDAP 324 (429)
T ss_dssp EEEEECC
T ss_pred EEEEeCC
Confidence 9999864
No 200
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.45 E-value=1.7e-07 Score=66.50 Aligned_cols=62 Identities=19% Similarity=0.300 Sum_probs=48.3
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe-------------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEE
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID-------------ARVDHKINFIESEALSVLDQLLKDSENEVNFDYA 70 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD-------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v 70 (125)
...+|||||||+|..+..+++..+ +++++| .....+++++.+|+.+. + + ..++||+|
T Consensus 38 ~~~~vLDlG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~-~-~-----~~~~~D~v 107 (227)
T 1ve3_A 38 KRGKVLDLACGVGGFSFLLEDYGF---EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKL-S-F-----EDKTFDYV 107 (227)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSC-C-S-----CTTCEEEE
T ss_pred CCCeEEEEeccCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcC-C-C-----CCCcEEEE
Confidence 357999999999999999998743 899999 11126799999998764 2 2 14689999
Q ss_pred EEcCC
Q 042171 71 FMDAD 75 (125)
Q Consensus 71 ~id~~ 75 (125)
++...
T Consensus 108 ~~~~~ 112 (227)
T 1ve3_A 108 IFIDS 112 (227)
T ss_dssp EEESC
T ss_pred EEcCc
Confidence 98755
No 201
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.45 E-value=3.9e-07 Score=70.70 Aligned_cols=62 Identities=11% Similarity=-0.027 Sum_probs=50.2
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe-----CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEEEc
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID-----ARVDHKINFIESEALSVLDQLLKDSENEVNFDYAFMD 73 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD-----~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~id 73 (125)
+..+|||+|||+|..++.+++..+...+++++| ..+..+++++++|..+..+ .++||+|+++
T Consensus 39 ~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a~~~~~~~~D~~~~~~--------~~~fD~Ii~N 105 (421)
T 2ih2_A 39 RGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLPPWAEGILADFLLWEP--------GEAFDLILGN 105 (421)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCCTTEEEEESCGGGCCC--------SSCEEEEEEC
T ss_pred CCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhCCCCcEEeCChhhcCc--------cCCCCEEEEC
Confidence 356999999999999999999874468999999 2333689999999986521 4689999985
No 202
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=98.45 E-value=3e-07 Score=67.73 Aligned_cols=65 Identities=14% Similarity=0.138 Sum_probs=50.6
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
+..+|||||||+|..+..+++. + ..+++++| .++..+++++.+|+.+. + +. ..++||
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~-~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~-~~----~~~~fD 135 (298)
T 1ri5_A 64 RGDSVLDLGCGKGGDLLKYERA-G-IGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGR-H-MD----LGKEFD 135 (298)
T ss_dssp TTCEEEEETCTTTTTHHHHHHH-T-CSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTS-C-CC----CSSCEE
T ss_pred CCCeEEEECCCCCHHHHHHHHC-C-CCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCcccc-c-cC----CCCCcC
Confidence 5679999999999999998886 3 46999999 34446899999999865 2 10 147899
Q ss_pred EEEEcCCC
Q 042171 69 YAFMDADK 76 (125)
Q Consensus 69 ~v~id~~~ 76 (125)
+|++....
T Consensus 136 ~v~~~~~l 143 (298)
T 1ri5_A 136 VISSQFSF 143 (298)
T ss_dssp EEEEESCG
T ss_pred EEEECchh
Confidence 99987653
No 203
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=98.45 E-value=1.3e-07 Score=66.90 Aligned_cols=64 Identities=17% Similarity=0.229 Sum_probs=50.5
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe----------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEEEc
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID----------ARVDHKINFIESEALSVLDQLLKDSENEVNFDYAFMD 73 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD----------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~id 73 (125)
+..+|||||||+|..+..+++. +.+++++| .....+++++.+|+.+. + + .++||+|++.
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~~-~-~------~~~fD~v~~~ 113 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLA---GRTVYGIEPSREMRMIAKEKLPKEFSITEGDFLSF-E-V------PTSIDTIVST 113 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHT---TCEEEEECSCHHHHHHHHHHSCTTCCEESCCSSSC-C-C------CSCCSEEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHhC---CCeEEEEeCCHHHHHHHHHhCCCceEEEeCChhhc-C-C------CCCeEEEEEC
Confidence 4679999999999999999987 57999999 11225799999999865 2 1 3789999997
Q ss_pred CCCcC
Q 042171 74 ADKDN 78 (125)
Q Consensus 74 ~~~~~ 78 (125)
.....
T Consensus 114 ~~l~~ 118 (220)
T 3hnr_A 114 YAFHH 118 (220)
T ss_dssp SCGGG
T ss_pred cchhc
Confidence 65443
No 204
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=98.44 E-value=1.3e-07 Score=70.44 Aligned_cols=59 Identities=14% Similarity=0.192 Sum_probs=47.3
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe-------------CCCC----CcEEEEecchHHHHHHHhhcCCCCCc
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID-------------ARVD----HKINFIESEALSVLDQLLKDSENEVN 66 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD-------------~~~~----~~i~~~~gd~~~~l~~~~~~~~~~~~ 66 (125)
++.+|||||||+|..+..+++. +.+|+++| .... .+++++.+|+.+. + + .++
T Consensus 82 ~~~~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~-~-~------~~~ 150 (299)
T 3g2m_A 82 VSGPVLELAAGMGRLTFPFLDL---GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAF-A-L------DKR 150 (299)
T ss_dssp CCSCEEEETCTTTTTHHHHHTT---TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBC-C-C------SCC
T ss_pred CCCcEEEEeccCCHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcC-C-c------CCC
Confidence 4569999999999999999987 57899999 1111 6799999999874 2 1 478
Q ss_pred eeEEEEc
Q 042171 67 FDYAFMD 73 (125)
Q Consensus 67 fD~v~id 73 (125)
||+|++.
T Consensus 151 fD~v~~~ 157 (299)
T 3g2m_A 151 FGTVVIS 157 (299)
T ss_dssp EEEEEEC
T ss_pred cCEEEEC
Confidence 9999964
No 205
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.44 E-value=1.6e-07 Score=72.74 Aligned_cols=63 Identities=16% Similarity=0.150 Sum_probs=50.5
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
++.+|||+| |+|..++.+++..+ .++|+++| .++. +++++.+|+.+.+|.. ..++||
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~-~~~v~~vDi~~~~l~~a~~~~~~~g~~-~v~~~~~D~~~~l~~~-----~~~~fD 243 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGL-PKRIAVLDIDERLTKFIEKAANEIGYE-DIEIFTFDLRKPLPDY-----ALHKFD 243 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTC-CSEEEEECSCHHHHHHHHHHHHHHTCC-CEEEECCCTTSCCCTT-----TSSCBS
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCC-CEEEEEChhhhhchhh-----ccCCcc
Confidence 467999999 99999999998754 58999999 3564 8999999998744421 035899
Q ss_pred EEEEcC
Q 042171 69 YAFMDA 74 (125)
Q Consensus 69 ~v~id~ 74 (125)
+|++|.
T Consensus 244 ~Vi~~~ 249 (373)
T 2qm3_A 244 TFITDP 249 (373)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 999985
No 206
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.44 E-value=4.7e-07 Score=64.78 Aligned_cols=64 Identities=16% Similarity=0.195 Sum_probs=49.1
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe----------CC-CCCcEEEEecchHHHHHHHhhcCCCCCceeEEEE
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID----------AR-VDHKINFIESEALSVLDQLLKDSENEVNFDYAFM 72 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD----------~~-~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~i 72 (125)
+..+|||||||+|..+..+++. + ..+++++| .. ...+++++.+|+.+. + + ..++||+|++
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~-~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~-~-~-----~~~~fD~v~~ 113 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAHEH-G-ASYVLGLDLSEKMLARARAAGPDTGITYERADLDKL-H-L-----PQDSFDLAYS 113 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT-T-CSEEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGC-C-C-----CTTCEEEEEE
T ss_pred CCCEEEEEcCcCCHHHHHHHHC-C-CCeEEEEcCCHHHHHHHHHhcccCCceEEEcChhhc-c-C-----CCCCceEEEE
Confidence 4679999999999999999987 2 24999999 11 124799999999764 2 2 1478999998
Q ss_pred cCCC
Q 042171 73 DADK 76 (125)
Q Consensus 73 d~~~ 76 (125)
....
T Consensus 114 ~~~l 117 (243)
T 3bkw_A 114 SLAL 117 (243)
T ss_dssp ESCG
T ss_pred eccc
Confidence 7553
No 207
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=98.44 E-value=3e-07 Score=66.32 Aligned_cols=67 Identities=9% Similarity=-0.000 Sum_probs=51.2
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe------------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEE
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID------------ARVDHKINFIESEALSVLDQLLKDSENEVNFDYAF 71 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~ 71 (125)
+..+|||||||+|..+..+++.. ..+++++| ..-..+++++.+|+.+. + + ..++||+|+
T Consensus 93 ~~~~vLDiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~-~-~-----~~~~fD~v~ 163 (254)
T 1xtp_A 93 GTSRALDCGAGIGRITKNLLTKL--YATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETA-T-L-----PPNTYDLIV 163 (254)
T ss_dssp CCSEEEEETCTTTHHHHHTHHHH--CSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGC-C-C-----CSSCEEEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHhh--cCEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHC-C-C-----CCCCeEEEE
Confidence 46799999999999999999875 46899999 11116899999999764 3 2 247899999
Q ss_pred EcCCCcCC
Q 042171 72 MDADKDNY 79 (125)
Q Consensus 72 id~~~~~~ 79 (125)
+.......
T Consensus 164 ~~~~l~~~ 171 (254)
T 1xtp_A 164 IQWTAIYL 171 (254)
T ss_dssp EESCGGGS
T ss_pred EcchhhhC
Confidence 87654433
No 208
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=98.44 E-value=2.4e-07 Score=68.29 Aligned_cols=61 Identities=16% Similarity=0.163 Sum_probs=49.1
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe----------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEEEc
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID----------ARVDHKINFIESEALSVLDQLLKDSENEVNFDYAFMD 73 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD----------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~id 73 (125)
+..+|||||||+|..+..+++ + +++|+++| ... .+++++.+|+.+. + + .++||+|++.
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~--~-~~~v~gvD~s~~~~~~a~~~~-~~~~~~~~d~~~~-~-~------~~~fD~v~~~ 124 (279)
T 3ccf_A 57 PGEFILDLGCGTGQLTEKIAQ--S-GAEVLGTDNAATMIEKARQNY-PHLHFDVADARNF-R-V------DKPLDAVFSN 124 (279)
T ss_dssp TTCEEEEETCTTSHHHHHHHH--T-TCEEEEEESCHHHHHHHHHHC-TTSCEEECCTTTC-C-C------SSCEEEEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHh--C-CCeEEEEECCHHHHHHHHhhC-CCCEEEECChhhC-C-c------CCCcCEEEEc
Confidence 457999999999999999998 3 78999999 112 5789999999764 3 2 4789999987
Q ss_pred CCC
Q 042171 74 ADK 76 (125)
Q Consensus 74 ~~~ 76 (125)
...
T Consensus 125 ~~l 127 (279)
T 3ccf_A 125 AML 127 (279)
T ss_dssp SCG
T ss_pred chh
Confidence 654
No 209
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.42 E-value=3e-07 Score=64.87 Aligned_cols=75 Identities=11% Similarity=0.122 Sum_probs=52.5
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe--------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEEEcCC
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID--------ARVDHKINFIESEALSVLDQLLKDSENEVNFDYAFMDAD 75 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD--------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~id~~ 75 (125)
++.+|||||||+|..+..+++. +.+++++| +.-..+++++.++..+...... ....+||+|++...
T Consensus 52 ~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~---~~~~~fD~v~~~~~ 125 (227)
T 3e8s_A 52 QPERVLDLGCGEGWLLRALADR---GIEAVGVDGDRTLVDAARAAGAGEVHLASYAQLAEAKV---PVGKDYDLICANFA 125 (227)
T ss_dssp CCSEEEEETCTTCHHHHHHHTT---TCEEEEEESCHHHHHHHHHTCSSCEEECCHHHHHTTCS---CCCCCEEEEEEESC
T ss_pred CCCEEEEeCCCCCHHHHHHHHC---CCEEEEEcCCHHHHHHHHHhcccccchhhHHhhccccc---ccCCCccEEEECch
Confidence 5689999999999999999987 57999999 1111567889999877621110 12456999999755
Q ss_pred C--cCCHHHHh
Q 042171 76 K--DNYCNYMR 84 (125)
Q Consensus 76 ~--~~~~~~~~ 84 (125)
. .....+++
T Consensus 126 l~~~~~~~~l~ 136 (227)
T 3e8s_A 126 LLHQDIIELLS 136 (227)
T ss_dssp CCSSCCHHHHH
T ss_pred hhhhhHHHHHH
Confidence 3 23344544
No 210
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.42 E-value=4.4e-07 Score=68.36 Aligned_cols=67 Identities=19% Similarity=0.283 Sum_probs=53.2
Q ss_pred CCCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe--------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 3 LKLKKTIEIGVFTGYSLFLTALTIPEDGQITAID--------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 3 ~~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD--------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
.+..+|||||||+|..+..+++..| +.+++++| .++.++++++.+|..+. + + ...||
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~-~------~~~~D 234 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNP-NAEIFGVDWASVLEVAKENARIQGVASRYHTIAGSAFEV-D-Y------GNDYD 234 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCT-TCEEEEEECHHHHHHHHHHHHHHTCGGGEEEEESCTTTS-C-C------CSCEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCC-CCeEEEEecHHHHHHHHHHHHhcCCCcceEEEecccccC-C-C------CCCCc
Confidence 3567999999999999999999987 68999999 34566899999998764 2 2 23499
Q ss_pred EEEEcCCCcC
Q 042171 69 YAFMDADKDN 78 (125)
Q Consensus 69 ~v~id~~~~~ 78 (125)
+|++......
T Consensus 235 ~v~~~~~l~~ 244 (335)
T 2r3s_A 235 LVLLPNFLHH 244 (335)
T ss_dssp EEEEESCGGG
T ss_pred EEEEcchhcc
Confidence 9998554433
No 211
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.40 E-value=2e-07 Score=70.50 Aligned_cols=64 Identities=11% Similarity=0.141 Sum_probs=52.0
Q ss_pred CEEEEEcCcccHHHHHHHhhCCCCCEEEEEe--------------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEE
Q 042171 6 KKTIEIGVFTGYSLFLTALTIPEDGQITAID--------------ARVDHKINFIESEALSVLDQLLKDSENEVNFDYAF 71 (125)
Q Consensus 6 ~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD--------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~ 71 (125)
.+|||||||+|..+..+++..| +.+++++| .++.++++++.+|..+. + ..+||+|+
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~------~~~~D~v~ 238 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEP-SARGVMLDREGSLGVARDNLSSLLAGERVSLVGGDMLQE---V------PSNGDIYL 238 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCT-TCEEEEEECTTCTHHHHHHTHHHHHTTSEEEEESCTTTC---C------CSSCSEEE
T ss_pred CEEEEeCCCchHHHHHHHHHCC-CCEEEEeCcHHHHHHHHHHHhhcCCCCcEEEecCCCCCC---C------CCCCCEEE
Confidence 7999999999999999999987 68999999 12346899999998762 2 25699999
Q ss_pred EcCCCcCC
Q 042171 72 MDADKDNY 79 (125)
Q Consensus 72 id~~~~~~ 79 (125)
+....+++
T Consensus 239 ~~~vl~~~ 246 (334)
T 2ip2_A 239 LSRIIGDL 246 (334)
T ss_dssp EESCGGGC
T ss_pred EchhccCC
Confidence 87665443
No 212
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=98.39 E-value=5.1e-07 Score=65.41 Aligned_cols=62 Identities=16% Similarity=0.108 Sum_probs=47.9
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe-C------------------CCCCcEEEEecchHHHHHHHhhcCCCC
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID-A------------------RVDHKINFIESEALSVLDQLLKDSENE 64 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD-~------------------~~~~~i~~~~gd~~~~l~~~~~~~~~~ 64 (125)
+..+|||||||+|..++.+++..+ +.+|+++| + ++ .+++++.+|+.+. |.. ..
T Consensus 24 ~~~~vLDiGCG~G~~~~~la~~~~-~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~-~~v~~~~~d~~~l-~~~-----~~ 95 (225)
T 3p2e_A 24 FDRVHIDLGTGDGRNIYKLAINDQ-NTFYIGIDPVKENLFDISKKIIKKPSKGGL-SNVVFVIAAAESL-PFE-----LK 95 (225)
T ss_dssp CSEEEEEETCTTSHHHHHHHHTCT-TEEEEEECSCCGGGHHHHHHHTSCGGGTCC-SSEEEECCBTTBC-CGG-----GT
T ss_pred CCCEEEEEeccCcHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHHHHHcCC-CCeEEEEcCHHHh-hhh-----cc
Confidence 456899999999999999998765 78999999 2 12 4799999999876 321 02
Q ss_pred CceeEEEEc
Q 042171 65 VNFDYAFMD 73 (125)
Q Consensus 65 ~~fD~v~id 73 (125)
..+|.|++.
T Consensus 96 d~v~~i~~~ 104 (225)
T 3p2e_A 96 NIADSISIL 104 (225)
T ss_dssp TCEEEEEEE
T ss_pred CeEEEEEEe
Confidence 568888774
No 213
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=98.39 E-value=3.5e-07 Score=64.10 Aligned_cols=61 Identities=11% Similarity=0.120 Sum_probs=47.4
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe------------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEE
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID------------ARVDHKINFIESEALSVLDQLLKDSENEVNFDYAF 71 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~ 71 (125)
+..+|||||||+|..+..+++..+ .+++++| ..-..+++++.+|+.+. + + ..++||+|+
T Consensus 42 ~~~~vLdiGcG~G~~~~~l~~~~~--~~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~-~-~-----~~~~fD~v~ 112 (215)
T 2pxx_A 42 PEDRILVLGCGNSALSYELFLGGF--PNVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKL-D-F-----PSASFDVVL 112 (215)
T ss_dssp TTCCEEEETCTTCSHHHHHHHTTC--CCEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSC-C-S-----CSSCEEEEE
T ss_pred CCCeEEEECCCCcHHHHHHHHcCC--CcEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcC-C-C-----CCCcccEEE
Confidence 456999999999999999998743 3899999 11125799999998764 2 2 247899999
Q ss_pred Ec
Q 042171 72 MD 73 (125)
Q Consensus 72 id 73 (125)
+.
T Consensus 113 ~~ 114 (215)
T 2pxx_A 113 EK 114 (215)
T ss_dssp EE
T ss_pred EC
Confidence 74
No 214
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.39 E-value=6.2e-07 Score=68.64 Aligned_cols=57 Identities=23% Similarity=0.141 Sum_probs=48.3
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
+..+|||+|||+|..++. |+ + ..+|+++| .++.++++++.+|+.+.+ .+||
T Consensus 195 ~~~~VLDlg~G~G~~~l~-a~--~-~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~----------~~fD 260 (336)
T 2yx1_A 195 LNDVVVDMFAGVGPFSIA-CK--N-AKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD----------VKGN 260 (336)
T ss_dssp TTCEEEETTCTTSHHHHH-TT--T-SSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC----------CCEE
T ss_pred CCCEEEEccCccCHHHHh-cc--C-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc----------CCCc
Confidence 457999999999999999 77 3 68999999 456678999999998652 5699
Q ss_pred EEEEcC
Q 042171 69 YAFMDA 74 (125)
Q Consensus 69 ~v~id~ 74 (125)
+|++|.
T Consensus 261 ~Vi~dp 266 (336)
T 2yx1_A 261 RVIMNL 266 (336)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 999974
No 215
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.39 E-value=2.9e-07 Score=68.33 Aligned_cols=61 Identities=13% Similarity=0.147 Sum_probs=45.4
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe------------CCCCCcEEEEecchHHH-HHHHhhcCCCCCceeEE
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID------------ARVDHKINFIESEALSV-LDQLLKDSENEVNFDYA 70 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD------------~~~~~~i~~~~gd~~~~-l~~~~~~~~~~~~fD~v 70 (125)
+..+|||||||+|..|..+++. .++|+++| ..-.++++++++|+.+. ++.+. ...+|| |
T Consensus 29 ~~~~VLEIG~G~G~lt~~La~~---~~~V~avEid~~~~~~~~~~~~~~~~v~~i~~D~~~~~~~~~~----~~~~~~-v 100 (255)
T 3tqs_A 29 KTDTLVEIGPGRGALTDYLLTE---CDNLALVEIDRDLVAFLQKKYNQQKNITIYQNDALQFDFSSVK----TDKPLR-V 100 (255)
T ss_dssp TTCEEEEECCTTTTTHHHHTTT---SSEEEEEECCHHHHHHHHHHHTTCTTEEEEESCTTTCCGGGSC----CSSCEE-E
T ss_pred CcCEEEEEcccccHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHhhCCCcEEEEcchHhCCHHHhc----cCCCeE-E
Confidence 3568999999999999999986 47999999 11136899999999876 22221 135788 4
Q ss_pred EE
Q 042171 71 FM 72 (125)
Q Consensus 71 ~i 72 (125)
+.
T Consensus 101 v~ 102 (255)
T 3tqs_A 101 VG 102 (255)
T ss_dssp EE
T ss_pred Ee
Confidence 43
No 216
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=98.38 E-value=5.1e-08 Score=71.08 Aligned_cols=32 Identities=22% Similarity=0.081 Sum_probs=28.1
Q ss_pred CCCEEEEEcCcccHHHHHHHhh--CCCCCEEEEEe
Q 042171 4 KLKKTIEIGVFTGYSLFLTALT--IPEDGQITAID 36 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~--~~~~~~v~~iD 36 (125)
++.+|||+|||+|..++.+++. .+ ..+|+++|
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~-~~~v~gvD 84 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRS-LRQVIASD 84 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGG-EEEEEEEE
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccC-CCeEEEEE
Confidence 4569999999999999999998 44 57999999
No 217
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=98.37 E-value=2e-07 Score=68.04 Aligned_cols=59 Identities=14% Similarity=0.083 Sum_probs=47.7
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe----------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEEEc
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID----------ARVDHKINFIESEALSVLDQLLKDSENEVNFDYAFMD 73 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD----------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~id 73 (125)
++.+|||||||+|..+..+++. ..+|+++| ... .+++++.+|+.+. +. .++||+|++.
T Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~-~~~~~~~~d~~~~-~~-------~~~fD~v~~~ 117 (263)
T 3pfg_A 50 KAASLLDVACGTGMHLRHLADS---FGTVEGLELSADMLAIARRRN-PDAVLHHGDMRDF-SL-------GRRFSAVTCM 117 (263)
T ss_dssp TCCEEEEETCTTSHHHHHHTTT---SSEEEEEESCHHHHHHHHHHC-TTSEEEECCTTTC-CC-------SCCEEEEEEC
T ss_pred CCCcEEEeCCcCCHHHHHHHHc---CCeEEEEECCHHHHHHHHhhC-CCCEEEECChHHC-Cc-------cCCcCEEEEc
Confidence 4579999999999999999886 46899999 112 3799999999864 21 4789999986
Q ss_pred C
Q 042171 74 A 74 (125)
Q Consensus 74 ~ 74 (125)
.
T Consensus 118 ~ 118 (263)
T 3pfg_A 118 F 118 (263)
T ss_dssp T
T ss_pred C
Confidence 5
No 218
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.37 E-value=2.5e-07 Score=69.86 Aligned_cols=59 Identities=19% Similarity=0.185 Sum_probs=44.0
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
+..+|||||||+|..|..+++. .++|+++| .++ ++++++.+|+.+. + ..+||
T Consensus 42 ~~~~VLDiG~G~G~lt~~La~~---~~~v~~vDi~~~~~~~a~~~~~~~~~-~~v~~~~~D~~~~-~--------~~~~D 108 (299)
T 2h1r_A 42 SSDIVLEIGCGTGNLTVKLLPL---AKKVITIDIDSRMISEVKKRCLYEGY-NNLEVYEGDAIKT-V--------FPKFD 108 (299)
T ss_dssp TTCEEEEECCTTSTTHHHHTTT---SSEEEEECSCHHHHHHHHHHHHHTTC-CCEEC----CCSS-C--------CCCCS
T ss_pred CcCEEEEEcCcCcHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHcCC-CceEEEECchhhC-C--------cccCC
Confidence 4569999999999999999986 57999999 234 6899999998754 2 25799
Q ss_pred EEEEcCC
Q 042171 69 YAFMDAD 75 (125)
Q Consensus 69 ~v~id~~ 75 (125)
.|+++..
T Consensus 109 ~Vv~n~p 115 (299)
T 2h1r_A 109 VCTANIP 115 (299)
T ss_dssp EEEEECC
T ss_pred EEEEcCC
Confidence 9998654
No 219
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.36 E-value=6.3e-07 Score=68.47 Aligned_cols=65 Identities=17% Similarity=0.145 Sum_probs=52.1
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe------------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEE
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID------------ARVDHKINFIESEALSVLDQLLKDSENEVNFDYAF 71 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~ 71 (125)
+..+|||||||+|..+..++++.| +.+++++| .++.++|+++.+|..+. + . +||+|+
T Consensus 184 ~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~~~~~~~~~~~~~~~~~~v~~~~~d~~~~---~------p-~~D~v~ 252 (348)
T 3lst_A 184 ATGTVADVGGGRGGFLLTVLREHP-GLQGVLLDRAEVVARHRLDAPDVAGRWKVVEGDFLRE---V------P-HADVHV 252 (348)
T ss_dssp SSEEEEEETCTTSHHHHHHHHHCT-TEEEEEEECHHHHTTCCCCCGGGTTSEEEEECCTTTC---C------C-CCSEEE
T ss_pred CCceEEEECCccCHHHHHHHHHCC-CCEEEEecCHHHhhcccccccCCCCCeEEEecCCCCC---C------C-CCcEEE
Confidence 456999999999999999999998 78999999 23456899999999622 2 3 799999
Q ss_pred EcCCCcCC
Q 042171 72 MDADKDNY 79 (125)
Q Consensus 72 id~~~~~~ 79 (125)
+....+.+
T Consensus 253 ~~~vlh~~ 260 (348)
T 3lst_A 253 LKRILHNW 260 (348)
T ss_dssp EESCGGGS
T ss_pred EehhccCC
Confidence 86654433
No 220
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.36 E-value=6.1e-07 Score=68.12 Aligned_cols=59 Identities=8% Similarity=0.130 Sum_probs=46.3
Q ss_pred CCEEEEEcCcccHHHHHHHhhCCCCCEEEEEeC-----C--C-----C----CcEEEEec-chHHHHHHHhhcCCCCCce
Q 042171 5 LKKTIEIGVFTGYSLFLTALTIPEDGQITAIDA-----R--V-----D----HKINFIES-EALSVLDQLLKDSENEVNF 67 (125)
Q Consensus 5 ~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD~-----~--~-----~----~~i~~~~g-d~~~~l~~~~~~~~~~~~f 67 (125)
..+|||+|||+|.++..+++. ++|+++|. . + . ++++++++ |+.+. + ..+|
T Consensus 83 g~~VLDlGcG~G~~s~~la~~----~~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~~D~~~l-~--------~~~f 149 (305)
T 2p41_A 83 EGKVVDLGCGRGGWSYYCGGL----KNVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSGVDVFFI-P--------PERC 149 (305)
T ss_dssp CEEEEEETCTTSHHHHHHHTS----TTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCTTTS-C--------CCCC
T ss_pred CCEEEEEcCCCCHHHHHHHhc----CCEEEEeccccCchhHHHHHHhhhcCCCCeEEEeccccccC-C--------cCCC
Confidence 469999999999999999987 57999982 1 1 1 46899998 77643 2 3689
Q ss_pred eEEEEcCCC
Q 042171 68 DYAFMDADK 76 (125)
Q Consensus 68 D~v~id~~~ 76 (125)
|+|++|...
T Consensus 150 D~V~sd~~~ 158 (305)
T 2p41_A 150 DTLLCDIGE 158 (305)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCcc
Confidence 999999775
No 221
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.35 E-value=9.9e-07 Score=67.49 Aligned_cols=66 Identities=15% Similarity=0.072 Sum_probs=53.1
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe--------------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeE
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID--------------ARVDHKINFIESEALSVLDQLLKDSENEVNFDY 69 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD--------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~ 69 (125)
+..+|||||||+|..+..+++..| +.+++++| .++.++++++.+|..+. + + ..+|+
T Consensus 190 ~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~-~-------~~~D~ 259 (359)
T 1x19_A 190 GVKKMIDVGGGIGDISAAMLKHFP-ELDSTILNLPGAIDLVNENAAEKGVADRMRGIAVDIYKE-S-Y-------PEADA 259 (359)
T ss_dssp TCCEEEEESCTTCHHHHHHHHHCT-TCEEEEEECGGGHHHHHHHHHHTTCTTTEEEEECCTTTS-C-C-------CCCSE
T ss_pred CCCEEEEECCcccHHHHHHHHHCC-CCeEEEEecHHHHHHHHHHHHhcCCCCCEEEEeCccccC-C-C-------CCCCE
Confidence 457999999999999999999987 78999999 35667899999999765 2 2 23499
Q ss_pred EEEcCCCcCC
Q 042171 70 AFMDADKDNY 79 (125)
Q Consensus 70 v~id~~~~~~ 79 (125)
|++......+
T Consensus 260 v~~~~vlh~~ 269 (359)
T 1x19_A 260 VLFCRILYSA 269 (359)
T ss_dssp EEEESCGGGS
T ss_pred EEEechhccC
Confidence 9986654443
No 222
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=98.35 E-value=1e-06 Score=65.66 Aligned_cols=30 Identities=17% Similarity=0.117 Sum_probs=27.0
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID 36 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD 36 (125)
+..+|||||||+|..++.+++. +.+|+++|
T Consensus 45 ~g~~VLDlGcGtG~~a~~La~~---g~~V~gvD 74 (261)
T 3iv6_A 45 PGSTVAVIGASTRFLIEKALER---GASVTVFD 74 (261)
T ss_dssp TTCEEEEECTTCHHHHHHHHHT---TCEEEEEE
T ss_pred CcCEEEEEeCcchHHHHHHHhc---CCEEEEEE
Confidence 3569999999999999999986 57999999
No 223
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=98.34 E-value=3.2e-07 Score=67.81 Aligned_cols=63 Identities=17% Similarity=0.147 Sum_probs=48.0
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe--------C-------CC---CCcEEEEecchHHHHHHHhhcCCCCC
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID--------A-------RV---DHKINFIESEALSVLDQLLKDSENEV 65 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD--------~-------~~---~~~i~~~~gd~~~~l~~~~~~~~~~~ 65 (125)
++.+|||||||+|..+..+++. +.+|+++| + +. ..++.+..+|+.+....+. ..+
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~----~~~ 129 (293)
T 3thr_A 57 GCHRVLDVACGTGVDSIMLVEE---GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVP----AGD 129 (293)
T ss_dssp TCCEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSC----CTT
T ss_pred CCCEEEEecCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccc----cCC
Confidence 4579999999999999999987 46999999 1 11 1468899999987632210 157
Q ss_pred ceeEEEEc
Q 042171 66 NFDYAFMD 73 (125)
Q Consensus 66 ~fD~v~id 73 (125)
+||+|++.
T Consensus 130 ~fD~V~~~ 137 (293)
T 3thr_A 130 GFDAVICL 137 (293)
T ss_dssp CEEEEEEC
T ss_pred CeEEEEEc
Confidence 89999985
No 224
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.34 E-value=3.4e-07 Score=63.02 Aligned_cols=61 Identities=11% Similarity=0.100 Sum_probs=47.8
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEEEcC
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------ARVDHKINFIESEALSVLDQLLKDSENEVNFDYAFMDA 74 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~id~ 74 (125)
+..+|||||||+|..+..+++. +.+++++| .....+++++.+|+.+. + + +.++||+|++..
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~~-~-~-----~~~~~D~i~~~~ 115 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLSKQ---GHDVLGTDLDPILIDYAKQDFPEARWVVGDLSVD-Q-I-----SETDFDLIVSAG 115 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHCTTSEEEECCTTTS-C-C-----CCCCEEEEEECC
T ss_pred CCCeEEEECCCCCHHHHHHHHC---CCcEEEEcCCHHHHHHHHHhCCCCcEEEcccccC-C-C-----CCCceeEEEECC
Confidence 5679999999999999999987 57999999 11124689999998764 2 2 147899999963
No 225
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.32 E-value=4.6e-07 Score=63.42 Aligned_cols=60 Identities=17% Similarity=0.098 Sum_probs=46.2
Q ss_pred CCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe-------------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEE
Q 042171 5 LKKTIEIGVFTGYSLFLTALTIPEDGQITAID-------------ARVDHKINFIESEALSVLDQLLKDSENEVNFDYAF 71 (125)
Q Consensus 5 ~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD-------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~ 71 (125)
+.+|||||||+|..+..+++. +.+++++| .....+++++.+|+.+. + + +.++||+|+
T Consensus 30 ~~~vLdiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~-~-~-----~~~~fD~v~ 99 (202)
T 2kw5_A 30 QGKILCLAEGEGRNACFLASL---GYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADF-D-I-----VADAWEGIV 99 (202)
T ss_dssp SSEEEECCCSCTHHHHHHHTT---TCEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTB-S-C-----CTTTCSEEE
T ss_pred CCCEEEECCCCCHhHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhc-C-C-----CcCCccEEE
Confidence 349999999999999999986 57999999 00112799999998765 2 2 147899999
Q ss_pred EcC
Q 042171 72 MDA 74 (125)
Q Consensus 72 id~ 74 (125)
+..
T Consensus 100 ~~~ 102 (202)
T 2kw5_A 100 SIF 102 (202)
T ss_dssp EEC
T ss_pred EEh
Confidence 853
No 226
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.32 E-value=8.3e-07 Score=63.93 Aligned_cols=68 Identities=12% Similarity=0.138 Sum_probs=50.2
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe------------CCCCCcEEEEecchHHHHHH--HhhcCCCCCceeE
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID------------ARVDHKINFIESEALSVLDQ--LLKDSENEVNFDY 69 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD------------~~~~~~i~~~~gd~~~~l~~--~~~~~~~~~~fD~ 69 (125)
+..+|||||||+|..+..+++..+ +|+++| .. ..+++++++|+.+.... +.. ..+||+
T Consensus 56 ~~~~vLD~GcG~G~~~~~la~~~~---~v~gvD~s~~~~~~a~~~~~-~~~~~~~~~d~~~~~~~~~~~~----~~~~d~ 127 (245)
T 3ggd_A 56 PELPLIDFACGNGTQTKFLSQFFP---RVIGLDVSKSALEIAAKENT-AANISYRLLDGLVPEQAAQIHS----EIGDAN 127 (245)
T ss_dssp TTSCEEEETCTTSHHHHHHHHHSS---CEEEEESCHHHHHHHHHHSC-CTTEEEEECCTTCHHHHHHHHH----HHCSCE
T ss_pred CCCeEEEEcCCCCHHHHHHHHhCC---CEEEEECCHHHHHHHHHhCc-ccCceEEECccccccccccccc----ccCccE
Confidence 346899999999999999999854 799999 22 24899999999875221 110 235999
Q ss_pred EEEcCCCcCC
Q 042171 70 AFMDADKDNY 79 (125)
Q Consensus 70 v~id~~~~~~ 79 (125)
|++.......
T Consensus 128 v~~~~~~~~~ 137 (245)
T 3ggd_A 128 IYMRTGFHHI 137 (245)
T ss_dssp EEEESSSTTS
T ss_pred EEEcchhhcC
Confidence 9997665433
No 227
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=98.30 E-value=1.2e-06 Score=69.62 Aligned_cols=65 Identities=12% Similarity=0.100 Sum_probs=49.3
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe--------C--------------CC-CCcEEEEecchHHHHHHHhhc
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID--------A--------------RV-DHKINFIESEALSVLDQLLKD 60 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD--------~--------------~~-~~~i~~~~gd~~~~l~~~~~~ 60 (125)
+..+|||||||+|..++.+|+..+ ..++++|| + ++ ..+|++++||+.+. +.. ..
T Consensus 173 ~gd~VLDLGCGtG~l~l~lA~~~g-~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~l-p~~-d~ 249 (438)
T 3uwp_A 173 DDDLFVDLGSGVGQVVLQVAAATN-CKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSE-EWR-ER 249 (438)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHCC-CSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSH-HHH-HH
T ss_pred CCCEEEEeCCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCC-ccc-cc
Confidence 456899999999999999998876 45799999 0 23 26899999999875 321 00
Q ss_pred CCCCCceeEEEEcC
Q 042171 61 SENEVNFDYAFMDA 74 (125)
Q Consensus 61 ~~~~~~fD~v~id~ 74 (125)
-..||+||+..
T Consensus 250 ---~~~aDVVf~Nn 260 (438)
T 3uwp_A 250 ---IANTSVIFVNN 260 (438)
T ss_dssp ---HHTCSEEEECC
T ss_pred ---cCCccEEEEcc
Confidence 14699999853
No 228
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.30 E-value=7e-07 Score=63.78 Aligned_cols=60 Identities=12% Similarity=0.027 Sum_probs=47.4
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe-------------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEE
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID-------------ARVDHKINFIESEALSVLDQLLKDSENEVNFDYA 70 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD-------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v 70 (125)
++.+|||||||+|..+..+++. +.+++++| .....+++++.+|+.+. + + .++||+|
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~---~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~-~-~------~~~fD~v 105 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPK---FKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNL-N-I------NRKFDLI 105 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGG---SSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGC-C-C------SCCEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHC---CCcEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccC-C-c------cCCceEE
Confidence 5679999999999999999987 46899999 11112799999999764 2 1 3689999
Q ss_pred EEcC
Q 042171 71 FMDA 74 (125)
Q Consensus 71 ~id~ 74 (125)
++..
T Consensus 106 ~~~~ 109 (246)
T 1y8c_A 106 TCCL 109 (246)
T ss_dssp EECT
T ss_pred EEcC
Confidence 9865
No 229
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.29 E-value=7.4e-07 Score=63.74 Aligned_cols=59 Identities=20% Similarity=0.254 Sum_probs=46.4
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe-------------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEE
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID-------------ARVDHKINFIESEALSVLDQLLKDSENEVNFDYA 70 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD-------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v 70 (125)
+..+|||||||+|..+..+++. .+++++| .....+++++.+|+.+. + + .++||+|
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~----~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~-~-~------~~~fD~v 100 (243)
T 3d2l_A 33 PGKRIADIGCGTGTATLLLADH----YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMREL-E-L------PEPVDAI 100 (243)
T ss_dssp TTCEEEEESCTTCHHHHHHTTT----SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGC-C-C------SSCEEEE
T ss_pred CCCeEEEecCCCCHHHHHHhhC----CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhc-C-C------CCCcCEE
Confidence 3479999999999999998876 6899999 11225799999998764 2 1 3689999
Q ss_pred EEcC
Q 042171 71 FMDA 74 (125)
Q Consensus 71 ~id~ 74 (125)
++..
T Consensus 101 ~~~~ 104 (243)
T 3d2l_A 101 TILC 104 (243)
T ss_dssp EECT
T ss_pred EEeC
Confidence 9864
No 230
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=98.29 E-value=5.2e-07 Score=63.63 Aligned_cols=63 Identities=16% Similarity=0.026 Sum_probs=47.7
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEeC--------CCCCcEEEEecchHHHHHHHhhcCCCCCceeEEEEcCC
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAIDA--------RVDHKINFIESEALSVLDQLLKDSENEVNFDYAFMDAD 75 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD~--------~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~id~~ 75 (125)
+..+|||||||+|..+..+++. +.+++++|. .-..+++++.+|..+. + . .++||+|++...
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~d~~~~-~-~------~~~fD~v~~~~~ 111 (211)
T 3e23_A 43 AGAKILELGCGAGYQAEAMLAA---GFDVDATDGSPELAAEASRRLGRPVRTMLFHQL-D-A------IDAYDAVWAHAC 111 (211)
T ss_dssp TTCEEEESSCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHTSCCEECCGGGC-C-C------CSCEEEEEECSC
T ss_pred CCCcEEEECCCCCHHHHHHHHc---CCeEEEECCCHHHHHHHHHhcCCceEEeeeccC-C-C------CCcEEEEEecCc
Confidence 4569999999999999999987 579999991 0001567888888765 2 1 588999998765
Q ss_pred Cc
Q 042171 76 KD 77 (125)
Q Consensus 76 ~~ 77 (125)
..
T Consensus 112 l~ 113 (211)
T 3e23_A 112 LL 113 (211)
T ss_dssp GG
T ss_pred hh
Confidence 43
No 231
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.28 E-value=1.5e-06 Score=65.15 Aligned_cols=58 Identities=14% Similarity=0.047 Sum_probs=45.0
Q ss_pred EEEEEcCcccHHHHHHHhhCCCCCEEEEEe------------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEEEcC
Q 042171 7 KTIEIGVFTGYSLFLTALTIPEDGQITAID------------ARVDHKINFIESEALSVLDQLLKDSENEVNFDYAFMDA 74 (125)
Q Consensus 7 ~vLeiG~g~G~~t~~la~~~~~~~~v~~iD------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~id~ 74 (125)
+|||||||+|..|..+++. .++|+++| .. ..+++++++|+.+.- +. +...+|.|+.+-
T Consensus 49 ~VLEIG~G~G~lt~~L~~~---~~~V~avEid~~~~~~l~~~~~-~~~v~vi~~D~l~~~--~~----~~~~~~~iv~Nl 118 (271)
T 3fut_A 49 PVFEVGPGLGALTRALLEA---GAEVTAIEKDLRLRPVLEETLS-GLPVRLVFQDALLYP--WE----EVPQGSLLVANL 118 (271)
T ss_dssp CEEEECCTTSHHHHHHHHT---TCCEEEEESCGGGHHHHHHHTT-TSSEEEEESCGGGSC--GG----GSCTTEEEEEEE
T ss_pred eEEEEeCchHHHHHHHHHc---CCEEEEEECCHHHHHHHHHhcC-CCCEEEEECChhhCC--hh----hccCccEEEecC
Confidence 8999999999999999997 47899999 22 258999999998751 21 013688888643
No 232
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.28 E-value=3.9e-07 Score=62.15 Aligned_cols=63 Identities=10% Similarity=0.123 Sum_probs=48.0
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEEEcC
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------ARVDHKINFIESEALSVLDQLLKDSENEVNFDYAFMDA 74 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~id~ 74 (125)
+..+|||+|||+|..+.++++.. .+++++| ....++++++.+| ++ + ..++||+|++..
T Consensus 17 ~~~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~v~~~~~d----~~-~-----~~~~~D~v~~~~ 83 (170)
T 3i9f_A 17 KKGVIVDYGCGNGFYCKYLLEFA---TKLYCIDINVIALKEVKEKFDSVITLSDP----KE-I-----PDNSVDFILFAN 83 (170)
T ss_dssp CCEEEEEETCTTCTTHHHHHTTE---EEEEEECSCHHHHHHHHHHCTTSEEESSG----GG-S-----CTTCEEEEEEES
T ss_pred CCCeEEEECCCCCHHHHHHHhhc---CeEEEEeCCHHHHHHHHHhCCCcEEEeCC----CC-C-----CCCceEEEEEcc
Confidence 44599999999999999999875 4999999 1113689999998 23 2 257899999876
Q ss_pred CCcCC
Q 042171 75 DKDNY 79 (125)
Q Consensus 75 ~~~~~ 79 (125)
.....
T Consensus 84 ~l~~~ 88 (170)
T 3i9f_A 84 SFHDM 88 (170)
T ss_dssp CSTTC
T ss_pred chhcc
Confidence 65433
No 233
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.26 E-value=1.1e-06 Score=69.58 Aligned_cols=59 Identities=19% Similarity=0.154 Sum_probs=48.5
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
+..+|||+|||+|..++.+|+. ..+|+++| .++. ++++.+|+.+.++ .+||
T Consensus 290 ~~~~VLDlgcG~G~~sl~la~~---~~~V~gvD~s~~ai~~A~~n~~~ngl~--v~~~~~d~~~~~~---------~~fD 355 (425)
T 2jjq_A 290 EGEKILDMYSGVGTFGIYLAKR---GFNVKGFDSNEFAIEMARRNVEINNVD--AEFEVASDREVSV---------KGFD 355 (425)
T ss_dssp CSSEEEEETCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTCC--EEEEECCTTTCCC---------TTCS
T ss_pred CCCEEEEeeccchHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChHHcCc---------cCCC
Confidence 4579999999999999999986 46899999 2453 9999999987632 3799
Q ss_pred EEEEcCCC
Q 042171 69 YAFMDADK 76 (125)
Q Consensus 69 ~v~id~~~ 76 (125)
+|++|...
T Consensus 356 ~Vv~dPPr 363 (425)
T 2jjq_A 356 TVIVDPPR 363 (425)
T ss_dssp EEEECCCT
T ss_pred EEEEcCCc
Confidence 99998664
No 234
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.24 E-value=6.8e-07 Score=63.77 Aligned_cols=59 Identities=12% Similarity=0.153 Sum_probs=46.6
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe----------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEEEc
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID----------ARVDHKINFIESEALSVLDQLLKDSENEVNFDYAFMD 73 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD----------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~id 73 (125)
++.+|||||||+|..+..+++.. .+++++| ..+ .+++++.+|+.+. + + .++||+|++.
T Consensus 40 ~~~~vLdiG~G~G~~~~~l~~~~---~~v~~~D~s~~~~~~a~~~~-~~~~~~~~d~~~~-~-~------~~~~D~v~~~ 107 (239)
T 3bxo_A 40 EASSLLDVACGTGTHLEHFTKEF---GDTAGLELSEDMLTHARKRL-PDATLHQGDMRDF-R-L------GRKFSAVVSM 107 (239)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHH---SEEEEEESCHHHHHHHHHHC-TTCEEEECCTTTC-C-C------SSCEEEEEEC
T ss_pred CCCeEEEecccCCHHHHHHHHhC---CcEEEEeCCHHHHHHHHHhC-CCCEEEECCHHHc-c-c------CCCCcEEEEc
Confidence 46799999999999999999874 3899999 112 4689999998764 2 1 3689999963
Q ss_pred C
Q 042171 74 A 74 (125)
Q Consensus 74 ~ 74 (125)
.
T Consensus 108 ~ 108 (239)
T 3bxo_A 108 F 108 (239)
T ss_dssp T
T ss_pred C
Confidence 3
No 235
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.23 E-value=1.9e-06 Score=65.77 Aligned_cols=63 Identities=14% Similarity=0.232 Sum_probs=49.5
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe-------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEEEcCCC
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID-------ARVDHKINFIESEALSVLDQLLKDSENEVNFDYAFMDADK 76 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD-------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~id~~~ 76 (125)
+..+|||||||+|..+..+++..| +.+++++| +.-..+++++.+|..+. + ..||+|++....
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~~---~-------p~~D~v~~~~~l 256 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICETFP-KLKCIVFDRPQVVENLSGSNNLTYVGGDMFTS---I-------PNADAVLLKYIL 256 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEECHHHHTTCCCBTTEEEEECCTTTC---C-------CCCSEEEEESCG
T ss_pred cCceEEEeCCCccHHHHHHHHHCC-CCeEEEeeCHHHHhhcccCCCcEEEeccccCC---C-------CCccEEEeehhh
Confidence 457999999999999999999987 68999999 21124699999998652 2 239999986544
Q ss_pred c
Q 042171 77 D 77 (125)
Q Consensus 77 ~ 77 (125)
+
T Consensus 257 h 257 (352)
T 1fp2_A 257 H 257 (352)
T ss_dssp G
T ss_pred c
Confidence 3
No 236
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.22 E-value=2.1e-06 Score=66.21 Aligned_cols=63 Identities=14% Similarity=0.131 Sum_probs=50.2
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe-------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEEEcCCC
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID-------ARVDHKINFIESEALSVLDQLLKDSENEVNFDYAFMDADK 76 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD-------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~id~~~ 76 (125)
+..+|||||||+|..+..++++.| +.+++++| +.-.++|+++.+|..+.+| .. |+|++....
T Consensus 203 ~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~~~p--------~~--D~v~~~~vl 271 (368)
T 3reo_A 203 GLTTIVDVGGGTGAVASMIVAKYP-SINAINFDLPHVIQDAPAFSGVEHLGGDMFDGVP--------KG--DAIFIKWIC 271 (368)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEECHHHHTTCCCCTTEEEEECCTTTCCC--------CC--SEEEEESCG
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCC-CCEEEEEehHHHHHhhhhcCCCEEEecCCCCCCC--------CC--CEEEEechh
Confidence 357999999999999999999998 78999999 3333689999999875322 22 999986654
Q ss_pred c
Q 042171 77 D 77 (125)
Q Consensus 77 ~ 77 (125)
+
T Consensus 272 h 272 (368)
T 3reo_A 272 H 272 (368)
T ss_dssp G
T ss_pred h
Confidence 4
No 237
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.22 E-value=1.1e-06 Score=68.70 Aligned_cols=63 Identities=8% Similarity=0.186 Sum_probs=51.9
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe-CCC------CCcEEEEecchHHHHHHHhhcCCCCCceeEEEEcCCC
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID-ARV------DHKINFIESEALSVLDQLLKDSENEVNFDYAFMDADK 76 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD-~~~------~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~id~~~ 76 (125)
...++||+||++|.||..+++. +++|++|| ..+ ..+|+++++|+....|. ..+||.|++|...
T Consensus 211 ~G~~vlDLGAaPGGWT~~l~~r---g~~V~aVD~~~l~~~l~~~~~V~~~~~d~~~~~~~-------~~~~D~vvsDm~~ 280 (375)
T 4auk_A 211 NGMWAVDLGACPGGWTYQLVKR---NMWVYSVDNGPMAQSLMDTGQVTWLREDGFKFRPT-------RSNISWMVCDMVE 280 (375)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT---TCEEEEECSSCCCHHHHTTTCEEEECSCTTTCCCC-------SSCEEEEEECCSS
T ss_pred CCCEEEEeCcCCCHHHHHHHHC---CCEEEEEEhhhcChhhccCCCeEEEeCccccccCC-------CCCcCEEEEcCCC
Confidence 3568999999999999999886 68999999 333 35899999999876432 4689999999876
No 238
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.22 E-value=2.2e-06 Score=64.88 Aligned_cols=61 Identities=13% Similarity=0.152 Sum_probs=45.9
Q ss_pred CCEEEEEcC------cccHHHHHHHhhCCCCCEEEEEe-CCCCCcEEE-EecchHHHHHHHhhcCCCCCceeEEEEcCC
Q 042171 5 LKKTIEIGV------FTGYSLFLTALTIPEDGQITAID-ARVDHKINF-IESEALSVLDQLLKDSENEVNFDYAFMDAD 75 (125)
Q Consensus 5 ~~~vLeiG~------g~G~~t~~la~~~~~~~~v~~iD-~~~~~~i~~-~~gd~~~~l~~~~~~~~~~~~fD~v~id~~ 75 (125)
..+|||+|| |+|. ..+++.++++++|+++| ...-+++++ +++|+.+. + + .++||+|++|..
T Consensus 64 g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~v~~v~~~i~gD~~~~-~-~------~~~fD~Vvsn~~ 132 (290)
T 2xyq_A 64 NMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDFVSDADSTLIGDCATV-H-T------ANKWDLIISDMY 132 (290)
T ss_dssp TCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCCBCSSSEEEESCGGGC-C-C------SSCEEEEEECCC
T ss_pred CCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCCCCCCEEEEECccccC-C-c------cCcccEEEEcCC
Confidence 459999999 4466 55677787679999999 222357889 99999764 2 1 367999999864
No 239
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.21 E-value=2.1e-06 Score=64.99 Aligned_cols=74 Identities=18% Similarity=0.090 Sum_probs=48.0
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe--CC-C------CCcEEEEe-cchHHHHH-HHhhcCCCCCceeEEEE
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID--AR-V------DHKINFIE-SEALSVLD-QLLKDSENEVNFDYAFM 72 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD--~~-~------~~~i~~~~-gd~~~~l~-~~~~~~~~~~~fD~v~i 72 (125)
+..+|||||||||..|.++++. + .++|+++| .+ + ..++.... .++....+ .+ +..+||+|++
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~-g-a~~V~aVDvs~~mL~~a~r~~~rv~~~~~~ni~~l~~~~l-----~~~~fD~v~~ 157 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQN-G-AKLVYAVDVGTNQLVWKLRQDDRVRSMEQYNFRYAEPVDF-----TEGLPSFASI 157 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-T-CSEEEEECSSSSCSCHHHHTCTTEEEECSCCGGGCCGGGC-----TTCCCSEEEE
T ss_pred cccEEEecCCCccHHHHHHHhC-C-CCEEEEEECCHHHHHHHHHhCcccceecccCceecchhhC-----CCCCCCEEEE
Confidence 3469999999999999999886 3 57999999 11 1 13554443 34433211 11 1245999999
Q ss_pred cCCCcCCHHHHh
Q 042171 73 DADKDNYCNYMR 84 (125)
Q Consensus 73 d~~~~~~~~~~~ 84 (125)
|....+....++
T Consensus 158 d~sf~sl~~vL~ 169 (291)
T 3hp7_A 158 DVSFISLNLILP 169 (291)
T ss_dssp CCSSSCGGGTHH
T ss_pred EeeHhhHHHHHH
Confidence 987655444444
No 240
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=98.19 E-value=4.7e-07 Score=69.25 Aligned_cols=61 Identities=20% Similarity=0.192 Sum_probs=48.2
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
...+|||+|||+|..++.+++..+ ..+|+++| .++ .++++.+|..+.. .++||
T Consensus 196 ~~~~VLDlGcG~G~~~~~la~~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~--~~~~~~~d~~~~~---------~~~fD 263 (343)
T 2pjd_A 196 TKGKVLDVGCGAGVLSVAFARHSP-KIRLTLCDVSAPAVEASRATLAANGV--EGEVFASNVFSEV---------KGRFD 263 (343)
T ss_dssp CCSBCCBTTCTTSHHHHHHHHHCT-TCBCEEEESBHHHHHHHHHHHHHTTC--CCEEEECSTTTTC---------CSCEE
T ss_pred CCCeEEEecCccCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHhCC--CCEEEEccccccc---------cCCee
Confidence 356899999999999999999876 67999999 233 3677888886531 46899
Q ss_pred EEEEcCCC
Q 042171 69 YAFMDADK 76 (125)
Q Consensus 69 ~v~id~~~ 76 (125)
+|+++...
T Consensus 264 ~Iv~~~~~ 271 (343)
T 2pjd_A 264 MIISNPPF 271 (343)
T ss_dssp EEEECCCC
T ss_pred EEEECCCc
Confidence 99997653
No 241
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.18 E-value=3.3e-06 Score=65.15 Aligned_cols=65 Identities=14% Similarity=0.118 Sum_probs=51.3
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe-------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEEEcCCC
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID-------ARVDHKINFIESEALSVLDQLLKDSENEVNFDYAFMDADK 76 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD-------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~id~~~ 76 (125)
+..+|||||||+|..+..++++.| +.+++.+| +.-.++|+++.+|..+.+| .. |+|++....
T Consensus 201 ~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~~~~~~~a~~~~~v~~~~~D~~~~~p--------~~--D~v~~~~vl 269 (364)
T 3p9c_A 201 GLGTLVDVGGGVGATVAAIAAHYP-TIKGVNFDLPHVISEAPQFPGVTHVGGDMFKEVP--------SG--DTILMKWIL 269 (364)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEECHHHHTTCCCCTTEEEEECCTTTCCC--------CC--SEEEEESCG
T ss_pred CCCEEEEeCCCCCHHHHHHHHHCC-CCeEEEecCHHHHHhhhhcCCeEEEeCCcCCCCC--------CC--CEEEehHHh
Confidence 357999999999999999999998 78999999 3333689999999876221 23 999986655
Q ss_pred cCC
Q 042171 77 DNY 79 (125)
Q Consensus 77 ~~~ 79 (125)
+.+
T Consensus 270 h~~ 272 (364)
T 3p9c_A 270 HDW 272 (364)
T ss_dssp GGS
T ss_pred ccC
Confidence 443
No 242
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.18 E-value=2.2e-06 Score=60.41 Aligned_cols=65 Identities=14% Similarity=0.144 Sum_probs=46.9
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEeC-C------CCCcEEEEecchHHHHHHHhhcCCCCCceeEEEEcCCC
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAIDA-R------VDHKINFIESEALSVLDQLLKDSENEVNFDYAFMDADK 76 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD~-~------~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~id~~~ 76 (125)
++.+|||||||+|..+..+++. + .+++++|. . -....+++.+|+.+....+ ..++||+|++....
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~-~--~~~~~~D~~~~~~~~~~~~~~~~~~~d~~~~~~~~-----~~~~fD~v~~~~~l 103 (230)
T 3cc8_A 32 EWKEVLDIGCSSGALGAAIKEN-G--TRVSGIEAFPEAAEQAKEKLDHVVLGDIETMDMPY-----EEEQFDCVIFGDVL 103 (230)
T ss_dssp TCSEEEEETCTTSHHHHHHHTT-T--CEEEEEESSHHHHHHHHTTSSEEEESCTTTCCCCS-----CTTCEEEEEEESCG
T ss_pred CCCcEEEeCCCCCHHHHHHHhc-C--CeEEEEeCCHHHHHHHHHhCCcEEEcchhhcCCCC-----CCCccCEEEECChh
Confidence 5679999999999999999987 3 89999991 0 0112378888887531112 24789999987553
No 243
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.18 E-value=3.6e-06 Score=64.80 Aligned_cols=65 Identities=17% Similarity=0.150 Sum_probs=51.1
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe-------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEEEcCCC
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID-------ARVDHKINFIESEALSVLDQLLKDSENEVNFDYAFMDADK 76 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD-------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~id~~~ 76 (125)
+..+|||||||+|..+..+++..| +.+++++| +.-..+++++.+|..+ + + .. ||+|++....
T Consensus 209 ~~~~vLDvG~G~G~~~~~l~~~~~-~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~--~-~------~~-~D~v~~~~~l 277 (372)
T 1fp1_D 209 GISTLVDVGGGSGRNLELIISKYP-LIKGINFDLPQVIENAPPLSGIEHVGGDMFA--S-V------PQ-GDAMILKAVC 277 (372)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEECHHHHTTCCCCTTEEEEECCTTT--C-C------CC-EEEEEEESSG
T ss_pred CCCEEEEeCCCCcHHHHHHHHHCC-CCeEEEeChHHHHHhhhhcCCCEEEeCCccc--C-C------CC-CCEEEEeccc
Confidence 457999999999999999999997 68999999 2212579999999875 2 2 23 9999987654
Q ss_pred cCC
Q 042171 77 DNY 79 (125)
Q Consensus 77 ~~~ 79 (125)
+++
T Consensus 278 h~~ 280 (372)
T 1fp1_D 278 HNW 280 (372)
T ss_dssp GGS
T ss_pred ccC
Confidence 443
No 244
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=98.16 E-value=6.2e-07 Score=62.85 Aligned_cols=63 Identities=8% Similarity=0.118 Sum_probs=45.3
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe-------------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEE
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID-------------ARVDHKINFIESEALSVLDQLLKDSENEVNFDYA 70 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD-------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v 70 (125)
+..+|||+|||+|..++.++... +.+++++| .....+++++.+|+.+. + + +.++||+|
T Consensus 23 ~~~~vLDiGcG~G~~~~~~~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~-~-~-----~~~~fD~v 93 (209)
T 2p8j_A 23 LDKTVLDCGAGGDLPPLSIFVED--GYKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKL-P-F-----KDESMSFV 93 (209)
T ss_dssp SCSEEEEESCCSSSCTHHHHHHT--TCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSC-C-S-----CTTCEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhC--CCEEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhC-C-C-----CCCceeEE
Confidence 45799999999999865554442 57999999 01124688999999764 2 2 24789999
Q ss_pred EEcCC
Q 042171 71 FMDAD 75 (125)
Q Consensus 71 ~id~~ 75 (125)
++...
T Consensus 94 ~~~~~ 98 (209)
T 2p8j_A 94 YSYGT 98 (209)
T ss_dssp EECSC
T ss_pred EEcCh
Confidence 98543
No 245
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.15 E-value=1.8e-06 Score=60.74 Aligned_cols=62 Identities=18% Similarity=0.234 Sum_probs=46.3
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe----------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEEEc
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID----------ARVDHKINFIESEALSVLDQLLKDSENEVNFDYAFMD 73 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD----------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~id 73 (125)
+..+|||||||+|..+..+ + ..+++++| ... .+++++.+|+.+. + + +.++||+|++.
T Consensus 36 ~~~~vLdiG~G~G~~~~~l----~-~~~v~~vD~s~~~~~~a~~~~-~~~~~~~~d~~~~-~-~-----~~~~fD~v~~~ 102 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL----P-YPQKVGVEPSEAMLAVGRRRA-PEATWVRAWGEAL-P-F-----PGESFDVVLLF 102 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC----C-CSEEEEECCCHHHHHHHHHHC-TTSEEECCCTTSC-C-S-----CSSCEEEEEEE
T ss_pred CCCeEEEECCCCCHhHHhC----C-CCeEEEEeCCHHHHHHHHHhC-CCcEEEEcccccC-C-C-----CCCcEEEEEEc
Confidence 4679999999999998877 2 23899999 112 5789999998764 3 2 25789999987
Q ss_pred CCCcC
Q 042171 74 ADKDN 78 (125)
Q Consensus 74 ~~~~~ 78 (125)
.....
T Consensus 103 ~~l~~ 107 (211)
T 2gs9_A 103 TTLEF 107 (211)
T ss_dssp SCTTT
T ss_pred Chhhh
Confidence 65443
No 246
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.15 E-value=1.4e-06 Score=65.53 Aligned_cols=50 Identities=16% Similarity=0.225 Sum_probs=40.7
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCC-CCEEEEEe----------CCCCCcEEEEecchHHH
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPE-DGQITAID----------ARVDHKINFIESEALSV 53 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~-~~~v~~iD----------~~~~~~i~~~~gd~~~~ 53 (125)
...+|||||||+|..|..|++..+. +++|+++| .....+++++++|+.+.
T Consensus 42 ~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~~~~v~~i~~D~~~~ 102 (279)
T 3uzu_A 42 RGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRFGELLELHAGDALTF 102 (279)
T ss_dssp TTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHHGGGEEEEESCGGGC
T ss_pred CcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhcCCCcEEEECChhcC
Confidence 3568999999999999999998653 46799999 11136899999999875
No 247
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.15 E-value=4.3e-06 Score=61.17 Aligned_cols=47 Identities=17% Similarity=0.159 Sum_probs=39.2
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe------------CCCCCcEEEEecchHHH
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID------------ARVDHKINFIESEALSV 53 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD------------~~~~~~i~~~~gd~~~~ 53 (125)
+..+|||||||+|..|..+++. .++|+++| ....++++++++|+.+.
T Consensus 30 ~~~~VLDiG~G~G~lt~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~D~~~~ 88 (244)
T 1qam_A 30 EHDNIFEIGSGKGHFTLELVQR---CNFVTAIEIDHKLCKTTENKLVDHDNFQVLNKDILQF 88 (244)
T ss_dssp TTCEEEEECCTTSHHHHHHHHH---SSEEEEECSCHHHHHHHHHHTTTCCSEEEECCCGGGC
T ss_pred CCCEEEEEeCCchHHHHHHHHc---CCeEEEEECCHHHHHHHHHhhccCCCeEEEEChHHhC
Confidence 3568999999999999999997 37899999 11125899999999865
No 248
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.15 E-value=1.6e-05 Score=59.18 Aligned_cols=71 Identities=8% Similarity=0.017 Sum_probs=49.2
Q ss_pred CCCEEEEEcCcc---cHHHHHHHhhCCCCCEEEEEe------------CCCCCcEEEEecchHHHHHHH-----hhcCCC
Q 042171 4 KLKKTIEIGVFT---GYSLFLTALTIPEDGQITAID------------ARVDHKINFIESEALSVLDQL-----LKDSEN 63 (125)
Q Consensus 4 ~~~~vLeiG~g~---G~~t~~la~~~~~~~~v~~iD------------~~~~~~i~~~~gd~~~~l~~~-----~~~~~~ 63 (125)
...+|||||||+ |..+..+++..| +++|+++| ..-..+++++.+|..+.-..+ .... +
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p-~~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~-d 154 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNP-DARVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMI-D 154 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCT-TCEEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHC-C
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCC-CCEEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccC-C
Confidence 347999999999 988877777666 79999999 122368999999997531100 0000 1
Q ss_pred CCceeEEEEcCCC
Q 042171 64 EVNFDYAFMDADK 76 (125)
Q Consensus 64 ~~~fD~v~id~~~ 76 (125)
..+||+|++....
T Consensus 155 ~~~~d~v~~~~vl 167 (274)
T 2qe6_A 155 FSRPAAIMLVGML 167 (274)
T ss_dssp TTSCCEEEETTTG
T ss_pred CCCCEEEEEechh
Confidence 2579999986543
No 249
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.14 E-value=4.8e-06 Score=63.70 Aligned_cols=64 Identities=17% Similarity=0.226 Sum_probs=50.2
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe-------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEEEcCCC
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID-------ARVDHKINFIESEALSVLDQLLKDSENEVNFDYAFMDADK 76 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD-------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~id~~~ 76 (125)
+..+|||||||+|..+..+++..| +.+++++| +.-..+++++.+|..+ + + .+||+|++....
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~--~-~-------~~~D~v~~~~vl 261 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFP-HLKCTVFDQPQVVGNLTGNENLNFVGGDMFK--S-I-------PSADAVLLKWVL 261 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCT-TSEEEEEECHHHHSSCCCCSSEEEEECCTTT--C-C-------CCCSEEEEESCG
T ss_pred CCCEEEEECCCcCHHHHHHHHHCC-CCeEEEeccHHHHhhcccCCCcEEEeCccCC--C-C-------CCceEEEEcccc
Confidence 457999999999999999999997 68999999 2212469999999875 2 2 249999986554
Q ss_pred cC
Q 042171 77 DN 78 (125)
Q Consensus 77 ~~ 78 (125)
+.
T Consensus 262 h~ 263 (358)
T 1zg3_A 262 HD 263 (358)
T ss_dssp GG
T ss_pred cC
Confidence 33
No 250
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.14 E-value=1.9e-06 Score=62.88 Aligned_cols=59 Identities=14% Similarity=0.152 Sum_probs=44.4
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe----------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEEEc
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID----------ARVDHKINFIESEALSVLDQLLKDSENEVNFDYAFMD 73 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD----------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~id 73 (125)
++.+|||||||+|..+..+++. +.+++++| ..... .++.+|+.+. + + ..++||+|++.
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~--~~~~~d~~~~-~-~-----~~~~fD~v~~~ 121 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQER---GFEVVLVDPSKEMLEVAREKGVK--NVVEAKAEDL-P-F-----PSGAFEAVLAL 121 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTT---TCEEEEEESCHHHHHHHHHHTCS--CEEECCTTSC-C-S-----CTTCEEEEEEC
T ss_pred CCCeEEEeCCCcCHHHHHHHHc---CCeEEEEeCCHHHHHHHHhhcCC--CEEECcHHHC-C-C-----CCCCEEEEEEc
Confidence 4679999999999999999986 57999999 11112 2788888754 3 2 25789999985
Q ss_pred C
Q 042171 74 A 74 (125)
Q Consensus 74 ~ 74 (125)
.
T Consensus 122 ~ 122 (260)
T 2avn_A 122 G 122 (260)
T ss_dssp S
T ss_pred c
Confidence 4
No 251
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.12 E-value=2.9e-06 Score=63.59 Aligned_cols=68 Identities=15% Similarity=0.147 Sum_probs=49.1
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe-------------CC--------CCCcEEEEecchHHHH--HHHhhc
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID-------------AR--------VDHKINFIESEALSVL--DQLLKD 60 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD-------------~~--------~~~~i~~~~gd~~~~l--~~~~~~ 60 (125)
++.+|||||||+|..+..+++. + ..+++++| .. ...+++++.+|+.+.. ..+..
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~-~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~- 110 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKG-R-INKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRD- 110 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHT-T-CSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSS-
T ss_pred CCCEEEEECCCCcHHHHHHHhc-C-CCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhccc-
Confidence 5679999999999999999874 3 67999999 00 2247999999998652 01210
Q ss_pred CCCCCceeEEEEcCCC
Q 042171 61 SENEVNFDYAFMDADK 76 (125)
Q Consensus 61 ~~~~~~fD~v~id~~~ 76 (125)
..++||+|++....
T Consensus 111 --~~~~fD~V~~~~~l 124 (313)
T 3bgv_A 111 --PQMCFDICSCQFVC 124 (313)
T ss_dssp --TTCCEEEEEEETCG
T ss_pred --CCCCEEEEEEecch
Confidence 13589999986654
No 252
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.07 E-value=3e-06 Score=65.92 Aligned_cols=67 Identities=12% Similarity=0.080 Sum_probs=44.4
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe-----------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEEE
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID-----------ARVDHKINFIESEALSVLDQLLKDSENEVNFDYAFM 72 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD-----------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~i 72 (125)
+..+|||||||+|..+..+++. +.+++++| .++.....+...+..+.++.. .++||+|++
T Consensus 107 ~~~~VLDiGcG~G~~~~~l~~~---g~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~------~~~fD~I~~ 177 (416)
T 4e2x_A 107 PDPFIVEIGCNDGIMLRTIQEA---GVRHLGFEPSSGVAAKAREKGIRVRTDFFEKATADDVRRT------EGPANVIYA 177 (416)
T ss_dssp SSCEEEEETCTTTTTHHHHHHT---TCEEEEECCCHHHHHHHHTTTCCEECSCCSHHHHHHHHHH------HCCEEEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHc---CCcEEEECCCHHHHHHHHHcCCCcceeeechhhHhhcccC------CCCEEEEEE
Confidence 3569999999999999999985 56999999 223222222222333333422 478999999
Q ss_pred cCCCcCC
Q 042171 73 DADKDNY 79 (125)
Q Consensus 73 d~~~~~~ 79 (125)
.....+.
T Consensus 178 ~~vl~h~ 184 (416)
T 4e2x_A 178 ANTLCHI 184 (416)
T ss_dssp ESCGGGC
T ss_pred CChHHhc
Confidence 7664443
No 253
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.06 E-value=1e-05 Score=62.14 Aligned_cols=66 Identities=15% Similarity=0.136 Sum_probs=51.6
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe-------------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEE
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID-------------ARVDHKINFIESEALSVLDQLLKDSENEVNFDYA 70 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD-------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v 70 (125)
+..+|||||||+|..++.++++.| +.+++..| ....+||+++.+|..+. | ...+|++
T Consensus 179 ~~~~v~DvGgG~G~~~~~l~~~~p-~~~~~~~dlp~v~~~a~~~~~~~~~~rv~~~~gD~~~~-~--------~~~~D~~ 248 (353)
T 4a6d_A 179 VFPLMCDLGGGAGALAKECMSLYP-GCKITVFDIPEVVWTAKQHFSFQEEEQIDFQEGDFFKD-P--------LPEADLY 248 (353)
T ss_dssp GCSEEEEETCTTSHHHHHHHHHCS-SCEEEEEECHHHHHHHHHHSCC--CCSEEEEESCTTTS-C--------CCCCSEE
T ss_pred cCCeEEeeCCCCCHHHHHHHHhCC-CceeEeccCHHHHHHHHHhhhhcccCceeeecCccccC-C--------CCCceEE
Confidence 356899999999999999999998 78999888 23458999999998643 1 2458999
Q ss_pred EEcCCCcCC
Q 042171 71 FMDADKDNY 79 (125)
Q Consensus 71 ~id~~~~~~ 79 (125)
++-.-.+.+
T Consensus 249 ~~~~vlh~~ 257 (353)
T 4a6d_A 249 ILARVLHDW 257 (353)
T ss_dssp EEESSGGGS
T ss_pred EeeeecccC
Confidence 986554444
No 254
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.06 E-value=1.7e-05 Score=61.98 Aligned_cols=96 Identities=19% Similarity=0.087 Sum_probs=65.6
Q ss_pred CCEEEEEcCcccHHHHHHHhhCC-------------------------------------CCCEEEEEe-----------
Q 042171 5 LKKTIEIGVFTGYSLFLTALTIP-------------------------------------EDGQITAID----------- 36 (125)
Q Consensus 5 ~~~vLeiG~g~G~~t~~la~~~~-------------------------------------~~~~v~~iD----------- 36 (125)
..+|||.+||+|..++.+|.... ...+|+++|
T Consensus 196 ~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~Ar~ 275 (385)
T 3ldu_A 196 GRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIARE 275 (385)
T ss_dssp TSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHHHH
T ss_pred CCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHHHH
Confidence 46899999999999999887532 126799999
Q ss_pred ----CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEEEcCCCcCCHHHHhhhCCCCCCcchHHHHHHHHHHhhcCCCe
Q 042171 37 ----ARVDHKINFIESEALSVLDQLLKDSENEVNFDYAFMDADKDNYCNYMREQVPDHFRGSSKQAILDLNRSLVDDPCV 112 (125)
Q Consensus 37 ----~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 112 (125)
+++.++|+++++|+.+..+ ..+||+|++ +|+|.+... ........++++.+.++.-+++
T Consensus 276 Na~~~gl~~~i~~~~~D~~~l~~--------~~~~D~Iv~------NPPyg~rl~---~~~~l~~ly~~lg~~lk~~~g~ 338 (385)
T 3ldu_A 276 NAEIAGVDEYIEFNVGDATQFKS--------EDEFGFIIT------NPPYGERLE---DKDSVKQLYKELGYAFRKLKNW 338 (385)
T ss_dssp HHHHHTCGGGEEEEECCGGGCCC--------SCBSCEEEE------CCCCCCSHH---HHHHHHHHHHHHHHHHHTSBSC
T ss_pred HHHHcCCCCceEEEECChhhcCc--------CCCCcEEEE------CCCCcCccC---CHHHHHHHHHHHHHHHhhCCCC
Confidence 5676789999999987522 358999997 344432100 0001344566677777766666
Q ss_pred EEEEe
Q 042171 113 QLSHV 117 (125)
Q Consensus 113 ~~~~l 117 (125)
...++
T Consensus 339 ~~~ii 343 (385)
T 3ldu_A 339 SYYLI 343 (385)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 66665
No 255
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.06 E-value=1.3e-05 Score=59.42 Aligned_cols=72 Identities=14% Similarity=0.134 Sum_probs=44.0
Q ss_pred CCEEEEEcCcccHHHHHHHhh----CCCCCEE--EEEe-------------C---CCCCcE--EEEecchHHHHHHHhhc
Q 042171 5 LKKTIEIGVFTGYSLFLTALT----IPEDGQI--TAID-------------A---RVDHKI--NFIESEALSVLDQLLKD 60 (125)
Q Consensus 5 ~~~vLeiG~g~G~~t~~la~~----~~~~~~v--~~iD-------------~---~~~~~i--~~~~gd~~~~l~~~~~~ 60 (125)
+.+|||||||+|..+..+++. .+ +.+| +++| . ++ .++ .+..+++.+..+.....
T Consensus 53 ~~~VLDiG~GtG~~~~~~l~~l~~~~~-~~~v~~~~vD~S~~ml~~a~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~ 130 (292)
T 2aot_A 53 EIKILSIGGGAGEIDLQILSKVQAQYP-GVCINNEVVEPSAEQIAKYKELVAKTSNL-ENVKFAWHKETSSEYQSRMLEK 130 (292)
T ss_dssp EEEEEEETCTTSHHHHHHHHHHHHHST-TCEEEEEEECSCHHHHHHHHHHHHTCSSC-TTEEEEEECSCHHHHHHHHHTT
T ss_pred CCeEEEEcCCCCHHHHHHHHHHHhhCC-CceeeEEEEeCCHHHHHHHHHHHHhccCC-CcceEEEEecchhhhhhhhccc
Confidence 458999999999887655433 33 5655 9999 1 22 344 45677776543211000
Q ss_pred CCCCCceeEEEEcCCCcCC
Q 042171 61 SENEVNFDYAFMDADKDNY 79 (125)
Q Consensus 61 ~~~~~~fD~v~id~~~~~~ 79 (125)
-..++||+|++....++.
T Consensus 131 -~~~~~fD~V~~~~~l~~~ 148 (292)
T 2aot_A 131 -KELQKWDFIHMIQMLYYV 148 (292)
T ss_dssp -TCCCCEEEEEEESCGGGC
T ss_pred -cCCCceeEEEEeeeeeec
Confidence 014789999987654433
No 256
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.06 E-value=5.9e-07 Score=65.04 Aligned_cols=31 Identities=26% Similarity=0.133 Sum_probs=26.1
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID 36 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD 36 (125)
+..+|||||||+|..++.+++... .+|+++|
T Consensus 56 ~~~~vLDlGcG~G~~~~~l~~~~~--~~v~gvD 86 (265)
T 2i62_A 56 KGELLIDIGSGPTIYQLLSACESF--TEIIVSD 86 (265)
T ss_dssp CEEEEEEESCTTCCGGGTTGGGTE--EEEEEEE
T ss_pred CCCEEEEECCCccHHHHHHhhccc--CeEEEec
Confidence 456899999999999999887532 4899999
No 257
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.06 E-value=2.6e-05 Score=61.09 Aligned_cols=96 Identities=13% Similarity=0.012 Sum_probs=64.9
Q ss_pred CCEEEEEcCcccHHHHHHHhhCCC-------------------------------------CCEEEEEe-----------
Q 042171 5 LKKTIEIGVFTGYSLFLTALTIPE-------------------------------------DGQITAID----------- 36 (125)
Q Consensus 5 ~~~vLeiG~g~G~~t~~la~~~~~-------------------------------------~~~v~~iD----------- 36 (125)
...|||.+||+|..++.+|..... ..+|+++|
T Consensus 202 ~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~Ar~ 281 (393)
T 3k0b_A 202 DRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIAKQ 281 (393)
T ss_dssp TSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHH
T ss_pred CCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHHHH
Confidence 458999999999999887764321 25799999
Q ss_pred ----CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEEEcCCCcCCHHHHhhhCCCCCCcchHHHHHHHHHHhhcCCCe
Q 042171 37 ----ARVDHKINFIESEALSVLDQLLKDSENEVNFDYAFMDADKDNYCNYMREQVPDHFRGSSKQAILDLNRSLVDDPCV 112 (125)
Q Consensus 37 ----~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 112 (125)
+++.++|+++++|+.+..+ ..+||+|++| |+|-+... ........++++.+.++.-+++
T Consensus 282 Na~~~gl~~~I~~~~~D~~~~~~--------~~~fD~Iv~N------PPYg~rl~---~~~~l~~ly~~lg~~lk~~~g~ 344 (393)
T 3k0b_A 282 NAVEAGLGDLITFRQLQVADFQT--------EDEYGVVVAN------PPYGERLE---DEEAVRQLYREMGIVYKRMPTW 344 (393)
T ss_dssp HHHHTTCTTCSEEEECCGGGCCC--------CCCSCEEEEC------CCCCCSHH---HHHHHHHHHHHHHHHHHTCTTC
T ss_pred HHHHcCCCCceEEEECChHhCCC--------CCCCCEEEEC------CCCccccC---CchhHHHHHHHHHHHHhcCCCC
Confidence 6787789999999987521 3589999973 33322000 0001333456666777766677
Q ss_pred EEEEe
Q 042171 113 QLSHV 117 (125)
Q Consensus 113 ~~~~l 117 (125)
...++
T Consensus 345 ~~~ii 349 (393)
T 3k0b_A 345 SVYVL 349 (393)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 76665
No 258
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.04 E-value=7.6e-06 Score=60.87 Aligned_cols=31 Identities=26% Similarity=0.277 Sum_probs=26.8
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID 36 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD 36 (125)
+..+|||||||+|..++.+++. + ..+|+++|
T Consensus 79 ~~~~vLDlG~G~G~~~~~~a~~-~-~~~v~~~D 109 (281)
T 3bzb_A 79 AGKTVCELGAGAGLVSIVAFLA-G-ADQVVATD 109 (281)
T ss_dssp TTCEEEETTCTTSHHHHHHHHT-T-CSEEEEEE
T ss_pred CCCeEEEecccccHHHHHHHHc-C-CCEEEEEe
Confidence 4579999999999999999885 3 35999999
No 259
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.04 E-value=5e-06 Score=61.30 Aligned_cols=48 Identities=19% Similarity=0.217 Sum_probs=39.5
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe----------CCCCCcEEEEecchHHH
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID----------ARVDHKINFIESEALSV 53 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD----------~~~~~~i~~~~gd~~~~ 53 (125)
+..+|||||||+|..|..+++. + ..+|+++| ..-..+++++++|+.+.
T Consensus 31 ~~~~VLDiG~G~G~lt~~L~~~-~-~~~v~avEid~~~~~~~~~~~~~~v~~i~~D~~~~ 88 (249)
T 3ftd_A 31 EGNTVVEVGGGTGNLTKVLLQH-P-LKKLYVIELDREMVENLKSIGDERLEVINEDASKF 88 (249)
T ss_dssp TTCEEEEEESCHHHHHHHHTTS-C-CSEEEEECCCHHHHHHHTTSCCTTEEEECSCTTTC
T ss_pred CcCEEEEEcCchHHHHHHHHHc-C-CCeEEEEECCHHHHHHHHhccCCCeEEEEcchhhC
Confidence 3569999999999999999986 3 58999999 11235799999999875
No 260
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.02 E-value=1.1e-05 Score=63.12 Aligned_cols=96 Identities=6% Similarity=-0.070 Sum_probs=66.1
Q ss_pred CCEEEEEcCcccHHHHHHHhhCCC-------------------------------------CCEEEEEe-----------
Q 042171 5 LKKTIEIGVFTGYSLFLTALTIPE-------------------------------------DGQITAID----------- 36 (125)
Q Consensus 5 ~~~vLeiG~g~G~~t~~la~~~~~-------------------------------------~~~v~~iD----------- 36 (125)
...+||.+||+|..++..|..... ..+|+++|
T Consensus 195 ~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~Ar~ 274 (384)
T 3ldg_A 195 DKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIARK 274 (384)
T ss_dssp TSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHH
T ss_pred CCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHHHH
Confidence 458999999999999987764321 25799999
Q ss_pred ----CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEEEcCCCcCCHHHHhhhCCCCCCcchHHHHHHHHHHhhcCCCe
Q 042171 37 ----ARVDHKINFIESEALSVLDQLLKDSENEVNFDYAFMDADKDNYCNYMREQVPDHFRGSSKQAILDLNRSLVDDPCV 112 (125)
Q Consensus 37 ----~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 112 (125)
+++.++++++++|+.+..+ ..+||+|++ +|+|-+. +. .......-++++.+.++.-+++
T Consensus 275 Na~~~gl~~~I~~~~~D~~~l~~--------~~~fD~Iv~------NPPYG~r-l~--~~~~l~~ly~~lg~~lk~~~g~ 337 (384)
T 3ldg_A 275 NAREVGLEDVVKLKQMRLQDFKT--------NKINGVLIS------NPPYGER-LL--DDKAVDILYNEMGETFAPLKTW 337 (384)
T ss_dssp HHHHTTCTTTEEEEECCGGGCCC--------CCCSCEEEE------CCCCTTT-TS--CHHHHHHHHHHHHHHHTTCTTS
T ss_pred HHHHcCCCCceEEEECChHHCCc--------cCCcCEEEE------CCchhhc-cC--CHHHHHHHHHHHHHHHhhCCCc
Confidence 6787889999999987521 358999997 4444321 10 0111344566677777766677
Q ss_pred EEEEe
Q 042171 113 QLSHV 117 (125)
Q Consensus 113 ~~~~l 117 (125)
...++
T Consensus 338 ~~~ii 342 (384)
T 3ldg_A 338 SQFIL 342 (384)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 77665
No 261
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.02 E-value=1.7e-06 Score=61.16 Aligned_cols=59 Identities=10% Similarity=-0.024 Sum_probs=44.3
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEeCCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEEEcCCC
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAIDARVDHKINFIESEALSVLDQLLKDSENEVNFDYAFMDADK 76 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~id~~~ 76 (125)
+..+|||||||+|..+..++ .+++++|..-. +++++.+|+.+. + + +.++||+|++....
T Consensus 67 ~~~~vLDiG~G~G~~~~~l~------~~v~~~D~s~~-~~~~~~~d~~~~-~-~-----~~~~fD~v~~~~~l 125 (215)
T 2zfu_A 67 ASLVVADFGCGDCRLASSIR------NPVHCFDLASL-DPRVTVCDMAQV-P-L-----EDESVDVAVFCLSL 125 (215)
T ss_dssp TTSCEEEETCTTCHHHHHCC------SCEEEEESSCS-STTEEESCTTSC-S-C-----CTTCEEEEEEESCC
T ss_pred CCCeEEEECCcCCHHHHHhh------ccEEEEeCCCC-CceEEEeccccC-C-C-----CCCCEeEEEEehhc
Confidence 45789999999999988762 67999992221 678899998763 3 2 24789999987654
No 262
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.02 E-value=1.3e-06 Score=63.76 Aligned_cols=60 Identities=18% Similarity=0.275 Sum_probs=44.6
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe------------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEE
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID------------ARVDHKINFIESEALSVLDQLLKDSENEVNFDYAF 71 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~ 71 (125)
+..+|||||||+|..+..+++. .++|+++| ....++++++++|+.+. + +. ..++| .|+
T Consensus 29 ~~~~VLDiG~G~G~~~~~l~~~---~~~v~~id~~~~~~~~a~~~~~~~~~v~~~~~D~~~~-~-~~----~~~~f-~vv 98 (245)
T 1yub_A 29 ETDTVYEIGTGKGHLTTKLAKI---SKQVTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQF-Q-FP----NKQRY-KIV 98 (245)
T ss_dssp SSEEEEECSCCCSSCSHHHHHH---SSEEEESSSSCSSSSSSSCTTTTCSEEEECCSCCTTT-T-CC----CSSEE-EEE
T ss_pred CCCEEEEEeCCCCHHHHHHHHh---CCeEEEEECCHHHHHHHHHHhccCCceEEEECChhhc-C-cc----cCCCc-EEE
Confidence 3458999999999999999987 38899999 11225799999999865 2 21 12578 566
Q ss_pred Ec
Q 042171 72 MD 73 (125)
Q Consensus 72 id 73 (125)
++
T Consensus 99 ~n 100 (245)
T 1yub_A 99 GN 100 (245)
T ss_dssp EE
T ss_pred Ee
Confidence 54
No 263
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.00 E-value=5.9e-06 Score=61.41 Aligned_cols=57 Identities=12% Similarity=0.100 Sum_probs=45.8
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe-------------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEE
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID-------------ARVDHKINFIESEALSVLDQLLKDSENEVNFDYA 70 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD-------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v 70 (125)
.|.+|||||||+|..++.++ + ..+++++| .....+.++.+.|.....+ .++||+|
T Consensus 105 ~p~~VLDlGCG~gpLal~~~---~-~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~~--------~~~~Dvv 172 (253)
T 3frh_A 105 TPRRVLDIACGLNPLALYER---G-IASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAPP--------AEAGDLA 172 (253)
T ss_dssp CCSEEEEETCTTTHHHHHHT---T-CSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCC--------CCBCSEE
T ss_pred CCCeEEEecCCccHHHHHhc---c-CCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCCC--------CCCcchH
Confidence 47899999999999999876 4 79999999 2234678888888876532 4689999
Q ss_pred EE
Q 042171 71 FM 72 (125)
Q Consensus 71 ~i 72 (125)
++
T Consensus 173 Ll 174 (253)
T 3frh_A 173 LI 174 (253)
T ss_dssp EE
T ss_pred HH
Confidence 86
No 264
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=97.98 E-value=2.8e-06 Score=64.86 Aligned_cols=61 Identities=15% Similarity=0.097 Sum_probs=48.7
Q ss_pred CCEEEEEcCcccHHHHHHHhhCCCC----CEEEEEe---------------CCCCCcEEEEecchHHHHHHHhhcCCCCC
Q 042171 5 LKKTIEIGVFTGYSLFLTALTIPED----GQITAID---------------ARVDHKINFIESEALSVLDQLLKDSENEV 65 (125)
Q Consensus 5 ~~~vLeiG~g~G~~t~~la~~~~~~----~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~ 65 (125)
..+|||+|||+|..++.+++.++.. .+++++| .++ ++.++.+|+.+..+ ..
T Consensus 131 ~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~--~~~i~~~D~l~~~~--------~~ 200 (344)
T 2f8l_A 131 NVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ--KMTLLHQDGLANLL--------VD 200 (344)
T ss_dssp EEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC--CCEEEESCTTSCCC--------CC
T ss_pred CCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC--CceEEECCCCCccc--------cC
Confidence 4689999999999999999987633 7899999 234 58899999875321 46
Q ss_pred ceeEEEEcCC
Q 042171 66 NFDYAFMDAD 75 (125)
Q Consensus 66 ~fD~v~id~~ 75 (125)
+||+|+.+..
T Consensus 201 ~fD~Ii~NPP 210 (344)
T 2f8l_A 201 PVDVVISDLP 210 (344)
T ss_dssp CEEEEEEECC
T ss_pred CccEEEECCC
Confidence 8999998754
No 265
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=97.93 E-value=9.3e-06 Score=60.82 Aligned_cols=32 Identities=16% Similarity=-0.033 Sum_probs=25.4
Q ss_pred CCEEEEEcCcccH----HHHHHHhhCCC---CCEEEEEe
Q 042171 5 LKKTIEIGVFTGY----SLFLTALTIPE---DGQITAID 36 (125)
Q Consensus 5 ~~~vLeiG~g~G~----~t~~la~~~~~---~~~v~~iD 36 (125)
+.+|+|+|||||. .++.+++.++. +.+|+++|
T Consensus 106 ~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atD 144 (274)
T 1af7_A 106 EYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASD 144 (274)
T ss_dssp CEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEE
T ss_pred CcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEE
Confidence 4689999999998 56667776552 35899999
No 266
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=97.93 E-value=1.7e-05 Score=59.85 Aligned_cols=64 Identities=16% Similarity=0.102 Sum_probs=39.7
Q ss_pred CCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CCCCC-----cEEEEecchH-----HHHHHHhh
Q 042171 5 LKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------ARVDH-----KINFIESEAL-----SVLDQLLK 59 (125)
Q Consensus 5 ~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~~~~-----~i~~~~gd~~-----~~l~~~~~ 59 (125)
..+|||||||+|..+..+++. + .++|+++| .+... +++++.++.. +.++...
T Consensus 49 ~~~VLDlGCG~G~~l~~~~~~-~-~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~- 125 (302)
T 2vdw_A 49 KRKVLAIDFGNGADLEKYFYG-E-IALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVF- 125 (302)
T ss_dssp CCEEEETTCTTTTTHHHHHHT-T-CSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTC-
T ss_pred CCeEEEEecCCcHhHHHHHhc-C-CCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccc-
Confidence 569999999999755544443 2 47999999 12111 2677777762 1222110
Q ss_pred cCCCCCceeEEEEcC
Q 042171 60 DSENEVNFDYAFMDA 74 (125)
Q Consensus 60 ~~~~~~~fD~v~id~ 74 (125)
+.++||+|++-.
T Consensus 126 ---~~~~FD~V~~~~ 137 (302)
T 2vdw_A 126 ---YFGKFNIIDWQF 137 (302)
T ss_dssp ---CSSCEEEEEEES
T ss_pred ---cCCCeeEEEECc
Confidence 247899999743
No 267
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=97.91 E-value=2e-06 Score=64.67 Aligned_cols=60 Identities=8% Similarity=-0.105 Sum_probs=47.4
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe-------------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEE
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID-------------ARVDHKINFIESEALSVLDQLLKDSENEVNFDYA 70 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD-------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v 70 (125)
.|.+|||||||+|-.++.++...| ..+++++| ..+..+.++.+.|.....| ..+||++
T Consensus 132 ~p~~VLDLGCG~GpLAl~~~~~~p-~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~p--------~~~~Dva 202 (281)
T 3lcv_B 132 RPNTLRDLACGLNPLAAPWMGLPA-ETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDRL--------DEPADVT 202 (281)
T ss_dssp CCSEEEETTCTTGGGCCTTTTCCT-TCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSCC--------CSCCSEE
T ss_pred CCceeeeeccCccHHHHHHHhhCC-CCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccCC--------CCCcchH
Confidence 478999999999999999888666 79999999 1223347788888765533 5789999
Q ss_pred EE
Q 042171 71 FM 72 (125)
Q Consensus 71 ~i 72 (125)
++
T Consensus 203 L~ 204 (281)
T 3lcv_B 203 LL 204 (281)
T ss_dssp EE
T ss_pred HH
Confidence 87
No 268
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=97.91 E-value=8.3e-06 Score=67.66 Aligned_cols=61 Identities=8% Similarity=0.060 Sum_probs=46.5
Q ss_pred CCEEEEEcCcccHHHHHHHh---hCCCCCEEEEEe--------------CCCCCcEEEEecchHHHHHHHhhcCCCCCce
Q 042171 5 LKKTIEIGVFTGYSLFLTAL---TIPEDGQITAID--------------ARVDHKINFIESEALSVLDQLLKDSENEVNF 67 (125)
Q Consensus 5 ~~~vLeiG~g~G~~t~~la~---~~~~~~~v~~iD--------------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~f 67 (125)
...|||||||+|......++ +.....+|+||| .++.++|++++||..++ .+ .++.
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A~~a~~~v~~N~~~dkVtVI~gd~eev--~L------PEKV 429 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREW--VA------PEKA 429 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHHHHHHHHHHHHTTGGGEEEEESCTTTC--CC------SSCE
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHHHHhccCCCeEEEEeCcceec--cC------Cccc
Confidence 34799999999999444444 333234799999 57889999999999987 23 4789
Q ss_pred eEEEEc
Q 042171 68 DYAFMD 73 (125)
Q Consensus 68 D~v~id 73 (125)
|+|++.
T Consensus 430 DIIVSE 435 (637)
T 4gqb_A 430 DIIVSE 435 (637)
T ss_dssp EEEECC
T ss_pred CEEEEE
Confidence 999973
No 269
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=97.89 E-value=2.4e-05 Score=59.36 Aligned_cols=67 Identities=19% Similarity=0.221 Sum_probs=54.6
Q ss_pred CCCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe-----------------CC-C-CCcEEEEecchHHHHHHHhhcCCC
Q 042171 3 LKLKKTIEIGVFTGYSLFLTALTIPEDGQITAID-----------------AR-V-DHKINFIESEALSVLDQLLKDSEN 63 (125)
Q Consensus 3 ~~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD-----------------~~-~-~~~i~~~~gd~~~~l~~~~~~~~~ 63 (125)
.+|++||-||-|.|..+..+++..+ ..+|+.+| .+ + .+|++++.+|+...+.. .
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~-v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~------~ 154 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKN-VESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQ------T 154 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTT-CCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSC------S
T ss_pred CCCCeEEEECCCchHHHHHHHHcCC-cceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhh------c
Confidence 4689999999999999999998654 57899999 12 2 46899999999988643 2
Q ss_pred CCceeEEEEcCCC
Q 042171 64 EVNFDYAFMDADK 76 (125)
Q Consensus 64 ~~~fD~v~id~~~ 76 (125)
.++||+|++|...
T Consensus 155 ~~~yDvIi~D~~d 167 (294)
T 3o4f_A 155 SQTFDVIISDCTD 167 (294)
T ss_dssp SCCEEEEEESCCC
T ss_pred cccCCEEEEeCCC
Confidence 5789999999764
No 270
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=97.85 E-value=1.4e-05 Score=59.15 Aligned_cols=46 Identities=17% Similarity=0.083 Sum_probs=35.4
Q ss_pred CCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe----------CCCC--CcEEEEecchHHH
Q 042171 5 LKKTIEIGVFTGYSLFLTALTIPEDGQITAID----------ARVD--HKINFIESEALSV 53 (125)
Q Consensus 5 ~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD----------~~~~--~~i~~~~gd~~~~ 53 (125)
..+|||||||+|+.|. +++ .+ ..+|+++| ..+. ++++++++|+.+.
T Consensus 22 ~~~VLEIG~G~G~lt~-l~~-~~-~~~v~avEid~~~~~~a~~~~~~~~~v~~i~~D~~~~ 79 (252)
T 1qyr_A 22 GQAMVEIGPGLAALTE-PVG-ER-LDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTF 79 (252)
T ss_dssp TCCEEEECCTTTTTHH-HHH-TT-CSCEEEECCCHHHHHHHHTCTTTGGGEEEECSCGGGC
T ss_pred cCEEEEECCCCcHHHH-hhh-CC-CCeEEEEECCHHHHHHHHHHhccCCceEEEECchhhC
Confidence 4589999999999999 654 22 34599999 2222 4899999999874
No 271
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.81 E-value=3.5e-05 Score=53.09 Aligned_cols=58 Identities=9% Similarity=0.001 Sum_probs=42.4
Q ss_pred CCEEEEEcCccc-HHHHHHHhhCCCCCEEEEEe-CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEEE
Q 042171 5 LKKTIEIGVFTG-YSLFLTALTIPEDGQITAID-ARVDHKINFIESEALSVLDQLLKDSENEVNFDYAFM 72 (125)
Q Consensus 5 ~~~vLeiG~g~G-~~t~~la~~~~~~~~v~~iD-~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~i 72 (125)
+.+|||||||+| ..+.+|++.. +..|+++| ....-. ++.+|..+-...+ -..||+|+.
T Consensus 36 ~~rVlEVG~G~g~~vA~~La~~~--g~~V~atDInp~Av~--~v~dDiF~P~~~~------Y~~~DLIYs 95 (153)
T 2k4m_A 36 GTRVVEVGAGRFLYVSDYIRKHS--KVDLVLTDIKPSHGG--IVRDDITSPRMEI------YRGAALIYS 95 (153)
T ss_dssp SSEEEEETCTTCCHHHHHHHHHS--CCEEEEECSSCSSTT--EECCCSSSCCHHH------HTTEEEEEE
T ss_pred CCcEEEEccCCChHHHHHHHHhC--CCeEEEEECCccccc--eEEccCCCCcccc------cCCcCEEEE
Confidence 569999999999 5999999853 57899999 322212 8889987643322 147999963
No 272
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=97.79 E-value=4.2e-06 Score=61.96 Aligned_cols=31 Identities=26% Similarity=0.149 Sum_probs=23.4
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID 36 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD 36 (125)
++.+|||||||+|..++.+++ .+ ..+|+++|
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~-~~-~~~v~gvD 101 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSAC-SH-FEDITMTD 101 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGG-GG-CSEEEEEC
T ss_pred CCCeEEEECCCcChHHHHhhc-cC-CCeEEEeC
Confidence 467999999999995444433 22 57999999
No 273
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=97.79 E-value=2.4e-05 Score=57.00 Aligned_cols=31 Identities=23% Similarity=0.146 Sum_probs=27.0
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID 36 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD 36 (125)
+..+|||||||+|..+.++++. + ..+|+++|
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~-g-~~~V~gvD 67 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQN-G-AKLVYALD 67 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-T-CSEEEEEC
T ss_pred CCCEEEEEccCCCHHHHHHHhc-C-CCEEEEEc
Confidence 3469999999999999999987 3 35999999
No 274
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=97.70 E-value=1.5e-05 Score=56.53 Aligned_cols=58 Identities=21% Similarity=0.306 Sum_probs=42.9
Q ss_pred CCEEEEEcCcccHHHHHHHhhCCCCCEEEEEeCC-------CCCcEEEEecchHHHHHHHhhcCCCCCceeEEEEcCCC
Q 042171 5 LKKTIEIGVFTGYSLFLTALTIPEDGQITAIDAR-------VDHKINFIESEALSVLDQLLKDSENEVNFDYAFMDADK 76 (125)
Q Consensus 5 ~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD~~-------~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~id~~~ 76 (125)
..+|||||||+|..+..+++. +++|.. -..+++++.+|+.+. + + ..++||+|++....
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~-------~~vD~s~~~~~~a~~~~~~~~~~d~~~~-~-~-----~~~~fD~v~~~~~l 112 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK-------IGVEPSERMAEIARKRGVFVLKGTAENL-P-L-----KDESFDFALMVTTI 112 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC-------EEEESCHHHHHHHHHTTCEEEECBTTBC-C-S-----CTTCEEEEEEESCG
T ss_pred CCcEEEeCCCCCHHHHHHHHH-------hccCCCHHHHHHHHhcCCEEEEcccccC-C-C-----CCCCeeEEEEcchH
Confidence 578999999999999988654 899910 011688999998654 3 2 24689999987653
No 275
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=97.67 E-value=2.7e-05 Score=65.38 Aligned_cols=67 Identities=10% Similarity=-0.056 Sum_probs=47.3
Q ss_pred CCEEEEEcCcccHHHHHHHhhC---C---------CCCEEEEEe--------------CCCCCcEEEEecchHHHHHHHh
Q 042171 5 LKKTIEIGVFTGYSLFLTALTI---P---------EDGQITAID--------------ARVDHKINFIESEALSVLDQLL 58 (125)
Q Consensus 5 ~~~vLeiG~g~G~~t~~la~~~---~---------~~~~v~~iD--------------~~~~~~i~~~~gd~~~~l~~~~ 58 (125)
.+.|||||||+|......+++. + ...+|+||| .++.++|++++||+.++-....
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev~lp~~ 489 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSLPGIAK 489 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGHHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhcccccc
Confidence 4579999999999975433332 1 235999999 4678899999999998722111
Q ss_pred hcCCCCCceeEEEEc
Q 042171 59 KDSENEVNFDYAFMD 73 (125)
Q Consensus 59 ~~~~~~~~fD~v~id 73 (125)
.. ..++.|+|++.
T Consensus 490 ~~--~~ekVDIIVSE 502 (745)
T 3ua3_A 490 DR--GFEQPDIIVSE 502 (745)
T ss_dssp HT--TCCCCSEEEEC
T ss_pred cC--CCCcccEEEEe
Confidence 10 13689999974
No 276
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.66 E-value=0.00024 Score=55.59 Aligned_cols=68 Identities=19% Similarity=0.244 Sum_probs=53.1
Q ss_pred CCCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe------------CC------C----CCcEEEEecchHHHHHHHhhc
Q 042171 3 LKLKKTIEIGVFTGYSLFLTALTIPEDGQITAID------------AR------V----DHKINFIESEALSVLDQLLKD 60 (125)
Q Consensus 3 ~~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD------------~~------~----~~~i~~~~gd~~~~l~~~~~~ 60 (125)
..|++||-||-|.|..+..+++. + ..+|+.+| .+ + .+|++++.+|+.+.+......
T Consensus 204 ~~pkrVLIIGgGdG~~~revlkh-~-~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~ 281 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVKL-K-PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKE 281 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTT-C-CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHH
T ss_pred CCCCeEEEECCCcHHHHHHHHhc-C-CceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhc
Confidence 35789999999999999998875 4 37899999 11 1 246999999999988754322
Q ss_pred CCCCCceeEEEEcCC
Q 042171 61 SENEVNFDYAFMDAD 75 (125)
Q Consensus 61 ~~~~~~fD~v~id~~ 75 (125)
.++||+|++|..
T Consensus 282 ---~~~yDvIIvDl~ 293 (381)
T 3c6k_A 282 ---GREFDYVINDLT 293 (381)
T ss_dssp ---TCCEEEEEEECC
T ss_pred ---cCceeEEEECCC
Confidence 467999999963
No 277
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.60 E-value=0.00012 Score=54.34 Aligned_cols=70 Identities=9% Similarity=0.064 Sum_probs=52.8
Q ss_pred CCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---CCC----------CCcEEEEec-chHHHHHHHhhcCCCCCceeEE
Q 042171 5 LKKTIEIGVFTGYSLFLTALTIPEDGQITAID---ARV----------DHKINFIES-EALSVLDQLLKDSENEVNFDYA 70 (125)
Q Consensus 5 ~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---~~~----------~~~i~~~~g-d~~~~l~~~~~~~~~~~~fD~v 70 (125)
...|||+||++|-|+-+.+...+ ..+|+++| .+. .+.|+|+.+ |.... + ..++|.|
T Consensus 79 g~~VvDLGaapGGWSq~~a~~~g-~~~V~avdvG~~ghe~P~~~~s~gwn~v~fk~gvDv~~~-~--------~~~~Dtl 148 (267)
T 3p8z_A 79 EGRVIDLGCGRGGWSYYCAGLKK-VTEVRGYTKGGPGHEEPVPMSTYGWNIVKLMSGKDVFYL-P--------PEKCDTL 148 (267)
T ss_dssp CEEEEEESCTTSHHHHHHHTSTT-EEEEEEECCCSTTSCCCCCCCCTTTTSEEEECSCCGGGC-C--------CCCCSEE
T ss_pred CCEEEEcCCCCCcHHHHHHHhcC-CCEEEEEecCCCCccCcchhhhcCcCceEEEeccceeec-C--------CccccEE
Confidence 34899999999999999888765 45899999 111 157999999 87433 2 3679999
Q ss_pred EEcCCCcCCHHHHh
Q 042171 71 FMDADKDNYCNYMR 84 (125)
Q Consensus 71 ~id~~~~~~~~~~~ 84 (125)
++|.....-.+..+
T Consensus 149 lcDIgeSs~~~~vE 162 (267)
T 3p8z_A 149 LCDIGESSPSPTVE 162 (267)
T ss_dssp EECCCCCCSCHHHH
T ss_pred EEecCCCCCChhhh
Confidence 99998865444444
No 278
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=97.55 E-value=0.00021 Score=55.45 Aligned_cols=64 Identities=9% Similarity=-0.019 Sum_probs=50.9
Q ss_pred CCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------------CC-----CCCcEEEEecchHHHHHHHhhcCCCC
Q 042171 5 LKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------------AR-----VDHKINFIESEALSVLDQLLKDSENE 64 (125)
Q Consensus 5 ~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------------~~-----~~~~i~~~~gd~~~~l~~~~~~~~~~ 64 (125)
..+|||+|++.|-=|+.||...+ +++|+++| .+ ...++.+...|+...-+.. .
T Consensus 149 g~~VLD~CAaPGGKT~~la~~~~-~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~------~ 221 (359)
T 4fzv_A 149 GDIVLDLCAAPGGKTLALLQTGC-CRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELE------G 221 (359)
T ss_dssp TEEEEESSCTTCHHHHHHHHTTC-EEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHS------T
T ss_pred CCEEEEecCCccHHHHHHHHhcC-CCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhc------c
Confidence 35899999999999999998765 68999999 12 2357999999998763322 4
Q ss_pred CceeEEEEcCC
Q 042171 65 VNFDYAFMDAD 75 (125)
Q Consensus 65 ~~fD~v~id~~ 75 (125)
+.||.|++|+.
T Consensus 222 ~~fD~VLlDaP 232 (359)
T 4fzv_A 222 DTYDRVLVDVP 232 (359)
T ss_dssp TCEEEEEEECC
T ss_pred ccCCEEEECCc
Confidence 78999999964
No 279
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.52 E-value=3.1e-05 Score=57.82 Aligned_cols=65 Identities=12% Similarity=0.114 Sum_probs=46.9
Q ss_pred CCCEEEEEcCcccHHHHHHHhh--CCC-CCEEEEEe---CCCC---Cc---EEEEec-chHHHHHHHhhcCCCCCceeEE
Q 042171 4 KLKKTIEIGVFTGYSLFLTALT--IPE-DGQITAID---ARVD---HK---INFIES-EALSVLDQLLKDSENEVNFDYA 70 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~--~~~-~~~v~~iD---~~~~---~~---i~~~~g-d~~~~l~~~~~~~~~~~~fD~v 70 (125)
+..+|||+||++|.|+.+.++. ++. .|.++++| .++. .. +++++| |..+. +..++|+|
T Consensus 73 pg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~~~~~~Gv~~i~~~~G~Df~~~---------~~~~~DvV 143 (269)
T 2px2_A 73 PIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPMLMQSYGWNIVTMKSGVDVFYK---------PSEISDTL 143 (269)
T ss_dssp CCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCGGGS---------CCCCCSEE
T ss_pred CCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCCcccCCCceEEEeeccCCccCC---------CCCCCCEE
Confidence 3458999999999999999997 432 36677777 3332 22 466668 88762 13589999
Q ss_pred EEcCCCc
Q 042171 71 FMDADKD 77 (125)
Q Consensus 71 ~id~~~~ 77 (125)
++|.+..
T Consensus 144 LSDMAPn 150 (269)
T 2px2_A 144 LCDIGES 150 (269)
T ss_dssp EECCCCC
T ss_pred EeCCCCC
Confidence 9999874
No 280
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=97.47 E-value=0.0002 Score=53.87 Aligned_cols=50 Identities=16% Similarity=0.362 Sum_probs=36.8
Q ss_pred CCCEEEEEcCcc--cHHHHHHHhhCCCCCEEEEEe-------------CCC-CCcEEEEecchHHH
Q 042171 4 KLKKTIEIGVFT--GYSLFLTALTIPEDGQITAID-------------ARV-DHKINFIESEALSV 53 (125)
Q Consensus 4 ~~~~vLeiG~g~--G~~t~~la~~~~~~~~v~~iD-------------~~~-~~~i~~~~gd~~~~ 53 (125)
...+|||||||+ +..+..+++..-++++|+++| .+. ..+++++++|..+.
T Consensus 78 g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~ 143 (277)
T 3giw_A 78 GIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDP 143 (277)
T ss_dssp CCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCH
T ss_pred CCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccCh
Confidence 457999999997 445566666543389999999 111 24799999999875
No 281
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=97.45 E-value=0.00016 Score=60.43 Aligned_cols=99 Identities=13% Similarity=0.016 Sum_probs=64.2
Q ss_pred CCEEEEEcCcccHHHHHHHhhC---C--------------------------------------CCCEEEEEe-------
Q 042171 5 LKKTIEIGVFTGYSLFLTALTI---P--------------------------------------EDGQITAID------- 36 (125)
Q Consensus 5 ~~~vLeiG~g~G~~t~~la~~~---~--------------------------------------~~~~v~~iD------- 36 (125)
...|||.+||+|..++.+|... + ...+|+++|
T Consensus 191 ~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~av~ 270 (703)
T 3v97_A 191 GTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQ 270 (703)
T ss_dssp TSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHHHH
T ss_pred CCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHHHHH
Confidence 4589999999999999877642 1 126899999
Q ss_pred --------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEEEcCCCcCCHHHHhhhCCCCCCcchHHHHHHHHHHhhc
Q 042171 37 --------ARVDHKINFIESEALSVLDQLLKDSENEVNFDYAFMDADKDNYCNYMREQVPDHFRGSSKQAILDLNRSLVD 108 (125)
Q Consensus 37 --------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 108 (125)
+|+.+.|++.++|+.+..+.. ..++||+|++ +|+|=+.. . .......-++.+.+.++.
T Consensus 271 ~A~~N~~~agv~~~i~~~~~D~~~~~~~~-----~~~~~d~Iv~------NPPYG~Rl-g--~~~~l~~ly~~l~~~lk~ 336 (703)
T 3v97_A 271 RARTNARLAGIGELITFEVKDVAQLTNPL-----PKGPYGTVLS------NPPYGERL-D--SEPALIALHSLLGRIMKN 336 (703)
T ss_dssp HHHHHHHHTTCGGGEEEEECCGGGCCCSC-----TTCCCCEEEE------CCCCCC------CCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCceEEEECChhhCcccc-----ccCCCCEEEe------CCCccccc-c--chhHHHHHHHHHHHHHHh
Confidence 788888999999998752211 1237999997 45552200 0 011133445556666654
Q ss_pred -CCCeEEEEe
Q 042171 109 -DPCVQLSHV 117 (125)
Q Consensus 109 -~~~~~~~~l 117 (125)
.|+++..++
T Consensus 337 ~~~g~~~~il 346 (703)
T 3v97_A 337 QFGGWNLSLF 346 (703)
T ss_dssp HCTTCEEEEE
T ss_pred hCCCCeEEEE
Confidence 567766665
No 282
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=97.45 E-value=0.00019 Score=53.94 Aligned_cols=65 Identities=14% Similarity=0.161 Sum_probs=43.6
Q ss_pred CCEEEEEcCcccHHHHHHHhhCCCCCEEEEEeCC-------CC-----CcEEEEecchHHHHHHHhhcCCCCCceeEEEE
Q 042171 5 LKKTIEIGVFTGYSLFLTALTIPEDGQITAIDAR-------VD-----HKINFIESEALSVLDQLLKDSENEVNFDYAFM 72 (125)
Q Consensus 5 ~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD~~-------~~-----~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~i 72 (125)
..+|||+|||+|.|+-.+++..+ ...++++|-+ .. .++..+.+++. ... + ..++||+|++
T Consensus 75 ~~~VLDLGaAPGGWSQvAa~~~~-~~~v~g~dVGvDl~~~pi~~~~~g~~ii~~~~~~d-v~~-l-----~~~~~DlVls 146 (277)
T 3evf_A 75 EGRVIDLGCGRGGWCYYAAAQKE-VSGVKGFTLGRDGHEKPMNVQSLGWNIITFKDKTD-IHR-L-----EPVKCDTLLC 146 (277)
T ss_dssp CEEEEEETCTTCHHHHHHHTSTT-EEEEEEECCCCTTCCCCCCCCBTTGGGEEEECSCC-TTT-S-----CCCCCSEEEE
T ss_pred CCEEEEecCCCCHHHHHHHHhcC-CCcceeEEEeccCcccccccCcCCCCeEEEeccce-ehh-c-----CCCCccEEEe
Confidence 45899999999999999888654 4567777711 11 13444555542 211 2 2578999999
Q ss_pred cCCCc
Q 042171 73 DADKD 77 (125)
Q Consensus 73 d~~~~ 77 (125)
|.+..
T Consensus 147 D~apn 151 (277)
T 3evf_A 147 DIGES 151 (277)
T ss_dssp CCCCC
T ss_pred cCccC
Confidence 98775
No 283
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=97.44 E-value=0.00019 Score=59.48 Aligned_cols=73 Identities=15% Similarity=0.130 Sum_probs=52.6
Q ss_pred CCCEEEEEcCcccHHHHHHHhhC-------CC----CCEEEEEe-------------C---------------------C
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTI-------PE----DGQITAID-------------A---------------------R 38 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~-------~~----~~~v~~iD-------------~---------------------~ 38 (125)
++-+|+|+|.|+|++.+.+.++. |. ..+++++| . +
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 34589999999999999887754 11 25789999 0 1
Q ss_pred -----CCC---cEEEEecchHHHHHHHhhcCCCCCceeEEEEcCCCcC
Q 042171 39 -----VDH---KINFIESEALSVLDQLLKDSENEVNFDYAFMDADKDN 78 (125)
Q Consensus 39 -----~~~---~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~id~~~~~ 78 (125)
+.+ +++++.||+.+.++++... ....+|.+|+|+....
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~--~~~~~da~flD~f~p~ 183 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTLLPTLDDS--LNNQVDAWFLDGFAPA 183 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHHGGGCCGG--GTTCEEEEEECSSCC-
T ss_pred ceEEEecCCcEEEEEEccCHHHHHhhcccc--cCCceeEEEECCCCCC
Confidence 111 5788999999998876311 1367999999987543
No 284
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=97.37 E-value=0.00064 Score=51.81 Aligned_cols=74 Identities=14% Similarity=0.190 Sum_probs=49.9
Q ss_pred CEEEEEcCcccHHHHHHHh---hCCCCCE--EEEEeC------C--------------------CCC--cEEEEecchHH
Q 042171 6 KKTIEIGVFTGYSLFLTAL---TIPEDGQ--ITAIDA------R--------------------VDH--KINFIESEALS 52 (125)
Q Consensus 6 ~~vLeiG~g~G~~t~~la~---~~~~~~~--v~~iD~------~--------------------~~~--~i~~~~gd~~~ 52 (125)
-+|||+|-|||++++...+ ...+..+ .+++|. . -.. .+++..||+.+
T Consensus 98 ~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa~~ 177 (308)
T 3vyw_A 98 IRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDARK 177 (308)
T ss_dssp EEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCHHH
T ss_pred cEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechHHH
Confidence 4799999999998765433 2233454 577770 0 012 35678999999
Q ss_pred HHHHHhhcCCCCCceeEEEEcCC-CcCCHHHHh
Q 042171 53 VLDQLLKDSENEVNFDYAFMDAD-KDNYCNYMR 84 (125)
Q Consensus 53 ~l~~~~~~~~~~~~fD~v~id~~-~~~~~~~~~ 84 (125)
.++.+. ..+||++|.|+- .+.+|+.|.
T Consensus 178 ~l~~l~-----~~~~Da~flDgFsP~kNPeLWs 205 (308)
T 3vyw_A 178 RIKEVE-----NFKADAVFHDAFSPYKNPELWT 205 (308)
T ss_dssp HGGGCC-----SCCEEEEEECCSCTTTSGGGGS
T ss_pred HHhhhc-----ccceeEEEeCCCCcccCcccCC
Confidence 988762 357999999985 455666555
No 285
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.36 E-value=0.00048 Score=51.89 Aligned_cols=65 Identities=11% Similarity=0.101 Sum_probs=43.0
Q ss_pred CCEEEEEcCcccHHHHHHHhhCCCCCEEEEEeCC-------C-----CCcEEEEecchHHHHHHHhhcCCCCCceeEEEE
Q 042171 5 LKKTIEIGVFTGYSLFLTALTIPEDGQITAIDAR-------V-----DHKINFIESEALSVLDQLLKDSENEVNFDYAFM 72 (125)
Q Consensus 5 ~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD~~-------~-----~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~i 72 (125)
..+|||+||++|.|+..+++..+ ...|+++|-+ + ..++.....++. .. .+ ..+++|+|++
T Consensus 91 ~~~VLDLGaAPGGWsQvAa~~~g-v~sV~GvdvG~d~~~~pi~~~~~g~~ii~~~~~~d-v~-~l-----~~~~~DvVLS 162 (282)
T 3gcz_A 91 TGIVVDLGCGRGGWSYYAASLKN-VKKVMAFTLGVQGHEKPIMRTTLGWNLIRFKDKTD-VF-NM-----EVIPGDTLLC 162 (282)
T ss_dssp CEEEEEETCTTCHHHHHHHTSTT-EEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCC-GG-GS-----CCCCCSEEEE
T ss_pred CCEEEEeCCCCCHHHHHHHHhcC-CCeeeeEEeccCccccccccccCCCceEEeeCCcc-hh-hc-----CCCCcCEEEe
Confidence 45899999999999999998665 4578888821 1 112233332221 11 12 2578999999
Q ss_pred cCCCc
Q 042171 73 DADKD 77 (125)
Q Consensus 73 d~~~~ 77 (125)
|.+..
T Consensus 163 DmApn 167 (282)
T 3gcz_A 163 DIGES 167 (282)
T ss_dssp CCCCC
T ss_pred cCccC
Confidence 99875
No 286
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=97.34 E-value=0.00086 Score=50.59 Aligned_cols=69 Identities=7% Similarity=0.015 Sum_probs=53.3
Q ss_pred CCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe----------CCCC-CcEEEEecchHHHHHHHhhcCCCCCceeEEEEc
Q 042171 5 LKKTIEIGVFTGYSLFLTALTIPEDGQITAID----------ARVD-HKINFIESEALSVLDQLLKDSENEVNFDYAFMD 73 (125)
Q Consensus 5 ~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD----------~~~~-~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~id 73 (125)
...+||.+||.|.-|..|++. +++|+++| . +. +++++++++..++-..+... ...++|.|+.|
T Consensus 23 gg~~VD~T~G~GGHS~~il~~---~g~VigiD~Dp~Ai~~A~~-L~~~rv~lv~~~f~~l~~~L~~~--g~~~vDgIL~D 96 (285)
T 1wg8_A 23 GGVYVDATLGGAGHARGILER---GGRVIGLDQDPEAVARAKG-LHLPGLTVVQGNFRHLKRHLAAL--GVERVDGILAD 96 (285)
T ss_dssp TCEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHH-TCCTTEEEEESCGGGHHHHHHHT--TCSCEEEEEEE
T ss_pred CCEEEEeCCCCcHHHHHHHHC---CCEEEEEeCCHHHHHHHHh-hccCCEEEEECCcchHHHHHHHc--CCCCcCEEEeC
Confidence 458999999999999999997 68999999 2 33 48999999998763323211 13579999998
Q ss_pred CCCcCC
Q 042171 74 ADKDNY 79 (125)
Q Consensus 74 ~~~~~~ 79 (125)
-..+++
T Consensus 97 LGvSS~ 102 (285)
T 1wg8_A 97 LGVSSF 102 (285)
T ss_dssp CSCCHH
T ss_pred Cccccc
Confidence 776544
No 287
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.30 E-value=0.00026 Score=53.90 Aligned_cols=70 Identities=10% Similarity=0.079 Sum_probs=50.5
Q ss_pred CCEEEEEcCcccHHHHHHHhhCCCCCEEEEEeCCC------------C-CcEEEEec-chHHHHHHHhhcCCCCCceeEE
Q 042171 5 LKKTIEIGVFTGYSLFLTALTIPEDGQITAIDARV------------D-HKINFIES-EALSVLDQLLKDSENEVNFDYA 70 (125)
Q Consensus 5 ~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD~~~------------~-~~i~~~~g-d~~~~l~~~~~~~~~~~~fD~v 70 (125)
...|||+||++|-|+-+.+...+ ..+|+++|-|- . .-|+++++ |.... + ..++|+|
T Consensus 95 ~~~VlDLGaapGGwsq~~~~~~g-v~~V~avdvG~~~he~P~~~~ql~w~lV~~~~~~Dv~~l-~--------~~~~D~i 164 (321)
T 3lkz_A 95 VGKVIDLGCGRGGWCYYMATQKR-VQEVRGYTKGGPGHEEPQLVQSYGWNIVTMKSGVDVFYR-P--------SECCDTL 164 (321)
T ss_dssp CEEEEEETCTTCHHHHHHTTCTT-EEEEEEECCCSTTSCCCCCCCBTTGGGEEEECSCCTTSS-C--------CCCCSEE
T ss_pred CCEEEEeCCCCCcHHHHHHhhcC-CCEEEEEEcCCCCccCcchhhhcCCcceEEEeccCHhhC-C--------CCCCCEE
Confidence 34899999999999998887765 35799999111 1 34888888 66433 2 3679999
Q ss_pred EEcCCCcCCHHHHh
Q 042171 71 FMDADKDNYCNYMR 84 (125)
Q Consensus 71 ~id~~~~~~~~~~~ 84 (125)
++|.+...-.+..+
T Consensus 165 vcDigeSs~~~~ve 178 (321)
T 3lkz_A 165 LCDIGESSSSAEVE 178 (321)
T ss_dssp EECCCCCCSCHHHH
T ss_pred EEECccCCCChhhh
Confidence 99988655444444
No 288
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=97.29 E-value=8.5e-05 Score=58.67 Aligned_cols=61 Identities=11% Similarity=0.090 Sum_probs=46.7
Q ss_pred CCEEEEEcCcccHHHHHHHhhCC------------CCCEEEEEe---------------CCCCC-cEEEEecchHHHHHH
Q 042171 5 LKKTIEIGVFTGYSLFLTALTIP------------EDGQITAID---------------ARVDH-KINFIESEALSVLDQ 56 (125)
Q Consensus 5 ~~~vLeiG~g~G~~t~~la~~~~------------~~~~v~~iD---------------~~~~~-~i~~~~gd~~~~l~~ 56 (125)
..+|||.|||+|..++.+++.+. ...+++++| .++.. ++.++++|+.....
T Consensus 172 ~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~l~~~~- 250 (445)
T 2okc_A 172 GETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDSLEKEP- 250 (445)
T ss_dssp TCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECCTTTSCC-
T ss_pred CCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCCCCCcc-
Confidence 35899999999999999988752 146799999 45532 67889999875421
Q ss_pred HhhcCCCCCceeEEEEc
Q 042171 57 LLKDSENEVNFDYAFMD 73 (125)
Q Consensus 57 ~~~~~~~~~~fD~v~id 73 (125)
..+||+|+.+
T Consensus 251 -------~~~fD~Iv~N 260 (445)
T 2okc_A 251 -------STLVDVILAN 260 (445)
T ss_dssp -------SSCEEEEEEC
T ss_pred -------cCCcCEEEEC
Confidence 3589999986
No 289
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.05 E-value=0.0019 Score=49.96 Aligned_cols=74 Identities=16% Similarity=0.115 Sum_probs=56.5
Q ss_pred CCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------CCC-CCcEEEEecchHHHHHHHhhcCCCCCceeEEEEcC
Q 042171 5 LKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------ARV-DHKINFIESEALSVLDQLLKDSENEVNFDYAFMDA 74 (125)
Q Consensus 5 ~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------~~~-~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~id~ 74 (125)
...+||..+|.|.-|..|+++++++|+|+++| ..+ .+|+++++++..++...+... +-.+++|.|+.|-
T Consensus 58 ggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~rL~~~Rv~lv~~nF~~l~~~L~~~-g~~~~vDgILfDL 136 (347)
T 3tka_A 58 DGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKTIDDPRFSIIHGPFSALGEYVAER-DLIGKIDGILLDL 136 (347)
T ss_dssp TCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHTTCCCTTEEEEESCGGGHHHHHHHT-TCTTCEEEEEEEC
T ss_pred CCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHHhc-CCCCcccEEEECC
Confidence 35789999999999999999997789999999 222 468999999988764444221 1113699999998
Q ss_pred CCcCC
Q 042171 75 DKDNY 79 (125)
Q Consensus 75 ~~~~~ 79 (125)
..+++
T Consensus 137 GVSS~ 141 (347)
T 3tka_A 137 GVSSP 141 (347)
T ss_dssp SCCHH
T ss_pred ccCHH
Confidence 77543
No 290
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=96.99 E-value=0.0016 Score=53.00 Aligned_cols=65 Identities=12% Similarity=0.039 Sum_probs=49.6
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCC--CCEEEEEe---------------CCCC-CcEEEEecchHHH-HHHHhhcCCCC
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPE--DGQITAID---------------ARVD-HKINFIESEALSV-LDQLLKDSENE 64 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~--~~~v~~iD---------------~~~~-~~i~~~~gd~~~~-l~~~~~~~~~~ 64 (125)
...+|+|.+||+|...+.+++.+.. ..+++++| .++. +++.+..+|.+.. +|.. ..
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~~-----~~ 295 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQ-----EP 295 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCS-----SC
T ss_pred CCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceeccccccc-----cc
Confidence 3459999999999999999998742 57899999 4554 4788999998754 1221 24
Q ss_pred CceeEEEEc
Q 042171 65 VNFDYAFMD 73 (125)
Q Consensus 65 ~~fD~v~id 73 (125)
.+||+|+.+
T Consensus 296 ~~fD~IvaN 304 (542)
T 3lkd_A 296 TNFDGVLMN 304 (542)
T ss_dssp CCBSEEEEC
T ss_pred ccccEEEec
Confidence 689999974
No 291
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=96.97 E-value=0.00082 Score=54.59 Aligned_cols=63 Identities=6% Similarity=-0.067 Sum_probs=47.0
Q ss_pred CCEEEEEcCcccHHHHHHHhhCCC-----------------CCEEEEEe---------------CCCCC----cEEEEec
Q 042171 5 LKKTIEIGVFTGYSLFLTALTIPE-----------------DGQITAID---------------ARVDH----KINFIES 48 (125)
Q Consensus 5 ~~~vLeiG~g~G~~t~~la~~~~~-----------------~~~v~~iD---------------~~~~~----~i~~~~g 48 (125)
..+|||.|||+|...+.+++.+.. ..+++++| .++.. ++.++.+
T Consensus 170 ~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~~g 249 (541)
T 2ar0_A 170 REVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIRLG 249 (541)
T ss_dssp TCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEEES
T ss_pred CCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCeEeC
Confidence 358999999999999998887532 13799999 34433 2788999
Q ss_pred chHHHHHHHhhcCCCCCceeEEEEc
Q 042171 49 EALSVLDQLLKDSENEVNFDYAFMD 73 (125)
Q Consensus 49 d~~~~l~~~~~~~~~~~~fD~v~id 73 (125)
|++...+. ...+||+|+.+
T Consensus 250 DtL~~~~~------~~~~fD~Vv~N 268 (541)
T 2ar0_A 250 NTLGSDGE------NLPKAHIVATN 268 (541)
T ss_dssp CTTSHHHH------TSCCEEEEEEC
T ss_pred CCcccccc------cccCCeEEEEC
Confidence 98765322 14679999985
No 292
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=96.96 E-value=0.002 Score=49.18 Aligned_cols=62 Identities=13% Similarity=0.146 Sum_probs=42.2
Q ss_pred CCEEEEEcC------cccHHHHHHHhhCCCCCEEEEEe-CCCC-CcEEEEecchHHHHHHHhhcCCCCCceeEEEEcCCC
Q 042171 5 LKKTIEIGV------FTGYSLFLTALTIPEDGQITAID-ARVD-HKINFIESEALSVLDQLLKDSENEVNFDYAFMDADK 76 (125)
Q Consensus 5 ~~~vLeiG~------g~G~~t~~la~~~~~~~~v~~iD-~~~~-~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~id~~~ 76 (125)
..+|||+|+ .+|.+ .+.+..|+++.|+++| .++. +.-.+++||+.+.. ...+||+|++|.+.
T Consensus 110 gmrVLDLGA~s~kg~APGS~--VLr~~~p~g~~VVavDL~~~~sda~~~IqGD~~~~~--------~~~k~DLVISDMAP 179 (344)
T 3r24_A 110 NMRVIHFGAGSDKGVAPGTA--VLRQWLPTGTLLVDSDLNDFVSDADSTLIGDCATVH--------TANKWDLIISDMYD 179 (344)
T ss_dssp TCEEEEESCCCTTSBCHHHH--HHHHHSCTTCEEEEEESSCCBCSSSEEEESCGGGEE--------ESSCEEEEEECCCC
T ss_pred CCEEEeCCCCCCCCCCCcHH--HHHHhCCCCcEEEEeeCcccccCCCeEEEccccccc--------cCCCCCEEEecCCC
Confidence 459999995 78873 3444456457999999 2221 11245999976531 14789999999775
No 293
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=96.92 E-value=0.0011 Score=51.41 Aligned_cols=47 Identities=6% Similarity=-0.002 Sum_probs=39.3
Q ss_pred CCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe------------CCCCCcEEEEecchHHH
Q 042171 5 LKKTIEIGVFTGYSLFLTALTIPEDGQITAID------------ARVDHKINFIESEALSV 53 (125)
Q Consensus 5 ~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD------------~~~~~~i~~~~gd~~~~ 53 (125)
...|||||.|.|..|..|++... ..+|+++| . ..++++++++|+.++
T Consensus 59 ~~~VlEIGPG~G~LT~~Ll~~~~-~~~vvavE~D~~l~~~L~~~~-~~~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 59 ELKVLDLYPGVGIQSAIFYNKYC-PRQYSLLEKRSSLYKFLNAKF-EGSPLQILKRDPYDW 117 (353)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHC-CSEEEEECCCHHHHHHHHHHT-TTSSCEEECSCTTCH
T ss_pred CCEEEEECCCCCHHHHHHHhhCC-CCEEEEEecCHHHHHHHHHhc-cCCCEEEEECCccch
Confidence 46899999999999999998653 46899999 3 246899999999765
No 294
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=96.66 E-value=0.0038 Score=47.33 Aligned_cols=65 Identities=11% Similarity=0.159 Sum_probs=42.8
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEeCCC------------CCc-EEEEecchHHHHHHHhhcCCCCCceeEE
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAIDARV------------DHK-INFIESEALSVLDQLLKDSENEVNFDYA 70 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD~~~------------~~~-i~~~~gd~~~~l~~~~~~~~~~~~fD~v 70 (125)
+..+|||+||++|.|+-.+++..+ -..|+++|-+. ..+ +++..+ . +.. .+ ..+++|+|
T Consensus 81 ~g~~vlDLGaaPGgWsqva~~~~g-v~sV~Gvdlg~~~~~~P~~~~~~~~~iv~~~~~-~-di~-~l-----~~~~~DlV 151 (300)
T 3eld_A 81 ITGRVLDLGCGRGGWSYYAAAQKE-VMSVKGYTLGIEGHEKPIHMQTLGWNIVKFKDK-S-NVF-TM-----PTEPSDTL 151 (300)
T ss_dssp CCEEEEEETCTTCHHHHHHHTSTT-EEEEEEECCCCTTSCCCCCCCBTTGGGEEEECS-C-CTT-TS-----CCCCCSEE
T ss_pred CCCEEEEcCCCCCHHHHHHHHhcC-CceeeeEEeccccccccccccccCCceEEeecC-c-eee-ec-----CCCCcCEE
Confidence 456899999999999999998764 35688888221 112 233322 1 111 12 14789999
Q ss_pred EEcCCCc
Q 042171 71 FMDADKD 77 (125)
Q Consensus 71 ~id~~~~ 77 (125)
++|.+..
T Consensus 152 lsD~APn 158 (300)
T 3eld_A 152 LCDIGES 158 (300)
T ss_dssp EECCCCC
T ss_pred eecCcCC
Confidence 9998875
No 295
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=96.54 E-value=0.00036 Score=50.97 Aligned_cols=31 Identities=26% Similarity=0.130 Sum_probs=23.1
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID 36 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD 36 (125)
+..+|||||||+|..++.++.. + -.+|+++|
T Consensus 55 ~g~~vLDiGCG~G~~~~~~~~~-~-~~~v~g~D 85 (263)
T 2a14_A 55 QGDTLIDIGSGPTIYQVLAACD-S-FQDITLSD 85 (263)
T ss_dssp CEEEEEESSCTTCCGGGTTGGG-T-EEEEEEEE
T ss_pred CCceEEEeCCCccHHHHHHHHh-h-hcceeecc
Confidence 3468999999999877665543 1 24799999
No 296
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=96.52 E-value=0.00024 Score=57.81 Aligned_cols=63 Identities=10% Similarity=0.127 Sum_probs=45.8
Q ss_pred CCEEEEEcCcccHHHHHHHhhCCC--------------CCEEEEEe---------------CCCCCcEEEEecchHHHHH
Q 042171 5 LKKTIEIGVFTGYSLFLTALTIPE--------------DGQITAID---------------ARVDHKINFIESEALSVLD 55 (125)
Q Consensus 5 ~~~vLeiG~g~G~~t~~la~~~~~--------------~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~ 55 (125)
+.+|||.+||+|...+.+++.+.. ..+++++| .++..++.+..+|.+.. +
T Consensus 245 ~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDtL~~-~ 323 (544)
T 3khk_A 245 KGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNADSFLD-D 323 (544)
T ss_dssp SEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBCCSSSCCTTTS-C
T ss_pred CCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcccceeccchhcC-c
Confidence 348999999999999888765431 35799999 56665666688887654 2
Q ss_pred HHhhcCCCCCceeEEEEc
Q 042171 56 QLLKDSENEVNFDYAFMD 73 (125)
Q Consensus 56 ~~~~~~~~~~~fD~v~id 73 (125)
.. ...+||+|+.+
T Consensus 324 ~~-----~~~~fD~Iv~N 336 (544)
T 3khk_A 324 QH-----PDLRADFVMTN 336 (544)
T ss_dssp SC-----TTCCEEEEEEC
T ss_pred cc-----ccccccEEEEC
Confidence 11 14689999984
No 297
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=96.35 E-value=0.0042 Score=46.81 Aligned_cols=67 Identities=15% Similarity=0.160 Sum_probs=51.4
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe----------CC--CCCcEEEEecchHHHHHHHhhcCCCCCceeEEE
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID----------AR--VDHKINFIESEALSVLDQLLKDSENEVNFDYAF 71 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD----------~~--~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~ 71 (125)
++..+||+=+|||..++.+.+ ...+++.+| .. ..++++++.+|+...+..+.+. ..+||+||
T Consensus 91 n~~~~LDlfaGSGaLgiEaLS---~~d~~vfvE~~~~a~~~L~~Nl~~~~~~~V~~~D~~~~L~~l~~~---~~~fdLVf 164 (283)
T 2oo3_A 91 NLNSTLSYYPGSPYFAINQLR---SQDRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNALLPP---PEKRGLIF 164 (283)
T ss_dssp SSSSSCCEEECHHHHHHHHSC---TTSEEEEECCSHHHHHHHTTSCCTTSCEEEECSCHHHHHHHHCSC---TTSCEEEE
T ss_pred cCCCceeEeCCcHHHHHHHcC---CCCeEEEEeCCHHHHHHHHHHhCcCCcEEEEeCcHHHHHHHhcCC---CCCccEEE
Confidence 355688999999999988666 257899999 22 2468999999999887766422 35799999
Q ss_pred EcCCC
Q 042171 72 MDADK 76 (125)
Q Consensus 72 id~~~ 76 (125)
+|-.-
T Consensus 165 iDPPY 169 (283)
T 2oo3_A 165 IDPSY 169 (283)
T ss_dssp ECCCC
T ss_pred ECCCC
Confidence 99753
No 298
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=96.05 E-value=0.0046 Score=52.83 Aligned_cols=32 Identities=19% Similarity=-0.036 Sum_probs=27.8
Q ss_pred CCEEEEEcCcccHHHHHHHhhCC--CCCEEEEEe
Q 042171 5 LKKTIEIGVFTGYSLFLTALTIP--EDGQITAID 36 (125)
Q Consensus 5 ~~~vLeiG~g~G~~t~~la~~~~--~~~~v~~iD 36 (125)
..+|||.|||+|...+.+++.++ ...+++++|
T Consensus 322 g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvE 355 (878)
T 3s1s_A 322 DEVISDPAAGSGNLLATVSAGFNNVMPRQIWAND 355 (878)
T ss_dssp TCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEEC
T ss_pred CCEEEECCCCccHHHHHHHHHhcccCCCeEEEEE
Confidence 56999999999999999999875 236899999
No 299
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=95.94 E-value=0.012 Score=48.32 Aligned_cols=77 Identities=13% Similarity=0.095 Sum_probs=52.5
Q ss_pred CEEEEEcCcccHHHHHHHhhC-------CC----CCEEEEEe-------------C---------------------CC-
Q 042171 6 KKTIEIGVFTGYSLFLTALTI-------PE----DGQITAID-------------A---------------------RV- 39 (125)
Q Consensus 6 ~~vLeiG~g~G~~t~~la~~~-------~~----~~~v~~iD-------------~---------------------~~- 39 (125)
-+|||+|-|+|++.+...++. |+ .-+++++| . ++
T Consensus 68 ~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 147 (676)
T 3ps9_A 68 FVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGCH 147 (676)
T ss_dssp EEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEEE
T ss_pred eEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCce
Confidence 489999999999999876653 11 24589999 0 10
Q ss_pred -------CCcEEEEecchHHHHHHHhhcCCCCCceeEEEEcCCC-cCCHHHHh
Q 042171 40 -------DHKINFIESEALSVLDQLLKDSENEVNFDYAFMDADK-DNYCNYMR 84 (125)
Q Consensus 40 -------~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~id~~~-~~~~~~~~ 84 (125)
.-++++..||+.+.++++..+ ....||.+|+|+.- +.+++.|.
T Consensus 148 ~~~~~~~~~~l~l~~gd~~~~l~~~~~~--~~~~~d~~~~D~f~p~~np~~w~ 198 (676)
T 3ps9_A 148 RLLLDAGRVTLDLWFGDINELTSQLDDS--LNQKVDAWFLDGFAPAKNPDMWT 198 (676)
T ss_dssp EEEEGGGTEEEEEEESCHHHHGGGBCGG--GTTCEEEEEECCSCGGGCGGGSC
T ss_pred EEEecCCcEEEEEecCCHHHHHHhcccc--cCCcccEEEECCCCCcCChhhhh
Confidence 124668899999998876311 13679999999863 33444433
No 300
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=95.28 E-value=0.018 Score=45.05 Aligned_cols=21 Identities=24% Similarity=0.218 Sum_probs=18.7
Q ss_pred CCEEEEEcCcccHHHHHHHhh
Q 042171 5 LKKTIEIGVFTGYSLFLTALT 25 (125)
Q Consensus 5 ~~~vLeiG~g~G~~t~~la~~ 25 (125)
+-+|+|+||++|..|+.+...
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ 73 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRD 73 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHH
T ss_pred ceEEEecCCCCCchHHHHHHH
Confidence 568999999999999988776
No 301
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=94.81 E-value=0.04 Score=43.06 Aligned_cols=33 Identities=21% Similarity=0.155 Sum_probs=28.2
Q ss_pred CCCEEEEEcCcccHHHHHHH-hhCCCCCEEEEEe
Q 042171 4 KLKKTIEIGVFTGYSLFLTA-LTIPEDGQITAID 36 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la-~~~~~~~~v~~iD 36 (125)
+...++|||++.|..+++++ +..++.++|+++|
T Consensus 226 ~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afE 259 (409)
T 2py6_A 226 DSEKMVDCGASIGESLAGLIGVTKGKFERVWMIE 259 (409)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEEC
T ss_pred CCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEc
Confidence 45689999999999999998 5566458999999
No 302
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=94.23 E-value=0.05 Score=40.41 Aligned_cols=30 Identities=13% Similarity=0.002 Sum_probs=25.9
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID 36 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD 36 (125)
....|||++||+|..++.+++. +.+++++|
T Consensus 235 ~~~~vlD~f~GsGt~~~~a~~~---g~~~~g~e 264 (297)
T 2zig_A 235 VGDVVLDPFAGTGTTLIAAARW---GRRALGVE 264 (297)
T ss_dssp TTCEEEETTCTTTHHHHHHHHT---TCEEEEEE
T ss_pred CCCEEEECCCCCCHHHHHHHHc---CCeEEEEe
Confidence 4568999999999999997764 57899999
No 303
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=93.73 E-value=0.0088 Score=46.38 Aligned_cols=70 Identities=13% Similarity=0.096 Sum_probs=44.6
Q ss_pred CCEEEEEcCcccHHHHHHHhh---------------CCCCCEEEEEe----------CCCCC-----cEEEEecchHHHH
Q 042171 5 LKKTIEIGVFTGYSLFLTALT---------------IPEDGQITAID----------ARVDH-----KINFIESEALSVL 54 (125)
Q Consensus 5 ~~~vLeiG~g~G~~t~~la~~---------------~~~~~~v~~iD----------~~~~~-----~i~~~~gd~~~~l 54 (125)
+-+|+|+||++|..|+.+... -++.-+|+..| ..+.. +-.++.|......
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSFy 131 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFY 131 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSS
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhhh
Confidence 457899999999999876655 23357888999 12221 3355555544321
Q ss_pred HHHhhcCCCCCceeEEEEcCCCcC
Q 042171 55 DQLLKDSENEVNFDYAFMDADKDN 78 (125)
Q Consensus 55 ~~~~~~~~~~~~fD~v~id~~~~~ 78 (125)
..+- +.+++|+||+..+.++
T Consensus 132 ~rlf----p~~S~d~v~Ss~aLHW 151 (359)
T 1m6e_X 132 GRLF----PRNTLHFIHSSYSLMW 151 (359)
T ss_dssp SCCS----CTTCBSCEEEESCTTB
T ss_pred hccC----CCCceEEEEehhhhhh
Confidence 1221 2689999999876543
No 304
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=92.70 E-value=0.8 Score=31.72 Aligned_cols=70 Identities=11% Similarity=0.107 Sum_probs=53.2
Q ss_pred CCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe-------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEEEcCCCc
Q 042171 5 LKKTIEIGVFTGYSLFLTALTIPEDGQITAID-------ARVDHKINFIESEALSVLDQLLKDSENEVNFDYAFMDADKD 77 (125)
Q Consensus 5 ~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD-------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~id~~~~ 77 (125)
+.-|||+|-|.|-.=-.|.+.+| +-+|+.+| +-..+.-.++.||+.+.+|....-. ..+.-++..|-...
T Consensus 41 ~GpVlElGLGNGRTydHLRe~~P-~R~I~vfDR~~~~hp~~~P~~e~~ilGdi~~tL~~~~~r~--g~~a~LaHaD~G~g 117 (174)
T 3iht_A 41 SGPVYELGLGNGRTYHHLRQHVQ-GREIYVFERAVASHPDSTPPEAQLILGDIRETLPATLERF--GATASLVHADLGGH 117 (174)
T ss_dssp CSCEEEECCTTCHHHHHHHHHCC-SSCEEEEESSCCCCGGGCCCGGGEEESCHHHHHHHHHHHH--CSCEEEEEECCCCS
T ss_pred CCceEEecCCCChhHHHHHHhCC-CCcEEEEEeeeccCCCCCCchHheecccHHHHHHHHHHhc--CCceEEEEeecCCC
Confidence 56799999999999999999998 79999999 2233455689999999988742110 35677888776543
No 305
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=92.61 E-value=0.031 Score=37.69 Aligned_cols=61 Identities=10% Similarity=-0.100 Sum_probs=32.9
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEeCCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEEEcCC
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAIDARVDHKINFIESEALSVLDQLLKDSENEVNFDYAFMDAD 75 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~id~~ 75 (125)
...+|||||||... +-+...+-+.++ .....+++++.+|+.+. +.. . -+.++||+|++...
T Consensus 12 ~g~~vL~~~~g~v~--vD~s~~ml~~a~-----~~~~~~~~~~~~d~~~~-~~~-~--~~~~~fD~V~~~~~ 72 (176)
T 2ld4_A 12 AGQFVAVVWDKSSP--VEALKGLVDKLQ-----ALTGNEGRVSVENIKQL-LQS-A--HKESSFDIILSGLV 72 (176)
T ss_dssp TTSEEEEEECTTSC--HHHHHHHHHHHH-----HHTTTTSEEEEEEGGGG-GGG-C--CCSSCEEEEEECCS
T ss_pred CCCEEEEecCCcee--eeCCHHHHHHHH-----HhcccCcEEEEechhcC-ccc-c--CCCCCEeEEEECCh
Confidence 35699999998732 111111000000 01223588999999865 320 0 01578999998543
No 306
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=91.41 E-value=0.092 Score=40.81 Aligned_cols=32 Identities=13% Similarity=0.094 Sum_probs=24.5
Q ss_pred CCEEEEEcCcccHHHHHHHh--------hC------CCCCEEEEEe
Q 042171 5 LKKTIEIGVFTGYSLFLTAL--------TI------PEDGQITAID 36 (125)
Q Consensus 5 ~~~vLeiG~g~G~~t~~la~--------~~------~~~~~v~~iD 36 (125)
+-+|+|+||++|..|+.++. .. ++.-+|.--|
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nD 98 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSD 98 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEE
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecC
Confidence 56899999999999998732 21 2357888888
No 307
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=89.54 E-value=0.11 Score=41.95 Aligned_cols=65 Identities=9% Similarity=-0.001 Sum_probs=43.2
Q ss_pred CCEEEEEcCcccHHHHHHHhhCCC------------CCEEEEEe---------------CCCCCcEEEEecchHHHHHHH
Q 042171 5 LKKTIEIGVFTGYSLFLTALTIPE------------DGQITAID---------------ARVDHKINFIESEALSVLDQL 57 (125)
Q Consensus 5 ~~~vLeiG~g~G~~t~~la~~~~~------------~~~v~~iD---------------~~~~~~i~~~~gd~~~~l~~~ 57 (125)
..+|+|-+||||...+...+.+.. ...++++| .+. +.-.+..+|.+.. |..
T Consensus 218 ~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~-~~~~I~~~dtL~~-~~~ 295 (530)
T 3ufb_A 218 GESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGL-EYPRIDPENSLRF-PLR 295 (530)
T ss_dssp TCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTC-SCCEEECSCTTCS-CGG
T ss_pred CCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCC-ccccccccccccC-chh
Confidence 458999999999999988776532 24699999 344 2345677887643 111
Q ss_pred hhcCCCCCceeEEEEc
Q 042171 58 LKDSENEVNFDYAFMD 73 (125)
Q Consensus 58 ~~~~~~~~~fD~v~id 73 (125)
.. .+..+||+|+.+
T Consensus 296 -~~-~~~~~fD~Il~N 309 (530)
T 3ufb_A 296 -EM-GDKDRVDVILTN 309 (530)
T ss_dssp -GC-CGGGCBSEEEEC
T ss_pred -hh-cccccceEEEec
Confidence 00 123579999974
No 308
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=88.61 E-value=0.74 Score=34.76 Aligned_cols=31 Identities=26% Similarity=0.257 Sum_probs=25.4
Q ss_pred CCEEEEEcCcc-cHHHHHHHhhCCCCCEEEEEe
Q 042171 5 LKKTIEIGVFT-GYSLFLTALTIPEDGQITAID 36 (125)
Q Consensus 5 ~~~vLeiG~g~-G~~t~~la~~~~~~~~v~~iD 36 (125)
.++||.+|+|. |..++.+|++.+ -.+|+++|
T Consensus 191 g~~VlV~GaG~vG~~a~qlak~~G-a~~Vi~~~ 222 (371)
T 1f8f_A 191 ASSFVTWGAGAVGLSALLAAKVCG-ASIIIAVD 222 (371)
T ss_dssp TCEEEEESCSHHHHHHHHHHHHHT-CSEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEC
Confidence 46899999886 889999999874 23799998
No 309
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=87.33 E-value=1.1 Score=34.22 Aligned_cols=32 Identities=13% Similarity=-0.071 Sum_probs=26.3
Q ss_pred CCCEEEEEcCcc-cHHHHHHHhhCCCCCEEEEEe
Q 042171 4 KLKKTIEIGVFT-GYSLFLTALTIPEDGQITAID 36 (125)
Q Consensus 4 ~~~~vLeiG~g~-G~~t~~la~~~~~~~~v~~iD 36 (125)
...+||.+|+|. |..++.+|++.+ -.+|+++|
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~ 217 (398)
T 2dph_A 185 PGSHVYIAGAGPVGRCAAAGARLLG-AACVIVGD 217 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEc
Confidence 346899999987 889999999874 23899998
No 310
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=86.32 E-value=2 Score=31.89 Aligned_cols=31 Identities=16% Similarity=0.072 Sum_probs=26.1
Q ss_pred CCCEEEEEcCcc-cHHHHHHHhhCCCCCEEEEEe
Q 042171 4 KLKKTIEIGVFT-GYSLFLTALTIPEDGQITAID 36 (125)
Q Consensus 4 ~~~~vLeiG~g~-G~~t~~la~~~~~~~~v~~iD 36 (125)
..++||-+|+|. |..++.+|++.+ .+|+++|
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~ 197 (340)
T 3s2e_A 166 PGQWVVISGIGGLGHVAVQYARAMG--LRVAAVD 197 (340)
T ss_dssp TTSEEEEECCSTTHHHHHHHHHHTT--CEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC--CeEEEEe
Confidence 456899999875 999999999874 6999998
No 311
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=85.76 E-value=1 Score=33.70 Aligned_cols=32 Identities=22% Similarity=0.170 Sum_probs=25.3
Q ss_pred CCCEEEEEcCcc-cHHHHHHHhhCCCCCEEEEEe
Q 042171 4 KLKKTIEIGVFT-GYSLFLTALTIPEDGQITAID 36 (125)
Q Consensus 4 ~~~~vLeiG~g~-G~~t~~la~~~~~~~~v~~iD 36 (125)
...+||-+|+|. |..++.+|++.+ -.+|+++|
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~ 198 (352)
T 3fpc_A 166 LGDTVCVIGIGPVGLMSVAGANHLG-AGRIFAVG 198 (352)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHTTT-CSSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcC-CcEEEEEC
Confidence 356899999876 888889998874 23899999
No 312
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=85.68 E-value=0.71 Score=35.01 Aligned_cols=65 Identities=12% Similarity=0.102 Sum_probs=43.5
Q ss_pred CCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe----------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEEEcC
Q 042171 5 LKKTIEIGVFTGYSLFLTALTIPEDGQITAID----------ARVDHKINFIESEALSVLDQLLKDSENEVNFDYAFMDA 74 (125)
Q Consensus 5 ~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD----------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~id~ 74 (125)
+.+|+|+-||.|..++.+.++--+--.|+++| ..+ ....++.+|..+..+.... ...+|+|+.+-
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~-~~~~~~~~Di~~~~~~~~~----~~~~D~l~~gp 76 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNF-PHTQLLAKTIEGITLEEFD----RLSFDMILMSP 76 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHC-TTSCEECSCGGGCCHHHHH----HHCCSEEEECC
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhc-cccccccCCHHHccHhHcC----cCCcCEEEEcC
Confidence 45899999999999999988621012589999 222 2345778898876432110 12699999863
No 313
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=85.65 E-value=1.9 Score=31.72 Aligned_cols=67 Identities=15% Similarity=0.160 Sum_probs=47.2
Q ss_pred CCCCEEEEEcCcccHHHHHHHhhCC-CCCEEEEEeC---CCC---------------CcEEEEecchHHH--HHHHhhcC
Q 042171 3 LKLKKTIEIGVFTGYSLFLTALTIP-EDGQITAIDA---RVD---------------HKINFIESEALSV--LDQLLKDS 61 (125)
Q Consensus 3 ~~~~~vLeiG~g~G~~t~~la~~~~-~~~~v~~iD~---~~~---------------~~i~~~~gd~~~~--l~~~~~~~ 61 (125)
.+.++||-.| |+|+.+..+++.+- .+.+|++++. +.. .+++++.+|..+. +..+
T Consensus 23 ~~~~~vlVtG-atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~---- 97 (351)
T 3ruf_A 23 FSPKTWLITG-VAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQV---- 97 (351)
T ss_dssp HSCCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHH----
T ss_pred CCCCeEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHH----
Confidence 4567899888 46888888888763 3578999981 110 5799999998753 2332
Q ss_pred CCCCceeEEEEcCCC
Q 042171 62 ENEVNFDYAFMDADK 76 (125)
Q Consensus 62 ~~~~~fD~v~id~~~ 76 (125)
-..+|.||.-++.
T Consensus 98 --~~~~d~Vih~A~~ 110 (351)
T 3ruf_A 98 --MKGVDHVLHQAAL 110 (351)
T ss_dssp --TTTCSEEEECCCC
T ss_pred --hcCCCEEEECCcc
Confidence 2469999987764
No 314
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=85.39 E-value=2 Score=31.93 Aligned_cols=32 Identities=19% Similarity=0.185 Sum_probs=26.4
Q ss_pred CCCEEEEEcCcc-cHHHHHHHhhCCCCCEEEEEe
Q 042171 4 KLKKTIEIGVFT-GYSLFLTALTIPEDGQITAID 36 (125)
Q Consensus 4 ~~~~vLeiG~g~-G~~t~~la~~~~~~~~v~~iD 36 (125)
...+||-+|+|. |..++.+|++.+ ..+|+++|
T Consensus 171 ~g~~vlv~GaG~vG~~a~qla~~~g-~~~Vi~~~ 203 (345)
T 3jv7_A 171 PGSTAVVIGVGGLGHVGIQILRAVS-AARVIAVD 203 (345)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHC-CCEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEc
Confidence 346899999875 888899999875 57999998
No 315
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=84.82 E-value=1.2 Score=32.13 Aligned_cols=30 Identities=7% Similarity=0.011 Sum_probs=25.2
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID 36 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD 36 (125)
+...|||..||+|..++...+. +.+++++|
T Consensus 212 ~~~~vlD~f~GsGtt~~~a~~~---gr~~ig~e 241 (260)
T 1g60_A 212 PNDLVLDCFMGSGTTAIVAKKL---GRNFIGCD 241 (260)
T ss_dssp TTCEEEESSCTTCHHHHHHHHT---TCEEEEEE
T ss_pred CCCEEEECCCCCCHHHHHHHHc---CCeEEEEe
Confidence 4568999999999999887764 57899998
No 316
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=84.51 E-value=2.5 Score=31.68 Aligned_cols=32 Identities=22% Similarity=0.218 Sum_probs=25.8
Q ss_pred CCCEEEEEcCcc-cHHHHHHHhhCCCCCEEEEEe
Q 042171 4 KLKKTIEIGVFT-GYSLFLTALTIPEDGQITAID 36 (125)
Q Consensus 4 ~~~~vLeiG~g~-G~~t~~la~~~~~~~~v~~iD 36 (125)
...+||-+|+|. |..++.+|++.+ -.+|+++|
T Consensus 171 ~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~ 203 (356)
T 1pl8_A 171 LGHKVLVCGAGPIGMVTLLVAKAMG-AAQVVVTD 203 (356)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEC
Confidence 346899999875 888999999874 23899998
No 317
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=84.01 E-value=1.8 Score=33.36 Aligned_cols=65 Identities=9% Similarity=-0.023 Sum_probs=43.7
Q ss_pred CEEEEEcCcccHHHHHHHhhCCCCCE-EEEEe----------CCCCCcEEEEecchHHHHHH-HhhcCCCCCceeEEEEc
Q 042171 6 KKTIEIGVFTGYSLFLTALTIPEDGQ-ITAID----------ARVDHKINFIESEALSVLDQ-LLKDSENEVNFDYAFMD 73 (125)
Q Consensus 6 ~~vLeiG~g~G~~t~~la~~~~~~~~-v~~iD----------~~~~~~i~~~~gd~~~~l~~-~~~~~~~~~~fD~v~id 73 (125)
-+++|+-||.|-.++-+.++ +.+ +.++| ..+ ....++.+|..+..+. +.........+|+|+.+
T Consensus 3 ~~vidLFsG~GGlslG~~~a---G~~~v~avE~d~~a~~t~~~N~-~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~gg 78 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARA---GFDVKMAVEIDQHAINTHAINF-PRSLHVQEDVSLLNAEIIKGFFKNDMPIDGIIGG 78 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHH---TCEEEEEECSCHHHHHHHHHHC-TTSEEECCCGGGCCHHHHHHHHCSCCCCCEEEEC
T ss_pred CeEEEEccCcCHHHHHHHHC---CCcEEEEEeCCHHHHHHHHHhC-CCCceEecChhhcCHHHHHhhcccCCCeeEEEec
Confidence 47999999999999999887 454 67999 223 3467788888765322 10000013579999986
Q ss_pred C
Q 042171 74 A 74 (125)
Q Consensus 74 ~ 74 (125)
.
T Consensus 79 p 79 (376)
T 3g7u_A 79 P 79 (376)
T ss_dssp C
T ss_pred C
Confidence 4
No 318
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=82.85 E-value=8.3 Score=28.39 Aligned_cols=67 Identities=15% Similarity=0.110 Sum_probs=42.2
Q ss_pred CCEEEEEcCcc-cHHHHHHHhhCCCCCEEEEEe-----------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEEE
Q 042171 5 LKKTIEIGVFT-GYSLFLTALTIPEDGQITAID-----------ARVDHKINFIESEALSVLDQLLKDSENEVNFDYAFM 72 (125)
Q Consensus 5 ~~~vLeiG~g~-G~~t~~la~~~~~~~~v~~iD-----------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~i 72 (125)
..+||-+|+|. |..++.+++... +.+|+++| .+...-+.....|..+.+..+. ....+|.++.
T Consensus 164 g~~VlV~GaG~~g~~a~~~a~~~~-g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~~~~~~~~v~~~t----~g~g~d~~~~ 238 (348)
T 4eez_A 164 GDWQVIFGAGGLGNLAIQYAKNVF-GAKVIAVDINQDKLNLAKKIGADVTINSGDVNPVDEIKKIT----GGLGVQSAIV 238 (348)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTS-CCEEEEEESCHHHHHHHHHTTCSEEEEC-CCCHHHHHHHHT----TSSCEEEEEE
T ss_pred CCEEEEEcCCCccHHHHHHHHHhC-CCEEEEEECcHHHhhhhhhcCCeEEEeCCCCCHHHHhhhhc----CCCCceEEEE
Confidence 46899999876 456666777665 68999999 3333334445556655554442 1346888887
Q ss_pred cCCC
Q 042171 73 DADK 76 (125)
Q Consensus 73 d~~~ 76 (125)
+...
T Consensus 239 ~~~~ 242 (348)
T 4eez_A 239 CAVA 242 (348)
T ss_dssp CCSC
T ss_pred eccC
Confidence 6544
No 319
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=81.72 E-value=4.3 Score=30.79 Aligned_cols=32 Identities=13% Similarity=-0.003 Sum_probs=25.5
Q ss_pred CCCEEEEEcCcc-cHHHHHHHhhCCCCCEEEEEe
Q 042171 4 KLKKTIEIGVFT-GYSLFLTALTIPEDGQITAID 36 (125)
Q Consensus 4 ~~~~vLeiG~g~-G~~t~~la~~~~~~~~v~~iD 36 (125)
...+||-+|+|. |..++.+|++.+ -.+|+++|
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlAk~~G-a~~Vi~~~ 217 (398)
T 1kol_A 185 PGSTVYVAGAGPVGLAAAASARLLG-AAVVIVGD 217 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCC-CCeEEEEc
Confidence 346899999866 888999999875 23799998
No 320
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=81.28 E-value=1.7 Score=32.84 Aligned_cols=32 Identities=9% Similarity=-0.124 Sum_probs=25.4
Q ss_pred CCCEEEEEcCcc-cHHHHHHHhhCCCCCEEEEEe
Q 042171 4 KLKKTIEIGVFT-GYSLFLTALTIPEDGQITAID 36 (125)
Q Consensus 4 ~~~~vLeiG~g~-G~~t~~la~~~~~~~~v~~iD 36 (125)
...+||-+|+|. |..++.+|++.+ -.+|++++
T Consensus 182 ~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~ 214 (370)
T 4ej6_A 182 AGSTVAILGGGVIGLLTVQLARLAG-ATTVILST 214 (370)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEC
Confidence 346899999876 888889999875 24899998
No 321
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=81.20 E-value=1.1 Score=33.01 Aligned_cols=29 Identities=14% Similarity=0.121 Sum_probs=22.8
Q ss_pred CcEEEEecchHHHHHHHhhcCCCCCceeEEEEcC
Q 042171 41 HKINFIESEALSVLDQLLKDSENEVNFDYAFMDA 74 (125)
Q Consensus 41 ~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~id~ 74 (125)
.++++++||+.+.++.+ +.++||+|++|-
T Consensus 20 ~~~~i~~gD~~~~l~~l-----~~~s~DlIvtdP 48 (297)
T 2zig_A 20 GVHRLHVGDAREVLASF-----PEASVHLVVTSP 48 (297)
T ss_dssp -CEEEEESCHHHHHTTS-----CTTCEEEEEECC
T ss_pred cCCEEEECcHHHHHhhC-----CCCceeEEEECC
Confidence 46899999999987655 257899999863
No 322
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=80.07 E-value=1.5 Score=32.90 Aligned_cols=30 Identities=10% Similarity=0.210 Sum_probs=24.2
Q ss_pred CcEEEEecchHHHHHHHhhcCCCCCceeEEEEcCC
Q 042171 41 HKINFIESEALSVLDQLLKDSENEVNFDYAFMDAD 75 (125)
Q Consensus 41 ~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~id~~ 75 (125)
++.++++||+.+.++.+ +.++||+||+|-.
T Consensus 13 ~~~~ii~gD~~~~l~~l-----~~~svDlI~tDPP 42 (323)
T 1boo_A 13 SNGSMYIGDSLELLESF-----PEESISLVMTSPP 42 (323)
T ss_dssp SSEEEEESCHHHHGGGS-----CSSCEEEEEECCC
T ss_pred CCceEEeCcHHHHHhhC-----CCCCeeEEEECCC
Confidence 56889999999887755 2578999999843
No 323
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=79.91 E-value=2.3 Score=31.11 Aligned_cols=70 Identities=14% Similarity=0.136 Sum_probs=44.2
Q ss_pred CCCCCEEEEEcCcccHHHHHHHhhCCCC---CEEEEEe-CC----------C--CCcEEEEecchHHH--HHHHhhcCCC
Q 042171 2 RLKLKKTIEIGVFTGYSLFLTALTIPED---GQITAID-AR----------V--DHKINFIESEALSV--LDQLLKDSEN 63 (125)
Q Consensus 2 ~~~~~~vLeiG~g~G~~t~~la~~~~~~---~~v~~iD-~~----------~--~~~i~~~~gd~~~~--l~~~~~~~~~ 63 (125)
+.+.++||-.| |+|+.+..+++.+-.. .+|++++ .. + ..+++++.+|..+. +..+..
T Consensus 21 ~~~~~~vlVtG-atG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~---- 95 (346)
T 4egb_A 21 QSNAMNILVTG-GAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIK---- 95 (346)
T ss_dssp ---CEEEEEET-TTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHH----
T ss_pred ccCCCeEEEEC-CccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHh----
Confidence 34566899888 5688888888776322 5888888 11 1 14799999998753 222221
Q ss_pred CCceeEEEEcCCC
Q 042171 64 EVNFDYAFMDADK 76 (125)
Q Consensus 64 ~~~fD~v~id~~~ 76 (125)
...+|.|+.-++.
T Consensus 96 ~~~~d~Vih~A~~ 108 (346)
T 4egb_A 96 ERDVQVIVNFAAE 108 (346)
T ss_dssp HHTCCEEEECCCC
T ss_pred hcCCCEEEECCcc
Confidence 1348999976653
No 324
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=79.63 E-value=3.9 Score=30.78 Aligned_cols=31 Identities=23% Similarity=0.197 Sum_probs=24.6
Q ss_pred CCEEEEEcCcc-cHHHHHHHhhCCCCCEEEEEe
Q 042171 5 LKKTIEIGVFT-GYSLFLTALTIPEDGQITAID 36 (125)
Q Consensus 5 ~~~vLeiG~g~-G~~t~~la~~~~~~~~v~~iD 36 (125)
..+||-+|+|. |..++.+|++.+ -.+|+++|
T Consensus 196 g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~ 227 (376)
T 1e3i_A 196 GSTCAVFGLGCVGLSAIIGCKIAG-ASRIIAID 227 (376)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT-CSEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEc
Confidence 46899999864 888888999874 23899998
No 325
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=79.55 E-value=6.5 Score=29.44 Aligned_cols=74 Identities=12% Similarity=0.031 Sum_probs=43.9
Q ss_pred CCCEEEEEcCcc-cHHHHHHHhhCCCCCEEEEEe-----------CCCCCcEEEEe-cchHHHHHHHhhcCCCCCceeEE
Q 042171 4 KLKKTIEIGVFT-GYSLFLTALTIPEDGQITAID-----------ARVDHKINFIE-SEALSVLDQLLKDSENEVNFDYA 70 (125)
Q Consensus 4 ~~~~vLeiG~g~-G~~t~~la~~~~~~~~v~~iD-----------~~~~~~i~~~~-gd~~~~l~~~~~~~~~~~~fD~v 70 (125)
...+||-+|+|. |..++.+|++.+ .+|++++ .|...-+. .. .+..+.+..+. ....+|+|
T Consensus 189 ~g~~VlV~G~G~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~~lGa~~vi~-~~~~~~~~~v~~~~----~g~g~D~v 261 (363)
T 3uog_A 189 AGDRVVVQGTGGVALFGLQIAKATG--AEVIVTSSSREKLDRAFALGADHGIN-RLEEDWVERVYALT----GDRGADHI 261 (363)
T ss_dssp TTCEEEEESSBHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHTCSEEEE-TTTSCHHHHHHHHH----TTCCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEecCchhHHHHHHcCCCEEEc-CCcccHHHHHHHHh----CCCCceEE
Confidence 346899999875 888888998874 6999999 23321122 11 23333333332 13479999
Q ss_pred EEcCCCcCCHHHHh
Q 042171 71 FMDADKDNYCNYMR 84 (125)
Q Consensus 71 ~id~~~~~~~~~~~ 84 (125)
|--.........++
T Consensus 262 id~~g~~~~~~~~~ 275 (363)
T 3uog_A 262 LEIAGGAGLGQSLK 275 (363)
T ss_dssp EEETTSSCHHHHHH
T ss_pred EECCChHHHHHHHH
Confidence 86555433444444
No 326
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=79.10 E-value=1.3 Score=32.02 Aligned_cols=29 Identities=17% Similarity=0.229 Sum_probs=23.2
Q ss_pred cEEEEecchHHHHHHHhhcCCCCCceeEEEEcCC
Q 042171 42 KINFIESEALSVLDQLLKDSENEVNFDYAFMDAD 75 (125)
Q Consensus 42 ~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~id~~ 75 (125)
..+++.||+.+.+..+. .++||+||+|-.
T Consensus 4 ~~~l~~gD~~~~l~~l~-----~~~vdlI~~DPP 32 (260)
T 1g60_A 4 INKIHQMNCFDFLDQVE-----NKSVQLAVIDPP 32 (260)
T ss_dssp SSSEEECCHHHHHHHSC-----TTCEEEEEECCC
T ss_pred cCeEEechHHHHHHhcc-----ccccCEEEECCC
Confidence 45688999999887762 578999999854
No 327
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=78.88 E-value=5.6 Score=29.97 Aligned_cols=63 Identities=14% Similarity=0.155 Sum_probs=40.9
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe------CCCCCcEEEEecchHH--HHHHHhhcCCCCCceeEEEEcC
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID------ARVDHKINFIESEALS--VLDQLLKDSENEVNFDYAFMDA 74 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD------~~~~~~i~~~~gd~~~--~l~~~~~~~~~~~~fD~v~id~ 74 (125)
+..+||-+|| |..+..+++.+.++..|+..| ..+.+.++.+..|+.+ .+..+. ...|+|+.-.
T Consensus 15 ~~mkilvlGa--G~vG~~~~~~L~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~d~~~l~~~~------~~~DvVi~~~ 85 (365)
T 3abi_A 15 RHMKVLILGA--GNIGRAIAWDLKDEFDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVM------KEFELVIGAL 85 (365)
T ss_dssp -CCEEEEECC--SHHHHHHHHHHTTTSEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHH------TTCSEEEECC
T ss_pred CccEEEEECC--CHHHHHHHHHHhcCCCeEEEEcCHHHHHHHhccCCcEEEecCCHHHHHHHH------hCCCEEEEec
Confidence 4568999998 788888888877677888887 2233445556656543 333332 4689888633
No 328
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=78.86 E-value=4.3 Score=30.48 Aligned_cols=31 Identities=16% Similarity=0.186 Sum_probs=24.5
Q ss_pred CCEEEEEcCcc-cHHHHHHHhhCCCCCEEEEEe
Q 042171 5 LKKTIEIGVFT-GYSLFLTALTIPEDGQITAID 36 (125)
Q Consensus 5 ~~~vLeiG~g~-G~~t~~la~~~~~~~~v~~iD 36 (125)
..+||-+|+|. |..++.+|++.+ -.+|++++
T Consensus 193 g~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~ 224 (374)
T 1cdo_A 193 GSTCAVFGLGAVGLAAVMGCHSAG-AKRIIAVD 224 (374)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT-CSEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEc
Confidence 46899999864 888888999874 23899998
No 329
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=78.77 E-value=3.9 Score=27.62 Aligned_cols=31 Identities=13% Similarity=0.003 Sum_probs=24.0
Q ss_pred CCCEEEEEc--CcccHHHHHHHhhCCCCCEEEEEe
Q 042171 4 KLKKTIEIG--VFTGYSLFLTALTIPEDGQITAID 36 (125)
Q Consensus 4 ~~~~vLeiG--~g~G~~t~~la~~~~~~~~v~~iD 36 (125)
+.++||.+| .|.|..++.+++.. +.+|++++
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~--G~~V~~~~ 70 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMI--GARIYTTA 70 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHH--TCEEEEEE
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHc--CCEEEEEe
Confidence 346899999 46677888887765 47899998
No 330
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=78.54 E-value=2.4 Score=32.03 Aligned_cols=31 Identities=26% Similarity=0.191 Sum_probs=24.8
Q ss_pred CCEEEEEcCcc-cHHHHHHHhhCCCCCEEEEEe
Q 042171 5 LKKTIEIGVFT-GYSLFLTALTIPEDGQITAID 36 (125)
Q Consensus 5 ~~~vLeiG~g~-G~~t~~la~~~~~~~~v~~iD 36 (125)
..+||-+|+|. |..++.+|++.+ -.+|+++|
T Consensus 194 g~~VlV~GaG~vG~~a~q~a~~~G-a~~Vi~~~ 225 (378)
T 3uko_A 194 GSNVAIFGLGTVGLAVAEGAKTAG-ASRIIGID 225 (378)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHHT-CSCEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEc
Confidence 46899999864 888889999874 24899998
No 331
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=78.51 E-value=4.2 Score=30.55 Aligned_cols=31 Identities=16% Similarity=0.206 Sum_probs=24.6
Q ss_pred CCEEEEEcCcc-cHHHHHHHhhCCCCCEEEEEe
Q 042171 5 LKKTIEIGVFT-GYSLFLTALTIPEDGQITAID 36 (125)
Q Consensus 5 ~~~vLeiG~g~-G~~t~~la~~~~~~~~v~~iD 36 (125)
..+||-+|+|. |..++.+|++.+ -.+|++++
T Consensus 192 g~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~ 223 (374)
T 2jhf_A 192 GSTCAVFGLGGVGLSVIMGCKAAG-AARIIGVD 223 (374)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT-CSEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEc
Confidence 46899999865 888888998874 23899998
No 332
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=78.33 E-value=3.1 Score=30.86 Aligned_cols=31 Identities=6% Similarity=-0.030 Sum_probs=25.2
Q ss_pred CCCEEEEEcCc--ccHHHHHHHhhCCCCCEEEEEe
Q 042171 4 KLKKTIEIGVF--TGYSLFLTALTIPEDGQITAID 36 (125)
Q Consensus 4 ~~~~vLeiG~g--~G~~t~~la~~~~~~~~v~~iD 36 (125)
+.++||-+|+| .|..++.++++. +.+|++++
T Consensus 144 ~g~~VlV~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~ 176 (340)
T 3gms_A 144 RNDVLLVNACGSAIGHLFAQLSQIL--NFRLIAVT 176 (340)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHH--TCEEEEEE
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHc--CCEEEEEe
Confidence 35689999876 788888888876 47999998
No 333
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=78.31 E-value=3.2 Score=31.18 Aligned_cols=31 Identities=13% Similarity=0.168 Sum_probs=24.5
Q ss_pred CCEEEEEcCcc-cHHHHHHHhhCCCCCEEEEEe
Q 042171 5 LKKTIEIGVFT-GYSLFLTALTIPEDGQITAID 36 (125)
Q Consensus 5 ~~~vLeiG~g~-G~~t~~la~~~~~~~~v~~iD 36 (125)
..+||-+|+|. |..++.+|++.+ ..+|+++|
T Consensus 192 g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~ 223 (373)
T 1p0f_A 192 GSTCAVFGLGGVGFSAIVGCKAAG-ASRIIGVG 223 (373)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHT-CSEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEC
Confidence 46899999864 888888998874 23899998
No 334
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=77.76 E-value=2.3 Score=32.03 Aligned_cols=57 Identities=11% Similarity=-0.028 Sum_probs=39.2
Q ss_pred CCEEEEEcCcccHHHHHHHhhCCCCC-EEEEEe----------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEEEc
Q 042171 5 LKKTIEIGVFTGYSLFLTALTIPEDG-QITAID----------ARVDHKINFIESEALSVLDQLLKDSENEVNFDYAFMD 73 (125)
Q Consensus 5 ~~~vLeiG~g~G~~t~~la~~~~~~~-~v~~iD----------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~id 73 (125)
..+++|+.||+|..++-+.++ +. .+.++| ..+.... .+|..+..+.. -..+|+|+.+
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~a---G~~~v~~~e~d~~a~~t~~~N~~~~~---~~Di~~~~~~~------~~~~D~l~~g 78 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESC---GAECVYSNEWDKYAQEVYEMNFGEKP---EGDITQVNEKT------IPDHDILCAG 78 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHT---TCEEEEEECCCHHHHHHHHHHHSCCC---BSCGGGSCGGG------SCCCSEEEEE
T ss_pred CCcEEEECCCcCHHHHHHHHC---CCeEEEEEeCCHHHHHHHHHHcCCCC---cCCHHHcCHhh------CCCCCEEEEC
Confidence 468999999999999998875 34 478899 1121111 67877654321 2469999986
No 335
>2q2k_A Hypothetical protein; protein-DNA, partition, segregation, PARB, DNA binding protein/DNA complex; HET: DNA 5IU EPE; 3.00A {Staphylococcus aureus}
Probab=77.74 E-value=1.8 Score=24.61 Aligned_cols=35 Identities=17% Similarity=0.334 Sum_probs=23.9
Q ss_pred CCcCCHHHHh--hhCCCCCCc-chHHHHHHHHHHhhcC
Q 042171 75 DKDNYCNYMR--EQVPDHFRG-SSKQAILDLNRSLVDD 109 (125)
Q Consensus 75 ~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~l~~~ 109 (125)
.+..|++.|+ +|+|...+. ...+++|+|.+.|-..
T Consensus 32 kkedypqifdflenvprgtktahirealrryieeigen 69 (70)
T 2q2k_A 32 KKEDYPQIFDFLENVPRGTKTAHIREALRRYIEEIGEN 69 (70)
T ss_dssp ETTTSHHHHHHHTTSCTTCHHHHHHHHHHHHHHHCC--
T ss_pred hhhhchHHHHHHHcCCCccchHHHHHHHHHHHHHhccC
Confidence 4678999887 678876544 3667788888776543
No 336
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=76.57 E-value=4 Score=31.16 Aligned_cols=31 Identities=6% Similarity=0.012 Sum_probs=24.4
Q ss_pred CCEEEEEcCcc-cHHHHHHHhhCCCCCEEEEEe
Q 042171 5 LKKTIEIGVFT-GYSLFLTALTIPEDGQITAID 36 (125)
Q Consensus 5 ~~~vLeiG~g~-G~~t~~la~~~~~~~~v~~iD 36 (125)
..+||-+|+|. |..++.+|++.+ -.+|+++|
T Consensus 214 g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~ 245 (404)
T 3ip1_A 214 GDNVVILGGGPIGLAAVAILKHAG-ASKVILSE 245 (404)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT-CSEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEC
Confidence 45899999865 788888898875 24899998
No 337
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=75.92 E-value=19 Score=25.76 Aligned_cols=70 Identities=9% Similarity=0.049 Sum_probs=46.1
Q ss_pred CCCCEEEEEcCcccHHHHHHHhhC-CCCCEEEEEe----------CCCCCcEEEEecchHHH--HHHHhhcCCCCCceeE
Q 042171 3 LKLKKTIEIGVFTGYSLFLTALTI-PEDGQITAID----------ARVDHKINFIESEALSV--LDQLLKDSENEVNFDY 69 (125)
Q Consensus 3 ~~~~~vLeiG~g~G~~t~~la~~~-~~~~~v~~iD----------~~~~~~i~~~~gd~~~~--l~~~~~~~~~~~~fD~ 69 (125)
.+.+.+|-.|++. ..+..+++.+ ..+.+|+.++ ..+..++.++..|..+. +..+... -+.+|.
T Consensus 14 l~gk~vlVTGas~-gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---~~~iD~ 89 (291)
T 3rd5_A 14 FAQRTVVITGANS-GLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADG---VSGADV 89 (291)
T ss_dssp CTTCEEEEECCSS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHT---CCCEEE
T ss_pred CCCCEEEEeCCCC-hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHh---cCCCCE
Confidence 4567888888764 4555666654 3367899998 33456899999887653 3333321 257999
Q ss_pred EEEcCCC
Q 042171 70 AFMDADK 76 (125)
Q Consensus 70 v~id~~~ 76 (125)
++..+..
T Consensus 90 lv~nAg~ 96 (291)
T 3rd5_A 90 LINNAGI 96 (291)
T ss_dssp EEECCCC
T ss_pred EEECCcC
Confidence 9988763
No 338
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=74.76 E-value=9.5 Score=28.30 Aligned_cols=31 Identities=16% Similarity=0.084 Sum_probs=24.9
Q ss_pred CCCEEEEEcCcc-cHHHHHHHhhCCCCCEEEEEe
Q 042171 4 KLKKTIEIGVFT-GYSLFLTALTIPEDGQITAID 36 (125)
Q Consensus 4 ~~~~vLeiG~g~-G~~t~~la~~~~~~~~v~~iD 36 (125)
...+||-+|+|. |..++.+|++.+ .+|++++
T Consensus 168 ~g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~ 199 (352)
T 1e3j_A 168 LGTTVLVIGAGPIGLVSVLAAKAYG--AFVVCTA 199 (352)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT--CEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEc
Confidence 346899999875 888888998874 6799998
No 339
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=74.74 E-value=12 Score=25.33 Aligned_cols=65 Identities=14% Similarity=0.133 Sum_probs=45.3
Q ss_pred CCEEEEEcCcccHHHHHHHhhC-CCCCEEEEEe------CCCCCcEEEEecchHHH--HHHHhhcCCCCCceeEEEEcCC
Q 042171 5 LKKTIEIGVFTGYSLFLTALTI-PEDGQITAID------ARVDHKINFIESEALSV--LDQLLKDSENEVNFDYAFMDAD 75 (125)
Q Consensus 5 ~~~vLeiG~g~G~~t~~la~~~-~~~~~v~~iD------~~~~~~i~~~~gd~~~~--l~~~~~~~~~~~~fD~v~id~~ 75 (125)
.++||-.|+ +|..+..+++.+ ..+.+|++++ ..+..+++++.+|..+. +..+. ..+|.|+.-+.
T Consensus 4 m~~ilItGa-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~------~~~d~vi~~a~ 76 (227)
T 3dhn_A 4 VKKIVLIGA-SGFVGSALLNEALNRGFEVTAVVRHPEKIKIENEHLKVKKADVSSLDEVCEVC------KGADAVISAFN 76 (227)
T ss_dssp CCEEEEETC-CHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCCTTEEEECCCTTCHHHHHHHH------TTCSEEEECCC
T ss_pred CCEEEEEcC-CchHHHHHHHHHHHCCCEEEEEEcCcccchhccCceEEEEecCCCHHHHHHHh------cCCCEEEEeCc
Confidence 467888874 588888888776 3357899999 22337899999998753 22321 45899998665
Q ss_pred C
Q 042171 76 K 76 (125)
Q Consensus 76 ~ 76 (125)
.
T Consensus 77 ~ 77 (227)
T 3dhn_A 77 P 77 (227)
T ss_dssp C
T ss_pred C
Confidence 4
No 340
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=74.26 E-value=13 Score=26.81 Aligned_cols=71 Identities=15% Similarity=0.089 Sum_probs=46.8
Q ss_pred CCCCCEEEEEcCcccHHHHHHHhhCC-CCCEEEEEe---CCC-----------CCcEEEEecchHHH--HHHHhhcCCCC
Q 042171 2 RLKLKKTIEIGVFTGYSLFLTALTIP-EDGQITAID---ARV-----------DHKINFIESEALSV--LDQLLKDSENE 64 (125)
Q Consensus 2 ~~~~~~vLeiG~g~G~~t~~la~~~~-~~~~v~~iD---~~~-----------~~~i~~~~gd~~~~--l~~~~~~~~~~ 64 (125)
|...++||-.| |+|..+..+++.+- .+.+|++++ ... ..+++++.+|..+. +..+.. .
T Consensus 2 M~~~~~vlVTG-atG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~ 76 (341)
T 3enk_A 2 MSTKGTILVTG-GAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFD----A 76 (341)
T ss_dssp CCSSCEEEEET-TTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHH----H
T ss_pred CCCCcEEEEec-CCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHh----c
Confidence 44567888887 56888888887763 357899998 111 24688899987643 233321 2
Q ss_pred CceeEEEEcCCCc
Q 042171 65 VNFDYAFMDADKD 77 (125)
Q Consensus 65 ~~fD~v~id~~~~ 77 (125)
..+|.|+..++..
T Consensus 77 ~~~d~vih~A~~~ 89 (341)
T 3enk_A 77 HPITAAIHFAALK 89 (341)
T ss_dssp SCCCEEEECCCCC
T ss_pred cCCcEEEECcccc
Confidence 3699999877653
No 341
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=74.23 E-value=6.9 Score=29.55 Aligned_cols=31 Identities=16% Similarity=0.079 Sum_probs=24.3
Q ss_pred CCEEEEEcCc-ccHHHHHHHhhCCCCCEEEEEe
Q 042171 5 LKKTIEIGVF-TGYSLFLTALTIPEDGQITAID 36 (125)
Q Consensus 5 ~~~vLeiG~g-~G~~t~~la~~~~~~~~v~~iD 36 (125)
..+||-+|+| .|..++.+|++.+ ..+|++++
T Consensus 196 g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~ 227 (380)
T 1vj0_A 196 GKTVVIQGAGPLGLFGVVIARSLG-AENVIVIA 227 (380)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT-BSEEEEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHHcC-CceEEEEc
Confidence 4689999965 4788888898873 25999999
No 342
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=74.03 E-value=3.3 Score=31.10 Aligned_cols=30 Identities=13% Similarity=0.181 Sum_probs=23.9
Q ss_pred CcEEEE-ecchHHHHHHHhhcCCCCCceeEEEEcCC
Q 042171 41 HKINFI-ESEALSVLDQLLKDSENEVNFDYAFMDAD 75 (125)
Q Consensus 41 ~~i~~~-~gd~~~~l~~~~~~~~~~~~fD~v~id~~ 75 (125)
...+++ +||+.+.+..+. .++||+||+|-.
T Consensus 37 ~~~~l~i~gD~l~~L~~l~-----~~svDlI~tDPP 67 (319)
T 1eg2_A 37 TTRHVYDVCDCLDTLAKLP-----DDSVQLIICDPP 67 (319)
T ss_dssp CEEEEEEECCHHHHHHTSC-----TTCEEEEEECCC
T ss_pred ccceEEECCcHHHHHHhCc-----cCCcCEEEECCC
Confidence 457788 999999887652 578999999854
No 343
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=72.67 E-value=13 Score=27.25 Aligned_cols=69 Identities=20% Similarity=0.324 Sum_probs=47.1
Q ss_pred CCCCCEEEEEcCcccHHHHHHHhhCC---CCCEEEEEeC--C------------------CCCcEEEEecchHHH--HHH
Q 042171 2 RLKLKKTIEIGVFTGYSLFLTALTIP---EDGQITAIDA--R------------------VDHKINFIESEALSV--LDQ 56 (125)
Q Consensus 2 ~~~~~~vLeiG~g~G~~t~~la~~~~---~~~~v~~iD~--~------------------~~~~i~~~~gd~~~~--l~~ 56 (125)
..+.++||-.| |+|+.+..+++.+- .+.+|++++. . ...+++++.+|..+. +..
T Consensus 7 ~~~~~~vlVTG-atG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~ 85 (362)
T 3sxp_A 7 ELENQTILITG-GAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRR 85 (362)
T ss_dssp CCTTCEEEEET-TTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHH
T ss_pred hcCCCEEEEEC-CCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHH
Confidence 34567899888 57888888888763 3679999981 1 123568899998753 232
Q ss_pred HhhcCCCCCceeEEEEcCCC
Q 042171 57 LLKDSENEVNFDYAFMDADK 76 (125)
Q Consensus 57 ~~~~~~~~~~fD~v~id~~~ 76 (125)
+ ....+|.|+--++.
T Consensus 86 ~-----~~~~~D~vih~A~~ 100 (362)
T 3sxp_A 86 L-----EKLHFDYLFHQAAV 100 (362)
T ss_dssp H-----TTSCCSEEEECCCC
T ss_pred h-----hccCCCEEEECCcc
Confidence 2 13579999976663
No 344
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=72.46 E-value=8.1 Score=28.43 Aligned_cols=31 Identities=13% Similarity=-0.075 Sum_probs=25.0
Q ss_pred CCCEEEEEc--CcccHHHHHHHhhCCCCCEEEEEe
Q 042171 4 KLKKTIEIG--VFTGYSLFLTALTIPEDGQITAID 36 (125)
Q Consensus 4 ~~~~vLeiG--~g~G~~t~~la~~~~~~~~v~~iD 36 (125)
+.++||-+| .|.|..++.++++. +.+|++++
T Consensus 148 ~g~~vlV~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~ 180 (334)
T 3qwb_A 148 KGDYVLLFAAAGGVGLILNQLLKMK--GAHTIAVA 180 (334)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHT--TCEEEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEe
Confidence 346899999 46788888888886 47999999
No 345
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=72.32 E-value=15 Score=25.60 Aligned_cols=75 Identities=16% Similarity=0.081 Sum_probs=45.4
Q ss_pred CCCCCCEEEEEcCcccHHHHHHHhhC-CCCCEEEEEe-------------CCCCCcEEEEecchHHH--HHHHhhcC-CC
Q 042171 1 MRLKLKKTIEIGVFTGYSLFLTALTI-PEDGQITAID-------------ARVDHKINFIESEALSV--LDQLLKDS-EN 63 (125)
Q Consensus 1 ~~~~~~~vLeiG~g~G~~t~~la~~~-~~~~~v~~iD-------------~~~~~~i~~~~gd~~~~--l~~~~~~~-~~ 63 (125)
|..+.+.+|-.|+..| .+..+++.+ ..+.+|+.++ .....++.++..|..+. +..+.... ..
T Consensus 5 ~~~~~k~vlITGas~g-iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (253)
T 3qiv_A 5 MRFENKVGIVTGSGGG-IGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAE 83 (253)
T ss_dssp CTTTTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred cccCCCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 4567788999997544 455555554 3367899998 11235788888887652 11111100 00
Q ss_pred CCceeEEEEcCCC
Q 042171 64 EVNFDYAFMDADK 76 (125)
Q Consensus 64 ~~~fD~v~id~~~ 76 (125)
.+.+|.++..+..
T Consensus 84 ~g~id~li~~Ag~ 96 (253)
T 3qiv_A 84 FGGIDYLVNNAAI 96 (253)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCCCEEEECCCc
Confidence 2479999988764
No 346
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=72.28 E-value=9.2 Score=28.71 Aligned_cols=32 Identities=13% Similarity=-0.249 Sum_probs=25.2
Q ss_pred CCCCEEEEEcC--cccHHHHHHHhhCCCCCEEEEEe
Q 042171 3 LKLKKTIEIGV--FTGYSLFLTALTIPEDGQITAID 36 (125)
Q Consensus 3 ~~~~~vLeiG~--g~G~~t~~la~~~~~~~~v~~iD 36 (125)
....+||-+|+ +.|..++.+|++.+ .+|+++-
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~G--a~Vi~~~ 196 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSG--YIPIATC 196 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTT--CEEEEEE
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCC--CEEEEEe
Confidence 34568999998 48999999999874 6777765
No 347
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=72.15 E-value=12 Score=27.56 Aligned_cols=31 Identities=6% Similarity=-0.009 Sum_probs=25.7
Q ss_pred CCCEEEEEcC--cccHHHHHHHhhCCCCCEEEEEe
Q 042171 4 KLKKTIEIGV--FTGYSLFLTALTIPEDGQITAID 36 (125)
Q Consensus 4 ~~~~vLeiG~--g~G~~t~~la~~~~~~~~v~~iD 36 (125)
..++||-+|+ |.|..++.++++. +.+|++++
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a~~~--G~~Vi~~~ 198 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIAKLF--GARVIATA 198 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHHHHT--TCEEEEEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEe
Confidence 3468999997 7888999999886 46999998
No 348
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=71.88 E-value=12 Score=27.73 Aligned_cols=31 Identities=16% Similarity=-0.027 Sum_probs=25.1
Q ss_pred CCCEEEEEcC--cccHHHHHHHhhCCCCCEEEEEe
Q 042171 4 KLKKTIEIGV--FTGYSLFLTALTIPEDGQITAID 36 (125)
Q Consensus 4 ~~~~vLeiG~--g~G~~t~~la~~~~~~~~v~~iD 36 (125)
..++||.+|+ |.|..++.+++.. +.+|++++
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a~~~--Ga~V~~~~ 201 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYAKAM--GYRVLGID 201 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC--CCcEEEEc
Confidence 3468999998 6788888888876 46999998
No 349
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=71.63 E-value=13 Score=25.80 Aligned_cols=72 Identities=14% Similarity=0.155 Sum_probs=45.8
Q ss_pred CCCCCCEEEEEcCcccHHHHHHHhhC-CCCCEEEEEe-------------CCCCCcEEEEecchHHH------HHHHhhc
Q 042171 1 MRLKLKKTIEIGVFTGYSLFLTALTI-PEDGQITAID-------------ARVDHKINFIESEALSV------LDQLLKD 60 (125)
Q Consensus 1 ~~~~~~~vLeiG~g~G~~t~~la~~~-~~~~~v~~iD-------------~~~~~~i~~~~gd~~~~------l~~~~~~ 60 (125)
|..+.+.+|-.|++.| .+..+++.+ ..+.+|+.++ .....++.++..|..+. +..+..
T Consensus 1 m~l~~k~vlITGas~g-IG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~- 78 (247)
T 3lyl_A 1 MSLNEKVALVTGASRG-IGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKA- 78 (247)
T ss_dssp CTTTTCEEEESSCSSH-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred CCCCCCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH-
Confidence 6677888998886544 455555544 3367899888 11234688888887642 222221
Q ss_pred CCCCCceeEEEEcCCC
Q 042171 61 SENEVNFDYAFMDADK 76 (125)
Q Consensus 61 ~~~~~~fD~v~id~~~ 76 (125)
..+++|.++..+..
T Consensus 79 --~~~~id~li~~Ag~ 92 (247)
T 3lyl_A 79 --ENLAIDILVNNAGI 92 (247)
T ss_dssp --TTCCCSEEEECCCC
T ss_pred --HcCCCCEEEECCCC
Confidence 13579999988764
No 350
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=71.59 E-value=4.8 Score=30.16 Aligned_cols=31 Identities=13% Similarity=0.168 Sum_probs=24.2
Q ss_pred CCEEEEEcCcc-cHHHHHHHhhCCCCCEEEEEe
Q 042171 5 LKKTIEIGVFT-GYSLFLTALTIPEDGQITAID 36 (125)
Q Consensus 5 ~~~vLeiG~g~-G~~t~~la~~~~~~~~v~~iD 36 (125)
..+||-+|+|. |..++.+|++.+ ..+|++++
T Consensus 191 g~~VlV~GaG~vG~~avqla~~~G-a~~Vi~~~ 222 (373)
T 2fzw_A 191 GSVCAVFGLGGVGLAVIMGCKVAG-ASRIIGVD 222 (373)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHT-CSEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEc
Confidence 46899999765 788888888874 23899998
No 351
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=71.56 E-value=7.7 Score=28.53 Aligned_cols=31 Identities=13% Similarity=-0.003 Sum_probs=25.3
Q ss_pred CCCEEEEEcC--cccHHHHHHHhhCCCCCEEEEEe
Q 042171 4 KLKKTIEIGV--FTGYSLFLTALTIPEDGQITAID 36 (125)
Q Consensus 4 ~~~~vLeiG~--g~G~~t~~la~~~~~~~~v~~iD 36 (125)
+.++||-+|+ |.|..++.++++. +.+|++++
T Consensus 149 ~g~~vlI~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~ 181 (336)
T 4b7c_A 149 NGETVVISGAAGAVGSVAGQIARLK--GCRVVGIA 181 (336)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEe
Confidence 3568999997 6788888888876 46999998
No 352
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=70.37 E-value=13 Score=27.38 Aligned_cols=66 Identities=23% Similarity=0.121 Sum_probs=38.7
Q ss_pred CCCEEEEEcCc-ccHHHHHHHhhCCCCCEEEEEe-----------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEE
Q 042171 4 KLKKTIEIGVF-TGYSLFLTALTIPEDGQITAID-----------ARVDHKINFIESEALSVLDQLLKDSENEVNFDYAF 71 (125)
Q Consensus 4 ~~~~vLeiG~g-~G~~t~~la~~~~~~~~v~~iD-----------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~ 71 (125)
...+||-+|+| .|..++.+|++.+ ...++++| .|...-+.....+..+....+.. ...+|.|+
T Consensus 160 ~g~~VlV~GaG~vG~~aiq~ak~~G-~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~~~----~~g~d~v~ 234 (346)
T 4a2c_A 160 ENKNVIIIGAGTIGLLAIQCAVALG-AKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRE----LRFNQLIL 234 (346)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHGG----GCSSEEEE
T ss_pred CCCEEEEECCCCcchHHHHHHHHcC-CcEEEEEechHHHHHHHHHcCCeEEEeCCCCCHHHHHHhhcc----cCCccccc
Confidence 45688989875 4667778888876 45678888 33332333333444444433321 34577776
Q ss_pred EcC
Q 042171 72 MDA 74 (125)
Q Consensus 72 id~ 74 (125)
-..
T Consensus 235 d~~ 237 (346)
T 4a2c_A 235 ETA 237 (346)
T ss_dssp ECS
T ss_pred ccc
Confidence 433
No 353
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=70.30 E-value=15 Score=27.39 Aligned_cols=66 Identities=17% Similarity=0.025 Sum_probs=44.6
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCC-CCCEEEEEe---CCC----CCcEEEEecchHHH--HHHHhhcCCCCCceeEEEEc
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIP-EDGQITAID---ARV----DHKINFIESEALSV--LDQLLKDSENEVNFDYAFMD 73 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~-~~~~v~~iD---~~~----~~~i~~~~gd~~~~--l~~~~~~~~~~~~fD~v~id 73 (125)
+.++||-.|+ +|+.+..+++.+- .+.+|++++ ... ..+++++.+|..+. +..+. ..+|.|+.-
T Consensus 28 ~~~~vlVtGa-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~------~~~d~Vih~ 100 (379)
T 2c5a_A 28 ENLKISITGA-GGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVT------EGVDHVFNL 100 (379)
T ss_dssp SCCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHH------TTCSEEEEC
T ss_pred cCCeEEEECC-ccHHHHHHHHHHHHCCCeEEEEECCCccchhhccCCceEEECCCCCHHHHHHHh------CCCCEEEEC
Confidence 3468998885 6888888887663 356899998 111 13688999998653 23321 468999987
Q ss_pred CCC
Q 042171 74 ADK 76 (125)
Q Consensus 74 ~~~ 76 (125)
++.
T Consensus 101 A~~ 103 (379)
T 2c5a_A 101 AAD 103 (379)
T ss_dssp CCC
T ss_pred cee
Confidence 664
No 354
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=70.00 E-value=13 Score=27.47 Aligned_cols=31 Identities=13% Similarity=0.128 Sum_probs=25.5
Q ss_pred CCCEEEEEcC--cccHHHHHHHhhCCCCCEEEEEe
Q 042171 4 KLKKTIEIGV--FTGYSLFLTALTIPEDGQITAID 36 (125)
Q Consensus 4 ~~~~vLeiG~--g~G~~t~~la~~~~~~~~v~~iD 36 (125)
..++||-+|+ |.|..++.++++.+ .+|++++
T Consensus 159 ~g~~VlV~Gasg~iG~~~~~~a~~~G--a~Vi~~~ 191 (342)
T 4eye_A 159 AGETVLVLGAAGGIGTAAIQIAKGMG--AKVIAVV 191 (342)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcC--CEEEEEe
Confidence 3568999996 67888999999874 6999998
No 355
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=69.93 E-value=7.4 Score=28.36 Aligned_cols=66 Identities=6% Similarity=-0.069 Sum_probs=44.0
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCC-CCCEEEEEe-CCCCCcEEEEecchHHH--HHHHhhcCCCCCceeEEEEcCCC
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIP-EDGQITAID-ARVDHKINFIESEALSV--LDQLLKDSENEVNFDYAFMDADK 76 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~-~~~~v~~iD-~~~~~~i~~~~gd~~~~--l~~~~~~~~~~~~fD~v~id~~~ 76 (125)
+.++||-.| |+|+.+..+++.+- .+.+|++++ ..-..+++++.+|..+. +..+ -..+|.|+.-++.
T Consensus 18 ~~~~vlVtG-atG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~Dl~d~~~~~~~------~~~~d~vih~A~~ 87 (347)
T 4id9_A 18 GSHMILVTG-SAGRVGRAVVAALRTQGRTVRGFDLRPSGTGGEEVVGSLEDGQALSDA------IMGVSAVLHLGAF 87 (347)
T ss_dssp ---CEEEET-TTSHHHHHHHHHHHHTTCCEEEEESSCCSSCCSEEESCTTCHHHHHHH------HTTCSEEEECCCC
T ss_pred CCCEEEEEC-CCChHHHHHHHHHHhCCCEEEEEeCCCCCCCccEEecCcCCHHHHHHH------HhCCCEEEECCcc
Confidence 456788888 57888888888763 356899999 22225788899988753 2222 1468999976654
No 356
>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}
Probab=69.72 E-value=16 Score=25.28 Aligned_cols=74 Identities=20% Similarity=0.137 Sum_probs=43.0
Q ss_pred CCCCCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------CCCCCcEEEEecchHHHHHH--HhhcCCCCCceeE
Q 042171 1 MRLKLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------ARVDHKINFIESEALSVLDQ--LLKDSENEVNFDY 69 (125)
Q Consensus 1 ~~~~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------~~~~~~i~~~~gd~~~~l~~--~~~~~~~~~~fD~ 69 (125)
|+.+.+.+|-.|++.| .+..+++.+-.+++|+.++ .. ..++.++..|..+.... +.......+.+|.
T Consensus 1 m~l~~k~vlITGas~g-IG~~~a~~l~~g~~v~~~~r~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~ 78 (245)
T 3e9n_A 1 MSLKKKIAVVTGATGG-MGIEIVKDLSRDHIVYALGRNPEHLAALAE-IEGVEPIESDIVKEVLEEGGVDKLKNLDHVDT 78 (245)
T ss_dssp -----CEEEEESTTSH-HHHHHHHHHTTTSEEEEEESCHHHHHHHHT-STTEEEEECCHHHHHHTSSSCGGGTTCSCCSE
T ss_pred CCCCCCEEEEEcCCCH-HHHHHHHHHhCCCeEEEEeCCHHHHHHHHh-hcCCcceecccchHHHHHHHHHHHHhcCCCCE
Confidence 5677788999887654 5566666665578899998 22 24688899988765211 0000011247999
Q ss_pred EEEcCCC
Q 042171 70 AFMDADK 76 (125)
Q Consensus 70 v~id~~~ 76 (125)
++..+..
T Consensus 79 lv~~Ag~ 85 (245)
T 3e9n_A 79 LVHAAAV 85 (245)
T ss_dssp EEECC--
T ss_pred EEECCCc
Confidence 9987764
No 357
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=69.72 E-value=4.1 Score=28.98 Aligned_cols=63 Identities=11% Similarity=0.137 Sum_probs=44.4
Q ss_pred CCEEEEEcCcccHHHHHHHhhCC-CCCEEEEEe---CCCCCcEEEEecchHHH--HHHHhhcCCCCCceeEEEEcC
Q 042171 5 LKKTIEIGVFTGYSLFLTALTIP-EDGQITAID---ARVDHKINFIESEALSV--LDQLLKDSENEVNFDYAFMDA 74 (125)
Q Consensus 5 ~~~vLeiG~g~G~~t~~la~~~~-~~~~v~~iD---~~~~~~i~~~~gd~~~~--l~~~~~~~~~~~~fD~v~id~ 74 (125)
.++||-.| . |+.+..+++.+- .+.+|++++ ..+..+++++.+|..+. +..+. .+.+|.|+.-+
T Consensus 3 ~~~ilVtG-a-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~Dl~d~~~~~~~~-----~~~~d~vih~a 71 (286)
T 3gpi_A 3 LSKILIAG-C-GDLGLELARRLTAQGHEVTGLRRSAQPMPAGVQTLIADVTRPDTLASIV-----HLRPEILVYCV 71 (286)
T ss_dssp CCCEEEEC-C-SHHHHHHHHHHHHTTCCEEEEECTTSCCCTTCCEEECCTTCGGGCTTGG-----GGCCSEEEECH
T ss_pred CCcEEEEC-C-CHHHHHHHHHHHHCCCEEEEEeCCccccccCCceEEccCCChHHHHHhh-----cCCCCEEEEeC
Confidence 35799999 3 999999988773 356899999 44567899999998753 12221 23599998543
No 358
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=68.58 E-value=16 Score=26.70 Aligned_cols=31 Identities=6% Similarity=-0.101 Sum_probs=24.6
Q ss_pred CCCEEEEEcC--cccHHHHHHHhhCCCCCEEEEEe
Q 042171 4 KLKKTIEIGV--FTGYSLFLTALTIPEDGQITAID 36 (125)
Q Consensus 4 ~~~~vLeiG~--g~G~~t~~la~~~~~~~~v~~iD 36 (125)
..++||-.|+ |.|..++.++++. +.+|++++
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~~~~~--G~~V~~~~ 177 (333)
T 1v3u_A 145 GGETVLVSAAAGAVGSVVGQIAKLK--GCKVVGAA 177 (333)
T ss_dssp SSCEEEEESTTBHHHHHHHHHHHHT--TCEEEEEE
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHC--CCEEEEEe
Confidence 3468999997 7778888888876 46899998
No 359
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=68.44 E-value=8.4 Score=28.47 Aligned_cols=31 Identities=16% Similarity=0.023 Sum_probs=25.0
Q ss_pred CCCEEEEEcCc-ccHHHHHHHhhCCCCCEEEEEe
Q 042171 4 KLKKTIEIGVF-TGYSLFLTALTIPEDGQITAID 36 (125)
Q Consensus 4 ~~~~vLeiG~g-~G~~t~~la~~~~~~~~v~~iD 36 (125)
...+||-+|+| .|..++.+|+..+ .+|++++
T Consensus 164 ~g~~VlV~GaG~vG~~~~~~a~~~G--a~Vi~~~ 195 (339)
T 1rjw_A 164 PGEWVAIYGIGGLGHVAVQYAKAMG--LNVVAVD 195 (339)
T ss_dssp TTCEEEEECCSTTHHHHHHHHHHTT--CEEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEe
Confidence 34689999975 5888888998874 6999998
No 360
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=68.24 E-value=8.1 Score=27.48 Aligned_cols=75 Identities=13% Similarity=0.014 Sum_probs=43.6
Q ss_pred CCCCCCEEEEEcCcccHHHHHHHhhC-CCCCEEEEEe----------CCCCCcEEEEecchHHH--HHHHhhcC-CCCCc
Q 042171 1 MRLKLKKTIEIGVFTGYSLFLTALTI-PEDGQITAID----------ARVDHKINFIESEALSV--LDQLLKDS-ENEVN 66 (125)
Q Consensus 1 ~~~~~~~vLeiG~g~G~~t~~la~~~-~~~~~v~~iD----------~~~~~~i~~~~gd~~~~--l~~~~~~~-~~~~~ 66 (125)
|+...++||-.|++ |..+..+++.+ ..+.+|+.++ .....+++++..|..+. +..+.... ...+.
T Consensus 1 M~~~~k~vlVTGas-~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~ 79 (281)
T 3m1a_A 1 MSESAKVWLVTGAS-SGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGR 79 (281)
T ss_dssp ---CCCEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCCcEEEEECCC-ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCC
Confidence 56667788887765 55555666654 3367899998 11345788998887642 11111000 00247
Q ss_pred eeEEEEcCCC
Q 042171 67 FDYAFMDADK 76 (125)
Q Consensus 67 fD~v~id~~~ 76 (125)
+|.++..+..
T Consensus 80 id~lv~~Ag~ 89 (281)
T 3m1a_A 80 VDVLVNNAGR 89 (281)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCc
Confidence 9999987764
No 361
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=68.13 E-value=14 Score=25.83 Aligned_cols=71 Identities=15% Similarity=0.124 Sum_probs=41.4
Q ss_pred CCCCCEEEEEcCcccHHHHHHHhhC-CCCCEEEEEe----------CCCCCcEEEEecchHHH------HHHHhhcCCCC
Q 042171 2 RLKLKKTIEIGVFTGYSLFLTALTI-PEDGQITAID----------ARVDHKINFIESEALSV------LDQLLKDSENE 64 (125)
Q Consensus 2 ~~~~~~vLeiG~g~G~~t~~la~~~-~~~~~v~~iD----------~~~~~~i~~~~gd~~~~------l~~~~~~~~~~ 64 (125)
..+.+.+|-.|.+.| .+..+++.+ ..+.+|+.++ ..+..++.++..|..+. +...... .
T Consensus 4 ~l~~k~~lVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~---~ 79 (257)
T 3tpc_A 4 QLKSRVFIVTGASSG-LGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQE---F 79 (257)
T ss_dssp CCTTCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHH---H
T ss_pred ccCCCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHH---c
Confidence 456778898887655 444555544 3367899888 11234677888877542 1111111 2
Q ss_pred CceeEEEEcCCC
Q 042171 65 VNFDYAFMDADK 76 (125)
Q Consensus 65 ~~fD~v~id~~~ 76 (125)
+..|.++..+..
T Consensus 80 g~id~lv~nAg~ 91 (257)
T 3tpc_A 80 GHVHGLVNCAGT 91 (257)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 579999988764
No 362
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=68.10 E-value=6.7 Score=28.96 Aligned_cols=66 Identities=20% Similarity=0.290 Sum_probs=45.3
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCC--CCEEEEEe---CCC-----CCcEEEEecchH-H--HHHHHhhcCCCCCceeEE
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPE--DGQITAID---ARV-----DHKINFIESEAL-S--VLDQLLKDSENEVNFDYA 70 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~--~~~v~~iD---~~~-----~~~i~~~~gd~~-~--~l~~~~~~~~~~~~fD~v 70 (125)
..++||-.| |+|+.+..+++.+-+ +.+|++++ ... ..+++++.+|.. + .+.... ..+|.|
T Consensus 23 ~~~~vlVtG-atG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~------~~~d~V 95 (372)
T 3slg_A 23 KAKKVLILG-VNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHV------KKCDVI 95 (372)
T ss_dssp CCCEEEEES-CSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHH------HHCSEE
T ss_pred CCCEEEEEC-CCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHh------ccCCEE
Confidence 346888877 578888888887732 45899999 111 257999999987 3 233321 368999
Q ss_pred EEcCCC
Q 042171 71 FMDADK 76 (125)
Q Consensus 71 ~id~~~ 76 (125)
+--++.
T Consensus 96 ih~A~~ 101 (372)
T 3slg_A 96 LPLVAI 101 (372)
T ss_dssp EECBCC
T ss_pred EEcCcc
Confidence 975553
No 363
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=68.01 E-value=4.9 Score=25.57 Aligned_cols=64 Identities=11% Similarity=0.115 Sum_probs=41.2
Q ss_pred CCEEEEEcCcccHHHHHHHhhCC-CCCEEEEEeCC------C-CCcEEEEecchHHH--HHHHhhcCCCCCceeEEEEcC
Q 042171 5 LKKTIEIGVFTGYSLFLTALTIP-EDGQITAIDAR------V-DHKINFIESEALSV--LDQLLKDSENEVNFDYAFMDA 74 (125)
Q Consensus 5 ~~~vLeiG~g~G~~t~~la~~~~-~~~~v~~iD~~------~-~~~i~~~~gd~~~~--l~~~~~~~~~~~~fD~v~id~ 74 (125)
.++|+-+|+ |..+..+++.+. .+.+|+.+|.. + ...+.++.+|..+. +... ....+|+|++-.
T Consensus 6 ~~~v~I~G~--G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~-----~~~~~d~vi~~~ 78 (141)
T 3llv_A 6 RYEYIVIGS--EAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSL-----DLEGVSAVLITG 78 (141)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHS-----CCTTCSEEEECC
T ss_pred CCEEEEECC--CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhC-----CcccCCEEEEec
Confidence 357899988 667777777664 25689999911 1 12467788888653 2222 135689998754
Q ss_pred C
Q 042171 75 D 75 (125)
Q Consensus 75 ~ 75 (125)
.
T Consensus 79 ~ 79 (141)
T 3llv_A 79 S 79 (141)
T ss_dssp S
T ss_pred C
Confidence 4
No 364
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=66.96 E-value=26 Score=23.59 Aligned_cols=65 Identities=17% Similarity=0.073 Sum_probs=44.8
Q ss_pred EEEEEcCcccHHHHHHHhhCC-CCCEEEEEe---CCC--CCcEEEEecchHH-HHHHHhhcCCCCCceeEEEEcCCC
Q 042171 7 KTIEIGVFTGYSLFLTALTIP-EDGQITAID---ARV--DHKINFIESEALS-VLDQLLKDSENEVNFDYAFMDADK 76 (125)
Q Consensus 7 ~vLeiG~g~G~~t~~la~~~~-~~~~v~~iD---~~~--~~~i~~~~gd~~~-~l~~~~~~~~~~~~fD~v~id~~~ 76 (125)
+||-.| ++|..+..+++.+- .+.+|++++ ... ..+++++.+|..+ . ..+..- -..+|.|+.-+..
T Consensus 2 ~ilItG-atG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~D~~d~~-~~~~~~---~~~~d~vi~~ag~ 73 (219)
T 3dqp_A 2 KIFIVG-STGRVGKSLLKSLSTTDYQIYAGARKVEQVPQYNNVKAVHFDVDWTP-EEMAKQ---LHGMDAIINVSGS 73 (219)
T ss_dssp EEEEES-TTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCCTTEEEEECCTTSCH-HHHHTT---TTTCSEEEECCCC
T ss_pred eEEEEC-CCCHHHHHHHHHHHHCCCEEEEEECCccchhhcCCceEEEecccCCH-HHHHHH---HcCCCEEEECCcC
Confidence 578777 46888888888764 356899999 111 1689999999877 3 222211 3569999987664
No 365
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=66.66 E-value=7.1 Score=28.94 Aligned_cols=31 Identities=13% Similarity=-0.051 Sum_probs=23.9
Q ss_pred CCEEEEEcCc-ccHHHHHHHhhCCCCCEEEEEe
Q 042171 5 LKKTIEIGVF-TGYSLFLTALTIPEDGQITAID 36 (125)
Q Consensus 5 ~~~vLeiG~g-~G~~t~~la~~~~~~~~v~~iD 36 (125)
..+||-+|+| .|..++.+|++.+ -.+|++++
T Consensus 168 g~~VlV~GaG~vG~~~~q~a~~~G-a~~Vi~~~ 199 (348)
T 2d8a_A 168 GKSVLITGAGPLGLLGIAVAKASG-AYPVIVSE 199 (348)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTT-CCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEC
Confidence 4689999985 3788888888874 23899998
No 366
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=66.50 E-value=12 Score=27.94 Aligned_cols=31 Identities=13% Similarity=-0.053 Sum_probs=25.6
Q ss_pred CCCEEEEEc--CcccHHHHHHHhhCCCCCEEEEEe
Q 042171 4 KLKKTIEIG--VFTGYSLFLTALTIPEDGQITAID 36 (125)
Q Consensus 4 ~~~~vLeiG--~g~G~~t~~la~~~~~~~~v~~iD 36 (125)
..++||-+| .+.|..++.+|++. +.+|++++
T Consensus 163 ~g~~VlV~Ga~G~iG~~~~q~a~~~--Ga~Vi~~~ 195 (362)
T 2c0c_A 163 EGKKVLVTAAAGGTGQFAMQLSKKA--KCHVIGTC 195 (362)
T ss_dssp TTCEEEETTTTBTTHHHHHHHHHHT--TCEEEEEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhC--CCEEEEEE
Confidence 346899999 67889999999987 46899998
No 367
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=66.18 E-value=6.2 Score=28.38 Aligned_cols=62 Identities=13% Similarity=0.139 Sum_probs=43.7
Q ss_pred EEEEEcCcccHHHHHHHhhCCCCCEEEEEe-------CCCCCcEEEEecchHH-HHHHHhhcCCCCCceeEEEEcCC
Q 042171 7 KTIEIGVFTGYSLFLTALTIPEDGQITAID-------ARVDHKINFIESEALS-VLDQLLKDSENEVNFDYAFMDAD 75 (125)
Q Consensus 7 ~vLeiG~g~G~~t~~la~~~~~~~~v~~iD-------~~~~~~i~~~~gd~~~-~l~~~~~~~~~~~~fD~v~id~~ 75 (125)
+||-.| |+|+.+..+++.+-..|.+++++ ..+..+++++.+|..+ .+..+ -..+|.|+--++
T Consensus 3 ~vlVTG-atG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~------~~~~d~vih~a~ 72 (313)
T 3ehe_A 3 LIVVTG-GAGFIGSHVVDKLSESNEIVVIDNLSSGNEEFVNEAARLVKADLAADDIKDY------LKGAEEVWHIAA 72 (313)
T ss_dssp CEEEET-TTSHHHHHHHHHHTTTSCEEEECCCSSCCGGGSCTTEEEECCCTTTSCCHHH------HTTCSEEEECCC
T ss_pred EEEEEC-CCchHHHHHHHHHHhCCCEEEEEcCCCCChhhcCCCcEEEECcCChHHHHHH------hcCCCEEEECCC
Confidence 578777 67999999999886677888887 1234678999998865 11222 146899887655
No 368
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=66.13 E-value=12 Score=26.19 Aligned_cols=72 Identities=14% Similarity=0.117 Sum_probs=45.1
Q ss_pred CCCCCCEEEEEcCcccHHHHHHHhhC-CCCCEEEEEe----------CCCCCcEEEEecchHHH------HHHHhhcCCC
Q 042171 1 MRLKLKKTIEIGVFTGYSLFLTALTI-PEDGQITAID----------ARVDHKINFIESEALSV------LDQLLKDSEN 63 (125)
Q Consensus 1 ~~~~~~~vLeiG~g~G~~t~~la~~~-~~~~~v~~iD----------~~~~~~i~~~~gd~~~~------l~~~~~~~~~ 63 (125)
|..+.+.+|-.|.+.|. +..+++.+ ..+.+|+.++ ..+..++.++..|..+. +..+...
T Consensus 5 m~l~~k~vlITGas~gI-G~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~--- 80 (261)
T 3n74_A 5 MSLEGKVALITGAGSGF-GEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSK--- 80 (261)
T ss_dssp CTTTTCEEEEETTTSHH-HHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHH---
T ss_pred ccCCCCEEEEECCCchH-HHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHh---
Confidence 55677889999987554 34444443 3367899998 12345788888887542 1211111
Q ss_pred CCceeEEEEcCCC
Q 042171 64 EVNFDYAFMDADK 76 (125)
Q Consensus 64 ~~~fD~v~id~~~ 76 (125)
.+++|.++..+..
T Consensus 81 ~g~id~li~~Ag~ 93 (261)
T 3n74_A 81 FGKVDILVNNAGI 93 (261)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCCCEEEECCcc
Confidence 2479999988764
No 369
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=65.34 E-value=12 Score=27.64 Aligned_cols=32 Identities=9% Similarity=0.035 Sum_probs=25.0
Q ss_pred CCCEEEEEcC--cccHHHHHHHhhCCCCCEEEEEe
Q 042171 4 KLKKTIEIGV--FTGYSLFLTALTIPEDGQITAID 36 (125)
Q Consensus 4 ~~~~vLeiG~--g~G~~t~~la~~~~~~~~v~~iD 36 (125)
...+||-+|+ +.|..++.+|++.+ ..+|++++
T Consensus 142 ~g~~VlV~Ga~G~vG~~a~qla~~~g-~~~V~~~~ 175 (349)
T 4a27_A 142 EGMSVLVHSAGGGVGQAVAQLCSTVP-NVTVFGTA 175 (349)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHTTST-TCEEEEEE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHcC-CcEEEEeC
Confidence 3468999987 56888888888775 57888887
No 370
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=65.06 E-value=18 Score=24.99 Aligned_cols=64 Identities=13% Similarity=0.157 Sum_probs=42.6
Q ss_pred CCEEEEEcCcccHHHHHHHhhCCCCCEEEEEeCC------CCCcEEEEecchHHH--HHHHhhcCCCCCceeEEEEcCC
Q 042171 5 LKKTIEIGVFTGYSLFLTALTIPEDGQITAIDAR------VDHKINFIESEALSV--LDQLLKDSENEVNFDYAFMDAD 75 (125)
Q Consensus 5 ~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD~~------~~~~i~~~~gd~~~~--l~~~~~~~~~~~~fD~v~id~~ 75 (125)
..+|+-+|+ |..+..+++.+...+.|+.+|.. +...+.++.||+.+. +... .-...|.|++-..
T Consensus 9 ~~~viI~G~--G~~G~~la~~L~~~g~v~vid~~~~~~~~~~~~~~~i~gd~~~~~~l~~a-----~i~~ad~vi~~~~ 80 (234)
T 2aef_A 9 SRHVVICGW--SESTLECLRELRGSEVFVLAEDENVRKKVLRSGANFVHGDPTRVSDLEKA-----NVRGARAVIVDLE 80 (234)
T ss_dssp -CEEEEESC--CHHHHHHHHHSTTSEEEEEESCGGGHHHHHHTTCEEEESCTTCHHHHHHT-----TCTTCSEEEECCS
T ss_pred CCEEEEECC--ChHHHHHHHHHHhCCeEEEEECCHHHHHHHhcCCeEEEcCCCCHHHHHhc-----CcchhcEEEEcCC
Confidence 357888887 78999999988654448888811 113578899998743 3221 1356898887543
No 371
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=64.92 E-value=9.1 Score=28.07 Aligned_cols=31 Identities=6% Similarity=-0.183 Sum_probs=24.9
Q ss_pred CCCEEEEEc--CcccHHHHHHHhhCCCCCEEEEEe
Q 042171 4 KLKKTIEIG--VFTGYSLFLTALTIPEDGQITAID 36 (125)
Q Consensus 4 ~~~~vLeiG--~g~G~~t~~la~~~~~~~~v~~iD 36 (125)
+.++||-+| .+.|..++.++++. +.+|++++
T Consensus 140 ~g~~VlV~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~ 172 (325)
T 3jyn_A 140 PGEIILFHAAAGGVGSLACQWAKAL--GAKLIGTV 172 (325)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHH--TCEEEEEE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHC--CCEEEEEe
Confidence 346899988 46788888899886 46999998
No 372
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=64.68 E-value=21 Score=26.46 Aligned_cols=32 Identities=16% Similarity=0.051 Sum_probs=24.4
Q ss_pred CCCEEEEEcCcc-cHHHHHHHhhCCCCCEEEEEe
Q 042171 4 KLKKTIEIGVFT-GYSLFLTALTIPEDGQITAID 36 (125)
Q Consensus 4 ~~~~vLeiG~g~-G~~t~~la~~~~~~~~v~~iD 36 (125)
...+||-+|+|. |..++.+|++.+ -.+|+++|
T Consensus 179 ~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~ 211 (363)
T 3m6i_A 179 LGDPVLICGAGPIGLITMLCAKAAG-ACPLVITD 211 (363)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTT-CCSEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEC
Confidence 346888899865 888889999874 23488888
No 373
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=64.17 E-value=30 Score=24.39 Aligned_cols=73 Identities=12% Similarity=0.051 Sum_probs=43.3
Q ss_pred CCCCEEEEEcCcccHHHHHHHhhC-CCCCEEEEEe---C-CCCCcEEEEecchHHH--HHHHhhcC-CCCCceeEEEEcC
Q 042171 3 LKLKKTIEIGVFTGYSLFLTALTI-PEDGQITAID---A-RVDHKINFIESEALSV--LDQLLKDS-ENEVNFDYAFMDA 74 (125)
Q Consensus 3 ~~~~~vLeiG~g~G~~t~~la~~~-~~~~~v~~iD---~-~~~~~i~~~~gd~~~~--l~~~~~~~-~~~~~fD~v~id~ 74 (125)
.+.+.+|-.|.+. ..+..+++.+ ..+.+|+.++ . ....++.++.+|..+. +..+...- ...+.+|.++..+
T Consensus 26 ~~~k~vlVTGas~-gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nA 104 (260)
T 3un1_A 26 NQQKVVVITGASQ-GIGAGLVRAYRDRNYRVVATSRSIKPSADPDIHTVAGDISKPETADRIVREGIERFGRIDSLVNNA 104 (260)
T ss_dssp TTCCEEEESSCSS-HHHHHHHHHHHHTTCEEEEEESSCCCCSSTTEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred cCCCEEEEeCCCC-HHHHHHHHHHHHCCCEEEEEeCChhhcccCceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEEECC
Confidence 4567788888654 4455555554 3367899999 1 1224688888887642 11111100 0024799999887
Q ss_pred CC
Q 042171 75 DK 76 (125)
Q Consensus 75 ~~ 76 (125)
..
T Consensus 105 g~ 106 (260)
T 3un1_A 105 GV 106 (260)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 374
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=63.91 E-value=5 Score=27.00 Aligned_cols=69 Identities=16% Similarity=0.039 Sum_probs=43.8
Q ss_pred CCCCCCEEEEEcCcccHHHHHHHhhCCC-CC--EEEEEe---CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEEEcC
Q 042171 1 MRLKLKKTIEIGVFTGYSLFLTALTIPE-DG--QITAID---ARVDHKINFIESEALSVLDQLLKDSENEVNFDYAFMDA 74 (125)
Q Consensus 1 ~~~~~~~vLeiG~g~G~~t~~la~~~~~-~~--~v~~iD---~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~id~ 74 (125)
|+...++||-.| ++|..+..+++.+-+ +. +|++++ .....+++++.+|..+. ..+.. .- +|.|+.-+
T Consensus 1 M~~~~~~vlVtG-atG~iG~~l~~~l~~~g~~~~V~~~~r~~~~~~~~~~~~~~D~~~~-~~~~~----~~-~d~vi~~a 73 (215)
T 2a35_A 1 MHSTPKRVLLAG-ATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPRLDNPVGPLAEL-LPQLD----GS-IDTAFCCL 73 (215)
T ss_dssp ---CCCEEEEEC-TTSHHHHHHHHHHHHCTTCCEEECCBSSCCCCCTTEECCBSCHHHH-GGGCC----SC-CSEEEECC
T ss_pred CCCCCceEEEEC-CCcHHHHHHHHHHHhCCCCCeEEEEeCCCcccCCCceEEeccccCH-HHHHH----hh-hcEEEECe
Confidence 444456899888 467777777776632 33 899988 22235788899998765 22311 12 89998766
Q ss_pred CC
Q 042171 75 DK 76 (125)
Q Consensus 75 ~~ 76 (125)
..
T Consensus 74 ~~ 75 (215)
T 2a35_A 74 GT 75 (215)
T ss_dssp CC
T ss_pred ee
Confidence 54
No 375
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=63.59 E-value=21 Score=26.08 Aligned_cols=31 Identities=6% Similarity=-0.156 Sum_probs=25.2
Q ss_pred CCCEEEEEc--CcccHHHHHHHhhCCCCCEEEEEe
Q 042171 4 KLKKTIEIG--VFTGYSLFLTALTIPEDGQITAID 36 (125)
Q Consensus 4 ~~~~vLeiG--~g~G~~t~~la~~~~~~~~v~~iD 36 (125)
..++||-+| .|.|..++.+++.. +.+|++++
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~a~~~--G~~Vi~~~ 177 (333)
T 1wly_A 145 PGDYVLIHAAAGGMGHIMVPWARHL--GATVIGTV 177 (333)
T ss_dssp TTCEEEETTTTSTTHHHHHHHHHHT--TCEEEEEE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHC--CCEEEEEe
Confidence 346899999 47888888888886 47999998
No 376
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=63.52 E-value=13 Score=27.48 Aligned_cols=32 Identities=19% Similarity=0.221 Sum_probs=24.6
Q ss_pred CCCEEEEEcCc--ccHHHHHHHhhCCCCCEEEEEe
Q 042171 4 KLKKTIEIGVF--TGYSLFLTALTIPEDGQITAID 36 (125)
Q Consensus 4 ~~~~vLeiG~g--~G~~t~~la~~~~~~~~v~~iD 36 (125)
..++||-+|+| .|..++.++++.. +.+|+++|
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a~~~~-Ga~Vi~~~ 203 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIAKAVS-GATIIGVD 203 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHT-CCEEEEEE
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcC-CCeEEEEc
Confidence 34689999987 6777788888762 46899998
No 377
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=63.39 E-value=26 Score=24.66 Aligned_cols=71 Identities=13% Similarity=0.082 Sum_probs=43.9
Q ss_pred CCCCCEEEEEcCcccHHHHHHHhhC-CCCCEEEEEe---------------CCCCCcEEEEecchHHH--HHHHhhcCCC
Q 042171 2 RLKLKKTIEIGVFTGYSLFLTALTI-PEDGQITAID---------------ARVDHKINFIESEALSV--LDQLLKDSEN 63 (125)
Q Consensus 2 ~~~~~~vLeiG~g~G~~t~~la~~~-~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~--l~~~~~~~~~ 63 (125)
..+.+.+|-.|++.| .+..+++.+ ..+.+|+.++ .....++..+..|..+. +..+...
T Consensus 7 ~l~~k~~lVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~--- 82 (267)
T 3t4x_A 7 QLKGKTALVTGSTAG-IGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEK--- 82 (267)
T ss_dssp CCTTCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHH---
T ss_pred ccCCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHh---
Confidence 446678888886544 455555554 3367899988 11134677888877542 2222221
Q ss_pred CCceeEEEEcCCC
Q 042171 64 EVNFDYAFMDADK 76 (125)
Q Consensus 64 ~~~fD~v~id~~~ 76 (125)
-+..|.++..+..
T Consensus 83 ~g~id~lv~nAg~ 95 (267)
T 3t4x_A 83 YPKVDILINNLGI 95 (267)
T ss_dssp CCCCSEEEECCCC
T ss_pred cCCCCEEEECCCC
Confidence 3579999988764
No 378
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=61.93 E-value=19 Score=25.78 Aligned_cols=72 Identities=14% Similarity=0.070 Sum_probs=46.1
Q ss_pred CCCCCCEEEEEcCcccHHHHHHHhhC-CCCCEEEEEe----------CCCCCcEEEEecchHHH------HHHHhhcCCC
Q 042171 1 MRLKLKKTIEIGVFTGYSLFLTALTI-PEDGQITAID----------ARVDHKINFIESEALSV------LDQLLKDSEN 63 (125)
Q Consensus 1 ~~~~~~~vLeiG~g~G~~t~~la~~~-~~~~~v~~iD----------~~~~~~i~~~~gd~~~~------l~~~~~~~~~ 63 (125)
|..+.+.+|-.|.+.| .+..+++.+ ..+.+|+.++ .....++.++..|..+. +......
T Consensus 1 M~l~gk~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~--- 76 (281)
T 3zv4_A 1 MKLTGEVALITGGASG-LGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAA--- 76 (281)
T ss_dssp CTTTTCEEEEETCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHH---
T ss_pred CCcCCCEEEEECCCcH-HHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHh---
Confidence 6677889999997655 444555544 3367899998 12345788888887642 1222111
Q ss_pred CCceeEEEEcCCC
Q 042171 64 EVNFDYAFMDADK 76 (125)
Q Consensus 64 ~~~fD~v~id~~~ 76 (125)
.+++|.++..+..
T Consensus 77 ~g~iD~lvnnAg~ 89 (281)
T 3zv4_A 77 FGKIDTLIPNAGI 89 (281)
T ss_dssp HSCCCEEECCCCC
T ss_pred cCCCCEEEECCCc
Confidence 2579999987764
No 379
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}
Probab=61.64 E-value=17 Score=26.33 Aligned_cols=67 Identities=19% Similarity=0.180 Sum_probs=44.1
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCC--------EEEEEeC---C----CCCcEEEEecchHHH--HHHHhhcCCCCCc
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDG--------QITAIDA---R----VDHKINFIESEALSV--LDQLLKDSENEVN 66 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~--------~v~~iD~---~----~~~~i~~~~gd~~~~--l~~~~~~~~~~~~ 66 (125)
+..+||-.|. +|..+..+++.+-..| +|++++. . ...+++++.+|..+. +..+. ...
T Consensus 13 ~~~~vlVtGa-~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-----~~~ 86 (342)
T 2hrz_A 13 QGMHIAIIGA-AGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGFSGAVDARAADLSAPGEAEKLV-----EAR 86 (342)
T ss_dssp SCEEEEEETT-TSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCTTCCSEEEEEECCTTSTTHHHHHH-----HTC
T ss_pred cCCEEEEECC-CcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCccccccCCceeEEEcCCCCHHHHHHHH-----hcC
Confidence 4457887774 6888888887664334 7999981 1 234788999988752 23221 146
Q ss_pred eeEEEEcCCC
Q 042171 67 FDYAFMDADK 76 (125)
Q Consensus 67 fD~v~id~~~ 76 (125)
+|.|+.-++.
T Consensus 87 ~d~vih~A~~ 96 (342)
T 2hrz_A 87 PDVIFHLAAI 96 (342)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCcc
Confidence 9999987764
No 380
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=61.07 E-value=32 Score=24.62 Aligned_cols=71 Identities=14% Similarity=0.102 Sum_probs=43.1
Q ss_pred CCCCCEEEEEcCcccHHHHHHHhhC-CCCCEEEEEe-------------CCCCCcEEEEecchHHH------HHHHhhcC
Q 042171 2 RLKLKKTIEIGVFTGYSLFLTALTI-PEDGQITAID-------------ARVDHKINFIESEALSV------LDQLLKDS 61 (125)
Q Consensus 2 ~~~~~~vLeiG~g~G~~t~~la~~~-~~~~~v~~iD-------------~~~~~~i~~~~gd~~~~------l~~~~~~~ 61 (125)
..+.+.+|-.|++.| .+..+++.+ ..+.+|+.++ .....++.++..|..+. +......
T Consensus 25 ~~~~k~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~- 102 (283)
T 3v8b_A 25 NQPSPVALITGAGSG-IGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLK- 102 (283)
T ss_dssp --CCCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred CCCCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-
Confidence 345677888887655 445555544 3367899988 22345788888887642 1222111
Q ss_pred CCCCceeEEEEcCCC
Q 042171 62 ENEVNFDYAFMDADK 76 (125)
Q Consensus 62 ~~~~~fD~v~id~~~ 76 (125)
.+.+|.++..+..
T Consensus 103 --~g~iD~lVnnAg~ 115 (283)
T 3v8b_A 103 --FGHLDIVVANAGI 115 (283)
T ss_dssp --HSCCCEEEECCCC
T ss_pred --hCCCCEEEECCCC
Confidence 2579999988764
No 381
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=60.99 E-value=11 Score=27.79 Aligned_cols=31 Identities=16% Similarity=0.075 Sum_probs=25.8
Q ss_pred CCCEEEEEcCcc-cHHHHHHHhhCCCCCEEEEEe
Q 042171 4 KLKKTIEIGVFT-GYSLFLTALTIPEDGQITAID 36 (125)
Q Consensus 4 ~~~~vLeiG~g~-G~~t~~la~~~~~~~~v~~iD 36 (125)
...+||-+|+|. |..++.+|++.+ .+|++++
T Consensus 176 ~g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~ 207 (348)
T 3two_A 176 KGTKVGVAGFGGLGSMAVKYAVAMG--AEVSVFA 207 (348)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHTT--CEEEEEC
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCC--CeEEEEe
Confidence 456899999876 888899999874 6999998
No 382
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=60.68 E-value=23 Score=26.26 Aligned_cols=30 Identities=13% Similarity=0.005 Sum_probs=24.4
Q ss_pred CCEEEEEcC--cccHHHHHHHhhCCCCCEEEEEe
Q 042171 5 LKKTIEIGV--FTGYSLFLTALTIPEDGQITAID 36 (125)
Q Consensus 5 ~~~vLeiG~--g~G~~t~~la~~~~~~~~v~~iD 36 (125)
.++||-+|+ |.|..++.+++.. +.+|++++
T Consensus 171 g~~vlV~GasggiG~~~~~~a~~~--Ga~Vi~~~ 202 (351)
T 1yb5_A 171 GESVLVHGASGGVGLAACQIARAY--GLKILGTA 202 (351)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEE
T ss_pred cCEEEEECCCChHHHHHHHHHHHC--CCEEEEEe
Confidence 468999996 6788888888876 47899998
No 383
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=60.40 E-value=17 Score=26.91 Aligned_cols=63 Identities=14% Similarity=0.025 Sum_probs=42.3
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCE---EEEEe----------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEE
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQ---ITAID----------ARVDHKINFIESEALSVLDQLLKDSENEVNFDYA 70 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~---v~~iD----------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v 70 (125)
+.-+++|+-||.|-.++-+.++ +.+ |.++| ... ....++.+|..+..+.-... ...+|++
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~a---G~~~~~v~a~E~d~~a~~ty~~N~-~~~~~~~~DI~~i~~~~i~~---~~~~Dll 87 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDL---GIQVDRYIASEVCEDSITVGMVRH-QGKIMYVGDVRSVTQKHIQE---WGPFDLV 87 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHT---TBCEEEEEEECCCHHHHHHHHHHT-TTCEEEECCGGGCCHHHHHH---TCCCSEE
T ss_pred CCCEEEEeCcCccHHHHHHHHC---CCccceEEEEECCHHHHHHHHHhC-CCCceeCCChHHccHHHhcc---cCCcCEE
Confidence 3458999999999999988875 333 58999 223 23457788988754331110 2469999
Q ss_pred EEc
Q 042171 71 FMD 73 (125)
Q Consensus 71 ~id 73 (125)
+.+
T Consensus 88 ~gg 90 (295)
T 2qrv_A 88 IGG 90 (295)
T ss_dssp EEC
T ss_pred Eec
Confidence 864
No 384
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=59.95 E-value=33 Score=23.91 Aligned_cols=70 Identities=19% Similarity=0.108 Sum_probs=41.7
Q ss_pred CCCCEEEEEcC-cccHHHHHHHhhC-CCCCEEEEEe--------------CCCCCcEEEEecchHHH------HHHHhhc
Q 042171 3 LKLKKTIEIGV-FTGYSLFLTALTI-PEDGQITAID--------------ARVDHKINFIESEALSV------LDQLLKD 60 (125)
Q Consensus 3 ~~~~~vLeiG~-g~G~~t~~la~~~-~~~~~v~~iD--------------~~~~~~i~~~~gd~~~~------l~~~~~~ 60 (125)
.+.+.+|-.|. |.|.- ..+++.+ ..+.+|+.++ .....++.++..|..+. +......
T Consensus 20 l~~k~vlITGasg~GIG-~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 98 (266)
T 3o38_A 20 LKGKVVLVTAAAGTGIG-STTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEK 98 (266)
T ss_dssp TTTCEEEESSCSSSSHH-HHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCchH-HHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence 45678898886 44432 2333332 2367899988 11125788998887642 1222111
Q ss_pred CCCCCceeEEEEcCCC
Q 042171 61 SENEVNFDYAFMDADK 76 (125)
Q Consensus 61 ~~~~~~fD~v~id~~~ 76 (125)
.+++|.++..+..
T Consensus 99 ---~g~id~li~~Ag~ 111 (266)
T 3o38_A 99 ---AGRLDVLVNNAGL 111 (266)
T ss_dssp ---HSCCCEEEECCCC
T ss_pred ---hCCCcEEEECCCc
Confidence 2579999988774
No 385
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=59.78 E-value=18 Score=26.43 Aligned_cols=66 Identities=18% Similarity=0.231 Sum_probs=45.1
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCC-CCCEEEEEeC-C------C-----------CCcEEEEecchHHH--HHHHhhcCC
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIP-EDGQITAIDA-R------V-----------DHKINFIESEALSV--LDQLLKDSE 62 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~-~~~~v~~iD~-~------~-----------~~~i~~~~gd~~~~--l~~~~~~~~ 62 (125)
+.++||-.|+ +|..+..+++.+- .+.+|++++. . + ..+++++.+|..+. +..+.
T Consensus 26 ~~~~vlVtGa-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~---- 100 (352)
T 1sb8_A 26 QPKVWLITGV-AGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNAC---- 100 (352)
T ss_dssp SCCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHH----
T ss_pred cCCeEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHh----
Confidence 4568898884 6888888887663 3568999982 1 1 15789999998653 23331
Q ss_pred CCCceeEEEEcCCC
Q 042171 63 NEVNFDYAFMDADK 76 (125)
Q Consensus 63 ~~~~fD~v~id~~~ 76 (125)
..+|.|+.-++.
T Consensus 101 --~~~d~vih~A~~ 112 (352)
T 1sb8_A 101 --AGVDYVLHQAAL 112 (352)
T ss_dssp --TTCSEEEECCSC
T ss_pred --cCCCEEEECCcc
Confidence 468999987764
No 386
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=59.76 E-value=14 Score=27.81 Aligned_cols=31 Identities=19% Similarity=0.105 Sum_probs=25.3
Q ss_pred CCCEEEEEcCcc-cHHHHHHHhhCCCCCEEEEEe
Q 042171 4 KLKKTIEIGVFT-GYSLFLTALTIPEDGQITAID 36 (125)
Q Consensus 4 ~~~~vLeiG~g~-G~~t~~la~~~~~~~~v~~iD 36 (125)
...+||-+|+|. |..++.+|++. +.+|++++
T Consensus 194 ~g~~VlV~GaG~vG~~aiqlak~~--Ga~Vi~~~ 225 (369)
T 1uuf_A 194 PGKKVGVVGIGGLGHMGIKLAHAM--GAHVVAFT 225 (369)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT--TCEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEe
Confidence 346899999875 88888999887 46899998
No 387
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=59.57 E-value=19 Score=26.72 Aligned_cols=31 Identities=13% Similarity=0.064 Sum_probs=24.5
Q ss_pred CCCEEEEEc--CcccHHHHHHHhhCCCCCEEEEEe
Q 042171 4 KLKKTIEIG--VFTGYSLFLTALTIPEDGQITAID 36 (125)
Q Consensus 4 ~~~~vLeiG--~g~G~~t~~la~~~~~~~~v~~iD 36 (125)
..++||-+| .|.|..++.++++. +.+|++++
T Consensus 167 ~g~~VlV~Gg~g~iG~~~~~~a~~~--Ga~Vi~~~ 199 (353)
T 4dup_A 167 EGESVLIHGGTSGIGTTAIQLARAF--GAEVYATA 199 (353)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHc--CCEEEEEe
Confidence 346899985 56788888899887 47899998
No 388
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=59.57 E-value=5.7 Score=28.11 Aligned_cols=60 Identities=8% Similarity=0.100 Sum_probs=44.0
Q ss_pred CEEEEEcCcccHHHHHHHhhCC-CCCEEEEEeCC---C----CCcEEEEecchHHHHHHHhhcCCCCCceeEEEEcCCC
Q 042171 6 KKTIEIGVFTGYSLFLTALTIP-EDGQITAIDAR---V----DHKINFIESEALSVLDQLLKDSENEVNFDYAFMDADK 76 (125)
Q Consensus 6 ~~vLeiG~g~G~~t~~la~~~~-~~~~v~~iD~~---~----~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~id~~~ 76 (125)
.+||-.| + |+.+..+++++- .+.+|++++.. . ..+++++.+|..+. . + ..+|.|+.-++.
T Consensus 6 ~~ilVtG-a-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~-~-~-------~~~d~vi~~a~~ 73 (286)
T 3ius_A 6 GTLLSFG-H-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPLLWPGEEP-S-L-------DGVTHLLISTAP 73 (286)
T ss_dssp CEEEEET-C-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTTEEEEESSSSCC-C-C-------TTCCEEEECCCC
T ss_pred CcEEEEC-C-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCCCeEEEeccccc-c-c-------CCCCEEEECCCc
Confidence 5799999 4 999999999874 34689999811 1 15688999988763 2 2 458999976654
No 389
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=59.45 E-value=21 Score=24.70 Aligned_cols=70 Identities=13% Similarity=0.090 Sum_probs=43.9
Q ss_pred CCCCEEEEEcCcccHHHHHHHhhC-CCCCEEEEEe----------CCCCCcEEEEecchHHH--HHHHhhcCCCCCceeE
Q 042171 3 LKLKKTIEIGVFTGYSLFLTALTI-PEDGQITAID----------ARVDHKINFIESEALSV--LDQLLKDSENEVNFDY 69 (125)
Q Consensus 3 ~~~~~vLeiG~g~G~~t~~la~~~-~~~~~v~~iD----------~~~~~~i~~~~gd~~~~--l~~~~~~~~~~~~fD~ 69 (125)
.+.++||-.|++.| .+..+++.+ ..+.+|+.++ ..+..++.++..|..+. +..+... ...+|.
T Consensus 12 ~~~k~vlVTGas~g-IG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~---~~~id~ 87 (249)
T 3f9i_A 12 LTGKTSLITGASSG-IGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISK---TSNLDI 87 (249)
T ss_dssp CTTCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHT---CSCCSE
T ss_pred CCCCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHh---cCCCCE
Confidence 45678888887544 455555554 3367899888 12345788888887642 2233221 357999
Q ss_pred EEEcCCC
Q 042171 70 AFMDADK 76 (125)
Q Consensus 70 v~id~~~ 76 (125)
++..+..
T Consensus 88 li~~Ag~ 94 (249)
T 3f9i_A 88 LVCNAGI 94 (249)
T ss_dssp EEECCC-
T ss_pred EEECCCC
Confidence 9987764
No 390
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=59.07 E-value=25 Score=26.13 Aligned_cols=31 Identities=16% Similarity=0.070 Sum_probs=22.9
Q ss_pred CCEEEEEcCc-ccHHHHHHHhhCCCCCEEEEEe
Q 042171 5 LKKTIEIGVF-TGYSLFLTALTIPEDGQITAID 36 (125)
Q Consensus 5 ~~~vLeiG~g-~G~~t~~la~~~~~~~~v~~iD 36 (125)
..+||-+|+| .|..++.+|++.+ +.+|+++|
T Consensus 187 g~~VlV~GaG~vG~~avqlak~~~-Ga~Vi~~~ 218 (359)
T 1h2b_A 187 GAYVAIVGVGGLGHIAVQLLKVMT-PATVIALD 218 (359)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHC-CCEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEe
Confidence 4688988864 4666777888772 46899998
No 391
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=59.03 E-value=29 Score=24.03 Aligned_cols=75 Identities=15% Similarity=0.010 Sum_probs=44.8
Q ss_pred CCCCCCEEEEEcCcccHHHHHHHhhC-CCCCEEEEEeC---C-------CCCcEEEEecchHHH--HHHHhhcC-CCCCc
Q 042171 1 MRLKLKKTIEIGVFTGYSLFLTALTI-PEDGQITAIDA---R-------VDHKINFIESEALSV--LDQLLKDS-ENEVN 66 (125)
Q Consensus 1 ~~~~~~~vLeiG~g~G~~t~~la~~~-~~~~~v~~iD~---~-------~~~~i~~~~gd~~~~--l~~~~~~~-~~~~~ 66 (125)
|..+.+.||-.|+. |..+..+++.+ ..+.+|+.++. . +..++.++..|..+. +..+.... ...++
T Consensus 8 ~~~~~k~vlVTGas-ggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 86 (265)
T 2o23_A 8 RSVKGLVAVITGGA-SGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGR 86 (265)
T ss_dssp CCCTTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred cCCCCCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCC
Confidence 44566789988875 55566666655 33678999981 1 134688888887542 22211100 00147
Q ss_pred eeEEEEcCCC
Q 042171 67 FDYAFMDADK 76 (125)
Q Consensus 67 fD~v~id~~~ 76 (125)
+|.++..+..
T Consensus 87 id~li~~Ag~ 96 (265)
T 2o23_A 87 VDVAVNCAGI 96 (265)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCcc
Confidence 9999987764
No 392
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=58.54 E-value=20 Score=25.34 Aligned_cols=72 Identities=17% Similarity=0.118 Sum_probs=44.3
Q ss_pred CCCCCCEEEEEcCcccHHHHHHHhhC-CCCCEEEEEeC--------------CCCCcEEEEecchHHH------HHHHhh
Q 042171 1 MRLKLKKTIEIGVFTGYSLFLTALTI-PEDGQITAIDA--------------RVDHKINFIESEALSV------LDQLLK 59 (125)
Q Consensus 1 ~~~~~~~vLeiG~g~G~~t~~la~~~-~~~~~v~~iD~--------------~~~~~i~~~~gd~~~~------l~~~~~ 59 (125)
|..+.++||-.|++.| .+..+++.+ ..+.+|+.++. ....++.++..|..+. +..+..
T Consensus 25 m~l~~k~vlITGas~g-IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 103 (271)
T 4iin_A 25 MQFTGKNVLITGASKG-IGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQ 103 (271)
T ss_dssp CCCSCCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cccCCCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence 4456778898887655 444555544 33678888871 1234788888887642 222211
Q ss_pred cCCCCCceeEEEEcCCC
Q 042171 60 DSENEVNFDYAFMDADK 76 (125)
Q Consensus 60 ~~~~~~~fD~v~id~~~ 76 (125)
. .+.+|.++..+..
T Consensus 104 ~---~g~id~li~nAg~ 117 (271)
T 4iin_A 104 S---DGGLSYLVNNAGV 117 (271)
T ss_dssp H---HSSCCEEEECCCC
T ss_pred h---cCCCCEEEECCCc
Confidence 1 2579999988764
No 393
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=58.36 E-value=16 Score=25.67 Aligned_cols=74 Identities=11% Similarity=0.007 Sum_probs=44.0
Q ss_pred CCCCCEEEEEcCcccHHHHHHHhhC-CCCCEEEEEeC-------------CCCCcEEEEecchHHH--HHHHhhcCCCCC
Q 042171 2 RLKLKKTIEIGVFTGYSLFLTALTI-PEDGQITAIDA-------------RVDHKINFIESEALSV--LDQLLKDSENEV 65 (125)
Q Consensus 2 ~~~~~~vLeiG~g~G~~t~~la~~~-~~~~~v~~iD~-------------~~~~~i~~~~gd~~~~--l~~~~~~~~~~~ 65 (125)
..+.+.+|-.|++.|. +..+++.+ ..+.+|+.++. ....++.++..|..+. +..+.......+
T Consensus 4 ~~~~k~vlVTGas~GI-G~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g 82 (252)
T 3h7a_A 4 TPRNATVAVIGAGDYI-GAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHA 82 (252)
T ss_dssp -CCSCEEEEECCSSHH-HHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEECCCchH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhC
Confidence 3456788988887654 44555544 33678999981 1135788888887642 122211000015
Q ss_pred ceeEEEEcCCC
Q 042171 66 NFDYAFMDADK 76 (125)
Q Consensus 66 ~fD~v~id~~~ 76 (125)
.+|.++..+..
T Consensus 83 ~id~lv~nAg~ 93 (252)
T 3h7a_A 83 PLEVTIFNVGA 93 (252)
T ss_dssp CEEEEEECCCC
T ss_pred CceEEEECCCc
Confidence 79999988774
No 394
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=58.19 E-value=19 Score=25.79 Aligned_cols=66 Identities=14% Similarity=0.185 Sum_probs=43.4
Q ss_pred CEEEEEcCcccHHHHHHHhhCC-CCCEEEEEeC-------CCCCcEEEEecchHHH--HHHHhhcCCCCCceeEEEEcCC
Q 042171 6 KKTIEIGVFTGYSLFLTALTIP-EDGQITAIDA-------RVDHKINFIESEALSV--LDQLLKDSENEVNFDYAFMDAD 75 (125)
Q Consensus 6 ~~vLeiG~g~G~~t~~la~~~~-~~~~v~~iD~-------~~~~~i~~~~gd~~~~--l~~~~~~~~~~~~fD~v~id~~ 75 (125)
++||-.|+ +|+.+..+++.+- .+.+|++++. .+..+++++.+|..+. +..+.. ...+|.|+.-++
T Consensus 2 ~~ilVtGa-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----~~~~d~vih~a~ 76 (330)
T 2c20_A 2 NSILICGG-AGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAITEGAKFYNGDLRDKAFLRDVFT----QENIEAVMHFAA 76 (330)
T ss_dssp CEEEEETT-TSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCTTSEEEECCTTCHHHHHHHHH----HSCEEEEEECCC
T ss_pred CEEEEECC-CcHHHHHHHHHHHhCCCEEEEEeCCCcCchhhcCCCcEEEECCCCCHHHHHHHHh----hcCCCEEEECCc
Confidence 36887774 6888888887763 3568999981 1223688999987653 233221 136999998766
Q ss_pred C
Q 042171 76 K 76 (125)
Q Consensus 76 ~ 76 (125)
.
T Consensus 77 ~ 77 (330)
T 2c20_A 77 D 77 (330)
T ss_dssp C
T ss_pred c
Confidence 4
No 395
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=57.93 E-value=17 Score=27.20 Aligned_cols=31 Identities=16% Similarity=0.006 Sum_probs=25.2
Q ss_pred CCEEEEEc--CcccHHHHHHHhhCCCCCEEEEEe
Q 042171 5 LKKTIEIG--VFTGYSLFLTALTIPEDGQITAID 36 (125)
Q Consensus 5 ~~~vLeiG--~g~G~~t~~la~~~~~~~~v~~iD 36 (125)
..+||-+| .+.|..++.+|+++. +.+|++++
T Consensus 172 g~~VlV~Ga~G~vG~~a~qlak~~~-g~~Vi~~~ 204 (363)
T 4dvj_A 172 APAILIVGGAGGVGSIAVQIARQRT-DLTVIATA 204 (363)
T ss_dssp EEEEEEESTTSHHHHHHHHHHHHHC-CSEEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhc-CCEEEEEe
Confidence 45899998 456899999999754 57999999
No 396
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=57.53 E-value=29 Score=24.31 Aligned_cols=70 Identities=13% Similarity=0.045 Sum_probs=43.6
Q ss_pred CCCCEEEEEcCcccHHHHHHHhhC-CCCCEEEEEe----------CCCCCcEEEEecchHHH------HHHHhhcCCCCC
Q 042171 3 LKLKKTIEIGVFTGYSLFLTALTI-PEDGQITAID----------ARVDHKINFIESEALSV------LDQLLKDSENEV 65 (125)
Q Consensus 3 ~~~~~vLeiG~g~G~~t~~la~~~-~~~~~v~~iD----------~~~~~~i~~~~gd~~~~------l~~~~~~~~~~~ 65 (125)
.+.+++|-.|++ |..+..+++.+ ..+.+|+.++ ..+..++.++..|..+. +...... .+
T Consensus 6 l~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~---~g 81 (259)
T 4e6p_A 6 LEGKSALITGSA-RGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEH---AG 81 (259)
T ss_dssp TTTCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHH---SS
T ss_pred CCCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHH---cC
Confidence 345788888865 44555555554 3367899888 12345678888887642 2222111 35
Q ss_pred ceeEEEEcCCC
Q 042171 66 NFDYAFMDADK 76 (125)
Q Consensus 66 ~fD~v~id~~~ 76 (125)
.+|.++..+..
T Consensus 82 ~id~lv~~Ag~ 92 (259)
T 4e6p_A 82 GLDILVNNAAL 92 (259)
T ss_dssp SCCEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 79999988775
No 397
>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*
Probab=56.73 E-value=47 Score=23.99 Aligned_cols=67 Identities=15% Similarity=0.148 Sum_probs=43.5
Q ss_pred CEEEEEcCcccHHHHHHHhhCCCC------CEEEEEe---CCC---CCcEEEEecchHHH--HHHHhhcCCCCCceeEEE
Q 042171 6 KKTIEIGVFTGYSLFLTALTIPED------GQITAID---ARV---DHKINFIESEALSV--LDQLLKDSENEVNFDYAF 71 (125)
Q Consensus 6 ~~vLeiG~g~G~~t~~la~~~~~~------~~v~~iD---~~~---~~~i~~~~gd~~~~--l~~~~~~~~~~~~fD~v~ 71 (125)
++||-.| |+|+.+..+++.+-.. .+|++++ ... ..+++++.+|..+. +..+... ...+|.|+
T Consensus 2 ~~vlVtG-atG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~~~~d~vi 77 (364)
T 2v6g_A 2 SVALIVG-VTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWHEDNPINYVQCDISDPDDSQAKLSP---LTDVTHVF 77 (364)
T ss_dssp EEEEEET-TTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSCCCSSCCEEEECCTTSHHHHHHHHTT---CTTCCEEE
T ss_pred CEEEEEC-CCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccccccCceEEEEeecCCHHHHHHHHhc---CCCCCEEE
Confidence 3677776 4699999999887543 4799999 111 24688999998653 3332210 12389998
Q ss_pred EcCCC
Q 042171 72 MDADK 76 (125)
Q Consensus 72 id~~~ 76 (125)
.-++.
T Consensus 78 h~a~~ 82 (364)
T 2v6g_A 78 YVTWA 82 (364)
T ss_dssp ECCCC
T ss_pred ECCCC
Confidence 76653
No 398
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=56.59 E-value=36 Score=21.73 Aligned_cols=64 Identities=14% Similarity=0.106 Sum_probs=42.6
Q ss_pred CCEEEEEcCcccHHHHHHHhhCC-CCCEEEEEeCC-------C----CCcEEEEecchHHH--HHHHhhcCCCCCceeEE
Q 042171 5 LKKTIEIGVFTGYSLFLTALTIP-EDGQITAIDAR-------V----DHKINFIESEALSV--LDQLLKDSENEVNFDYA 70 (125)
Q Consensus 5 ~~~vLeiG~g~G~~t~~la~~~~-~~~~v~~iD~~-------~----~~~i~~~~gd~~~~--l~~~~~~~~~~~~fD~v 70 (125)
..+|+-+|+ |..+..+++.+. .+.+|+.+|.. + ...+.++.||+.+. +... .-...|.|
T Consensus 3 ~~~vlI~G~--G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a-----~i~~ad~v 75 (153)
T 1id1_A 3 KDHFIVCGH--SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKA-----GIDRCRAI 75 (153)
T ss_dssp CSCEEEECC--SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHH-----TTTTCSEE
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHc-----ChhhCCEE
Confidence 457888875 888888888764 24679999932 1 23588999998643 3222 13568999
Q ss_pred EEcCC
Q 042171 71 FMDAD 75 (125)
Q Consensus 71 ~id~~ 75 (125)
++-..
T Consensus 76 i~~~~ 80 (153)
T 1id1_A 76 LALSD 80 (153)
T ss_dssp EECSS
T ss_pred EEecC
Confidence 98544
No 399
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=56.22 E-value=40 Score=22.20 Aligned_cols=89 Identities=9% Similarity=0.063 Sum_probs=46.5
Q ss_pred CcccHHHHH--HHhhCC-CCCEEEEEeC-----------CCCCcEEEEecchHH---HHHHHhhcCCCCCceeEEEEcCC
Q 042171 13 VFTGYSLFL--TALTIP-EDGQITAIDA-----------RVDHKINFIESEALS---VLDQLLKDSENEVNFDYAFMDAD 75 (125)
Q Consensus 13 ~g~G~~t~~--la~~~~-~~~~v~~iD~-----------~~~~~i~~~~gd~~~---~l~~~~~~~~~~~~fD~v~id~~ 75 (125)
.|.|-+|+. ||..+. .+.+|..+|. .-...+.++...... .+..+ ...||+|++|+.
T Consensus 11 gG~GKTt~a~~la~~la~~g~~vlliD~D~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l------~~~yD~viiD~~ 84 (206)
T 4dzz_A 11 GGSGKTTAVINIATALSRSGYNIAVVDTDPQMSLTNWSKAGKAAFDVFTAASEKDVYGIRKD------LADYDFAIVDGA 84 (206)
T ss_dssp TTSSHHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHTTSCCSSEEEECCSHHHHHTHHHH------TTTSSEEEEECC
T ss_pred CCccHHHHHHHHHHHHHHCCCeEEEEECCCCCCHHHHHhcCCCCCcEEecCcHHHHHHHHHh------cCCCCEEEEECC
Confidence 456666664 333332 2468999991 112335555544332 33333 356999999998
Q ss_pred CcCCHHHHhh-----h--CCCCCCcchHHHHHHHHHHhhc
Q 042171 76 KDNYCNYMRE-----Q--VPDHFRGSSKQAILDLNRSLVD 108 (125)
Q Consensus 76 ~~~~~~~~~~-----~--~~~~~~~~~~~~~~~~~~~l~~ 108 (125)
.......... . ++-...... ..++.+.+.+.+
T Consensus 85 ~~~~~~~~~~l~~ad~viiv~~~~~~~-~~~~~~~~~l~~ 123 (206)
T 4dzz_A 85 GSLSVITSAAVMVSDLVIIPVTPSPLD-FSAAGSVVTVLE 123 (206)
T ss_dssp SSSSHHHHHHHHHCSEEEEEECSCTTT-HHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHCCEEEEEecCCHHH-HHHHHHHHHHHH
Confidence 7654332221 0 111111124 666777776654
No 400
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=56.19 E-value=48 Score=24.16 Aligned_cols=69 Identities=9% Similarity=-0.019 Sum_probs=43.6
Q ss_pred CCCEEEEEcCcccHHHHHHHhhC-CCCCEEEEEe---------------CCCCCcEEEEecchHHH------HHHHhhcC
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTI-PEDGQITAID---------------ARVDHKINFIESEALSV------LDQLLKDS 61 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~-~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~------l~~~~~~~ 61 (125)
+.+.||-.|++.| .+..+++.+ ..+.+|+.++ .+...++.++..|..+. +......
T Consensus 7 ~~k~vlVTGas~g-IG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~- 84 (319)
T 3ioy_A 7 AGRTAFVTGGANG-VGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEAR- 84 (319)
T ss_dssp TTCEEEEETTTST-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred CCCEEEEcCCchH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHh-
Confidence 5678898887644 455666654 3467898888 11223788888887642 1222111
Q ss_pred CCCCceeEEEEcCCC
Q 042171 62 ENEVNFDYAFMDADK 76 (125)
Q Consensus 62 ~~~~~fD~v~id~~~ 76 (125)
.+++|.++..+..
T Consensus 85 --~g~id~lv~nAg~ 97 (319)
T 3ioy_A 85 --FGPVSILCNNAGV 97 (319)
T ss_dssp --TCCEEEEEECCCC
T ss_pred --CCCCCEEEECCCc
Confidence 2579999998874
No 401
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=55.86 E-value=28 Score=25.66 Aligned_cols=31 Identities=16% Similarity=0.028 Sum_probs=24.2
Q ss_pred CCCEEEEEc--CcccHHHHHHHhhCCCCCEEEEEe
Q 042171 4 KLKKTIEIG--VFTGYSLFLTALTIPEDGQITAID 36 (125)
Q Consensus 4 ~~~~vLeiG--~g~G~~t~~la~~~~~~~~v~~iD 36 (125)
..++||-+| .+.|..++.+|++.+ .+|+++.
T Consensus 150 ~g~~VlV~Ga~g~iG~~~~q~a~~~G--a~Vi~~~ 182 (343)
T 3gaz_A 150 DGQTVLIQGGGGGVGHVAIQIALARG--ARVFATA 182 (343)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEE
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCC--CEEEEEe
Confidence 356899999 467889999999874 6887775
No 402
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=55.79 E-value=17 Score=26.48 Aligned_cols=30 Identities=7% Similarity=-0.131 Sum_probs=24.0
Q ss_pred CCEEEEEc--CcccHHHHHHHhhCCCCCEEEEEe
Q 042171 5 LKKTIEIG--VFTGYSLFLTALTIPEDGQITAID 36 (125)
Q Consensus 5 ~~~vLeiG--~g~G~~t~~la~~~~~~~~v~~iD 36 (125)
.++||-+| .|.|..++.+++.. +.+|++++
T Consensus 141 g~~vlV~Ga~ggiG~~~~~~a~~~--G~~V~~~~ 172 (327)
T 1qor_A 141 DEQFLFHAAAGGVGLIACQWAKAL--GAKLIGTV 172 (327)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHH--TCEEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEe
Confidence 46899999 56778888888876 46899998
No 403
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=55.35 E-value=20 Score=25.40 Aligned_cols=70 Identities=13% Similarity=0.142 Sum_probs=42.1
Q ss_pred CCCCEEEEEcCcccHHHHHHHhhC-CCCCEEEEEe----------CCCCCcEEEEecchHHH--HHHHhhcCCCCCceeE
Q 042171 3 LKLKKTIEIGVFTGYSLFLTALTI-PEDGQITAID----------ARVDHKINFIESEALSV--LDQLLKDSENEVNFDY 69 (125)
Q Consensus 3 ~~~~~vLeiG~g~G~~t~~la~~~-~~~~~v~~iD----------~~~~~~i~~~~gd~~~~--l~~~~~~~~~~~~fD~ 69 (125)
.+.+.+|-.|++.| .+..+++.+ ..+.+|+.++ ..+..++.++..|..+. +..+.......+..|.
T Consensus 28 l~~k~vlVTGas~G-IG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~ 106 (281)
T 3ppi_A 28 FEGASAIVSGGAGG-LGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRY 106 (281)
T ss_dssp GTTEEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEEE
T ss_pred cCCCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCe
Confidence 35567888887655 445555544 3367899998 12345788888887642 1221111011357999
Q ss_pred EEEc
Q 042171 70 AFMD 73 (125)
Q Consensus 70 v~id 73 (125)
++..
T Consensus 107 lv~~ 110 (281)
T 3ppi_A 107 AVVA 110 (281)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 9987
No 404
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=54.86 E-value=16 Score=27.24 Aligned_cols=31 Identities=23% Similarity=0.146 Sum_probs=22.5
Q ss_pred CCEEEEEcCcccHHHHH--HHhhCCCCCEEEEEe
Q 042171 5 LKKTIEIGVFTGYSLFL--TALTIPEDGQITAID 36 (125)
Q Consensus 5 ~~~vLeiG~g~G~~t~~--la~~~~~~~~v~~iD 36 (125)
.++|+-||.|++-.+.. |++.- .+.+|+-||
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~-~~~~Vtlie 34 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLAD-PSIEVTLIE 34 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHC-TTSEEEEEC
T ss_pred cCEEEEECCcHHHHHHHHHHHhcC-cCCeEEEEe
Confidence 47899999998655444 44433 368999999
No 405
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=54.56 E-value=25 Score=26.24 Aligned_cols=31 Identities=16% Similarity=0.084 Sum_probs=24.8
Q ss_pred CCCEEEEEc--CcccHHHHHHHhhCCCCCEEEEEe
Q 042171 4 KLKKTIEIG--VFTGYSLFLTALTIPEDGQITAID 36 (125)
Q Consensus 4 ~~~~vLeiG--~g~G~~t~~la~~~~~~~~v~~iD 36 (125)
+.++||-+| .+.|..++.+|++.+ .+|++++
T Consensus 183 ~g~~VlV~Ga~G~vG~~~~qla~~~G--a~Vi~~~ 215 (375)
T 2vn8_A 183 TGKRVLILGASGGVGTFAIQVMKAWD--AHVTAVC 215 (375)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCC--CEEEEEe
Confidence 346899998 567888899999874 6888887
No 406
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=54.56 E-value=8 Score=30.55 Aligned_cols=32 Identities=16% Similarity=0.151 Sum_probs=25.7
Q ss_pred CCEEEEEcCcccHHHHHHHhhCCC----CCEEEEEe
Q 042171 5 LKKTIEIGVFTGYSLFLTALTIPE----DGQITAID 36 (125)
Q Consensus 5 ~~~vLeiG~g~G~~t~~la~~~~~----~~~v~~iD 36 (125)
+-+|+|+|.|.|..+.-+.+.+.. ..+++.||
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE 173 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVD 173 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEEC
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEE
Confidence 468999999999999988876531 24789999
No 407
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=54.33 E-value=16 Score=29.00 Aligned_cols=36 Identities=19% Similarity=0.142 Sum_probs=25.3
Q ss_pred CCCCCCEEEEEcCcccHHHHHHH--hhCCCCCEEEEEe
Q 042171 1 MRLKLKKTIEIGVFTGYSLFLTA--LTIPEDGQITAID 36 (125)
Q Consensus 1 ~~~~~~~vLeiG~g~G~~t~~la--~~~~~~~~v~~iD 36 (125)
|..+..+|+-||.|+.-+++.++ +..+.+.+|+-+|
T Consensus 21 M~~~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE 58 (550)
T 2e4g_A 21 MSGKIDKILIVGGGTAGWMAASYLGKALQGTADITLLQ 58 (550)
T ss_dssp CCSCCCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEE
T ss_pred cCCCCCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEe
Confidence 44456789999999876665543 3331368999999
No 408
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=54.07 E-value=56 Score=23.19 Aligned_cols=75 Identities=16% Similarity=0.093 Sum_probs=44.6
Q ss_pred CCCCCCEEEEEcCcccHHHHHHHhhC-CCCCEEEEEe----------CCCCCcEEEEecchHHH--HHHHhhcC-CCCCc
Q 042171 1 MRLKLKKTIEIGVFTGYSLFLTALTI-PEDGQITAID----------ARVDHKINFIESEALSV--LDQLLKDS-ENEVN 66 (125)
Q Consensus 1 ~~~~~~~vLeiG~g~G~~t~~la~~~-~~~~~v~~iD----------~~~~~~i~~~~gd~~~~--l~~~~~~~-~~~~~ 66 (125)
|..+.+.+|-.|.+.| .+..+++.+ ..+.+|+.++ ..+..++.++..|..+. +..+.... ...++
T Consensus 23 ~~l~~k~vlVTGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 101 (277)
T 4dqx_A 23 MDLNQRVCIVTGGGSG-IGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGR 101 (277)
T ss_dssp CTTTTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCCCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 4456678898887655 445555544 3367899998 11345688888887642 11111100 00247
Q ss_pred eeEEEEcCCC
Q 042171 67 FDYAFMDADK 76 (125)
Q Consensus 67 fD~v~id~~~ 76 (125)
+|.++..+..
T Consensus 102 iD~lv~nAg~ 111 (277)
T 4dqx_A 102 VDVLVNNAGF 111 (277)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCc
Confidence 9999988774
No 409
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=53.94 E-value=53 Score=22.90 Aligned_cols=70 Identities=16% Similarity=0.051 Sum_probs=42.7
Q ss_pred CCCCEEEEEcCcccHHHHHHHhhC-CCCCEEEEEe-------------CCCCCcEEEEecchHHH------HHHHhhcCC
Q 042171 3 LKLKKTIEIGVFTGYSLFLTALTI-PEDGQITAID-------------ARVDHKINFIESEALSV------LDQLLKDSE 62 (125)
Q Consensus 3 ~~~~~vLeiG~g~G~~t~~la~~~-~~~~~v~~iD-------------~~~~~~i~~~~gd~~~~------l~~~~~~~~ 62 (125)
.+.+.+|-.|.+.| .+..+++.+ ..+.+|+.++ .....++.++..|..+. +......
T Consensus 10 l~~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-- 86 (256)
T 3gaf_A 10 LNDAVAIVTGAAAG-IGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQ-- 86 (256)
T ss_dssp CTTCEEEECSCSSH-HHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH--
T ss_pred CCCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH--
Confidence 45678888887655 444444443 2367899988 11235788888887642 1221111
Q ss_pred CCCceeEEEEcCCC
Q 042171 63 NEVNFDYAFMDADK 76 (125)
Q Consensus 63 ~~~~fD~v~id~~~ 76 (125)
.++.|.++..+..
T Consensus 87 -~g~id~lv~nAg~ 99 (256)
T 3gaf_A 87 -FGKITVLVNNAGG 99 (256)
T ss_dssp -HSCCCEEEECCCC
T ss_pred -cCCCCEEEECCCC
Confidence 2579999988764
No 410
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=53.63 E-value=15 Score=27.50 Aligned_cols=35 Identities=9% Similarity=-0.052 Sum_probs=25.1
Q ss_pred CCCCCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe
Q 042171 1 MRLKLKKTIEIGVFTGYSLFLTALTIPEDGQITAID 36 (125)
Q Consensus 1 ~~~~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD 36 (125)
|+....+|+-||.|.+-.++.++.+-. +-+|+-+|
T Consensus 1 M~~~~~~V~IVGaG~aGl~~A~~L~~~-G~~v~v~E 35 (397)
T 2vou_A 1 MSPTTDRIAVVGGSISGLTAALMLRDA-GVDVDVYE 35 (397)
T ss_dssp -CCCCSEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred CCCCCCcEEEECCCHHHHHHHHHHHhC-CCCEEEEe
Confidence 566678999999987766665544332 57899999
No 411
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=53.62 E-value=54 Score=23.23 Aligned_cols=64 Identities=14% Similarity=0.006 Sum_probs=42.2
Q ss_pred CEEEEEcCcccHHHHHHHhhCC-CCCEEEEEeCC--C--CCcEEEEecchH-HHHHHHhhcCCCCCceeEEEEcCCC
Q 042171 6 KKTIEIGVFTGYSLFLTALTIP-EDGQITAIDAR--V--DHKINFIESEAL-SVLDQLLKDSENEVNFDYAFMDADK 76 (125)
Q Consensus 6 ~~vLeiG~g~G~~t~~la~~~~-~~~~v~~iD~~--~--~~~i~~~~gd~~-~~l~~~~~~~~~~~~fD~v~id~~~ 76 (125)
++||-.|. +|+.+..+++.+- .+.+|++++.. . ..+++++.+|.. +.+..+ -..+|.|+.-++.
T Consensus 3 ~~vlVtGa-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~Dl~~~~~~~~------~~~~d~Vih~a~~ 72 (311)
T 3m2p_A 3 LKIAVTGG-TGFLGQYVVESIKNDGNTPIILTRSIGNKAINDYEYRVSDYTLEDLINQ------LNDVDAVVHLAAT 72 (311)
T ss_dssp CEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCCC-----CCEEEECCCCHHHHHHH------TTTCSEEEECCCC
T ss_pred CEEEEECC-CcHHHHHHHHHHHhCCCEEEEEeCCCCcccCCceEEEEccccHHHHHHh------hcCCCEEEEcccc
Confidence 46888774 6888888887763 34689999821 1 126888999875 222222 2479999976654
No 412
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=53.42 E-value=54 Score=22.85 Aligned_cols=73 Identities=7% Similarity=-0.057 Sum_probs=43.2
Q ss_pred CCCCEEEEEcCcccHHHHHHHhhC-CCCCEEEEEe-------------CCCCCcEEEEecchHHH--HHHHhhc-CCCCC
Q 042171 3 LKLKKTIEIGVFTGYSLFLTALTI-PEDGQITAID-------------ARVDHKINFIESEALSV--LDQLLKD-SENEV 65 (125)
Q Consensus 3 ~~~~~vLeiG~g~G~~t~~la~~~-~~~~~v~~iD-------------~~~~~~i~~~~gd~~~~--l~~~~~~-~~~~~ 65 (125)
.+.+.||-.|++ |..+..+++.+ ..+.+|+.++ .....++.++..|..+. +..+... ....+
T Consensus 27 l~~k~vlITGas-~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 105 (262)
T 3rkr_A 27 LSGQVAVVTGAS-RGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHG 105 (262)
T ss_dssp TTTCEEEESSTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcC
Confidence 345678888865 44556666654 3367899888 11235788888887642 1111100 00025
Q ss_pred ceeEEEEcCCC
Q 042171 66 NFDYAFMDADK 76 (125)
Q Consensus 66 ~fD~v~id~~~ 76 (125)
+.|.++..+..
T Consensus 106 ~id~lv~~Ag~ 116 (262)
T 3rkr_A 106 RCDVLVNNAGV 116 (262)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 79999987765
No 413
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=53.35 E-value=51 Score=22.50 Aligned_cols=65 Identities=14% Similarity=0.158 Sum_probs=43.0
Q ss_pred CEEEEEcCcccHHHHHHHhhCCCC--CEEEEEe-------CCCCCcEEEEecchHHH--HHHHhhcCCCCCceeEEEEcC
Q 042171 6 KKTIEIGVFTGYSLFLTALTIPED--GQITAID-------ARVDHKINFIESEALSV--LDQLLKDSENEVNFDYAFMDA 74 (125)
Q Consensus 6 ~~vLeiG~g~G~~t~~la~~~~~~--~~v~~iD-------~~~~~~i~~~~gd~~~~--l~~~~~~~~~~~~fD~v~id~ 74 (125)
++||-.|. +|..+..+++.+-.. .+|++++ .-...+++++.+|..+. +..+. ..+|.||..+
T Consensus 24 k~vlVtGa-tG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~------~~~D~vv~~a 96 (236)
T 3qvo_A 24 KNVLILGA-GGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQAM------QGQDIVYANL 96 (236)
T ss_dssp EEEEEETT-TSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHHH------TTCSEEEEEC
T ss_pred cEEEEEeC-CcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHHh------cCCCEEEEcC
Confidence 46777774 577777777776434 4788888 11235799999998753 23321 4589999876
Q ss_pred CCc
Q 042171 75 DKD 77 (125)
Q Consensus 75 ~~~ 77 (125)
...
T Consensus 97 ~~~ 99 (236)
T 3qvo_A 97 TGE 99 (236)
T ss_dssp CST
T ss_pred CCC
Confidence 653
No 414
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=53.00 E-value=11 Score=28.45 Aligned_cols=30 Identities=13% Similarity=-0.084 Sum_probs=22.2
Q ss_pred CCEEEEEc--C-cccHHHHHHHhhCCCCCEEEEEe
Q 042171 5 LKKTIEIG--V-FTGYSLFLTALTIPEDGQITAID 36 (125)
Q Consensus 5 ~~~vLeiG--~-g~G~~t~~la~~~~~~~~v~~iD 36 (125)
..+||-+| + +.|..++.+|++.+ .+|++++
T Consensus 171 g~~vlV~gag~G~vG~~a~q~a~~~G--a~Vi~~~ 203 (379)
T 3iup_A 171 GHSALVHTAAASNLGQMLNQICLKDG--IKLVNIV 203 (379)
T ss_dssp TCSCEEESSTTSHHHHHHHHHHHHHT--CCEEEEE
T ss_pred CCEEEEECCCCCHHHHHHHHHHHHCC--CEEEEEE
Confidence 45788884 3 46777888888774 6899998
No 415
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=52.89 E-value=29 Score=25.13 Aligned_cols=68 Identities=19% Similarity=0.251 Sum_probs=44.4
Q ss_pred CCEEEEEcCcccHHHHHHHhhCC-CCCEEEEEe---CC----CC--CcEEEEecchHHH--HHHHhhcCCCCCceeEEEE
Q 042171 5 LKKTIEIGVFTGYSLFLTALTIP-EDGQITAID---AR----VD--HKINFIESEALSV--LDQLLKDSENEVNFDYAFM 72 (125)
Q Consensus 5 ~~~vLeiG~g~G~~t~~la~~~~-~~~~v~~iD---~~----~~--~~i~~~~gd~~~~--l~~~~~~~~~~~~fD~v~i 72 (125)
.++||-.| |+|..+..+++.+- .+.+|++++ .. +. .+++++.+|..+. +..+.. ...+|.|+.
T Consensus 21 ~~~vlVTG-atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~----~~~~D~vih 95 (333)
T 2q1w_A 21 MKKVFITG-ICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIG----DLQPDAVVH 95 (333)
T ss_dssp CCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHH----HHCCSEEEE
T ss_pred CCEEEEeC-CccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHh----ccCCcEEEE
Confidence 45788887 46888888877663 357899998 11 11 4788999987753 223221 134999998
Q ss_pred cCCCc
Q 042171 73 DADKD 77 (125)
Q Consensus 73 d~~~~ 77 (125)
-++..
T Consensus 96 ~A~~~ 100 (333)
T 2q1w_A 96 TAASY 100 (333)
T ss_dssp CCCCC
T ss_pred Cceec
Confidence 76643
No 416
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=52.66 E-value=27 Score=25.67 Aligned_cols=68 Identities=15% Similarity=0.138 Sum_probs=45.9
Q ss_pred CCCCEEEEEcCcccHHHHHHHhhCCC--CC-EEEEEeCC----------C-CCcEEEEecchHHH--HHHHhhcCCCCCc
Q 042171 3 LKLKKTIEIGVFTGYSLFLTALTIPE--DG-QITAIDAR----------V-DHKINFIESEALSV--LDQLLKDSENEVN 66 (125)
Q Consensus 3 ~~~~~vLeiG~g~G~~t~~la~~~~~--~~-~v~~iD~~----------~-~~~i~~~~gd~~~~--l~~~~~~~~~~~~ 66 (125)
.+.++||-.|+ +|..+.++++.+-. +. +|++++.. + ..+++++.+|..+. +..+ -..
T Consensus 19 ~~~k~vlVTGa-tG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~------~~~ 91 (344)
T 2gn4_A 19 LDNQTILITGG-TGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYA------LEG 91 (344)
T ss_dssp TTTCEEEEETT-TSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHH------TTT
T ss_pred hCCCEEEEECC-CcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHH------Hhc
Confidence 34578888774 68888888876632 33 89998811 1 25799999998753 2232 246
Q ss_pred eeEEEEcCCCc
Q 042171 67 FDYAFMDADKD 77 (125)
Q Consensus 67 fD~v~id~~~~ 77 (125)
+|.||.-++..
T Consensus 92 ~D~Vih~Aa~~ 102 (344)
T 2gn4_A 92 VDICIHAAALK 102 (344)
T ss_dssp CSEEEECCCCC
T ss_pred CCEEEECCCCC
Confidence 89999887754
No 417
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=52.54 E-value=34 Score=24.19 Aligned_cols=73 Identities=11% Similarity=0.033 Sum_probs=42.9
Q ss_pred CCCEEEEEcCcccHHHHHHHhhC-CCCCEEEEEe--------------CCCCCcEEEEecchHHH---HHHHhhcC-CCC
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTI-PEDGQITAID--------------ARVDHKINFIESEALSV---LDQLLKDS-ENE 64 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~-~~~~~v~~iD--------------~~~~~~i~~~~gd~~~~---l~~~~~~~-~~~ 64 (125)
+.+.||-.|++.| .+..+++.+ ..+.+|+.++ .....++.++..|..+. +..+.... ...
T Consensus 11 ~~k~vlITGas~G-IG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~ 89 (311)
T 3o26_A 11 KRRCAVVTGGNKG-IGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHF 89 (311)
T ss_dssp -CCEEEESSCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred CCcEEEEecCCch-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhC
Confidence 4567888886644 555555554 3367899988 11225788888887542 22221100 002
Q ss_pred CceeEEEEcCCCc
Q 042171 65 VNFDYAFMDADKD 77 (125)
Q Consensus 65 ~~fD~v~id~~~~ 77 (125)
+++|.++..+...
T Consensus 90 g~iD~lv~nAg~~ 102 (311)
T 3o26_A 90 GKLDILVNNAGVA 102 (311)
T ss_dssp SSCCEEEECCCCC
T ss_pred CCCCEEEECCccc
Confidence 5799999988753
No 418
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=52.44 E-value=51 Score=22.63 Aligned_cols=73 Identities=12% Similarity=0.105 Sum_probs=43.4
Q ss_pred CCCCEEEEEcCcccHHHHHHHhhC-CCCCEEEEEeC-------------CCCCcEEEEecchHHH--HHHHhhcC-CCCC
Q 042171 3 LKLKKTIEIGVFTGYSLFLTALTI-PEDGQITAIDA-------------RVDHKINFIESEALSV--LDQLLKDS-ENEV 65 (125)
Q Consensus 3 ~~~~~vLeiG~g~G~~t~~la~~~-~~~~~v~~iD~-------------~~~~~i~~~~gd~~~~--l~~~~~~~-~~~~ 65 (125)
.+.+.||-.|++ |..+..+++.+ ..+.+|+.++. ....++.++.+|..+. +..+.... ...+
T Consensus 11 l~~k~vlItGas-ggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (260)
T 3awd_A 11 LDNRVAIVTGGA-QNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEG 89 (260)
T ss_dssp CTTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 456788888865 55666666655 33678999881 1134688888887642 12211100 0014
Q ss_pred ceeEEEEcCCC
Q 042171 66 NFDYAFMDADK 76 (125)
Q Consensus 66 ~fD~v~id~~~ 76 (125)
++|.|+..+..
T Consensus 90 ~id~vi~~Ag~ 100 (260)
T 3awd_A 90 RVDILVACAGI 100 (260)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 78999987763
No 419
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=52.30 E-value=28 Score=25.74 Aligned_cols=30 Identities=3% Similarity=-0.220 Sum_probs=24.0
Q ss_pred CCEEEEEc--CcccHHHHHHHhhCCCCCEEEEEe
Q 042171 5 LKKTIEIG--VFTGYSLFLTALTIPEDGQITAID 36 (125)
Q Consensus 5 ~~~vLeiG--~g~G~~t~~la~~~~~~~~v~~iD 36 (125)
.++||-+| .|.|..++.+++.. +.+|++++
T Consensus 163 g~~vlV~Ga~ggiG~~~~~~a~~~--Ga~Vi~~~ 194 (354)
T 2j8z_A 163 GDYVLIHAGLSGVGTAAIQLTRMA--GAIPLVTA 194 (354)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEE
T ss_pred CCEEEEECCccHHHHHHHHHHHHc--CCEEEEEe
Confidence 46899998 46788888888876 47899998
No 420
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=52.21 E-value=28 Score=24.78 Aligned_cols=74 Identities=22% Similarity=0.139 Sum_probs=43.2
Q ss_pred CCCCEEEEEcCcccHHHHHHHhhC-CCCCEEEEEe-------------CCCCCcEEEEecchHHH--HHHHhhcC-CCCC
Q 042171 3 LKLKKTIEIGVFTGYSLFLTALTI-PEDGQITAID-------------ARVDHKINFIESEALSV--LDQLLKDS-ENEV 65 (125)
Q Consensus 3 ~~~~~vLeiG~g~G~~t~~la~~~-~~~~~v~~iD-------------~~~~~~i~~~~gd~~~~--l~~~~~~~-~~~~ 65 (125)
.+.+.+|-.|.+.| .+..+++.+ ..+.+|+.++ .....++.++..|..+. +..+.... ...+
T Consensus 30 l~gk~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g 108 (276)
T 3r1i_A 30 LSGKRALITGASTG-IGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELG 108 (276)
T ss_dssp CTTCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 45678888887655 444555544 3367899888 11234677888887642 12211100 0024
Q ss_pred ceeEEEEcCCCc
Q 042171 66 NFDYAFMDADKD 77 (125)
Q Consensus 66 ~fD~v~id~~~~ 77 (125)
++|.++..+...
T Consensus 109 ~iD~lvnnAg~~ 120 (276)
T 3r1i_A 109 GIDIAVCNAGIV 120 (276)
T ss_dssp CCSEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 799999887653
No 421
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=52.15 E-value=60 Score=22.97 Aligned_cols=74 Identities=11% Similarity=0.015 Sum_probs=43.7
Q ss_pred CCCCEEEEEcCcccHHHHHHHhhC-CCCCEEEEEe------------CCCCCcEEEEecchHHH--HHHHhhcCCCCCce
Q 042171 3 LKLKKTIEIGVFTGYSLFLTALTI-PEDGQITAID------------ARVDHKINFIESEALSV--LDQLLKDSENEVNF 67 (125)
Q Consensus 3 ~~~~~vLeiG~g~G~~t~~la~~~-~~~~~v~~iD------------~~~~~~i~~~~gd~~~~--l~~~~~~~~~~~~f 67 (125)
.+.+.+|-.|.+.| .+..+++.+ ..+.+|+.++ .....++.++..|..+. +..+.......+++
T Consensus 29 l~gk~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~i 107 (273)
T 3uf0_A 29 LAGRTAVVTGAGSG-IGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRRV 107 (273)
T ss_dssp CTTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCC
T ss_pred CCCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCC
Confidence 45678898887655 444555544 3367898888 12235788888887642 11111000002579
Q ss_pred eEEEEcCCCc
Q 042171 68 DYAFMDADKD 77 (125)
Q Consensus 68 D~v~id~~~~ 77 (125)
|.++..+...
T Consensus 108 D~lv~nAg~~ 117 (273)
T 3uf0_A 108 DVLVNNAGII 117 (273)
T ss_dssp CEEEECCCCC
T ss_pred cEEEECCCCC
Confidence 9999887643
No 422
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=51.55 E-value=55 Score=23.17 Aligned_cols=70 Identities=11% Similarity=0.079 Sum_probs=41.7
Q ss_pred CCCCEEEEEcCcccHHHHHHHhhC-CCCCEEEEEe-------------CCCCCcEEEEecchHHH------HHHHhhcCC
Q 042171 3 LKLKKTIEIGVFTGYSLFLTALTI-PEDGQITAID-------------ARVDHKINFIESEALSV------LDQLLKDSE 62 (125)
Q Consensus 3 ~~~~~vLeiG~g~G~~t~~la~~~-~~~~~v~~iD-------------~~~~~~i~~~~gd~~~~------l~~~~~~~~ 62 (125)
.+.+.+|-.|++.| .+..+++.+ ..+.+|+.++ .....++.++..|..+. +......
T Consensus 22 ~~~k~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-- 98 (279)
T 3sju_A 22 SRPQTAFVTGVSSG-IGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVER-- 98 (279)
T ss_dssp ---CEEEEESTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH--
T ss_pred cCCCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH--
Confidence 35678888887655 444455544 3367899888 12245788888887642 1222111
Q ss_pred CCCceeEEEEcCCC
Q 042171 63 NEVNFDYAFMDADK 76 (125)
Q Consensus 63 ~~~~fD~v~id~~~ 76 (125)
.++.|.++..+..
T Consensus 99 -~g~id~lv~nAg~ 111 (279)
T 3sju_A 99 -FGPIGILVNSAGR 111 (279)
T ss_dssp -HCSCCEEEECCCC
T ss_pred -cCCCcEEEECCCC
Confidence 2579999988764
No 423
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=51.16 E-value=59 Score=24.26 Aligned_cols=34 Identities=21% Similarity=0.204 Sum_probs=21.0
Q ss_pred CCCCCCEEEEEcCcccHHHHHHHhhC---CCCCEEEEEe
Q 042171 1 MRLKLKKTIEIGVFTGYSLFLTALTI---PEDGQITAID 36 (125)
Q Consensus 1 ~~~~~~~vLeiG~g~G~~t~~la~~~---~~~~~v~~iD 36 (125)
|..++.+|.-||+| ..+..+|..+ +--.+++.+|
T Consensus 1 m~~~~~kI~ViGaG--~vG~~~a~~l~~~~~~~~l~l~D 37 (326)
T 3pqe_A 1 MNKHVNKVALIGAG--FVGSSYAFALINQGITDELVVID 37 (326)
T ss_dssp -CCSCCEEEEECCS--HHHHHHHHHHHHHTCCSEEEEEC
T ss_pred CCCCCCEEEEECCC--HHHHHHHHHHHhCCCCceEEEEe
Confidence 66778899999974 4444333332 1124899999
No 424
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=51.12 E-value=45 Score=26.50 Aligned_cols=47 Identities=11% Similarity=-0.014 Sum_probs=33.8
Q ss_pred CCEEEEEcCcccHHHHHHHhhCCCCCE-EEEEe------------CCCCCcEEEEecchHHHH
Q 042171 5 LKKTIEIGVFTGYSLFLTALTIPEDGQ-ITAID------------ARVDHKINFIESEALSVL 54 (125)
Q Consensus 5 ~~~vLeiG~g~G~~t~~la~~~~~~~~-v~~iD------------~~~~~~i~~~~gd~~~~l 54 (125)
.-+++|+-||.|-.++-+.++ +.+ |.++| .+......++.+|..+..
T Consensus 88 ~~~viDLFaG~GGlslG~~~a---G~~~v~avE~d~~A~~ty~~N~~~~p~~~~~~~DI~~i~ 147 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESI---GGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIRDIT 147 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTT---TEEEEEEECCCHHHHHHHHHHSCCCTTTCEEESCTHHHH
T ss_pred cceEEEecCCccHHHHHHHHC---CCEEEEEEeCCHHHHHHHHHhcccCCCcceeccchhhhh
Confidence 348999999999999988775 444 78899 221233456778888764
No 425
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=51.08 E-value=61 Score=22.71 Aligned_cols=71 Identities=23% Similarity=0.105 Sum_probs=43.8
Q ss_pred CCCCCEEEEEcCcccHHHHHHHhhC-CCCCEEEEEe----------------CCCCCcEEEEecchHHH------HHHHh
Q 042171 2 RLKLKKTIEIGVFTGYSLFLTALTI-PEDGQITAID----------------ARVDHKINFIESEALSV------LDQLL 58 (125)
Q Consensus 2 ~~~~~~vLeiG~g~G~~t~~la~~~-~~~~~v~~iD----------------~~~~~~i~~~~gd~~~~------l~~~~ 58 (125)
..+.+.+|-.|.+.| .+..+++.+ ..+.+|+.++ .....++.++..|..+. +..+.
T Consensus 8 ~l~~k~vlVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 86 (262)
T 3ksu_A 8 DLKNKVIVIAGGIKN-LGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAE 86 (262)
T ss_dssp CCTTCEEEEETCSSH-HHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCch-HHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 345678898898766 455556554 4467888875 11235788888876542 12221
Q ss_pred hcCCCCCceeEEEEcCCC
Q 042171 59 KDSENEVNFDYAFMDADK 76 (125)
Q Consensus 59 ~~~~~~~~fD~v~id~~~ 76 (125)
.. .++.|.++..+..
T Consensus 87 ~~---~g~iD~lvnnAg~ 101 (262)
T 3ksu_A 87 KE---FGKVDIAINTVGK 101 (262)
T ss_dssp HH---HCSEEEEEECCCC
T ss_pred HH---cCCCCEEEECCCC
Confidence 11 2579999988764
No 426
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=50.94 E-value=50 Score=24.91 Aligned_cols=68 Identities=10% Similarity=0.121 Sum_probs=45.6
Q ss_pred CCEEEEEcCcccHHHHHHHhhCCC-C-CEEEEEeC----------------C-CCCcEEEEecchHHH--HHHHhhcCCC
Q 042171 5 LKKTIEIGVFTGYSLFLTALTIPE-D-GQITAIDA----------------R-VDHKINFIESEALSV--LDQLLKDSEN 63 (125)
Q Consensus 5 ~~~vLeiG~g~G~~t~~la~~~~~-~-~~v~~iD~----------------~-~~~~i~~~~gd~~~~--l~~~~~~~~~ 63 (125)
.++||-.|. +|..+..+++.+-. + .+|++++. + ...+++++.+|..+. +..+..
T Consensus 35 ~k~vLVTGa-tG~IG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~---- 109 (399)
T 3nzo_A 35 QSRFLVLGG-AGSIGQAVTKEIFKRNPQKLHVVDISENNMVELVRDIRSSFGYINGDFQTFALDIGSIEYDAFIKA---- 109 (399)
T ss_dssp TCEEEEETT-TSHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHHTCCCSSEEEEECCCTTSHHHHHHHHH----
T ss_pred CCEEEEEcC-ChHHHHHHHHHHHHCCCCEEEEEECCcchHHHHHHHHHHhcCCCCCcEEEEEEeCCCHHHHHHHHH----
Confidence 467888774 58888888887633 3 48999990 0 135799999998763 222211
Q ss_pred CCceeEEEEcCCCc
Q 042171 64 EVNFDYAFMDADKD 77 (125)
Q Consensus 64 ~~~fD~v~id~~~~ 77 (125)
...+|.||.-++..
T Consensus 110 ~~~~D~Vih~Aa~~ 123 (399)
T 3nzo_A 110 DGQYDYVLNLSALK 123 (399)
T ss_dssp CCCCSEEEECCCCC
T ss_pred hCCCCEEEECCCcC
Confidence 35799999877643
No 427
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=50.91 E-value=14 Score=28.60 Aligned_cols=32 Identities=16% Similarity=0.147 Sum_probs=25.6
Q ss_pred CCEEEEEcCcccHHHHHHHhhCC------CCCEEEEEe
Q 042171 5 LKKTIEIGVFTGYSLFLTALTIP------EDGQITAID 36 (125)
Q Consensus 5 ~~~vLeiG~g~G~~t~~la~~~~------~~~~v~~iD 36 (125)
+-.|+|+|.|.|..+.-+.+++. ...+++.||
T Consensus 81 ~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE 118 (387)
T 1zkd_A 81 TLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVE 118 (387)
T ss_dssp SEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEEC
T ss_pred CcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEe
Confidence 34799999999999998887653 235889999
No 428
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=50.44 E-value=14 Score=22.14 Aligned_cols=63 Identities=16% Similarity=0.083 Sum_probs=39.8
Q ss_pred CCEEEEEcCcccHHHHHHHhhCCC-C-CEEEEEeCC------C-CCcEEEEecchHHH--HHHHhhcCCCCCceeEEEEc
Q 042171 5 LKKTIEIGVFTGYSLFLTALTIPE-D-GQITAIDAR------V-DHKINFIESEALSV--LDQLLKDSENEVNFDYAFMD 73 (125)
Q Consensus 5 ~~~vLeiG~g~G~~t~~la~~~~~-~-~~v~~iD~~------~-~~~i~~~~gd~~~~--l~~~~~~~~~~~~fD~v~id 73 (125)
..+|+-+|+ |..+..+++.+.. + .+|+.+|.. + ...+.++..|..+. +... -..+|+|+.-
T Consensus 5 ~~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~------~~~~d~vi~~ 76 (118)
T 3ic5_A 5 RWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKA------LGGFDAVISA 76 (118)
T ss_dssp CEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHH------TTTCSEEEEC
T ss_pred cCeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHH------HcCCCEEEEC
Confidence 458999998 7777777776532 3 578899810 1 23466677766542 2222 2468999976
Q ss_pred CC
Q 042171 74 AD 75 (125)
Q Consensus 74 ~~ 75 (125)
..
T Consensus 77 ~~ 78 (118)
T 3ic5_A 77 AP 78 (118)
T ss_dssp SC
T ss_pred CC
Confidence 54
No 429
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=49.97 E-value=19 Score=27.02 Aligned_cols=62 Identities=21% Similarity=0.213 Sum_probs=40.6
Q ss_pred CEEEEEcCcccHHHHHHHhhCCCCC-EEEEEe----------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEEEc
Q 042171 6 KKTIEIGVFTGYSLFLTALTIPEDG-QITAID----------ARVDHKINFIESEALSVLDQLLKDSENEVNFDYAFMD 73 (125)
Q Consensus 6 ~~vLeiG~g~G~~t~~la~~~~~~~-~v~~iD----------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~id 73 (125)
-+++|+-||.|-.++-+.++-- +. .+.++| ..+. ...++.+|..+..+.-.. ...+|+++..
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~-~~~~v~a~e~d~~a~~ty~~N~~-~~~~~~~DI~~~~~~~~~----~~~~D~l~gg 76 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGL-DGEIVAAVDINTVANSVYKHNFP-ETNLLNRNIQQLTPQVIK----KWNVDTILMS 76 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTC-SEEEEEEECCCHHHHHHHHHHCT-TSCEECCCGGGCCHHHHH----HTTCCEEEEC
T ss_pred CEEEEECcCccHHHHHHHHcCC-CceEEEEEeCCHHHHHHHHHhCC-CCceeccccccCCHHHhc----cCCCCEEEec
Confidence 4799999999999999887621 12 478999 2232 234677888765332111 1369999863
No 430
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=49.94 E-value=18 Score=28.42 Aligned_cols=36 Identities=19% Similarity=0.216 Sum_probs=24.4
Q ss_pred CCCCCCEEEEEcCcccHHHHHH--HhhCCCCCEEEEEe
Q 042171 1 MRLKLKKTIEIGVFTGYSLFLT--ALTIPEDGQITAID 36 (125)
Q Consensus 1 ~~~~~~~vLeiG~g~G~~t~~l--a~~~~~~~~v~~iD 36 (125)
|..+...|+-||.|+.-+++.+ ++..+.+.+|+-+|
T Consensus 1 M~~~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE 38 (538)
T 2aqj_A 1 MNKPIKNIVIVGGGTAGWMAASYLVRALQQQANITLIE 38 (538)
T ss_dssp -CCBCCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEE
T ss_pred CCCCCCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEEC
Confidence 5456678999999986555543 33332367999999
No 431
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=49.32 E-value=27 Score=25.36 Aligned_cols=28 Identities=11% Similarity=-0.077 Sum_probs=23.7
Q ss_pred EEEEEcC--cccHHHHHHHhhCCCCCEEEEEe
Q 042171 7 KTIEIGV--FTGYSLFLTALTIPEDGQITAID 36 (125)
Q Consensus 7 ~vLeiG~--g~G~~t~~la~~~~~~~~v~~iD 36 (125)
+||-+|+ +.|..++.+|++.+ .+|++++
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~G--a~vi~~~ 181 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRG--YTVEAST 181 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTT--CCEEEEE
T ss_pred eEEEecCCCHHHHHHHHHHHHCC--CEEEEEE
Confidence 7999996 77888999999874 6898888
No 432
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=48.86 E-value=56 Score=22.72 Aligned_cols=73 Identities=15% Similarity=0.129 Sum_probs=43.2
Q ss_pred CCCCEEEEEcCcccHHHHHHHhhC-CCCCEEEEEe-------------CCCCCcEEEEecchHHH--HHHHhhcC-CCCC
Q 042171 3 LKLKKTIEIGVFTGYSLFLTALTI-PEDGQITAID-------------ARVDHKINFIESEALSV--LDQLLKDS-ENEV 65 (125)
Q Consensus 3 ~~~~~vLeiG~g~G~~t~~la~~~-~~~~~v~~iD-------------~~~~~~i~~~~gd~~~~--l~~~~~~~-~~~~ 65 (125)
.+.+.+|-.|.+.| .+..+++.+ ..+.+|+.++ .....++.++..|..+. +..+...- ...+
T Consensus 4 l~~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 82 (257)
T 3imf_A 4 MKEKVVIITGGSSG-MGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFG 82 (257)
T ss_dssp TTTCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 45677888886544 455555544 3367899888 22345788888887642 11111100 0025
Q ss_pred ceeEEEEcCCC
Q 042171 66 NFDYAFMDADK 76 (125)
Q Consensus 66 ~fD~v~id~~~ 76 (125)
+.|.++..+..
T Consensus 83 ~id~lv~nAg~ 93 (257)
T 3imf_A 83 RIDILINNAAG 93 (257)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999988763
No 433
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=48.85 E-value=47 Score=23.84 Aligned_cols=72 Identities=15% Similarity=0.122 Sum_probs=46.3
Q ss_pred CCCCCCEEEEEcCcccHHHHHHHhhC-CCCCEEEEEe-------------CCCCCcEEEEecchHHH------HHHHhhc
Q 042171 1 MRLKLKKTIEIGVFTGYSLFLTALTI-PEDGQITAID-------------ARVDHKINFIESEALSV------LDQLLKD 60 (125)
Q Consensus 1 ~~~~~~~vLeiG~g~G~~t~~la~~~-~~~~~v~~iD-------------~~~~~~i~~~~gd~~~~------l~~~~~~ 60 (125)
|+.+.+.+|--|.+.|. +..+|+++ ..+++|+.+| .....++..+..|..+. .......
T Consensus 3 ~sL~gKvalVTGas~GI-G~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~ 81 (254)
T 4fn4_A 3 QSLKNKVVIVTGAGSGI-GRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFET 81 (254)
T ss_dssp GGGTTCEEEEETTTSHH-HHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHH-HHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 45678889999987775 44445444 3478999998 12345678888877642 1222111
Q ss_pred CCCCCceeEEEEcCCC
Q 042171 61 SENEVNFDYAFMDADK 76 (125)
Q Consensus 61 ~~~~~~fD~v~id~~~ 76 (125)
-++.|.++.++..
T Consensus 82 ---~G~iDiLVNNAGi 94 (254)
T 4fn4_A 82 ---YSRIDVLCNNAGI 94 (254)
T ss_dssp ---HSCCCEEEECCCC
T ss_pred ---cCCCCEEEECCcc
Confidence 2689999988763
No 434
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=48.69 E-value=46 Score=23.25 Aligned_cols=64 Identities=8% Similarity=0.078 Sum_probs=44.4
Q ss_pred CEEEEEcCcccHHHHHHHhhCCC-CCEEEEEe-C---CCCCcEEEEecchHHH--HHHHhhcCCCCCceeEEEEcCCC
Q 042171 6 KKTIEIGVFTGYSLFLTALTIPE-DGQITAID-A---RVDHKINFIESEALSV--LDQLLKDSENEVNFDYAFMDADK 76 (125)
Q Consensus 6 ~~vLeiG~g~G~~t~~la~~~~~-~~~v~~iD-~---~~~~~i~~~~gd~~~~--l~~~~~~~~~~~~fD~v~id~~~ 76 (125)
++||-.|+ +|..+..+++.+-. +.+|++++ . ....+++++.+|..+. +..+. ..+|.|+..++.
T Consensus 4 k~vlVTGa-sg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~Dl~d~~~~~~~~------~~~D~vi~~Ag~ 74 (267)
T 3rft_A 4 KRLLVTGA-AGQLGRVMRERLAPMAEILRLADLSPLDPAGPNEECVQCDLADANAVNAMV------AGCDGIVHLGGI 74 (267)
T ss_dssp EEEEEEST-TSHHHHHHHHHTGGGEEEEEEEESSCCCCCCTTEEEEECCTTCHHHHHHHH------TTCSEEEECCSC
T ss_pred CEEEEECC-CCHHHHHHHHHHHhcCCEEEEEecCCccccCCCCEEEEcCCCCHHHHHHHH------cCCCEEEECCCC
Confidence 46777775 57788888888753 45788888 1 1235799999998753 33332 468999988764
No 435
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=48.35 E-value=21 Score=26.53 Aligned_cols=31 Identities=19% Similarity=0.072 Sum_probs=24.7
Q ss_pred CCCEEEEEcCc-ccHHHHHHHhhCCCCCEEEEEe
Q 042171 4 KLKKTIEIGVF-TGYSLFLTALTIPEDGQITAID 36 (125)
Q Consensus 4 ~~~~vLeiG~g-~G~~t~~la~~~~~~~~v~~iD 36 (125)
...+||-+|+| .|..++.+|++. +.+|++++
T Consensus 179 ~g~~VlV~GaG~vG~~~~qlak~~--Ga~Vi~~~ 210 (360)
T 1piw_A 179 PGKKVGIVGLGGIGSMGTLISKAM--GAETYVIS 210 (360)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHH--TCEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEc
Confidence 34689999975 488888888886 46899998
No 436
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=48.19 E-value=57 Score=23.29 Aligned_cols=62 Identities=19% Similarity=0.170 Sum_probs=40.7
Q ss_pred EEEEEcCcccHHHHHHHhhCC-CCCEEEEEeC---C---CC-CcEEEEecchHHH--HHHHhhcCCCCCceeEEEEcCC
Q 042171 7 KTIEIGVFTGYSLFLTALTIP-EDGQITAIDA---R---VD-HKINFIESEALSV--LDQLLKDSENEVNFDYAFMDAD 75 (125)
Q Consensus 7 ~vLeiG~g~G~~t~~la~~~~-~~~~v~~iD~---~---~~-~~i~~~~gd~~~~--l~~~~~~~~~~~~fD~v~id~~ 75 (125)
+||-.|+ +|..+..+++.+- .+.+|++++. . +. .+++++.+|..+. +..+ -..+|.||.-++
T Consensus 15 ~ilVtGa-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~------~~~~d~vih~a~ 86 (342)
T 2x4g_A 15 KYAVLGA-TGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERA------LRGLDGVIFSAG 86 (342)
T ss_dssp EEEEEST-TSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGGGCCEEEECCTTCHHHHHHH------TTTCSEEEEC--
T ss_pred EEEEECC-CcHHHHHHHHHHHHCCCEEEEEecChHhhhhhccCCeEEEEecCCCHHHHHHH------HcCCCEEEECCc
Confidence 6888874 6888888877663 3568999981 1 11 2688999998653 3332 245899997665
No 437
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=48.07 E-value=55 Score=21.32 Aligned_cols=64 Identities=17% Similarity=0.185 Sum_probs=43.4
Q ss_pred CEEEEEcCcccHHHHHHHhhCC-CCCEEEEEe---CC---C-CCcEEEEecchHHH--HHHHhhcCCCCCceeEEEEcCC
Q 042171 6 KKTIEIGVFTGYSLFLTALTIP-EDGQITAID---AR---V-DHKINFIESEALSV--LDQLLKDSENEVNFDYAFMDAD 75 (125)
Q Consensus 6 ~~vLeiG~g~G~~t~~la~~~~-~~~~v~~iD---~~---~-~~~i~~~~gd~~~~--l~~~~~~~~~~~~fD~v~id~~ 75 (125)
++||-+|+ +|..+..+++.+- .+.+|++++ .. . ..+++++.+|..+. +.... ..+|.|+.-+.
T Consensus 4 ~~ilVtGa-tG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~------~~~d~vi~~a~ 76 (206)
T 1hdo_A 4 KKIAIFGA-TGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTV------AGQDAVIVLLG 76 (206)
T ss_dssp CEEEEEST-TSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHH------TTCSEEEECCC
T ss_pred CEEEEEcC-CcHHHHHHHHHHHHCCCeEEEEEeChhhcccccCCceEEEEecCCCHHHHHHHH------cCCCEEEECcc
Confidence 67888875 5778888777653 356899998 11 1 45789999988753 33321 35899998765
Q ss_pred C
Q 042171 76 K 76 (125)
Q Consensus 76 ~ 76 (125)
.
T Consensus 77 ~ 77 (206)
T 1hdo_A 77 T 77 (206)
T ss_dssp C
T ss_pred C
Confidence 4
No 438
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=47.91 E-value=32 Score=26.95 Aligned_cols=64 Identities=13% Similarity=0.104 Sum_probs=45.7
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe---------C-CCCCcEEEEecchHHHHHHHhhcCCCCCceeEEEEc
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID---------A-RVDHKINFIESEALSVLDQLLKDSENEVNFDYAFMD 73 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD---------~-~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~id 73 (125)
..++|+=+|. |-.+..+|+.+.+..+|.-|| + .+ ++..+++||+.+. ..|... .-...|.++.-
T Consensus 234 ~~~~v~I~Gg--G~ig~~lA~~L~~~~~v~iIE~d~~r~~~la~~l-~~~~Vi~GD~td~-~~L~ee--~i~~~D~~ia~ 307 (461)
T 4g65_A 234 PYRRIMIVGG--GNIGASLAKRLEQTYSVKLIERNLQRAEKLSEEL-ENTIVFCGDAADQ-ELLTEE--NIDQVDVFIAL 307 (461)
T ss_dssp CCCEEEEECC--SHHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHC-TTSEEEESCTTCH-HHHHHT--TGGGCSEEEEC
T ss_pred cccEEEEEcc--hHHHHHHHHHhhhcCceEEEecCHHHHHHHHHHC-CCceEEeccccch-hhHhhc--CchhhcEEEEc
Confidence 4568888876 778888899887778999999 2 24 5788999999874 112110 13678998863
No 439
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=47.90 E-value=73 Score=22.90 Aligned_cols=70 Identities=9% Similarity=0.023 Sum_probs=42.6
Q ss_pred CCCCEEEEEcCcccHHHHHHHhhC-CCCCEEEEEe-------------CCCC-CcEEEEecchHHH------HHHHhhcC
Q 042171 3 LKLKKTIEIGVFTGYSLFLTALTI-PEDGQITAID-------------ARVD-HKINFIESEALSV------LDQLLKDS 61 (125)
Q Consensus 3 ~~~~~vLeiG~g~G~~t~~la~~~-~~~~~v~~iD-------------~~~~-~~i~~~~gd~~~~------l~~~~~~~ 61 (125)
.+.+.+|-.|.+.| .+..+++.+ ..+.+|+.++ .... .++.++..|..+. +..+...
T Consensus 39 l~~k~vlVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~- 116 (293)
T 3rih_A 39 LSARSVLVTGGTKG-IGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDA- 116 (293)
T ss_dssp CTTCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred CCCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHH-
Confidence 35567888786544 455555554 3367899998 1111 4788888887653 1222111
Q ss_pred CCCCceeEEEEcCCC
Q 042171 62 ENEVNFDYAFMDADK 76 (125)
Q Consensus 62 ~~~~~fD~v~id~~~ 76 (125)
.+++|.++..+..
T Consensus 117 --~g~iD~lvnnAg~ 129 (293)
T 3rih_A 117 --FGALDVVCANAGI 129 (293)
T ss_dssp --HSCCCEEEECCCC
T ss_pred --cCCCCEEEECCCC
Confidence 2578999988764
No 440
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=47.64 E-value=45 Score=23.54 Aligned_cols=70 Identities=10% Similarity=0.053 Sum_probs=41.8
Q ss_pred CCCCEEEEEcCcccHHHHHHHhhC-CCCCEEEEEe---CCCCCcEEEEecchHHH------HHHHhhcCCCCCceeEEEE
Q 042171 3 LKLKKTIEIGVFTGYSLFLTALTI-PEDGQITAID---ARVDHKINFIESEALSV------LDQLLKDSENEVNFDYAFM 72 (125)
Q Consensus 3 ~~~~~vLeiG~g~G~~t~~la~~~-~~~~~v~~iD---~~~~~~i~~~~gd~~~~------l~~~~~~~~~~~~fD~v~i 72 (125)
.+.++||-.|++.| .+..+++.+ ..+.+|+.++ ......+..+..|..+. +..+... .+..|.++.
T Consensus 12 ~~~k~vlVTGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~---~g~iD~lv~ 87 (269)
T 3vtz_A 12 FTDKVAIVTGGSSG-IGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHFKIDVTNEEEVKEAVEKTTKK---YGRIDILVN 87 (269)
T ss_dssp TTTCEEEESSTTSH-HHHHHHHHHHHTTCEEEEEESCC--CTTSSEEEECCTTCHHHHHHHHHHHHHH---HSCCCEEEE
T ss_pred CCCCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEeCCchhccCceeEEEecCCCHHHHHHHHHHHHHH---cCCCCEEEE
Confidence 35678888887655 444555544 3367899998 22334667777776542 1111111 257999998
Q ss_pred cCCC
Q 042171 73 DADK 76 (125)
Q Consensus 73 d~~~ 76 (125)
.+..
T Consensus 88 nAg~ 91 (269)
T 3vtz_A 88 NAGI 91 (269)
T ss_dssp CCCC
T ss_pred CCCc
Confidence 8764
No 441
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=47.55 E-value=65 Score=22.75 Aligned_cols=70 Identities=13% Similarity=0.047 Sum_probs=42.9
Q ss_pred CCCCEEEEEcCcccHHHHHHHhhC-CCCCEEEEEe--------------CCCCCcEEEEecchHHH------HHHHhhcC
Q 042171 3 LKLKKTIEIGVFTGYSLFLTALTI-PEDGQITAID--------------ARVDHKINFIESEALSV------LDQLLKDS 61 (125)
Q Consensus 3 ~~~~~vLeiG~g~G~~t~~la~~~-~~~~~v~~iD--------------~~~~~~i~~~~gd~~~~------l~~~~~~~ 61 (125)
.+.+.+|-.|++.| .+..+++.+ ..+.+|+.++ .....++.++..|..+. +......
T Consensus 29 l~gk~~lVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~- 106 (271)
T 3v2g_A 29 LAGKTAFVTGGSRG-IGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEA- 106 (271)
T ss_dssp CTTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred CCCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH-
Confidence 45678899997655 444555544 3367888886 11235788888887642 1222111
Q ss_pred CCCCceeEEEEcCCC
Q 042171 62 ENEVNFDYAFMDADK 76 (125)
Q Consensus 62 ~~~~~fD~v~id~~~ 76 (125)
.++.|.++..+..
T Consensus 107 --~g~iD~lvnnAg~ 119 (271)
T 3v2g_A 107 --LGGLDILVNSAGI 119 (271)
T ss_dssp --HSCCCEEEECCCC
T ss_pred --cCCCcEEEECCCC
Confidence 2579999988764
No 442
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=47.47 E-value=46 Score=24.45 Aligned_cols=31 Identities=13% Similarity=-0.105 Sum_probs=24.5
Q ss_pred CCCEEEEEc--CcccHHHHHHHhhCCCCCEEEEEe
Q 042171 4 KLKKTIEIG--VFTGYSLFLTALTIPEDGQITAID 36 (125)
Q Consensus 4 ~~~~vLeiG--~g~G~~t~~la~~~~~~~~v~~iD 36 (125)
+..+||-+| .+.|..++.+|++.+ .+|++++
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~G--a~Vi~~~ 182 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYG--LRVITTA 182 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTT--CEEEEEC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcC--CEEEEEe
Confidence 456899984 456888888998874 6999998
No 443
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=47.11 E-value=60 Score=22.37 Aligned_cols=75 Identities=19% Similarity=0.126 Sum_probs=45.4
Q ss_pred CCCCCCEEEEEcCcccHHHHHHHhhCC-CCCE-EEEEeCCC-------------CCcEEEEecchHHH---HHHHhhcC-
Q 042171 1 MRLKLKKTIEIGVFTGYSLFLTALTIP-EDGQ-ITAIDARV-------------DHKINFIESEALSV---LDQLLKDS- 61 (125)
Q Consensus 1 ~~~~~~~vLeiG~g~G~~t~~la~~~~-~~~~-v~~iD~~~-------------~~~i~~~~gd~~~~---l~~~~~~~- 61 (125)
|..+.+++|-.|. +|..+..+++.+- .+.+ |+.++..- ..++.++..|..+. +..+....
T Consensus 1 m~l~~k~vlVtGa-s~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 79 (254)
T 1sby_A 1 MDLTNKNVIFVAA-LGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIF 79 (254)
T ss_dssp CCCTTCEEEEETT-TSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred CCCCCcEEEEECC-CChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHH
Confidence 6677788999986 5667777777663 2444 88887111 24688888887532 22211100
Q ss_pred CCCCceeEEEEcCCC
Q 042171 62 ENEVNFDYAFMDADK 76 (125)
Q Consensus 62 ~~~~~fD~v~id~~~ 76 (125)
...+.+|.++..+..
T Consensus 80 ~~~g~id~lv~~Ag~ 94 (254)
T 1sby_A 80 DQLKTVDILINGAGI 94 (254)
T ss_dssp HHHSCCCEEEECCCC
T ss_pred HhcCCCCEEEECCcc
Confidence 002479999988764
No 444
>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}
Probab=47.00 E-value=35 Score=26.46 Aligned_cols=66 Identities=15% Similarity=0.257 Sum_probs=44.7
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCC----CCEEEEEeCC----------------------------CCCcEEEEecchH
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPE----DGQITAIDAR----------------------------VDHKINFIESEAL 51 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~----~~~v~~iD~~----------------------------~~~~i~~~~gd~~ 51 (125)
+.++||-.| ++|+.+..+++.+-. +.+|++++-. ...+++++.+|..
T Consensus 72 ~~~~VLVTG-atG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 150 (478)
T 4dqv_A 72 ELRTVLLTG-ATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKS 150 (478)
T ss_dssp CCCEEEEEC-TTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTT
T ss_pred CCCEEEEEC-CCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeECC
Confidence 456888887 468888888776532 4699999811 1258999999985
Q ss_pred --------HHHHHHhhcCCCCCceeEEEEcCCC
Q 042171 52 --------SVLDQLLKDSENEVNFDYAFMDADK 76 (125)
Q Consensus 52 --------~~l~~~~~~~~~~~~fD~v~id~~~ 76 (125)
+.+..+. ...|.||--++.
T Consensus 151 ~~~~gld~~~~~~~~------~~~D~Vih~Aa~ 177 (478)
T 4dqv_A 151 EPDLGLDQPMWRRLA------ETVDLIVDSAAM 177 (478)
T ss_dssp SGGGGCCHHHHHHHH------HHCCEEEECCSS
T ss_pred CcccCCCHHHHHHHH------cCCCEEEECccc
Confidence 2233332 468999987665
No 445
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=46.80 E-value=36 Score=24.08 Aligned_cols=72 Identities=13% Similarity=-0.036 Sum_probs=40.7
Q ss_pred CCCCCCEEEEEcCcccHHHHHHHhhC-CCCCEEEEEe--------------CCCCCcEEEEecchHHH------HHHHhh
Q 042171 1 MRLKLKKTIEIGVFTGYSLFLTALTI-PEDGQITAID--------------ARVDHKINFIESEALSV------LDQLLK 59 (125)
Q Consensus 1 ~~~~~~~vLeiG~g~G~~t~~la~~~-~~~~~v~~iD--------------~~~~~~i~~~~gd~~~~------l~~~~~ 59 (125)
|+.+.+.+|-.|.+.|. +..+++.+ ..+.+|+.++ .....++.++..|..+. +.....
T Consensus 23 m~~~~k~~lVTGas~GI-G~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 101 (267)
T 3u5t_A 23 MMETNKVAIVTGASRGI-GAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEE 101 (267)
T ss_dssp ----CCEEEEESCSSHH-HHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cccCCCEEEEeCCCCHH-HHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 44566788988876554 44444443 2367888775 11234678888877642 122111
Q ss_pred cCCCCCceeEEEEcCCC
Q 042171 60 DSENEVNFDYAFMDADK 76 (125)
Q Consensus 60 ~~~~~~~fD~v~id~~~ 76 (125)
. .++.|.++..+..
T Consensus 102 ~---~g~iD~lvnnAG~ 115 (267)
T 3u5t_A 102 A---FGGVDVLVNNAGI 115 (267)
T ss_dssp H---HSCEEEEEECCCC
T ss_pred H---cCCCCEEEECCCC
Confidence 1 2579999988764
No 446
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=46.74 E-value=23 Score=26.54 Aligned_cols=66 Identities=15% Similarity=0.013 Sum_probs=40.6
Q ss_pred CCCCCCEEEEEcCcccHHHHHHHhhCCCCCE-E-EEEe----------CCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 1 MRLKLKKTIEIGVFTGYSLFLTALTIPEDGQ-I-TAID----------ARVDHKINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 1 ~~~~~~~vLeiG~g~G~~t~~la~~~~~~~~-v-~~iD----------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
|..++-+++|+-||.|-.++-+.++-- +.+ + .++| ..+.+. ++.+|..+..+.-.. ...+|
T Consensus 6 m~~~~~~vidLFaG~GG~~~G~~~aG~-~~~~v~~a~e~d~~a~~ty~~N~~~~--~~~~DI~~~~~~~i~----~~~~D 78 (327)
T 3qv2_A 6 MQQKQVNVIEFFSGIGGLRSSYERSSI-NINATFIPFDINEIANKIYSKNFKEE--VQVKNLDSISIKQIE----SLNCN 78 (327)
T ss_dssp --CCCEEEEEETCTTTHHHHHHHHSSC-CCCEEEEEECCCHHHHHHHHHHHCCC--CBCCCTTTCCHHHHH----HTCCC
T ss_pred ccCCCCEEEEECCChhHHHHHHHHcCC-CceEEEEEEECCHHHHHHHHHHCCCC--cccCChhhcCHHHhc----cCCCC
Confidence 344566899999999999999887610 134 5 6999 122222 566777665332110 13689
Q ss_pred EEEEc
Q 042171 69 YAFMD 73 (125)
Q Consensus 69 ~v~id 73 (125)
+++..
T Consensus 79 il~gg 83 (327)
T 3qv2_A 79 TWFMS 83 (327)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 99864
No 447
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=46.22 E-value=16 Score=26.26 Aligned_cols=35 Identities=9% Similarity=-0.048 Sum_probs=22.2
Q ss_pred CCCCCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe
Q 042171 1 MRLKLKKTIEIGVFTGYSLFLTALTIPEDGQITAID 36 (125)
Q Consensus 1 ~~~~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD 36 (125)
|+.+..+|+-||.|.+-.++....+-. +.+|+-+|
T Consensus 1 m~~~~~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie 35 (335)
T 2zbw_A 1 MAADHTDVLIVGAGPTGLFAGFYVGMR-GLSFRFVD 35 (335)
T ss_dssp --CCEEEEEEECCSHHHHHHHHHHHHT-TCCEEEEE
T ss_pred CCCCcCcEEEECCCHHHHHHHHHHHhC-CCCEEEEe
Confidence 555667899999987665544332222 56799998
No 448
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=46.17 E-value=69 Score=22.56 Aligned_cols=71 Identities=8% Similarity=0.015 Sum_probs=43.2
Q ss_pred CCCCCEEEEEcCcccHHHHHHHhhC-CCCCEEEEEe-------------CCC---CCcEEEEecchHHH------HHHHh
Q 042171 2 RLKLKKTIEIGVFTGYSLFLTALTI-PEDGQITAID-------------ARV---DHKINFIESEALSV------LDQLL 58 (125)
Q Consensus 2 ~~~~~~vLeiG~g~G~~t~~la~~~-~~~~~v~~iD-------------~~~---~~~i~~~~gd~~~~------l~~~~ 58 (125)
..+.+.+|-.|.+.| .+..+++.+ ..+.+|+.++ ... ..++.++..|..+. +....
T Consensus 8 ~l~~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 86 (281)
T 3svt_A 8 SFQDRTYLVTGGGSG-IGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVT 86 (281)
T ss_dssp CCTTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CcCCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence 345678898887554 444555544 3367899888 111 12788888887642 12211
Q ss_pred hcCCCCCceeEEEEcCCC
Q 042171 59 KDSENEVNFDYAFMDADK 76 (125)
Q Consensus 59 ~~~~~~~~fD~v~id~~~ 76 (125)
.. .+++|.++..+..
T Consensus 87 ~~---~g~id~lv~nAg~ 101 (281)
T 3svt_A 87 AW---HGRLHGVVHCAGG 101 (281)
T ss_dssp HH---HSCCCEEEECCCC
T ss_pred HH---cCCCCEEEECCCc
Confidence 11 2578999988764
No 449
>3t8y_A CHEB, chemotaxis response regulator protein-glutamate methylesterase; CHEA, hydrolase; 1.90A {Thermotoga maritima}
Probab=45.99 E-value=33 Score=21.86 Aligned_cols=60 Identities=12% Similarity=0.083 Sum_probs=26.0
Q ss_pred CcccHHHHHHHhhCCCCCEEEEEe-------------CCCCC-cEEEEecchHHHHHHHhhcCCCCCceeEEEEcCCCc
Q 042171 13 VFTGYSLFLTALTIPEDGQITAID-------------ARVDH-KINFIESEALSVLDQLLKDSENEVNFDYAFMDADKD 77 (125)
Q Consensus 13 ~g~G~~t~~la~~~~~~~~v~~iD-------------~~~~~-~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~id~~~~ 77 (125)
.|+++++....+-....-+|.-+| ..... .+.....+..+.+..+. ...+|+|++|....
T Consensus 9 ~~~~~~~~~~~~M~~~~~~ILivdd~~~~~~~l~~~L~~~~~~~~v~~~~~~~~al~~l~-----~~~~dlvilD~~l~ 82 (164)
T 3t8y_A 9 HHSSGLVPRGSHMTDRVIRVLVVDDSAFMRMVLKDIIDSQPDMKVVGFAKDGLEAVEKAI-----ELKPDVITMDIEMP 82 (164)
T ss_dssp ---------------CCEEEEEECSCHHHHHHHHHHHHTSTTEEEEEEESSHHHHHHHHH-----HHCCSEEEECSSCS
T ss_pred cccCCcccCccccccCccEEEEEcCCHHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHhc-----cCCCCEEEEeCCCC
Confidence 455666666555443346788888 11211 22224566666665553 35689999987643
No 450
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=45.98 E-value=74 Score=22.25 Aligned_cols=73 Identities=11% Similarity=-0.020 Sum_probs=43.7
Q ss_pred CCCCEEEEEcCcccHHHHHHHhhC-CCCCEEEEEeC-------------CCCCcEEEEecchHHH--HHHHhhcC-CCCC
Q 042171 3 LKLKKTIEIGVFTGYSLFLTALTI-PEDGQITAIDA-------------RVDHKINFIESEALSV--LDQLLKDS-ENEV 65 (125)
Q Consensus 3 ~~~~~vLeiG~g~G~~t~~la~~~-~~~~~v~~iD~-------------~~~~~i~~~~gd~~~~--l~~~~~~~-~~~~ 65 (125)
.+.++||-.|++ |..+..+++.+ ..+.+|+.++. ....++.++..|..+. +..+.... ...+
T Consensus 29 l~~k~vlITGas-ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 107 (272)
T 1yb1_A 29 VTGEIVLITGAG-HGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIG 107 (272)
T ss_dssp CTTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred cCCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence 455788888865 55666666655 33678998881 1134788888887642 11111100 0125
Q ss_pred ceeEEEEcCCC
Q 042171 66 NFDYAFMDADK 76 (125)
Q Consensus 66 ~fD~v~id~~~ 76 (125)
.+|.|+..+..
T Consensus 108 ~iD~li~~Ag~ 118 (272)
T 1yb1_A 108 DVSILVNNAGV 118 (272)
T ss_dssp CCSEEEECCCC
T ss_pred CCcEEEECCCc
Confidence 79999988764
No 451
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=45.60 E-value=49 Score=23.17 Aligned_cols=74 Identities=18% Similarity=0.138 Sum_probs=44.0
Q ss_pred CCCCEEEEEcC-cccHHHHHHHhhC-CCCCEEEEEe-----------CCCCCcEEEEecchHHH--HHHHhhcC-CCCC-
Q 042171 3 LKLKKTIEIGV-FTGYSLFLTALTI-PEDGQITAID-----------ARVDHKINFIESEALSV--LDQLLKDS-ENEV- 65 (125)
Q Consensus 3 ~~~~~vLeiG~-g~G~~t~~la~~~-~~~~~v~~iD-----------~~~~~~i~~~~gd~~~~--l~~~~~~~-~~~~- 65 (125)
.+.+.+|-.|. ++|..+..+++.+ ..+.+|+.++ ..+..++.++..|..+. +..+.... ...+
T Consensus 5 l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 84 (269)
T 2h7i_A 5 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGA 84 (269)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCT
T ss_pred cCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 35678999997 3666677777665 2367888888 12334577787776542 11111100 0013
Q ss_pred --ceeEEEEcCCC
Q 042171 66 --NFDYAFMDADK 76 (125)
Q Consensus 66 --~fD~v~id~~~ 76 (125)
.+|.++..+..
T Consensus 85 ~~~iD~lv~nAg~ 97 (269)
T 2h7i_A 85 GNKLDGVVHSIGF 97 (269)
T ss_dssp TCCEEEEEECCCC
T ss_pred CCCceEEEECCcc
Confidence 79999988764
No 452
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=45.36 E-value=38 Score=24.96 Aligned_cols=29 Identities=14% Similarity=0.052 Sum_probs=23.4
Q ss_pred CEEEEEcC--cccHHHHHHHhhCCCCC-EEEEEe
Q 042171 6 KKTIEIGV--FTGYSLFLTALTIPEDG-QITAID 36 (125)
Q Consensus 6 ~~vLeiG~--g~G~~t~~la~~~~~~~-~v~~iD 36 (125)
++||-.|+ |.|..++.+++.. +. +|++++
T Consensus 162 ~~vlI~GasggiG~~~~~~a~~~--Ga~~Vi~~~ 193 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIGHFL--GCSRVVGIC 193 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHT--TCSEEEEEE
T ss_pred cEEEEECCCcHHHHHHHHHHHHC--CCCeEEEEe
Confidence 78999996 6777788888876 45 899998
No 453
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=45.32 E-value=13 Score=25.55 Aligned_cols=68 Identities=7% Similarity=0.075 Sum_probs=43.6
Q ss_pred CCCCEEEEEcCcccHHHHHHHhhC-CCCCEEEEEeC---CC----CCcE-EEEecchHHHHHHHhhcCCCCCceeEEEEc
Q 042171 3 LKLKKTIEIGVFTGYSLFLTALTI-PEDGQITAIDA---RV----DHKI-NFIESEALSVLDQLLKDSENEVNFDYAFMD 73 (125)
Q Consensus 3 ~~~~~vLeiG~g~G~~t~~la~~~-~~~~~v~~iD~---~~----~~~i-~~~~gd~~~~l~~~~~~~~~~~~fD~v~id 73 (125)
.+.++||-.|+ +|..+..+++.+ ..+.+|++++. .. ..++ +++.+|..+.+... -..+|.|+..
T Consensus 19 l~~~~ilVtGa-tG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~~~~~~~------~~~~D~vi~~ 91 (236)
T 3e8x_A 19 FQGMRVLVVGA-NGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLEEDFSHA------FASIDAVVFA 91 (236)
T ss_dssp --CCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEECCTTSCCGGG------GTTCSEEEEC
T ss_pred cCCCeEEEECC-CChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEEcccHHHHHHH------HcCCCEEEEC
Confidence 35678888885 577777777765 33578999991 11 1357 89999986322221 2569999987
Q ss_pred CCCc
Q 042171 74 ADKD 77 (125)
Q Consensus 74 ~~~~ 77 (125)
+...
T Consensus 92 ag~~ 95 (236)
T 3e8x_A 92 AGSG 95 (236)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 7643
No 454
>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A
Probab=45.28 E-value=16 Score=28.59 Aligned_cols=71 Identities=18% Similarity=0.245 Sum_probs=44.5
Q ss_pred CCCCEEEEEcCcccHHHH-HHHhhCCCCCEEEEEe---CCC----------------------CCcEEEEecchHH----
Q 042171 3 LKLKKTIEIGVFTGYSLF-LTALTIPEDGQITAID---ARV----------------------DHKINFIESEALS---- 52 (125)
Q Consensus 3 ~~~~~vLeiG~g~G~~t~-~la~~~~~~~~v~~iD---~~~----------------------~~~i~~~~gd~~~---- 52 (125)
..|+++|-+|+.+|+... .++.+...++.++.+- .+. ..+...+.+|+.+
T Consensus 48 ~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i 127 (401)
T 4ggo_A 48 KAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIK 127 (401)
T ss_dssp CCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHH
Confidence 468999999999998753 2333333367777665 111 1245678888764
Q ss_pred --HHHHHhhcCCCCCceeEEEEcCCC
Q 042171 53 --VLDQLLKDSENEVNFDYAFMDADK 76 (125)
Q Consensus 53 --~l~~~~~~~~~~~~fD~v~id~~~ 76 (125)
.+..+.. .-+++|+++-..+.
T Consensus 128 ~~vi~~i~~---~~G~IDiLVhS~A~ 150 (401)
T 4ggo_A 128 AQVIEEAKK---KGIKFDLIVYSLAS 150 (401)
T ss_dssp HHHHHHHHH---TTCCEEEEEECCCC
T ss_pred HHHHHHHHH---hcCCCCEEEEeccc
Confidence 2233332 24789999987664
No 455
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=45.16 E-value=61 Score=23.04 Aligned_cols=70 Identities=14% Similarity=0.058 Sum_probs=42.1
Q ss_pred CCCEEEEEcCcccHHHHHHHhhC-CCCCEEEEEe----------CCCCCcEEEEecchHHH------HHHHhhcCCCCCc
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTI-PEDGQITAID----------ARVDHKINFIESEALSV------LDQLLKDSENEVN 66 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~-~~~~~v~~iD----------~~~~~~i~~~~gd~~~~------l~~~~~~~~~~~~ 66 (125)
+.+.+|-.|.+.| .+..+++.+ ..+.+|+.++ ..+..++.++..|..+. +...... .+.
T Consensus 28 ~gk~vlVTGas~g-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~---~g~ 103 (277)
T 3gvc_A 28 AGKVAIVTGAGAG-IGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAA---FGG 103 (277)
T ss_dssp TTCEEEETTTTST-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHH---HSS
T ss_pred CCCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHH---cCC
Confidence 4567888887655 344445443 3367999998 12234677888877642 1221111 257
Q ss_pred eeEEEEcCCCc
Q 042171 67 FDYAFMDADKD 77 (125)
Q Consensus 67 fD~v~id~~~~ 77 (125)
.|.++..+...
T Consensus 104 iD~lvnnAg~~ 114 (277)
T 3gvc_A 104 VDKLVANAGVV 114 (277)
T ss_dssp CCEEEECCCCC
T ss_pred CCEEEECCCCC
Confidence 99999887653
No 456
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=45.11 E-value=26 Score=24.42 Aligned_cols=71 Identities=11% Similarity=0.024 Sum_probs=42.6
Q ss_pred CCCCCEEEEEcCcccHHHHHHHhhC-CCCCEEEEEe----------CCCCCcEEEEecchHHH------HHHHhhcCCCC
Q 042171 2 RLKLKKTIEIGVFTGYSLFLTALTI-PEDGQITAID----------ARVDHKINFIESEALSV------LDQLLKDSENE 64 (125)
Q Consensus 2 ~~~~~~vLeiG~g~G~~t~~la~~~-~~~~~v~~iD----------~~~~~~i~~~~gd~~~~------l~~~~~~~~~~ 64 (125)
..+.+.+|-.|.+.| .+..+++.+ ..+.+|+.++ ..+..++.++..|..+. +...... .
T Consensus 6 ~l~gk~~lVTGas~g-IG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~---~ 81 (248)
T 3op4_A 6 NLEGKVALVTGASRG-IGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDE---F 81 (248)
T ss_dssp CCTTCEEEESSCSSH-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHH---H
T ss_pred CCCCCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHH---c
Confidence 345678888887654 445555544 3367899988 11234567777776542 1221111 2
Q ss_pred CceeEEEEcCCC
Q 042171 65 VNFDYAFMDADK 76 (125)
Q Consensus 65 ~~fD~v~id~~~ 76 (125)
++.|.++..+..
T Consensus 82 g~iD~lv~nAg~ 93 (248)
T 3op4_A 82 GGVDILVNNAGI 93 (248)
T ss_dssp CCCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 579999988764
No 457
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=44.80 E-value=22 Score=26.18 Aligned_cols=33 Identities=12% Similarity=-0.020 Sum_probs=25.2
Q ss_pred CCCEEEEEcCcc-cHHHHHHHhhCCCCCEEEEEe
Q 042171 4 KLKKTIEIGVFT-GYSLFLTALTIPEDGQITAID 36 (125)
Q Consensus 4 ~~~~vLeiG~g~-G~~t~~la~~~~~~~~v~~iD 36 (125)
...+||-+|+|. |..++.+|++.-++.+|++++
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~ 203 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGIS 203 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEe
Confidence 346899999864 788888998861146899998
No 458
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=44.59 E-value=21 Score=28.02 Aligned_cols=34 Identities=21% Similarity=0.074 Sum_probs=24.7
Q ss_pred CCCCEEEEEcCcccHHHHHHHhhC--C---------CCCEEEEEe
Q 042171 3 LKLKKTIEIGVFTGYSLFLTALTI--P---------EDGQITAID 36 (125)
Q Consensus 3 ~~~~~vLeiG~g~G~~t~~la~~~--~---------~~~~v~~iD 36 (125)
....+|+-||.|+.-+++.++.+- + .+.+|+-+|
T Consensus 5 ~~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE 49 (526)
T 2pyx_A 5 KPITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIE 49 (526)
T ss_dssp SCCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEE
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEe
Confidence 456789999999977766644432 0 267899999
No 459
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=44.58 E-value=25 Score=25.31 Aligned_cols=31 Identities=13% Similarity=0.007 Sum_probs=25.5
Q ss_pred CCCEEEEEcC--cccHHHHHHHhhCCCCCEEEEEe
Q 042171 4 KLKKTIEIGV--FTGYSLFLTALTIPEDGQITAID 36 (125)
Q Consensus 4 ~~~~vLeiG~--g~G~~t~~la~~~~~~~~v~~iD 36 (125)
..++||-+|+ +.|..++.++++.+ .+|++++
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~~~G--a~Vi~~~ 157 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVARAMG--LRVLAAA 157 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTT--CEEEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC--CEEEEEe
Confidence 3468999997 67888899998874 6999998
No 460
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=44.53 E-value=34 Score=24.54 Aligned_cols=63 Identities=10% Similarity=0.133 Sum_probs=41.8
Q ss_pred EEEEEcCcccHHHHHHHhhCCC--CCEEEEEeC---C-----CCCcEEEEecchHH---HHHHHhhcCCCCCceeEEEEc
Q 042171 7 KTIEIGVFTGYSLFLTALTIPE--DGQITAIDA---R-----VDHKINFIESEALS---VLDQLLKDSENEVNFDYAFMD 73 (125)
Q Consensus 7 ~vLeiG~g~G~~t~~la~~~~~--~~~v~~iD~---~-----~~~~i~~~~gd~~~---~l~~~~~~~~~~~~fD~v~id 73 (125)
+||-.| |+|+.+..+++.+-. +.+|++++. . -..+++++.+|..+ .+..+. ..+|.|+.-
T Consensus 2 ~vlVtG-atG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------~~~d~vih~ 74 (345)
T 2bll_A 2 RVLILG-VNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHV------KKCDVVLPL 74 (345)
T ss_dssp EEEEET-CSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHH------HHCSEEEEC
T ss_pred eEEEEC-CCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhhc------cCCCEEEEc
Confidence 577776 478888888877632 468999981 1 12478999999864 233321 358999875
Q ss_pred CCC
Q 042171 74 ADK 76 (125)
Q Consensus 74 ~~~ 76 (125)
++.
T Consensus 75 A~~ 77 (345)
T 2bll_A 75 VAI 77 (345)
T ss_dssp BCC
T ss_pred ccc
Confidence 543
No 461
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=44.48 E-value=34 Score=24.21 Aligned_cols=73 Identities=14% Similarity=0.087 Sum_probs=43.1
Q ss_pred CCCCEEEEEcCcccHHHHHHHhhC-CCCCEEEEEe----------CCCCCcEEEEecchHHH--HHHHhhcC-CCCCcee
Q 042171 3 LKLKKTIEIGVFTGYSLFLTALTI-PEDGQITAID----------ARVDHKINFIESEALSV--LDQLLKDS-ENEVNFD 68 (125)
Q Consensus 3 ~~~~~vLeiG~g~G~~t~~la~~~-~~~~~v~~iD----------~~~~~~i~~~~gd~~~~--l~~~~~~~-~~~~~fD 68 (125)
.+.+++|-.|++.| .+..+++.+ ..+.+|+.++ ..+..++.++..|..+. +..+...- ...+.+|
T Consensus 25 l~gk~vlVTGas~g-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 103 (266)
T 3grp_A 25 LTGRKALVTGATGG-IGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGID 103 (266)
T ss_dssp CTTCEEEESSTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCC
T ss_pred cCCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCC
Confidence 45678888886654 455555554 3367888888 12345788888887642 11111000 0025799
Q ss_pred EEEEcCCC
Q 042171 69 YAFMDADK 76 (125)
Q Consensus 69 ~v~id~~~ 76 (125)
.++..+..
T Consensus 104 ~lvnnAg~ 111 (266)
T 3grp_A 104 ILVNNAGI 111 (266)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99988764
No 462
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=44.37 E-value=50 Score=23.08 Aligned_cols=74 Identities=15% Similarity=0.166 Sum_probs=43.9
Q ss_pred CCCCEEEEEcCcccHHHHHHHhhC-CCCCEEEEEe----------CCCCCcEEEEecchHHH--HHHHhhcC-CCCCcee
Q 042171 3 LKLKKTIEIGVFTGYSLFLTALTI-PEDGQITAID----------ARVDHKINFIESEALSV--LDQLLKDS-ENEVNFD 68 (125)
Q Consensus 3 ~~~~~vLeiG~g~G~~t~~la~~~-~~~~~v~~iD----------~~~~~~i~~~~gd~~~~--l~~~~~~~-~~~~~fD 68 (125)
.+.+++|-.|.+.| .+..+++.+ ..+.+|+.++ ..+..++.++..|..+. +..+...- ...+++|
T Consensus 6 l~gk~~lVTGas~g-IG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 84 (255)
T 4eso_A 6 YQGKKAIVIGGTHG-MGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAID 84 (255)
T ss_dssp TTTCEEEEETCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred CCCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 35678898887655 445555554 3367899998 11235788888887642 11111000 0025799
Q ss_pred EEEEcCCCc
Q 042171 69 YAFMDADKD 77 (125)
Q Consensus 69 ~v~id~~~~ 77 (125)
.++..+...
T Consensus 85 ~lv~nAg~~ 93 (255)
T 4eso_A 85 LLHINAGVS 93 (255)
T ss_dssp EEEECCCCC
T ss_pred EEEECCCCC
Confidence 999887643
No 463
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=44.12 E-value=73 Score=21.67 Aligned_cols=73 Identities=16% Similarity=0.038 Sum_probs=43.4
Q ss_pred CCCCEEEEEcCcccHHHHHHHhhC-CCCCEEEEEeC-------------CCCCcEEEEecchHHH--HHHHhhcC-CCCC
Q 042171 3 LKLKKTIEIGVFTGYSLFLTALTI-PEDGQITAIDA-------------RVDHKINFIESEALSV--LDQLLKDS-ENEV 65 (125)
Q Consensus 3 ~~~~~vLeiG~g~G~~t~~la~~~-~~~~~v~~iD~-------------~~~~~i~~~~gd~~~~--l~~~~~~~-~~~~ 65 (125)
.+.++||-.|. +|..+..+++.+ ..+.+|+.++. ....++.++.+|..+. +..+.... ...+
T Consensus 9 ~~~~~vlVtGa-sggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 87 (255)
T 1fmc_A 9 LDGKCAIITGA-GAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLG 87 (255)
T ss_dssp CTTCEEEETTT-TSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECC-ccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 45577888775 566677777765 33578999881 1234688888886542 12211000 0014
Q ss_pred ceeEEEEcCCC
Q 042171 66 NFDYAFMDADK 76 (125)
Q Consensus 66 ~fD~v~id~~~ 76 (125)
++|.|+..+..
T Consensus 88 ~~d~vi~~Ag~ 98 (255)
T 1fmc_A 88 KVDILVNNAGG 98 (255)
T ss_dssp SCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999987764
No 464
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=44.00 E-value=49 Score=22.48 Aligned_cols=68 Identities=12% Similarity=0.053 Sum_probs=40.6
Q ss_pred CEEEEEcCcccHHHHHHHhhC-CCCCEEEEEe----------CCCCCcEEEEecchHHH--HHHHhhcCCCCCceeEEEE
Q 042171 6 KKTIEIGVFTGYSLFLTALTI-PEDGQITAID----------ARVDHKINFIESEALSV--LDQLLKDSENEVNFDYAFM 72 (125)
Q Consensus 6 ~~vLeiG~g~G~~t~~la~~~-~~~~~v~~iD----------~~~~~~i~~~~gd~~~~--l~~~~~~~~~~~~fD~v~i 72 (125)
+.||-.|++.| .+..+++.+ ..+.+|+.++ ..+..++.++..|..+. +..+.... ...+|.++.
T Consensus 2 k~vlVTGas~g-IG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--~~~~d~lv~ 78 (230)
T 3guy_A 2 SLIVITGASSG-LGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQL--DSIPSTVVH 78 (230)
T ss_dssp -CEEEESTTSH-HHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSC--SSCCSEEEE
T ss_pred CEEEEecCCch-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHH--hhcCCEEEE
Confidence 35777887644 445555544 3367899888 23445777888877642 22332221 244699998
Q ss_pred cCCC
Q 042171 73 DADK 76 (125)
Q Consensus 73 d~~~ 76 (125)
.+..
T Consensus 79 ~Ag~ 82 (230)
T 3guy_A 79 SAGS 82 (230)
T ss_dssp CCCC
T ss_pred eCCc
Confidence 7764
No 465
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=43.71 E-value=80 Score=22.61 Aligned_cols=69 Identities=13% Similarity=0.053 Sum_probs=44.9
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCC-CCCEEEEEe---CCCC------CcEEEEecchHHH--HHHHhhcCCCCCceeEEE
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIP-EDGQITAID---ARVD------HKINFIESEALSV--LDQLLKDSENEVNFDYAF 71 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~-~~~~v~~iD---~~~~------~~i~~~~gd~~~~--l~~~~~~~~~~~~fD~v~ 71 (125)
+.++||-.|+ +|..+..+++.+- .+.+|++++ .... .+++++.+|..+. +..+.. ...+|.|+
T Consensus 19 ~~~~vlVTGa-sG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~----~~~~D~vi 93 (330)
T 2pzm_A 19 SHMRILITGG-AGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFD----SFKPTHVV 93 (330)
T ss_dssp TCCEEEEETT-TSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHH----HHCCSEEE
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHh----hcCCCEEE
Confidence 4568888884 6777888777663 356899998 1111 4688999987653 233221 01689999
Q ss_pred EcCCCc
Q 042171 72 MDADKD 77 (125)
Q Consensus 72 id~~~~ 77 (125)
.-++..
T Consensus 94 h~A~~~ 99 (330)
T 2pzm_A 94 HSAAAY 99 (330)
T ss_dssp ECCCCC
T ss_pred ECCccC
Confidence 877643
No 466
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=43.60 E-value=25 Score=25.48 Aligned_cols=31 Identities=10% Similarity=0.009 Sum_probs=25.3
Q ss_pred CCCEEEEEcCc-ccHHHHHHHhhCCCCCEEEEEe
Q 042171 4 KLKKTIEIGVF-TGYSLFLTALTIPEDGQITAID 36 (125)
Q Consensus 4 ~~~~vLeiG~g-~G~~t~~la~~~~~~~~v~~iD 36 (125)
...+||-+|+| .|..++.+|++.+ .+|++++
T Consensus 142 ~g~~VlV~GaG~vG~~a~qlak~~G--a~Vi~~~ 173 (315)
T 3goh_A 142 KQREVLIVGFGAVNNLLTQMLNNAG--YVVDLVS 173 (315)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHT--CEEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEE
Confidence 35689999985 4888899999874 6999998
No 467
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=43.31 E-value=71 Score=21.91 Aligned_cols=70 Identities=11% Similarity=0.023 Sum_probs=43.3
Q ss_pred CCCCEEEEEcCcccHHHHHHHhhC-CCCCEEEEEeC-C-------------CCCcEEEEecchHHH------HHHHhhcC
Q 042171 3 LKLKKTIEIGVFTGYSLFLTALTI-PEDGQITAIDA-R-------------VDHKINFIESEALSV------LDQLLKDS 61 (125)
Q Consensus 3 ~~~~~vLeiG~g~G~~t~~la~~~-~~~~~v~~iD~-~-------------~~~~i~~~~gd~~~~------l~~~~~~~ 61 (125)
.+.++||-.|. +|..+..+++.+ ..+.+|+.++. . ...++.++.+|..+. +......
T Consensus 12 ~~~k~vlITGa-sggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~- 89 (265)
T 1h5q_A 12 FVNKTIIVTGG-NRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDAD- 89 (265)
T ss_dssp CTTEEEEEETT-TSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred cCCCEEEEECC-CchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHh-
Confidence 45567888886 456666666655 23568988881 1 134688888887542 1222111
Q ss_pred CCCCceeEEEEcCCC
Q 042171 62 ENEVNFDYAFMDADK 76 (125)
Q Consensus 62 ~~~~~fD~v~id~~~ 76 (125)
.+++|.++..+..
T Consensus 90 --~~~id~li~~Ag~ 102 (265)
T 1h5q_A 90 --LGPISGLIANAGV 102 (265)
T ss_dssp --SCSEEEEEECCCC
T ss_pred --cCCCCEEEECCCc
Confidence 3579999987764
No 468
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=43.23 E-value=80 Score=21.86 Aligned_cols=73 Identities=16% Similarity=0.113 Sum_probs=42.6
Q ss_pred CCCCEEEEEcCcccHHHHHHHhhC-CCCCEEEEEe----------CCCCCcEEEEecchHHH--HHHHhhcC-CCCCcee
Q 042171 3 LKLKKTIEIGVFTGYSLFLTALTI-PEDGQITAID----------ARVDHKINFIESEALSV--LDQLLKDS-ENEVNFD 68 (125)
Q Consensus 3 ~~~~~vLeiG~g~G~~t~~la~~~-~~~~~v~~iD----------~~~~~~i~~~~gd~~~~--l~~~~~~~-~~~~~fD 68 (125)
.+.+++|-.|.+ |..+..+++.+ ..+.+|+.++ ..+..++.++..|..+. +..+.... ...+.+|
T Consensus 10 l~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD 88 (263)
T 3ak4_A 10 LSGRKAIVTGGS-KGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFD 88 (263)
T ss_dssp CTTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCC
T ss_pred CCCCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCC
Confidence 355788888865 45555666654 3367899888 12333677888876532 11111000 0014799
Q ss_pred EEEEcCCC
Q 042171 69 YAFMDADK 76 (125)
Q Consensus 69 ~v~id~~~ 76 (125)
.++..+..
T Consensus 89 ~lv~~Ag~ 96 (263)
T 3ak4_A 89 LLCANAGV 96 (263)
T ss_dssp EEEECCCC
T ss_pred EEEECCCc
Confidence 99988764
No 469
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=43.19 E-value=86 Score=22.19 Aligned_cols=70 Identities=11% Similarity=0.025 Sum_probs=43.1
Q ss_pred CCCCEEEEEcCcccHHHHHHHhhC-CCCCEEEEEeC--------------C-CCCcEEEEecchHHH------HHHHhhc
Q 042171 3 LKLKKTIEIGVFTGYSLFLTALTI-PEDGQITAIDA--------------R-VDHKINFIESEALSV------LDQLLKD 60 (125)
Q Consensus 3 ~~~~~vLeiG~g~G~~t~~la~~~-~~~~~v~~iD~--------------~-~~~~i~~~~gd~~~~------l~~~~~~ 60 (125)
...+.+|-.|.+.| .+..+++.+ ..+.+|+.++. . ...++.++..|..+. +......
T Consensus 23 l~~k~~lVTGas~G-IG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 101 (281)
T 3v2h_A 23 MMTKTAVITGSTSG-IGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADR 101 (281)
T ss_dssp CTTCEEEEETCSSH-HHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 34578888887655 444555544 33678888871 1 145788888887642 1222111
Q ss_pred CCCCCceeEEEEcCCC
Q 042171 61 SENEVNFDYAFMDADK 76 (125)
Q Consensus 61 ~~~~~~fD~v~id~~~ 76 (125)
.+++|.++..+..
T Consensus 102 ---~g~iD~lv~nAg~ 114 (281)
T 3v2h_A 102 ---FGGADILVNNAGV 114 (281)
T ss_dssp ---TSSCSEEEECCCC
T ss_pred ---CCCCCEEEECCCC
Confidence 2579999988765
No 470
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=43.12 E-value=50 Score=23.33 Aligned_cols=72 Identities=11% Similarity=0.068 Sum_probs=43.0
Q ss_pred CCCCCEEEEEcCcccHHHHHHHhhC-CCCCEEEEEeC--------------CCCCcEEEEecchHHH------HHHHhhc
Q 042171 2 RLKLKKTIEIGVFTGYSLFLTALTI-PEDGQITAIDA--------------RVDHKINFIESEALSV------LDQLLKD 60 (125)
Q Consensus 2 ~~~~~~vLeiG~g~G~~t~~la~~~-~~~~~v~~iD~--------------~~~~~i~~~~gd~~~~------l~~~~~~ 60 (125)
..+.+.+|-.|.+.| .+..+++.+ ..+.+|+.++. ....++.++..|..+. +..+...
T Consensus 25 ~l~~k~vlVTGas~g-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~ 103 (269)
T 4dmm_A 25 PLTDRIALVTGASRG-IGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIER 103 (269)
T ss_dssp TTTTCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 345677888886544 455555544 33678887761 1234688888887642 1222111
Q ss_pred CCCCCceeEEEEcCCCc
Q 042171 61 SENEVNFDYAFMDADKD 77 (125)
Q Consensus 61 ~~~~~~fD~v~id~~~~ 77 (125)
.++.|.++..+...
T Consensus 104 ---~g~id~lv~nAg~~ 117 (269)
T 4dmm_A 104 ---WGRLDVLVNNAGIT 117 (269)
T ss_dssp ---HSCCCEEEECCCCC
T ss_pred ---cCCCCEEEECCCCC
Confidence 25799999887643
No 471
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=43.07 E-value=63 Score=23.18 Aligned_cols=73 Identities=12% Similarity=0.113 Sum_probs=43.3
Q ss_pred CCCCEEEEEcCcccHHHHHHHhhC-CCCCEEEEEe-------------CCCCCcEEEEecchHHH--HHHHhhcC-CCCC
Q 042171 3 LKLKKTIEIGVFTGYSLFLTALTI-PEDGQITAID-------------ARVDHKINFIESEALSV--LDQLLKDS-ENEV 65 (125)
Q Consensus 3 ~~~~~vLeiG~g~G~~t~~la~~~-~~~~~v~~iD-------------~~~~~~i~~~~gd~~~~--l~~~~~~~-~~~~ 65 (125)
.+.+.||-.|++.| .+..+++.+ ..+.+|+.++ .....++.++..|..+. +..+.... ...+
T Consensus 29 l~gk~vlVTGas~g-IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 107 (301)
T 3tjr_A 29 FDGRAAVVTGGASG-IGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLG 107 (301)
T ss_dssp STTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCC
Confidence 35578898888755 445555544 3367899988 11234688888887642 11111100 0024
Q ss_pred ceeEEEEcCCC
Q 042171 66 NFDYAFMDADK 76 (125)
Q Consensus 66 ~fD~v~id~~~ 76 (125)
.+|.++..+..
T Consensus 108 ~id~lvnnAg~ 118 (301)
T 3tjr_A 108 GVDVVFSNAGI 118 (301)
T ss_dssp SCSEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 79999988774
No 472
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=42.79 E-value=31 Score=23.98 Aligned_cols=71 Identities=10% Similarity=0.196 Sum_probs=41.5
Q ss_pred CCCEEEEEcCcccHHHHHHHhhC-CCCCEEEEEe--------------CCCCCcEEEEecchHHH--HHHHhhcC-CCCC
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTI-PEDGQITAID--------------ARVDHKINFIESEALSV--LDQLLKDS-ENEV 65 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~-~~~~~v~~iD--------------~~~~~~i~~~~gd~~~~--l~~~~~~~-~~~~ 65 (125)
..+++|-.|++.| .+..+++.+ ..+.+|+.++ .....++.++..|..+. +..+.... ...+
T Consensus 6 ~~k~vlVTGas~g-IG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 84 (264)
T 3i4f_A 6 FVRHALITAGTKG-LGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFG 84 (264)
T ss_dssp CCCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred ccCEEEEeCCCch-hHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 3567888886654 445555544 3367888886 11235788998887642 11111100 0024
Q ss_pred ceeEEEEcCC
Q 042171 66 NFDYAFMDAD 75 (125)
Q Consensus 66 ~fD~v~id~~ 75 (125)
+.|.++..+.
T Consensus 85 ~id~lv~~Ag 94 (264)
T 3i4f_A 85 KIDFLINNAG 94 (264)
T ss_dssp CCCEEECCCC
T ss_pred CCCEEEECCc
Confidence 7999998877
No 473
>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A
Probab=42.50 E-value=83 Score=21.83 Aligned_cols=33 Identities=27% Similarity=0.211 Sum_probs=19.5
Q ss_pred CCCEEEEEc---CcccHHHHH--HHhhCCCCCEEEEEe
Q 042171 4 KLKKTIEIG---VFTGYSLFL--TALTIPEDGQITAID 36 (125)
Q Consensus 4 ~~~~vLeiG---~g~G~~t~~--la~~~~~~~~v~~iD 36 (125)
+..+|+-|. .|.|-+|+. +|.++..+.+|..+|
T Consensus 25 ~~~~vI~v~s~kGGvGKTT~a~~LA~~la~g~~VlliD 62 (267)
T 3k9g_A 25 KKPKIITIASIKGGVGKSTSAIILATLLSKNNKVLLID 62 (267)
T ss_dssp -CCEEEEECCSSSSSCHHHHHHHHHHHHTTTSCEEEEE
T ss_pred CCCeEEEEEeCCCCchHHHHHHHHHHHHHCCCCEEEEE
Confidence 444566653 456666654 444444456899999
No 474
>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}
Probab=42.11 E-value=36 Score=26.46 Aligned_cols=67 Identities=18% Similarity=0.170 Sum_probs=46.3
Q ss_pred CCEEEEEcCcccHHHHHHHhhCCC-CCEEEEEe-CC------------------------CCCcEEEEecchHHHHHHHh
Q 042171 5 LKKTIEIGVFTGYSLFLTALTIPE-DGQITAID-AR------------------------VDHKINFIESEALSVLDQLL 58 (125)
Q Consensus 5 ~~~vLeiG~g~G~~t~~la~~~~~-~~~v~~iD-~~------------------------~~~~i~~~~gd~~~~l~~~~ 58 (125)
+++||-.| ++|+.+..+++.+.+ +.+|++++ .. ...+++++.+|..+. +.+.
T Consensus 150 ~~~VLVTG-atG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~-~~l~ 227 (508)
T 4f6l_B 150 LGNTLLTG-ATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECM-DDVV 227 (508)
T ss_dssp CEEEEESC-TTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBC-SSCC
T ss_pred CCeEEEEC-CccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCccc-ccCC
Confidence 35777766 579999999998853 45799998 11 136899999998763 1221
Q ss_pred hcCCCCCceeEEEEcCCCc
Q 042171 59 KDSENEVNFDYAFMDADKD 77 (125)
Q Consensus 59 ~~~~~~~~fD~v~id~~~~ 77 (125)
....+|.|+--++..
T Consensus 228 ----~~~~~D~Vih~Aa~~ 242 (508)
T 4f6l_B 228 ----LPENMDTIIHAGART 242 (508)
T ss_dssp ----CSSCCSEEEECCCC-
T ss_pred ----CccCCCEEEECCcee
Confidence 136799999776643
No 475
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=41.88 E-value=32 Score=23.95 Aligned_cols=73 Identities=16% Similarity=0.154 Sum_probs=43.1
Q ss_pred CCCCEEEEEcCcccHHHHHHHhhC-CCCCEEEEEe----------CCCCCcEEEEecchHHH--HHHHhhcC-CCCCcee
Q 042171 3 LKLKKTIEIGVFTGYSLFLTALTI-PEDGQITAID----------ARVDHKINFIESEALSV--LDQLLKDS-ENEVNFD 68 (125)
Q Consensus 3 ~~~~~vLeiG~g~G~~t~~la~~~-~~~~~v~~iD----------~~~~~~i~~~~gd~~~~--l~~~~~~~-~~~~~fD 68 (125)
.+.+.+|-.|.+.| .+..+++.+ ..+.+|+.++ ..+..++.++..|..+. +..+...- ...+++|
T Consensus 4 l~gk~vlVTGas~g-IG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 82 (247)
T 3rwb_A 4 LAGKTALVTGAAQG-IGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGID 82 (247)
T ss_dssp TTTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCS
T ss_pred cCCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCC
Confidence 45678898887655 444455544 3367899888 12245688888777542 11111100 0025799
Q ss_pred EEEEcCCC
Q 042171 69 YAFMDADK 76 (125)
Q Consensus 69 ~v~id~~~ 76 (125)
.++..+..
T Consensus 83 ~lv~nAg~ 90 (247)
T 3rwb_A 83 ILVNNASI 90 (247)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99988764
No 476
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=41.75 E-value=91 Score=24.66 Aligned_cols=68 Identities=13% Similarity=0.034 Sum_probs=39.6
Q ss_pred CCCEEEEEc-CcccHHHHH-HHhhCCCCCEEEEEeCCC-C--------CcEEEEecchHHHHHHHhhcCCCCCceeEEEE
Q 042171 4 KLKKTIEIG-VFTGYSLFL-TALTIPEDGQITAIDARV-D--------HKINFIESEALSVLDQLLKDSENEVNFDYAFM 72 (125)
Q Consensus 4 ~~~~vLeiG-~g~G~~t~~-la~~~~~~~~v~~iD~~~-~--------~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~i 72 (125)
+.++|.=|| +|+|.+++. +++.. +.+|++.|... . ..+++..|.-.+. + ...+|+|+.
T Consensus 18 ~~~~i~~iGiGg~Gms~lA~~l~~~--G~~V~~sD~~~~~~~~~~L~~~gi~~~~G~~~~~---~------~~~~d~vV~ 86 (524)
T 3hn7_A 18 QGMHIHILGICGTFMGSLALLARAL--GHTVTGSDANIYPPMSTQLEQAGVTIEEGYLIAH---L------QPAPDLVVV 86 (524)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCCCTTHHHHHHHTTCEEEESCCGGG---G------CSCCSEEEE
T ss_pred cCCEEEEEEecHhhHHHHHHHHHhC--CCEEEEECCCCCcHHHHHHHHCCCEEECCCCHHH---c------CCCCCEEEE
Confidence 567888888 577877543 33333 68999999321 1 1356666533221 1 245899998
Q ss_pred cCCC-cCCHHH
Q 042171 73 DADK-DNYCNY 82 (125)
Q Consensus 73 d~~~-~~~~~~ 82 (125)
.... ...|.+
T Consensus 87 Spgi~~~~p~l 97 (524)
T 3hn7_A 87 GNAMKRGMDVI 97 (524)
T ss_dssp CTTCCTTSHHH
T ss_pred CCCcCCCCHHH
Confidence 7554 444544
No 477
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=41.70 E-value=71 Score=22.13 Aligned_cols=71 Identities=7% Similarity=0.021 Sum_probs=40.9
Q ss_pred CCCCCEEEEEcCc--ccHHHHHHHhhC-CCCCEEEEEe-------------CCCC-CcEEEEecchHHH------HHHHh
Q 042171 2 RLKLKKTIEIGVF--TGYSLFLTALTI-PEDGQITAID-------------ARVD-HKINFIESEALSV------LDQLL 58 (125)
Q Consensus 2 ~~~~~~vLeiG~g--~G~~t~~la~~~-~~~~~v~~iD-------------~~~~-~~i~~~~gd~~~~------l~~~~ 58 (125)
..+.+++|-.|++ .|. +..+++.+ ..+.+|+.++ .... .++.++..|..+. +..+.
T Consensus 4 ~l~~k~vlVTGasg~~GI-G~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 82 (266)
T 3oig_A 4 SLEGRNIVVMGVANKRSI-AWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIK 82 (266)
T ss_dssp CCTTCEEEEECCCSTTSH-HHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHH
T ss_pred ccCCCEEEEEcCCCCCcH-HHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHH
Confidence 3567789999965 333 23333332 2367898887 1122 2688888877542 22221
Q ss_pred hcCCCCCceeEEEEcCCC
Q 042171 59 KDSENEVNFDYAFMDADK 76 (125)
Q Consensus 59 ~~~~~~~~fD~v~id~~~ 76 (125)
.. .+.+|.++..+..
T Consensus 83 ~~---~g~id~li~~Ag~ 97 (266)
T 3oig_A 83 EQ---VGVIHGIAHCIAF 97 (266)
T ss_dssp HH---HSCCCEEEECCCC
T ss_pred HH---hCCeeEEEEcccc
Confidence 11 2579999987764
No 478
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=41.40 E-value=53 Score=23.94 Aligned_cols=71 Identities=8% Similarity=0.056 Sum_probs=35.1
Q ss_pred CCCCCCEEEEEcCcccHHHHHHHhh---CCCCCEEEEE-e---C---CCCC--cEEEEecchHHHHHHHhhcCCCCCcee
Q 042171 1 MRLKLKKTIEIGVFTGYSLFLTALT---IPEDGQITAI-D---A---RVDH--KINFIESEALSVLDQLLKDSENEVNFD 68 (125)
Q Consensus 1 ~~~~~~~vLeiG~g~G~~t~~la~~---~~~~~~v~~i-D---~---~~~~--~i~~~~gd~~~~l~~~~~~~~~~~~fD 68 (125)
|+++..+|.=||||. .+..++++ .+ +.+++++ | . .+.. .+.-...+..+.+. +...|
T Consensus 1 M~m~~~rigiiG~G~--ig~~~~~~l~~~~-~~~~~av~d~~~~~~~~~a~~~~~~~~~~~~~~ll~--------~~~~D 69 (329)
T 3evn_A 1 MSLSKVRYGVVSTAK--VAPRFIEGVRLAG-NGEVVAVSSRTLESAQAFANKYHLPKAYDKLEDMLA--------DESID 69 (329)
T ss_dssp ----CEEEEEEBCCT--THHHHHHHHHHHC-SEEEEEEECSCSSTTCC---CCCCSCEESCHHHHHT--------CTTCC
T ss_pred CCCCceEEEEEechH--HHHHHHHHHHhCC-CcEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhc--------CCCCC
Confidence 566777999999973 33333333 33 5677766 4 1 1111 12113345555432 35799
Q ss_pred EEEEcCCCcCCHHH
Q 042171 69 YAFMDADKDNYCNY 82 (125)
Q Consensus 69 ~v~id~~~~~~~~~ 82 (125)
+|++-.......++
T Consensus 70 ~V~i~tp~~~h~~~ 83 (329)
T 3evn_A 70 VIYVATINQDHYKV 83 (329)
T ss_dssp EEEECSCGGGHHHH
T ss_pred EEEECCCcHHHHHH
Confidence 99986554433333
No 479
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=41.40 E-value=32 Score=22.07 Aligned_cols=67 Identities=18% Similarity=0.139 Sum_probs=39.8
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCC-CCCEEEEEe------CCC--CCcEEEEecchHHHHHHHhhcCCCCCceeEEEEcC
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIP-EDGQITAID------ARV--DHKINFIESEALSVLDQLLKDSENEVNFDYAFMDA 74 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~-~~~~v~~iD------~~~--~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~id~ 74 (125)
...+|+-+|+ |..+..+++.+. .+.+|+.+| ..+ ...+.++.++..+. ..+... .-..+|+|++-.
T Consensus 18 ~~~~v~IiG~--G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~-~~l~~~--~~~~ad~Vi~~~ 92 (155)
T 2g1u_A 18 KSKYIVIFGC--GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEF-ETLKEC--GMEKADMVFAFT 92 (155)
T ss_dssp CCCEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSH-HHHHTT--TGGGCSEEEECS
T ss_pred CCCcEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCH-HHHHHc--CcccCCEEEEEe
Confidence 3568999986 777777777653 246899999 112 12356677776432 112110 024689999754
Q ss_pred C
Q 042171 75 D 75 (125)
Q Consensus 75 ~ 75 (125)
.
T Consensus 93 ~ 93 (155)
T 2g1u_A 93 N 93 (155)
T ss_dssp S
T ss_pred C
Confidence 4
No 480
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=41.05 E-value=49 Score=24.03 Aligned_cols=55 Identities=11% Similarity=-0.077 Sum_probs=38.2
Q ss_pred EEEEEcCcccHHHHHHHhhCCCCCE-EEEEe----------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEEE
Q 042171 7 KTIEIGVFTGYSLFLTALTIPEDGQ-ITAID----------ARVDHKINFIESEALSVLDQLLKDSENEVNFDYAFM 72 (125)
Q Consensus 7 ~vLeiG~g~G~~t~~la~~~~~~~~-v~~iD----------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~i 72 (125)
+|||+=||.|-.++-+-++ +.+ +.++| .... -+++.+|..+.-+.- -..+|+++-
T Consensus 2 kvidLFsG~GG~~~G~~~a---G~~~v~a~e~d~~a~~ty~~N~~--~~~~~~DI~~i~~~~------~~~~D~l~g 67 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKA---GFRIICANEYDKSIWKTYESNHS--AKLIKGDISKISSDE------FPKCDGIIG 67 (331)
T ss_dssp EEEEESCTTCHHHHHHHHT---TCEEEEEEECCTTTHHHHHHHCC--SEEEESCGGGCCGGG------SCCCSEEEC
T ss_pred eEEEeCcCccHHHHHHHHC---CCEEEEEEeCCHHHHHHHHHHCC--CCcccCChhhCCHhh------CCcccEEEe
Confidence 6999999999999988775 444 57888 2232 356789987653221 246898874
No 481
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=40.82 E-value=44 Score=23.27 Aligned_cols=63 Identities=16% Similarity=0.075 Sum_probs=41.7
Q ss_pred EEEEEcCcccHHHHHHHhhCCC---CCEEEEEeC---CC----CCcEEEEecchHHH--HHHHhhcCCCCCceeEEEEcC
Q 042171 7 KTIEIGVFTGYSLFLTALTIPE---DGQITAIDA---RV----DHKINFIESEALSV--LDQLLKDSENEVNFDYAFMDA 74 (125)
Q Consensus 7 ~vLeiG~g~G~~t~~la~~~~~---~~~v~~iD~---~~----~~~i~~~~gd~~~~--l~~~~~~~~~~~~fD~v~id~ 74 (125)
+||-.| ++|..+..+++.+-+ +.+|++++. .. ..+++++.+|..+. +... -..+|.||.-+
T Consensus 2 ~ilVtG-atG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~d~~~l~~~------~~~~d~vi~~a 74 (287)
T 2jl1_A 2 SIAVTG-ATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQKA------FAGVSKLLFIS 74 (287)
T ss_dssp CEEETT-TTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTCEEEECCTTCHHHHHHH------TTTCSEEEECC
T ss_pred eEEEEc-CCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCCeEEEeccCCHHHHHHH------HhcCCEEEEcC
Confidence 466656 578888888887643 457999981 11 13678999988753 3332 24589999766
Q ss_pred CC
Q 042171 75 DK 76 (125)
Q Consensus 75 ~~ 76 (125)
..
T Consensus 75 ~~ 76 (287)
T 2jl1_A 75 GP 76 (287)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 482
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=40.58 E-value=53 Score=24.64 Aligned_cols=32 Identities=13% Similarity=0.207 Sum_probs=19.5
Q ss_pred CCCEEEEEcCc-ccHHHHHHHhhCCCCCEEEEEe
Q 042171 4 KLKKTIEIGVF-TGYSLFLTALTIPEDGQITAID 36 (125)
Q Consensus 4 ~~~~vLeiG~g-~G~~t~~la~~~~~~~~v~~iD 36 (125)
+..+||-+||| .|...+...-..+ =++++-+|
T Consensus 35 ~~~~VlivG~GGlG~~ia~~La~~G-vg~itlvD 67 (346)
T 1y8q_A 35 RASRVLLVGLKGLGAEIAKNLILAG-VKGLTMLD 67 (346)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEEC
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcC-CCEEEEEE
Confidence 45789999995 3433333222223 47899998
No 483
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=40.51 E-value=36 Score=23.94 Aligned_cols=71 Identities=10% Similarity=0.034 Sum_probs=43.3
Q ss_pred CCCCEEEEEcCcccHHHHHHHhhC-CCCCEEEEEeC----------C----CCCcEEEEecchHHH------HHHHhhcC
Q 042171 3 LKLKKTIEIGVFTGYSLFLTALTI-PEDGQITAIDA----------R----VDHKINFIESEALSV------LDQLLKDS 61 (125)
Q Consensus 3 ~~~~~vLeiG~g~G~~t~~la~~~-~~~~~v~~iD~----------~----~~~~i~~~~gd~~~~------l~~~~~~~ 61 (125)
.+.+.+|-.|.+.| .+..+++.+ ..+.+|+.++. . ...++.++..|..+. +..+...
T Consensus 18 l~~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~- 95 (266)
T 4egf_A 18 LDGKRALITGATKG-IGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEA- 95 (266)
T ss_dssp CTTCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHH-
T ss_pred CCCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH-
Confidence 45577888887655 444555544 33678998881 0 235788888887642 1222111
Q ss_pred CCCCceeEEEEcCCCc
Q 042171 62 ENEVNFDYAFMDADKD 77 (125)
Q Consensus 62 ~~~~~fD~v~id~~~~ 77 (125)
.+..|.++..+...
T Consensus 96 --~g~id~lv~nAg~~ 109 (266)
T 4egf_A 96 --FGGLDVLVNNAGIS 109 (266)
T ss_dssp --HTSCSEEEEECCCC
T ss_pred --cCCCCEEEECCCcC
Confidence 25799999887643
No 484
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=40.51 E-value=31 Score=24.49 Aligned_cols=70 Identities=16% Similarity=0.114 Sum_probs=42.7
Q ss_pred CCCCEEEEEcCcccHHHHHHHhhC-CCCCEEEEEe-------------CCCCCcEEEEecchHHH------HHHHhhcCC
Q 042171 3 LKLKKTIEIGVFTGYSLFLTALTI-PEDGQITAID-------------ARVDHKINFIESEALSV------LDQLLKDSE 62 (125)
Q Consensus 3 ~~~~~vLeiG~g~G~~t~~la~~~-~~~~~v~~iD-------------~~~~~~i~~~~gd~~~~------l~~~~~~~~ 62 (125)
.+.+.+|-.|.+.| .+..+++.+ ..+.+|+.++ .....++.++..|..+. +..+...
T Consensus 24 l~gk~~lVTGas~g-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-- 100 (271)
T 4ibo_A 24 LGGRTALVTGSSRG-LGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQ-- 100 (271)
T ss_dssp CTTCEEEETTCSSH-HHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHH--
T ss_pred CCCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH--
Confidence 45678888886544 455555554 3367888887 11234688888877642 1222111
Q ss_pred CCCceeEEEEcCCC
Q 042171 63 NEVNFDYAFMDADK 76 (125)
Q Consensus 63 ~~~~fD~v~id~~~ 76 (125)
.++.|.++..+..
T Consensus 101 -~g~iD~lv~nAg~ 113 (271)
T 4ibo_A 101 -GIDVDILVNNAGI 113 (271)
T ss_dssp -TCCCCEEEECCCC
T ss_pred -CCCCCEEEECCCC
Confidence 3579999988774
No 485
>3mag_A VP39; methylated adenine, methyltransferase, RNA CAP analog, poly (A) polymerase, mRNA processing, transcription; HET: SAH 3MA; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1bky_A* 1jsz_A* 1v39_A* 1p39_A* 1vp9_A* 2vp3_A* 1eam_A* 1jte_A* 1jtf_A* 4dcg_A* 3mct_A* 1b42_A* 1eqa_A* 1av6_A* 3er9_A* 2gaf_A 3er8_A 2ga9_A* 3erc_A*
Probab=40.12 E-value=81 Score=23.73 Aligned_cols=65 Identities=9% Similarity=-0.037 Sum_probs=44.4
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCC---CCCEEEEEe-CCC------CCcEEEEecch--HHHHHHHhhcCCCCCceeEEE
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIP---EDGQITAID-ARV------DHKINFIESEA--LSVLDQLLKDSENEVNFDYAF 71 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~---~~~~v~~iD-~~~------~~~i~~~~gd~--~~~l~~~~~~~~~~~~fD~v~ 71 (125)
.+..|+=||||.|.....+++..+ ...+-+.+| ++. ..+|+++..-. .+. ..+... ....+.+|
T Consensus 60 ~~~~VVYVGSApG~HL~~L~~~fp~~f~~ikWvLiDPap~~~~l~~~~NV~li~~fvde~dl-~~l~~~---~~~~~iLL 135 (307)
T 3mag_A 60 DGATVVYIGSAPGTHIRYLRDHFYNLGVIIKWMLIDGRHHDPILNGLRDVTLVTRFVDEEYL-RSIKKQ---LHPSKIIL 135 (307)
T ss_dssp TTCEEEEESCCSCHHHHHHHHHHHHTTCCCEEEEEESSCCCGGGTTCTTEEEEECCCCHHHH-HHHHHH---HTTSCEEE
T ss_pred CCcEEEEecccCccHHHHHHHhchhhCCCeEEEEEcCCcchhhhcCCCcEEEEeccCCHHHH-HHHHHh---ccCCCEEE
Confidence 356899999999999999999766 246899999 322 26788886633 222 222211 24688888
Q ss_pred E
Q 042171 72 M 72 (125)
Q Consensus 72 i 72 (125)
|
T Consensus 136 I 136 (307)
T 3mag_A 136 I 136 (307)
T ss_dssp E
T ss_pred E
Confidence 7
No 486
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=39.98 E-value=63 Score=22.72 Aligned_cols=71 Identities=15% Similarity=0.087 Sum_probs=42.5
Q ss_pred CCCCEEEEEcCcccHHHHHHHhhC-CCCCEEEEEeC----------CCCCcEEEEecchHHH------HHHHhhcCCCCC
Q 042171 3 LKLKKTIEIGVFTGYSLFLTALTI-PEDGQITAIDA----------RVDHKINFIESEALSV------LDQLLKDSENEV 65 (125)
Q Consensus 3 ~~~~~vLeiG~g~G~~t~~la~~~-~~~~~v~~iD~----------~~~~~i~~~~gd~~~~------l~~~~~~~~~~~ 65 (125)
.+.+.+|-.|.+.| .+..+++.+ ..+.+|+.++. .+..++.++..|..+. +...... .+
T Consensus 9 l~~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~---~g 84 (271)
T 3tzq_B 9 LENKVAIITGACGG-IGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDT---FG 84 (271)
T ss_dssp TTTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHH---HS
T ss_pred CCCCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHH---cC
Confidence 45678888887655 444455544 33678999981 1234677787776542 1211111 25
Q ss_pred ceeEEEEcCCCc
Q 042171 66 NFDYAFMDADKD 77 (125)
Q Consensus 66 ~fD~v~id~~~~ 77 (125)
.+|.++..+...
T Consensus 85 ~id~lv~nAg~~ 96 (271)
T 3tzq_B 85 RLDIVDNNAAHS 96 (271)
T ss_dssp CCCEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 799999887643
No 487
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=39.97 E-value=75 Score=22.45 Aligned_cols=73 Identities=10% Similarity=-0.076 Sum_probs=42.1
Q ss_pred CCCCEEEEEcCcccHHHHHHHhhC-CCCCEEEEEe-------------CCCCCcEEEEecchHHH--HHHHhhcC-CCCC
Q 042171 3 LKLKKTIEIGVFTGYSLFLTALTI-PEDGQITAID-------------ARVDHKINFIESEALSV--LDQLLKDS-ENEV 65 (125)
Q Consensus 3 ~~~~~vLeiG~g~G~~t~~la~~~-~~~~~v~~iD-------------~~~~~~i~~~~gd~~~~--l~~~~~~~-~~~~ 65 (125)
...+.+|-.|++.|. +..+++.+ ..+.+|+.++ .....++.++..|..+. +..+...- ...+
T Consensus 2 l~~k~~lVTGas~GI-G~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 80 (264)
T 3tfo_A 2 VMDKVILITGASGGI-GEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWG 80 (264)
T ss_dssp CTTCEEEESSTTSHH-HHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCccHH-HHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 345778888876554 44555544 3367899888 11235678888777542 11111100 0025
Q ss_pred ceeEEEEcCCC
Q 042171 66 NFDYAFMDADK 76 (125)
Q Consensus 66 ~fD~v~id~~~ 76 (125)
..|.++..+..
T Consensus 81 ~iD~lVnnAG~ 91 (264)
T 3tfo_A 81 RIDVLVNNAGV 91 (264)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999988764
No 488
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=39.93 E-value=88 Score=21.36 Aligned_cols=72 Identities=10% Similarity=-0.015 Sum_probs=41.6
Q ss_pred CCCEEEEEcCcccHHHHHHHhhC-CCCCEEEEEe---CCCCCcEEEEecchHHH--HHHHhhcC-CCC--CceeEEEEcC
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTI-PEDGQITAID---ARVDHKINFIESEALSV--LDQLLKDS-ENE--VNFDYAFMDA 74 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~-~~~~~v~~iD---~~~~~~i~~~~gd~~~~--l~~~~~~~-~~~--~~fD~v~id~ 74 (125)
+.+++|-.|.+. ..+..+++.+ ..+.+|+.++ ........++..|..+. +..+.... ... +++|.++..+
T Consensus 6 ~~k~vlVTGas~-gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~lv~~A 84 (241)
T 1dhr_A 6 EARRVLVYGGRG-ALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILCVA 84 (241)
T ss_dssp CCCEEEEETTTS-HHHHHHHHHHHTTTCEEEEEESSCCTTSSEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCCEEEEECCCc-HHHHHHHHHHHhCCCEEEEEeCChhhccCCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCCEEEEcc
Confidence 456788888654 4566666655 3467899998 23334566667775432 11111100 001 4799999887
Q ss_pred CC
Q 042171 75 DK 76 (125)
Q Consensus 75 ~~ 76 (125)
..
T Consensus 85 g~ 86 (241)
T 1dhr_A 85 GG 86 (241)
T ss_dssp CC
T ss_pred cc
Confidence 63
No 489
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=39.89 E-value=20 Score=27.39 Aligned_cols=33 Identities=12% Similarity=0.170 Sum_probs=20.3
Q ss_pred CCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTIPEDGQITAID 36 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD 36 (125)
++.||.-||||.|-.=+...+..+++.++++|=
T Consensus 6 ~~~rv~VvG~G~g~~h~~a~~~~~~~~elvav~ 38 (372)
T 4gmf_A 6 PKQRVLIVGAKFGEMYLNAFMQPPEGLELVGLL 38 (372)
T ss_dssp -CEEEEEECSTTTHHHHHTTSSCCTTEEEEEEE
T ss_pred CCCEEEEEehHHHHHHHHHHHhCCCCeEEEEEE
Confidence 456899999987654333233445456888764
No 490
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=39.82 E-value=58 Score=22.56 Aligned_cols=61 Identities=15% Similarity=0.074 Sum_probs=39.8
Q ss_pred EEEEcCcccHHHHHHHhhCCC---CCEEEEEeC---CC----CCcEEEEecchHHH--HHHHhhcCCCCCceeEEEEcCC
Q 042171 8 TIEIGVFTGYSLFLTALTIPE---DGQITAIDA---RV----DHKINFIESEALSV--LDQLLKDSENEVNFDYAFMDAD 75 (125)
Q Consensus 8 vLeiG~g~G~~t~~la~~~~~---~~~v~~iD~---~~----~~~i~~~~gd~~~~--l~~~~~~~~~~~~fD~v~id~~ 75 (125)
||-.| ++|..+..+++.+-+ +.+|++++. .. ..+++++.+|..+. +... -..+|.||.-+.
T Consensus 2 ilVtG-atG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~------~~~~d~vi~~a~ 74 (286)
T 2zcu_A 2 IAITG-ATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSA------LQGVEKLLLISS 74 (286)
T ss_dssp EEEES-TTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCEEEECCTTCHHHHHHH------TTTCSEEEECC-
T ss_pred EEEEc-CCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCeEEEcCCCCHHHHHHH------HhCCCEEEEeCC
Confidence 56666 578888888887643 467999981 11 13578899988653 3332 245899997655
No 491
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=39.76 E-value=32 Score=25.15 Aligned_cols=31 Identities=6% Similarity=-0.120 Sum_probs=25.1
Q ss_pred CCCEEEEEcC--cccHHHHHHHhhCCCCCEEEEEe
Q 042171 4 KLKKTIEIGV--FTGYSLFLTALTIPEDGQITAID 36 (125)
Q Consensus 4 ~~~~vLeiG~--g~G~~t~~la~~~~~~~~v~~iD 36 (125)
..++||-+|+ |.|..++.+++.. +.+|++++
T Consensus 155 ~g~~vlI~Ga~g~iG~~~~~~a~~~--G~~V~~~~ 187 (345)
T 2j3h_A 155 EGETVYVSAASGAVGQLVGQLAKMM--GCYVVGSA 187 (345)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEe
Confidence 3468999996 6788888888876 46899998
No 492
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=39.75 E-value=37 Score=25.78 Aligned_cols=30 Identities=30% Similarity=0.211 Sum_probs=21.3
Q ss_pred CEEEEEcCcccHHHHH--HHhhCCCCCEEEEEe
Q 042171 6 KKTIEIGVFTGYSLFL--TALTIPEDGQITAID 36 (125)
Q Consensus 6 ~~vLeiG~g~G~~t~~--la~~~~~~~~v~~iD 36 (125)
++|+-||.|.|-.+.. |++..+ +.+|+-||
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~-~~~VtlI~ 34 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMP-DLKITLIS 34 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCT-TCEEEEEC
T ss_pred CcEEEECCCHHHHHHHHHHhccCc-CCeEEEEc
Confidence 4799999987654443 444344 78999999
No 493
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=39.72 E-value=1e+02 Score=22.01 Aligned_cols=70 Identities=16% Similarity=-0.012 Sum_probs=42.5
Q ss_pred CCCCEEEEEcCcccHHHHHHHhhC-CCCCEEEEEeC-------------CCCCcEEEEecchHHH------HHHHhhcCC
Q 042171 3 LKLKKTIEIGVFTGYSLFLTALTI-PEDGQITAIDA-------------RVDHKINFIESEALSV------LDQLLKDSE 62 (125)
Q Consensus 3 ~~~~~vLeiG~g~G~~t~~la~~~-~~~~~v~~iD~-------------~~~~~i~~~~gd~~~~------l~~~~~~~~ 62 (125)
.+.+.+|-.|++ |..+..+++.+ ..+.+|+.++. ....++.++..|..+. +......
T Consensus 32 l~~k~vlVTGas-~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-- 108 (291)
T 3cxt_A 32 LKGKIALVTGAS-YGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGINAHGYVCDVTDEDGIQAMVAQIESE-- 108 (291)
T ss_dssp CTTCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH--
T ss_pred CCCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH--
Confidence 455788888865 55555666654 33678998881 1124677888886542 1222111
Q ss_pred CCCceeEEEEcCCC
Q 042171 63 NEVNFDYAFMDADK 76 (125)
Q Consensus 63 ~~~~fD~v~id~~~ 76 (125)
.+.+|.++..+..
T Consensus 109 -~g~iD~lvnnAg~ 121 (291)
T 3cxt_A 109 -VGIIDILVNNAGI 121 (291)
T ss_dssp -TCCCCEEEECCCC
T ss_pred -cCCCcEEEECCCc
Confidence 2569999988764
No 494
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=39.31 E-value=93 Score=21.48 Aligned_cols=69 Identities=9% Similarity=0.056 Sum_probs=40.5
Q ss_pred CCCEEEEEcCcccHHHHHHHhhC-CCCCEEEEEeCC--------------CCCcEEEEecch--H--H----HHHHHhhc
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTI-PEDGQITAIDAR--------------VDHKINFIESEA--L--S----VLDQLLKD 60 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~-~~~~~v~~iD~~--------------~~~~i~~~~gd~--~--~----~l~~~~~~ 60 (125)
+.+.+|-.|.+.| .+..+++.+ ..+.+|+.++.. ...++.++..|. . + .+..+...
T Consensus 11 ~~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (252)
T 3f1l_A 11 NDRIILVTGASDG-IGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVN 89 (252)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCh-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHh
Confidence 4567888886544 455555554 336789998810 112567777776 2 1 12222211
Q ss_pred CCCCCceeEEEEcCCC
Q 042171 61 SENEVNFDYAFMDADK 76 (125)
Q Consensus 61 ~~~~~~fD~v~id~~~ 76 (125)
.+++|.++..+..
T Consensus 90 ---~g~id~lv~nAg~ 102 (252)
T 3f1l_A 90 ---YPRLDGVLHNAGL 102 (252)
T ss_dssp ---CSCCSEEEECCCC
T ss_pred ---CCCCCEEEECCcc
Confidence 3579999988764
No 495
>1ej6_A Lambda2; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_U
Probab=39.11 E-value=30 Score=30.80 Aligned_cols=61 Identities=18% Similarity=0.184 Sum_probs=43.2
Q ss_pred CCCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe--------CCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEEE
Q 042171 3 LKLKKTIEIGVFTGYSLFLTALTIPEDGQITAID--------ARVDHKINFIESEALSVLDQLLKDSENEVNFDYAFM 72 (125)
Q Consensus 3 ~~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD--------~~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~i 72 (125)
...+++||+|||.-+ .+...+|++..|+.+| ..+..+-+++++|-+.. .+- ...++|.|.+
T Consensus 820 ~~~~~~lDlGTGPE~---RiLsLiP~~~pvtm~D~RP~ae~~~~w~~~T~f~~~DyL~~--~~~----~~~~~D~vt~ 888 (1289)
T 1ej6_A 820 YDGDVVLDLGTGPEA---KILELIPATSPVTCVDIRPTAQPSGCWNVRTTFLELDYLSD--GWI----TGVRGDIVTC 888 (1289)
T ss_dssp CTTCCEEEESCCSSC---GGGGTSCTTSCEEEEESSCCCSCSTTBSSCEEEEESCTTSS--SCG----GGCCCSEEEE
T ss_pred cccceEEEccCCCcc---eeeeecCCCCceEEecccCchhhhccccccceeeEcccccc--cee----ecCCCcEEEE
Confidence 457899999999875 3455678889999999 23445688999987642 111 0367888876
No 496
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=39.07 E-value=43 Score=22.34 Aligned_cols=63 Identities=14% Similarity=0.088 Sum_probs=43.0
Q ss_pred EEEEEcCcccHHHHHHHhhC-CCCCEEEEEeC-------CCCCcEEEEecchHHHHHHHhhcCCCCCceeEEEEcCCC
Q 042171 7 KTIEIGVFTGYSLFLTALTI-PEDGQITAIDA-------RVDHKINFIESEALSVLDQLLKDSENEVNFDYAFMDADK 76 (125)
Q Consensus 7 ~vLeiG~g~G~~t~~la~~~-~~~~~v~~iD~-------~~~~~i~~~~gd~~~~l~~~~~~~~~~~~fD~v~id~~~ 76 (125)
+||-.|+ +|..+..+++.+ ..+.+|++++- -...+++++.+|..+.-... -..+|.|+.-+..
T Consensus 2 kilVtGa-tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~~~------~~~~d~vi~~ag~ 72 (224)
T 3h2s_A 2 KIAVLGA-TGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTEAD------LDSVDAVVDALSV 72 (224)
T ss_dssp EEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCHHH------HTTCSEEEECCCC
T ss_pred EEEEEcC-CCHHHHHHHHHHHHCCCEEEEEEecccccccccCCCceEEecccccccHhh------cccCCEEEECCcc
Confidence 4777774 677777777765 33578999981 12357899999987642221 2568999987755
No 497
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=38.87 E-value=27 Score=26.01 Aligned_cols=35 Identities=9% Similarity=0.096 Sum_probs=23.1
Q ss_pred CCCCCCEEEEEcCcccHHHHHHHhhCCCCCEEEEEe
Q 042171 1 MRLKLKKTIEIGVFTGYSLFLTALTIPEDGQITAID 36 (125)
Q Consensus 1 ~~~~~~~vLeiG~g~G~~t~~la~~~~~~~~v~~iD 36 (125)
|......|+-||.|.+-+++.+..+-. +.+|+-+|
T Consensus 1 M~~~~~dVvIIGgG~aGl~~A~~La~~-G~~V~v~E 35 (421)
T 3nix_A 1 MQREKVDVLVIGAGPAGTVAASLVNKS-GFKVKIVE 35 (421)
T ss_dssp ---CEEEEEEECCSHHHHHHHHHHHTT-TCCEEEEC
T ss_pred CCCccCcEEEECCCHHHHHHHHHHHhC-CCCEEEEe
Confidence 444446899999987766666544432 56899999
No 498
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=38.81 E-value=98 Score=21.60 Aligned_cols=72 Identities=8% Similarity=0.015 Sum_probs=42.1
Q ss_pred CCCEEEEEcCcccHHHHHHHhhC-CCCCEEEEEe---------------CCCCCcEEEEecchHHH--HHHHhhcC-CCC
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTI-PEDGQITAID---------------ARVDHKINFIESEALSV--LDQLLKDS-ENE 64 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~-~~~~~v~~iD---------------~~~~~~i~~~~gd~~~~--l~~~~~~~-~~~ 64 (125)
+.+.+|-.|+. |..+..+++.+ ..+.+|+.++ .+...++.++.+|..+. +..+.... ...
T Consensus 31 ~~k~vlVTGas-ggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 109 (279)
T 1xg5_A 31 RDRLALVTGAS-GGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH 109 (279)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhC
Confidence 45678888864 55556666654 3367899888 12335688888887542 11111000 001
Q ss_pred CceeEEEEcCCC
Q 042171 65 VNFDYAFMDADK 76 (125)
Q Consensus 65 ~~fD~v~id~~~ 76 (125)
+.+|.|+..+..
T Consensus 110 g~iD~vi~~Ag~ 121 (279)
T 1xg5_A 110 SGVDICINNAGL 121 (279)
T ss_dssp CCCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 479999987763
No 499
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=38.76 E-value=97 Score=21.55 Aligned_cols=69 Identities=12% Similarity=0.031 Sum_probs=42.5
Q ss_pred CCCEEEEEcCcccHHHHHHHhhC-CCCCEEEEEe-------------CCCCCcEEEEecchHHH------HHHHhhcCCC
Q 042171 4 KLKKTIEIGVFTGYSLFLTALTI-PEDGQITAID-------------ARVDHKINFIESEALSV------LDQLLKDSEN 63 (125)
Q Consensus 4 ~~~~vLeiG~g~G~~t~~la~~~-~~~~~v~~iD-------------~~~~~~i~~~~gd~~~~------l~~~~~~~~~ 63 (125)
+.+.+|-.|++.|. +..+++.+ ..+.+|+.++ .....++.++..|..+. +..+...
T Consensus 10 ~~k~vlVTGas~gI-G~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~--- 85 (264)
T 3ucx_A 10 TDKVVVISGVGPAL-GTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKA--- 85 (264)
T ss_dssp TTCEEEEESCCTTH-HHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH---
T ss_pred CCcEEEEECCCcHH-HHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH---
Confidence 56788988876654 44444443 3367899888 11235788888887642 2222111
Q ss_pred CCceeEEEEcCCC
Q 042171 64 EVNFDYAFMDADK 76 (125)
Q Consensus 64 ~~~fD~v~id~~~ 76 (125)
.++.|.++..+..
T Consensus 86 ~g~id~lv~nAg~ 98 (264)
T 3ucx_A 86 YGRVDVVINNAFR 98 (264)
T ss_dssp TSCCSEEEECCCS
T ss_pred cCCCcEEEECCCC
Confidence 3579999988743
No 500
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=38.45 E-value=45 Score=24.63 Aligned_cols=30 Identities=7% Similarity=-0.057 Sum_probs=22.9
Q ss_pred CCEEEEEcCc-ccHHH-HHHH-hhCCCCCE-EEEEe
Q 042171 5 LKKTIEIGVF-TGYSL-FLTA-LTIPEDGQ-ITAID 36 (125)
Q Consensus 5 ~~~vLeiG~g-~G~~t-~~la-~~~~~~~~-v~~iD 36 (125)
+.+||-+|+| .|..+ +.+| ++.+ .+ |++++
T Consensus 173 ~~~VlV~GaG~vG~~a~iqla~k~~G--a~~Vi~~~ 206 (357)
T 2b5w_A 173 PSSAFVLGNGSLGLLTLAMLKVDDKG--YENLYCLG 206 (357)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHCTTC--CCEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHHHcC--CcEEEEEe
Confidence 4899999974 37777 8888 7664 55 99999
Done!