BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042177
(123 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5UPG1|YL085_MIMIV Putative BTB/POZ domain-containing protein L85 OS=Acanthamoeba
polyphaga mimivirus GN=MIMI_L85 PE=3 SV=1
Length = 419
Score = 34.7 bits (78), Expect = 0.16, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 27/40 (67%)
Query: 83 YNNCTSTPESESESEPDPDAESESETESESESESESEPDN 122
Y++ + E SE+E + ++E+ESE SE+ESE SE ++
Sbjct: 249 YSSSNDSDEDASETESEHNSETESEHNSETESEHNSETES 288
Score = 32.7 bits (73), Expect = 0.76, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 10/60 (16%)
Query: 70 LVNATVNYATCKLY--------NNCTSTPESESESEPDPDAESE--SETESESESESESE 119
L+N N K Y +N + SE+ESE + + ESE SETESE SE+ES+
Sbjct: 230 LINVLKNTCIYKTYQSKIKYSSSNDSDEDASETESEHNSETESEHNSETESEHNSETESK 289
>sp|A7Y3K2|YCF1_IPOPU Putative membrane protein ycf1 OS=Ipomoea purpurea GN=ycf1-A PE=3
SV=1
Length = 2057
Score = 34.3 bits (77), Expect = 0.23, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 26/33 (78%)
Query: 91 ESESESEPDPDAESESETESESESESESEPDNL 123
E++SE + + D+E +SET+SE +SE++SE +L
Sbjct: 1784 ETDSEKKSETDSEKKSETDSEKKSETDSEKKSL 1816
Score = 34.3 bits (77), Expect = 0.25, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 26/39 (66%)
Query: 81 KLYNNCTSTPESESESEPDPDAESESETESESESESESE 119
K N E++SE + + D+E +SET+SE +SE++SE
Sbjct: 1758 KSKTNSEKKSETDSEKKSETDSEKKSETDSEKKSETDSE 1796
Score = 33.1 bits (74), Expect = 0.48, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 24/29 (82%)
Query: 91 ESESESEPDPDAESESETESESESESESE 119
E++SE + + D+E +SET+SE +SE++SE
Sbjct: 1776 ETDSEKKSETDSEKKSETDSEKKSETDSE 1804
Score = 32.3 bits (72), Expect = 0.79, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 26/42 (61%)
Query: 78 ATCKLYNNCTSTPESESESEPDPDAESESETESESESESESE 119
T K N ++ SE + + D+E +SET+SE +SE++SE
Sbjct: 1747 GTKKSKTNSEKKSKTNSEKKSETDSEKKSETDSEKKSETDSE 1788
Score = 31.6 bits (70), Expect = 1.5, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 26/35 (74%)
Query: 88 STPESESESEPDPDAESESETESESESESESEPDN 122
+ E +SE++ + +E++SE +SE++SE +SE D+
Sbjct: 1761 TNSEKKSETDSEKKSETDSEKKSETDSEKKSETDS 1795
Score = 31.2 bits (69), Expect = 1.7, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 25/32 (78%)
Query: 91 ESESESEPDPDAESESETESESESESESEPDN 122
E +SE++ + +E++SE +SE++SE +SE D+
Sbjct: 1772 EKKSETDSEKKSETDSEKKSETDSEKKSETDS 1803
Score = 31.2 bits (69), Expect = 1.7, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 25/32 (78%)
Query: 91 ESESESEPDPDAESESETESESESESESEPDN 122
E +SE++ + +E++SE +SE++SE +SE D+
Sbjct: 1780 EKKSETDSEKKSETDSEKKSETDSEKKSETDS 1811
Score = 30.8 bits (68), Expect = 2.7, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 25/34 (73%)
Query: 88 STPESESESEPDPDAESESETESESESESESEPD 121
S +SE +SE D + +SE+++E +SE++SE + +
Sbjct: 1767 SETDSEKKSETDSEKKSETDSEKKSETDSEKKSE 1800
Score = 30.8 bits (68), Expect = 2.7, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 25/34 (73%)
Query: 88 STPESESESEPDPDAESESETESESESESESEPD 121
S +SE +SE D + +SE+++E +SE++SE + +
Sbjct: 1775 SETDSEKKSETDSEKKSETDSEKKSETDSEKKSE 1808
Score = 30.4 bits (67), Expect = 3.3, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 24/32 (75%)
Query: 88 STPESESESEPDPDAESESETESESESESESE 119
S +SE +SE D + +SE+++E +SE++SE +
Sbjct: 1783 SETDSEKKSETDSEKKSETDSEKKSETDSEKK 1814
Score = 29.3 bits (64), Expect = 6.7, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 25/34 (73%)
Query: 88 STPESESESEPDPDAESESETESESESESESEPD 121
S +SE++SE + +SE ++E++SE +SE++ +
Sbjct: 1763 SEKKSETDSEKKSETDSEKKSETDSEKKSETDSE 1796
Score = 29.3 bits (64), Expect = 6.7, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 25/34 (73%)
Query: 88 STPESESESEPDPDAESESETESESESESESEPD 121
S +SE++SE + +SE ++E++SE +SE++ +
Sbjct: 1771 SEKKSETDSEKKSETDSEKKSETDSEKKSETDSE 1804
Score = 29.3 bits (64), Expect = 6.7, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 25/34 (73%)
Query: 88 STPESESESEPDPDAESESETESESESESESEPD 121
S +SE++SE + +SE ++E++SE +SE++ +
Sbjct: 1779 SEKKSETDSEKKSETDSEKKSETDSEKKSETDSE 1812
Score = 29.3 bits (64), Expect = 7.3, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 25/35 (71%)
Query: 88 STPESESESEPDPDAESESETESESESESESEPDN 122
+ E +S++ + +E++SE +SE++SE +SE D+
Sbjct: 1753 TNSEKKSKTNSEKKSETDSEKKSETDSEKKSETDS 1787
>sp|Q5UQG9|YR816_MIMIV Uncharacterized protein R816 OS=Acanthamoeba polyphaga mimivirus
GN=MIMI_R816 PE=4 SV=1
Length = 202
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 45 RGVSKVVTAGLGLIGNALLSPHAAPLVNATVNYATCKLYNNCTSTPESESESEPDPDAES 104
+ + + T G +G A L H V ++ + N + E ES+ E D D++
Sbjct: 123 KSILWIGTTDGGDVG-AYLYVHKTDGVIDSIIVDNNFFFGNLDTDSEQESDQESDQDSDQ 181
Query: 105 ESETESESESESESEPD 121
ESE ES+ ES+ +S+ D
Sbjct: 182 ESE-ESDQESDQDSDQD 197
>sp|C4Y1P0|DEF1_CLAL4 RNA polymerase II degradation factor 1 OS=Clavispora lusitaniae
(strain ATCC 42720) GN=DEF1 PE=3 SV=1
Length = 671
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 22/30 (73%)
Query: 90 PESESESEPDPDAESESETESESESESESE 119
PES+ E++P P+A+ ES+ E E + E+E E
Sbjct: 301 PESQPEAQPKPEAQPESQPEPEVQPEAEPE 330
>sp|Q96RN1|S26A8_HUMAN Testis anion transporter 1 OS=Homo sapiens GN=SLC26A8 PE=1 SV=1
Length = 970
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 23/31 (74%)
Query: 91 ESESESEPDPDAESESETESESESESESEPD 121
+ E E E +P AE+E++T++E E + E+EP+
Sbjct: 879 DRELEPEMEPKAETETKTQTEMEPQPETEPE 909
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.305 0.123 0.334
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,220,630
Number of Sequences: 539616
Number of extensions: 1608491
Number of successful extensions: 18428
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 374
Number of HSP's successfully gapped in prelim test: 123
Number of HSP's that attempted gapping in prelim test: 11084
Number of HSP's gapped (non-prelim): 5240
length of query: 123
length of database: 191,569,459
effective HSP length: 90
effective length of query: 33
effective length of database: 143,004,019
effective search space: 4719132627
effective search space used: 4719132627
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
S2: 55 (25.8 bits)