BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042181
(417 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O54862|MBTP2_CRIGR Membrane-bound transcription factor site-2 protease OS=Cricetulus
griseus GN=MBTPS2 PE=2 SV=1
Length = 510
Score = 38.5 bits (88), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 109/289 (37%), Gaps = 69/289 (23%)
Query: 7 PFYKQCEGTMVLDVPSTSPLSG--YLSPGDVIVSLDGIHIHNEQDWMEVAALLDKYTPQN 64
PFY G ++ +V SP G L GD++ L + N QDW E + Y PQ
Sbjct: 239 PFYYTGVGVLITEVAEDSPAIGPRGLFVGDLVTHLQDCPVTNVQDWNECLDTI-AYEPQ- 296
Query: 65 SSHSKYPGLRAADGRKGYCVSNYMIEE----SKKIQLLDNQSACPNDFTAFVTVQCFDIS 120
GYC+S +++ + + LD + C N+ + +T CF
Sbjct: 297 ---------------IGYCISASTLQQLSFPVRAYKRLDGSTECCNNHS--LTDVCF--- 336
Query: 121 ISVNVSSEGDQLNKLENVYCLNANDIVKLKKCGDGWVTSSTNGSHCVCSKEESCLTPVQL 180
S + NK + CL A V+ + TN S C+ P
Sbjct: 337 ------SYRNNFNKRLHT-CLPARKAVEATQ------VCRTNKDCKTSSSSSFCIVP--- 380
Query: 181 PGLAWVEITYSRPYSLECKQLSRSSVSDTRTTDFTDPHCGGTFVFFGDVIFMAQSVSLTQ 240
SLE + TR P ++ G + + +VS+T
Sbjct: 381 --------------SLE---------THTRLIKVKHPP-QIDMLYVGHPLHLHYTVSITS 416
Query: 241 YQPRWASSFGAYLPNILRKSLICIFHVSLTLALLNSLPAYFLDGESIFE 289
+ PR+ + LP I+ + + +S LA++N++P + LDG+ I
Sbjct: 417 FIPRF-NFLSIDLPVIVETFVKYLISLSGALAIVNAVPCFALDGQWILN 464
>sp|Q5RAC8|MBTP2_PONAB Membrane-bound transcription factor site-2 protease OS=Pongo abelii
GN=MBTPS2 PE=2 SV=1
Length = 521
Score = 35.8 bits (81), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 109/289 (37%), Gaps = 69/289 (23%)
Query: 7 PFYKQCEGTMVLDVPSTSPLSG--YLSPGDVIVSLDGIHIHNEQDWMEVAALLDKYTPQN 64
PFY G ++ +V SP G L GD++ L + N QDW E + Y PQ
Sbjct: 250 PFYYTGVGVLITEVAEDSPAIGPRGLFVGDLVTHLQDCPVTNVQDWNECLDTI-AYEPQ- 307
Query: 65 SSHSKYPGLRAADGRKGYCVSNYMIEE----SKKIQLLDNQSACPNDFTAFVTVQCFDIS 120
GYC+S +++ + + LD + C N+ + +T CF
Sbjct: 308 ---------------IGYCISASTLQQLSFPVRAYKRLDGSTECCNNHS--LTDVCF--- 347
Query: 121 ISVNVSSEGDQLNKLENVYCLNANDIVKLKKCGDGWVTSSTNGSHCVCSKEESCLTPVQL 180
S + NK + CL A V+ + TN S C+ P
Sbjct: 348 ------SYRNNFNKRLHT-CLPARKAVEATQ------VCRTNKDCKKSSSSSFCIIP--- 391
Query: 181 PGLAWVEITYSRPYSLECKQLSRSSVSDTRTTDFTDPHCGGTFVFFGDVIFMAQSVSLTQ 240
SLE + TR P ++ G + + +VS+T
Sbjct: 392 --------------SLE---------THTRLIKVKHPP-QIDMLYVGHPLHLHYTVSITS 427
Query: 241 YQPRWASSFGAYLPNILRKSLICIFHVSLTLALLNSLPAYFLDGESIFE 289
+ PR+ + LP ++ + + +S LA++N++P + LDG+ I
Sbjct: 428 FIPRF-NFLSIDLPVVVETFVKYLISLSGALAIVNAVPCFALDGQWILN 475
>sp|O43462|MBTP2_HUMAN Membrane-bound transcription factor site-2 protease OS=Homo sapiens
GN=MBTPS2 PE=1 SV=1
Length = 519
Score = 35.4 bits (80), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 109/289 (37%), Gaps = 69/289 (23%)
Query: 7 PFYKQCEGTMVLDVPSTSPLSG--YLSPGDVIVSLDGIHIHNEQDWMEVAALLDKYTPQN 64
PFY G ++ +V SP G L GD++ L + N QDW E + Y PQ
Sbjct: 248 PFYYTGVGVLITEVAEDSPAIGPRGLFVGDLVTHLQDCPVTNVQDWNECLDTI-AYEPQ- 305
Query: 65 SSHSKYPGLRAADGRKGYCVSNYMIEE----SKKIQLLDNQSACPNDFTAFVTVQCFDIS 120
GYC+S +++ + + LD + C N+ + +T CF
Sbjct: 306 ---------------IGYCISASTLQQLSFPVRAYKRLDGSTECCNNHS--LTDVCF--- 345
Query: 121 ISVNVSSEGDQLNKLENVYCLNANDIVKLKKCGDGWVTSSTNGSHCVCSKEESCLTPVQL 180
S + NK + CL A V+ + TN S C+ P
Sbjct: 346 ------SYRNNFNKRLHT-CLPARKAVEATQ------VCRTNKDCKKSSSSSFCIIP--- 389
Query: 181 PGLAWVEITYSRPYSLECKQLSRSSVSDTRTTDFTDPHCGGTFVFFGDVIFMAQSVSLTQ 240
SLE + TR P ++ G + + +VS+T
Sbjct: 390 --------------SLE---------THTRLIKVKHPP-QIDMLYVGHPLHLHYTVSITS 425
Query: 241 YQPRWASSFGAYLPNILRKSLICIFHVSLTLALLNSLPAYFLDGESIFE 289
+ PR+ + LP ++ + + +S LA++N++P + LDG+ I
Sbjct: 426 FIPRF-NFLSIDLPVVVETFVKYLISLSGALAIVNAVPCFALDGQWILN 473
>sp|Q8CHX6|MBTP2_MOUSE Membrane-bound transcription factor site-2 protease OS=Mus musculus
GN=Mbtps2 PE=2 SV=1
Length = 515
Score = 35.0 bits (79), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 109/296 (36%), Gaps = 83/296 (28%)
Query: 7 PFYKQCEGTMVLDVPSTSPLSG--YLSPGDVIVSLDGIHIHNEQDWMEVAALLDKYTPQN 64
PFY G ++ +V SP G L GD++ L + N QDW E + Y PQ
Sbjct: 244 PFYYTGVGVLITEVAEDSPAIGPRGLFVGDLVTHLQDCPVTNVQDWNECLDTI-AYEPQ- 301
Query: 65 SSHSKYPGLRAADGRKGYCVSNYMIEE----SKKIQLLDNQSACPNDFTAFVTVQCFDIS 120
GYC+S +++ + + LD + C N+ + +T CF
Sbjct: 302 ---------------IGYCISASTLQQLSFPVRAYKRLDGSTECCNNHS--LTDVCF--- 341
Query: 121 ISVNVSSEGDQLNKLENVYCLNANDIVKL-------KKCGDGWVTSSTNGSHCVCSKEES 173
S + NK + CL A V+ K C G +
Sbjct: 342 ------SYRNNFNKRLHT-CLPARKAVEATQVCRSNKDCKSG-------------ASSSF 381
Query: 174 CLTPVQLPGLAWVEITYSRPYSLECKQLSRSSVSDTRTTDFTDPHCGGTFVFFGDVIFMA 233
C+ P SLE + TR P ++ G + +
Sbjct: 382 CIVP-----------------SLE---------THTRLIKVKHPP-QIDMLYVGHPLHLH 414
Query: 234 QSVSLTQYQPRWASSFGAYLPNILRKSLICIFHVSLTLALLNSLPAYFLDGESIFE 289
+VS+T + PR+ + LP I+ + + +S LA++N++P + LDG+ I
Sbjct: 415 YTVSITSFIPRF-NFLSIDLPVIVETFVKYLISLSGALAIVNAVPCFALDGQWILN 469
>sp|Q0III2|MBTP2_BOVIN Membrane-bound transcription factor site-2 protease OS=Bos taurus
GN=MBTPS2 PE=2 SV=1
Length = 516
Score = 35.0 bits (79), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 108/289 (37%), Gaps = 69/289 (23%)
Query: 7 PFYKQCEGTMVLDVPSTSPLSG--YLSPGDVIVSLDGIHIHNEQDWMEVAALLDKYTPQN 64
PFY G ++ +V SP G L GD++ L + N QDW E + Y PQ
Sbjct: 245 PFYYTGVGVLITEVAEDSPAIGPRGLFVGDLVTHLQDCPVTNVQDWNECLDTI-TYEPQ- 302
Query: 65 SSHSKYPGLRAADGRKGYCVSNYMIEE----SKKIQLLDNQSACPNDFTAFVTVQCFDIS 120
GYC+S +++ + + LD + C N+ + +T CF
Sbjct: 303 ---------------IGYCISASTLQQLSFPVRAYKRLDGSTECCNNHS--LTDVCF--- 342
Query: 121 ISVNVSSEGDQLNKLENVYCLNANDIVKLKKCGDGWVTSSTNGSHCVCSKEESCLTPVQL 180
S + NK + CL A V+ + TN S C+ P
Sbjct: 343 ------SYRNNFNKRLHT-CLPARKAVEATQ------VCRTNKDCKKSSSSSFCIIP--- 386
Query: 181 PGLAWVEITYSRPYSLECKQLSRSSVSDTRTTDFTDPHCGGTFVFFGDVIFMAQSVSLTQ 240
SLE + TR P ++ G + + +VS+T
Sbjct: 387 --------------SLE---------THTRLIKVKHPP-QIDMLYVGHPLHLHYTVSITS 422
Query: 241 YQPRWASSFGAYLPNILRKSLICIFHVSLTLALLNSLPAYFLDGESIFE 289
+ PR+ LP ++ + + +S LA++N++P + LDG+ I
Sbjct: 423 FIPRF-KFLSIDLPVVVETFVKYLISLSGALAIVNAVPCFALDGQWILN 470
>sp|Q499N3|WDR18_RAT WD repeat-containing protein 18 OS=Rattus norvegicus GN=Wdr18 PE=2
SV=1
Length = 431
Score = 33.1 bits (74), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 87/231 (37%), Gaps = 50/231 (21%)
Query: 86 NYMIE-ESKKIQLLDNQSACPNDFTAFVT-------VQCFDISISVNVSSEGDQLNKLEN 137
NY+ E ++ L + CP T T + SI + S G+ L L
Sbjct: 60 NYICAWELQRKDQLQQKIMCPGPVTCLTTAPNGLYVLAGIAESIYLWEVSTGNLLVILSR 119
Query: 138 VYCLNANDIVKLKKCGDGWVTSSTNGSHCVCSKEESCLTPVQLPGLAW--VEITYSRPYS 195
Y D+ LK GDG SH V S + CL LAW + + P
Sbjct: 120 HY----QDVSCLKFTGDG--------SHFV-SAGKDCLV------LAWSLCSVLQADPSR 160
Query: 196 LECKQLSRSSVSDTRTTDFTDPHCGGTFVFFGDVIFMAQSVSLTQYQPRWASSFGAYLPN 255
+ L+ V T TD HCG FG + + SL Q WA S G L +
Sbjct: 161 I----LAPRHVWSQHTLPITDLHCG-----FGGPMARVATASLDQTMKLWAISSGDLLLS 211
Query: 256 ILRKSLICIFHVSLTLALLNSLPAYFLDG---ESIFEVTLCFITSLSPRQR 303
+L F + +T ++ Y G SIF+V LC + PR++
Sbjct: 212 VL-------FDMGITSVTMDLAEHYIFCGGSDGSIFQVDLC--SRPGPREQ 253
>sp|O82261|DEGP2_ARATH Protease Do-like 2, chloroplastic OS=Arabidopsis thaliana GN=DEGP2
PE=1 SV=2
Length = 607
Score = 32.0 bits (71), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 6/44 (13%)
Query: 7 PFYKQC------EGTMVLDVPSTSPLSGYLSPGDVIVSLDGIHI 44
P ++C EG +V V TS S L GDVIVS D +H+
Sbjct: 333 PALRECLKVPTNEGVLVRRVEPTSDASKVLKEGDVIVSFDDLHV 376
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.137 0.424
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 155,815,422
Number of Sequences: 539616
Number of extensions: 6264301
Number of successful extensions: 12082
Number of sequences better than 100.0: 9
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 12074
Number of HSP's gapped (non-prelim): 10
length of query: 417
length of database: 191,569,459
effective HSP length: 120
effective length of query: 297
effective length of database: 126,815,539
effective search space: 37664215083
effective search space used: 37664215083
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 62 (28.5 bits)