Query         042173
Match_columns 147
No_of_seqs    169 out of 1075
Neff          8.1 
Searched_HMMs 29240
Date          Mon Mar 25 05:35:01 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042173.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042173hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 1aqu_A EST, estrogen sulfotran 100.0 6.3E-38 2.2E-42  245.3   8.4  133    1-138   105-246 (297)
  2 3mgb_A TEG12; sulfotransferase 100.0 1.1E-37 3.6E-42  245.6   4.8  130    1-136    96-252 (319)
  3 2zpt_X Tyrosine-ester sulfotra 100.0 6.5E-37 2.2E-41  239.1   9.2  132    1-137   103-243 (295)
  4 2reo_A Putative sulfotransfera 100.0 1.1E-36 3.8E-41  238.9   8.3  132    1-137   113-253 (305)
  5 3bfx_A Sulfotransferase 1C2; P 100.0 1.5E-36   5E-41  237.2   8.2  131    1-136   104-243 (296)
  6 3ckl_A Sulfotransferase family 100.0 1.8E-36 6.3E-41  236.9   8.8  132    1-137   106-246 (298)
  7 1fmj_A Retinol dehydratase; su 100.0 2.8E-36 9.6E-41  241.1   9.9  128    1-134   159-295 (351)
  8 2gwh_A Sulfotransferase 1C2; s 100.0 1.7E-36 5.7E-41  237.1   8.2  132    1-137   106-246 (298)
  9 1q20_A SULT2B1B, sulfotransfer 100.0 6.1E-36 2.1E-40  233.9  11.4  133    1-138   107-248 (299)
 10 1q44_A RARO47, steroid sulfotr 100.0 4.4E-37 1.5E-41  243.4   4.9  132    1-136   135-278 (326)
 11 1ls6_A ARYL sulfotransferase;  100.0 2.9E-36 9.8E-41  235.3   9.2  133    1-138   103-244 (295)
 12 1j99_A Alcohol sulfotransferas 100.0 1.2E-35   4E-40  231.6   9.5  131    1-136   102-241 (293)
 13 1q1q_A SULT2B1A, sulfotransfer 100.0 1.1E-34 3.6E-39  231.8  10.3  131    1-136   105-244 (350)
 14 2ov8_A STAL; sulfotransferase, 100.0 1.3E-34 4.5E-39  225.7   6.1  122    1-132    80-225 (288)
 15 1zd1_A Sulfotransferase 4A1; S 100.0 8.6E-34 2.9E-38  220.3   6.6  132    1-138   106-251 (284)
 16 3rnl_A Sulfotransferase; struc  99.8 1.9E-19 6.6E-24  141.5   5.6   86   18-104   107-210 (311)
 17 1t8t_A Heparan sulfate D-gluco  99.7   6E-20 2.1E-24  140.6  -0.8   88   19-107    99-202 (271)
 18 3uan_A Heparan sulfate glucosa  99.7 2.2E-19 7.5E-24  138.7   2.3   87   18-106    99-203 (269)
 19 3bd9_A Heparan sulfate glucosa  99.7 2.7E-18 9.4E-23  132.4   3.3   89   19-107   108-214 (280)
 20 2zq5_A Putative uncharacterize  99.7 6.7E-18 2.3E-22  135.8   4.6  101   19-127   247-357 (384)
 21 1nst_A NST1, heparan sulfate N  99.7 4.7E-18 1.6E-22  133.7   0.9   87   19-105   138-244 (325)
 22 3ap1_A Protein-tyrosine sulfot  99.6 1.9E-16 6.3E-21  125.4   5.5   83   19-108   152-242 (337)
 23 2z6v_A Putative uncharacterize  99.6 8.6E-17   3E-21  130.5   3.5   93   19-119   264-368 (414)
 24 4gbm_A CURM sulfotransferase;   99.6 2.4E-16 8.3E-21  122.9   3.7   83   19-108   155-247 (323)
 25 4gox_A Polyketide synthase; ol  99.6 2.9E-16 9.8E-21  121.8   3.9   83   19-108   147-239 (313)
 26 1tex_A STF0 sulfotransferase;   99.1 6.6E-11 2.3E-15   91.8   4.8   85   19-107   153-256 (287)
 27 3f5f_A Maltose-binding peripla  95.7   0.011 3.9E-07   49.9   5.1   39   20-58    458-506 (658)
 28 2dbf_A Nuclear factor NF-kappa  36.4      56  0.0019   20.7   4.2   42   83-129     7-48  (100)
 29 3t76_A VANU, transcriptional r  35.7      31  0.0011   21.0   2.9   27   80-106    55-81  (88)
 30 2lv7_A Calcium-binding protein  34.8      40  0.0014   20.7   3.4   27   90-121    55-81  (100)
 31 1taf_B TFIID TBP associated fa  33.0      33  0.0011   20.4   2.5   23   86-108     5-28  (70)
 32 3i5g_C Myosin catalytic light   32.7      40  0.0014   22.4   3.3   27   90-121   104-130 (159)
 33 3omt_A Uncharacterized protein  32.4      40  0.0014   19.0   2.9   28   79-106    38-66  (73)
 34 2ewt_A BLDD, putative DNA-bind  32.1      32  0.0011   19.1   2.4   28   79-106    40-68  (71)
 35 2keb_A DNA polymerase subunit   30.7      49  0.0017   21.2   3.1   33   90-127    28-60  (101)
 36 2jx3_A Protein DEK; alpha heli  26.5      34  0.0011   22.9   2.0   33   85-119    72-104 (131)
 37 3b7h_A Prophage LP1 protein 11  26.5      30   0.001   19.6   1.6   27   79-105    37-65  (78)
 38 3qwg_A ESX-1 secretion-associa  26.0      32  0.0011   22.4   1.8   26   80-105    47-74  (123)
 39 3r1f_A ESX-1 secretion-associa  25.5      34  0.0012   22.6   1.9   26   80-105    49-76  (135)
 40 1y7y_A C.AHDI; helix-turn-heli  25.3      61  0.0021   17.9   2.8   29   78-106    42-71  (74)
 41 3i5g_B Myosin regulatory light  25.3      41  0.0014   22.2   2.3   27   90-121   104-130 (153)
 42 2xi8_A Putative transcription   25.1      32  0.0011   18.6   1.4   26   80-105    32-58  (66)
 43 4e2i_2 DNA polymerase alpha su  25.0      53  0.0018   20.0   2.5   28   91-123     6-33  (78)
 44 3kz3_A Repressor protein CI; f  24.9      63  0.0022   18.5   2.9   29   78-106    41-70  (80)
 45 3bs3_A Putative DNA-binding pr  24.5      66  0.0023   17.9   2.9   28   79-106    40-68  (76)
 46 1zug_A Phage 434 CRO protein;   23.7      18  0.0006   20.2   0.1   27   79-105    33-59  (71)
 47 1tiz_A Calmodulin-related prot  23.2      86  0.0029   16.5   3.1   26   90-120    20-45  (67)
 48 2jvl_A TRMBF1; coactivator, he  22.7      62  0.0021   20.1   2.6   30   78-107    65-95  (107)
 49 1nro_R Receptor based peptide   22.7      21  0.0007   16.7   0.2   13   25-37      6-18  (27)
 50 2k5c_A Uncharacterized protein  22.1      85  0.0029   19.4   3.0   52   47-120    15-77  (95)
 51 1nrp_R Receptor based peptide   21.8      17  0.0006   16.8  -0.1   10   25-34      6-15  (26)
 52 3r3p_A MobIle intron protein;   21.7      25 0.00086   22.4   0.6   23   78-101    76-98  (105)
 53 2joj_A Centrin protein; N-term  20.9      91  0.0031   17.1   3.0   26   90-120    26-51  (77)
 54 2kn2_A Calmodulin; S MAPK phos  20.8      94  0.0032   17.8   3.1   26   90-120    28-53  (92)
 55 1r69_A Repressor protein CI; g  20.4      25 0.00087   19.3   0.3   26   80-105    32-57  (69)

No 1  
>1aqu_A EST, estrogen sulfotransferase; PAP, sulfonation, 17-beta estradiol, steroid-binding; HET: A3P EST; 1.60A {Mus musculus} SCOP: c.37.1.5 PDB: 1aqy_A* 1bo6_A* 1hy3_A* 1g3m_A*
Probab=100.00  E-value=6.3e-38  Score=245.28  Aligned_cols=133  Identities=27%  Similarity=0.445  Sum_probs=122.3

Q ss_pred             CccccCCCCCCCCCccCCCCceEEEEecCchhhhHhhhhhhccCCC-CCCCCHHHHHHHHhcCCCccCChHHHhhhHh--
Q 042173            1 DFFPTHSPFASLPLSILTSNCGIVYLRTNPLDQFITDWQFIPRLRD-LEPSRIDEAFERACCGIQSFGPIWEHYFLFF--   77 (147)
Q Consensus         1 R~~ktHl~~~~lp~~~~~p~aKiI~i~RnP~D~~vS~y~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~--   77 (147)
                      |+||||+|++++|.++++|++|+|||+|||+|+++|+|+|...... ...++++++++.++.|...+|+||+|+.+||  
T Consensus       105 r~iktHlp~~~lp~~~~~~~~KiI~v~RnP~D~~vS~y~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~h~~~~~~~  184 (297)
T 1aqu_A          105 RIVKTHLPPKLLPASFWEKNCKMIYLCRNAKDVAVSYYYFLLMITSYPNPKSFSEFVEKFMQGQVPYGSWYDHVKAWWEK  184 (297)
T ss_dssp             CEEEECCCGGGSCHHHHHTTCEEEEEECCHHHHHHHHHHHHHHBTTSCCCSCHHHHHHHHHHTCSTTCCHHHHHHHHHHH
T ss_pred             cccccCCChhhCChhhcCCCceEEEEEecchHHeeehhHHhhccccCCCCCCHHHHHHHHhCCCcccccHHHHHHHHHHh
Confidence            7999999999999998889999999999999999999999865433 4567999999999999889999999999998  


Q ss_pred             ------hhhhccCccCChHHHHHHHHHHhCCCccchhhhhhHHHHHHHhcChhHHhhhhhhcCCCCC
Q 042173           78 ------IFLKYEDPKRDLTFCVKRLADFLGCSFSEGEEANGVIGEISKLCSFDNIKGLEATKFGKQP  138 (147)
Q Consensus        78 ------l~v~YEdL~~d~~~~v~~I~~FLG~~~~~~~~~~~~~~~iv~~~sf~~mk~~~~~~~g~~~  138 (147)
                            ++|+||||++||.+++++||+|||+++++++     +++|+++|||++||++++++.+..+
T Consensus       185 ~~~~~vl~l~YEdL~~dp~~~~~~i~~FLG~~~~~~~-----l~~iv~~~sf~~mk~~~~~~~~~~~  246 (297)
T 1aqu_A          185 SKNSRVLFMFYEDMKEDIRREVVKLIEFLERKPSAEL-----VDRIIQHTSFQEMKNNPSTNYTMMP  246 (297)
T ss_dssp             TTSTTEEEEEHHHHHHCHHHHHHHHHHHTTCCCCHHH-----HHHHHHHTSHHHHHHCTTTTTTTSC
T ss_pred             cccCCeEEEEhhhhhhhHHHHHHHHHHHcCCCCCHHH-----HHHHHHhCCHHHHHhchhccccccc
Confidence                  8999999999999999999999999999999     9999999999999999987765543


No 2  
>3mgb_A TEG12; sulfotransferase, glycopeptide, antibiotic, transferase-anti complex; HET: GHP 3MY 3FG OMY PAP; 2.04A {Uncultured soil bacterium} PDB: 3mgc_A* 3mg9_A* 3nib_A*
Probab=100.00  E-value=1.1e-37  Score=245.61  Aligned_cols=130  Identities=19%  Similarity=0.206  Sum_probs=106.5

Q ss_pred             CccccCCCC--CCCCCccCCCCceEEEEecCchhhhHhhhhhhccCCCCCCCCH---HHHH--HH----HhcCC--CccC
Q 042173            1 DFFPTHSPF--ASLPLSILTSNCGIVYLRTNPLDQFITDWQFIPRLRDLEPSRI---DEAF--ER----ACCGI--QSFG   67 (147)
Q Consensus         1 R~~ktHl~~--~~lp~~~~~p~aKiI~i~RnP~D~~vS~y~~~~~~~~~~~~~~---~~~~--~~----~~~~~--~~~~   67 (147)
                      |+||||||+  +++| ++++++||||||+|||+|++||+|||.+.........+   ++|+  +.    ++.|.  +.+|
T Consensus        96 RliKTHLP~~~~llP-s~~~~~~KvIYV~RNPKDv~VS~yhf~~~~~~~~~~~~~~~~~F~~~e~~~~~f~~g~~~~~~G  174 (319)
T 3mgb_A           96 VLVKTHLKADVPVLG-LYGEATAKVLYLVRNPRDMLLSSMRMASISRDDVEKSRDFARKFIANEGLGWNALGAGGGVGLG  174 (319)
T ss_dssp             EEEEECSCTTSTTGG-GGTTTEEEEEEEECCHHHHHHHHHHHTTCCTTCHHHHHHHHHHHHHHTSSTTCTTSGGGTTTTC
T ss_pred             CeEEecCCCchhhcc-ccccCCceEEEEecChHHHhhhHHHHhccchHHHHHhccCCcchhcccccccccccCccCcccc
Confidence            899999999  8999 88888999999999999999999999864321100112   2343  21    34443  3789


Q ss_pred             ChHHHhhhHh-h-----------hhhccCccCChHHHHHHHHHHh--CCCccchhhhhhHHHHHHHhcChhHHhhhhhhc
Q 042173           68 PIWEHYFLFF-I-----------FLKYEDPKRDLTFCVKRLADFL--GCSFSEGEEANGVIGEISKLCSFDNIKGLEATK  133 (147)
Q Consensus        68 ~~~~h~~~~~-l-----------~v~YEdL~~d~~~~v~~I~~FL--G~~~~~~~~~~~~~~~iv~~~sf~~mk~~~~~~  133 (147)
                      +||+|+++|| .           +|+||||++||.+++++||+||  |+++++++     +++|+++|||++||+++.++
T Consensus       175 ~w~~Hv~~W~~~~r~~~~~~~vl~l~YEDL~~Dp~~~v~kI~~FL~~G~~~~~e~-----l~~iv~~~SFe~MK~~~~~~  249 (319)
T 3mgb_A          175 SWPENVRSWTESSSDRFPNADVLTMRYEDLKGDPVARFSEIVEFLDLGGPVDIED-----IRRAVAASTLERMRELEKRS  249 (319)
T ss_dssp             CHHHHHHHHHSSHHHHSTTCEEEEEEHHHHHHCHHHHHHHHHHHHTCSSCCCHHH-----HHHHHHTTSHHHHHHHHHHC
T ss_pred             CHHHHHHHHHHhhhhccCCCCEEEEEHHHHHHhHHHHHHHHHHHHhcCCCCCHHH-----HHHHHHHCCHHHHHhhHhhc
Confidence            9999999998 3           6899999999999999999999  99999999     99999999999999999877


Q ss_pred             CCC
Q 042173          134 FGK  136 (147)
Q Consensus       134 ~g~  136 (147)
                      .+.
T Consensus       250 ~~~  252 (319)
T 3mgb_A          250 EQQ  252 (319)
T ss_dssp             ---
T ss_pred             ccc
Confidence            554


No 3  
>2zpt_X Tyrosine-ester sulfotransferase; SULT1D1, catecholamine, sulfonation; HET: A3P GOL; 1.15A {Mus musculus} PDB: 2zvp_X* 2zvq_X* 2zyt_X* 2zyu_X* 2zyv_X* 2zyw_X*
Probab=100.00  E-value=6.5e-37  Score=239.15  Aligned_cols=132  Identities=26%  Similarity=0.451  Sum_probs=121.7

Q ss_pred             CccccCCCCCCCCCccCCCCceEEEEecCchhhhHhhhhhhccCCC-CCCCCHHHHHHHHhcCCCccCChHHHhhhHh--
Q 042173            1 DFFPTHSPFASLPLSILTSNCGIVYLRTNPLDQFITDWQFIPRLRD-LEPSRIDEAFERACCGIQSFGPIWEHYFLFF--   77 (147)
Q Consensus         1 R~~ktHl~~~~lp~~~~~p~aKiI~i~RnP~D~~vS~y~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~--   77 (147)
                      |+||||+|++++|.++++|++|+|||+|||+|+++|+|++...... ...++++++++.++.|...+|+||+|+.+||  
T Consensus       103 r~iktHlp~~~lp~~~~~p~~KiI~v~RnP~D~~vS~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~y~~h~~~~~~~  182 (295)
T 2zpt_X          103 RIVKTHLPVQLLPSSFWKNDCKIIYVARNAKDVVVSYYYFYQMAKIHPEPGTWEEFLEKFMAGQVSFGPWYDHVKSWWEK  182 (295)
T ss_dssp             CEEEECCCGGGSCTHHHHTTCEEEEEECCHHHHHHHHHHHHHHBTTSCCCCSHHHHHHHHHTTCSTTCCHHHHHHHHHHH
T ss_pred             CeEecCCChhhcCccccCCCceEEEEecCcHHHeeehHHhhhcccccCCCCCHHHHHHHHHcCCCccccHHHHHHHHHHh
Confidence            7899999999999998889999999999999999999999865432 4567999999999999889999999999998  


Q ss_pred             ------hhhhccCccCChHHHHHHHHHHhCCCccchhhhhhHHHHHHHhcChhHHhhhhhhcCCCC
Q 042173           78 ------IFLKYEDPKRDLTFCVKRLADFLGCSFSEGEEANGVIGEISKLCSFDNIKGLEATKFGKQ  137 (147)
Q Consensus        78 ------l~v~YEdL~~d~~~~v~~I~~FLG~~~~~~~~~~~~~~~iv~~~sf~~mk~~~~~~~g~~  137 (147)
                            ++|+||||++||.+++++||+|||++++++.     +++|+++|||++||++++++.+..
T Consensus       183 ~~~~~vl~l~YEdL~~dp~~~~~~i~~FLG~~~~~~~-----l~~i~~~~sf~~mk~~~~~~~~~~  243 (295)
T 2zpt_X          183 RKEYRILYLFYEDMKENPKCEIQKILKFLEKDIPEEI-----LNKILYHSSFSVMKENPSANYTTM  243 (295)
T ss_dssp             TTTSCEEEEEHHHHHHCHHHHHHHHHHHTTCCCCHHH-----HHHHHHHTSHHHHHHCTTTSSTTS
T ss_pred             cCCCCeEEEEhHHhHhCHHHHHHHHHHHcCCCCCHHH-----HHHHHHHCCHHHHHhchhhccccc
Confidence                  8999999999999999999999999999999     999999999999999988776554


No 4  
>2reo_A Putative sulfotransferase 1C3; sulfate conjugation, PAP, structural genom consortium, SGC; HET: A3P; 2.65A {Homo sapiens} PDB: 2h8k_A*
Probab=100.00  E-value=1.1e-36  Score=238.92  Aligned_cols=132  Identities=28%  Similarity=0.440  Sum_probs=121.4

Q ss_pred             CccccCCCCCCCCCccCCCCceEEEEecCchhhhHhhhhhhccCCC-CCCCCHHHHHHHHhcCCCccCChHHHhhhHh--
Q 042173            1 DFFPTHSPFASLPLSILTSNCGIVYLRTNPLDQFITDWQFIPRLRD-LEPSRIDEAFERACCGIQSFGPIWEHYFLFF--   77 (147)
Q Consensus         1 R~~ktHl~~~~lp~~~~~p~aKiI~i~RnP~D~~vS~y~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~--   77 (147)
                      |+||||+|++++|.+++.|++|+|||+|||+|+++|+|++...... ....+++++++.++.|...+|+||+|+.+||  
T Consensus       113 r~iktHlp~~~lp~~~~~p~aKiI~v~RnP~D~~vS~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~v~~~~~~  192 (305)
T 2reo_A          113 QLIKTHLPSHLIPPSIWKENCKIVYVARNPKDCLVSYYHFHRMASFMPDPQNLEEFYEKFMSGKVVGGSWFDHVKGWWAA  192 (305)
T ss_dssp             CEEEECCCGGGSCHHHHHTTCEEEEEECCHHHHHHHHHHHHHHBTTSCCCCCHHHHHHHHHHTCSTTCCHHHHHHHHHHH
T ss_pred             ceEecCCChhhccchhcCCCccEEEEeeCcHHHheeHHHHhhccccCCCCCCHHHHHHHHhcCCCCCCcHHHHHHHHHHh
Confidence            7899999999999988889999999999999999999999765432 3567999999999999999999999999998  


Q ss_pred             ------hhhhccCccCChHHHHHHHHHHhCCCccchhhhhhHHHHHHHhcChhHHhhhhhhcCCCC
Q 042173           78 ------IFLKYEDPKRDLTFCVKRLADFLGCSFSEGEEANGVIGEISKLCSFDNIKGLEATKFGKQ  137 (147)
Q Consensus        78 ------l~v~YEdL~~d~~~~v~~I~~FLG~~~~~~~~~~~~~~~iv~~~sf~~mk~~~~~~~g~~  137 (147)
                            ++|+||||++||.+++++||+|||++++++.     +++++++|||++||++++++.+..
T Consensus       193 ~~~~~vl~l~YEdL~~dp~~~v~ri~~FLG~~~~~~~-----l~~i~~~~sf~~mk~~~~~~~~~~  253 (305)
T 2reo_A          193 KDMHRILYLFYEDIKKDPKREIEKILKFLEKDISEEI-----LNKIIYHTSFDVMKQNPMTNYTTL  253 (305)
T ss_dssp             TTTSCEEEEEHHHHHHCHHHHHHHHHHHHTCCCCHHH-----HHHHHHHTSHHHHHTCTTTSSCSS
T ss_pred             cCCCCEEEEEHHHHHHhHHHHHHHHHHHcCCCCCHHH-----HHHHHHhCCHHHHHhhhhhccccc
Confidence                  8999999999999999999999999999999     999999999999999998776543


No 5  
>3bfx_A Sulfotransferase 1C2; PAP, structural genomics, PSI, protein structure initiative, structural genomics consortium, SGC, alternative splicing; HET: A3P; 1.80A {Homo sapiens} SCOP: c.37.1.5
Probab=100.00  E-value=1.5e-36  Score=237.24  Aligned_cols=131  Identities=26%  Similarity=0.424  Sum_probs=116.1

Q ss_pred             CccccCCCCCCCCCccCCCCceEEEEecCchhhhHhhhhhhccCCC-CCCCCHHHHHHHHhcCCCccCChHHHhhhHh--
Q 042173            1 DFFPTHSPFASLPLSILTSNCGIVYLRTNPLDQFITDWQFIPRLRD-LEPSRIDEAFERACCGIQSFGPIWEHYFLFF--   77 (147)
Q Consensus         1 R~~ktHl~~~~lp~~~~~p~aKiI~i~RnP~D~~vS~y~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~--   77 (147)
                      |+||||+|++++|.+++.|++|+|||+|||+|+++|+|++...... ....+++++++.++.|...+|+||+|+.+||  
T Consensus       104 r~iktHlp~~~lp~~~~~p~akiI~i~RdP~D~~vS~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~  183 (296)
T 3bfx_A          104 RILKTHLSTQLLPPSFWENNCKFLYVARNAKDCMVSYYHFQRMNHMLPDPGTWEEYFETFINGKVVWGSWFDHVKGWWEM  183 (296)
T ss_dssp             CEEEECCCTTTSCTHHHHTTCEEEEEECCHHHHHHHHHHHHHHCTTSCCCCSHHHHHHHHHTTCSBTCCHHHHHHHHHHH
T ss_pred             ceEecCCChhhCCcccccCCceEEEEEcCHHHHHHHHHHHHhcccccCCCCCHHHHHHHHhcCCCCCCcHHHHHHHHHHh
Confidence            7899999999999988889999999999999999999999765432 4567999999999999999999999999998  


Q ss_pred             ------hhhhccCccCChHHHHHHHHHHhCCCccchhhhhhHHHHHHHhcChhHHhhhhhhcCCC
Q 042173           78 ------IFLKYEDPKRDLTFCVKRLADFLGCSFSEGEEANGVIGEISKLCSFDNIKGLEATKFGK  136 (147)
Q Consensus        78 ------l~v~YEdL~~d~~~~v~~I~~FLG~~~~~~~~~~~~~~~iv~~~sf~~mk~~~~~~~g~  136 (147)
                            ++|+||||++||.+++++||+|||++++++.     +++++++|||++||+++.++.+.
T Consensus       184 ~~~~~vl~v~YEdL~~dp~~~~~ri~~FLG~~~~~~~-----l~~i~~~~sf~~mk~~~~~~~~~  243 (296)
T 3bfx_A          184 KDRHQILFLFYEDIKRDPKHEIRKVMQFMGKKVDETV-----LDKIVQETSFEKMKENPMTNRST  243 (296)
T ss_dssp             TTTSEEEEEEHHHHHHCHHHHHHHHHHHTTCCCCHHH-----HHHHHHHTSHHHHHHC-------
T ss_pred             CCCcCEEEEEhHHHHhhhHHHHHHHHHHhCCCCCHHH-----HHHHHHHCCHHHHHhchhhcccc
Confidence                  8999999999999999999999999999999     99999999999999998766544


No 6  
>3ckl_A Sulfotransferase family cytosolic 1B member 1; SULT1B1, human cytosolic sulfotransferase, resveratrol, SGC, cytoplasm, lipid metabolism; HET: STL A3P; 2.00A {Homo sapiens} PDB: 2z5f_A*
Probab=100.00  E-value=1.8e-36  Score=236.88  Aligned_cols=132  Identities=24%  Similarity=0.376  Sum_probs=120.9

Q ss_pred             CccccCCCCCCCCCccCCCCceEEEEecCchhhhHhhhhhhccCCC-CCCCCHHHHHHHHhcCCCccCChHHHhhhHh--
Q 042173            1 DFFPTHSPFASLPLSILTSNCGIVYLRTNPLDQFITDWQFIPRLRD-LEPSRIDEAFERACCGIQSFGPIWEHYFLFF--   77 (147)
Q Consensus         1 R~~ktHl~~~~lp~~~~~p~aKiI~i~RnP~D~~vS~y~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~--   77 (147)
                      |+||||+|++++|.+++.|++|+||++|||+|+++|+|++...... ....+++++++.++.|...+|+||+|+.+||  
T Consensus       106 r~iktHlp~~~lp~~~~~p~akiI~v~RnP~D~~vS~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~  185 (298)
T 3ckl_A          106 RIVKTHLPTDLLPKSFWENNCKMIYLARNAKDVSVSYYHFDLMNNLQPFPGTWEEYLEKFLTGKVAYGSWFTHVKNWWKK  185 (298)
T ss_dssp             CEEEECCCTTTSCHHHHHTTCEEEEEECCHHHHHHHHHHHHHHBTTSCCCCSHHHHHHHHHHTCSTTCCHHHHHHHHHHT
T ss_pred             cEEecccchhhCChhhcCCCceEEEEEcChHHHHHHHHHHHhhccccCCCCCHHHHHHHHhcCCCCCCcHHHHHHHHHHh
Confidence            7899999999999988889999999999999999999999765432 4567999999999999889999999999999  


Q ss_pred             ------hhhhccCccCChHHHHHHHHHHhCCCccchhhhhhHHHHHHHhcChhHHhhhhhhcCCCC
Q 042173           78 ------IFLKYEDPKRDLTFCVKRLADFLGCSFSEGEEANGVIGEISKLCSFDNIKGLEATKFGKQ  137 (147)
Q Consensus        78 ------l~v~YEdL~~d~~~~v~~I~~FLG~~~~~~~~~~~~~~~iv~~~sf~~mk~~~~~~~g~~  137 (147)
                            ++|+||||++||.+++++||+|||++++++.     +++++++|||++||++++++.+..
T Consensus       186 ~~~~~vl~v~YEdL~~dp~~~v~ri~~FLG~~~~~~~-----l~~i~~~~sf~~mk~~~~~~~~~~  246 (298)
T 3ckl_A          186 KEEHPILFLYYEDMKENPKEEIKKIIRFLEKNLNDEI-----LDRIIHHTSFEVMKDNPLVNYTHL  246 (298)
T ss_dssp             TTTSCEEEEEHHHHHHCHHHHHHHHHHHTTCCCCHHH-----HHHHHHHTSHHHHHTCTTTSSTTS
T ss_pred             ccccceEEEEhHHHHhhHHHHHHHHHHHcCCCCCHHH-----HHHHHHHCCHHHHhhchhhccccc
Confidence                  8999999999999999999999999999999     999999999999999987765543


No 7  
>1fmj_A Retinol dehydratase; sulfotransferase, adenosine 3',5'- diphosphate; HET: A3P RTL; 2.00A {Spodoptera frugiperda} SCOP: c.37.1.5 PDB: 1fml_A* 1x8l_A* 1x8k_A* 1x8j_A*
Probab=100.00  E-value=2.8e-36  Score=241.06  Aligned_cols=128  Identities=30%  Similarity=0.506  Sum_probs=117.8

Q ss_pred             CccccCCCCCCCCCccCCCCceEEEEecCchhhhHhhhhhhccCCC-CCCCCHHHHHHHHhcCCCccCChHHHhhhHh--
Q 042173            1 DFFPTHSPFASLPLSILTSNCGIVYLRTNPLDQFITDWQFIPRLRD-LEPSRIDEAFERACCGIQSFGPIWEHYFLFF--   77 (147)
Q Consensus         1 R~~ktHl~~~~lp~~~~~p~aKiI~i~RnP~D~~vS~y~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~--   77 (147)
                      |+||||+|++++|.++++. +|+|||+|||+|+++|+|+|...... ...++++++++.++.|...+|+||+|+.+||  
T Consensus       159 R~ikTHlp~~llp~~~~~~-aKiI~v~RnP~D~~vS~y~~~~~~~~~~~~~~~~~~~~~f~~g~~~~g~~~~hv~~~w~~  237 (351)
T 1fmj_A          159 RFVKTHLPLSLMPPNMLDT-VKMVYLARDPRDVAVSSFHHARLLYLLNKQSNFKDFWEMFHRGLYTLTPYFEHVKEAWAK  237 (351)
T ss_dssp             CEEEECCCGGGSCTTGGGT-CEEEEEECCHHHHHHHHHHHHHHTTCSCTTCCHHHHHHHHHTTCSTTCCHHHHHHHHHTT
T ss_pred             eEEEeCCChhhcChhHhcc-CcEEEEEeCHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHhcCCCccChHHHHHHHHHHh
Confidence            7999999999999998875 99999999999999999999865432 4567999999999999999999999999998  


Q ss_pred             ------hhhhccCccCChHHHHHHHHHHhCCCccchhhhhhHHHHHHHhcChhHHhhhhhhcC
Q 042173           78 ------IFLKYEDPKRDLTFCVKRLADFLGCSFSEGEEANGVIGEISKLCSFDNIKGLEATKF  134 (147)
Q Consensus        78 ------l~v~YEdL~~d~~~~v~~I~~FLG~~~~~~~~~~~~~~~iv~~~sf~~mk~~~~~~~  134 (147)
                            ++|+||||++||.+++++||+|||+++++++     +++++++|||++||++++.|.
T Consensus       238 ~~~~~vl~l~YEDL~~Dp~~~v~ri~~FLG~~~~~~~-----l~~iv~~~Sf~~mk~~~~~n~  295 (351)
T 1fmj_A          238 RHDPNMLFLFYEDYLKDLPGCIARIADFLGKKLSEEQ-----IQRLCEHLNFEKFKNNGAVNM  295 (351)
T ss_dssp             TTSTTEEEEEHHHHHHCHHHHHHHHHHHTTCCCCHHH-----HHHHHHHTCHHHHHTCTTTSC
T ss_pred             cCCcCEEEEEchhhhhCHHHHHHHHHHhcCCCCCHHH-----HHHHHHhcCHHHHhhchhhcc
Confidence                  8999999999999999999999999999999     999999999999999866543


No 8  
>2gwh_A Sulfotransferase 1C2; sulfate conjugation, pentachlorophenol, PA pesticide, structural genomics, structural genomics consort transferase; HET: A3P PCI; 1.80A {Homo sapiens} PDB: 2ad1_A*
Probab=100.00  E-value=1.7e-36  Score=237.15  Aligned_cols=132  Identities=29%  Similarity=0.530  Sum_probs=121.5

Q ss_pred             CccccCCCCCCCCCccCCCCceEEEEecCchhhhHhhhhhhccCCC-CCCCCHHHHHHHHhcCCCccCChHHHhhhHh--
Q 042173            1 DFFPTHSPFASLPLSILTSNCGIVYLRTNPLDQFITDWQFIPRLRD-LEPSRIDEAFERACCGIQSFGPIWEHYFLFF--   77 (147)
Q Consensus         1 R~~ktHl~~~~lp~~~~~p~aKiI~i~RnP~D~~vS~y~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~--   77 (147)
                      |++|||+|++++|.+++.|++|+|||+|||+|+++|+|++...... ....+++++++.++.|...+|+||+|+.+||  
T Consensus       106 r~iktH~p~~~lp~~~~~p~aKiI~v~RnP~D~~vS~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~l~~~~~~  185 (298)
T 2gwh_A          106 RILKTHLPFHLLPPSLLEKNCKIIYVARNPKDNMVSYYHFQRMNKALPAPGTWEEYFETFLAGKVCWGSWHEHVKGWWEA  185 (298)
T ss_dssp             CEEEECCCGGGSCTHHHHTTCEEEEEECCHHHHHHHHHHHHHHBTTSCCCCSHHHHHHHHHTTCSBTCCHHHHHHHHHHH
T ss_pred             eEEechhhhhhccccccCCCceEEEEEeCchHHHhhHHHHHhhcccCCCCCCHHHHHHHHhcCCCCCCcHHHHHHHHHHh
Confidence            7999999999999988889999999999999999999999765432 3467999999999999999999999999998  


Q ss_pred             ------hhhhccCccCChHHHHHHHHHHhCCCccchhhhhhHHHHHHHhcChhHHhhhhhhcCCCC
Q 042173           78 ------IFLKYEDPKRDLTFCVKRLADFLGCSFSEGEEANGVIGEISKLCSFDNIKGLEATKFGKQ  137 (147)
Q Consensus        78 ------l~v~YEdL~~d~~~~v~~I~~FLG~~~~~~~~~~~~~~~iv~~~sf~~mk~~~~~~~g~~  137 (147)
                            ++|+||||++||.+++++||+|||++++++.     ++.++++|||++||++++++.+..
T Consensus       186 ~~~~~vl~l~YEdL~~dp~~~v~ri~~FLG~~~~~~~-----l~~i~~~~sf~~mk~~~~~~~~~~  246 (298)
T 2gwh_A          186 KDKHRILYLFYEDMKKNPKHEIQKLAEFIGKKLDDKV-----LDKIVHYTSFDVMKQNPMANYSSI  246 (298)
T ss_dssp             TTSSSEEEEEHHHHHHCHHHHHHHHHHHHTCCCCHHH-----HHHHHHHTSHHHHHTCTTTSSTTS
T ss_pred             cCCCCEEEEEHHHhhhCHHHHHHHHHHHcCCCCCHHH-----HHHHHHhCCHHHHHhchhhccccc
Confidence                  8999999999999999999999999999999     999999999999999988776544


No 9  
>1q20_A SULT2B1B, sulfotransferase family, cytosolic, 2B, member 1 isoform B; pregnenolone, cholesterol, PAP; HET: A3P PLO; 2.30A {Homo sapiens} SCOP: c.37.1.5 PDB: 1q1z_A* 1q22_A*
Probab=100.00  E-value=6.1e-36  Score=233.92  Aligned_cols=133  Identities=20%  Similarity=0.451  Sum_probs=122.1

Q ss_pred             CccccCCCCCCCCCccCCCCceEEEEecCchhhhHhhhhhhccCCC-CCCCCHHHHHHHHhcCCCccCChHHHhhhHh--
Q 042173            1 DFFPTHSPFASLPLSILTSNCGIVYLRTNPLDQFITDWQFIPRLRD-LEPSRIDEAFERACCGIQSFGPIWEHYFLFF--   77 (147)
Q Consensus         1 R~~ktHl~~~~lp~~~~~p~aKiI~i~RnP~D~~vS~y~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~--   77 (147)
                      |++|||+|++++|.++..|++|+|||+|||+|+++|+|++...... ....+++++++.++.|...+|+||+|+.+||  
T Consensus       107 r~iktH~p~~~lp~~l~~p~akiI~i~RdP~D~~vS~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~l~~~~~~  186 (299)
T 1q20_A          107 RLMSSHLPIQIFTKAFFSSKAKVIYMGRNPRDVVVSLYHYSKIAGQLKDPGTPDQFLRDFLKGEVQFGSWFDHIKGWLRM  186 (299)
T ss_dssp             CEEEECCCTTTSCGGGTTSCCEEEEEECCHHHHHHHHHHHHHHBTTSCCCCSHHHHHHHHHTTCSTTSCHHHHHHHHGGG
T ss_pred             cEEecCCChHhCcccccCCCcEEEEEecCcHHHHhhHHHHHhhccccCCCCCHHHHHHHHhcCCCccchHHHHHHHHHhc
Confidence            7899999999999999889999999999999999999999865443 3567999999999999999999999999998  


Q ss_pred             ------hhhhccCccCChHHHHHHHHHHhCCCccchhhhhhHHHHHHHhcChhHHhhhhhhcCCCCC
Q 042173           78 ------IFLKYEDPKRDLTFCVKRLADFLGCSFSEGEEANGVIGEISKLCSFDNIKGLEATKFGKQP  138 (147)
Q Consensus        78 ------l~v~YEdL~~d~~~~v~~I~~FLG~~~~~~~~~~~~~~~iv~~~sf~~mk~~~~~~~g~~~  138 (147)
                            ++|+||||++||.+++++||+|||++++++.     +++++++|||++||++++++.+.++
T Consensus       187 ~~~~~vl~v~YEdL~~dp~~~~~ri~~FLG~~~~~~~-----l~~i~~~~sf~~mk~~~~~~~~~~~  248 (299)
T 1q20_A          187 KGKDNFLFITYEELQQDLQGSVERICGFLGRPLGKEA-----LGSVVAHSTFSAMKANTMSNYTLLP  248 (299)
T ss_dssp             TTCTTEEEEEHHHHHHCHHHHHHHHHHHHTCCCCHHH-----HHHHHHHHSHHHHHTCTTTSCTTSC
T ss_pred             CCCCCEEEEEcHHhhhchHHHHHHHHHHcCCCCCHHH-----HHHHHHhCCHHHHHhhhhhccccCc
Confidence                  8999999999999999999999999999999     9999999999999999887765443


No 10 
>1q44_A RARO47, steroid sulfotransferase, AT2G03760/; APO, structu genomics, protein structure initiative, center for eukaryot structural genomics; 1.90A {Arabidopsis thaliana} SCOP: c.37.1.5 PDB: 2q3m_A
Probab=100.00  E-value=4.4e-37  Score=243.44  Aligned_cols=132  Identities=39%  Similarity=0.715  Sum_probs=107.6

Q ss_pred             CccccCCCCCCCCCccCCCCceEEEEecCchhhhHhhhhhhccCCC--CCCCCHHHHHHHHhcCCCccCChHHHhhhHh-
Q 042173            1 DFFPTHSPFASLPLSILTSNCGIVYLRTNPLDQFITDWQFIPRLRD--LEPSRIDEAFERACCGIQSFGPIWEHYFLFF-   77 (147)
Q Consensus         1 R~~ktHl~~~~lp~~~~~p~aKiI~i~RnP~D~~vS~y~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~-   77 (147)
                      |+||||+|++++|.++++|++|+|||+|||+|+++|+|+|......  ...++++++++.++.|...+|+||+|+.+|| 
T Consensus       135 r~iktHlp~~~lp~~~~~p~aKiI~v~RnP~Dv~vS~y~~~~~~~~~~~~~~~~~~~~~~f~~g~~~~g~~~~h~~~~w~  214 (326)
T 1q44_A          135 RLMNTHISHLSLPESVKSSSCKIVYCCRNPKDMFVSLWHFGKKLAPEETADYPIEKAVEAFCEGKFIGGPFWDHILEYWY  214 (326)
T ss_dssp             CEEEECCCGGGSCHHHHHSCCEEEEEECCHHHHHHHHHHHHHHC-------CCHHHHHHHHHHTCSTTCCHHHHHHHHHH
T ss_pred             eEEecccchhhcCccccCCCceEEEEeecchHheeeHHHHHhhcccccCCCCCHHHHHHHHHcCCCccChHHHHHHHHHH
Confidence            7999999999999998889999999999999999999999865432  3467999999999999889999999999988 


Q ss_pred             ---------hhhhccCccCChHHHHHHHHHHhCCCccchhhhhhHHHHHHHhcChhHHhhhhhhcCCC
Q 042173           78 ---------IFLKYEDPKRDLTFCVKRLADFLGCSFSEGEEANGVIGEISKLCSFDNIKGLEATKFGK  136 (147)
Q Consensus        78 ---------l~v~YEdL~~d~~~~v~~I~~FLG~~~~~~~~~~~~~~~iv~~~sf~~mk~~~~~~~g~  136 (147)
                               ++|+||||++||.+++++||+|||+++++++    .+++|+++|||++||+++.++.|.
T Consensus       215 ~~~~~~~~vl~l~YEDL~~Dp~~~v~ri~~FLG~~~~~~~----~l~~iv~~~sf~~mk~~~~~~~~~  278 (326)
T 1q44_A          215 ASRENPNKVLFVTYEELKKQTEVEMKRIAEFLECGFIEEE----EVREIVKLCSFESLSNLEVNKEGK  278 (326)
T ss_dssp             HHHHCTTTEEEEEHHHHHHTHHHHHHHHHHHHCSSCCCHH----HHHHHHHHHTTC------------
T ss_pred             hhhcCCccEEEEEHHHHHhCHHHHHHHHHHHhCCCCChHH----HHHHHHHhCCHHHHHhHhhhcccc
Confidence                     7899999999999999999999999998753    189999999999999988776554


No 11 
>1ls6_A ARYL sulfotransferase; SULT 1A1, PAP, P-nitrophenol, positive cooperativity, two substrate binding sites; HET: A3P NPO; 1.90A {Homo sapiens} SCOP: c.37.1.5 PDB: 2d06_A* 3u3o_A* 3u3k_A* 3u3m_A* 3u3j_A* 3u3r_A* 1z28_A* 3qvv_A* 3qvu_A* 1z29_A* 1cjm_A 2a3r_A*
Probab=100.00  E-value=2.9e-36  Score=235.28  Aligned_cols=133  Identities=26%  Similarity=0.463  Sum_probs=121.4

Q ss_pred             CccccCCCCCCCCCccCCCCceEEEEecCchhhhHhhhhhhccCCC-CCCCCHHHHHHHHhcCCCccCChHHHhhhHh--
Q 042173            1 DFFPTHSPFASLPLSILTSNCGIVYLRTNPLDQFITDWQFIPRLRD-LEPSRIDEAFERACCGIQSFGPIWEHYFLFF--   77 (147)
Q Consensus         1 R~~ktHl~~~~lp~~~~~p~aKiI~i~RnP~D~~vS~y~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~--   77 (147)
                      |+||||+|+.++|.+++.|++|+|||+|||+|+++|+|++...... ....+++++++.++.|...+|+||+|+.+||  
T Consensus       103 r~ikth~~~~~lp~~~~~p~akiI~i~RnP~D~~vS~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~  182 (295)
T 1ls6_A          103 RLLKTHLPLALLPQTLLDQKVKVVYVARNAKDVAVSYYHFYHMAKVHPEPGTWDSFLEKFMVGEVSYGSWYQHVQEWWEL  182 (295)
T ss_dssp             CEEEECCCTTTSCHHHHHTTCEEEEEECCHHHHHHHHHHHHHHBTTSCCCCCHHHHHHHHHHTCSTTCCHHHHHHHHHHH
T ss_pred             ceeecchhhhhcchhhhccCccEEEEEeCcHHHHhHHHHHHhccccCCCCCCHHHHHHHHhcCCCceecHHHHHHHHHHh
Confidence            7899999999999988789999999999999999999999765432 3567999999999999889999999999998  


Q ss_pred             ------hhhhccCccCChHHHHHHHHHHhCCCccchhhhhhHHHHHHHhcChhHHhhhhhhcCCCCC
Q 042173           78 ------IFLKYEDPKRDLTFCVKRLADFLGCSFSEGEEANGVIGEISKLCSFDNIKGLEATKFGKQP  138 (147)
Q Consensus        78 ------l~v~YEdL~~d~~~~v~~I~~FLG~~~~~~~~~~~~~~~iv~~~sf~~mk~~~~~~~g~~~  138 (147)
                            ++|+||||++||.+++++||+|||++++++.     +++++++|||++||++++++.+..+
T Consensus       183 ~~~~~vl~v~YEdL~~dp~~~~~ri~~FLG~~~~~~~-----l~~i~~~~sf~~mk~~~~~~~~~~~  244 (295)
T 1ls6_A          183 SRTHPVLYLFYEDMKENPKREIQKILEFVGHSLPEET-----VDFMVQHTSFKEMKKNPMTNYTTVP  244 (295)
T ss_dssp             TTTSCEEEEEHHHHHHCHHHHHHHHHHHHTCCCCHHH-----HHHHHHHTSHHHHHHCTTTSCTTSC
T ss_pred             ccCcCeEEEEhHHhhhhhHHHHHHHHHHhCCCCCHHH-----HHHHHHHCCHHHHhhchhhcccccc
Confidence                  8999999999999999999999999999998     9999999999999999887765543


No 12 
>1j99_A Alcohol sulfotransferase; dehydroepiandosterone, DHEA; HET: AND; 1.99A {Homo sapiens} SCOP: c.37.1.5 PDB: 1ov4_A* 3f3y_A* 2qp3_A* 2qp4_A* 1efh_A*
Probab=100.00  E-value=1.2e-35  Score=231.61  Aligned_cols=131  Identities=26%  Similarity=0.528  Sum_probs=120.6

Q ss_pred             CccccCCCCCCCCCccCCCCceEEEEecCchhhhHhhhhhhccCCC-CCCCCHHHHHHHHhcCCCccCChHHHhhhHh--
Q 042173            1 DFFPTHSPFASLPLSILTSNCGIVYLRTNPLDQFITDWQFIPRLRD-LEPSRIDEAFERACCGIQSFGPIWEHYFLFF--   77 (147)
Q Consensus         1 R~~ktHl~~~~lp~~~~~p~aKiI~i~RnP~D~~vS~y~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~--   77 (147)
                      |++|||+|++++|.++++|++|+|||+|||+|+++|+|++...... ....+++++++.++.|...+|+||+|+.+||  
T Consensus       102 r~~ktH~~~~~lp~~~~~p~akiI~i~RdP~D~~vS~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~  181 (293)
T 1j99_A          102 RLFSSHLPIQLFPKSFFSSKAKVIYLMRNPRDVLVSGYFFWKNMKFLKKPKSWEEYFEWFCQGTVLYGSWFDHIHGWMPM  181 (293)
T ss_dssp             CEEEECCCGGGSCGGGGGSCCEEEEEECCHHHHHHHHHHHHTTBTTSCCCSSHHHHHHHHHHTCSBTSCHHHHHHHHGGG
T ss_pred             cEEecCCChHHCcccccCCCcEEEEEecCcHHHHhhHHHHHhhhhccCCCCCHHHHHHHHhcCCCCCCcHHHHHHHHHhc
Confidence            7899999999999998889999999999999999999999865433 3567899999999999889999999999998  


Q ss_pred             ------hhhhccCccCChHHHHHHHHHHhCCCccchhhhhhHHHHHHHhcChhHHhhhhhhcCCC
Q 042173           78 ------IFLKYEDPKRDLTFCVKRLADFLGCSFSEGEEANGVIGEISKLCSFDNIKGLEATKFGK  136 (147)
Q Consensus        78 ------l~v~YEdL~~d~~~~v~~I~~FLG~~~~~~~~~~~~~~~iv~~~sf~~mk~~~~~~~g~  136 (147)
                            ++|+||||++||.+++++||+|||++++++.     +++++++|||++||++++++.+.
T Consensus       182 ~~~~~vl~l~YEdL~~dp~~~~~~i~~FLG~~~~~~~-----l~~i~~~~sf~~mk~~~~~~~~~  241 (293)
T 1j99_A          182 REEKNFLLLSYEELKQDTGRTIEKICQFLGKTLEPEE-----LNLILKNSSFQSMKENKMSNYSL  241 (293)
T ss_dssp             TTSTTEEEEEHHHHHHCHHHHHHHHHHHHTCCCCHHH-----HHHHHHHTCHHHHHTCTTTSSTT
T ss_pred             cCCcCEEEEEhHHhHhCHHHHHHHHHHHcCCCCCHHH-----HHHHHHhCCHHHHHhchhhcccc
Confidence                  8999999999999999999999999999999     99999999999999998766544


No 13 
>1q1q_A SULT2B1A, sulfotransferase family, cytosolic, 2B, member 1 isoform A; pregnenolone, PAP; HET: A3P NHE; 2.91A {Homo sapiens} SCOP: c.37.1.5
Probab=100.00  E-value=1.1e-34  Score=231.83  Aligned_cols=131  Identities=20%  Similarity=0.443  Sum_probs=121.1

Q ss_pred             CccccCCCCCCCCCccCCCCceEEEEecCchhhhHhhhhhhccCCC-CCCCCHHHHHHHHhcCCCccCChHHHhhhHh--
Q 042173            1 DFFPTHSPFASLPLSILTSNCGIVYLRTNPLDQFITDWQFIPRLRD-LEPSRIDEAFERACCGIQSFGPIWEHYFLFF--   77 (147)
Q Consensus         1 R~~ktHl~~~~lp~~~~~p~aKiI~i~RnP~D~~vS~y~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~--   77 (147)
                      |+||||+|++++|.+++.|++|+|||+|||+|+++|+|++...... ....+++++++.++.|...+|.||+|+.+||  
T Consensus       105 r~iktHlp~~~lp~~l~~p~aKiI~i~RdP~Dv~vS~y~~~~~~~~~~~~~~~~~~~~~f~~g~~~~g~y~~hl~~~~~~  184 (350)
T 1q1q_A          105 RLMSSHLPIQIFTKAFFSSKAKVIYMGRNPRDVVVSLYHYSKIAGQLKDPGTPDQFLRDFLKGEVQFGSWFDHIKGWLRM  184 (350)
T ss_dssp             CEEEECCCTTTSCGGGTTSCCEEEEEECCHHHHHHHHHHHHHHBSSSCCCCSHHHHHHHHHTTCSTTCCHHHHHHHHHTT
T ss_pred             eEEEecCchhhCchhhcCCCcEEEEEecCHHHHHHHHHHHHhhccccCCCCCHHHHHHHHhcCCccccHHHHHHHHHHHc
Confidence            7899999999999999889999999999999999999999865443 4567899999999999999999999999998  


Q ss_pred             ------hhhhccCccCChHHHHHHHHHHhCCCccchhhhhhHHHHHHHhcChhHHhhhhhhcCCC
Q 042173           78 ------IFLKYEDPKRDLTFCVKRLADFLGCSFSEGEEANGVIGEISKLCSFDNIKGLEATKFGK  136 (147)
Q Consensus        78 ------l~v~YEdL~~d~~~~v~~I~~FLG~~~~~~~~~~~~~~~iv~~~sf~~mk~~~~~~~g~  136 (147)
                            ++|+||||++||.+++++||+|||++++++.     +++++++|||++||++++++.+.
T Consensus       185 ~~~~~vl~l~YEDL~~Dp~~~l~rI~~FLGl~~~~~~-----l~~iv~~~sf~~mk~~~~~~~~~  244 (350)
T 1q1q_A          185 KGKDNFLFITYEELQQDLQGSVERICGFLGRPLGKEA-----LGSVVAHSTFSAMKANTMSNYTL  244 (350)
T ss_dssp             TTCSSEEEEEHHHHHHCHHHHHHHHHHHHTCCCCHHH-----HHHHHHHHSHHHHHTCTTTSSTT
T ss_pred             CCCcCEEEEEhHHhhhCHHHHHHHHHHHcCCCCCHHH-----HHHHHHHCCHHHHHhhHhhcccc
Confidence                  8999999999999999999999999999999     99999999999999998876544


No 14 
>2ov8_A STAL; sulfotransferase, structural genomics, montr kingston bacterial structural genomics initiative, BSGI, UN function; 2.58A {Streptomyces toyocaensis} PDB: 2ovb_A 2ovf_A*
Probab=100.00  E-value=1.3e-34  Score=225.66  Aligned_cols=122  Identities=17%  Similarity=0.185  Sum_probs=108.5

Q ss_pred             CccccCCCC--CCC--CCccCCCCceEEEEecCchhhhHhhhhhhccCCCCCCCCHHHHHHHHh--------cCCCccCC
Q 042173            1 DFFPTHSPF--ASL--PLSILTSNCGIVYLRTNPLDQFITDWQFIPRLRDLEPSRIDEAFERAC--------CGIQSFGP   68 (147)
Q Consensus         1 R~~ktHl~~--~~l--p~~~~~p~aKiI~i~RnP~D~~vS~y~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~   68 (147)
                      |+||||+|+  +++  |.+   |++|+|||+|||+|+++|+|++....... +.+++++++.|+        .|...+|+
T Consensus        80 r~iktHlp~~~~ll~~p~~---p~aKiI~v~RnP~D~~vS~y~~~~~~~~~-~~~~~~~~~~f~~~~~~~~~~g~~~~g~  155 (288)
T 2ov8_A           80 VLLATHFTADRPVLRFYRE---STAKVVCLIRNPRDAMLSLMRMKGIPPED-VEACRKIAETFIADEGFSSVRIWAGEGS  155 (288)
T ss_dssp             EEEEECSCTTCGGGGGGTT---TEEEEEEEECCHHHHHHHHHTTC-------CTTTTTHHHHHHHHTBSTTCTTCCSCCB
T ss_pred             eeEEeeCCCcHHhhcCCCC---CCceEEEEeeCHHHHHHHHHHHHHhcCCC-CCCHHHHHHHHHhccccccccCCcccCc
Confidence            689999999  999  876   79999999999999999999987654322 568888998888        78888999


Q ss_pred             hHHHhhhHh------------hhhhccCccCChHHHHHHHHHHhCCCccchhhhhhHHHHHHHhcChhHHhhhhhh
Q 042173           69 IWEHYFLFF------------IFLKYEDPKRDLTFCVKRLADFLGCSFSEGEEANGVIGEISKLCSFDNIKGLEAT  132 (147)
Q Consensus        69 ~~~h~~~~~------------l~v~YEdL~~d~~~~v~~I~~FLG~~~~~~~~~~~~~~~iv~~~sf~~mk~~~~~  132 (147)
                      ||+|+.+||            ++|+||||++||.+++++||+|||++ +++.     +++++++|||++||+++++
T Consensus       156 ~~~hv~~~~~~~~~~~~~~~vl~l~YEDL~~Dp~~~l~rI~~FLGl~-~~~~-----l~~iv~~~sf~~mk~~~~~  225 (288)
T 2ov8_A          156 WPENIRSWTDSVHESFPNAAVLAVRYEDLRKDPEGELWKVVDFLELG-GRDG-----VADAVANCTLERMREMEER  225 (288)
T ss_dssp             HHHHHHHHTTTGGGTCTTCEEEEEEHHHHHHCHHHHHHHHHHHTTCS-CSST-----HHHHHHHCCTTHHHHHHHH
T ss_pred             HHHHHHHHHHhhhhcCCCccEEEEEHHHHHHhHHHHHHHHHHHcCCC-CHHH-----HHHHHHhCCHHHHHhChhh
Confidence            999999997            58999999999999999999999999 9999     9999999999999999987


No 15 
>1zd1_A Sulfotransferase 4A1; SGC, SULT4A1, structural genomics, structural genomics conso transferase; 2.24A {Homo sapiens}
Probab=100.00  E-value=8.6e-34  Score=220.31  Aligned_cols=132  Identities=27%  Similarity=0.477  Sum_probs=115.2

Q ss_pred             CccccCCCCCCCCCccCCCCceEEEEecCchhhhHhhhhhhccCCC-CCCCCHHHHHHHHhcCCCccCChHHHhhhHh--
Q 042173            1 DFFPTHSPFASLPLSILTSNCGIVYLRTNPLDQFITDWQFIPRLRD-LEPSRIDEAFERACCGIQSFGPIWEHYFLFF--   77 (147)
Q Consensus         1 R~~ktHl~~~~lp~~~~~p~aKiI~i~RnP~D~~vS~y~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~--   77 (147)
                      |+||||+|+.++|.+++.|++|+|||+|||+|+++|+|++...... ....+++++++.++.|...+|+||+|+.+||  
T Consensus       106 r~ikthl~~~~lp~~~~~p~akiI~i~RdP~D~~~S~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~  185 (284)
T 1zd1_A          106 RLIKSHLPYRFLPSDLHNGDSKVIYMARNPKDLVVSYYQFHRSLRTMSYRGTFQEFCRRFMNDKLGYGSWFEHVQEFWEH  185 (284)
T ss_dssp             CEEEECSCGGGSCHHHHTTCSEEEEEECCHHHHHHHHHHCC---------CCHHHHHHHHHTTCSTTCCHHHHHHHHHTT
T ss_pred             CccccCCChhhccccccCCCceEEEEEEcHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHhcCCCCCCcHHHHHHHHHHh
Confidence            7899999999999988889999999999999999999998764332 3457899999999999888999999999998  


Q ss_pred             ------hhhhccCccCChHHHHHHHHHHhCCCccchhhhhhHHHHHHHhcChhHHhhhhh-----hcCCCCC
Q 042173           78 ------IFLKYEDPKRDLTFCVKRLADFLGCSFSEGEEANGVIGEISKLCSFDNIKGLEA-----TKFGKQP  138 (147)
Q Consensus        78 ------l~v~YEdL~~d~~~~v~~I~~FLG~~~~~~~~~~~~~~~iv~~~sf~~mk~~~~-----~~~g~~~  138 (147)
                            ++|+||||++||.+++++||+|||++++++.     ++.++++||| +||+++.     -+.|.+|
T Consensus       186 ~~~~~vl~v~YEdL~~dp~~~l~~i~~FLGl~~~~~~-----l~~~~~~~sf-~mk~~~~~~~~~~rkg~~g  251 (284)
T 1zd1_A          186 RMDSNVLFLKYEDMHRDLVTMVEQLARFLGVSCDKAQ-----LEALTEHCHQ-LVDQCCNAEALPVGRGRVG  251 (284)
T ss_dssp             TTSTTEEEEETTHHHHCHHHHHHHHHHHTTCCCCHHH-----HHHHHHHHHH-HHHTTBCTTSSBSSTTCTT
T ss_pred             hCCCCEEEEEhHHHHhCHHHHHHHHHHHhCCCCCHHH-----HHHHHHHCCh-hhhhCcccCCCcccCCCCC
Confidence                  8999999999999999999999999999999     9999999999 9998763     2456666


No 16 
>3rnl_A Sulfotransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.75A {Alicyclobacillus acidocaldarius subsp}
Probab=99.77  E-value=1.9e-19  Score=141.49  Aligned_cols=86  Identities=17%  Similarity=0.253  Sum_probs=73.7

Q ss_pred             CCCceEEEEecCchhhhHhhhhhhccCCCCCCCCHHHHHHHHh---cC-------CCccCChHHHhhhHh--------hh
Q 042173           18 TSNCGIVYLRTNPLDQFITDWQFIPRLRDLEPSRIDEAFERAC---CG-------IQSFGPIWEHYFLFF--------IF   79 (147)
Q Consensus        18 ~p~aKiI~i~RnP~D~~vS~y~~~~~~~~~~~~~~~~~~~~~~---~~-------~~~~~~~~~h~~~~~--------l~   79 (147)
                      .|+||||||+|||+|+++|+|+|....... ..+|+++++.++   .|       ...+|.|++|+..|+        ++
T Consensus       107 ~P~aKiI~ilRnP~dra~S~y~~~~~~~~~-~~sf~e~~~~~~~r~~g~~~~~~~~~~~g~Y~~~l~~w~~~~~~~~vl~  185 (311)
T 3rnl_A          107 YPDAKILIMLRNPVDRAFSAYMHLVRDERE-TLSFRESLAKEEERIRQHYEPLWYYRAVGLYAAQVKRYLDVFGREQVKV  185 (311)
T ss_dssp             CTTCEEEEEECCHHHHHHHHHHHHHHTTSC-CSCHHHHHHTHHHHHHTTCCGGGCTTGGGCHHHHHHHHHHHHCGGGEEE
T ss_pred             CCCCeEEEEecCHHHHHHHHHHHHHHcCCC-CCCHHHHHHHhhhccccccccccccccCCcHHHHHHHHHHhCCccceEE
Confidence            489999999999999999999998654432 338999887654   22       456799999999998        89


Q ss_pred             hhccCccCChHHHHHHHHHHhCCCc
Q 042173           80 LKYEDPKRDLTFCVKRLADFLGCSF  104 (147)
Q Consensus        80 v~YEdL~~d~~~~v~~I~~FLG~~~  104 (147)
                      |+||||++||.+++++||+|||++.
T Consensus       186 v~yEdl~~dp~~~~~~i~~FLGl~~  210 (311)
T 3rnl_A          186 ILFEEFARDPVQVVRDCCAFLGVST  210 (311)
T ss_dssp             EEHHHHHHCHHHHHHHHHHHHTSCS
T ss_pred             EEHHHHHhCHHHHHHHHHHHhCCCC
Confidence            9999999999999999999999985


No 17 
>1t8t_A Heparan sulfate D-glucosaminyl 3-O- sulfotransferase 3A1; alpha-beta motif, substrate-binding cleft; HET: A3P CIT; 1.85A {Homo sapiens} SCOP: c.37.1.5 PDB: 1t8u_A*
Probab=99.75  E-value=6e-20  Score=140.62  Aligned_cols=88  Identities=18%  Similarity=0.272  Sum_probs=70.7

Q ss_pred             CCceEEEEecCchhhhHhhhhhhccCCCCCCCCHHHH-HHHHhcCCC-------ccCChHHHhhhHh--------hhhhc
Q 042173           19 SNCGIVYLRTNPLDQFITDWQFIPRLRDLEPSRIDEA-FERACCGIQ-------SFGPIWEHYFLFF--------IFLKY   82 (147)
Q Consensus        19 p~aKiI~i~RnP~D~~vS~y~~~~~~~~~~~~~~~~~-~~~~~~~~~-------~~~~~~~h~~~~~--------l~v~Y   82 (147)
                      |++|+|+++|||+|+++|+|++..... ....+|+++ ++.+..|..       .+|.|++|+..|+        ++|+|
T Consensus        99 p~aKiI~v~RdP~d~~~S~~~~~~~~~-~~~~~f~~~~~~~~~~g~~~~~~~~~~~~~y~~~l~~w~~~~~~~~vl~v~y  177 (271)
T 1t8t_A           99 KDTKLIVVVRDPVTRAISDYTQTLSKR-PDIPTFESLTFKNRTAGLIDTSWSAIQIGIYAKHLEHWLRHFPIRQMLFVSG  177 (271)
T ss_dssp             TTCEEEEEECCHHHHHHHHHHHHHHHC-TTSCCHHHHHBCC---CCBCTTSHHHHTTCHHHHHHHHTTTSCGGGEEEEEH
T ss_pred             CCCeEEEEeCCHHHHHHHHHHHHHhcC-CCCcCHHHHHHhcccccccccccccccCchHHHHHHHHHHhCCHhhEEEEEH
Confidence            799999999999999999999875433 234578776 233344543       4689999999998        89999


Q ss_pred             cCccCChHHHHHHHHHHhCCCccch
Q 042173           83 EDPKRDLTFCVKRLADFLGCSFSEG  107 (147)
Q Consensus        83 EdL~~d~~~~v~~I~~FLG~~~~~~  107 (147)
                      |||++||.+++++||+|||+++.+.
T Consensus       178 Edl~~dp~~~~~~l~~FLGl~~~~~  202 (271)
T 1t8t_A          178 ERLISDPAGELGRVQDFLGLKRIIT  202 (271)
T ss_dssp             HHHHHCHHHHHHHHHHHHTCCCCCC
T ss_pred             HHhhhCHHHHHHHHHHHcCCCCccc
Confidence            9999999999999999999998653


No 18 
>3uan_A Heparan sulfate glucosamine 3-O-sulfotransferase; alpha/beta motif, CO-FACT PAPS/PAP, heparan sulfate oligosaccharides, golgi-localized transferase; HET: A3P NGY BDP SGN IDS; 1.84A {Mus musculus} PDB: 1vkj_A* 1zrh_A*
Probab=99.75  E-value=2.2e-19  Score=138.67  Aligned_cols=87  Identities=11%  Similarity=0.140  Sum_probs=70.2

Q ss_pred             CCCceEEEEecCchhhhHhhhhhhccC---CCCCCCCHHHHHHHHhcCC-------CccCChHHHhhhHh--------hh
Q 042173           18 TSNCGIVYLRTNPLDQFITDWQFIPRL---RDLEPSRIDEAFERACCGI-------QSFGPIWEHYFLFF--------IF   79 (147)
Q Consensus        18 ~p~aKiI~i~RnP~D~~vS~y~~~~~~---~~~~~~~~~~~~~~~~~~~-------~~~~~~~~h~~~~~--------l~   79 (147)
                      .|+||||+|+|||+|+++|+|+|....   ......+|++++.  ..|.       +.+|.|++|+..|+        ++
T Consensus        99 ~P~aKiI~vlRnPvDra~S~y~~~~~~~~~~~~~~~sfe~~~~--~~g~~~~~~~~l~~g~Y~~~l~~w~~~~~~~~il~  176 (269)
T 3uan_A           99 NPTIRLLLILRDPSERVLSDYTQVLYNHLQKHKPYPPIEDLLM--RDGRLNLDYKALNRSLYHAHMLNWLRFFPLGHIHI  176 (269)
T ss_dssp             CTTCEEEEEECCHHHHHHHHHHHHHHHHHHTTCCCCCHHHHHB--C--CBCTTCHHHHHTCHHHHHHHHHTTSCGGGEEE
T ss_pred             CCCCcEEEEEcCHHHHHHHHHHHHHhhcccccCCccCHHHHHH--hcCCccccccccccchHHHHHHHHHHhCCccceEE
Confidence            489999999999999999999987421   1134568888753  2332       34589999999998        89


Q ss_pred             hhccCccCChHHHHHHHHHHhCCCccc
Q 042173           80 LKYEDPKRDLTFCVKRLADFLGCSFSE  106 (147)
Q Consensus        80 v~YEdL~~d~~~~v~~I~~FLG~~~~~  106 (147)
                      |+||||++||.+++++|++|||++...
T Consensus       177 v~yEdl~~dp~~~~~~i~~FLGl~~~~  203 (269)
T 3uan_A          177 VDGDRLIRDPFPEIQKVERFLKLSPQI  203 (269)
T ss_dssp             EEHHHHHHCHHHHHHHHHHHTTCCSCC
T ss_pred             EEHHHHHHCHHHHHHHHHHHhCCCCCc
Confidence            999999999999999999999998654


No 19 
>3bd9_A Heparan sulfate glucosamine 3-O-sulfotransferase 5; heparan sulfate biosynthesis, substrate specificity, glycoprotein, golgi apparatus, membrane; HET: A3P; 2.30A {Homo sapiens}
Probab=99.71  E-value=2.7e-18  Score=132.43  Aligned_cols=89  Identities=8%  Similarity=0.012  Sum_probs=70.2

Q ss_pred             CCceEEEEecCchhhhHhhhhhhccCC---CCCCCCHHHHHHHHhcCC-------CccCChHHHhhhHh--------hhh
Q 042173           19 SNCGIVYLRTNPLDQFITDWQFIPRLR---DLEPSRIDEAFERACCGI-------QSFGPIWEHYFLFF--------IFL   80 (147)
Q Consensus        19 p~aKiI~i~RnP~D~~vS~y~~~~~~~---~~~~~~~~~~~~~~~~~~-------~~~~~~~~h~~~~~--------l~v   80 (147)
                      |+||+|+|+|||+|+++|+|++.....   .....+++++......|.       +..|.|++|+..|+        ++|
T Consensus       108 P~aKiI~i~RdP~d~~~S~y~~~~~~~~~~~~~~~~f~~~~~~~~~g~~~~~~~~~~~g~y~~~l~~w~~~~~~~~il~l  187 (280)
T 3bd9_A          108 SSIKLLIIVREPTTRAISDYTQVLEGKERKNKTYYKFEKLAIDPNTCEVNTKYKAVRTSIYTKHLERWLKYFPIEQFHVV  187 (280)
T ss_dssp             TTCEEEEEECCHHHHHHHHHHHHHHHHHHTTCCCCCHHHHHBCTTTCSBCTTSHHHHHTCHHHHHHHHHTTSCGGGEEEE
T ss_pred             CCCeEEEEeCCHHHHHHHHHHHHHHhcccccCccCCHHHHHhhcccCCccccccccccchHHHHHHHHHHhCCHHHEEEE
Confidence            899999999999999999998774321   123567877542222232       23578999999998        899


Q ss_pred             hccCccCChHHHHHHHHHHhCCCccch
Q 042173           81 KYEDPKRDLTFCVKRLADFLGCSFSEG  107 (147)
Q Consensus        81 ~YEdL~~d~~~~v~~I~~FLG~~~~~~  107 (147)
                      +||||++||.+++++||+|||+++...
T Consensus       188 ~yEdL~~dp~~~l~~l~~FLGl~~~~~  214 (280)
T 3bd9_A          188 DGDRLITEPLPELQLVEKFLNLPPRIS  214 (280)
T ss_dssp             EHHHHHHCHHHHHHHHHHHTTCCCCCC
T ss_pred             EHHHHhhCHHHHHHHHHHHcCCCCccc
Confidence            999999999999999999999997654


No 20 
>2zq5_A Putative uncharacterized protein; sulfotransferase fold; 2.00A {Mycobacterium tuberculosis}
Probab=99.70  E-value=6.7e-18  Score=135.77  Aligned_cols=101  Identities=9%  Similarity=-0.026  Sum_probs=71.5

Q ss_pred             CCceEEEEecCchhhhHhhhhhhccCCC--CCCCCHHHHHHHHhcCCCccCChHHHhhhHh--------hhhhccCccCC
Q 042173           19 SNCGIVYLRTNPLDQFITDWQFIPRLRD--LEPSRIDEAFERACCGIQSFGPIWEHYFLFF--------IFLKYEDPKRD   88 (147)
Q Consensus        19 p~aKiI~i~RnP~D~~vS~y~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~--------l~v~YEdL~~d   88 (147)
                      |+|||||++|||+|+++|+|++......  ....++++..+.++.   .++.+++++..++        ++|+||||++|
T Consensus       247 P~akiI~l~RdP~dv~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~vl~v~YEdL~~d  323 (384)
T 2zq5_A          247 PDALVVQTHRPVETIMASMCSLAQHTTEGWSTKFVGAQIGADAMD---TWSRGLERFNAARAKYDSAQFYDVDYHDLIAD  323 (384)
T ss_dssp             TTCEEEEEECCGGGTHHHHHHHHHHHTTTSBSSSSHHHHHHHHHH---HHHHHHHHHHHHHTTSCGGGEEEEEHHHHHHC
T ss_pred             CCCEEEEEeeCHHHHHHHHHHHHHHhhhhccCCCCHHHHHHHHHH---HHHHHHHHHHHHHHhCCCCCEEEeEHHHHHhC
Confidence            7999999999999999999987654221  223466666555442   1222334444443        88999999999


Q ss_pred             hHHHHHHHHHHhCCCccchhhhhhHHHHHHHhcChhHHh
Q 042173           89 LTFCVKRLADFLGCSFSEGEEANGVIGEISKLCSFDNIK  127 (147)
Q Consensus        89 ~~~~v~~I~~FLG~~~~~~~~~~~~~~~iv~~~sf~~mk  127 (147)
                      |.+++++||+|||++++++.     ++++.+.++.....
T Consensus       324 P~~~l~ri~~FLGl~~~~~~-----~~~i~~~~~~~~~~  357 (384)
T 2zq5_A          324 PLGTVADIYRHFGLTLSDEA-----RQAMTTVHAESQSG  357 (384)
T ss_dssp             HHHHHHHHHHHTTCCCCHHH-----HHHHHC--------
T ss_pred             HHHHHHHHHHHhCCCCCHHH-----HHHHHHHHHhCccc
Confidence            99999999999999999999     99999999887664


No 21 
>1nst_A NST1, heparan sulfate N-deacetylase/N-sulfotransferase; PAP, haparin sulfate, haparin sulfate biosynthesis, glycoprotein; HET: A3P; 2.30A {Homo sapiens} SCOP: c.37.1.5
Probab=99.67  E-value=4.7e-18  Score=133.69  Aligned_cols=87  Identities=14%  Similarity=0.106  Sum_probs=68.9

Q ss_pred             CCceEEEEecCchhhhHhhhhhhccCCC--CCCCCHHHHHHHHhc----------CCCccCChHHHhhhHh--------h
Q 042173           19 SNCGIVYLRTNPLDQFITDWQFIPRLRD--LEPSRIDEAFERACC----------GIQSFGPIWEHYFLFF--------I   78 (147)
Q Consensus        19 p~aKiI~i~RnP~D~~vS~y~~~~~~~~--~~~~~~~~~~~~~~~----------~~~~~~~~~~h~~~~~--------l   78 (147)
                      |+||+|+|+|||+|+++|+|+|......  ....+++++++....          +.+..|.|++|+..|+        +
T Consensus       138 P~aKiI~i~RdP~d~a~S~y~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~g~Y~~~l~~w~~~~~~~~il  217 (325)
T 1nst_A          138 PKAKVLTILINPADRAYSWYQHQRAHDDPVALKYTFHEVITAGSDASSKLRALQNRCLVPGWYATHIERWLSAYHANQIL  217 (325)
T ss_dssp             TTCEEEEEECCHHHHHHHHHHHHHHTTCHHHHHSCHHHHHTCCTTCCHHHHHHHHHHHGGGCHHHHHHHHHTTSCGGGEE
T ss_pred             CCceEEEEecCHHHHHHHHHHHHHhcCCcccccCCHHHHHHhccCCchhhhhhhhccccCchHHHHHHHHHHhCChhhEE
Confidence            8999999999999999999998765332  113467776543211          1233578999999997        8


Q ss_pred             hhhccCccCChHHHHHHHHHHhCCCcc
Q 042173           79 FLKYEDPKRDLTFCVKRLADFLGCSFS  105 (147)
Q Consensus        79 ~v~YEdL~~d~~~~v~~I~~FLG~~~~  105 (147)
                      +|+||||++||.+++++||+|||++..
T Consensus       218 ~l~yEdL~~dp~~~l~~l~~FLGl~~~  244 (325)
T 1nst_A          218 VLDGKLLRTEPAKVMDMVQKFLGVTNT  244 (325)
T ss_dssp             EEEHHHHHHCHHHHHHHHHHHHTCSSC
T ss_pred             EEEHHHHHhCHHHHHHHHHHHcCCCCc
Confidence            999999999999999999999999754


No 22 
>3ap1_A Protein-tyrosine sulfotransferase 2; sulfotransferase fold, transferase; HET: A3P; 1.90A {Homo sapiens} PDB: 3ap2_A* 3ap3_A*
Probab=99.63  E-value=1.9e-16  Score=125.41  Aligned_cols=83  Identities=13%  Similarity=0.141  Sum_probs=62.9

Q ss_pred             CCceEEEEecCchhhhHhhhhhhccCCCCCCCCHHHHHHHHhcCCCccCChHHHhhhHh--------hhhhccCccCChH
Q 042173           19 SNCGIVYLRTNPLDQFITDWQFIPRLRDLEPSRIDEAFERACCGIQSFGPIWEHYFLFF--------IFLKYEDPKRDLT   90 (147)
Q Consensus        19 p~aKiI~i~RnP~D~~vS~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~--------l~v~YEdL~~d~~   90 (147)
                      |++|+|+++|||+|+++|+|++..........++.+++..|       ..+.+++..|+        ++|+||||++||.
T Consensus       152 P~aKiI~l~RdP~dv~~S~~~~~~~~~~~~~~~~~~~l~~w-------~~~~~~~~~~~~~~~~~~~l~v~YEDL~~dP~  224 (337)
T 3ap1_A          152 PNSKFLLMVRDGRASVHSMITRKVTIAGFDLSSYRDCLTKW-------NKAIEVMYAQCMEVGKEKCLPVYYEQLVLHPR  224 (337)
T ss_dssp             TTCEEEEEECCHHHHHHHHHHHTCCBTTCCTTCHHHHHHHH-------HHHHHHHHHHHHHHCTTTEEEEEHHHHHHCHH
T ss_pred             CCCEEEEEEeCcHHHHHHHHHHhhcccCCCHHHHHHHHHHH-------HHHHHHHHHHHHhcCCCcEEEEEHHHHHhCHH
Confidence            79999999999999999999875432212223444433322       22345555554        8999999999999


Q ss_pred             HHHHHHHHHhCCCccchh
Q 042173           91 FCVKRLADFLGCSFSEGE  108 (147)
Q Consensus        91 ~~v~~I~~FLG~~~~~~~  108 (147)
                      +++++||+|||++++++.
T Consensus       225 ~~l~~I~~FLGl~~~~~~  242 (337)
T 3ap1_A          225 RSLKLILDFLGIAWSDAV  242 (337)
T ss_dssp             HHHHHHHHHHTCCCCGGG
T ss_pred             HHHHHHHHHcCCCCCHHH
Confidence            999999999999999887


No 23 
>2z6v_A Putative uncharacterized protein; sulfotransferase, unknown function; HET: PLM; 2.60A {Mycobacterium avium}
Probab=99.63  E-value=8.6e-17  Score=130.53  Aligned_cols=93  Identities=9%  Similarity=0.046  Sum_probs=71.1

Q ss_pred             CCceEEEEecCchhhhHhhhhhhccC----CCCCCCCHHHHHHHHhcCCCccCChHHHhhhHh--------hhhhccCcc
Q 042173           19 SNCGIVYLRTNPLDQFITDWQFIPRL----RDLEPSRIDEAFERACCGIQSFGPIWEHYFLFF--------IFLKYEDPK   86 (147)
Q Consensus        19 p~aKiI~i~RnP~D~~vS~y~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~--------l~v~YEdL~   86 (147)
                      |++|+|+++|||+|+++|.|++....    ......++++..+.+...   ++.+++++..||        ++|+||||+
T Consensus       264 P~akiI~l~RdP~dv~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~vl~v~YEDL~  340 (414)
T 2z6v_A          264 PDARLIWAHRDPYKATGSLCNLWRLPQSLVMNTELLDQTEMGRLAMWQ---MRYHVDRPLRARERIGDERFFHMYYHEMM  340 (414)
T ss_dssp             TTCEEEEEECCHHHHHHHHHHHTHHHHHHHBCGGGCCHHHHHHHHHHH---HHHHHHHHHHHHHHHCGGGEEEEEHHHHH
T ss_pred             CCCEEEEEeCCHHHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHH---HHHHHHHHHHHHHhCCCccEEEEEHHHHh
Confidence            79999999999999999999886532    112234566655554421   344567766665        889999999


Q ss_pred             CChHHHHHHHHHHhCCCccchhhhhhHHHHHHH
Q 042173           87 RDLTFCVKRLADFLGCSFSEGEEANGVIGEISK  119 (147)
Q Consensus        87 ~d~~~~v~~I~~FLG~~~~~~~~~~~~~~~iv~  119 (147)
                      +||.+++++||+|||++++++.     ++.+.+
T Consensus       341 ~dP~~~l~rI~~FLGl~~~~~~-----~~~i~~  368 (414)
T 2z6v_A          341 RDPMDVMRRIYEWADEPLTAET-----EARMRN  368 (414)
T ss_dssp             HCHHHHHHHHHHHTTCCCCHHH-----HHHHHH
T ss_pred             hCHHHHHHHHHHHcCCCCCHHH-----HHHHHH
Confidence            9999999999999999999987     665554


No 24 
>4gbm_A CURM sulfotransferase; polyketide synthase, curacin, PAP, PAPS; HET: A3P P6G; 1.62A {Moorea producta}
Probab=99.60  E-value=2.4e-16  Score=122.93  Aligned_cols=83  Identities=18%  Similarity=0.173  Sum_probs=59.9

Q ss_pred             CCceEEEEecCchhhhHhhhhhhccCCC--CCCCCHHHHHHHHhcCCCccCChHHHhhhHh--------hhhhccCccCC
Q 042173           19 SNCGIVYLRTNPLDQFITDWQFIPRLRD--LEPSRIDEAFERACCGIQSFGPIWEHYFLFF--------IFLKYEDPKRD   88 (147)
Q Consensus        19 p~aKiI~i~RnP~D~~vS~y~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~--------l~v~YEdL~~d   88 (147)
                      |+||+|+++|||+|++.|++.+......  ....++......|.       .+.+++..|+        +.|+||||++|
T Consensus       155 P~ak~I~~~RdP~d~~~S~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~v~YEdL~~~  227 (323)
T 4gbm_A          155 ANSKYIYLVRHPYSVIESFVRMRMQKLVGLGEENPYRVAEQVWA-------KSNQNILNFLSQLEPERQHQIRYEDLVKK  227 (323)
T ss_dssp             ESCEEEEEECCHHHHHHHHHHTTGGGGGTCSSSCHHHHHHHHHH-------HHHHHHHHHHTTSCGGGEEEEEHHHHHHS
T ss_pred             CCCEEEEeecCHHHHHHHHHHHHhcccccccccccHHHHHHHHH-------HHHHHHHHHHHHcCccchhhhhHHHHHHC
Confidence            6999999999999999999876432211  11122222222221       2334444544        78999999999


Q ss_pred             hHHHHHHHHHHhCCCccchh
Q 042173           89 LTFCVKRLADFLGCSFSEGE  108 (147)
Q Consensus        89 ~~~~v~~I~~FLG~~~~~~~  108 (147)
                      |.+++++||+|||++++++.
T Consensus       228 p~~~~~~i~~fLgl~~~~~~  247 (323)
T 4gbm_A          228 PQQVLSQLCDFLNVPFEPEL  247 (323)
T ss_dssp             HHHHHHHHHHHHTCCCCGGG
T ss_pred             HHHHHHHHHHHhCCCCCHHH
Confidence            99999999999999999987


No 25 
>4gox_A Polyketide synthase; olefin synthase, hydrocarbon, sulfotran PAPS, PAP, 3'phosphoadenosine-5'phosphosulfate, transferase; HET: A3P; 2.15A {Synechococcus SP}
Probab=99.60  E-value=2.9e-16  Score=121.77  Aligned_cols=83  Identities=17%  Similarity=0.116  Sum_probs=58.3

Q ss_pred             CCceEEEEecCchhhhHhhhhhhccCCC--CCCCCHHHHHHHHhcCCCccCChHHHhhhHh--------hhhhccCccCC
Q 042173           19 SNCGIVYLRTNPLDQFITDWQFIPRLRD--LEPSRIDEAFERACCGIQSFGPIWEHYFLFF--------IFLKYEDPKRD   88 (147)
Q Consensus        19 p~aKiI~i~RnP~D~~vS~y~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~--------l~v~YEdL~~d   88 (147)
                      |+||+|+|+|||+|++.|++........  .....+......       +..+..++..|+        +.|+||||++|
T Consensus       147 P~ak~I~~~RdP~d~~~S~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~v~YEdL~~d  219 (313)
T 4gox_A          147 DQAKYIHLVRHPYAVIESFTRLRMDKLLGAEQQNPYALAESI-------WRTSNRNILDLGRTVGADRYLQVIYEDLVRD  219 (313)
T ss_dssp             SSEEEEEEECCHHHHHHHHHHTTCC--------CHHHHHHHH-------HHHHHHHHHHHHHHSCTTSEEEEEHHHHHHC
T ss_pred             CCCEEEEEEeChHHHHHHHHHhhhcccccccccchHHHHHHH-------HHHHHHHHHHHHHhhcccceeeeeHHHHHHC
Confidence            7999999999999999999875432111  111111111111       122344555554        88999999999


Q ss_pred             hHHHHHHHHHHhCCCccchh
Q 042173           89 LTFCVKRLADFLGCSFSEGE  108 (147)
Q Consensus        89 ~~~~v~~I~~FLG~~~~~~~  108 (147)
                      |.+++++||+|||+++++++
T Consensus       220 p~~~~~~i~~fLgl~~~~~~  239 (313)
T 4gox_A          220 PRKVLTNICDFLGVDFDEAL  239 (313)
T ss_dssp             HHHHHHHHHHHHTCCCCGGG
T ss_pred             HHHHHHHHHHHhCCCCCHHH
Confidence            99999999999999999987


No 26 
>1tex_A STF0 sulfotransferase; sulfolipid, sulfation, TREH trehalose-2-sulfate; HET: TRE; 2.60A {Mycobacterium smegmatis} SCOP: c.37.1.5
Probab=99.09  E-value=6.6e-11  Score=91.82  Aligned_cols=85  Identities=15%  Similarity=0.146  Sum_probs=53.3

Q ss_pred             CC-ceEEEEec-CchhhhHhhhhhhcc--CCC--------CCCCCHHHHHHHHhcCCCccCChHHHhhhHh-------hh
Q 042173           19 SN-CGIVYLRT-NPLDQFITDWQFIPR--LRD--------LEPSRIDEAFERACCGIQSFGPIWEHYFLFF-------IF   79 (147)
Q Consensus        19 p~-aKiI~i~R-nP~D~~vS~y~~~~~--~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~-------l~   79 (147)
                      |+ +|+|++.| ||+|.++|++.....  +..        ....++.+....+..    +-.+..+...+.       +.
T Consensus       153 p~~ak~I~l~Rrdpl~~~vS~~~a~~~~~w~~~~~~~~~~~~~~d~~~i~~y~~~----~~~~~~~w~~~f~~~~~~~l~  228 (287)
T 1tex_A          153 GSDPVLIHIHRPDVVSQAVSFWRAVQTRVWRGRPDPVRDARAEYHAGAIAHVITM----LRAQEEGWRAWFTEENVEPID  228 (287)
T ss_dssp             TSCCEEEECBCCCHHHHHHHHHHHHHHCCCC---------CCCCCHHHHHHHHHH----HHHHHHHHHHHHHHTTCCCBC
T ss_pred             CCCcEEEEEEcCCcHHHHHHHHHHHhcCceeccCCCccccccccCHHHHHHHHHH----HHHHHHHHHHHHHhcCCceEE
Confidence            56 99999998 999999999873321  110        111222322221100    000111112222       68


Q ss_pred             hhccCccCChHHHHHHHHHHhCCCccch
Q 042173           80 LKYEDPKRDLTFCVKRLADFLGCSFSEG  107 (147)
Q Consensus        80 v~YEdL~~d~~~~v~~I~~FLG~~~~~~  107 (147)
                      |.||||++||.+++++|++|||++++.+
T Consensus       229 v~YEDLv~dP~~~l~~l~~FLGl~~~~~  256 (287)
T 1tex_A          229 VDYPYLWRNLTEVVGTVLEALGQDPRLA  256 (287)
T ss_dssp             CBHHHHHHHHHHHHHHHHHHTTSCTTCC
T ss_pred             EEHHHHHhCHHHHHHHHHHHhCCCcccc
Confidence            9999999999999999999999998764


No 27 
>3f5f_A Maltose-binding periplasmic protein, heparan sulfate 2-O-sulfotransferase 1; maltose binding protein, fusion, heparan sulfate biosynthesis; HET: GLC A3P; 2.65A {Escherichia coli k-12}
Probab=95.73  E-value=0.011  Score=49.92  Aligned_cols=39  Identities=10%  Similarity=0.210  Sum_probs=29.8

Q ss_pred             CceEEEEecCchhhhHhhhhhhccCC----C------CCCCCHHHHHHH
Q 042173           20 NCGIVYLRTNPLDQFITDWQFIPRLR----D------LEPSRIDEAFER   58 (147)
Q Consensus        20 ~aKiI~i~RnP~D~~vS~y~~~~~~~----~------~~~~~~~~~~~~   58 (147)
                      +..+|-++|||+|+++|+|+|.+...    .      ....++++++..
T Consensus       458 ~~~yit~lRdPv~R~~S~y~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~  506 (658)
T 3f5f_A          458 KPIYINVIRDPIERLVSYYYFLRFGDDYRPGLRRRKQGDKKTFDECVAA  506 (658)
T ss_dssp             CCEEEEEECCHHHHHHHHHHHHHHCBSSSCSSCCTTCSCCCCHHHHHHT
T ss_pred             CCeEEEeecCchHHHhhhhhhhhcCcccchhhcccCccccCCHHHHHhC
Confidence            67899999999999999999986431    0      234678887753


No 28 
>2dbf_A Nuclear factor NF-kappa-B P105 subunit; apoptosis, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=36.44  E-value=56  Score=20.69  Aligned_cols=42  Identities=10%  Similarity=0.020  Sum_probs=33.4

Q ss_pred             cCccCChHHHHHHHHHHhCCCccchhhhhhHHHHHHHhcChhHHhhh
Q 042173           83 EDPKRDLTFCVKRLADFLGCSFSEGEEANGVIGEISKLCSFDNIKGL  129 (147)
Q Consensus        83 EdL~~d~~~~v~~I~~FLG~~~~~~~~~~~~~~~iv~~~sf~~mk~~  129 (147)
                      .||.+=+..+.++||..|..+-....     -..++++-.|+++.+.
T Consensus         7 ~~l~~L~~~~r~kL~~lLd~~~~~~d-----Wr~LAe~Lg~~~li~~   48 (100)
T 2dbf_A            7 GDMKQLAEDVKLQLYKLLEIPDPDKN-----WATLAQKLGLGILNNA   48 (100)
T ss_dssp             CSCTTSCHHHHHHHHHHHTSCCTTSS-----HHHHHHHHTCGGGHHH
T ss_pred             chhhhCCHHHHHHHHHHhCCCCCCCC-----HHHHHHHHCcHHHHHH
Confidence            46777788999999999997755455     8888888888887654


No 29 
>3t76_A VANU, transcriptional regulator vanug; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.12A {Enterococcus faecalis} PDB: 3t75_A* 3tyr_A* 3tys_A*
Probab=35.75  E-value=31  Score=21.01  Aligned_cols=27  Identities=15%  Similarity=0.378  Sum_probs=19.0

Q ss_pred             hhccCccCChHHHHHHHHHHhCCCccc
Q 042173           80 LKYEDPKRDLTFCVKRLADFLGCSFSE  106 (147)
Q Consensus        80 v~YEdL~~d~~~~v~~I~~FLG~~~~~  106 (147)
                      -+||.=..-....+.+||+.||+++++
T Consensus        55 s~iE~G~~~s~~~l~kIa~~L~v~~~~   81 (88)
T 3t76_A           55 AKLGKNENVSLTVLLAICEYLNCDFGD   81 (88)
T ss_dssp             HHHHTTCCCCHHHHHHHHHHHTCCGGG
T ss_pred             HHHHcCCCcCHHHHHHHHHHHCcCHHH
Confidence            344443333578899999999998754


No 30 
>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}
Probab=34.82  E-value=40  Score=20.75  Aligned_cols=27  Identities=19%  Similarity=0.000  Sum_probs=21.1

Q ss_pred             HHHHHHHHHHhCCCccchhhhhhHHHHHHHhc
Q 042173           90 TFCVKRLADFLGCSFSEGEEANGVIGEISKLC  121 (147)
Q Consensus        90 ~~~v~~I~~FLG~~~~~~~~~~~~~~~iv~~~  121 (147)
                      ..+++.++.-||..+++++     ++++++..
T Consensus        55 ~~El~~~l~~lg~~~~~~e-----i~~l~~~~   81 (100)
T 2lv7_A           55 KQELGTAMRSLGYMPNEVE-----LEVIIQRL   81 (100)
T ss_dssp             HHHHHHHHHHHTCCCCTTT-----HHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCHHH-----HHHHHHHH
Confidence            3456778888999999998     88887653


No 31 
>1taf_B TFIID TBP associated factor 62; transcription initiation, histone fold, complex (TWO transcr factors); 2.00A {Drosophila melanogaster} SCOP: a.22.1.3
Probab=33.00  E-value=33  Score=20.37  Aligned_cols=23  Identities=17%  Similarity=0.226  Sum_probs=18.9

Q ss_pred             cCChHHHHHHHHHHhCCC-ccchh
Q 042173           86 KRDLTFCVKRLADFLGCS-FSEGE  108 (147)
Q Consensus        86 ~~d~~~~v~~I~~FLG~~-~~~~~  108 (147)
                      ..=|.+.|++|++=+|++ ++++.
T Consensus         5 s~lp~~~v~~iaes~Gi~~lsdda   28 (70)
T 1taf_B            5 SSISAESMKVIAESIGVGSLSDDA   28 (70)
T ss_dssp             CCCCHHHHHHHHHHTTCCCBCHHH
T ss_pred             ccCCHHHHHHHHHHCCCCCCCHHH
Confidence            455889999999999995 77765


No 32 
>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C
Probab=32.69  E-value=40  Score=22.40  Aligned_cols=27  Identities=19%  Similarity=0.459  Sum_probs=22.7

Q ss_pred             HHHHHHHHHHhCCCccchhhhhhHHHHHHHhc
Q 042173           90 TFCVKRLADFLGCSFSEGEEANGVIGEISKLC  121 (147)
Q Consensus        90 ~~~v~~I~~FLG~~~~~~~~~~~~~~~iv~~~  121 (147)
                      ..++++++.-+|.++++++     ++.+++.+
T Consensus       104 ~~el~~~l~~~g~~ls~~e-----~~~l~~~~  130 (159)
T 3i5g_C          104 SAEIRNVLKMLGERITEDQ-----CNDIFTFC  130 (159)
T ss_dssp             HHHHHHHHHHSSSCCCHHH-----HHHHHHHT
T ss_pred             HHHHHHHHHHhCCCCCHHH-----HHHHHHHh
Confidence            5667889999999999999     88888755


No 33 
>3omt_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 1.65A {Cytophaga hutchinsonii}
Probab=32.43  E-value=40  Score=18.97  Aligned_cols=28  Identities=14%  Similarity=0.062  Sum_probs=20.1

Q ss_pred             hhhccCccCCh-HHHHHHHHHHhCCCccc
Q 042173           79 FLKYEDPKRDL-TFCVKRLADFLGCSFSE  106 (147)
Q Consensus        79 ~v~YEdL~~d~-~~~v~~I~~FLG~~~~~  106 (147)
                      +-+||.=...| ...+.+||++||++++.
T Consensus        38 is~~e~g~~~~~~~~l~~ia~~l~v~~~~   66 (73)
T 3omt_A           38 VSKWCTNDVQPSLETLFDIAEALNVDVRE   66 (73)
T ss_dssp             HHHHHTTSSCCCHHHHHHHHHHHTSCGGG
T ss_pred             HHHHHcCCCCCCHHHHHHHHHHHCcCHHH
Confidence            44555544445 78899999999998654


No 34 
>2ewt_A BLDD, putative DNA-binding protein; the DNA-binding domain of BLDD; 1.81A {Streptomyces coelicolor}
Probab=32.12  E-value=32  Score=19.07  Aligned_cols=28  Identities=32%  Similarity=0.453  Sum_probs=19.8

Q ss_pred             hhhccCccCCh-HHHHHHHHHHhCCCccc
Q 042173           79 FLKYEDPKRDL-TFCVKRLADFLGCSFSE  106 (147)
Q Consensus        79 ~v~YEdL~~d~-~~~v~~I~~FLG~~~~~  106 (147)
                      +-+||.=..+| ...+.+||+.||++++.
T Consensus        40 i~~~e~g~~~~~~~~l~~la~~l~v~~~~   68 (71)
T 2ewt_A           40 VGSYERGDRAVTVQRLAELADFYGVPVQE   68 (71)
T ss_dssp             HHHHHHTCSCCCHHHHHHHHHHHTSCGGG
T ss_pred             HHHHHCCCCCCCHHHHHHHHHHHCcCHHH
Confidence            34455544555 67899999999998653


No 35 
>2keb_A DNA polymerase subunit alpha B; DNA polymerase alpha, DNA replication, nucleus, phosphoprote binding protein; HET: DNA; NMR {Homo sapiens}
Probab=30.68  E-value=49  Score=21.17  Aligned_cols=33  Identities=15%  Similarity=0.198  Sum_probs=23.2

Q ss_pred             HHHHHHHHHHhCCCccchhhhhhHHHHHHHhcChhHHh
Q 042173           90 TFCVKRLADFLGCSFSEGEEANGVIGEISKLCSFDNIK  127 (147)
Q Consensus        90 ~~~v~~I~~FLG~~~~~~~~~~~~~~~iv~~~sf~~mk  127 (147)
                      .+.+++=++=+|++.+++.     +++.+|.|.--+..
T Consensus        28 ae~L~eEfdefGi~~~d~V-----ldKc~ELC~~y~ld   60 (101)
T 2keb_A           28 AQQLAEELQIFGLDCEEAL-----IEKLVELCVQYGQN   60 (101)
T ss_dssp             HHHHHHHHHHHTCBCCHHH-----HHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHcCCCCCHHH-----HHHHHHHHHHcCCC
Confidence            4556666667888888877     88888877544443


No 36 
>2jx3_A Protein DEK; alpha helix, SAF/SAP motif, DNA binding, chromosomal rearrangement, DNA-binding, nucleus, phosphorylation, proto oncogene; NMR {Homo sapiens}
Probab=26.53  E-value=34  Score=22.90  Aligned_cols=33  Identities=15%  Similarity=0.098  Sum_probs=18.6

Q ss_pred             ccCChHHHHHHHHHHhCCCccchhhhhhHHHHHHH
Q 042173           85 PKRDLTFCVKRLADFLGCSFSEGEEANGVIGEISK  119 (147)
Q Consensus        85 L~~d~~~~v~~I~~FLG~~~~~~~~~~~~~~~iv~  119 (147)
                      |.+=....+..+|+.||++.+..  ++.++++|++
T Consensus        72 l~K~~~~~L~~~c~iL~l~~~g~--keelv~ril~  104 (131)
T 2jx3_A           72 LKKFRNAMLKSICEVLDLERSGV--NSELVKRILN  104 (131)
T ss_dssp             HHHHHHHHHHHHHHTTTCCSCSC--HHHHHHHHHH
T ss_pred             HHccCHHHHHHHHHHHCCCCCCc--HHHHHHHHHH
Confidence            34445666777777777776532  2333555544


No 37 
>3b7h_A Prophage LP1 protein 11; structural genomics, PSI2, MCSG, protein structure initiative, midwest center for structural genomics; 2.00A {Lactobacillus plantarum WCFS1}
Probab=26.47  E-value=30  Score=19.61  Aligned_cols=27  Identities=11%  Similarity=0.133  Sum_probs=18.7

Q ss_pred             hhhccCccC-Ch-HHHHHHHHHHhCCCcc
Q 042173           79 FLKYEDPKR-DL-TFCVKRLADFLGCSFS  105 (147)
Q Consensus        79 ~v~YEdL~~-d~-~~~v~~I~~FLG~~~~  105 (147)
                      +-+||.=.. .| ...+.+||+.||++++
T Consensus        37 i~~~e~g~~~~~~~~~l~~ia~~l~~~~~   65 (78)
T 3b7h_A           37 VNAMFEGRSKRPTITTIRKVCGTLGISVH   65 (78)
T ss_dssp             HHHHHCTTCCCCCHHHHHHHHHHHTCCHH
T ss_pred             HHHHHcCCCCCCCHHHHHHHHHHcCCCHH
Confidence            344554444 44 6789999999999854


No 38 
>3qwg_A ESX-1 secretion-associated regulator ESPR; N-terminal helix-turn-helix motif, transcription factor, transcription; 1.99A {Mycobacterium tuberculosis} PDB: 3qf3_A 3qyx_A
Probab=26.01  E-value=32  Score=22.41  Aligned_cols=26  Identities=15%  Similarity=0.197  Sum_probs=19.4

Q ss_pred             hhccCccC-Ch-HHHHHHHHHHhCCCcc
Q 042173           80 LKYEDPKR-DL-TFCVKRLADFLGCSFS  105 (147)
Q Consensus        80 v~YEdL~~-d~-~~~v~~I~~FLG~~~~  105 (147)
                      -.+|-=++ +| ...+.+||++||++.+
T Consensus        47 s~iE~G~r~~Ps~~~l~~iA~~f~V~~~   74 (123)
T 3qwg_A           47 SQLRSGNRTNPSGATMAALANFFRIKAA   74 (123)
T ss_dssp             HHHHHTSSCCCCHHHHHHHHHHTTSCTH
T ss_pred             HHHHcCCCCCCCHHHHHHHHHHhCCCHH
Confidence            34554454 66 6899999999999954


No 39 
>3r1f_A ESX-1 secretion-associated regulator ESPR; helix-turn-helix, transcription factor, helix-turn-helix transcription factor; 2.50A {Mycobacterium tuberculosis}
Probab=25.48  E-value=34  Score=22.63  Aligned_cols=26  Identities=15%  Similarity=0.197  Sum_probs=19.3

Q ss_pred             hhccCccC-Ch-HHHHHHHHHHhCCCcc
Q 042173           80 LKYEDPKR-DL-TFCVKRLADFLGCSFS  105 (147)
Q Consensus        80 v~YEdL~~-d~-~~~v~~I~~FLG~~~~  105 (147)
                      -.||-=++ +| ...+.+||++||++.+
T Consensus        49 s~~E~G~r~~Ps~~~l~~iA~~f~V~~~   76 (135)
T 3r1f_A           49 SQLRSGNRTNPSGATMAALANFFRIKAA   76 (135)
T ss_dssp             HHHHHTSSCCCCHHHHHHHHHHHTSCTH
T ss_pred             HHHHCCCCCCCCHHHHHHHHHHhCCCHH
Confidence            34555454 66 6899999999999943


No 40 
>1y7y_A C.AHDI; helix-turn-helix, DNA-binding protein, transcriptional regulator, transcription regulator; 1.69A {Aeromonas hydrophila} SCOP: a.35.1.3
Probab=25.30  E-value=61  Score=17.91  Aligned_cols=29  Identities=21%  Similarity=0.143  Sum_probs=20.8

Q ss_pred             hhhhccCccCCh-HHHHHHHHHHhCCCccc
Q 042173           78 IFLKYEDPKRDL-TFCVKRLADFLGCSFSE  106 (147)
Q Consensus        78 l~v~YEdL~~d~-~~~v~~I~~FLG~~~~~  106 (147)
                      .+-+||.=...| ...+.+||+.||++.+.
T Consensus        42 ~i~~~e~g~~~~~~~~l~~l~~~l~~~~~~   71 (74)
T 1y7y_A           42 YVGGVERGQRNVSLVNILKLATALDIEPRE   71 (74)
T ss_dssp             HHHHHHTTCSCCBHHHHHHHHHHTTSCGGG
T ss_pred             HHHHHHCCCCCCCHHHHHHHHHHhCcCHHH
Confidence            344566555555 67899999999998653


No 41 
>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B
Probab=25.29  E-value=41  Score=22.18  Aligned_cols=27  Identities=30%  Similarity=0.317  Sum_probs=21.5

Q ss_pred             HHHHHHHHHHhCCCccchhhhhhHHHHHHHhc
Q 042173           90 TFCVKRLADFLGCSFSEGEEANGVIGEISKLC  121 (147)
Q Consensus        90 ~~~v~~I~~FLG~~~~~~~~~~~~~~~iv~~~  121 (147)
                      ..++++++.-+|.++++++     ++++++.+
T Consensus       104 ~~el~~~l~~~g~~ls~~e-----i~~~~~~~  130 (153)
T 3i5g_B          104 EDYLKDLLENMGDNFSKEE-----IKNVWKDA  130 (153)
T ss_dssp             HHHHHHHHHSSSSCCCHHH-----HHHHHTTC
T ss_pred             HHHHHHHHHHcCCcCCHHH-----HHHHHHHh
Confidence            5677888888898888888     88887654


No 42 
>2xi8_A Putative transcription regulator; HTH DNA-binding motif; HET: GOL; 1.21A {Enterococcus faecalis} PDB: 2gzu_A 1utx_A* 2xj3_A 2xiu_A
Probab=25.06  E-value=32  Score=18.64  Aligned_cols=26  Identities=15%  Similarity=0.117  Sum_probs=17.9

Q ss_pred             hhccCccCCh-HHHHHHHHHHhCCCcc
Q 042173           80 LKYEDPKRDL-TFCVKRLADFLGCSFS  105 (147)
Q Consensus        80 v~YEdL~~d~-~~~v~~I~~FLG~~~~  105 (147)
                      -+||.=...| ...+.+||+.||++++
T Consensus        32 ~~~e~g~~~~~~~~l~~i~~~l~~~~~   58 (66)
T 2xi8_A           32 NGIEKNKYNPSLQLALKIAYYLNTPLE   58 (66)
T ss_dssp             HHHHTTSCCCCHHHHHHHHHHTTSCHH
T ss_pred             HHHHcCCCCCCHHHHHHHHHHHCcCHH
Confidence            3444444444 6778999999999754


No 43 
>4e2i_2 DNA polymerase alpha subunit B; replication initiation, hydrolase-DNA binding complex, hydro binding protein complex; HET: DNA; 5.00A {Homo sapiens}
Probab=25.03  E-value=53  Score=20.01  Aligned_cols=28  Identities=18%  Similarity=0.267  Sum_probs=21.1

Q ss_pred             HHHHHHHHHhCCCccchhhhhhHHHHHHHhcCh
Q 042173           91 FCVKRLADFLGCSFSEGEEANGVIGEISKLCSF  123 (147)
Q Consensus        91 ~~v~~I~~FLG~~~~~~~~~~~~~~~iv~~~sf  123 (147)
                      +.+++=++.+|++.+++.     +++.++.|.-
T Consensus         6 e~l~~el~~Fgi~c~d~v-----~eKl~ElC~~   33 (78)
T 4e2i_2            6 QQLAEELQIFGLDCEEAL-----IEKLVELCVQ   33 (78)
T ss_dssp             HHHHHHHHHTTCCCCHHH-----HHHHHTHHHH
T ss_pred             HHHHHHHHHcCCCCcHHH-----HHHHHHHHHH
Confidence            455566678899988877     9999887743


No 44 
>3kz3_A Repressor protein CI; five helix bundle, DNA-binding, transcription, transcription regulation; 1.64A {Enterobacteria phage lambda}
Probab=24.86  E-value=63  Score=18.51  Aligned_cols=29  Identities=21%  Similarity=0.170  Sum_probs=21.1

Q ss_pred             hhhhccCccCCh-HHHHHHHHHHhCCCccc
Q 042173           78 IFLKYEDPKRDL-TFCVKRLADFLGCSFSE  106 (147)
Q Consensus        78 l~v~YEdL~~d~-~~~v~~I~~FLG~~~~~  106 (147)
                      .+-.||.=...| ...+.+||+.||++.++
T Consensus        41 ~is~~e~g~~~~~~~~~~~ia~~l~v~~~~   70 (80)
T 3kz3_A           41 AVAALFNGINALNAYNAALLAKILKVSVEE   70 (80)
T ss_dssp             HHHHHHTTSSCCCHHHHHHHHHHHTSCGGG
T ss_pred             HHHHHHcCCCCCCHHHHHHHHHHhCCCHHH
Confidence            344566555554 68899999999998654


No 45 
>3bs3_A Putative DNA-binding protein; XRE-family, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.65A {Bacteroides fragilis}
Probab=24.46  E-value=66  Score=17.89  Aligned_cols=28  Identities=11%  Similarity=0.139  Sum_probs=19.8

Q ss_pred             hhhccCccCCh-HHHHHHHHHHhCCCccc
Q 042173           79 FLKYEDPKRDL-TFCVKRLADFLGCSFSE  106 (147)
Q Consensus        79 ~v~YEdL~~d~-~~~v~~I~~FLG~~~~~  106 (147)
                      +-+||.=...| ...+.+||++||++++.
T Consensus        40 i~~~e~g~~~~~~~~l~~ia~~l~~~~~~   68 (76)
T 3bs3_A           40 ISRWCSNKSQPSLDMLVKVAELLNVDPRQ   68 (76)
T ss_dssp             HHHHHTTSSCCCHHHHHHHHHHHTSCGGG
T ss_pred             HHHHHcCCCCCCHHHHHHHHHHHCcCHHH
Confidence            34555544455 77899999999998654


No 46 
>1zug_A Phage 434 CRO protein; gene regulating protein, transcription regulation; NMR {Phage 434} SCOP: a.35.1.2 PDB: 2cro_A 3cro_L*
Probab=23.69  E-value=18  Score=20.19  Aligned_cols=27  Identities=15%  Similarity=0.017  Sum_probs=17.8

Q ss_pred             hhhccCccCChHHHHHHHHHHhCCCcc
Q 042173           79 FLKYEDPKRDLTFCVKRLADFLGCSFS  105 (147)
Q Consensus        79 ~v~YEdL~~d~~~~v~~I~~FLG~~~~  105 (147)
                      +-+||.=...|...+.+||++||++.+
T Consensus        33 i~~~e~g~~~~~~~l~~i~~~l~~~~~   59 (71)
T 1zug_A           33 IQLIEAGVTKRPRFLFEIAMALNCDPV   59 (71)
T ss_dssp             HHHHHTTCCSSCSTHHHHHHHTTSCHH
T ss_pred             HHHHHcCCCCChHHHHHHHHHHCCCHH
Confidence            344554444455559999999999754


No 47 
>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5
Probab=23.15  E-value=86  Score=16.50  Aligned_cols=26  Identities=12%  Similarity=0.006  Sum_probs=17.7

Q ss_pred             HHHHHHHHHHhCCCccchhhhhhHHHHHHHh
Q 042173           90 TFCVKRLADFLGCSFSEGEEANGVIGEISKL  120 (147)
Q Consensus        90 ~~~v~~I~~FLG~~~~~~~~~~~~~~~iv~~  120 (147)
                      ..++++++.-+|.++++++     ++.+.+.
T Consensus        20 ~~el~~~l~~~~~~~~~~~-----~~~~~~~   45 (67)
T 1tiz_A           20 LDEFREVALAFSPYFTQED-----IVKFFEE   45 (67)
T ss_dssp             HHHHHHHHHHTCTTSCHHH-----HHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCHHH-----HHHHHHH
Confidence            3455667777788877777     7776654


No 48 
>2jvl_A TRMBF1; coactivator, helix-turn-helix, Pro binding, transcription; NMR {Trichoderma reesei}
Probab=22.71  E-value=62  Score=20.09  Aligned_cols=30  Identities=10%  Similarity=0.159  Sum_probs=23.3

Q ss_pred             hhhhccCccCCh-HHHHHHHHHHhCCCccch
Q 042173           78 IFLKYEDPKRDL-TFCVKRLADFLGCSFSEG  107 (147)
Q Consensus        78 l~v~YEdL~~d~-~~~v~~I~~FLG~~~~~~  107 (147)
                      .+-+||.=...| ...+.+||++||+++++.
T Consensus        65 ~is~~E~G~~~p~~~~l~~ia~~l~v~~~e~   95 (107)
T 2jvl_A           65 TVASYERGTATPDQNILSKMERVLNVKLRGA   95 (107)
T ss_dssp             HHHHHTTTCSCCCHHHHHHHHHTTTCBSSSS
T ss_pred             HHHHHHcCCCCCCHHHHHHHHHHHCcCHhhh
Confidence            455677666666 678999999999998763


No 49 
>1nro_R Receptor based peptide NRP; serine proteinase/receptor; 3.10A {Homo sapiens}
Probab=22.70  E-value=21  Score=16.71  Aligned_cols=13  Identities=31%  Similarity=0.496  Sum_probs=8.3

Q ss_pred             EEecCchhhhHhh
Q 042173           25 YLRTNPLDQFITD   37 (147)
Q Consensus        25 ~i~RnP~D~~vS~   37 (147)
                      +++|||-|-.--+
T Consensus         6 fllrnpndkyepf   18 (27)
T 1nro_R            6 FLLRNPNDKYEPF   18 (27)
T ss_pred             ccccCCCcccCcc
Confidence            4678888764333


No 50 
>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}
Probab=22.11  E-value=85  Score=19.37  Aligned_cols=52  Identities=17%  Similarity=0.299  Sum_probs=37.6

Q ss_pred             CCCCCHHHHHHHHhcCCCccCChHHHhhhHhhhhhccCccCChHHHHHHHHH-----------HhCCCccchhhhhhHHH
Q 042173           47 LEPSRIDEAFERACCGIQSFGPIWEHYFLFFIFLKYEDPKRDLTFCVKRLAD-----------FLGCSFSEGEEANGVIG  115 (147)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~l~v~YEdL~~d~~~~v~~I~~-----------FLG~~~~~~~~~~~~~~  115 (147)
                      ..+.+|++.+++.+.                 .=.+||+.+|-.+-+..+-+           |.|..++.++     .+
T Consensus        15 G~~L~W~eLIeQML~-----------------~en~~ei~kDr~~Fl~~~e~F~FkCP~CgEEFyG~~Lp~~E-----ae   72 (95)
T 2k5c_A           15 GSPLKWEELIEEMLI-----------------IENFEEIVKDRERFLAQVEEFVFKCPVCGEEFYGKTLPRRE-----AE   72 (95)
T ss_dssp             CCEECHHHHHHHSTT-----------------CSTHHHHTTCHHHHHHHHHHSEEECTTTCCEEETTSSCTTT-----HH
T ss_pred             CCccCHHHHHHHHHh-----------------hccHHHHHhhHHHHHHHHHHHhhcCCCccHHHhcccCChHH-----HH
Confidence            446788888886542                 12578999999999888876           5577777777     77


Q ss_pred             HHHHh
Q 042173          116 EISKL  120 (147)
Q Consensus       116 ~iv~~  120 (147)
                      ++-+.
T Consensus        73 KVFEL   77 (95)
T 2k5c_A           73 KVFEL   77 (95)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            77653


No 51 
>1nrp_R Receptor based peptide NR'S; serine proteinase/receptor; 3.00A {Homo sapiens} PDB: 1nrn_R 1nrq_R*
Probab=21.84  E-value=17  Score=16.81  Aligned_cols=10  Identities=40%  Similarity=0.879  Sum_probs=6.7

Q ss_pred             EEecCchhhh
Q 042173           25 YLRTNPLDQF   34 (147)
Q Consensus        25 ~i~RnP~D~~   34 (147)
                      +++|||-|-.
T Consensus         6 fllrnpndky   15 (26)
T 1nrp_R            6 FLLRNPNDKY   15 (26)
T ss_pred             hhhcCCCccc
Confidence            3678887753


No 52 
>3r3p_A MobIle intron protein; homing endonuclease, hydrolase; 2.20A {Bacillus phage 0305phi8-36}
Probab=21.71  E-value=25  Score=22.39  Aligned_cols=23  Identities=9%  Similarity=0.245  Sum_probs=20.1

Q ss_pred             hhhhccCccCChHHHHHHHHHHhC
Q 042173           78 IFLKYEDPKRDLTFCVKRLADFLG  101 (147)
Q Consensus        78 l~v~YEdL~~d~~~~v~~I~~FLG  101 (147)
                      +.+..+|+ +|+.+.+.+|.++|.
T Consensus        76 lr~~~~~v-~~~~~v~~~I~~~l~   98 (105)
T 3r3p_A           76 LTIEDDEL-NDIDKVKQQIQKFWV   98 (105)
T ss_dssp             EEEEGGGG-GGHHHHHHHHHHHHH
T ss_pred             EEEeHHHh-CCHHHHHHHHHHHHH
Confidence            66778888 999999999999885


No 53 
>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}
Probab=20.86  E-value=91  Score=17.06  Aligned_cols=26  Identities=23%  Similarity=0.128  Sum_probs=17.8

Q ss_pred             HHHHHHHHHHhCCCccchhhhhhHHHHHHHh
Q 042173           90 TFCVKRLADFLGCSFSEGEEANGVIGEISKL  120 (147)
Q Consensus        90 ~~~v~~I~~FLG~~~~~~~~~~~~~~~iv~~  120 (147)
                      ..++++++.-+|.++++++     ++.++..
T Consensus        26 ~~el~~~l~~~g~~~~~~~-----~~~~~~~   51 (77)
T 2joj_A           26 YHELKVAMRALGFDVKKPE-----ILELMNE   51 (77)
T ss_dssp             HHHHHHHHHHHTCCCHHHH-----HHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCHHH-----HHHHHHH
Confidence            4556667777788877777     7776654


No 54 
>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}
Probab=20.85  E-value=94  Score=17.83  Aligned_cols=26  Identities=15%  Similarity=0.206  Sum_probs=17.3

Q ss_pred             HHHHHHHHHHhCCCccchhhhhhHHHHHHHh
Q 042173           90 TFCVKRLADFLGCSFSEGEEANGVIGEISKL  120 (147)
Q Consensus        90 ~~~v~~I~~FLG~~~~~~~~~~~~~~~iv~~  120 (147)
                      ..++++++.-+|.++++++     ++.++..
T Consensus        28 ~~el~~~l~~~g~~~~~~~-----~~~l~~~   53 (92)
T 2kn2_A           28 ASELRHVMINLGEKLTDEE-----VEQMIKE   53 (92)
T ss_dssp             HHHHHHHHHHTTCCCCHHH-----HHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCHHH-----HHHHHHH
Confidence            3455666777787777777     6766654


No 55 
>1r69_A Repressor protein CI; gene regulating protein; 2.00A {Phage 434} SCOP: a.35.1.2 PDB: 1pra_A 1per_L 1rpe_L* 2or1_L* 1r63_A 2r63_A 1sq8_A
Probab=20.39  E-value=25  Score=19.33  Aligned_cols=26  Identities=27%  Similarity=0.257  Sum_probs=16.8

Q ss_pred             hhccCccCChHHHHHHHHHHhCCCcc
Q 042173           80 LKYEDPKRDLTFCVKRLADFLGCSFS  105 (147)
Q Consensus        80 v~YEdL~~d~~~~v~~I~~FLG~~~~  105 (147)
                      -+||.=...|...+.+||++||++++
T Consensus        32 ~~~e~g~~~~~~~l~~la~~l~~~~~   57 (69)
T 1r69_A           32 EQLENGKTKRPRFLPELASALGVSVD   57 (69)
T ss_dssp             HHHHTTSCSSCTTHHHHHHHTTCCHH
T ss_pred             HHHHcCCCCCchHHHHHHHHHCcCHH
Confidence            34444444444448999999999754


Done!